Query 021575
Match_columns 310
No_of_seqs 174 out of 1890
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 06:08:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021575.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021575hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o07_A Pyridoxine biosynthesis 100.0 5.5E-46 1.9E-50 332.0 20.5 276 33-308 9-289 (291)
2 2yzr_A Pyridoxal biosynthesis 100.0 3E-43 1E-47 323.1 19.1 289 21-309 3-329 (330)
3 4adt_A Pyridoxine biosynthetic 100.0 2E-40 6.8E-45 304.7 18.6 281 22-302 8-288 (297)
4 2nv1_A Pyridoxal biosynthesis 100.0 1.3E-33 4.4E-38 261.9 20.8 288 21-308 7-295 (305)
5 2zbt_A Pyridoxal biosynthesis 100.0 2.2E-29 7.4E-34 232.5 20.7 286 19-305 5-291 (297)
6 3tsm_A IGPS, indole-3-glycerol 99.9 1.5E-23 5E-28 190.3 20.5 192 36-271 72-268 (272)
7 3qja_A IGPS, indole-3-glycerol 99.9 1.2E-23 4.1E-28 191.5 18.3 197 36-276 65-266 (272)
8 1vc4_A Indole-3-glycerol phosp 99.9 3.8E-22 1.3E-26 180.1 15.7 187 36-269 59-253 (254)
9 3q58_A N-acetylmannosamine-6-p 99.9 3.6E-21 1.2E-25 171.1 20.3 195 27-273 7-228 (229)
10 1i4n_A Indole-3-glycerol phosp 99.9 5.9E-21 2E-25 171.3 20.6 190 36-271 54-249 (251)
11 4a29_A Engineered retro-aldol 99.9 1.1E-20 3.7E-25 168.1 20.6 174 44-262 65-243 (258)
12 3igs_A N-acetylmannosamine-6-p 99.9 9.8E-21 3.3E-25 168.6 20.3 195 28-274 8-229 (232)
13 1pii_A N-(5'phosphoribosyl)ant 99.8 1.3E-19 4.3E-24 175.0 17.3 218 36-297 61-283 (452)
14 1y0e_A Putative N-acetylmannos 99.7 4.9E-17 1.7E-21 143.2 17.9 192 34-273 3-222 (223)
15 3o63_A Probable thiamine-phosp 99.7 2E-17 6.7E-22 148.1 15.3 181 46-274 47-241 (243)
16 2w6r_A Imidazole glycerol phos 99.7 7.2E-17 2.4E-21 145.9 17.9 194 30-262 17-239 (266)
17 1ka9_F Imidazole glycerol phos 99.7 1.3E-16 4.6E-21 142.9 15.8 199 26-263 13-237 (252)
18 1qo2_A Molecule: N-((5-phospho 99.7 2.1E-17 7.1E-22 147.6 10.2 200 26-266 9-237 (241)
19 1thf_D HISF protein; thermophI 99.7 2.7E-16 9.3E-21 140.9 16.8 202 26-266 12-239 (253)
20 1vzw_A Phosphoribosyl isomeras 99.7 1.1E-16 3.9E-21 142.8 13.2 199 24-262 10-232 (244)
21 2y88_A Phosphoribosyl isomeras 99.7 1.1E-16 3.6E-21 142.9 10.3 197 25-261 10-234 (244)
22 4gj1_A 1-(5-phosphoribosyl)-5- 99.7 1.1E-15 3.7E-20 137.0 16.6 208 25-258 9-230 (243)
23 1yxy_A Putative N-acetylmannos 99.7 2.5E-15 8.4E-20 133.4 17.8 175 46-273 40-233 (234)
24 3bo9_A Putative nitroalkan dio 99.7 2.9E-15 9.9E-20 139.7 18.2 203 21-273 20-225 (326)
25 2gjl_A Hypothetical protein PA 99.6 6.9E-15 2.4E-19 137.1 18.2 207 21-274 9-222 (328)
26 3tdn_A FLR symmetric alpha-bet 99.6 2.2E-16 7.6E-21 141.4 7.6 181 45-264 38-241 (247)
27 2z6i_A Trans-2-enoyl-ACP reduc 99.6 1.5E-14 5.1E-19 135.2 18.7 204 22-275 7-213 (332)
28 2agk_A 1-(5-phosphoribosyl)-5- 99.6 3.4E-15 1.2E-19 135.0 13.0 203 24-257 7-243 (260)
29 3nl6_A Thiamine biosynthetic b 99.6 2.4E-14 8.3E-19 141.5 18.0 183 46-275 29-232 (540)
30 3khj_A Inosine-5-monophosphate 99.6 5.4E-14 1.8E-18 132.7 19.5 194 23-259 41-243 (361)
31 2v82_A 2-dehydro-3-deoxy-6-pho 99.6 3E-14 1E-18 124.5 16.1 174 46-275 23-203 (212)
32 1h5y_A HISF; histidine biosynt 99.6 2.9E-14 1E-18 126.8 14.7 179 46-263 37-238 (253)
33 3vnd_A TSA, tryptophan synthas 99.6 2.9E-14 9.7E-19 129.1 13.6 181 45-257 35-240 (267)
34 4fo4_A Inosine 5'-monophosphat 99.6 2.1E-13 7.3E-18 128.6 19.1 196 22-259 41-247 (366)
35 3bw2_A 2-nitropropane dioxygen 99.5 2.9E-13 1E-17 128.1 20.1 210 27-274 10-258 (369)
36 3nav_A Tryptophan synthase alp 99.5 5.4E-14 1.9E-18 127.5 14.0 181 45-257 37-242 (271)
37 3ffs_A Inosine-5-monophosphate 99.5 3E-13 1E-17 128.9 18.7 206 22-259 37-282 (400)
38 1jvn_A Glutamine, bifunctional 99.5 7.8E-14 2.7E-18 138.7 14.6 203 46-262 284-536 (555)
39 2tps_A Protein (thiamin phosph 99.5 4E-13 1.4E-17 118.2 17.0 182 46-275 35-223 (227)
40 1xi3_A Thiamine phosphate pyro 99.5 2.6E-13 9E-18 118.2 15.5 179 46-274 30-212 (215)
41 1tqj_A Ribulose-phosphate 3-ep 99.5 3.3E-14 1.1E-18 126.3 9.4 189 45-273 20-222 (230)
42 2yw3_A 4-hydroxy-2-oxoglutarat 99.5 6.4E-13 2.2E-17 116.1 17.0 169 46-272 29-201 (207)
43 1wv2_A Thiazole moeity, thiazo 99.5 1.2E-13 4E-18 122.8 12.3 169 107-277 36-241 (265)
44 1h1y_A D-ribulose-5-phosphate 99.5 4.7E-13 1.6E-17 118.5 16.2 188 45-275 22-224 (228)
45 1yad_A Regulatory protein TENI 99.5 7.7E-13 2.6E-17 116.3 16.1 180 46-276 33-216 (221)
46 3ceu_A Thiamine phosphate pyro 99.5 1.2E-13 4E-18 120.9 10.2 176 45-275 16-194 (210)
47 2fli_A Ribulose-phosphate 3-ep 99.5 2.7E-13 9.3E-18 118.8 12.4 186 45-273 19-219 (220)
48 1wa3_A 2-keto-3-deoxy-6-phosph 99.5 1E-12 3.5E-17 114.0 15.8 171 46-274 26-202 (205)
49 3f4w_A Putative hexulose 6 pho 99.5 5E-13 1.7E-17 116.4 13.6 158 81-274 41-209 (211)
50 1geq_A Tryptophan synthase alp 99.5 6.1E-14 2.1E-18 125.4 7.7 194 46-273 23-242 (248)
51 1rd5_A Tryptophan synthase alp 99.5 9.3E-13 3.2E-17 118.9 14.5 181 46-258 36-236 (262)
52 1rpx_A Protein (ribulose-phosp 99.4 4.6E-13 1.6E-17 118.4 11.9 186 45-272 26-227 (230)
53 3sr7_A Isopentenyl-diphosphate 99.4 1.8E-13 6.1E-18 129.0 9.6 189 4-257 115-312 (365)
54 2ekc_A AQ_1548, tryptophan syn 99.4 5.3E-13 1.8E-17 120.7 11.9 196 45-274 34-258 (262)
55 1qop_A Tryptophan synthase alp 99.4 7.9E-13 2.7E-17 119.9 12.2 183 45-258 34-240 (268)
56 3vkj_A Isopentenyl-diphosphate 99.4 1.9E-13 6.6E-18 129.1 7.8 249 4-309 88-365 (368)
57 3r2g_A Inosine 5'-monophosphat 99.4 1.3E-11 4.4E-16 116.0 20.0 194 19-259 34-235 (361)
58 2htm_A Thiazole biosynthesis p 99.4 1E-12 3.5E-17 117.1 11.8 170 105-277 27-232 (268)
59 2h6r_A Triosephosphate isomera 99.4 6.3E-13 2.1E-17 117.1 10.3 162 81-270 42-217 (219)
60 3tha_A Tryptophan synthase alp 99.4 1.6E-12 5.4E-17 116.3 10.5 179 45-257 31-232 (252)
61 4e38_A Keto-hydroxyglutarate-a 99.4 3.3E-11 1.1E-15 106.6 18.7 156 46-257 50-207 (232)
62 1ypf_A GMP reductase; GUAC, pu 99.4 2E-11 6.9E-16 114.1 18.4 239 18-301 37-315 (336)
63 1xm3_A Thiazole biosynthesis p 99.4 7.4E-12 2.5E-16 113.3 14.9 188 46-276 27-231 (264)
64 1ujp_A Tryptophan synthase alp 99.4 1.6E-12 5.4E-17 118.0 9.7 196 45-274 33-251 (271)
65 1vhc_A Putative KHG/KDPG aldol 99.4 5.4E-11 1.8E-15 105.0 19.3 156 46-258 33-191 (224)
66 3ovp_A Ribulose-phosphate 3-ep 99.4 5.5E-12 1.9E-16 111.7 12.7 187 46-277 21-222 (228)
67 3ajx_A 3-hexulose-6-phosphate 99.4 6.2E-12 2.1E-16 109.2 12.4 154 81-271 41-205 (207)
68 1wbh_A KHG/KDPG aldolase; lyas 99.3 4.4E-11 1.5E-15 104.9 16.8 156 46-258 32-190 (214)
69 2qjg_A Putative aldolase MJ040 99.3 2.9E-11 9.9E-16 109.5 16.0 182 37-279 39-264 (273)
70 3inp_A D-ribulose-phosphate 3- 99.3 1.5E-11 5.2E-16 109.8 13.7 185 46-274 44-245 (246)
71 1jub_A Dihydroorotate dehydrog 99.3 8.2E-12 2.8E-16 115.3 12.0 78 210-291 229-308 (311)
72 1viz_A PCRB protein homolog; s 99.3 1.7E-11 6E-16 109.0 12.7 182 37-275 15-230 (240)
73 3ctl_A D-allulose-6-phosphate 99.3 2.3E-11 7.8E-16 107.9 13.3 184 46-274 17-219 (231)
74 1mxs_A KDPG aldolase; 2-keto-3 99.3 9.1E-11 3.1E-15 103.6 17.0 156 46-258 42-200 (225)
75 1p0k_A Isopentenyl-diphosphate 99.3 1.7E-11 5.9E-16 115.0 11.5 79 209-289 238-323 (349)
76 1w0m_A TIM, triosephosphate is 99.3 6.2E-11 2.1E-15 104.5 14.0 165 81-274 45-224 (226)
77 3lab_A Putative KDPG (2-keto-3 99.3 1.4E-10 4.8E-15 101.2 16.0 156 46-257 29-192 (217)
78 1hg3_A Triosephosphate isomera 99.2 7E-11 2.4E-15 104.1 13.2 162 81-271 48-224 (225)
79 2e6f_A Dihydroorotate dehydrog 99.2 8.5E-12 2.9E-16 115.3 7.0 78 210-291 232-310 (314)
80 1tqx_A D-ribulose-5-phosphate 99.2 1E-10 3.5E-15 103.3 13.4 185 46-275 22-224 (227)
81 3zwt_A Dihydroorotate dehydrog 99.2 1.1E-10 3.6E-15 110.4 14.2 78 210-291 285-364 (367)
82 3oix_A Putative dihydroorotate 99.2 2.5E-11 8.6E-16 113.7 9.8 77 210-291 262-341 (345)
83 4ef8_A Dihydroorotate dehydrog 99.2 1.8E-11 6.1E-16 115.0 8.4 78 210-291 265-343 (354)
84 3b0p_A TRNA-dihydrouridine syn 99.2 6.4E-11 2.2E-15 111.3 12.2 152 46-262 74-233 (350)
85 3cu2_A Ribulose-5-phosphate 3- 99.2 3.2E-11 1.1E-15 107.3 9.5 181 46-272 30-236 (237)
86 1ep3_A Dihydroorotate dehydrog 99.2 1.9E-11 6.5E-16 112.5 8.0 79 210-293 230-308 (311)
87 3jr2_A Hexulose-6-phosphate sy 99.2 1.8E-11 6.3E-16 107.5 6.9 159 81-274 47-215 (218)
88 2p10_A MLL9387 protein; putati 99.2 1.4E-09 4.7E-14 97.8 19.1 208 44-275 37-281 (286)
89 2f6u_A GGGPS, (S)-3-O-geranylg 99.2 7.1E-11 2.4E-15 104.7 9.9 170 37-263 15-227 (234)
90 1eep_A Inosine 5'-monophosphat 99.2 8.2E-10 2.8E-14 105.6 18.1 129 104-259 155-292 (404)
91 1vhn_A Putative flavin oxidore 99.2 7.7E-11 2.6E-15 109.3 10.6 140 46-263 75-222 (318)
92 1gox_A (S)-2-hydroxy-acid oxid 99.2 2.4E-10 8.1E-15 108.2 12.9 163 46-257 140-314 (370)
93 3i65_A Dihydroorotate dehydrog 99.1 9.9E-11 3.4E-15 111.7 9.9 78 210-291 332-411 (415)
94 2c6q_A GMP reductase 2; TIM ba 99.1 8.9E-10 3.1E-14 103.5 16.4 233 23-301 53-335 (351)
95 4af0_A Inosine-5'-monophosphat 99.1 1.9E-09 6.4E-14 104.9 17.7 129 104-259 283-420 (556)
96 1vcf_A Isopentenyl-diphosphate 99.1 3.5E-10 1.2E-14 105.5 11.4 48 208-257 242-290 (332)
97 1kbi_A Cytochrome B2, L-LCR; f 99.1 2.9E-10 9.8E-15 111.8 11.0 87 139-257 343-437 (511)
98 2qr6_A IMP dehydrogenase/GMP r 99.1 4.1E-09 1.4E-13 100.4 18.0 204 19-259 59-313 (393)
99 4avf_A Inosine-5'-monophosphat 99.1 2.4E-09 8.4E-14 104.8 16.5 129 104-259 231-368 (490)
100 2nli_A Lactate oxidase; flavoe 99.1 6.8E-10 2.3E-14 104.9 11.9 95 130-257 221-318 (368)
101 3sgz_A Hydroxyacid oxidase 2; 99.1 1.2E-09 4.2E-14 102.2 13.3 95 130-257 209-306 (352)
102 2nzl_A Hydroxyacid oxidase 1; 99.1 6.4E-10 2.2E-14 105.9 11.5 95 130-257 244-341 (392)
103 1gte_A Dihydropyrimidine dehyd 99.1 7.7E-10 2.6E-14 117.3 13.2 190 46-289 652-851 (1025)
104 2uva_G Fatty acid synthase bet 99.1 1.3E-09 4.5E-14 121.3 15.3 207 23-274 579-816 (2060)
105 1tv5_A Dhodehase, dihydroorota 99.0 8.4E-10 2.9E-14 106.4 10.4 78 210-291 360-439 (443)
106 4fxs_A Inosine-5'-monophosphat 99.0 4.9E-09 1.7E-13 102.8 15.5 129 104-259 233-370 (496)
107 3zen_D Fatty acid synthase; tr 99.0 6.8E-10 2.3E-14 127.0 10.1 192 22-259 423-653 (3089)
108 3usb_A Inosine-5'-monophosphat 99.0 1.2E-08 4E-13 100.4 17.5 181 46-259 197-395 (511)
109 3gr7_A NADPH dehydrogenase; fl 99.0 6.9E-09 2.4E-13 97.0 14.1 150 46-262 148-315 (340)
110 1jcn_A Inosine monophosphate d 98.9 1.1E-08 3.8E-13 100.6 14.6 133 104-259 257-394 (514)
111 1z41_A YQJM, probable NADH-dep 98.9 2.8E-08 9.4E-13 92.8 15.9 150 46-262 148-315 (338)
112 1w8s_A FBP aldolase, fructose- 98.9 2.7E-08 9.2E-13 89.7 15.0 66 212-279 186-258 (263)
113 3vzx_A Heptaprenylglyceryl pho 98.9 8.3E-09 2.8E-13 90.9 11.3 60 209-274 167-227 (228)
114 1p4c_A L(+)-mandelate dehydrog 98.9 4.2E-09 1.4E-13 100.0 9.0 87 139-257 225-312 (380)
115 1f76_A Dihydroorotate dehydrog 98.9 5.6E-09 1.9E-13 97.3 9.4 51 210-263 276-328 (336)
116 2uv8_G Fatty acid synthase sub 98.9 2.2E-08 7.6E-13 111.1 15.0 210 18-274 580-823 (2051)
117 3glc_A Aldolase LSRF; TIM barr 98.8 3.6E-08 1.2E-12 90.1 13.7 150 91-283 104-288 (295)
118 3exr_A RMPD (hexulose-6-phosph 98.8 2E-08 6.7E-13 88.4 11.5 191 40-274 12-218 (221)
119 3hgj_A Chromate reductase; TIM 98.8 4.6E-08 1.6E-12 91.7 13.8 152 46-262 156-326 (349)
120 3w01_A Heptaprenylglyceryl pho 98.8 4E-08 1.4E-12 86.7 12.5 50 208-262 172-222 (235)
121 1vrd_A Inosine-5'-monophosphat 98.8 5.7E-08 2E-12 95.1 14.3 128 104-257 239-374 (494)
122 2gou_A Oxidoreductase, FMN-bin 98.7 1.1E-07 3.7E-12 89.7 14.0 147 46-262 165-330 (365)
123 1q6o_A Humps, 3-keto-L-gulonat 98.7 5.2E-08 1.8E-12 85.1 10.3 158 81-274 44-213 (216)
124 1to3_A Putative aldolase YIHT; 98.7 8.6E-08 2.9E-12 88.2 12.0 137 105-279 112-293 (304)
125 1vyr_A Pentaerythritol tetrani 98.7 1.4E-07 4.8E-12 88.9 13.2 148 46-262 165-331 (364)
126 1zfj_A Inosine monophosphate d 98.7 1.2E-06 4.1E-11 85.5 19.4 181 46-258 174-371 (491)
127 2czd_A Orotidine 5'-phosphate 98.7 1.8E-07 6.1E-12 81.3 12.0 179 41-273 7-206 (208)
128 3l5l_A Xenobiotic reductase A; 98.7 3.4E-07 1.2E-11 86.2 14.8 153 46-262 162-333 (363)
129 2r14_A Morphinone reductase; H 98.6 1.6E-07 5.4E-12 88.9 11.7 148 46-262 170-336 (377)
130 3kru_A NADH:flavin oxidoreduct 98.6 1.4E-07 4.9E-12 88.1 11.2 149 46-262 147-315 (343)
131 3l5a_A NADH/flavin oxidoreduct 98.6 7.6E-08 2.6E-12 92.3 9.2 155 46-262 174-354 (419)
132 2hsa_B 12-oxophytodienoate red 98.5 5.4E-07 1.8E-11 86.0 12.1 156 46-262 175-356 (402)
133 3iwp_A Copper homeostasis prot 98.5 5.5E-06 1.9E-10 74.8 18.0 165 43-252 47-238 (287)
134 1ps9_A 2,4-dienoyl-COA reducta 98.5 5.9E-07 2E-11 90.9 13.0 154 46-260 145-318 (671)
135 1me8_A Inosine-5'-monophosphat 98.5 6E-07 2.1E-11 88.1 11.9 128 104-258 244-387 (503)
136 1mzh_A Deoxyribose-phosphate a 98.5 9.1E-07 3.1E-11 77.8 11.6 43 209-253 161-205 (225)
137 1icp_A OPR1, 12-oxophytodienoa 98.5 4.4E-07 1.5E-11 85.9 9.3 149 46-262 171-338 (376)
138 3cwo_X Beta/alpha-barrel prote 98.5 4E-06 1.4E-10 72.4 14.8 49 209-259 162-210 (237)
139 4ab4_A Xenobiotic reductase B; 98.4 2E-06 7E-11 80.8 13.4 141 46-262 157-316 (362)
140 3gka_A N-ethylmaleimide reduct 98.4 1.1E-06 3.6E-11 82.7 10.9 142 46-262 165-324 (361)
141 3aty_A Tcoye, prostaglandin F2 98.4 2E-06 6.9E-11 81.4 11.5 46 211-262 298-344 (379)
142 1twd_A Copper homeostasis prot 98.4 5.1E-05 1.7E-09 67.4 19.2 167 42-253 8-199 (256)
143 3k30_A Histamine dehydrogenase 98.3 1.2E-06 4.2E-11 88.9 10.1 50 209-262 282-332 (690)
144 2bdq_A Copper homeostasis prot 98.3 1.4E-05 4.6E-10 69.8 13.5 176 44-262 10-217 (224)
145 1o94_A Tmadh, trimethylamine d 98.3 5.3E-06 1.8E-10 84.9 12.5 50 209-262 279-329 (729)
146 1v5x_A PRA isomerase, phosphor 98.2 4.8E-05 1.6E-09 65.7 16.3 185 42-276 8-200 (203)
147 3tdn_A FLR symmetric alpha-bet 98.2 5.3E-06 1.8E-10 73.6 9.2 52 207-262 65-116 (247)
148 3m47_A Orotidine 5'-phosphate 98.2 3.2E-05 1.1E-09 68.1 14.0 181 40-276 19-226 (228)
149 1nsj_A PRAI, phosphoribosyl an 98.2 0.00011 3.9E-09 63.5 16.9 183 42-273 9-203 (205)
150 3tjx_A Dihydroorotate dehydrog 98.1 1E-06 3.5E-11 82.6 2.7 77 211-291 266-343 (354)
151 1x1o_A Nicotinate-nucleotide p 98.0 1.9E-05 6.4E-10 71.8 10.0 91 128-259 184-275 (286)
152 2cu0_A Inosine-5'-monophosphat 98.0 2E-05 6.9E-10 76.9 10.9 128 105-258 231-363 (486)
153 3ru6_A Orotidine 5'-phosphate 98.0 0.00011 3.8E-09 67.1 14.7 38 237-274 215-252 (303)
154 1ofd_A Ferredoxin-dependent gl 98.0 1.3E-05 4.6E-10 86.3 9.8 119 113-258 996-1134(1520)
155 4aaj_A N-(5'-phosphoribosyl)an 98.0 0.00099 3.4E-08 58.5 19.8 185 42-274 28-225 (228)
156 1ea0_A Glutamate synthase [NAD 98.0 8.5E-06 2.9E-10 87.6 7.6 119 113-257 961-1098(1479)
157 3vk5_A MOEO5; TIM barrel, tran 98.0 2.9E-05 1E-09 69.9 9.9 48 208-257 212-261 (286)
158 4dbe_A Orotidine 5'-phosphate 98.0 0.00018 6.2E-09 62.9 14.5 151 81-275 41-210 (222)
159 3kts_A Glycerol uptake operon 97.9 0.00018 6.1E-09 61.4 13.6 165 36-256 10-183 (192)
160 3ve9_A Orotidine-5'-phosphate 97.9 6.7E-05 2.3E-09 65.4 11.2 60 213-276 142-204 (215)
161 3tfx_A Orotidine 5'-phosphate 97.9 0.0001 3.5E-09 66.0 11.4 40 238-277 202-241 (259)
162 3oa3_A Aldolase; structural ge 97.8 7.4E-05 2.5E-09 67.6 9.9 40 211-252 222-263 (288)
163 2b7n_A Probable nicotinate-nuc 97.8 3.1E-05 1E-09 70.0 7.4 94 127-259 169-264 (273)
164 1o4u_A Type II quinolic acid p 97.8 2.3E-05 7.7E-10 71.2 6.2 94 127-259 180-275 (285)
165 3r12_A Deoxyribose-phosphate a 97.8 4.4E-05 1.5E-09 68.1 8.0 29 220-250 215-243 (260)
166 1ub3_A Aldolase protein; schif 97.8 7.8E-05 2.7E-09 65.2 8.6 36 220-257 175-212 (220)
167 1eix_A Orotidine 5'-monophosph 97.8 4E-05 1.4E-09 68.1 6.7 60 210-273 171-242 (245)
168 1qap_A Quinolinic acid phospho 97.7 0.00015 5.2E-09 66.1 10.5 89 127-258 196-286 (296)
169 1thf_D HISF protein; thermophI 97.7 8.2E-05 2.8E-09 65.8 8.4 59 209-272 62-120 (253)
170 1pii_A N-(5'phosphoribosyl)ant 97.7 0.002 6.9E-08 62.0 18.6 232 28-275 150-452 (452)
171 4a3u_A NCR, NADH\:flavin oxido 97.7 0.00023 7.8E-09 66.7 11.8 46 212-262 277-323 (358)
172 1vqt_A Orotidine 5'-phosphate 97.7 0.00014 5E-09 63.2 9.5 55 213-272 148-212 (213)
173 1ka9_F Imidazole glycerol phos 97.7 8.7E-05 3E-09 65.6 8.2 49 210-262 64-112 (252)
174 3ngj_A Deoxyribose-phosphate a 97.7 0.00012 4.2E-09 64.5 8.8 32 220-253 199-230 (239)
175 2w6r_A Imidazole glycerol phos 97.7 0.00015 5.1E-09 64.6 9.5 54 207-262 60-114 (266)
176 3ndo_A Deoxyribose-phosphate a 97.7 5.9E-05 2E-09 66.3 6.2 29 220-250 189-217 (231)
177 3ih1_A Methylisocitrate lyase; 97.7 0.0011 3.8E-08 60.6 15.0 179 39-257 33-248 (305)
178 2jbm_A Nicotinate-nucleotide p 97.6 6.2E-05 2.1E-09 68.9 6.4 92 129-259 186-279 (299)
179 2yyu_A Orotidine 5'-phosphate 97.6 0.00011 3.8E-09 65.2 7.6 63 210-276 165-239 (246)
180 1qpo_A Quinolinate acid phosph 97.6 0.00016 5.5E-09 65.5 8.5 94 127-259 182-276 (284)
181 1xg4_A Probable methylisocitra 97.6 0.00067 2.3E-08 61.8 12.5 179 39-257 21-240 (295)
182 3tqv_A Nicotinate-nucleotide p 97.6 0.00018 6.1E-09 65.1 8.1 92 126-258 185-276 (287)
183 1dbt_A Orotidine 5'-phosphate 97.5 0.00012 4E-09 64.7 6.4 60 211-273 164-235 (239)
184 3c2e_A Nicotinate-nucleotide p 97.5 8.7E-05 3E-09 67.7 5.6 92 129-259 188-284 (294)
185 3tjl_A NADPH dehydrogenase; OL 97.5 0.00018 6E-09 68.5 7.9 46 213-262 305-354 (407)
186 1n7k_A Deoxyribose-phosphate a 97.5 0.00032 1.1E-08 61.8 8.9 33 222-256 193-227 (234)
187 1qo2_A Molecule: N-((5-phospho 97.5 6.2E-05 2.1E-09 66.3 4.0 51 207-262 60-110 (241)
188 1zfj_A Inosine monophosphate d 97.5 0.0033 1.1E-07 61.1 16.2 112 105-253 174-303 (491)
189 4e38_A Keto-hydroxyglutarate-a 97.4 0.0032 1.1E-07 55.3 14.1 124 83-251 27-153 (232)
190 3gnn_A Nicotinate-nucleotide p 97.4 0.00063 2.2E-08 61.9 9.3 92 126-258 196-287 (298)
191 1h5y_A HISF; histidine biosynt 97.4 0.00036 1.2E-08 61.0 7.6 51 210-264 66-116 (253)
192 3paj_A Nicotinate-nucleotide p 97.4 0.00054 1.8E-08 62.9 8.9 90 127-257 219-308 (320)
193 3eoo_A Methylisocitrate lyase; 97.4 0.0054 1.9E-07 55.8 15.2 179 39-257 26-244 (298)
194 3l0g_A Nicotinate-nucleotide p 97.3 0.00064 2.2E-08 61.7 8.9 92 126-258 194-285 (300)
195 2y88_A Phosphoribosyl isomeras 97.3 0.00033 1.1E-08 61.5 6.8 56 211-271 64-119 (244)
196 1vzw_A Phosphoribosyl isomeras 97.3 0.00031 1E-08 61.8 6.4 52 211-266 65-116 (244)
197 1vhc_A Putative KHG/KDPG aldol 97.3 0.0069 2.4E-07 52.9 15.0 126 81-251 8-136 (224)
198 3iv3_A Tagatose 1,6-diphosphat 97.3 0.0036 1.2E-07 57.8 13.5 73 213-288 237-318 (332)
199 2ze3_A DFA0005; organic waste 97.3 0.011 3.6E-07 53.3 16.0 175 40-257 21-237 (275)
200 3lab_A Putative KDPG (2-keto-3 97.3 0.0024 8E-08 55.5 11.2 113 93-250 16-137 (217)
201 3ldv_A Orotidine 5'-phosphate 97.2 0.003 1E-07 56.3 11.1 35 238-272 220-254 (255)
202 1zlp_A PSR132, petal death pro 97.2 0.0046 1.6E-07 56.8 12.5 179 39-257 43-262 (318)
203 1vkf_A Glycerol uptake operon 97.2 0.009 3.1E-07 50.6 13.3 37 211-253 142-178 (188)
204 3tr2_A Orotidine 5'-phosphate 97.1 0.002 6.8E-08 56.9 8.9 117 153-273 80-237 (239)
205 3b8i_A PA4872 oxaloacetate dec 97.1 0.0043 1.5E-07 56.2 11.2 179 39-258 25-240 (287)
206 3r2g_A Inosine 5'-monophosphat 97.0 0.0018 6.1E-08 60.6 8.7 125 90-252 40-169 (361)
207 1wa3_A 2-keto-3-deoxy-6-phosph 97.0 0.0066 2.3E-07 51.7 11.7 102 105-251 26-130 (205)
208 4fxs_A Inosine-5'-monophosphat 97.0 0.0082 2.8E-07 58.5 13.4 115 43-167 231-364 (496)
209 3usb_A Inosine-5'-monophosphat 96.9 0.021 7.3E-07 55.8 15.6 40 210-252 285-325 (511)
210 1vcv_A Probable deoxyribose-ph 96.9 0.0051 1.7E-07 53.8 9.9 31 221-253 184-221 (226)
211 1p1x_A Deoxyribose-phosphate a 96.9 0.0025 8.4E-08 57.0 8.0 26 220-247 197-222 (260)
212 3qw3_A Orotidine-5-phosphate d 96.9 0.013 4.4E-07 52.2 12.6 60 213-275 184-251 (255)
213 4avf_A Inosine-5'-monophosphat 96.9 0.014 4.9E-07 56.7 14.0 114 45-168 231-363 (490)
214 1ypf_A GMP reductase; GUAC, pu 96.8 0.015 5.2E-07 53.7 12.7 111 46-166 109-239 (336)
215 4gj1_A 1-(5-phosphoribosyl)-5- 96.8 0.0027 9.1E-08 56.2 7.2 53 208-264 62-114 (243)
216 3ffs_A Inosine-5-monophosphate 96.8 0.014 4.8E-07 55.3 12.6 114 44-167 145-276 (400)
217 1wbh_A KHG/KDPG aldolase; lyas 96.8 0.032 1.1E-06 48.2 13.8 124 83-251 9-135 (214)
218 2a4a_A Deoxyribose-phosphate a 96.7 0.0052 1.8E-07 55.4 8.5 26 220-247 224-249 (281)
219 1mxs_A KDPG aldolase; 2-keto-3 96.7 0.032 1.1E-06 48.6 13.4 124 83-251 19-145 (225)
220 1s2w_A Phosphoenolpyruvate pho 96.6 0.014 4.6E-07 53.1 11.1 177 39-257 23-243 (295)
221 1wv2_A Thiazole moeity, thiazo 96.6 0.014 4.9E-07 51.7 10.4 71 42-119 143-214 (265)
222 1jcn_A Inosine monophosphate d 96.6 0.027 9.1E-07 55.0 13.4 113 45-167 257-388 (514)
223 2vws_A YFAU, 2-keto-3-deoxy su 96.5 0.35 1.2E-05 43.0 19.6 177 37-255 21-240 (267)
224 3qw4_B UMP synthase; N-termina 96.5 0.032 1.1E-06 53.7 13.4 40 237-276 208-253 (453)
225 1eep_A Inosine 5'-monophosphat 96.5 0.031 1.1E-06 52.9 13.2 112 45-166 155-285 (404)
226 3khj_A Inosine-5-monophosphate 96.5 0.037 1.3E-06 51.7 13.4 124 91-252 44-173 (361)
227 4fo4_A Inosine 5'-monophosphat 96.5 0.037 1.3E-06 51.8 13.2 124 91-252 45-177 (366)
228 1dxe_A 2-dehydro-3-deoxy-galac 96.5 0.4 1.4E-05 42.2 20.2 179 37-254 22-239 (256)
229 3sgz_A Hydroxyacid oxidase 2; 96.5 0.022 7.4E-07 53.0 11.5 86 80-166 205-301 (352)
230 2v5j_A 2,4-dihydroxyhept-2-ENE 96.5 0.46 1.6E-05 42.8 21.4 177 37-255 42-261 (287)
231 1vrd_A Inosine-5'-monophosphat 96.4 0.045 1.5E-06 53.1 14.0 112 45-166 239-369 (494)
232 2qr6_A IMP dehydrogenase/GMP r 96.4 0.026 9E-07 53.1 11.9 116 45-166 168-306 (393)
233 3fok_A Uncharacterized protein 96.4 0.0073 2.5E-07 54.9 7.5 59 214-273 230-296 (307)
234 3tsm_A IGPS, indole-3-glycerol 96.4 0.033 1.1E-06 49.9 11.7 85 209-300 108-200 (272)
235 2c6q_A GMP reductase 2; TIM ba 96.3 0.052 1.8E-06 50.4 12.8 111 46-167 121-253 (351)
236 2qiw_A PEP phosphonomutase; st 96.2 0.19 6.4E-06 44.6 15.8 176 39-254 24-238 (255)
237 1vc4_A Indole-3-glycerol phosp 96.2 0.025 8.7E-07 50.2 10.0 84 209-300 94-185 (254)
238 2yw3_A 4-hydroxy-2-oxoglutarat 96.1 0.076 2.6E-06 45.5 12.1 120 85-251 8-130 (207)
239 3vk5_A MOEO5; TIM barrel, tran 96.0 0.0078 2.7E-07 54.1 5.7 83 40-132 178-270 (286)
240 4eiv_A Deoxyribose-phosphate a 95.9 0.054 1.8E-06 48.9 10.4 21 221-243 231-252 (297)
241 2ffc_A Orotidine 5-monophospha 95.7 0.087 3E-06 48.9 11.6 59 213-274 280-346 (353)
242 3eww_A Ompdecase, orotidine-5' 95.7 0.034 1.2E-06 49.6 8.5 34 238-271 215-249 (260)
243 2hjp_A Phosphonopyruvate hydro 95.7 0.14 4.9E-06 46.2 12.7 177 39-257 19-240 (290)
244 3fa4_A 2,3-dimethylmalate lyas 95.6 0.78 2.7E-05 41.6 17.3 178 40-257 23-244 (302)
245 3q94_A Fructose-bisphosphate a 95.6 0.74 2.5E-05 41.5 17.0 193 40-273 26-252 (288)
246 2agk_A 1-(5-phosphoribosyl)-5- 95.5 0.013 4.6E-07 52.2 5.1 57 210-273 65-126 (260)
247 2i9e_A Triosephosphate isomera 95.5 0.036 1.2E-06 49.3 7.6 38 221-261 202-240 (259)
248 2htm_A Thiazole biosynthesis p 95.4 0.074 2.5E-06 47.3 9.5 70 43-119 133-205 (268)
249 3bo9_A Putative nitroalkan dio 95.4 0.3 1E-05 44.7 14.0 117 91-251 25-150 (326)
250 3iwp_A Copper homeostasis prot 95.4 0.098 3.3E-06 47.1 10.3 81 140-252 40-131 (287)
251 1aj0_A DHPS, dihydropteroate s 95.3 0.067 2.3E-06 48.2 9.0 87 46-140 42-136 (282)
252 3lye_A Oxaloacetate acetyl hyd 95.2 0.89 3.1E-05 41.3 16.1 179 39-257 29-252 (307)
253 1yya_A Triosephosphate isomera 95.2 0.13 4.4E-06 45.5 10.2 37 221-260 204-241 (250)
254 3vav_A 3-methyl-2-oxobutanoate 95.1 1.1 3.8E-05 40.0 16.2 95 39-135 33-140 (275)
255 1yxy_A Putative N-acetylmannos 95.1 0.58 2E-05 40.2 14.2 113 44-166 90-215 (234)
256 3igs_A N-acetylmannosamine-6-p 95.1 0.063 2.2E-06 46.9 8.0 85 38-129 132-219 (232)
257 3q58_A N-acetylmannosamine-6-p 95.0 0.066 2.3E-06 46.7 7.9 85 38-129 132-219 (229)
258 1vs1_A 3-deoxy-7-phosphoheptul 94.9 1 3.4E-05 40.3 15.6 174 46-256 56-246 (276)
259 1nvm_A HOA, 4-hydroxy-2-oxoval 94.9 0.42 1.4E-05 44.0 13.5 208 46-291 34-270 (345)
260 4hb7_A Dihydropteroate synthas 94.8 0.15 5E-06 45.6 9.6 84 46-136 34-124 (270)
261 3sr7_A Isopentenyl-diphosphate 94.8 0.086 2.9E-06 49.3 8.4 137 90-253 84-238 (365)
262 1aw2_A Triosephosphate isomera 94.7 0.14 4.9E-06 45.4 9.2 38 221-261 206-244 (256)
263 2vp8_A Dihydropteroate synthas 94.6 0.16 5.6E-06 46.4 9.5 86 46-140 69-163 (318)
264 1viz_A PCRB protein homolog; s 94.6 0.057 2E-06 47.5 6.2 80 33-125 131-215 (240)
265 3qz6_A HPCH/HPAI aldolase; str 94.6 0.53 1.8E-05 41.7 12.7 179 37-254 18-238 (261)
266 1jvn_A Glutamine, bifunctional 94.6 0.27 9.3E-06 48.4 11.8 87 44-136 454-546 (555)
267 1zco_A 2-dehydro-3-deoxyphosph 94.5 1.4 4.9E-05 38.9 15.4 182 40-256 31-231 (262)
268 3tr9_A Dihydropteroate synthas 94.5 0.59 2E-05 42.6 13.0 94 46-142 53-153 (314)
269 1twd_A Copper homeostasis prot 94.5 0.17 5.7E-06 44.8 9.0 77 144-252 6-93 (256)
270 2dqw_A Dihydropteroate synthas 94.5 0.25 8.6E-06 44.7 10.4 84 46-138 56-147 (294)
271 1izc_A Macrophomate synthase i 94.4 1.3 4.5E-05 40.7 15.5 88 37-133 45-136 (339)
272 1gvf_A Tagatose-bisphosphate a 94.4 2.7 9.2E-05 37.7 18.5 194 41-274 24-249 (286)
273 3s1x_A Probable transaldolase; 94.3 1.2 4E-05 38.6 13.9 176 39-257 4-193 (223)
274 3qja_A IGPS, indole-3-glycerol 94.3 0.16 5.6E-06 45.4 8.8 83 210-299 102-192 (272)
275 1tre_A Triosephosphate isomera 94.3 0.25 8.6E-06 43.7 9.7 38 221-261 204-242 (255)
276 1tx2_A DHPS, dihydropteroate s 94.3 0.12 4.1E-06 46.9 7.9 87 46-139 67-161 (297)
277 2jgq_A Triosephosphate isomera 94.3 0.19 6.5E-06 43.9 8.8 37 221-260 188-225 (233)
278 3r8r_A Transaldolase; pentose 94.2 1.4 4.8E-05 37.8 14.0 175 39-257 4-191 (212)
279 1mo0_A TIM, triosephosphate is 94.1 0.19 6.6E-06 44.9 8.7 38 221-261 222-260 (275)
280 1r2r_A TIM, triosephosphate is 94.0 0.26 9E-06 43.4 9.2 37 221-260 203-240 (248)
281 1y0e_A Putative N-acetylmannos 93.9 0.12 4.2E-06 44.2 6.9 79 39-119 123-202 (223)
282 2v82_A 2-dehydro-3-deoxy-6-pho 93.8 2 6.9E-05 36.1 14.5 103 104-251 22-127 (212)
283 1o5x_A TIM, triosephosphate is 93.7 0.51 1.8E-05 41.6 10.6 41 221-265 203-244 (248)
284 1m3u_A 3-methyl-2-oxobutanoate 93.7 3.5 0.00012 36.5 17.1 94 39-134 21-127 (264)
285 1oy0_A Ketopantoate hydroxymet 93.7 2.5 8.5E-05 37.8 15.2 96 39-134 38-146 (281)
286 3ih1_A Methylisocitrate lyase; 93.7 0.33 1.1E-05 44.1 9.6 119 46-167 108-244 (305)
287 2btm_A TIM, protein (triosepho 93.6 0.22 7.6E-06 44.0 8.1 36 221-259 204-240 (252)
288 2gjl_A Hypothetical protein PA 93.6 0.54 1.9E-05 42.8 11.1 117 91-251 14-144 (328)
289 1o66_A 3-methyl-2-oxobutanoate 93.6 2.9 0.0001 37.2 15.5 95 39-134 21-128 (275)
290 2ftp_A Hydroxymethylglutaryl-C 93.5 1.7 5.8E-05 39.1 14.2 208 46-298 34-291 (302)
291 1xky_A Dihydrodipicolinate syn 93.5 4.1 0.00014 36.6 20.3 83 46-135 37-132 (301)
292 1vr6_A Phospho-2-dehydro-3-deo 93.4 1.8 6.2E-05 40.0 14.3 174 46-256 124-314 (350)
293 1vli_A Spore coat polysacchari 93.4 2.3 8E-05 39.7 15.1 133 81-249 103-245 (385)
294 1eye_A DHPS 1, dihydropteroate 93.4 0.63 2.2E-05 41.7 10.9 86 46-139 33-126 (280)
295 2r8w_A AGR_C_1641P; APC7498, d 93.4 4.6 0.00016 36.9 21.0 82 46-134 59-153 (332)
296 2wqp_A Polysialic acid capsule 93.4 3.7 0.00013 37.8 16.3 132 82-249 94-233 (349)
297 2j27_A Triosephosphate isomera 93.4 0.51 1.7E-05 41.6 10.0 40 221-264 205-245 (250)
298 1m6j_A TIM, TPI, triosephospha 93.3 0.26 9E-06 43.8 8.2 37 221-260 212-249 (261)
299 3si9_A DHDPS, dihydrodipicolin 93.3 4.6 0.00016 36.6 19.5 82 46-134 47-141 (315)
300 1xg4_A Probable methylisocitra 93.3 0.52 1.8E-05 42.6 10.2 118 46-166 98-235 (295)
301 2f6u_A GGGPS, (S)-3-O-geranylg 93.3 0.21 7.1E-06 43.7 7.3 74 33-119 138-216 (234)
302 3nvt_A 3-deoxy-D-arabino-heptu 93.2 0.86 2.9E-05 42.7 12.0 173 46-253 160-347 (385)
303 2z6i_A Trans-2-enoyl-ACP reduc 93.2 1 3.5E-05 41.1 12.3 117 91-251 11-136 (332)
304 2pgw_A Muconate cycloisomerase 93.0 2 6.7E-05 39.9 14.2 46 209-256 229-275 (384)
305 3gdm_A Orotidine 5'-phosphate 93.0 0.11 3.6E-06 46.5 5.1 35 238-272 220-255 (267)
306 3g3d_A UMP synthase, uridine 5 93.0 0.057 2E-06 49.3 3.3 35 238-272 267-302 (312)
307 2vc6_A MOSA, dihydrodipicolina 92.9 5 0.00017 35.8 20.1 82 46-134 25-119 (292)
308 4af0_A Inosine-5'-monophosphat 92.9 0.2 6.8E-06 48.9 7.1 81 39-119 327-411 (556)
309 3eoo_A Methylisocitrate lyase; 92.8 0.63 2.2E-05 42.1 10.0 119 46-167 102-240 (298)
310 2fds_A Orotidine-monophosphate 92.8 2.2 7.6E-05 39.4 13.9 33 243-275 305-337 (352)
311 3l21_A DHDPS, dihydrodipicolin 92.8 5.3 0.00018 35.9 18.8 92 46-144 40-146 (304)
312 3flu_A DHDPS, dihydrodipicolin 92.7 5.3 0.00018 35.8 20.0 82 46-134 32-126 (297)
313 3luf_A Two-component system re 92.7 4.5 0.00015 35.0 16.9 171 81-275 64-246 (259)
314 1me8_A Inosine-5'-monophosphat 92.6 0.74 2.5E-05 44.6 11.0 112 45-167 244-382 (503)
315 3daq_A DHDPS, dihydrodipicolin 92.6 5.5 0.00019 35.6 20.6 82 46-134 27-121 (292)
316 3m5v_A DHDPS, dihydrodipicolin 92.5 5.7 0.0002 35.6 19.9 83 46-135 32-128 (301)
317 4a29_A Engineered retro-aldol 92.5 2.7 9.3E-05 37.1 13.3 87 208-301 91-185 (258)
318 3fa4_A 2,3-dimethylmalate lyas 92.3 0.74 2.5E-05 41.7 9.8 120 46-167 99-240 (302)
319 2yc6_A Triosephosphate isomera 92.0 3 0.0001 36.8 13.1 34 221-257 208-242 (257)
320 3lye_A Oxaloacetate acetyl hyd 92.0 0.73 2.5E-05 41.9 9.4 119 46-166 107-247 (307)
321 3eb2_A Putative dihydrodipicol 92.0 6.3 0.00022 35.3 15.7 82 46-134 29-123 (300)
322 3pm6_A Putative fructose-bisph 92.0 6.8 0.00023 35.4 17.6 182 40-256 32-255 (306)
323 2vxn_A Triosephosphate isomera 92.0 1.2 4.2E-05 39.2 10.5 40 221-264 206-246 (251)
324 4djd_D C/Fe-SP, corrinoid/iron 91.9 0.56 1.9E-05 43.0 8.5 118 46-166 84-214 (323)
325 1m5w_A Pyridoxal phosphate bio 91.9 3.6 0.00012 35.8 13.1 175 44-257 26-220 (243)
326 1xky_A Dihydrodipicolinate syn 91.8 2.1 7.3E-05 38.5 12.3 89 152-270 39-132 (301)
327 3m9y_A Triosephosphate isomera 91.8 2 6.9E-05 37.8 11.8 34 221-257 208-242 (254)
328 2ojp_A DHDPS, dihydrodipicolin 91.7 7 0.00024 34.8 18.6 83 46-135 26-121 (292)
329 2wqp_A Polysialic acid capsule 91.6 1.6 5.5E-05 40.3 11.4 75 137-251 102-180 (349)
330 1ney_A TIM, triosephosphate is 91.6 0.53 1.8E-05 41.4 7.8 38 221-262 202-240 (247)
331 3qze_A DHDPS, dihydrodipicolin 91.6 7.5 0.00026 35.1 20.2 82 46-134 48-142 (314)
332 3n9r_A Fructose-bisphosphate a 91.6 7.7 0.00026 35.1 16.4 184 40-256 22-259 (307)
333 2i1o_A Nicotinate phosphoribos 91.5 1.1 3.7E-05 42.3 10.3 35 221-258 270-304 (398)
334 3g8r_A Probable spore coat pol 91.5 3.6 0.00012 38.0 13.6 93 74-167 118-226 (350)
335 3na8_A Putative dihydrodipicol 91.4 7.9 0.00027 35.0 19.7 82 46-134 49-143 (315)
336 1vli_A Spore coat polysacchari 91.4 3.2 0.00011 38.8 13.2 93 74-167 141-249 (385)
337 1xm3_A Thiazole biosynthesis p 91.3 0.78 2.7E-05 40.6 8.7 71 42-119 134-205 (264)
338 4adt_A Pyridoxine biosynthetic 91.2 0.8 2.7E-05 41.4 8.8 81 142-249 24-104 (297)
339 2rfg_A Dihydrodipicolinate syn 91.2 7.9 0.00027 34.6 19.2 82 46-134 25-119 (297)
340 3a5f_A Dihydrodipicolinate syn 91.2 7.8 0.00027 34.5 18.3 83 46-135 26-121 (291)
341 3gk0_A PNP synthase, pyridoxin 91.1 4.2 0.00014 36.0 12.9 203 16-257 26-248 (278)
342 2rdx_A Mandelate racemase/muco 91.1 2.6 9E-05 39.0 12.6 46 209-256 225-271 (379)
343 1mdl_A Mandelate racemase; iso 91.1 1.7 5.7E-05 39.9 11.1 46 209-256 228-274 (359)
344 2yxg_A DHDPS, dihydrodipicolin 91.0 2.3 8E-05 38.0 11.7 89 152-270 27-120 (289)
345 2ehh_A DHDPS, dihydrodipicolin 91.0 8.1 0.00028 34.4 19.5 82 46-134 25-119 (294)
346 2yxg_A DHDPS, dihydrodipicolin 91.0 8.1 0.00028 34.4 20.2 82 46-134 25-119 (289)
347 3cpr_A Dihydrodipicolinate syn 91.0 8.4 0.00029 34.6 19.8 82 46-134 41-135 (304)
348 3cpr_A Dihydrodipicolinate syn 90.9 2.4 8.3E-05 38.2 11.8 88 152-269 43-135 (304)
349 3kts_A Glycerol uptake operon 90.9 0.22 7.4E-06 42.2 4.4 42 81-122 139-180 (192)
350 2wkj_A N-acetylneuraminate lya 90.9 2.3 7.8E-05 38.3 11.5 85 152-266 38-127 (303)
351 2v9d_A YAGE; dihydrodipicolini 90.8 9.6 0.00033 34.9 20.5 83 46-135 56-151 (343)
352 3tak_A DHDPS, dihydrodipicolin 90.8 8.5 0.00029 34.2 19.5 82 46-134 26-120 (291)
353 2ojp_A DHDPS, dihydrodipicolin 90.8 2.5 8.6E-05 37.8 11.7 90 152-271 28-122 (292)
354 3flu_A DHDPS, dihydrodipicolin 90.7 3 0.0001 37.4 12.1 87 152-268 34-125 (297)
355 2ehh_A DHDPS, dihydrodipicolin 90.7 2.4 8.2E-05 38.0 11.5 88 152-269 27-119 (294)
356 1o5k_A DHDPS, dihydrodipicolin 90.7 2.4 8.2E-05 38.3 11.5 89 152-270 39-132 (306)
357 1zlp_A PSR132, petal death pro 90.7 1.6 5.5E-05 39.8 10.3 119 46-167 120-258 (318)
358 1b9b_A TIM, protein (triosepho 90.6 0.76 2.6E-05 40.6 7.8 36 221-259 206-242 (255)
359 1i4n_A Indole-3-glycerol phosp 90.6 1.8 6.1E-05 38.1 10.2 87 208-301 88-183 (251)
360 3b4u_A Dihydrodipicolinate syn 90.6 2.4 8.3E-05 38.0 11.4 85 152-266 30-120 (294)
361 2yci_X 5-methyltetrahydrofolat 90.6 1.2 3.9E-05 39.8 9.1 83 46-137 38-125 (271)
362 1o5k_A DHDPS, dihydrodipicolin 90.6 9.3 0.00032 34.3 20.6 83 46-135 37-132 (306)
363 2bdq_A Copper homeostasis prot 90.5 0.18 6.2E-06 43.7 3.6 76 145-252 7-96 (224)
364 2hmc_A AGR_L_411P, dihydrodipi 90.5 10 0.00035 34.7 18.8 162 105-276 51-255 (344)
365 3l21_A DHDPS, dihydrodipicolin 90.5 2.9 9.9E-05 37.7 11.8 89 152-270 42-135 (304)
366 3qze_A DHDPS, dihydrodipicolin 90.5 2.5 8.6E-05 38.3 11.5 49 220-269 91-142 (314)
367 2r8w_A AGR_C_1641P; APC7498, d 90.4 2.6 8.7E-05 38.6 11.6 89 152-270 61-154 (332)
368 3tak_A DHDPS, dihydrodipicolin 90.3 3.3 0.00011 37.0 12.0 87 152-268 28-119 (291)
369 3daq_A DHDPS, dihydrodipicolin 90.3 2.5 8.6E-05 37.8 11.2 86 152-268 29-120 (292)
370 2nli_A Lactate oxidase; flavoe 90.2 0.82 2.8E-05 42.5 8.1 73 42-119 237-311 (368)
371 2v9d_A YAGE; dihydrodipicolini 90.2 2.9 9.8E-05 38.4 11.7 89 152-270 58-151 (343)
372 3gr7_A NADPH dehydrogenase; fl 90.2 0.85 2.9E-05 41.9 8.1 71 46-119 233-305 (340)
373 2wkj_A N-acetylneuraminate lya 90.1 10 0.00035 34.0 18.3 82 46-134 36-130 (303)
374 1f6k_A N-acetylneuraminate lya 90.1 2.3 8E-05 38.0 10.8 87 152-268 30-122 (293)
375 3zwt_A Dihydroorotate dehydrog 90.0 0.63 2.1E-05 43.4 7.1 74 46-119 238-325 (367)
376 3si9_A DHDPS, dihydrodipicolin 89.9 2.9 9.9E-05 37.9 11.3 87 152-268 49-140 (315)
377 2vef_A Dihydropteroate synthas 89.7 1 3.4E-05 41.1 8.1 91 46-139 37-131 (314)
378 2rfg_A Dihydrodipicolinate syn 89.7 2.6 8.8E-05 37.9 10.8 49 220-269 68-119 (297)
379 2vc6_A MOSA, dihydrodipicolina 89.6 2.3 7.8E-05 38.1 10.4 87 152-268 27-118 (292)
380 3m5v_A DHDPS, dihydrodipicolin 89.6 3.3 0.00011 37.2 11.5 89 152-270 34-128 (301)
381 1p4c_A L(+)-mandelate dehydrog 89.5 0.7 2.4E-05 43.2 7.1 73 42-119 233-305 (380)
382 3na8_A Putative dihydrodipicol 89.3 2.9 9.9E-05 37.9 10.9 89 152-270 51-144 (315)
383 3o1n_A 3-dehydroquinate dehydr 89.1 2 6.9E-05 38.3 9.5 115 47-167 57-197 (276)
384 3d0c_A Dihydrodipicolinate syn 89.1 2 6.8E-05 39.0 9.6 47 220-268 80-129 (314)
385 2nql_A AGR_PAT_674P, isomerase 89.1 4.4 0.00015 37.6 12.3 43 209-253 247-290 (388)
386 1rvg_A Fructose-1,6-bisphospha 88.9 13 0.00044 33.5 17.6 195 41-274 23-270 (305)
387 3i65_A Dihydroorotate dehydrog 88.9 0.62 2.1E-05 44.1 6.2 74 46-119 287-372 (415)
388 2y5s_A DHPS, dihydropteroate s 88.8 1.1 3.7E-05 40.5 7.5 83 46-137 50-140 (294)
389 3fkr_A L-2-keto-3-deoxyarabona 88.8 3.9 0.00013 36.9 11.3 85 152-266 35-127 (309)
390 2qjg_A Putative aldolase MJ040 88.7 2.7 9.2E-05 36.8 10.0 114 45-166 102-237 (273)
391 3e96_A Dihydrodipicolinate syn 88.7 13 0.00045 33.4 16.3 163 105-276 37-234 (316)
392 1k66_A Phytochrome response re 88.6 4.8 0.00017 30.4 10.5 61 210-277 78-141 (149)
393 1ydn_A Hydroxymethylglutaryl-C 88.5 4.1 0.00014 36.3 11.2 167 46-252 30-231 (295)
394 1ep3_A Dihydroorotate dehydrog 88.4 0.77 2.6E-05 41.1 6.3 75 45-119 179-268 (311)
395 3txv_A Probable tagatose 6-pho 88.3 14 0.00047 35.2 15.0 81 210-293 244-328 (450)
396 1mzh_A Deoxyribose-phosphate a 88.3 1.6 5.6E-05 37.5 8.1 64 46-118 136-201 (225)
397 2fiq_A Putative tagatose 6-pho 88.3 5.8 0.0002 37.5 12.4 49 208-257 235-286 (420)
398 3eez_A Putative mandelate race 88.2 4.6 0.00016 37.4 11.7 46 209-256 225-271 (378)
399 1vcf_A Isopentenyl-diphosphate 88.1 1.1 3.8E-05 40.8 7.3 76 43-119 193-283 (332)
400 3d0c_A Dihydrodipicolinate syn 88.1 15 0.0005 33.1 18.5 82 46-134 37-130 (314)
401 3bw2_A 2-nitropropane dioxygen 87.9 1.3 4.4E-05 41.0 7.7 78 38-119 148-235 (369)
402 3hgj_A Chromate reductase; TIM 87.9 1.5 5.2E-05 40.3 8.1 83 46-131 243-329 (349)
403 4gbu_A NADPH dehydrogenase 1; 87.7 0.22 7.4E-06 47.0 2.3 52 216-276 313-365 (400)
404 1gox_A (S)-2-hydroxy-acid oxid 87.7 1.7 5.7E-05 40.4 8.3 74 41-119 232-307 (370)
405 1tv5_A Dhodehase, dihydroorota 87.7 0.99 3.4E-05 43.1 6.8 74 46-119 315-400 (443)
406 2og9_A Mandelate racemase/muco 87.6 3.6 0.00012 38.3 10.7 42 209-252 246-288 (393)
407 1rvk_A Isomerase/lactonizing e 87.6 5.5 0.00019 36.7 11.9 43 209-253 239-283 (382)
408 3a5f_A Dihydrodipicolinate syn 87.6 2.7 9.1E-05 37.6 9.3 85 152-266 28-117 (291)
409 2ovl_A Putative racemase; stru 87.6 8.7 0.0003 35.3 13.2 52 209-264 230-282 (371)
410 1z41_A YQJM, probable NADH-dep 87.5 1.5 5E-05 40.2 7.7 71 46-119 233-305 (338)
411 2qgy_A Enolase from the enviro 87.5 8.6 0.0003 35.6 13.2 42 209-252 233-275 (391)
412 3eol_A Isocitrate lyase; seatt 87.5 5.9 0.0002 37.5 11.9 224 38-306 64-397 (433)
413 2qiw_A PEP phosphonomutase; st 87.5 2.8 9.7E-05 36.9 9.3 130 28-166 81-236 (255)
414 3h5d_A DHDPS, dihydrodipicolin 87.4 16 0.00054 32.9 19.5 83 46-135 32-128 (311)
415 2p8b_A Mandelate racemase/muco 87.4 5.3 0.00018 36.7 11.5 44 209-254 225-269 (369)
416 1p0k_A Isopentenyl-diphosphate 87.3 1.7 5.9E-05 39.8 8.1 77 43-119 190-278 (349)
417 3vzx_A Heptaprenylglyceryl pho 87.3 0.55 1.9E-05 40.8 4.4 49 80-129 167-217 (228)
418 2nzl_A Hydroxyacid oxidase 1; 87.2 1.4 4.9E-05 41.3 7.5 62 208-272 239-304 (392)
419 3qfe_A Putative dihydrodipicol 87.1 17 0.00058 32.8 19.6 67 46-119 36-111 (318)
420 2v5b_A Triosephosphate isomera 87.1 8.8 0.0003 33.5 12.1 36 221-260 199-235 (244)
421 4dpp_A DHDPS 2, dihydrodipicol 86.8 4.7 0.00016 37.3 10.7 84 152-266 86-175 (360)
422 1vhn_A Putative flavin oxidore 86.8 1.2 4E-05 40.4 6.6 82 45-133 143-226 (318)
423 3krs_A Triosephosphate isomera 86.6 5.4 0.00019 35.4 10.6 34 221-257 226-260 (271)
424 1f8m_A Isocitrate lyase, ICL; 86.6 3 0.0001 39.5 9.4 36 28-64 149-184 (429)
425 1kbi_A Cytochrome B2, L-LCR; f 86.6 1.5 5.3E-05 42.6 7.6 61 209-272 331-395 (511)
426 3fkr_A L-2-keto-3-deoxyarabona 86.5 18 0.0006 32.5 16.7 82 46-134 33-130 (309)
427 3qst_A Triosephosphate isomera 86.5 5.2 0.00018 35.2 10.4 34 221-257 207-241 (255)
428 2hmc_A AGR_L_411P, dihydrodipi 86.5 5.5 0.00019 36.6 11.0 50 220-270 91-144 (344)
429 1f76_A Dihydroorotate dehydrog 86.4 0.9 3.1E-05 41.4 5.6 74 46-119 229-316 (336)
430 3e96_A Dihydrodipicolinate syn 86.4 2.9 9.8E-05 37.9 9.0 47 220-269 80-130 (316)
431 2qde_A Mandelate racemase/muco 86.3 6.1 0.00021 36.7 11.4 41 209-251 228-269 (397)
432 3h5d_A DHDPS, dihydrodipicolin 86.3 7.8 0.00027 34.9 11.8 88 152-270 34-128 (311)
433 1f6k_A N-acetylneuraminate lya 86.3 17 0.0006 32.2 18.0 161 105-275 28-226 (293)
434 2hjp_A Phosphonopyruvate hydro 86.2 4.8 0.00017 36.1 10.2 120 46-166 94-235 (290)
435 3o07_A Pyridoxine biosynthesis 86.2 2.8 9.5E-05 37.5 8.3 83 141-250 13-95 (291)
436 2ze3_A DFA0005; organic waste 86.1 7.5 0.00026 34.5 11.3 114 46-166 96-232 (275)
437 3f4w_A Putative hexulose 6 pho 86.0 0.82 2.8E-05 38.5 4.8 71 42-119 113-185 (211)
438 3s5o_A 4-hydroxy-2-oxoglutarat 86.0 19 0.00064 32.3 19.1 83 46-135 39-136 (307)
439 1sfl_A 3-dehydroquinate dehydr 85.9 2.6 8.9E-05 36.6 8.1 116 46-167 21-163 (238)
440 3l5l_A Xenobiotic reductase A; 85.8 1.6 5.4E-05 40.4 7.0 71 46-119 250-323 (363)
441 2oz8_A MLL7089 protein; struct 85.8 4.7 0.00016 37.4 10.4 45 209-256 231-277 (389)
442 3dz1_A Dihydrodipicolinate syn 85.7 6.3 0.00022 35.6 10.9 84 152-266 35-122 (313)
443 1jub_A Dihydroorotate dehydrog 85.7 1.3 4.3E-05 39.9 6.1 39 81-119 229-269 (311)
444 2isw_A Putative fructose-1,6-b 85.6 21 0.00071 32.4 16.7 181 41-256 24-259 (323)
445 3to5_A CHEY homolog; alpha(5)b 85.5 11 0.00038 29.3 13.5 52 210-268 73-127 (134)
446 3eb2_A Putative dihydrodipicol 85.5 1.9 6.6E-05 38.8 7.3 50 220-270 72-124 (300)
447 3b0p_A TRNA-dihydrouridine syn 85.5 2.5 8.5E-05 38.9 8.1 70 46-119 148-223 (350)
448 3mcm_A 2-amino-4-hydroxy-6-hyd 85.4 2 6.7E-05 41.0 7.5 84 46-137 216-315 (442)
449 1k68_A Phytochrome response re 85.3 9.5 0.00032 28.3 11.3 60 210-276 71-133 (140)
450 3qfe_A Putative dihydrodipicol 85.3 7.3 0.00025 35.2 11.1 85 152-266 38-129 (318)
451 3ozy_A Putative mandelate race 85.1 5.7 0.0002 36.9 10.6 107 105-251 157-276 (389)
452 2cu0_A Inosine-5'-monophosphat 85.0 3.3 0.00011 39.8 9.0 110 45-168 230-359 (486)
453 2zad_A Muconate cycloisomerase 84.9 11 0.00037 34.2 12.2 41 209-251 223-264 (345)
454 2r91_A 2-keto-3-deoxy-(6-phosp 84.9 20 0.00069 31.6 17.1 172 93-275 9-215 (286)
455 1rqb_A Transcarboxylase 5S sub 84.8 21 0.00071 34.8 14.6 169 46-252 51-252 (539)
456 1zco_A 2-dehydro-3-deoxyphosph 84.7 6.3 0.00021 34.7 10.1 107 105-252 41-165 (262)
457 3g8r_A Probable spore coat pol 84.7 5.4 0.00019 36.8 9.9 74 137-250 89-166 (350)
458 3stp_A Galactonate dehydratase 84.7 10 0.00034 35.6 12.1 42 209-252 269-311 (412)
459 2qdd_A Mandelate racemase/muco 84.5 4.6 0.00016 37.2 9.6 46 209-256 225-271 (378)
460 3vkj_A Isopentenyl-diphosphate 84.5 1.3 4.5E-05 41.2 5.8 140 90-254 57-220 (368)
461 1yad_A Regulatory protein TENI 84.4 2.4 8.2E-05 35.9 7.0 75 41-119 116-190 (221)
462 2yr1_A 3-dehydroquinate dehydr 84.3 16 0.00054 32.0 12.5 114 47-167 37-177 (257)
463 3jva_A Dipeptide epimerase; en 84.3 12 0.00041 34.1 12.3 43 209-253 222-265 (354)
464 3dg3_A Muconate cycloisomerase 84.3 12 0.0004 34.4 12.3 41 209-251 224-265 (367)
465 1xi3_A Thiamine phosphate pyro 84.2 1.4 4.9E-05 36.8 5.5 74 41-119 114-188 (215)
466 2r91_A 2-keto-3-deoxy-(6-phosp 84.1 14 0.00048 32.7 12.3 88 152-270 25-116 (286)
467 3sz8_A 2-dehydro-3-deoxyphosph 84.1 10 0.00035 33.8 11.2 93 74-167 117-244 (285)
468 3th6_A Triosephosphate isomera 84.1 6.3 0.00022 34.5 9.6 34 221-257 203-237 (249)
469 3nvt_A 3-deoxy-D-arabino-heptu 84.0 5.5 0.00019 37.2 9.8 105 105-251 160-282 (385)
470 3i4e_A Isocitrate lyase; struc 83.9 3.5 0.00012 39.2 8.4 36 28-64 153-188 (439)
471 3k13_A 5-methyltetrahydrofolat 83.7 3.7 0.00013 37.0 8.2 85 46-142 41-138 (300)
472 2ps2_A Putative mandelate race 83.7 8.4 0.00029 35.3 11.0 42 209-252 227-269 (371)
473 3s5o_A 4-hydroxy-2-oxoglutarat 83.6 7.6 0.00026 34.9 10.4 87 152-268 41-134 (307)
474 2gdq_A YITF; mandelate racemas 83.5 8.2 0.00028 35.7 10.8 41 209-251 224-265 (382)
475 2hzg_A Mandelate racemase/muco 83.4 14 0.00048 34.2 12.5 46 209-256 234-281 (401)
476 3nav_A Tryptophan synthase alp 83.4 19 0.00064 31.8 12.6 108 46-166 116-237 (271)
477 2nv1_A Pyridoxal biosynthesis 83.4 4.8 0.00017 36.0 9.0 82 145-256 27-110 (305)
478 3s1x_A Probable transaldolase; 83.4 5.1 0.00017 34.5 8.6 84 81-166 94-188 (223)
479 3b4u_A Dihydrodipicolinate syn 83.3 24 0.00082 31.3 18.6 67 46-119 28-103 (294)
480 3o63_A Probable thiamine-phosp 83.3 1.7 6E-05 37.9 5.8 75 40-119 140-217 (243)
481 3tjx_A Dihydroorotate dehydrog 83.3 9.8 0.00034 34.7 11.2 110 53-166 153-306 (354)
482 4dwd_A Mandelate racemase/muco 83.3 8.7 0.0003 35.8 11.0 42 209-252 230-271 (393)
483 1f6y_A 5-methyltetrahydrofolat 83.2 5.7 0.0002 35.0 9.2 62 46-119 29-96 (262)
484 1w3i_A EDA, 2-keto-3-deoxy glu 83.2 15 0.00051 32.6 12.1 88 152-270 26-117 (293)
485 2h9a_B CO dehydrogenase/acetyl 83.0 6 0.0002 35.8 9.4 110 46-160 78-199 (310)
486 3kht_A Response regulator; PSI 83.0 13 0.00045 28.0 12.5 61 209-276 66-130 (144)
487 3f6p_A Transcriptional regulat 82.8 12 0.00041 27.4 11.5 56 210-272 62-117 (120)
488 2zbt_A Pyridoxal biosynthesis 82.7 4.6 0.00016 35.9 8.5 82 141-249 23-104 (297)
489 2nx9_A Oxaloacetate decarboxyl 82.7 34 0.0012 32.6 16.7 169 46-252 34-233 (464)
490 2pp0_A L-talarate/galactarate 82.7 8.2 0.00028 35.9 10.5 42 209-252 259-301 (398)
491 2nuw_A 2-keto-3-deoxygluconate 82.6 16 0.00055 32.4 12.0 88 152-270 26-117 (288)
492 1tzz_A Hypothetical protein L1 82.3 15 0.00051 34.0 12.2 43 209-253 249-296 (392)
493 3gl9_A Response regulator; bet 81.9 13 0.00045 27.3 12.4 55 210-271 62-119 (122)
494 3noy_A 4-hydroxy-3-methylbut-2 81.7 3.4 0.00012 38.2 7.2 86 104-190 49-138 (366)
495 3sz8_A 2-dehydro-3-deoxyphosph 81.2 21 0.00071 31.9 12.1 81 81-166 80-169 (285)
496 3q9s_A DNA-binding response re 81.1 24 0.00083 29.8 13.2 58 210-274 97-154 (249)
497 2yxb_A Coenzyme B12-dependent 81.1 13 0.00043 30.0 9.9 37 212-251 89-127 (161)
498 3o6c_A PNP synthase, pyridoxin 81.0 28 0.00096 30.5 13.0 109 46-167 29-153 (260)
499 1ps9_A 2,4-dienoyl-COA reducta 81.0 3.1 0.0001 41.5 7.3 85 46-134 232-324 (671)
500 3noy_A 4-hydroxy-3-methylbut-2 80.9 2.9 9.8E-05 38.7 6.4 60 46-118 50-109 (366)
No 1
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=100.00 E-value=5.5e-46 Score=331.98 Aligned_cols=276 Identities=61% Similarity=1.009 Sum_probs=243.9
Q ss_pred hhhCcccccCCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHH
Q 021575 33 MLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEA 112 (310)
Q Consensus 33 ~~~~g~i~~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~ 112 (310)
+|++|+|++++++++|+.++++||.+++.|+.+|.++|.++|.+++.+++.|++|++++++||+.+.+++++.++|.+++
T Consensus 9 ~~~~~vimdv~~~eqa~iae~aGa~av~~l~~~p~d~r~~gGv~Rm~dp~~I~~I~~aVsIPVm~k~righ~~EAqilea 88 (291)
T 3o07_A 9 MLKGGVIMDVVTPEQAKIAEKSGACAVMALESIPADMRKSGKVCRMSDPKMIKDIMNSVSIPVMAKVRIGHFVEAQIIEA 88 (291)
T ss_dssp -CTTCEEEEESSHHHHHHHHHHTCSEEEECSSCHHHHHTTTCCCCCCCHHHHHHHHTTCSSCEEEEEETTCHHHHHHHHH
T ss_pred cccCCeeeecCCHHHHHHHHHhCchhhhhccCCCchhhhcCCccccCCHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHH
Confidence 56699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeec
Q 021575 113 IGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLR 192 (310)
Q Consensus 113 aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~ 192 (310)
+|+|+|..++.++|.+....+.++.++++++++|+|.+|++++.+.|+++|.+.|..+||++.++++++|.....++.+.
T Consensus 89 ~GaD~IDesevltpad~~~~I~k~~f~vpfv~~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~r~~~~~i~~l~ 168 (291)
T 3o07_A 89 LEVDYIDESEVLTPADWTHHIEKDKFKVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIKACQ 168 (291)
T ss_dssp TTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEecccCCCHHHHHHHhhhhcCCCcEEeeCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHHHHHHHHHHHHH
Confidence 99999988888888888888877778999999999999999999999999999998889999999999999988888888
Q ss_pred cc-ChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHH
Q 021575 193 NM-DDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRA 271 (310)
Q Consensus 193 ~~-~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~ 271 (310)
.. ++++++.++++..++|++++++++..++||++|++|||.|++|+.+++++|||||+|||++++++||...+++|+++
T Consensus 169 g~~t~~el~~~a~~~~ad~elI~~Ike~~~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~s~DP~~~Akafv~A 248 (291)
T 3o07_A 169 QLKSEDDIAKVAEEMRVPVSLLKDVLEKGKLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSSNPVRLATAVVEA 248 (291)
T ss_dssp TCCCHHHHHHHHHHHTSCHHHHHHHHHHTSCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHH
T ss_pred cCCCHHHhhhcccccCCCHHHHHHHHHccCCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhCCCCHHHHHHHHHHH
Confidence 88 77777667777788999999999888999976689999999999999999999999999999999999999999999
Q ss_pred HhccCChhhhhhhhhhcccchhcccCccc---h-hhhhccc
Q 021575 272 VTHYSDPEVLAEVSCGLGEAMVGLNLSDH---K-VERFASR 308 (310)
Q Consensus 272 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~ 308 (310)
+++|.+|..+.++++.+|++|+|++.+.+ + -||++.|
T Consensus 249 v~~~~~~~~~~~~s~~l~~~m~g~~~~~~~~~~~~~~~~~r 289 (291)
T 3o07_A 249 TTHFDNPSKLLEVSSDLGELMGGVSIESISHASNGVRLSEI 289 (291)
T ss_dssp HHTTTCHHHHHHHHSSCCCC---------------------
T ss_pred HHhccCHHHHHHHHhcccccccCcchhhhccCchHHHHhhc
Confidence 99999999999999999999999999998 3 4566665
No 2
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=3e-43 Score=323.11 Aligned_cols=289 Identities=63% Similarity=0.957 Sum_probs=242.8
Q ss_pred cCcceeecchhhhhhCcccccCCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccc
Q 021575 21 KSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKAR 100 (310)
Q Consensus 21 ~~~~~~~~~~~~~~~~g~i~~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~ 100 (310)
+++|.+++++.+++++|+|++++.+++|+.++++||.+|+.|+|.|++++.++|++++.+++.++++++++++||+.|++
T Consensus 3 ~~~~~~~~~~~~~~kgGvI~d~~~~e~A~~ae~aGA~aI~~l~~v~~d~~~~~G~arm~~p~~i~~I~~av~iPV~~K~r 82 (330)
T 2yzr_A 3 KGTDLLKKGFAKMVKHGVVMDVTNVEQAQIAEEAGAVAVMALERVPADIRAAGGVARMSDPALIEEIMDAVSIPVMAKCR 82 (330)
T ss_dssp --CTHHHHHHHHTTTTSEEEEESSHHHHHHHHHHTCSEEEECSSCHHHHC--CCCCCCCCHHHHHHHHHHCSSCEEEEEE
T ss_pred CccHHHHHHHHHHccCCceeeCCHHHHHHHHHHcCCCEEEecCCccccccCCcchhhcCCHHHHHHHHHhcCCCeEEEEe
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHH
Q 021575 101 IGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRH 180 (310)
Q Consensus 101 ~~~~~~a~~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~ 180 (310)
+++++.+|.++++|||.|+.+..+++.+....+.++.++.+++.++++..|+.+....|+++|.+||-.++++++++++|
T Consensus 83 ig~~~e~qilea~GaD~Id~s~~l~p~d~~~~i~k~~~~~~~~~~a~~lgea~r~~~~Ga~~i~t~ge~g~~~~ve~v~H 162 (330)
T 2yzr_A 83 IGHTTEALVLEAIGVDMIDESEVLTQADPFFHIYKKKFNVPFVCGARNLGEAVRRIWEGAAMIRTKGEAGTGNIVEAVRH 162 (330)
T ss_dssp TTCHHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEECSSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHH
T ss_pred ecchHHHHHHHHcCCCEEehhccCCHHHHHHHhhhhhcccchhhccccHHHHHHHHhcCcceeeccCCCCcccchhHHHH
Confidence 99999999999999999987776777666444545557899999999999999999999999999998889999999999
Q ss_pred HHhhccceEeecccChhHHHHhhhccCCcH-------------------------------------HHHHHHhhcCCCC
Q 021575 181 VRSVMGDIRVLRNMDDDEVFTFAKKIAAPY-------------------------------------DLVMQTKQLGRLP 223 (310)
Q Consensus 181 ~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~-------------------------------------~~i~~i~~~~~iP 223 (310)
+|.....++.+...+.++++..+...+.++ ++++++++..++|
T Consensus 163 ~r~~~~~~~~~s~~~~~El~~~A~~~gadyv~~~~~vt~~~G~~~r~Lg~G~Vf~T~TK~~~~~~~lell~~i~~~~~IP 242 (330)
T 2yzr_A 163 MRLMNEAIAQLQRMTDEEVYGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKLGRLP 242 (330)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHHHHHGGGGHHHHHHHHHTTSCSCCCTTSEEETTEEHHHHHHHHHHHHHHHHHHTSCS
T ss_pred HHHHHHHHHHhccCCHHHHHHHHHHcCCCEeecccchhhhccccccccccccccCCCcccCCCcchHHHHHHHHHhCCCC
Confidence 988776777777777777753332223333 8888888877899
Q ss_pred EEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhccCChhhhhhhhhhcccchhcccCccchh-
Q 021575 224 VVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV- 302 (310)
Q Consensus 224 Vi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 302 (310)
|+.++.|||.|++|+.+++++|||||+|||+|++++||...+++|+++++++.+|+.+.++++.+|++|+|++++.++.
T Consensus 243 VV~VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~a~dP~~aar~l~~ai~~~~~~~~~~~~s~~~~~~m~g~~~~~~~~~ 322 (330)
T 2yzr_A 243 VVNFAAGGVATPADAALMMQLGSDGVFVGSGIFKSENPLERARAIVEATYNYDKPDIVAEVSKNLGEAMKGIDITQISEA 322 (330)
T ss_dssp SEEEECSCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHHTTTCHHHHHHHHTTCCCCCCC---------
T ss_pred eEEEEECCCCCHHHHHHHHHcCcCEEeeHHHHhcCCCHHHHHHHHHHHHHhcCCHHHHHHHHhcccccCcCccccccChh
Confidence 9644889999999999999999999999999999999999999999999999999999999999999999999999964
Q ss_pred hhhcccC
Q 021575 303 ERFASRS 309 (310)
Q Consensus 303 ~~~~~~~ 309 (310)
+|++.|.
T Consensus 323 ~~~~~~~ 329 (330)
T 2yzr_A 323 EKMQYRG 329 (330)
T ss_dssp -------
T ss_pred hHhhhcC
Confidence 4887763
No 3
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=100.00 E-value=2e-40 Score=304.68 Aligned_cols=281 Identities=60% Similarity=0.965 Sum_probs=243.2
Q ss_pred CcceeecchhhhhhCcccccCCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeecccc
Q 021575 22 SPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARI 101 (310)
Q Consensus 22 ~~~~~~~~~~~~~~~g~i~~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~ 101 (310)
++|.+++|+.+++|+|.++++.++++|+.|+++||++|+.|+..|+++++++|..+..+++.++++++.+++||+++.++
T Consensus 8 ~~~~~~~~~~~~~kggv~~d~~~~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v~iPvl~k~~i 87 (297)
T 4adt_A 8 DSILLKHGWCEMLKGGVIMDVKNVEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCISINVLAKVRI 87 (297)
T ss_dssp HHHHHHHHHHHTTTTCEEEEESSHHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTCCSEEEEEEET
T ss_pred CcHHHHHhHHHHhcCCcccCCCcHHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhcCCCEEEeccC
Confidence 57899999999999999999999999999999999999888766678899999778888999999999999999999888
Q ss_pred CcHHHHHHHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHH
Q 021575 102 GHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 181 (310)
Q Consensus 102 ~~~~~a~~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~ 181 (310)
++.+++|.++++|||.|..+..+++.++.+.+++++++++++++++|.+|+.++.+.|+|+|.++|+.+|+++.++++|.
T Consensus 88 ~~ide~qil~aaGAD~Id~s~~~~~~~li~~i~~~~~g~~vvv~v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~~~v~h~ 167 (297)
T 4adt_A 88 GHFVEAQILEELKVDMLDESEVLTMADEYNHINKHKFKTPFVCGCTNLGEALRRISEGASMIRTKGEAGTGNIIEAIKHI 167 (297)
T ss_dssp TCHHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCCHHHHHHH
T ss_pred CcHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhCCCCEEEECCCcCCCchHHHHHHH
Confidence 88899999999999999555555677777777665678999999999999999999999999999988888888999999
Q ss_pred HhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCH
Q 021575 182 RSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDP 261 (310)
Q Consensus 182 r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp 261 (310)
++....+|.++.+++|++..++....+++++++++++..++|++++++|||++++|+.+++++|||+|+|||+|++++||
T Consensus 168 ~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a~dp 247 (297)
T 4adt_A 168 RTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLTRKLKRLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFESENP 247 (297)
T ss_dssp HHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHTSCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTSSCH
T ss_pred HHhhhhhhhhccccccccccccccCCCCHHHHHHHHHhcCCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcCCCH
Confidence 88765577778887777655544556789999999888889987557899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCChhhhhhhhhhcccchhcccCccchh
Q 021575 262 VKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV 302 (310)
Q Consensus 262 ~~~a~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (310)
...+++|++++++|.+++.+.++++.+|++|+|++++.++-
T Consensus 248 ~~~~~~l~~ai~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 288 (297)
T 4adt_A 248 QKMASSIVMAVSNFNNPKILLNVSLGLGKAMHGNTKVSNKW 288 (297)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTTTCCCCCCCCCC-----
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHhhcccCCCCCCcccccc
Confidence 99999999999999999999999999999999999988764
No 4
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=100.00 E-value=1.3e-33 Score=261.89 Aligned_cols=288 Identities=64% Similarity=1.018 Sum_probs=215.2
Q ss_pred cCcceeecchhhhhhCcccccCCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccc
Q 021575 21 KSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKAR 100 (310)
Q Consensus 21 ~~~~~~~~~~~~~~~~g~i~~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~ 100 (310)
.++|.+++++.+++++|++++++..++|+.++++|+++|.+|+|.|.+.+.++|+.++.+++.++++++.+++|++++++
T Consensus 7 ~~~~~~~~~~~~~~~~g~i~~~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~~iPv~~k~r 86 (305)
T 2nv1_A 7 TGTERVKRGMAEMQKGGVIMDVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKAR 86 (305)
T ss_dssp --CHHHHHHHHHTTTTCEEEEESSHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHCSSCEEEEEC
T ss_pred CCcHHHHHHHHHHccCCeeecCCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhCCCCEEeccc
Confidence 46899999999999999999888889999999999999877888888878778877888899999999999999999999
Q ss_pred cCcHHHHHHHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHH
Q 021575 101 IGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRH 180 (310)
Q Consensus 101 ~~~~~~a~~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~ 180 (310)
+++.+.++.+.++|||+|+.+..+++.++.+.+..+.+++++++++++.+++.++.+.|+|+|.++||.+++.+.++..+
T Consensus 87 ~g~~~~~~~~~a~GAd~V~~~~~l~~~~~~~~i~~~~~g~~v~~~~~~~~e~~~a~~~Gad~V~~~G~~g~g~~~~~~~h 166 (305)
T 2nv1_A 87 IGHIVEARVLEAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTGNIVEAVRH 166 (305)
T ss_dssp TTCHHHHHHHHHHTCSEEEECTTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECCCTTSCCTHHHHHH
T ss_pred ccchHHHHHHHHCCCCEEEEeccCCHHHHHHHHHHhccCCcEEEEeCCHHHHHHHHHCCCCEEEeccccCccchHHHHhh
Confidence 87778899999999999986666666655544443456889999999999999999999999999998776777777777
Q ss_pred HHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCC
Q 021575 181 VRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGD 260 (310)
Q Consensus 181 ~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~d 260 (310)
.+.....++.+..++.++++.+.......+++++++++..++||+.+++|||+|++|+.+++.+|||+|+|||+|++++|
T Consensus 167 ~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~~~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~~~ 246 (305)
T 2nv1_A 167 MRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDN 246 (305)
T ss_dssp HHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHTSCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGSSC
T ss_pred hhhhhccchhhccccchhhhcccccccccHHHHHHHHHhcCCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcCCC
Confidence 65422122223334444433222223556888888888778998755789999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCChhhhhhhhhhcccchhcccCccchhh-hhccc
Q 021575 261 PVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVE-RFASR 308 (310)
Q Consensus 261 p~~~a~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 308 (310)
|...+++|++.++++.+++.+.++++.+|.+|.++++++++.| |++.|
T Consensus 247 p~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 295 (305)
T 2nv1_A 247 PAKFAKAIVEATTHFTDYKLIAELSKELGTAMKGIEISNLLPEQRMQER 295 (305)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHTSCC---------------------
T ss_pred HHHHHHHHHHHHHHhcChhhHHHHHHHhhhhhcCCChhhcchHHHHHhh
Confidence 9999999999999999999999999999999999999999764 77665
No 5
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=99.97 E-value=2.2e-29 Score=232.46 Aligned_cols=286 Identities=70% Similarity=1.092 Sum_probs=212.6
Q ss_pred eccCcceeecchhhhhhCcccccCCCHHHHHHHHHcCCcEEEecc-CCcccccccCCCCCCCCHHHHHHHHhhcCcceee
Q 021575 19 TKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALE-RVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMA 97 (310)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~g~i~~~~~~~~A~~~~~~Ga~~i~~L~-~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~v 97 (310)
-++++|.++.++.+++++++|.+++..++|+++.++|++++ +++ +.+.+.++++|+.+..+++.++++++.+++|+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~a~~~~~~Ga~~i-~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~~~~Pvi~ 83 (297)
T 2zbt_A 5 MEKGTFQIKTGFAEMFKGGVIMDVTTPEQAVIAEEAGAVAV-MALERVPADIRAQGGVARMSDPKIIKEIMAAVSIPVMA 83 (297)
T ss_dssp EEEEEEEECCSSSGGGTTEEEEEESSHHHHHHHHHHTCSEE-EECSSCHHHHHHTTCCCCCCCHHHHHHHHTTCSSCEEE
T ss_pred cccceehHHHHHHHHhhCCeeeeechHHHHHHHHHCCCcEE-EeccccchHHHhhcCCccCCCHHHHHHHHHhcCCCeEE
Confidence 35889999999999999999999999999999999999987 553 4555556667776778899999999999999998
Q ss_pred ccccCcHHHHHHHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHH
Q 021575 98 KARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEA 177 (310)
Q Consensus 98 k~~~~~~~~a~~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~ 177 (310)
+...++.++++.+.++|||+|..+...++.++.+.+++...++.+++++++.+++.++.+.|+|+|.++||.+.+.+.++
T Consensus 84 ~~~~~~~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~i~l~~~v~~~~~~~~a~~~Gad~I~v~G~~~~g~~~e~ 163 (297)
T 2zbt_A 84 KVRIGHFVEAMILEAIGVDFIDESEVLTPADEEHHIDKWKFKVPFVCGARNLGEALRRIAEGAAMIRTKGEAGTGNVVEA 163 (297)
T ss_dssp EEETTCHHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECCCSSSCCTHHH
T ss_pred EeccCCHHHHHHHHHCCCCEEeeeCCCChHHHHHHHHHhCCCceEEeecCCHHHHHHHHHcCCCEEEEcccccCcchHHH
Confidence 87777778899999999999964443344444444433345788888999999999999999999999988666665555
Q ss_pred HHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 021575 178 VRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 178 ~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~ 257 (310)
..+.+.+...++.+...++....+........++.++++++..++|++++++|||++++|+.+++++|||+|++||+|++
T Consensus 164 ~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~ 243 (297)
T 2zbt_A 164 VRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFK 243 (297)
T ss_dssp HHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHSSCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGG
T ss_pred HhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhcCCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhC
Confidence 55533322111111111111100000113455788888888778897534789999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCChhhhhhhhhhcccchhcccCccchhhhh
Q 021575 258 SGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVERF 305 (310)
Q Consensus 258 a~dp~~~a~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (310)
++||...+++|++.++++.+++.+.++++.+|.+++++.+..++-|.+
T Consensus 244 ~~dp~~~~~~l~~~i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 291 (297)
T 2zbt_A 244 SGDPRKRARAIVRAVAHYNDPEVLAEVSEDLGEPMVGINLDQLKEEER 291 (297)
T ss_dssp SSCHHHHHHHHHHHHHTTTCHHHHHHHHTTCCCCC-------------
T ss_pred CCCHHHHHHHHHHHHHHHhchHhhhHHHHhcCceeEEeechhcccccc
Confidence 999999999999999999999999999999999999999988766543
No 6
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=99.92 E-value=1.5e-23 Score=190.32 Aligned_cols=192 Identities=15% Similarity=0.228 Sum_probs=154.6
Q ss_pred CcccccCCCH-HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcC
Q 021575 36 GGVIMDVVTP-EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIG 114 (310)
Q Consensus 36 ~g~i~~~~~~-~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aG 114 (310)
+|+|....+| ++|+.|+++||++|..| ++...|+|+ ++.++.+++.+++||+.|+++.+..++..+.++|
T Consensus 72 kG~i~~~~dp~~~A~~y~~~GA~~IsVl----td~~~f~Gs-----~~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~G 142 (272)
T 3tsm_A 72 KGLIRPDFDPPALAKAYEEGGAACLSVL----TDTPSFQGA-----PEFLTAARQACSLPALRKDFLFDPYQVYEARSWG 142 (272)
T ss_dssp TEESCSSCCHHHHHHHHHHTTCSEEEEE----CCSTTTCCC-----HHHHHHHHHTSSSCEEEESCCCSTHHHHHHHHTT
T ss_pred CCccCCCCCHHHHHHHHHHCCCCEEEEe----ccccccCCC-----HHHHHHHHHhcCCCEEECCccCCHHHHHHHHHcC
Confidence 4777777777 79999999999999655 455667666 8999999999999999999987656677788999
Q ss_pred CCEEE-eCCCCCchhHHHHHHh-cCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeec
Q 021575 115 IDYVD-ESEVLTPADEENHINK-HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLR 192 (310)
Q Consensus 115 ad~Vi-~~~~~~~~~~~~~i~~-~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~ 192 (310)
||+|+ ++..++..++.++++. +..++.+++++||.+|+.++.++|+++|+++++...
T Consensus 143 AD~VlLi~a~L~~~~l~~l~~~a~~lGl~~lvevh~~eEl~~A~~~ga~iIGinnr~l~--------------------- 201 (272)
T 3tsm_A 143 ADCILIIMASVDDDLAKELEDTAFALGMDALIEVHDEAEMERALKLSSRLLGVNNRNLR--------------------- 201 (272)
T ss_dssp CSEEEEETTTSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHTTSCCSEEEEECBCTT---------------------
T ss_pred CCEEEEcccccCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCEEEECCCCCc---------------------
Confidence 99995 7777777777776655 557899999999999999999999999999876421
Q ss_pred ccChhHHHHhhhccCCcHHHHHHHhhcC--CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHH
Q 021575 193 NMDDDEVFTFAKKIAAPYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVR 270 (310)
Q Consensus 193 ~~~~d~~~~~~~~~~~~~~~i~~i~~~~--~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~ 270 (310)
++ ..+++...++.+.. ++|++ ++|||+|++|+.++.++|+|||+||++||+++||....++|+.
T Consensus 202 t~------------~~dl~~~~~L~~~ip~~~~vI--aesGI~t~edv~~l~~~Ga~gvLVG~almr~~d~~~~~~~l~~ 267 (272)
T 3tsm_A 202 SF------------EVNLAVSERLAKMAPSDRLLV--GESGIFTHEDCLRLEKSGIGTFLIGESLMRQHDVAAATRALLT 267 (272)
T ss_dssp TC------------CBCTHHHHHHHHHSCTTSEEE--EESSCCSHHHHHHHHTTTCCEEEECHHHHTSSCHHHHHHHHHH
T ss_pred cC------------CCChHHHHHHHHhCCCCCcEE--EECCCCCHHHHHHHHHcCCCEEEEcHHHcCCcCHHHHHHHHHh
Confidence 11 12233333333322 57887 7899999999999999999999999999999999988888765
Q ss_pred H
Q 021575 271 A 271 (310)
Q Consensus 271 ~ 271 (310)
.
T Consensus 268 g 268 (272)
T 3tsm_A 268 G 268 (272)
T ss_dssp C
T ss_pred c
Confidence 3
No 7
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=99.91 E-value=1.2e-23 Score=191.45 Aligned_cols=197 Identities=23% Similarity=0.292 Sum_probs=152.8
Q ss_pred CcccccCCCH-HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcC
Q 021575 36 GGVIMDVVTP-EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIG 114 (310)
Q Consensus 36 ~g~i~~~~~~-~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aG 114 (310)
+|+|....+| ++|+.|+++||++|..+ ++..+|.|+ ++.++++++.+++|+++++++-+...+..+.++|
T Consensus 65 ~g~i~~~~~p~~~A~~y~~~GA~~isvl----td~~~f~Gs-----~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~G 135 (272)
T 3qja_A 65 AGALATIADPAKLAQAYQDGGARIVSVV----TEQRRFQGS-----LDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHG 135 (272)
T ss_dssp --------CHHHHHHHHHHTTCSEEEEE----CCGGGHHHH-----HHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT
T ss_pred CCccCCCCCHHHHHHHHHHcCCCEEEEe----cChhhcCCC-----HHHHHHHHHhCCCCEEECccccCHHHHHHHHHcC
Confidence 4666666676 78999999999999555 456777777 8899999999999999999876544578889999
Q ss_pred CCEEE-eCCCCCchhHHHHHHh-cCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeec
Q 021575 115 IDYVD-ESEVLTPADEENHINK-HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLR 192 (310)
Q Consensus 115 ad~Vi-~~~~~~~~~~~~~i~~-~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~ 192 (310)
||+|+ +...+++.++.+++.. +..++.++++++|.+|+.++.++|+|+|+++++..+
T Consensus 136 AD~VlLi~a~l~~~~l~~l~~~a~~lGl~~lvev~t~ee~~~A~~~Gad~IGv~~r~l~--------------------- 194 (272)
T 3qja_A 136 ADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARDLM--------------------- 194 (272)
T ss_dssp CSEEEEEGGGSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEEESBCTT---------------------
T ss_pred CCEEEEecccCCHHHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHCCCCEEEECCCccc---------------------
Confidence 99996 5666777666665554 457889999999999999999999999999865311
Q ss_pred ccChhHHHHhhhccCCcHHHHHHHhhcC--CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHH
Q 021575 193 NMDDDEVFTFAKKIAAPYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVR 270 (310)
Q Consensus 193 ~~~~d~~~~~~~~~~~~~~~i~~i~~~~--~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~ 270 (310)
+ ...+++.+.++.+.. ++|++ ++|||+|++|+.++.++|+|||+||++||+++||...+++|+.
T Consensus 195 ~------------~~~dl~~~~~l~~~v~~~~pvV--aegGI~t~edv~~l~~~GadgvlVGsal~~a~dp~~~~~~l~~ 260 (272)
T 3qja_A 195 T------------LDVDRDCFARIAPGLPSSVIRI--AESGVRGTADLLAYAGAGADAVLVGEGLVTSGDPRAAVADLVT 260 (272)
T ss_dssp T------------CCBCTTHHHHHGGGSCTTSEEE--EESCCCSHHHHHHHHHTTCSEEEECHHHHTCSCHHHHHHHHHT
T ss_pred c------------cccCHHHHHHHHHhCcccCEEE--EECCCCCHHHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHHh
Confidence 0 122344555665544 68888 7899999999999999999999999999999999999998887
Q ss_pred HHhccC
Q 021575 271 AVTHYS 276 (310)
Q Consensus 271 ~i~~~~ 276 (310)
+..+..
T Consensus 261 ~~~~~~ 266 (272)
T 3qja_A 261 AGTHPS 266 (272)
T ss_dssp TTTCSC
T ss_pred hhcCCc
Confidence 765543
No 8
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=99.88 E-value=3.8e-22 Score=180.06 Aligned_cols=187 Identities=17% Similarity=0.213 Sum_probs=147.2
Q ss_pred CcccccCCCH-HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcC
Q 021575 36 GGVIMDVVTP-EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIG 114 (310)
Q Consensus 36 ~g~i~~~~~~-~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aG 114 (310)
+|+|.. .++ ++|+.|+++||++|..+ ++.+.|.|+ ++.++.+++.+++|+++|+++.+..++..+.++|
T Consensus 59 kg~i~~-~~p~~~A~~~~~~GA~~isvl----t~~~~f~G~-----~~~l~~i~~~v~lPvl~kdfI~d~~qi~~a~~~G 128 (254)
T 1vc4_A 59 EGLIRE-VDPVEAALAYARGGARAVSVL----TEPHRFGGS-----LLDLKRVREAVDLPLLRKDFVVDPFMLEEARAFG 128 (254)
T ss_dssp TCCCCS-CCHHHHHHHHHHTTCSEEEEE----CCCSSSCCC-----HHHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTT
T ss_pred CCcCCC-CCHHHHHHHHHHcCCCEEEEe----cchhhhccC-----HHHHHHHHHhcCCCEEECCcCCCHHHHHHHHHcC
Confidence 577777 676 89999999999998444 344566666 8999999999999999999987666677899999
Q ss_pred CCEEE-eCCCCCchhHHHHHHh-cCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeec
Q 021575 115 IDYVD-ESEVLTPADEENHINK-HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLR 192 (310)
Q Consensus 115 ad~Vi-~~~~~~~~~~~~~i~~-~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~ 192 (310)
||+|+ ++..++ .++.+++.. +.+++.+++++|+.+|+.++.++|+++++++++.++.
T Consensus 129 AD~VlL~~~~l~-~~l~~l~~~a~~lGl~~lvev~~~~E~~~a~~~gad~IGvn~~~l~~-------------------- 187 (254)
T 1vc4_A 129 ASAALLIVALLG-ELTGAYLEEARRLGLEALVEVHTERELEIALEAGAEVLGINNRDLAT-------------------- 187 (254)
T ss_dssp CSEEEEEHHHHG-GGHHHHHHHHHHHTCEEEEEECSHHHHHHHHHHTCSEEEEESBCTTT--------------------
T ss_pred CCEEEECccchH-HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCCEEEEccccCcC--------------------
Confidence 99996 555555 666666653 3467888999999999999999999999998754321
Q ss_pred ccChhHHHHhhhccCCcHHHHHHHhhcC-----CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHH
Q 021575 193 NMDDDEVFTFAKKIAAPYDLVMQTKQLG-----RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQA 267 (310)
Q Consensus 193 ~~~~d~~~~~~~~~~~~~~~i~~i~~~~-----~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~ 267 (310)
+ ..+++.+.++.+.. ++|++ ++|||+|++|+.++.+ |+|||+||++||+++||...+++
T Consensus 188 -~------------~~dl~~~~~L~~~i~~~~~~~~vI--AegGI~s~~dv~~l~~-Ga~gvlVGsAl~~~~d~~~~~~~ 251 (254)
T 1vc4_A 188 -L------------HINLETAPRLGRLARKRGFGGVLV--AESGYSRKEELKALEG-LFDAVLIGTSLMRAPDLEAALRE 251 (254)
T ss_dssp -C------------CBCTTHHHHHHHHHHHTTCCSEEE--EESCCCSHHHHHTTTT-TCSEEEECHHHHTSSCHHHHHHH
T ss_pred -C------------CCCHHHHHHHHHhCccccCCCeEE--EEcCCCCHHHHHHHHc-CCCEEEEeHHHcCCCCHHHHHHH
Confidence 1 12222333333221 57888 7899999999999999 99999999999999999988877
Q ss_pred HH
Q 021575 268 IV 269 (310)
Q Consensus 268 l~ 269 (310)
|+
T Consensus 252 l~ 253 (254)
T 1vc4_A 252 LV 253 (254)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 9
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.88 E-value=3.6e-21 Score=171.08 Aligned_cols=195 Identities=23% Similarity=0.321 Sum_probs=149.3
Q ss_pred ecchhhhh--hCcccccCCCH------------HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcC
Q 021575 27 KVGLAQML--RGGVIMDVVTP------------EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVT 92 (310)
Q Consensus 27 ~~~~~~~~--~~g~i~~~~~~------------~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~ 92 (310)
..++.+.+ ++|+|.+|+.+ ++|++++++||.++. .. +++.++++|+.++
T Consensus 7 ~~~~~~~~~~~~~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~----------~~-------~~~~i~~ir~~v~ 69 (229)
T 3q58_A 7 LARLEQSVHENGGLIVSCQPVPGSPMDKPEIVAAMAQAAASAGAVAVR----------IE-------GIENLRTVRPHLS 69 (229)
T ss_dssp HHHHHHHHHHHCCEEEECCCCTTSTTCSHHHHHHHHHHHHHTTCSEEE----------EE-------SHHHHHHHGGGCC
T ss_pred HHHHHHHhhhcCCEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCcEEE----------EC-------CHHHHHHHHHhcC
Confidence 34666777 88999888743 579999999999972 11 1789999999999
Q ss_pred cceee---cc------ccC-cHHHHHHHHHcCCCEEE-eC-CCCCchhHHHHHHh-cCCCCcEEEecCCHHHHHHHHHhC
Q 021575 93 IPVMA---KA------RIG-HFVEAQILEAIGIDYVD-ES-EVLTPADEENHINK-HNFRIPFVCGCRNLGEALRRIREG 159 (310)
Q Consensus 93 iPv~v---k~------~~~-~~~~a~~~~~aGad~Vi-~~-~~~~~~~~~~~i~~-~~~~i~~~v~~~t~~ea~~~~~~G 159 (310)
+|++. ++ +++ +.++++.+.++|||.|+ .+ ....|..+.++++. +..++.++++++|.++++++.++|
T Consensus 70 ~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~G 149 (229)
T 3q58_A 70 VPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLHGLLAMADCSTVNEGISCHQKG 149 (229)
T ss_dssp SCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTT
T ss_pred CCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHCCCEEEEecCCHHHHHHHHhCC
Confidence 99873 33 222 34678889999999995 33 22334444444433 235899999999999999999999
Q ss_pred CCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHH
Q 021575 160 AAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAA 239 (310)
Q Consensus 160 ad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~ 239 (310)
+|+|.++.+++++. + +...+++++++++++. ++||+ ++|||+|++|+.
T Consensus 150 ad~Ig~~~~g~t~~---------------------~--------~~~~~~~~li~~l~~~-~ipvI--A~GGI~t~~d~~ 197 (229)
T 3q58_A 150 IEFIGTTLSGYTGP---------------------I--------TPVEPDLAMVTQLSHA-GCRVI--AEGRYNTPALAA 197 (229)
T ss_dssp CSEEECTTTTSSSS---------------------C--------CCSSCCHHHHHHHHTT-TCCEE--EESSCCSHHHHH
T ss_pred CCEEEecCccCCCC---------------------C--------cCCCCCHHHHHHHHHc-CCCEE--EECCCCCHHHHH
Confidence 99998755444321 0 0124568889999886 89998 789999999999
Q ss_pred HHHHcCCCEEEEccccccCCCHHHHHHHHHHHHh
Q 021575 240 MMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVT 273 (310)
Q Consensus 240 ~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~ 273 (310)
+++++|||+|+||++|++ |+..+++|.++++
T Consensus 198 ~~~~~GadgV~VGsai~~---p~~~~~~f~~~~~ 228 (229)
T 3q58_A 198 NAIEHGAWAVTVGSAITR---IEHICQWFSHAVK 228 (229)
T ss_dssp HHHHTTCSEEEECHHHHC---HHHHHHHHHHHHC
T ss_pred HHHHcCCCEEEEchHhcC---hHHHHHHHHHHHh
Confidence 999999999999999995 8888999988775
No 10
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=99.87 E-value=5.9e-21 Score=171.30 Aligned_cols=190 Identities=15% Similarity=0.203 Sum_probs=150.9
Q ss_pred CcccccCCCH-HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcC
Q 021575 36 GGVIMDVVTP-EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIG 114 (310)
Q Consensus 36 ~g~i~~~~~~-~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aG 114 (310)
+|.|..-.++ ++|+.|+++ |.+|..| ++.+.|+|+ ++.++.+++.+++||+.|+++.+...+..+..+|
T Consensus 54 kG~i~~~~~~~~iA~~y~~~-A~~IsVl----Td~~~F~gs-----~~dL~~ir~~v~lPvLrKDfi~~~~qi~ea~~~G 123 (251)
T 1i4n_A 54 AGDINADASLEDFIRMYDEL-ADAISIL----TEKHYFKGD-----PAFVRAARNLTCRPILAKDFYIDTVQVKLASSVG 123 (251)
T ss_dssp SCBSCTTCCHHHHHHHHHHH-CSEEEEE----CCCSSSCCC-----THHHHHHHTTCCSCEEEECCCCSTHHHHHHHHTT
T ss_pred CCccCCCCCHHHHHHHHHHh-CCceEEE----ecccccCCC-----HHHHHHHHHhCCCCEEEeeCCCCHHHHHHHHHcC
Confidence 3555555565 789999999 9999777 677888887 8999999999999999999886544555688899
Q ss_pred CCEEE-eCCCCCchhHHHHHHh-cCCCCcEEEecCCHHHHHHHHHh-CCCEEEEcCCCCCcchHHHHHHHHhhccceEee
Q 021575 115 IDYVD-ESEVLTPADEENHINK-HNFRIPFVCGCRNLGEALRRIRE-GAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVL 191 (310)
Q Consensus 115 ad~Vi-~~~~~~~~~~~~~i~~-~~~~i~~~v~~~t~~ea~~~~~~-Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l 191 (310)
||.|+ +...++..++.++++. +..|+.+++++||.+|+.++.++ |+++|+++++....
T Consensus 124 AD~ilLi~a~l~~~~l~~l~~~a~~lGl~~lvEv~~~eE~~~A~~l~g~~iIGinnr~l~t------------------- 184 (251)
T 1i4n_A 124 ADAILIIARILTAEQIKEIYEAAEELGMDSLVEVHSREDLEKVFSVIRPKIIGINTRDLDT------------------- 184 (251)
T ss_dssp CSEEEEEGGGSCHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHTTCCCSEEEEECBCTTT-------------------
T ss_pred CCEEEEecccCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCCEEEEeCccccc-------------------
Confidence 99995 5555676777777665 56899999999999999999999 99999999864321
Q ss_pred cccChhHHHHhhhccCCcHHHHHHHhhcC--CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHH
Q 021575 192 RNMDDDEVFTFAKKIAAPYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIV 269 (310)
Q Consensus 192 ~~~~~d~~~~~~~~~~~~~~~i~~i~~~~--~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~ 269 (310)
+ ..+++...++.+.. +++++ ++|||+|++|+.++.++ +|+|+||++||+++||....++|+
T Consensus 185 --~------------~~d~~~~~~l~~~ip~~~~vI--aEsGI~t~edv~~~~~~-a~avLVG~aimr~~d~~~~~~~l~ 247 (251)
T 1i4n_A 185 --F------------EIKKNVLWELLPLVPDDTVVV--AESGIKDPRELKDLRGK-VNAVLVGTSIMKAENPRRFLEEMR 247 (251)
T ss_dssp --C------------CBCTTHHHHHGGGSCTTSEEE--EESCCCCGGGHHHHTTT-CSEEEECHHHHHCSSHHHHHHHHH
T ss_pred --C------------CCCHHHHHHHHHhCCCCCEEE--EeCCCCCHHHHHHHHHh-CCEEEEcHHHcCCcCHHHHHHHHH
Confidence 1 12233333343332 35666 89999999999999999 999999999999999998888876
Q ss_pred HH
Q 021575 270 RA 271 (310)
Q Consensus 270 ~~ 271 (310)
..
T Consensus 248 ~~ 249 (251)
T 1i4n_A 248 AW 249 (251)
T ss_dssp HH
T ss_pred hC
Confidence 64
No 11
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=99.87 E-value=1.1e-20 Score=168.12 Aligned_cols=174 Identities=16% Similarity=0.193 Sum_probs=138.4
Q ss_pred CH-HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEE-eC
Q 021575 44 TP-EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVD-ES 121 (310)
Q Consensus 44 ~~-~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi-~~ 121 (310)
+| +.|+ +.++||.+|+.| ++.+.|+|+ ++.++++++.+++|++.||++-+..++..+..+|||+|+ +.
T Consensus 65 dp~~iA~-~~~~GA~aiSVL----Td~~~F~Gs-----~~~L~~vr~~v~lPvLrKDFiid~yQI~eAr~~GADaILLI~ 134 (258)
T 4a29_A 65 DPIEYAK-FMERYAVGLSIT----TEEKYFNGS-----YETLRKIASSVSIPILMSDFIVKESQIDDAYNLGADTVLLIV 134 (258)
T ss_dssp CHHHHHH-HHTTTCSEEEEE----CCSTTTCCC-----HHHHHHHHTTCSSCEEEESCCCSHHHHHHHHHHTCSEEEEEG
T ss_pred CHHHHHH-HHhCCCeEEEEe----CCCCCCCCC-----HHHHHHHHHhcCCCEeeccccccHHHHHHHHHcCCCeeehHH
Confidence 56 5565 556899999888 677889988 899999999999999999998754445555669999996 77
Q ss_pred CCCCchhHHHHHHh-cCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHH
Q 021575 122 EVLTPADEENHINK-HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVF 200 (310)
Q Consensus 122 ~~~~~~~~~~~i~~-~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~ 200 (310)
..+++.++.++++. +..++.+++++||.+|..++.++|+++|+++++. +.+++
T Consensus 135 a~L~~~~l~~l~~~A~~lGl~~LvEVh~~~El~rAl~~~a~iIGINNRn---------------------L~tf~----- 188 (258)
T 4a29_A 135 KILTERELESLLEYARSYGMEPLILINDENDLDIALRIGARFIGIMSRD---------------------FETGE----- 188 (258)
T ss_dssp GGSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHTTCSEEEECSBC---------------------TTTCC-----
T ss_pred hhcCHHHHHHHHHHHHHHhHHHHHhcchHHHHHHHhcCCCcEEEEeCCC---------------------ccccc-----
Confidence 77888777777665 5689999999999999999999999999999863 23322
Q ss_pred HhhhccCCcHHHHHHHhhcC--CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHH
Q 021575 201 TFAKKIAAPYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 201 ~~~~~~~~~~~~i~~i~~~~--~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~ 262 (310)
.+.+...++.... ++.++ +++||++++|+.++...|+|+++||++||+++||.
T Consensus 189 -------vdl~~t~~L~~~ip~~~~~V--sESGI~t~~dv~~l~~~G~~a~LVGealmr~~d~~ 243 (258)
T 4a29_A 189 -------INKENQRKLISMIPSNVVKV--AKLGISERNEIEELRKLGVNAFLISSSLMRNPEKI 243 (258)
T ss_dssp -------BCHHHHHHHHTTSCTTSEEE--EEESSCCHHHHHHHHHTTCCEEEECHHHHHCTTHH
T ss_pred -------cCHHHHHHHHhhCCCCCEEE--EcCCCCCHHHHHHHHHCCCCEEEECHHHhCCCcHH
Confidence 2233333343332 34444 89999999999999999999999999999988873
No 12
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.87 E-value=9.8e-21 Score=168.65 Aligned_cols=195 Identities=23% Similarity=0.300 Sum_probs=148.4
Q ss_pred cchhhhh--hCcccccCCCH------------HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCc
Q 021575 28 VGLAQML--RGGVIMDVVTP------------EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTI 93 (310)
Q Consensus 28 ~~~~~~~--~~g~i~~~~~~------------~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~i 93 (310)
..+.+.+ ++|+|.+|+.+ ++|++++++||.++. .. +++.++++++.+++
T Consensus 8 ~~~~~~~~~~~~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~----------~~-------~~~~i~~ir~~v~~ 70 (232)
T 3igs_A 8 EQLDKNIAASGGLIVSCQPVPGSPLDKPEIVAAMALAAEQAGAVAVR----------IE-------GIDNLRMTRSLVSV 70 (232)
T ss_dssp HHHHHHHHHHCCEEEECCCCTTCTTCSHHHHHHHHHHHHHTTCSEEE----------EE-------SHHHHHHHHTTCCS
T ss_pred HHHHHHhhhcCCEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCeEEE----------EC-------CHHHHHHHHHhcCC
Confidence 4455666 78888888643 589999999999872 11 17899999999999
Q ss_pred ceee---cc------ccC-cHHHHHHHHHcCCCEEE-eCC-CCCchhHHHHHHh-cCCCCcEEEecCCHHHHHHHHHhCC
Q 021575 94 PVMA---KA------RIG-HFVEAQILEAIGIDYVD-ESE-VLTPADEENHINK-HNFRIPFVCGCRNLGEALRRIREGA 160 (310)
Q Consensus 94 Pv~v---k~------~~~-~~~~a~~~~~aGad~Vi-~~~-~~~~~~~~~~i~~-~~~~i~~~v~~~t~~ea~~~~~~Ga 160 (310)
|++. ++ .++ +.++++.+.++|||.|+ .+. ...|..+.++++. +..++.++++++|.++++++.++|+
T Consensus 71 Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~Ga 150 (232)
T 3igs_A 71 PIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHHHLLTMADCSSVDDGLACQRLGA 150 (232)
T ss_dssp CEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECCSHHHHHHHHHTTC
T ss_pred CEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHhCCC
Confidence 9873 22 222 34678889999999995 332 2334444444433 2358899999999999999999999
Q ss_pred CEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHH
Q 021575 161 AMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAM 240 (310)
Q Consensus 161 d~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~ 240 (310)
|+|.++.++++.. + +...+++++++++++. ++|++ ++|||+|++|+.+
T Consensus 151 d~Ig~~~~g~t~~---------------------~--------~~~~~~~~~i~~l~~~-~ipvI--A~GGI~t~~d~~~ 198 (232)
T 3igs_A 151 DIIGTTMSGYTTP---------------------D--------TPEEPDLPLVKALHDA-GCRVI--AEGRYNSPALAAE 198 (232)
T ss_dssp SEEECTTTTSSSS---------------------S--------CCSSCCHHHHHHHHHT-TCCEE--EESCCCSHHHHHH
T ss_pred CEEEEcCccCCCC---------------------C--------CCCCCCHHHHHHHHhc-CCcEE--EECCCCCHHHHHH
Confidence 9998754443321 0 0124568888998886 89998 7899999999999
Q ss_pred HHHcCCCEEEEccccccCCCHHHHHHHHHHHHhc
Q 021575 241 MMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTH 274 (310)
Q Consensus 241 ~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~ 274 (310)
++++|||+|+||++|++ |+..+++|++.+++
T Consensus 199 ~~~~GadgV~VGsal~~---p~~~~~~~~~~i~~ 229 (232)
T 3igs_A 199 AIRYGAWAVTVGSAITR---LEHICGWYNDALKK 229 (232)
T ss_dssp HHHTTCSEEEECHHHHC---HHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEehHhcC---HHHHHHHHHHHHHH
Confidence 99999999999999995 89999999888864
No 13
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=99.83 E-value=1.3e-19 Score=174.99 Aligned_cols=218 Identities=18% Similarity=0.211 Sum_probs=163.4
Q ss_pred CcccccCCCH-HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcC
Q 021575 36 GGVIMDVVTP-EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIG 114 (310)
Q Consensus 36 ~g~i~~~~~~-~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aG 114 (310)
+|+|....++ ++|+.|+++ |.+|+.| ++.+.|+|+ ++.++.+++.+++||+.|+++.+...+..+..+|
T Consensus 61 kG~i~~~~~~~~iA~~y~~~-A~~IsvL----Td~~~F~gs-----~~dL~~vr~~v~lPvLrKDFI~d~~Qi~ea~~~G 130 (452)
T 1pii_A 61 KGVIRDDFDPARIAAIYKHY-ASAISVL----TDEKYFQGS-----FNFLPIVSQIAPQPILCKDFIIDPYQIYLARYYQ 130 (452)
T ss_dssp TEESCSSCCHHHHHHHHTTT-CSEEEEE----CCSTTTCCC-----TTHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTT
T ss_pred CCccCCCCCHHHHHHHHHhh-CcEEEEE----ecccccCCC-----HHHHHHHHHhcCCCeEEEeccCCHHHHHHHHHcC
Confidence 4666655566 789999998 9999777 677888887 8999999999999999999987544455578899
Q ss_pred CCEEE-eCCCCCchhHHHHHHh-cCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeec
Q 021575 115 IDYVD-ESEVLTPADEENHINK-HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLR 192 (310)
Q Consensus 115 ad~Vi-~~~~~~~~~~~~~i~~-~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~ 192 (310)
||.|+ +...++..++.++++. +..++.+++++||.+|+.++.++|+++|+++++.. .
T Consensus 131 AD~ILLi~a~l~~~~l~~l~~~a~~lgm~~LvEvh~~eE~~~A~~lga~iIGinnr~L---------------------~ 189 (452)
T 1pii_A 131 ADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTEVSNEEEQERAIALGAKVVGINNRDL---------------------R 189 (452)
T ss_dssp CSEEEEETTTCCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHTTCSEEEEESEET---------------------T
T ss_pred CCEEEEEcccCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHCCCCEEEEeCCCC---------------------C
Confidence 99995 6666776677776655 55799999999999999999999999999998643 2
Q ss_pred ccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHH
Q 021575 193 NMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAV 272 (310)
Q Consensus 193 ~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i 272 (310)
+++. +.....++.+.+.. +++++ ++|||+|++|+.++.++ +++|+||++||+++||....++|+..-
T Consensus 190 t~~~--------dl~~~~~L~~~ip~--~~~vI--aEsGI~t~edv~~~~~~-a~avLVGealmr~~d~~~~~~~l~~~~ 256 (452)
T 1pii_A 190 DLSI--------DLNRTRELAPKLGH--NVTVI--SESGINTYAQVRELSHF-ANGFLIGSALMAHDDLHAAVRRVLLGE 256 (452)
T ss_dssp TTEE--------CTHHHHHHHHHHCT--TSEEE--EESCCCCHHHHHHHTTT-CSEEEECHHHHTCSCHHHHHHHHHHCS
T ss_pred CCCC--------CHHHHHHHHHhCCC--CCeEE--EECCCCCHHHHHHHHHh-CCEEEEcHHHcCCcCHHHHHHHHHHHh
Confidence 2111 11111233333322 45676 89999999999999999 999999999999999999888887543
Q ss_pred hccC--ChhhhhhhhhhcccchhcccC
Q 021575 273 THYS--DPEVLAEVSCGLGEAMVGLNL 297 (310)
Q Consensus 273 ~~~~--~~~~~~~~~~~~~~~~~~~~~ 297 (310)
.+.+ ....-....-..|-.+.|+-.
T Consensus 257 ~KICGit~~eda~~a~~~Gad~iGfIf 283 (452)
T 1pii_A 257 NKVCGLTRGQDAKAAYDAGAIYGGLIF 283 (452)
T ss_dssp CEECCCCSHHHHHHHHHHTCSEEEEEC
T ss_pred ccccCCCcHHHHHHHHhcCCCEEEeec
Confidence 3322 222223444566777777763
No 14
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.75 E-value=4.9e-17 Score=143.22 Aligned_cols=192 Identities=21% Similarity=0.253 Sum_probs=140.5
Q ss_pred hhCcccccCCCH------------HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceee---c
Q 021575 34 LRGGVIMDVVTP------------EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMA---K 98 (310)
Q Consensus 34 ~~~g~i~~~~~~------------~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~v---k 98 (310)
|++|+|++||-+ ++|++++++|++++ .+ . .++.++++++.+++|++. +
T Consensus 3 ~~~~~~~~~q~~~~~p~~~~~~~~~~a~~~~~~Ga~~i-~~-------~---------~~~~i~~i~~~~~~pv~~~~~~ 65 (223)
T 1y0e_A 3 LPHGLIVSCQALPDEPLHSSFIMSKMALAAYEGGAVGI-RA-------N---------TKEDILAIKETVDLPVIGIVKR 65 (223)
T ss_dssp SCSEEEEECCCCTTSTTCCHHHHHHHHHHHHHHTCSEE-EE-------E---------SHHHHHHHHHHCCSCEEEECBC
T ss_pred cCCCeEEEecCCCCCCCCCCccHHHHHHHHHHCCCeee-cc-------C---------CHHHHHHHHHhcCCCEEeeecc
Confidence 567777777521 67999999999987 32 1 168899999999999952 1
Q ss_pred c------cc-CcHHHHHHHHHcCCCEEE-eCCCC-----CchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEE
Q 021575 99 A------RI-GHFVEAQILEAIGIDYVD-ESEVL-----TPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRT 165 (310)
Q Consensus 99 ~------~~-~~~~~a~~~~~aGad~Vi-~~~~~-----~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v 165 (310)
+ .+ .+.+.++.+.++|+|.|. .+... ...++.+.+++..++++++++++|.+++.++.+.|+|+|.+
T Consensus 66 ~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t~~e~~~~~~~G~d~i~~ 145 (223)
T 1y0e_A 66 DYDHSDVFITATSKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIATVEEAKNAARLGFDYIGT 145 (223)
T ss_dssp CCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTCSEEEC
T ss_pred CCCccccccCCcHHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCCCHHHHHHHHHcCCCEEEe
Confidence 1 11 134678889999999995 43332 23466667766435788899999999999999999999987
Q ss_pred cCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC
Q 021575 166 KGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG 245 (310)
Q Consensus 166 ~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G 245 (310)
...++++. +.+. ....+.++.++++++..++||+ ++|||++++|+.+++++|
T Consensus 146 ~~~g~t~~---------------------~~~~-----~~~~~~~~~~~~~~~~~~ipvi--a~GGI~~~~~~~~~~~~G 197 (223)
T 1y0e_A 146 TLHGYTSY---------------------TQGQ-----LLYQNDFQFLKDVLQSVDAKVI--AEGNVITPDMYKRVMDLG 197 (223)
T ss_dssp TTTTSSTT---------------------STTC-----CTTHHHHHHHHHHHHHCCSEEE--EESSCCSHHHHHHHHHTT
T ss_pred CCCcCcCC---------------------CCCC-----CCCcccHHHHHHHHhhCCCCEE--EecCCCCHHHHHHHHHcC
Confidence 65443321 0000 0012236678888877789998 789999999999999999
Q ss_pred CCEEEEccccccCCCHHHHHHHHHHHHh
Q 021575 246 CDGVFVGSGVFKSGDPVKRAQAIVRAVT 273 (310)
Q Consensus 246 adgV~VGsai~~a~dp~~~a~~l~~~i~ 273 (310)
||+|++||+|++ |...++.|++.++
T Consensus 198 ad~v~vG~al~~---p~~~~~~~~~~~~ 222 (223)
T 1y0e_A 198 VHCSVVGGAITR---PKEITKRFVQVME 222 (223)
T ss_dssp CSEEEECHHHHC---HHHHHHHHHHTTC
T ss_pred CCEEEEChHHcC---cHHHHHHHHHHhc
Confidence 999999999996 8888888876553
No 15
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=99.75 E-value=2e-17 Score=148.12 Aligned_cols=181 Identities=16% Similarity=0.157 Sum_probs=132.2
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCC-------C----CCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGV-------A----RMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIG 114 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~-------~----~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aG 114 (310)
+.++.+.++|+++| +|. .+..+ . +......++++++.+++|++++++ .+.+.+.|
T Consensus 47 ~~~~~al~~Gv~~v-qlR-------~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~liInd~------~~lA~~~g 112 (243)
T 3o63_A 47 QFAEAALAGGVDII-QLR-------DKGSPGELRFGPLQARDELAACEILADAAHRYGALFAVNDR------ADIARAAG 112 (243)
T ss_dssp HHHHHHHHTTCSEE-EEC-------CTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCEEEEESC------HHHHHHHT
T ss_pred HHHHHHHHCCCCEE-EEc-------cCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCEEEEeCH------HHHHHHhC
Confidence 67778889999976 873 22200 0 011123455556678999998875 34577899
Q ss_pred CCEEE-eCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecc
Q 021575 115 IDYVD-ESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRN 193 (310)
Q Consensus 115 ad~Vi-~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~ 193 (310)
||+|. ...+++..++.+. .+.+..++++++|.+|+.++.+.|+|||.+++...|.
T Consensus 113 AdGVHLg~~dl~~~~~r~~---~~~~~~iG~S~ht~~Ea~~A~~~GaDyI~vgpvf~T~--------------------- 168 (243)
T 3o63_A 113 ADVLHLGQRDLPVNVARQI---LAPDTLIGRSTHDPDQVAAAAAGDADYFCVGPCWPTP--------------------- 168 (243)
T ss_dssp CSEEEECTTSSCHHHHHHH---SCTTCEEEEEECSHHHHHHHHHSSCSEEEECCSSCCC---------------------
T ss_pred CCEEEecCCcCCHHHHHHh---hCCCCEEEEeCCCHHHHHHHhhCCCCEEEEcCccCCC---------------------
Confidence 99995 6666766666544 3567889999999999999999999999986522221
Q ss_pred cChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHH
Q 021575 194 MDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRA 271 (310)
Q Consensus 194 ~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~ 271 (310)
++.. .....++.++++++. .++|++ |.||| +++++.+++++||+||+|||+|++++||...+++|.+.
T Consensus 169 -tK~~------~~~~gl~~l~~~~~~~~~~iPvv--AiGGI-~~~ni~~~~~aGa~gvav~sai~~a~dp~~a~~~l~~~ 238 (243)
T 3o63_A 169 -TKPG------RAAPGLGLVRVAAELGGDDKPWF--AIGGI-NAQRLPAVLDAGARRIVVVRAITSADDPRAAAEQLRSA 238 (243)
T ss_dssp -C-----------CCCHHHHHHHHTC---CCCEE--EESSC-CTTTHHHHHHTTCCCEEESHHHHTCSSHHHHHHHHHHH
T ss_pred -CCCC------cchhhHHHHHHHHHhccCCCCEE--EecCC-CHHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHH
Confidence 1100 012347778888775 489999 55999 89999999999999999999999999999999999887
Q ss_pred Hhc
Q 021575 272 VTH 274 (310)
Q Consensus 272 i~~ 274 (310)
+++
T Consensus 239 ~~~ 241 (243)
T 3o63_A 239 LTA 241 (243)
T ss_dssp HHT
T ss_pred HHh
Confidence 764
No 16
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=99.74 E-value=7.2e-17 Score=145.89 Aligned_cols=194 Identities=16% Similarity=0.170 Sum_probs=132.8
Q ss_pred hhhhhhCcccccCCCH-HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHH
Q 021575 30 LAQMLRGGVIMDVVTP-EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQ 108 (310)
Q Consensus 30 ~~~~~~~g~i~~~~~~-~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~ 108 (310)
.++++++|....-.++ +.++.++++|+++|...++ ... +.....+.+.++++++.+++|++++..+...++++
T Consensus 17 ~~v~~~~g~~~~~~~~~~~a~~~~~~Ga~~i~v~d~-----~~~-~~~~g~~~~~i~~i~~~~~iPvi~~ggi~~~~~i~ 90 (266)
T 2w6r_A 17 FMVFTHSGKKNTGILLRDWVVEVEKRGAGEILLTSI-----DRD-GTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFL 90 (266)
T ss_dssp EEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEET-----TTS-SCSSCCCHHHHHHHGGGCCSCEEEESCCCSTHHHH
T ss_pred EEEEEcCCeeccCCCHHHHHHHHHHCCCCEEEEEec-----Ccc-cCCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHH
Confidence 4566677765444444 7899999999999822221 110 11123458999999999999999998877777888
Q ss_pred HHHHcCCCEEE-eCCCC----CchhHHHHHHhcC--CC-CcEEEecC-------------------CH-HHHHHHHHhCC
Q 021575 109 ILEAIGIDYVD-ESEVL----TPADEENHINKHN--FR-IPFVCGCR-------------------NL-GEALRRIREGA 160 (310)
Q Consensus 109 ~~~~aGad~Vi-~~~~~----~~~~~~~~i~~~~--~~-i~~~v~~~-------------------t~-~ea~~~~~~Ga 160 (310)
.+.++|||+|+ .+..+ ++..+.+.++..+ .+ +.+.++++ +. +.+.++.+.|+
T Consensus 91 ~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~ 170 (266)
T 2w6r_A 91 EAFLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEKRGA 170 (266)
T ss_dssp HHHHHTCSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTC
T ss_pred HHHHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHHcCC
Confidence 88999999997 55555 4556666554444 22 44556652 33 44577778899
Q ss_pred CEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHH
Q 021575 161 AMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAM 240 (310)
Q Consensus 161 d~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~ 240 (310)
+.|.+++....+. ..+.++++++++++..++|++ ++|||++++|+.+
T Consensus 171 ~~i~~t~~~~~g~-------------------------------~~g~~~~~i~~l~~~~~ipvi--a~GGI~~~ed~~~ 217 (266)
T 2w6r_A 171 GEILLTSIDRDGT-------------------------------KSGYDTEMIRFVRPLTTLPII--ASGGAGKMEHFLE 217 (266)
T ss_dssp SEEEEEETTTTTT-------------------------------CSCCCHHHHHHHGGGCCSCEE--EESCCCSHHHHHH
T ss_pred CEEEEEeecCCCC-------------------------------cCCCCHHHHHHHHHHcCCCEE--EeCCCCCHHHHHH
Confidence 9888764321110 124468899999988899998 7899999999999
Q ss_pred HHHcCCCEEEEccccccCCCHH
Q 021575 241 MMQLGCDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 241 ~l~~GadgV~VGsai~~a~dp~ 262 (310)
++++|||||+|||+|++.+++.
T Consensus 218 ~~~~Gadgv~vgsal~~~~~~~ 239 (266)
T 2w6r_A 218 AFLAGADAALAASVFHFREIDM 239 (266)
T ss_dssp HHHHTCSEEEESTTTC------
T ss_pred HHHcCCHHHHccHHHHcCCCCH
Confidence 9999999999999999866443
No 17
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=99.71 E-value=1.3e-16 Score=142.89 Aligned_cols=199 Identities=20% Similarity=0.204 Sum_probs=136.1
Q ss_pred eecchhhhhhCc-ccccCCCH-HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCc
Q 021575 26 VKVGLAQMLRGG-VIMDVVTP-EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGH 103 (310)
Q Consensus 26 ~~~~~~~~~~~g-~i~~~~~~-~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~ 103 (310)
++.|.++++.++ .+.+..++ +.++.++++|++++...++. . .+.....+.+.++++++.+++|+++..++..
T Consensus 13 ~~~g~~v~~~~~~~~~~~~d~~~~a~~~~~~Gad~i~v~d~~-----~-~~~~~~~~~~~i~~i~~~~~iPvi~~Ggi~~ 86 (252)
T 1ka9_F 13 VHAGRVVKGVNFVNLRDAGDPVEAARAYDEAGADELVFLDIS-----A-THEERAILLDVVARVAERVFIPLTVGGGVRS 86 (252)
T ss_dssp EETTEETTCCCSSCCSSTTCHHHHHHHHHHHTCSCEEEEECC-----S-STTCHHHHHHHHHHHHTTCCSCEEEESSCCS
T ss_pred EECCEEEEeecccCceecCCHHHHHHHHHHcCCCEEEEEcCC-----c-cccCccccHHHHHHHHHhCCCCEEEECCcCC
Confidence 344555544332 12223344 78999999999987322211 0 0111112356788999999999999998887
Q ss_pred HHHHHHHHHcCCCEEE-eCCCCC-chhHHHHHHhcCCC-CcEEEecC--------------------CHHHHHHHHHhCC
Q 021575 104 FVEAQILEAIGIDYVD-ESEVLT-PADEENHINKHNFR-IPFVCGCR--------------------NLGEALRRIREGA 160 (310)
Q Consensus 104 ~~~a~~~~~aGad~Vi-~~~~~~-~~~~~~~i~~~~~~-i~~~v~~~--------------------t~~ea~~~~~~Ga 160 (310)
.++++.+.++|||+|+ .+..++ +..+.+..+..+.+ +.+.++++ +.+.++++.+.|+
T Consensus 87 ~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~ 166 (252)
T 1ka9_F 87 LEDARKLLLSGADKVSVNSAAVRRPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVELGA 166 (252)
T ss_dssp HHHHHHHHHHTCSEEEECHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCEEEEChHHHhCcHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHcCC
Confidence 8899999999999996 333333 33344444444333 45666653 2566777888899
Q ss_pred CEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHH
Q 021575 161 AMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAM 240 (310)
Q Consensus 161 d~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~ 240 (310)
+.+.+++....+. ..+.++++++++++..++|++ ++|||++++|+.+
T Consensus 167 ~~i~~~~~~~~g~-------------------------------~~g~~~~~i~~l~~~~~ipvi--a~GGI~~~~d~~~ 213 (252)
T 1ka9_F 167 GEILLTSMDRDGT-------------------------------KEGYDLRLTRMVAEAVGVPVI--ASGGAGRMEHFLE 213 (252)
T ss_dssp CEEEEEETTTTTT-------------------------------CSCCCHHHHHHHHHHCSSCEE--EESCCCSHHHHHH
T ss_pred CEEEEecccCCCC-------------------------------cCCCCHHHHHHHHHHcCCCEE--EeCCCCCHHHHHH
Confidence 9877764321110 123468899999888899998 7899999999999
Q ss_pred HHHcCCCEEEEccccccCC-CHHH
Q 021575 241 MMQLGCDGVFVGSGVFKSG-DPVK 263 (310)
Q Consensus 241 ~l~~GadgV~VGsai~~a~-dp~~ 263 (310)
++++|||||++||+|++++ ++..
T Consensus 214 ~~~~Gadgv~vgsal~~~~~~~~~ 237 (252)
T 1ka9_F 214 AFQAGAEAALAASVFHFGEIPIPK 237 (252)
T ss_dssp HHHTTCSEEEESHHHHTTSSCHHH
T ss_pred HHHCCCHHHHHHHHHHcCCCCHHH
Confidence 9999999999999999987 4443
No 18
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=99.71 E-value=2.1e-17 Score=147.55 Aligned_cols=200 Identities=16% Similarity=0.150 Sum_probs=142.0
Q ss_pred eecchhhhhhCcccccC----CCH-HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccc
Q 021575 26 VKVGLAQMLRGGVIMDV----VTP-EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKAR 100 (310)
Q Consensus 26 ~~~~~~~~~~~g~i~~~----~~~-~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~ 100 (310)
++.|.++++++|+..+. .++ +.++.++++|+++|...++. ..+.+ ...+.+.+++++ .+++|++++..
T Consensus 9 ~~~g~~vk~~~G~~~~~~~~~~~~~~~a~~~~~~Gad~i~v~d~~----~~~~~--~~~~~~~i~~i~-~~~ipvi~~Gg 81 (241)
T 1qo2_A 9 LFRGKVARMIKGRKENTIFYEKDPVELVEKLIEEGFTLIHVVDLS----NAIEN--SGENLPVLEKLS-EFAEHIQIGGG 81 (241)
T ss_dssp EETTEEEEEGGGCGGGEEEESSCHHHHHHHHHHTTCCCEEEEEHH----HHHHC--CCTTHHHHHHGG-GGGGGEEEESS
T ss_pred eeCCEEEEEeccccccceecCcCHHHHHHHHHHcCCCEEEEeccc----ccccC--CchhHHHHHHHH-hcCCcEEEECC
Confidence 45677777777766554 355 78999999999988222211 00111 134578899998 88999999988
Q ss_pred cCcHHHHHHHHHcCCCEEE-eCCCCCchh-HHHHHHhcCCCCcEEEecC---------------CHHH-HHHHHHhCCCE
Q 021575 101 IGHFVEAQILEAIGIDYVD-ESEVLTPAD-EENHINKHNFRIPFVCGCR---------------NLGE-ALRRIREGAAM 162 (310)
Q Consensus 101 ~~~~~~a~~~~~aGad~Vi-~~~~~~~~~-~~~~i~~~~~~i~~~v~~~---------------t~~e-a~~~~~~Gad~ 162 (310)
+...++++.+.++|||+|+ .+..++.++ +.+. +..+..+.+.++++ +..+ ++++.+.|++.
T Consensus 82 i~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~-~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~ 160 (241)
T 1qo2_A 82 IRSLDYAEKLRKLGYRRQIVSSKVLEDPSFLKSL-REIDVEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEYGLEE 160 (241)
T ss_dssp CCSHHHHHHHHHTTCCEEEECHHHHHCTTHHHHH-HTTTCEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTTTCCE
T ss_pred CCCHHHHHHHHHCCCCEEEECchHhhChHHHHHH-HHcCCcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhCCCCE
Confidence 8878889999999999996 333333334 4444 44442355667773 5545 56677888888
Q ss_pred EEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHH
Q 021575 163 IRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMM 242 (310)
Q Consensus 163 V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l 242 (310)
|.+++.. +++. ..++++++++++++..++||+ ++|||++++|+.+++
T Consensus 161 i~~t~~~--------------------------~~g~-----~~g~~~~~i~~l~~~~~iPvi--a~GGI~~~~d~~~~~ 207 (241)
T 1qo2_A 161 IVHTEIE--------------------------KDGT-----LQEHDFSLTKKIAIEAEVKVL--AAGGISSENSLKTAQ 207 (241)
T ss_dssp EEEEETT--------------------------HHHH-----TCCCCHHHHHHHHHHHTCEEE--EESSCCSHHHHHHHH
T ss_pred EEEEeec--------------------------cccc-----CCcCCHHHHHHHHHhcCCcEE--EECCCCCHHHHHHHH
Confidence 8776532 1111 124568899999887899998 789999999999999
Q ss_pred Hc-----C-CCEEEEccccccCCCHHHHHH
Q 021575 243 QL-----G-CDGVFVGSGVFKSGDPVKRAQ 266 (310)
Q Consensus 243 ~~-----G-adgV~VGsai~~a~dp~~~a~ 266 (310)
+. | ||||+|||+|++.+.+...++
T Consensus 208 ~~~~~~~G~adgv~vgsal~~~~~~~~~~~ 237 (241)
T 1qo2_A 208 KVHTETNGLLKGVIVGRAFLEGILTVEVMK 237 (241)
T ss_dssp HHHHHTTTSEEEEEECHHHHTTSSCHHHHH
T ss_pred hcccccCCeEeEEEeeHHHHcCCCCHHHHH
Confidence 88 9 999999999999776654443
No 19
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.71 E-value=2.7e-16 Score=140.95 Aligned_cols=202 Identities=18% Similarity=0.193 Sum_probs=136.8
Q ss_pred eecchhhhhhCc-ccccCCCH-HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCc
Q 021575 26 VKVGLAQMLRGG-VIMDVVTP-EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGH 103 (310)
Q Consensus 26 ~~~~~~~~~~~g-~i~~~~~~-~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~ 103 (310)
++.|.++++.++ ......++ +.++.++++|++++...+.. ..+. ....+.+.++++++.+++|++++..+..
T Consensus 12 ~~~g~~v~~~~~~~~~~~~d~~~~a~~~~~~Gad~i~v~d~~----~~~~--~~~~~~~~i~~i~~~~~ipvi~~ggI~~ 85 (253)
T 1thf_D 12 VKDGRVVKGSNFENLRDSGDPVELGKFYSEIGIDELVFLDIT----ASVE--KRKTMLELVEKVAEQIDIPFTVGGGIHD 85 (253)
T ss_dssp EETTEECCCSCCTTSSCTTCHHHHHHHHHHTTCCEEEEEESS----CSSS--HHHHHHHHHHHHHTTCCSCEEEESSCCS
T ss_pred EECCEEEEeecccceeeccCHHHHHHHHHHcCCCEEEEECCc----hhhc--CCcccHHHHHHHHHhCCCCEEEeCCCCC
Confidence 344555544432 11222354 78999999999998222211 0010 0112367888899889999999988877
Q ss_pred HHHHHHHHHcCCCEEE-eCCCC-CchhHHHHHHhcCCC-CcEEEecC-------------------C-HHHHHHHHHhCC
Q 021575 104 FVEAQILEAIGIDYVD-ESEVL-TPADEENHINKHNFR-IPFVCGCR-------------------N-LGEALRRIREGA 160 (310)
Q Consensus 104 ~~~a~~~~~aGad~Vi-~~~~~-~~~~~~~~i~~~~~~-i~~~v~~~-------------------t-~~ea~~~~~~Ga 160 (310)
.++++.+.++|||.|+ .+..+ .+..+.+.++..+.+ +.+.++++ + .+.+.++.+.|+
T Consensus 86 ~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~ 165 (253)
T 1thf_D 86 FETASELILRGADKVSINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGA 165 (253)
T ss_dssp HHHHHHHHHTTCSEEEESHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEEChHHHhChHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHHCCC
Confidence 7889999999999996 33333 344455555444432 44566664 2 355677778899
Q ss_pred CEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHH
Q 021575 161 AMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAM 240 (310)
Q Consensus 161 d~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~ 240 (310)
+.+.++.....+. ..+.+++.++++++..++||+ ++|||++++|+.+
T Consensus 166 ~~i~~~~~~~~g~-------------------------------~~g~~~~~~~~l~~~~~ipvi--a~GGI~~~~d~~~ 212 (253)
T 1thf_D 166 GEILLTSIDRDGT-------------------------------KSGYDTEMIRFVRPLTTLPII--ASGGAGKMEHFLE 212 (253)
T ss_dssp SEEEEEETTTTTS-------------------------------CSCCCHHHHHHHGGGCCSCEE--EESCCCSHHHHHH
T ss_pred CEEEEEeccCCCC-------------------------------CCCCCHHHHHHHHHhcCCCEE--EECCCCCHHHHHH
Confidence 8877664321110 123468889999887899998 7899999999999
Q ss_pred HHHcCCCEEEEccccccCC-CHHHHHH
Q 021575 241 MMQLGCDGVFVGSGVFKSG-DPVKRAQ 266 (310)
Q Consensus 241 ~l~~GadgV~VGsai~~a~-dp~~~a~ 266 (310)
++++|||+|++||+|++++ +|....+
T Consensus 213 ~~~~Gadgv~vGsal~~~~~~~~~~~~ 239 (253)
T 1thf_D 213 AFLAGADAALAASVFHFREIDVRELKE 239 (253)
T ss_dssp HHHTTCSEEEESHHHHTTCSCHHHHHH
T ss_pred HHHcCChHHHHHHHHHcCCCCHHHHHH
Confidence 9999999999999999977 6554444
No 20
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.70 E-value=1.1e-16 Score=142.83 Aligned_cols=199 Identities=25% Similarity=0.237 Sum_probs=134.7
Q ss_pred ceeecchhhhhhCcccccCC---CH-HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeecc
Q 021575 24 FSVKVGLAQMLRGGVIMDVV---TP-EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKA 99 (310)
Q Consensus 24 ~~~~~~~~~~~~~g~i~~~~---~~-~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~ 99 (310)
+-++.|.++++.+|...+.+ ++ +.++.++++|++++ ++.. ....+.+. ..+ +.++++++.+++|++++.
T Consensus 10 idl~~g~~V~~~~g~~~~~~~~~d~~~~a~~~~~~Gad~i-~v~~---~d~~~~~~--~~~-~~i~~i~~~~~ipv~v~g 82 (244)
T 1vzw_A 10 VDVRDGQAVRLVHGESGTETSYGSPLEAALAWQRSGAEWL-HLVD---LDAAFGTG--DNR-ALIAEVAQAMDIKVELSG 82 (244)
T ss_dssp EEEETTEEBC--------CCBCCCHHHHHHHHHHTTCSEE-EEEE---HHHHHTSC--CCH-HHHHHHHHHCSSEEEEES
T ss_pred EEEECCEEEEeeccccccceecCCHHHHHHHHHHcCCCEE-EEec---CchhhcCC--ChH-HHHHHHHHhcCCcEEEEC
Confidence 34667888888877655443 55 78999999999998 4310 00111111 233 789999999999999998
Q ss_pred ccCcHHHHHHHHHcCCCEEE-eCCCCC-chhHHHHHHhcCCCCcEEEecC--------------CH-HHHHHHHHhCCCE
Q 021575 100 RIGHFVEAQILEAIGIDYVD-ESEVLT-PADEENHINKHNFRIPFVCGCR--------------NL-GEALRRIREGAAM 162 (310)
Q Consensus 100 ~~~~~~~a~~~~~aGad~Vi-~~~~~~-~~~~~~~i~~~~~~i~~~v~~~--------------t~-~ea~~~~~~Gad~ 162 (310)
.+...++++.+.++|||.|. .+..+. +..+.+.++..+..+.+.++++ +. +.+.++.+.|++.
T Consensus 83 gI~~~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~~~ 162 (244)
T 1vzw_A 83 GIRDDDTLAAALATGCTRVNLGTAALETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCAR 162 (244)
T ss_dssp SCCSHHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCCC
T ss_pred CcCCHHHHHHHHHcCCCEEEECchHhhCHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCCCE
Confidence 88777789999999999996 443333 4445555554443355566664 44 4457778889998
Q ss_pred EEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHH
Q 021575 163 IRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMM 242 (310)
Q Consensus 163 V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l 242 (310)
|.+++....+ . ..+.+++.++++++..++||+ ++|||++++|+.+++
T Consensus 163 i~~~~~~~~~--------------------------~-----~~g~~~~~~~~i~~~~~ipvi--a~GGI~~~~d~~~~~ 209 (244)
T 1vzw_A 163 YVVTDIAKDG--------------------------T-----LQGPNLELLKNVCAATDRPVV--ASGGVSSLDDLRAIA 209 (244)
T ss_dssp EEEEEC--------------------------------------CCCHHHHHHHHHTCSSCEE--EESCCCSHHHHHHHH
T ss_pred EEEeccCccc--------------------------c-----cCCCCHHHHHHHHHhcCCCEE--EECCCCCHHHHHHHH
Confidence 8776532111 0 123468889999888899998 789999999999999
Q ss_pred Hc---CCCEEEEccccccCCCHH
Q 021575 243 QL---GCDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 243 ~~---GadgV~VGsai~~a~dp~ 262 (310)
++ |||+|++||+|++.+.+.
T Consensus 210 ~~~~~Gadgv~vG~al~~~~~~~ 232 (244)
T 1vzw_A 210 GLVPAGVEGAIVGKALYAKAFTL 232 (244)
T ss_dssp TTGGGTEEEEEECHHHHTTSSCH
T ss_pred hhccCCCceeeeeHHHHcCCCCH
Confidence 98 999999999999866443
No 21
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.68 E-value=1.1e-16 Score=142.90 Aligned_cols=197 Identities=20% Similarity=0.186 Sum_probs=139.0
Q ss_pred eeecchhhhhhCcccccCC---CH-HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccc
Q 021575 25 SVKVGLAQMLRGGVIMDVV---TP-EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKAR 100 (310)
Q Consensus 25 ~~~~~~~~~~~~g~i~~~~---~~-~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~ 100 (310)
-++.|.++++.+|.+.+.+ ++ +.++.++++|+++| ++.. ....+.+. ... +.++++++.+++|++++..
T Consensus 10 d~~~g~~V~~~~g~~~~~~~~~d~~~~a~~~~~~Gad~i-~v~~---~d~~~~~~--~~~-~~i~~i~~~~~ipv~v~gg 82 (244)
T 2y88_A 10 NVVEGRAVRLVQGKAGSQTEYGSAVDAALGWQRDGAEWI-HLVD---LDAAFGRG--SNH-ELLAEVVGKLDVQVELSGG 82 (244)
T ss_dssp EEETTEEEEEETTEEEEEEEEEEHHHHHHHHHHTTCSEE-EEEE---HHHHTTSC--CCH-HHHHHHHHHCSSEEEEESS
T ss_pred EeECCEEEEeeccccccceecCCHHHHHHHHHHcCCCEE-EEEc---CcccccCC--ChH-HHHHHHHHhcCCcEEEECC
Confidence 4566777777776544332 44 78999999999998 3310 00112111 223 8899999999999999988
Q ss_pred cCcHHHHHHHHHcCCCEEE-eCCCCC-chhHHHHHHhcCCCCcEEEecC------------------C-HHHHHHHHHhC
Q 021575 101 IGHFVEAQILEAIGIDYVD-ESEVLT-PADEENHINKHNFRIPFVCGCR------------------N-LGEALRRIREG 159 (310)
Q Consensus 101 ~~~~~~a~~~~~aGad~Vi-~~~~~~-~~~~~~~i~~~~~~i~~~v~~~------------------t-~~ea~~~~~~G 159 (310)
+...++++.+.++|||.|+ .+..+. +..+.+.++..+..+.+.++++ + .+.+.++.+.|
T Consensus 83 i~~~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~G 162 (244)
T 2y88_A 83 IRDDESLAAALATGCARVNVGTAALENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSEG 162 (244)
T ss_dssp CCSHHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHcCCCEEEECchHhhChHHHHHHHHHcCCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhCC
Confidence 8777789999999999996 443333 3344555544443344455554 2 56677788899
Q ss_pred CCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHH
Q 021575 160 AAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAA 239 (310)
Q Consensus 160 ad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~ 239 (310)
++.|.+++....+. ..+.+++.++++++..++||+ ++|||++++|+.
T Consensus 163 ~~~i~~~~~~~~~~-------------------------------~~g~~~~~~~~l~~~~~ipvi--a~GGI~~~~d~~ 209 (244)
T 2y88_A 163 CSRFVVTDITKDGT-------------------------------LGGPNLDLLAGVADRTDAPVI--ASGGVSSLDDLR 209 (244)
T ss_dssp CCCEEEEETTTTTT-------------------------------TSCCCHHHHHHHHTTCSSCEE--EESCCCSHHHHH
T ss_pred CCEEEEEecCCccc-------------------------------cCCCCHHHHHHHHHhCCCCEE--EECCCCCHHHHH
Confidence 99888876432110 123468888889887899998 789999999999
Q ss_pred HHHHc---CCCEEEEccccccCCCH
Q 021575 240 MMMQL---GCDGVFVGSGVFKSGDP 261 (310)
Q Consensus 240 ~~l~~---GadgV~VGsai~~a~dp 261 (310)
+++++ |||+|++||+++..++.
T Consensus 210 ~~~~~~~~Gad~v~vG~al~~~~~~ 234 (244)
T 2y88_A 210 AIATLTHRGVEGAIVGKALYARRFT 234 (244)
T ss_dssp HHHTTGGGTEEEEEECHHHHTTSSC
T ss_pred HHHhhccCCCCEEEEcHHHHCCCcC
Confidence 99988 99999999999986544
No 22
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=99.68 E-value=1.1e-15 Score=136.96 Aligned_cols=208 Identities=16% Similarity=0.164 Sum_probs=142.6
Q ss_pred eeecchhhhhhCccccc----CCCH-HHHHHHHHcCCcEE--EeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceee
Q 021575 25 SVKVGLAQMLRGGVIMD----VVTP-EQARVAEEAGACAV--MALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMA 97 (310)
Q Consensus 25 ~~~~~~~~~~~~g~i~~----~~~~-~~A~~~~~~Ga~~i--~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~v 97 (310)
-++.|.++++.+|.... ..+| ++|+.|.+.||+++ ++|+.. ..| ...+.+.++++.+.+.+|+.+
T Consensus 9 Dl~~G~vVrlv~G~~~~~~~~~~dP~~~a~~~~~~gad~lhvvDld~a------~~~--~~~~~~~i~~i~~~~~~pl~v 80 (243)
T 4gj1_A 9 DLIDGEVVRLVKGDYEQKKVYKYNPLKKFKEYEKAGAKELHLVDLTGA------KDP--SKRQFALIEKLAKEVSVNLQV 80 (243)
T ss_dssp EEETTEEEEEECSSSCEEEECCCCHHHHHHHHHHHTCCEEEEEEHHHH------HCG--GGCCHHHHHHHHHHCCSEEEE
T ss_pred EEECCeEEEEEccCcCCCcEeCCCHHHHHHHHHHCCCCEEEEEecCcc------ccc--chhHHHHHHHHHHhcCCCeEe
Confidence 35678888888886443 4577 78999999999998 566422 111 134578999999999999999
Q ss_pred ccccCcHHHHHHHHHcCCCEEE-eCCCCCchhHH-HHHHhcCCC-CcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcch
Q 021575 98 KARIGHFVEAQILEAIGIDYVD-ESEVLTPADEE-NHINKHNFR-IPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNI 174 (310)
Q Consensus 98 k~~~~~~~~a~~~~~aGad~Vi-~~~~~~~~~~~-~~i~~~~~~-i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~ 174 (310)
...+...++++.+.++|||.|+ .+..+..+++. +..+.++.. +.+.+++... +-.++.+++|.....
T Consensus 81 GGGIrs~e~~~~~l~~GadkVii~t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~---------~~~~v~~~gw~~~~~- 150 (243)
T 4gj1_A 81 GGGIRSKEEVKALLDCGVKRVVIGSMAIKDATLCLEILKEFGSEAIVLALDTILK---------EDYVVAVNAWQEASD- 150 (243)
T ss_dssp ESSCCCHHHHHHHHHTTCSEEEECTTTTTCHHHHHHHHHHHCTTTEEEEEEEEES---------SSEEEC--------C-
T ss_pred ccccccHHHHHHHHHcCCCEEEEccccccCCchHHHHHhcccCceEEEEEEEEeC---------CCCEEEecCceeccc-
Confidence 9888888999999999999996 77777766664 444445544 4455554210 113567777743211
Q ss_pred HHHHHHHHhhccc---eEeecccChhHHHHhhhccCCcHHHHHHHhhcC-CCCEEEeCCCCCCCHHHHHHHHHcCCCEEE
Q 021575 175 IEAVRHVRSVMGD---IRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVF 250 (310)
Q Consensus 175 ~~~~~~~r~~~~~---~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~-~iPVi~iA~GGI~t~~d~~~~l~~GadgV~ 250 (310)
.+..+++++.... .-+++.+++|+++ .++++++++.+.+.. ++|++ ++||+++.+|+.++ +.+++|++
T Consensus 151 ~~~~~~~~~~~~~g~~eil~t~Id~DGt~-----~G~d~~l~~~l~~~~~~ipvi--asGGv~~~~Dl~~l-~~~~~gvi 222 (243)
T 4gj1_A 151 KKLMEVLDFYSNKGLKHILCTDISKDGTM-----QGVNVRLYKLIHEIFPNICIQ--ASGGVASLKDLENL-KGICSGVI 222 (243)
T ss_dssp CBHHHHHHHHHTTTCCEEEEEETTC----------CCCHHHHHHHHHHCTTSEEE--EESCCCSHHHHHHT-TTTCSEEE
T ss_pred chHHHHHHHHhhcCCcEEEeeeecccccc-----cCCCHHHHHHHHHhcCCCCEE--EEcCCCCHHHHHHH-HccCchhe
Confidence 2245555554333 6677788888763 577899999998764 79998 89999999999886 56799999
Q ss_pred EccccccC
Q 021575 251 VGSGVFKS 258 (310)
Q Consensus 251 VGsai~~a 258 (310)
+|++|+..
T Consensus 223 vg~Al~~g 230 (243)
T 4gj1_A 223 VGKALLDG 230 (243)
T ss_dssp ECHHHHTT
T ss_pred hHHHHHCC
Confidence 99999974
No 23
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=99.67 E-value=2.5e-15 Score=133.39 Aligned_cols=175 Identities=21% Similarity=0.322 Sum_probs=132.0
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceee---ccc------cC-cHHHHHHHHHcCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMA---KAR------IG-HFVEAQILEAIGI 115 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~v---k~~------~~-~~~~a~~~~~aGa 115 (310)
++|+++.++|++++ .++ .++.++.+++.+++|++. +++ ++ ..+.++.+.++|+
T Consensus 40 ~~a~~~~~~G~~~i-~~~----------------~~~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Ga 102 (234)
T 1yxy_A 40 LMAKAAQEAGAVGI-RAN----------------SVRDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNI 102 (234)
T ss_dssp HHHHHHHHHTCSEE-EEE----------------SHHHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTC
T ss_pred HHHHHHHHCCCcEe-ecC----------------CHHHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcCC
Confidence 58999999999987 431 167899999999999852 221 11 3467889999999
Q ss_pred CEEE-eCCCC------CchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEE--EEcCCCCCcchHHHHHHHHhhcc
Q 021575 116 DYVD-ESEVL------TPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMI--RTKGEAGTGNIIEAVRHVRSVMG 186 (310)
Q Consensus 116 d~Vi-~~~~~------~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V--~v~g~~~~~~~~~~~~~~r~~~~ 186 (310)
|.|. ..... ...++.+.+++...++.++++++|.+++.++.+.|+|+| .+++... +.
T Consensus 103 d~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t~~ea~~a~~~Gad~i~~~v~g~~~-~~------------- 168 (234)
T 1yxy_A 103 AVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADISTFDEGLVAHQAGIDFVGTTLSGYTP-YS------------- 168 (234)
T ss_dssp SEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSSHHHHHHHHHTTCSEEECTTTTSST-TS-------------
T ss_pred CEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeCCCHHHHHHHHHcCCCEEeeeccccCC-CC-------------
Confidence 9995 33221 235666777664457889999999999999999999999 4544321 10
Q ss_pred ceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHH
Q 021575 187 DIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQ 266 (310)
Q Consensus 187 ~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~ 266 (310)
. ....+.++.++++++. ++||+ ++|||+|++|+.+++++|||+|++||+|++ |...++
T Consensus 169 --------~--------~~~~~~~~~i~~~~~~-~ipvi--a~GGI~s~~~~~~~~~~Gad~v~vGsal~~---p~~~~~ 226 (234)
T 1yxy_A 169 --------R--------QEAGPDVALIEALCKA-GIAVI--AEGKIHSPEEAKKINDLGVAGIVVGGAITR---PKEIAE 226 (234)
T ss_dssp --------C--------CSSSCCHHHHHHHHHT-TCCEE--EESCCCSHHHHHHHHTTCCSEEEECHHHHC---HHHHHH
T ss_pred --------c--------CCCCCCHHHHHHHHhC-CCCEE--EECCCCCHHHHHHHHHCCCCEEEEchHHhC---hHHHHH
Confidence 0 0123457778888876 89998 789999999999999999999999999996 888888
Q ss_pred HHHHHHh
Q 021575 267 AIVRAVT 273 (310)
Q Consensus 267 ~l~~~i~ 273 (310)
+|++.++
T Consensus 227 ~l~~~~~ 233 (234)
T 1yxy_A 227 RFIEALK 233 (234)
T ss_dssp HHHHHTC
T ss_pred HHHHHHh
Confidence 8877654
No 24
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.66 E-value=2.9e-15 Score=139.70 Aligned_cols=203 Identities=17% Similarity=0.171 Sum_probs=149.3
Q ss_pred cCcceeecchhhhhhCcccccCCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccc
Q 021575 21 KSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKAR 100 (310)
Q Consensus 21 ~~~~~~~~~~~~~~~~g~i~~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~ 100 (310)
...|++++|+++ +.+..+++++++.++.++|+.+++.....+. ....+.++++++.++.|+.++..
T Consensus 20 ~~~l~~~~Pii~----apM~gvs~~~la~av~~aGglG~i~~~~~~~----------~~l~~~i~~i~~~~~~p~gVnl~ 85 (326)
T 3bo9_A 20 TDLLEIEHPILM----GGMAWAGTPTLAAAVSEAGGLGIIGSGAMKP----------DDLRKAISELRQKTDKPFGVNII 85 (326)
T ss_dssp HHHHTCSSSEEE----CCCTTTSCHHHHHHHHHTTSBEEEECTTCCH----------HHHHHHHHHHHTTCSSCEEEEEE
T ss_pred HHhcCCCCCEEE----CCCCCCCCHHHHHHHHhCCCcEEeCCCCCCH----------HHHHHHHHHHHHhcCCCEEEEEe
Confidence 557888999998 5555799999999999999887743310000 00024566677767789998866
Q ss_pred c-C--cHHHHHHHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHH
Q 021575 101 I-G--HFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEA 177 (310)
Q Consensus 101 ~-~--~~~~a~~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~ 177 (310)
. . ..+.++.+.++|+|.|...... +.++.+.++. .++++++.+.+.+++.++.+.|+|+|.+.++...++.
T Consensus 86 ~~~~~~~~~~~~~~~~g~d~V~l~~g~-p~~~~~~l~~--~g~~v~~~v~s~~~a~~a~~~GaD~i~v~g~~~GG~~--- 159 (326)
T 3bo9_A 86 LVSPWADDLVKVCIEEKVPVVTFGAGN-PTKYIRELKE--NGTKVIPVVASDSLARMVERAGADAVIAEGMESGGHI--- 159 (326)
T ss_dssp TTSTTHHHHHHHHHHTTCSEEEEESSC-CHHHHHHHHH--TTCEEEEEESSHHHHHHHHHTTCSCEEEECTTSSEEC---
T ss_pred ccCCCHHHHHHHHHHCCCCEEEECCCC-cHHHHHHHHH--cCCcEEEEcCCHHHHHHHHHcCCCEEEEECCCCCccC---
Confidence 5 1 2467788999999999744332 4666666654 4678888999999999999999999999875433320
Q ss_pred HHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 021575 178 VRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 178 ~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~ 257 (310)
+..+++++++++++..++||+ ++|||++++|+.+++.+|||+|++||+|+.
T Consensus 160 ---------------------------G~~~~~~ll~~i~~~~~iPvi--aaGGI~~~~dv~~al~~GA~gV~vGs~~~~ 210 (326)
T 3bo9_A 160 ---------------------------GEVTTFVLVNKVSRSVNIPVI--AAGGIADGRGMAAAFALGAEAVQMGTRFVA 210 (326)
T ss_dssp ---------------------------CSSCHHHHHHHHHHHCSSCEE--EESSCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred ---------------------------CCccHHHHHHHHHHHcCCCEE--EECCCCCHHHHHHHHHhCCCEEEechHHHc
Confidence 112457788888877789998 789999999999999999999999999998
Q ss_pred CCCHHHHHHHHHHHHh
Q 021575 258 SGDPVKRAQAIVRAVT 273 (310)
Q Consensus 258 a~dp~~~a~~l~~~i~ 273 (310)
+++. ...+.+++.+.
T Consensus 211 ~~e~-~~~~~~k~~~~ 225 (326)
T 3bo9_A 211 SVES-DVHPVYKEKIV 225 (326)
T ss_dssp BSSC-CSCHHHHHHHH
T ss_pred Cccc-cccHHHHHHHH
Confidence 7654 23334555553
No 25
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.64 E-value=6.9e-15 Score=137.12 Aligned_cols=207 Identities=18% Similarity=0.232 Sum_probs=148.2
Q ss_pred cCcceeecchhhhhhCcccccCCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccc
Q 021575 21 KSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKAR 100 (310)
Q Consensus 21 ~~~~~~~~~~~~~~~~g~i~~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~ 100 (310)
...|++++|+++ +.+..+++++++.++.++|+.+++...... + .....+.++++++.++.|+.++..
T Consensus 9 ~~~l~~~~Pii~----apM~gvs~~~la~av~~aGglG~i~~~~~~--------s-~~~l~~~i~~i~~~~~~p~~v~l~ 75 (328)
T 2gjl_A 9 TETFGVEHPIMQ----GGMQWVGRAEMAAAVANAGGLATLSALTQP--------S-PEALAAEIARCRELTDRPFGVNLT 75 (328)
T ss_dssp HHHHTCSSSEEE----CCCTTTCSHHHHHHHHHTTSBCEEETTTSS--------S-HHHHHHHHHHHHHHCSSCCEEEEE
T ss_pred HHHhCCCCCEEE----CCCCCCCcHHHHHHHHHCCCeEEeCCCCCC--------C-HHHHHHHHHHHHHhcCCCeEEEEe
Confidence 346788999998 445679999999999999987764321000 0 000124566677777888888765
Q ss_pred cC-------cHHHHHHHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcc
Q 021575 101 IG-------HFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGN 173 (310)
Q Consensus 101 ~~-------~~~~a~~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~ 173 (310)
.. ..+.++.+.++|+|.|...... +.++.+.+++. +++++..+.+.+++.++.+.|+|++.+.+....++
T Consensus 76 v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~-p~~~~~~l~~~--gi~vi~~v~t~~~a~~~~~~GaD~i~v~g~~~GG~ 152 (328)
T 2gjl_A 76 LLPTQKPVPYAEYRAAIIEAGIRVVETAGND-PGEHIAEFRRH--GVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGH 152 (328)
T ss_dssp ECCCSSCCCHHHHHHHHHHTTCCEEEEEESC-CHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCSEEEEECTTCSBC
T ss_pred ccccccCccHHHHHHHHHhcCCCEEEEcCCC-cHHHHHHHHHc--CCCEEeeCCCHHHHHHHHHcCCCEEEEECCCCCcC
Confidence 53 1367789999999999643332 45666666553 67888889999999999999999999877543332
Q ss_pred hHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcc
Q 021575 174 IIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGS 253 (310)
Q Consensus 174 ~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGs 253 (310)
. . .....++++++++++..++||+ ++|||++++|+.+++.+|||+|++||
T Consensus 153 ~--------------------G--------~~~~~~~~~l~~v~~~~~iPvi--aaGGI~~~~~v~~al~~GAdgV~vGs 202 (328)
T 2gjl_A 153 P--------------------G--------EDDIPGLVLLPAAANRLRVPII--ASGGFADGRGLVAALALGADAINMGT 202 (328)
T ss_dssp C--------------------C--------SSCCCHHHHHHHHHTTCCSCEE--EESSCCSHHHHHHHHHHTCSEEEESH
T ss_pred C--------------------C--------CccccHHHHHHHHHHhcCCCEE--EECCCCCHHHHHHHHHcCCCEEEECH
Confidence 0 0 0012457888888887899998 68999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHhc
Q 021575 254 GVFKSGDPVKRAQAIVRAVTH 274 (310)
Q Consensus 254 ai~~a~dp~~~a~~l~~~i~~ 274 (310)
+|+.+++. ...+.+++.+.+
T Consensus 203 ~~~~~~e~-~~~~~~k~~~~~ 222 (328)
T 2gjl_A 203 RFLATREC-PIHPAVKAAIRA 222 (328)
T ss_dssp HHHTSSSS-CSCHHHHHHHHH
T ss_pred HHHcCccc-cccHHHHHHHHh
Confidence 99997653 233345555543
No 26
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.64 E-value=2.2e-16 Score=141.40 Aligned_cols=181 Identities=17% Similarity=0.226 Sum_probs=59.9
Q ss_pred HHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEE-eCCC
Q 021575 45 PEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVD-ESEV 123 (310)
Q Consensus 45 ~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi-~~~~ 123 (310)
.+.|+.++++|+++|...+ ... .+.....+.+.++++++.+++|+++...+...++++.+.+.|||.|+ ++..
T Consensus 38 ~~~a~~~~~~G~~~i~v~d-----~~~-~~~~~~~~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~ 111 (247)
T 3tdn_A 38 RDWVVEVEKRGAGEILLTS-----IDR-DGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSINTAA 111 (247)
T ss_dssp HHHHHHHHHTTCSEEEEEE-----TTT-TTCSSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEECCSHHH
T ss_pred HHHHHHHHHcCCCEEEEEe-----cCc-ccCCCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHH
Confidence 3899999999999982211 111 01112345789999999999999999888877889999999999996 4433
Q ss_pred CC-chhHHHHHHhcCCC-CcEEEecCC--------------------HHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHH
Q 021575 124 LT-PADEENHINKHNFR-IPFVCGCRN--------------------LGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 181 (310)
Q Consensus 124 ~~-~~~~~~~i~~~~~~-i~~~v~~~t--------------------~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~ 181 (310)
+. |..+.+..+..+.+ +.+.+++++ .+.++++.+.|++.+.++..
T Consensus 112 l~dp~~~~~~~~~~g~~~iv~~ld~~~~~~~~~v~~~g~~~~~~~~~~~~a~~~~~~G~~~i~~t~~------------- 178 (247)
T 3tdn_A 112 VENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSI------------- 178 (247)
T ss_dssp HHCTHHHHHHHHHHC-----------------------------------------------------------------
T ss_pred hhChHHHHHHHHHhCCCcEEEEEEeccCCCCEEEEECCCcccCCCCHHHHHHHHHhcCCCEEEEecc-------------
Confidence 33 33334444434433 333444432 11233334455555544322
Q ss_pred HhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCH
Q 021575 182 RSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDP 261 (310)
Q Consensus 182 r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp 261 (310)
++++. ..++++++++++++..++||+ ++|||++++|+.++++.|||+|+|||+|++.+++
T Consensus 179 -------------~~~g~-----~~g~~~~~~~~i~~~~~iPvi--a~GGI~~~~d~~~~~~~Gad~v~vg~al~~~p~~ 238 (247)
T 3tdn_A 179 -------------DRDGT-----KSGYDTEMIRFVRPLTTLPII--ASGGAGKMEHFLEAFLRGADKVSINTAAVENPSL 238 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------cCCCC-----cCCCCHHHHHHHHHhCCCCEE--EECCCCCHHHHHHHHHcCCcHhhccHHHHcCcHH
Confidence 11111 123457788888887899998 8899999999999999999999999999986666
Q ss_pred HHH
Q 021575 262 VKR 264 (310)
Q Consensus 262 ~~~ 264 (310)
...
T Consensus 239 ~~~ 241 (247)
T 3tdn_A 239 ITQ 241 (247)
T ss_dssp ---
T ss_pred HHH
Confidence 543
No 27
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.62 E-value=1.5e-14 Score=135.19 Aligned_cols=204 Identities=19% Similarity=0.204 Sum_probs=147.6
Q ss_pred CcceeecchhhhhhCcccccCCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeecccc
Q 021575 22 SPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARI 101 (310)
Q Consensus 22 ~~~~~~~~~~~~~~~g~i~~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~ 101 (310)
..|++++|+++ +.+..+++++++.++.++|+.+++.....+. ....+.++++++.++.|+.++...
T Consensus 7 ~~l~~~~Pii~----apM~g~s~~~la~av~~aG~lG~i~~~~~~~----------~~~~~~i~~i~~~~~~p~gvnl~~ 72 (332)
T 2z6i_A 7 ELLKIDYPIFQ----GGMAWVADGDLAGAVSKAGGLGIIGGGNAPK----------EVVKANIDKIKSLTDKPFGVNIML 72 (332)
T ss_dssp HHHTCSSSEEE----CCCTTTCCHHHHHHHHHHTSBEEEECTTCCH----------HHHHHHHHHHHHHCCSCEEEEECT
T ss_pred HHhCCCCCEEe----CCCCCCCcHHHHHHHHhCCCcEEeCCCCCCH----------HHHHHHHHHHHHhcCCCEEEEecC
Confidence 45778899988 4445789999999999999876644310000 001245666676678899888765
Q ss_pred -C--cHHHHHHHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHH
Q 021575 102 -G--HFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAV 178 (310)
Q Consensus 102 -~--~~~~a~~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~ 178 (310)
. +.+.++.+.++|+|+|..... .|.++.+.+++ .++++++.+.+.+++.++.+.|+|+|.+.|....++.
T Consensus 73 ~~~~~~~~~~~a~~~g~d~V~~~~g-~p~~~i~~l~~--~g~~v~~~v~~~~~a~~~~~~GaD~i~v~g~~~GG~~---- 145 (332)
T 2z6i_A 73 LSPFVEDIVDLVIEEGVKVVTTGAG-NPSKYMERFHE--AGIIVIPVVPSVALAKRMEKIGADAVIAEGMEAGGHI---- 145 (332)
T ss_dssp TSTTHHHHHHHHHHTTCSEEEECSS-CGGGTHHHHHH--TTCEEEEEESSHHHHHHHHHTTCSCEEEECTTSSEEC----
T ss_pred CCCCHHHHHHHHHHCCCCEEEECCC-ChHHHHHHHHH--cCCeEEEEeCCHHHHHHHHHcCCCEEEEECCCCCCCC----
Confidence 2 245678899999999975444 35666677765 3678888899999999999999999999875322210
Q ss_pred HHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 021575 179 RHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 179 ~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a 258 (310)
+...++++++++++..++||+ ++|||++++++.+++.+|||+|++||+|+..
T Consensus 146 --------------------------g~~~~~~ll~~i~~~~~iPVi--aaGGI~~~~~~~~al~~GAdgV~vGs~~l~~ 197 (332)
T 2z6i_A 146 --------------------------GKLTTMTLVRQVATAISIPVI--AAGGIADGEGAAAGFMLGAEAVQVGTRFVVA 197 (332)
T ss_dssp --------------------------CSSCHHHHHHHHHHHCSSCEE--EESSCCSHHHHHHHHHTTCSEEEECHHHHTB
T ss_pred --------------------------CCccHHHHHHHHHHhcCCCEE--EECCCCCHHHHHHHHHcCCCEEEecHHHhcC
Confidence 113457788888887899998 7899999999999999999999999999986
Q ss_pred CCHHHHHHHHHHHHhcc
Q 021575 259 GDPVKRAQAIVRAVTHY 275 (310)
Q Consensus 259 ~dp~~~a~~l~~~i~~~ 275 (310)
++. ...+.+++.+.+.
T Consensus 198 ~e~-~~~~~~k~~~~~~ 213 (332)
T 2z6i_A 198 KES-NAHPNYKEKILKA 213 (332)
T ss_dssp TTC-CSCHHHHHHHHHC
T ss_pred ccc-cccHHHHHHHHhC
Confidence 543 2233455555443
No 28
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=99.62 E-value=3.4e-15 Score=134.99 Aligned_cols=203 Identities=17% Similarity=0.162 Sum_probs=132.8
Q ss_pred ceeecchhhhhhCcccccC------------CCH-HHHHHHHHcCCcEE--EeccCCcccccccCCCCCCCCHHHHHHHH
Q 021575 24 FSVKVGLAQMLRGGVIMDV------------VTP-EQARVAEEAGACAV--MALERVPADIRSQGGVARMSDPQLIKEIK 88 (310)
Q Consensus 24 ~~~~~~~~~~~~~g~i~~~------------~~~-~~A~~~~~~Ga~~i--~~L~~~~~~~~~~~G~~~~~~~~~i~~i~ 88 (310)
+-++.|.++++.+|.+.+. .+| ++|+.|.+.||+++ ++|++ .+.+.+++++
T Consensus 7 iDl~~G~~V~~~~G~~~~~~~~~~~~~~~~~~dp~~~A~~~~~~Ga~~l~vvDL~~--------------~n~~~i~~i~ 72 (260)
T 2agk_A 7 IDLHNGEVKQIVGGTLTSKKEDVPKTNFVSQHPSSYYAKLYKDRDVQGCHVIKLGP--------------NNDDAAREAL 72 (260)
T ss_dssp EEEETTEECC--------------------CCCHHHHHHHHHHTTCTTCEEEEESS--------------SCHHHHHHHH
T ss_pred EEEECCEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCCEEEEEeCCC--------------CCHHHHHHHH
Confidence 3466777887777755433 356 78999999999987 56642 2478999999
Q ss_pred hhcCcceeeccccCcHHHHHHHHHcCCCEEE-eCCCCCc-----hhH-HHHHHhcC-CCCcEEEecCCHHHHHHHHHhCC
Q 021575 89 QSVTIPVMAKARIGHFVEAQILEAIGIDYVD-ESEVLTP-----ADE-ENHINKHN-FRIPFVCGCRNLGEALRRIREGA 160 (310)
Q Consensus 89 ~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi-~~~~~~~-----~~~-~~~i~~~~-~~i~~~v~~~t~~ea~~~~~~Ga 160 (310)
+.+.+|+++...+... +++.+. +|||.|+ .+..+.. +++ .+++++.+ -.+.+.++++.. +-+-
T Consensus 73 ~~~~~pv~vgGGir~~-~~~~~l-~Ga~~Viigs~a~~~~g~~~p~~~~~~~~~~g~~~ivv~iD~k~~-------~~~g 143 (260)
T 2agk_A 73 QESPQFLQVGGGINDT-NCLEWL-KWASKVIVTSWLFTKEGHFQLKRLERLTELCGKDRIVVDLSCRKT-------QDGR 143 (260)
T ss_dssp HHSTTTSEEESSCCTT-THHHHT-TTCSCEEECGGGBCTTCCBCHHHHHHHHHHHCGGGEEEEEEEEEE-------ETTE
T ss_pred hcCCceEEEeCCCCHH-HHHHHh-cCCCEEEECcHHHhhcCCCCHHHHHHHHHHhCcCcEEEEEEeeec-------CCCc
Confidence 9999999997666544 788888 9999996 5554443 444 45555444 235666666421 0001
Q ss_pred CEEEEcCCCC-Cc-chH-HHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcC----CCCEEEeCCCCCC
Q 021575 161 AMIRTKGEAG-TG-NII-EAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG----RLPVVHFAAGGVA 233 (310)
Q Consensus 161 d~V~v~g~~~-~~-~~~-~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~----~iPVi~iA~GGI~ 233 (310)
..|.++||.. ++ ++. +..+...+. ...-+++..++|+++ .++++++++++++.+ ++||+ ++|||+
T Consensus 144 ~~V~~~gw~~~t~~~~~~e~a~~~~~~-a~~il~t~i~~dG~~-----~G~d~eli~~l~~~~~~~~~iPVI--asGGi~ 215 (260)
T 2agk_A 144 WIVAMNKWQTLTDLELNADTFRELRKY-TNEFLIHAADVEGLC-----GGIDELLVSKLFEWTKDYDDLKIV--YAGGAK 215 (260)
T ss_dssp EEEEETTTTEEEEEEESHHHHHHHTTT-CSEEEEEC------------CCCCHHHHHHHHHHHTTCSSCEEE--EESCCC
T ss_pred eEEEEcCCccccCccHHHHHHHHHHHh-cCEEEEEeeccccCc-----CCCCHHHHHHHHHhhcccCCceEE--EeCCCC
Confidence 2667777743 22 223 444444445 445566776766652 456899999999887 89998 899999
Q ss_pred CHHHHHHHHHc--CCCEEEEcccc--cc
Q 021575 234 TPADAAMMMQL--GCDGVFVGSGV--FK 257 (310)
Q Consensus 234 t~~d~~~~l~~--GadgV~VGsai--~~ 257 (310)
+++|+.++++. |+++|++||++ +.
T Consensus 216 s~ed~~~l~~~~~G~~gvivg~al~l~~ 243 (260)
T 2agk_A 216 SVDDLKLVDELSHGKVDLTFGSSLDIFG 243 (260)
T ss_dssp CTHHHHHHHHHHTTCEEEECCTTBGGGT
T ss_pred CHHHHHHHHHhcCCCCEEEeeCCHHHcC
Confidence 99999999987 99999999997 65
No 29
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=99.60 E-value=2.4e-14 Score=141.47 Aligned_cols=183 Identities=15% Similarity=0.186 Sum_probs=132.0
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCC--CCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEE-eCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVAR--MSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVD-ESE 122 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~--~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi-~~~ 122 (310)
+.++++.++|+++| +|. .+..+.. ....+.++++++.+++|++++++. +.+.+.|+|+|. .++
T Consensus 29 ~~ve~al~~Gv~~v-QlR-------~K~~~~~~~~~~a~~l~~l~~~~~v~liIND~~------dlA~~~gAdGVHLgq~ 94 (540)
T 3nl6_A 29 GQVEAGLQNGVTLV-QIR-------EKDADTKFFIEEALQIKELCHAHNVPLIINDRI------DVAMAIGADGIHVGQD 94 (540)
T ss_dssp HHHHHHHHTTCSEE-EEC-------CSSSCTTHHHHHHHHHHHHHHHTTCCEEECSCS------HHHHHTTCSEEEECTT
T ss_pred HHHHHHHHCCCCEE-EEe-------cCCCCHHHHHHHHHHHHHHHHhcCCEEEEeCcH------HHHHHcCCCEEEEChh
Confidence 77888999999976 873 3221110 111234445566789999998753 357789999995 677
Q ss_pred CCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhC---CCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHH
Q 021575 123 VLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREG---AAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEV 199 (310)
Q Consensus 123 ~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~G---ad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~ 199 (310)
+++..+.++.+ +.+..++++++|.+|+.++.+.| +|||.+..- +++.++.+.
T Consensus 95 dl~~~~ar~~l---g~~~iiG~S~ht~eea~~A~~~G~~~aDYv~~Gpv----------------------f~T~tK~~~ 149 (540)
T 3nl6_A 95 DMPIPMIRKLV---GPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTL----------------------FPTLTKKNP 149 (540)
T ss_dssp SSCHHHHHHHH---CTTSEEEEEECSHHHHHHHHHTCC--CCEEEESCC----------------------SCCCCCC--
T ss_pred hcCHHHHHHHh---CCCCEEEEECCCHHHHHHHHHcCCCCCCEEEEcCC----------------------CCCCCCCCc
Confidence 77666665543 56789999999999999999999 999998532 222221100
Q ss_pred HHhhhc-cCCcHHHHHHHhhc------CCCCEEEeCCCCCCCHHHHHHHHH--------cCCCEEEEccccccCCCHHHH
Q 021575 200 FTFAKK-IAAPYDLVMQTKQL------GRLPVVHFAAGGVATPADAAMMMQ--------LGCDGVFVGSGVFKSGDPVKR 264 (310)
Q Consensus 200 ~~~~~~-~~~~~~~i~~i~~~------~~iPVi~iA~GGI~t~~d~~~~l~--------~GadgV~VGsai~~a~dp~~~ 264 (310)
. ....++.++++.+. .++|+++| ||| +++++.++++ +|+|||.|+|+|++++||...
T Consensus 150 -----~~~~~G~~~l~~i~~~~~~~~~~~iPvvAI--GGI-~~~ni~~v~~~~~~~g~~~GadgvAVvsaI~~a~dp~~a 221 (540)
T 3nl6_A 150 -----KKAPMGTAGAIRVLDALERNNAHWCRTVGI--GGL-HPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKS 221 (540)
T ss_dssp -------CCCHHHHHHHHHHHHHHTTCTTCEEEEE--SSC-CTTTHHHHHHHCBCTTSSCBCSCEEESHHHHTCTTHHHH
T ss_pred -----CCCCCCHHHHHHHHHHHHhhccCCCCEEEE--cCC-CHHHHHHHHHhhcccccccCceEEEEeHHHhcCCCHHHH
Confidence 0 01124455555443 47999955 999 7999999998 899999999999999999999
Q ss_pred HHHHHHHHhcc
Q 021575 265 AQAIVRAVTHY 275 (310)
Q Consensus 265 a~~l~~~i~~~ 275 (310)
+++|.+.++++
T Consensus 222 ~~~l~~~~~~~ 232 (540)
T 3nl6_A 222 TKILRGLIDKT 232 (540)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHHhC
Confidence 99999999874
No 30
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.59 E-value=5.4e-14 Score=132.68 Aligned_cols=194 Identities=18% Similarity=0.217 Sum_probs=135.0
Q ss_pred cceeecchhhhhhCcccccCCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccC
Q 021575 23 PFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIG 102 (310)
Q Consensus 23 ~~~~~~~~~~~~~~g~i~~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~ 102 (310)
.+++..|++. +.|..++++++|.++.+.|..+++.-+..+. ...+.++++++...+|+.++...+
T Consensus 41 ~~~l~~Pii~----apM~~vt~~~lA~avA~~GGlgii~~~~s~e-----------~~~~~I~~vk~~~~~pvga~ig~~ 105 (361)
T 3khj_A 41 NVSLKIPLIS----SAMDTVTEHLMAVGMARLGGIGIIHKNMDME-----------SQVNEVLKVKNSGGLRVGAAIGVN 105 (361)
T ss_dssp SCEESSSEEE----CSSTTTCSHHHHHHHHHTTCEEEECSSSCHH-----------HHHHHHHHHHHTTCCCCEEEECTT
T ss_pred ccccCCCEEe----ecCCCCCcHHHHHHHHHcCCCeEEecCCCHH-----------HHHHHHHHHHhccCceEEEEeCCC
Confidence 5778889888 6677899999999998888776643221110 114567777777789998887665
Q ss_pred cHHHHHHHHHcCCCEEEe-CCCCCchh---HHHHHHhcCCCCcEEE-ecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHH
Q 021575 103 HFVEAQILEAIGIDYVDE-SEVLTPAD---EENHINKHNFRIPFVC-GCRNLGEALRRIREGAAMIRTKGEAGTGNIIEA 177 (310)
Q Consensus 103 ~~~~a~~~~~aGad~Vi~-~~~~~~~~---~~~~i~~~~~~i~~~v-~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~ 177 (310)
..+.++.+.++|+|.|+. +..-.+.. ..+.+++. .++++++ .+.|.++++++.++|+|+|.+....+ .++..
T Consensus 106 ~~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~-~~~~Vivg~v~t~e~A~~l~~aGaD~I~VG~~~G--s~~~t 182 (361)
T 3khj_A 106 EIERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSK-MNIDVIVGNVVTEEATKELIENGADGIKVGIGPG--SICTT 182 (361)
T ss_dssp CHHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHH-CCCEEEEEEECSHHHHHHHHHTTCSEEEECSSCC--TTCCH
T ss_pred HHHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHh-cCCcEEEccCCCHHHHHHHHHcCcCEEEEecCCC--cCCCc
Confidence 568889999999999963 22222333 33333332 3777776 78999999999999999999843222 11100
Q ss_pred HHHHHhhccceEeecccChhHHHHhhhcc-CCcHHHHHHHhh---cCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcc
Q 021575 178 VRHVRSVMGDIRVLRNMDDDEVFTFAKKI-AAPYDLVMQTKQ---LGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGS 253 (310)
Q Consensus 178 ~~~~r~~~~~~~~l~~~~~d~~~~~~~~~-~~~~~~i~~i~~---~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGs 253 (310)
+ .+ ... .+.+..+.++.+ ..++||+ |+|||++++|+.+++.+|||+|++||
T Consensus 183 ----r-------~~------------~g~g~p~~~~i~~v~~~~~~~~iPVI--A~GGI~~~~di~kala~GAd~V~vGs 237 (361)
T 3khj_A 183 ----R-------IV------------AGVGVPQITAIEKCSSVASKFGIPII--ADGGIRYSGDIGKALAVGASSVMIGS 237 (361)
T ss_dssp ----H-------HH------------TCBCCCHHHHHHHHHHHHHHHTCCEE--EESCCCSHHHHHHHHHHTCSEEEEST
T ss_pred ----c-------cc------------cCCCCCcHHHHHHHHHHHhhcCCeEE--EECCCCCHHHHHHHHHcCCCEEEECh
Confidence 0 00 011 233555555532 2479998 78999999999999999999999999
Q ss_pred ccccCC
Q 021575 254 GVFKSG 259 (310)
Q Consensus 254 ai~~a~ 259 (310)
+|+.++
T Consensus 238 ~~~~t~ 243 (361)
T 3khj_A 238 ILAGTE 243 (361)
T ss_dssp TTTTBT
T ss_pred hhhcCC
Confidence 999865
No 31
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=99.59 E-value=3e-14 Score=124.50 Aligned_cols=174 Identities=20% Similarity=0.263 Sum_probs=126.7
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccc-cCcHHHHHHHHHcCCCEEEeCCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKAR-IGHFVEAQILEAIGIDYVDESEVL 124 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~-~~~~~~a~~~~~aGad~Vi~~~~~ 124 (310)
+.++.+.++|+++| +++ ... ....+.++++++.+++|++++.. +...+.++.+.++|+|+|....
T Consensus 23 ~~~~~~~~~G~~~i-~l~-------~~~----~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~~~-- 88 (212)
T 2v82_A 23 AHVGAVIDAGFDAV-EIP-------LNS----PQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVTPN-- 88 (212)
T ss_dssp HHHHHHHHHTCCEE-EEE-------TTS----TTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEEECSS--
T ss_pred HHHHHHHHCCCCEE-EEe-------CCC----hhHHHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEEEeCC--
Confidence 67889999999987 652 111 11146777777778888887432 1234678999999999997322
Q ss_pred CchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhh
Q 021575 125 TPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAK 204 (310)
Q Consensus 125 ~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~ 204 (310)
...++.+.++. .+..++++++|.+++.++.+.|+|+|.+++. .
T Consensus 89 ~~~~~~~~~~~--~g~~~~~g~~t~~e~~~a~~~G~d~v~v~~t---~-------------------------------- 131 (212)
T 2v82_A 89 IHSEVIRRAVG--YGMTVCPGCATATEAFTALEAGAQALKIFPS---S-------------------------------- 131 (212)
T ss_dssp CCHHHHHHHHH--TTCEEECEECSHHHHHHHHHTTCSEEEETTH---H--------------------------------
T ss_pred CCHHHHHHHHH--cCCCEEeecCCHHHHHHHHHCCCCEEEEecC---C--------------------------------
Confidence 23445555544 3555566789999999999999999987531 0
Q ss_pred ccCCcHHHHHHHhhcCC--CCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccC----CCHHHHHHHHHHHHhcc
Q 021575 205 KIAAPYDLVMQTKQLGR--LPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS----GDPVKRAQAIVRAVTHY 275 (310)
Q Consensus 205 ~~~~~~~~i~~i~~~~~--iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a----~dp~~~a~~l~~~i~~~ 275 (310)
...++.++++++..+ +|++ +.|||+ ++|+.+++++|+++|++||+|+++ +||...+++|++.+++.
T Consensus 132 --~~g~~~~~~l~~~~~~~ipvi--a~GGI~-~~~i~~~~~~Ga~gv~vGsai~~~~~~~~d~~~~~~~l~~~~~~~ 203 (212)
T 2v82_A 132 --AFGPQYIKALKAVLPSDIAVF--AVGGVT-PENLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAFVKAYREA 203 (212)
T ss_dssp --HHCHHHHHHHHTTSCTTCEEE--EESSCC-TTTHHHHHHHTCSEEEECTTTCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHhccCCCeEE--EeCCCC-HHHHHHHHHcCCCEEEEChHHhCCCCCHHHHHHHHHHHHHHHHHH
Confidence 001455666666554 8998 679995 999999999999999999999997 68988888888877654
No 32
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=99.57 E-value=2.9e-14 Score=126.79 Aligned_cols=179 Identities=20% Similarity=0.190 Sum_probs=124.0
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEEeC-CCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDES-EVL 124 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi~~-~~~ 124 (310)
+.++.+.++|++++...+.. . .+.......+.++++++.+++|+++...+...++++.+.++|||+|... ..+
T Consensus 37 ~~a~~~~~~G~d~i~v~~~~----~--~~~~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~~ 110 (253)
T 1h5y_A 37 EMAVRYEEEGADEIAILDIT----A--APEGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAV 110 (253)
T ss_dssp HHHHHHHHTTCSCEEEEECC----C--CTTTHHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred HHHHHHHHcCCCEEEEEeCC----c--cccCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEEChHHh
Confidence 78999999999987222110 0 0000111367888899889999999888777778899999999999633 222
Q ss_pred -CchhHHHHHHhcCCC-CcEEEecC--------------------CHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHH
Q 021575 125 -TPADEENHINKHNFR-IPFVCGCR--------------------NLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVR 182 (310)
Q Consensus 125 -~~~~~~~~i~~~~~~-i~~~v~~~--------------------t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r 182 (310)
.+..+.+..+..+.. +.+.++++ ..+.+..+.+.|+++|.+++...++.
T Consensus 111 ~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~~g~--------- 181 (253)
T 1h5y_A 111 RNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDRDGT--------- 181 (253)
T ss_dssp HCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTT---------
T ss_pred hCcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccCCCC---------
Confidence 233344444443322 33343332 23557778889999998876432111
Q ss_pred hhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHH
Q 021575 183 SVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 183 ~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~ 262 (310)
..+..++.++++++..++|++ ++|||++++|+.+++++|||+|++||+|++.+++.
T Consensus 182 ----------------------~~~~~~~~i~~l~~~~~~pvi--a~GGi~~~~~~~~~~~~Ga~~v~vgsal~~~~~~~ 237 (253)
T 1h5y_A 182 ----------------------GLGYDVELIRRVADSVRIPVI--ASGGAGRVEHFYEAAAAGADAVLAASLFHFRVLSI 237 (253)
T ss_dssp ----------------------CSCCCHHHHHHHHHHCSSCEE--EESCCCSHHHHHHHHHTTCSEEEESHHHHTTSSCH
T ss_pred ----------------------cCcCCHHHHHHHHHhcCCCEE--EeCCCCCHHHHHHHHHcCCcHHHHHHHHHcCCCCH
Confidence 123357778888877789998 78999999999999999999999999999977554
Q ss_pred H
Q 021575 263 K 263 (310)
Q Consensus 263 ~ 263 (310)
.
T Consensus 238 ~ 238 (253)
T 1h5y_A 238 A 238 (253)
T ss_dssp H
T ss_pred H
Confidence 3
No 33
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=99.56 E-value=2.9e-14 Score=129.12 Aligned_cols=181 Identities=17% Similarity=0.171 Sum_probs=125.2
Q ss_pred HHHHHHHHHcCCcEEEecc-----CC---ccccccc-----CCCCCCCCHHHHHHHHhh-cCcceeeccccC------cH
Q 021575 45 PEQARVAEEAGACAVMALE-----RV---PADIRSQ-----GGVARMSDPQLIKEIKQS-VTIPVMAKARIG------HF 104 (310)
Q Consensus 45 ~~~A~~~~~~Ga~~i~~L~-----~~---~~~~~~~-----~G~~~~~~~~~i~~i~~~-~~iPv~vk~~~~------~~ 104 (310)
.+.++.++++|||.| +|. |. |..++.. .|.+....++.++++|+. +++|+++....+ ..
T Consensus 35 ~~~~~~l~~~GaD~i-ElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e 113 (267)
T 3vnd_A 35 LKIIQTLVDNGADAL-ELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGID 113 (267)
T ss_dssp HHHHHHHHHTTCSSE-EEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHH
T ss_pred HHHHHHHHHcCCCEE-EECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHH
Confidence 367889999999987 554 21 2232222 344433447889999987 899998864432 35
Q ss_pred HHHHHHHHcCCCEEEeCCC--CCchhHHHHHHhcCCCCcEEEec-CCHHHHHHHHHhCCCEEEEcCC-CCCcchHHHHHH
Q 021575 105 VEAQILEAIGIDYVDESEV--LTPADEENHINKHNFRIPFVCGC-RNLGEALRRIREGAAMIRTKGE-AGTGNIIEAVRH 180 (310)
Q Consensus 105 ~~a~~~~~aGad~Vi~~~~--~~~~~~~~~i~~~~~~i~~~v~~-~t~~ea~~~~~~Gad~V~v~g~-~~~~~~~~~~~~ 180 (310)
.+++.+.++|+|+++.++. .+..++.+.+++++.....++.. .+.+.+....+.+.++|.+-.. +.||.-
T Consensus 114 ~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~gfvY~vS~~GvTG~~------ 187 (267)
T 3vnd_A 114 EFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTYLLSRAGVTGTE------ 187 (267)
T ss_dssp HHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEESCCCCCC---------
T ss_pred HHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEecCCCCCCc------
Confidence 6789999999999987764 23456677777777664444554 4556666677777777765322 223320
Q ss_pred HHhhccceEeecccChhHHHHhhhcc-CCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 021575 181 VRSVMGDIRVLRNMDDDEVFTFAKKI-AAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 181 ~r~~~~~~~~l~~~~~d~~~~~~~~~-~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~ 257 (310)
... ....++++++++..++|++ .+|||++++++.+.+..|||||+|||+|++
T Consensus 188 -----------------------~~~~~~~~~~v~~vr~~~~~pv~--vGfGI~~~e~~~~~~~~gADgvVVGSaiv~ 240 (267)
T 3vnd_A 188 -----------------------SKAGEPIENILTQLAEFNAPPPL--LGFGIAEPEQVRAAIKAGAAGAISGSAVVK 240 (267)
T ss_dssp ----------------------------CHHHHHHHHHTTTCCCEE--ECSSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred -----------------------cCCcHHHHHHHHHHHHhcCCCEE--EECCcCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 001 2235788889888889998 689999999999889999999999999996
No 34
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.55 E-value=2.1e-13 Score=128.62 Aligned_cols=196 Identities=14% Similarity=0.165 Sum_probs=131.6
Q ss_pred CcceeecchhhhhhCcccccCCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeecccc
Q 021575 22 SPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARI 101 (310)
Q Consensus 22 ~~~~~~~~~~~~~~~g~i~~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~ 101 (310)
..+++..|+++ +.+.+++++++|.++.++|.-+++.-+..+. ...+.++++++...+++.+....
T Consensus 41 ~~~~l~~Pii~----apM~~vs~~~lA~avA~aGGlg~i~~~~s~e-----------~~~~~i~~vk~~~~l~vga~vg~ 105 (366)
T 4fo4_A 41 KNIALNIPMVS----ASMDTVTEARLAIALAQEGGIGFIHKNMSIE-----------QQAAQVHQVKISGGLRVGAAVGA 105 (366)
T ss_dssp TTEEESSSEEE----CCCTTTCSHHHHHHHHHTTCEEEECSSSCHH-----------HHHHHHHHHHTTTSCCCEEECCS
T ss_pred cccccCCCEEe----CCCCCCChHHHHHHHHHcCCceEeecCCCHH-----------HHHHHHHHHHhcCceeEEEEecc
Confidence 35788999998 6677899999999999988877654321110 01345666665433444443322
Q ss_pred --CcHHHHHHHHHcCCCEEEe-CCCCCch---hHHHHHHhcCCCCcEEE-ecCCHHHHHHHHHhCCCEEEEcCCCCCcch
Q 021575 102 --GHFVEAQILEAIGIDYVDE-SEVLTPA---DEENHINKHNFRIPFVC-GCRNLGEALRRIREGAAMIRTKGEAGTGNI 174 (310)
Q Consensus 102 --~~~~~a~~~~~aGad~Vi~-~~~~~~~---~~~~~i~~~~~~i~~~v-~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~ 174 (310)
...+.++.+.++|+|.|.. +..-.+. +.++.+++..+++++++ .+.|.++++++.++|+|+|.+....++.
T Consensus 106 ~~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG~gpGs~-- 183 (366)
T 4fo4_A 106 APGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSI-- 183 (366)
T ss_dssp CTTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTT--
T ss_pred ChhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEEecCCCCC--
Confidence 3468899999999999853 2222233 33445555445777766 4899999999999999999983211111
Q ss_pred HHHHHHHHhhccceEeecccChhHHHHhhhcc-CCcHHHHHHHhh---cCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEE
Q 021575 175 IEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKI-AAPYDLVMQTKQ---LGRLPVVHFAAGGVATPADAAMMMQLGCDGVF 250 (310)
Q Consensus 175 ~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~-~~~~~~i~~i~~---~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~ 250 (310)
+.+ + .. ... .+.+..+.++.+ ..++||+ ++|||+++.|+.+++.+|||+|+
T Consensus 184 ~~t----r-------~~------------~g~g~p~~~~l~~v~~~~~~~~iPVI--A~GGI~~~~di~kala~GAd~V~ 238 (366)
T 4fo4_A 184 CTT----R-------IV------------TGVGVPQITAIADAAGVANEYGIPVI--ADGGIRFSGDISKAIAAGASCVM 238 (366)
T ss_dssp BCH----H-------HH------------HCCCCCHHHHHHHHHHHHGGGTCCEE--EESCCCSHHHHHHHHHTTCSEEE
T ss_pred CCc----c-------cc------------cCcccchHHHHHHHHHHHhhcCCeEE--EeCCCCCHHHHHHHHHcCCCEEE
Confidence 100 0 00 011 233555555543 4579998 78999999999999999999999
Q ss_pred EccccccCC
Q 021575 251 VGSGVFKSG 259 (310)
Q Consensus 251 VGsai~~a~ 259 (310)
+||+|+.++
T Consensus 239 vGs~f~~t~ 247 (366)
T 4fo4_A 239 VGSMFAGTE 247 (366)
T ss_dssp ESTTTTTBT
T ss_pred EChHhhcCC
Confidence 999999865
No 35
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.55 E-value=2.9e-13 Score=128.13 Aligned_cols=210 Identities=18% Similarity=0.158 Sum_probs=139.8
Q ss_pred ecchhhhhhCcccccCCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccC----
Q 021575 27 KVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIG---- 102 (310)
Q Consensus 27 ~~~~~~~~~~g~i~~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~---- 102 (310)
++|+++ .++...++++++|.++.++|+.+++.....+. ....+.++++++.++.|+.++....
T Consensus 10 ~~Pii~---apMaggvs~~~la~av~~aGglG~i~~~~~s~----------~~l~~~i~~~~~~~~~p~gVnl~~~~~~~ 76 (369)
T 3bw2_A 10 PLPIVQ---APMAGGVSVPQLAAAVCEAGGLGFLAAGYKTA----------DGMYQEIKRLRGLTGRPFGVNVFMPQPEL 76 (369)
T ss_dssp SSSEEE---CCCTTTTSCHHHHHHHHHTTSBEEEECTTSCH----------HHHHHHHHHHHHHCCSCEEEEEECCCCCC
T ss_pred cCCEEe---CCCCCCCCcHHHHHHHHHCCCEEEcCCCCCCH----------HHHHHHHHHHHHhCCCCeEEEEecCCCCc
Confidence 789888 44433699999999999999888743310000 0002345555665666666653221
Q ss_pred ----------------------------------cHHHHHHHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCC
Q 021575 103 ----------------------------------HFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRN 148 (310)
Q Consensus 103 ----------------------------------~~~~a~~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t 148 (310)
..+.++.+.+.|+|.|..+...+..+..+.++. .+++++++++|
T Consensus 77 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~g~~~~~~i~~~~~--~g~~v~~~v~t 154 (369)
T 3bw2_A 77 AESGAVEVYAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVPVVSFHFGVPDREVIARLRR--AGTLTLVTATT 154 (369)
T ss_dssp ---CHHHHHHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCSEEEEESSCCCHHHHHHHHH--TTCEEEEEESS
T ss_pred ccHHHHHHHHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCCEEEEeCCCCcHHHHHHHHH--CCCeEEEECCC
Confidence 134568888999999964443334556666654 46788899999
Q ss_pred HHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhcc-CCcHHHHHHHhhcCCCCEEEe
Q 021575 149 LGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKI-AAPYDLVMQTKQLGRLPVVHF 227 (310)
Q Consensus 149 ~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~-~~~~~~i~~i~~~~~iPVi~i 227 (310)
.++++++.+.|+|+|.+.++..+++. .+..++ . ..... ...+++++++++..++||+
T Consensus 155 ~~~a~~a~~~GaD~i~v~g~~~GGh~-----------------g~~~~~-~--~~~~~~~~~~~~l~~i~~~~~iPVi-- 212 (369)
T 3bw2_A 155 PEEARAVEAAGADAVIAQGVEAGGHQ-----------------GTHRDS-S--EDDGAGIGLLSLLAQVREAVDIPVV-- 212 (369)
T ss_dssp HHHHHHHHHTTCSEEEEECTTCSEEC-----------------CCSSCC-G--GGTTCCCCHHHHHHHHHHHCSSCEE--
T ss_pred HHHHHHHHHcCCCEEEEeCCCcCCcC-----------------CCcccc-c--ccccccccHHHHHHHHHHhcCceEE--
Confidence 99999999999999999765432220 000000 0 00000 1237788888877789998
Q ss_pred CCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhc
Q 021575 228 AAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTH 274 (310)
Q Consensus 228 A~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~ 274 (310)
+.|||.+++++.+++.+|||+|++||+++.++++.. .+.+++.+..
T Consensus 213 aaGGI~~~~~~~~~l~~GAd~V~vGs~~~~~~e~~~-~~~~k~~i~~ 258 (369)
T 3bw2_A 213 AAGGIMRGGQIAAVLAAGADAAQLGTAFLATDESGA-PGPHKRALTD 258 (369)
T ss_dssp EESSCCSHHHHHHHHHTTCSEEEESHHHHTSTTCCC-CHHHHHHTTC
T ss_pred EECCCCCHHHHHHHHHcCCCEEEEChHHhCCcccCc-cHHHHHHHHh
Confidence 679999999999999999999999999999776532 2345554443
No 36
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=99.55 E-value=5.4e-14 Score=127.50 Aligned_cols=181 Identities=19% Similarity=0.141 Sum_probs=124.5
Q ss_pred HHHHHHHHHcCCcEEEecc-----CC---ccccccc-----CCCCCCCCHHHHHHHHhh-cCcceeecccc------CcH
Q 021575 45 PEQARVAEEAGACAVMALE-----RV---PADIRSQ-----GGVARMSDPQLIKEIKQS-VTIPVMAKARI------GHF 104 (310)
Q Consensus 45 ~~~A~~~~~~Ga~~i~~L~-----~~---~~~~~~~-----~G~~~~~~~~~i~~i~~~-~~iPv~vk~~~------~~~ 104 (310)
.+.++.++++|||.| +|. |. |..+++. +|.+....++.++++|+. .++|+++.... +..
T Consensus 37 ~~~~~~l~~~GaD~i-ElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~ 115 (271)
T 3nav_A 37 LAIMQTLIDAGADAL-ELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYARGID 115 (271)
T ss_dssp HHHHHHHHHTTCSSE-EEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHH
T ss_pred HHHHHHHHHcCCCEE-EECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHH
Confidence 367889999999987 654 21 2222211 244333456888999887 79999886433 335
Q ss_pred HHHHHHHHcCCCEEEeCCCC--CchhHHHHHHhcCCCCcEEEecC-CHHHHHHHHHhCCCEEEEcCC-CCCcchHHHHHH
Q 021575 105 VEAQILEAIGIDYVDESEVL--TPADEENHINKHNFRIPFVCGCR-NLGEALRRIREGAAMIRTKGE-AGTGNIIEAVRH 180 (310)
Q Consensus 105 ~~a~~~~~aGad~Vi~~~~~--~~~~~~~~i~~~~~~i~~~v~~~-t~~ea~~~~~~Gad~V~v~g~-~~~~~~~~~~~~ 180 (310)
.+++.+.++|+|+++.++.. +..++.+.+++++.....++..+ +.+.+.+..+.+.++|.+-.. +.||.-
T Consensus 116 ~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY~vs~~GvTG~~------ 189 (271)
T 3nav_A 116 DFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYLLSRAGVTGAE------ 189 (271)
T ss_dssp HHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEEECCCC------------
T ss_pred HHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEEEEeccCCCCcc------
Confidence 67899999999999877642 34456666666776655555544 456666777888888875332 223310
Q ss_pred HHhhccceEeecccChhHHHHhhhccC-CcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 021575 181 VRSVMGDIRVLRNMDDDEVFTFAKKIA-APYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 181 ~r~~~~~~~~l~~~~~d~~~~~~~~~~-~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~ 257 (310)
.... ...++++++++..++|++ .++||++++++.+.+..|||||+|||+|++
T Consensus 190 -----------------------~~~~~~~~~~v~~vr~~~~~Pv~--vGfGIst~e~~~~~~~~gADgvIVGSAiv~ 242 (271)
T 3nav_A 190 -----------------------TKANMPVHALLERLQQFDAPPAL--LGFGISEPAQVKQAIEAGAAGAISGSAVVK 242 (271)
T ss_dssp -------------------------CCHHHHHHHHHHHHTTCCCEE--ECSSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred -----------------------cCCchhHHHHHHHHHHhcCCCEE--EECCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 0011 125678888888889998 689999999999889999999999999996
No 37
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.53 E-value=3e-13 Score=128.86 Aligned_cols=206 Identities=15% Similarity=0.151 Sum_probs=123.7
Q ss_pred CcceeecchhhhhhCcccccCCCHHHHHHHHHcCCcEEEeccCCccccc-------ccC-CC---------CCC---CCH
Q 021575 22 SPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIR-------SQG-GV---------ARM---SDP 81 (310)
Q Consensus 22 ~~~~~~~~~~~~~~~g~i~~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~-------~~~-G~---------~~~---~~~ 81 (310)
..++++.|+++ +.|..++++++|.++.++|.-+++.-+..+...+ ... |. ++. .++
T Consensus 37 ~~l~l~~PIi~----a~M~~Vs~~~lA~Ava~aGGlGvi~~~~~~e~~~~~i~~vk~~~~g~~~~P~~~~~nL~~~~~~~ 112 (400)
T 3ffs_A 37 KNVSLKIPLIS----SAMDTVTEHLMAVGMARLGGIGIIHKNMDMESQVNEVLKVKNWISNLEKNESTPDQNLDKESTDG 112 (400)
T ss_dssp SSCEESSSEEE----CSCTTTCSSHHHHHHHTTTCEEEECSSSCHHHHHHHHHHHHCCC---------------------
T ss_pred cccCCCCCEEe----CCCCCcCcHHHHHHHHHCCCEEEeCCCCCHHHHHHHHHHHHhhccCcccCCCCccccccCCCCCH
Confidence 56889999999 6677899999999999999988765331111110 000 00 000 000
Q ss_pred HHHHHHHhhcCcceeecc-----------ccCcHHHHHHHHHcCCCEEEe--CCCCCch---hHHHHHHhcCCCCcEEE-
Q 021575 82 QLIKEIKQSVTIPVMAKA-----------RIGHFVEAQILEAIGIDYVDE--SEVLTPA---DEENHINKHNFRIPFVC- 144 (310)
Q Consensus 82 ~~i~~i~~~~~iPv~vk~-----------~~~~~~~a~~~~~aGad~Vi~--~~~~~~~---~~~~~i~~~~~~i~~~v- 144 (310)
+.++.+.+....|...++ .....+.++.+.++|+|.|+. +.. .+. +..+.+++. +++++++
T Consensus 113 ~~~~~~~~~~~~p~~~~d~~g~l~v~~~v~~~~~e~~~~lveaGvdvIvldta~G-~~~~~~e~I~~ik~~-~~i~Vi~g 190 (400)
T 3ffs_A 113 KDTKSNNNIDAYSNENLDNKGRLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAHG-HSLNIIRTLKEIKSK-MNIDVIVG 190 (400)
T ss_dssp ----------CCTTCCBCTTSSBCCEEEECCC-CHHHHHHHHHTCSEEEECCSCC-SBHHHHHHHHHHHTT-CCCEEEEE
T ss_pred HHHHHHHHhhhCcchhhccccceeEEeecCCCHHHHHHHHHHcCCCEEEEeCCCC-CcccHHHHHHHHHhc-CCCeEEEe
Confidence 011222111112211111 111247889999999999963 333 233 344444432 3777775
Q ss_pred ecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc---CC
Q 021575 145 GCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL---GR 221 (310)
Q Consensus 145 ~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~---~~ 221 (310)
.+.|.++++++.++|+|+|.++ .+. ++++.. +.+.. ...+.+..+.++.+. .+
T Consensus 191 ~V~t~e~A~~a~~aGAD~I~vG-~g~-Gs~~~t-----------r~~~g-----------~g~p~~~al~~v~~~~~~~~ 246 (400)
T 3ffs_A 191 NVVTEEATKELIENGADGIKVG-IGP-GSICTT-----------RIVAG-----------VGVPQITAIEKCSSVASKFG 246 (400)
T ss_dssp EECSHHHHHHHHHTTCSEEEEC-C---------------------CCSC-----------BCCCHHHHHHHHHHHHTTTT
T ss_pred ecCCHHHHHHHHHcCCCEEEEe-CCC-CcCccc-----------ccccc-----------cchhHHHHHHHHHHHHHhcC
Confidence 7899999999999999999984 221 121100 01000 012345666666542 57
Q ss_pred CCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 021575 222 LPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 222 iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~ 259 (310)
+||| |+|||.+++|+.+++.+|||+|++||+|+.++
T Consensus 247 IPVI--A~GGI~~~~di~kalalGAd~V~vGt~f~~t~ 282 (400)
T 3ffs_A 247 IPII--ADGGIRYSGDIGKALAVGASSVMIGSILAGTE 282 (400)
T ss_dssp CCEE--EESCCCSHHHHHHHHTTTCSEEEECGGGTTBT
T ss_pred CCEE--ecCCCCCHHHHHHHHHcCCCEEEEChHHhcCC
Confidence 9998 88999999999999999999999999999865
No 38
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.53 E-value=7.8e-14 Score=138.67 Aligned_cols=203 Identities=15% Similarity=0.191 Sum_probs=119.8
Q ss_pred HHHHHHHHcCCcEE--EeccCCcccccccCCC-CCCCCHHHHHHHHhhcCcceeeccccCcH-----------HHHHHHH
Q 021575 46 EQARVAEEAGACAV--MALERVPADIRSQGGV-ARMSDPQLIKEIKQSVTIPVMAKARIGHF-----------VEAQILE 111 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i--~~L~~~~~~~~~~~G~-~~~~~~~~i~~i~~~~~iPv~vk~~~~~~-----------~~a~~~~ 111 (310)
++|++|.+.||+++ ++|+.. ..|. ....+.+.++++++.+++|+++...+... +.++.+.
T Consensus 284 ~~A~~~~~~Ga~~l~~~dl~~~------~~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l 357 (555)
T 1jvn_A 284 QLAQKYYQQGADEVTFLNITSF------RDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYF 357 (555)
T ss_dssp HHHHHHHHTTCSEEEEEEEC---------CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEeCCcc------ccccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHH
Confidence 78999999999998 455321 0110 01223678899988899999987666543 5699999
Q ss_pred HcCCCEEE-eCCCC-------------CchhHHHHHHh-cCCC-CcEEEecCCH-----HHH----HHHH---HhCC---
Q 021575 112 AIGIDYVD-ESEVL-------------TPADEENHINK-HNFR-IPFVCGCRNL-----GEA----LRRI---REGA--- 160 (310)
Q Consensus 112 ~aGad~Vi-~~~~~-------------~~~~~~~~i~~-~~~~-i~~~v~~~t~-----~ea----~~~~---~~Ga--- 160 (310)
++|||.|+ .+..+ ...++.+.+.+ ++.. +.+.+|++.. ... .... ..|-
T Consensus 358 ~aGad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 437 (555)
T 1jvn_A 358 RSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYC 437 (555)
T ss_dssp HHTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSCCTTCCCEE
T ss_pred HcCCCEEEECCHHhhCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEccccccccccccccccccccccCCCCCcce
Confidence 99999995 33322 12344444433 4322 5556665310 000 0000 0010
Q ss_pred -CEEEEcCCCCCcchHHHHHHHHhhccc---eEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHH
Q 021575 161 -AMIRTKGEAGTGNIIEAVRHVRSVMGD---IRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPA 236 (310)
Q Consensus 161 -d~V~v~g~~~~~~~~~~~~~~r~~~~~---~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~ 236 (310)
..|.++||..... .++.++.++.... .-+++..++|++ ..++++++++++++.+++||| |+|||++++
T Consensus 438 ~~~v~~~Gw~~~~~-~~~~e~a~~~~~~Ga~~il~t~~~~dG~-----~~G~d~~li~~l~~~~~iPVI--asGGi~s~~ 509 (555)
T 1jvn_A 438 WYQCTIKGGRESRD-LGVWELTRACEALGAGEILLNCIDKDGS-----NSGYDLELIEHVKDAVKIPVI--ASSGAGVPE 509 (555)
T ss_dssp EEEEEETTTTEEEE-EEHHHHHHHHHHTTCCEEEECCGGGTTT-----CSCCCHHHHHHHHHHCSSCEE--ECSCCCSHH
T ss_pred eEEEEEecCccCCC-CCHHHHHHHHHHcCCCEEEEeCCCCCCC-----CCCCCHHHHHHHHHhCCccEE--EECCCCCHH
Confidence 1233444421100 0122222222111 222233333332 135679999999998899998 899999999
Q ss_pred HHHHHHH-cCCCEEEEccccccCCCHH
Q 021575 237 DAAMMMQ-LGCDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 237 d~~~~l~-~GadgV~VGsai~~a~dp~ 262 (310)
|+.++++ +||++|++||+|+..+...
T Consensus 510 d~~~~~~~~G~~gvivg~a~~~~~~~~ 536 (555)
T 1jvn_A 510 HFEEAFLKTRADACLGAGMFHRGEFTV 536 (555)
T ss_dssp HHHHHHHHSCCSEEEESHHHHTTSCCH
T ss_pred HHHHHHHhcCChHHHHHHHHHcCCCCH
Confidence 9999997 8999999999999854433
No 39
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=99.52 E-value=4e-13 Score=118.22 Aligned_cols=182 Identities=17% Similarity=0.244 Sum_probs=122.5
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCC-----CCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEEe
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARM-----SDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDE 120 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~-----~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi~ 120 (310)
+.++.+.++|++++ ++. ...++... ...+.++++.+.+++|++++. .++.+.++|+|+|..
T Consensus 35 ~~~~~~~~~G~~~i-~l~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~v~v~v~~------~~~~a~~~gad~v~l 100 (227)
T 2tps_A 35 TVVQKALKGGATLY-QFR-------EKGGDALTGEARIKFAEKAQAACREAGVPFIVND------DVELALNLKADGIHI 100 (227)
T ss_dssp HHHHHHHHHTCSEE-EEC-------CCSTTCCCHHHHHHHHHHHHHHHHHHTCCEEEES------CHHHHHHHTCSEEEE
T ss_pred HHHHHHHHCCCCEE-EEe-------cCCCCHhHHHHHHHHHHHHHHHHHHcCCeEEEcC------HHHHHHHcCCCEEEE
Confidence 67889999999987 653 11111100 012233344445678888753 346788899999964
Q ss_pred C-CCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHH
Q 021575 121 S-EVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEV 199 (310)
Q Consensus 121 ~-~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~ 199 (310)
. ...+ +.+..+..+. +.+.++++|.+++.++.+.|+|++.+..-..++. ..+
T Consensus 101 ~~~~~~---~~~~~~~~g~-~~~~~s~~t~~e~~~a~~~g~d~v~~~~v~~t~~----------------------~~~- 153 (227)
T 2tps_A 101 GQEDAN---AKEVRAAIGD-MILGVSAHTMSEVKQAEEDGADYVGLGPIYPTET----------------------KKD- 153 (227)
T ss_dssp CTTSSC---HHHHHHHHTT-SEEEEEECSHHHHHHHHHHTCSEEEECCSSCCCS----------------------SSS-
T ss_pred CCCccC---HHHHHHhcCC-cEEEEecCCHHHHHHHHhCCCCEEEECCCcCCCC----------------------CCC-
Confidence 3 2222 3222222344 6677788999999888899999998632111110 000
Q ss_pred HHhhhccCCcHHHHHHHhhcCC-CCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhcc
Q 021575 200 FTFAKKIAAPYDLVMQTKQLGR-LPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHY 275 (310)
Q Consensus 200 ~~~~~~~~~~~~~i~~i~~~~~-iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~ 275 (310)
......++.++++++..+ +|++ +.|||+ ++|+.+++++|+|+|.+||++++++||...+++|++.++.+
T Consensus 154 ----~~~~~~~~~l~~~~~~~~~~pvi--a~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~~ 223 (227)
T 2tps_A 154 ----TRAVQGVSLIEAVRRQGISIPIV--GIGGIT-IDNAAPVIQAGADGVSMISAISQAEDPESAARKFREEIQTY 223 (227)
T ss_dssp ----CCCCCTTHHHHHHHHTTCCCCEE--EESSCC-TTTSHHHHHTTCSEEEESHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred ----CCCccCHHHHHHHHHhCCCCCEE--EEcCCC-HHHHHHHHHcCCCEEEEhHHhhcCCCHHHHHHHHHHHHHhc
Confidence 001223677888877666 9998 679996 99999999999999999999999999988888898887643
No 40
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=99.52 E-value=2.6e-13 Score=118.22 Aligned_cols=179 Identities=20% Similarity=0.223 Sum_probs=123.7
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHH---hhcCcceeeccccCcHHHHHHHHHcCCCEEEeC-
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIK---QSVTIPVMAKARIGHFVEAQILEAIGIDYVDES- 121 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~---~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi~~- 121 (310)
+.++.+.++|++++ ++. ....+ .....+.+++++ ...++|++++. .++.+.++|+|+|...
T Consensus 30 ~~~~~~~~~G~~~i-~l~-------~~~~~-~~~~~~~~~~l~~~~~~~~v~v~v~~------~~~~a~~~gad~v~l~~ 94 (215)
T 1xi3_A 30 ESVREALEGGATAI-QMR-------IKNAP-TREMYEIGKTLRQLTREYDALFFVDD------RVDVALAVDADGVQLGP 94 (215)
T ss_dssp HHHHHHHHTTCSEE-EEC-------CCSCC-HHHHHHHHHHHHHHHHHTTCEEEEES------CHHHHHHHTCSEEEECT
T ss_pred HHHHHHHHCCCCEE-EEC-------CCCCC-HHHHHHHHHHHHHHHHHcCCeEEEcC------hHHHHHHcCCCEEEECC
Confidence 78999999999987 653 10000 000033444443 34578888753 3467889999999643
Q ss_pred CCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHH
Q 021575 122 EVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFT 201 (310)
Q Consensus 122 ~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~ 201 (310)
...+...+.+. . .++.+.++++|.+++.++.+.|+|++.+++...++. ..
T Consensus 95 ~~~~~~~~~~~---~-~~~~~~v~~~t~~e~~~~~~~g~d~i~~~~~~~~~~----------------------~~---- 144 (215)
T 1xi3_A 95 EDMPIEVAKEI---A-PNLIIGASVYSLEEALEAEKKGADYLGAGSVFPTKT----------------------KE---- 144 (215)
T ss_dssp TSCCHHHHHHH---C-TTSEEEEEESSHHHHHHHHHHTCSEEEEECSSCC------------------------------
T ss_pred ccCCHHHHHHh---C-CCCEEEEecCCHHHHHHHHhcCCCEEEEcCCccCCC----------------------CC----
Confidence 33443333222 2 467788889999999888899999998864211110 00
Q ss_pred hhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhc
Q 021575 202 FAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTH 274 (310)
Q Consensus 202 ~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~ 274 (310)
......++.++++++..++|++ +.|||+ ++++.+++++|+|+|.+||++++++||...+++|++.++.
T Consensus 145 --~~~~~~~~~l~~l~~~~~~pvi--a~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~ 212 (215)
T 1xi3_A 145 --DARVIGLEGLRKIVESVKIPVV--AIGGIN-KDNAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIVEE 212 (215)
T ss_dssp --CCCCCHHHHHHHHHHHCSSCEE--EESSCC-TTTHHHHHTTTCSEEEESHHHHTSSSHHHHHHHHHHHHHH
T ss_pred --CCCCcCHHHHHHHHHhCCCCEE--EECCcC-HHHHHHHHHcCCCEEEEhHHHhCCCCHHHHHHHHHHHHhh
Confidence 0012346777777766789998 679996 9999999999999999999999999998888888887753
No 41
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=99.51 E-value=3.3e-14 Score=126.26 Aligned_cols=189 Identities=14% Similarity=0.122 Sum_probs=124.8
Q ss_pred HHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccC-cHHHHHHHHHcCCCEEEeC-C
Q 021575 45 PEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIG-HFVEAQILEAIGIDYVDES-E 122 (310)
Q Consensus 45 ~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~-~~~~a~~~~~aGad~Vi~~-~ 122 (310)
.+.++.+.++|++++ +++-. + ..+- .+...-++.++++++.++.|+.+...+. ....++.+.++|||+|+.. .
T Consensus 20 ~~~i~~~~~~Gad~i-hldi~--D-G~fv-p~~~~g~~~v~~lr~~~~~~~~vhlmv~dp~~~i~~~~~aGadgv~vh~e 94 (230)
T 1tqj_A 20 GEEIKAVDEAGADWI-HVDVM--D-GRFV-PNITIGPLIVDAIRPLTKKTLDVHLMIVEPEKYVEDFAKAGADIISVHVE 94 (230)
T ss_dssp HHHHHHHHHTTCSEE-EEEEE--B-SSSS-SCBCBCHHHHHHHGGGCCSEEEEEEESSSGGGTHHHHHHHTCSEEEEECS
T ss_pred HHHHHHHHHcCCCEE-EEEEE--e-cCCC-cchhhhHHHHHHHHhhcCCcEEEEEEccCHHHHHHHHHHcCCCEEEECcc
Confidence 377888899999987 55300 0 0000 0011126899999988888887655443 2345788999999999633 2
Q ss_pred --C-CCchhHHHHHHhcCCCCcEEEec--CCHHHHHHHHHhCCCEEEEcCCCC--CcchHHHHHHHHhhccceEeecccC
Q 021575 123 --V-LTPADEENHINKHNFRIPFVCGC--RNLGEALRRIREGAAMIRTKGEAG--TGNIIEAVRHVRSVMGDIRVLRNMD 195 (310)
Q Consensus 123 --~-~~~~~~~~~i~~~~~~i~~~v~~--~t~~ea~~~~~~Gad~V~v~g~~~--~~~~~~~~~~~r~~~~~~~~l~~~~ 195 (310)
. ..+.+..+.+++ .++.+++++ +|..+..+....++|+|.+..... ++.
T Consensus 95 ~~~~~~~~~~~~~i~~--~g~~~gv~~~p~t~~e~~~~~~~~~D~v~~msv~pg~ggq---------------------- 150 (230)
T 1tqj_A 95 HNASPHLHRTLCQIRE--LGKKAGAVLNPSTPLDFLEYVLPVCDLILIMSVNPGFGGQ---------------------- 150 (230)
T ss_dssp TTTCTTHHHHHHHHHH--TTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCC----C----------------------
T ss_pred cccchhHHHHHHHHHH--cCCcEEEEEeCCCcHHHHHHHHhcCCEEEEEEeccccCCc----------------------
Confidence 2 234455555543 566666665 777777766667999987654211 110
Q ss_pred hhHHHHhhhccCCcHHHHHHHhhcC-----CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHH
Q 021575 196 DDEVFTFAKKIAAPYDLVMQTKQLG-----RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVR 270 (310)
Q Consensus 196 ~d~~~~~~~~~~~~~~~i~~i~~~~-----~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~ 270 (310)
+-.....+.++++++.. ++|+. +.|||+ .+++.++.++|||++++||+|++++||...+++|++
T Consensus 151 --------~~~~~~~~~i~~lr~~~~~~~~~~~I~--v~GGI~-~~~~~~~~~aGad~vvvGSai~~a~d~~~~~~~l~~ 219 (230)
T 1tqj_A 151 --------SFIPEVLPKIRALRQMCDERGLDPWIE--VDGGLK-PNNTWQVLEAGANAIVAGSAVFNAPNYAEAIAGVRN 219 (230)
T ss_dssp --------CCCGGGHHHHHHHHHHHHHHTCCCEEE--EESSCC-TTTTHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHT
T ss_pred --------cCcHHHHHHHHHHHHHHHhcCCCCcEE--EECCcC-HHHHHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHH
Confidence 00112255566666544 78998 469995 699999999999999999999999999988888865
Q ss_pred HHh
Q 021575 271 AVT 273 (310)
Q Consensus 271 ~i~ 273 (310)
.++
T Consensus 220 ~~~ 222 (230)
T 1tqj_A 220 SKR 222 (230)
T ss_dssp CCC
T ss_pred HHH
Confidence 443
No 42
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=99.51 E-value=6.4e-13 Score=116.09 Aligned_cols=169 Identities=14% Similarity=0.128 Sum_probs=120.6
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEEeCCCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLT 125 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi~~~~~~ 125 (310)
+.++++.++|++.+ ++. ... ....+.++++++ -++.+..+..+ ..++++.+.++|||+++.+. .
T Consensus 29 ~~~~~l~~gGv~~i-el~-------~k~----~~~~~~i~~~~~-~~~~~gag~vl-~~d~~~~A~~~GAd~v~~~~--~ 92 (207)
T 2yw3_A 29 GLARVLEEEGVGAL-EIT-------LRT----EKGLEALKALRK-SGLLLGAGTVR-SPKEAEAALEAGAAFLVSPG--L 92 (207)
T ss_dssp HHHHHHHHTTCCEE-EEE-------CSS----THHHHHHHHHTT-SSCEEEEESCC-SHHHHHHHHHHTCSEEEESS--C
T ss_pred HHHHHHHHcCCCEE-EEe-------CCC----hHHHHHHHHHhC-CCCEEEeCeEe-eHHHHHHHHHcCCCEEEcCC--C
Confidence 68899999999976 762 111 011456666666 55555555533 45889999999999997543 2
Q ss_pred chhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhc
Q 021575 126 PADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKK 205 (310)
Q Consensus 126 ~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~ 205 (310)
..++.+..+. .+++.+++++|.+|+.++.+.|+|||++++....
T Consensus 93 d~~v~~~~~~--~g~~~i~G~~t~~e~~~A~~~Gad~v~~fpa~~~---------------------------------- 136 (207)
T 2yw3_A 93 LEEVAALAQA--RGVPYLPGVLTPTEVERALALGLSALKFFPAEPF---------------------------------- 136 (207)
T ss_dssp CHHHHHHHHH--HTCCEEEEECSHHHHHHHHHTTCCEEEETTTTTT----------------------------------
T ss_pred CHHHHHHHHH--hCCCEEecCCCHHHHHHHHHCCCCEEEEecCccc----------------------------------
Confidence 3455555544 3566777899999999999999999999652110
Q ss_pred cCCcHHHHHHHhhcC-CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCC---HHHHHHHHHHHH
Q 021575 206 IAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGD---PVKRAQAIVRAV 272 (310)
Q Consensus 206 ~~~~~~~i~~i~~~~-~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~d---p~~~a~~l~~~i 272 (310)
...+.++.++... ++|++ +.||| +++++.+++++|+++|.+||+|+. +| +...++++++.+
T Consensus 137 --gG~~~lk~l~~~~~~ipvv--aiGGI-~~~n~~~~l~aGa~~vavgSai~~-~d~~~i~~~a~~~~~~~ 201 (207)
T 2yw3_A 137 --QGVRVLRAYAEVFPEVRFL--PTGGI-KEEHLPHYAALPNLLAVGGSWLLQ-GNLEAVRAKVRAAKALL 201 (207)
T ss_dssp --THHHHHHHHHHHCTTCEEE--EBSSC-CGGGHHHHHTCSSBSCEEESGGGS-SCHHHHHHHHHHHHHHC
T ss_pred --cCHHHHHHHHhhCCCCcEE--EeCCC-CHHHHHHHHhCCCcEEEEehhhhC-CCHHHHHHHHHHHHHHh
Confidence 0134566666654 79998 67999 589999999999999999999998 88 455555555443
No 43
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=99.51 E-value=1.2e-13 Score=122.85 Aligned_cols=169 Identities=22% Similarity=0.378 Sum_probs=124.1
Q ss_pred HHHHHHcCCCEEEe----CCC---CCchhHHHHHHhcCCC-CcEEEecCCHHHHHHHHHh------CCCEEEEc--CC--
Q 021575 107 AQILEAIGIDYVDE----SEV---LTPADEENHINKHNFR-IPFVCGCRNLGEALRRIRE------GAAMIRTK--GE-- 168 (310)
Q Consensus 107 a~~~~~aGad~Vi~----~~~---~~~~~~~~~i~~~~~~-i~~~v~~~t~~ea~~~~~~------Gad~V~v~--g~-- 168 (310)
.+.+.++|++.|.. .+. -....+.+.+...++. ++++.+|+|.+||.+.+++ |.++|++- +.
T Consensus 36 ~~a~~asg~e~vtva~rR~~~~~~~~~~~~~~~i~~~~~~~lpNTag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~ 115 (265)
T 1wv2_A 36 RRAIEASGAEIVTVAVRRTNIGQNPDEPNLLDVIPPDRYTILPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQK 115 (265)
T ss_dssp HHHHHHSCCSEEEEEGGGCCC-------------CTTTSEEEEECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTT
T ss_pred HHHHHHhCCCeEEEEEEeeccccCCCcchHHhhhhhcCCEECCcCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCcc
Confidence 45667788888841 121 1234566667544555 7889999999999886542 66788854 32
Q ss_pred CCCcchHHHHHHHHhhccc-eEeecccChhHHHHhh-------------h--cc---CCcHHHHHHHhhcCCCCEEEeCC
Q 021575 169 AGTGNIIEAVRHVRSVMGD-IRVLRNMDDDEVFTFA-------------K--KI---AAPYDLVMQTKQLGRLPVVHFAA 229 (310)
Q Consensus 169 ~~~~~~~~~~~~~r~~~~~-~~~l~~~~~d~~~~~~-------------~--~~---~~~~~~i~~i~~~~~iPVi~iA~ 229 (310)
...+++..++++.+.+... +.+++++.+|..+... . +. ..++++++.+++..++||| +.
T Consensus 116 ~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vPVI--~e 193 (265)
T 1wv2_A 116 TLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVPVL--VD 193 (265)
T ss_dssp TCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHHCSSCBE--EE
T ss_pred ccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHhcCCCCEE--Ee
Confidence 2356788899999998777 9999988888776320 0 01 1357889999988899998 68
Q ss_pred CCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhccCC
Q 021575 230 GGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHYSD 277 (310)
Q Consensus 230 GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~~~ 277 (310)
|||.+++|+.+++++|||||+|||+|++++||...+++|+++++.++.
T Consensus 194 GGI~TPsDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~af~~Av~aGr~ 241 (265)
T 1wv2_A 194 AGVGTASDAAIAMELGCEAVLMNTAIAHAKDPVMMAEAMKHAIVAGRL 241 (265)
T ss_dssp SCCCSHHHHHHHHHHTCSEEEESHHHHTSSSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999986544
No 44
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=99.50 E-value=4.7e-13 Score=118.49 Aligned_cols=188 Identities=13% Similarity=0.114 Sum_probs=126.2
Q ss_pred HHHHHHHHHcCCcEEEeccCCcccccccCCC---CCCCCHHHHHHHHhhcCcceeeccccC-cHHHHHHHHHcCCCEEEe
Q 021575 45 PEQARVAEEAGACAVMALERVPADIRSQGGV---ARMSDPQLIKEIKQSVTIPVMAKARIG-HFVEAQILEAIGIDYVDE 120 (310)
Q Consensus 45 ~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~---~~~~~~~~i~~i~~~~~iPv~vk~~~~-~~~~a~~~~~aGad~Vi~ 120 (310)
.+.++.+.++|++++ +++ +.. |. .....++.++++++.++.|+.+...+. ..+.++.+.++|+|+|..
T Consensus 22 ~~~i~~~~~~Gad~i-~l~-----i~D--g~fv~~~~~~~~~~~~lr~~~~~~~~v~lmv~d~~~~i~~~~~agad~v~v 93 (228)
T 1h1y_A 22 AAEADRMVRLGADWL-HMD-----IMD--GHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTF 93 (228)
T ss_dssp HHHHHHHHHTTCSEE-EEE-----EEB--SSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSCGGGGHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEE-EEE-----Eec--CCcCcchhhCHHHHHHHHhhcCCcEEEEEEecCHHHHHHHHHHcCCCEEEE
Confidence 377888899999987 553 000 00 001126899999988777777655543 234578888899999953
Q ss_pred CC--CCCc-hhHHHHHHhcCCCCcEEEec--CCHHHHHHHHHh---CCCEEEEcCCC--CCcchHHHHHHHHhhccceEe
Q 021575 121 SE--VLTP-ADEENHINKHNFRIPFVCGC--RNLGEALRRIRE---GAAMIRTKGEA--GTGNIIEAVRHVRSVMGDIRV 190 (310)
Q Consensus 121 ~~--~~~~-~~~~~~i~~~~~~i~~~v~~--~t~~ea~~~~~~---Gad~V~v~g~~--~~~~~~~~~~~~r~~~~~~~~ 190 (310)
+. ...+ .+..+.+++. ++.+++.+ +|..+..+.... ++|+|.+.... +++.
T Consensus 94 H~~~~~~~~~~~~~~i~~~--g~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~----------------- 154 (228)
T 1h1y_A 94 HIEVSRDNWQELIQSIKAK--GMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQ----------------- 154 (228)
T ss_dssp EGGGCTTTHHHHHHHHHHT--TCEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSC-----------------
T ss_pred CCCCcccHHHHHHHHHHHc--CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCcc-----------------
Confidence 32 2234 4555555543 55555655 565555555544 99999875422 1111
Q ss_pred ecccChhHHHHhhhccCCcHHHHHHHhhcC-CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHH
Q 021575 191 LRNMDDDEVFTFAKKIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIV 269 (310)
Q Consensus 191 l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~-~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~ 269 (310)
. -....++.++++++.. ++|+. +.|||+ ++++.++.++|+|++++||+|++++||...+++|+
T Consensus 155 --~-----------~~~~~l~~i~~~~~~~~~~pi~--v~GGI~-~~ni~~~~~aGaD~vvvGsai~~~~d~~~~~~~l~ 218 (228)
T 1h1y_A 155 --K-----------FMPEMMEKVRALRKKYPSLDIE--VDGGLG-PSTIDVAASAGANCIVAGSSIFGAAEPGEVISALR 218 (228)
T ss_dssp --C-----------CCGGGHHHHHHHHHHCTTSEEE--EESSCS-TTTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHH
T ss_pred --c-----------CCHHHHHHHHHHHHhcCCCCEE--EECCcC-HHHHHHHHHcCCCEEEECHHHHCCCCHHHHHHHHH
Confidence 0 0112355566777665 78998 469995 79999999999999999999999999999999998
Q ss_pred HHHhcc
Q 021575 270 RAVTHY 275 (310)
Q Consensus 270 ~~i~~~ 275 (310)
+.++..
T Consensus 219 ~~~~~~ 224 (228)
T 1h1y_A 219 KSVEGS 224 (228)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 877643
No 45
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=99.49 E-value=7.7e-13 Score=116.28 Aligned_cols=180 Identities=19% Similarity=0.214 Sum_probs=120.7
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcc---eeeccccCcHHHHHHHHHcCCCEEEeCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIP---VMAKARIGHFVEAQILEAIGIDYVDESE 122 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iP---v~vk~~~~~~~~a~~~~~aGad~Vi~~~ 122 (310)
+.+..+.++|++++ +++ ...-+ .....+.++.+++.+ .+ ++++ +.++.+.++|+|+|....
T Consensus 33 ~~~~~~~~~G~~~v-~lr-------~~~~~-~~~~~~~~~~l~~~~-~~~~~l~v~------~~~~~a~~~gad~v~l~~ 96 (221)
T 1yad_A 33 ARIIITIQNEVDFI-HIR-------ERSKS-AADILKLLDLIFEGG-IDKRKLVMN------GRVDIALFSTIHRVQLPS 96 (221)
T ss_dssp HHHHHHHGGGCSEE-EEC-------CTTSC-HHHHHHHHHHHHHTT-CCGGGEEEE------SCHHHHHTTTCCEEEECT
T ss_pred HHHHHHHHCCCCEE-EEc-------cCCCC-HHHHHHHHHHHHHhc-CcCCeEEEe------ChHHHHHHcCCCEEEeCC
Confidence 44677788999976 663 11100 000134555555432 23 4433 345778899999996433
Q ss_pred -CCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHH
Q 021575 123 -VLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFT 201 (310)
Q Consensus 123 -~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~ 201 (310)
......+.+. . .++.++++++|.+++.++.+.|+|+|.+.+...+.. ..+
T Consensus 97 ~~~~~~~~~~~---~-~~~~ig~sv~t~~~~~~a~~~gaD~i~~~~~f~~~~----------------------~~g--- 147 (221)
T 1yad_A 97 GSFSPKQIRAR---F-PHLHIGRSVHSLEEAVQAEKEDADYVLFGHVFETDC----------------------KKG--- 147 (221)
T ss_dssp TSCCHHHHHHH---C-TTCEEEEEECSHHHHHHHHHTTCSEEEEECCC--------------------------------
T ss_pred CccCHHHHHHH---C-CCCEEEEEcCCHHHHHHHHhCCCCEEEECCccccCC----------------------CCC---
Confidence 3333333322 2 267888899999999999999999998854211110 000
Q ss_pred hhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhccC
Q 021575 202 FAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHYS 276 (310)
Q Consensus 202 ~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~~ 276 (310)
.....++.++++++..++|++ +.||| +++++.+++++|+++|.+||++++++||...+++|++.++...
T Consensus 148 ---~~~~~~~~l~~~~~~~~~pvi--a~GGI-~~~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~~~ 216 (221)
T 1yad_A 148 ---LEGRGVSLLSDIKQRISIPVI--AIGGM-TPDRLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKLKEMR 216 (221)
T ss_dssp ------CHHHHHHHHHHHCCSCEE--EESSC-CGGGHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHHHHC
T ss_pred ---CCCCCHHHHHHHHHhCCCCEE--EECCC-CHHHHHHHHHcCCCEEEEhHHhhCCCCHHHHHHHHHHHHHHhh
Confidence 012236777777766689998 67999 8999999999999999999999999999999999988886543
No 46
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.48 E-value=1.2e-13 Score=120.90 Aligned_cols=176 Identities=12% Similarity=0.135 Sum_probs=119.1
Q ss_pred HHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEE-eCCC
Q 021575 45 PEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVD-ESEV 123 (310)
Q Consensus 45 ~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi-~~~~ 123 (310)
.+.++.+.++|+++| ++. .+.-+ .....+.++++++.+++++++++. ++.+.++|+|+|. ...+
T Consensus 16 ~~~~~~a~~~Gv~~v-~lr-------~k~~~-~~~~~~~i~~l~~~~~~~livnd~------~~~A~~~gadgvhl~~~~ 80 (210)
T 3ceu_A 16 DKIITALFEEGLDIL-HLR-------KPETP-AMYSERLLTLIPEKYHRRIVTHEH------FYLKEEFNLMGIHLNARN 80 (210)
T ss_dssp HHHHHHHHHTTCCEE-EEC-------CSSCC-HHHHHHHHHHSCGGGGGGEEESSC------TTHHHHTTCSEEECCSSS
T ss_pred HHHHHHHHHCCCCEE-EEc-------cCCCC-HHHHHHHHHHHHHHhCCeEEEeCC------HHHHHHcCCCEEEECccc
Confidence 367888899999986 662 11100 000123455555667888887654 3578899999995 3333
Q ss_pred CCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhh
Q 021575 124 LTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFA 203 (310)
Q Consensus 124 ~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~ 203 (310)
.+... ..+..++++++|.+|+.++. .|+||+.+.+-..++ ++.+
T Consensus 81 ~~~~~--------~~~~~ig~s~~t~~e~~~A~-~GaDyv~~g~vf~t~----------------------sk~~----- 124 (210)
T 3ceu_A 81 PSEPH--------DYAGHVSCSCHSVEEVKNRK-HFYDYVFMSPIYDSI----------------------SKVN----- 124 (210)
T ss_dssp CSCCT--------TCCSEEEEEECSHHHHHTTG-GGSSEEEECCCC----------------------------------
T ss_pred ccccc--------ccCCEEEEecCCHHHHHHHh-hCCCEEEECCcCCCC----------------------CCCC-----
Confidence 32211 13678899999999999887 999999975421111 1100
Q ss_pred hccCCcHHHHHHHhhc--CCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhcc
Q 021575 204 KKIAAPYDLVMQTKQL--GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHY 275 (310)
Q Consensus 204 ~~~~~~~~~i~~i~~~--~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~ 275 (310)
......++.++++++. .++||+ +.||| +++++.+++++|++||.|+|+|++++||... ++|++.++.|
T Consensus 125 ~~~~~g~~~l~~~~~~~~~~iPvi--aiGGI-~~~nv~~~~~~Ga~gVav~s~i~~~~d~~~~-~~~~~~v~~~ 194 (210)
T 3ceu_A 125 YYSTYTAEELREAQKAKIIDSKVM--ALGGI-NEDNLLEIKDFGFGGAVVLGDLWNKFDACLD-QNYLAVIEHF 194 (210)
T ss_dssp --CCCCHHHHHHHHHTTCSSTTEE--EESSC-CTTTHHHHHHTTCSEEEESHHHHTTCCTTTS-SCCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHhcCCCCCEE--EECCC-CHHHHHHHHHhCCCEEEEhHHhHcCCCHHHH-HHHHHHHHHH
Confidence 0012246777887775 589999 56999 5999999999999999999999999999755 5566666544
No 47
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=99.48 E-value=2.7e-13 Score=118.83 Aligned_cols=186 Identities=13% Similarity=0.118 Sum_probs=122.3
Q ss_pred HHHHHHHHHcCCcEEEeccCCcccccccCCC-C--CCCCHHHHHHHHhhcCcceeeccccCc-HHHHHHHHHcCCCEEEe
Q 021575 45 PEQARVAEEAGACAVMALERVPADIRSQGGV-A--RMSDPQLIKEIKQSVTIPVMAKARIGH-FVEAQILEAIGIDYVDE 120 (310)
Q Consensus 45 ~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~-~--~~~~~~~i~~i~~~~~iPv~vk~~~~~-~~~a~~~~~aGad~Vi~ 120 (310)
.+.++.+.++|++++ ++. ...|+ . ....++.++++++.++.|+.+...+.+ .+.++.+.++|+|+|..
T Consensus 19 ~~~~~~~~~~G~~~i-~~~-------~~dg~~~~~~~~g~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~~~~gad~v~v 90 (220)
T 2fli_A 19 ASELARIEETDAEYV-HID-------IMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGADIMTI 90 (220)
T ss_dssp HHHHHHHHHTTCCEE-EEE-------EEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEE-EEE-------eecCCCCCccccCHHHHHHHHHhCCCCEEEEEeecCHHHHHHHHHHcCCCEEEE
Confidence 377888899999986 442 01111 0 111278999999888888888766553 23568999999999952
Q ss_pred C--CCCCchhHHHHHHhcCCCCcEEEec--CCHHHHHHHHHhCCCEEEEcC--CCCCcchHHHHHHHHhhccceEeeccc
Q 021575 121 S--EVLTPADEENHINKHNFRIPFVCGC--RNLGEALRRIREGAAMIRTKG--EAGTGNIIEAVRHVRSVMGDIRVLRNM 194 (310)
Q Consensus 121 ~--~~~~~~~~~~~i~~~~~~i~~~v~~--~t~~ea~~~~~~Gad~V~v~g--~~~~~~~~~~~~~~r~~~~~~~~l~~~ 194 (310)
+ ....+.+..+.+++. +..+++++ +|..+..+....++|+|.+.+ .++++. ..
T Consensus 91 h~~~~~~~~~~~~~~~~~--g~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~-------------------~~ 149 (220)
T 2fli_A 91 HTESTRHIHGALQKIKAA--GMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQ-------------------AF 149 (220)
T ss_dssp EGGGCSCHHHHHHHHHHT--TSEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSC-------------------CC
T ss_pred ccCccccHHHHHHHHHHc--CCcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCccc-------------------cc
Confidence 2 223345555666553 44555555 565565555556789885432 222221 00
Q ss_pred ChhHHHHhhhccCCcHHHHHHHhhcC-----CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHH
Q 021575 195 DDDEVFTFAKKIAAPYDLVMQTKQLG-----RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIV 269 (310)
Q Consensus 195 ~~d~~~~~~~~~~~~~~~i~~i~~~~-----~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~ 269 (310)
.....+.++.+++.. ++|++ +.|||+ ++++.++.++|+|+++|||+|++++||...+++|+
T Consensus 150 -----------~~~~~~~i~~~~~~~~~~~~~~~i~--v~GGI~-~~~~~~~~~~Gad~vvvGsai~~~~d~~~a~~~~~ 215 (220)
T 2fli_A 150 -----------IPECLEKVATVAKWRDEKGLSFDIE--VDGGVD-NKTIRACYEAGANVFVAGSYLFKASDLVSQVQTLR 215 (220)
T ss_dssp -----------CGGGHHHHHHHHHHHHHTTCCCEEE--EESSCC-TTTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHH
T ss_pred -----------CHHHHHHHHHHHHHHHhcCCCceEE--EECcCC-HHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHH
Confidence 011123334444322 68887 579996 99999999999999999999999999999999887
Q ss_pred HHHh
Q 021575 270 RAVT 273 (310)
Q Consensus 270 ~~i~ 273 (310)
+.++
T Consensus 216 ~~~~ 219 (220)
T 2fli_A 216 TALN 219 (220)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 7653
No 48
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=99.47 E-value=1e-12 Score=114.03 Aligned_cols=171 Identities=18% Similarity=0.195 Sum_probs=124.5
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhc--CcceeeccccCcHHHHHHHHHcCCCEEEeCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSV--TIPVMAKARIGHFVEAQILEAIGIDYVDESEV 123 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~--~iPv~vk~~~~~~~~a~~~~~aGad~Vi~~~~ 123 (310)
+.++.+.++|++.+ .+. .+... ..+.++++|+.+ +.++.+... ...++++.+.++|+|+++ ...
T Consensus 26 ~~~~~~~~~G~~~i-ev~-----~~~~~------~~~~i~~ir~~~~~~~~ig~~~v-~~~~~~~~a~~~Gad~iv-~~~ 91 (205)
T 1wa3_A 26 EKALAVFEGGVHLI-EIT-----FTVPD------ADTVIKELSFLKEKGAIIGAGTV-TSVEQCRKAVESGAEFIV-SPH 91 (205)
T ss_dssp HHHHHHHHTTCCEE-EEE-----TTSTT------HHHHHHHTHHHHHTTCEEEEESC-CSHHHHHHHHHHTCSEEE-CSS
T ss_pred HHHHHHHHCCCCEE-EEe-----CCChh------HHHHHHHHHHHCCCCcEEEeccc-CCHHHHHHHHHcCCCEEE-cCC
Confidence 46888889999987 331 01100 145678887765 455554332 234678889999999994 333
Q ss_pred CCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhh
Q 021575 124 LTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFA 203 (310)
Q Consensus 124 ~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~ 203 (310)
++ .++.+.+++ .+++++++++|.+++.++.++|+|++.+++.. .
T Consensus 92 ~~-~~~~~~~~~--~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~---~------------------------------ 135 (205)
T 1wa3_A 92 LD-EEISQFCKE--KGVFYMPGVMTPTELVKAMKLGHTILKLFPGE---V------------------------------ 135 (205)
T ss_dssp CC-HHHHHHHHH--HTCEEECEECSHHHHHHHHHTTCCEEEETTHH---H------------------------------
T ss_pred CC-HHHHHHHHH--cCCcEECCcCCHHHHHHHHHcCCCEEEEcCcc---c------------------------------
Confidence 33 456666554 57888889999999999999999999886410 0
Q ss_pred hccCCcHHHHHHHhhcC-CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCC---HHHHHHHHHHHHhc
Q 021575 204 KKIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGD---PVKRAQAIVRAVTH 274 (310)
Q Consensus 204 ~~~~~~~~~i~~i~~~~-~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~d---p~~~a~~l~~~i~~ 274 (310)
...+.++++++.. ++|++ +.|||+ ++++.+++++|+|+|++||+|++ +| |...++++.+.++.
T Consensus 136 ----~g~~~~~~l~~~~~~~pvi--a~GGI~-~~~~~~~~~~Ga~~v~vGs~i~~-~d~~~~~~~~~~~~~~~~~ 202 (205)
T 1wa3_A 136 ----VGPQFVKAMKGPFPNVKFV--PTGGVN-LDNVCEWFKAGVLAVGVGSALVK-GTPDEVREKAKAFVEKIRG 202 (205)
T ss_dssp ----HHHHHHHHHHTTCTTCEEE--EBSSCC-TTTHHHHHHHTCSCEEECHHHHC-SCHHHHHHHHHHHHHHHHH
T ss_pred ----cCHHHHHHHHHhCCCCcEE--EcCCCC-HHHHHHHHHCCCCEEEECccccC-CCHHHHHHHHHHHHHHHHh
Confidence 0134566666655 78998 789995 89999999999999999999999 89 98888888887764
No 49
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=99.47 E-value=5e-13 Score=116.44 Aligned_cols=158 Identities=23% Similarity=0.273 Sum_probs=114.5
Q ss_pred HHHHHHHHhh-cCcceeeccccC--cHHHHHHHHHcCCCEEEeCCCCC---chhHHHHHHhcCCCCcEEEe---cCCH-H
Q 021575 81 PQLIKEIKQS-VTIPVMAKARIG--HFVEAQILEAIGIDYVDESEVLT---PADEENHINKHNFRIPFVCG---CRNL-G 150 (310)
Q Consensus 81 ~~~i~~i~~~-~~iPv~vk~~~~--~~~~a~~~~~aGad~Vi~~~~~~---~~~~~~~i~~~~~~i~~~v~---~~t~-~ 150 (310)
++.++++++. .++|+.+...+. ....++.+.++|+|+|+...... +.++.+.++++ ++.++++ +.|. +
T Consensus 41 ~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~--g~~~~v~~~~~~t~~~ 118 (211)
T 3f4w_A 41 VNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEA--GKQVVVDMICVDDLPA 118 (211)
T ss_dssp THHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHH--TCEEEEECTTCSSHHH
T ss_pred HHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHc--CCeEEEEecCCCCHHH
Confidence 6889999987 589997754432 23348899999999997543322 24455555544 4555544 4454 5
Q ss_pred HHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcC-CCCEEEeCC
Q 021575 151 EALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG-RLPVVHFAA 229 (310)
Q Consensus 151 ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~-~iPVi~iA~ 229 (310)
.+..+.+.|+|+|.++. ++++. +......+.++++++.. ++|++ ++
T Consensus 119 ~~~~~~~~g~d~i~v~~-g~~g~------------------------------~~~~~~~~~i~~l~~~~~~~~i~--~~ 165 (211)
T 3f4w_A 119 RVRLLEEAGADMLAVHT-GTDQQ------------------------------AAGRKPIDDLITMLKVRRKARIA--VA 165 (211)
T ss_dssp HHHHHHHHTCCEEEEEC-CHHHH------------------------------HTTCCSHHHHHHHHHHCSSCEEE--EE
T ss_pred HHHHHHHcCCCEEEEcC-CCccc------------------------------ccCCCCHHHHHHHHHHcCCCcEE--EE
Confidence 57788899999998863 21110 00112466777887764 78998 67
Q ss_pred CCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhc
Q 021575 230 GGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTH 274 (310)
Q Consensus 230 GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~ 274 (310)
|||+ ++++.+++++|||++++||+|++++||...+++|.+.+++
T Consensus 166 gGI~-~~~~~~~~~~Gad~vvvGsai~~~~d~~~~~~~l~~~~~~ 209 (211)
T 3f4w_A 166 GGIS-SQTVKDYALLGPDVVIVGSAITHAADPAGEARKISQVLLQ 209 (211)
T ss_dssp SSCC-TTTHHHHHTTCCSEEEECHHHHTCSSHHHHHHHHHHHHHH
T ss_pred CCCC-HHHHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHHHHhh
Confidence 9995 9999999999999999999999999999999999888765
No 50
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=99.47 E-value=6.1e-14 Score=125.37 Aligned_cols=194 Identities=18% Similarity=0.235 Sum_probs=125.7
Q ss_pred HHHHHHHHcCCcEEEecc-CC--ccccccc----------CCCCCCCCHHHHHHHHhhcCcceeeccccCc------HHH
Q 021575 46 EQARVAEEAGACAVMALE-RV--PADIRSQ----------GGVARMSDPQLIKEIKQSVTIPVMAKARIGH------FVE 106 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~-~~--~~~~~~~----------~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~------~~~ 106 (310)
+.++.++++ +++| +++ |. |.....+ .|.+....++.++++++.+++|+.+....+. .+.
T Consensus 23 ~~a~~~~~~-ad~i-el~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~~~~ 100 (248)
T 1geq_A 23 NFLLALDEY-AGAI-ELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPIVLMTYYNPIYRAGVRNF 100 (248)
T ss_dssp HHHHHHGGG-BSCE-EEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCCEEEEECHHHHHHHCHHHH
T ss_pred HHHHHHHHc-CCEE-EECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCCCEEEEeccchhhhcCHHHH
Confidence 678888888 9987 554 21 1000000 1111111267888999888999888764332 477
Q ss_pred HHHHHHcCCCEEEeCCC--CCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCC-EEEEcCC-CCCcchHHHHHHHH
Q 021575 107 AQILEAIGIDYVDESEV--LTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAA-MIRTKGE-AGTGNIIEAVRHVR 182 (310)
Q Consensus 107 a~~~~~aGad~Vi~~~~--~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad-~V~v~g~-~~~~~~~~~~~~~r 182 (310)
++.+.++|||+|+..+. ..+.++.+.+++++....+.+++.|..+..+....+++ ++.+... +.++.
T Consensus 101 ~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~~~~d~~i~~~~~~G~~g~--------- 171 (248)
T 1geq_A 101 LAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGTTGA--------- 171 (248)
T ss_dssp HHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHHCSSEEEEECCC--------------
T ss_pred HHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHhcCCCeEEEEECCccCCC---------
Confidence 89999999999975432 12445566666666666667777777777776666676 6644222 11111
Q ss_pred hhccceEeecccChhHHHHhhhccC-CcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCC--
Q 021575 183 SVMGDIRVLRNMDDDEVFTFAKKIA-APYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG-- 259 (310)
Q Consensus 183 ~~~~~~~~l~~~~~d~~~~~~~~~~-~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~-- 259 (310)
. .... ...+.++++++..++|++ ++|||++++|+.+++++|+|+|+|||+|+++.
T Consensus 172 ------------~--------~~~~~~~~~~i~~l~~~~~~pi~--~~GGI~~~e~i~~~~~~Gad~vivGsai~~~~~~ 229 (248)
T 1geq_A 172 ------------R--------EEIPKTAYDLLRRAKRICRNKVA--VGFGVSKREHVVSLLKEGANGVVVGSALVKIIGE 229 (248)
T ss_dssp ----------------------CCCHHHHHHHHHHHHHCSSCEE--EESCCCSHHHHHHHHHTTCSEEEECHHHHHHHHH
T ss_pred ------------C--------CCCChhHHHHHHHHHhhcCCCEE--EEeecCCHHHHHHHHHcCCCEEEEcHHHHhhHhh
Confidence 0 0011 125678888877789998 68999988999999999999999999999852
Q ss_pred CHHHHHHHHHHHHh
Q 021575 260 DPVKRAQAIVRAVT 273 (310)
Q Consensus 260 dp~~~a~~l~~~i~ 273 (310)
+| ..+++|++.++
T Consensus 230 ~~-~~~~~~~~~~~ 242 (248)
T 1geq_A 230 KG-REATEFLKKKV 242 (248)
T ss_dssp HG-GGCHHHHHHHH
T ss_pred Ch-HHHHHHHHHHH
Confidence 44 45555655554
No 51
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=99.45 E-value=9.3e-13 Score=118.86 Aligned_cols=181 Identities=15% Similarity=0.233 Sum_probs=115.5
Q ss_pred HHHHHHHHcCCcEEEecc-CCc-------ccc----cc-cCCCCCCCCHHHHHHHHhhcCcceeeccccCcH--HHHHHH
Q 021575 46 EQARVAEEAGACAVMALE-RVP-------ADI----RS-QGGVARMSDPQLIKEIKQSVTIPVMAKARIGHF--VEAQIL 110 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~-~~~-------~~~----~~-~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~--~~a~~~ 110 (310)
+.++.++++|+|+| +|+ |.. ..+ ++ .+|.+....++.++++++.+++|+++..+.+.. ..++.+
T Consensus 36 ~~~~~l~~~Gad~i-elg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~Pv~~m~~~~~~~~~~~~~a 114 (262)
T 1rd5_A 36 EALRLLDGCGADVI-ELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVLLSYYKPIMFRSLAKM 114 (262)
T ss_dssp HHHHHHHHTTCSSE-EEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSCEEEECCSHHHHSCCTHHH
T ss_pred HHHHHHHHcCCCEE-EECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHH
Confidence 67889999999987 665 221 000 00 012211122567888888899999886533311 112448
Q ss_pred HHcCCCEEEeCCCC--CchhHHHHHHhcCCCCcEEEecCC-HHHHHHHHHhCCCEEEEcCC-CCCcchHHHHHHHHhhcc
Q 021575 111 EAIGIDYVDESEVL--TPADEENHINKHNFRIPFVCGCRN-LGEALRRIREGAAMIRTKGE-AGTGNIIEAVRHVRSVMG 186 (310)
Q Consensus 111 ~~aGad~Vi~~~~~--~~~~~~~~i~~~~~~i~~~v~~~t-~~ea~~~~~~Gad~V~v~g~-~~~~~~~~~~~~~r~~~~ 186 (310)
.++|+|+++..+.. +..++.+.+++++....+.+...+ .+.+..+.+.+.+++.+.+. +.+|.
T Consensus 115 ~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~~~~g~v~~~s~~G~tG~------------- 181 (262)
T 1rd5_A 115 KEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGP------------- 181 (262)
T ss_dssp HHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHHHCCSCEEEECSSCCBCT-------------
T ss_pred HHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHhcCCCeEEEecCCCCCCC-------------
Confidence 89999999765431 344555666656655555555544 44445556666666654332 22331
Q ss_pred ceEeecccChhHHHHhhhcc-CCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 021575 187 DIRVLRNMDDDEVFTFAKKI-AAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 187 ~~~~l~~~~~d~~~~~~~~~-~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a 258 (310)
. ... ....++++++++..++||+ +.|||+|++++.+++++|||+|+|||+|+++
T Consensus 182 --------~--------~~~~~~~~~~i~~v~~~~~~pI~--vgGGI~~~e~~~~~~~~GAdgvvVGSai~~~ 236 (262)
T 1rd5_A 182 --------R--------ANVNPRVESLIQEVKKVTNKPVA--VGFGISKPEHVKQIAQWGADGVIIGSAMVRQ 236 (262)
T ss_dssp --------T--------SCBCTHHHHHHHHHHHHCSSCEE--EESCCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred --------C--------cCCCchHHHHHHHHHhhcCCeEE--EECCcCCHHHHHHHHHcCCCEEEEChHHHhH
Confidence 0 011 1125678888887789998 5799999999999999999999999999974
No 52
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=99.45 E-value=4.6e-13 Score=118.41 Aligned_cols=186 Identities=15% Similarity=0.159 Sum_probs=121.8
Q ss_pred HHHHHHHHHcCCcEEEecc--CCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCc-HHHHHHHHHcCCCEEEeC
Q 021575 45 PEQARVAEEAGACAVMALE--RVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGH-FVEAQILEAIGIDYVDES 121 (310)
Q Consensus 45 ~~~A~~~~~~Ga~~i~~L~--~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~-~~~a~~~~~aGad~Vi~~ 121 (310)
.+.++.+.++|++++ ++. ..+.... . ...++.++++++.++.|+.+...++. .+.++.+.++|+|+|..+
T Consensus 26 ~~~i~~~~~~G~d~i-~l~~~dg~f~~~----~--~~~~~~i~~l~~~~~~~~~v~l~vnd~~~~v~~~~~~Gad~v~vh 98 (230)
T 1rpx_A 26 GEQVKAIEQAGCDWI-HVDVMDGRFVPN----I--TIGPLVVDSLRPITDLPLDVHLMIVEPDQRVPDFIKAGADIVSVH 98 (230)
T ss_dssp HHHHHHHHHTTCCCE-EEEEEBSSSSSC----B--CCCHHHHHHHGGGCCSCEEEEEESSSHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHCCCCEE-EEeeccCCcccc----c--ccCHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEEE
Confidence 467888899999987 552 0000000 0 11278999999888888888766654 346888899999999633
Q ss_pred CC----CCchhHHHHHHhcCCCCcEEEec--CCHHHHHHHHHhCCCEEEEcCC--CCCcchHHHHHHHHhhccceEeecc
Q 021575 122 EV----LTPADEENHINKHNFRIPFVCGC--RNLGEALRRIREGAAMIRTKGE--AGTGNIIEAVRHVRSVMGDIRVLRN 193 (310)
Q Consensus 122 ~~----~~~~~~~~~i~~~~~~i~~~v~~--~t~~ea~~~~~~Gad~V~v~g~--~~~~~~~~~~~~~r~~~~~~~~l~~ 193 (310)
.. ..+.+..+.+++. ++.+++.+ +|..+..+....++|+|.+.+. ++++. +
T Consensus 99 ~~~~~~~~~~~~~~~~~~~--g~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg~~g~-------------------~ 157 (230)
T 1rpx_A 99 CEQSSTIHLHRTINQIKSL--GAKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFGGQ-------------------S 157 (230)
T ss_dssp CSTTTCSCHHHHHHHHHHT--TSEEEEEECTTCCGGGGTTTTTTCSEEEEESSCTTCSSC-------------------C
T ss_pred ecCccchhHHHHHHHHHHc--CCcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcCCCCCc-------------------c
Confidence 22 2334555555543 55566655 4555555555678999844332 22221 0
Q ss_pred cChhHHHHhhhccCCcHHHHHHHhhcC-----CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHH
Q 021575 194 MDDDEVFTFAKKIAAPYDLVMQTKQLG-----RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAI 268 (310)
Q Consensus 194 ~~~d~~~~~~~~~~~~~~~i~~i~~~~-----~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l 268 (310)
-.....+.++++++.. ++|++ +.|||+ ++++.+++++|||+|+|||+|++++||...+++|
T Consensus 158 -----------~~~~~~~~i~~l~~~~~~~~~~~pi~--v~GGI~-~~n~~~~~~aGad~vvvgSaI~~a~dp~~a~~~l 223 (230)
T 1rpx_A 158 -----------FIESQVKKISDLRKICAERGLNPWIE--VDGGVG-PKNAYKVIEAGANALVAGSAVFGAPDYAEAIKGI 223 (230)
T ss_dssp -----------CCTTHHHHHHHHHHHHHHHTCCCEEE--EESSCC-TTTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHH
T ss_pred -----------ccHHHHHHHHHHHHHHHhcCCCceEE--EECCCC-HHHHHHHHHcCCCEEEEChhhhCCCCHHHHHHHH
Confidence 0112234445555433 68987 569995 9999999999999999999999999999888877
Q ss_pred HHHH
Q 021575 269 VRAV 272 (310)
Q Consensus 269 ~~~i 272 (310)
.+.+
T Consensus 224 ~~~~ 227 (230)
T 1rpx_A 224 KTSK 227 (230)
T ss_dssp HTCC
T ss_pred HHHH
Confidence 6543
No 53
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.45 E-value=1.8e-13 Score=129.03 Aligned_cols=189 Identities=13% Similarity=0.243 Sum_probs=97.6
Q ss_pred ceeEEEeeCCce-eeeeccCcceeecchhhhhhCcccccCC---CHH-HHHHHHHcCCcEE-EeccCCcccccccCCCCC
Q 021575 4 TGVVAVYGNDGA-ITETKKSPFSVKVGLAQMLRGGVIMDVV---TPE-QARVAEEAGACAV-MALERVPADIRSQGGVAR 77 (310)
Q Consensus 4 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~i~~~~---~~~-~A~~~~~~Ga~~i-~~L~~~~~~~~~~~G~~~ 77 (310)
+|+..+.|+.+. +.+++..+|.+.+-. + ....+.+++ ..+ ..+.++..||+++ +.+|+.++.... .|...
T Consensus 115 ~G~~~~vGs~~~~le~~~~~~~~v~r~~-P--~~~~ianig~~~~~e~~~~~ve~~~adal~ihln~~qe~~~p-~Gd~~ 190 (365)
T 3sr7_A 115 CGLLFVTGSYSTALKNPDDTSYQVKKSR-P--HLLLATNIGLDKPYQAGLQAVRDLQPLFLQVHINLMQELLMP-EGERE 190 (365)
T ss_dssp HTCCEEC--------------------------CCEEEEEETTSCHHHHHHHHHHHCCSCEEEEECHHHHHTSS-SSCCC
T ss_pred cCCCeecccccccccCccccceEehhhC-C--CCcEEEEeCCCCCHHHHHHHHHhcCCCEEEEeccccccccCC-CCCCc
Confidence 578888999987 777777778766533 2 122233332 444 5566678999998 677732221111 12211
Q ss_pred C-CCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHH
Q 021575 78 M-SDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRI 156 (310)
Q Consensus 78 ~-~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~ 156 (310)
. ...+.++.+++.+++||++|.. ++ + .+.++++++.
T Consensus 191 ~~~~~~~I~~l~~~~~~PVivK~v-g~-----------------------------------g-------~s~e~A~~l~ 227 (365)
T 3sr7_A 191 FRSWKKHLSDYAKKLQLPFILKEV-GF-----------------------------------G-------MDVKTIQTAI 227 (365)
T ss_dssp CHHHHHHHHHHHHHCCSCEEEEEC-SS-----------------------------------C-------CCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCEEEEEC-CC-----------------------------------C-------CCHHHHHHHH
Confidence 1 1247899999999999999952 31 0 1335566666
Q ss_pred HhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhcc-CCcHHHHHHHhhc-CCCCEEEeCCCCCCC
Q 021575 157 REGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKI-AAPYDLVMQTKQL-GRLPVVHFAAGGVAT 234 (310)
Q Consensus 157 ~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~-~~~~~~i~~i~~~-~~iPVi~iA~GGI~t 234 (310)
++|+|+|.+.|++++.- ..++..|.. ....+. +. .+....+..++.. .++||+ ++|||++
T Consensus 228 ~aGad~I~V~g~GGt~~--a~ie~~r~~-----~~~~~~---------~~g~pt~~~L~~v~~~~~~ipvi--a~GGI~~ 289 (365)
T 3sr7_A 228 DLGVKTVDISGRGGTSF--AYIENRRGG-----NRSYLN---------QWGQTTAQVLLNAQPLMDKVEIL--ASGGIRH 289 (365)
T ss_dssp HHTCCEEECCCBC---------------------CGGGT---------TCSCBHHHHHHHHGGGTTTSEEE--ECSSCCS
T ss_pred HcCCCEEEEeCCCCccc--chhhccccc-----cccccc---------cccccHHHHHHHHHHhcCCCeEE--EeCCCCC
Confidence 77777777766543320 011111100 000000 11 2234455555443 268998 8999999
Q ss_pred HHHHHHHHHcCCCEEEEcccccc
Q 021575 235 PADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 235 ~~d~~~~l~~GadgV~VGsai~~ 257 (310)
+.|+.+++.+|||+|++|++++.
T Consensus 290 g~Dv~KaLalGAdaV~ig~~~l~ 312 (365)
T 3sr7_A 290 PLDIIKALVLGAKAVGLSRTMLE 312 (365)
T ss_dssp HHHHHHHHHHTCSEEEESHHHHH
T ss_pred HHHHHHHHHcCCCEEEECHHHHH
Confidence 99999999999999999999885
No 54
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=99.44 E-value=5.3e-13 Score=120.71 Aligned_cols=196 Identities=16% Similarity=0.158 Sum_probs=124.2
Q ss_pred HHHHHHHHHcCCcEEEecc-CC-------cccccc-----cCCCCCCCCHHHHHHHHhhc-Ccceeecccc------CcH
Q 021575 45 PEQARVAEEAGACAVMALE-RV-------PADIRS-----QGGVARMSDPQLIKEIKQSV-TIPVMAKARI------GHF 104 (310)
Q Consensus 45 ~~~A~~~~~~Ga~~i~~L~-~~-------~~~~~~-----~~G~~~~~~~~~i~~i~~~~-~iPv~vk~~~------~~~ 104 (310)
.+.++.++++|+|+| .++ |. |..++. ..|.+....++.++++++.+ ++|+++.... +..
T Consensus 34 ~~~~~~l~~~G~D~I-ElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~ 112 (262)
T 2ekc_A 34 LKAFKEVLKNGTDIL-EIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTYYNPIFRIGLE 112 (262)
T ss_dssp HHHHHHHHHTTCSEE-EEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEECCHHHHHHHCHH
T ss_pred HHHHHHHHHcCCCEE-EECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEEecCcHHHHhhHH
Confidence 367999999999987 554 22 111111 12332222357788999888 9999884222 224
Q ss_pred HHHHHHHHcCCCEEEeCCCCCch---hHHHHHHhcCCCCcEEEec-CCHHHHHHHHHhCCCEEEEcCC-CCCcchHHHHH
Q 021575 105 VEAQILEAIGIDYVDESEVLTPA---DEENHINKHNFRIPFVCGC-RNLGEALRRIREGAAMIRTKGE-AGTGNIIEAVR 179 (310)
Q Consensus 105 ~~a~~~~~aGad~Vi~~~~~~~~---~~~~~i~~~~~~i~~~v~~-~t~~ea~~~~~~Gad~V~v~g~-~~~~~~~~~~~ 179 (310)
.+++.+.++|+|+++.++. .+. ++.+.+++++..+..++.. .+.+.+....+.+..++..... +.||.-
T Consensus 113 ~f~~~~~~aG~dgvii~dl-~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~~g~TG~~----- 186 (262)
T 2ekc_A 113 KFCRLSREKGIDGFIVPDL-PPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEMTYFVSVTGTTGAR----- 186 (262)
T ss_dssp HHHHHHHHTTCCEEECTTC-CHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHCSSCEEEESSCC----------
T ss_pred HHHHHHHHcCCCEEEECCC-CHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCCEEEEecCCccCCC-----
Confidence 6678899999999987653 333 4455555566553344443 4555556666665555543322 223310
Q ss_pred HHHhhccceEeecccChhHHHHhhhccC-C-cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 021575 180 HVRSVMGDIRVLRNMDDDEVFTFAKKIA-A-PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 180 ~~r~~~~~~~~l~~~~~d~~~~~~~~~~-~-~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~ 257 (310)
.... . ..++++.+++..++|+. .+|||++++++.+ +..|||+|+|||+|++
T Consensus 187 ------------------------~~~~~~~~~~~v~~vr~~~~~pv~--vG~GI~t~e~~~~-~~~gADgvIVGSai~~ 239 (262)
T 2ekc_A 187 ------------------------EKLPYERIKKKVEEYRELCDKPVV--VGFGVSKKEHARE-IGSFADGVVVGSALVK 239 (262)
T ss_dssp ----------------------------CHHHHHHHHHHHHHCCSCEE--EESSCCSHHHHHH-HHTTSSEEEECHHHHH
T ss_pred ------------------------CCcCcccHHHHHHHHHhhcCCCEE--EeCCCCCHHHHHH-HHcCCCEEEECHHHHh
Confidence 0011 1 24678888887889998 6899999999999 7789999999999998
Q ss_pred C--CCHHHHHHHHHHHHhc
Q 021575 258 S--GDPVKRAQAIVRAVTH 274 (310)
Q Consensus 258 a--~dp~~~a~~l~~~i~~ 274 (310)
. +++...+++|.+.++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~ 258 (262)
T 2ekc_A 240 LAGQKKIEDLGNLVKELKE 258 (262)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHHH
Confidence 6 4555566667766654
No 55
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=99.43 E-value=7.9e-13 Score=119.91 Aligned_cols=183 Identities=20% Similarity=0.215 Sum_probs=118.8
Q ss_pred HHHHHHHHHcCCcEEEecc-CC-------ccccc----c-cCCCCCCCCHHHHHHHHhh-cCcceeecccc------CcH
Q 021575 45 PEQARVAEEAGACAVMALE-RV-------PADIR----S-QGGVARMSDPQLIKEIKQS-VTIPVMAKARI------GHF 104 (310)
Q Consensus 45 ~~~A~~~~~~Ga~~i~~L~-~~-------~~~~~----~-~~G~~~~~~~~~i~~i~~~-~~iPv~vk~~~------~~~ 104 (310)
.+.++.++++|+|+| .++ |. |..++ + .+|.+....++.++++++. +++|+.+.... +..
T Consensus 34 ~~~~~~l~~~GaD~i-eig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~ 112 (268)
T 1qop_A 34 LKIIDTLIDAGADAL-ELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFNNGID 112 (268)
T ss_dssp HHHHHHHHHTTCSSE-EEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHTTCHH
T ss_pred HHHHHHHHHCCCCEE-EECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHHhhHH
Confidence 367999999999987 554 21 11111 0 1122211225789999988 79998774211 224
Q ss_pred HHHHHHHHcCCCEEEeCCCC--CchhHHHHHHhcCCCCcEEE-ecCCHHHHHHHHHhCCCEEEEcCC-CCCcchHHHHHH
Q 021575 105 VEAQILEAIGIDYVDESEVL--TPADEENHINKHNFRIPFVC-GCRNLGEALRRIREGAAMIRTKGE-AGTGNIIEAVRH 180 (310)
Q Consensus 105 ~~a~~~~~aGad~Vi~~~~~--~~~~~~~~i~~~~~~i~~~v-~~~t~~ea~~~~~~Gad~V~v~g~-~~~~~~~~~~~~ 180 (310)
.+++.+.++|+|+++.++.. +..++.+.+++++.....++ ...+.+.+....+.+.+++.+... +.||..
T Consensus 113 ~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~i~~~~~g~v~~~s~~G~tG~~------ 186 (268)
T 1qop_A 113 AFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAE------ 186 (268)
T ss_dssp HHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEEESSSSCCCSS------
T ss_pred HHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhhCCCcEEEEecCCcCCCc------
Confidence 67889999999999866542 34566677766665533333 345556566666666555543221 223310
Q ss_pred HHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 021575 181 VRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 181 ~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a 258 (310)
. .......++++++++..++||+ .+|||+|++++.+++..|||+|+|||+|++.
T Consensus 187 --------------~--------~~~~~~~~~i~~lr~~~~~pi~--vggGI~t~e~~~~~~~agAD~vVVGSai~~~ 240 (268)
T 1qop_A 187 --------------N--------RGALPLHHLIEKLKEYHAAPAL--QGFGISSPEQVSAAVRAGAAGAISGSAIVKI 240 (268)
T ss_dssp --------------S--------CC--CCHHHHHHHHHTTCCCEE--EESSCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred --------------c--------CCCchHHHHHHHHHhccCCcEE--EECCCCCHHHHHHHHHcCCCEEEEChHHhhh
Confidence 0 0012346788889888889998 6899999999999999999999999999974
No 56
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.42 E-value=1.9e-13 Score=129.13 Aligned_cols=249 Identities=15% Similarity=0.142 Sum_probs=139.1
Q ss_pred ceeEEEeeCCce-eeeec-cCcceeecchhhhhhCcc---------cccCCCHHHHHH-HHHcCCcEE-EeccCCccccc
Q 021575 4 TGVVAVYGNDGA-ITETK-KSPFSVKVGLAQMLRGGV---------IMDVVTPEQARV-AEEAGACAV-MALERVPADIR 70 (310)
Q Consensus 4 ~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~g~---------i~~~~~~~~A~~-~~~~Ga~~i-~~L~~~~~~~~ 70 (310)
+|+..+.|+.++ +++++ ..+|.+.+.... .++ +..-.+++.++. +...+++++ +++|+.++...
T Consensus 88 ~G~~~~vGs~~~~l~~~~~~~s~~~vr~~ap---~~~~~anlg~~ql~~~~~~~~~~~av~~~~a~al~Ihln~~~~~~~ 164 (368)
T 3vkj_A 88 FGIPMGVGSQRVAIEKAEARESFAIVRKVAP---TIPIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQ 164 (368)
T ss_dssp HTCCEECCCCHHHHHCGGGSHHHHHHHHHCS---SSCEEEEEEGGGGGTTCCHHHHHHHHHHTTCSEEEEECCHHHHHHS
T ss_pred hCCCeeeecchhccCCHHHHhhHHHHHHhCc---CcceecCcCeeecCCCCCHHHHHHHHHHhcCCCeEEEecchhhhhC
Confidence 578889999987 77776 567765553333 121 111133555544 444566665 58875433222
Q ss_pred ccCCCCCC--CCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCC
Q 021575 71 SQGGVARM--SDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRN 148 (310)
Q Consensus 71 ~~~G~~~~--~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t 148 (310)
. .|.... ...+.++.+++.+++||++|.. ++ + .+
T Consensus 165 p-~g~~~~~~~~~~~i~~i~~~~~vPVivK~v-G~-----------------------------------g-------~s 200 (368)
T 3vkj_A 165 P-EGEPEYQIYALEKLRDISKELSVPIIVKES-GN-----------------------------------G-------IS 200 (368)
T ss_dssp S-SCCCBCBTHHHHHHHHHHTTCSSCEEEECS-SS-----------------------------------C-------CC
T ss_pred C-CCCchhhHHHHHHHHHHHHHcCCCEEEEeC-CC-----------------------------------C-------CC
Confidence 1 122111 1467899999999999999963 21 0 12
Q ss_pred HHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhcc-CCcHHHHHHHhhcC-CCCEEE
Q 021575 149 LGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKI-AAPYDLVMQTKQLG-RLPVVH 226 (310)
Q Consensus 149 ~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~-~~~~~~i~~i~~~~-~iPVi~ 226 (310)
.++++++.++|+|+|.+.|+++|.. ..+|..|.... ...+..+..+-.+. .+....+.++++.. ++||+
T Consensus 201 ~~~A~~l~~aGad~I~V~g~GGt~~--~~iE~~R~~~~------~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~~ipvi- 271 (368)
T 3vkj_A 201 METAKLLYSYGIKNFDTSGQGGTNW--IAIEMIRDIRR------GNWKAESAKNFLDWGVPTAASIMEVRYSVPDSFLV- 271 (368)
T ss_dssp HHHHHHHHHTTCCEEECCCBTSBCH--HHHHHHHHHHT------TCTHHHHHHHTTTCSCBHHHHHHHHHHHSTTCEEE-
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCcc--cchhhhhcccc------cccchhhccccccccccHHHHHHHHHHHcCCCcEE-
Confidence 3556667777777777776655432 22333332100 00000000000011 22344555666555 58998
Q ss_pred eCCCCCCCHHHHHHHHHcCCCEEEEccccccC--CCHH---HHHHHHHHHHhccCChhhhhhhhhhcccchh-------c
Q 021575 227 FAAGGVATPADAAMMMQLGCDGVFVGSGVFKS--GDPV---KRAQAIVRAVTHYSDPEVLAEVSCGLGEAMV-------G 294 (310)
Q Consensus 227 iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a--~dp~---~~a~~l~~~i~~~~~~~~~~~~~~~~~~~~~-------~ 294 (310)
++|||+++.|+.+++.+|||+|++|++++.+ ..|. ...+.+.+.++.++..-++.+++++.+.... .
T Consensus 272 -a~GGI~~~~d~~kal~lGA~~v~ig~~~l~~~~~G~~~v~~~l~~l~~eL~~~m~~~G~~~i~el~~~~l~~~~~l~~~ 350 (368)
T 3vkj_A 272 -GSGGIRSGLDAAKAIALGADIAGMALPVLKSAIEGKESLEQFFRKIIFELKAAMMLTGSKDVDALKKTSIVILGKLKEW 350 (368)
T ss_dssp -EESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBHHHHHTCCEEECHHHHHH
T ss_pred -EECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCCCHHHhccCCEEechhHHHH
Confidence 8999999999999999999999999998842 1232 2444555666555544444455554433222 1
Q ss_pred ccCccchhhhhcccC
Q 021575 295 LNLSDHKVERFASRS 309 (310)
Q Consensus 295 ~~~~~~~~~~~~~~~ 309 (310)
+..+.++..+|+.|+
T Consensus 351 ~~~r~~~~~~~~~~~ 365 (368)
T 3vkj_A 351 AEYRGINLSIYEKVR 365 (368)
T ss_dssp HHHHTCCHHHHHHHH
T ss_pred HHHcCCChHHHHhhh
Confidence 223445666666654
No 57
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.42 E-value=1.3e-11 Score=116.00 Aligned_cols=194 Identities=14% Similarity=0.159 Sum_probs=129.3
Q ss_pred eccCcceeecchhhhhhCcccccCCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeec
Q 021575 19 TKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAK 98 (310)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~g~i~~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk 98 (310)
++...+.+..|++. +.+..++++++|+++.++|.-+++.- + ...+.+.+..+.+..++...
T Consensus 34 t~l~g~~l~~Pii~----ApM~~vte~~lA~A~a~~Gg~gvi~~---------~------~s~ee~~~~i~~~~~~~~~~ 94 (361)
T 3r2g_A 34 DRLGKLTLNLPVIS----ANMDTITESNMANFMHSKGAMGALHR---------F------MTIEENIQEFKKCKGPVFVS 94 (361)
T ss_dssp CTTSSCEESSCEEE----CCSTTTCSHHHHHHHHHTTCEEBCCS---------C------SCHHHHHHHHHTCCSCCBEE
T ss_pred EEECCEEcCCCEEE----CCCCCchHHHHHHHHHHcCCCEEEeC---------C------CCHHHHHHHHhhcceEEEEE
Confidence 35667778899888 55788999999999999997654221 1 12444333322333333332
Q ss_pred ccc--CcHHHHHHHHHcCCCEEEe--CCCCC--chhHHHHHHhcCCCCcEEE-ecCCHHHHHHHHHhCCCEEEEcCCCCC
Q 021575 99 ARI--GHFVEAQILEAIGIDYVDE--SEVLT--PADEENHINKHNFRIPFVC-GCRNLGEALRRIREGAAMIRTKGEAGT 171 (310)
Q Consensus 99 ~~~--~~~~~a~~~~~aGad~Vi~--~~~~~--~~~~~~~i~~~~~~i~~~v-~~~t~~ea~~~~~~Gad~V~v~g~~~~ 171 (310)
... ...+.++.+.++|+|.|.. +.... ..+.++.+++..+++++++ .+.|.++++.+.++|+|+|.+....+
T Consensus 95 ~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg~g~G- 173 (361)
T 3r2g_A 95 VGCTENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKAGIGGG- 173 (361)
T ss_dssp ECSSHHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEECCSSS-
T ss_pred cCCCHHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEEcCCCC-
Confidence 221 2356788999999998853 33222 2245566665445788888 59999999999999999999853322
Q ss_pred cchHHHHHHHHhhccceEeecccChhHHHHhhhcc-CCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEE
Q 021575 172 GNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKI-AAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVF 250 (310)
Q Consensus 172 ~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~-~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~ 250 (310)
..+++ +. . ... .+.+..+.++.+..+ ||+ +.|||+++.|+.+++.+|||+|+
T Consensus 174 -~~~~t----r~-------~------------~g~g~p~l~aI~~~~~~~~-PVI--AdGGI~~~~di~kALa~GAd~V~ 226 (361)
T 3r2g_A 174 -SVCST----RI-------K------------TGFGVPMLTCIQDCSRADR-SIV--ADGGIKTSGDIVKALAFGADFVM 226 (361)
T ss_dssp -SCHHH----HH-------H------------HCCCCCHHHHHHHHTTSSS-EEE--EESCCCSHHHHHHHHHTTCSEEE
T ss_pred -cCccc----cc-------c------------CCccHHHHHHHHHHHHhCC-CEE--EECCCCCHHHHHHHHHcCCCEEE
Confidence 11110 00 0 011 234566666665444 998 78999999999999999999999
Q ss_pred EccccccCC
Q 021575 251 VGSGVFKSG 259 (310)
Q Consensus 251 VGsai~~a~ 259 (310)
+||+|+.++
T Consensus 227 iGr~f~~t~ 235 (361)
T 3r2g_A 227 IGGMLAGSA 235 (361)
T ss_dssp ESGGGTTBT
T ss_pred EChHHhCCc
Confidence 999999864
No 58
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=99.42 E-value=1e-12 Score=117.11 Aligned_cols=170 Identities=22% Similarity=0.246 Sum_probs=123.3
Q ss_pred HHHHHHHHcCCCEEEe----CCC--CCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHh-----CCCEEEE--cC--CC
Q 021575 105 VEAQILEAIGIDYVDE----SEV--LTPADEENHINKHNFRIPFVCGCRNLGEALRRIRE-----GAAMIRT--KG--EA 169 (310)
Q Consensus 105 ~~a~~~~~aGad~Vi~----~~~--~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~-----Gad~V~v--~g--~~ 169 (310)
...+.+.++|++.|.. .+. -....+.+.+. ...-+++..+|+|.+|+.++.++ |-++|++ ++ +.
T Consensus 27 ~~~~ai~asg~eivtva~rR~~~~~~~~~~~~~~i~-~~~~lpntaG~~taeeAv~~a~lare~~gt~~iKlEvi~d~~~ 105 (268)
T 2htm_A 27 VMREAIAAAKAEVVTVSVRRVELKAPGHVGLLEALE-GVRLLPNTAGARTAEEAVRLARLGRLLTGERWVKLEVIPDPTY 105 (268)
T ss_dssp HHHHHHHHTTCSEEEEEEEECC-------CHHHHTT-TSEEEEBCTTCCSHHHHHHHHHHHHHHHCCSEEBCCCCSCTTT
T ss_pred HHHHHHHHhCCCEEEEEccccCCCCCCcccHHHHHh-hhhccCcccCCCCHHHHHHHHHhhhHhcCcceeeeeeccCccc
Confidence 3346677899998841 111 12245666665 22237889999999999997664 5566652 22 12
Q ss_pred CCcchHHHHHHHHhhccc-eEeecccChhHHHHhh-----------------hcc-CCcHHHHHHHhh-cCC-CCEEEeC
Q 021575 170 GTGNIIEAVRHVRSVMGD-IRVLRNMDDDEVFTFA-----------------KKI-AAPYDLVMQTKQ-LGR-LPVVHFA 228 (310)
Q Consensus 170 ~~~~~~~~~~~~r~~~~~-~~~l~~~~~d~~~~~~-----------------~~~-~~~~~~i~~i~~-~~~-iPVi~iA 228 (310)
...++.+++++.+.+.+. +.+++++.+|..+... .+. ....++++.+++ ..+ +||| +
T Consensus 106 l~pD~~~tv~aa~~L~k~Gf~Vlpy~~~D~~~ak~l~~~G~~aVmPlg~pIGsG~Gi~~~~~L~~i~~~~~~~vPVI--~ 183 (268)
T 2htm_A 106 LLPDPLETLKAAERLIEEDFLVLPYMGPDLVLAKRLAALGTATVMPLAAPIGSGWGVRTRALLELFAREKASLPPVV--V 183 (268)
T ss_dssp TCCCHHHHHHHHHHHHHTTCEECCEECSCHHHHHHHHHHTCSCBEEBSSSTTTCCCSTTHHHHHHHHHTTTTSSCBE--E
T ss_pred cCcCHHHHHHHHHHHHHCCCEEeeccCCCHHHHHHHHhcCCCEEEecCccCcCCcccCCHHHHHHHHHhcCCCCeEE--E
Confidence 356778899999998777 8999888776543110 000 113566888887 678 9998 6
Q ss_pred CCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhccCC
Q 021575 229 AGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHYSD 277 (310)
Q Consensus 229 ~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~~~ 277 (310)
.|||.+++|+.+++++|||||+|||+|++++||..++++|+++++.++.
T Consensus 184 ~GGI~tpsDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~af~~Av~agr~ 232 (268)
T 2htm_A 184 DAGLGLPSHAAEVMELGLDAVLVNTAIAEAQDPPAMAEAFRLAVEAGRK 232 (268)
T ss_dssp ESCCCSHHHHHHHHHTTCCEEEESHHHHTSSSHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999987543
No 59
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=99.41 E-value=6.3e-13 Score=117.12 Aligned_cols=162 Identities=20% Similarity=0.277 Sum_probs=112.6
Q ss_pred HHHHHHHHhhcCcceeecccc--Cc-----HHHHHHHHHcCCCEEEeCC---CCCchhHHHHHHh-cCCCCcEEEecCCH
Q 021575 81 PQLIKEIKQSVTIPVMAKARI--GH-----FVEAQILEAIGIDYVDESE---VLTPADEENHINK-HNFRIPFVCGCRNL 149 (310)
Q Consensus 81 ~~~i~~i~~~~~iPv~vk~~~--~~-----~~~a~~~~~aGad~Vi~~~---~~~~~~~~~~i~~-~~~~i~~~v~~~t~ 149 (310)
+..++.+++.+++|++.++.- .. ...++.+.++|||+|+..+ .++..++.+.++. ...++.+++++++.
T Consensus 42 ~~~l~~v~~~~~~~v~aqd~~~~~~ga~tGei~~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl~~iv~v~~~ 121 (219)
T 2h6r_A 42 FVDLRMIVENVNIPVYAQHIDNINPGSHTGHILAEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLGLETIVCTNNI 121 (219)
T ss_dssp TTTHHHHHHHCCSCBEESCCCSCCSBSCTTCCCHHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred HHHHHHHHHHcCCcEEEEECChhhcCCccCchHHHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 567788888889999997621 10 1237889999999997544 3555566555544 44689999999988
Q ss_pred HHHHHHHHhCCCEEEEcCCC--CCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcC-CCCEEE
Q 021575 150 GEALRRIREGAAMIRTKGEA--GTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG-RLPVVH 226 (310)
Q Consensus 150 ~ea~~~~~~Gad~V~v~g~~--~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~-~iPVi~ 226 (310)
++..++.+.|++++.+++.. +||.- +.+.+++ ......+.+++.. ++|++
T Consensus 122 ~e~~~~~~~~~~~i~~~~~~~iGtG~~----------------~~t~~~~----------~~~~~~~~ir~~~~~~~ii- 174 (219)
T 2h6r_A 122 NTSKAVAALSPDCIAVEPPELIGTGIP----------------VSKANPE----------VVEGTVRAVKEINKDVKVL- 174 (219)
T ss_dssp HHHHHHTTTCCSEEEECCCC----------------------------------------CSHHHHHHHHHHCTTCEEE-
T ss_pred hHHHHHHhCCCCEEEEEeccccccCCC----------------CccCCHH----------HHHHHHHHHHhccCCCeEE-
Confidence 88888888899999988643 33310 0011111 0112233333333 68998
Q ss_pred eCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHH
Q 021575 227 FAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVR 270 (310)
Q Consensus 227 iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~ 270 (310)
+.|||++++++..+.+.|+||++|||++++++||....++|++
T Consensus 175 -~ggGI~~~~~~~~~~~~gaDgvlVGsAi~~~~d~~~~~~~l~~ 217 (219)
T 2h6r_A 175 -CGAGISKGEDVKAALDLGAEGVLLASGVVKAKNVEEAIRELIK 217 (219)
T ss_dssp -ECSSCCSHHHHHHHHTTTCCCEEESHHHHTCSSHHHHHHHHCC
T ss_pred -EEeCcCcHHHHHHHhhCCCCEEEEcHHHhCcccHHHHHHHHHH
Confidence 6899999999999999999999999999999999887776643
No 60
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=99.38 E-value=1.6e-12 Score=116.34 Aligned_cols=179 Identities=17% Similarity=0.147 Sum_probs=119.3
Q ss_pred HHHHHHHHHcCCcEEEecc-----CC---ccccccc-----CCCCCCCCHHHHHHHHhhcCcceeecccc------CcHH
Q 021575 45 PEQARVAEEAGACAVMALE-----RV---PADIRSQ-----GGVARMSDPQLIKEIKQSVTIPVMAKARI------GHFV 105 (310)
Q Consensus 45 ~~~A~~~~~~Ga~~i~~L~-----~~---~~~~~~~-----~G~~~~~~~~~i~~i~~~~~iPv~vk~~~------~~~~ 105 (310)
.+.++.+.++|||.| +|. |. |..+++. +|.+....++.++++|+. +|+++.... |...
T Consensus 31 ~~~~~~l~~~GaD~i-ElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~--~Pivlm~Y~N~i~~~G~e~ 107 (252)
T 3tha_A 31 EAFLQRLDQSPIDIL-ELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTK--KALVFMVYYNLIFSYGLEK 107 (252)
T ss_dssp HHHHHTGGGSSCSEE-EEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCS--SEEEEECCHHHHHHHCHHH
T ss_pred HHHHHHHHHcCCCEE-EECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcC--CCEEEEeccCHHHHhhHHH
Confidence 367888899999976 664 21 3333222 244433445566666544 899886543 3356
Q ss_pred HHHHHHHcCCCEEEeCCCC--CchhHHHHHHhcCCCCcEEEecCC-HHHHHHHHHhCCCEEEEcCCC-CCcchHHHHHHH
Q 021575 106 EAQILEAIGIDYVDESEVL--TPADEENHINKHNFRIPFVCGCRN-LGEALRRIREGAAMIRTKGEA-GTGNIIEAVRHV 181 (310)
Q Consensus 106 ~a~~~~~aGad~Vi~~~~~--~~~~~~~~i~~~~~~i~~~v~~~t-~~ea~~~~~~Gad~V~v~g~~-~~~~~~~~~~~~ 181 (310)
+++.+.++|+|+++.++.. +..++.+.+++++.....++..+| .+.+++..+.+..+|.+-... -||.-.
T Consensus 108 F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~~------ 181 (252)
T 3tha_A 108 FVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIYLLASIGITGTKS------ 181 (252)
T ss_dssp HHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCEEEECCSCSSSCSH------
T ss_pred HHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEEEEecCCCCCccc------
Confidence 7899999999999988752 345666677777777666666655 555665666666676544322 233200
Q ss_pred HhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 021575 182 RSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 182 r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~ 257 (310)
.. .....++++++++..++|++ .++||++++++.++.+ +||||+|||+|++
T Consensus 182 ----------------~~------~~~~~~~v~~vr~~~~~Pv~--vGfGIst~e~a~~~~~-~ADGVIVGSAiVk 232 (252)
T 3tha_A 182 ----------------VE------EAILQDKVKEIRSFTNLPIF--VGFGIQNNQDVKRMRK-VADGVIVGTSIVK 232 (252)
T ss_dssp ----------------HH------HHHHHHHHHHHHTTCCSCEE--EESSCCSHHHHHHHTT-TSSEEEECHHHHH
T ss_pred ----------------CC------CHHHHHHHHHHHHhcCCcEE--EEcCcCCHHHHHHHHh-cCCEEEECHHHHH
Confidence 00 01124678888888889998 6899999999998766 6999999999986
No 61
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=99.38 E-value=3.3e-11 Score=106.59 Aligned_cols=156 Identities=14% Similarity=0.139 Sum_probs=116.3
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcc-eeeccccCcHHHHHHHHHcCCCEEEeCCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIP-VMAKARIGHFVEAQILEAIGIDYVDESEVL 124 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iP-v~vk~~~~~~~~a~~~~~aGad~Vi~~~~~ 124 (310)
++++++.++|++.+ ++. ... ....+.++++++.+.-. +..... -..++++.+.++||++++.+.
T Consensus 50 ~~a~al~~gGi~~i-Evt-------~~t----~~a~e~I~~l~~~~~~~~iGaGTV-lt~~~a~~Ai~AGA~fIvsP~-- 114 (232)
T 4e38_A 50 PLGKVLAENGLPAA-EIT-------FRS----DAAVEAIRLLRQAQPEMLIGAGTI-LNGEQALAAKEAGATFVVSPG-- 114 (232)
T ss_dssp HHHHHHHHTTCCEE-EEE-------TTS----TTHHHHHHHHHHHCTTCEEEEECC-CSHHHHHHHHHHTCSEEECSS--
T ss_pred HHHHHHHHCCCCEE-EEe-------CCC----CCHHHHHHHHHHhCCCCEEeECCc-CCHHHHHHHHHcCCCEEEeCC--
Confidence 67889999999987 541 110 11157888888876323 333332 246889999999999997554
Q ss_pred CchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhh
Q 021575 125 TPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAK 204 (310)
Q Consensus 125 ~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~ 204 (310)
...++.+.+++ .+++++.++.|+.|+.++.++|+|+|++++....
T Consensus 115 ~~~~vi~~~~~--~gi~~ipGv~TptEi~~A~~~Gad~vK~FPa~~~--------------------------------- 159 (232)
T 4e38_A 115 FNPNTVRACQE--IGIDIVPGVNNPSTVEAALEMGLTTLKFFPAEAS--------------------------------- 159 (232)
T ss_dssp CCHHHHHHHHH--HTCEEECEECSHHHHHHHHHTTCCEEEECSTTTT---------------------------------
T ss_pred CCHHHHHHHHH--cCCCEEcCCCCHHHHHHHHHcCCCEEEECcCccc---------------------------------
Confidence 24556666654 4889999999999999999999999999764211
Q ss_pred ccCCcHHHHHHHhhc-CCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 021575 205 KIAAPYDLVMQTKQL-GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 205 ~~~~~~~~i~~i~~~-~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~ 257 (310)
...+.++.++.. .++|++ +.||| +++++.+++++|+.++++||.++.
T Consensus 160 ---gG~~~lkal~~p~p~ip~~--ptGGI-~~~n~~~~l~aGa~~~vgGs~l~~ 207 (232)
T 4e38_A 160 ---GGISMVKSLVGPYGDIRLM--PTGGI-TPSNIDNYLAIPQVLACGGTWMVD 207 (232)
T ss_dssp ---THHHHHHHHHTTCTTCEEE--EBSSC-CTTTHHHHHTSTTBCCEEECGGGC
T ss_pred ---cCHHHHHHHHHHhcCCCee--eEcCC-CHHHHHHHHHCCCeEEEECchhcC
Confidence 124567777664 478998 78999 699999999999999999999985
No 62
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.38 E-value=2e-11 Score=114.10 Aligned_cols=239 Identities=13% Similarity=0.096 Sum_probs=148.6
Q ss_pred eeccCcceeecchhhhhhCcccccCCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceee
Q 021575 18 ETKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMA 97 (310)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~v 97 (310)
.++...+.+..|++. ..+..+++.++|+++.+.|.-.++..+ . +. ...+.++++++ .+.|+.+
T Consensus 37 ~t~i~g~~l~~Pi~~----a~mag~s~~~la~a~~~~gg~g~~~~~-~----~~-------~~~~~i~~~~~-~g~~v~v 99 (336)
T 1ypf_A 37 TVTLGKHKFKLPVVP----ANMQTIIDERIATYLAENNYFYIMHRF-Q----PE-------KRISFIRDMQS-RGLIASI 99 (336)
T ss_dssp CEEETTEEESSSEEE----CSSTTTCCHHHHHHHHHTTCCCCCCCS-S----GG-------GHHHHHHHHHH-TTCCCEE
T ss_pred eEEECCEEecCcEEE----CCCCCCChHHHHHHHHhCCCEEEecCC-C----CH-------HHHHHHHHHHh-cCCeEEE
Confidence 444556778888888 455567889998887777654432110 0 00 01344555543 3667777
Q ss_pred ccccC--cHHHHHHHHHcC--CCEEEe--CCCC--CchhHHHHHHhcCCCCcEEEe-cCCHHHHHHHHHhCCCEEEEcCC
Q 021575 98 KARIG--HFVEAQILEAIG--IDYVDE--SEVL--TPADEENHINKHNFRIPFVCG-CRNLGEALRRIREGAAMIRTKGE 168 (310)
Q Consensus 98 k~~~~--~~~~a~~~~~aG--ad~Vi~--~~~~--~~~~~~~~i~~~~~~i~~~v~-~~t~~ea~~~~~~Gad~V~v~g~ 168 (310)
..... ..+.++.+.++| ++.+.. .... ...+.++.+++.-.+.+++.+ +.+.++++++.++|+|.|.+.+.
T Consensus 100 ~~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~h 179 (336)
T 1ypf_A 100 SVGVKEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGIG 179 (336)
T ss_dssp EECCSHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSS
T ss_pred eCCCCHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEecC
Confidence 64222 235567788899 999842 2211 123445555554335666666 88999999999999999998654
Q ss_pred CCCcchHHHHHHHHhhccceEeecccChhHHHHhhhcc-CC--cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC
Q 021575 169 AGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKI-AA--PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG 245 (310)
Q Consensus 169 ~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~-~~--~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G 245 (310)
+++.. ... + . ... .+ +++.+.++++..++||+ ++|||+++.|+.+++.+|
T Consensus 180 gG~~~--~~~-----------------~-----~-~~~g~~g~~~~~l~~v~~~~~ipVI--a~GGI~~g~Dv~kalalG 232 (336)
T 1ypf_A 180 PGKVC--ITK-----------------I-----K-TGFGTGGWQLAALRWCAKAASKPII--ADGGIRTNGDVAKSIRFG 232 (336)
T ss_dssp CSTTC--HHH-----------------H-----H-HSCSSTTCHHHHHHHHHHTCSSCEE--EESCCCSTHHHHHHHHTT
T ss_pred CCcee--ecc-----------------c-----c-cCcCCchhHHHHHHHHHHHcCCcEE--EeCCCCCHHHHHHHHHcC
Confidence 33210 000 0 0 011 22 47788888887899998 789999999999999999
Q ss_pred CCEEEEccccccCCCHHH--------HHHHHHHHHhccC-----------C---------hhhhhhhhhhcccchhcccC
Q 021575 246 CDGVFVGSGVFKSGDPVK--------RAQAIVRAVTHYS-----------D---------PEVLAEVSCGLGEAMVGLNL 297 (310)
Q Consensus 246 adgV~VGsai~~a~dp~~--------~a~~l~~~i~~~~-----------~---------~~~~~~~~~~~~~~~~~~~~ 297 (310)
||+|++|++++.++.... ..+.+. .+-.+. + .+.+..+...+...|-.+|.
T Consensus 233 AdaV~iGr~~l~t~Es~~~~~~~~g~~~k~~~-g~~~~~~~g~~~~~~g~~~~~~~~g~~~~~~~~l~~el~~~m~~~G~ 311 (336)
T 1ypf_A 233 ATMVMIGSLFAGHEESPGETIEKDGKLYKEYF-GSASEFQKGEKKNVEGKKMFVEHKGSLEDTLIEMEQDLQSSISYAGG 311 (336)
T ss_dssp CSEEEESGGGTTCTTSSSCCC------------------------CTTSCCSSSSCCCCHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCEEEeChhhhccccCCCceeeeCCeEeeeee-cccchhhccCccccccceeeecccccHHHHHHHHHHHHHHHHHHhCc
Confidence 999999999995321100 001001 110000 0 14456788888888988888
Q ss_pred ccch
Q 021575 298 SDHK 301 (310)
Q Consensus 298 ~~~~ 301 (310)
++++
T Consensus 312 ~~i~ 315 (336)
T 1ypf_A 312 TKLD 315 (336)
T ss_dssp SBGG
T ss_pred ccHH
Confidence 8775
No 63
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=99.38 E-value=7.4e-12 Score=113.26 Aligned_cols=188 Identities=18% Similarity=0.158 Sum_probs=117.2
Q ss_pred HHHHHHHHcCCcEEEecc-CCcccccccCCCCCCCCHHHHHHHHhhcCcceeecccc--CcH---HHHHHHHHcCCCEEE
Q 021575 46 EQARVAEEAGACAVMALE-RVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARI--GHF---VEAQILEAIGIDYVD 119 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~-~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~--~~~---~~a~~~~~aGad~Vi 119 (310)
+..+.+.++|++.+ .+- |. .. ..|......++.++ ....+++.+... +.. .+++.+.++|.+.++
T Consensus 27 ~~~~~l~~~Gad~i-elg~pr---~~-~~g~~~~~~~~~l~----~~~~~~~pn~~~~~~~~~~~~f~~~a~~agg~~~i 97 (264)
T 1xm3_A 27 IQKEAVAVSESDIL-TFAVRR---MN-IFEASQPNFLEQLD----LSKYTLLPNTAGASTAEEAVRIARLAKASGLCDMI 97 (264)
T ss_dssp HHHHHHHHHTCSEE-EEETTS---ST-TC-------CTTCC----GGGSEEEEECTTCSSHHHHHHHHHHHHHTTCCSSE
T ss_pred HHHHHHHHcCCeEE-EEcccc---cc-cCCCCHHHHHHHHH----hcCCeEcCCccccCCHHHHHHHHHHHHHcCCCCeE
Confidence 45678888999977 442 10 00 00111111122222 234555555432 212 356777777554442
Q ss_pred ----eCCC-C---CchhHHHHHHhc-CCCCcEE-EecCCHHHHHHHHHhCCCEEEEcCC-CCCcchHHHHHHHHhhccce
Q 021575 120 ----ESEV-L---TPADEENHINKH-NFRIPFV-CGCRNLGEALRRIREGAAMIRTKGE-AGTGNIIEAVRHVRSVMGDI 188 (310)
Q Consensus 120 ----~~~~-~---~~~~~~~~i~~~-~~~i~~~-v~~~t~~ea~~~~~~Gad~V~v~g~-~~~~~~~~~~~~~r~~~~~~ 188 (310)
..+. . +..++.+.+++. +.++.++ ..+++.++++++.+.|+++|...+. .+++.
T Consensus 98 ~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~~vi~~~~~~~~~a~~~~~~gad~v~~~~~~~Gt~~--------------- 162 (264)
T 1xm3_A 98 KVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAIMPGASPIGSGQ--------------- 162 (264)
T ss_dssp EECCBCCTTTCCBCHHHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHTCSCBEECSSSTTCCC---------------
T ss_pred EEeecCCCcccccchHHHHHHHHHHHCCCeEEEEEcCCCHHHHHHHHHhCCCEEEECCcccCCCC---------------
Confidence 2322 1 123455555442 3365555 6678889999999999999844232 22110
Q ss_pred EeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHH
Q 021575 189 RVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAI 268 (310)
Q Consensus 189 ~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l 268 (310)
+ ....+.++++++..++||+ +.|||++++|+.+++++|||||+|||+|++++||...+++|
T Consensus 163 ----------------~-~~~~~~l~~i~~~~~iPvi--v~gGI~t~eda~~~~~~GAdgViVGSAi~~a~dp~~~~~~l 223 (264)
T 1xm3_A 163 ----------------G-ILNPLNLSFIIEQAKVPVI--VDAGIGSPKDAAYAMELGADGVLLNTAVSGADDPVKMARAM 223 (264)
T ss_dssp ----------------C-CSCHHHHHHHHHHCSSCBE--EESCCCSHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHH
T ss_pred ----------------C-CCCHHHHHHHHhcCCCCEE--EEeCCCCHHHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHH
Confidence 1 1125567777777789998 56999999999999999999999999999999999999999
Q ss_pred HHHHhccC
Q 021575 269 VRAVTHYS 276 (310)
Q Consensus 269 ~~~i~~~~ 276 (310)
++.++...
T Consensus 224 ~~~v~~~~ 231 (264)
T 1xm3_A 224 KLAVEAGR 231 (264)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99887543
No 64
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=99.36 E-value=1.6e-12 Score=118.04 Aligned_cols=196 Identities=16% Similarity=0.161 Sum_probs=120.6
Q ss_pred HHHHHHHHHcCCcEEEecc-CC-------ccccc----c-cCCCCCCCCHHHHHHHHhhcCcceeecccc------CcHH
Q 021575 45 PEQARVAEEAGACAVMALE-RV-------PADIR----S-QGGVARMSDPQLIKEIKQSVTIPVMAKARI------GHFV 105 (310)
Q Consensus 45 ~~~A~~~~~~Ga~~i~~L~-~~-------~~~~~----~-~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~------~~~~ 105 (310)
.+.++.++++ +|+| .|. |. |..++ + ..|.+....++.++++|+.+++|+++.... +...
T Consensus 33 ~~~~~~l~~~-aD~I-ElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~Pii~m~y~n~v~~~g~~~ 110 (271)
T 1ujp_A 33 LQAVEEVLPY-ADLL-EIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEKPLFLMTYLNPVLAWGPER 110 (271)
T ss_dssp HHHHHHHGGG-CSSE-EEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCSCEEEECCHHHHHHHCHHH
T ss_pred HHHHHHHHhc-CCEE-EECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEecCcHHHHhhHHH
Confidence 3678888888 9987 553 21 11111 0 123322223578899998889999984322 2346
Q ss_pred HHHHHHHcCCCEEEeCCC--CCchhHHHHHHhcCCC-CcEEEecCCHHHHHHHHHhCCCEEEEcC-CCCCcchHHHHHHH
Q 021575 106 EAQILEAIGIDYVDESEV--LTPADEENHINKHNFR-IPFVCGCRNLGEALRRIREGAAMIRTKG-EAGTGNIIEAVRHV 181 (310)
Q Consensus 106 ~a~~~~~aGad~Vi~~~~--~~~~~~~~~i~~~~~~-i~~~v~~~t~~ea~~~~~~Gad~V~v~g-~~~~~~~~~~~~~~ 181 (310)
+++.+.++|+|+++..+. .+..++.+.+++++.. +.++....+.+.+....+.+..++.+.. .+.||.-.
T Consensus 111 f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~~~gfiy~vs~~G~TG~~~------ 184 (271)
T 1ujp_A 111 FFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATGFVYAVSVTGVTGMRE------ 184 (271)
T ss_dssp HHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTTCCSCEEEECC--------------
T ss_pred HHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHhCCCCEEEEecCcccCCCC------
Confidence 788899999999986664 2355666777667665 4444445556655555555555443322 22233200
Q ss_pred HhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCH
Q 021575 182 RSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDP 261 (310)
Q Consensus 182 r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp 261 (310)
.......++++++++..++||+ ++|||+|++++.++ .|||||+|||+|++....
T Consensus 185 ----------------------~~~~~~~~~v~~vr~~~~~Pv~--vGfGI~t~e~a~~~--~~ADgVIVGSAi~~~~~~ 238 (271)
T 1ujp_A 185 ----------------------RLPEEVKDLVRRIKARTALPVA--VGFGVSGKATAAQA--AVADGVVVGSALVRALEE 238 (271)
T ss_dssp --------------------------CCHHHHHHHHTTCCSCEE--EESCCCSHHHHHHH--TTSSEEEECHHHHHHHHT
T ss_pred ----------------------CCCccHHHHHHHHHhhcCCCEE--EEcCCCCHHHHHHh--cCCCEEEEChHHhcccch
Confidence 0012346788999988899998 68999999999996 899999999999973210
Q ss_pred HHHHHHHHHHHhc
Q 021575 262 VKRAQAIVRAVTH 274 (310)
Q Consensus 262 ~~~a~~l~~~i~~ 274 (310)
...+++|.+.++.
T Consensus 239 ~~~~~~fv~~l~~ 251 (271)
T 1ujp_A 239 GRSLAPLLQEIRQ 251 (271)
T ss_dssp TCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 0134555555543
No 65
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=99.36 E-value=5.4e-11 Score=105.02 Aligned_cols=156 Identities=10% Similarity=0.120 Sum_probs=112.6
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhc-CcceeeccccCcHHHHHHHHHcCCCEEEeCCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSV-TIPVMAKARIGHFVEAQILEAIGIDYVDESEVL 124 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~-~iPv~vk~~~~~~~~a~~~~~aGad~Vi~~~~~ 124 (310)
+.++++.++|++.+ ++ +... ....+.++++++.+ ++.+.....+ ..++++.+.++|||+|+.+.
T Consensus 33 ~~~~al~~gGv~~i-el-------~~k~----~~~~~~i~~l~~~~~~l~vgaGtvl-~~d~~~~A~~aGAd~v~~p~-- 97 (224)
T 1vhc_A 33 PLADTLAKNGLSVA-EI-------TFRS----EAAADAIRLLRANRPDFLIAAGTVL-TAEQVVLAKSSGADFVVTPG-- 97 (224)
T ss_dssp HHHHHHHHTTCCEE-EE-------ETTS----TTHHHHHHHHHHHCTTCEEEEESCC-SHHHHHHHHHHTCSEEECSS--
T ss_pred HHHHHHHHcCCCEE-EE-------eccC----chHHHHHHHHHHhCcCcEEeeCcEe-eHHHHHHHHHCCCCEEEECC--
Confidence 67899999999976 66 2111 11146777787776 4444444432 45889999999999997442
Q ss_pred CchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhh
Q 021575 125 TPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAK 204 (310)
Q Consensus 125 ~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~ 204 (310)
...+..+..++ .+...+++++|..|+.++.+.|+|||++++...
T Consensus 98 ~d~~v~~~ar~--~g~~~i~Gv~t~~e~~~A~~~Gad~vk~Fpa~~---------------------------------- 141 (224)
T 1vhc_A 98 LNPKIVKLCQD--LNFPITPGVNNPMAIEIALEMGISAVKFFPAEA---------------------------------- 141 (224)
T ss_dssp CCHHHHHHHHH--TTCCEECEECSHHHHHHHHHTTCCEEEETTTTT----------------------------------
T ss_pred CCHHHHHHHHH--hCCCEEeccCCHHHHHHHHHCCCCEEEEeeCcc----------------------------------
Confidence 23444455544 566666779999999999999999999975210
Q ss_pred ccCCcHHHHHHHhhcC-CCCEEEeCCCCCCCHHHHHHHHHc-CCCEEEEccccccC
Q 021575 205 KIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQL-GCDGVFVGSGVFKS 258 (310)
Q Consensus 205 ~~~~~~~~i~~i~~~~-~iPVi~iA~GGI~t~~d~~~~l~~-GadgV~VGsai~~a 258 (310)
....+.++.++... ++|++ +.||| +++++.+++++ |+++|. ||+|+++
T Consensus 142 --~gG~~~lk~l~~~~~~ipvv--aiGGI-~~~N~~~~l~agga~~v~-gS~i~~~ 191 (224)
T 1vhc_A 142 --SGGVKMIKALLGPYAQLQIM--PTGGI-GLHNIRDYLAIPNIVACG-GSWFVEK 191 (224)
T ss_dssp --TTHHHHHHHHHTTTTTCEEE--EBSSC-CTTTHHHHHTSTTBCCEE-ECGGGCH
T ss_pred --ccCHHHHHHHHhhCCCCeEE--EECCc-CHHHHHHHHhcCCCEEEE-EchhcCc
Confidence 01144567777655 79998 66999 69999999998 999999 9999974
No 66
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=99.36 E-value=5.5e-12 Score=111.71 Aligned_cols=187 Identities=14% Similarity=0.117 Sum_probs=122.8
Q ss_pred HHHHHHHHcCCcEEEecc-----CCcccccccCCCCCCCCHHHHHHHHhh--cCcceeeccccC-cHHHHHHHHHcCCCE
Q 021575 46 EQARVAEEAGACAVMALE-----RVPADIRSQGGVARMSDPQLIKEIKQS--VTIPVMAKARIG-HFVEAQILEAIGIDY 117 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~-----~~~~~~~~~~G~~~~~~~~~i~~i~~~--~~iPv~vk~~~~-~~~~a~~~~~aGad~ 117 (310)
+..+.+.++|++++ +++ -.|.. .+| ++.++.+|+. .++|+-+...+. ....++.+.++|+|.
T Consensus 21 ~~i~~l~~~g~d~~-h~DVmDg~Fvpn~--~~G-------~~~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~~~~aGad~ 90 (228)
T 3ovp_A 21 AECLRMLDSGADYL-HLDVMDGHFVPNI--TFG-------HPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQ 90 (228)
T ss_dssp HHHHHHHHTTCSCE-EEEEEBSSSSSCB--CBC-------HHHHHHHHHHHCSSSCEEEEEECSCGGGGHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCEE-EEEecCCCcCccc--ccC-------HHHHHHHHHhhCCCCcEEEEEEeCCHHHHHHHHHHcCCCE
Confidence 67778899999987 443 11111 133 7899999988 488988876554 234567888999999
Q ss_pred EE-eCCC-CCchhHHHHHHhcCCCCcEEEec--CCHHHHHHHHHhCCCEEEEcC--CCCCcchHHHHHHHHhhccceEee
Q 021575 118 VD-ESEV-LTPADEENHINKHNFRIPFVCGC--RNLGEALRRIREGAAMIRTKG--EAGTGNIIEAVRHVRSVMGDIRVL 191 (310)
Q Consensus 118 Vi-~~~~-~~~~~~~~~i~~~~~~i~~~v~~--~t~~ea~~~~~~Gad~V~v~g--~~~~~~~~~~~~~~r~~~~~~~~l 191 (310)
|. .... .......+.++++ ++.+++.+ .|..+........+|+|.+.. +++++-
T Consensus 91 itvH~Ea~~~~~~~i~~i~~~--G~k~gval~p~t~~e~l~~~l~~~D~Vl~msv~pGf~Gq------------------ 150 (228)
T 3ovp_A 91 YTFHLEATENPGALIKDIREN--GMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQ------------------ 150 (228)
T ss_dssp EEEEGGGCSCHHHHHHHHHHT--TCEEEEEECTTSCGGGTGGGGGGCSEEEEESSCTTTCSC------------------
T ss_pred EEEccCCchhHHHHHHHHHHc--CCCEEEEEcCCCCHHHHHHHhccCCeEEEeeecCCCCCc------------------
Confidence 95 2222 2345566666554 44444443 344333332223478776532 222221
Q ss_pred cccChhHHHHhhhccCCcHHHHHHHhhcC-CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHH
Q 021575 192 RNMDDDEVFTFAKKIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVR 270 (310)
Q Consensus 192 ~~~~~d~~~~~~~~~~~~~~~i~~i~~~~-~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~ 270 (310)
. -....++.++++++.. ++|+. ..||| +++++.++.++|||.+++||+|++++||...+++|++
T Consensus 151 -~-----------f~~~~l~ki~~lr~~~~~~~I~--VdGGI-~~~t~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~ 215 (228)
T 3ovp_A 151 -K-----------FMEDMMPKVHWLRTQFPSLDIE--VDGGV-GPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 215 (228)
T ss_dssp -C-----------CCGGGHHHHHHHHHHCTTCEEE--EESSC-STTTHHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHH
T ss_pred -c-----------cCHHHHHHHHHHHHhcCCCCEE--EeCCc-CHHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHH
Confidence 0 0112245566666543 57777 46999 5999999999999999999999999999999999998
Q ss_pred HHhccCC
Q 021575 271 AVTHYSD 277 (310)
Q Consensus 271 ~i~~~~~ 277 (310)
.++++..
T Consensus 216 ~~~~~~~ 222 (228)
T 3ovp_A 216 VCSEAAQ 222 (228)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8876643
No 67
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=99.35 E-value=6.2e-12 Score=109.17 Aligned_cols=154 Identities=21% Similarity=0.225 Sum_probs=103.1
Q ss_pred HHHHHHHHhhc-CcceeeccccCc--HHHHHHHHHcCCCEEEeCCCC---CchhHHHHHHhcCCCCcEEEecC---CHHH
Q 021575 81 PQLIKEIKQSV-TIPVMAKARIGH--FVEAQILEAIGIDYVDESEVL---TPADEENHINKHNFRIPFVCGCR---NLGE 151 (310)
Q Consensus 81 ~~~i~~i~~~~-~iPv~vk~~~~~--~~~a~~~~~aGad~Vi~~~~~---~~~~~~~~i~~~~~~i~~~v~~~---t~~e 151 (310)
++.++++++.+ +.|+.+.....+ ...++.+.++|||+|..+... ...++.+.++++ ++.+++++. |+.+
T Consensus 41 ~~~i~~l~~~~~~~~i~~~l~~~di~~~~~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~--g~~~gv~~~s~~~p~~ 118 (207)
T 3ajx_A 41 LSVITAVKKAHPDKIVFADMKTMDAGELEADIAFKAGADLVTVLGSADDSTIAGAVKAAQAH--NKGVVVDLIGIEDKAT 118 (207)
T ss_dssp THHHHHHHHHSTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHH--TCEEEEECTTCSSHHH
T ss_pred HHHHHHHHHhCCCCeEEEEEEecCccHHHHHHHHhCCCCEEEEeccCChHHHHHHHHHHHHc--CCceEEEEecCCChHH
Confidence 67899998887 889887443332 344788999999999643322 233444555443 444556554 6666
Q ss_pred -HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcH-HHHHHHhhcCCCCEEEeCC
Q 021575 152 -ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY-DLVMQTKQLGRLPVVHFAA 229 (310)
Q Consensus 152 -a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~-~~i~~i~~~~~iPVi~iA~ 229 (310)
+..+.+.|+|+|+++.. .++. .....+. +.++++++. ++|++ +.
T Consensus 119 ~~~~~~~~g~d~v~~~~~-~~~~------------------------------~~g~~~~~~~i~~~~~~-~~pi~--v~ 164 (207)
T 3ajx_A 119 RAQEVRALGAKFVEMHAG-LDEQ------------------------------AKPGFDLNGLLAAGEKA-RVPFS--VA 164 (207)
T ss_dssp HHHHHHHTTCSEEEEECC-HHHH------------------------------TSTTCCTHHHHHHHHHH-TSCEE--EE
T ss_pred HHHHHHHhCCCEEEEEec-cccc------------------------------ccCCCchHHHHHHhhCC-CCCEE--EE
Confidence 55566779999965531 1000 0001112 444444432 68998 56
Q ss_pred CCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHH
Q 021575 230 GGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRA 271 (310)
Q Consensus 230 GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~ 271 (310)
|||+ ++++.+++++|||+++|||+|++++||...+++|++.
T Consensus 165 GGI~-~~~~~~~~~aGad~vvvGsaI~~~~dp~~~~~~~~~~ 205 (207)
T 3ajx_A 165 GGVK-VATIPAVQKAGAEVAVAGGAIYGAADPAAAAKELRAA 205 (207)
T ss_dssp SSCC-GGGHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHT
T ss_pred CCcC-HHHHHHHHHcCCCEEEEeeeccCCCCHHHHHHHHHHH
Confidence 9995 9999999999999999999999999999998888654
No 68
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=99.33 E-value=4.4e-11 Score=104.90 Aligned_cols=156 Identities=13% Similarity=0.110 Sum_probs=113.2
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcC-cceeeccccCcHHHHHHHHHcCCCEEEeCCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVT-IPVMAKARIGHFVEAQILEAIGIDYVDESEVL 124 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~-iPv~vk~~~~~~~~a~~~~~aGad~Vi~~~~~ 124 (310)
+.++++.++|++.+ ++ +... ....+.++++++.+. +.+..+. +-..++++.+.++|||+|+.+.
T Consensus 32 ~~~~al~~gGv~~i-el-------~~k~----~~~~~~i~~l~~~~~~~~vgagt-vi~~d~~~~A~~aGAd~v~~p~-- 96 (214)
T 1wbh_A 32 PMAKALVAGGVRVL-NV-------TLRT----ECAVDAIRAIAKEVPEAIVGAGT-VLNPQQLAEVTEAGAQFAISPG-- 96 (214)
T ss_dssp HHHHHHHHTTCCEE-EE-------ESCS----TTHHHHHHHHHHHCTTSEEEEES-CCSHHHHHHHHHHTCSCEEESS--
T ss_pred HHHHHHHHcCCCEE-EE-------eCCC----hhHHHHHHHHHHHCcCCEEeeCE-EEEHHHHHHHHHcCCCEEEcCC--
Confidence 67899999999976 66 2111 111467777877763 3344443 3345889999999999997443
Q ss_pred CchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhh
Q 021575 125 TPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAK 204 (310)
Q Consensus 125 ~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~ 204 (310)
...++.+..+. .++..+.+++|..|+.++.+.|+|||++++...
T Consensus 97 ~d~~v~~~~~~--~g~~~i~G~~t~~e~~~A~~~Gad~v~~Fpa~~---------------------------------- 140 (214)
T 1wbh_A 97 LTEPLLKAATE--GTIPLIPGISTVSELMLGMDYGLKEFKFFPAEA---------------------------------- 140 (214)
T ss_dssp CCHHHHHHHHH--SSSCEEEEESSHHHHHHHHHTTCCEEEETTTTT----------------------------------
T ss_pred CCHHHHHHHHH--hCCCEEEecCCHHHHHHHHHCCCCEEEEecCcc----------------------------------
Confidence 34455555544 456677789999999999999999999975210
Q ss_pred ccCCcHHHHHHHhhcC-CCCEEEeCCCCCCCHHHHHHHHHc-CCCEEEEccccccC
Q 021575 205 KIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQL-GCDGVFVGSGVFKS 258 (310)
Q Consensus 205 ~~~~~~~~i~~i~~~~-~iPVi~iA~GGI~t~~d~~~~l~~-GadgV~VGsai~~a 258 (310)
....+.++.++... ++|++ +.||| +++++.+++++ |+++|. ||+|+++
T Consensus 141 --~gG~~~lk~i~~~~~~ipvv--aiGGI-~~~n~~~~l~agg~~~v~-gS~i~~~ 190 (214)
T 1wbh_A 141 --NGGVKALQAIAGPFSQVRFC--PTGGI-SPANYRDYLALKSVLCIG-GSWLVPA 190 (214)
T ss_dssp --TTHHHHHHHHHTTCTTCEEE--EBSSC-CTTTHHHHHTSTTBSCEE-EGGGSCH
T ss_pred --ccCHHHHHHHhhhCCCCeEE--EECCC-CHHHHHHHHhcCCCeEEE-eccccCh
Confidence 01145677777655 79998 66999 69999999998 999999 9999974
No 69
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=99.33 E-value=2.9e-11 Score=109.46 Aligned_cols=182 Identities=21% Similarity=0.264 Sum_probs=119.4
Q ss_pred cccccCCCH-HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHh--hcCcceeeccccCc----------
Q 021575 37 GVIMDVVTP-EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQ--SVTIPVMAKARIGH---------- 103 (310)
Q Consensus 37 g~i~~~~~~-~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~--~~~iPv~vk~~~~~---------- 103 (310)
+.+.+..++ ..++.+.+.|+++++ .++ ..++.+++ ..++|++++...+.
T Consensus 39 ~p~~~~~~~~~~~~~~~~~g~~~i~-~~~-----------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~ 100 (273)
T 2qjg_A 39 GPIKGLIDIRKTVNDVAEGGANAVL-LHK-----------------GIVRHGHRGYGKDVGLIIHLSGGTAISPNPLKKV 100 (273)
T ss_dssp CSCTTSSSHHHHHHHHHHHTCSEEE-ECH-----------------HHHHSCCCSSSCCCEEEEECEECCTTSSSTTCCE
T ss_pred CCCcchhhHHHHHHHHHhcCCCEEE-eCH-----------------HHHHHHHHhhcCCCCEEEEEcCCCcCCCCcccch
Confidence 345556666 578899999999873 221 11111111 12567666432211
Q ss_pred -HHHHHHHHHcCCCEE--E-eCCCCCch-------hHHHHHHhcCCCCcEEEec-------------CCHHHH-HHHHHh
Q 021575 104 -FVEAQILEAIGIDYV--D-ESEVLTPA-------DEENHINKHNFRIPFVCGC-------------RNLGEA-LRRIRE 158 (310)
Q Consensus 104 -~~~a~~~~~aGad~V--i-~~~~~~~~-------~~~~~i~~~~~~i~~~v~~-------------~t~~ea-~~~~~~ 158 (310)
.+.++.+.++|+|.| . .....+.. ++.+.+++ .++++++.+ ++.+++ +.+.+.
T Consensus 101 ~~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~--~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~ 178 (273)
T 2qjg_A 101 IVTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEY--WGMPLIAMMYPRGKHIQNERDPELVAHAARLGAEL 178 (273)
T ss_dssp ECSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHH--HTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHH--cCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHc
Confidence 456788999999999 3 22223322 22333332 355555443 333555 667789
Q ss_pred CCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCC--HH
Q 021575 159 GAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVAT--PA 236 (310)
Q Consensus 159 Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t--~~ 236 (310)
|+|+|.++.. .+++.++++++..++|++ +.|||++ .+
T Consensus 179 Gad~i~~~~~---------------------------------------~~~~~l~~i~~~~~ipvv--a~GGi~~~~~~ 217 (273)
T 2qjg_A 179 GADIVKTSYT---------------------------------------GDIDSFRDVVKGCPAPVV--VAGGPKTNTDE 217 (273)
T ss_dssp TCSEEEECCC---------------------------------------SSHHHHHHHHHHCSSCEE--EECCSCCSSHH
T ss_pred CCCEEEECCC---------------------------------------CCHHHHHHHHHhCCCCEE--EEeCCCCCCHH
Confidence 9999998631 124556667766789998 6799984 67
Q ss_pred H----HHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhccCChh
Q 021575 237 D----AAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHYSDPE 279 (310)
Q Consensus 237 d----~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~~~~~ 279 (310)
| +.+++++|++||.+||+|++++||...++++.+.++.....+
T Consensus 218 ~~~~~~~~~~~~Ga~gv~vg~~i~~~~~~~~~~~~l~~~~~~~~~~~ 264 (273)
T 2qjg_A 218 EFLQMIKDAMEAGAAGVAVGRNIFQHDDVVGITRAVCKIVHENADVE 264 (273)
T ss_dssp HHHHHHHHHHHHTCSEEECCHHHHTSSSHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHHHHcCCcEEEeeHHhhCCCCHHHHHHHHHHHHhcCCCHH
Confidence 7 666678999999999999999999999999999998766544
No 70
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=99.33 E-value=1.5e-11 Score=109.83 Aligned_cols=185 Identities=16% Similarity=0.177 Sum_probs=120.8
Q ss_pred HHHHHHHHcCCcEE-Eec-c--CCcccccccCCCCCCCCHHHHHHHHhhc-CcceeeccccC-cHHHHHHHHHcCCCEEE
Q 021575 46 EQARVAEEAGACAV-MAL-E--RVPADIRSQGGVARMSDPQLIKEIKQSV-TIPVMAKARIG-HFVEAQILEAIGIDYVD 119 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i-~~L-~--~~~~~~~~~~G~~~~~~~~~i~~i~~~~-~iPv~vk~~~~-~~~~a~~~~~aGad~Vi 119 (310)
+..+.+.++|++++ +++ + -.|.. .+| +..++.+|+.+ ++|+-+.+-+. ....++.+.++|||.+.
T Consensus 44 ~~i~~l~~~G~d~lHvDVmDg~FVpni--t~G-------~~~v~~lr~~~p~~~ldvHLmv~~p~~~i~~~~~aGAd~it 114 (246)
T 3inp_A 44 DDVKAVLAAGADNIHFDVMDNHYVPNL--TFG-------PMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIV 114 (246)
T ss_dssp HHHHHHHHTTCCCEEEEEEBSSSSSCB--CCC-------HHHHHHHHHHTCCSCEEEEEECSSCHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcch--hcC-------HHHHHHHHHhCCCCeEEEEEeeCCHHHHHHHHHHcCCCEEE
Confidence 67888899999998 333 1 11211 223 78999999988 99999876654 34567888999999996
Q ss_pred eC-CC-CCchhHHHHHHhcCCCCcEEEec--CCHHHHHHHHHhCCCEEEEcC--CCCCcchHHHHHHHHhhccceEeecc
Q 021575 120 ES-EV-LTPADEENHINKHNFRIPFVCGC--RNLGEALRRIREGAAMIRTKG--EAGTGNIIEAVRHVRSVMGDIRVLRN 193 (310)
Q Consensus 120 ~~-~~-~~~~~~~~~i~~~~~~i~~~v~~--~t~~ea~~~~~~Gad~V~v~g--~~~~~~~~~~~~~~r~~~~~~~~l~~ 193 (310)
.. .. ..+....+.+++ .++.+++.. .|..+..+.....+|+|.+.. +++++-
T Consensus 115 vH~Ea~~~~~~~i~~ir~--~G~k~Gvalnp~Tp~e~l~~~l~~vD~VlvMsV~PGfgGQ-------------------- 172 (246)
T 3inp_A 115 FHPEASEHIDRSLQLIKS--FGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGFGGQ-------------------- 172 (246)
T ss_dssp ECGGGCSCHHHHHHHHHT--TTSEEEEEECTTCCSGGGTTTGGGCSEEEEECSCTTC--C--------------------
T ss_pred EccccchhHHHHHHHHHH--cCCeEEEEecCCCCHHHHHHHHhcCCEEEEeeecCCCCCc--------------------
Confidence 32 22 234455666654 454555543 354444333333688876542 222210
Q ss_pred cChhHHHHhhhccCCcHHHHHHHhhc-----CCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHH
Q 021575 194 MDDDEVFTFAKKIAAPYDLVMQTKQL-----GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAI 268 (310)
Q Consensus 194 ~~~d~~~~~~~~~~~~~~~i~~i~~~-----~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l 268 (310)
+-....++-++++++. .++++. ..||| +++++.++.++|||.+++||+|++++||...+++|
T Consensus 173 ----------~fi~~~l~KI~~lr~~~~~~~~~~~I~--VDGGI-~~~ti~~~~~aGAD~~V~GSaIf~a~dp~~~i~~l 239 (246)
T 3inp_A 173 ----------KFIPAMLDKAKEISKWISSTDRDILLE--IDGGV-NPYNIAEIAVCGVNAFVAGSAIFNSDSYKQTIDKM 239 (246)
T ss_dssp ----------CCCTTHHHHHHHHHHHHHHHTSCCEEE--EESSC-CTTTHHHHHTTTCCEEEESHHHHTSSCHHHHHHHH
T ss_pred ----------ccchHHHHHHHHHHHHHHhcCCCeeEE--EECCc-CHHHHHHHHHcCCCEEEEehHHhCCCCHHHHHHHH
Confidence 0012224444444432 357777 46999 59999999999999999999999999999999988
Q ss_pred HHHHhc
Q 021575 269 VRAVTH 274 (310)
Q Consensus 269 ~~~i~~ 274 (310)
++.+.+
T Consensus 240 ~~~i~~ 245 (246)
T 3inp_A 240 RDELNK 245 (246)
T ss_dssp HHHHHT
T ss_pred HHHHhh
Confidence 887653
No 71
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.32 E-value=8.2e-12 Score=115.27 Aligned_cols=78 Identities=15% Similarity=0.207 Sum_probs=67.4
Q ss_pred HHHHHHHhhcC--CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhccCChhhhhhhhhh
Q 021575 210 YDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHYSDPEVLAEVSCG 287 (310)
Q Consensus 210 ~~~i~~i~~~~--~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~~~~~~~~~~~~~ 287 (310)
++.++++++.. ++||+ ++|||+|++|+.+++.+|||+|++||+++. .+|+ ..+++.+.++.++...++.++++.
T Consensus 229 ~~~i~~v~~~~~~~ipvi--~~GGI~~~~da~~~l~~GAd~V~vg~~~l~-~~p~-~~~~i~~~l~~~l~~~g~~si~e~ 304 (311)
T 1jub_A 229 LANVRAFYTRLKPEIQII--GTGGIETGQDAFEHLLCGATMLQIGTALHK-EGPA-IFDRIIKELEEIMNQKGYQSIADF 304 (311)
T ss_dssp HHHHHHHHTTSCTTSEEE--EESSCCSHHHHHHHHHHTCSEEEECHHHHH-HCTH-HHHHHHHHHHHHHHHHTCCSGGGT
T ss_pred HHHHHHHHHhcCCCCCEE--EECCCCCHHHHHHHHHcCCCEEEEchHHHh-cCcH-HHHHHHHHHHHHHHHcCCCCHHHH
Confidence 56788888877 89998 789999999999999999999999999995 3675 556688889999988889999998
Q ss_pred cccc
Q 021575 288 LGEA 291 (310)
Q Consensus 288 ~~~~ 291 (310)
.|..
T Consensus 305 ~g~~ 308 (311)
T 1jub_A 305 HGKL 308 (311)
T ss_dssp TTCC
T ss_pred hChh
Confidence 8754
No 72
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=99.30 E-value=1.7e-11 Score=109.02 Aligned_cols=182 Identities=18% Similarity=0.193 Sum_probs=115.9
Q ss_pred cccccCCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCC
Q 021575 37 GVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGID 116 (310)
Q Consensus 37 g~i~~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad 116 (310)
|+-..-.+.+.++.++++|+|.+ .+. -..|.+....++.++++|+ +++|+++..... .. ..+|+|
T Consensus 15 gDP~~~~t~~~~~~l~~~GaD~i-elG-------~S~Gvt~~~~~~~v~~ir~-~~~Pivlm~y~~--n~----i~~G~d 79 (240)
T 1viz_A 15 LDPNKDLPDEQLEILCESGTDAV-IIG-------GSDGVTEDNVLRMMSKVRR-FLVPCVLEVSAI--EA----IVPGFD 79 (240)
T ss_dssp ECTTSCCCHHHHHHHHTSCCSEE-EEC-------C----CHHHHHHHHHHHTT-SSSCEEEECSCG--GG----CCSCCS
T ss_pred eCCCccccHHHHHHHHHcCCCEE-EEC-------CCCCCCHHHHHHHHHHhhC-cCCCEEEecCcc--cc----ccCCCC
Confidence 44333456688999999999987 542 1123333334678888988 899999865542 11 178999
Q ss_pred EEEeCCCCC--chhH-----HHHHHhcC-----CCCcE----EEecC-------------CHHHHHHHHHhCC----CEE
Q 021575 117 YVDESEVLT--PADE-----ENHINKHN-----FRIPF----VCGCR-------------NLGEALRRIREGA----AMI 163 (310)
Q Consensus 117 ~Vi~~~~~~--~~~~-----~~~i~~~~-----~~i~~----~v~~~-------------t~~ea~~~~~~Ga----d~V 163 (310)
+++.++... ..++ ...+++++ ..... ++... +.+.+.+..+.|. .+|
T Consensus 80 g~iiPdLp~ee~~~~~~g~~~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~d~~~~~~~~~~~a~~g~~~~~~~V 159 (240)
T 1viz_A 80 LYFIPSVLNSKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIF 159 (240)
T ss_dssp EEEEEEETTBSSGGGTTHHHHHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEE
T ss_pred EEEEcccCcccChhhhcchhHHHHHHcCCCCcceeeeecccEEECCCCceEEeeccCCCCCHHHHHHHHHhCcccCCCEE
Confidence 998665422 3344 45565555 44333 32222 2234444444332 344
Q ss_pred EEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcC-CCCEEEeCCCCCCCHHHHHHHH
Q 021575 164 RTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMM 242 (310)
Q Consensus 164 ~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~-~iPVi~iA~GGI~t~~d~~~~l 242 (310)
.+-+ . +.....++++++++.. ++|++ .+|||+|++++.+++
T Consensus 160 Yl~s-~-----------------------------------G~~~~~~~i~~i~~~~~~~Pv~--vGgGI~t~e~a~~~~ 201 (240)
T 1viz_A 160 YLEY-S-----------------------------------GVLGDIEAVKKTKAVLETSTLF--YGGGIKDAETAKQYA 201 (240)
T ss_dssp EEEC-T-----------------------------------TSCCCHHHHHHHHHTCSSSEEE--EESSCCSHHHHHHHH
T ss_pred EEeC-C-----------------------------------CccChHHHHHHHHHhcCCCCEE--EEeccCCHHHHHHHH
Confidence 3322 1 1234577899999888 89998 689999999999988
Q ss_pred HcCCCEEEEccccccCCCHHHHHHHHHHHHhcc
Q 021575 243 QLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHY 275 (310)
Q Consensus 243 ~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~ 275 (310)
+ |||+|+|||++++ +|....++ ++++++.
T Consensus 202 ~-gAd~VIVGSa~v~--~~~~~~~~-v~~~~~~ 230 (240)
T 1viz_A 202 E-HADVIVVGNAVYE--DFDRALKT-VAAVKGE 230 (240)
T ss_dssp T-TCSEEEECTHHHH--CHHHHHTH-HHHHHCC
T ss_pred h-CCCEEEEChHHHh--CHHHHHHH-HHHHHhc
Confidence 8 9999999999998 77645555 5556543
No 73
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=99.30 E-value=2.3e-11 Score=107.92 Aligned_cols=184 Identities=18% Similarity=0.187 Sum_probs=120.0
Q ss_pred HHHHHHHHcCCcEE-Eec-cC--CcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCc-HHHHHHHHHcCCCEEEe
Q 021575 46 EQARVAEEAGACAV-MAL-ER--VPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGH-FVEAQILEAIGIDYVDE 120 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i-~~L-~~--~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~-~~~a~~~~~aGad~Vi~ 120 (310)
+..+.+ ++|++++ +++ +. .|. -.++ +..++.+|+.++.|+-+.+-+.+ ...++.+.++|||.+..
T Consensus 17 ~~i~~~-~~gad~lHvDvmDG~fvpn--~t~G-------~~~v~~lr~~~~~~~dvhLmv~dp~~~i~~~~~aGAd~itv 86 (231)
T 3ctl_A 17 EQIEFI-DSHADYFHIDIMDGHFVPN--LTLS-------PFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAGADFITL 86 (231)
T ss_dssp HHHHHH-HTTCSCEEEEEECSSSSSC--CCBC-------HHHHHHHHTTCCSCEEEEEESSCGGGTHHHHHHHTCSEEEE
T ss_pred HHHHHH-HcCCCEEEEEEEeCccCcc--chhc-------HHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEE
Confidence 566677 9999997 332 11 121 1223 78999999988899888765532 33468899999999962
Q ss_pred C-CC--CCchhHHHHHHhcCCCCcEEEe--cCCHHHHHHHHHhCCCEEEEcCC--CCCcchHHHHHHHHhhccceEeecc
Q 021575 121 S-EV--LTPADEENHINKHNFRIPFVCG--CRNLGEALRRIREGAAMIRTKGE--AGTGNIIEAVRHVRSVMGDIRVLRN 193 (310)
Q Consensus 121 ~-~~--~~~~~~~~~i~~~~~~i~~~v~--~~t~~ea~~~~~~Gad~V~v~g~--~~~~~~~~~~~~~r~~~~~~~~l~~ 193 (310)
. .. ..+....+.++++ ++.+++. ..|+.+..+....++|+|.+... ++++-
T Consensus 87 h~Ea~~~~~~~~i~~i~~~--G~k~gv~lnp~tp~~~~~~~l~~~D~VlvmsV~pGfggQ-------------------- 144 (231)
T 3ctl_A 87 HPETINGQAFRLIDEIRRH--DMKVGLILNPETPVEAMKYYIHKADKITVMTVDPGFAGQ-------------------- 144 (231)
T ss_dssp CGGGCTTTHHHHHHHHHHT--TCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCTTCSSC--------------------
T ss_pred CcccCCccHHHHHHHHHHc--CCeEEEEEECCCcHHHHHHHHhcCCEEEEeeeccCcCCc--------------------
Confidence 2 12 2345566666554 4444444 44655555444458898864321 22220
Q ss_pred cChhHHHHhhhccCCcHHHHHHHhhc-----CCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEc-cccccCCC-HHHHHH
Q 021575 194 MDDDEVFTFAKKIAAPYDLVMQTKQL-----GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVG-SGVFKSGD-PVKRAQ 266 (310)
Q Consensus 194 ~~~d~~~~~~~~~~~~~~~i~~i~~~-----~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VG-sai~~a~d-p~~~a~ 266 (310)
+-....++.++++++. .++++. +.||| +++++.++.++|||.+++| |+|++++| |...++
T Consensus 145 ----------~f~~~~l~kI~~lr~~~~~~~~~~~I~--VdGGI-~~~~~~~~~~aGAd~~V~G~saif~~~d~~~~~~~ 211 (231)
T 3ctl_A 145 ----------PFIPEMLDKLAELKAWREREGLEYEIE--VDGSC-NQATYEKLMAAGADVFIVGTSGLFNHAENIDEAWR 211 (231)
T ss_dssp ----------CCCTTHHHHHHHHHHHHHHHTCCCEEE--EESCC-STTTHHHHHHHTCCEEEECTTTTGGGCSSHHHHHH
T ss_pred ----------cccHHHHHHHHHHHHHHhccCCCceEE--EECCc-CHHHHHHHHHcCCCEEEEccHHHhCCCCcHHHHHH
Confidence 0011223444444433 257777 57999 5999999999999999999 99999889 999999
Q ss_pred HHHHHHhc
Q 021575 267 AIVRAVTH 274 (310)
Q Consensus 267 ~l~~~i~~ 274 (310)
+|++.++.
T Consensus 212 ~l~~~~~~ 219 (231)
T 3ctl_A 212 IMTAQILA 219 (231)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHH
Confidence 99887764
No 74
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=99.30 E-value=9.1e-11 Score=103.62 Aligned_cols=156 Identities=15% Similarity=0.104 Sum_probs=111.9
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhc-CcceeeccccCcHHHHHHHHHcCCCEEEeCCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSV-TIPVMAKARIGHFVEAQILEAIGIDYVDESEVL 124 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~-~iPv~vk~~~~~~~~a~~~~~aGad~Vi~~~~~ 124 (310)
+.++++.++|++.+ ++ +... ....+.++++++.+ ++.+..+..+ ..++++.+.++|||+|+...
T Consensus 42 ~~~~al~~gGv~~i-el-------~~k~----~~~~~~i~~l~~~~~~~~igagtvl-~~d~~~~A~~aGAd~v~~p~-- 106 (225)
T 1mxs_A 42 PLADALAAGGIRTL-EV-------TLRS----QHGLKAIQVLREQRPELCVGAGTVL-DRSMFAAVEAAGAQFVVTPG-- 106 (225)
T ss_dssp HHHHHHHHTTCCEE-EE-------ESSS----THHHHHHHHHHHHCTTSEEEEECCC-SHHHHHHHHHHTCSSEECSS--
T ss_pred HHHHHHHHCCCCEE-EE-------ecCC----ccHHHHHHHHHHhCcccEEeeCeEe-eHHHHHHHHHCCCCEEEeCC--
Confidence 68999999999976 66 2111 11145677777766 4444444432 45889999999999997442
Q ss_pred CchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhh
Q 021575 125 TPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAK 204 (310)
Q Consensus 125 ~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~ 204 (310)
...++.+..+. .++..+++++|+.|+.++.+.|+|||++++..
T Consensus 107 ~d~~v~~~~~~--~g~~~i~G~~t~~e~~~A~~~Gad~vk~FPa~----------------------------------- 149 (225)
T 1mxs_A 107 ITEDILEAGVD--SEIPLLPGISTPSEIMMGYALGYRRFKLFPAE----------------------------------- 149 (225)
T ss_dssp CCHHHHHHHHH--CSSCEECEECSHHHHHHHHTTTCCEEEETTHH-----------------------------------
T ss_pred CCHHHHHHHHH--hCCCEEEeeCCHHHHHHHHHCCCCEEEEccCc-----------------------------------
Confidence 23455555444 45666777999999999999999999996410
Q ss_pred ccCCcHHHHHHHhhcC-CCCEEEeCCCCCCCHHHHHHHHH-cCCCEEEEccccccC
Q 021575 205 KIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVGSGVFKS 258 (310)
Q Consensus 205 ~~~~~~~~i~~i~~~~-~iPVi~iA~GGI~t~~d~~~~l~-~GadgV~VGsai~~a 258 (310)
.....+.++.++... ++|++ +.||| +++++.++++ .|+++|. ||+|+++
T Consensus 150 -~~~G~~~lk~i~~~~~~ipvv--aiGGI-~~~N~~~~l~~~Ga~~v~-gSai~~~ 200 (225)
T 1mxs_A 150 -ISGGVAAIKAFGGPFGDIRFC--PTGGV-NPANVRNYMALPNVMCVG-TTWMLDS 200 (225)
T ss_dssp -HHTHHHHHHHHHTTTTTCEEE--EBSSC-CTTTHHHHHHSTTBCCEE-ECTTSCH
T ss_pred -cccCHHHHHHHHhhCCCCeEE--EECCC-CHHHHHHHHhccCCEEEE-EchhcCc
Confidence 000144567777655 79998 66999 6999999999 6999999 9999973
No 75
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.27 E-value=1.7e-11 Score=115.03 Aligned_cols=79 Identities=13% Similarity=0.082 Sum_probs=55.1
Q ss_pred cHHHHHHHhhcC-CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCC---CH---HHHHHHHHHHHhccCChhhh
Q 021575 209 PYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG---DP---VKRAQAIVRAVTHYSDPEVL 281 (310)
Q Consensus 209 ~~~~i~~i~~~~-~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~---dp---~~~a~~l~~~i~~~~~~~~~ 281 (310)
..+.+.++++.. ++||+ ++|||++++|+.+++.+|||+|++|++++... .+ ....+.+.+.++..+...++
T Consensus 238 ~~~~l~~v~~~~~~ipvi--a~GGI~~~~d~~k~l~~GAd~V~iG~~~l~~~~~~g~~~~~~~~~~~~~~l~~~m~~~G~ 315 (349)
T 1p0k_A 238 TAASLAEIRSEFPASTMI--ASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEGLLEEIQLILEELKLIMTVLGA 315 (349)
T ss_dssp HHHHHHHHHHHCTTSEEE--EESSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcCCCeEE--EECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 455666676654 79998 78999999999999999999999999999741 12 13344555555555544444
Q ss_pred hhhhhhcc
Q 021575 282 AEVSCGLG 289 (310)
Q Consensus 282 ~~~~~~~~ 289 (310)
.++++..+
T Consensus 316 ~~i~el~~ 323 (349)
T 1p0k_A 316 RTIADLQK 323 (349)
T ss_dssp CBHHHHTT
T ss_pred CCHHHHhh
Confidence 45554443
No 76
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=99.27 E-value=6.2e-11 Score=104.50 Aligned_cols=165 Identities=19% Similarity=0.294 Sum_probs=120.8
Q ss_pred HHHHHHHHhhcCcceeeccccCcHHH---------HHHHHHcCCCEEE-eCCC--CCchhHHHHHHh-cCCCCcEEEecC
Q 021575 81 PQLIKEIKQSVTIPVMAKARIGHFVE---------AQILEAIGIDYVD-ESEV--LTPADEENHINK-HNFRIPFVCGCR 147 (310)
Q Consensus 81 ~~~i~~i~~~~~iPv~vk~~~~~~~~---------a~~~~~aGad~Vi-~~~~--~~~~~~~~~i~~-~~~~i~~~v~~~ 147 (310)
+..+..+++.+++|+..++. . ..+ +..+.+.|||.|+ ++.- ....++.+.++. ...++.++++++
T Consensus 45 ~~~L~~v~~~~~i~v~aQdv-~-~~~~Ga~TGeis~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVg 122 (226)
T 1w0m_A 45 HLELGLVSQSVDIPVYAQGA-D-VEAGGAHTAHVSLENIKEAGGSGVILNHSEAPLKLNDLARLVAKAKSLGLDVVVCAP 122 (226)
T ss_dssp GGGHHHHHTTCSSCBEESCC-S-BSSCSSCTTCCBHHHHHHHTCCEEEECCTTSCCBHHHHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHhcCCceEeeEC-C-hhhCCCccCCCCHHHHHHcCCCEEEEeeeeccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 67888888888999999983 2 233 7788999999997 4433 445566555544 567899999999
Q ss_pred CHHHHHHHHHhCCCEEEEcCC--CCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEE
Q 021575 148 NLGEALRRIREGAAMIRTKGE--AGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVV 225 (310)
Q Consensus 148 t~~ea~~~~~~Gad~V~v~g~--~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi 225 (310)
+.+|..++...++++|..+++ .+||..+ .+.++|++ .....+++.+. .+++++
T Consensus 123 e~~e~~~~~~~~~~iIayep~waiGtG~~v----------------~t~~~d~~-------~~~~~~ir~~~--~~~~il 177 (226)
T 1w0m_A 123 DPRTSLAAAALGPHAVAVEPPELIGTGRAV----------------SRYKPEAI-------VETVGLVSRHF--PEVSVI 177 (226)
T ss_dssp SHHHHHHHHHTCCSEEEECCGGGTTTSCCH----------------HHHCHHHH-------HHHHHHHHHHC--TTSEEE
T ss_pred CHHHHHHHhcCCCCEEEEcChhhhccCCCC----------------CCCChhHH-------HHHHHHHHhcc--CCCEEE
Confidence 999988888889999998874 4455110 11122211 11233444433 246777
Q ss_pred EeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhc
Q 021575 226 HFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTH 274 (310)
Q Consensus 226 ~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~ 274 (310)
.+|||++.+++..+...|+||++||+++++++||....+++..++.+
T Consensus 178 --yggsV~~~n~~~~~~~~giDG~LVG~a~l~a~~~~~~i~~l~~~~~~ 224 (226)
T 1w0m_A 178 --TGAGIESGDDVAAALRLGTRGVLLASAAVKAKDPYAKIVELAKPLSE 224 (226)
T ss_dssp --EESSCCSHHHHHHHHHTTCSEEEECHHHHTCSSHHHHHHHHHHHHHH
T ss_pred --EeCCCCcHHHHHHHHhCCCCEEEECHHHHCCcCHHHHHHHHHHHHHh
Confidence 68999999999999899999999999999999999998888877653
No 77
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=99.27 E-value=1.4e-10 Score=101.23 Aligned_cols=156 Identities=12% Similarity=0.142 Sum_probs=116.0
Q ss_pred HHHHHHHHcCCcEE-EeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEEeCCCC
Q 021575 46 EQARVAEEAGACAV-MALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVL 124 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i-~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi~~~~~ 124 (310)
++++++.++|.+.+ +-++ .. .-.+.|+++++.+.-+++.-..+-..++++.+.++||++++.+.
T Consensus 29 ~~a~al~~gGi~~iEvt~~------t~-------~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivsP~-- 93 (217)
T 3lab_A 29 PMAKALVAGGVHLLEVTLR------TE-------AGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVSPG-- 93 (217)
T ss_dssp HHHHHHHHTTCCEEEEETT------ST-------THHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEESS--
T ss_pred HHHHHHHHcCCCEEEEeCC------Cc-------cHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEeCC--
Confidence 67999999999987 3332 00 11688999988874443332222346889999999999997654
Q ss_pred CchhHHHHHHhcCCCC------cEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhH
Q 021575 125 TPADEENHINKHNFRI------PFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDE 198 (310)
Q Consensus 125 ~~~~~~~~i~~~~~~i------~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~ 198 (310)
...++.+..++ .++ +++.++.|+.|+.++.++|+|+|++++....
T Consensus 94 ~~~evi~~~~~--~~v~~~~~~~~~PG~~TptE~~~A~~~Gad~vK~FPa~~~--------------------------- 144 (217)
T 3lab_A 94 LTPELIEKAKQ--VKLDGQWQGVFLPGVATASEVMIAAQAGITQLKCFPASAI--------------------------- 144 (217)
T ss_dssp CCHHHHHHHHH--HHHHCSCCCEEEEEECSHHHHHHHHHTTCCEEEETTTTTT---------------------------
T ss_pred CcHHHHHHHHH--cCCCccCCCeEeCCCCCHHHHHHHHHcCCCEEEECccccc---------------------------
Confidence 24566666654 356 8999999999999999999999999753211
Q ss_pred HHHhhhccCCcHHHHHHHhhc-CCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 021575 199 VFTFAKKIAAPYDLVMQTKQL-GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 199 ~~~~~~~~~~~~~~i~~i~~~-~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~ 257 (310)
...+.++.++.. .++|++ +.||| +++++.+++++|+..++.||.++.
T Consensus 145 ---------gG~~~lkal~~p~p~i~~~--ptGGI-~~~N~~~~l~aGa~~~vgGs~l~~ 192 (217)
T 3lab_A 145 ---------GGAKLLKAWSGPFPDIQFC--PTGGI-SKDNYKEYLGLPNVICAGGSWLTE 192 (217)
T ss_dssp ---------THHHHHHHHHTTCTTCEEE--EBSSC-CTTTHHHHHHSTTBCCEEESGGGC
T ss_pred ---------cCHHHHHHHHhhhcCceEE--EeCCC-CHHHHHHHHHCCCEEEEEChhhcC
Confidence 113456667654 368898 78999 599999999999999988888884
No 78
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=99.25 E-value=7e-11 Score=104.13 Aligned_cols=162 Identities=21% Similarity=0.268 Sum_probs=117.8
Q ss_pred HHHHHHHHhhcCcceeeccccCcHHH---------HHHHHHcCCCEEE-eCCC--CCchhHHHHHHh-cCCCCcEEEecC
Q 021575 81 PQLIKEIKQSVTIPVMAKARIGHFVE---------AQILEAIGIDYVD-ESEV--LTPADEENHINK-HNFRIPFVCGCR 147 (310)
Q Consensus 81 ~~~i~~i~~~~~iPv~vk~~~~~~~~---------a~~~~~aGad~Vi-~~~~--~~~~~~~~~i~~-~~~~i~~~v~~~ 147 (310)
+..+..+++.+++|+..++. . ..+ +..+.+.|||.|+ ++.- ....++.+.++. ...++.++++++
T Consensus 48 ~~~L~~v~~~~~i~v~aQdv-~-~~~~Ga~TGeis~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVg 125 (225)
T 1hg3_A 48 LVDLRMIAESVEIPVFAQHI-D-PIKPGSHTGHVLPEAVKEAGAVGTLLNHSENRMILADLEAAIRRAEEVGLMTMVCSN 125 (225)
T ss_dssp HHHHHHHHHSCSSCBEESCC-C-SCCSBSCTTCCCHHHHHHTTCCEEEESCGGGCCBHHHHHHHHHHHHHHTCEEEEEES
T ss_pred HHHHHHHHHhcCCceeeeeC-C-cccCCCccCcccHHHHHHcCCCEEEECcchhcCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 78899999888999999973 2 223 7889999999997 4432 445556555544 457899999999
Q ss_pred CHHHHHHHHHhCCCEEEEcCC--CCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEE
Q 021575 148 NLGEALRRIREGAAMIRTKGE--AGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVV 225 (310)
Q Consensus 148 t~~ea~~~~~~Gad~V~v~g~--~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi 225 (310)
+.+|..++...++++|..+++ .+||.. +.+.++|++ .....+++.+. .+++++
T Consensus 126 e~~e~~~~~~~~~~iIayep~waiGtG~~----------------v~t~~~d~~-------~~~~~~ir~~~--~~~~il 180 (225)
T 1hg3_A 126 NPAVSAAVAALNPDYVAVEPPELIGTGIP----------------VSKAKPEVI-------TNTVELVKKVN--PEVKVL 180 (225)
T ss_dssp SHHHHHHHHTTCCSEEEECCTTTTTTSCC----------------TTTSCTHHH-------HHHHHHHHHHC--TTSEEE
T ss_pred CHHHHHHHhcCCCCEEEEeChhhhccCCC----------------CCCCChhHH-------HHHHHHHHhcc--CCCEEE
Confidence 999988888889999999875 344410 012233221 11133444433 246777
Q ss_pred EeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHH
Q 021575 226 HFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRA 271 (310)
Q Consensus 226 ~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~ 271 (310)
.+|||++.+++..+...|+||++||+++++++||....+++..+
T Consensus 181 --yggsV~~~n~~~~~~~~~vDG~LVG~a~l~a~~~~~~i~~l~~~ 224 (225)
T 1hg3_A 181 --CGAGISTGEDVKKAIELGTVGVLLASGVTKAKDPEKAIWDLVSG 224 (225)
T ss_dssp --EESSCCSHHHHHHHHHTTCSEEEESHHHHTCSSHHHHHHHHHHT
T ss_pred --EeCCCCcHHHHHHHHhCCCCEEEeCHHHHCCcCHHHHHHHHHhh
Confidence 68999999999999999999999999999999998887777653
No 79
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.23 E-value=8.5e-12 Score=115.33 Aligned_cols=78 Identities=17% Similarity=0.090 Sum_probs=66.5
Q ss_pred HHHHHHHhhcC-CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhccCChhhhhhhhhhc
Q 021575 210 YDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHYSDPEVLAEVSCGL 288 (310)
Q Consensus 210 ~~~i~~i~~~~-~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~~~~~~~~~~~~~~ 288 (310)
++.++++++.. ++||+ ++|||+|++|+.+++.+|||+|++||+++. .+|+ ..+++.+.++.++...++.++++..
T Consensus 232 ~~~i~~v~~~~~~ipvi--~~GGI~~~~da~~~l~~GAd~V~ig~~~l~-~~p~-~~~~i~~~l~~~~~~~g~~~i~~~~ 307 (314)
T 2e6f_A 232 LANVNAFYRRCPDKLVF--GCGGVYSGEDAFLHILAGASMVQVGTALQE-EGPG-IFTRLEDELLEIMARKGYRTLEEFR 307 (314)
T ss_dssp HHHHHHHHHHCTTSEEE--EESSCCSHHHHHHHHHHTCSSEEECHHHHH-HCTT-HHHHHHHHHHHHHHHHTCCSSTTTT
T ss_pred HHHHHHHHHhcCCCCEE--EECCCCCHHHHHHHHHcCCCEEEEchhhHh-cCcH-HHHHHHHHHHHHHHHcCCCCHHHHh
Confidence 56778887777 89998 789999999999999999999999999995 3664 5566888888898888888998888
Q ss_pred ccc
Q 021575 289 GEA 291 (310)
Q Consensus 289 ~~~ 291 (310)
|..
T Consensus 308 g~~ 310 (314)
T 2e6f_A 308 GRV 310 (314)
T ss_dssp TCC
T ss_pred chH
Confidence 754
No 80
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=99.23 E-value=1e-10 Score=103.35 Aligned_cols=185 Identities=15% Similarity=0.122 Sum_probs=117.7
Q ss_pred HHHHHHHHcCCcEEEecc---CCcccccccCCCCCCCCHHHHHHHHhhc-CcceeeccccCcH-HHHHHHHHcCCCEEE-
Q 021575 46 EQARVAEEAGACAVMALE---RVPADIRSQGGVARMSDPQLIKEIKQSV-TIPVMAKARIGHF-VEAQILEAIGIDYVD- 119 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~---~~~~~~~~~~G~~~~~~~~~i~~i~~~~-~iPv~vk~~~~~~-~~a~~~~~aGad~Vi- 119 (310)
+..+.++++|++++ +++ ....-.-.+| +..++.+|+.+ +.|+.+...+.+- ..++.+.+ ||.+.
T Consensus 22 ~~i~~~~~~g~d~i-HvDvmDg~fvpn~t~G-------~~~v~~lr~~~p~~~~dvhLmv~dp~~~i~~~~~--Ad~itv 91 (227)
T 1tqx_A 22 EETQRMESLGAEWI-HLDVMDMHFVPNLSFG-------PPVINNLKKYTKSIFFDVHLMVEYPEKYVPLLKT--SNQLTF 91 (227)
T ss_dssp HHHHHHHHTTCSEE-EEEEEBSSSSSCBCCC-------HHHHHHHGGGCSSCEEEEEEESSCGGGGGGGCTT--SSEEEE
T ss_pred HHHHHHHHcCCCEE-EEEEEeCCcCcchhcC-------HHHHHHHHHhCCCCcEEEEEEEcCHHHHHHHHHh--CCEEEE
Confidence 67778889999997 443 1100011233 78999999988 8898887655421 11222333 89884
Q ss_pred --eCCCCCchhHHH---HHHhcCCCCcEEEec--CCHHHHHH-HHHhC-CCEEEEcC--CCCCcchHHHHHHHHhhccce
Q 021575 120 --ESEVLTPADEEN---HINKHNFRIPFVCGC--RNLGEALR-RIREG-AAMIRTKG--EAGTGNIIEAVRHVRSVMGDI 188 (310)
Q Consensus 120 --~~~~~~~~~~~~---~i~~~~~~i~~~v~~--~t~~ea~~-~~~~G-ad~V~v~g--~~~~~~~~~~~~~~r~~~~~~ 188 (310)
.+....+....+ .+++ .++.++++. +|..+..+ ..+.| +|+|.+.+ +++++-
T Consensus 92 H~ea~~~~~~~~i~~~~~i~~--~G~k~gvalnp~tp~~~~~~~l~~g~~D~VlvmsV~pGf~gq--------------- 154 (227)
T 1tqx_A 92 HFEALNEDTERCIQLAKEIRD--NNLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQ--------------- 154 (227)
T ss_dssp EGGGGTTCHHHHHHHHHHHHT--TTCEEEEEECTTSCGGGGHHHHTTTCCSEEEEESSCTTCSSC---------------
T ss_pred eecCCccCHHHHHHHHHHHHH--cCCeEEEEeCCCCcHHHHHHHhhcCCcCEEEEeeeccCCCCc---------------
Confidence 222213555556 5544 555666654 45544444 44554 99985443 122221
Q ss_pred EeecccChhHHHHhhhccCCcHHHHHHHhhcC-CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHH
Q 021575 189 RVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQA 267 (310)
Q Consensus 189 ~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~-~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~ 267 (310)
+-....++.++++++.. ++++. +.||| +++++.++.++|||.+++||+|++++||...+++
T Consensus 155 ---------------~f~~~~l~ki~~lr~~~~~~~I~--VdGGI-~~~ti~~~~~aGAd~~V~GsaIf~~~d~~~~i~~ 216 (227)
T 1tqx_A 155 ---------------SFMHDMMGKVSFLRKKYKNLNIQ--VDGGL-NIETTEISASHGANIIVAGTSIFNAEDPKYVIDT 216 (227)
T ss_dssp ---------------CCCGGGHHHHHHHHHHCTTCEEE--EESSC-CHHHHHHHHHHTCCEEEESHHHHTCSSHHHHHHH
T ss_pred ---------------ccchHHHHHHHHHHHhccCCeEE--EECCC-CHHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHH
Confidence 00122355566666543 67777 46999 6999999999999999999999999999999999
Q ss_pred HHHHHhcc
Q 021575 268 IVRAVTHY 275 (310)
Q Consensus 268 l~~~i~~~ 275 (310)
|++.++.+
T Consensus 217 l~~~~~~~ 224 (227)
T 1tqx_A 217 MRVSVQKY 224 (227)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHH
Confidence 98877644
No 81
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.23 E-value=1.1e-10 Score=110.36 Aligned_cols=78 Identities=18% Similarity=0.256 Sum_probs=66.9
Q ss_pred HHHHHHHhhcC--CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhccCChhhhhhhhhh
Q 021575 210 YDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHYSDPEVLAEVSCG 287 (310)
Q Consensus 210 ~~~i~~i~~~~--~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~~~~~~~~~~~~~ 287 (310)
++.++++++.. ++||+ +.|||.|++|+.+++.+|||+|++||+++. .+|+ ..+++.+.+..++...++.++++.
T Consensus 285 ~~~v~~i~~~v~~~ipvI--~~GGI~s~~da~~~l~~GAd~V~vgra~l~-~gP~-~~~~i~~~l~~~m~~~G~~~i~e~ 360 (367)
T 3zwt_A 285 TQTIREMYALTQGRVPII--GVGGVSSGQDALEKIRAGASLVQLYTALTF-WGPP-VVGKVKRELEALLKEQGFGGVTDA 360 (367)
T ss_dssp HHHHHHHHHHTTTCSCEE--EESSCCSHHHHHHHHHHTCSEEEESHHHHH-HCTH-HHHHHHHHHHHHHHHTTCSSHHHH
T ss_pred HHHHHHHHHHcCCCceEE--EECCCCCHHHHHHHHHcCCCEEEECHHHHh-cCcH-HHHHHHHHHHHHHHHcCCCCHHHh
Confidence 56788888776 89998 789999999999999999999999999953 2675 556688899999988899999999
Q ss_pred cccc
Q 021575 288 LGEA 291 (310)
Q Consensus 288 ~~~~ 291 (310)
.|.+
T Consensus 361 ~G~~ 364 (367)
T 3zwt_A 361 IGAD 364 (367)
T ss_dssp TTGG
T ss_pred hCcc
Confidence 8865
No 82
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.23 E-value=2.5e-11 Score=113.66 Aligned_cols=77 Identities=17% Similarity=0.128 Sum_probs=67.0
Q ss_pred HHHHHHHhhcC--CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccc-cccCCCHHHHHHHHHHHHhccCChhhhhhhhh
Q 021575 210 YDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSG-VFKSGDPVKRAQAIVRAVTHYSDPEVLAEVSC 286 (310)
Q Consensus 210 ~~~i~~i~~~~--~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsa-i~~a~dp~~~a~~l~~~i~~~~~~~~~~~~~~ 286 (310)
++.++++++.. ++||+ +.|||.|++|+.+++.+|||+|++||+ ++. +|+ ..+++.+.++.+++..++.++++
T Consensus 262 ~~~v~~i~~~~~~~ipII--g~GGI~s~~da~~~l~aGAd~V~igra~~~~--gP~-~~~~i~~~L~~~l~~~G~~si~e 336 (345)
T 3oix_A 262 LANVHAFYKRLNPSIQII--GTGGVXTGRDAFEHILCGASMVQIGTALHQE--GPQ-IFKRITKELXAIMTEKGYETLED 336 (345)
T ss_dssp HHHHHHHHTTSCTTSEEE--EESSCCSHHHHHHHHHHTCSEEEESHHHHHH--CTH-HHHHHHHHHHHHHHHHTCCSGGG
T ss_pred HHHHHHHHHHcCCCCcEE--EECCCCChHHHHHHHHhCCCEEEEChHHHhc--ChH-HHHHHHHHHHHHHHHcCCCCHHH
Confidence 57788888876 79998 789999999999999999999999999 565 775 55669999999999899999999
Q ss_pred hcccc
Q 021575 287 GLGEA 291 (310)
Q Consensus 287 ~~~~~ 291 (310)
..|..
T Consensus 337 ~~G~~ 341 (345)
T 3oix_A 337 FRGKL 341 (345)
T ss_dssp TTTCC
T ss_pred HHhHH
Confidence 98863
No 83
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.22 E-value=1.8e-11 Score=114.98 Aligned_cols=78 Identities=15% Similarity=0.118 Sum_probs=66.8
Q ss_pred HHHHHHHhhcC-CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhccCChhhhhhhhhhc
Q 021575 210 YDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHYSDPEVLAEVSCGL 288 (310)
Q Consensus 210 ~~~i~~i~~~~-~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~~~~~~~~~~~~~~ 288 (310)
++.+.++++.. ++||+ +.|||.|++|+.+++.+|||+|++||+++.. .|+ ..+++.+.++.++...++.++++..
T Consensus 265 ~~~i~~v~~~~~~ipII--~~GGI~s~~da~~~l~aGAd~V~vgra~l~~-GP~-~~~~i~~~l~~~m~~~G~~si~el~ 340 (354)
T 4ef8_A 265 LANINAFYRRCPGKLIF--GCGGVYTGEDAFLHVLAGASMVQVGTALQEE-GPS-IFERLTSELLGVMAKKRYQTLDEFR 340 (354)
T ss_dssp HHHHHHHHHHCTTSEEE--EESCCCSHHHHHHHHHHTEEEEEECHHHHHH-CTT-HHHHHHHHHHHHHHHHTCCSGGGTT
T ss_pred HHHHHHHHHhCCCCCEE--EECCcCCHHHHHHHHHcCCCEEEEhHHHHHh-CHH-HHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 67788887764 79998 7899999999999999999999999999972 164 5567899999999989999999998
Q ss_pred ccc
Q 021575 289 GEA 291 (310)
Q Consensus 289 ~~~ 291 (310)
|..
T Consensus 341 G~~ 343 (354)
T 4ef8_A 341 GKV 343 (354)
T ss_dssp TCC
T ss_pred HHH
Confidence 863
No 84
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=99.22 E-value=6.4e-11 Score=111.30 Aligned_cols=152 Identities=20% Similarity=0.261 Sum_probs=100.1
Q ss_pred HHHHHHHHcCCcEEEecc---CCcccccccCCCCCCCCHHHHH----HHHhhcCcceeeccccCcHHHHHHHHHcCCCEE
Q 021575 46 EQARVAEEAGACAVMALE---RVPADIRSQGGVARMSDPQLIK----EIKQSVTIPVMAKARIGHFVEAQILEAIGIDYV 118 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~---~~~~~~~~~~G~~~~~~~~~i~----~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~V 118 (310)
+.|+.+.++|+|+| +|| |.++..+...|++++..++.+. .+++.+++||.+|.++++.+.
T Consensus 74 ~aA~~a~~~G~D~I-eIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~------------ 140 (350)
T 3b0p_A 74 EAARIGEAFGYDEI-NLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGK------------ 140 (350)
T ss_dssp HHHHHHHHTTCSEE-EEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTC------------
T ss_pred HHHHHHHHcCCCEE-EECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCcc------------
Confidence 46777788999987 787 4433333334555666665544 456667999999988764210
Q ss_pred EeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhH
Q 021575 119 DESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDE 198 (310)
Q Consensus 119 i~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~ 198 (310)
.+..+ ..+.+.++.+.|+|+|.++++....... .+..
T Consensus 141 -----~~~~~-------------------~~~~a~~l~~aG~d~I~V~~r~~~~g~~-------------------g~~~ 177 (350)
T 3b0p_A 141 -----ETYRG-------------------LAQSVEAMAEAGVKVFVVHARSALLALS-------------------TKAN 177 (350)
T ss_dssp -----CCHHH-------------------HHHHHHHHHHTTCCEEEEECSCBC---------------------------
T ss_pred -----ccHHH-------------------HHHHHHHHHHcCCCEEEEecCchhcccC-------------------cccc
Confidence 00001 1133566778899999998764210000 0000
Q ss_pred HHHhhhccCCcHHHHHHHhhcC-CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHH
Q 021575 199 VFTFAKKIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 199 ~~~~~~~~~~~~~~i~~i~~~~-~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~ 262 (310)
.......+++++++++.. ++||+ ++|||.|++|+.++++ |||+|++||+++. ||+
T Consensus 178 ----~~~~~~~~~~i~~ik~~~~~iPVi--anGgI~s~eda~~~l~-GaD~V~iGRa~l~--~P~ 233 (350)
T 3b0p_A 178 ----REIPPLRHDWVHRLKGDFPQLTFV--TNGGIRSLEEALFHLK-RVDGVMLGRAVYE--DPF 233 (350)
T ss_dssp ------CCCCCHHHHHHHHHHCTTSEEE--EESSCCSHHHHHHHHT-TSSEEEECHHHHH--CGG
T ss_pred ----cCCCcccHHHHHHHHHhCCCCeEE--EECCcCCHHHHHHHHh-CCCEEEECHHHHh--CcH
Confidence 000123578888898877 89998 7899999999999998 9999999999997 665
No 85
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=99.22 E-value=3.2e-11 Score=107.28 Aligned_cols=181 Identities=15% Similarity=0.079 Sum_probs=113.6
Q ss_pred HHHHHHHHcCCcEEEecc---CCcccccccCCCCCCCCHHHHHHHHhhc--CcceeeccccCcHHHHHHHHHcCCCEEEe
Q 021575 46 EQARVAEEAGACAVMALE---RVPADIRSQGGVARMSDPQLIKEIKQSV--TIPVMAKARIGHFVEAQILEAIGIDYVDE 120 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~---~~~~~~~~~~G~~~~~~~~~i~~i~~~~--~iPv~vk~~~~~~~~a~~~~~aGad~Vi~ 120 (310)
+.++.+.++|++++ +++ ......-.++ +..++.+++.+ ++.+++.+ ....++.+.++|||.+..
T Consensus 30 ~~i~~~~~~gad~l-hvDvmDG~fvpn~t~G-------~~~v~~lr~~~~~DvhLMv~~---p~~~i~~~~~aGAd~itv 98 (237)
T 3cu2_A 30 EEVTTLLENQINVL-HFDIADGQFSSLFTVG-------AIGIKYFPTHCFKDVHLMVRN---QLEVAKAVVANGANLVTL 98 (237)
T ss_dssp HHHHHHHHTTCCEE-EEEEEBSSSSSCBCBC-------THHHHTSCTTSEEEEEEECSC---HHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHcCCCEE-EEEEecCccccchhhh-------HHHHHHHhhhCCCCeEEEEEC---HHHHHHHHHHcCCCEEEE
Confidence 66888899999997 443 1100011122 57888888776 44444332 245678999999999852
Q ss_pred CC--CCCchhHHHHHHhcCC-------CCcEEEec--CCHHHHHHHHHhCCCEEEE---cCCCCCcchHHHHHHHHhhcc
Q 021575 121 SE--VLTPADEENHINKHNF-------RIPFVCGC--RNLGEALRRIREGAAMIRT---KGEAGTGNIIEAVRHVRSVMG 186 (310)
Q Consensus 121 ~~--~~~~~~~~~~i~~~~~-------~i~~~v~~--~t~~ea~~~~~~Gad~V~v---~g~~~~~~~~~~~~~~r~~~~ 186 (310)
+. ...+....+.+++.+. +..+++++ +|+.+.......++|+|.+ ++..++...
T Consensus 99 H~ea~~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~~~l~~~D~vlvMsv~pgfggq~f------------ 166 (237)
T 3cu2_A 99 QLEQYHDFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPYLDQIDVIQLLTLDPRNGTKYP------------ 166 (237)
T ss_dssp ETTCTTSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTTTTTTCSEEEEESEETTTTEECC------------
T ss_pred ecCCcccHHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHHHHhhcCceeeeeeeccCcCCeec------------
Confidence 22 1234455555543311 55666665 5766666555568999865 432211110
Q ss_pred ceEeecccChhHHHHhhhccCCcHHHHHHHhhcC-----CCCEEEeCCCCCCCHHHHHHHHH--cCCCEEEEccccccCC
Q 021575 187 DIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG-----RLPVVHFAAGGVATPADAAMMMQ--LGCDGVFVGSGVFKSG 259 (310)
Q Consensus 187 ~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~-----~iPVi~iA~GGI~t~~d~~~~l~--~GadgV~VGsai~~a~ 259 (310)
.....+.++++++.. ++|+. +.||| +.+++.++.+ +|||++++||+|+++
T Consensus 167 -------------------~~~~l~ki~~lr~~~~~~~~~~~I~--vdGGI-~~~~~~~~~~~~aGad~~VvGSaIf~~- 223 (237)
T 3cu2_A 167 -------------------SELILDRVIQVEKRLGNRRVEKLIN--IDGSM-TLELAKYFKQGTHQIDWLVSGSALFSG- 223 (237)
T ss_dssp -------------------HHHHHHHHHHHHHHHGGGGGGCEEE--EESSC-CHHHHHHHHHSSSCCCCEEECGGGGSS-
T ss_pred -------------------ChhHHHHHHHHHHHHHhcCCCceEE--EECCc-CHHHHHHHHHhCCCCcEEEEeeHHhCC-
Confidence 011133344444332 57887 46999 6999999999 999999999999998
Q ss_pred CHHHHHHHHHHHH
Q 021575 260 DPVKRAQAIVRAV 272 (310)
Q Consensus 260 dp~~~a~~l~~~i 272 (310)
||...+++|++.+
T Consensus 224 d~~~~~~~l~~~~ 236 (237)
T 3cu2_A 224 ELKTNLKVWKSSI 236 (237)
T ss_dssp CHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhh
Confidence 9998888886643
No 86
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.21 E-value=1.9e-11 Score=112.51 Aligned_cols=79 Identities=25% Similarity=0.377 Sum_probs=66.6
Q ss_pred HHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhccCChhhhhhhhhhcc
Q 021575 210 YDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLG 289 (310)
Q Consensus 210 ~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~~~~~~~~~~~~~~~ 289 (310)
+++++++++..++||+ ++|||++++|+.+++++|||+|++||+++. +|. ..+++.+.++.++...++.++++..|
T Consensus 230 ~~~i~~i~~~~~ipvi--a~GGI~~~~d~~~~l~~GAd~V~vg~~~l~--~p~-~~~~i~~~l~~~~~~~g~~~~~~~~g 304 (311)
T 1ep3_A 230 LKLIHQVAQDVDIPII--GMGGVANAQDVLEMYMAGASAVAVGTANFA--DPF-VCPKIIDKLPELMDQYRIESLESLIQ 304 (311)
T ss_dssp HHHHHHHHTTCSSCEE--ECSSCCSHHHHHHHHHHTCSEEEECTHHHH--CTT-HHHHHHHHHHHHHHHTTCSCHHHHHH
T ss_pred HHHHHHHHHhcCCCEE--EECCcCCHHHHHHHHHcCCCEEEECHHHHc--CcH-HHHHHHHHHHHHHHHcCCCCHHHHhC
Confidence 4678888887899998 789999999999999999999999999998 554 44568888888888788888888887
Q ss_pred cchh
Q 021575 290 EAMV 293 (310)
Q Consensus 290 ~~~~ 293 (310)
.+.+
T Consensus 305 ~~~~ 308 (311)
T 1ep3_A 305 EVKE 308 (311)
T ss_dssp HHHH
T ss_pred hhcc
Confidence 6544
No 87
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=99.20 E-value=1.8e-11 Score=107.45 Aligned_cols=159 Identities=13% Similarity=0.176 Sum_probs=105.7
Q ss_pred HHHHHHHHhh-cCcceeecccc--CcHHHHHHHHHcCCCEEEeCCCCC---chhHHHHHHhcCCCCcE-EEecCCHHHHH
Q 021575 81 PQLIKEIKQS-VTIPVMAKARI--GHFVEAQILEAIGIDYVDESEVLT---PADEENHINKHNFRIPF-VCGCRNLGEAL 153 (310)
Q Consensus 81 ~~~i~~i~~~-~~iPv~vk~~~--~~~~~a~~~~~aGad~Vi~~~~~~---~~~~~~~i~~~~~~i~~-~v~~~t~~ea~ 153 (310)
++.++++|+. .+.|+.+...+ .....++.+.++|+|+++.+.... ..++.+.+++++....+ +..+.|.+++.
T Consensus 47 ~~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~d~l~~~T~~~~~ 126 (218)
T 3jr2_A 47 MKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYGNWTMQDAK 126 (218)
T ss_dssp THHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECCSSCCHHHHH
T ss_pred HHHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccceeeeecCCHHHHH
Confidence 6789999887 46677653222 223467889999999996544322 23445555554332222 34456788888
Q ss_pred HHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCc---HHHHHHHhhcCCCCEEEeCCC
Q 021575 154 RRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAP---YDLVMQTKQLGRLPVVHFAAG 230 (310)
Q Consensus 154 ~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~---~~~i~~i~~~~~iPVi~iA~G 230 (310)
.+.+.|+|++.++- +.++. + .+.... ++.+++++. .++|++ +.|
T Consensus 127 ~~~~~g~d~v~~~~-~~~~~----------------------------~-~g~~~~~~~l~~i~~~~~-~~~pi~--v~G 173 (218)
T 3jr2_A 127 AWVDLGITQAIYHR-SRDAE----------------------------L-AGIGWTTDDLDKMRQLSA-LGIELS--ITG 173 (218)
T ss_dssp HHHHTTCCEEEEEC-CHHHH----------------------------H-HTCCSCHHHHHHHHHHHH-TTCEEE--EES
T ss_pred HHHHcCccceeeee-ccccc----------------------------c-CCCcCCHHHHHHHHHHhC-CCCCEE--EEC
Confidence 88888999987642 11000 0 011111 233444433 478998 569
Q ss_pred CCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhc
Q 021575 231 GVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTH 274 (310)
Q Consensus 231 GI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~ 274 (310)
|| +++++.+++++|||+++|||+|++++||...+ +|++.+++
T Consensus 174 GI-~~~~~~~~~~aGAd~vvvGsaI~~a~dp~~a~-~l~~~~~~ 215 (218)
T 3jr2_A 174 GI-VPEDIYLFEGIKTKTFIAGRALAGAEGQQTAA-ALREQIDR 215 (218)
T ss_dssp SC-CGGGGGGGTTSCEEEEEESGGGSHHHHHHHHH-HHHHHHHH
T ss_pred CC-CHHHHHHHHHcCCCEEEEchhhcCCCCHHHHH-HHHHHHHh
Confidence 99 69999999999999999999999999999888 88887764
No 88
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=99.20 E-value=1.4e-09 Score=97.81 Aligned_cols=208 Identities=17% Similarity=0.206 Sum_probs=130.7
Q ss_pred CHHHHHHHHHcCCcEEEeccCCcccccccC-CCC--CC---CCHHHHHHH----Hhhc-Ccceeecccc----C-cHHHH
Q 021575 44 TPEQARVAEEAGACAVMALERVPADIRSQG-GVA--RM---SDPQLIKEI----KQSV-TIPVMAKARI----G-HFVEA 107 (310)
Q Consensus 44 ~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~-G~~--~~---~~~~~i~~i----~~~~-~iPv~vk~~~----~-~~~~a 107 (310)
+-=.|+..+++|+|.|+.+|.-. .|..| ||- ++ ...+.+.++ --.+ ++||++..-- . .....
T Consensus 37 tGlsAk~~e~gGaDlii~ynsGr--fR~~G~~slag~lpygnaN~iv~e~~~evlp~v~~iPV~Agv~~~DP~~~~g~~L 114 (286)
T 2p10_A 37 TGLSAKSEEAGDIDLIVIYNSGR--YRMAGRGSLAGLLAYGNANQIVVDMAREVLPVVRHTPVLAGVNGTDPFMVMSTFL 114 (286)
T ss_dssp SHHHHHHHHHTTCSEEEECHHHH--HHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCSSSCEEEEECTTCTTCCHHHHH
T ss_pred cchhhHHHHhCCCCEEEEeccch--hhhcCccchhhhccccCHHHHHHHHHHhhhccCCCCCEEEEECCcCCCcCHHHHH
Confidence 44578889999999988887110 01111 110 11 112333333 2223 8999987211 1 23445
Q ss_pred HHHHHcCCCEEEeCC----------------CCCchhHHHHHHh-cCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCC-C
Q 021575 108 QILEAIGIDYVDESE----------------VLTPADEENHINK-HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGE-A 169 (310)
Q Consensus 108 ~~~~~aGad~Vi~~~----------------~~~~~~~~~~i~~-~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~-~ 169 (310)
+.+.++|+.+|+... .+...+..+++++ +..++..++.+.|.+++....++|+|+|.+|.. +
T Consensus 115 e~lk~~Gf~Gv~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti~~v~~~eeA~amA~agpDiI~~h~glT 194 (286)
T 2p10_A 115 RELKEIGFAGVQNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTPYVFSPEDAVAMAKAGADILVCHMGLT 194 (286)
T ss_dssp HHHHHHTCCEEEECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEECCEECSHHHHHHHHHHTCSEEEEECSCC
T ss_pred HHHHHhCCceEEECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHcCCCEEEECCCCC
Confidence 889999999996322 2455666777766 668899999999999999999999999999964 2
Q ss_pred CCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc-CCCCEEEeCCCCCCCHHHHHHHHHc--CC
Q 021575 170 GTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL-GRLPVVHFAAGGVATPADAAMMMQL--GC 246 (310)
Q Consensus 170 ~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~-~~iPVi~iA~GGI~t~~d~~~~l~~--Ga 246 (310)
..+.+-. . ...+.++- .....++.+.+++. .++.|++ .+|||.+++|+..+++. |+
T Consensus 195 ~gglIG~-~-------------~avs~~~~------~e~i~~i~~a~~~vnpdvivLc-~gGpIstpeDv~~~l~~t~G~ 253 (286)
T 2p10_A 195 TGGAIGA-R-------------SGKSMDDC------VSLINECIEAARTIRDDIIILS-HGGPIANPEDARFILDSCQGC 253 (286)
T ss_dssp -----------------------CCCHHHH------HHHHHHHHHHHHHHCSCCEEEE-ESTTCCSHHHHHHHHHHCTTC
T ss_pred CCCcccC-C-------------CcccHHHh------HHHHHHHHHHHHHhCCCcEEEe-cCCCCCCHHHHHHHHhcCCCc
Confidence 1111100 0 00011100 00012223333332 3566664 46699999999999998 99
Q ss_pred CEEEEccccccCCCHHHHHHHHHHHHhcc
Q 021575 247 DGVFVGSGVFKSGDPVKRAQAIVRAVTHY 275 (310)
Q Consensus 247 dgV~VGsai~~a~dp~~~a~~l~~~i~~~ 275 (310)
+|+..+|++.+.+ |....+++.+.++..
T Consensus 254 ~G~~gASsier~p-~e~ai~~~~~~fk~~ 281 (286)
T 2p10_A 254 HGFYGASSMERLP-AEEAIRSQTLAFKAI 281 (286)
T ss_dssp CEEEESHHHHHHH-HHHHHHHHHHHHHTC
T ss_pred cEEEeehhhhcCC-HHHHHHHHHHHHHhc
Confidence 9999999999987 888878888887754
No 89
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=99.18 E-value=7.1e-11 Score=104.66 Aligned_cols=170 Identities=18% Similarity=0.217 Sum_probs=107.4
Q ss_pred cccccCCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeecccc-CcHHHHHHHHHcCC
Q 021575 37 GVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARI-GHFVEAQILEAIGI 115 (310)
Q Consensus 37 g~i~~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~-~~~~~a~~~~~aGa 115 (310)
|+-..-.+.+.++.++++|+|.| .+. -..|.+....++.++++|+ +++|+++.... +.. ++|+
T Consensus 15 gDP~~~~t~~~~~~l~~~GaD~I-elG-------~S~g~t~~~~~~~v~~ir~-~~~Pivl~~y~~n~i-------~~gv 78 (234)
T 2f6u_A 15 LDPDRTNTDEIIKAVADSGTDAV-MIS-------GTQNVTYEKARTLIEKVSQ-YGLPIVVEPSDPSNV-------VYDV 78 (234)
T ss_dssp ECTTSCCCHHHHHHHHTTTCSEE-EEC-------CCTTCCHHHHHHHHHHHTT-SCCCEEECCSSCCCC-------CCCS
T ss_pred eCCCccccHHHHHHHHHcCCCEE-EEC-------CCCCCCHHHHHHHHHHhcC-CCCCEEEecCCcchh-------hcCC
Confidence 44334456688999999999987 541 1233433334678888888 89999986655 322 7899
Q ss_pred CEEEeCCCC--CchhHH-----HHH-------HhcC-----CCCcE----EEecC-------------CHHHHHHHHHhC
Q 021575 116 DYVDESEVL--TPADEE-----NHI-------NKHN-----FRIPF----VCGCR-------------NLGEALRRIREG 159 (310)
Q Consensus 116 d~Vi~~~~~--~~~~~~-----~~i-------~~~~-----~~i~~----~v~~~-------------t~~ea~~~~~~G 159 (310)
|+++.++.. +..++. +.+ ++++ ..++. ++... +.+.+.+..+.|
T Consensus 79 Dg~iipdLp~ee~~~~~~g~~~~~~~~~~~~~~~~g~~~~~l~~I~~gYil~~P~~~~~rl~~g~~~~~~e~~~~~a~~g 158 (234)
T 2f6u_A 79 DYLFVPTVLNSADGDWITGKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVLNPDSAVARVTKALCNIDKELAASYALVG 158 (234)
T ss_dssp SEEEEEEETTBSBGGGTTHHHHHHHHTTGGGHHHHHHHHHSTTEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHH
T ss_pred CEEEEcccCCCCCHHHHhhhHHHHHHhhhhhHHHcCCcccceeeeecceEEECCCCceEEeecCCCCCCHHHHHHHHHhh
Confidence 999866532 223333 333 3333 33222 22221 222233333333
Q ss_pred C-----CEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcC-CCCEEEeCCCCCC
Q 021575 160 A-----AMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG-RLPVVHFAAGGVA 233 (310)
Q Consensus 160 a-----d~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~-~iPVi~iA~GGI~ 233 (310)
. .+|.+.+ . +.....++++++++.. ++|++ .+|||+
T Consensus 159 ~~~l~~~~Vyl~~-~-----------------------------------G~~~~~~~i~~i~~~~~~~Pv~--vGgGI~ 200 (234)
T 2f6u_A 159 EKLFNLPIIYIEY-S-----------------------------------GTYGNPELVAEVKKVLDKARLF--YGGGID 200 (234)
T ss_dssp HHTTCCSEEEEEC-T-----------------------------------TSCCCHHHHHHHHHHCSSSEEE--EESCCC
T ss_pred hhhcCCCEEEEeC-C-----------------------------------CCcchHHHHHHHHHhCCCCCEE--EEecCC
Confidence 3 3333322 1 1234577889998888 89998 689999
Q ss_pred CHHHHHHHHHcCCCEEEEccccccCCCHHH
Q 021575 234 TPADAAMMMQLGCDGVFVGSGVFKSGDPVK 263 (310)
Q Consensus 234 t~~d~~~~l~~GadgV~VGsai~~a~dp~~ 263 (310)
+++++.++++ |||+|+|||++++ +|..
T Consensus 201 s~e~a~~~~~-gAd~VIVGSa~v~--~~~~ 227 (234)
T 2f6u_A 201 SREKAREMLR-YADTIIVGNVIYE--KGID 227 (234)
T ss_dssp SHHHHHHHHH-HSSEEEECHHHHH--HCHH
T ss_pred CHHHHHHHHh-CCCEEEEChHHHh--CHHH
Confidence 9999999989 9999999999997 5543
No 90
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.18 E-value=8.2e-10 Score=105.60 Aligned_cols=129 Identities=16% Similarity=0.194 Sum_probs=86.6
Q ss_pred HHHHHHHHHcCCCEEEe-CCCCCch---hHHHHHHhcCCCCcEEE-ecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHH
Q 021575 104 FVEAQILEAIGIDYVDE-SEVLTPA---DEENHINKHNFRIPFVC-GCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAV 178 (310)
Q Consensus 104 ~~~a~~~~~aGad~Vi~-~~~~~~~---~~~~~i~~~~~~i~~~v-~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~ 178 (310)
.+.++.+.++|+|.|.. ...-.+. ++.+.+++...++++++ .+.+.++++++.+.|+|+|.+.+..++ +...
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad~I~vg~~~G~--~~~~- 231 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGS--ICTT- 231 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEECSSCST--TSHH-
T ss_pred HHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCCEEEECCCCCc--CcCc-
Confidence 46677888999999953 2112233 33344444323677775 689999999999999999998322221 1100
Q ss_pred HHHHhhccceEeecccChhHHHHhhhcc-CCcHHHHHHHhh---cCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccc
Q 021575 179 RHVRSVMGDIRVLRNMDDDEVFTFAKKI-AAPYDLVMQTKQ---LGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSG 254 (310)
Q Consensus 179 ~~~r~~~~~~~~l~~~~~d~~~~~~~~~-~~~~~~i~~i~~---~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsa 254 (310)
+. . .+. .+.++.+..+.+ ..++||+ ++|||++++|+.+++.+|||+|++|++
T Consensus 232 ---~~-------~------------~~~g~p~~~~l~~v~~~~~~~~ipVi--a~GGI~~~~d~~~ala~GAd~V~iG~~ 287 (404)
T 1eep_A 232 ---RI-------V------------AGVGVPQITAICDVYEACNNTNICII--ADGGIRFSGDVVKAIAAGADSVMIGNL 287 (404)
T ss_dssp ---HH-------H------------HCCCCCHHHHHHHHHHHHTTSSCEEE--EESCCCSHHHHHHHHHHTCSEEEECHH
T ss_pred ---cc-------c------------CCCCcchHHHHHHHHHHHhhcCceEE--EECCCCCHHHHHHHHHcCCCHHhhCHH
Confidence 00 0 011 223444555543 4589998 789999999999999999999999999
Q ss_pred cccCC
Q 021575 255 VFKSG 259 (310)
Q Consensus 255 i~~a~ 259 (310)
++.++
T Consensus 288 ~l~~~ 292 (404)
T 1eep_A 288 FAGTK 292 (404)
T ss_dssp HHTBT
T ss_pred HhcCC
Confidence 97653
No 91
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=99.18 E-value=7.7e-11 Score=109.28 Aligned_cols=140 Identities=23% Similarity=0.312 Sum_probs=95.2
Q ss_pred HHHHHHHHcCCcEEEecc---CCcccccccCCCCCCCCHHH----HHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEE
Q 021575 46 EQARVAEEAGACAVMALE---RVPADIRSQGGVARMSDPQL----IKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYV 118 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~---~~~~~~~~~~G~~~~~~~~~----i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~V 118 (310)
+.|+.+.++ +|+| +|| |.++..+...|++++..++. ++.+++.+++||.+|.+.++..
T Consensus 75 ~aa~~a~~~-~d~I-ein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~------------- 139 (318)
T 1vhn_A 75 EAARILSEK-YKWI-DLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEK------------- 139 (318)
T ss_dssp HHHHHHTTT-CSEE-EEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSS-------------
T ss_pred HHHHHHHHh-CCEE-EEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCCh-------------
Confidence 357777778 9987 777 44433333345556666654 4455677889999998875310
Q ss_pred EeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhH
Q 021575 119 DESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDE 198 (310)
Q Consensus 119 i~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~ 198 (310)
. .+.+.+.++.+.|+|+|.++++...+.
T Consensus 140 --------~-------------------~~~~~a~~l~~~G~d~i~v~g~~~~~~------------------------- 167 (318)
T 1vhn_A 140 --------N-------------------EVEEIYRILVEEGVDEVFIHTRTVVQS------------------------- 167 (318)
T ss_dssp --------C-------------------CHHHHHHHHHHTTCCEEEEESSCTTTT-------------------------
T ss_pred --------H-------------------HHHHHHHHHHHhCCCEEEEcCCCcccc-------------------------
Confidence 0 011346667788999998887542110
Q ss_pred HHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHH-cCCCEEEEccccccCCCHHH
Q 021575 199 VFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVGSGVFKSGDPVK 263 (310)
Q Consensus 199 ~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~-~GadgV~VGsai~~a~dp~~ 263 (310)
....+.++.++++++ ++||+ ++|||.|++|+.++++ .|||+|++|++++. ||+.
T Consensus 168 -----~~~~~~~~~i~~i~~--~ipVi--~~GgI~s~~da~~~l~~~gad~V~iGR~~l~--~P~l 222 (318)
T 1vhn_A 168 -----FTGRAEWKALSVLEK--RIPTF--VSGDIFTPEDAKRALEESGCDGLLVARGAIG--RPWI 222 (318)
T ss_dssp -----TSSCCCGGGGGGSCC--SSCEE--EESSCCSHHHHHHHHHHHCCSEEEESGGGTT--CTTH
T ss_pred -----CCCCcCHHHHHHHHc--CCeEE--EECCcCCHHHHHHHHHcCCCCEEEECHHHHh--Ccch
Confidence 011234566666666 89998 7899999999999997 79999999999997 6653
No 92
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.16 E-value=2.4e-10 Score=108.19 Aligned_cols=163 Identities=24% Similarity=0.323 Sum_probs=98.8
Q ss_pred HHHHHHHHcCCcEE-EeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeec--cccCc-HHHHHHHHHcCCCEE--E
Q 021575 46 EQARVAEEAGACAV-MALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAK--ARIGH-FVEAQILEAIGIDYV--D 119 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i-~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk--~~~~~-~~~a~~~~~aGad~V--i 119 (310)
+.+++++++|++++ +.++ +|. .+ ...+.++..+.+|+.+. ..... ... .....|++.. +
T Consensus 140 ~~~~~a~~~G~~ai~it~d-~p~----~g--------~r~~d~r~~~~~p~~~~~~~~~~~~~~~--~~~~~g~~~~~~v 204 (370)
T 1gox_A 140 QLVRRAERAGFKAIALTVD-TPR----LG--------RREADIKNRFVLPPFLTLKNFEGIDLGK--MDKANDSGLSSYV 204 (370)
T ss_dssp HHHHHHHHTTCCEEEEECS-CSS----CC--------CCHHHHHTTCCCCTTCCCGGGSSSCCC-----------HHHHH
T ss_pred HHHHHHHHCCCCEEEEeCC-CCc----cc--------ccHHHHHhccCCCcccchhhhhhhhhhc--cccccCccHHHHH
Confidence 57888899999987 2332 111 11 12344466666665441 11110 000 0112344431 1
Q ss_pred e---CCCCCchhHHHHHHhcCCCCcEEE-ecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccC
Q 021575 120 E---SEVLTPADEENHINKHNFRIPFVC-GCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMD 195 (310)
Q Consensus 120 ~---~~~~~~~~~~~~i~~~~~~i~~~v-~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~ 195 (310)
. ...+.... .+.+++. .++++++ .+.+.+++.++.++|+|+|.++++++.. + +
T Consensus 205 ~~~~~~~~~~~~-i~~l~~~-~~~pv~vK~~~~~e~a~~a~~~Gad~I~vs~~ggr~------------------~---~ 261 (370)
T 1gox_A 205 AGQIDRSLSWKD-VAWLQTI-TSLPILVKGVITAEDARLAVQHGAAGIIVSNHGARQ------------------L---D 261 (370)
T ss_dssp HHTBCTTCCHHH-HHHHHHH-CCSCEEEECCCSHHHHHHHHHTTCSEEEECCGGGTS------------------S---T
T ss_pred HhhcCccchHHH-HHHHHHH-hCCCEEEEecCCHHHHHHHHHcCCCEEEECCCCCcc------------------C---C
Confidence 1 11222233 4444432 4677777 6889999999999999999996543210 0 0
Q ss_pred hhHHHHhhhccCCcHHHHHHHhhcC--CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 021575 196 DDEVFTFAKKIAAPYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 196 ~d~~~~~~~~~~~~~~~i~~i~~~~--~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~ 257 (310)
...+.++.+.++++.. ++||+ ++|||++++|+.+++.+|||+|++|++++.
T Consensus 262 ---------~~~~~~~~l~~v~~~~~~~ipvi--a~GGI~~~~D~~k~l~~GAdaV~iGr~~l~ 314 (370)
T 1gox_A 262 ---------YVPATIMALEEVVKAAQGRIPVF--LDGGVRRGTDVFKALALGAAGVFIGRPVVF 314 (370)
T ss_dssp ---------TCCCHHHHHHHHHHHTTTSSCEE--EESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred ---------CcccHHHHHHHHHHHhCCCCEEE--EECCCCCHHHHHHHHHcCCCEEeecHHHHH
Confidence 1234567777777655 79998 789999999999999999999999999985
No 93
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.15 E-value=9.9e-11 Score=111.66 Aligned_cols=78 Identities=17% Similarity=0.223 Sum_probs=66.7
Q ss_pred HHHHHHHhhcC--CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhccCChhhhhhhhhh
Q 021575 210 YDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHYSDPEVLAEVSCG 287 (310)
Q Consensus 210 ~~~i~~i~~~~--~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~~~~~~~~~~~~~ 287 (310)
++.++++++.+ ++||| +.|||.|++|+.+++.+|||+|++||+++.. .|+ ..+++.+.++.+++..++.++++.
T Consensus 332 l~~I~~v~~~v~~~iPII--g~GGI~s~eDa~e~l~aGAd~VqIgra~l~~-GP~-~~~~i~~~L~~~l~~~G~~si~e~ 407 (415)
T 3i65_A 332 TKFICEMYNYTNKQIPII--ASGGIFSGLDALEKIEAGASVCQLYSCLVFN-GMK-SAVQIKRELNHLLYQRGYYNLKEA 407 (415)
T ss_dssp HHHHHHHHHHTTTCSCEE--ECSSCCSHHHHHHHHHHTEEEEEESHHHHHH-GGG-HHHHHHHHHHHHHHHTTCSSSTTT
T ss_pred HHHHHHHHHHhCCCCCEE--EECCCCCHHHHHHHHHcCCCEEEEcHHHHhc-CHH-HHHHHHHHHHHHHHHcCCCCHHHH
Confidence 46777887766 79998 7899999999999999999999999999861 354 566789999999998999999999
Q ss_pred cccc
Q 021575 288 LGEA 291 (310)
Q Consensus 288 ~~~~ 291 (310)
.|.+
T Consensus 408 ~G~~ 411 (415)
T 3i65_A 408 IGRK 411 (415)
T ss_dssp TTTT
T ss_pred hChh
Confidence 8864
No 94
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=99.15 E-value=8.9e-10 Score=103.47 Aligned_cols=233 Identities=15% Similarity=0.120 Sum_probs=138.5
Q ss_pred cceeecchhhhhhCcccccCCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhh--cCcceeeccc
Q 021575 23 PFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQS--VTIPVMAKAR 100 (310)
Q Consensus 23 ~~~~~~~~~~~~~~g~i~~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~--~~iPv~vk~~ 100 (310)
.+++..|++. +.+...+++++|.++.++|+-+++.-+ +...+....+++. .-.++.+...
T Consensus 53 ~~~l~~PIi~----ApM~~~~~~~lA~Ava~~Gglg~i~~~--------------~s~e~~~~~i~~~p~~l~~v~~~~g 114 (351)
T 2c6q_A 53 QTYSGVPIIA----ANMDTVGTFEMAKVLCKFSLFTAVHKH--------------YSLVQWQEFAGQNPDCLEHLAASSG 114 (351)
T ss_dssp CEEEECCEEE----CSSTTTSCHHHHHHHHHTTCEEECCTT--------------CCHHHHHHHHHHCGGGCTTEEEEEC
T ss_pred CccccCCEEE----CCCCCCCcHHHHHHHHHCCCEEEEcCC--------------CCHHHHHHHHhhCchhhheeEeecC
Confidence 7888899998 555668889999999999977652211 1112233333321 0012333222
Q ss_pred cC--cHHHHHHHHHc--CCCEEEe--CCCCCch---hHHHHHHhcCCCCcEEE-ecCCHHHHHHHHHhCCCEEEEcCCCC
Q 021575 101 IG--HFVEAQILEAI--GIDYVDE--SEVLTPA---DEENHINKHNFRIPFVC-GCRNLGEALRRIREGAAMIRTKGEAG 170 (310)
Q Consensus 101 ~~--~~~~a~~~~~a--Gad~Vi~--~~~~~~~---~~~~~i~~~~~~i~~~v-~~~t~~ea~~~~~~Gad~V~v~g~~~ 170 (310)
.. ..+.++.+.+. |++.+.. +.. .+. +..+.+++..+++++++ .+.|.++++++.++|+|+|.+....+
T Consensus 115 ~~~~~~~~~~~l~~~~~g~~~i~i~~~~g-~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~~g~G 193 (351)
T 2c6q_A 115 TGSSDFEQLEQILEAIPQVKYICLDVANG-YSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPG 193 (351)
T ss_dssp SSHHHHHHHHHHHHHCTTCCEEEEECSCT-TBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCS
T ss_pred CChHHHHHHHHHHhccCCCCEEEEEecCC-CcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEECCCCC
Confidence 22 23556666676 9998742 222 233 34444444333676665 58899999999999999998753322
Q ss_pred CcchHHHHHHHHhhccceEeecccChhHHHHhhhcc-CCcHHHHHHHh---hcCCCCEEEeCCCCCCCHHHHHHHHHcCC
Q 021575 171 TGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKI-AAPYDLVMQTK---QLGRLPVVHFAAGGVATPADAAMMMQLGC 246 (310)
Q Consensus 171 ~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~-~~~~~~i~~i~---~~~~iPVi~iA~GGI~t~~d~~~~l~~Ga 246 (310)
+... . + .+ .+. .+....+.++. +..++||+ ++|||+++.|+.+++.+||
T Consensus 194 ~~~~--~----r-------~~------------~g~~~p~~~~l~~v~~~~~~~~ipvI--a~GGI~~g~di~kAlalGA 246 (351)
T 2c6q_A 194 SVCT--T----R-------KK------------TGVGYPQLSAVMECADAAHGLKGHII--SDGGCSCPGDVAKAFGAGA 246 (351)
T ss_dssp TTBC--H----H-------HH------------HCBCCCHHHHHHHHHHHHHHTTCEEE--EESCCCSHHHHHHHHHTTC
T ss_pred cCcC--c----c-------cc------------CCCCccHHHHHHHHHHHHhhcCCcEE--EeCCCCCHHHHHHHHHcCC
Confidence 1110 0 0 00 011 22333333332 22479998 7899999999999999999
Q ss_pred CEEEEccccccCCCH---------------HHH--HHHHHHH---HhccC--------------Chhhhhhhhhhcccch
Q 021575 247 DGVFVGSGVFKSGDP---------------VKR--AQAIVRA---VTHYS--------------DPEVLAEVSCGLGEAM 292 (310)
Q Consensus 247 dgV~VGsai~~a~dp---------------~~~--a~~l~~~---i~~~~--------------~~~~~~~~~~~~~~~~ 292 (310)
|+|++|++|+.++.. +.+ ...+... .+.|. -.+.+..+...+...|
T Consensus 247 ~~V~vG~~fl~~~Es~~~~~~~~g~~~k~~~g~~~~~a~~~~~g~~~~~~~~~g~~~~~~~~g~v~~~~~~l~~~l~~~m 326 (351)
T 2c6q_A 247 DFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAGGVAEYRASEGKTVEVPFKGDVEHTIRDILGGIRSTC 326 (351)
T ss_dssp SEEEESTTTTTBTTSCSCEEEETTEEEEEEECTTBHHHHHHHSSSCCTTCCCCBCEEEEECCBCHHHHHHHHHHHHHHHH
T ss_pred CceeccHHHhcCccCcchhhhhcCeeeeeccccccHhhhhcccccccccccccceEEEeeccCcHHHHHHHHHHHHHHHH
Confidence 999999999864322 000 0001100 00011 1234567888888999
Q ss_pred hcccCccch
Q 021575 293 VGLNLSDHK 301 (310)
Q Consensus 293 ~~~~~~~~~ 301 (310)
-.+|.++++
T Consensus 327 ~~~G~~~i~ 335 (351)
T 2c6q_A 327 TYVGAAKLK 335 (351)
T ss_dssp HHHTCSBGG
T ss_pred HHcCCCCHH
Confidence 999988875
No 95
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.12 E-value=1.9e-09 Score=104.93 Aligned_cols=129 Identities=20% Similarity=0.239 Sum_probs=92.8
Q ss_pred HHHHHHHHHcCCCEEE--eCCCC--CchhHHHHHHhcCCCCcEEEe-cCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHH
Q 021575 104 FVEAQILEAIGIDYVD--ESEVL--TPADEENHINKHNFRIPFVCG-CRNLGEALRRIREGAAMIRTKGEAGTGNIIEAV 178 (310)
Q Consensus 104 ~~~a~~~~~aGad~Vi--~~~~~--~~~~~~~~i~~~~~~i~~~v~-~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~ 178 (310)
.+.++.+.++|+|.++ .++.- ...+..+.+++..++++++++ +.|.+.++.++++|+|.|.+.-.. |.+|++
T Consensus 283 ~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~aGAD~vkVGiGp--GSiCtT- 359 (556)
T 4af0_A 283 KDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAGADGLRIGMGS--GSICIT- 359 (556)
T ss_dssp HHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSC--STTBCC-
T ss_pred HHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHHcCCCEEeecCCC--Cccccc-
Confidence 4778899999999995 44432 245667777776678888887 889999999999999999986322 233310
Q ss_pred HHHHhhccceEeecccChhHHHHhhhccCCc-HHHHHHH---hhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccc
Q 021575 179 RHVRSVMGDIRVLRNMDDDEVFTFAKKIAAP-YDLVMQT---KQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSG 254 (310)
Q Consensus 179 ~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~-~~~i~~i---~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsa 254 (310)
|.+. +.+.| ...+.++ ++...+||| |.|||+++.|+.+++.+|||.||+|+.
T Consensus 360 ----------r~v~------------GvG~PQ~tAi~~~a~~a~~~~vpvI--ADGGI~~sGDi~KAlaaGAd~VMlGsl 415 (556)
T 4af0_A 360 ----------QEVM------------AVGRPQGTAVYAVAEFASRFGIPCI--ADGGIGNIGHIAKALALGASAVMMGGL 415 (556)
T ss_dssp ----------TTTC------------CSCCCHHHHHHHHHHHHGGGTCCEE--EESCCCSHHHHHHHHHTTCSEEEESTT
T ss_pred ----------cccc------------CCCCcHHHHHHHHHHHHHHcCCCEE--ecCCcCcchHHHHHhhcCCCEEEEchh
Confidence 1111 22222 2223222 233579998 889999999999999999999999999
Q ss_pred cccCC
Q 021575 255 VFKSG 259 (310)
Q Consensus 255 i~~a~ 259 (310)
|...+
T Consensus 416 lAGt~ 420 (556)
T 4af0_A 416 LAGTT 420 (556)
T ss_dssp TTTBT
T ss_pred hcccc
Confidence 98754
No 96
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.11 E-value=3.5e-10 Score=105.49 Aligned_cols=48 Identities=29% Similarity=0.490 Sum_probs=42.1
Q ss_pred CcHHHHHHHhhcC-CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 021575 208 APYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 208 ~~~~~i~~i~~~~-~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~ 257 (310)
+.++.+.++++.. ++||+ ++|||++++|+.+++.+|||+|++|++++.
T Consensus 242 ~~~~~l~~v~~~~~~ipvi--a~GGI~~~~d~~kal~~GAd~V~igr~~l~ 290 (332)
T 1vcf_A 242 PTARAILEVREVLPHLPLV--ASGGVYTGTDGAKALALGADLLAVARPLLR 290 (332)
T ss_dssp BHHHHHHHHHHHCSSSCEE--EESSCCSHHHHHHHHHHTCSEEEECGGGHH
T ss_pred cHHHHHHHHHHhcCCCeEE--EECCCCCHHHHHHHHHhCCChHhhhHHHHH
Confidence 4466777777766 79998 789999999999999999999999999995
No 97
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.10 E-value=2.9e-10 Score=111.77 Aligned_cols=87 Identities=22% Similarity=0.372 Sum_probs=63.5
Q ss_pred CCcEEE-ecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHh
Q 021575 139 RIPFVC-GCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTK 217 (310)
Q Consensus 139 ~i~~~v-~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~ 217 (310)
++++++ .+.+.++++++.++|+|.|.+++++++.- + ...++++.+.++.
T Consensus 343 ~~PvivKgv~~~e~A~~a~~aGad~I~vs~hgG~~~-------------------d-----------~~~~~~~~l~~v~ 392 (511)
T 1kbi_A 343 KLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGGRQL-------------------D-----------FSRAPIEVLAETM 392 (511)
T ss_dssp SSCEEEEEECSHHHHHHHHHTTCSEEEECCTTTTSS-------------------T-----------TCCCHHHHHHHHH
T ss_pred CCcEEEEeCCCHHHHHHHHHcCCCEEEEcCCCCccC-------------------C-----------CCCchHHHHHHHH
Confidence 444444 35567888888899999998876544210 0 1123455555555
Q ss_pred hcC-------CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 021575 218 QLG-------RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 218 ~~~-------~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~ 257 (310)
+.. ++||+ ++|||+++.|+.+++.+|||+|++|++++.
T Consensus 393 ~~v~~~~~~~~ipVi--a~GGI~~g~Dv~kaLalGAdaV~iGr~~l~ 437 (511)
T 1kbi_A 393 PILEQRNLKDKLEVF--VDGGVRRGTDVLKALCLGAKGVGLGRPFLY 437 (511)
T ss_dssp HHHHTTTCBTTBEEE--EESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred HHHHhhccCCCcEEE--EECCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 433 79998 789999999999999999999999998885
No 98
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.08 E-value=4.1e-09 Score=100.40 Aligned_cols=204 Identities=16% Similarity=0.201 Sum_probs=124.1
Q ss_pred eccCcceeecchhhhhhCcccccCCCHHHHHHHHHcCCcEEEecc----------CCccccccc---------CCCC---
Q 021575 19 TKKSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALE----------RVPADIRSQ---------GGVA--- 76 (310)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~g~i~~~~~~~~A~~~~~~Ga~~i~~L~----------~~~~~~~~~---------~G~~--- 76 (310)
++...+.+..|++. ..+..++++++|+++.++|+-+++.-+ ...+++.+- .+..
T Consensus 59 t~l~g~~l~~Pii~----Apm~g~~~~~~a~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~~d~~~g~~~~~q~ 134 (393)
T 2qr6_A 59 WHIDAYKFDLPFMN----HPSDALASPEFVIEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEEGDQAAATRTLQEL 134 (393)
T ss_dssp EEETTEEESSSEEE----CCCTTTCCHHHHHHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEcccccCCCeEe----CCCCCcccHHHHHHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHhcCCCccchhhhhc
Confidence 33455667788887 445578889999999999988775431 000000000 0000
Q ss_pred -CCC-CHH----HHHHHHhhcCcceeeccccC-cHHHHHHHHHcCCCEEEeC--C----CC----CchhHHHHHHhcCCC
Q 021575 77 -RMS-DPQ----LIKEIKQSVTIPVMAKARIG-HFVEAQILEAIGIDYVDES--E----VL----TPADEENHINKHNFR 139 (310)
Q Consensus 77 -~~~-~~~----~i~~i~~~~~iPv~vk~~~~-~~~~a~~~~~aGad~Vi~~--~----~~----~~~~~~~~i~~~~~~ 139 (310)
..+ +.+ .++++++. +.|++++.... ..+.++.+.++|+|.+... . .. ...++.. +.+. .+
T Consensus 135 ~~~~~d~~~~~~~i~~~~~~-g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~-l~~~-~~ 211 (393)
T 2qr6_A 135 HAAPLDTELLSERIAQVRDS-GEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKE-FIGS-LD 211 (393)
T ss_dssp HHSCCCHHHHHHHHHHHHHT-TSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHH-HHHH-CS
T ss_pred ccccCCHHHHHHHHHHHhhc-CCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHH-HHHh-cC
Confidence 001 222 33333433 77877765433 3456777888999998521 1 11 2233333 3332 46
Q ss_pred CcEEE-ecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhcc-CCcHHHHHHHh
Q 021575 140 IPFVC-GCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKI-AAPYDLVMQTK 217 (310)
Q Consensus 140 i~~~v-~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~-~~~~~~i~~i~ 217 (310)
+++++ ++.|.++++++.+.|+|.|.+ +.++.+. + .+. .. .+.++.+.++.
T Consensus 212 ~pvi~ggi~t~e~a~~~~~~Gad~i~v-g~Gg~~~--------~-------~~~------------~~g~~~~~~l~~v~ 263 (393)
T 2qr6_A 212 VPVIAGGVNDYTTALHMMRTGAVGIIV-GGGENTN--------S-------LAL------------GMEVSMATAIADVA 263 (393)
T ss_dssp SCEEEECCCSHHHHHHHHTTTCSEEEE-SCCSCCH--------H-------HHT------------SCCCCHHHHHHHHH
T ss_pred CCEEECCcCCHHHHHHHHHcCCCEEEE-CCCcccc--------c-------ccC------------CCCCChHHHHHHHH
Confidence 77766 588999999999999999998 4322110 0 000 11 23355555444
Q ss_pred hc-------C---CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 021575 218 QL-------G---RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 218 ~~-------~---~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~ 259 (310)
+. . ++||+ ++|||+++.|+.+++.+|||+|++|++++.+.
T Consensus 264 ~~~~~~~~~~~~~~ipvi--a~GGI~~~~dv~kalalGA~~V~iG~~~l~~~ 313 (393)
T 2qr6_A 264 AARRDYLDETGGRYVHII--ADGSIENSGDVVKAIACGADAVVLGSPLARAE 313 (393)
T ss_dssp HHHHHHHHHHTSCCCEEE--ECSSCCSHHHHHHHHHHTCSEEEECGGGGGST
T ss_pred HHHHHhHhhcCCcceEEE--EECCCCCHHHHHHHHHcCCCEEEECHHHHcCC
Confidence 43 2 28998 89999999999999999999999999997754
No 99
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.08 E-value=2.4e-09 Score=104.79 Aligned_cols=129 Identities=17% Similarity=0.183 Sum_probs=91.1
Q ss_pred HHHHHHHHHcCCCEEE-eCCCCCch---hHHHHHHhcCCCCcEEEe-cCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHH
Q 021575 104 FVEAQILEAIGIDYVD-ESEVLTPA---DEENHINKHNFRIPFVCG-CRNLGEALRRIREGAAMIRTKGEAGTGNIIEAV 178 (310)
Q Consensus 104 ~~~a~~~~~aGad~Vi-~~~~~~~~---~~~~~i~~~~~~i~~~v~-~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~ 178 (310)
.+.++.+.++|+|.+. .+...... +..+.+++..+++++++. +.+.++++.+.++|+|+|.+....++. +..
T Consensus 231 ~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~vg~g~Gs~--~~t- 307 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKVGIGPGSI--CTT- 307 (490)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTT--CHH-
T ss_pred HHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcCCCEEEECCCCCcC--CCc-
Confidence 5778999999999995 22222222 455555554457777665 899999999999999999984322221 110
Q ss_pred HHHHhhccceEeecccChhHHHHhhhcc-CCcHHHHHHHhh---cCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccc
Q 021575 179 RHVRSVMGDIRVLRNMDDDEVFTFAKKI-AAPYDLVMQTKQ---LGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSG 254 (310)
Q Consensus 179 ~~~r~~~~~~~~l~~~~~d~~~~~~~~~-~~~~~~i~~i~~---~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsa 254 (310)
+. + .+. .+.+..+.++.+ ..++||| ++|||++++|+.+++.+|||+|++||+
T Consensus 308 ---~~-------~------------~g~g~p~~~~l~~v~~~~~~~~iPVI--a~GGI~~~~di~kal~~GAd~V~vGs~ 363 (490)
T 4avf_A 308 ---RI-------V------------AGVGVPQISAIANVAAALEGTGVPLI--ADGGIRFSGDLAKAMVAGAYCVMMGSM 363 (490)
T ss_dssp ---HH-------H------------TCBCCCHHHHHHHHHHHHTTTTCCEE--EESCCCSHHHHHHHHHHTCSEEEECTT
T ss_pred ---cc-------c------------CCCCccHHHHHHHHHHHhccCCCcEE--EeCCCCCHHHHHHHHHcCCCeeeecHH
Confidence 00 0 012 334566666655 2479998 789999999999999999999999999
Q ss_pred cccCC
Q 021575 255 VFKSG 259 (310)
Q Consensus 255 i~~a~ 259 (310)
|+.++
T Consensus 364 ~~~~~ 368 (490)
T 4avf_A 364 FAGTE 368 (490)
T ss_dssp TTTBT
T ss_pred HhcCC
Confidence 99854
No 100
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.07 E-value=6.8e-10 Score=104.93 Aligned_cols=95 Identities=22% Similarity=0.284 Sum_probs=71.4
Q ss_pred HHHHHhcCCCCcEEE-ecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCC
Q 021575 130 ENHINKHNFRIPFVC-GCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAA 208 (310)
Q Consensus 130 ~~~i~~~~~~i~~~v-~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~ 208 (310)
++.+++. .++++++ .+.+.++++++.++|+|+|.++++++... + ...+
T Consensus 221 i~~lr~~-~~~PvivK~v~~~e~a~~a~~~Gad~I~vs~~ggr~~-------------------~-----------~g~~ 269 (368)
T 2nli_A 221 IEEIAGH-SGLPVFVKGIQHPEDADMAIKRGASGIWVSNHGARQL-------------------Y-----------EAPG 269 (368)
T ss_dssp HHHHHHH-SSSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGTSC-------------------S-----------SCCC
T ss_pred HHHHHHH-cCCCEEEEcCCCHHHHHHHHHcCCCEEEEcCCCcCCC-------------------C-----------CCCC
Confidence 4444442 3556555 47889999999999999999977543110 0 1234
Q ss_pred cHHHHHHHhhcC--CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 021575 209 PYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 209 ~~~~i~~i~~~~--~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~ 257 (310)
+++.+.++++.. ++||+ ++|||++++|+.+++.+|||+|++|++++.
T Consensus 270 ~~~~l~~v~~~v~~~ipVi--a~GGI~~g~D~~kalalGAd~V~iGr~~l~ 318 (368)
T 2nli_A 270 SFDTLPAIAERVNKRVPIV--FDSGVRRGEHVAKALASGADVVALGRPVLF 318 (368)
T ss_dssp HHHHHHHHHHHHTTSSCEE--ECSSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred hHHHHHHHHHHhCCCCeEE--EECCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 567777777654 69998 899999999999999999999999998875
No 101
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=99.07 E-value=1.2e-09 Score=102.15 Aligned_cols=95 Identities=20% Similarity=0.310 Sum_probs=72.3
Q ss_pred HHHHHhcCCCCcEEE-ecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCC
Q 021575 130 ENHINKHNFRIPFVC-GCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAA 208 (310)
Q Consensus 130 ~~~i~~~~~~i~~~v-~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~ 208 (310)
.+.+++. .++++++ .+.+.++++++.+.|+|.|.++|++++.. + ...+
T Consensus 209 i~~lr~~-~~~PvivK~v~~~e~A~~a~~~GaD~I~vsn~GG~~~---------------------d---------~~~~ 257 (352)
T 3sgz_A 209 LSLLQSI-TRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQL---------------------D---------EVSA 257 (352)
T ss_dssp HHHHHHH-CCSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGTSS---------------------C---------SSCC
T ss_pred HHHHHHh-cCCCEEEEecCcHHHHHHHHHcCCCEEEEeCCCCCcc---------------------C---------CCcc
Confidence 4444432 3566655 47899999999999999999987644210 0 1234
Q ss_pred cHHHHHHHhhcC--CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 021575 209 PYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 209 ~~~~i~~i~~~~--~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~ 257 (310)
+++.+.++.+.. ++||+ ++|||+++.|+.+++.+|||+|++|++++-
T Consensus 258 ~~~~L~~i~~av~~~ipVi--a~GGI~~g~Dv~kaLalGA~aV~iGr~~l~ 306 (352)
T 3sgz_A 258 SIDALREVVAAVKGKIEVY--MDGGVRTGTDVLKALALGARCIFLGRPILW 306 (352)
T ss_dssp HHHHHHHHHHHHTTSSEEE--EESSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred HHHHHHHHHHHhCCCCeEE--EECCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 567777776544 79998 789999999999999999999999998884
No 102
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.07 E-value=6.4e-10 Score=105.89 Aligned_cols=95 Identities=20% Similarity=0.306 Sum_probs=70.8
Q ss_pred HHHHHhcCCCCcEEE-ecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCC
Q 021575 130 ENHINKHNFRIPFVC-GCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAA 208 (310)
Q Consensus 130 ~~~i~~~~~~i~~~v-~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~ 208 (310)
++.+++ ..++++++ .+.+.++++++.++|+|.|.++++++... + ...+
T Consensus 244 i~~lr~-~~~~PvivKgv~~~e~A~~a~~aGad~I~vs~~ggr~~-------------------~-----------~g~~ 292 (392)
T 2nzl_A 244 IKWLRR-LTSLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQL-------------------D-----------GVPA 292 (392)
T ss_dssp HHHHC---CCSCEEEEEECCHHHHHHHHHTTCCEEEECCGGGTSS-------------------T-----------TCCC
T ss_pred HHHHHH-hhCCCEEEEecCCHHHHHHHHHcCCCEEEeCCCCCCcC-------------------C-----------CCcC
Confidence 444433 23566666 57889999999999999999977543110 0 1234
Q ss_pred cHHHHHHHhhcC--CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 021575 209 PYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 209 ~~~~i~~i~~~~--~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~ 257 (310)
+++.+.++++.. ++||+ ++|||++++|+.+++.+|||+|++|++++.
T Consensus 293 ~~~~l~~v~~av~~~ipVi--a~GGI~~g~Dv~kalalGAd~V~iGr~~l~ 341 (392)
T 2nzl_A 293 TIDVLPEIVEAVEGKVEVF--LDGGVRKGTDVLKALALGAKAVFVGRPIVW 341 (392)
T ss_dssp HHHHHHHHHHHHTTSSEEE--ECSSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred hHHHHHHHHHHcCCCCEEE--EECCCCCHHHHHHHHHhCCCeeEECHHHHH
Confidence 567777776654 59998 899999999999999999999999998885
No 103
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.06 E-value=7.7e-10 Score=117.31 Aligned_cols=190 Identities=19% Similarity=0.212 Sum_probs=113.2
Q ss_pred HHHHHHHHcCCcEEEecc-CCccccc-ccCCCCCCCCHH----HHHHHHhhcCcceeeccccCc---HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALE-RVPADIR-SQGGVARMSDPQ----LIKEIKQSVTIPVMAKARIGH---FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~-~~~~~~~-~~~G~~~~~~~~----~i~~i~~~~~iPv~vk~~~~~---~~~a~~~~~aGad 116 (310)
+.++.++++|+++| ++| .+|...+ ...|+.++.+++ .++.+++.+++||++|...+. .+.++.+.++|+|
T Consensus 652 ~~a~~~~~~g~d~i-ein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~~~~~~~~~~a~~~~~~G~d 730 (1025)
T 1gte_A 652 ELSRKAEASGADAL-ELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGAD 730 (1025)
T ss_dssp HHHHHHHHTTCSEE-EEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEECSCSSCHHHHHHHHHHHTCS
T ss_pred HHHHHHHhcCCCEE-EEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeCCChHHHHHHHHHHHHcCCC
Confidence 46777788999987 666 2232221 122455555555 555567778999999987642 3456777777777
Q ss_pred EEEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccCh
Q 021575 117 YVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDD 196 (310)
Q Consensus 117 ~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~ 196 (310)
+|+.++.+... .+.++.. + +.-.+..|++...+. +. .+
T Consensus 731 ~i~v~Nt~~~~--------~~~~~~~-----~----------~~~~~~~~gr~~~gg-----------------~s--g~ 768 (1025)
T 1gte_A 731 GVTATNTVSGL--------MGLKADG-----T----------PWPAVGAGKRTTYGG-----------------VS--GT 768 (1025)
T ss_dssp EEEECCCEEEC--------CCBCTTS-----C----------BSSCBTTTTBBCCEE-----------------EE--SG
T ss_pred EEEEecccccc--------ccccccc-----c----------ccccccccccccCCC-----------------CC--cc
Confidence 77533211000 0000000 0 000000011100000 00 00
Q ss_pred hHHHHhhhccCCcHHHHHHHhhcC-CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhcc
Q 021575 197 DEVFTFAKKIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHY 275 (310)
Q Consensus 197 d~~~~~~~~~~~~~~~i~~i~~~~-~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~ 275 (310)
. .....++.++++++.. ++||+ ++|||.|++|+.+++.+|||+|++|++++. +|+...+.+.+.++.+
T Consensus 769 ~-------~~~~~~~~v~~v~~~~~~ipvi--~~GGI~s~~da~~~l~~Ga~~v~vg~~~l~--~~~~~~~~~~~~l~~~ 837 (1025)
T 1gte_A 769 A-------IRPIALRAVTTIARALPGFPIL--ATGGIDSAESGLQFLHSGASVLQVCSAVQN--QDFTVIQDYCTGLKAL 837 (1025)
T ss_dssp G-------GHHHHHHHHHHHHHHSTTCCEE--EESSCCSHHHHHHHHHTTCSEEEESHHHHT--SCTTHHHHHHHHHHHH
T ss_pred c-------chhHHHHHHHHHHHHcCCCCEE--EecCcCCHHHHHHHHHcCCCEEEEeecccc--CCccHHHHHHHHHHHH
Confidence 0 0011145677777766 89998 789999999999999999999999999996 3445677788888888
Q ss_pred CChhhhhhhhhhcc
Q 021575 276 SDPEVLAEVSCGLG 289 (310)
Q Consensus 276 ~~~~~~~~~~~~~~ 289 (310)
+...++.++++..|
T Consensus 838 l~~~G~~~i~~l~g 851 (1025)
T 1gte_A 838 LYLKSIEELQGWDG 851 (1025)
T ss_dssp HHHTTCGGGTTSBT
T ss_pred HHHcCCCCHHHHhC
Confidence 88888888888777
No 104
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=99.06 E-value=1.3e-09 Score=121.30 Aligned_cols=207 Identities=12% Similarity=0.118 Sum_probs=141.7
Q ss_pred cceeecchhhhhhCcccccCCCHHHHHHHHHcCCcEEE-eccCCcccccccCCCCCCCCHHHHHHHHhhc--Ccceeecc
Q 021575 23 PFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVM-ALERVPADIRSQGGVARMSDPQLIKEIKQSV--TIPVMAKA 99 (310)
Q Consensus 23 ~~~~~~~~~~~~~~g~i~~~~~~~~A~~~~~~Ga~~i~-~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~--~iPv~vk~ 99 (310)
.|+ +.|+++ +|+-..++++++|.++.++|.-+++ .... .......+.++++++.. +.|+.++.
T Consensus 579 ~lg-~~PIi~---a~M~~~vs~~~LaaAva~aGglG~i~g~g~----------~~~e~l~~~i~~vk~~~~~~~p~gvN~ 644 (2060)
T 2uva_G 579 LLG-VPPVMV---AGMTPTTVPWDFVAATMNAGYHIELAGGGY----------YNAQKMSDAISKIEKAIPPGRGITVNL 644 (2060)
T ss_dssp HHT-SCSEEE---CCCTTTTCSHHHHHHHHHTTCEECEEGGGC----------CSHHHHHHHHHHHGGGSCTTCCEEEEE
T ss_pred ccc-cceEEe---cCCCCccccHHHHHHHHHCCCEEEECcCCC----------CCHHHHHHHHHHHHhhcccCCCeEecc
Confidence 355 788888 5544478999999999999988764 2210 00001135677777777 68999986
Q ss_pred cc-Cc------HHHHHHHHHcCCCE--EEeCCCC-CchhHHHHHHhcCCCCcEEEecCCHHHHHHH----HHhCCCEEE-
Q 021575 100 RI-GH------FVEAQILEAIGIDY--VDESEVL-TPADEENHINKHNFRIPFVCGCRNLGEALRR----IREGAAMIR- 164 (310)
Q Consensus 100 ~~-~~------~~~a~~~~~aGad~--Vi~~~~~-~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~----~~~Gad~V~- 164 (310)
.. .. .+.++.+.+.|++. |...... +.+++.+.++.. ++.++..+.+..++.++ .++|+|.+.
T Consensus 645 ~~~~p~~~~~~~~~~~~~~~~gv~i~gv~~~~G~p~~e~~~~~l~~~--gi~~i~~v~~~~~a~~~v~~l~~aG~D~iV~ 722 (2060)
T 2uva_G 645 IYVNPRAMGWQIPLLGRLRADGVPIEGLTIGAGVPSIEVANEYIQTL--GIRHISFKPGSVDAIQQVINIAKANPTFPII 722 (2060)
T ss_dssp ETTCTTHHHHHHHHHHHHHTTTCCEEEEEEESSCCCHHHHHHHHHHS--CCSEEEECCCSHHHHHHHHHHHHHCTTSCEE
T ss_pred cccCcccchhHHHHHHHHHHcCCCcceEeecCCCCCHHHHHHHHHHc--CCeEEEecCCHHHHHHHHHHHHHcCCCEEEE
Confidence 54 21 14568888999999 7654444 344677777664 66666667777888877 789999987
Q ss_pred --EcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHH
Q 021575 165 --TKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMM 242 (310)
Q Consensus 165 --v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l 242 (310)
+.|...+|+. ... | ...+.+.++.++++..++||+ ++|||.+++++.+++
T Consensus 723 ~q~~G~eaGGH~------------------g~~-d-------~~~~~l~lv~~i~~~~~ipvi--aaGGI~~g~~i~aal 774 (2060)
T 2uva_G 723 LQWTGGRGGGHH------------------SFE-D-------FHQPILLMYSRIRKCSNIVLV--AGSGFGGSEDTYPYL 774 (2060)
T ss_dssp EEECCTTSSSSC------------------CSC-C-------SHHHHHHHHHHHHTSTTEEEE--EESSCCSHHHHHHHH
T ss_pred eeeEcccCCCCC------------------Ccc-c-------ccchHHHHHHHHHHHcCCCEE--EeCCCCCHHHHHHHh
Confidence 6665444431 000 0 001236788999998899998 789999999999999
Q ss_pred -----------HcCCCEEEEccccccCCCHHHHHHHHHHHHhc
Q 021575 243 -----------QLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTH 274 (310)
Q Consensus 243 -----------~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~ 274 (310)
.+|||||++||+++-++.. .+...+++++.+
T Consensus 775 tg~ws~~~g~palGAdgV~~GT~f~~t~Ea-~~s~~~K~~lv~ 816 (2060)
T 2uva_G 775 TGSWSTKFGYPPMPFDGCMFGSRMMTAKEA-HTSKQAKQAIVD 816 (2060)
T ss_dssp HTCGGGTTTSCCCCCSCEEESGGGGGBTTS-CCCHHHHHHHHT
T ss_pred cCcchhhcCCCCCCCCEEEEchhhhcCcCC-CCCHHHHHHHHh
Confidence 9999999999999986532 122335555544
No 105
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.02 E-value=8.4e-10 Score=106.42 Aligned_cols=78 Identities=17% Similarity=0.221 Sum_probs=66.1
Q ss_pred HHHHHHHhhcC--CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhccCChhhhhhhhhh
Q 021575 210 YDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHYSDPEVLAEVSCG 287 (310)
Q Consensus 210 ~~~i~~i~~~~--~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~~~~~~~~~~~~~ 287 (310)
++.++++++.+ ++||| +.|||.|++|+.+++.+|||+|++||+++. .+|+ ..+++.+.+..++...++.++++.
T Consensus 360 l~~i~~v~~~v~~~iPVI--g~GGI~s~~DA~e~l~aGAd~Vqigrall~-~gP~-l~~~i~~~l~~~l~~~G~~si~e~ 435 (443)
T 1tv5_A 360 TKFICEMYNYTNKQIPII--ASGGIFSGLDALEKIEAGASVCQLYSCLVF-NGMK-SAVQIKRELNHLLYQRGYYNLKEA 435 (443)
T ss_dssp HHHHHHHHHHTTTCSCEE--EESSCCSHHHHHHHHHTTEEEEEESHHHHH-HGGG-HHHHHHHHHHHHHHHHTCSSSGGG
T ss_pred HHHHHHHHHHcCCCCcEE--EECCCCCHHHHHHHHHcCCCEEEEcHHHHh-cChH-HHHHHHHHHHHHHHHhCCCCHHHH
Confidence 56778888776 89998 789999999999999999999999999764 2564 556688888888888889999998
Q ss_pred cccc
Q 021575 288 LGEA 291 (310)
Q Consensus 288 ~~~~ 291 (310)
.|.+
T Consensus 436 ~G~~ 439 (443)
T 1tv5_A 436 IGRK 439 (443)
T ss_dssp TTTT
T ss_pred hhhh
Confidence 8865
No 106
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.01 E-value=4.9e-09 Score=102.76 Aligned_cols=129 Identities=16% Similarity=0.163 Sum_probs=90.9
Q ss_pred HHHHHHHHHcCCCEEEe-CCCCC---chhHHHHHHhcCCCCcEEEe-cCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHH
Q 021575 104 FVEAQILEAIGIDYVDE-SEVLT---PADEENHINKHNFRIPFVCG-CRNLGEALRRIREGAAMIRTKGEAGTGNIIEAV 178 (310)
Q Consensus 104 ~~~a~~~~~aGad~Vi~-~~~~~---~~~~~~~i~~~~~~i~~~v~-~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~ 178 (310)
.+.++.+.++|+|.|.. +.... ..+..+.+++..+++++++. +.+.++++.+.++|+|+|.+.+..++....
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg~g~Gs~~~t--- 309 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTT--- 309 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHTCSEEEECSSCCTTBCH---
T ss_pred HHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhCCCEEEECCCCCcCccc---
Confidence 57889999999999952 22112 22555556554457777664 899999999999999999986432221100
Q ss_pred HHHHhhccceEeecccChhHHHHhhhcc-CCcHHHHHHHhh---cCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccc
Q 021575 179 RHVRSVMGDIRVLRNMDDDEVFTFAKKI-AAPYDLVMQTKQ---LGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSG 254 (310)
Q Consensus 179 ~~~r~~~~~~~~l~~~~~d~~~~~~~~~-~~~~~~i~~i~~---~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsa 254 (310)
+. + ... .+.+..+.++.+ ..++||+ ++|||++++|+.+++.+|||+|++||+
T Consensus 310 ---r~-------~------------~g~g~p~~~~i~~v~~~~~~~~iPVI--a~GGI~~~~di~kala~GAd~V~iGs~ 365 (496)
T 4fxs_A 310 ---RI-------V------------TGVGVPQITAIADAAGVANEYGIPVI--ADGGIRFSGDISKAIAAGASCVMVGSM 365 (496)
T ss_dssp ---HH-------H------------HCCCCCHHHHHHHHHHHHGGGTCCEE--EESCCCSHHHHHHHHHTTCSEEEESTT
T ss_pred ---cc-------c------------cCCCccHHHHHHHHHHHhccCCCeEE--EeCCCCCHHHHHHHHHcCCCeEEecHH
Confidence 00 0 012 234555555554 2479998 889999999999999999999999999
Q ss_pred cccCC
Q 021575 255 VFKSG 259 (310)
Q Consensus 255 i~~a~ 259 (310)
|+.++
T Consensus 366 f~~t~ 370 (496)
T 4fxs_A 366 FAGTE 370 (496)
T ss_dssp TTTBT
T ss_pred HhcCC
Confidence 99864
No 107
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.00 E-value=6.8e-10 Score=126.98 Aligned_cols=192 Identities=18% Similarity=0.202 Sum_probs=132.8
Q ss_pred CcceeecchhhhhhCcccccCCCHHHHHHHHHcCCcEEEeccCCcccccccCCC-CCCCCHHHHHHHHhhc--Ccceeec
Q 021575 22 SPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGV-ARMSDPQLIKEIKQSV--TIPVMAK 98 (310)
Q Consensus 22 ~~~~~~~~~~~~~~~g~i~~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~-~~~~~~~~i~~i~~~~--~iPv~vk 98 (310)
..|+ ++|+++ +|+....+++++|.++.++|.-+.+.- +|. ......+.++++++.+ +.|+.++
T Consensus 423 ~~lg-~~PIi~---a~M~~~~s~~~LaaAVs~AGglG~l~~----------~g~~~~~~l~~~i~~~r~~~~~~~p~~vN 488 (3089)
T 3zen_D 423 RLTG-RSPILL---AGMTPTTVDAKIVAAAANAGHWAELAG----------GGQVTEQIFNDRIAELETLLEPGRAIQFN 488 (3089)
T ss_dssp HHHS-SCSEEE---CCCHHHHTSHHHHHHHHHTTCEEEECS----------TTCCSHHHHHHHHHHHHHHSCTTCCCEEE
T ss_pred hhcC-CCCEEe---CCCcCCcCCHHHHHHHHhCCCceeecC----------CCCCCHHHHHHHHHHHHHhcCCCCceeec
Confidence 4466 788888 565555678999999999998876311 111 0011135677777777 6788776
Q ss_pred ccc-Cc---------HHHHHHHHHcC--CCEEEeCCCCC-chhHHHHHHh-cCCCCcEEE-ecCCHHHHHHHHHhCCC--
Q 021575 99 ARI-GH---------FVEAQILEAIG--IDYVDESEVLT-PADEENHINK-HNFRIPFVC-GCRNLGEALRRIREGAA-- 161 (310)
Q Consensus 99 ~~~-~~---------~~~a~~~~~aG--ad~Vi~~~~~~-~~~~~~~i~~-~~~~i~~~v-~~~t~~ea~~~~~~Gad-- 161 (310)
... +. ...++.+.+.| +|+|+.+.+++ .++..+++.. +..++.++. .+.|.++++++.+.|+|
T Consensus 489 l~~~~p~~~~~~~g~~~~~~~~~~~g~~vdgv~~~aG~P~~ee~~~~i~~l~~~Gi~~i~~~~~t~~~a~~~~~i~~d~~ 568 (3089)
T 3zen_D 489 TLFLDPYLWKLQVGGKRLVQRARQSGAPIDGLVVSAGIPDLEEAVDIIDELNEVGISHVVFKPGTVEQIRSVIRIAAEVP 568 (3089)
T ss_dssp EECSCHHHHHHHHHHHHHHHHHHHTTCSCCEEEEESSCCCHHHHHHHHTSTTHHHHCSEEECCCSHHHHHHHHHHHTTST
T ss_pred hhhcChhhhhhccCHHHHHHHHHHcCCCceEEEEeCCCCchhHhHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHhhhhcC
Confidence 543 21 24578889999 88897665555 3444444433 223544444 78899999999999888
Q ss_pred ----EEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHH----HHHHHhhcCCCCEEEeCCCCCC
Q 021575 162 ----MIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYD----LVMQTKQLGRLPVVHFAAGGVA 233 (310)
Q Consensus 162 ----~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~----~i~~i~~~~~iPVi~iA~GGI~ 233 (310)
+|.+.|..++||.. ...... .+.++++..++||+ ++|||.
T Consensus 569 ~~~y~vv~~G~eaGGH~g------------------------------~~~~~~ll~~~~~~ir~~~~iPVi--aaGGI~ 616 (3089)
T 3zen_D 569 TKPVIVHIEGGRAGGHHS------------------------------WEDLDDLLLATYSELRSRSNITIC--VGGGIG 616 (3089)
T ss_dssp TSCEEEEECCSSSSEECC------------------------------SCCHHHHHHHHHHHHTTCTTEEEE--EESSCC
T ss_pred CCcEEEEEeCCCcCCCCC------------------------------cccHHHHHHHHHHHHhhcCCCeEE--EEeCCC
Confidence 77777776656510 011122 34777887889998 789999
Q ss_pred CHHHHHHHH-----------HcCCCEEEEccccccCC
Q 021575 234 TPADAAMMM-----------QLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 234 t~~d~~~~l-----------~~GadgV~VGsai~~a~ 259 (310)
+++++..++ .+|||||++||+|+.+.
T Consensus 617 d~~~vaaal~g~ws~~~~~p~lGAdGV~vGTrfl~t~ 653 (3089)
T 3zen_D 617 TPERSAEYLSGRWAEVHGYPLMPIDGILVGTAAMATL 653 (3089)
T ss_dssp CTTTTHHHHHTGGGGTTTCCCCCCSEEECSSTTTTCT
T ss_pred CHHHHHHHhccccccccCccCCCCCEEEecHHHHhCc
Confidence 999999999 99999999999999865
No 108
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.99 E-value=1.2e-08 Score=100.43 Aligned_cols=181 Identities=15% Similarity=0.189 Sum_probs=111.1
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhh-------cCcceeecccc--CcHHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQS-------VTIPVMAKARI--GHFVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~-------~~iPv~vk~~~--~~~~~a~~~~~aGad 116 (310)
++...+.+.+...+..+|.. ...-|. ....+.++.+... ..+++.+.... ...+.++.+.++|+|
T Consensus 197 eal~~m~~~~i~~lpVVDe~----g~l~Gi--IT~~Dil~~~~~p~a~~D~~~rl~V~aavg~~~d~~era~aLveaGvd 270 (511)
T 3usb_A 197 EAEKILQKYKIEKLPLVDNN----GVLQGL--ITIKDIEKVIEFPNSAKDKQGRLLVGAAVGVTADAMTRIDALVKASVD 270 (511)
T ss_dssp HHHHHHHHHTCSEEEEECTT----SBEEEE--EEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEEEeCC----CCEeee--ccHHHHHHhhhcccchhhhccceeeeeeeeeccchHHHHHHHHhhccc
Confidence 56677788888877444310 111111 1223455554321 12333333322 235778889999999
Q ss_pred EEEe-CCCCC---chhHHHHHHhcCCCCcEEE-ecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEee
Q 021575 117 YVDE-SEVLT---PADEENHINKHNFRIPFVC-GCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVL 191 (310)
Q Consensus 117 ~Vi~-~~~~~---~~~~~~~i~~~~~~i~~~v-~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l 191 (310)
.+.. +..-. ..+.++.+++..+++++++ .+.+.++++.+.++|+|+|.+....++ ++.. + .+
T Consensus 271 ~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~aGad~i~vg~g~gs--i~~~----~-------~~ 337 (511)
T 3usb_A 271 AIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKVGIGPGS--ICTT----R-------VV 337 (511)
T ss_dssp EEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCST--TCCH----H-------HH
T ss_pred eEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHHHhCCCEEEECCCCcc--cccc----c-------cc
Confidence 9952 22111 2345556655445666655 689999999999999999998432221 1110 0 00
Q ss_pred cccChhHHHHhhhcc-CCcHHHHHHH---hhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 021575 192 RNMDDDEVFTFAKKI-AAPYDLVMQT---KQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 192 ~~~~~d~~~~~~~~~-~~~~~~i~~i---~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~ 259 (310)
.+. .+.+..+.++ .+..++||| |+|||+++.|+.+++.+|||+|++||+|+.+.
T Consensus 338 ------------~g~g~p~~~~l~~v~~~~~~~~iPVI--a~GGI~~~~di~kala~GA~~V~vGs~~~~~~ 395 (511)
T 3usb_A 338 ------------AGVGVPQLTAVYDCATEARKHGIPVI--ADGGIKYSGDMVKALAAGAHVVMLGSMFAGVA 395 (511)
T ss_dssp ------------HCCCCCHHHHHHHHHHHHHTTTCCEE--EESCCCSHHHHHHHHHTTCSEEEESTTTTTBT
T ss_pred ------------cCCCCCcHHHHHHHHHHHHhCCCcEE--EeCCCCCHHHHHHHHHhCchhheecHHHhcCc
Confidence 012 3335555444 333579998 88999999999999999999999999997754
No 109
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=98.97 E-value=6.9e-09 Score=97.03 Aligned_cols=150 Identities=19% Similarity=0.238 Sum_probs=99.0
Q ss_pred HHHHHHHHcCCcEEEecc------------CC-cccccccCCCCCCC----CHHHHHHHHhhcCcceeeccccCcHHHHH
Q 021575 46 EQARVAEEAGACAVMALE------------RV-PADIRSQGGVARMS----DPQLIKEIKQSVTIPVMAKARIGHFVEAQ 108 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~------------~~-~~~~~~~~G~~~~~----~~~~i~~i~~~~~iPv~vk~~~~~~~~a~ 108 (310)
+.|+.+.++|+|+| +|+ |. +...+.+||+- .. ..+.++.++++++.||.++.....+..
T Consensus 148 ~aA~~a~~aGfDgV-Eih~a~GyLl~qFlsp~~N~R~D~yGGsl-enR~r~~~eiv~avr~~v~~pv~vRls~~~~~~-- 223 (340)
T 3gr7_A 148 NGARRAKEAGFDVI-EIHAAHGYLINEFLSPLSNRRQDEYGGSP-ENRYRFLGEVIDAVREVWDGPLFVRISASDYHP-- 223 (340)
T ss_dssp HHHHHHHHHTCSEE-EEEECTTCHHHHHHCTTTCCCCSTTSSSH-HHHHHHHHHHHHHHHHHCCSCEEEEEESCCCST--
T ss_pred HHHHHHHHcCCCEE-EEccccchHHHHcCCCccCcCCCcccCCH-HHHHHHHHHHHHHHHHhcCCceEEEeccccccC--
Confidence 36788889999997 665 21 33445556662 21 135677778888999999877542100
Q ss_pred HHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccce
Q 021575 109 ILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDI 188 (310)
Q Consensus 109 ~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~ 188 (310)
...+..+.. +-++.+.+.|+|+|.++.....+.
T Consensus 224 -------------~g~~~~~~~-------------------~la~~L~~~Gvd~i~vs~g~~~~~--------------- 256 (340)
T 3gr7_A 224 -------------DGLTAKDYV-------------------PYAKRMKEQGVDLVDVSSGAIVPA--------------- 256 (340)
T ss_dssp -------------TSCCGGGHH-------------------HHHHHHHHTTCCEEEEECCCSSCC---------------
T ss_pred -------------CCCCHHHHH-------------------HHHHHHHHcCCCEEEEecCCccCC---------------
Confidence 011122222 224456678999998874321110
Q ss_pred EeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHH
Q 021575 189 RVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 189 ~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~~a~dp~ 262 (310)
..+ . .....+++++++++..++||+ +.|||.+++++.++++.| ||.|++||+++. ||.
T Consensus 257 -~~~--~---------~~~~~~~~~~~ik~~~~iPVi--~~GgI~s~e~a~~~L~~G~aD~V~iGR~~la--nPd 315 (340)
T 3gr7_A 257 -RMN--V---------YPGYQVPFAELIRREADIPTG--AVGLITSGWQAEEILQNGRADLVFLGRELLR--NPY 315 (340)
T ss_dssp -CCC--C---------CTTTTHHHHHHHHHHTTCCEE--EESSCCCHHHHHHHHHTTSCSEEEECHHHHH--CTT
T ss_pred -CCC--C---------CccccHHHHHHHHHHcCCcEE--eeCCCCCHHHHHHHHHCCCeeEEEecHHHHh--Cch
Confidence 000 0 112346788888888899998 689999999999999998 999999999998 665
No 110
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.93 E-value=1.1e-08 Score=100.63 Aligned_cols=133 Identities=16% Similarity=0.160 Sum_probs=91.7
Q ss_pred HHHHHHHHHcCCCEEEe--CCCCC--chhHHHHHHhcCCCCcEEE-ecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHH
Q 021575 104 FVEAQILEAIGIDYVDE--SEVLT--PADEENHINKHNFRIPFVC-GCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAV 178 (310)
Q Consensus 104 ~~~a~~~~~aGad~Vi~--~~~~~--~~~~~~~i~~~~~~i~~~v-~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~ 178 (310)
.+.++.+.++|+|.|.. +.... ..+..+.+++..+++++++ ++.+.++++++.++|+|+|.+....+ +. +..
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I~vg~~~G-~~-~~t- 333 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCG-SI-CIT- 333 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCS-CC-BTT-
T ss_pred HHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEecccchHHHHHHHHHcCCCEEEECCCCC-cc-ccc-
Confidence 46778899999999963 33222 2355666655434777776 68999999999999999998832111 11 000
Q ss_pred HHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 021575 179 RHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 179 ~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a 258 (310)
+....... .....+..+.++++..++||+ ++|||+++.|+.+++.+|||+|++|++|+.+
T Consensus 334 ----------~~~~~~g~--------~~~~~~~~~~~~~~~~~ipVi--a~GGI~~~~di~kala~GAd~V~iG~~~l~~ 393 (514)
T 1jcn_A 334 ----------QEVMACGR--------PQGTAVYKVAEYARRFGVPII--ADGGIQTVGHVVKALALGASTVMMGSLLAAT 393 (514)
T ss_dssp ----------BCCCSCCC--------CHHHHHHHHHHHHGGGTCCEE--EESCCCSHHHHHHHHHTTCSEEEESTTTTTS
T ss_pred ----------ccccCCCc--------cchhHHHHHHHHHhhCCCCEE--EECCCCCHHHHHHHHHcCCCeeeECHHHHcC
Confidence 00000000 011235667777776789998 7899999999999999999999999999985
Q ss_pred C
Q 021575 259 G 259 (310)
Q Consensus 259 ~ 259 (310)
+
T Consensus 394 ~ 394 (514)
T 1jcn_A 394 T 394 (514)
T ss_dssp T
T ss_pred C
Confidence 4
No 111
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=98.91 E-value=2.8e-08 Score=92.81 Aligned_cols=150 Identities=20% Similarity=0.256 Sum_probs=97.2
Q ss_pred HHHHHHHHcCCcEEEecc------------CC-cccccccCCCCCCC----CHHHHHHHHhhcCcceeeccccCcHHHHH
Q 021575 46 EQARVAEEAGACAVMALE------------RV-PADIRSQGGVARMS----DPQLIKEIKQSVTIPVMAKARIGHFVEAQ 108 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~------------~~-~~~~~~~~G~~~~~----~~~~i~~i~~~~~iPv~vk~~~~~~~~a~ 108 (310)
+.|+.+.++|+|+| +|+ |. +...+.++|+ ... ..+.++.++++++.||.++.....+.
T Consensus 148 ~aA~~a~~aGfDgV-eih~~~gyLl~qFlsp~~n~R~d~yGGs-lenr~r~~~eiv~avr~~v~~pv~vris~~~~~--- 222 (338)
T 1z41_A 148 QAAARAKEAGFDVI-EIHAAHGYLIHEFLSPLSNHRTDEYGGS-PENRYRFLREIIDEVKQVWDGPLFVRVSASDYT--- 222 (338)
T ss_dssp HHHHHHHHTTCSEE-EEEECTTSHHHHHHCTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCS---
T ss_pred HHHHHHHHcCCCEE-EeccccchHHHHccCCCcCCcCcccCcc-hhhhHHHHHHHHHHHHHHcCCcEEEEecCcccC---
Confidence 45778889999997 665 11 2233445555 211 13567777888899999997654210
Q ss_pred HHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccce
Q 021575 109 ILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDI 188 (310)
Q Consensus 109 ~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~ 188 (310)
....+..+.. +-++++.+.|+|+|.++++.....
T Consensus 223 ------------~~g~~~~~~~-------------------~~a~~l~~~Gvd~i~v~~~~~~~~--------------- 256 (338)
T 1z41_A 223 ------------DKGLDIADHI-------------------GFAKWMKEQGVDLIDCSSGALVHA--------------- 256 (338)
T ss_dssp ------------TTSCCHHHHH-------------------HHHHHHHHTTCCEEEEECCCSSCC---------------
T ss_pred ------------CCCCCHHHHH-------------------HHHHHHHHcCCCEEEEecCccccC---------------
Confidence 0011111111 224456678999998876532110
Q ss_pred EeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHH
Q 021575 189 RVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 189 ~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~~a~dp~ 262 (310)
..+ . .....+++++++++..++||+ +.|||.+++++.++++.| ||.|++||+++. ||.
T Consensus 257 -~~~--~---------~~~~~~~~~~~ir~~~~iPVi--~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~--nPd 315 (338)
T 1z41_A 257 -DIN--V---------FPGYQVSFAEKIREQADMATG--AVGMITDGSMAEEILQNGRADLIFIGRELLR--DPF 315 (338)
T ss_dssp -CCC--C---------CTTTTHHHHHHHHHHHCCEEE--ECSSCCSHHHHHHHHHTTSCSEEEECHHHHH--CTT
T ss_pred -CCC--C---------CccchHHHHHHHHHHCCCCEE--EECCCCCHHHHHHHHHcCCceEEeecHHHHh--Cch
Confidence 000 0 011236778888887789998 789999999999999998 999999999998 564
No 112
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.90 E-value=2.7e-08 Score=89.74 Aligned_cols=66 Identities=24% Similarity=0.300 Sum_probs=50.0
Q ss_pred HHHHHhhcCCC-CEEEeCCCCCC--CHHHHHHHH----HcCCCEEEEccccccCCCHHHHHHHHHHHHhccCChh
Q 021575 212 LVMQTKQLGRL-PVVHFAAGGVA--TPADAAMMM----QLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHYSDPE 279 (310)
Q Consensus 212 ~i~~i~~~~~i-PVi~iA~GGI~--t~~d~~~~l----~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~~~~~ 279 (310)
.++++++..++ ||+ ++|||+ +.+++.+.+ ++||+|+.+|++|++++||...++++.+.+++...++
T Consensus 186 ~~~~~~~~~~~~pV~--asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~~dp~~~~~~l~~~v~~~~~~~ 258 (263)
T 1w8s_A 186 TFSWAVKVAGKVPVL--MSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQRRDALKFARALAELVYGGKKLA 258 (263)
T ss_dssp HHHHHHHHTTTSCEE--EECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTSTTHHHHHHHHHHHHC------
T ss_pred HHHHHHHhCCCCeEE--EEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCCcCHHHHHHHHHHHHhcCCCHH
Confidence 34555544455 988 679999 788776666 8999999999999999999999999999998766544
No 113
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=98.90 E-value=8.3e-09 Score=90.87 Aligned_cols=60 Identities=27% Similarity=0.294 Sum_probs=50.8
Q ss_pred cHHHHHHHhhcC-CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhc
Q 021575 209 PYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTH 274 (310)
Q Consensus 209 ~~~~i~~i~~~~-~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~ 274 (310)
+.++++++++.. ++|++ .+|||+|++++.+++ .|||+|+|||++.+ ||. .++++.+++++
T Consensus 167 ~~~~i~~i~~~~~~~Pv~--vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~--~p~-~~~~~v~a~~~ 227 (228)
T 3vzx_A 167 DIEAVKKTKAVLETSTLF--YGGGIKDAETAKQYA-EHADVIVVGNAVYE--DFD-RALKTVAAVKG 227 (228)
T ss_dssp CHHHHHHHHHHCSSSEEE--EESSCCSHHHHHHHH-TTCSEEEECTHHHH--CHH-HHHHHHHHHHC
T ss_pred CHHHHHHHHHhcCCCCEE--EeCCCCCHHHHHHHH-hCCCEEEEChHHhc--CHH-HHHHHHHHHhc
Confidence 578899998887 79998 689999999999988 79999999999998 664 55667777653
No 114
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=98.88 E-value=4.2e-09 Score=99.95 Aligned_cols=87 Identities=22% Similarity=0.314 Sum_probs=65.3
Q ss_pred CCcEEE-ecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHh
Q 021575 139 RIPFVC-GCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTK 217 (310)
Q Consensus 139 ~i~~~v-~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~ 217 (310)
++++++ .+.+.++++++.++|+|.|.+.+.+++.. | ...++++.+.+++
T Consensus 225 ~~Pv~vkgv~t~e~a~~a~~aGad~I~vs~~gg~~~-----------------------d-------~~~~~~~~l~~v~ 274 (380)
T 1p4c_A 225 PHKLLVKGLLSAEDADRCIAEGADGVILSNHGGRQL-----------------------D-------CAISPMEVLAQSV 274 (380)
T ss_dssp CSEEEEEEECCHHHHHHHHHTTCSEEEECCGGGTSC-----------------------T-------TCCCGGGTHHHHH
T ss_pred CCCEEEEecCcHHHHHHHHHcCCCEEEEcCCCCCcC-----------------------C-------CCcCHHHHHHHHH
Confidence 445443 46778888888899999988854432110 0 1133466677777
Q ss_pred hcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 021575 218 QLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 218 ~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~ 257 (310)
+..++||+ ++|||++++|+.+++.+|||+|++|++++.
T Consensus 275 ~~~~~pVi--a~GGI~~~~dv~kal~~GAdaV~iGr~~l~ 312 (380)
T 1p4c_A 275 AKTGKPVL--IDSGFRRGSDIVKALALGAEAVLLGRATLY 312 (380)
T ss_dssp HHHCSCEE--ECSSCCSHHHHHHHHHTTCSCEEESHHHHH
T ss_pred HHcCCeEE--EECCCCCHHHHHHHHHhCCcHhhehHHHHH
Confidence 76677998 899999999999999999999999999986
No 115
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=98.86 E-value=5.6e-09 Score=97.30 Aligned_cols=51 Identities=22% Similarity=0.303 Sum_probs=43.1
Q ss_pred HHHHHHHhhcC--CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHH
Q 021575 210 YDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVK 263 (310)
Q Consensus 210 ~~~i~~i~~~~--~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~ 263 (310)
++.++++++.+ ++||+ ++|||+|++|+.+++++|||+|++||+++. +||+.
T Consensus 276 ~~~i~~i~~~~~~~ipVi--~~GGI~~~~da~~~l~~GAd~V~igr~~l~-~~P~~ 328 (336)
T 1f76_A 276 TEIIRRLSLELNGRLPII--GVGGIDSVIAAREKIAAGASLVQIYSGFIF-KGPPL 328 (336)
T ss_dssp HHHHHHHHHHHTTSSCEE--EESSCCSHHHHHHHHHHTCSEEEESHHHHH-HCHHH
T ss_pred HHHHHHHHHHhCCCCCEE--EECCCCCHHHHHHHHHCCCCEEEeeHHHHh-cCcHH
Confidence 45677777665 79998 789999999999999999999999999874 36863
No 116
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=98.85 E-value=2.2e-08 Score=111.14 Aligned_cols=210 Identities=12% Similarity=0.135 Sum_probs=138.4
Q ss_pred eec-cCcceeecchhhhhhCcccccCCCHHHHHHHHHcCCcEEE-ecc-CCcccccccCCCCCCCCHHHHHHHHhhcC--
Q 021575 18 ETK-KSPFSVKVGLAQMLRGGVIMDVVTPEQARVAEEAGACAVM-ALE-RVPADIRSQGGVARMSDPQLIKEIKQSVT-- 92 (310)
Q Consensus 18 ~~~-~~~~~~~~~~~~~~~~g~i~~~~~~~~A~~~~~~Ga~~i~-~L~-~~~~~~~~~~G~~~~~~~~~i~~i~~~~~-- 92 (310)
+++ -..|+ ++|+++ +|+..+.+++++|.++.++|.-+++ ... +.+.. ..+.|+++++.++
T Consensus 580 ~t~~t~llg-~~PIi~---~gM~~~~~~~~lvaAvsnAGglg~l~~~~~~~~e~-----------l~~~I~~~~~~t~~~ 644 (2051)
T 2uv8_G 580 ETKFSKLIG-RPPLLV---PGMTPCTVSPDFVAATTNAGYTIELAGGGYFSAAG-----------MTAAIDSVVSQIEKG 644 (2051)
T ss_dssp ECHHHHHHS-SCSEEE---CCCHHHHTCHHHHHHHHHTTCEEEEEGGGCCSHHH-----------HHHHHHHHHHHSCTT
T ss_pred HHHHHHhhC-ccceec---CCCccccccHHHHHHHHcCCcEEEEccCCCCCHHH-----------HHHHHHHHHHhcCCC
Confidence 344 34567 589999 6765577799999999999988763 111 11110 1246666676654
Q ss_pred cceeeccccC-c------HHHHHHHHHcCCCE--EEeCCCC-CchhHHHHHHhcCCCCcEEEec----CCHHHHHHHHHh
Q 021575 93 IPVMAKARIG-H------FVEAQILEAIGIDY--VDESEVL-TPADEENHINKHNFRIPFVCGC----RNLGEALRRIRE 158 (310)
Q Consensus 93 iPv~vk~~~~-~------~~~a~~~~~aGad~--Vi~~~~~-~~~~~~~~i~~~~~~i~~~v~~----~t~~ea~~~~~~ 158 (310)
.|+.++..+. . .+.++.+.+.|+.. |...... ...+..+++... ++.++.-+ .....+.++.++
T Consensus 645 ~~~gvN~~~~~~~~~~~~~~~~~~~~~~gv~i~~v~~~ag~p~~~~~~~~i~~l--G~~vi~~~~~~~~a~~~~~~~~~~ 722 (2051)
T 2uv8_G 645 STFGINLIYVNPFMLQWGIPLIKELRSKGYPIQFLTIGAGVPSLEVASEYIETL--GLKYLGLKPGSIDAISQVINIAKA 722 (2051)
T ss_dssp CCEEEEEETTCTTHHHHHHHHHHHHHHTTCSEEEEEEESSCCCHHHHHHHHHHS--CCSCEEECCCSHHHHHHHHHHHHH
T ss_pred CceEEEEeecChhhhhhhHHHHHHHHHcCCCcceEEecCCCCchhhHHHHHHHc--CCEEEEecCchHHHHHHHHHHHHh
Confidence 7888885432 1 25567888999998 7544443 345566677654 55554422 233455777788
Q ss_pred CCCEE---EEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhcc-CCcHHHHHHHhhcCCCCEEEeCCCCCCC
Q 021575 159 GAAMI---RTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKI-AAPYDLVMQTKQLGRLPVVHFAAGGVAT 234 (310)
Q Consensus 159 Gad~V---~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~-~~~~~~i~~i~~~~~iPVi~iA~GGI~t 234 (310)
|+|++ .+.|...+||.. .. +. ...+.++.++++..++||| |+|||.+
T Consensus 723 g~d~~ii~~~~G~eaGGH~g------------------~~---------d~~~~~l~l~~~v~~~~~ipvi--aaGGi~d 773 (2051)
T 2uv8_G 723 HPNFPIALQWTGGRGGGHHS------------------FE---------DAHTPMLQMYSKIRRHPNIMLI--FGSGFGS 773 (2051)
T ss_dssp STTSCEEEEECCSSCSEECC------------------SC---------CSSHHHHHHHHHHTTCTTBCCE--EESSCCS
T ss_pred CCCceeEEEEEccCcCCCCC------------------cc---------cccccHHHHHHHHHhcCCceEE--EeCCCCC
Confidence 99983 445655555521 00 01 1235678899998999998 8899999
Q ss_pred HHHHHHHH-----------HcCCCEEEEccccccCCCHHHHHHHHHHHHhc
Q 021575 235 PADAAMMM-----------QLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTH 274 (310)
Q Consensus 235 ~~d~~~~l-----------~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~ 274 (310)
++++..++ .+|||||.+||.|+-++.. .+..++++++-+
T Consensus 774 g~~~~aaL~g~w~~~~g~~~lgadGv~~GTrf~~t~Ea-~~~~~~K~~iv~ 823 (2051)
T 2uv8_G 774 ADDTYPYLTGEWSTKFDYPPMPFDGFLFGSRVMIAKEV-KTSPDAKKCIAA 823 (2051)
T ss_dssp HHHHTHHHHTCGGGTTTCCCCCCSCEECSGGGTTSTTS-CCCHHHHHHHHT
T ss_pred HHHHHHHHccccccccCccCCCCceeeechHHHhCccc-ccCHHHHHHHHh
Confidence 99999999 8999999999999987643 233445555544
No 117
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=98.84 E-value=3.6e-08 Score=90.15 Aligned_cols=150 Identities=19% Similarity=0.164 Sum_probs=99.0
Q ss_pred cCcceeeccccC-----------cHHHHHHHHHcCCCEEE--eCCC-CC----chhHHHHHHh-cCCCCcEEEec-----
Q 021575 91 VTIPVMAKARIG-----------HFVEAQILEAIGIDYVD--ESEV-LT----PADEENHINK-HNFRIPFVCGC----- 146 (310)
Q Consensus 91 ~~iPv~vk~~~~-----------~~~~a~~~~~aGad~Vi--~~~~-~~----~~~~~~~i~~-~~~~i~~~v~~----- 146 (310)
.++|++++..-+ ....++.+.+.|||.|. +... .. ..++.+..+. +..++++++..
T Consensus 104 ~~~~lil~l~~~t~~~~~~~~~~l~~~ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIie~~~G~~ 183 (295)
T 3glc_A 104 TNRPVVLRASGANSILAELSNEAVALSMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKD 183 (295)
T ss_dssp GCCCEEEECEECCCTTSCTTCCEECSCHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEEEECC---
T ss_pred CCccEEEEEcCCCcCCCCCccchhHHHHHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEEECCCCCc
Confidence 378888864221 01357889999999994 2211 11 2223333333 34567777632
Q ss_pred --CCHH----HHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcC
Q 021575 147 --RNLG----EALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG 220 (310)
Q Consensus 147 --~t~~----ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~ 220 (310)
.+.+ .++.+.++|+|+|++. + ++. .++++.+..
T Consensus 184 ~~~d~e~i~~aariA~elGAD~VKt~-~--t~e--------------------------------------~~~~vv~~~ 222 (295)
T 3glc_A 184 MVRDQRYFSLATRIAAEMGAQIIKTY-Y--VEK--------------------------------------GFERIVAGC 222 (295)
T ss_dssp -CCSHHHHHHHHHHHHHTTCSEEEEE-C--CTT--------------------------------------THHHHHHTC
T ss_pred cCCCHHHHHHHHHHHHHhCCCEEEeC-C--CHH--------------------------------------HHHHHHHhC
Confidence 1222 3444668899999975 2 111 123455456
Q ss_pred CCCEEEeCCCCCCCH-----HHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhccCChhhhhh
Q 021575 221 RLPVVHFAAGGVATP-----ADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHYSDPEVLAE 283 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~-----~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~~~~~~~~~ 283 (310)
++||+ ++||++.. +.+..++++||+|+++||.|++++||..+++.+...+++....+...+
T Consensus 223 ~vPVv--~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~dp~~~~~al~~ivh~~~s~~eA~~ 288 (295)
T 3glc_A 223 PVPIV--IAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDHPVAMMKAVQAVVHHNETADRAYE 288 (295)
T ss_dssp SSCEE--EECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHHHCCCHHHHHH
T ss_pred CCcEE--EEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCcCHHHHHHHHHHHHhCCCCHHHHHH
Confidence 78998 67999743 356677789999999999999999999999999999998887665443
No 118
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=98.84 E-value=2e-08 Score=88.37 Aligned_cols=191 Identities=13% Similarity=0.099 Sum_probs=115.4
Q ss_pred ccCCCHHHHHHH-HHcC--CcEEEecc-CCcccccccCCCCCCCCHHHHHHHHhhc-CcceeeccccC--cHHHHHHHHH
Q 021575 40 MDVVTPEQARVA-EEAG--ACAVMALE-RVPADIRSQGGVARMSDPQLIKEIKQSV-TIPVMAKARIG--HFVEAQILEA 112 (310)
Q Consensus 40 ~~~~~~~~A~~~-~~~G--a~~i~~L~-~~~~~~~~~~G~~~~~~~~~i~~i~~~~-~iPv~vk~~~~--~~~~a~~~~~ 112 (310)
.|+.+.+.+..+ .+.| ++++ .+. +. ...+| ++.++++++.+ +.++.+...+. ....++.+.+
T Consensus 12 lD~~~~~~a~~~~~~~~~~~~~i-kvg~~l---f~~~G-------~~~v~~l~~~~p~~~iflDlKl~Dip~t~~~~~~~ 80 (221)
T 3exr_A 12 LDHSNLKGAITAAVSVGNEVDVI-EAGTVC---LLQVG-------SELVEVLRSLFPDKIIVADTKCADAGGTVAKNNAV 80 (221)
T ss_dssp ECCSSHHHHHHHHHHHGGGCSEE-EECHHH---HHHHC-------THHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHT
T ss_pred eCCCCHHHHHHHHHhhCCCceEE-EECHHH---HHhcC-------HHHHHHHHHhCCCCcEEEEEEeeccHHHHHHHHHH
Confidence 355666555544 4444 6665 331 11 12233 67889998765 66666643332 2234566888
Q ss_pred cCCCEEEeCCCCC---chhHHHHHHhcC-CCCcEEEecCC---HHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhc
Q 021575 113 IGIDYVDESEVLT---PADEENHINKHN-FRIPFVCGCRN---LGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVM 185 (310)
Q Consensus 113 aGad~Vi~~~~~~---~~~~~~~i~~~~-~~i~~~v~~~t---~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~ 185 (310)
+|+|.+..+.... .....+.+++.+ ....+.+++.+ .+++....+.|++.+.++-.....
T Consensus 81 ~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~~~~Vt~lts~~~~~~~~~~~~~~~~~v~~~a~~~~------------- 147 (221)
T 3exr_A 81 RGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGDWTYDQAQQWLDAGISQAIYHQSRDAL------------- 147 (221)
T ss_dssp TTCSEEEEETTSCHHHHHHHHHHHHHHCTTTCEEEEECCSSCCHHHHHHHHHTTCCEEEEECCHHHH-------------
T ss_pred cCCCEEEEeccCCHHHHHHHHHHHHhcCCCcceEEEEEcCCCCHHHHHHHHcCCHHHHHHHHHHhcC-------------
Confidence 9999985332222 334455555443 22556666543 566666667799887775321000
Q ss_pred cceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHH
Q 021575 186 GDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVK 263 (310)
Q Consensus 186 ~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~ 263 (310)
.+ +...+...++.+++. .++++. ..||| +++++..+..+|||.+++||+|++++||..
T Consensus 148 ----------~~-------Gvv~s~~e~~~ir~~~~~~~~i~--v~gGI-~~~~~~~~~~aGad~~VvG~~I~~a~dp~~ 207 (221)
T 3exr_A 148 ----------LA-------GETWGEKDLNKVKKLIEMGFRVS--VTGGL-SVDTLKLFEGVDVFTFIAGRGITEAKNPAG 207 (221)
T ss_dssp ----------HH-------TCCCCHHHHHHHHHHHHHTCEEE--EESSC-CGGGGGGGTTCCCSEEEECHHHHTSSSHHH
T ss_pred ----------CC-------ccccCHHHHHHHHHhhcCCceEE--EECCC-CHHHHHHHHHCCCCEEEECchhhCCCCHHH
Confidence 00 111122223344332 256666 46999 699999989999999999999999999999
Q ss_pred HHHHHHHHHhc
Q 021575 264 RAQAIVRAVTH 274 (310)
Q Consensus 264 ~a~~l~~~i~~ 274 (310)
.++++++.+++
T Consensus 208 a~~~~~~~~~~ 218 (221)
T 3exr_A 208 AARAFKDEIKR 218 (221)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99988887754
No 119
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=98.82 E-value=4.6e-08 Score=91.74 Aligned_cols=152 Identities=20% Similarity=0.238 Sum_probs=96.1
Q ss_pred HHHHHHHHcCCcEEEecc------------CC-cccccccCCCCC--CC-CHHHHHHHHhhc--CcceeeccccCcHHHH
Q 021575 46 EQARVAEEAGACAVMALE------------RV-PADIRSQGGVAR--MS-DPQLIKEIKQSV--TIPVMAKARIGHFVEA 107 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~------------~~-~~~~~~~~G~~~--~~-~~~~i~~i~~~~--~iPv~vk~~~~~~~~a 107 (310)
+.|+.+.++|+|+| +|+ |. +...+.+||+-. .+ ..+.++.+++++ +.||.++.....+.
T Consensus 156 ~aA~~a~~aGfDgV-Eih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~-- 232 (349)
T 3hgj_A 156 EGARRALRAGFQVI-ELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWG-- 232 (349)
T ss_dssp HHHHHHHHTTCCEE-EEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCS--
T ss_pred HHHHHHHHcCCCEE-EECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEecccccc--
Confidence 36788899999997 665 21 233445566521 11 135677778887 78999887643110
Q ss_pred HHHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccc
Q 021575 108 QILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGD 187 (310)
Q Consensus 108 ~~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~ 187 (310)
....+..+.. +-++.+.+.|+|+|.++........
T Consensus 233 -------------~~g~~~~~~~-------------------~la~~L~~~Gvd~i~vs~g~~~~~~------------- 267 (349)
T 3hgj_A 233 -------------EGGWSLEDTL-------------------AFARRLKELGVDLLDCSSGGVVLRV------------- 267 (349)
T ss_dssp -------------TTSCCHHHHH-------------------HHHHHHHHTTCCEEEEECCCSCSSS-------------
T ss_pred -------------CCCCCHHHHH-------------------HHHHHHHHcCCCEEEEecCCcCccc-------------
Confidence 0011111211 2245566789999988742211100
Q ss_pred eEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHH
Q 021575 188 IRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 188 ~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~~a~dp~ 262 (310)
..+ . .....+++++.+++..++||+ +.|||.+++++.++++.| ||.|++||+++. ||.
T Consensus 268 --~~~--~---------~~~~~~~~~~~ir~~~~iPVi--~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~la--nPd 326 (349)
T 3hgj_A 268 --RIP--L---------APGFQVPFADAVRKRVGLRTG--AVGLITTPEQAETLLQAGSADLVLLGRVLLR--DPY 326 (349)
T ss_dssp --CCC--C---------CTTTTHHHHHHHHHHHCCEEE--ECSSCCCHHHHHHHHHTTSCSEEEESTHHHH--CTT
T ss_pred --ccC--C---------CccccHHHHHHHHHHcCceEE--EECCCCCHHHHHHHHHCCCceEEEecHHHHh--Cch
Confidence 000 0 112346778888887789998 789999999999999998 999999999998 554
No 120
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=98.82 E-value=4e-08 Score=86.74 Aligned_cols=50 Identities=20% Similarity=0.261 Sum_probs=44.4
Q ss_pred CcHHHHHHHhhcC-CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHH
Q 021575 208 APYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 208 ~~~~~i~~i~~~~-~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~ 262 (310)
.+.++++++++.. ++|++ .+|||++++++.++.+ |||+|+|||+|++ ||.
T Consensus 172 g~~~~v~~ir~~~~~~pv~--vGfGI~~~e~a~~~~~-gAD~VVVGSai~~--~~~ 222 (235)
T 3w01_A 172 GDVSKVQAVSEHLTETQLF--YGGGISSEQQATEMAA-IADTIIVGDIIYK--DIK 222 (235)
T ss_dssp CCHHHHHHHHTTCSSSEEE--EESCCCSHHHHHHHHT-TSSEEEECTHHHH--CHH
T ss_pred CCHHHHHHHHHhcCCCCEE--EECCcCCHHHHHHHHc-CCCEEEECCceec--CHH
Confidence 3578899999887 89998 6899999999999877 9999999999998 765
No 121
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.80 E-value=5.7e-08 Score=95.08 Aligned_cols=128 Identities=18% Similarity=0.228 Sum_probs=87.0
Q ss_pred HHHHHHHHHcCCCEEEe--CCCCC--chhHHHHHHhcCCCCcEEE-ecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHH
Q 021575 104 FVEAQILEAIGIDYVDE--SEVLT--PADEENHINKHNFRIPFVC-GCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAV 178 (310)
Q Consensus 104 ~~~a~~~~~aGad~Vi~--~~~~~--~~~~~~~i~~~~~~i~~~v-~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~ 178 (310)
.+.++.+.++|+|.+.. ..... ..+..+.+++..+++++++ .+.+.++++++.+.|+|+|.+.+..++.. ..
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d~I~v~~~~G~~~--~~- 315 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKVGVGPGSIC--TT- 315 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTC--HH-
T ss_pred HHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcCCCEEEEcCCCCccc--cc-
Confidence 46778899999999963 22222 3345555555433666654 48899999999999999999854433211 00
Q ss_pred HHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhh---cCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcccc
Q 021575 179 RHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQ---LGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGV 255 (310)
Q Consensus 179 ~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~---~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai 255 (310)
+. +.. -..+....+..+.+ ..++||+ ++|||+++.|+.+++.+|||+|++|+++
T Consensus 316 ---~~-------~~~-----------~g~p~~~~l~~v~~~~~~~~ipvi--a~GGI~~~~di~kala~GAd~V~iGr~~ 372 (494)
T 1vrd_A 316 ---RV-------VAG-----------VGVPQLTAVMECSEVARKYDVPII--ADGGIRYSGDIVKALAAGAESVMVGSIF 372 (494)
T ss_dssp ---HH-------HHC-----------CCCCHHHHHHHHHHHHHTTTCCEE--EESCCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred ---cc-------cCC-----------CCccHHHHHHHHHHHHhhcCCCEE--EECCcCCHHHHHHHHHcCCCEEEECHHH
Confidence 00 000 01233444444433 2589998 7899999999999999999999999999
Q ss_pred cc
Q 021575 256 FK 257 (310)
Q Consensus 256 ~~ 257 (310)
+.
T Consensus 373 l~ 374 (494)
T 1vrd_A 373 AG 374 (494)
T ss_dssp HT
T ss_pred hc
Confidence 74
No 122
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=98.75 E-value=1.1e-07 Score=89.73 Aligned_cols=147 Identities=13% Similarity=0.080 Sum_probs=93.6
Q ss_pred HHHHHHHHcCCcEEEecc------------CC-cccccccCCCCC--CC-CHHHHHHHHhhcCc-ceeeccccC-cHHHH
Q 021575 46 EQARVAEEAGACAVMALE------------RV-PADIRSQGGVAR--MS-DPQLIKEIKQSVTI-PVMAKARIG-HFVEA 107 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~------------~~-~~~~~~~~G~~~--~~-~~~~i~~i~~~~~i-Pv~vk~~~~-~~~~a 107 (310)
+.|+.+.++|+|+| +|+ |. +.....++|+.. .+ ..+.++.+++.++- ||.+|.... ++.
T Consensus 165 ~aA~~a~~aGfDgV-eih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~-- 241 (365)
T 2gou_A 165 QAALNAMEAGFDGI-ELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLN-- 241 (365)
T ss_dssp HHHHHHHHTTCSEE-EEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTT--
T ss_pred HHHHHHHHcCCCEE-EEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccC--
Confidence 45777889999997 665 11 223344555521 11 12557777877642 999987653 110
Q ss_pred HHHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccc
Q 021575 108 QILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGD 187 (310)
Q Consensus 108 ~~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~ 187 (310)
|. .+..+..+.. +-++.+.+.|+|+|.++++...+.
T Consensus 242 ------~~-----~~~~~~~~~~-------------------~~a~~l~~~G~d~i~v~~~~~~~~-------------- 277 (365)
T 2gou_A 242 ------GT-----VDADPILTYT-------------------AAAALLNKHRIVYLHIAEVDWDDA-------------- 277 (365)
T ss_dssp ------SC-----CCSSHHHHHH-------------------HHHHHHHHTTCSEEEEECCBTTBC--------------
T ss_pred ------CC-----CCCCCHHHHH-------------------HHHHHHHHcCCCEEEEeCCCcCCC--------------
Confidence 00 0000011111 125556678999999886532110
Q ss_pred eEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHH
Q 021575 188 IRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 188 ~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~~a~dp~ 262 (310)
...++++++.+++..++||+ +.||| +++++.++++.| ||+|++||+++. ||.
T Consensus 278 ------------------~~~~~~~~~~i~~~~~iPvi--~~Ggi-~~~~a~~~l~~g~aD~V~igR~~i~--~P~ 330 (365)
T 2gou_A 278 ------------------PDTPVSFKRALREAYQGVLI--YAGRY-NAEKAEQAINDGLADMIGFGRPFIA--NPD 330 (365)
T ss_dssp ------------------CCCCHHHHHHHHHHCCSEEE--EESSC-CHHHHHHHHHTTSCSEEECCHHHHH--CTT
T ss_pred ------------------CCccHHHHHHHHHHCCCcEE--EeCCC-CHHHHHHHHHCCCcceehhcHHHHh--Cch
Confidence 11245678888888899998 67999 899999999988 999999999998 565
No 123
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=98.72 E-value=5.2e-08 Score=85.12 Aligned_cols=158 Identities=15% Similarity=0.147 Sum_probs=95.8
Q ss_pred HHHHHHHHhhc-Ccceee--ccccCcHHHHHHHHHcCCCEEEeCCCCC---chhHHHHHHhcCCCCcEEE----ecCCHH
Q 021575 81 PQLIKEIKQSV-TIPVMA--KARIGHFVEAQILEAIGIDYVDESEVLT---PADEENHINKHNFRIPFVC----GCRNLG 150 (310)
Q Consensus 81 ~~~i~~i~~~~-~iPv~v--k~~~~~~~~a~~~~~aGad~Vi~~~~~~---~~~~~~~i~~~~~~i~~~v----~~~t~~ 150 (310)
++.++.+++.+ +.++.. |..-.....++.+.++|||.+..+.... ...+.+.+++ .+...++ ..+ ..
T Consensus 44 ~~~i~~l~~~~p~~~v~lD~kl~dip~t~~~~~~~~Gad~itvh~~~g~~~l~~~~~~~~~--~g~~~~~~ll~~~t-~~ 120 (216)
T 1q6o_A 44 VRAVRDLKALYPHKIVLADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDVAKE--FNGDVQIELTGYWT-WE 120 (216)
T ss_dssp THHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHH--TTCEEEEEECSCCC-HH
T ss_pred HHHHHHHHHhCCCCeEEEEEEecccHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHH--cCCCceeeeeeCCC-hh
Confidence 67888888874 344444 4331222345678889999996332222 2344444443 3444333 222 44
Q ss_pred HHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcC--CCCEEEeC
Q 021575 151 EALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG--RLPVVHFA 228 (310)
Q Consensus 151 ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~--~iPVi~iA 228 (310)
....+.+.|.+.+.++-... ++ ..+.....+.++.+++.. ++|++ +
T Consensus 121 ~~~~l~~~~~~~~vl~~a~~------~~------------------------~~G~~g~~~~i~~lr~~~~~~~~i~--v 168 (216)
T 1q6o_A 121 QAQQWRDAGIGQVVYHRSRD------AQ------------------------AAGVAWGEADITAIKRLSDMGFKVT--V 168 (216)
T ss_dssp HHHHHHHTTCCEEEEECCHH------HH------------------------HTTCCCCHHHHHHHHHHHHTTCEEE--E
T ss_pred hHHHHHhcCcHHHHHHHHHH------HH------------------------hcCCCCCHHHHHHHHHhcCCCCcEE--E
Confidence 55555566776665542100 00 001111123344444332 57787 4
Q ss_pred CCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhc
Q 021575 229 AGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTH 274 (310)
Q Consensus 229 ~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~ 274 (310)
.|||+ ++++.+++++|||++++||+|++++||...+++|.+.+++
T Consensus 169 ~GGI~-~~~~~~~~~aGad~ivvG~~I~~a~dp~~~~~~~~~~i~~ 213 (216)
T 1q6o_A 169 TGGLA-LEDLPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIAE 213 (216)
T ss_dssp ESSCC-GGGGGGGTTSCCSEEEESHHHHTSSCHHHHHHHHHHHHHH
T ss_pred ECCcC-hhhHHHHHHcCCCEEEEeehhcCCCCHHHHHHHHHHHHHh
Confidence 69995 9999999999999999999999999999999999887754
No 124
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=98.72 E-value=8.6e-08 Score=88.20 Aligned_cols=137 Identities=16% Similarity=0.157 Sum_probs=88.6
Q ss_pred HHHHHHHHcCCCEEE--e--CCCC-C---chhHHHHHHh-cCCCCcEEEec--------------CCHHH-HHHHHHhCC
Q 021575 105 VEAQILEAIGIDYVD--E--SEVL-T---PADEENHINK-HNFRIPFVCGC--------------RNLGE-ALRRIREGA 160 (310)
Q Consensus 105 ~~a~~~~~aGad~Vi--~--~~~~-~---~~~~~~~i~~-~~~~i~~~v~~--------------~t~~e-a~~~~~~Ga 160 (310)
..++.+.+.|||+|- . .... + ...+.+..+. +..++++++.+ ++..+ ++.+.++|+
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGa 191 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGA 191 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSC
T ss_pred hhHHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCC
Confidence 567889999999993 1 1211 1 1223333333 34677766654 11344 445567899
Q ss_pred CEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhh----cCCCC-EEEeCCCCCCCH
Q 021575 161 AMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQ----LGRLP-VVHFAAGGVATP 235 (310)
Q Consensus 161 d~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~----~~~iP-Vi~iA~GGI~t~ 235 (310)
|+++++.... + ..+++.+.++.+ .+.+| |+ .+||+ +.
T Consensus 192 D~iKv~~~~~-~----------------------------------~g~~~~~~~vv~~~~~~~~~P~Vv--~aGG~-~~ 233 (304)
T 1to3_A 192 DLYKVEMPLY-G----------------------------------KGARSDLLTASQRLNGHINMPWVI--LSSGV-DE 233 (304)
T ss_dssp SEEEECCGGG-G----------------------------------CSCHHHHHHHHHHHHHTCCSCEEE--CCTTS-CT
T ss_pred CEEEeCCCcC-C----------------------------------CCCHHHHHHHHHhccccCCCCeEE--EecCC-CH
Confidence 9999875311 0 001222222322 26789 77 68999 56
Q ss_pred ----HHHHHHHHcCCCEEEEccccccC----CCHHHHH--------HHHHHHHhccCChh
Q 021575 236 ----ADAAMMMQLGCDGVFVGSGVFKS----GDPVKRA--------QAIVRAVTHYSDPE 279 (310)
Q Consensus 236 ----~d~~~~l~~GadgV~VGsai~~a----~dp~~~a--------~~l~~~i~~~~~~~ 279 (310)
+.+..+++.|++|++|||+|+++ +||...+ ++|.+.+++...++
T Consensus 234 ~~~~~~~~~a~~aGa~Gv~vGRaI~q~~~~~~dp~~~~~~~~~~~~~~l~~iv~~~~~~~ 293 (304)
T 1to3_A 234 KLFPRAVRVAMEAGASGFLAGRAVWSSVIGLPDTELMLRDVSAPKLQRLGEIVDEMMGKR 293 (304)
T ss_dssp TTHHHHHHHHHHTTCCEEEESHHHHGGGTTCSCHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCeEEEEehHHhCccccCCCHHHHHHhhchHHHHHHHHHHhcCCChh
Confidence 45888889999999999999999 9999999 88888887654433
No 125
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=98.70 E-value=1.4e-07 Score=88.88 Aligned_cols=148 Identities=16% Similarity=0.122 Sum_probs=94.1
Q ss_pred HHHHHHHHcCCcEEEecc------------CC-cccccccCCCCC--CC-CHHHHHHHHhhcC-cceeeccccCc-HHHH
Q 021575 46 EQARVAEEAGACAVMALE------------RV-PADIRSQGGVAR--MS-DPQLIKEIKQSVT-IPVMAKARIGH-FVEA 107 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~------------~~-~~~~~~~~G~~~--~~-~~~~i~~i~~~~~-iPv~vk~~~~~-~~~a 107 (310)
+.|+.+.++|+|+| +|+ |. ++..+.+||+.. .+ ..+.++.++++++ -||.+|..... +..
T Consensus 165 ~aA~~a~~aGfDgV-eih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~- 242 (364)
T 1vyr_A 165 QAVANAREAGFDLV-ELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQN- 242 (364)
T ss_dssp HHHHHHHHTTCSEE-EEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTT-
T ss_pred HHHHHHHHcCCCEE-EEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEcccccccc-
Confidence 46777889999997 664 11 233344556521 11 1345777788773 39999876541 100
Q ss_pred HHHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccc
Q 021575 108 QILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGD 187 (310)
Q Consensus 108 ~~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~ 187 (310)
.| ....+..+.. +-++++.+.|+|+|.++++...+.
T Consensus 243 -----~~------~~~~~~~~~~-------------------~~a~~l~~~G~d~i~v~~~~~~~~-------------- 278 (364)
T 1vyr_A 243 -----VD------NGPNEEADAL-------------------YLIEELAKRGIAYLHMSETDLAGG-------------- 278 (364)
T ss_dssp -----BC------CCTTHHHHHH-------------------HHHHHHHHTTCSEEEEECCBTTBC--------------
T ss_pred -----cc------CCCCCHHHHH-------------------HHHHHHHHhCCCEEEEecCcccCC--------------
Confidence 00 0000011111 125556788999999886432110
Q ss_pred eEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHH
Q 021575 188 IRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 188 ~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~~a~dp~ 262 (310)
...++++++.+++..++||+ +.||| +++++.++++.| ||+|++||+++. ||.
T Consensus 279 ------------------~~~~~~~~~~v~~~~~iPvi--~~Ggi-t~~~a~~~l~~g~aD~V~~gR~~l~--~P~ 331 (364)
T 1vyr_A 279 ------------------KPYSEAFRQKVRERFHGVII--GAGAY-TAEKAEDLIGKGLIDAVAFGRDYIA--NPD 331 (364)
T ss_dssp ------------------CCCCHHHHHHHHHHCCSEEE--EESSC-CHHHHHHHHHTTSCSEEEESHHHHH--CTT
T ss_pred ------------------CcccHHHHHHHHHHCCCCEE--EECCc-CHHHHHHHHHCCCccEEEECHHHHh--Chh
Confidence 11246678888888899998 67999 899999999988 999999999998 565
No 126
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.67 E-value=1.2e-06 Score=85.53 Aligned_cols=181 Identities=15% Similarity=0.159 Sum_probs=107.6
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHh-----hcCcceeecccc----CcHHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQ-----SVTIPVMAKARI----GHFVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~-----~~~iPv~vk~~~----~~~~~a~~~~~aGad 116 (310)
+.++.+.+.+...+..++.. ...-|. ....+.++.+.+ ....++.+...+ ...+.++.+.++|+|
T Consensus 174 ~a~~~m~~~~~~~lpVVd~~----g~lvGi--vt~~Dil~~~~~~~~~~d~~~~~~vg~~i~~~~~~~~~a~~l~~~G~d 247 (491)
T 1zfj_A 174 TAERILHEHRIEKLPLVDNS----GRLSGL--ITIKDIEKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERAEALFEAGAD 247 (491)
T ss_dssp HHHHHHHHTTCSEEEEECTT----SBEEEE--EEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEEEcCC----CcEEEE--EEHHHHHHHHhccccccCcCCcEEEEEeccCchhHHHHHHHHHHcCCC
Confidence 67778888988877444210 000111 112345555442 011122222111 235778899999999
Q ss_pred EEEeCCC-CCch---hHHHHHHhcCCCCcEEE-ecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEee
Q 021575 117 YVDESEV-LTPA---DEENHINKHNFRIPFVC-GCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVL 191 (310)
Q Consensus 117 ~Vi~~~~-~~~~---~~~~~i~~~~~~i~~~v-~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l 191 (310)
.++.... -... +..+.+++..++++++. .+.+.+.+.++.++|+|.|.+....+ .++.. + .+
T Consensus 248 ~ivi~~a~g~~~~~~~~i~~l~~~~p~~pvi~G~v~t~~~a~~~~~~Gad~I~vg~g~g--~~~~t----r-------~~ 314 (491)
T 1zfj_A 248 AIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVGIGPG--SICTT----R-------VV 314 (491)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHHCSSSCEEEEEECSHHHHHHHHHTTCSEEEECSSCC--TTBCH----H-------HH
T ss_pred eEEEeeecCcchhHHHHHHHHHHHCCCCcEeCCCccCHHHHHHHHHcCCCEEEECccCC--cceEE----e-------ee
Confidence 9963221 1222 33444444323666555 47889999999999999998852221 11100 0 00
Q ss_pred cccChhHHHHhhhccCCcHHHHHHHhh---cCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 021575 192 RNMDDDEVFTFAKKIAAPYDLVMQTKQ---LGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 192 ~~~~~d~~~~~~~~~~~~~~~i~~i~~---~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a 258 (310)
.. -..+..+.++++.. ..++||+ ++|||+++.|+.+++.+|||+|++|++|+.+
T Consensus 315 ~~-----------~~~p~~~~l~~~~~~~~~~~ipvi--a~GGi~~~~di~kal~~GA~~v~vG~~~~~~ 371 (491)
T 1zfj_A 315 AG-----------VGVPQVTAIYDAAAVAREYGKTII--ADGGIKYSGDIVKALAAGGNAVMLGSMFAGT 371 (491)
T ss_dssp TC-----------CCCCHHHHHHHHHHHHHHTTCEEE--EESCCCSHHHHHHHHHTTCSEEEESTTTTTB
T ss_pred cC-----------CCCCcHHHHHHHHHHHhhcCCCEE--eeCCCCCHHHHHHHHHcCCcceeeCHHhhCC
Confidence 00 01333555555543 3579998 8999999999999999999999999999863
No 127
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=98.67 E-value=1.8e-07 Score=81.26 Aligned_cols=179 Identities=17% Similarity=0.208 Sum_probs=101.2
Q ss_pred cCCCHH-HHHHHHHcCCcEE-EeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceee--ccc--cC-cHHHHHHHHHc
Q 021575 41 DVVTPE-QARVAEEAGACAV-MALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMA--KAR--IG-HFVEAQILEAI 113 (310)
Q Consensus 41 ~~~~~~-~A~~~~~~Ga~~i-~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~v--k~~--~~-~~~~a~~~~~a 113 (310)
+..+.+ ..+.+.+.|++++ +++. ..-...+| ++.++++++.++.++.. |.. .. ....++.+.++
T Consensus 7 D~~~l~~~~~~~~~~~~~~~~~kv~--~~~f~~~G-------~~~i~~lr~~~~~~v~~D~kl~DI~~t~~~~v~~~~~~ 77 (208)
T 2czd_A 7 DVYEGERAIKIAKSVKDYISMIKVN--WPLILGSG-------VDIIRRLKEETGVEIIADLKLADIPNTNRLIARKVFGA 77 (208)
T ss_dssp CCCSHHHHHHHHHHHGGGCSEEEEE--HHHHHHHC-------TTHHHHHHHHHCCEEEEEEEECSCHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHhcccccEEEec--HHHHHhhC-------HHHHHHHHHcCCCEEEEEeeeCchHHHHHHHHHHHHhc
Confidence 344554 3444566777654 2331 11112233 56888888774444444 432 22 13445778889
Q ss_pred CCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCCHH----------H-HHHHHHhCCCEEEEcCCCCCcchHHHHHHHH
Q 021575 114 GIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLG----------E-ALRRIREGAAMIRTKGEAGTGNIIEAVRHVR 182 (310)
Q Consensus 114 Gad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~----------e-a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r 182 (310)
|||.+..+.... .+..+.+++.+ ++.+.++..+.. . +..+.+.|++.+.+.+..
T Consensus 78 Gad~vtvh~~~g-~~~i~~~~~~~-gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~~------------- 142 (208)
T 2czd_A 78 GADYVIVHTFVG-RDSVMAVKELG-EIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGTR------------- 142 (208)
T ss_dssp TCSEEEEESTTC-HHHHHHHHTTS-EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCSS-------------
T ss_pred CCCEEEEeccCC-HHHHHHHHHhC-CcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCCC-------------
Confidence 999995332222 22344444433 555444432211 0 223445666666543210
Q ss_pred hhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCC-CCEEEeCCCCCCCHH--HHHHHHHcCCCEEEEccccccCC
Q 021575 183 SVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGR-LPVVHFAAGGVATPA--DAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 183 ~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~-iPVi~iA~GGI~t~~--d~~~~l~~GadgV~VGsai~~a~ 259 (310)
.+.++.+++..+ -+++ ..|||+ ++ ++.+++++|+|++++||+|++++
T Consensus 143 ---------------------------~~~i~~lr~~~~~~~~i--v~gGI~-~~g~~~~~~~~aGad~vvvGr~I~~a~ 192 (208)
T 2czd_A 143 ---------------------------PERIGYIRDRLKEGIKI--LAPGIG-AQGGKAKDAVKAGADYIIVGRAIYNAP 192 (208)
T ss_dssp ---------------------------THHHHHHHHHSCTTCEE--EECCCC-SSTTHHHHHHHHTCSEEEECHHHHTSS
T ss_pred ---------------------------hHHHHHHHHhCCCCeEE--EECCCC-CCCCCHHHHHHcCCCEEEEChHHhcCC
Confidence 112233333322 2455 469996 44 88899999999999999999999
Q ss_pred CHHHHHHHHHHHHh
Q 021575 260 DPVKRAQAIVRAVT 273 (310)
Q Consensus 260 dp~~~a~~l~~~i~ 273 (310)
||...++++++.++
T Consensus 193 dp~~~~~~l~~~i~ 206 (208)
T 2czd_A 193 NPREAAKAIYDEIR 206 (208)
T ss_dssp SHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHh
Confidence 99999998887664
No 128
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=98.67 E-value=3.4e-07 Score=86.25 Aligned_cols=153 Identities=20% Similarity=0.180 Sum_probs=95.1
Q ss_pred HHHHHHHHcCCcEEEecc------------C-CcccccccCCCCC--CC-CHHHHHHHHhhc--CcceeeccccCcHHHH
Q 021575 46 EQARVAEEAGACAVMALE------------R-VPADIRSQGGVAR--MS-DPQLIKEIKQSV--TIPVMAKARIGHFVEA 107 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~------------~-~~~~~~~~~G~~~--~~-~~~~i~~i~~~~--~iPv~vk~~~~~~~~a 107 (310)
+.|+.+.++|+|+| +|+ | .+.....+||+-. .+ ..+.++.+++++ +.||.++.....+..
T Consensus 162 ~aA~~a~~aGfDgV-Eih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~- 239 (363)
T 3l5l_A 162 DAARRARDAGFEWI-ELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDG- 239 (363)
T ss_dssp HHHHHHHHHTCSEE-EEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSS-
T ss_pred HHHHHHHHcCCCEE-EEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCC-
Confidence 35788899999997 664 2 1334445566521 01 135667778777 578888876431100
Q ss_pred HHHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccc
Q 021575 108 QILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGD 187 (310)
Q Consensus 108 ~~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~ 187 (310)
.. ..+..+. .+-++.+.+.|+|+|.+++....+..
T Consensus 240 --------------~G--~~~~~~~----------------~~la~~L~~~Gvd~i~vs~g~~~~~~------------- 274 (363)
T 3l5l_A 240 --------------RD--EQTLEES----------------IELARRFKAGGLDLLSVSVGFTIPDT------------- 274 (363)
T ss_dssp --------------CH--HHHHHHH----------------HHHHHHHHHTTCCEEEEEECCCSSCC-------------
T ss_pred --------------CC--CCCHHHH----------------HHHHHHHHHcCCCEEEEecCcccccc-------------
Confidence 00 0000011 12245566789999988753221100
Q ss_pred eEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHH
Q 021575 188 IRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 188 ~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~~a~dp~ 262 (310)
..+ . .....+++++.+++..++||+ +.|||.+++++.++++.| ||.|++||+++. ||.
T Consensus 275 --~~~--~---------~~~~~~~~~~~ir~~~~iPVi--~~GgI~s~e~a~~~l~~G~aD~V~iGR~~la--nPd 333 (363)
T 3l5l_A 275 --NIP--W---------GPAFMGPIAERVRREAKLPVT--SAWGFGTPQLAEAALQANQLDLVSVGRAHLA--DPH 333 (363)
T ss_dssp --CCC--C---------CTTTTHHHHHHHHHHHTCCEE--ECSSTTSHHHHHHHHHTTSCSEEECCHHHHH--CTT
T ss_pred --ccC--C---------CcchhHHHHHHHHHHcCCcEE--EeCCCCCHHHHHHHHHCCCccEEEecHHHHh--Cch
Confidence 000 0 012246677888887789998 789999999999999998 999999999998 554
No 129
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=98.64 E-value=1.6e-07 Score=88.94 Aligned_cols=148 Identities=17% Similarity=0.093 Sum_probs=92.9
Q ss_pred HHHHHHHHcCCcEEEecc------------CC-cccccccCCCCCCC----CHHHHHHHHhhcCc-ceeeccccCcHHHH
Q 021575 46 EQARVAEEAGACAVMALE------------RV-PADIRSQGGVARMS----DPQLIKEIKQSVTI-PVMAKARIGHFVEA 107 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~------------~~-~~~~~~~~G~~~~~----~~~~i~~i~~~~~i-Pv~vk~~~~~~~~a 107 (310)
+.|+.+.++|+|+| +|+ |. +...+.+||+ ... ..+.++.++++++- ||.++.....+..
T Consensus 170 ~aA~~a~~aGfDgV-EIh~a~GYLl~QFlsp~~N~R~D~yGGs-lenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~- 246 (377)
T 2r14_A 170 QAAQRAKRAGFDMV-EVHAANACLPNQFLATGTNRRTDQYGGS-IENRARFPLEVVDAVAEVFGPERVGIRLTPFLELF- 246 (377)
T ss_dssp HHHHHHHHHTCSEE-EEEECTTCHHHHHHSTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCT-
T ss_pred HHHHHHHHcCCCEE-EEcCcccchHHhccCCccccCCCccCcc-hhhchHHHHHHHHHHHHHcCCCcEEEEeccccccC-
Confidence 46778889999997 665 21 2334445665 221 13456677777742 9999876431000
Q ss_pred HHHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccc
Q 021575 108 QILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGD 187 (310)
Q Consensus 108 ~~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~ 187 (310)
|. ....+..+.. +-++++.+.|+|+|.++++.....
T Consensus 247 ------~~-----~~~~~~~~~~-------------------~la~~le~~Gvd~i~v~~~~~~~~-------------- 282 (377)
T 2r14_A 247 ------GL-----TDDEPEAMAF-------------------YLAGELDRRGLAYLHFNEPDWIGG-------------- 282 (377)
T ss_dssp ------TC-----CCSCHHHHHH-------------------HHHHHHHHTTCSEEEEECCC------------------
T ss_pred ------CC-----CCCCCHHHHH-------------------HHHHHHHHcCCCEEEEeCCcccCC--------------
Confidence 00 0000011111 225556678999999987532110
Q ss_pred eEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHH
Q 021575 188 IRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 188 ~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~~a~dp~ 262 (310)
....++++++.+++..++||+ ++||| +++++.++++.| ||+|++||+++. ||.
T Consensus 283 -----------------~~~~~~~~~~~ik~~~~iPvi--~~Ggi-~~~~a~~~l~~g~aD~V~igR~~l~--~P~ 336 (377)
T 2r14_A 283 -----------------DITYPEGFREQMRQRFKGGLI--YCGNY-DAGRAQARLDDNTADAVAFGRPFIA--NPD 336 (377)
T ss_dssp -------------------CCCTTHHHHHHHHCCSEEE--EESSC-CHHHHHHHHHTTSCSEEEESHHHHH--CTT
T ss_pred -----------------CCcchHHHHHHHHHHCCCCEE--EECCC-CHHHHHHHHHCCCceEEeecHHHHh--Cch
Confidence 001145677888888899998 67999 699999999987 999999999998 565
No 130
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=98.64 E-value=1.4e-07 Score=88.14 Aligned_cols=149 Identities=15% Similarity=0.147 Sum_probs=95.0
Q ss_pred HHHHHHHHcCCcEEEecc------------CC-cccccccCCCCC--CC-CHHHHHHHHhhc--CcceeeccccCcHHHH
Q 021575 46 EQARVAEEAGACAVMALE------------RV-PADIRSQGGVAR--MS-DPQLIKEIKQSV--TIPVMAKARIGHFVEA 107 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~------------~~-~~~~~~~~G~~~--~~-~~~~i~~i~~~~--~iPv~vk~~~~~~~~a 107 (310)
+.|+.+.++|+|+| +|+ |. +...+.+||+-. .+ ..+.++.+++++ +.||.++.....+..
T Consensus 147 ~AA~~a~~aGfDgV-Eih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~- 224 (343)
T 3kru_A 147 EAAKRANLAGYDVV-EIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYME- 224 (343)
T ss_dssp HHHHHHHHHTCSEE-EEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSST-
T ss_pred HHHhhccccCCceE-EEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhc-
Confidence 45788889999997 554 32 334455566531 11 136777788887 689999876532110
Q ss_pred HHHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEc-CCCCCcchHHHHHHHHhhcc
Q 021575 108 QILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTK-GEAGTGNIIEAVRHVRSVMG 186 (310)
Q Consensus 108 ~~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~-g~~~~~~~~~~~~~~r~~~~ 186 (310)
...+..+..++ ++.+.+. +|++.+. |......
T Consensus 225 --------------~g~~~~~~~~~-------------------a~~l~~~-vd~i~vs~g~~~~~~------------- 257 (343)
T 3kru_A 225 --------------GGINIDMMVEY-------------------INMIKDK-VDLIDVSSGGLLNVD------------- 257 (343)
T ss_dssp --------------TSCCHHHHHHH-------------------HHHHTTT-CSEEEEECCCSSCCC-------------
T ss_pred --------------cCccHHHHHHH-------------------HHHhhcc-ccEEeccCCceEeee-------------
Confidence 01112222222 3344566 8888874 3321100
Q ss_pred ceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHH
Q 021575 187 DIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 187 ~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~~a~dp~ 262 (310)
.. ......+++++.+++..++||+ +.|||.+++++.++++.| ||.|++|++++. ||.
T Consensus 258 -------~~--------~~~~~~~~~~~~ir~~~~iPVi--~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~la--nPd 315 (343)
T 3kru_A 258 -------IN--------LYPGYQVKYAETIKKRCNIKTS--AVGLITTQELAEEILSNERADLVALGRELLR--NPY 315 (343)
T ss_dssp -------CC--------CCTTTTHHHHHHHHHHHTCEEE--EESSCCCHHHHHHHHHTTSCSEEEESHHHHH--CTT
T ss_pred -------ec--------ccCceeehHHHHHHHhcCcccc--eeeeeeHHHHHHHHHhchhhHHHHHHHHHhc--CCe
Confidence 00 0012346778888887889998 789999999999999988 999999999998 665
No 131
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=98.63 E-value=7.6e-08 Score=92.30 Aligned_cols=155 Identities=12% Similarity=0.030 Sum_probs=93.5
Q ss_pred HHHHHHHHcCCcEEEecc------------C-CcccccccCCCCCC---C-CHHHHHHHHhhc------CcceeeccccC
Q 021575 46 EQARVAEEAGACAVMALE------------R-VPADIRSQGGVARM---S-DPQLIKEIKQSV------TIPVMAKARIG 102 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~------------~-~~~~~~~~~G~~~~---~-~~~~i~~i~~~~------~iPv~vk~~~~ 102 (310)
+.|+.+.++|+|+| +|+ | .+...+.+||+.+. + ..+.++++++++ +.||.++....
T Consensus 174 ~AA~rA~~AGfDgV-EIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~ 252 (419)
T 3l5a_A 174 DATLRAIKAGFDGV-EISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPE 252 (419)
T ss_dssp HHHHHHHHTTCSEE-EEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSC
T ss_pred HHHHHHHHcCCCEE-EECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccc
Confidence 46888899999997 664 2 24455666777411 1 235666777765 67888876543
Q ss_pred cHHHHHHHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHH-hCCCEEEEcCCCCCcchHHHHHHH
Q 021575 103 HFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIR-EGAAMIRTKGEAGTGNIIEAVRHV 181 (310)
Q Consensus 103 ~~~~a~~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~-~Gad~V~v~g~~~~~~~~~~~~~~ 181 (310)
.+.. |. ...+..+.. +-+..+.+ .|+|+|.++++.....
T Consensus 253 ~~~~-------~~------~G~~~ed~~-------------------~la~~L~~~~Gvd~I~vs~g~~~~~-------- 292 (419)
T 3l5a_A 253 ETRG-------SD------LGYTIDEFN-------------------QLIDWVMDVSNIQYLAIASWGRHIY-------- 292 (419)
T ss_dssp EEET-------TE------EEECHHHHH-------------------HHHHHHHHHSCCCCEEECCTTCCGG--------
T ss_pred cccC-------CC------CCCCHHHHH-------------------HHHHHHHhhcCCcEEEEeeCCcccc--------
Confidence 1100 00 001111111 22445667 8999999887542100
Q ss_pred HhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcC--CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 021575 182 RSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 182 r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~--~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~ 259 (310)
.... .. ......+++++.+++.. ++||+ +.|||.+++++.++++. ||.|++|++++.
T Consensus 293 --------~~~~-~~-------~g~~~~~~~a~~Ik~~v~~~iPVI--~~GgI~t~e~Ae~~L~~-aDlVaiGR~~Ia-- 351 (419)
T 3l5a_A 293 --------QNTS-RT-------PGDHFGRPVNQIVYEHLAGRIPLI--ASGGINSPESALDALQH-ADMVGMSSPFVT-- 351 (419)
T ss_dssp --------GCBC-CC-------SSTTTTSBHHHHHHHHHTTSSCEE--ECSSCCSHHHHHHHGGG-CSEEEESTHHHH--
T ss_pred --------cccc-CC-------CCccccHHHHHHHHHHcCCCCeEE--EECCCCCHHHHHHHHHh-CCcHHHHHHHHH--
Confidence 0000 00 00111234556666654 69998 78999999999999988 999999999997
Q ss_pred CHH
Q 021575 260 DPV 262 (310)
Q Consensus 260 dp~ 262 (310)
||.
T Consensus 352 nPd 354 (419)
T 3l5a_A 352 EPD 354 (419)
T ss_dssp CTT
T ss_pred CcH
Confidence 665
No 132
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=98.53 E-value=5.4e-07 Score=85.98 Aligned_cols=156 Identities=13% Similarity=0.012 Sum_probs=95.3
Q ss_pred HHHHHHHHcCCcEEEecc------------CC-cccccccCCCCC--CC-CHHHHHHHHhhcC-cceeeccccCcHHHHH
Q 021575 46 EQARVAEEAGACAVMALE------------RV-PADIRSQGGVAR--MS-DPQLIKEIKQSVT-IPVMAKARIGHFVEAQ 108 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~------------~~-~~~~~~~~G~~~--~~-~~~~i~~i~~~~~-iPv~vk~~~~~~~~a~ 108 (310)
+.|+.+.++|+|+| +|+ |. +...+.+||+.. .+ ..+.++.++++++ -||.++.....+..
T Consensus 175 ~AA~~a~~AGfDgV-EIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~-- 251 (402)
T 2hsa_B 175 RSALNAIEAGFDGI-EIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHL-- 251 (402)
T ss_dssp HHHHHHHHTTCSEE-EEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCST--
T ss_pred HHHHHHHHcCCCEE-EECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccC--
Confidence 46788899999997 665 22 334455566621 11 2356677787774 49999876541100
Q ss_pred HHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhC------CCEEEEcCCCCCcchHHHHHHHH
Q 021575 109 ILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREG------AAMIRTKGEAGTGNIIEAVRHVR 182 (310)
Q Consensus 109 ~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~G------ad~V~v~g~~~~~~~~~~~~~~r 182 (310)
|.+ ...+..+.. +-++.+.+.| +|+|.++++......
T Consensus 252 -----g~~-----~~~~~~~~~-------------------~la~~le~~G~~gg~~vd~i~v~~~~~~~~~-------- 294 (402)
T 2hsa_B 252 -----DAM-----DSNPLSLGL-------------------AVVERLNKIQLHSGSKLAYLHVTQPRYVAYG-------- 294 (402)
T ss_dssp -----TCC-----CSCHHHHHH-------------------HHHHHHHHHHHHHTSCCSEEEEECCCCCTTT--------
T ss_pred -----CCC-----CCCCHHHHH-------------------HHHHHHHhcCCccCCceEEEEEecCcccccc--------
Confidence 000 000011111 2244556778 999998865321100
Q ss_pred hhccceEeec--ccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccccCC
Q 021575 183 SVMGDIRVLR--NMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSG 259 (310)
Q Consensus 183 ~~~~~~~~l~--~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~~a~ 259 (310)
.-+ .++. ...++++++.+++..++||+ ++||| +++++.++++.| ||.|++|++++.
T Consensus 295 -------~~~~~~~~~---------~~~~~~~~~~vk~~~~iPvi--~~G~i-~~~~a~~~l~~g~aD~V~igR~~l~-- 353 (402)
T 2hsa_B 295 -------QTEAGRLGS---------EEEEARLMRTLRNAYQGTFI--CSGGY-TRELGIEAVAQGDADLVSYGRLFIS-- 353 (402)
T ss_dssp -------TSSSTTTTH---------HHHHHHHHHHHHHHCSSCEE--EESSC-CHHHHHHHHHTTSCSEEEESHHHHH--
T ss_pred -------CCccccccC---------CcchHHHHHHHHHHCCCCEE--EeCCC-CHHHHHHHHHCCCCceeeecHHHHh--
Confidence 000 0000 00135677888888899998 68999 999999999887 999999999998
Q ss_pred CHH
Q 021575 260 DPV 262 (310)
Q Consensus 260 dp~ 262 (310)
||.
T Consensus 354 dP~ 356 (402)
T 2hsa_B 354 NPD 356 (402)
T ss_dssp CTT
T ss_pred Cch
Confidence 676
No 133
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=98.53 E-value=5.5e-06 Score=74.83 Aligned_cols=165 Identities=21% Similarity=0.258 Sum_probs=108.2
Q ss_pred CCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeecccc--C---c--------HHHHHH
Q 021575 43 VTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARI--G---H--------FVEAQI 109 (310)
Q Consensus 43 ~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~--~---~--------~~~a~~ 109 (310)
.+++-+.+++++||++| +||.. -..+| +.+.+..++.+++.+++||-+..+. + + .++++.
T Consensus 47 ~s~~~a~~A~~gGAdRI-ELc~~----l~~GG--lTPS~g~i~~a~~~~~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~ 119 (287)
T 3iwp_A 47 DSVESAVNAERGGADRI-ELCSG----LSEGG--TTPSMGVLQVVKQSVQIPVFVMIRPRGGDFLYSDREIEVMKADIRL 119 (287)
T ss_dssp SSHHHHHHHHHHTCSEE-EECBC----GGGTC--BCCCHHHHHHHHTTCCSCEEEECCSSSSCSCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCEE-EECCC----CCCCC--CCCCHHHHHHHHHhcCCCeEEEEecCCCCcccCHHHHHHHHHHHHH
Confidence 57799999999999997 88611 11122 2456789999999899999886554 2 1 257888
Q ss_pred HHHcCCCEEE-e---CCC-CCchhHHHHHHhcCCCCcEEE----e-cCCHHHHHH-HHHhCCCEEEEcCCCCCcchHHHH
Q 021575 110 LEAIGIDYVD-E---SEV-LTPADEENHINKHNFRIPFVC----G-CRNLGEALR-RIREGAAMIRTKGEAGTGNIIEAV 178 (310)
Q Consensus 110 ~~~aGad~Vi-~---~~~-~~~~~~~~~i~~~~~~i~~~v----~-~~t~~ea~~-~~~~Gad~V~v~g~~~~~~~~~~~ 178 (310)
+.++|||+|+ + .+. +......++++..+ ++.+.. | +.+..++.. +.++|++.|-++|...+
T Consensus 120 ~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~-~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~~~~------- 191 (287)
T 3iwp_A 120 AKLYGADGLVFGALTEDGHIDKELCMSLMAICR-PLPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCDSS------- 191 (287)
T ss_dssp HHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHT-TSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTTSSS-------
T ss_pred HHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcC-CCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCC-------
Confidence 9999999996 3 232 44455566665532 132221 1 335555555 55779998887663211
Q ss_pred HHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCCCCCCCHHHHHHHHH-cCCCEEEEc
Q 021575 179 RHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVG 252 (310)
Q Consensus 179 ~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~GGI~t~~d~~~~l~-~GadgV~VG 252 (310)
.....+.++++.+. .+++|+ +.||| +++++.++++ +|++.+-..
T Consensus 192 ---------------------------a~~Gl~~Lk~Lv~~a~~rI~Im--aGGGV-~~~Ni~~l~~~tG~~~~H~S 238 (287)
T 3iwp_A 192 ---------------------------ALEGLPLIKRLIEQAKGRIVVM--PGGGI-TDRNLQRILEGSGATEFHCS 238 (287)
T ss_dssp ---------------------------TTTTHHHHHHHHHHHTTSSEEE--ECTTC-CTTTHHHHHHHHCCSEEEEC
T ss_pred ---------------------------hHHhHHHHHHHHHHhCCCCEEE--ECCCc-CHHHHHHHHHhhCCCEEeEC
Confidence 01124455555432 357887 78999 6999999986 999988765
No 134
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.53 E-value=5.9e-07 Score=90.94 Aligned_cols=154 Identities=18% Similarity=0.140 Sum_probs=95.7
Q ss_pred HHHHHHHHcCCcEEEecc------------CC-cccccccCCCCCCC----CHHHHHHHHhhc--CcceeeccccCcHHH
Q 021575 46 EQARVAEEAGACAVMALE------------RV-PADIRSQGGVARMS----DPQLIKEIKQSV--TIPVMAKARIGHFVE 106 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~------------~~-~~~~~~~~G~~~~~----~~~~i~~i~~~~--~iPv~vk~~~~~~~~ 106 (310)
+.|+.+.++|+|+| +++ |. +...+.+||+ ... ..+.++.+++++ +.|+.++.....+.
T Consensus 145 ~aA~~a~~aGfd~v-eih~~~gyl~~qFlsp~~n~r~d~yGgs-~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~- 221 (671)
T 1ps9_A 145 RCAQLAREAGYDGV-EVMGSEGYLINEFLTLRTNQRSDQWGGD-YRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLV- 221 (671)
T ss_dssp HHHHHHHHTTCSEE-EEEECBTSHHHHHHCTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCS-
T ss_pred HHHHHHHHcCCCEE-EEccccchHHHHhCCCccCCCcCcCCCc-HHHHHHHHHHHHHHHHHHcCCCceEEEEECccccC-
Confidence 45788899999997 664 21 3344455665 221 235666777777 78888877643100
Q ss_pred HHHHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhcc
Q 021575 107 AQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMG 186 (310)
Q Consensus 107 a~~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~ 186 (310)
....+..+.. +-++.+.+.|+|++.+++.....
T Consensus 222 --------------~~g~~~~~~~-------------------~~a~~l~~~g~d~i~v~~~~~~~-------------- 254 (671)
T 1ps9_A 222 --------------EDGGTFAETV-------------------ELAQAIEAAGATIINTGIGWHEA-------------- 254 (671)
T ss_dssp --------------TTCCCHHHHH-------------------HHHHHHHHHTCSEEEEEECBTTC--------------
T ss_pred --------------CCCCCHHHHH-------------------HHHHHHHhcCCCEEEcCCCcccc--------------
Confidence 0011112211 22445667899999887532111
Q ss_pred ceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccccCCC
Q 021575 187 DIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGD 260 (310)
Q Consensus 187 ~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~~a~d 260 (310)
..++.... .......++++.+++..++||+ +.|||.+++++.++++.| ||+|++||+++..+|
T Consensus 255 ---~~~~~~~~------~~~~~~~~~~~~i~~~~~iPvi--~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~~P~ 318 (671)
T 1ps9_A 255 ---RIPTIATP------VPRGAFSWVTRKLKGHVSLPLV--TTNRINDPQVADDILSRGDADMVSMARPFLADAE 318 (671)
T ss_dssp ---SSCSSSTT------SCTTTTHHHHHHHTTSCSSCEE--ECSSCCSHHHHHHHHHTTSCSEEEESTHHHHCTT
T ss_pred ---cccccccc------CCcchHHHHHHHHHHhcCceEE--EeCCCCCHHHHHHHHHcCCCCEEEeCHHHHhCcH
Confidence 01111100 0011235788889988899998 789999999999999988 999999999998433
No 135
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.50 E-value=6e-07 Score=88.07 Aligned_cols=128 Identities=16% Similarity=0.147 Sum_probs=84.6
Q ss_pred HHHHHHHHHcCCCEEEe--CCCCC--chhHHHHHHhcCCC-CcEEE-ecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHH
Q 021575 104 FVEAQILEAIGIDYVDE--SEVLT--PADEENHINKHNFR-IPFVC-GCRNLGEALRRIREGAAMIRTKGEAGTGNIIEA 177 (310)
Q Consensus 104 ~~~a~~~~~aGad~Vi~--~~~~~--~~~~~~~i~~~~~~-i~~~v-~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~ 177 (310)
.+.++.+.+.|++.+.. +.... ..+..+.+++..++ +++++ .+.+.++++.+.++|+|++.+ |.++++ ++..
T Consensus 244 ~e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~aGad~I~V-g~~~g~-~~~~ 321 (503)
T 1me8_A 244 RERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVGAGNIVDGEGFRYLADAGADFIKI-GIGGGS-ICIT 321 (503)
T ss_dssp HHHHHHHHHHTCSEEEECCSCCCSHHHHHHHHHHHHHHGGGSCEEEEEECSHHHHHHHHHHTCSEEEE-CSSCST-TCCS
T ss_pred HHHHHHHHhhhccceEEecccCcccchhhHHHHHHHhCCCCceEeeccccCHHHHHHHHHhCCCeEEe-cccCCc-Cccc
Confidence 45577888889999853 32222 22334555554345 66665 488999999999999999988 443321 1100
Q ss_pred HHHHHhhccceEeecccChhHHHHhhhcc-CCcHHHHHHHhhc---C------CCCEEEeCCCCCCCHHHHHHHHHcCCC
Q 021575 178 VRHVRSVMGDIRVLRNMDDDEVFTFAKKI-AAPYDLVMQTKQL---G------RLPVVHFAAGGVATPADAAMMMQLGCD 247 (310)
Q Consensus 178 ~~~~r~~~~~~~~l~~~~~d~~~~~~~~~-~~~~~~i~~i~~~---~------~iPVi~iA~GGI~t~~d~~~~l~~Gad 247 (310)
+.+. +. .+....+.++.+. . ++||+ ++|||+++.|+.+++.+|||
T Consensus 322 -----------r~~~------------~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvi--a~GGi~~~~di~kAlalGA~ 376 (503)
T 1me8_A 322 -----------REQK------------GIGRGQATAVIDVVAERNKYFEETGIYIPVC--SDGGIVYDYHMTLALAMGAD 376 (503)
T ss_dssp -----------TTTT------------CCCCCHHHHHHHHHHHHHHHHHHHSEECCEE--EESCCCSHHHHHHHHHTTCS
T ss_pred -----------cccc------------CCCCchHHHHHHHHHHHHHHhhhcCCCceEE--EeCCCCCHHHHHHHHHcCCC
Confidence 0000 11 2234444444332 1 58998 89999999999999999999
Q ss_pred EEEEccccccC
Q 021575 248 GVFVGSGVFKS 258 (310)
Q Consensus 248 gV~VGsai~~a 258 (310)
+|++|+.|+.+
T Consensus 377 ~V~iG~~~~~~ 387 (503)
T 1me8_A 377 FIMLGRYFARF 387 (503)
T ss_dssp EEEESHHHHTB
T ss_pred EEEECchhhcc
Confidence 99999999764
No 136
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=98.49 E-value=9.1e-07 Score=77.85 Aligned_cols=43 Identities=28% Similarity=0.355 Sum_probs=33.6
Q ss_pred cHHHHHHHhhcC--CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcc
Q 021575 209 PYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGS 253 (310)
Q Consensus 209 ~~~~i~~i~~~~--~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGs 253 (310)
.++.++.+++.. ++||+ ++|||+|++|+.+++++|||.|.+++
T Consensus 161 ~~~~i~~v~~~v~~~ipVi--a~GGI~t~~da~~~l~aGA~~iG~s~ 205 (225)
T 1mzh_A 161 TLEEVRLIKSSAKGRIKVK--ASGGIRDLETAISMIEAGADRIGTSS 205 (225)
T ss_dssp CHHHHHHHHHHHTTSSEEE--EESSCCSHHHHHHHHHTTCSEEEESC
T ss_pred CHHHHHHHHHHhCCCCcEE--EECCCCCHHHHHHHHHhCchHHHHcc
Confidence 455566666543 79998 78999999999999999999655443
No 137
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=98.46 E-value=4.4e-07 Score=85.88 Aligned_cols=149 Identities=14% Similarity=0.030 Sum_probs=90.6
Q ss_pred HHHHHHHHcCCcEEEecc------------CC-cccccccCCCCCCC----CHHHHHHHHhhcCc-ceeeccccCcHHHH
Q 021575 46 EQARVAEEAGACAVMALE------------RV-PADIRSQGGVARMS----DPQLIKEIKQSVTI-PVMAKARIGHFVEA 107 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~------------~~-~~~~~~~~G~~~~~----~~~~i~~i~~~~~i-Pv~vk~~~~~~~~a 107 (310)
+.|+.+.++|+|+| +|+ |. +...+.+||+. .. ..+.++.++++++- ||.++.....+.
T Consensus 171 ~AA~~a~~aGfDgV-Eih~a~GyLl~qFlsp~~N~R~D~yGGsl-enR~r~~~eiv~aVr~avg~~~V~vrls~~~~~-- 246 (376)
T 1icp_A 171 VAARNAIEAGFDGV-EIHGAHGYLIDQFMKDQVNDRSDKYGGSL-ENRCRFALEIVEAVANEIGSDRVGIRISPFAHY-- 246 (376)
T ss_dssp HHHHHHHHTTCSEE-EEEECTTSHHHHHHCTTTCCCCSTTSSSH-HHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCT--
T ss_pred HHHHHHHHcCCCEE-EEcCccchhhhhccCCcccCCCCccCccH-HHhHHHHHHHHHHHHHHhcCCceEEEecccccc--
Confidence 46778889999997 664 11 23334456652 21 23566777877742 999887643110
Q ss_pred HHHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccc
Q 021575 108 QILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGD 187 (310)
Q Consensus 108 ~~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~ 187 (310)
.|.+ ...+..+.. +-++++.+.|+|+|.++++.....
T Consensus 247 -----~g~~-----~~~~~~~~~-------------------~la~~le~~Gvd~i~v~~~~~~~~-------------- 283 (376)
T 1icp_A 247 -----NEAG-----DTNPTALGL-------------------YMVESLNKYDLAYCHVVEPRMKTA-------------- 283 (376)
T ss_dssp -----TTCC-----CSCHHHHHH-------------------HHHHHHGGGCCSEEEEECCSCCC---------------
T ss_pred -----CCCC-----CCCCHHHHH-------------------HHHHHHHHcCCCEEEEcCCcccCC--------------
Confidence 0000 000011111 224456678999999886532110
Q ss_pred eEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHH
Q 021575 188 IRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 188 ~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~~a~dp~ 262 (310)
.+ . ...++.++.+++..++||+ ++||| +++++.++++.| ||.|++||+++. ||.
T Consensus 284 -------~~--------~-~~~~~~~~~vr~~~~iPvi--~~G~i-~~~~a~~~l~~g~aD~V~~gR~~l~--~P~ 338 (376)
T 1icp_A 284 -------WE--------K-IECTESLVPMRKAYKGTFI--VAGGY-DREDGNRALIEDRADLVAYGRLFIS--NPD 338 (376)
T ss_dssp ---------------------CCCCSHHHHHHCCSCEE--EESSC-CHHHHHHHHHTTSCSEEEESHHHHH--CTT
T ss_pred -------CC--------c-cccHHHHHHHHHHcCCCEE--EeCCC-CHHHHHHHHHCCCCcEEeecHHHHh--Ccc
Confidence 00 0 0012345567777789998 78999 899999999887 999999999998 675
No 138
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=98.46 E-value=4e-06 Score=72.45 Aligned_cols=49 Identities=18% Similarity=0.289 Sum_probs=43.1
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~ 259 (310)
..+.+.+++...++|++ +.||+.+++++.++++.|+|++++||+++..+
T Consensus 162 ~~~~i~~~~~~~~~Pvi--a~~g~~~~~~~~~~~~~G~~~~~vg~a~~~~~ 210 (237)
T 3cwo_X 162 DTEMIRFVRPLTTLPII--ASGGAGKMEHFLEAFLAGADAALAASVFHFRE 210 (237)
T ss_dssp CHHHHHHHGGGCCSCEE--EESCCCSHHHHHHHHHHTCSEEEESHHHHTTS
T ss_pred cHHHHHHHHHhcCCCEE--ecCCCCCHHHHHHHHHcCcHHHhhhHHHHcCC
Confidence 36778888887899999 56999999999999999999999999997643
No 139
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=98.44 E-value=2e-06 Score=80.81 Aligned_cols=141 Identities=16% Similarity=0.084 Sum_probs=89.1
Q ss_pred HHHHHHHHcCCcEEEecc------------C-CcccccccCCCCC--CC-CHHHHHHHHhhcCc-ceeeccccCcHHHHH
Q 021575 46 EQARVAEEAGACAVMALE------------R-VPADIRSQGGVAR--MS-DPQLIKEIKQSVTI-PVMAKARIGHFVEAQ 108 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~------------~-~~~~~~~~~G~~~--~~-~~~~i~~i~~~~~i-Pv~vk~~~~~~~~a~ 108 (310)
+.|+.+.++|+|+| +|+ | .+...+.+||+-. .+ ..+.++.++++++- ||.++.....+.
T Consensus 157 ~AA~~a~~aGfDgV-Eih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~--- 232 (362)
T 4ab4_A 157 SGAENAKAAGFDGV-EIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADA--- 232 (362)
T ss_dssp HHHHHHHHTTCSEE-EEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCS---
T ss_pred HHHHHHHHcCCCEE-EECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccc---
Confidence 46788899999997 665 2 2344555666621 11 13466667777632 898887643100
Q ss_pred HHHHcCCCEEEeCCCCCch-hHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccc
Q 021575 109 ILEAIGIDYVDESEVLTPA-DEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGD 187 (310)
Q Consensus 109 ~~~~aGad~Vi~~~~~~~~-~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~ 187 (310)
...... ..... .+-++.+.+.|+|+|.++++. .+
T Consensus 233 -------------~g~~~~~~~~~~----------------~~la~~l~~~Gvd~i~v~~~~-~~--------------- 267 (362)
T 4ab4_A 233 -------------HDMGDADRAETF----------------TYVARELGKRGIAFICSRERE-AD--------------- 267 (362)
T ss_dssp -------------SSCCCTTHHHHH----------------HHHHHHHHHTTCSEEEEECCC-CT---------------
T ss_pred -------------cccCCCCcHHHH----------------HHHHHHHHHhCCCEEEECCCC-CC---------------
Confidence 000000 00000 122455667899999987643 11
Q ss_pred eEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHH
Q 021575 188 IRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 188 ~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~~a~dp~ 262 (310)
. ++++.+++..++||+ +.||+ +++++.++++.| ||.|++|++++. ||.
T Consensus 268 -------------------~---~~~~~ik~~~~iPvi--~~Ggi-t~e~a~~~l~~g~aD~V~iGR~~la--nPd 316 (362)
T 4ab4_A 268 -------------------D---SIGPLIKEAFGGPYI--VNERF-DKASANAALASGKADAVAFGVPFIA--NPD 316 (362)
T ss_dssp -------------------T---CCHHHHHHHHCSCEE--EESSC-CHHHHHHHHHTTSCSEEEESHHHHH--CTT
T ss_pred -------------------H---HHHHHHHHHCCCCEE--EeCCC-CHHHHHHHHHcCCccEEEECHHhHh--CcH
Confidence 0 134556666678998 67999 999999999987 999999999998 665
No 140
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=98.43 E-value=1.1e-06 Score=82.73 Aligned_cols=142 Identities=17% Similarity=0.086 Sum_probs=89.8
Q ss_pred HHHHHHHHcCCcEEEecc------------C-CcccccccCCCCC--CC-CHHHHHHHHhhcCc-ceeeccccCcHHHHH
Q 021575 46 EQARVAEEAGACAVMALE------------R-VPADIRSQGGVAR--MS-DPQLIKEIKQSVTI-PVMAKARIGHFVEAQ 108 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~------------~-~~~~~~~~~G~~~--~~-~~~~i~~i~~~~~i-Pv~vk~~~~~~~~a~ 108 (310)
+.|+.+.++|+|+| +|+ | .+...+.+||+-. .+ ..+.++.++++++- ||.++.....+.
T Consensus 165 ~AA~~A~~aGfDgV-Eih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~--- 240 (361)
T 3gka_A 165 RGAENARAAGFDGV-EVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDA--- 240 (361)
T ss_dssp HHHHHHHHTTCSEE-EEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCS---
T ss_pred HHHHHHHHcCCCEE-EECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEeccccccc---
Confidence 46888899999997 665 2 2344555666631 11 23567777877742 898877643100
Q ss_pred HHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccce
Q 021575 109 ILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDI 188 (310)
Q Consensus 109 ~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~ 188 (310)
.|.+ ...+..+.. +-++.+.+.|+|+|.++++.. +
T Consensus 241 ----~g~~-----~~~~~~~~~-------------------~la~~l~~~Gvd~i~v~~~~~-~---------------- 275 (361)
T 3gka_A 241 ----HTMG-----DSDPAATFG-------------------HVARELGRRRIAFLFARESFG-G---------------- 275 (361)
T ss_dssp ----SSCC-----CSCHHHHHH-------------------HHHHHHHHTTCSEEEEECCCS-T----------------
T ss_pred ----CCCC-----CCCcHHHHH-------------------HHHHHHHHcCCCEEEECCCCC-C----------------
Confidence 0000 000000111 224556678999999876421 1
Q ss_pred EeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHH
Q 021575 189 RVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 189 ~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~~a~dp~ 262 (310)
. ++++.+++..++||+ +.||| +++++.++++.| ||.|++|++++. ||.
T Consensus 276 ------------------~---~~~~~ik~~~~iPvi--~~Ggi-t~e~a~~~l~~G~aD~V~iGR~~la--dPd 324 (361)
T 3gka_A 276 ------------------D---AIGQQLKAAFGGPFI--VNENF-TLDSAQAALDAGQADAVAWGKLFIA--NPD 324 (361)
T ss_dssp ------------------T---CCHHHHHHHHCSCEE--EESSC-CHHHHHHHHHTTSCSEEEESHHHHH--CTT
T ss_pred ------------------H---HHHHHHHHHcCCCEE--EeCCC-CHHHHHHHHHcCCccEEEECHHhHh--CcH
Confidence 0 134556666678998 67999 999999999987 999999999998 665
No 141
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=98.37 E-value=2e-06 Score=81.37 Aligned_cols=46 Identities=15% Similarity=0.070 Sum_probs=41.2
Q ss_pred HHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHH
Q 021575 211 DLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 211 ~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~~a~dp~ 262 (310)
+ ++.+++..++||+ +.||| +++++.++++.| ||.|++|++++. ||.
T Consensus 298 ~-~~~ir~~~~iPvi--~~G~i-t~~~a~~~l~~g~aD~V~igR~~l~--~P~ 344 (379)
T 3aty_A 298 V-VAWVRGSYSGVKI--SNLRY-DFEEADQQIREGKVDAVAFGAKFIA--NPD 344 (379)
T ss_dssp H-HHHHHTTCCSCEE--EESSC-CHHHHHHHHHTTSCSEEEESHHHHH--CTT
T ss_pred H-HHHHHHHCCCcEE--EECCC-CHHHHHHHHHcCCCeEEEecHHHHh--CcH
Confidence 5 7788888899998 67999 899999999987 999999999998 665
No 142
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=98.35 E-value=5.1e-05 Score=67.41 Aligned_cols=167 Identities=20% Similarity=0.259 Sum_probs=108.4
Q ss_pred CCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeecccc--Cc-----------HHHHH
Q 021575 42 VVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARI--GH-----------FVEAQ 108 (310)
Q Consensus 42 ~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~--~~-----------~~~a~ 108 (310)
+.+++-|.+++++||+.| +||... . .+| +.+++..++.+++.+++||.+..|. ++ .++++
T Consensus 8 ~~s~~~a~~A~~~GAdRI-ELc~~L---~-~GG--lTPS~g~i~~~~~~~~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~ 80 (256)
T 1twd_A 8 CYSMECALTAQQNGADRV-ELCAAP---K-EGG--LTPSLGVLKSVRQRVTIPVHPIIRPRGGDFCYSDGEFAAILEDVR 80 (256)
T ss_dssp ESSHHHHHHHHHTTCSEE-EECBCG---G-GTC--BCCCHHHHHHHHHHCCSCEEEBCCSSSSCSCCCHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHcCCCEE-EEcCCc---c-cCC--CCCCHHHHHHHHHHcCCceEEEECCCCCCCcCCHHHHHHHHHHHH
Confidence 356789999999999998 886221 1 122 2466889999999999999987665 21 25677
Q ss_pred HHHHcCCCEEE-e---CCC-CCchhHHHHHHhcCCCCcEEE----e-cCCHHHHHH-HHHhCCCEEEEcCCCCCcchHHH
Q 021575 109 ILEAIGIDYVD-E---SEV-LTPADEENHINKHNFRIPFVC----G-CRNLGEALR-RIREGAAMIRTKGEAGTGNIIEA 177 (310)
Q Consensus 109 ~~~~aGad~Vi-~---~~~-~~~~~~~~~i~~~~~~i~~~v----~-~~t~~ea~~-~~~~Gad~V~v~g~~~~~~~~~~ 177 (310)
.+.++|+|+|+ + .+. +......+++...+ +++++. | +.+..++.. +.++|++-|-++|...+
T Consensus 81 ~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~-~~~vTFHRAfD~~~d~~~ale~L~~lG~~rILTSG~~~~------ 153 (256)
T 1twd_A 81 TVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAG-PLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSGQKSD------ 153 (256)
T ss_dssp HHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHT-TSEEEECGGGGGCSCHHHHHHHHHHHTCCEEEECTTSSS------
T ss_pred HHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhC-CCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCC------
Confidence 88899999996 2 222 33444455554321 233222 1 455555544 56789988777653210
Q ss_pred HHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcC-CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcc
Q 021575 178 VRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGS 253 (310)
Q Consensus 178 ~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~-~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGs 253 (310)
.....+.++++.+.. ++.|+ ++||| +++++.+++.+|+..+-.+.
T Consensus 154 ----------------------------a~~g~~~L~~Lv~~a~~i~Im--~GgGv-~~~Ni~~l~~tGv~e~H~Sa 199 (256)
T 1twd_A 154 ----------------------------ALQGLSKIMELIAHRDAPIIM--AGAGV-RAENLHHFLDAGVLEVHSSA 199 (256)
T ss_dssp ----------------------------TTTTHHHHHHHHTSSSCCEEE--EESSC-CTTTHHHHHHHTCSEEEECC
T ss_pred ----------------------------HHHHHHHHHHHHHhhCCcEEE--ecCCc-CHHHHHHHHHcCCCeEeECC
Confidence 112245566665433 44454 79999 69999998889999998664
No 143
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.35 E-value=1.2e-06 Score=88.92 Aligned_cols=50 Identities=24% Similarity=0.341 Sum_probs=44.4
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHH
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~~a~dp~ 262 (310)
.+++++.+++..++||+ +.|||.+++++.++++.| ||.|++|++++. ||+
T Consensus 282 ~~~~~~~i~~~~~~pvi--~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~--~P~ 332 (690)
T 3k30_A 282 QEEFVAGLKKLTTKPVV--GVGRFTSPDAMVRQIKAGILDLIGAARPSIA--DPF 332 (690)
T ss_dssp THHHHTTSGGGCSSCEE--ECSCCCCHHHHHHHHHTTSCSEEEESHHHHH--CTT
T ss_pred cHHHHHHHHHHcCCeEE--EeCCCCCHHHHHHHHHCCCcceEEEcHHhHh--Ccc
Confidence 35677788888899998 789999999999999887 999999999997 776
No 144
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=98.28 E-value=1.4e-05 Score=69.81 Aligned_cols=176 Identities=17% Similarity=0.193 Sum_probs=106.6
Q ss_pred CHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHH---hhcCcceeecccc--Cc-----------HHHH
Q 021575 44 TPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIK---QSVTIPVMAKARI--GH-----------FVEA 107 (310)
Q Consensus 44 ~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~---~~~~iPv~vk~~~--~~-----------~~~a 107 (310)
+++.|..++++||+.| +||.. .. .+| +.+++..++.++ +.+++||.+..|. ++ .+++
T Consensus 10 s~~~a~~A~~~GAdRI-ELc~~---L~-~GG--lTPS~g~i~~~~~~~~~~~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di 82 (224)
T 2bdq_A 10 NLTDLTRLDKAIISRV-ELCDN---LA-VGG--TTPSYGVIKEANQYLHEKGISVAVMIRPRGGNFVYNDLELRIMEEDI 82 (224)
T ss_dssp TTTTGGGCCTTTCCEE-EEEBC---GG-GTC--BCCCHHHHHHHHHHHHHTTCEEEEECCSSSSCSCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEE-EEcCC---cc-cCC--cCCCHHHHHHHHHhhhhcCCceEEEECCCCCCCcCCHHHHHHHHHHH
Confidence 4566777889999998 88622 11 122 245678888888 8899999887665 21 2567
Q ss_pred HHHHHcCCCEEE-e---CCC-CCchhHHHHHHhcCCCCcEEE----e-c--CCHHHHHH-HHHhCCCEEEEcCCCCCcch
Q 021575 108 QILEAIGIDYVD-E---SEV-LTPADEENHINKHNFRIPFVC----G-C--RNLGEALR-RIREGAAMIRTKGEAGTGNI 174 (310)
Q Consensus 108 ~~~~~aGad~Vi-~---~~~-~~~~~~~~~i~~~~~~i~~~v----~-~--~t~~ea~~-~~~~Gad~V~v~g~~~~~~~ 174 (310)
+.+.++|+|+|+ + .+. +......+++...+ +++++. | + .+..++.. +.++|++-|-++|...+...
T Consensus 83 ~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~-~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rILTSG~~~~~~a 161 (224)
T 2bdq_A 83 LRAVELESDALVLGILTSNNHIDTEAIEQLLPATQ-GLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRILLHGSSNGEPI 161 (224)
T ss_dssp HHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHT-TCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEEECSCSSCCCG
T ss_pred HHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhC-CCeEEEECchhccCCcCHHHHHHHHHHcCCCEEECCCCCCCCcH
Confidence 788899999996 2 222 34444455554421 233222 2 3 45555544 56889988877764321100
Q ss_pred HHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCCCCCCCHHHHHHHH-HcCCCEEEE
Q 021575 175 IEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAAGGVATPADAAMMM-QLGCDGVFV 251 (310)
Q Consensus 175 ~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~GGI~t~~d~~~~l-~~GadgV~V 251 (310)
....+.++++.+. .++.|+ +.||| +++++.+++ .+|++.+-.
T Consensus 162 --------------------------------~~g~~~L~~Lv~~a~~ri~Im--~GgGV-~~~Ni~~l~~~tGv~e~H~ 206 (224)
T 2bdq_A 162 --------------------------------IENIKHIKALVEYANNRIEIM--VGGGV-TAENYQYICQETGVKQAHG 206 (224)
T ss_dssp --------------------------------GGGHHHHHHHHHHHTTSSEEE--ECSSC-CTTTHHHHHHHHTCCEEEE
T ss_pred --------------------------------HHHHHHHHHHHHhhCCCeEEE--eCCCC-CHHHHHHHHHhhCCCEEcc
Confidence 1123444444332 345565 79999 699999988 689999998
Q ss_pred ccccccCCCHH
Q 021575 252 GSGVFKSGDPV 262 (310)
Q Consensus 252 Gsai~~a~dp~ 262 (310)
.+.+.++.+|.
T Consensus 207 s~i~~~~~~~~ 217 (224)
T 2bdq_A 207 TRITQMAGDPL 217 (224)
T ss_dssp TTCC-------
T ss_pred ccccCCCCCcc
Confidence 77777777875
No 145
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.26 E-value=5.3e-06 Score=84.87 Aligned_cols=50 Identities=22% Similarity=0.322 Sum_probs=45.2
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHH
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~~a~dp~ 262 (310)
.+++++.+++..++||+ +.|||.+++++.++++.| ||.|++|++++. ||.
T Consensus 279 ~~~~~~~i~~~~~~pvi--~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l~--~P~ 329 (729)
T 1o94_A 279 TIPWVKLVKQVSKKPVL--GVGRYTDPEKMIEIVTKGYADIIGCARPSIA--DPF 329 (729)
T ss_dssp THHHHHHHHTTCSSCEE--CCSCCCCHHHHHHHHHTTSCSBEEESHHHHH--CTT
T ss_pred cHHHHHHHHHHCCCEEE--EeCCCCCHHHHHHHHHCCCCCEEEeCchhhc--Cch
Confidence 46778889988899998 899999999999999887 999999999998 775
No 146
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.24 E-value=4.8e-05 Score=65.73 Aligned_cols=185 Identities=17% Similarity=0.194 Sum_probs=110.3
Q ss_pred CCCHHHHHHHHHcCCcEE-EeccCCcccccccCCCCCCCCHHHHHHHHhhcC-cceeeccccC-c-HHHHHHHHHcCCCE
Q 021575 42 VVTPEQARVAEEAGACAV-MALERVPADIRSQGGVARMSDPQLIKEIKQSVT-IPVMAKARIG-H-FVEAQILEAIGIDY 117 (310)
Q Consensus 42 ~~~~~~A~~~~~~Ga~~i-~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~-iPv~vk~~~~-~-~~~a~~~~~aGad~ 117 (310)
+++++.|+.+.++|||++ +... ..|.+.-+++..+++.+.+. -+..+..+.+ . .+..+.+.+.+.|.
T Consensus 8 it~~eda~~a~~~GaD~iGfif~---------~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~ 78 (203)
T 1v5x_A 8 ITRLEDALLAEALGAFALGFVLA---------PGSRRRIAPEAARAIGEALGPFVVRVGVFRDQPPEEVLRLMEEARLQV 78 (203)
T ss_dssp CCCHHHHHHHHHHTCSEEEEECC---------TTCTTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHTTCSE
T ss_pred CCcHHHHHHHHHcCCCEEEEEec---------CCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCE
Confidence 688999999999999987 2221 12323345788888876542 1222333333 2 34456778899999
Q ss_pred EEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCC-CCCcchHHHHHHHHhhccceEeecccCh
Q 021575 118 VDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGE-AGTGNIIEAVRHVRSVMGDIRVLRNMDD 196 (310)
Q Consensus 118 Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~-~~~~~~~~~~~~~r~~~~~~~~l~~~~~ 196 (310)
|-.+...++..+.. +. .+..+.-.+.+++..+. .+....+|++-+... +++|.
T Consensus 79 vQLHG~e~~~~~~~-l~-~~~~vika~~v~~~~~l-~~~~~~~d~~LlD~~~gGtG~----------------------- 132 (203)
T 1v5x_A 79 AQLHGEEPPEWAEA-VG-RFYPVIKAFPLEGPARP-EWADYPAQALLLDGKRPGSGE----------------------- 132 (203)
T ss_dssp EEECSCCCHHHHHH-HT-TTSCEEEEEECSSSCCG-GGGGSSCSEEEEECSSTTSCC-----------------------
T ss_pred EEECCCCCHHHHHH-hc-cCCCEEEEEEcCChHhh-hhhhcCCCEEEEcCCCCCCCC-----------------------
Confidence 95444444544433 32 12222223344443333 222333777765543 23331
Q ss_pred hHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccC---CCHHHHHHHHHHHHh
Q 021575 197 DEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS---GDPVKRAQAIVRAVT 273 (310)
Q Consensus 197 d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a---~dp~~~a~~l~~~i~ 273 (310)
.-+|.+++.+.. .+.|++ .+||+ +++++.+++..+++||=|.|.+=.+ .|+. ..++|++.++
T Consensus 133 ----------~fdW~~l~~~~~-~~~p~~--LAGGL-~peNV~~ai~~~p~gVDvsSGvE~~pG~KD~~-ki~~fi~~~r 197 (203)
T 1v5x_A 133 ----------AYPRAWAKPLLA-TGRRVI--LAGGI-APENLEEVLALRPYALDLASGVEEAPGVKSAE-KLRALFARLA 197 (203)
T ss_dssp ----------CCCGGGGHHHHH-TTSCEE--ECSSC-CSTTHHHHHHHCCSEEEESGGGEEETTEECHH-HHHHHHHHHH
T ss_pred ----------ccCHHHHHhhhc-cCCcEE--EECCC-CHHHHHHHHhcCCCEEEeCCceecCCCCcCHH-HHHHHHHHHH
Confidence 223545544212 357998 58999 7999988887799999999999853 3765 4556888887
Q ss_pred ccC
Q 021575 274 HYS 276 (310)
Q Consensus 274 ~~~ 276 (310)
.+.
T Consensus 198 ~~~ 200 (203)
T 1v5x_A 198 SLR 200 (203)
T ss_dssp HTC
T ss_pred Hhh
Confidence 643
No 147
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.19 E-value=5.3e-06 Score=73.62 Aligned_cols=52 Identities=19% Similarity=0.367 Sum_probs=46.3
Q ss_pred CCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHH
Q 021575 207 AAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 207 ~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~ 262 (310)
...+++++++++..++|++ +.|||++++++.++++.|||+|++|++++. ||.
T Consensus 65 ~~~~~~i~~i~~~~~ipvi--~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~--dp~ 116 (247)
T 3tdn_A 65 GYDTEMIRFVRPLTTLPII--ASGGAGKMEHFLEAFLRGADKVSINTAAVE--NPS 116 (247)
T ss_dssp CCCHHHHHHHGGGCCSCEE--EESCCCSHHHHHHHHHTTCSEECCSHHHHH--CTH
T ss_pred cccHHHHHHHHHhCCCCEE--EeCCCCCHHHHHHHHHcCCCeeehhhHHhh--ChH
Confidence 3457889999988899998 689999999999999999999999999997 554
No 148
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=98.18 E-value=3.2e-05 Score=68.07 Aligned_cols=181 Identities=13% Similarity=0.163 Sum_probs=93.4
Q ss_pred ccCCCHHHHHHHHH-cC--CcEE-EeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCc-----HHHHHHH
Q 021575 40 MDVVTPEQARVAEE-AG--ACAV-MALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGH-----FVEAQIL 110 (310)
Q Consensus 40 ~~~~~~~~A~~~~~-~G--a~~i-~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~-----~~~a~~~ 110 (310)
.|+.+.+.+..+.+ .| ++++ +.+. . ...+| ++.++++++..+.++.....+.+ ...++.+
T Consensus 19 lD~~~~~~a~~~v~~~~~~v~~~Kvg~~-l---f~~~G-------~~~v~~l~~~~g~~v~lD~Kl~DipnTv~~~~~~~ 87 (228)
T 3m47_A 19 MDLMNRDDALRVTGEVREYIDTVKIGYP-L---VLSEG-------MDIIAEFRKRFGCRIIADFKVADIPETNEKICRAT 87 (228)
T ss_dssp CCCCSHHHHHHHHHTTTTTCSEEEEEHH-H---HHHHC-------THHHHHHHHHHCCEEEEEEEECSCHHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHHHcCCcccEEEEcHH-H---HHhcC-------HHHHHHHHhcCCCeEEEEEeecccHhHHHHHHHHH
Confidence 35566766666644 55 5666 3331 1 12233 57788887744556555433321 2246778
Q ss_pred HHcCCCEEEeCCCCCc---hhHHHHHHhcCCCCcEEEecCCHH-----------HHHHHHHhCCCEEEEcCCCCCcchHH
Q 021575 111 EAIGIDYVDESEVLTP---ADEENHINKHNFRIPFVCGCRNLG-----------EALRRIREGAAMIRTKGEAGTGNIIE 176 (310)
Q Consensus 111 ~~aGad~Vi~~~~~~~---~~~~~~i~~~~~~i~~~v~~~t~~-----------ea~~~~~~Gad~V~v~g~~~~~~~~~ 176 (310)
.++|+|.+..+..... ....+.+++.+.++.++.+..+.. -+..+.+.|.+.+.+..
T Consensus 88 ~~~gad~vtvh~~~G~~~l~~~~~~~~~~g~~v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~a--------- 158 (228)
T 3m47_A 88 FKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPS--------- 158 (228)
T ss_dssp HHTTCSEEEEESTTCHHHHHHHHHHHHHHTCEEEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEECCS---------
T ss_pred HhCCCCEEEEeccCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEECC---------
Confidence 8899999964332222 233333333333333333322211 01222334544433221
Q ss_pred HHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc-C-CCCEEEeCCCCCCCHH--HHHHHHHcCCCEEEEc
Q 021575 177 AVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL-G-RLPVVHFAAGGVATPA--DAAMMMQLGCDGVFVG 252 (310)
Q Consensus 177 ~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~-~-~iPVi~iA~GGI~t~~--d~~~~l~~GadgV~VG 252 (310)
...+.++.+++. . +.+++ ..||+ +. +. +++++|+|.+++|
T Consensus 159 -------------------------------t~~~e~~~ir~~~~~~~~iv---~PGI~-~~g~~p-~~~~aGad~iVvG 202 (228)
T 3m47_A 159 -------------------------------TRPERLSRLREIIGQDSFLI---SPGVG-AQGGDP-GETLRFADAIIVG 202 (228)
T ss_dssp -------------------------------SCHHHHHHHHHHHCSSSEEE---ECC-----------CGGGTCSEEEEC
T ss_pred -------------------------------CChHHHHHHHHhcCCCCEEE---ecCcC-cCCCCH-hHHHcCCCEEEEC
Confidence 011223444443 2 24554 47885 43 56 7789999999999
Q ss_pred cccccCCCHHHHHHHHHHHHhccC
Q 021575 253 SGVFKSGDPVKRAQAIVRAVTHYS 276 (310)
Q Consensus 253 sai~~a~dp~~~a~~l~~~i~~~~ 276 (310)
|+|++++||...++++.+.+++..
T Consensus 203 r~I~~a~dp~~a~~~~~~~~~~~~ 226 (228)
T 3m47_A 203 RSIYLADNPAAAAAGAIESIKDLL 226 (228)
T ss_dssp HHHHTSSCHHHHHHHHHHHC----
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHh
Confidence 999999999999999988876543
No 149
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=98.16 E-value=0.00011 Score=63.48 Aligned_cols=183 Identities=16% Similarity=0.140 Sum_probs=110.9
Q ss_pred CCCHHHHHHHHHcCCcEE-EeccCCcccccccCCCCCCCCHHHHHHHHhhcC-cceeeccccC-c-HHHHHHHHHcCCCE
Q 021575 42 VVTPEQARVAEEAGACAV-MALERVPADIRSQGGVARMSDPQLIKEIKQSVT-IPVMAKARIG-H-FVEAQILEAIGIDY 117 (310)
Q Consensus 42 ~~~~~~A~~~~~~Ga~~i-~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~-iPv~vk~~~~-~-~~~a~~~~~aGad~ 117 (310)
+++++.|+.+.++|||++ +... ..|.+.-+++..+++.+.+. .+..+..+.+ . .+..+.+.+.+.|.
T Consensus 9 it~~eda~~a~~~GaD~iGfif~---------~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~ 79 (205)
T 1nsj_A 9 ITNLEDALFSVESGADAVGFVFY---------PKSKRYISPEDARRISVELPPFVFRVGVFVNEEPEKILDVASYVQLNA 79 (205)
T ss_dssp CCSHHHHHHHHHHTCSEEEEECC---------TTCTTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHHTCSE
T ss_pred CCcHHHHHHHHHcCCCEEEEEec---------CCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCE
Confidence 688999999999999987 2221 12323345788888876542 2222333333 2 34456778899999
Q ss_pred EEeCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCC----CCCcchHHHHHHHHhhccceEeecc
Q 021575 118 VDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGE----AGTGNIIEAVRHVRSVMGDIRVLRN 193 (310)
Q Consensus 118 Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~----~~~~~~~~~~~~~r~~~~~~~~l~~ 193 (310)
|-.+...++..+ +.++. ...+.-.+.+.+..+...+.+..+|++-+... +++|.
T Consensus 80 vQLHG~e~~~~~-~~l~~-~~~vika~~v~~~~~l~~~~~~~~d~~LlD~~~~~~GGtG~-------------------- 137 (205)
T 1nsj_A 80 VQLHGEEPIELC-RKIAE-RILVIKAVGVSNERDMERALNYREFPILLDTKTPEYGGSGK-------------------- 137 (205)
T ss_dssp EEECSCCCHHHH-HHHHT-TSEEEEEEEESSHHHHHHHGGGTTSCEEEEESCSSSSSCCS--------------------
T ss_pred EEECCCCCHHHH-HHHhc-CCCEEEEEEcCCHHHHHHHHHcCCCEEEECCCCCCCCCCCC--------------------
Confidence 954444444433 33421 22333344566666665554455787765533 23331
Q ss_pred cChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHH-cCCCEEEEccccccC---CCHHHHHHHHH
Q 021575 194 MDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVGSGVFKS---GDPVKRAQAIV 269 (310)
Q Consensus 194 ~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~-~GadgV~VGsai~~a---~dp~~~a~~l~ 269 (310)
.-+|++++.+. ..+.|++ .+||+ +++++.++++ .+++||=|.|.+=.+ .|+. ..++|+
T Consensus 138 -------------~fdw~~l~~~~-~~~~p~~--LAGGL-~peNV~~ai~~~~p~gVDvsSGvE~~pG~KD~~-ki~~fi 199 (205)
T 1nsj_A 138 -------------TFDWSLILPYR-DRFRYLV--LSGGL-NPENVRSAIDVVRPFAVDVSSGVEAFPGKKDHD-SIKMFI 199 (205)
T ss_dssp -------------CCCGGGTGGGG-GGSSCEE--EESSC-CTTTHHHHHHHHCCSEEEESGGGEEETTEECHH-HHHHHH
T ss_pred -------------ccCHHHHHhhh-cCCCcEE--EECCC-CHHHHHHHHHhcCCCEEEECCceecCCCCcCHH-HHHHHH
Confidence 22344443331 1257998 57999 7999988875 699999999999853 3765 445577
Q ss_pred HHHh
Q 021575 270 RAVT 273 (310)
Q Consensus 270 ~~i~ 273 (310)
+.++
T Consensus 200 ~~~r 203 (205)
T 1nsj_A 200 KNAK 203 (205)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7665
No 150
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=98.09 E-value=1e-06 Score=82.56 Aligned_cols=77 Identities=16% Similarity=0.117 Sum_probs=63.3
Q ss_pred HHHHHHhhc-CCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhccCChhhhhhhhhhcc
Q 021575 211 DLVMQTKQL-GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLG 289 (310)
Q Consensus 211 ~~i~~i~~~-~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~~~~~~~~~~~~~~~ 289 (310)
+.+.++.+. .++||| +.|||.|++|+.+.+.+|||.|+|+|+++. .+|. ..+++.+.+.++++.+++.++++..|
T Consensus 266 ~~v~~~~~~~~~~pII--g~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~y-~GP~-~~~~I~~~L~~~L~~~G~~si~e~~G 341 (354)
T 3tjx_A 266 ANINAFYRRCPGKLIF--GCGGVYTGEDAFLHVLAGASMVQVGTALQE-EGPS-IFERLTSELLGVMAKKRYQTLDEFRG 341 (354)
T ss_dssp HHHHHHHHHCTTSEEE--EESSCCSHHHHHHHHHHTEEEEEECHHHHH-HCTT-HHHHHHHHHHHHHHHHTCCSGGGTTT
T ss_pred HHHHHHHHhcCCCcEE--EeCCcCCHHHHHHHHHcCCCEEEEChhhhh-cCch-HHHHHHHHHHHHHHHcCCCCHHHHhC
Confidence 345555443 468887 789999999999999999999999999753 2565 55669999999999999999999999
Q ss_pred cc
Q 021575 290 EA 291 (310)
Q Consensus 290 ~~ 291 (310)
..
T Consensus 342 ~~ 343 (354)
T 3tjx_A 342 KV 343 (354)
T ss_dssp CC
T ss_pred hh
Confidence 64
No 151
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=98.05 E-value=1.9e-05 Score=71.84 Aligned_cols=91 Identities=21% Similarity=0.249 Sum_probs=65.9
Q ss_pred hHHHHHHh-cCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhcc
Q 021575 128 DEENHINK-HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKI 206 (310)
Q Consensus 128 ~~~~~i~~-~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~ 206 (310)
+..+.+++ .++...+.++++|.++++.+.++|+|+|.+.+... +++
T Consensus 184 ~av~~ar~~~~~~~~IgVev~t~eea~eA~~aGaD~I~ld~~~~--------------------------~~~------- 230 (286)
T 1x1o_A 184 EAVRRAKARAPHYLKVEVEVRSLEELEEALEAGADLILLDNFPL--------------------------EAL------- 230 (286)
T ss_dssp HHHHHHHHHSCTTSCEEEEESSHHHHHHHHHHTCSEEEEESCCH--------------------------HHH-------
T ss_pred HHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCCH--------------------------HHH-------
Confidence 33444544 34457899999999999999999999999875311 000
Q ss_pred CCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 021575 207 AAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 207 ~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~ 259 (310)
.+.++.++ .++|+. ++||| +++++.++.++|+|++.+|+.+..++
T Consensus 231 ---k~av~~v~--~~ipi~--AsGGI-t~eni~~~a~tGvD~IsVgs~~~~a~ 275 (286)
T 1x1o_A 231 ---REAVRRVG--GRVPLE--ASGNM-TLERAKAAAEAGVDYVSVGALTHSAK 275 (286)
T ss_dssp ---HHHHHHHT--TSSCEE--EESSC-CHHHHHHHHHHTCSEEECTHHHHSCC
T ss_pred ---HHHHHHhC--CCCeEE--EEcCC-CHHHHHHHHHcCCCEEEEcHHHcCCC
Confidence 11222232 258998 67999 79999999999999999998777643
No 152
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.04 E-value=2e-05 Score=76.86 Aligned_cols=128 Identities=18% Similarity=0.213 Sum_probs=79.0
Q ss_pred HHHHHHHHcCCCEEEeC--CCCC--chhHHHHHHhcCCCCcEEEe-cCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHH
Q 021575 105 VEAQILEAIGIDYVDES--EVLT--PADEENHINKHNFRIPFVCG-CRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVR 179 (310)
Q Consensus 105 ~~a~~~~~aGad~Vi~~--~~~~--~~~~~~~i~~~~~~i~~~v~-~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~ 179 (310)
+.+..+.+.|+|.++.. .... ..+..+.+++. .++++++. +.+.+.+..+. |+|.|.+ |.+.+ .++. .
T Consensus 231 ~~a~~l~~~gvd~lvvdta~G~~~~~L~~I~~l~~~-~~vpvi~k~v~~~~~a~~l~--G~d~v~v-g~g~g-~~~~-~- 303 (486)
T 2cu0_A 231 KRAIELDKAGVDVIVVDTAHAHNLKAIKSMKEMRQK-VDADFIVGNIANPKAVDDLT--FADAVKV-GIGPG-SICT-T- 303 (486)
T ss_dssp HHHHHHHHTTCSEEEEECSCCCCHHHHHHHHHHHHT-CCSEEEEEEECCHHHHTTCT--TSSEEEE-CSSCS-TTBC-H-
T ss_pred HHHHHHHHhcCCceEEEecCCcEeehhhHHHHHHHH-hCCccccCCcCCHHHHHHhh--CCCeEEE-eeeec-ccee-e-
Confidence 56778889999987522 2221 22233444442 36676664 66888777766 9999998 43322 2111 0
Q ss_pred HHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 021575 180 HVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 180 ~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a 258 (310)
|. +...+.. ....+..+.++.+..++||| ++|||.+..|+.+++.+|||+|++|+.|+.+
T Consensus 304 --r~-------~~~~g~~--------~~~~l~~~~~~~~~~~vpVi--a~GGi~~~~di~kalalGA~~v~~g~~~~~~ 363 (486)
T 2cu0_A 304 --RI-------VAGVGVP--------QITAVAMVADRAQEYGLYVI--ADGGIRYSGDIVKAIAAGADAVMLGNLLAGT 363 (486)
T ss_dssp --HH-------HTCCCCC--------HHHHHHHHHHHHHHHTCEEE--EESCCCSHHHHHHHHHTTCSEEEESTTTTTB
T ss_pred --eE-------EeecCcc--------hHHHHHHHHHHHHHcCCcEE--ecCCCCCHHHHHHHHHcCCCceeeChhhhcC
Confidence 00 0000000 00112334444443478998 8899999999999999999999999999964
No 153
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=98.02 E-value=0.00011 Score=67.08 Aligned_cols=38 Identities=21% Similarity=0.349 Sum_probs=33.8
Q ss_pred HHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhc
Q 021575 237 DAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTH 274 (310)
Q Consensus 237 d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~ 274 (310)
++.+++++|+|.+++||+|++++||...++++.+.++.
T Consensus 215 t~~~a~~aGAd~iVvGr~I~~a~dp~~a~~~i~~~i~~ 252 (303)
T 3ru6_A 215 NLAMARENLSDYIVVGRPIYKNENPRAVCEKILNKIHR 252 (303)
T ss_dssp SHHHHHHTTCSEEEECHHHHTSSCHHHHHHHHHHHHC-
T ss_pred CHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHHh
Confidence 46677899999999999999999999999999998875
No 154
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=98.02 E-value=1.3e-05 Score=86.26 Aligned_cols=119 Identities=18% Similarity=0.177 Sum_probs=74.8
Q ss_pred cCCCEEEeC--CC-CCchh---HHHHHHhcCCCCcEEEe-c---CCHHHHHHHHHhCCCEEEEcCCC-CCcc-hHHHHHH
Q 021575 113 IGIDYVDES--EV-LTPAD---EENHINKHNFRIPFVCG-C---RNLGEALRRIREGAAMIRTKGEA-GTGN-IIEAVRH 180 (310)
Q Consensus 113 aGad~Vi~~--~~-~~~~~---~~~~i~~~~~~i~~~v~-~---~t~~ea~~~~~~Gad~V~v~g~~-~~~~-~~~~~~~ 180 (310)
.|++.+.-+ .+ .++.+ +++.++...++.++++- + ....+|..+.++|+|.|.+.|.. +++. +....
T Consensus 996 ~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~kAGAD~IvVsG~eGGTgasp~~~~-- 1073 (1520)
T 1ofd_A 996 PGVTLISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGTGASPLSSI-- 1073 (1520)
T ss_dssp TTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTSEEEEEEECSTTHHHHHHHHHHTTCSEEEEECTTCCCSSEEHHHH--
T ss_pred CCCCeeCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEecCCCChHHHHHHHHHcCCCEEEEeCCCCccCCCcchhh--
Confidence 677776411 12 23343 34444444345565544 2 24678888899999999998874 3321 10000
Q ss_pred HHhhccceEeecccChhHHHHhhhcc-CCcHHHHHHHhhc-------CCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEc
Q 021575 181 VRSVMGDIRVLRNMDDDEVFTFAKKI-AAPYDLVMQTKQL-------GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVG 252 (310)
Q Consensus 181 ~r~~~~~~~~l~~~~~d~~~~~~~~~-~~~~~~i~~i~~~-------~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VG 252 (310)
... .+....+.++.+. .++||+ ++|||++..|+.+++.+||++|.+|
T Consensus 1074 -----------------------~~~GlPt~~aL~ev~~al~~~glr~~IpVI--AdGGIrtG~DVakALaLGAdaV~iG 1128 (1520)
T 1ofd_A 1074 -----------------------KHAGSPWELGVTEVHRVLMENQLRDRVLLR--ADGGLKTGWDVVMAALMGAEEYGFG 1128 (1520)
T ss_dssp -----------------------HHBCCCHHHHHHHHHHHHHHTTCGGGCEEE--EESSCCSHHHHHHHHHTTCSEEECS
T ss_pred -----------------------cCCchhHHHHHHHHHHHHHhcCCCCCceEE--EECCCCCHHHHHHHHHcCCCeeEEc
Confidence 011 2223444444332 268998 7899999999999999999999999
Q ss_pred cccccC
Q 021575 253 SGVFKS 258 (310)
Q Consensus 253 sai~~a 258 (310)
++++.+
T Consensus 1129 TafL~a 1134 (1520)
T 1ofd_A 1129 SIAMIA 1134 (1520)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998663
No 155
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=97.99 E-value=0.00099 Score=58.45 Aligned_cols=185 Identities=22% Similarity=0.254 Sum_probs=106.6
Q ss_pred CCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceee-ccccCcHHHHHHHHHcCCCEEEe
Q 021575 42 VVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMA-KARIGHFVEAQILEAIGIDYVDE 120 (310)
Q Consensus 42 ~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~v-k~~~~~~~~a~~~~~aGad~Vi~ 120 (310)
+++++.++ +.++|||++ .+. ...+|.+.-+++..+++.+....|+.+ ....+..+.++.+.+.+.|.|-.
T Consensus 28 it~~ed~~-a~~~gaD~i-GfI-------f~~~SpR~V~~~~A~~i~~~~~~~~~~v~v~v~~~ei~~~i~~~~ld~vQL 98 (228)
T 4aaj_A 28 IKSLEELE-IVEKHADAT-GVV-------VNSNSKRRIPLEKAREIIENSAIPVFLVSTMVGFSEWAMAIERTGAQYIQV 98 (228)
T ss_dssp CCSHHHHH-HHHTTCSEE-EEE-------CSSSSTTBCCHHHHHHHHHHCSSCEEEEECCCCHHHHHHHHHHHTCSEEEE
T ss_pred CCcHHHHH-HHHcCCCEE-EEE-------ecCCCCCCCCHHHHHHHHHhhCCCCEEEeccCchHHHHHHHHhccchheec
Confidence 57788776 568899987 321 011233444578888887766666543 33333345567778899999854
Q ss_pred CCCCCchhHHHHHHhcCCCCcEEEecCC-----HHHHHH----HHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEee
Q 021575 121 SEVLTPADEENHINKHNFRIPFVCGCRN-----LGEALR----RIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVL 191 (310)
Q Consensus 121 ~~~~~~~~~~~~i~~~~~~i~~~v~~~t-----~~ea~~----~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l 191 (310)
....++..+..+-+..+..++-...+.+ .+++.+ .....+|++-+..++++|.
T Consensus 99 HG~E~~~~~~~l~~~~~~~viKa~~v~~~~~~~~~~~~~~~~~~~~~~~d~~LlDs~GGtG~------------------ 160 (228)
T 4aaj_A 99 HSNALPQTIDTLKKEFGVFVMKAFRVPTISKNPEEDANRLLSEISRYNADMVLLDTGAGSGK------------------ 160 (228)
T ss_dssp CSCCCHHHHHHHHHHHCCEEEEEEECCSSCSCHHHHHHHHHHHHHHSCCSEEEEEC------------------------
T ss_pred ccccCHHHHHHHhhccCceEEEEEEecccccchhhhHHHHHHHHhccCCCEEccCCCCCCcC------------------
Confidence 4444444443332222222221122221 122222 2344678876655444442
Q ss_pred cccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHH-cCCCEEEEccccccC--CCHHHHHHHH
Q 021575 192 RNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVGSGVFKS--GDPVKRAQAI 268 (310)
Q Consensus 192 ~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~-~GadgV~VGsai~~a--~dp~~~a~~l 268 (310)
.-+|++++.+.. +.|++ .+||+ +++++.++++ .++.||=|.|.+=.. .||. ..++|
T Consensus 161 ---------------~fDW~~~~~~~~--~~p~i--LAGGL-~peNV~~Ai~~~~P~gVDVsSGVEs~G~KD~~-KI~~F 219 (228)
T 4aaj_A 161 ---------------LHDLRVSSLVAR--KIPVI--VAGGL-NAENVEEVIKVVKPYGVDVSSGVEKYGIKDPK-LVEEF 219 (228)
T ss_dssp ----------------CCCHHHHHHHH--HSCEE--EESSC-CTTTHHHHHHHHCCSEEEESGGGEETTEECHH-HHHHH
T ss_pred ---------------cCChHHHHHhhh--cCCeE--EECCC-CHHHHHHHHHHhCCCEEEeCCCCCCCCCcCHH-HHHHH
Confidence 224566665543 36888 47999 7999999985 799999999999743 2664 44557
Q ss_pred HHHHhc
Q 021575 269 VRAVTH 274 (310)
Q Consensus 269 ~~~i~~ 274 (310)
++.+++
T Consensus 220 i~~vr~ 225 (228)
T 4aaj_A 220 VRRAKN 225 (228)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 777654
No 156
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=97.99 E-value=8.5e-06 Score=87.59 Aligned_cols=119 Identities=17% Similarity=0.136 Sum_probs=74.8
Q ss_pred cCCCEEEeC--CC-CCchhH---HHHHHhcCCCCcEEEec----CCHHHHHHHHHhCCCEEEEcCCC-CCcchHHHHHHH
Q 021575 113 IGIDYVDES--EV-LTPADE---ENHINKHNFRIPFVCGC----RNLGEALRRIREGAAMIRTKGEA-GTGNIIEAVRHV 181 (310)
Q Consensus 113 aGad~Vi~~--~~-~~~~~~---~~~i~~~~~~i~~~v~~----~t~~ea~~~~~~Gad~V~v~g~~-~~~~~~~~~~~~ 181 (310)
.|++.+.-. .+ .++.++ ++.+++..++.++++-. ....+|..+.++|+|.|.+.|.. +++..
T Consensus 961 ~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~~AGAD~IvVsG~eGGTgas------- 1033 (1479)
T 1ea0_A 961 PGVMLISPPPHHDIYSIEDLAQLIYDLKQINPDAKVTVKLVSRSGIGTIAAGVAKANADIILISGNSGGTGAS------- 1033 (1479)
T ss_dssp TTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTCEEEEEEECCTTHHHHHHHHHHTTCSEEEEECTTCCCSSE-------
T ss_pred CCCCccCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEEcCCCChHHHHHHHHHcCCcEEEEcCCCCCCCCC-------
Confidence 677776411 12 233433 44444433455654442 24678888899999999998874 33210
Q ss_pred HhhccceEeecccChhHHHHhhhccC-CcHHHHHHHhhc-------CCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcc
Q 021575 182 RSVMGDIRVLRNMDDDEVFTFAKKIA-APYDLVMQTKQL-------GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGS 253 (310)
Q Consensus 182 r~~~~~~~~l~~~~~d~~~~~~~~~~-~~~~~i~~i~~~-------~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGs 253 (310)
-+.. ....+ +....+.++.+. .++||+ ++|||++..|+.+++.+||++|.+|+
T Consensus 1034 --------p~~~---------~~~~G~Pt~~aL~ev~~al~~~glr~~VpVI--AdGGIrtG~DVakALaLGAdaV~iGT 1094 (1479)
T 1ea0_A 1034 --------PQTS---------IKFAGLPWEMGLSEVHQVLTLNRLRHRVRLR--TDGGLKTGRDIVIAAMLGAEEFGIGT 1094 (1479)
T ss_dssp --------ETTH---------HHHSCCCHHHHHHHHHHHHHTTTCTTTSEEE--EESSCCSHHHHHHHHHTTCSEEECCH
T ss_pred --------chhh---------hcCCchhHHHHHHHHHHHHHHcCCCCCceEE--EECCCCCHHHHHHHHHcCCCeeeEcH
Confidence 0000 00112 223445444442 269998 78999999999999999999999999
Q ss_pred cccc
Q 021575 254 GVFK 257 (310)
Q Consensus 254 ai~~ 257 (310)
+++.
T Consensus 1095 afL~ 1098 (1479)
T 1ea0_A 1095 ASLI 1098 (1479)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9965
No 157
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=97.99 E-value=2.9e-05 Score=69.89 Aligned_cols=48 Identities=15% Similarity=0.152 Sum_probs=43.5
Q ss_pred CcHHHHHHHhhcC--CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 021575 208 APYDLVMQTKQLG--RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 208 ~~~~~i~~i~~~~--~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~ 257 (310)
...+.++++++.. ++|++ .+|||+|++++.+++++|||+|+|||++++
T Consensus 212 v~~e~V~~I~~~~~~~iPV~--vGGGIrs~Eda~~ll~aGAD~VVVGSAav~ 261 (286)
T 3vk5_A 212 VPPEVVRHFRKGLGPDQVLF--VSGNVRSGRQVTEYLDSGADYVGFAGALEQ 261 (286)
T ss_dssp CCHHHHHHHHHHSCTTCEEE--EESSCCSHHHHHHHHHTTCSEEEESGGGSS
T ss_pred CCHHHHHHHHHhcCCCCCEE--EEeCCCCHHHHHHHHHcCCCEEEECchhhc
Confidence 3467888888877 89998 689999999999999999999999999997
No 158
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=97.96 E-value=0.00018 Score=62.94 Aligned_cols=151 Identities=9% Similarity=0.103 Sum_probs=88.6
Q ss_pred HHHHHHHHhhcCc-ceeeccccCcH-HHHHHHHHcCC--CEEEeCCCCC----chhHHHHHHhcCCCCcEEEecCC----
Q 021575 81 PQLIKEIKQSVTI-PVMAKARIGHF-VEAQILEAIGI--DYVDESEVLT----PADEENHINKHNFRIPFVCGCRN---- 148 (310)
Q Consensus 81 ~~~i~~i~~~~~i-Pv~vk~~~~~~-~~a~~~~~aGa--d~Vi~~~~~~----~~~~~~~i~~~~~~i~~~v~~~t---- 148 (310)
++.++++++..+. +++....+.+. ..+..+.+.-+ |.+..+.... ...+.+..++.+.++.++.+..+
T Consensus 41 ~~~v~~L~~~~~~~~VflDlK~~DI~nTv~~~~~~~~~~d~vTVh~~~G~~~~~~~a~~~~~~~~~~v~vLts~s~~~~~ 120 (222)
T 4dbe_A 41 VDKTRELLIGLDVEEIIVDFKLADIGYIMKSIVERLSFANSFIAHSFIGVKGSLDELKRYLDANSKNLYLVAVMSHEGWS 120 (222)
T ss_dssp HHHHHHHHHTCCCSEEEEEEEECSCHHHHHHHHTTCTTCSEEEEESTTCTTTTHHHHHHHHHHTTCEEEEEEECSSTTCC
T ss_pred HHHHHHHHHhcCCCeEEEEeeecchHHHHHHHHHHHHhCCEEEEEcCcCcHHHHHHHHHHHHhcCCcEEEEEeCCCcchH
Confidence 6778888775578 88887655431 23333333222 8875332222 33444444333334444444433
Q ss_pred ----HHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc-CCCC
Q 021575 149 ----LGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL-GRLP 223 (310)
Q Consensus 149 ----~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~-~~iP 223 (310)
..-+..+.+.|++.+.+.+. .+ +.++.+++. .+ .
T Consensus 121 ~~~~~~~a~~a~~~g~~GvV~sat---------------------------------------~p-~e~~~ir~~~~~-~ 159 (222)
T 4dbe_A 121 TLFADYIKNVIREISPKGIVVGGT---------------------------------------KL-DHITQYRRDFEK-M 159 (222)
T ss_dssp CTTHHHHHHHHHHHCCSEEEECTT---------------------------------------CH-HHHHHHHHHCTT-C
T ss_pred HHHHHHHHHHHHHhCCCEEEECCC---------------------------------------CH-HHHHHHHHhCCC-C
Confidence 23344455678776654321 01 123334432 23 3
Q ss_pred EEEeCCCCCCCHH--HHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhcc
Q 021575 224 VVHFAAGGVATPA--DAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHY 275 (310)
Q Consensus 224 Vi~iA~GGI~t~~--d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~ 275 (310)
++ ...||+ +. +..++++.|+|.++|||+|++++||...++++.+.++++
T Consensus 160 ~~--vtPGI~-~~g~tp~~a~~~Gad~iVVGR~I~~A~dP~~aa~~i~~~i~~~ 210 (222)
T 4dbe_A 160 TI--VSPGMG-SQGGSYGDAVCAGADYEIIGRSIYNAGNPLTALRTINKIIEDK 210 (222)
T ss_dssp EE--EECCBS-TTSBCTTHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHHHHH
T ss_pred EE--EcCCcc-cCccCHHHHHHcCCCEEEECHHhcCCCCHHHHHHHHHHHHHHH
Confidence 33 257885 33 566678899999999999999999999999999988754
No 159
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=97.94 E-value=0.00018 Score=61.42 Aligned_cols=165 Identities=16% Similarity=0.133 Sum_probs=94.8
Q ss_pred CcccccCCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeecccc---CcHHHH-HHHH
Q 021575 36 GGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARI---GHFVEA-QILE 111 (310)
Q Consensus 36 ~g~i~~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~---~~~~~a-~~~~ 111 (310)
...|..+.+.+..+.+.+..+..++.|+ | ......+.+++++++...+++--+.+ +..+.+ +-+.
T Consensus 10 ~piI~Avr~~~~l~~al~s~~~~ifll~----------g-~i~~l~~~v~~lk~~~K~v~Vh~Dli~Gls~d~~ai~fL~ 78 (192)
T 3kts_A 10 QSIIPAAHNQKDMEKILELDLTYMVMLE----------T-HVAQLKALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLC 78 (192)
T ss_dssp CCEEEEESSSHHHHHHTTSSCCEEEECS----------E-ETTTHHHHHHHHHHTTCEEEEEGGGEETCCCSHHHHHHHH
T ss_pred CCEEEEecCHHHHHHHHcCCCCEEEEec----------C-cHHHHHHHHHHHHHcCCeEEEecCchhccCCcHHHHHHHH
Confidence 4556667777777777777777765552 1 11223567778887776555533322 222333 3233
Q ss_pred H-cCCCEEEeCCCCCchhHHHHHHhcCCC-C--cEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccc
Q 021575 112 A-IGIDYVDESEVLTPADEENHINKHNFR-I--PFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGD 187 (310)
Q Consensus 112 ~-aGad~Vi~~~~~~~~~~~~~i~~~~~~-i--~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~ 187 (310)
+ .++|+++.+.. ...+..++.+.. + .+++|..+.+ +.++.+++...+
T Consensus 79 ~~~~pdGIIsTk~----~~i~~Ak~~gL~tIqR~FliDS~al~-------------------------~~~~~i~~~~PD 129 (192)
T 3kts_A 79 TEICPDGIISTRG----NAIMKAKQHKMLAIQRLFMIDSSAYN-------------------------KGVALIQKVQPD 129 (192)
T ss_dssp HTTCCSEEEESCH----HHHHHHHHTTCEEEEEEECCSHHHHH-------------------------HHHHHHHHHCCS
T ss_pred hCCCCCEEEeCcH----HHHHHHHHCCCeEEEEEEEEEcchHH-------------------------HHHHHHhhcCCC
Confidence 3 58888875542 233344333321 1 1112222212 223333222222
Q ss_pred -eEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccc
Q 021575 188 -IRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVF 256 (310)
Q Consensus 188 -~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~ 256 (310)
+.++|. ...+.++++++..++|++ |+|+|++.+|+.+++++||++|..++.-+
T Consensus 130 ~iEiLPG--------------i~p~iI~~i~~~~~~PiI--aGGlI~~~edv~~al~aGA~aVsTs~~~L 183 (192)
T 3kts_A 130 CIELLPG--------------IIPEQVQKMTQKLHIPVI--AGGLIETSEQVNQVIASGAIAVTTSNKHL 183 (192)
T ss_dssp EEEEECT--------------TCHHHHHHHHHHHCCCEE--EESSCCSHHHHHHHHTTTEEEEEECCGGG
T ss_pred EEEECCc--------------hhHHHHHHHHHhcCCCEE--EECCcCCHHHHHHHHHcCCeEEEeCCHHH
Confidence 222221 113578888888899998 89999999999999999999999987644
No 160
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=97.94 E-value=6.7e-05 Score=65.42 Aligned_cols=60 Identities=27% Similarity=0.418 Sum_probs=47.2
Q ss_pred HHHHhhc-CCCCEEEeCCCCCCCHH--HHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhccC
Q 021575 213 VMQTKQL-GRLPVVHFAAGGVATPA--DAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHYS 276 (310)
Q Consensus 213 i~~i~~~-~~iPVi~iA~GGI~t~~--d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~~ 276 (310)
++.+++. .+ .++ ..+||+ ++ +..++++.|+|.+++||+|++++||...++++.+.++++.
T Consensus 142 ~~~ir~~~~~-f~~--v~pGI~-~~g~~~~~a~~~Gad~iVvGr~I~~a~dp~~a~~~i~~~i~~~~ 204 (215)
T 3ve9_A 142 ISRVKGDFPD-KLV--ISPGVG-TQGAKPGIALCHGADYEIVGRSVYQSADPVRKLEEIVRSQEEVL 204 (215)
T ss_dssp HHHHHHHCTT-SEE--EECCTT-STTCCTTHHHHTTCSEEEECHHHHTSSSHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhCCC-cEE--EcCCCC-cCcCCHHHHHHcCCCEEEeCHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 3445443 34 454 369996 55 6778889999999999999999999999999999887654
No 161
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=97.87 E-value=0.0001 Score=66.00 Aligned_cols=40 Identities=20% Similarity=0.277 Sum_probs=36.2
Q ss_pred HHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhccCC
Q 021575 238 AAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHYSD 277 (310)
Q Consensus 238 ~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~~~ 277 (310)
..++.++|+|.+++||+|++++||...++++++.++.+..
T Consensus 202 ~~~a~~aGad~iVvGr~I~~a~dp~~a~~~i~~~~~~~~~ 241 (259)
T 3tfx_A 202 PKMAKEWGSSAIVVGRPITLASDPKAAYEAIKKEFNAENL 241 (259)
T ss_dssp HHHHHHTTCSEEEECHHHHTSSSHHHHHHHHHHHHTCTTC
T ss_pred HHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 7778899999999999999999999999999999887654
No 162
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=97.84 E-value=7.4e-05 Score=67.59 Aligned_cols=40 Identities=23% Similarity=0.305 Sum_probs=30.2
Q ss_pred HHHHHHhh--cCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEc
Q 021575 211 DLVMQTKQ--LGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVG 252 (310)
Q Consensus 211 ~~i~~i~~--~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VG 252 (310)
.+++++.+ ..++||. ++|||++.+|+.+++++||+-+-..
T Consensus 222 ~lmr~~v~~~g~~v~VK--AAGGIrt~edAl~mi~aGA~RiGtS 263 (288)
T 3oa3_A 222 SLMSAVCDSLQSETRVK--ASGGIRTIEDCVKMVRAGAERLGAS 263 (288)
T ss_dssp HHHHHHHHHSSSCCEEE--EESSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHhCCCceEE--EeCCCCCHHHHHHHHHcCCceeehh
Confidence 34444442 2468898 7999999999999999999955433
No 163
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=97.84 E-value=3.1e-05 Score=70.02 Aligned_cols=94 Identities=15% Similarity=0.195 Sum_probs=66.8
Q ss_pred hhHHHHHHhcCCC-CcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhc
Q 021575 127 ADEENHINKHNFR-IPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKK 205 (310)
Q Consensus 127 ~~~~~~i~~~~~~-i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~ 205 (310)
.+..+.+++..+. ..+.+++.|.+++..+.+.|+|+|.+.... + +.+
T Consensus 169 ~~ai~~~r~~~~~~~~i~vev~tlee~~~A~~aGaD~I~ld~~~----~----------------------~~l------ 216 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEIECESFEEAKNAMNAGADIVMCDNLS----V----------------------LET------ 216 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEEEESSHHHHHHHHHHTCSEEEEETCC----H----------------------HHH------
T ss_pred HHHHHHHHHhCCCCceEEEEcCCHHHHHHHHHcCCCEEEECCCC----H----------------------HHH------
Confidence 3445555553333 678999999999999999999999986421 0 000
Q ss_pred cCCcHHHHHHHh-hcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 021575 206 IAAPYDLVMQTK-QLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 206 ~~~~~~~i~~i~-~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~ 259 (310)
.+..+.+. ...++|+. ++||| +++++.++.++|+|++.+|+.++.++
T Consensus 217 ----~~~v~~l~~~~~~~~i~--AsGGI-~~~ni~~~~~aGaD~i~vGs~i~~a~ 264 (273)
T 2b7n_A 217 ----KEIAAYRDAHYPFVLLE--ASGNI-SLESINAYAKSGVDAISVGALIHQAT 264 (273)
T ss_dssp ----HHHHHHHHHHCTTCEEE--EESSC-CTTTHHHHHTTTCSEEECTHHHHTCC
T ss_pred ----HHHHHHhhccCCCcEEE--EECCC-CHHHHHHHHHcCCcEEEEcHHhcCCC
Confidence 01122222 22457888 78999 89999999999999999999988643
No 164
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=97.82 E-value=2.3e-05 Score=71.19 Aligned_cols=94 Identities=18% Similarity=0.184 Sum_probs=67.7
Q ss_pred hhHHHHHHhcCCC-CcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhc
Q 021575 127 ADEENHINKHNFR-IPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKK 205 (310)
Q Consensus 127 ~~~~~~i~~~~~~-i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~ 205 (310)
....+.+++..+. ..+.+++.|.+++..+.++|+|+|.+.+.. ++++
T Consensus 180 ~~av~~ar~~~~~~~~I~VEV~tleea~eA~~aGaD~I~LDn~~--------------------------~e~l------ 227 (285)
T 1o4u_A 180 ERAVQEVRKIIPFTTKIEVEVENLEDALRAVEAGADIVMLDNLS--------------------------PEEV------ 227 (285)
T ss_dssp HHHHHHHHTTSCTTSCEEEEESSHHHHHHHHHTTCSEEEEESCC--------------------------HHHH------
T ss_pred HHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCCEEEECCCC--------------------------HHHH------
Confidence 3445555554333 789999999999999999999999887531 1111
Q ss_pred cCCcHHHHHHHhh-cCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 021575 206 IAAPYDLVMQTKQ-LGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 206 ~~~~~~~i~~i~~-~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~ 259 (310)
.+.++.++. ..++|+. ++||| +++++.++.++|+|++.+|+.+..++
T Consensus 228 ----~~av~~l~~~~~~v~ie--ASGGI-t~eni~~~a~tGVD~IsvGslt~sa~ 275 (285)
T 1o4u_A 228 ----KDISRRIKDINPNVIVE--VSGGI-TEENVSLYDFETVDVISSSRLTLQEV 275 (285)
T ss_dssp ----HHHHHHHHHHCTTSEEE--EEECC-CTTTGGGGCCTTCCEEEEGGGTSSCC
T ss_pred ----HHHHHHhhccCCCceEE--EECCC-CHHHHHHHHHcCCCEEEEeHHHcCCC
Confidence 112222322 1257887 78999 79999999999999999999888754
No 165
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=97.82 E-value=4.4e-05 Score=68.13 Aligned_cols=29 Identities=34% Similarity=0.479 Sum_probs=25.3
Q ss_pred CCCCEEEeCCCCCCCHHHHHHHHHcCCCEEE
Q 021575 220 GRLPVVHFAAGGVATPADAAMMMQLGCDGVF 250 (310)
Q Consensus 220 ~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~ 250 (310)
.++||- ++|||+|.+|+.+++++||+-+-
T Consensus 215 ~~v~VK--aAGGIrt~~~al~mi~aGA~RiG 243 (260)
T 3r12_A 215 DEMGVK--ASGGIRTFEDAVKMIMYGADRIG 243 (260)
T ss_dssp TTSEEE--EESSCCSHHHHHHHHHTTCSEEE
T ss_pred CCceEE--EeCCCCCHHHHHHHHHcCCceee
Confidence 468888 78999999999999999999443
No 166
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=97.77 E-value=7.8e-05 Score=65.21 Aligned_cols=36 Identities=33% Similarity=0.520 Sum_probs=30.0
Q ss_pred CCCCEEEeCCCCCCCHHHHHHHHHcCCC--EEEEcccccc
Q 021575 220 GRLPVVHFAAGGVATPADAAMMMQLGCD--GVFVGSGVFK 257 (310)
Q Consensus 220 ~~iPVi~iA~GGI~t~~d~~~~l~~Gad--gV~VGsai~~ 257 (310)
.++||. ++|||++.+|+.+++++||+ |+..|..|++
T Consensus 175 ~~v~Vk--aaGGirt~~~al~~i~aGa~RiG~S~g~~I~~ 212 (220)
T 1ub3_A 175 GRAQVK--AAGGIRDRETALRMLKAGASRLGTSSGVALVA 212 (220)
T ss_dssp TSSEEE--EESSCCSHHHHHHHHHTTCSEEEETTHHHHHC
T ss_pred CCCeEE--EECCCCCHHHHHHHHHCCCcccchhHHHHHHH
Confidence 578998 78999999999999999999 6665555554
No 167
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=97.75 E-value=4e-05 Score=68.10 Aligned_cols=60 Identities=22% Similarity=0.304 Sum_probs=46.7
Q ss_pred HHHHHHHhhcC-CCCEEEeCCCCCCCHH-----------HHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHh
Q 021575 210 YDLVMQTKQLG-RLPVVHFAAGGVATPA-----------DAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVT 273 (310)
Q Consensus 210 ~~~i~~i~~~~-~iPVi~iA~GGI~t~~-----------d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~ 273 (310)
.+ ++++++.. +.++. ..|||+ ++ ++.+++++|+|.+++||+|++++||...++++++.++
T Consensus 171 ~e-i~~lr~~~~~~~i~--v~gGI~-~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a~dp~~a~~~l~~~i~ 242 (245)
T 1eix_A 171 QE-AVRFKQVFGQEFKL--VTPGIR-PQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASLQ 242 (245)
T ss_dssp GG-HHHHHHHHCSSSEE--EECCBC-CTTCCCTTCCSCBCHHHHHHTTCSEEEECHHHHTSSSHHHHHHHHHHHTC
T ss_pred HH-HHHHHHhcCCCCEE--EECCcC-CCCCCccchhccCCHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHHHHH
Confidence 44 55555432 35666 369995 56 6888899999999999999999999999998887664
No 168
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=97.74 E-value=0.00015 Score=66.14 Aligned_cols=89 Identities=18% Similarity=0.168 Sum_probs=64.1
Q ss_pred hhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhcc
Q 021575 127 ADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKI 206 (310)
Q Consensus 127 ~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~ 206 (310)
.+..+.+++..+...+.+++.|.+++..+.++|+|+|.+.+..
T Consensus 196 ~~ai~~~r~~~~~~kI~vev~tlee~~eA~~aGaD~I~ld~~~------------------------------------- 238 (296)
T 1qap_A 196 RQAVEKAFWLHPDVPVEVEVENLDELDDALKAGADIIMLDNFN------------------------------------- 238 (296)
T ss_dssp HHHHHHHHHHSTTSCEEEEESSHHHHHHHHHTTCSEEEESSCC-------------------------------------
T ss_pred HHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHcCCCEEEECCCC-------------------------------------
Confidence 3344444443333478889999999999999999999986421
Q ss_pred CCcHHHHHHHhhc--CCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 021575 207 AAPYDLVMQTKQL--GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 207 ~~~~~~i~~i~~~--~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a 258 (310)
.+.++++.+. .++|+. ++||| +++++.++.++|+|++.+|+.+..+
T Consensus 239 ---~e~l~~~v~~~~~~~~I~--ASGGI-t~~~i~~~a~~GvD~isvGsli~~a 286 (296)
T 1qap_A 239 ---TDQMREAVKRVNGQARLE--VSGNV-TAETLREFAETGVDFISVGALTKHV 286 (296)
T ss_dssp ---HHHHHHHHHTTCTTCCEE--ECCCS-CHHHHHHHHHTTCSEEECSHHHHEE
T ss_pred ---HHHHHHHHHHhCCCCeEE--EECCC-CHHHHHHHHHcCCCEEEEeHHHcCC
Confidence 1112222222 257887 79999 8999999999999999999977653
No 169
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=97.73 E-value=8.2e-05 Score=65.81 Aligned_cols=59 Identities=19% Similarity=0.324 Sum_probs=47.5
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHH
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAV 272 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i 272 (310)
.++.++++++..++|++ ..|||.+++++.+++++|||+|++|++.+. +|.... ++.+.+
T Consensus 62 ~~~~i~~i~~~~~ipvi--~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~--~p~~~~-~~~~~~ 120 (253)
T 1thf_D 62 MLELVEKVAEQIDIPFT--VGGGIHDFETASELILRGADKVSINTAAVE--NPSLIT-QIAQTF 120 (253)
T ss_dssp HHHHHHHHHTTCCSCEE--EESSCCSHHHHHHHHHTTCSEEEESHHHHH--CTHHHH-HHHHHH
T ss_pred cHHHHHHHHHhCCCCEE--EeCCCCCHHHHHHHHHcCCCEEEEChHHHh--ChHHHH-HHHHHc
Confidence 35678888887899998 579999999999999999999999999997 564333 344443
No 170
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=97.73 E-value=0.002 Score=61.99 Aligned_cols=232 Identities=20% Similarity=0.221 Sum_probs=138.8
Q ss_pred cchhhhhhCcccccCCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhc--CcceeeccccCcHH
Q 021575 28 VGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSV--TIPVMAKARIGHFV 105 (310)
Q Consensus 28 ~~~~~~~~~g~i~~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~--~iPv~vk~~~~~~~ 105 (310)
...+..+.--.+.++.+.+.+.++.+.|++.| ..|. |...+ +..+++...++.+.. +++++.--++...+
T Consensus 150 ~~~a~~lgm~~LvEvh~~eE~~~A~~lga~iI-Ginn-----r~L~t--~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~e 221 (452)
T 1pii_A 150 AAVAHSLEMGVLTEVSNEEEQERAIALGAKVV-GINN-----RDLRD--LSIDLNRTRELAPKLGHNVTVISESGINTYA 221 (452)
T ss_dssp HHHHHHTTCEEEEEECSHHHHHHHHHTTCSEE-EEES-----EETTT--TEECTHHHHHHHHHHCTTSEEEEESCCCCHH
T ss_pred HHHHHHcCCeEEEEeCCHHHHHHHHHCCCCEE-EEeC-----CCCCC--CCCCHHHHHHHHHhCCCCCeEEEECCCCCHH
Confidence 34455554456889999999999999999965 5541 11111 122356666665554 66777777776778
Q ss_pred HHHHHHHcCCCEEE-eCCCCCchhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcc---hHHHHHHH
Q 021575 106 EAQILEAIGIDYVD-ESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGN---IIEAVRHV 181 (310)
Q Consensus 106 ~a~~~~~aGad~Vi-~~~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~---~~~~~~~~ 181 (310)
+++.+.++ +|+|+ ++..+.+.+....++..-.+..=+++.++.+++..+.++|+|+++..-...++. +.++.+.+
T Consensus 222 dv~~~~~~-a~avLVGealmr~~d~~~~~~~l~~~~~KICGit~~eda~~a~~~Gad~iGfIf~~~SpR~V~~~~a~~i~ 300 (452)
T 1pii_A 222 QVRELSHF-ANGFLIGSALMAHDDLHAAVRRVLLGENKVCGLTRGQDAKAAYDAGAIYGGLIFVATSPRCVNVEQAQEVM 300 (452)
T ss_dssp HHHHHTTT-CSEEEECHHHHTCSCHHHHHHHHHHCSCEECCCCSHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHH
T ss_pred HHHHHHHh-CCEEEEcHHHcCCcCHHHHHHHHHHHhccccCCCcHHHHHHHHhcCCCEEEeecCCCCCCCCCHHHHHHHH
Confidence 99999999 99997 333333333333333311234456788999999999999999998553322222 12222222
Q ss_pred Hhhc-cceEeecccChhHHHHhhh--------------------------------------------------------
Q 021575 182 RSVM-GDIRVLRNMDDDEVFTFAK-------------------------------------------------------- 204 (310)
Q Consensus 182 r~~~-~~~~~l~~~~~d~~~~~~~-------------------------------------------------------- 204 (310)
+... ..+.+|-+.+.+.+.+.+.
T Consensus 301 ~~~~v~~VgVFvn~~~~~i~~~~~~~~ld~vQLHG~E~~~~~~~l~~~~p~~~~iika~~v~~~~~~~~~~~~d~~LlD~ 380 (452)
T 1pii_A 301 AAAPLQYVGVFRNHDIADVVDKAKVLSLAAVQLHGNEEQLYIDTLREALPAHVAIWKALSVGETLPAREFQHVDKYVLDN 380 (452)
T ss_dssp HHCCCEEEEEESSCCHHHHHHHHHHHTCSEEEECSCCCHHHHHHHHHHSCTTSEEEEEEECSSSCCCCCCTTCCEEEEES
T ss_pred hcCCCCEEEEEeCCCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHhhccCCCcEEEEEecCCccchhhhhcccEEEecC
Confidence 2211 1144444444333332100
Q ss_pred ---ccCC--cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccC---CCHHHHHHHHHHHHhcc
Q 021575 205 ---KIAA--PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS---GDPVKRAQAIVRAVTHY 275 (310)
Q Consensus 205 ---~~~~--~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a---~dp~~~a~~l~~~i~~~ 275 (310)
+.+. +|.+ +....+.|++ .+||+ +++++.++++.++.||=|.|.+=.+ +|+.+ .++|++.++.|
T Consensus 381 ~~GGtG~~fdW~~---l~~~~~~p~i--LAGGL-~p~NV~~ai~~~p~gvDvsSGVE~~pG~KD~~k-i~~f~~~~r~~ 452 (452)
T 1pii_A 381 GQGGSGQRFDWSL---LNGQSLGNVL--LAGGL-GADNCVEAAQTGCAGLDFNSAVESQPGIKDARL-LASVFQTLRAY 452 (452)
T ss_dssp CSCCSSCCCCGGG---GTTSCCTTEE--EESSC-CTTTHHHHHTTCCSEEEECGGGEEETTEECHHH-HHHHHHHHHCC
T ss_pred CCCCCCCccCHHH---hhcccCCcEE--EEcCC-CHHHHHHHHhcCCCEEEeCCceeCCCCCCCHHH-HHHHHHHHhhC
Confidence 0000 1222 1222246888 47999 7999998888999999999999754 37654 44577777643
No 171
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=97.73 E-value=0.00023 Score=66.70 Aligned_cols=46 Identities=20% Similarity=0.250 Sum_probs=37.1
Q ss_pred HHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHH
Q 021575 212 LVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 212 ~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~~a~dp~ 262 (310)
+.+.+++..+.|++ .||+.+++++.++++.| ||.|.+|++++. ||.
T Consensus 277 ~a~~ik~~~~~~v~---~~g~~~~~~ae~~l~~G~aD~V~~gR~~la--dPd 323 (358)
T 4a3u_A 277 LSPEIRKVFKPPLV---LNQDYTFETAQAALDSGVADAISFGRPFIG--NPD 323 (358)
T ss_dssp CHHHHHHHCCSCEE---EESSCCHHHHHHHHHHTSCSEEEESHHHHH--CTT
T ss_pred HHHHHHHhcCCcEE---EeCCCCHHHHHHHHHcCCceEeHhhHHHHh--Chh
Confidence 34456666677876 37778999999999988 999999999998 665
No 172
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=97.71 E-value=0.00014 Score=63.16 Aligned_cols=55 Identities=11% Similarity=0.111 Sum_probs=38.7
Q ss_pred HHHHhhcCCCCEEEeCCCCCCCHHH----------HHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHH
Q 021575 213 VMQTKQLGRLPVVHFAAGGVATPAD----------AAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAV 272 (310)
Q Consensus 213 i~~i~~~~~iPVi~iA~GGI~t~~d----------~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i 272 (310)
++.+++....|++ .+||+ +.. ..+ +++|+|++++||+|++++||...++++.+.+
T Consensus 148 ~~~ir~~~~~~~v---~pGI~-~~~~~~dq~rv~t~~~-i~aGad~iVvGR~I~~a~dP~~aa~~i~~~i 212 (213)
T 1vqt_A 148 AKALREKIKGKIL---VPGIR-MEVKADDQKDVVTLEE-MKGIANFAVLGREIYLSENPREKIKRIKEMR 212 (213)
T ss_dssp HHHHTTTCCSCEE---ECCBC----------CCBCHHH-HTTTCSEEEESHHHHTSSCHHHHHHHHTC--
T ss_pred HHHHHHHCCCCEE---ECCCC-CCCCccchhhcCCHHH-HHCCCCEEEEChhhcCCCCHHHHHHHHHHHh
Confidence 4445554444633 47885 433 577 8999999999999999999999988876543
No 173
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.71 E-value=8.7e-05 Score=65.59 Aligned_cols=49 Identities=29% Similarity=0.439 Sum_probs=43.7
Q ss_pred HHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHH
Q 021575 210 YDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 210 ~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~ 262 (310)
++.++++++..++|++ +.|||++++++.+++++|||+|++|+.++. +|.
T Consensus 64 ~~~i~~i~~~~~iPvi--~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~--~p~ 112 (252)
T 1ka9_F 64 LDVVARVAERVFIPLT--VGGGVRSLEDARKLLLSGADKVSVNSAAVR--RPE 112 (252)
T ss_dssp HHHHHHHHTTCCSCEE--EESSCCSHHHHHHHHHHTCSEEEECHHHHH--CTH
T ss_pred HHHHHHHHHhCCCCEE--EECCcCCHHHHHHHHHcCCCEEEEChHHHh--CcH
Confidence 5678888888899999 579999999999999999999999999996 564
No 174
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=97.70 E-value=0.00012 Score=64.54 Aligned_cols=32 Identities=31% Similarity=0.371 Sum_probs=26.7
Q ss_pred CCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcc
Q 021575 220 GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGS 253 (310)
Q Consensus 220 ~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGs 253 (310)
.+++|. ++|||+|.+|+.+++++||+-+-..+
T Consensus 199 ~~v~VK--asGGIrt~~da~~~i~aGA~riGtS~ 230 (239)
T 3ngj_A 199 DKALVK--AAGGIRTFDDAMKMINNGASRIGASA 230 (239)
T ss_dssp GGSEEE--EESSCCSHHHHHHHHHTTEEEEEESC
T ss_pred CCceEE--EeCCCCCHHHHHHHHHhcccceeccc
Confidence 367888 79999999999999999999554443
No 175
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.69 E-value=0.00015 Score=64.62 Aligned_cols=54 Identities=19% Similarity=0.261 Sum_probs=43.3
Q ss_pred CCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccc-cCCCHH
Q 021575 207 AAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVF-KSGDPV 262 (310)
Q Consensus 207 ~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~-~a~dp~ 262 (310)
+..++.++++++..++|++ +.|||++++++.+++++|||+|++|++++ ...+|.
T Consensus 60 g~~~~~i~~i~~~~~iPvi--~~ggi~~~~~i~~~~~~Gad~v~lg~~~~~~~~~~~ 114 (266)
T 2w6r_A 60 GYDTEMIRFVRPLTTLPII--ASGGAGKMEHFLEAFLAGADKALAASVFHFREIDMR 114 (266)
T ss_dssp CCCHHHHHHHGGGCCSCEE--EESCCCSTHHHHHHHHHTCSEEECCCCC------CH
T ss_pred cccHHHHHHHHHhcCCCEE--EECCCCCHHHHHHHHHcCCcHhhhhHHHHhCCCCHH
Confidence 3457888889888899998 57999999999999999999999999999 322554
No 176
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=97.66 E-value=5.9e-05 Score=66.34 Aligned_cols=29 Identities=38% Similarity=0.512 Sum_probs=25.3
Q ss_pred CCCCEEEeCCCCCCCHHHHHHHHHcCCCEEE
Q 021575 220 GRLPVVHFAAGGVATPADAAMMMQLGCDGVF 250 (310)
Q Consensus 220 ~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~ 250 (310)
.+++|- ++|||+|.+|+.+++++||+-+-
T Consensus 189 ~~v~VK--aaGGIrt~~~a~~~i~aGa~RiG 217 (231)
T 3ndo_A 189 ERLGVK--ASGGIRTAEQAAAMLDAGATRLG 217 (231)
T ss_dssp TTSEEE--EESSCCSHHHHHHHHHTTCSEEE
T ss_pred CCceEE--EeCCCCCHHHHHHHHHhcchhcc
Confidence 468888 78999999999999999999443
No 177
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=97.66 E-value=0.0011 Score=60.57 Aligned_cols=179 Identities=16% Similarity=0.131 Sum_probs=102.8
Q ss_pred cccCCCHHHHHHHHHcCCcEEEecc--CCcccccccC-C-CCCCCCHHHHHHHHhhcCcceeeccccCc------HHHHH
Q 021575 39 IMDVVTPEQARVAEEAGACAVMALE--RVPADIRSQG-G-VARMSDPQLIKEIKQSVTIPVMAKARIGH------FVEAQ 108 (310)
Q Consensus 39 i~~~~~~~~A~~~~~~Ga~~i~~L~--~~~~~~~~~~-G-~~~~~~~~~i~~i~~~~~iPv~vk~~~~~------~~~a~ 108 (310)
+...-|+-.|+.++++|++++ -+. .......... + ..+......++.|.+.+++||++..-.++ ...++
T Consensus 33 ~~~ayD~~sA~l~e~aG~dai-~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~d~Gyg~~~~v~~~v~ 111 (305)
T 3ih1_A 33 IPGAHDAMAALVARNTGFLAL-YLSGAAYTASKGLPDLGIVTSTEVAERARDLVRATDLPVLVDIDTGFGGVLNVARTAV 111 (305)
T ss_dssp EEBCSSHHHHHHHHHTTCSCE-EECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHHCCCEEEECTTCSSSHHHHHHHHH
T ss_pred EecCcCHHHHHHHHHcCCCEE-EECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCHHHHHHHHH
Confidence 344556788999999999987 221 0000000000 0 00111134666677788999999654342 34467
Q ss_pred HHHHcCCCEEEeCCC--------------CCchhHHHHHHh---cCCCCcEEEecCC-----H----HHHHHHHHhCCCE
Q 021575 109 ILEAIGIDYVDESEV--------------LTPADEENHINK---HNFRIPFVCGCRN-----L----GEALRRIREGAAM 162 (310)
Q Consensus 109 ~~~~aGad~Vi~~~~--------------~~~~~~~~~i~~---~~~~i~~~v~~~t-----~----~ea~~~~~~Gad~ 162 (310)
.+.++||++|.+-+. .+..+..+.++. .+.+..+..-+.. . +.++...++|+|.
T Consensus 112 ~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~ 191 (305)
T 3ih1_A 112 EMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAPSLYIVARTDARGVEGLDEAIERANAYVKAGADA 191 (305)
T ss_dssp HHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSE
T ss_pred HHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCCCeEEEEeeccccccCHHHHHHHHHHHHHcCCCE
Confidence 788899999942211 122344444432 2344444443332 2 3344445778888
Q ss_pred EEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEE-eCCCCCCCHHHHHHH
Q 021575 163 IRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVH-FAAGGVATPADAAMM 241 (310)
Q Consensus 163 V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~-iA~GGI~t~~d~~~~ 241 (310)
|.+.+. +..+.++++.+..++|+++ +..+|-.-.-+..++
T Consensus 192 i~~e~~---------------------------------------~~~~~~~~i~~~~~~P~~~n~~~~g~tp~~~~~eL 232 (305)
T 3ih1_A 192 IFPEAL---------------------------------------QSEEEFRLFNSKVNAPLLANMTEFGKTPYYSAEEF 232 (305)
T ss_dssp EEETTC---------------------------------------CSHHHHHHHHHHSCSCBEEECCTTSSSCCCCHHHH
T ss_pred EEEcCC---------------------------------------CCHHHHHHHHHHcCCCEEEeecCCCCCCCCCHHHH
Confidence 887642 1244566777767889864 234553222346666
Q ss_pred HHcCCCEEEEcccccc
Q 021575 242 MQLGCDGVFVGSGVFK 257 (310)
Q Consensus 242 l~~GadgV~VGsai~~ 257 (310)
-++|+.-|..|..+++
T Consensus 233 ~~lGv~~v~~~~~~~r 248 (305)
T 3ih1_A 233 ANMGFQMVIYPVTSLR 248 (305)
T ss_dssp HHTTCSEEEECSHHHH
T ss_pred HHcCCCEEEEchHHHH
Confidence 7899999999999987
No 178
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=97.65 E-value=6.2e-05 Score=68.88 Aligned_cols=92 Identities=18% Similarity=0.221 Sum_probs=65.1
Q ss_pred HHHHHHh-cCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccC
Q 021575 129 EENHINK-HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIA 207 (310)
Q Consensus 129 ~~~~i~~-~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~ 207 (310)
..+.+++ .+....+.+++.|.+++..+.+.|+|+|.+.... + +.+
T Consensus 186 ai~~~r~~~~~~~~i~vev~tlee~~~A~~aGaD~I~ld~~~----~----------------------~~l-------- 231 (299)
T 2jbm_A 186 AVRAARQAADFALKVEVECSSLQEAVQAAEAGADLVLLDNFK----P----------------------EEL-------- 231 (299)
T ss_dssp HHHHHHHHHTTTSCEEEEESSHHHHHHHHHTTCSEEEEESCC----H----------------------HHH--------
T ss_pred HHHHHHHhCCcCCeEEEecCCHHHHHHHHHcCCCEEEECCCC----H----------------------HHH--------
Confidence 3344444 3334788999999999999999999999986521 0 000
Q ss_pred CcHHHHHHHh-hcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 021575 208 APYDLVMQTK-QLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 208 ~~~~~i~~i~-~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~ 259 (310)
.+..+.+. ...++|+. ++||| +++++.++.++|+|++.+|+.+..++
T Consensus 232 --~~~v~~l~~~~~~~~I~--ASGGI-t~~ni~~~~~aGaD~i~vGs~i~~a~ 279 (299)
T 2jbm_A 232 --HPTATVLKAQFPSVAVE--ASGGI-TLDNLPQFCGPHIDVISMGMLTQAAP 279 (299)
T ss_dssp --HHHHHHHHHHCTTSEEE--EESSC-CTTTHHHHCCTTCCEEECTHHHHSCC
T ss_pred --HHHHHHhhccCCCeeEE--EECCC-CHHHHHHHHHCCCCEEEEChhhcCCC
Confidence 01122222 22457888 78999 89999999999999999999887653
No 179
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=97.62 E-value=0.00011 Score=65.19 Aligned_cols=63 Identities=14% Similarity=0.175 Sum_probs=47.1
Q ss_pred HHHHHHHhhcC-CCCEEEeCCCCCCCHH-----------HHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhccC
Q 021575 210 YDLVMQTKQLG-RLPVVHFAAGGVATPA-----------DAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHYS 276 (310)
Q Consensus 210 ~~~i~~i~~~~-~iPVi~iA~GGI~t~~-----------d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~~ 276 (310)
.+ ++.+++.. ..++. ..|||+ ++ ++.+++++|+|.+++||+|++++||...++++++.++...
T Consensus 165 ~e-i~~lr~~~~~~~i~--V~gGI~-~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a~dp~~a~~~l~~~i~~~~ 239 (246)
T 2yyu_A 165 NE-AAFIKERCGASFLA--VTPGIR-FADDAAHDQVRVVTPRKARALGSDYIVIGRSLTRAADPLRTYARLQHEWNGGE 239 (246)
T ss_dssp HH-HHHHHHHHCTTSEE--EECCCC-CCC-------CCCCHHHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHCC---
T ss_pred HH-HHHHHHhcCCCCEE--EeCCcC-CCCCCcccccccCCHHHHHHcCCCEEEECHhhcCCCCHHHHHHHHHHHHHHHH
Confidence 44 55565542 34555 369995 55 6888889999999999999999999999999988776443
No 180
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=97.60 E-value=0.00016 Score=65.55 Aligned_cols=94 Identities=16% Similarity=0.127 Sum_probs=67.3
Q ss_pred hhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhcc
Q 021575 127 ADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKI 206 (310)
Q Consensus 127 ~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~ 206 (310)
.+.++..++..+...+.+++.|.+++..+.++|+|+|.+++.. ++++
T Consensus 182 ~~av~~ar~~~~~~~I~Vev~t~eea~eal~aGaD~I~LDn~~--------------------------~~~~------- 228 (284)
T 1qpo_A 182 VDALRAVRNAAPDLPCEVEVDSLEQLDAVLPEKPELILLDNFA--------------------------VWQT------- 228 (284)
T ss_dssp HHHHHHHHHHCTTSCEEEEESSHHHHHHHGGGCCSEEEEETCC--------------------------HHHH-------
T ss_pred HHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHcCCCEEEECCCC--------------------------HHHH-------
Confidence 3455555554444488999999999999999999999887631 1111
Q ss_pred CCcHHHHHHHhh-cCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 021575 207 AAPYDLVMQTKQ-LGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 207 ~~~~~~i~~i~~-~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~ 259 (310)
.+.++.++. ..++++. ++||| |++++.++.++|+|.+.+|+.+..++
T Consensus 229 ---~~~v~~l~~~~~~v~ie--aSGGI-t~~~i~~~a~tGVD~isvG~l~~~a~ 276 (284)
T 1qpo_A 229 ---QTAVQRRDSRAPTVMLE--SSGGL-SLQTAATYAETGVDYLAVGALTHSVR 276 (284)
T ss_dssp ---HHHHHHHHHHCTTCEEE--EESSC-CTTTHHHHHHTTCSEEECGGGTSSBC
T ss_pred ---HHHHHHhhccCCCeEEE--EECCC-CHHHHHHHHhcCCCEEEECHHHcCCC
Confidence 112333332 1346776 78999 79999999999999999999887654
No 181
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=97.60 E-value=0.00067 Score=61.79 Aligned_cols=179 Identities=14% Similarity=0.173 Sum_probs=102.0
Q ss_pred cccCCCHHHHHHHHHcCCcEEEecc-C-Cc-cccccc--CCCCCCCCHHHHHHHHhhcCcceeeccccCc-------HHH
Q 021575 39 IMDVVTPEQARVAEEAGACAVMALE-R-VP-ADIRSQ--GGVARMSDPQLIKEIKQSVTIPVMAKARIGH-------FVE 106 (310)
Q Consensus 39 i~~~~~~~~A~~~~~~Ga~~i~~L~-~-~~-~~~~~~--~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~-------~~~ 106 (310)
+...-|+-.|+.++++|++++ -+. . .. ...... +...+......++.|.+.+++||++..-.++ ...
T Consensus 21 ~~~a~D~~sA~~~~~aG~~ai-~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~~ 99 (295)
T 1xg4_A 21 IVGTINANHALLAQRAGYQAI-YLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVART 99 (295)
T ss_dssp EEECSSHHHHHHHHHTTCSCE-EECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCSSSSHHHHHHH
T ss_pred EecCcCHHHHHHHHHcCCCEE-EECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCcccCCCHHHHHHH
Confidence 444557788999999999987 221 0 00 000000 0000111134666777888999999653332 355
Q ss_pred HHHHHHcCCCEEEeCCC--------------CCchhHHHHHHh---c--CCCCcEEEecCC---------HHHHHHHHHh
Q 021575 107 AQILEAIGIDYVDESEV--------------LTPADEENHINK---H--NFRIPFVCGCRN---------LGEALRRIRE 158 (310)
Q Consensus 107 a~~~~~aGad~Vi~~~~--------------~~~~~~~~~i~~---~--~~~i~~~v~~~t---------~~ea~~~~~~ 158 (310)
++.+.++||++|.+-+. .+..+....++. . ..+..+..-... .+.++...++
T Consensus 100 v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~ra~ay~eA 179 (295)
T 1xg4_A 100 VKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAYVEA 179 (295)
T ss_dssp HHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHHHHHHHHHHc
Confidence 67788899999942111 122233333322 1 233434332222 2334455678
Q ss_pred CCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEE-eCCCCCCCHHH
Q 021575 159 GAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVH-FAAGGVATPAD 237 (310)
Q Consensus 159 Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~-iA~GGI~t~~d 237 (310)
|+|.|.+++. ++.+.++++.+..++|+++ +..+|-...-+
T Consensus 180 GAd~i~~e~~---------------------------------------~~~~~~~~i~~~~~iP~~~N~~~~g~~p~~~ 220 (295)
T 1xg4_A 180 GAEMLFPEAI---------------------------------------TELAMYRQFADAVQVPILANITEFGATPLFT 220 (295)
T ss_dssp TCSEEEETTC---------------------------------------CSHHHHHHHHHHHCSCBEEECCSSSSSCCCC
T ss_pred CCCEEEEeCC---------------------------------------CCHHHHHHHHHHcCCCEEEEecccCCCCCCC
Confidence 9999988652 1244566676666789863 22344332345
Q ss_pred HHHHHHcCCCEEEEcccccc
Q 021575 238 AAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 238 ~~~~l~~GadgV~VGsai~~ 257 (310)
..++-++|++.|++|...++
T Consensus 221 ~~eL~~~G~~~v~~~~~~~~ 240 (295)
T 1xg4_A 221 TDELRSAHVAMALYPLSAFR 240 (295)
T ss_dssp HHHHHHTTCSEEEESSHHHH
T ss_pred HHHHHHcCCCEEEEChHHHH
Confidence 66767899999999999986
No 182
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=97.56 E-value=0.00018 Score=65.14 Aligned_cols=92 Identities=15% Similarity=0.155 Sum_probs=67.3
Q ss_pred chhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhc
Q 021575 126 PADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKK 205 (310)
Q Consensus 126 ~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~ 205 (310)
..+.++.+++..+..++.+++.|.+|+..+.++|+|+|.+.+.. ++++
T Consensus 185 i~~Av~~ar~~~~~~~IeVEv~tl~ea~eAl~aGaD~I~LDn~~--------------------------~~~l------ 232 (287)
T 3tqv_A 185 IAKAVTKAKKLDSNKVVEVEVTNLDELNQAIAAKADIVMLDNFS--------------------------GEDI------ 232 (287)
T ss_dssp HHHHHHHHHHHCTTSCEEEEESSHHHHHHHHHTTCSEEEEESCC--------------------------HHHH------
T ss_pred HHHHHHHHHhhCCCCcEEEEeCCHHHHHHHHHcCCCEEEEcCCC--------------------------HHHH------
Confidence 44555666655567889999999999999999999999886531 1111
Q ss_pred cCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 021575 206 IAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 206 ~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a 258 (310)
.+.++.+. .++++. ++||| +++++.++.++|+|.+.+|+....+
T Consensus 233 ----~~av~~~~--~~v~ie--aSGGI-t~~~i~~~a~tGVD~IsvGalt~sa 276 (287)
T 3tqv_A 233 ----DIAVSIAR--GKVALE--VSGNI-DRNSIVAIAKTGVDFISVGAITKHI 276 (287)
T ss_dssp ----HHHHHHHT--TTCEEE--EESSC-CTTTHHHHHTTTCSEEECSHHHHSB
T ss_pred ----HHHHHhhc--CCceEE--EECCC-CHHHHHHHHHcCCCEEEEChhhcCC
Confidence 11222232 256676 79999 7999999999999999998766553
No 183
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=97.53 E-value=0.00012 Score=64.73 Aligned_cols=60 Identities=20% Similarity=0.222 Sum_probs=46.5
Q ss_pred HHHHHHhhcC-CCCEEEeCCCCCCCHHHH-----------HHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHh
Q 021575 211 DLVMQTKQLG-RLPVVHFAAGGVATPADA-----------AMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVT 273 (310)
Q Consensus 211 ~~i~~i~~~~-~iPVi~iA~GGI~t~~d~-----------~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~ 273 (310)
+.++.+++.. +.++. ..|||+ ++.. .+++++|+|.+++||+|++++||...++++.+.++
T Consensus 164 ~~i~~lr~~~~~~~i~--v~gGI~-~~~~~~~dq~rv~tp~~a~~aGad~iVvGr~I~~a~dp~~a~~~l~~~i~ 235 (239)
T 1dbt_A 164 HEAKAIYQAVSPSFLT--VTPGIR-MSEDAANDQVRVATPAIAREKGSSAIVVGRSITKAEDPVKAYKAVRLEWE 235 (239)
T ss_dssp GGHHHHTTTSCTTCEE--EECCBC-CTTSCCTTCSSCBCHHHHHHTTCSEEEECHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcEE--EeCCcC-CCCCCccceeccCCHHHHHHcCCCEEEEChhhcCCCCHHHHHHHHHHHHH
Confidence 3345555543 35666 369995 5555 78889999999999999999999999999988775
No 184
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=97.53 E-value=8.7e-05 Score=67.71 Aligned_cols=92 Identities=15% Similarity=0.105 Sum_probs=55.5
Q ss_pred HHHHHHh-cCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccC
Q 021575 129 EENHINK-HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIA 207 (310)
Q Consensus 129 ~~~~i~~-~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~ 207 (310)
..+.+++ .+....+.+++.|.+++..+.+.|+|+|.+..... .. +
T Consensus 188 ai~~~r~~~~~~~~i~vev~tlee~~~A~~aGaD~I~ld~~~~-~~-------l-------------------------- 233 (294)
T 3c2e_A 188 AVKNARAVCGFAVKIEVECLSEDEATEAIEAGADVIMLDNFKG-DG-------L-------------------------- 233 (294)
T ss_dssp HHHHHHHHHCTTSCEEEECSSSHHHHHHHHHTCSEEECCC----------------------------------------
T ss_pred HHHHHHHhcCcCCeEEEecCCHHHHHHHHHcCCCEEEECCCCH-HH-------H--------------------------
Confidence 3444444 33347888999999999999999999999864210 00 0
Q ss_pred CcHHHHHHHhh----cCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCC
Q 021575 208 APYDLVMQTKQ----LGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 208 ~~~~~i~~i~~----~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~ 259 (310)
.+..+.+.. ..++|+. ++||| +++++.++.++|+|++.+|+.+..++
T Consensus 234 --~~~v~~l~~~~~g~~~v~I~--ASGGI-t~~ni~~~~~~GvD~i~vGs~i~~a~ 284 (294)
T 3c2e_A 234 --KMCAQSLKNKWNGKKHFLLE--CSGGL-NLDNLEEYLCDDIDIYSTSSIHQGTP 284 (294)
T ss_dssp -----------------CCEEE--EECCC-CC------CCCSCSEEECGGGTSSCC
T ss_pred --HHHHHHhcccccCCCCeEEE--EECCC-CHHHHHHHHHcCCCEEEEechhcCCC
Confidence 011111221 1237887 78999 89999999999999999999987643
No 185
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=97.52 E-value=0.00018 Score=68.51 Aligned_cols=46 Identities=11% Similarity=-0.050 Sum_probs=35.8
Q ss_pred HHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHc----CCCEEEEccccccCCCHH
Q 021575 213 VMQTKQLGRLPVVHFAAGGVATPADAAMMMQL----GCDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 213 i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~----GadgV~VGsai~~a~dp~ 262 (310)
++.+++..++||| ++|||.+.+|+.++++. +||.|++|++++. ||.
T Consensus 305 ~~~ir~~~~~PvI--~~Ggi~~~~dA~~~i~~~~~g~aDlVa~GR~~ia--NPd 354 (407)
T 3tjl_A 305 NEFVSKIWKGVIL--KAGNYSYDAPEFKTLKEDIADKRTLVGFSRYFTS--NPN 354 (407)
T ss_dssp SHHHHHHCCSEEE--EESCGGGGTTTTHHHHHHHTTSSEEEECSHHHHH--CTT
T ss_pred HHHHHHHhCCCEE--ecCCCCCHHHHHHHHHhhccCCCeEEEeChhhhh--Cch
Confidence 3445555678998 78999888877777754 5999999999998 665
No 186
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=97.51 E-value=0.00032 Score=61.78 Aligned_cols=33 Identities=30% Similarity=0.489 Sum_probs=27.3
Q ss_pred CCEEEeCCCCCCCHHHHHHHHHcCCC--EEEEccccc
Q 021575 222 LPVVHFAAGGVATPADAAMMMQLGCD--GVFVGSGVF 256 (310)
Q Consensus 222 iPVi~iA~GGI~t~~d~~~~l~~Gad--gV~VGsai~ 256 (310)
+||. ++|||++.+|+.+++++|++ |+..|..|+
T Consensus 193 v~VK--aaGGirt~~~al~~i~aGa~RiG~S~g~~I~ 227 (234)
T 1n7k_A 193 MGVK--ASGGIRSGIDAVLAVGAGADIIGTSSAVKVL 227 (234)
T ss_dssp CEEE--EESSCCSHHHHHHHHHTTCSEEEETTHHHHH
T ss_pred CCEE--EecCCCCHHHHHHHHHcCccccchHHHHHHH
Confidence 8998 78999999999999999999 655444444
No 187
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=97.49 E-value=6.2e-05 Score=66.29 Aligned_cols=51 Identities=20% Similarity=0.238 Sum_probs=44.0
Q ss_pred CCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHH
Q 021575 207 AAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 207 ~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~ 262 (310)
...++.+++++ ..++|++ +.|||++++++.+++++|||+|++|++++. +|.
T Consensus 60 ~~~~~~i~~i~-~~~ipvi--~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~--~p~ 110 (241)
T 1qo2_A 60 GENLPVLEKLS-EFAEHIQ--IGGGIRSLDYAEKLRKLGYRRQIVSSKVLE--DPS 110 (241)
T ss_dssp CTTHHHHHHGG-GGGGGEE--EESSCCSHHHHHHHHHTTCCEEEECHHHHH--CTT
T ss_pred chhHHHHHHHH-hcCCcEE--EECCCCCHHHHHHHHHCCCCEEEECchHhh--ChH
Confidence 34577888888 6789998 579999999999999999999999999997 553
No 188
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.46 E-value=0.0033 Score=61.06 Aligned_cols=112 Identities=22% Similarity=0.270 Sum_probs=70.3
Q ss_pred HHHHHHHHcCCCEEE-eCC------CCCchhHHHHHHh-c---C-CC-CcEEEec----CCHHHHHHHHHhCCCEEEEcC
Q 021575 105 VEAQILEAIGIDYVD-ESE------VLTPADEENHINK-H---N-FR-IPFVCGC----RNLGEALRRIREGAAMIRTKG 167 (310)
Q Consensus 105 ~~a~~~~~aGad~Vi-~~~------~~~~~~~~~~i~~-~---~-~~-i~~~v~~----~t~~ea~~~~~~Gad~V~v~g 167 (310)
+.++.+.+.+.+.+. ... ..+..++.+.+.. . . .+ +.+...+ .+.+++.++.+.|+|.+.+++
T Consensus 174 ~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~~~~~~d~~~~~~vg~~i~~~~~~~~~a~~l~~~G~d~ivi~~ 253 (491)
T 1zfj_A 174 TAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERAEALFEAGADAIVIDT 253 (491)
T ss_dssp HHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhccccccCcCCcEEEEEeccCchhHHHHHHHHHHcCCCeEEEee
Confidence 444666677777763 221 1234555555542 0 0 11 2222222 236788888889999988875
Q ss_pred CCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcC-CCCEEEeCCCCCCCHHHHHHHHHcCC
Q 021575 168 EAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGC 246 (310)
Q Consensus 168 ~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~-~iPVi~iA~GGI~t~~d~~~~l~~Ga 246 (310)
.. ++. ...++.++++++.. ++|++ .|+|.+.+++..++++|+
T Consensus 254 a~--g~~--------------------------------~~~~~~i~~l~~~~p~~pvi---~G~v~t~~~a~~~~~~Ga 296 (491)
T 1zfj_A 254 AH--GHS--------------------------------AGVLRKIAEIRAHFPNRTLI---AGNIATAEGARALYDAGV 296 (491)
T ss_dssp SC--TTC--------------------------------HHHHHHHHHHHHHCSSSCEE---EEEECSHHHHHHHHHTTC
T ss_pred ec--Ccc--------------------------------hhHHHHHHHHHHHCCCCcEe---CCCccCHHHHHHHHHcCC
Confidence 32 120 11245666676665 78997 489999999999999999
Q ss_pred CEEEEcc
Q 021575 247 DGVFVGS 253 (310)
Q Consensus 247 dgV~VGs 253 (310)
|+|.+|.
T Consensus 297 d~I~vg~ 303 (491)
T 1zfj_A 297 DVVKVGI 303 (491)
T ss_dssp SEEEECS
T ss_pred CEEEECc
Confidence 9999983
No 189
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=97.43 E-value=0.0032 Score=55.34 Aligned_cols=124 Identities=15% Similarity=0.181 Sum_probs=83.8
Q ss_pred HHHHHHhhcCcceeeccccCc-HHHHHHHHHcCCCEEEe-CCCCCchhHHHHHHhcCCCCcEEEe-cCCHHHHHHHHHhC
Q 021575 83 LIKEIKQSVTIPVMAKARIGH-FVEAQILEAIGIDYVDE-SEVLTPADEENHINKHNFRIPFVCG-CRNLGEALRRIREG 159 (310)
Q Consensus 83 ~i~~i~~~~~iPv~vk~~~~~-~~~a~~~~~aGad~Vi~-~~~~~~~~~~~~i~~~~~~i~~~v~-~~t~~ea~~~~~~G 159 (310)
.++.+++.-=+||+....... .+.++.+.+.|++.+-. -......+.++.+++..+++.+.++ +.+.++++.+.++|
T Consensus 27 ~~~~l~~~~vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AG 106 (232)
T 4e38_A 27 INNQLKALKVIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAG 106 (232)
T ss_dssp HHHHHHHHCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHT
T ss_pred HHHHHHhCCEEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcC
Confidence 445555544467775544332 45678899999999943 3333455666666654456767665 67899999999999
Q ss_pred CCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHH
Q 021575 160 AAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAA 239 (310)
Q Consensus 160 ad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~ 239 (310)
++++.. + .. +.+.++..++ .++|++ =|+.|++++.
T Consensus 107 A~fIvs-P-~~--------------------------------------~~~vi~~~~~-~gi~~i----pGv~TptEi~ 141 (232)
T 4e38_A 107 ATFVVS-P-GF--------------------------------------NPNTVRACQE-IGIDIV----PGVNNPSTVE 141 (232)
T ss_dssp CSEEEC-S-SC--------------------------------------CHHHHHHHHH-HTCEEE----CEECSHHHHH
T ss_pred CCEEEe-C-CC--------------------------------------CHHHHHHHHH-cCCCEE----cCCCCHHHHH
Confidence 999953 2 11 1223333333 367887 3788999999
Q ss_pred HHHHcCCCEEEE
Q 021575 240 MMMQLGCDGVFV 251 (310)
Q Consensus 240 ~~l~~GadgV~V 251 (310)
+++++|+|.|-+
T Consensus 142 ~A~~~Gad~vK~ 153 (232)
T 4e38_A 142 AALEMGLTTLKF 153 (232)
T ss_dssp HHHHTTCCEEEE
T ss_pred HHHHcCCCEEEE
Confidence 999999999975
No 190
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=97.38 E-value=0.00063 Score=61.87 Aligned_cols=92 Identities=18% Similarity=0.201 Sum_probs=64.6
Q ss_pred chhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhc
Q 021575 126 PADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKK 205 (310)
Q Consensus 126 ~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~ 205 (310)
..+..+.+++..+..++.+.+.|.++++.+.++|+|+|.+.+.. ++.+
T Consensus 196 i~~Av~~~r~~~p~~~ieVEvdtlde~~eAl~aGaD~I~LDn~~--------------------------~~~l------ 243 (298)
T 3gnn_A 196 VGEALDAAFALNAEVPVQIEVETLDQLRTALAHGARSVLLDNFT--------------------------LDMM------ 243 (298)
T ss_dssp HHHHHHHHHHHC--CCCEEEESSHHHHHHHHHTTCEEEEEESCC--------------------------HHHH------
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHcCCCEEEECCCC--------------------------HHHH------
Confidence 34555555554456788899999999999999999999886531 1110
Q ss_pred cCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 021575 206 IAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 206 ~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a 258 (310)
.+.++.+. .++++. ++||| +++++.++.++|+|.+.+|+....+
T Consensus 244 ----~~av~~i~--~~v~ie--aSGGI-~~~~i~~~a~tGVD~isvG~lt~sa 287 (298)
T 3gnn_A 244 ----RDAVRVTE--GRAVLE--VSGGV-NFDTVRAIAETGVDRISIGALTKDV 287 (298)
T ss_dssp ----HHHHHHHT--TSEEEE--EESSC-STTTHHHHHHTTCSEEECGGGGTSC
T ss_pred ----HHHHHHhC--CCCeEE--EEcCC-CHHHHHHHHHcCCCEEEECCeecCC
Confidence 11222222 345565 89999 7999999999999999999977654
No 191
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=97.38 E-value=0.00036 Score=61.05 Aligned_cols=51 Identities=27% Similarity=0.455 Sum_probs=43.5
Q ss_pred HHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHH
Q 021575 210 YDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKR 264 (310)
Q Consensus 210 ~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~ 264 (310)
.+.++++++..++|++ +.|||.+++++.+++++|||+|.+++.++. +|...
T Consensus 66 ~~~i~~i~~~~~ipvi--~~g~i~~~~~~~~~~~~Gad~V~i~~~~~~--~~~~~ 116 (253)
T 1h5y_A 66 IDSVKRVAEAVSIPVL--VGGGVRSLEDATTLFRAGADKVSVNTAAVR--NPQLV 116 (253)
T ss_dssp HHHHHHHHHHCSSCEE--EESSCCSHHHHHHHHHHTCSEEEESHHHHH--CTHHH
T ss_pred HHHHHHHHHhcCCCEE--EECCCCCHHHHHHHHHcCCCEEEEChHHhh--CcHHH
Confidence 5567778777789998 679999999999999999999999999986 56533
No 192
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=97.38 E-value=0.00054 Score=62.89 Aligned_cols=90 Identities=19% Similarity=0.174 Sum_probs=64.4
Q ss_pred hhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhcc
Q 021575 127 ADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKI 206 (310)
Q Consensus 127 ~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~ 206 (310)
.+..+.+++..+..++.+.+.|.++++.+.++|+|+|.+.+.. ++.+
T Consensus 219 ~~Av~~ar~~~p~~kIeVEVdtldea~eAl~aGaD~I~LDn~~--------------------------~~~l------- 265 (320)
T 3paj_A 219 RQAISTAKQLNPGKPVEVETETLAELEEAISAGADIIMLDNFS--------------------------LEMM------- 265 (320)
T ss_dssp HHHHHHHHHHSTTSCEEEEESSHHHHHHHHHTTCSEEEEESCC--------------------------HHHH-------
T ss_pred HHHHHHHHHhCCCCeEEEEECCHHHHHHHHHcCCCEEEECCCC--------------------------HHHH-------
Confidence 3455555554556788899999999999999999999886521 1110
Q ss_pred CCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 021575 207 AAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 207 ~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~ 257 (310)
.+.++.+. .++++. ++||| +++++.++.++|+|.+.+|+....
T Consensus 266 ---~~av~~l~--~~v~ie--aSGGI-t~~~I~~~a~tGVD~isvGalt~s 308 (320)
T 3paj_A 266 ---REAVKINA--GRAALE--NSGNI-TLDNLKECAETGVDYISVGALTKH 308 (320)
T ss_dssp ---HHHHHHHT--TSSEEE--EESSC-CHHHHHHHHTTTCSEEECTHHHHS
T ss_pred ---HHHHHHhC--CCCeEE--EECCC-CHHHHHHHHHcCCCEEEECceecC
Confidence 11122222 356676 89999 799999999999999999986544
No 193
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=97.36 E-value=0.0054 Score=55.81 Aligned_cols=179 Identities=15% Similarity=0.184 Sum_probs=101.4
Q ss_pred cccCCCHHHHHHHHHcCCcEEEecc--CCc-cccccc--CCCCCCCCHHHHHHHHhhcCcceeeccccCc------HHHH
Q 021575 39 IMDVVTPEQARVAEEAGACAVMALE--RVP-ADIRSQ--GGVARMSDPQLIKEIKQSVTIPVMAKARIGH------FVEA 107 (310)
Q Consensus 39 i~~~~~~~~A~~~~~~Ga~~i~~L~--~~~-~~~~~~--~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~------~~~a 107 (310)
+...-|+-.|+.++++|++++ .+. ... ...... +...+......++.|.+.+++||++..-.++ ...+
T Consensus 26 ~~~a~D~~sA~l~e~aGf~ai-~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~v~~~v 104 (298)
T 3eoo_A 26 VVGAITAYAAKMAEAVGFKAV-YLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNLPLLVDIDTGWGGAFNIARTI 104 (298)
T ss_dssp EEECSSHHHHHHHHHHTCSCE-EECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEECTTCSSSHHHHHHHH
T ss_pred EecCCCHHHHHHHHHcCCCEE-EECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCCeEEEECCCCCCCHHHHHHHH
Confidence 344557788999999999987 221 000 000000 0000111134667777888999999644442 3456
Q ss_pred HHHHHcCCCEEEeCC--------------CCCchhHHHHHHh-----cCCCCcEEEecCCH---------HHHHHHHHhC
Q 021575 108 QILEAIGIDYVDESE--------------VLTPADEENHINK-----HNFRIPFVCGCRNL---------GEALRRIREG 159 (310)
Q Consensus 108 ~~~~~aGad~Vi~~~--------------~~~~~~~~~~i~~-----~~~~i~~~v~~~t~---------~ea~~~~~~G 159 (310)
+.+.++||.+|.+-+ ..+..+....++. .+.++.+++-+... +.++...++|
T Consensus 105 ~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~Ra~ay~~AG 184 (298)
T 3eoo_A 105 RSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAG 184 (298)
T ss_dssp HHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHHHHHHhhHhcC
Confidence 788889999994111 1233344444422 12444454443332 2233345779
Q ss_pred CCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEE-eCCCCCCCHHHH
Q 021575 160 AAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVH-FAAGGVATPADA 238 (310)
Q Consensus 160 ad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~-iA~GGI~t~~d~ 238 (310)
+|.|.+.+.. +.+.++++++..++|+++ +..+|-...-+.
T Consensus 185 AD~if~~~~~---------------------------------------~~ee~~~~~~~~~~Pl~~n~~~~g~tp~~~~ 225 (298)
T 3eoo_A 185 ADMIFPEAMK---------------------------------------TLDDYRRFKEAVKVPILANLTEFGSTPLFTL 225 (298)
T ss_dssp CSEEEECCCC---------------------------------------SHHHHHHHHHHHCSCBEEECCTTSSSCCCCH
T ss_pred CCEEEeCCCC---------------------------------------CHHHHHHHHHHcCCCeEEEeccCCCCCCCCH
Confidence 9998876521 233455565555678753 234553222356
Q ss_pred HHHHHcCCCEEEEcccccc
Q 021575 239 AMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 239 ~~~l~~GadgV~VGsai~~ 257 (310)
.++-++|+.-|..|..+++
T Consensus 226 ~eL~~lGv~~v~~~~~~~r 244 (298)
T 3eoo_A 226 DELKGANVDIALYCCGAYR 244 (298)
T ss_dssp HHHHHTTCCEEEECSHHHH
T ss_pred HHHHHcCCeEEEEchHHHH
Confidence 6778899999999999997
No 194
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=97.35 E-value=0.00064 Score=61.74 Aligned_cols=92 Identities=14% Similarity=0.113 Sum_probs=66.3
Q ss_pred chhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhc
Q 021575 126 PADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKK 205 (310)
Q Consensus 126 ~~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~ 205 (310)
..+.++.+++..+...+.+.+.|.+|+..+.++|+|+|.+.+.. ++++
T Consensus 194 i~~Av~~ar~~~p~~kIeVEv~tl~e~~eAl~aGaDiImLDn~s--------------------------~~~l------ 241 (300)
T 3l0g_A 194 ITLAIQRLRKNLKNEYIAIECDNISQVEESLSNNVDMILLDNMS--------------------------ISEI------ 241 (300)
T ss_dssp HHHHHHHHHHHSSSCCEEEEESSHHHHHHHHHTTCSEEEEESCC--------------------------HHHH------
T ss_pred HHHHHHHHHHhCCCCCEEEEECCHHHHHHHHHcCCCEEEECCCC--------------------------HHHH------
Confidence 34555556555566889999999999999999999999876531 1111
Q ss_pred cCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 021575 206 IAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 206 ~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a 258 (310)
.+.++.+. .++.+. ++||| |++++.++.++|+|.+.+|+....+
T Consensus 242 ----~~av~~~~--~~v~le--aSGGI-t~~~i~~~A~tGVD~IsvGalthsa 285 (300)
T 3l0g_A 242 ----KKAVDIVN--GKSVLE--VSGCV-NIRNVRNIALTGVDYISIGCITNSF 285 (300)
T ss_dssp ----HHHHHHHT--TSSEEE--EESSC-CTTTHHHHHTTTCSEEECGGGTSSC
T ss_pred ----HHHHHhhc--CceEEE--EECCC-CHHHHHHHHHcCCCEEEeCccccCC
Confidence 11233333 245565 89999 7999999999999999999766543
No 195
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=97.34 E-value=0.00033 Score=61.52 Aligned_cols=56 Identities=21% Similarity=0.381 Sum_probs=46.4
Q ss_pred HHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHH
Q 021575 211 DLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRA 271 (310)
Q Consensus 211 ~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~ 271 (310)
+.++++++..++|++ ..|||.+++++..++++|||+|++|+..+. +|....+ +.+.
T Consensus 64 ~~i~~i~~~~~ipv~--v~ggi~~~~~~~~~l~~Gad~V~lg~~~l~--~p~~~~~-~~~~ 119 (244)
T 2y88_A 64 ELLAEVVGKLDVQVE--LSGGIRDDESLAAALATGCARVNVGTAALE--NPQWCAR-VIGE 119 (244)
T ss_dssp HHHHHHHHHCSSEEE--EESSCCSHHHHHHHHHTTCSEEEECHHHHH--CHHHHHH-HHHH
T ss_pred HHHHHHHHhcCCcEE--EECCCCCHHHHHHHHHcCCCEEEECchHhh--ChHHHHH-HHHH
Confidence 778888887889998 579999999999999999999999999986 6754333 4443
No 196
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=97.32 E-value=0.00031 Score=61.82 Aligned_cols=52 Identities=23% Similarity=0.384 Sum_probs=44.6
Q ss_pred HHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHH
Q 021575 211 DLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQ 266 (310)
Q Consensus 211 ~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~ 266 (310)
+.++.+++..++|++ ..|||.+++++..++++|||+|.+|+..+. +|....+
T Consensus 65 ~~i~~i~~~~~ipv~--v~ggI~~~~~~~~~l~~Gad~V~lg~~~l~--~p~~~~~ 116 (244)
T 1vzw_A 65 ALIAEVAQAMDIKVE--LSGGIRDDDTLAAALATGCTRVNLGTAALE--TPEWVAK 116 (244)
T ss_dssp HHHHHHHHHCSSEEE--EESSCCSHHHHHHHHHTTCSEEEECHHHHH--CHHHHHH
T ss_pred HHHHHHHHhcCCcEE--EECCcCCHHHHHHHHHcCCCEEEECchHhh--CHHHHHH
Confidence 678888887899998 579999999999999999999999999986 6754433
No 197
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.32 E-value=0.0069 Score=52.85 Aligned_cols=126 Identities=17% Similarity=0.232 Sum_probs=83.4
Q ss_pred HHHHHHHHhhcCcceeeccccC-cHHHHHHHHHcCCCEEE-eCCCCCchhHHHHHHhcCCCCcEEEe-cCCHHHHHHHHH
Q 021575 81 PQLIKEIKQSVTIPVMAKARIG-HFVEAQILEAIGIDYVD-ESEVLTPADEENHINKHNFRIPFVCG-CRNLGEALRRIR 157 (310)
Q Consensus 81 ~~~i~~i~~~~~iPv~vk~~~~-~~~~a~~~~~aGad~Vi-~~~~~~~~~~~~~i~~~~~~i~~~v~-~~t~~ea~~~~~ 157 (310)
.+.+..+++.-=+||+...... ..+.++.+.+.|++.+- .-......+..+.+++..+++.+.++ +.+.+++..+.+
T Consensus 8 ~~~~~~l~~~~ii~vir~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~ 87 (224)
T 1vhc_A 8 QQIIEKLRELKIVPVIALDNADDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRPDFLIAAGTVLTAEQVVLAKS 87 (224)
T ss_dssp HHHHHHHHHHCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEESCCSHHHHHHHHH
T ss_pred HHHHHHHHHCCeEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHH
Confidence 3556666655556776554333 24667899999999994 33333344555544444446666665 457789999999
Q ss_pred hCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHH
Q 021575 158 EGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPAD 237 (310)
Q Consensus 158 ~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d 237 (310)
+|+|+|.. + .. +.+.++..++ ...|++ + |+.|+++
T Consensus 88 aGAd~v~~-p-~~--------------------------------------d~~v~~~ar~-~g~~~i-~---Gv~t~~e 122 (224)
T 1vhc_A 88 SGADFVVT-P-GL--------------------------------------NPKIVKLCQD-LNFPIT-P---GVNNPMA 122 (224)
T ss_dssp HTCSEEEC-S-SC--------------------------------------CHHHHHHHHH-TTCCEE-C---EECSHHH
T ss_pred CCCCEEEE-C-CC--------------------------------------CHHHHHHHHH-hCCCEE-e---ccCCHHH
Confidence 99999943 2 10 1222333444 567886 2 5999999
Q ss_pred HHHHHHcCCCEEEE
Q 021575 238 AAMMMQLGCDGVFV 251 (310)
Q Consensus 238 ~~~~l~~GadgV~V 251 (310)
+.++.+.|+|.|.+
T Consensus 123 ~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 123 IEIALEMGISAVKF 136 (224)
T ss_dssp HHHHHHTTCCEEEE
T ss_pred HHHHHHCCCCEEEE
Confidence 99999999999988
No 198
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=97.31 E-value=0.0036 Score=57.81 Aligned_cols=73 Identities=15% Similarity=0.203 Sum_probs=45.7
Q ss_pred HHHHhhcCCCCEEEeCCCCCCCHHHHH----HHHHcCC--CEEEEccccccCCCHHHHHHHHHHHHhccCChhh---hhh
Q 021575 213 VMQTKQLGRLPVVHFAAGGVATPADAA----MMMQLGC--DGVFVGSGVFKSGDPVKRAQAIVRAVTHYSDPEV---LAE 283 (310)
Q Consensus 213 i~~i~~~~~iPVi~iA~GGI~t~~d~~----~~l~~Ga--dgV~VGsai~~a~dp~~~a~~l~~~i~~~~~~~~---~~~ 283 (310)
.+++.+.+.+|+++ .+||. +.+++. .++++|| .||++||+++++. ....++.=.++..+|++.++ +.+
T Consensus 237 f~~~~~a~~~P~v~-lsgG~-~~~~fl~~v~~A~~aGa~f~Gv~~GRnvwq~~-v~~~~~~~~~~~~~~l~~~g~~~i~~ 313 (332)
T 3iv3_A 237 FREQEASTDLPYIY-LSAGV-SAELFQETLVFAHKAGAKFNGVLCGRATWAGS-VQVYMEEGKEAARQWLRTSGLQNINE 313 (332)
T ss_dssp HHHHHHTCSSCEEE-ECTTC-CHHHHHHHHHHHHHHTCCCCEEEECHHHHTTH-HHHHHHHCHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHhcCCCCEEE-ECCCC-CHHHHHHHHHHHHHcCCCcceEEeeHHHHHhh-hhhhccccHHHHHHHHHHHhHHHHHH
Confidence 45555667899875 48998 455544 4456899 9999999999832 22222222446667776444 344
Q ss_pred hhhhc
Q 021575 284 VSCGL 288 (310)
Q Consensus 284 ~~~~~ 288 (310)
|+..+
T Consensus 314 l~~v~ 318 (332)
T 3iv3_A 314 LNKVL 318 (332)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
No 199
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=97.27 E-value=0.011 Score=53.29 Aligned_cols=175 Identities=18% Similarity=0.170 Sum_probs=95.8
Q ss_pred ccCCCHHHHHHHHHcCCcEEEecc--CCccccccc--CCCCCCCCHHHHHHHHhhcCcceeeccccCc-------HHHHH
Q 021575 40 MDVVTPEQARVAEEAGACAVMALE--RVPADIRSQ--GGVARMSDPQLIKEIKQSVTIPVMAKARIGH-------FVEAQ 108 (310)
Q Consensus 40 ~~~~~~~~A~~~~~~Ga~~i~~L~--~~~~~~~~~--~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~-------~~~a~ 108 (310)
...-|+-.|+.++++|++++ .+. ......... +...+......++.|.+.+++||++..-.++ ...++
T Consensus 21 ~~a~D~~sA~~~~~aG~~ai-~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~pviaD~d~Gyg~~~~~~~~~v~ 99 (275)
T 2ze3_A 21 PNAWDVASARLLEAAGFTAI-GTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRAVAIPVNADIEAGYGHAPEDVRRTVE 99 (275)
T ss_dssp CEESSHHHHHHHHHHTCSCE-EECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHHCSSCEEEECTTCSSSSHHHHHHHHH
T ss_pred ecccCHHHHHHHHHcCCCEE-EECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEeecCCCCCCCHHHHHHHHH
Confidence 33456788999999999987 221 000000000 0000111134667777888999999744332 34567
Q ss_pred HHHHcCCCEEEeCCC--------CCchhHHHHHHh---c----CCCCcEEEecCC------------HHH----HHHHHH
Q 021575 109 ILEAIGIDYVDESEV--------LTPADEENHINK---H----NFRIPFVCGCRN------------LGE----ALRRIR 157 (310)
Q Consensus 109 ~~~~aGad~Vi~~~~--------~~~~~~~~~i~~---~----~~~i~~~v~~~t------------~~e----a~~~~~ 157 (310)
.+.++||.+|.+-+. .+..+..+.++. . +....+..-... .++ ++...+
T Consensus 100 ~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~e 179 (275)
T 2ze3_A 100 HFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAETVRRGQAYAD 179 (275)
T ss_dssp HHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHHHHHHHHHHHH
Confidence 788899999952221 233334333332 1 222222221111 122 222334
Q ss_pred hCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHH
Q 021575 158 EGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPAD 237 (310)
Q Consensus 158 ~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d 237 (310)
+|+|.|.+.+ .++.+.++++.+..++|+.+....+.-+
T Consensus 180 AGAd~i~~e~---------------------------------------~~~~~~~~~i~~~~~~P~n~~~~~~~~~--- 217 (275)
T 2ze3_A 180 AGADGIFVPL---------------------------------------ALQSQDIRALADALRVPLNVMAFPGSPV--- 217 (275)
T ss_dssp TTCSEEECTT---------------------------------------CCCHHHHHHHHHHCSSCEEEECCTTSCC---
T ss_pred CCCCEEEECC---------------------------------------CCCHHHHHHHHHhcCCCEEEecCCCCCC---
Confidence 5666665543 1224567777777789987543334434
Q ss_pred HHHHHHcCCCEEEEcccccc
Q 021575 238 AAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 238 ~~~~l~~GadgV~VGsai~~ 257 (310)
..++-++|+.-|..+...++
T Consensus 218 ~~eL~~lGv~~v~~~~~~~r 237 (275)
T 2ze3_A 218 PRALLDAGAARVSFGQSLML 237 (275)
T ss_dssp HHHHHHTTCSEEECTTHHHH
T ss_pred HHHHHHcCCcEEEEChHHHH
Confidence 45667899999999998886
No 200
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.27 E-value=0.0024 Score=55.51 Aligned_cols=113 Identities=24% Similarity=0.252 Sum_probs=75.9
Q ss_pred cceeeccccCc-HHHHHHHHHcCCCEEEeCC-CCCchhHHHHHHhcCCCCcEEEe-cCCHHHHHHHHHhCCCEEEEcCCC
Q 021575 93 IPVMAKARIGH-FVEAQILEAIGIDYVDESE-VLTPADEENHINKHNFRIPFVCG-CRNLGEALRRIREGAAMIRTKGEA 169 (310)
Q Consensus 93 iPv~vk~~~~~-~~~a~~~~~aGad~Vi~~~-~~~~~~~~~~i~~~~~~i~~~v~-~~t~~ea~~~~~~Gad~V~v~g~~ 169 (310)
+||+..+.... ...++.+.+.|++.+-.+. .....+.++.+++..+++.++++ +.|.++++.+.++|++++..-+
T Consensus 16 i~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivsP~-- 93 (217)
T 3lab_A 16 IPVIVIDDLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVSPG-- 93 (217)
T ss_dssp EEEECCSCGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEESS--
T ss_pred EEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEeCC--
Confidence 45554333222 3557889999999995332 23344566666665566777776 7899999999999999996421
Q ss_pred CCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCC------CEEEeCCCCCCCHHHHHHHHH
Q 021575 170 GTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRL------PVVHFAAGGVATPADAAMMMQ 243 (310)
Q Consensus 170 ~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~i------PVi~iA~GGI~t~~d~~~~l~ 243 (310)
.+ .+.++..++ .++ |++ =|+.|++++.++++
T Consensus 94 ~~--------------------------------------~evi~~~~~-~~v~~~~~~~~~----PG~~TptE~~~A~~ 130 (217)
T 3lab_A 94 LT--------------------------------------PELIEKAKQ-VKLDGQWQGVFL----PGVATASEVMIAAQ 130 (217)
T ss_dssp CC--------------------------------------HHHHHHHHH-HHHHCSCCCEEE----EEECSHHHHHHHHH
T ss_pred Cc--------------------------------------HHHHHHHHH-cCCCccCCCeEe----CCCCCHHHHHHHHH
Confidence 11 122222222 245 776 38899999999999
Q ss_pred cCCCEEE
Q 021575 244 LGCDGVF 250 (310)
Q Consensus 244 ~GadgV~ 250 (310)
+|+|.+-
T Consensus 131 ~Gad~vK 137 (217)
T 3lab_A 131 AGITQLK 137 (217)
T ss_dssp TTCCEEE
T ss_pred cCCCEEE
Confidence 9999994
No 201
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=97.17 E-value=0.003 Score=56.29 Aligned_cols=35 Identities=17% Similarity=0.285 Sum_probs=30.7
Q ss_pred HHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHH
Q 021575 238 AAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAV 272 (310)
Q Consensus 238 ~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i 272 (310)
..+++++|+|.+++||+|++++||...++++++.+
T Consensus 220 ~~~a~~aGad~iVvGr~I~~a~dp~~a~~~i~~ei 254 (255)
T 3ldv_A 220 PAQAIASGSDYLVIGRPITQAAHPEVVLEEINSSL 254 (255)
T ss_dssp HHHHHHTTCSEEEECHHHHTCSCHHHHHHHHHHHC
T ss_pred HHHHHHcCCCEEEECHHHhCCCCHHHHHHHHHHhh
Confidence 45668899999999999999999999998887654
No 202
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=97.15 E-value=0.0046 Score=56.78 Aligned_cols=179 Identities=14% Similarity=0.066 Sum_probs=102.2
Q ss_pred cccCCCHHHHHHHHHcCCcEEEeccC--Cc-cccccc--CCCCCCCCHHHHHHHHhhc-CcceeeccccCc------HHH
Q 021575 39 IMDVVTPEQARVAEEAGACAVMALER--VP-ADIRSQ--GGVARMSDPQLIKEIKQSV-TIPVMAKARIGH------FVE 106 (310)
Q Consensus 39 i~~~~~~~~A~~~~~~Ga~~i~~L~~--~~-~~~~~~--~G~~~~~~~~~i~~i~~~~-~iPv~vk~~~~~------~~~ 106 (310)
+...-|+-.|+.++++|+++| -+.. .. ...... +-..+......++.|.+.+ ++||++..-.++ ...
T Consensus 43 ~~~ayD~~sA~i~e~aGfdai-~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~~PviaD~d~Gyg~~~~v~~t 121 (318)
T 1zlp_A 43 MPGVQDALSAAVVEKTGFHAA-FVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVDGDTGGGGPLNVQRF 121 (318)
T ss_dssp EEEECSHHHHHHHHHTTCSEE-EECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEECTTCSSSHHHHHHH
T ss_pred EecCCCHHHHHHHHHcCCCEE-EECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccCCCEEEeCCCCCCCHHHHHHH
Confidence 445567788999999999987 2210 00 000000 0010111134666777788 999999754442 355
Q ss_pred HHHHHHcCCCEEEeCCC--------------CCchhHHHHHHh---c--CCCCcEEEecCCH---------HHHHHHHHh
Q 021575 107 AQILEAIGIDYVDESEV--------------LTPADEENHINK---H--NFRIPFVCGCRNL---------GEALRRIRE 158 (310)
Q Consensus 107 a~~~~~aGad~Vi~~~~--------------~~~~~~~~~i~~---~--~~~i~~~v~~~t~---------~ea~~~~~~ 158 (310)
++.+.++||.+|.+-+. .+..+..+.++. . ..+..+..-.... ++++...++
T Consensus 122 v~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~ai~Ra~Ay~eA 201 (318)
T 1zlp_A 122 IRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGIRRANLYKEA 201 (318)
T ss_dssp HHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHHHHHHHHHHHc
Confidence 67888899999942111 122233323222 1 1334444332221 234445677
Q ss_pred CCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEE-eCCCCCCCHHH
Q 021575 159 GAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVH-FAAGGVATPAD 237 (310)
Q Consensus 159 Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~-iA~GGI~t~~d 237 (310)
|+|.|.+.+. ++.+.++++.+..++|+++ +..+|-...-+
T Consensus 202 GAd~i~~e~~---------------------------------------~~~e~~~~i~~~l~~P~lan~~~~g~~~~~~ 242 (318)
T 1zlp_A 202 GADATFVEAP---------------------------------------ANVDELKEVSAKTKGLRIANMIEGGKTPLHT 242 (318)
T ss_dssp TCSEEEECCC---------------------------------------CSHHHHHHHHHHSCSEEEEEECTTSSSCCCC
T ss_pred CCCEEEEcCC---------------------------------------CCHHHHHHHHHhcCCCEEEEeccCCCCCCCC
Confidence 9998877541 1244567777777899853 23455322334
Q ss_pred HHHHHHcCCCEEEEcccccc
Q 021575 238 AAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 238 ~~~~l~~GadgV~VGsai~~ 257 (310)
..++-++|+.-|..+..+++
T Consensus 243 ~~eL~~lGv~~v~~~~~~~r 262 (318)
T 1zlp_A 243 PEEFKEMGFHLIAHSLTAVY 262 (318)
T ss_dssp HHHHHHHTCCEEEECSHHHH
T ss_pred HHHHHHcCCeEEEEchHHHH
Confidence 66668899999999999886
No 203
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=97.15 E-value=0.009 Score=50.57 Aligned_cols=37 Identities=22% Similarity=0.179 Sum_probs=31.3
Q ss_pred HHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcc
Q 021575 211 DLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGS 253 (310)
Q Consensus 211 ~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGs 253 (310)
+.++++ .++|++ |+|+|++.+|+.+ +++||++|..++
T Consensus 142 ~~I~~v---~~~PiI--aGGlI~t~edv~~-l~aGA~aIsTs~ 178 (188)
T 1vkf_A 142 KVARKI---PGRTVI--AAGLVETEEEARE-ILKHVSAISTSS 178 (188)
T ss_dssp HHHTTS---TTSEEE--EESCCCSHHHHHH-HTTTSSEEEECC
T ss_pred HHHHHh---cCCCEE--EECCcCCHHHHHH-HHCCCeEEEeCC
Confidence 444444 578998 8999999999999 999999999775
No 204
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=97.07 E-value=0.002 Score=56.91 Aligned_cols=117 Identities=17% Similarity=0.248 Sum_probs=67.2
Q ss_pred HHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhc-------cceEeecccChhHHH-------------Hhh---hc----
Q 021575 153 LRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVM-------GDIRVLRNMDDDEVF-------------TFA---KK---- 205 (310)
Q Consensus 153 ~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~-------~~~~~l~~~~~d~~~-------------~~~---~~---- 205 (310)
..+.+.|+|++.+|+..+...+..+.+..++.. ..+.+++.++..++. .++ ++
T Consensus 80 ~~~~~~gad~vTvh~~~G~~~~~~a~~~~~~~~~~~~~~l~~Vt~LTS~~~~~l~~~g~~~~~~~~v~~~A~~a~~~g~~ 159 (239)
T 3tr2_A 80 RAVAELGVWMMNIHISGGRTMMETVVNALQSITLKEKPLLIGVTILTSLDGSDLKTLGIQEKVPDIVCRMATLAKSAGLD 159 (239)
T ss_dssp HHHHHTTCSEEEEEGGGCHHHHHHHHHHHHTCCCSSCCEEEEECSCTTCCHHHHHHTTCCSCHHHHHHHHHHHHHHHTCC
T ss_pred HHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcCcCCCceEEEEEEEeeCCHHHHHhcCCCCCHHHHHHHHHHHHHHcCCC
Confidence 345678999999997654333333444443220 113345555533221 111 11
Q ss_pred --cCCcHHHHHHHhhcCC-CCEEEeCCCCCCCHHH-----------HHHHHHcCCCEEEEccccccCCCHHHHHHHHHHH
Q 021575 206 --IAAPYDLVMQTKQLGR-LPVVHFAAGGVATPAD-----------AAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRA 271 (310)
Q Consensus 206 --~~~~~~~i~~i~~~~~-iPVi~iA~GGI~t~~d-----------~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~ 271 (310)
..++.+ ...+++... -.++ ...||+ +.. ..+++++|+|.+++||+|++++||...++++.+.
T Consensus 160 GvV~s~~e-~~~ir~~~~~~fl~--vtPGIr-~~g~~~~dQ~rv~t~~~~~~aGad~lVvGr~I~~a~dp~~a~~~i~~~ 235 (239)
T 3tr2_A 160 GVVCSAQE-AALLRKQFDRNFLL--VTPGIR-LETDEKGDQKRVMTPRAAIQAGSDYLVIGRPITQSTDPLKALEAIDKD 235 (239)
T ss_dssp EEECCHHH-HHHHHTTCCTTSEE--EECCBC-----------CCBCHHHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHH
T ss_pred EEEECchh-HHHHHHhcCCCcEE--ECCCcC-CCCCCcCcccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHH
Confidence 123333 344555432 2333 257885 332 5577899999999999999999999999888876
Q ss_pred Hh
Q 021575 272 VT 273 (310)
Q Consensus 272 i~ 273 (310)
++
T Consensus 236 i~ 237 (239)
T 3tr2_A 236 IK 237 (239)
T ss_dssp C-
T ss_pred Hh
Confidence 64
No 205
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=97.06 E-value=0.0043 Score=56.17 Aligned_cols=179 Identities=17% Similarity=0.196 Sum_probs=104.5
Q ss_pred cccCCCHHHHHHHHHcCCcEEEecc-C-Cc-cccccc--CCCCCCCCHHHHHHHHhhcCcceeeccccCc------HHHH
Q 021575 39 IMDVVTPEQARVAEEAGACAVMALE-R-VP-ADIRSQ--GGVARMSDPQLIKEIKQSVTIPVMAKARIGH------FVEA 107 (310)
Q Consensus 39 i~~~~~~~~A~~~~~~Ga~~i~~L~-~-~~-~~~~~~--~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~------~~~a 107 (310)
+...-|+-.|+.++++|++++ -+. . .. ...... +...+......++.|.+.+++||++..-.++ ...+
T Consensus 25 ~~~a~D~~sA~i~e~aGf~ai-~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~~~~~v 103 (287)
T 3b8i_A 25 TASVFDPMSARIAADLGFECG-ILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYGNALNVMRTV 103 (287)
T ss_dssp CEECCSHHHHHHHHHTTCSCE-EECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEECTTCSSSHHHHHHHH
T ss_pred EecCCCHHHHHHHHHcCCCEE-EeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHHHH
Confidence 444557788999999999987 221 0 00 000000 0011111234666777888999988644332 3456
Q ss_pred HHHHHcCCCEEEeCCC-------------CCchhHHHHHHh---cC--CCCcEEEe--c--C----CHHHHHHHHHhCCC
Q 021575 108 QILEAIGIDYVDESEV-------------LTPADEENHINK---HN--FRIPFVCG--C--R----NLGEALRRIREGAA 161 (310)
Q Consensus 108 ~~~~~aGad~Vi~~~~-------------~~~~~~~~~i~~---~~--~~i~~~v~--~--~----t~~ea~~~~~~Gad 161 (310)
+.+.++||.+|.+-+. .+..+..+.++. .+ .+..+..- . . ..++++...++|+|
T Consensus 104 ~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~ai~Ra~ay~eAGAd 183 (287)
T 3b8i_A 104 VELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQRTLAYQEAGAD 183 (287)
T ss_dssp HHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechhhhcCHHHHHHHHHHHHHcCCC
Confidence 7788899999952222 122233333332 22 23333332 1 1 12334445677999
Q ss_pred EEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHH
Q 021575 162 MIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMM 241 (310)
Q Consensus 162 ~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~ 241 (310)
.|.+.+. ++.+.++++.+..++|++ +..+|-...-+..++
T Consensus 184 ~i~~e~~---------------------------------------~~~~~~~~i~~~~~~P~i-i~~~g~~~~~~~~eL 223 (287)
T 3b8i_A 184 GICLVGV---------------------------------------RDFAHLEAIAEHLHIPLM-LVTYGNPQLRDDARL 223 (287)
T ss_dssp EEEEECC---------------------------------------CSHHHHHHHHTTCCSCEE-EECTTCGGGCCHHHH
T ss_pred EEEecCC---------------------------------------CCHHHHHHHHHhCCCCEE-EeCCCCCCCCCHHHH
Confidence 8887641 124567778877889998 456664333456777
Q ss_pred HHcCCCEEEEccccccC
Q 021575 242 MQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 242 l~~GadgV~VGsai~~a 258 (310)
-++|+.-|..|..++++
T Consensus 224 ~~lGv~~v~~~~~~~ra 240 (287)
T 3b8i_A 224 ARLGVRVVVNGHAAYFA 240 (287)
T ss_dssp HHTTEEEEECCCHHHHH
T ss_pred HHcCCcEEEEChHHHHH
Confidence 88999999999998873
No 206
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=97.04 E-value=0.0018 Score=60.62 Aligned_cols=125 Identities=21% Similarity=0.219 Sum_probs=82.2
Q ss_pred hcCcceeec--cccCcHHHHHHHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEec--CCHHHHHHHHHhCCCEEEE
Q 021575 90 SVTIPVMAK--ARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGC--RNLGEALRRIREGAAMIRT 165 (310)
Q Consensus 90 ~~~iPv~vk--~~~~~~~~a~~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~--~t~~ea~~~~~~Gad~V~v 165 (310)
.+++|++.- +..+....+..+.++|.=+++.. ..+++++.+.+++...-+...+.. .+.+.+.++.++|+|+|.+
T Consensus 40 ~l~~Pii~ApM~~vte~~lA~A~a~~Gg~gvi~~-~~s~ee~~~~i~~~~~~~~~~~g~~~~~~e~~~~a~~aGvdvI~i 118 (361)
T 3r2g_A 40 TLNLPVISANMDTITESNMANFMHSKGAMGALHR-FMTIEENIQEFKKCKGPVFVSVGCTENELQRAEALRDAGADFFCV 118 (361)
T ss_dssp EESSCEEECCSTTTCSHHHHHHHHHTTCEEBCCS-CSCHHHHHHHHHTCCSCCBEEECSSHHHHHHHHHHHHTTCCEEEE
T ss_pred EcCCCEEECCCCCchHHHHHHHHHHcCCCEEEeC-CCCHHHHHHHHhhcceEEEEEcCCCHHHHHHHHHHHHcCCCEEEE
Confidence 368898763 33345677888888997666533 367778877776532212222222 2346677788899999988
Q ss_pred cCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc-CCCCEEEeCCCCCCCHHHHHHHHHc
Q 021575 166 KGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL-GRLPVVHFAAGGVATPADAAMMMQL 244 (310)
Q Consensus 166 ~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~-~~iPVi~iA~GGI~t~~d~~~~l~~ 244 (310)
+...+.. ...++.++.+++. .++||+ .|+|.|++++..+.++
T Consensus 119 d~a~G~~----------------------------------~~~~e~I~~ir~~~~~~~Vi---~G~V~T~e~A~~a~~a 161 (361)
T 3r2g_A 119 DVAHAHA----------------------------------KYVGKTLKSLRQLLGSRCIM---AGNVATYAGADYLASC 161 (361)
T ss_dssp ECSCCSS----------------------------------HHHHHHHHHHHHHHTTCEEE---EEEECSHHHHHHHHHT
T ss_pred eCCCCCc----------------------------------HhHHHHHHHHHHhcCCCeEE---EcCcCCHHHHHHHHHc
Confidence 6432110 0014456667664 368887 2679999999999999
Q ss_pred CCCEEEEc
Q 021575 245 GCDGVFVG 252 (310)
Q Consensus 245 GadgV~VG 252 (310)
|+|+|.||
T Consensus 162 GaD~I~Vg 169 (361)
T 3r2g_A 162 GADIIKAG 169 (361)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEEc
Confidence 99999995
No 207
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=97.03 E-value=0.0066 Score=51.65 Aligned_cols=102 Identities=14% Similarity=0.133 Sum_probs=68.6
Q ss_pred HHHHHHHHcCCCEEEeC-CCCCchhHHHHHHhc-CCCCcEEE-ecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHH
Q 021575 105 VEAQILEAIGIDYVDES-EVLTPADEENHINKH-NFRIPFVC-GCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 181 (310)
Q Consensus 105 ~~a~~~~~aGad~Vi~~-~~~~~~~~~~~i~~~-~~~i~~~v-~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~ 181 (310)
+.++.+.+.|++.+..+ ......+..+.+++. +.+..+.+ .+++.+++..+.+.|+|++ +++. +.
T Consensus 26 ~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~Gad~i-v~~~-~~---------- 93 (205)
T 1wa3_A 26 EKALAVFEGGVHLIEITFTVPDADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESGAEFI-VSPH-LD---------- 93 (205)
T ss_dssp HHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHTCSEE-ECSS-CC----------
T ss_pred HHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCCCCcEEEecccCCHHHHHHHHHcCCCEE-EcCC-CC----------
Confidence 45677888999999432 222233444555543 33566777 4689999999999999999 6532 11
Q ss_pred HhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEE
Q 021575 182 RSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFV 251 (310)
Q Consensus 182 r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~V 251 (310)
.+.++..++ .++|++ + |+.|+.++.+++++|+|.+-+
T Consensus 94 ----------------------------~~~~~~~~~-~g~~vi--~--g~~t~~e~~~a~~~Gad~vk~ 130 (205)
T 1wa3_A 94 ----------------------------EEISQFCKE-KGVFYM--P--GVMTPTELVKAMKLGHTILKL 130 (205)
T ss_dssp ----------------------------HHHHHHHHH-HTCEEE--C--EECSHHHHHHHHHTTCCEEEE
T ss_pred ----------------------------HHHHHHHHH-cCCcEE--C--CcCCHHHHHHHHHcCCCEEEE
Confidence 112333333 468887 3 778999999999999999875
No 208
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.00 E-value=0.0082 Score=58.54 Aligned_cols=115 Identities=17% Similarity=0.243 Sum_probs=77.6
Q ss_pred CCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhc-CcceeeccccCcHHHHHHHHHcCCCEEEeC
Q 021575 43 VTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSV-TIPVMAKARIGHFVEAQILEAIGIDYVDES 121 (310)
Q Consensus 43 ~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~-~iPv~vk~~~~~~~~a~~~~~aGad~Vi~~ 121 (310)
.+.+.++++.++|++.+ .+|.. .|.. ....+.++++++.+ ++|++++.. ...+.++.+.++|||+|...
T Consensus 231 d~~~~a~~l~~aG~d~I-~id~a-------~g~~-~~~~~~i~~ir~~~p~~~Vi~g~v-~t~e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 231 GNEERVKALVEAGVDVL-LIDSS-------HGHS-EGVLQRIRETRAAYPHLEIIGGNV-ATAEGARALIEAGVSAVKVG 300 (496)
T ss_dssp CCHHHHHHHHHTTCSEE-EEECS-------CTTS-HHHHHHHHHHHHHCTTCCEEEEEE-CSHHHHHHHHHHTCSEEEEC
T ss_pred chHHHHHHHHhccCceE-Eeccc-------cccc-hHHHHHHHHHHHHCCCceEEEccc-CcHHHHHHHHHhCCCEEEEC
Confidence 34688999999999976 55411 0100 11257888999887 899988543 34578999999999999621
Q ss_pred --C-C-----------CCchhHHHHHHh--cCCCCcEEE--ecCCHHHHHHHHHhCCCEEEEcC
Q 021575 122 --E-V-----------LTPADEENHINK--HNFRIPFVC--GCRNLGEALRRIREGAAMIRTKG 167 (310)
Q Consensus 122 --~-~-----------~~~~~~~~~i~~--~~~~i~~~v--~~~t~~ea~~~~~~Gad~V~v~g 167 (310)
. . .+.......+.+ ...++++++ ++.+.+++.++..+||+.|.+..
T Consensus 301 ~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GAd~V~iGs 364 (496)
T 4fxs_A 301 IGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGS 364 (496)
T ss_dssp SSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred CCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCCCeEEecH
Confidence 1 1 111222222222 234688888 59999999999999999998753
No 209
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=96.92 E-value=0.021 Score=55.79 Aligned_cols=40 Identities=30% Similarity=0.419 Sum_probs=32.3
Q ss_pred HHHHHHHhhcC-CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEc
Q 021575 210 YDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLGCDGVFVG 252 (310)
Q Consensus 210 ~~~i~~i~~~~-~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VG 252 (310)
++.++++++.. ++|++ .|+|.+.+++..+.++|+|+|.+|
T Consensus 285 ~~~i~~i~~~~~~~~vi---~g~v~t~e~a~~~~~aGad~i~vg 325 (511)
T 3usb_A 285 IDKVKEVRAKYPSLNII---AGNVATAEATKALIEAGANVVKVG 325 (511)
T ss_dssp HHHHHHHHHHCTTSEEE---EEEECSHHHHHHHHHHTCSEEEEC
T ss_pred hhHHHHHHHhCCCceEE---eeeeccHHHHHHHHHhCCCEEEEC
Confidence 45677776653 57886 388999999999999999999985
No 210
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=96.90 E-value=0.0051 Score=53.81 Aligned_cols=31 Identities=32% Similarity=0.427 Sum_probs=26.2
Q ss_pred CCCEEEeCCCCCCCHHHHHHHHHc---CCC----EEEEcc
Q 021575 221 RLPVVHFAAGGVATPADAAMMMQL---GCD----GVFVGS 253 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~~d~~~~l~~---Gad----gV~VGs 253 (310)
++||- ++|||+|.+|+.+++++ |++ -+-..+
T Consensus 184 ~v~vK--aaGGirt~~~al~~i~a~~~Ga~~~~fRiGtS~ 221 (226)
T 1vcv_A 184 RLGVK--MAGGIRTREQAKAIVDAIGWGEDPARVRLGTST 221 (226)
T ss_dssp CCEEE--EESSCCSHHHHHHHHHHHCSCSCTTTEEEEESC
T ss_pred CceEE--EeCCCCCHHHHHHHHHHHHCCCCcCCceEecCc
Confidence 58998 78999999999999999 999 655443
No 211
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=96.90 E-value=0.0025 Score=56.98 Aligned_cols=26 Identities=27% Similarity=0.379 Sum_probs=22.9
Q ss_pred CCCCEEEeCCCCCCCHHHHHHHHHcCCC
Q 021575 220 GRLPVVHFAAGGVATPADAAMMMQLGCD 247 (310)
Q Consensus 220 ~~iPVi~iA~GGI~t~~d~~~~l~~Gad 247 (310)
.++||- ++|||+|.+|+.+++++|++
T Consensus 197 ~~v~VK--aaGGIrt~~~al~~i~aga~ 222 (260)
T 1p1x_A 197 KTVGFK--PAGGVRTAEDAQKYLAIADE 222 (260)
T ss_dssp TTCEEE--CBSSCCSHHHHHHHHHHHHH
T ss_pred CCceEE--EeCCCCCHHHHHHHHHhhhh
Confidence 468888 89999999999999998765
No 212
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=96.89 E-value=0.013 Score=52.18 Aligned_cols=60 Identities=15% Similarity=0.274 Sum_probs=40.2
Q ss_pred HHHHhhc-CCCCEEEeCCCCCCC-HHHHHHHHHcCCC----E--EEEccccccCCCHHHHHHHHHHHHhcc
Q 021575 213 VMQTKQL-GRLPVVHFAAGGVAT-PADAAMMMQLGCD----G--VFVGSGVFKSGDPVKRAQAIVRAVTHY 275 (310)
Q Consensus 213 i~~i~~~-~~iPVi~iA~GGI~t-~~d~~~~l~~Gad----g--V~VGsai~~a~dp~~~a~~l~~~i~~~ 275 (310)
++.+++. .+.+++.. ||+- ..+..++++.|+| + ++|||.|++++||...++++.+.++..
T Consensus 184 ~~~ir~~~~~~~~l~P---GIg~qg~tp~~a~~~G~d~~~~~~livvGR~I~~A~dp~~aa~~i~~~i~~~ 251 (255)
T 3qw3_A 184 LARVRARAPTLWFLVP---GIGAQGGSLKASLDAGLRADGSGMLINVSRGLARAADPRAAAKELCEEINAI 251 (255)
T ss_dssp HHHHHHHCSSCCEEEC---CC-----CHHHHHHHHCCTTSCCEEEEESHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCeEEEC---CcCCCCCCHHHHHHcCCCcccCeeEEEeChhhcCCCCHHHHHHHHHHHHHHH
Confidence 4445443 34455532 3321 1245555778888 5 999999999999999999998888754
No 213
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=96.88 E-value=0.014 Score=56.73 Aligned_cols=114 Identities=17% Similarity=0.207 Sum_probs=77.4
Q ss_pred HHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhc-CcceeeccccCcHHHHHHHHHcCCCEEEeC--
Q 021575 45 PEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSV-TIPVMAKARIGHFVEAQILEAIGIDYVDES-- 121 (310)
Q Consensus 45 ~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~-~iPv~vk~~~~~~~~a~~~~~aGad~Vi~~-- 121 (310)
.+.++++.++|++.+ .++.. .|.. ....+.++++++.+ ++|++++.. ...+.++.+.++|||+|...
T Consensus 231 ~~~a~~l~~aG~d~I-~id~a-------~g~~-~~~~~~v~~i~~~~p~~~Vi~g~v-~t~e~a~~l~~aGaD~I~vg~g 300 (490)
T 4avf_A 231 GERVAALVAAGVDVV-VVDTA-------HGHS-KGVIERVRWVKQTFPDVQVIGGNI-ATAEAAKALAEAGADAVKVGIG 300 (490)
T ss_dssp HHHHHHHHHTTCSEE-EEECS-------CCSB-HHHHHHHHHHHHHCTTSEEEEEEE-CSHHHHHHHHHTTCSEEEECSS
T ss_pred HHHHHHHhhcccceE-Eeccc-------CCcc-hhHHHHHHHHHHHCCCceEEEeee-CcHHHHHHHHHcCCCEEEECCC
Confidence 478999999999976 55300 1110 11257888899887 889988643 34578999999999999631
Q ss_pred ---C-------C--CCchhHHHHHHh--cCCCCcEEE--ecCCHHHHHHHHHhCCCEEEEcCC
Q 021575 122 ---E-------V--LTPADEENHINK--HNFRIPFVC--GCRNLGEALRRIREGAAMIRTKGE 168 (310)
Q Consensus 122 ---~-------~--~~~~~~~~~i~~--~~~~i~~~v--~~~t~~ea~~~~~~Gad~V~v~g~ 168 (310)
. . .+..+....+.+ ...++++++ ++.+.+++.++..+||+.|.+...
T Consensus 301 ~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GAd~V~vGs~ 363 (490)
T 4avf_A 301 PGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAYCVMMGSM 363 (490)
T ss_dssp CSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTCSEEEECTT
T ss_pred CCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCCCeeeecHH
Confidence 1 1 112222222222 245788888 599999999999999999987643
No 214
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=96.78 E-value=0.015 Score=53.70 Aligned_cols=111 Identities=18% Similarity=0.198 Sum_probs=74.2
Q ss_pred HHHHHHHHcC--CcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEEeCC-
Q 021575 46 EQARVAEEAG--ACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESE- 122 (310)
Q Consensus 46 ~~A~~~~~~G--a~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi~~~- 122 (310)
+.++.+.++| ++++ .+|.. .|. .....+.++.+++.+..|++++..+...++++.+.++|||+|+.+.
T Consensus 109 ~~a~~~~~~g~~~~~i-~i~~~-------~G~-~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~h 179 (336)
T 1ypf_A 109 EFVQQLAAEHLTPEYI-TIDIA-------HGH-SNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGIG 179 (336)
T ss_dssp HHHHHHHHTTCCCSEE-EEECS-------SCC-SHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSS
T ss_pred HHHHHHHhcCCCCCEE-EEECC-------CCC-cHHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEecC
Confidence 5677888999 8886 55411 011 1122578888998886555555434456899999999999996421
Q ss_pred C-C------------C--chhHHHHHHhcCCCCcEEE--ecCCHHHHHHHHHhCCCEEEEc
Q 021575 123 V-L------------T--PADEENHINKHNFRIPFVC--GCRNLGEALRRIREGAAMIRTK 166 (310)
Q Consensus 123 ~-~------------~--~~~~~~~i~~~~~~i~~~v--~~~t~~ea~~~~~~Gad~V~v~ 166 (310)
. . + ..+....+.+ ..++++++ ++.+..++.++..+||+.|.+.
T Consensus 180 gG~~~~~~~~~~~g~~g~~~~~l~~v~~-~~~ipVIa~GGI~~g~Dv~kalalGAdaV~iG 239 (336)
T 1ypf_A 180 PGKVCITKIKTGFGTGGWQLAALRWCAK-AASKPIIADGGIRTNGDVAKSIRFGATMVMIG 239 (336)
T ss_dssp CSTTCHHHHHHSCSSTTCHHHHHHHHHH-TCSSCEEEESCCCSTHHHHHHHHTTCSEEEES
T ss_pred CCceeecccccCcCCchhHHHHHHHHHH-HcCCcEEEeCCCCCHHHHHHHHHcCCCEEEeC
Confidence 1 0 0 1222333322 23788888 6999999999999999999875
No 215
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=96.77 E-value=0.0027 Score=56.15 Aligned_cols=53 Identities=17% Similarity=0.330 Sum_probs=46.7
Q ss_pred CcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHH
Q 021575 208 APYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKR 264 (310)
Q Consensus 208 ~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~ 264 (310)
...++++++.+...+|+- ..|||++.+++.+++.+|||-|++||+.++ ||...
T Consensus 62 ~~~~~i~~i~~~~~~pl~--vGGGIrs~e~~~~~l~~GadkVii~t~a~~--~p~li 114 (243)
T 4gj1_A 62 RQFALIEKLAKEVSVNLQ--VGGGIRSKEEVKALLDCGVKRVVIGSMAIK--DATLC 114 (243)
T ss_dssp CCHHHHHHHHHHCCSEEE--EESSCCCHHHHHHHHHTTCSEEEECTTTTT--CHHHH
T ss_pred hHHHHHHHHHHhcCCCeE--eccccccHHHHHHHHHcCCCEEEEcccccc--CCchH
Confidence 447888888888899998 579999999999999999999999999997 88643
No 216
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=96.77 E-value=0.014 Score=55.27 Aligned_cols=114 Identities=21% Similarity=0.271 Sum_probs=76.6
Q ss_pred CHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEEeC--
Q 021575 44 TPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDES-- 121 (310)
Q Consensus 44 ~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi~~-- 121 (310)
+.+.++.+.++|++.| .++ -. .|.. ....+.++++++.+++|++++.. ...+.++.+.++|||+|...
T Consensus 145 ~~e~~~~lveaGvdvI-vld------ta-~G~~-~~~~e~I~~ik~~~~i~Vi~g~V-~t~e~A~~a~~aGAD~I~vG~g 214 (400)
T 3ffs_A 145 EIERAKLLVEAGVDVI-VLD------SA-HGHS-LNIIRTLKEIKSKMNIDVIVGNV-VTEEATKELIENGADGIKVGIG 214 (400)
T ss_dssp -CHHHHHHHHHTCSEE-EEC------CS-CCSB-HHHHHHHHHHHTTCCCEEEEEEE-CSHHHHHHHHHTTCSEEEECC-
T ss_pred HHHHHHHHHHcCCCEE-EEe------CC-CCCc-ccHHHHHHHHHhcCCCeEEEeec-CCHHHHHHHHHcCCCEEEEeCC
Confidence 3688999999999976 442 01 1110 01157788888888999997543 34588999999999999631
Q ss_pred -------C-----CCCchhHHHHHHh--cCCCCcEEE--ecCCHHHHHHHHHhCCCEEEEcC
Q 021575 122 -------E-----VLTPADEENHINK--HNFRIPFVC--GCRNLGEALRRIREGAAMIRTKG 167 (310)
Q Consensus 122 -------~-----~~~~~~~~~~i~~--~~~~i~~~v--~~~t~~ea~~~~~~Gad~V~v~g 167 (310)
. ..+...+...+.+ ...++++++ ++.+.+++.++..+|++.|.+..
T Consensus 215 ~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~V~vGt 276 (400)
T 3ffs_A 215 PGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGS 276 (400)
T ss_dssp --------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEEEECG
T ss_pred CCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCEEEECh
Confidence 0 0112223333322 235788888 58999999999999999998753
No 217
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=96.76 E-value=0.032 Score=48.24 Aligned_cols=124 Identities=17% Similarity=0.201 Sum_probs=78.8
Q ss_pred HHHHHHhhcCcceeeccccC-cHHHHHHHHHcCCCEEE-eCCCCCchhHHHHHHhcCCCCcEEEe-cCCHHHHHHHHHhC
Q 021575 83 LIKEIKQSVTIPVMAKARIG-HFVEAQILEAIGIDYVD-ESEVLTPADEENHINKHNFRIPFVCG-CRNLGEALRRIREG 159 (310)
Q Consensus 83 ~i~~i~~~~~iPv~vk~~~~-~~~~a~~~~~aGad~Vi-~~~~~~~~~~~~~i~~~~~~i~~~v~-~~t~~ea~~~~~~G 159 (310)
.++.+++.-=+||+...... ..+.++.+.+.|++.+- .-......+..+.+++...++.+..+ +.+.+++..+.++|
T Consensus 9 ~~~~l~~~~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~aG 88 (214)
T 1wbh_A 9 AESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAG 88 (214)
T ss_dssp HHHHHHSCSEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHT
T ss_pred HHHHHHHCCEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCcCCEEeeCEEEEHHHHHHHHHcC
Confidence 44555543335555443322 24567889999999994 33333444555545443345665554 56778999999999
Q ss_pred CCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHH
Q 021575 160 AAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAA 239 (310)
Q Consensus 160 ad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~ 239 (310)
+|++.+.+ + +.+..+..++ ..+|++ + |+.|++++.
T Consensus 89 Ad~v~~p~---~-------------------------------------d~~v~~~~~~-~g~~~i-~---G~~t~~e~~ 123 (214)
T 1wbh_A 89 AQFAISPG---L-------------------------------------TEPLLKAATE-GTIPLI-P---GISTVSELM 123 (214)
T ss_dssp CSCEEESS---C-------------------------------------CHHHHHHHHH-SSSCEE-E---EESSHHHHH
T ss_pred CCEEEcCC---C-------------------------------------CHHHHHHHHH-hCCCEE-E---ecCCHHHHH
Confidence 99985321 0 1122222223 457876 2 599999999
Q ss_pred HHHHcCCCEEEE
Q 021575 240 MMMQLGCDGVFV 251 (310)
Q Consensus 240 ~~l~~GadgV~V 251 (310)
++++.|+|.+.+
T Consensus 124 ~A~~~Gad~v~~ 135 (214)
T 1wbh_A 124 LGMDYGLKEFKF 135 (214)
T ss_dssp HHHHTTCCEEEE
T ss_pred HHHHCCCCEEEE
Confidence 999999999988
No 218
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=96.70 E-value=0.0052 Score=55.39 Aligned_cols=26 Identities=15% Similarity=0.326 Sum_probs=22.8
Q ss_pred CCCCEEEeCCCCCCCHHHHHHHHHcCCC
Q 021575 220 GRLPVVHFAAGGVATPADAAMMMQLGCD 247 (310)
Q Consensus 220 ~~iPVi~iA~GGI~t~~d~~~~l~~Gad 247 (310)
.+++|- ++|||+|.+|+.+++++|++
T Consensus 224 ~~vgVK--aaGGIrt~e~al~~i~aga~ 249 (281)
T 2a4a_A 224 NKIGLK--VSGGISDLNTASHYILLARR 249 (281)
T ss_dssp TCCEEE--EESSCCSHHHHHHHHHHHHH
T ss_pred CCceEE--EeCCCCCHHHHHHHHHHhhh
Confidence 468888 78999999999999998775
No 219
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=96.68 E-value=0.032 Score=48.58 Aligned_cols=124 Identities=17% Similarity=0.157 Sum_probs=78.1
Q ss_pred HHHHHHhhcCcceeeccccC-cHHHHHHHHHcCCCEEE-eCCCCCchhHHHHHHhcCCCCcEEEe-cCCHHHHHHHHHhC
Q 021575 83 LIKEIKQSVTIPVMAKARIG-HFVEAQILEAIGIDYVD-ESEVLTPADEENHINKHNFRIPFVCG-CRNLGEALRRIREG 159 (310)
Q Consensus 83 ~i~~i~~~~~iPv~vk~~~~-~~~~a~~~~~aGad~Vi-~~~~~~~~~~~~~i~~~~~~i~~~v~-~~t~~ea~~~~~~G 159 (310)
.+..+++.-=+||+...... ..+.++.+.+.|++.+- .-......+..+.+++..+++.+.++ +.+.+++..+.++|
T Consensus 19 ~~~~l~~~~ii~V~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~igagtvl~~d~~~~A~~aG 98 (225)
T 1mxs_A 19 IDAICEKARILPVITIAREEDILPLADALAAGGIRTLEVTLRSQHGLKAIQVLREQRPELCVGAGTVLDRSMFAAVEAAG 98 (225)
T ss_dssp HHHHHHHHSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEESSSTHHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHT
T ss_pred HHHHHHHCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEecCCccHHHHHHHHHHhCcccEEeeCeEeeHHHHHHHHHCC
Confidence 34444444345665443322 24667899999999984 32222334455544444456666554 45778999999999
Q ss_pred CCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHH
Q 021575 160 AAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAA 239 (310)
Q Consensus 160 ad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~ 239 (310)
+|++.+ + .. +.+.++ .++...+|++ + |+.|++++.
T Consensus 99 Ad~v~~-p-~~--------------------------------------d~~v~~-~~~~~g~~~i-~---G~~t~~e~~ 133 (225)
T 1mxs_A 99 AQFVVT-P-GI--------------------------------------TEDILE-AGVDSEIPLL-P---GISTPSEIM 133 (225)
T ss_dssp CSSEEC-S-SC--------------------------------------CHHHHH-HHHHCSSCEE-C---EECSHHHHH
T ss_pred CCEEEe-C-CC--------------------------------------CHHHHH-HHHHhCCCEE-E---eeCCHHHHH
Confidence 999953 2 10 111222 2222457876 2 599999999
Q ss_pred HHHHcCCCEEEE
Q 021575 240 MMMQLGCDGVFV 251 (310)
Q Consensus 240 ~~l~~GadgV~V 251 (310)
++++.|+|.|.+
T Consensus 134 ~A~~~Gad~vk~ 145 (225)
T 1mxs_A 134 MGYALGYRRFKL 145 (225)
T ss_dssp HHHTTTCCEEEE
T ss_pred HHHHCCCCEEEE
Confidence 999999999988
No 220
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=96.65 E-value=0.014 Score=53.13 Aligned_cols=177 Identities=16% Similarity=0.113 Sum_probs=96.4
Q ss_pred cccCCCHHHHHHHHHcCCcEEEecc--CCccccccc--CCCCCCCCHHHHHHHHhhcCcceeeccccCc------HHHHH
Q 021575 39 IMDVVTPEQARVAEEAGACAVMALE--RVPADIRSQ--GGVARMSDPQLIKEIKQSVTIPVMAKARIGH------FVEAQ 108 (310)
Q Consensus 39 i~~~~~~~~A~~~~~~Ga~~i~~L~--~~~~~~~~~--~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~------~~~a~ 108 (310)
+...-|+-.|+.++++|++++ -+. ......... +...+......++.|.+.+++||++..-.++ ...++
T Consensus 23 ~~~a~D~~sA~~~~~aG~~ai-~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~v~~~v~ 101 (295)
T 1s2w_A 23 IMEAHNGLSARIVQEAGFKGI-WGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDVPILLDADTGYGNFNNARRLVR 101 (295)
T ss_dssp EEEECSHHHHHHHHHHTCSCE-EECCHHHHHTC---------CHHHHHHHHHHHHTCSSCEEEECCSSCSSHHHHHHHHH
T ss_pred EecCCCHHHHHHHHHcCCCEE-EeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEecCCCCCCCHHHHHHHHH
Confidence 444557788999999999987 221 000000000 0011111234666777888999988654332 34567
Q ss_pred HHHHcCCCEEEeCCC----------------CCchhHHHHHHh---c--CCCCcEEEecCC------HHH----HHHHHH
Q 021575 109 ILEAIGIDYVDESEV----------------LTPADEENHINK---H--NFRIPFVCGCRN------LGE----ALRRIR 157 (310)
Q Consensus 109 ~~~~aGad~Vi~~~~----------------~~~~~~~~~i~~---~--~~~i~~~v~~~t------~~e----a~~~~~ 157 (310)
.+.++||.+|.+-+. .+..+..+.++. . ..+..+..-... .++ ++...+
T Consensus 102 ~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~ay~e 181 (295)
T 1s2w_A 102 KLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGLDEALKRAEAYRN 181 (295)
T ss_dssp HHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCHHHHHHHHHHHHH
T ss_pred HHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccHHHHHHHHHHHHH
Confidence 788999999942111 122233333322 1 233333332211 133 444567
Q ss_pred hCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCC--CCEEEeC-CCCCCC
Q 021575 158 EGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGR--LPVVHFA-AGGVAT 234 (310)
Q Consensus 158 ~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~--iPVi~iA-~GGI~t 234 (310)
+|+|.|.+.+.. ++.+.++++.+..+ +|+++.. .+|-.+
T Consensus 182 AGAd~i~~e~~~--------------------------------------~~~~~~~~i~~~~~~~~P~i~~~~~~~~~~ 223 (295)
T 1s2w_A 182 AGADAILMHSKK--------------------------------------ADPSDIEAFMKAWNNQGPVVIVPTKYYKTP 223 (295)
T ss_dssp TTCSEEEECCCS--------------------------------------SSSHHHHHHHHHHTTCSCEEECCSTTTTSC
T ss_pred cCCCEEEEcCCC--------------------------------------CCHHHHHHHHHHcCCCCCEEEeCCCCCCCC
Confidence 799888875311 11233444544444 8998521 234333
Q ss_pred HHHHHHHHHcCCCEEEEcccccc
Q 021575 235 PADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 235 ~~d~~~~l~~GadgV~VGsai~~ 257 (310)
+.++-++|+.-|..+...++
T Consensus 224 ---~~eL~~lGv~~v~~~~~~~r 243 (295)
T 1s2w_A 224 ---TDHFRDMGVSMVIWANHNLR 243 (295)
T ss_dssp ---HHHHHHHTCCEEEECSHHHH
T ss_pred ---HHHHHHcCCcEEEEChHHHH
Confidence 66767899999999999886
No 221
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=96.58 E-value=0.014 Score=51.72 Aligned_cols=71 Identities=28% Similarity=0.375 Sum_probs=56.7
Q ss_pred CCCHHHHHHHHHcCCcEEEeccCCcccccccCCCC-CCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEE
Q 021575 42 VVTPEQARVAEEAGACAVMALERVPADIRSQGGVA-RMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVD 119 (310)
Q Consensus 42 ~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~-~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi 119 (310)
+.++..++++++.|++.+..+. ...|+. -..+++.++.+++..++||++..+++.-+++..+.+.|+|+|+
T Consensus 143 ~dd~~~akrl~~~G~~aVmPlg-------~pIGsG~Gi~~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~AmeLGAdgVl 214 (265)
T 1wv2_A 143 SDDPIIARQLAEIGCIAVMPLA-------GLIGSGLGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVL 214 (265)
T ss_dssp CSCHHHHHHHHHSCCSEEEECS-------SSTTCCCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHHTCSEEE
T ss_pred CCCHHHHHHHHHhCCCEEEeCC-------ccCCCCCCcCCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 4578999999999999874441 112232 2456899999999899999998888888899999999999996
No 222
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=96.57 E-value=0.027 Score=55.01 Aligned_cols=113 Identities=16% Similarity=0.266 Sum_probs=76.2
Q ss_pred HHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhc-CcceeeccccCcHHHHHHHHHcCCCEEEeC--
Q 021575 45 PEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSV-TIPVMAKARIGHFVEAQILEAIGIDYVDES-- 121 (310)
Q Consensus 45 ~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~-~iPv~vk~~~~~~~~a~~~~~aGad~Vi~~-- 121 (310)
.+.++.+.++|++.+ .++. ..|.. ....+.++.+++.+ ++|++++.. ...+.++.+.++|||+|...
T Consensus 257 ~~~a~~~~~aG~d~v-~i~~-------~~G~~-~~~~~~i~~i~~~~~~~pvi~~~v-~t~~~a~~l~~aGad~I~vg~~ 326 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVI-VLDS-------SQGNS-VYQIAMVHYIKQKYPHLQVIGGNV-VTAAQAKNLIDAGVDGLRVGMG 326 (514)
T ss_dssp HHHHHHHHHTTCSEE-EECC-------SCCCS-HHHHHHHHHHHHHCTTCEEEEEEE-CSHHHHHHHHHHTCSEEEECSS
T ss_pred HHHHHHHHHcCCCEE-Eeec-------cCCcc-hhHHHHHHHHHHhCCCCceEeccc-chHHHHHHHHHcCCCEEEECCC
Confidence 467888999999987 5531 11110 01147888999888 899998643 34578999999999999531
Q ss_pred -C-----------CCCchhHHHHHHh--cCCCCcEEE--ecCCHHHHHHHHHhCCCEEEEcC
Q 021575 122 -E-----------VLTPADEENHINK--HNFRIPFVC--GCRNLGEALRRIREGAAMIRTKG 167 (310)
Q Consensus 122 -~-----------~~~~~~~~~~i~~--~~~~i~~~v--~~~t~~ea~~~~~~Gad~V~v~g 167 (310)
. ..+.......+.+ ...++++++ ++.+..++.++..+|||.|.+..
T Consensus 327 ~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kala~GAd~V~iG~ 388 (514)
T 1jcn_A 327 CGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGASTVMMGS 388 (514)
T ss_dssp CSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred CCcccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHHHcCCCeeeECH
Confidence 1 1111212222222 224678877 58999999999999999998854
No 223
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=96.55 E-value=0.35 Score=42.99 Aligned_cols=177 Identities=13% Similarity=0.072 Sum_probs=102.9
Q ss_pred cccccCCCHHHHHHHHHcCCcEE-EeccCCcccccccCCCCCCCCHHHHHHHH---hhcCcceeeccccCcHHHHHHHHH
Q 021575 37 GVIMDVVTPEQARVAEEAGACAV-MALERVPADIRSQGGVARMSDPQLIKEIK---QSVTIPVMAKARIGHFVEAQILEA 112 (310)
Q Consensus 37 g~i~~~~~~~~A~~~~~~Ga~~i-~~L~~~~~~~~~~~G~~~~~~~~~i~~i~---~~~~iPv~vk~~~~~~~~a~~~~~ 112 (310)
|.+..+.+++.++.+...|+|++ ++++..+.+ .+.++... +..+.|+++........+++.+.+
T Consensus 21 g~~~~~~~p~~~e~a~~~GaD~v~lDlE~~~~~------------~~~~~~~~~a~~~~~~~~~VRv~~~~~~~i~~~l~ 88 (267)
T 2vws_A 21 GLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNT------------IQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLD 88 (267)
T ss_dssp EEEECSCCHHHHHHHHTTCCSEEEEETTTSCCC------------HHHHHHHHHHHTTSSSEEEEECSSCCHHHHHHHHH
T ss_pred EEEEeCCCHHHHHHHHhCCCCEEEEcCCCCCCC------------HHHHHHHHHHHHhCCCcEEEEeCCCCHHHHHHHHH
Confidence 44667788999999999999988 577533221 12222221 234677777665444566788889
Q ss_pred cCCCEEEeCCCCCchhHHHHHHhc-CC-----------------------------CCcEEEecCCHHHHHHHHH----h
Q 021575 113 IGIDYVDESEVLTPADEENHINKH-NF-----------------------------RIPFVCGCRNLGEALRRIR----E 158 (310)
Q Consensus 113 aGad~Vi~~~~~~~~~~~~~i~~~-~~-----------------------------~i~~~v~~~t~~ea~~~~~----~ 158 (310)
+|++.|..+...+..++....+.. ++ .+.+++-+.|.+-+..+.+ -
T Consensus 89 ~g~~~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av~~~~eIa~~~ 168 (267)
T 2vws_A 89 IGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVE 168 (267)
T ss_dssp TTCCEEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHHHTHHHHHTST
T ss_pred hCCCEEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHHHHHHHHhCCC
Confidence 999999877766666665554331 10 1456666777755444332 2
Q ss_pred CCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCc--HHHHHHH---hhcCCCCEEEeCCCCCC
Q 021575 159 GAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAP--YDLVMQT---KQLGRLPVVHFAAGGVA 233 (310)
Q Consensus 159 Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~--~~~i~~i---~~~~~iPVi~iA~GGI~ 233 (310)
|+|.+.+.. .++. .++ ... . +...+ ...++++ ++...+|+.+. . .
T Consensus 169 gvd~l~iG~----~DL~------~~l----g~~-~-----------~~~~p~v~~a~~~iv~aa~aaG~~~~v~--~--~ 218 (267)
T 2vws_A 169 GIDGVFIGP----ADLS------ASL----GYP-D-----------NAGHPEVQRIIETSIRRIRAAGKAAGFL--A--V 218 (267)
T ss_dssp TCCEEEECH----HHHH------HHT----TCS-S-----------SCCTHHHHHHHHHHHHHHHHTTCEEEEE--C--S
T ss_pred CCCEEEECh----HHHH------HHh----CCC-C-----------CCCCHHHHHHHHHHHHHHHHhCCeEEEe--c--C
Confidence 688887642 1211 110 000 0 00001 1222222 22245676543 2 3
Q ss_pred CHHHHHHHHHcCCCEEEEcccc
Q 021575 234 TPADAAMMMQLGCDGVFVGSGV 255 (310)
Q Consensus 234 t~~d~~~~l~~GadgV~VGsai 255 (310)
+++.+..++..|++.+.+|+-.
T Consensus 219 d~~~a~~~~~~G~~~~s~~~d~ 240 (267)
T 2vws_A 219 APDMAQQCLAWGANFVAVGVDT 240 (267)
T ss_dssp SHHHHHHHHHTTCCEEEEEEHH
T ss_pred CHHHHHHHHHCCCCEEEEchHH
Confidence 8999999999999999999743
No 224
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=96.53 E-value=0.032 Score=53.69 Aligned_cols=40 Identities=15% Similarity=0.309 Sum_probs=33.0
Q ss_pred HHHHHHHcCCCE------EEEccccccCCCHHHHHHHHHHHHhccC
Q 021575 237 DAAMMMQLGCDG------VFVGSGVFKSGDPVKRAQAIVRAVTHYS 276 (310)
Q Consensus 237 d~~~~l~~Gadg------V~VGsai~~a~dp~~~a~~l~~~i~~~~ 276 (310)
+..++++.|+|. ++|||.|++++||...++++.+.++...
T Consensus 208 tp~~a~~~g~d~~~~~~livvgR~I~~A~dp~~aa~~i~~~i~~~r 253 (453)
T 3qw4_B 208 SLKASLDAGLRADGSGMLINVSRGLARAADPRAAAKELCEEINAIR 253 (453)
T ss_dssp CHHHHHHHHCCTTSCCEEEEESHHHHSCSCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHhcCCcccCCceEecChhhccCCCHHHHHHHHHHHHHHHH
Confidence 344447778887 9999999999999999999988887653
No 225
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=96.53 E-value=0.031 Score=52.85 Aligned_cols=112 Identities=19% Similarity=0.195 Sum_probs=75.1
Q ss_pred HHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhc-CcceeeccccCcHHHHHHHHHcCCCEEEeC--
Q 021575 45 PEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSV-TIPVMAKARIGHFVEAQILEAIGIDYVDES-- 121 (310)
Q Consensus 45 ~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~-~iPv~vk~~~~~~~~a~~~~~aGad~Vi~~-- 121 (310)
.+.+..+.++|++.+ .+|... |.. ....+.++.+++.+ ++|++++.. ...+.++.+.++|+|+|...
T Consensus 155 ~~~a~~~~~~G~d~i-~i~~~~-------g~~-~~~~e~i~~ir~~~~~~pviv~~v-~~~~~a~~a~~~Gad~I~vg~~ 224 (404)
T 1eep_A 155 IERVEELVKAHVDIL-VIDSAH-------GHS-TRIIELIKKIKTKYPNLDLIAGNI-VTKEAALDLISVGADCLKVGIG 224 (404)
T ss_dssp HHHHHHHHHTTCSEE-EECCSC-------CSS-HHHHHHHHHHHHHCTTCEEEEEEE-CSHHHHHHHHTTTCSEEEECSS
T ss_pred HHHHHHHHHCCCCEE-EEeCCC-------CCh-HHHHHHHHHHHHHCCCCeEEEcCC-CcHHHHHHHHhcCCCEEEECCC
Confidence 467888889999986 554111 110 01246778888888 899997433 34578999999999999641
Q ss_pred ----------C--CCCchhHHHHHHh--cCCCCcEEE--ecCCHHHHHHHHHhCCCEEEEc
Q 021575 122 ----------E--VLTPADEENHINK--HNFRIPFVC--GCRNLGEALRRIREGAAMIRTK 166 (310)
Q Consensus 122 ----------~--~~~~~~~~~~i~~--~~~~i~~~v--~~~t~~ea~~~~~~Gad~V~v~ 166 (310)
. .....+....+.+ ...++++++ ++.+.+++.++..+|+|.|.+.
T Consensus 225 ~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~iG 285 (404)
T 1eep_A 225 PGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIG 285 (404)
T ss_dssp CSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEEC
T ss_pred CCcCcCccccCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhhC
Confidence 1 1112222333332 124678877 5899999999999999999874
No 226
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=96.51 E-value=0.037 Score=51.67 Aligned_cols=124 Identities=17% Similarity=0.225 Sum_probs=76.8
Q ss_pred cCcceeec--cccCcHHHHHHHHHcCCCEEEeCCCCCchhHHHHHHh-c-CCCCcEE--EecCCHHHHHHHHHhCCCEEE
Q 021575 91 VTIPVMAK--ARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINK-H-NFRIPFV--CGCRNLGEALRRIREGAAMIR 164 (310)
Q Consensus 91 ~~iPv~vk--~~~~~~~~a~~~~~aGad~Vi~~~~~~~~~~~~~i~~-~-~~~i~~~--v~~~t~~ea~~~~~~Gad~V~ 164 (310)
.++|++.. ......+.+..+.++|.=.++. ..+++.+..+.+++ . ...+++. +.+++.+.+..+.++|+|+|.
T Consensus 44 l~~Pii~apM~~vt~~~lA~avA~~GGlgii~-~~~s~e~~~~~I~~vk~~~~~pvga~ig~~~~e~a~~l~eaGad~I~ 122 (361)
T 3khj_A 44 LKIPLISSAMDTVTEHLMAVGMARLGGIGIIH-KNMDMESQVNEVLKVKNSGGLRVGAAIGVNEIERAKLLVEAGVDVIV 122 (361)
T ss_dssp ESSSEEECSSTTTCSHHHHHHHHHTTCEEEEC-SSSCHHHHHHHHHHHHHTTCCCCEEEECTTCHHHHHHHHHTTCSEEE
T ss_pred cCCCEEeecCCCCCcHHHHHHHHHcCCCeEEe-cCCCHHHHHHHHHHHHhccCceEEEEeCCCHHHHHHHHHHcCcCeEE
Confidence 47886653 2333445565444455444432 24556655555544 1 1234433 345556778888899999998
Q ss_pred EcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHc
Q 021575 165 TKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQL 244 (310)
Q Consensus 165 v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~ 244 (310)
++...+ +. ....+.++++++..++||++ |++.+++++..+.++
T Consensus 123 ld~a~G--~~--------------------------------~~~~~~i~~i~~~~~~~Viv---g~v~t~e~A~~l~~a 165 (361)
T 3khj_A 123 LDSAHG--HS--------------------------------LNIIRTLKEIKSKMNIDVIV---GNVVTEEATKELIEN 165 (361)
T ss_dssp ECCSCC--SB--------------------------------HHHHHHHHHHHHHCCCEEEE---EEECSHHHHHHHHHT
T ss_pred EeCCCC--Cc--------------------------------HHHHHHHHHHHHhcCCcEEE---ccCCCHHHHHHHHHc
Confidence 764321 10 01134566676656788873 678899999999999
Q ss_pred CCCEEEEc
Q 021575 245 GCDGVFVG 252 (310)
Q Consensus 245 GadgV~VG 252 (310)
|+|+|.+|
T Consensus 166 GaD~I~VG 173 (361)
T 3khj_A 166 GADGIKVG 173 (361)
T ss_dssp TCSEEEEC
T ss_pred CcCEEEEe
Confidence 99999996
No 227
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=96.49 E-value=0.037 Score=51.81 Aligned_cols=124 Identities=15% Similarity=0.184 Sum_probs=76.5
Q ss_pred cCcceeec--cccCcHHHHHHHHHcCCCEEEeCCCCCchhHHHHHHh-cCC-CCcEEEe----cCCHHHHHHHHHhCCCE
Q 021575 91 VTIPVMAK--ARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINK-HNF-RIPFVCG----CRNLGEALRRIREGAAM 162 (310)
Q Consensus 91 ~~iPv~vk--~~~~~~~~a~~~~~aGad~Vi~~~~~~~~~~~~~i~~-~~~-~i~~~v~----~~t~~ea~~~~~~Gad~ 162 (310)
.++|++.. +.....+.+..+.++|.=.++. ..++++++.+.+++ ... .+.+.+. ..+.+.+..+.++|+|+
T Consensus 45 l~~Pii~apM~~vs~~~lA~avA~aGGlg~i~-~~~s~e~~~~~i~~vk~~~~l~vga~vg~~~~~~~~~~~lieaGvd~ 123 (366)
T 4fo4_A 45 LNIPMVSASMDTVTEARLAIALAQEGGIGFIH-KNMSIEQQAAQVHQVKISGGLRVGAAVGAAPGNEERVKALVEAGVDV 123 (366)
T ss_dssp ESSSEEECCCTTTCSHHHHHHHHHTTCEEEEC-SSSCHHHHHHHHHHHHTTTSCCCEEECCSCTTCHHHHHHHHHTTCSE
T ss_pred cCCCEEeCCCCCCChHHHHHHHHHcCCceEee-cCCCHHHHHHHHHHHHhcCceeEEEEeccChhHHHHHHHHHhCCCCE
Confidence 57886653 3333456665555566544442 23566666655554 221 1333332 24567788888999999
Q ss_pred EEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcC-CCCEEEeCCCCCCCHHHHHHH
Q 021575 163 IRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMM 241 (310)
Q Consensus 163 V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~-~iPVi~iA~GGI~t~~d~~~~ 241 (310)
|.++...+.. ....+.++++++.. ++||++ |.+.|++++.++
T Consensus 124 I~idta~G~~----------------------------------~~~~~~I~~ik~~~p~v~Vi~---G~v~t~e~A~~a 166 (366)
T 4fo4_A 124 LLIDSSHGHS----------------------------------EGVLQRIRETRAAYPHLEIIG---GNVATAEGARAL 166 (366)
T ss_dssp EEEECSCTTS----------------------------------HHHHHHHHHHHHHCTTCEEEE---EEECSHHHHHHH
T ss_pred EEEeCCCCCC----------------------------------HHHHHHHHHHHHhcCCCceEe---eeeCCHHHHHHH
Confidence 9875322110 01134566666653 678862 668899999999
Q ss_pred HHcCCCEEEEc
Q 021575 242 MQLGCDGVFVG 252 (310)
Q Consensus 242 l~~GadgV~VG 252 (310)
.++|||+|.+|
T Consensus 167 ~~aGAD~I~vG 177 (366)
T 4fo4_A 167 IEAGVSAVKVG 177 (366)
T ss_dssp HHHTCSEEEEC
T ss_pred HHcCCCEEEEe
Confidence 99999999995
No 228
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=96.49 E-value=0.4 Score=42.24 Aligned_cols=179 Identities=17% Similarity=0.108 Sum_probs=102.0
Q ss_pred cccccCCCHHHHHHHHHcCCcEE-EeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCC
Q 021575 37 GVIMDVVTPEQARVAEEAGACAV-MALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGI 115 (310)
Q Consensus 37 g~i~~~~~~~~A~~~~~~Ga~~i-~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGa 115 (310)
+.+..+.+++.++.+...|+|++ ++++..|.+.... ...+..+ +..+.|+++...-.....++.+.++|+
T Consensus 22 ~~~l~v~~p~~~e~a~~~gaD~v~lDlEd~p~~~~~a--------~~~~~~~-~~~~~~~~VRv~~~~~~~i~~~l~~g~ 92 (256)
T 1dxe_A 22 GCWSALSNPISTEVLGLAGFDWLVLDGEHAPNDISTF--------IPQLMAL-KGSASAPVVRVPTNEPVIIKRLLDIGF 92 (256)
T ss_dssp EEEECSCSHHHHHHHTTSCCSEEEEESSSSSCCHHHH--------HHHHHHT-TTCSSEEEEECSSSCHHHHHHHHHTTC
T ss_pred EEEEeCCCHHHHHHHHhCCCCEEEEcCCCCCCCHHHH--------HHHHHHH-HhCCCcEEEECCCCCHHHHHHHHhcCC
Confidence 34566788999999999999987 5775333221110 1122222 234567777654333345788889999
Q ss_pred CEEEeCCCCCchhHHHHHHhcC-----------------------------CCCcEEEecCCHHHHHHHHH----hCCCE
Q 021575 116 DYVDESEVLTPADEENHINKHN-----------------------------FRIPFVCGCRNLGEALRRIR----EGAAM 162 (310)
Q Consensus 116 d~Vi~~~~~~~~~~~~~i~~~~-----------------------------~~i~~~v~~~t~~ea~~~~~----~Gad~ 162 (310)
++|..+...+..++....+... ..+.+++-+.|.+-+..+.+ -|+|.
T Consensus 93 ~gI~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av~~~~eIa~~~~vd~ 172 (256)
T 1dxe_A 93 YNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVDAIAATEGVDG 172 (256)
T ss_dssp CEEEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHHHTHHHHHTSTTCCE
T ss_pred ceeeecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHHHhHHHHhCCCCCCE
Confidence 9998777666666655443311 13556777777755444332 27888
Q ss_pred EEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCc--HHHHHHH---hhcCCCCEEEeCCCCCCCHHH
Q 021575 163 IRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAP--YDLVMQT---KQLGRLPVVHFAAGGVATPAD 237 (310)
Q Consensus 163 V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~--~~~i~~i---~~~~~iPVi~iA~GGI~t~~d 237 (310)
+.+.. .++. .++- . +. +...+ ...++++ ++...+|+.++ . .+++.
T Consensus 173 l~iG~----~DL~------~~lg----~-~~-----------~~~~p~v~~a~~~iv~aa~a~G~~~~v~--~--~d~~~ 222 (256)
T 1dxe_A 173 IFVGP----SDLA------AALG----H-LG-----------NASHPDVQKAIQHIFNRASAHGKPSGIL--A--PVEAD 222 (256)
T ss_dssp EEECH----HHHH------HHTT----C-TT-----------CTTSHHHHHHHHHHHHHHHHTTCCEEEE--C--CSHHH
T ss_pred EEECh----HHHH------HHhC----C-CC-----------CCCCHHHHHHHHHHHHHHHHhCCceEEe--c--CCHHH
Confidence 87642 1211 1100 0 00 00011 1222222 22246777543 2 27999
Q ss_pred HHHHHHcCCCEEEEccc
Q 021575 238 AAMMMQLGCDGVFVGSG 254 (310)
Q Consensus 238 ~~~~l~~GadgV~VGsa 254 (310)
+..++..|++.+.+|+-
T Consensus 223 ~~~~~~~G~~~~s~~~d 239 (256)
T 1dxe_A 223 ARRYLEWGATFVAVGSD 239 (256)
T ss_dssp HHHHHHTTCCEEEEEEH
T ss_pred HHHHHHcCCCEEEechH
Confidence 99999999999999864
No 229
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=96.49 E-value=0.022 Score=53.04 Aligned_cols=86 Identities=13% Similarity=0.081 Sum_probs=63.4
Q ss_pred CHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEEeCC------C--CCchhHHHHHHh-cCCCCcEEEe--cCC
Q 021575 80 DPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESE------V--LTPADEENHINK-HNFRIPFVCG--CRN 148 (310)
Q Consensus 80 ~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi~~~------~--~~~~~~~~~i~~-~~~~i~~~v~--~~t 148 (310)
+.+.++.+++.+++||++|... ..++++.+.++|+|+|+.+. + ....+....+.+ ....++++++ +++
T Consensus 205 ~w~~i~~lr~~~~~PvivK~v~-~~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~GGI~~ 283 (352)
T 3sgz_A 205 CWNDLSLLQSITRLPIILKGIL-TKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRT 283 (352)
T ss_dssp CHHHHHHHHHHCCSCEEEEEEC-SHHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEESSCCS
T ss_pred CHHHHHHHHHhcCCCEEEEecC-cHHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEECCCCC
Confidence 3478999999999999999864 45889999999999996321 1 122233333322 2335777775 899
Q ss_pred HHHHHHHHHhCCCEEEEc
Q 021575 149 LGEALRRIREGAAMIRTK 166 (310)
Q Consensus 149 ~~ea~~~~~~Gad~V~v~ 166 (310)
.+++.++..+||+.|.+.
T Consensus 284 g~Dv~kaLalGA~aV~iG 301 (352)
T 3sgz_A 284 GTDVLKALALGARCIFLG 301 (352)
T ss_dssp HHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHcCCCEEEEC
Confidence 999999999999999874
No 230
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=96.48 E-value=0.46 Score=42.77 Aligned_cols=177 Identities=12% Similarity=0.058 Sum_probs=102.9
Q ss_pred cccccCCCHHHHHHHHHcCCcEE-EeccCCcccccccCCCCCCCCHHHHHHHH---hhcCcceeeccccCcHHHHHHHHH
Q 021575 37 GVIMDVVTPEQARVAEEAGACAV-MALERVPADIRSQGGVARMSDPQLIKEIK---QSVTIPVMAKARIGHFVEAQILEA 112 (310)
Q Consensus 37 g~i~~~~~~~~A~~~~~~Ga~~i-~~L~~~~~~~~~~~G~~~~~~~~~i~~i~---~~~~iPv~vk~~~~~~~~a~~~~~ 112 (310)
|.+....+++.++.+...|+|++ ++++..+.+ .+.+.... +..+.|+++...-....+++.+.+
T Consensus 42 gl~~~~~~p~~~e~a~~~GaD~v~lDlEh~~~~------------~~~~~~~l~a~~~~~~~~~VRv~~~d~~di~~~ld 109 (287)
T 2v5j_A 42 GLWLGLSSSYSAELLAGAGFDWLLIDGEHAPNN------------VQTVLTQLQAIAPYPSQPVVRPSWNDPVQIKQLLD 109 (287)
T ss_dssp EEEECSCCHHHHHHHHTSCCSEEEEESSSSSCC------------HHHHHHHHHHHTTSSSEEEEECSSSCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHhCCCCEEEEeCCCccch------------HHHHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHh
Confidence 34677889999999999999987 577533221 22333322 234677777654333456788889
Q ss_pred cCCCEEEeCCCCCchhHHHHHHhcC--C----------------------------CCcEEEecCCHHHHHHHHH--h--
Q 021575 113 IGIDYVDESEVLTPADEENHINKHN--F----------------------------RIPFVCGCRNLGEALRRIR--E-- 158 (310)
Q Consensus 113 aGad~Vi~~~~~~~~~~~~~i~~~~--~----------------------------~i~~~v~~~t~~ea~~~~~--~-- 158 (310)
+|++.|..+...+..++....+... + .+.+++-+.|.+-+..+.+ .
T Consensus 110 ~ga~~ImlP~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~av~n~deIaa~~ 189 (287)
T 2v5j_A 110 VGTQTLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAMKNLPQILDVE 189 (287)
T ss_dssp TTCCEEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHHHHHTHHHHHTST
T ss_pred CCCCEEEeCCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHHHHHHHHHHhCcC
Confidence 9999998777766666665554310 0 1456666777755444332 2
Q ss_pred CCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCc--HHHHHHH---hhcCCCCEEEeCCCCCC
Q 021575 159 GAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAP--YDLVMQT---KQLGRLPVVHFAAGGVA 233 (310)
Q Consensus 159 Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~--~~~i~~i---~~~~~iPVi~iA~GGI~ 233 (310)
|+|.+.+.. .++. .++- . +. +...+ ...++++ ++...+|+.++ . .
T Consensus 190 ~vD~l~iG~----~DLs------~~lg----~-~~-----------~~~~p~v~~a~~~iv~aaraaG~~~gv~--~--~ 239 (287)
T 2v5j_A 190 GVDGVFIGP----ADLS------ADMG----Y-AG-----------NPQHPEVQAAIEQAIVQIRESGKAPGIL--I--A 239 (287)
T ss_dssp TEEEEEECH----HHHH------HHTT----S-TT-----------CCCSHHHHHHHHHHHHHHHHTTSEEEEE--C--C
T ss_pred CCCEEEECH----HHHH------HHhC----C-CC-----------CCCCHHHHHHHHHHHHHHHHcCCeeEEe--c--C
Confidence 677776532 1211 1100 0 00 00111 1222222 22245676543 2 3
Q ss_pred CHHHHHHHHHcCCCEEEEcccc
Q 021575 234 TPADAAMMMQLGCDGVFVGSGV 255 (310)
Q Consensus 234 t~~d~~~~l~~GadgV~VGsai 255 (310)
+++.+..++..|++.+.+|+-.
T Consensus 240 d~~~a~~~~~~G~~~~s~~~d~ 261 (287)
T 2v5j_A 240 NEQLAKRYLELGALFVAVGVDT 261 (287)
T ss_dssp CHHHHHHHHHTTCSEEEEEEHH
T ss_pred CHHHHHHHHHhCCCEEEECcHH
Confidence 7999999999999999999743
No 231
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=96.43 E-value=0.045 Score=53.06 Aligned_cols=112 Identities=17% Similarity=0.246 Sum_probs=76.2
Q ss_pred HHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhc-CcceeeccccCcHHHHHHHHHcCCCEEEeCC-
Q 021575 45 PEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSV-TIPVMAKARIGHFVEAQILEAIGIDYVDESE- 122 (310)
Q Consensus 45 ~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~-~iPv~vk~~~~~~~~a~~~~~aGad~Vi~~~- 122 (310)
.+.+..+.++|++.+ .++. ..|. .....+.++.+++.+ ++|++++.. ...++++.+.++|+|+|..+.
T Consensus 239 ~~~a~~l~~aGvd~v-~i~~-------~~G~-~~~~~e~i~~i~~~~p~~pvi~g~~-~t~e~a~~l~~~G~d~I~v~~~ 308 (494)
T 1vrd_A 239 MERVEKLVKAGVDVI-VIDT-------AHGH-SRRVIETLEMIKADYPDLPVVAGNV-ATPEGTEALIKAGADAVKVGVG 308 (494)
T ss_dssp HHHHHHHHHTTCSEE-EECC-------SCCS-SHHHHHHHHHHHHHCTTSCEEEEEE-CSHHHHHHHHHTTCSEEEECSS
T ss_pred HHHHHHHHHhCCCEE-EEEe-------cCCc-hHHHHHHHHHHHHHCCCceEEeCCc-CCHHHHHHHHHcCCCEEEEcCC
Confidence 477888999999987 4320 1111 011257888889888 799988643 345788999999999996321
Q ss_pred -------------CCCchhHHHHHHh--cCCCCcEEE--ecCCHHHHHHHHHhCCCEEEEc
Q 021575 123 -------------VLTPADEENHINK--HNFRIPFVC--GCRNLGEALRRIREGAAMIRTK 166 (310)
Q Consensus 123 -------------~~~~~~~~~~i~~--~~~~i~~~v--~~~t~~ea~~~~~~Gad~V~v~ 166 (310)
..+..+....+.+ ...++++++ ++.+..++.++..+|||.|.+.
T Consensus 309 ~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~GAd~V~iG 369 (494)
T 1vrd_A 309 PGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAESVMVG 369 (494)
T ss_dssp CSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred CCccccccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 1122222222222 234688888 5899999999999999999874
No 232
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=96.42 E-value=0.026 Score=53.10 Aligned_cols=116 Identities=16% Similarity=0.157 Sum_probs=72.7
Q ss_pred HHHHHHHHHcCCcEE-EeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEEeCC-
Q 021575 45 PEQARVAEEAGACAV-MALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESE- 122 (310)
Q Consensus 45 ~~~A~~~~~~Ga~~i-~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi~~~- 122 (310)
.+.++.+.++|++.+ ++.++.. ....+. .. ..+.+.++++.+++||+++.. ...++++.+.++|+|+|....
T Consensus 168 ~e~a~~~~~agad~i~i~~~~~~---~~~~~~-~~-~~~~i~~l~~~~~~pvi~ggi-~t~e~a~~~~~~Gad~i~vg~G 241 (393)
T 2qr6_A 168 REIAPIVIKAGADLLVIQGTLIS---AEHVNT-GG-EALNLKEFIGSLDVPVIAGGV-NDYTTALHMMRTGAVGIIVGGG 241 (393)
T ss_dssp HHHHHHHHHTTCSEEEEECSSCC---SSCCCC-------CHHHHHHHCSSCEEEECC-CSHHHHHHHHTTTCSEEEESCC
T ss_pred HHHHHHHHHCCCCEEEEeCCccc---cccCCC-cc-cHHHHHHHHHhcCCCEEECCc-CCHHHHHHHHHcCCCEEEECCC
Confidence 366788888999987 2332210 011111 00 234578888889999999654 345789999999999996332
Q ss_pred ----------CCCchhHHHHHHh--------cCC-CCcEEEe--cCCHHHHHHHHHhCCCEEEEc
Q 021575 123 ----------VLTPADEENHINK--------HNF-RIPFVCG--CRNLGEALRRIREGAAMIRTK 166 (310)
Q Consensus 123 ----------~~~~~~~~~~i~~--------~~~-~i~~~v~--~~t~~ea~~~~~~Gad~V~v~ 166 (310)
..+..+....+.+ .+. .++++++ +.+..++.++..+|++.|.+.
T Consensus 242 g~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalalGA~~V~iG 306 (393)
T 2qr6_A 242 ENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIACGADAVVLG 306 (393)
T ss_dssp SCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHHTCSEEEEC
T ss_pred cccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 1222222221111 121 2777775 899999999999999999875
No 233
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=96.41 E-value=0.0073 Score=54.85 Aligned_cols=59 Identities=19% Similarity=0.286 Sum_probs=44.3
Q ss_pred HHHhhcCCCCEEEeCCCCCC-CHHH----HHHHHH-cCCCEEEEcccccc--CCCHHHHHHHHHHHHh
Q 021575 214 MQTKQLGRLPVVHFAAGGVA-TPAD----AAMMMQ-LGCDGVFVGSGVFK--SGDPVKRAQAIVRAVT 273 (310)
Q Consensus 214 ~~i~~~~~iPVi~iA~GGI~-t~~d----~~~~l~-~GadgV~VGsai~~--a~dp~~~a~~l~~~i~ 273 (310)
+++.+...+||++ ++|+-. +.++ +..+++ .|+.|+.+|+.+++ ++||..+.+.+...++
T Consensus 230 ~~Vv~a~~vPVVi-aGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNIfQ~~~~dp~~~v~al~~iVH 296 (307)
T 3fok_A 230 ERVMESTTMPTLL-LGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLLYPQDGDVAAAVDTAARLVH 296 (307)
T ss_dssp HHHGGGCSSCEEE-ECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTSSCSSSCHHHHHHHHHHHHC
T ss_pred HHHHHhCCCCEEE-eCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhhccCCCCCHHHHHHHHHHHHH
Confidence 4555556799985 455543 4444 444556 69999999999999 9999999998888886
No 234
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=96.37 E-value=0.033 Score=49.93 Aligned_cols=85 Identities=14% Similarity=0.185 Sum_probs=61.1
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhcc-C-------Chhh
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHY-S-------DPEV 280 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~-~-------~~~~ 280 (310)
..+.++.+++.+++||++ -..|.++.++.++..+|||+|+++.+.+. + ...+++.+..++. + ..+.
T Consensus 108 s~~~L~~ir~~v~lPVl~--Kdfi~d~~qi~ea~~~GAD~VlLi~a~L~---~-~~l~~l~~~a~~lGl~~lvevh~~eE 181 (272)
T 3tsm_A 108 APEFLTAARQACSLPALR--KDFLFDPYQVYEARSWGADCILIIMASVD---D-DLAKELEDTAFALGMDALIEVHDEAE 181 (272)
T ss_dssp CHHHHHHHHHTSSSCEEE--ESCCCSTHHHHHHHHTTCSEEEEETTTSC---H-HHHHHHHHHHHHTTCEEEEEECSHHH
T ss_pred CHHHHHHHHHhcCCCEEE--CCccCCHHHHHHHHHcCCCEEEEcccccC---H-HHHHHHHHHHHHcCCeEEEEeCCHHH
Confidence 455678888888999984 57788999999999999999999998884 3 3445565555443 1 2222
Q ss_pred hhhhhhhcccchhcccCccc
Q 021575 281 LAEVSCGLGEAMVGLNLSDH 300 (310)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~ 300 (310)
+ +....+|..+.|+|.++.
T Consensus 182 l-~~A~~~ga~iIGinnr~l 200 (272)
T 3tsm_A 182 M-ERALKLSSRLLGVNNRNL 200 (272)
T ss_dssp H-HHHTTSCCSEEEEECBCT
T ss_pred H-HHHHhcCCCEEEECCCCC
Confidence 2 234467888999987764
No 235
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=96.27 E-value=0.052 Score=50.44 Aligned_cols=111 Identities=16% Similarity=0.232 Sum_probs=72.3
Q ss_pred HHHHHHHHc--CCcEE-EeccCCcccccccCCCCCCCCHHHHHHHHhhc-CcceeeccccCcHHHHHHHHHcCCCEEEeC
Q 021575 46 EQARVAEEA--GACAV-MALERVPADIRSQGGVARMSDPQLIKEIKQSV-TIPVMAKARIGHFVEAQILEAIGIDYVDES 121 (310)
Q Consensus 46 ~~A~~~~~~--Ga~~i-~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~-~iPv~vk~~~~~~~~a~~~~~aGad~Vi~~ 121 (310)
+.+..+.+. |++.+ ++++ .|.. ....+.++++++.+ ++|++++... ..++++.+.++|+|+|..+
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~---------~g~~-~~~~~~i~~lr~~~~~~~vi~g~v~-t~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVA---------NGYS-EHFVEFVKDVRKRFPQHTIMAGNVV-TGEMVEELILSGADIIKVG 189 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECS---------CTTB-HHHHHHHHHHHHHCTTSEEEEEEEC-SHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhccCCCCEEEEEec---------CCCc-HHHHHHHHHHHHhcCCCeEEEEeCC-CHHHHHHHHHhCCCEEEEC
Confidence 556666666 89876 2331 1110 01146788888888 8999987543 4578999999999999522
Q ss_pred C-C-------------CCchhH-HHHHHh-cCCCCcEEE--ecCCHHHHHHHHHhCCCEEEEcC
Q 021575 122 E-V-------------LTPADE-ENHINK-HNFRIPFVC--GCRNLGEALRRIREGAAMIRTKG 167 (310)
Q Consensus 122 ~-~-------------~~~~~~-~~~i~~-~~~~i~~~v--~~~t~~ea~~~~~~Gad~V~v~g 167 (310)
. . .+.... .+..+. ...++++++ ++.+..++.++..+||+.|.+..
T Consensus 190 ~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlalGA~~V~vG~ 253 (351)
T 2c6q_A 190 IGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGG 253 (351)
T ss_dssp SSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred CCCCcCcCccccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHcCCCceeccH
Confidence 1 1 111111 122111 124688888 69999999999999999998754
No 236
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=96.24 E-value=0.19 Score=44.60 Aligned_cols=176 Identities=18% Similarity=0.129 Sum_probs=95.6
Q ss_pred cccCCCHHHHHHHHHcCCcEEEecc--CCccccccc--CCCCCCCCHHHHHHHHhhcCcceeeccccCc----HHHHHHH
Q 021575 39 IMDVVTPEQARVAEEAGACAVMALE--RVPADIRSQ--GGVARMSDPQLIKEIKQSVTIPVMAKARIGH----FVEAQIL 110 (310)
Q Consensus 39 i~~~~~~~~A~~~~~~Ga~~i~~L~--~~~~~~~~~--~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~----~~~a~~~ 110 (310)
+...-|+-.|+.++++|++++ .+. ......... ....+......++.|++.+++||++..-.++ ...++.+
T Consensus 24 ~~~ayD~~sA~~~~~aG~dai-~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~~~Gyg~~~~~~~~~l 102 (255)
T 2qiw_A 24 LPTVWDTWSAGLVEEAGFSGL-TIGSHPVADATGSSDGENMNFADYMAVVKKITSAVSIPVSVDVESGYGLSPADLIAQI 102 (255)
T ss_dssp CCEESSHHHHHHHHHTTCSCE-EECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHHCSSCEEEECTTCTTCCHHHHHHHH
T ss_pred EecCcCHHHHHHHHHcCCCEE-EEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHhcCCCCEEeccCCCcCcHHHHHHHHH
Confidence 334457788999999999987 221 000000000 0000111134666777888999999754443 4567788
Q ss_pred HHcCCCEEEeCCC--------CCchhHHHHHHh---c----CCCCcEEEecCC-----------HH----HHHHHHHhCC
Q 021575 111 EAIGIDYVDESEV--------LTPADEENHINK---H----NFRIPFVCGCRN-----------LG----EALRRIREGA 160 (310)
Q Consensus 111 ~~aGad~Vi~~~~--------~~~~~~~~~i~~---~----~~~i~~~v~~~t-----------~~----ea~~~~~~Ga 160 (310)
.++||++|.+-+. .+..+..+.++. . +..+.+..-+.. .+ +++...++|+
T Consensus 103 ~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~a~~eAGA 182 (255)
T 2qiw_A 103 LEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIKLMEQAGA 182 (255)
T ss_dssp HHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHHHHHHHTC
T ss_pred HHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHHHHHHHHHcCC
Confidence 8899999942221 223344433332 1 222212221111 12 2333445677
Q ss_pred CEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCH-HHHH
Q 021575 161 AMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATP-ADAA 239 (310)
Q Consensus 161 d~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~-~d~~ 239 (310)
|.|.+.+ .+..+.++++.+..++|+.+....+-.+| -++.
T Consensus 183 d~i~~e~---------------------------------------~~~~~~~~~i~~~~~~P~n~~~~~~~~~p~~~~~ 223 (255)
T 2qiw_A 183 RSVYPVG---------------------------------------LSTAEQVERLVDAVSVPVNITAHPVDGHGAGDLA 223 (255)
T ss_dssp SEEEECC---------------------------------------CCSHHHHHHHHTTCSSCBEEECBTTTBBTTBCHH
T ss_pred cEEEEcC---------------------------------------CCCHHHHHHHHHhCCCCEEEEecCCCCCCCCCHH
Confidence 7776643 12245677787777888875422332112 3455
Q ss_pred HHHHcCCCEEEEccc
Q 021575 240 MMMQLGCDGVFVGSG 254 (310)
Q Consensus 240 ~~l~~GadgV~VGsa 254 (310)
++.++|+.-|..|..
T Consensus 224 eL~~lGv~~v~~~~~ 238 (255)
T 2qiw_A 224 TLAGLGVRRVTFGPL 238 (255)
T ss_dssp HHHHTTCCEEECTTH
T ss_pred HHHHcCCCEEEEHHH
Confidence 667899999999877
No 237
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.21 E-value=0.025 Score=50.17 Aligned_cols=84 Identities=14% Similarity=0.159 Sum_probs=58.0
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhc-cCC-------hhh
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTH-YSD-------PEV 280 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~-~~~-------~~~ 280 (310)
..+.++.+++.+++||+ .-++|.++.++.+++.+|||+|.++.+.+. +. .+++....+. +++ .+.
T Consensus 94 ~~~~l~~i~~~v~lPvl--~kdfI~d~~qi~~a~~~GAD~VlL~~~~l~-~~----l~~l~~~a~~lGl~~lvev~~~~E 166 (254)
T 1vc4_A 94 SLLDLKRVREAVDLPLL--RKDFVVDPFMLEEARAFGASAALLIVALLG-EL----TGAYLEEARRLGLEALVEVHTERE 166 (254)
T ss_dssp CHHHHHHHHHHCCSCEE--EESCCCSHHHHHHHHHTTCSEEEEEHHHHG-GG----HHHHHHHHHHHTCEEEEEECSHHH
T ss_pred CHHHHHHHHHhcCCCEE--ECCcCCCHHHHHHHHHcCCCEEEECccchH-HH----HHHHHHHHHHCCCeEEEEECCHHH
Confidence 35567778778899998 578999999999999999999999999885 32 3344442222 111 222
Q ss_pred hhhhhhhcccchhcccCccc
Q 021575 281 LAEVSCGLGEAMVGLNLSDH 300 (310)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~ 300 (310)
+ +....+|..+.|+|.++.
T Consensus 167 ~-~~a~~~gad~IGvn~~~l 185 (254)
T 1vc4_A 167 L-EIALEAGAEVLGINNRDL 185 (254)
T ss_dssp H-HHHHHHTCSEEEEESBCT
T ss_pred H-HHHHHcCCCEEEEccccC
Confidence 2 234556778888877654
No 238
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=96.09 E-value=0.076 Score=45.49 Aligned_cols=120 Identities=18% Similarity=0.241 Sum_probs=74.6
Q ss_pred HHHHhhcCcceeeccccC-cHHHHHHHHHcCCCEEE-eCCCCCchhHHHHHHhcCCCCcEEEe-cCCHHHHHHHHHhCCC
Q 021575 85 KEIKQSVTIPVMAKARIG-HFVEAQILEAIGIDYVD-ESEVLTPADEENHINKHNFRIPFVCG-CRNLGEALRRIREGAA 161 (310)
Q Consensus 85 ~~i~~~~~iPv~vk~~~~-~~~~a~~~~~aGad~Vi-~~~~~~~~~~~~~i~~~~~~i~~~v~-~~t~~ea~~~~~~Gad 161 (310)
+.+++.-=+|++...... ..+.++.+.+.|++.+- .-......+..+.+++ .++....+ +-+.+++..+.+.|+|
T Consensus 8 ~~l~~~~ii~vi~~~~~~~~~~~~~~l~~gGv~~iel~~k~~~~~~~i~~~~~--~~~~~gag~vl~~d~~~~A~~~GAd 85 (207)
T 2yw3_A 8 AVLAESRLLPLLTVRGGEDLLGLARVLEEEGVGALEITLRTEKGLEALKALRK--SGLLLGAGTVRSPKEAEAALEAGAA 85 (207)
T ss_dssp HHHHHHCEEEEECCCSCCCHHHHHHHHHHTTCCEEEEECSSTHHHHHHHHHTT--SSCEEEEESCCSHHHHHHHHHHTCS
T ss_pred HHHHhCCEEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHhC--CCCEEEeCeEeeHHHHHHHHHcCCC
Confidence 334433334444333322 24667888999999994 3222233455555544 55666555 4466889999999999
Q ss_pred EEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHH
Q 021575 162 MIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMM 241 (310)
Q Consensus 162 ~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~ 241 (310)
++.... . +.+.++..++ ..+|++ + |+.|++++.++
T Consensus 86 ~v~~~~--~--------------------------------------d~~v~~~~~~-~g~~~i-~---G~~t~~e~~~A 120 (207)
T 2yw3_A 86 FLVSPG--L--------------------------------------LEEVAALAQA-RGVPYL-P---GVLTPTEVERA 120 (207)
T ss_dssp EEEESS--C--------------------------------------CHHHHHHHHH-HTCCEE-E---EECSHHHHHHH
T ss_pred EEEcCC--C--------------------------------------CHHHHHHHHH-hCCCEE-e---cCCCHHHHHHH
Confidence 985321 0 1122232333 356776 2 58999999999
Q ss_pred HHcCCCEEEE
Q 021575 242 MQLGCDGVFV 251 (310)
Q Consensus 242 l~~GadgV~V 251 (310)
.+.|+|.+.+
T Consensus 121 ~~~Gad~v~~ 130 (207)
T 2yw3_A 121 LALGLSALKF 130 (207)
T ss_dssp HHTTCCEEEE
T ss_pred HHCCCCEEEE
Confidence 9999999987
No 239
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=96.04 E-value=0.0078 Score=54.13 Aligned_cols=83 Identities=11% Similarity=0.141 Sum_probs=59.2
Q ss_pred ccCCCHHHH--HHHHHcCCc---EEEeccCCcccccccCCCCCCCCHHHHHHHHhhc--CcceeeccccCcHHHHHHHHH
Q 021575 40 MDVVTPEQA--RVAEEAGAC---AVMALERVPADIRSQGGVARMSDPQLIKEIKQSV--TIPVMAKARIGHFVEAQILEA 112 (310)
Q Consensus 40 ~~~~~~~~A--~~~~~~Ga~---~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~--~iPv~vk~~~~~~~~a~~~~~ 112 (310)
.+.++++.| .+|..+|++ .+++|+.. . +..+++.++++++.+ ++|+++...+...++++.+.+
T Consensus 178 ~~~~~~e~A~~~aYa~~gad~G~~lV~LD~~---------~-~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~ 247 (286)
T 3vk5_A 178 VPVSTASTEEIDRYLHVARAFGFHMVYLYSR---------N-EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLD 247 (286)
T ss_dssp CCCCCSSSHHHHHHHHHHHHTTCSEEEEECS---------S-SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHcCCCEEEEcCC---------C-CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHH
Confidence 344556666 666665554 45677411 1 345589999999999 899999998888899999999
Q ss_pred cCCCEEE-eCCCCCc--hhHHHH
Q 021575 113 IGIDYVD-ESEVLTP--ADEENH 132 (310)
Q Consensus 113 aGad~Vi-~~~~~~~--~~~~~~ 132 (310)
+|||.|+ ++..... .++.+.
T Consensus 248 aGAD~VVVGSAav~d~~Pelv~e 270 (286)
T 3vk5_A 248 SGADYVGFAGALEQPDWRSALAE 270 (286)
T ss_dssp TTCSEEEESGGGSSTTHHHHHHH
T ss_pred cCCCEEEECchhhcCCCHHHHHH
Confidence 9999996 5555555 455433
No 240
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=95.88 E-value=0.054 Score=48.86 Aligned_cols=21 Identities=24% Similarity=0.352 Sum_probs=18.1
Q ss_pred CCCEEEeCC-CCCCCHHHHHHHHH
Q 021575 221 RLPVVHFAA-GGVATPADAAMMMQ 243 (310)
Q Consensus 221 ~iPVi~iA~-GGI~t~~d~~~~l~ 243 (310)
++.|= |+ |||+|.+|+.++++
T Consensus 231 ~vgvK--As~GGIrt~e~A~~~i~ 252 (297)
T 4eiv_A 231 CIGIK--IEVGDVHMAETADFLMQ 252 (297)
T ss_dssp CCEEE--EECTTCCHHHHHHHHHH
T ss_pred ceeEE--ecCCCCCCHHHHHHHHH
Confidence 45666 78 99999999999998
No 241
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=95.75 E-value=0.087 Score=48.93 Aligned_cols=59 Identities=22% Similarity=0.341 Sum_probs=41.3
Q ss_pred HHHHhhc-CCCCEEEeCCCCCCC-HHHHHHHHHcCCC------EEEEccccccCCCHHHHHHHHHHHHhc
Q 021575 213 VMQTKQL-GRLPVVHFAAGGVAT-PADAAMMMQLGCD------GVFVGSGVFKSGDPVKRAQAIVRAVTH 274 (310)
Q Consensus 213 i~~i~~~-~~iPVi~iA~GGI~t-~~d~~~~l~~Gad------gV~VGsai~~a~dp~~~a~~l~~~i~~ 274 (310)
++.+++. .+.+++. -||+- ..|..++++.|+| .++|||+|++++||...++++.+.++.
T Consensus 280 l~~IR~~~~~~~iLt---PGIgaqGGD~~~a~~~Gad~~~~~~iIvVGR~I~~A~dp~~AA~~i~~ei~~ 346 (353)
T 2ffc_A 280 IKKIRELFPDCYILA---PGVGAQKGDLRKMLCNGYSKNYEKVLINVGRAITKSGSPQQAAREYHQQIKE 346 (353)
T ss_dssp HHHHHHHCTTCCEEE---CCBSTTCBCHHHHHHHHCCSSGGGEEEEECHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCeEEe---CcccCCCCCHHHHHHcCCCcccCcEEEEECHHHcCCCCHHHHHHHHHHHHHH
Confidence 3444432 3556653 34421 1245556778898 899999999999999999999998864
No 242
>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel, unusual catalysis, disease mutati glycosyltransferase, lyase, multifunctional enzyme; HET: U1P; 1.10A {Homo sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A* 3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A* 3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3l0k_A* 3l0n_A* ...
Probab=95.74 E-value=0.034 Score=49.58 Aligned_cols=34 Identities=24% Similarity=0.459 Sum_probs=29.5
Q ss_pred HHHHH-HcCCCEEEEccccccCCCHHHHHHHHHHH
Q 021575 238 AAMMM-QLGCDGVFVGSGVFKSGDPVKRAQAIVRA 271 (310)
Q Consensus 238 ~~~~l-~~GadgV~VGsai~~a~dp~~~a~~l~~~ 271 (310)
..+++ +.|+|.++|||.|++++||...++++++.
T Consensus 215 p~~a~~~aGad~iVvGR~I~~a~dp~~a~~~~~~~ 249 (260)
T 3eww_A 215 PQEVIGKRGSDIIIVGRGIISAADRLEAAEMYRKA 249 (260)
T ss_dssp HHHHHTTSCCSEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEChhhcCCCCHHHHHHHHHHH
Confidence 55557 89999999999999999999999888753
No 243
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=95.71 E-value=0.14 Score=46.23 Aligned_cols=177 Identities=18% Similarity=0.178 Sum_probs=97.8
Q ss_pred cccCCCHHHHHHHHHcCCcEEEecc--CCccccccc--CCCCCCCCHHHHHHHHhhcCcceeeccccCc------HHHHH
Q 021575 39 IMDVVTPEQARVAEEAGACAVMALE--RVPADIRSQ--GGVARMSDPQLIKEIKQSVTIPVMAKARIGH------FVEAQ 108 (310)
Q Consensus 39 i~~~~~~~~A~~~~~~Ga~~i~~L~--~~~~~~~~~--~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~------~~~a~ 108 (310)
+...-|+-.|+.++++|++++ -+. ......... +...+......++.|.+.+++||++..-.++ ...++
T Consensus 19 ~~~a~D~~sA~~~~~aG~~ai-~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~v~ 97 (290)
T 2hjp_A 19 AMAAHNPLVAKLAEQAGFGGI-WGSGFELSASYAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTGFGNAVNVHYVVP 97 (290)
T ss_dssp EEECSSHHHHHHHHHHTCSEE-EECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTTTSSHHHHHHHHH
T ss_pred EecCCCHHHHHHHHHcCCCEE-EEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHHHHH
Confidence 444557788999999999987 221 000000000 0010111234666777888999988644332 35567
Q ss_pred HHHHcCCCEEEeCCC---------------C-CchhHHHHHHh---c--CCCCcEEEecCC------HHH----HHHHHH
Q 021575 109 ILEAIGIDYVDESEV---------------L-TPADEENHINK---H--NFRIPFVCGCRN------LGE----ALRRIR 157 (310)
Q Consensus 109 ~~~~aGad~Vi~~~~---------------~-~~~~~~~~i~~---~--~~~i~~~v~~~t------~~e----a~~~~~ 157 (310)
.+.++||.+|.+-+. + +..+..+.++. . ..+..+..-... .++ ++...+
T Consensus 98 ~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~ay~e 177 (290)
T 2hjp_A 98 QYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQEAVRRGQAYEE 177 (290)
T ss_dssp HHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHHHHHHHHHHHHH
T ss_pred HHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHHHHHHHHHHHHH
Confidence 788899999942111 2 22233333332 1 123333332221 233 344457
Q ss_pred hCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCC--CCEEEeC-CCCCCC
Q 021575 158 EGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGR--LPVVHFA-AGGVAT 234 (310)
Q Consensus 158 ~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~--iPVi~iA-~GGI~t 234 (310)
+|+|.|.+.+.. ++.+.++++.+..+ +|+++.. ++..-
T Consensus 178 AGAd~i~~e~~~--------------------------------------~~~~~~~~i~~~~~~~vP~i~n~~~~~~~- 218 (290)
T 2hjp_A 178 AGADAILIHSRQ--------------------------------------KTPDEILAFVKSWPGKVPLVLVPTAYPQL- 218 (290)
T ss_dssp TTCSEEEECCCC--------------------------------------SSSHHHHHHHHHCCCSSCEEECGGGCTTS-
T ss_pred cCCcEEEeCCCC--------------------------------------CCHHHHHHHHHHcCCCCCEEEeccCCCCC-
Confidence 799988876521 11234555666566 8998421 12222
Q ss_pred HHHHHHHHHcC-CCEEEEcccccc
Q 021575 235 PADAAMMMQLG-CDGVFVGSGVFK 257 (310)
Q Consensus 235 ~~d~~~~l~~G-adgV~VGsai~~ 257 (310)
+..++-++| +.-|..|..+++
T Consensus 219 --~~~eL~~lG~v~~v~~~~~~~r 240 (290)
T 2hjp_A 219 --TEADIAALSKVGIVIYGNHAIR 240 (290)
T ss_dssp --CHHHHHTCTTEEEEEECSHHHH
T ss_pred --CHHHHHhcCCeeEEEechHHHH
Confidence 456667899 999999999886
No 244
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=95.65 E-value=0.78 Score=41.58 Aligned_cols=178 Identities=16% Similarity=0.091 Sum_probs=95.3
Q ss_pred ccCCCHHHHHHHHHcCCcEEEe--ccCCcccccccCCCCCCCC---HHHHHHHHhhc-CcceeeccccCc------HHHH
Q 021575 40 MDVVTPEQARVAEEAGACAVMA--LERVPADIRSQGGVARMSD---PQLIKEIKQSV-TIPVMAKARIGH------FVEA 107 (310)
Q Consensus 40 ~~~~~~~~A~~~~~~Ga~~i~~--L~~~~~~~~~~~G~~~~~~---~~~i~~i~~~~-~iPv~vk~~~~~------~~~a 107 (310)
..+-|.-.|+.++++|++++.. ..-.......... ..... ...++.|++.. ++||++..-.++ ...+
T Consensus 23 ~~a~D~~sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~-~~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg~~~~v~~tv 101 (302)
T 3fa4_A 23 PGVYDGLSARVALSAGFDALYMTGAGTAASVHGQADL-GICTLNDMRANAEMISNISPSTPVIADADTGYGGPIMVARTT 101 (302)
T ss_dssp EEECSHHHHHHHHTTTCSCEEECHHHHHHHHHSCCSS-SCCCHHHHHHHHHHHHTTSTTSCEEEECTTTTSSHHHHHHHH
T ss_pred ecCcCHHHHHHHHHcCCCEEEeCcHHHHHHHcCCCCC-CcCCHHHHHHHHHHHHhhccCCCEEEECCCCCCCHHHHHHHH
Confidence 4566788899999999998721 1000000000000 01111 23555666654 899999754442 2456
Q ss_pred HHHHHcCCCEEEeCCC--------------CCchhHHHHHHh-------cCCCCcEEEecCCH-----HHH----HHHHH
Q 021575 108 QILEAIGIDYVDESEV--------------LTPADEENHINK-------HNFRIPFVCGCRNL-----GEA----LRRIR 157 (310)
Q Consensus 108 ~~~~~aGad~Vi~~~~--------------~~~~~~~~~i~~-------~~~~i~~~v~~~t~-----~ea----~~~~~ 157 (310)
+.+.++|+.+|.+-+. .+..+....++. .+.++.+++-+... +++ +...+
T Consensus 102 ~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~e 181 (302)
T 3fa4_A 102 EQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEESVARLRAARD 181 (302)
T ss_dssp HHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHHHHHHHHHHHHT
T ss_pred HHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHHHHHHHHHHHHH
Confidence 7888899999942221 123343333322 13444444433322 332 22345
Q ss_pred hCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcC-CCCEEE-eCCCCCCCH
Q 021575 158 EGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG-RLPVVH-FAAGGVATP 235 (310)
Q Consensus 158 ~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~-~iPVi~-iA~GGI~t~ 235 (310)
+|+|.|.+.+.. +.+.++++++.. ..|+++ +..+|-...
T Consensus 182 AGAD~ifi~g~~---------------------------------------~~~ei~~~~~~~~~~Pl~~n~~~~g~~p~ 222 (302)
T 3fa4_A 182 AGADVGFLEGIT---------------------------------------SREMARQVIQDLAGWPLLLNMVEHGATPS 222 (302)
T ss_dssp TTCSEEEETTCC---------------------------------------CHHHHHHHHHHTTTSCEEEECCTTSSSCC
T ss_pred cCCCEEeecCCC---------------------------------------CHHHHHHHHHHhcCCceeEEEecCCCCCC
Confidence 688888776421 123345555544 368754 123442211
Q ss_pred HHHHHHHHcCCCEEEEcccccc
Q 021575 236 ADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 236 ~d~~~~l~~GadgV~VGsai~~ 257 (310)
-...++.++|+.-|+.+..+++
T Consensus 223 ~~~~eL~~lGv~~v~~~~~~~r 244 (302)
T 3fa4_A 223 ISAAEAKEMGFRIIIFPFAALG 244 (302)
T ss_dssp CCHHHHHHHTCSEEEETTTTHH
T ss_pred CCHHHHHHcCCCEEEEchHHHH
Confidence 2455667889999999998886
No 245
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=95.64 E-value=0.74 Score=41.45 Aligned_cols=193 Identities=15% Similarity=0.174 Sum_probs=115.4
Q ss_pred ccCCCHHH----HHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHh--hcCcceeeccccC-cHHHHHHHHH
Q 021575 40 MDVVTPEQ----ARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQ--SVTIPVMAKARIG-HFVEAQILEA 112 (310)
Q Consensus 40 ~~~~~~~~----A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~--~~~iPv~vk~~~~-~~~~a~~~~~ 112 (310)
.++.+.+. .+++++.+..-|+++.+. ..+...|.. .....++.+.+ ..++||.+.+--+ +++.+..+.+
T Consensus 26 fNv~n~e~~~avi~AAee~~sPvIlq~s~~--~~~~~~g~~--~~~~~v~~~A~~~~~~VPValHlDHg~~~e~i~~ai~ 101 (288)
T 3q94_A 26 FNMNNLEWTQAILAAAEEEKSPVILGVSEG--AARHMTGFK--TVVAMVKALIEEMNITVPVAIHLDHGSSFEKCKEAID 101 (288)
T ss_dssp EECCSHHHHHHHHHHHHHTTCCEEEEEEHH--HHHHTSCHH--HHHHHHHHHHHHTTCCSCEEEEEEEECSHHHHHHHHH
T ss_pred EeeCCHHHHHHHHHHHHHhCCCEEEECChh--hhhhcCCHH--HHHHHHHHHHHhcCCCCcEEEECCCCCCHHHHHHHHH
Confidence 34555654 445577888876666211 111101110 01244555666 6899999864333 5788899999
Q ss_pred cCCCEEE--eCCCCCch-------hHHHHHHhcCCCCcEEE-----------------ecCCHHHHHHHH-HhCCCEEEE
Q 021575 113 IGIDYVD--ESEVLTPA-------DEENHINKHNFRIPFVC-----------------GCRNLGEALRRI-REGAAMIRT 165 (310)
Q Consensus 113 aGad~Vi--~~~~~~~~-------~~~~~i~~~~~~i~~~v-----------------~~~t~~ea~~~~-~~Gad~V~v 165 (310)
+|.+-|- .+. ++.+ ++.++..+ .++.+=. -.++++++.+-. +.|+|.+.+
T Consensus 102 ~GFtSVMiDgS~-~p~eeNi~~Tk~vv~~ah~--~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~LAv 178 (288)
T 3q94_A 102 AGFTSVMIDASH-HPFEENVETTKKVVEYAHA--RNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEATGIDCLAP 178 (288)
T ss_dssp HTCSEEEECCTT-SCHHHHHHHHHHHHHHHHT--TTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEEEE
T ss_pred cCCCeEEEeCCC-CCHHHHHHHHHHHHHHHHH--cCCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHHHHCCCEEEE
Confidence 9999993 333 2322 33333332 2221110 136789998866 689999876
Q ss_pred cCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC
Q 021575 166 KGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG 245 (310)
Q Consensus 166 ~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G 245 (310)
.-..--| .++. ...-+++.++++++.+++|++.=.+.|+ ..+++.++++.|
T Consensus 179 aiGt~HG-----------------~Y~~-----------~p~Ld~~~L~~I~~~v~vpLVlHGgSG~-~~e~i~~ai~~G 229 (288)
T 3q94_A 179 ALGSVHG-----------------PYKG-----------EPNLGFAEMEQVRDFTGVPLVLHGGTGI-PTADIEKAISLG 229 (288)
T ss_dssp CSSCBSS-----------------CCSS-----------SCCCCHHHHHHHHHHHCSCEEECCCTTC-CHHHHHHHHHTT
T ss_pred EcCcccC-----------------CcCC-----------CCccCHHHHHHHHHhcCCCEEEeCCCCC-CHHHHHHHHHcC
Confidence 4211101 1110 1234588899998888899886456677 578999999999
Q ss_pred CCEEEEccccccCCCHHHHHHHHHHHHh
Q 021575 246 CDGVFVGSGVFKSGDPVKRAQAIVRAVT 273 (310)
Q Consensus 246 adgV~VGsai~~a~dp~~~a~~l~~~i~ 273 (310)
..=|=+++.+-. ...+.+++.+.
T Consensus 230 v~KiNi~Tdl~~-----a~~~~~r~~~~ 252 (288)
T 3q94_A 230 TSKINVNTENQI-----EFTKAVREVLN 252 (288)
T ss_dssp EEEEEECHHHHH-----HHHHHHHHHHH
T ss_pred CeEEEEChHHHH-----HHHHHHHHHHH
Confidence 999999988763 34444555443
No 246
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=95.53 E-value=0.013 Score=52.16 Aligned_cols=57 Identities=18% Similarity=0.155 Sum_probs=45.7
Q ss_pred HHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCC-----HHHHHHHHHHHHh
Q 021575 210 YDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGD-----PVKRAQAIVRAVT 273 (310)
Q Consensus 210 ~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~d-----p~~~a~~l~~~i~ 273 (310)
.+.++++.+...+|+. ..|||++. ++.+++ +||+-|++||+.++ | | ...+++.+.+.
T Consensus 65 ~~~i~~i~~~~~~pv~--vgGGir~~-~~~~~l-~Ga~~Viigs~a~~--~~g~~~p-~~~~~~~~~~g 126 (260)
T 2agk_A 65 DDAAREALQESPQFLQ--VGGGINDT-NCLEWL-KWASKVIVTSWLFT--KEGHFQL-KRLERLTELCG 126 (260)
T ss_dssp HHHHHHHHHHSTTTSE--EESSCCTT-THHHHT-TTCSCEEECGGGBC--TTCCBCH-HHHHHHHHHHC
T ss_pred HHHHHHHHhcCCceEE--EeCCCCHH-HHHHHh-cCCCEEEECcHHHh--hcCCCCH-HHHHHHHHHhC
Confidence 5567777777789998 47999987 999999 99999999999997 6 7 45455666653
No 247
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=95.49 E-value=0.036 Score=49.31 Aligned_cols=38 Identities=26% Similarity=0.359 Sum_probs=30.3
Q ss_pred CCCEEEeCCCCCCCHHHHHHHH-HcCCCEEEEccccccCCCH
Q 021575 221 RLPVVHFAAGGVATPADAAMMM-QLGCDGVFVGSGVFKSGDP 261 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~~d~~~~l-~~GadgV~VGsai~~a~dp 261 (310)
+++|+ -.|+| +++++.+++ ..+.||++||++-++++++
T Consensus 202 ~vrIl--YGGSV-~~~N~~~l~~~~diDG~LVGgAsL~a~~F 240 (259)
T 2i9e_A 202 SIRIQ--YGGSV-TAANCKELASQPDIDGFLVGGASLKPEFV 240 (259)
T ss_dssp HCEEE--ECSCC-CTTTHHHHHTSTTCCEEEESGGGGSTHHH
T ss_pred cccEE--EcCCC-CHhhHHHHhcCCCCCeeeechHhhChHHH
Confidence 47888 46888 588888877 6799999999999985553
No 248
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=95.44 E-value=0.074 Score=47.26 Aligned_cols=70 Identities=21% Similarity=0.250 Sum_probs=55.1
Q ss_pred CCHHHHHHHHHcCCcEEEeccCCcccccccCCCCC-CCCHHHHHHHHh-hcC-cceeeccccCcHHHHHHHHHcCCCEEE
Q 021575 43 VTPEQARVAEEAGACAVMALERVPADIRSQGGVAR-MSDPQLIKEIKQ-SVT-IPVMAKARIGHFVEAQILEAIGIDYVD 119 (310)
Q Consensus 43 ~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~-~~~~~~i~~i~~-~~~-iPv~vk~~~~~~~~a~~~~~aGad~Vi 119 (310)
.|+..++++++.|++.+..+. ..-|+.. ..+++.++.+++ ..+ +||++...++.-+++..+.+.|+|+|+
T Consensus 133 ~D~~~ak~l~~~G~~aVmPlg-------~pIGsG~Gi~~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVl 205 (268)
T 2htm_A 133 PDLVLAKRLAALGTATVMPLA-------APIGSGWGVRTRALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVL 205 (268)
T ss_dssp SCHHHHHHHHHHTCSCBEEBS-------SSTTTCCCSTTHHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHHhcCCCEEEecC-------ccCcCCcccCCHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 578999999999999875441 1122322 446888999988 678 999998888877899999999999996
No 249
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=95.43 E-value=0.3 Score=44.71 Aligned_cols=117 Identities=20% Similarity=0.183 Sum_probs=75.5
Q ss_pred cCcceeec--cccCcHHHHHHHHHcCCCEEEeCCCCCchhHHHHHHh-cC-CCCcEEEe--c--CC-HHHHHHHHHhCCC
Q 021575 91 VTIPVMAK--ARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINK-HN-FRIPFVCG--C--RN-LGEALRRIREGAA 161 (310)
Q Consensus 91 ~~iPv~vk--~~~~~~~~a~~~~~aGad~Vi~~~~~~~~~~~~~i~~-~~-~~i~~~v~--~--~t-~~ea~~~~~~Gad 161 (310)
...|++.. ..+...+.+..+.++|.-+++.....++.++.+.+++ .. .+.++.+. + .+ .+.+..+.+.|++
T Consensus 25 ~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~~~~p~gVnl~~~~~~~~~~~~~~~~~g~d 104 (326)
T 3bo9_A 25 IEHPILMGGMAWAGTPTLAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQKTDKPFGVNIILVSPWADDLVKVCIEEKVP 104 (326)
T ss_dssp CSSSEEECCCTTTSCHHHHHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTTCSSCEEEEEETTSTTHHHHHHHHHHTTCS
T ss_pred CCCCEEECCCCCCCCHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcCCCEEEEEeccCCCHHHHHHHHHHCCCC
Confidence 57888763 2333567888889999888875555566666555544 21 23444443 2 12 3445556688999
Q ss_pred EEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHH
Q 021575 162 MIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMM 241 (310)
Q Consensus 162 ~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~ 241 (310)
+|.++... |.+.++.+++ ..+|++ .++.+++++.++
T Consensus 105 ~V~l~~g~---------------------------------------p~~~~~~l~~-~g~~v~----~~v~s~~~a~~a 140 (326)
T 3bo9_A 105 VVTFGAGN---------------------------------------PTKYIRELKE-NGTKVI----PVVASDSLARMV 140 (326)
T ss_dssp EEEEESSC---------------------------------------CHHHHHHHHH-TTCEEE----EEESSHHHHHHH
T ss_pred EEEECCCC---------------------------------------cHHHHHHHHH-cCCcEE----EEcCCHHHHHHH
Confidence 99876421 1234455555 356776 367889999999
Q ss_pred HHcCCCEEEE
Q 021575 242 MQLGCDGVFV 251 (310)
Q Consensus 242 l~~GadgV~V 251 (310)
.+.|+|++++
T Consensus 141 ~~~GaD~i~v 150 (326)
T 3bo9_A 141 ERAGADAVIA 150 (326)
T ss_dssp HHTTCSCEEE
T ss_pred HHcCCCEEEE
Confidence 9999999998
No 250
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=95.41 E-value=0.098 Score=47.09 Aligned_cols=81 Identities=21% Similarity=0.285 Sum_probs=55.0
Q ss_pred CcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc
Q 021575 140 IPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL 219 (310)
Q Consensus 140 i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~ 219 (310)
+..=+.+.+.+++..+.+.|+|.|-+-..... -+.+|+..+++.+++.
T Consensus 40 ~~lEvc~~s~~~a~~A~~gGAdRIELc~~l~~--------------------------------GGlTPS~g~i~~a~~~ 87 (287)
T 3iwp_A 40 FLMEVCVDSVESAVNAERGGADRIELCSGLSE--------------------------------GGTTPSMGVLQVVKQS 87 (287)
T ss_dssp SEEEEEESSHHHHHHHHHHTCSEEEECBCGGG--------------------------------TCBCCCHHHHHHHHTT
T ss_pred ceEEEEeCCHHHHHHHHHhCCCEEEECCCCCC--------------------------------CCCCCCHHHHHHHHHh
Confidence 44445678999999999999999876532110 0235567778888777
Q ss_pred CCCCEEEe--CCCC-CC-C-------HHHHHHHHHcCCCEEEEc
Q 021575 220 GRLPVVHF--AAGG-VA-T-------PADAAMMMQLGCDGVFVG 252 (310)
Q Consensus 220 ~~iPVi~i--A~GG-I~-t-------~~d~~~~l~~GadgV~VG 252 (310)
.++||.+. .-|| .- | .+|+..+.++|||||++|
T Consensus 88 ~~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~GAdGvVfG 131 (287)
T 3iwp_A 88 VQIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLYGADGLVFG 131 (287)
T ss_dssp CCSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred cCCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 78888763 2233 21 2 147778888899999888
No 251
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=95.33 E-value=0.067 Score=48.20 Aligned_cols=87 Identities=11% Similarity=0.166 Sum_probs=52.1
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHH-------HHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEE
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQ-------LIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYV 118 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~-------~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~V 118 (310)
+.|+.+.+.||+.| +++...+.. |+......+ .++.+++.+++|+.+..+ ..+.++.+.++|++.|
T Consensus 42 ~~a~~~v~~GAdiI-DIGgestrP----ga~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT~--~~~va~aAl~aGa~iI 114 (282)
T 1aj0_A 42 KHANLMINAGATII-DVGGESTRP----GAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTS--KPEVIRESAKVGAHII 114 (282)
T ss_dssp HHHHHHHHHTCSEE-EEESSCCST----TCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECC--CHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHCCCCEE-EECCCcCCC----CCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeCC--CHHHHHHHHHcCCCEE
Confidence 56888999999976 775222111 111111122 444445566999998665 3477899999999999
Q ss_pred E-eCCCCCchhHHHHHHhcCCCC
Q 021575 119 D-ESEVLTPADEENHINKHNFRI 140 (310)
Q Consensus 119 i-~~~~~~~~~~~~~i~~~~~~i 140 (310)
- .+.. ..++..+.+++++..+
T Consensus 115 Ndvsg~-~d~~~~~~~a~~~~~v 136 (282)
T 1aj0_A 115 NDIRSL-SEPGALEAAAETGLPV 136 (282)
T ss_dssp EETTTT-CSTTHHHHHHHHTCCE
T ss_pred EECCCC-CCHHHHHHHHHhCCeE
Confidence 4 3332 4445556665544433
No 252
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=95.19 E-value=0.89 Score=41.29 Aligned_cols=179 Identities=12% Similarity=0.039 Sum_probs=94.7
Q ss_pred cccCCCHHHHHHHHHcCCcEEEe--ccCCcccccccCCCCCCC---CHHHHHHHHhhc--CcceeeccccCc------HH
Q 021575 39 IMDVVTPEQARVAEEAGACAVMA--LERVPADIRSQGGVARMS---DPQLIKEIKQSV--TIPVMAKARIGH------FV 105 (310)
Q Consensus 39 i~~~~~~~~A~~~~~~Ga~~i~~--L~~~~~~~~~~~G~~~~~---~~~~i~~i~~~~--~iPv~vk~~~~~------~~ 105 (310)
+...-|.-.|+.++++|++++.. ..-......... ..... ....++.+++.+ ++||++..-.++ ..
T Consensus 29 ~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~s~~G~pD-~~~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg~~~~v~~ 107 (307)
T 3lye_A 29 CPGVYDGLSARTAMELGFKSLYMTGAGTTASRLGQPD-LAIAQLHDMRDNADMIANLDPFGPPLIADMDTGYGGPIMVAR 107 (307)
T ss_dssp EEEECSHHHHHHHHHTTCSCEEECHHHHHHHHHCCCS-SSCSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSSSHHHHHH
T ss_pred EecCcCHHHHHHHHHcCCCEEEeccHHHHHHhcCCCC-CCCCCHHHHHHHHHhhhccCCCCCcEEEECCCCCCCHHHHHH
Confidence 34566788999999999998721 100000000000 00111 123555666655 499999754442 34
Q ss_pred HHHHHHHcCCCEEEeCCC--------------CCchhHHHHHHh-------cCCCCcEEEecCCH-----HH----HHHH
Q 021575 106 EAQILEAIGIDYVDESEV--------------LTPADEENHINK-------HNFRIPFVCGCRNL-----GE----ALRR 155 (310)
Q Consensus 106 ~a~~~~~aGad~Vi~~~~--------------~~~~~~~~~i~~-------~~~~i~~~v~~~t~-----~e----a~~~ 155 (310)
.++.+.++||.+|.+-+. .+..+....++. .+.++.+++-+... ++ ++..
T Consensus 108 ~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay 187 (307)
T 3lye_A 108 TVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLGYEECIERLRAA 187 (307)
T ss_dssp HHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccCHHHHHHHHHHH
Confidence 567888999999942221 123333333322 13444454443332 22 2223
Q ss_pred HHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcC-CCCEEE-eCCCCCC
Q 021575 156 IREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG-RLPVVH-FAAGGVA 233 (310)
Q Consensus 156 ~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~-~iPVi~-iA~GGI~ 233 (310)
.++|+|.|.+.+.. +.+.++++.+.. .+|+++ +..+|-.
T Consensus 188 ~eAGAD~ifi~~~~---------------------------------------~~~~~~~i~~~~~~~Pv~~n~~~~g~~ 228 (307)
T 3lye_A 188 RDEGADVGLLEGFR---------------------------------------SKEQAAAAVAALAPWPLLLNSVENGHS 228 (307)
T ss_dssp HHTTCSEEEECCCS---------------------------------------CHHHHHHHHHHHTTSCBEEEEETTSSS
T ss_pred HHCCCCEEEecCCC---------------------------------------CHHHHHHHHHHccCCceeEEeecCCCC
Confidence 56788888776421 123344454433 367753 1244422
Q ss_pred CHHHHHHHHHcCCCEEEEcccccc
Q 021575 234 TPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 234 t~~d~~~~l~~GadgV~VGsai~~ 257 (310)
..-...++.++|+.-|+.+..+++
T Consensus 229 p~~t~~eL~~lGv~~v~~~~~~~r 252 (307)
T 3lye_A 229 PLITVEEAKAMGFRIMIFSFATLA 252 (307)
T ss_dssp CCCCHHHHHHHTCSEEEEETTTHH
T ss_pred CCCCHHHHHHcCCeEEEEChHHHH
Confidence 112456667889999999988886
No 253
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=95.18 E-value=0.13 Score=45.48 Aligned_cols=37 Identities=24% Similarity=0.504 Sum_probs=30.7
Q ss_pred CCCEEEeCCCCCCCHHHHHHHHHc-CCCEEEEccccccCCC
Q 021575 221 RLPVVHFAAGGVATPADAAMMMQL-GCDGVFVGSGVFKSGD 260 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~~d~~~~l~~-GadgV~VGsai~~a~d 260 (310)
+++|++ .|+| +++|+.+++.. +.||++||++-+++++
T Consensus 204 ~vrIlY--GGSV-~~~N~~~l~~~~diDG~LVGgAsL~a~~ 241 (250)
T 1yya_A 204 RVRILY--GGSV-NPKNFADLLSMPNVDGGLVGGASLELES 241 (250)
T ss_dssp TCEEEE--ESSC-CTTTHHHHHTSTTCCEEEESGGGSSHHH
T ss_pred ceeEEE--cCCC-CHHHHHHHHcCCCCCeeEeeHHHhChHH
Confidence 588883 6888 57999999965 9999999999997443
No 254
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=95.13 E-value=1.1 Score=39.99 Aligned_cols=95 Identities=13% Similarity=0.072 Sum_probs=52.6
Q ss_pred cccCCCHHHHHHHHHcCCcEEEeccCCcccccccC-CCCCCCC----HHHHHHHHhhc-CcceeeccccC-c------HH
Q 021575 39 IMDVVTPEQARVAEEAGACAVMALERVPADIRSQG-GVARMSD----PQLIKEIKQSV-TIPVMAKARIG-H------FV 105 (310)
Q Consensus 39 i~~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~-G~~~~~~----~~~i~~i~~~~-~iPv~vk~~~~-~------~~ 105 (310)
+...=|+..|+.++++|++.+ -.-..-... ..| -+..... ...++.+++.+ +.||++....+ + ..
T Consensus 33 m~tayDa~sA~l~e~aG~d~i-lvGdSl~~~-~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~s~~~a~~ 110 (275)
T 3vav_A 33 MLTCYDASFAALLDRANVDVQ-LIGDSLGNV-LQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYGTPADAFA 110 (275)
T ss_dssp EEECCSHHHHHHHHHTTCSEE-EECTTHHHH-TTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCSSHHHHHH
T ss_pred EEeCcCHHHHHHHHHcCCCEE-EECcHHHHH-HcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCCCHHHHHH
Confidence 444557789999999999987 211000000 001 0101111 23456677777 48888875543 2 23
Q ss_pred HHHHHHHcCCCEEEeCCCCCchhHHHHHHh
Q 021575 106 EAQILEAIGIDYVDESEVLTPADEENHINK 135 (310)
Q Consensus 106 ~a~~~~~aGad~Vi~~~~~~~~~~~~~i~~ 135 (310)
.+..+.++||++|-+-+...+.+.++.+.+
T Consensus 111 ~a~rl~kaGa~aVklEdg~~~~~~i~~l~~ 140 (275)
T 3vav_A 111 SAVKLMRAGAQMVKFEGGEWLAETVRFLVE 140 (275)
T ss_dssp HHHHHHHTTCSEEEEECCGGGHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCchhHHHHHHHHHH
Confidence 345677789999954444445555555554
No 255
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=95.11 E-value=0.58 Score=40.23 Aligned_cols=113 Identities=19% Similarity=0.197 Sum_probs=71.3
Q ss_pred CHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhc-CcceeeccccCcHHHHHHHHHcCCCEE--Ee
Q 021575 44 TPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSV-TIPVMAKARIGHFVEAQILEAIGIDYV--DE 120 (310)
Q Consensus 44 ~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~-~iPv~vk~~~~~~~~a~~~~~aGad~V--i~ 120 (310)
+.+.+..+.++||+.+ .+.... ..+. .| ....+.++.+++.+ +.++.+... ..+.++.+.++|+|.| ..
T Consensus 90 ~~~~i~~~~~~Gad~V-~l~~~~-~~~~-~~---~~~~~~i~~i~~~~~~~~v~~~~~--t~~ea~~a~~~Gad~i~~~v 161 (234)
T 1yxy_A 90 TMTEVDQLAALNIAVI-AMDCTK-RDRH-DG---LDIASFIRQVKEKYPNQLLMADIS--TFDEGLVAHQAGIDFVGTTL 161 (234)
T ss_dssp SHHHHHHHHTTTCSEE-EEECCS-SCCT-TC---CCHHHHHHHHHHHCTTCEEEEECS--SHHHHHHHHHTTCSEEECTT
T ss_pred hHHHHHHHHHcCCCEE-EEcccc-cCCC-CC---ccHHHHHHHHHHhCCCCeEEEeCC--CHHHHHHHHHcCCCEEeeec
Confidence 4578999999999987 442000 0000 00 01146788888776 677766543 3467888999999999 31
Q ss_pred C---CC---CCc--hhHHHHHHhcCCCCcEEE--ecCCHHHHHHHHHhCCCEEEEc
Q 021575 121 S---EV---LTP--ADEENHINKHNFRIPFVC--GCRNLGEALRRIREGAAMIRTK 166 (310)
Q Consensus 121 ~---~~---~~~--~~~~~~i~~~~~~i~~~v--~~~t~~ea~~~~~~Gad~V~v~ 166 (310)
. .. ... .+..+.+.+. ++++++ +++|.+++..+.++|+|.+.+.
T Consensus 162 ~g~~~~~~~~~~~~~~~i~~~~~~--~ipvia~GGI~s~~~~~~~~~~Gad~v~vG 215 (234)
T 1yxy_A 162 SGYTPYSRQEAGPDVALIEALCKA--GIAVIAEGKIHSPEEAKKINDLGVAGIVVG 215 (234)
T ss_dssp TTSSTTSCCSSSCCHHHHHHHHHT--TCCEEEESCCCSHHHHHHHHTTCCSEEEEC
T ss_pred cccCCCCcCCCCCCHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHHCCCCEEEEc
Confidence 1 11 111 2333344333 666666 4888999999999999999874
No 256
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=95.10 E-value=0.063 Score=46.89 Aligned_cols=85 Identities=15% Similarity=0.103 Sum_probs=60.1
Q ss_pred ccccCCCHHHHHHHHHcCCcEEEecc--CCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCC
Q 021575 38 VIMDVVTPEQARVAEEAGACAVMALE--RVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGI 115 (310)
Q Consensus 38 ~i~~~~~~~~A~~~~~~Ga~~i~~L~--~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGa 115 (310)
.+.++.+.+.++.+++.|++.| ..+ ......+ ....+++.++++++. ++|+++...+...+++..+.++||
T Consensus 132 v~~~v~t~eea~~a~~~Gad~I-g~~~~g~t~~~~-----~~~~~~~~i~~l~~~-~ipvIA~GGI~t~~d~~~~~~~Ga 204 (232)
T 3igs_A 132 TMADCSSVDDGLACQRLGADII-GTTMSGYTTPDT-----PEEPDLPLVKALHDA-GCRVIAEGRYNSPALAAEAIRYGA 204 (232)
T ss_dssp EEEECCSHHHHHHHHHTTCSEE-ECTTTTSSSSSC-----CSSCCHHHHHHHHHT-TCCEEEESCCCSHHHHHHHHHTTC
T ss_pred EEEeCCCHHHHHHHHhCCCCEE-EEcCccCCCCCC-----CCCCCHHHHHHHHhc-CCcEEEECCCCCHHHHHHHHHcCC
Confidence 4567788899999999999987 322 1111001 123457899999887 999999888876788999999999
Q ss_pred CEEE-eCCCCCchhH
Q 021575 116 DYVD-ESEVLTPADE 129 (310)
Q Consensus 116 d~Vi-~~~~~~~~~~ 129 (310)
|+|. ++....+.+.
T Consensus 205 dgV~VGsal~~p~~~ 219 (232)
T 3igs_A 205 WAVTVGSAITRLEHI 219 (232)
T ss_dssp SEEEECHHHHCHHHH
T ss_pred CEEEEehHhcCHHHH
Confidence 9996 4333344433
No 257
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=95.02 E-value=0.066 Score=46.68 Aligned_cols=85 Identities=14% Similarity=0.089 Sum_probs=60.1
Q ss_pred ccccCCCHHHHHHHHHcCCcEEEecc--CCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCC
Q 021575 38 VIMDVVTPEQARVAEEAGACAVMALE--RVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGI 115 (310)
Q Consensus 38 ~i~~~~~~~~A~~~~~~Ga~~i~~L~--~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGa 115 (310)
.+.++.+.+.++.+++.|++.| ..+ ...... .....+++.++++++. ++|+++...+...+++..+.++||
T Consensus 132 v~~~v~t~eea~~a~~~Gad~I-g~~~~g~t~~~-----~~~~~~~~li~~l~~~-~ipvIA~GGI~t~~d~~~~~~~Ga 204 (229)
T 3q58_A 132 AMADCSTVNEGISCHQKGIEFI-GTTLSGYTGPI-----TPVEPDLAMVTQLSHA-GCRVIAEGRYNTPALAANAIEHGA 204 (229)
T ss_dssp EEEECSSHHHHHHHHHTTCSEE-ECTTTTSSSSC-----CCSSCCHHHHHHHHTT-TCCEEEESSCCSHHHHHHHHHTTC
T ss_pred EEEecCCHHHHHHHHhCCCCEE-EecCccCCCCC-----cCCCCCHHHHHHHHHc-CCCEEEECCCCCHHHHHHHHHcCC
Confidence 4667788999999999999987 322 110000 0123457889999887 999999888877788999999999
Q ss_pred CEEE-eCCCCCchhH
Q 021575 116 DYVD-ESEVLTPADE 129 (310)
Q Consensus 116 d~Vi-~~~~~~~~~~ 129 (310)
|+|. ++....+...
T Consensus 205 dgV~VGsai~~p~~~ 219 (229)
T 3q58_A 205 WAVTVGSAITRIEHI 219 (229)
T ss_dssp SEEEECHHHHCHHHH
T ss_pred CEEEEchHhcChHHH
Confidence 9996 4333334433
No 258
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=94.95 E-value=1 Score=40.32 Aligned_cols=174 Identities=18% Similarity=0.189 Sum_probs=99.4
Q ss_pred HHHHHHHHcCCcEE-Eecc-CCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEE-EeCC
Q 021575 46 EQARVAEEAGACAV-MALE-RVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYV-DESE 122 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i-~~L~-~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~V-i~~~ 122 (310)
++|+++.++|++.+ .+.. |-... ..+.|.. ..-++.++++++..++|+..-.. +...++.+.+. +|.+ +.+.
T Consensus 56 ~~a~~~k~~ga~~~k~~~~kprts~-~~f~g~g-~~gl~~l~~~~~~~Gl~~~te~~--d~~~~~~l~~~-vd~~kIgs~ 130 (276)
T 1vs1_A 56 EAALAVKEAGAHMLRGGAFKPRTSP-YSFQGLG-LEGLKLLRRAGDEAGLPVVTEVL--DPRHVETVSRY-ADMLQIGAR 130 (276)
T ss_dssp HHHHHHHHHTCSEEECBSSCCCSST-TSCCCCT-HHHHHHHHHHHHHHTCCEEEECC--CGGGHHHHHHH-CSEEEECGG
T ss_pred HHHHHHHHhCCCEEEeEEEeCCCCh-hhhcCCC-HHHHHHHHHHHHHcCCcEEEecC--CHHHHHHHHHh-CCeEEECcc
Confidence 46777788999986 3332 11110 1111110 11245666667778999986543 23456667777 8998 5666
Q ss_pred CCCchhHHHHHHhcCCCCcEEEe--cC-CHHHHHHHHH----hCC-CEEEEc-CC-CCCcchHHHHHHHHhhccceEeec
Q 021575 123 VLTPADEENHINKHNFRIPFVCG--CR-NLGEALRRIR----EGA-AMIRTK-GE-AGTGNIIEAVRHVRSVMGDIRVLR 192 (310)
Q Consensus 123 ~~~~~~~~~~i~~~~~~i~~~v~--~~-t~~ea~~~~~----~Ga-d~V~v~-g~-~~~~~~~~~~~~~r~~~~~~~~l~ 192 (310)
.+...++.+.+.. .+.+++++ .. |.+|...+.+ .|. +++-++ |. .+ +
T Consensus 131 ~~~n~~ll~~~a~--~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~y---------------------p 187 (276)
T 1vs1_A 131 NMQNFPLLREVGR--SGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTF---------------------E 187 (276)
T ss_dssp GTTCHHHHHHHHH--HTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCS---------------------C
T ss_pred cccCHHHHHHHHc--cCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCC---------------------C
Confidence 6777777777654 35666665 43 6788776654 465 566555 42 12 1
Q ss_pred ccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCC--CCCCC--HHHHHHHHHcCCCEEEEccccc
Q 021575 193 NMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAA--GGVAT--PADAAMMMQLGCDGVFVGSGVF 256 (310)
Q Consensus 193 ~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~--GGI~t--~~d~~~~l~~GadgV~VGsai~ 256 (310)
+.. ....++..+..+++..++||+..++ +|.+. ..-...+..+||+|+++=+-+.
T Consensus 188 ~y~---------~~~vdl~~i~~lk~~~~lpVi~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~~ 246 (276)
T 1vs1_A 188 PST---------RFTLDVAAVAVLKEATHLPVIVDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHPN 246 (276)
T ss_dssp CSS---------SSBCBHHHHHHHHHHBSSCEEECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCSS
T ss_pred CcC---------cchhCHHHHHHHHHHhCCCEEEeCCCCCCccchHHHHHHHHHHcCCCEEEEEecCC
Confidence 100 1123455566677756789863211 14322 2334445678999999887663
No 259
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=94.90 E-value=0.42 Score=44.03 Aligned_cols=208 Identities=13% Similarity=0.091 Sum_probs=114.9
Q ss_pred HHHHHHHHcCCcEEEecc---CCcc-cccccCCCCCCCCHHHHHHHHhh-cCcceeecc-c-cCcHHHHHHHHHcCCCEE
Q 021575 46 EQARVAEEAGACAVMALE---RVPA-DIRSQGGVARMSDPQLIKEIKQS-VTIPVMAKA-R-IGHFVEAQILEAIGIDYV 118 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~---~~~~-~~~~~~G~~~~~~~~~i~~i~~~-~~iPv~vk~-~-~~~~~~a~~~~~aGad~V 118 (310)
+.++.+.++|++.| ++- ..|. ...+ |.......+.++++++. .++|+.+-. . .+..++++.+.++|+|.+
T Consensus 34 ~i~~~L~~~Gvd~I-EvG~~~g~p~ssp~~--g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~~aGvd~v 110 (345)
T 1nvm_A 34 AIARALDKAKVDSI-EVAHGDGLQGSSFNY--GFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQAGARVV 110 (345)
T ss_dssp HHHHHHHHHTCSEE-ECSCTTSTTCCBTTT--BCCSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHcCCCEE-EEecCCCCCCCCCcc--cCCCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHHhCCcCEE
Confidence 57889999999976 551 0000 0011 22223446778788765 367776652 1 234678899999999999
Q ss_pred EeCCCC----CchhHHHHHHhcCCCCcEEEe---cCCHHH----HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccc
Q 021575 119 DESEVL----TPADEENHINKHNFRIPFVCG---CRNLGE----ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGD 187 (310)
Q Consensus 119 i~~~~~----~~~~~~~~i~~~~~~i~~~v~---~~t~~e----a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~ 187 (310)
.+.... ...+..+.+++++..+...++ -.+.+. ++.+.+.|++.|.+....+...
T Consensus 111 ~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~-------------- 176 (345)
T 1nvm_A 111 RVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMADSGGAMS-------------- 176 (345)
T ss_dssp EEEEETTCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEECTTCCCC--------------
T ss_pred EEEEeccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCccC--------------
Confidence 533222 344556666656555444432 123433 3334567999888765433211
Q ss_pred eEeecccChhHHHHhhhccCCcHHHHHHHhhcC--CCCEEEe--CCCCCCCHHHHHHHHHcCCCEEEEcc-ccc-cCCCH
Q 021575 188 IRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG--RLPVVHF--AAGGVATPADAAMMMQLGCDGVFVGS-GVF-KSGDP 261 (310)
Q Consensus 188 ~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~--~iPVi~i--A~GGI~t~~d~~~~l~~GadgV~VGs-ai~-~a~dp 261 (310)
|+. ..++++.+++.. ++|+-+= -.-|. ...+...++++||+.|=..= .+= ++.|+
T Consensus 177 --------P~~----------v~~lv~~l~~~~~~~~pi~~H~Hn~~G~-avAn~laA~~aGa~~vd~tv~GlG~~aGN~ 237 (345)
T 1nvm_A 177 --------MND----------IRDRMRAFKAVLKPETQVGMHAHHNLSL-GVANSIVAVEEGCDRVDASLAGMGAGAGNA 237 (345)
T ss_dssp --------HHH----------HHHHHHHHHHHSCTTSEEEEECBCTTSC-HHHHHHHHHHTTCCEEEEBGGGCSSTTCBC
T ss_pred --------HHH----------HHHHHHHHHHhcCCCceEEEEECCCccH-HHHHHHHHHHcCCCEEEecchhccCCccCc
Confidence 111 134566666655 6777520 13366 36778888999988765331 111 13454
Q ss_pred HHHHHHHHHHHhc-----cCChhhhhhhhhhcccc
Q 021575 262 VKRAQAIVRAVTH-----YSDPEVLAEVSCGLGEA 291 (310)
Q Consensus 262 ~~~a~~l~~~i~~-----~~~~~~~~~~~~~~~~~ 291 (310)
. .+.++..++. ..+-..+.++++.+...
T Consensus 238 ~--le~lv~~L~~~g~~~~idl~~l~~~~~~~~~~ 270 (345)
T 1nvm_A 238 P--LEVFIAVAERLGWNHGTDLYTLMDAADDIVRP 270 (345)
T ss_dssp B--HHHHHHHHHHHTCBCCSCHHHHHHHHHHTTGG
T ss_pred C--HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 3 2334433332 34556677777766655
No 260
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=94.82 E-value=0.15 Score=45.56 Aligned_cols=84 Identities=12% Similarity=0.120 Sum_probs=49.7
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHH------hhcCcceeeccccCcHHHHHHHHHcCCCEE-
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIK------QSVTIPVMAKARIGHFVEAQILEAIGIDYV- 118 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~------~~~~iPv~vk~~~~~~~~a~~~~~aGad~V- 118 (310)
+.|+.+.+.||+.| ++....+.. |+......++++++. +..++|+.+..+ ..+.++.+.++||+.|
T Consensus 34 ~~a~~m~~~GAdiI-DIGgeSTRP----ga~~vs~eeE~~Rv~pvi~~l~~~~v~iSIDT~--~~~Va~~al~aGa~iIN 106 (270)
T 4hb7_A 34 NRVKAMIDEGADII-DVGGVSTRP----GHEMVTLEEELNRVLPVVEAIVGFDVKISVDTF--RSEVAEACLKLGVDMIN 106 (270)
T ss_dssp HHHHHHHHTTCSEE-EEESCCCST----TCCCCCHHHHHHHHHHHHHHHTTSSSEEEEECS--CHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHCCCCEE-EECCccCCC----CCCCCchHHHHHHHHHHHHHhhcCCCeEEEECC--CHHHHHHHHHhccceec
Confidence 56889999999965 774222211 121222234444431 135788888766 3477899999999998
Q ss_pred EeCCCCCchhHHHHHHhc
Q 021575 119 DESEVLTPADEENHINKH 136 (310)
Q Consensus 119 i~~~~~~~~~~~~~i~~~ 136 (310)
.++.....++..+.+.++
T Consensus 107 DVs~g~~d~~m~~~va~~ 124 (270)
T 4hb7_A 107 DQWAGLYDHRMFQIVAKY 124 (270)
T ss_dssp ETTTTSSCTHHHHHHHHT
T ss_pred cccccccchhHHHHHHHc
Confidence 344444344555555443
No 261
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=94.78 E-value=0.086 Score=49.26 Aligned_cols=137 Identities=13% Similarity=0.156 Sum_probs=75.1
Q ss_pred hcCcceeecccc-C-------cHHHHHHHHHcCCCEEEeCC--CCCchhHHHH-HHhcCCCCcEEEecC---CHHHHHHH
Q 021575 90 SVTIPVMAKARI-G-------HFVEAQILEAIGIDYVDESE--VLTPADEENH-INKHNFRIPFVCGCR---NLGEALRR 155 (310)
Q Consensus 90 ~~~iPv~vk~~~-~-------~~~~a~~~~~aGad~Vi~~~--~~~~~~~~~~-i~~~~~~i~~~v~~~---t~~ea~~~ 155 (310)
....|+.+.--. + ....++.+.++|+-..+++. .++.++.... +.+..++.+.++.+. +.+++.++
T Consensus 84 ~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~~le~~~~~~~~v~r~~P~~~~ianig~~~~~e~~~~~ 163 (365)
T 3sr7_A 84 DFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYSTALKNPDDTSYQVKKSRPHLLLATNIGLDKPYQAGLQA 163 (365)
T ss_dssp EESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC-----------------------CCEEEEEETTSCHHHHHHH
T ss_pred EccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeecccccccccCccccceEehhhCCCCcEEEEeCCCCCHHHHHHH
Confidence 457888874211 1 13467889999999887333 2222222111 222225555555543 66777777
Q ss_pred H-HhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCC--
Q 021575 156 I-REGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGV-- 232 (310)
Q Consensus 156 ~-~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI-- 232 (310)
. ..|+|.+.+|....+. .. -+.-+ .+.....+.++++++..++||++ .++
T Consensus 164 ve~~~adal~ihln~~qe-------~~---------~p~Gd--------~~~~~~~~~I~~l~~~~~~PViv---K~vg~ 216 (365)
T 3sr7_A 164 VRDLQPLFLQVHINLMQE-------LL---------MPEGE--------REFRSWKKHLSDYAKKLQLPFIL---KEVGF 216 (365)
T ss_dssp HHHHCCSCEEEEECHHHH-------HT---------SSSSC--------CCCHHHHHHHHHHHHHCCSCEEE---EECSS
T ss_pred HHhcCCCEEEEecccccc-------cc---------CCCCC--------CcHHHHHHHHHHHHHhhCCCEEE---EECCC
Confidence 6 6799998887431100 00 00000 00001136788888888999985 345
Q ss_pred -CCHHHHHHHHHcCCCEEEEcc
Q 021575 233 -ATPADAAMMMQLGCDGVFVGS 253 (310)
Q Consensus 233 -~t~~d~~~~l~~GadgV~VGs 253 (310)
.+++++..+.++|+|+|.|+.
T Consensus 217 g~s~e~A~~l~~aGad~I~V~g 238 (365)
T 3sr7_A 217 GMDVKTIQTAIDLGVKTVDISG 238 (365)
T ss_dssp CCCHHHHHHHHHHTCCEEECCC
T ss_pred CCCHHHHHHHHHcCCCEEEEeC
Confidence 589999999999999999954
No 262
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=94.71 E-value=0.14 Score=45.36 Aligned_cols=38 Identities=24% Similarity=0.412 Sum_probs=30.9
Q ss_pred CCCEEEeCCCCCCCHHHHHHHHHc-CCCEEEEccccccCCCH
Q 021575 221 RLPVVHFAAGGVATPADAAMMMQL-GCDGVFVGSGVFKSGDP 261 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~~d~~~~l~~-GadgV~VGsai~~a~dp 261 (310)
+++|+ -.|+| +++|+.+++.. +.||++||++-++++++
T Consensus 206 ~vrIl--YGGSV-~~~N~~~l~~~~diDG~LVGgAsL~a~~F 244 (256)
T 1aw2_A 206 NVVIQ--YGGSV-KPENAAAYFAQPDIDGALVGGAALDAKSF 244 (256)
T ss_dssp HCEEE--ECSCC-CTTTHHHHTTSTTCCEEEESGGGGCHHHH
T ss_pred cccEE--EcCCC-CHHHHHHHHcCCCCCeeeecHHHhChHHH
Confidence 47888 46888 57999999965 99999999999974443
No 263
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=94.56 E-value=0.16 Score=46.44 Aligned_cols=86 Identities=14% Similarity=0.100 Sum_probs=50.0
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHH-------HHHHHHhhc-CcceeeccccCcHHHHHHHHHcCCCE
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQ-------LIKEIKQSV-TIPVMAKARIGHFVEAQILEAIGIDY 117 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~-------~i~~i~~~~-~iPv~vk~~~~~~~~a~~~~~aGad~ 117 (310)
+.|+.+.+.||+.| |++...+.. | ......+ .++.+++.+ ++|+++..+ ..+.++.+.++|++.
T Consensus 69 ~~A~~~v~~GAdII-DIGgeSTrP----G-~~v~~~eEl~Rv~pvI~~l~~~~~~vpISIDT~--~~~VaeaAl~aGa~i 140 (318)
T 2vp8_A 69 DAVHRAVADGADVI-DVGGVKAGP----G-ERVDVDTEITRLVPFIEWLRGAYPDQLISVDTW--RAQVAKAACAAGADL 140 (318)
T ss_dssp HHHHHHHHTTCSEE-EEC---------------CHHHHHHHHHHHHHHHHHHSTTCEEEEECS--CHHHHHHHHHHTCCE
T ss_pred HHHHHHHHCCCCEE-EECCCcCCC----C-CCCCHHHHHHHHHHHHHHHHhhCCCCeEEEeCC--CHHHHHHHHHhCCCE
Confidence 46888999999965 886221111 1 0111123 345556666 899988665 347788999999998
Q ss_pred EE-eCCCCCchhHHHHHHhcCCCC
Q 021575 118 VD-ESEVLTPADEENHINKHNFRI 140 (310)
Q Consensus 118 Vi-~~~~~~~~~~~~~i~~~~~~i 140 (310)
|- .+. ....++.+.+++++..+
T Consensus 141 INDVsg-~~d~~m~~vaa~~g~~v 163 (318)
T 2vp8_A 141 INDTWG-GVDPAMPEVAAEFGAGL 163 (318)
T ss_dssp EEETTS-SSSTTHHHHHHHHTCEE
T ss_pred EEECCC-CCchHHHHHHHHhCCCE
Confidence 84 332 23445666665554333
No 264
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=94.56 E-value=0.057 Score=47.51 Aligned_cols=80 Identities=16% Similarity=0.152 Sum_probs=57.3
Q ss_pred hhhCcccccCCCHHHHHHHHHcCC-c--EEEeccCCcccccccCCCCCCCCHHHHHHHHhhc-CcceeeccccCcHHHHH
Q 021575 33 MLRGGVIMDVVTPEQARVAEEAGA-C--AVMALERVPADIRSQGGVARMSDPQLIKEIKQSV-TIPVMAKARIGHFVEAQ 108 (310)
Q Consensus 33 ~~~~g~i~~~~~~~~A~~~~~~Ga-~--~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~-~iPv~vk~~~~~~~~a~ 108 (310)
++-.+.+. ++++.++++.+.|. . .++.|+. .|. ..+.+.++++++.+ ++|+.+...+...++++
T Consensus 131 rl~~~d~~--~~~~~~~~~a~~g~~~~~~~VYl~s--------~G~--~~~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~ 198 (240)
T 1viz_A 131 ALTEADAD--LNMDDIVAYARVSELLQLPIFYLEY--------SGV--LGDIEAVKKTKAVLETSTLFYGGGIKDAETAK 198 (240)
T ss_dssp HHTTBCCC--CCHHHHHHHHHHHHHTTCSEEEEEC--------TTS--CCCHHHHHHHHHTCSSSEEEEESSCCSHHHHH
T ss_pred EeeccCCC--CCHHHHHHHHHhCcccCCCEEEEeC--------CCc--cChHHHHHHHHHhcCCCCEEEEeccCCHHHHH
Confidence 44444433 56788888888773 2 3456631 122 34689999999999 99999999888888999
Q ss_pred HHHHcCCCEEE-eCCCCC
Q 021575 109 ILEAIGIDYVD-ESEVLT 125 (310)
Q Consensus 109 ~~~~aGad~Vi-~~~~~~ 125 (310)
.+.+ |||+|+ ++....
T Consensus 199 ~~~~-gAd~VIVGSa~v~ 215 (240)
T 1viz_A 199 QYAE-HADVIVVGNAVYE 215 (240)
T ss_dssp HHHT-TCSEEEECTHHHH
T ss_pred HHHh-CCCEEEEChHHHh
Confidence 9888 999996 554433
No 265
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=94.56 E-value=0.53 Score=41.68 Aligned_cols=179 Identities=13% Similarity=0.145 Sum_probs=101.2
Q ss_pred cccccC-CCHHHHHHHHHcCCcEE-EeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcC
Q 021575 37 GVIMDV-VTPEQARVAEEAGACAV-MALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIG 114 (310)
Q Consensus 37 g~i~~~-~~~~~A~~~~~~Ga~~i-~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aG 114 (310)
|.+... .+++.++.+...|+|++ +||+..+..... ....+..+. ..+.++++........+++.+.+.|
T Consensus 18 g~~~~~~~~p~~~e~a~~~g~D~vilDlEhav~~~~k--------~~~~l~a~~-~~~~~~~VRVn~~~~~di~~~ld~G 88 (261)
T 3qz6_A 18 GTMLNLVYNPDIVRIYAEAGLDYFIVDCEHAAYTFRE--------INHLVSVAK-NAGVSVLVRIPQVDRAHVQRLLDIG 88 (261)
T ss_dssp EEEESSCCCTTHHHHHHHTTCSEEEEESSSSCCCHHH--------HHHHHHHHH-HHTCEEEEECSSCCHHHHHHHHHHT
T ss_pred EEEEecCCCHHHHHHHhcCCcCEEEEeccCCCCCHHH--------HHHHHHHHh-hcCCeEEEEeCCCCHHHHHHHHhcC
Confidence 566677 88999999999999998 678622211110 012233222 3466677655433345788888999
Q ss_pred CCEEEeCCCCCchhHHHHHHh-cC-----------------------------CCCcEEEecCCHHHHHHHHH----hCC
Q 021575 115 IDYVDESEVLTPADEENHINK-HN-----------------------------FRIPFVCGCRNLGEALRRIR----EGA 160 (310)
Q Consensus 115 ad~Vi~~~~~~~~~~~~~i~~-~~-----------------------------~~i~~~v~~~t~~ea~~~~~----~Ga 160 (310)
+++|+.+...+..++....+. .+ ..+.+++-+.|.+-+..+.+ .|+
T Consensus 89 ~~gI~lP~v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~av~~~~eIaa~~~v 168 (261)
T 3qz6_A 89 AEGFMIPGVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAVEDIDSILAVQGV 168 (261)
T ss_dssp CCEEEETTCCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHHHHTHHHHHTSTTC
T ss_pred CCEEEECCcCCHHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEEEEECCHHHHHHHHHHhCCCCC
Confidence 999988877666666544433 11 12556666777755444332 367
Q ss_pred CEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCc--HHHHHHH---hhcCCCCEEEeCCCCCCCH
Q 021575 161 AMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAP--YDLVMQT---KQLGRLPVVHFAAGGVATP 235 (310)
Q Consensus 161 d~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~--~~~i~~i---~~~~~iPVi~iA~GGI~t~ 235 (310)
|.+.+.. .++. .++ .. +. +...+ ...++++ ++...+|+-+. ++ ++
T Consensus 169 d~l~iG~----~DL~------~~l----g~-~~-----------~~~~p~v~~a~~~iv~aa~aaG~~~g~~--~~--~~ 218 (261)
T 3qz6_A 169 DAVIFGP----RDLS------NDL----GI-IG-----------QTEHPKVYECYEKVYRAADRQGVVKGFF--TA--AD 218 (261)
T ss_dssp CEEEECH----HHHH------HHT----TC-TT-----------CTTCHHHHHHHHHHHHHHHHHTCEEEEE--ES--SC
T ss_pred CEEEECH----HHHH------HHh----CC-CC-----------CCCCHHHHHHHHHHHHHHHHhCCCEEEE--eC--CH
Confidence 8777632 1211 110 00 00 00001 1222222 12235676532 33 68
Q ss_pred HHH-HHHHHcCCCEEEEccc
Q 021575 236 ADA-AMMMQLGCDGVFVGSG 254 (310)
Q Consensus 236 ~d~-~~~l~~GadgV~VGsa 254 (310)
+.+ ..++..|++.+.+|+-
T Consensus 219 ~~~~~~~~~~G~~~~s~~~D 238 (261)
T 3qz6_A 219 AAKMGWAVERGAQMLLWSGD 238 (261)
T ss_dssp GGGGHHHHHTTCCEEEEEEH
T ss_pred HHHHHHHHHCCCCEEEEhhH
Confidence 888 8888999999999963
No 266
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=94.55 E-value=0.27 Score=48.38 Aligned_cols=87 Identities=24% Similarity=0.212 Sum_probs=61.4
Q ss_pred CHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHH-cCCCEEEeCC
Q 021575 44 TPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEA-IGIDYVDESE 122 (310)
Q Consensus 44 ~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~-aGad~Vi~~~ 122 (310)
..+.++.+++.|++.|+.-+ +.. .|.....+.+.++++++.+++||++...+...++++.+.+ .|+++++...
T Consensus 454 ~~e~a~~~~~~Ga~~il~t~-----~~~-dG~~~G~d~~li~~l~~~~~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~ 527 (555)
T 1jvn_A 454 VWELTRACEALGAGEILLNC-----IDK-DGSNSGYDLELIEHVKDAVKIPVIASSGAGVPEHFEEAFLKTRADACLGAG 527 (555)
T ss_dssp HHHHHHHHHHTTCCEEEECC-----GGG-TTTCSCCCHHHHHHHHHHCSSCEEECSCCCSHHHHHHHHHHSCCSEEEESH
T ss_pred HHHHHHHHHHcCCCEEEEeC-----CCC-CCCCCCCCHHHHHHHHHhCCccEEEECCCCCHHHHHHHHHhcCChHHHHHH
Confidence 35899999999999984321 111 1222234689999999999999999888877788888877 8999996332
Q ss_pred -----CCCchhHHHHHHhc
Q 021575 123 -----VLTPADEENHINKH 136 (310)
Q Consensus 123 -----~~~~~~~~~~i~~~ 136 (310)
.....++.+.++..
T Consensus 528 a~~~~~~~~~e~~~~l~~~ 546 (555)
T 1jvn_A 528 MFHRGEFTVNDVKEYLLEH 546 (555)
T ss_dssp HHHTTSCCHHHHHHHHHHT
T ss_pred HHHcCCCCHHHHHHHHHHC
Confidence 23455555555443
No 267
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=94.53 E-value=1.4 Score=38.95 Aligned_cols=182 Identities=13% Similarity=0.124 Sum_probs=99.7
Q ss_pred ccCCCH----HHHHHHHHcCCcEE-Eec-cCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHc
Q 021575 40 MDVVTP----EQARVAEEAGACAV-MAL-ERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAI 113 (310)
Q Consensus 40 ~~~~~~----~~A~~~~~~Ga~~i-~~L-~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~a 113 (310)
..+.+. ++|+++.++|++.+ .+. .|...... +.|.. ...++.++++++..++|+..-.. +...++.+.+.
T Consensus 31 c~~~~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~-~~g~~-~egl~~l~~~~~~~Gl~~~te~~--d~~~~~~l~~~ 106 (262)
T 1zco_A 31 CSIESREQIMKVAEFLAEVGIKVLRGGAFKPRTSPYS-FQGYG-EKALRWMREAADEYGLVTVTEVM--DTRHVELVAKY 106 (262)
T ss_dssp SBCCCHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTS-CCCCT-HHHHHHHHHHHHHHTCEEEEECC--CGGGHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEEecccCCCccc-ccCcc-HHHHHHHHHHHHHcCCcEEEeeC--CHHhHHHHHhh
Confidence 345555 46778889999977 222 12111101 11110 11234566667778999987544 22446677777
Q ss_pred CCCEE-EeCCCCCchhHHHHHHhcCCCCcEEEe--cC-CHHHHHHHHH----hCC-CEEEEcCCCCCcchHHHHHHHHhh
Q 021575 114 GIDYV-DESEVLTPADEENHINKHNFRIPFVCG--CR-NLGEALRRIR----EGA-AMIRTKGEAGTGNIIEAVRHVRSV 184 (310)
Q Consensus 114 Gad~V-i~~~~~~~~~~~~~i~~~~~~i~~~v~--~~-t~~ea~~~~~----~Ga-d~V~v~g~~~~~~~~~~~~~~r~~ 184 (310)
+|.+ +.+..+...++.+.+.+ .+.+++++ .. |.+++..+++ .|. +++.++ ++++..
T Consensus 107 -vd~~kIga~~~~n~~ll~~~a~--~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~-RG~~~~----------- 171 (262)
T 1zco_A 107 -SDILQIGARNSQNFELLKEVGK--VENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCE-RGIRTF----------- 171 (262)
T ss_dssp -CSEEEECGGGTTCHHHHHHHTT--SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEE-CCBCCS-----------
T ss_pred -CCEEEECcccccCHHHHHHHHh--cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEE-CCCCCC-----------
Confidence 8998 56666666666666543 56777775 33 7888877764 365 444444 211000
Q ss_pred ccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCC--CCCCC--HHHHHHHHHcCCCEEEEccccc
Q 021575 185 MGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAA--GGVAT--PADAAMMMQLGCDGVFVGSGVF 256 (310)
Q Consensus 185 ~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~--GGI~t--~~d~~~~l~~GadgV~VGsai~ 256 (310)
-.+ . ....++..+..+++..++||+..++ +|.+. +.-...+..+|++|+++=+-+.
T Consensus 172 ------~~y-~---------~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~~ 231 (262)
T 1zco_A 172 ------ETA-T---------RFTLDISAVPVVKELSHLPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMVEVHPE 231 (262)
T ss_dssp ------CCS-S---------SSBCCTTHHHHHHHHBSSCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBCSS
T ss_pred ------CCc-C---------hhhcCHHHHHHHHhhhCCCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEEEecCC
Confidence 000 0 0122334555666656789864322 22211 0224446689999999887654
No 268
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=94.51 E-value=0.59 Score=42.59 Aligned_cols=94 Identities=11% Similarity=0.051 Sum_probs=52.9
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCC-------CCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEE
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARM-------SDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYV 118 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~-------~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~V 118 (310)
+.|+.+.+.||+.| |++...+......+.... +....++.+++.+++|+.+..+ ..+.++.+.++|++.|
T Consensus 53 ~~A~~~v~~GAdII-DIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT~--~~~Va~aAl~aGa~iI 129 (314)
T 3tr9_A 53 RTAEKMVDEGADIL-DIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDTS--RPRVMREAVNTGADMI 129 (314)
T ss_dssp HHHHHHHHTTCSEE-EEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEECS--CHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHCCCCEE-EECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeCC--CHHHHHHHHHcCCCEE
Confidence 56888999999965 775222111100000000 0122445556667899998775 3477889999999998
Q ss_pred EeCCCCCchhHHHHHHhcCCCCcE
Q 021575 119 DESEVLTPADEENHINKHNFRIPF 142 (310)
Q Consensus 119 i~~~~~~~~~~~~~i~~~~~~i~~ 142 (310)
--.......+..+.+.+++..+.+
T Consensus 130 NDVsg~~~~~m~~v~a~~g~~vVl 153 (314)
T 3tr9_A 130 NDQRALQLDDALTTVSALKTPVCL 153 (314)
T ss_dssp EETTTTCSTTHHHHHHHHTCCEEE
T ss_pred EECCCCCchHHHHHHHHhCCeEEE
Confidence 422222234566666555443333
No 269
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=94.48 E-value=0.17 Score=44.83 Aligned_cols=77 Identities=18% Similarity=0.305 Sum_probs=51.8
Q ss_pred EecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCC
Q 021575 144 CGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLP 223 (310)
Q Consensus 144 v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iP 223 (310)
+.+.+.+++..+.+.|+|-|-+-..-.. -+.+|++.+++.+++..++|
T Consensus 6 vc~~s~~~a~~A~~~GAdRIELc~~L~~--------------------------------GGlTPS~g~i~~~~~~~~ip 53 (256)
T 1twd_A 6 ICCYSMECALTAQQNGADRVELCAAPKE--------------------------------GGLTPSLGVLKSVRQRVTIP 53 (256)
T ss_dssp EEESSHHHHHHHHHTTCSEEEECBCGGG--------------------------------TCBCCCHHHHHHHHHHCCSC
T ss_pred EEeCCHHHHHHHHHcCCCEEEEcCCccc--------------------------------CCCCCCHHHHHHHHHHcCCc
Confidence 4567899999999999998876532110 02355677777777777888
Q ss_pred EEEe--C-CCCC-CCH-------HHHHHHHHcCCCEEEEc
Q 021575 224 VVHF--A-AGGV-ATP-------ADAAMMMQLGCDGVFVG 252 (310)
Q Consensus 224 Vi~i--A-~GGI-~t~-------~d~~~~l~~GadgV~VG 252 (310)
|.++ . .|+. .|. +|+..+.++|+|||++|
T Consensus 54 v~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G 93 (256)
T 1twd_A 54 VHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTG 93 (256)
T ss_dssp EEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred eEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 8764 2 2333 232 35666777888888888
No 270
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=94.46 E-value=0.25 Score=44.67 Aligned_cols=84 Identities=17% Similarity=0.175 Sum_probs=48.7
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCC-------CHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEE
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMS-------DPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYV 118 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~-------~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~V 118 (310)
+.|+.+.+.||+.| +++...+.. |..... ....++.+++. ++|+++..+ ..+.++.+.++|++.|
T Consensus 56 ~~a~~~v~~GAdII-DIGgeSTrP----ga~~v~~~eE~~Rv~pvI~~l~~~-~vpiSIDT~--~~~Va~aAl~aGa~iI 127 (294)
T 2dqw_A 56 ERAREMVAEGADIL-DLGAESTRP----GAAPVPVEEEKRRLLPVLEAVLSL-GVPVSVDTR--KPEVAEEALKLGAHLL 127 (294)
T ss_dssp HHHHHHHHHTCSEE-EEECC---------------CCHHHHHHHHHHHHHTT-CSCEEEECS--CHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHCCCCEE-EECCCcCCC----CCCCCCHHHHHHHHHHHHHHHHhC-CCeEEEECC--CHHHHHHHHHhCCCEE
Confidence 67999999999965 776222111 100011 12244444544 899988665 3477889999999988
Q ss_pred E-eCCCCCchhHHHHHHhcCC
Q 021575 119 D-ESEVLTPADEENHINKHNF 138 (310)
Q Consensus 119 i-~~~~~~~~~~~~~i~~~~~ 138 (310)
- .+.. ..++..+.+++++.
T Consensus 128 NdVsg~-~d~~m~~v~a~~~~ 147 (294)
T 2dqw_A 128 NDVTGL-RDERMVALAARHGV 147 (294)
T ss_dssp ECSSCS-CCHHHHHHHHHHTC
T ss_pred EECCCC-CChHHHHHHHHhCC
Confidence 4 3333 44555565555433
No 271
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=94.45 E-value=1.3 Score=40.74 Aligned_cols=88 Identities=13% Similarity=0.024 Sum_probs=55.9
Q ss_pred cccccCCCHHHHHHHHHcCCcEE-EeccCCcccccccCCCCCCCCHHHHHHHHhhcC---cceeeccccCcHHHHHHHHH
Q 021575 37 GVIMDVVTPEQARVAEEAGACAV-MALERVPADIRSQGGVARMSDPQLIKEIKQSVT---IPVMAKARIGHFVEAQILEA 112 (310)
Q Consensus 37 g~i~~~~~~~~A~~~~~~Ga~~i-~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~---iPv~vk~~~~~~~~a~~~~~ 112 (310)
|.+..+.+++.++.+...|+|++ ++++..+..... ....+..+. ..+ .|+++...-....+++.+.+
T Consensus 45 g~~l~i~~p~~~e~a~~~GaD~vilDlEha~~~~e~--------~~~~l~a~~-~~~~~~~~~~VRv~~~~~~di~~~Ld 115 (339)
T 1izc_A 45 GVAHGIPSTFVTKVLAATKPDFVWIDVEHGMFNRLE--------LHDAIHAAQ-HHSEGRSLVIVRVPKHDEVSLSTALD 115 (339)
T ss_dssp EEEECSCCHHHHHHHHHTCCSEEEEETTTSCCCHHH--------HHHHHHHHH-HHTTTCSEEEEECCTTCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHhCCCCEEEEECCCCCCcHHH--------HHHHHHHhh-hcCCCCCeEEEEeCCCCHHHHHHHHh
Confidence 45677789999999999999987 677532221110 022333332 223 67777654333467788889
Q ss_pred cCCCEEEeCCCCCchhHHHHH
Q 021575 113 IGIDYVDESEVLTPADEENHI 133 (310)
Q Consensus 113 aGad~Vi~~~~~~~~~~~~~i 133 (310)
+|+++|+.+...+..++....
T Consensus 116 aGa~gImlP~V~saee~~~~~ 136 (339)
T 1izc_A 116 AGAAGIVIPHVETVEEVREFV 136 (339)
T ss_dssp HTCSEEEETTCCCHHHHHHHH
T ss_pred CCCCEEEeCCCCCHHHHHHHH
Confidence 999999877766666665443
No 272
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=94.40 E-value=2.7 Score=37.70 Aligned_cols=194 Identities=13% Similarity=0.089 Sum_probs=114.2
Q ss_pred cCCCHHH----HHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccC-cHHHHHHHHHcCC
Q 021575 41 DVVTPEQ----ARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIG-HFVEAQILEAIGI 115 (310)
Q Consensus 41 ~~~~~~~----A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~-~~~~a~~~~~aGa 115 (310)
++.+.+. .+++++.+..-|+++.+. ..+ +.|. ......++.+.+.+++||.+..--+ .++.++.+.++|.
T Consensus 24 Nv~n~e~~~avl~AAe~~~sPvIlq~s~~--~~~-y~g~--~~~~~~v~~~a~~~~VPValHlDHg~~~e~i~~ai~~GF 98 (286)
T 1gvf_A 24 NIHNAETIQAILEVCSEMRSPVILAGTPG--TFK-HIAL--EEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGV 98 (286)
T ss_dssp ECCSHHHHHHHHHHHHHHTCCCEEEECTT--HHH-HSCH--HHHHHHHHHHHHHTTSCBEEEEEEECCHHHHHHHHHTTC
T ss_pred eeCCHHHHHHHHHHHHHhCCCEEEECChh--HHh-hcCH--HHHHHHHHHHHHhCCCcEEEEcCCCCCHHHHHHHHHcCC
Confidence 4555554 445567777766666311 111 1111 0112455556667899999864322 5688899999999
Q ss_pred CEEE--eCCCCCch-------hHHHHHHhcCC------C----CcEEE-------ecCCHHHHHHHH-HhCCCEEEEcCC
Q 021575 116 DYVD--ESEVLTPA-------DEENHINKHNF------R----IPFVC-------GCRNLGEALRRI-REGAAMIRTKGE 168 (310)
Q Consensus 116 d~Vi--~~~~~~~~-------~~~~~i~~~~~------~----i~~~v-------~~~t~~ea~~~~-~~Gad~V~v~g~ 168 (310)
+-|- .+. ++.+ ++.++..+.+. | ..-.+ -.++++++.+.. +.|+|.+.+.-.
T Consensus 99 tSVMiDgS~-lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~TgvD~LAvaiG 177 (286)
T 1gvf_A 99 RSAMIDGSH-FPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIG 177 (286)
T ss_dssp CEEEECCTT-SCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC-----------CCSSCCHHHHHHHHHHHCCSEEEECSS
T ss_pred CeEEECCCC-CCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCcccCcccccccccCCCHHHHHHHHHHHCCCEEEeecC
Confidence 9983 332 2322 33344333321 1 01011 025778888865 579998876421
Q ss_pred CCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCE
Q 021575 169 AGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDG 248 (310)
Q Consensus 169 ~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~Gadg 248 (310)
.--| .++ ....-+++.++++++..++|++.=.+.|+ ..+++.++++.|..=
T Consensus 178 t~HG-----------------~Y~-----------~~p~Ld~~~L~~I~~~~~vpLVlHGgSG~-~~e~i~~ai~~Gv~K 228 (286)
T 1gvf_A 178 TAHG-----------------LYS-----------KTPKIDFQRLAEIREVVDVPLVLHGASDV-PDEFVRRTIELGVTK 228 (286)
T ss_dssp CCSS-----------------CCS-----------SCCCCCHHHHHHHHHHCCSCEEECCCTTC-CHHHHHHHHHTTEEE
T ss_pred cccc-----------------CcC-----------CCCccCHHHHHHHHHhcCCCEEEECCCCC-CHHHHHHHHHCCCeE
Confidence 1101 111 01234588999999988999986456677 578899999999999
Q ss_pred EEEccccccCCCHHHHHHHHHHHHhc
Q 021575 249 VFVGSGVFKSGDPVKRAQAIVRAVTH 274 (310)
Q Consensus 249 V~VGsai~~a~dp~~~a~~l~~~i~~ 274 (310)
|=+++.+-. ...+.+++.+.+
T Consensus 229 iNi~Tdl~~-----a~~~~~r~~~~~ 249 (286)
T 1gvf_A 229 VNVATELKI-----AFAGAVKAWFAE 249 (286)
T ss_dssp EEECHHHHH-----HHHHHHHHHHHH
T ss_pred EEEChHHHH-----HHHHHHHHHHHh
Confidence 999988763 344445554443
No 273
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=94.34 E-value=1.2 Score=38.61 Aligned_cols=176 Identities=17% Similarity=0.190 Sum_probs=106.0
Q ss_pred cccCCCHHHHHHHHHcCC-cEEEeccCCccccccc--CCCCCCCCHHHHHHHHhhcCcceeeccccC----cHHHHHHHH
Q 021575 39 IMDVVTPEQARVAEEAGA-CAVMALERVPADIRSQ--GGVARMSDPQLIKEIKQSVTIPVMAKARIG----HFVEAQILE 111 (310)
Q Consensus 39 i~~~~~~~~A~~~~~~Ga-~~i~~L~~~~~~~~~~--~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~----~~~~a~~~~ 111 (310)
+.|-.+.+..+.+.+.|. +++ --||. .+... .|. ...+.++++++.++-||.+...-. ...+++.+.
T Consensus 4 flDtAn~~ei~~~~~~g~i~GV-TTNPs--li~k~~~~g~---~~~~~~~ei~~~v~G~Vs~EV~a~d~e~mi~eA~~L~ 77 (223)
T 3s1x_A 4 FLDTANIDEIRTGVNWGIVDGV-TTNPT--LISKEAVNGK---KYGDIIREILKIVDGPVSVEVVSTKYEGMVEEARKIH 77 (223)
T ss_dssp EEECCCHHHHHHHHHHTCCCEE-ECCHH--HHHHHSCTTC---CHHHHHHHHHHHCSSCEEEECCCCSHHHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHhcCCcccc-cCCHH--HHHhhhccCC---CHHHHHHHHHHhCCCCEEEEEccCCHHHHHHHHHHHH
Confidence 456667888888888885 665 44532 12221 021 124788888888777877754322 246677888
Q ss_pred HcCCCEEE-eCCCCCchhHHHHHHhcCCCCcEEE-ecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceE
Q 021575 112 AIGIDYVD-ESEVLTPADEENHINKHNFRIPFVC-GCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIR 189 (310)
Q Consensus 112 ~aGad~Vi-~~~~~~~~~~~~~i~~~~~~i~~~v-~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~ 189 (310)
+.+-+.++ ++...+--...+.+.+. |+.+.+ -+.+...+..++++|++||...- |.+
T Consensus 78 ~~~~nv~IKIP~T~eGl~A~~~L~~~--GI~vn~TlifS~~QA~~Aa~AGa~yISPfv----gRi--------------- 136 (223)
T 3s1x_A 78 GLGDNAVVKIPMTEDGLRAIKTLSSE--HINTNCTLVFNPIQALLAAKAGVTYVSPFV----GRL--------------- 136 (223)
T ss_dssp HTCTTEEEEEESSHHHHHHHHHHHHT--TCCEEEEEECSHHHHHHHHHTTCSEEEEBS----HHH---------------
T ss_pred HhCCCEEEEeCCCHHHHHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHcCCeEEEeec----chH---------------
Confidence 88766665 44332222333444443 544433 47899999999999999998642 110
Q ss_pred eecccChhHHHHhhhccCCcHHHHHHHh----hc-CCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 021575 190 VLRNMDDDEVFTFAKKIAAPYDLVMQTK----QL-GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 190 ~l~~~~~d~~~~~~~~~~~~~~~i~~i~----~~-~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~ 257 (310)
...+ .++.+.++++. .. .+..|+ ...++++.++.++..+|||.+-+.-.+++
T Consensus 137 --~d~g-----------~dG~~~v~~i~~~~~~~~~~T~Il---aAS~Rn~~~v~~aa~~G~d~~Tip~~vl~ 193 (223)
T 3s1x_A 137 --DDIG-----------EDGMQIIDMIRTIFNNYIIKTQIL---VASIRNPIHVLRSAVIGADVVTVPFNVLK 193 (223)
T ss_dssp --HHTT-----------SCTHHHHHHHHHHHHHTTCCSEEE---EBSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred --hhcC-----------CCHHHHHHHHHHHHHHcCCCCEEE---EEeCCCHHHHHHHHHcCCCEEEeCHHHHH
Confidence 0001 12233333332 21 244454 36789999999999999999998866654
No 274
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=94.31 E-value=0.16 Score=45.37 Aligned_cols=83 Identities=13% Similarity=0.161 Sum_probs=56.0
Q ss_pred HHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhcc-C-------Chhhh
Q 021575 210 YDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHY-S-------DPEVL 281 (310)
Q Consensus 210 ~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~-~-------~~~~~ 281 (310)
++.++.+++.+++||++ -+.|-++.++.++..+|||+|+++.+.+. +. ..+++.+..+++ + .++.+
T Consensus 102 ~~~l~~ir~~v~lPvl~--kdfiid~~qv~~A~~~GAD~VlLi~a~l~---~~-~l~~l~~~a~~lGl~~lvev~t~ee~ 175 (272)
T 3qja_A 102 LDDLDAVRASVSIPVLR--KDFVVQPYQIHEARAHGADMLLLIVAALE---QS-VLVSMLDRTESLGMTALVEVHTEQEA 175 (272)
T ss_dssp HHHHHHHHHHCSSCEEE--ESCCCSHHHHHHHHHTTCSEEEEEGGGSC---HH-HHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred HHHHHHHHHhCCCCEEE--CccccCHHHHHHHHHcCCCEEEEecccCC---HH-HHHHHHHHHHHCCCcEEEEcCCHHHH
Confidence 45677777778999995 35556899999999999999999988884 32 344455554432 1 23333
Q ss_pred hhhhhhcccchhcccCcc
Q 021575 282 AEVSCGLGEAMVGLNLSD 299 (310)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~ 299 (310)
.. ....|-.+.|.|-++
T Consensus 176 ~~-A~~~Gad~IGv~~r~ 192 (272)
T 3qja_A 176 DR-ALKAGAKVIGVNARD 192 (272)
T ss_dssp HH-HHHHTCSEEEEESBC
T ss_pred HH-HHHCCCCEEEECCCc
Confidence 22 234688888877544
No 275
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=94.26 E-value=0.25 Score=43.74 Aligned_cols=38 Identities=24% Similarity=0.391 Sum_probs=31.1
Q ss_pred CCCEEEeCCCCCCCHHHHHHHHH-cCCCEEEEccccccCCCH
Q 021575 221 RLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVGSGVFKSGDP 261 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~~d~~~~l~-~GadgV~VGsai~~a~dp 261 (310)
+++|+ -.|+| +++|+.+++. .+.||++||++-++++++
T Consensus 204 ~vrIl--YGGSV-~~~N~~~l~~~~diDG~LVGgAsL~a~~F 242 (255)
T 1tre_A 204 QVIIQ--YGGSV-NASNAAELFAQPDIDGALVGGASLKADAF 242 (255)
T ss_dssp HCEEE--ECSCC-CTTTHHHHHTSTTCCEEEESGGGGCHHHH
T ss_pred cccEE--EcCCC-CHHHHHHHHcCCCCCeeEecHHHhChHHH
Confidence 47888 46888 6889999996 899999999999975443
No 276
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=94.26 E-value=0.12 Score=46.88 Aligned_cols=87 Identities=11% Similarity=0.145 Sum_probs=50.5
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHH-------HHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEE
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQ-------LIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYV 118 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~-------~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~V 118 (310)
+.|+.+.+.||+.| +++...+... .......+ .++.+++.+++|+++... ..+.++.+.++|++.|
T Consensus 67 ~~a~~~v~~GAdiI-DIGgeStrPg----a~~v~~~eE~~RvvpvI~~l~~~~~vpiSIDT~--~~~V~~aAl~aGa~iI 139 (297)
T 1tx2_A 67 RHAKEMRDEGAHII-DIGGESTRPG----FAKVSVEEEIKRVVPMIQAVSKEVKLPISIDTY--KAEVAKQAIEAGAHII 139 (297)
T ss_dssp HHHHHHHHTTCSEE-EEESCC--------CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEECS--CHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHcCCCEE-EECCCcCCCC----CCCCCHHHHHHHHHHHHHHHHhcCCceEEEeCC--CHHHHHHHHHcCCCEE
Confidence 46888899999965 7762222111 10111122 334455667999998765 3467888888999999
Q ss_pred E-eCCCCCchhHHHHHHhcCCC
Q 021575 119 D-ESEVLTPADEENHINKHNFR 139 (310)
Q Consensus 119 i-~~~~~~~~~~~~~i~~~~~~ 139 (310)
- .+.....+++.+.+++++..
T Consensus 140 Ndvsg~~~d~~m~~~aa~~g~~ 161 (297)
T 1tx2_A 140 NDIWGAKAEPKIAEVAAHYDVP 161 (297)
T ss_dssp EETTTTSSCTHHHHHHHHHTCC
T ss_pred EECCCCCCCHHHHHHHHHhCCc
Confidence 4 33322244555666555433
No 277
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=94.26 E-value=0.19 Score=43.94 Aligned_cols=37 Identities=22% Similarity=0.490 Sum_probs=29.8
Q ss_pred CCCEEEeCCCCCCCHHHHHHHH-HcCCCEEEEccccccCCC
Q 021575 221 RLPVVHFAAGGVATPADAAMMM-QLGCDGVFVGSGVFKSGD 260 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~~d~~~~l-~~GadgV~VGsai~~a~d 260 (310)
+++|+ -+|+| +++++.+++ ..+.||++||++-+++++
T Consensus 188 ~vrIl--YGGSV-~~~N~~~l~~~~diDG~LVGgAsl~a~~ 225 (233)
T 2jgq_A 188 KTPLL--YGGSV-NTQNAKEILGIDSVDGLLIGSASWELEN 225 (233)
T ss_dssp TSCEE--EESSC-CTTTHHHHHTSTTCCEEEESGGGGSHHH
T ss_pred CCcEE--EcCCc-ChhhHHHHhcCCCCCeeEecHHHhChHH
Confidence 58898 36888 578888877 679999999999997443
No 278
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=94.17 E-value=1.4 Score=37.82 Aligned_cols=175 Identities=18% Similarity=0.138 Sum_probs=105.7
Q ss_pred cccCCCHHHHHHHHHcCC-cEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccC----cHHHHHHHHHc
Q 021575 39 IMDVVTPEQARVAEEAGA-CAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIG----HFVEAQILEAI 113 (310)
Q Consensus 39 i~~~~~~~~A~~~~~~Ga-~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~----~~~~a~~~~~a 113 (310)
+.|-.+.+..+.+.+.|. +++ --||. .+...+|. ...+.++++++.++-||.+...-. ...+++.+.+.
T Consensus 4 flDtAn~~ei~~~~~~g~i~GV-TTNPs--li~k~~g~---~~~~~~~eI~~~v~G~Vs~EV~a~d~e~mi~ea~~l~~~ 77 (212)
T 3r8r_A 4 FVDTANIDEIREANELGILAGV-TTNPS--LVAKEANV---SFHDRLREITDVVKGSVSAEVISLKAEEMIEEGKELAKI 77 (212)
T ss_dssp EEECCCHHHHHHHHHTTCEEEE-ECCHH--HHHTSCSS---CHHHHHHHHHHHCCSCEEEECCCSSHHHHHHHHHHHHTT
T ss_pred EEecCCHHHHHHHHhcCCcccc-cCCHH--HHHHccCC---CHHHHHHHHHHhcCCCEEEEEecCCHHHHHHHHHHHHHh
Confidence 456677888888988885 554 44432 23322122 224788888888777887654221 24667777778
Q ss_pred CCCEEE-eCCCCCchhHHHHHHhcCCCCcEEE-ecCCHHHHHHHHHhCCCEEEEc-CCCCCcchHHHHHHHHhhccceEe
Q 021575 114 GIDYVD-ESEVLTPADEENHINKHNFRIPFVC-GCRNLGEALRRIREGAAMIRTK-GEAGTGNIIEAVRHVRSVMGDIRV 190 (310)
Q Consensus 114 Gad~Vi-~~~~~~~~~~~~~i~~~~~~i~~~v-~~~t~~ea~~~~~~Gad~V~v~-g~~~~~~~~~~~~~~r~~~~~~~~ 190 (310)
+-+.++ ++...+--...+.+.+. |+.+-+ -+.+...+..++++|++||... |+.
T Consensus 78 ~~nv~IKIP~T~eGl~A~~~L~~~--GI~vn~TlifS~~Qa~~Aa~AGa~yISPfvgRi--------------------- 134 (212)
T 3r8r_A 78 APNITVKIPMTSDGLKAVRALTDL--GIKTNVTLIFNANQALLAARAGATYVSPFLGRL--------------------- 134 (212)
T ss_dssp CTTEEEEEESSHHHHHHHHHHHHT--TCCEEEEEECSHHHHHHHHHHTCSEEEEBHHHH---------------------
T ss_pred CCCEEEEeCCCHHHHHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHcCCeEEEeccchh---------------------
Confidence 766665 44332222334444443 544433 4789999999999999999864 211
Q ss_pred ecccChhHHHHhhhccCCcHHHHHHHhh----c-CCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 021575 191 LRNMDDDEVFTFAKKIAAPYDLVMQTKQ----L-GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 191 l~~~~~d~~~~~~~~~~~~~~~i~~i~~----~-~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~ 257 (310)
...+ .+..+.++++.+ . .+.-|+ ...++++.++.++..+|||.+-+.-.+++
T Consensus 135 -~d~~-----------~dG~~~v~~i~~~~~~~~~~t~il---aAS~R~~~~v~~~a~~G~d~~Tip~~vl~ 191 (212)
T 3r8r_A 135 -DDIG-----------HNGLDLISEVKQIFDIHGLDTQII---AASIRHPQHVTEAALRGAHIGTMPLKVIH 191 (212)
T ss_dssp -HHTT-----------SCHHHHHHHHHHHHHHHTCCCEEE---EBSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred -hhcC-----------CChHHHHHHHHHHHHHcCCCCEEE---EecCCCHHHHHHHHHcCCCEEEcCHHHHH
Confidence 0001 122333333322 2 244454 36789999999999999999987755543
No 279
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=94.08 E-value=0.19 Score=44.91 Aligned_cols=38 Identities=26% Similarity=0.351 Sum_probs=30.3
Q ss_pred CCCEEEeCCCCCCCHHHHHHHH-HcCCCEEEEccccccCCCH
Q 021575 221 RLPVVHFAAGGVATPADAAMMM-QLGCDGVFVGSGVFKSGDP 261 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~~d~~~~l-~~GadgV~VGsai~~a~dp 261 (310)
+++|+ -+|+| +++++.+++ ..+.||++||++-++++++
T Consensus 222 ~vrIL--YGGSV-~~~N~~el~~~~diDG~LVGgASLka~~F 260 (275)
T 1mo0_A 222 ATRII--YGGSV-TADNAAELGKKPDIDGFLVGGASLKPDFV 260 (275)
T ss_dssp HSCEE--EESSC-CTTTHHHHTTSTTCCEEEESGGGGSTHHH
T ss_pred cccEE--EcCCC-CHhhHHHHhcCCCCCeeEechHHhChHHH
Confidence 47898 36888 588888877 6799999999999985443
No 280
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=93.97 E-value=0.26 Score=43.41 Aligned_cols=37 Identities=27% Similarity=0.363 Sum_probs=30.0
Q ss_pred CCCEEEeCCCCCCCHHHHHHHH-HcCCCEEEEccccccCCC
Q 021575 221 RLPVVHFAAGGVATPADAAMMM-QLGCDGVFVGSGVFKSGD 260 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~~d~~~~l-~~GadgV~VGsai~~a~d 260 (310)
+++|+ -.|+| +++++.+++ ..+.||++||++-+++++
T Consensus 203 ~vrIl--YGGSV-~~~N~~~l~~~~diDG~LVGgAsL~a~~ 240 (248)
T 1r2r_A 203 STRII--YGGSV-TGATCKELASQPDVDGFLVGGASLKPEF 240 (248)
T ss_dssp HCCEE--ECSCC-CTTTHHHHHTSTTCCEEEESGGGGSTHH
T ss_pred cccEE--EcCCc-CHhHHHHHHcCCCCCeeEechHHhChHH
Confidence 47898 46888 588888877 679999999999998544
No 281
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=93.90 E-value=0.12 Score=44.16 Aligned_cols=79 Identities=20% Similarity=0.201 Sum_probs=54.1
Q ss_pred cccCCCHHHHHHHHHcCCcEEEecc-CCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCE
Q 021575 39 IMDVVTPEQARVAEEAGACAVMALE-RVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDY 117 (310)
Q Consensus 39 i~~~~~~~~A~~~~~~Ga~~i~~L~-~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~ 117 (310)
+.++.+++.++.+.+.|++.+ .++ +..+.... .+.......+.++++++.+++|+++...+...+++..+.++|||+
T Consensus 123 ~~~~~t~~e~~~~~~~G~d~i-~~~~~g~t~~~~-~~~~~~~~~~~~~~~~~~~~ipvia~GGI~~~~~~~~~~~~Gad~ 200 (223)
T 1y0e_A 123 MADIATVEEAKNAARLGFDYI-GTTLHGYTSYTQ-GQLLYQNDFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMDLGVHC 200 (223)
T ss_dssp EEECSSHHHHHHHHHTTCSEE-ECTTTTSSTTST-TCCTTHHHHHHHHHHHHHCCSEEEEESSCCSHHHHHHHHHTTCSE
T ss_pred EecCCCHHHHHHHHHcCCCEE-EeCCCcCcCCCC-CCCCCcccHHHHHHHHhhCCCCEEEecCCCCHHHHHHHHHcCCCE
Confidence 346678888889999999976 432 11111111 110011224678888888899999988886668889999999999
Q ss_pred EE
Q 021575 118 VD 119 (310)
Q Consensus 118 Vi 119 (310)
|.
T Consensus 201 v~ 202 (223)
T 1y0e_A 201 SV 202 (223)
T ss_dssp EE
T ss_pred EE
Confidence 96
No 282
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=93.81 E-value=2 Score=36.08 Aligned_cols=103 Identities=14% Similarity=0.081 Sum_probs=61.5
Q ss_pred HHHHHHHHHcCCCEEEe-CCCCCchhHHHHH-HhcCCCCcEEE-ecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHH
Q 021575 104 FVEAQILEAIGIDYVDE-SEVLTPADEENHI-NKHNFRIPFVC-GCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRH 180 (310)
Q Consensus 104 ~~~a~~~~~aGad~Vi~-~~~~~~~~~~~~i-~~~~~~i~~~v-~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~ 180 (310)
.+.++.+.+.|++.+.. ....+..+..+.+ +..+..+.+.. .+.+.+++..+.++|+|.|.+ +. .
T Consensus 22 ~~~~~~~~~~G~~~i~l~~~~~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~-~~---~-------- 89 (212)
T 2v82_A 22 LAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVT-PN---I-------- 89 (212)
T ss_dssp HHHHHHHHHHTCCEEEEETTSTTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEEEC-SS---C--------
T ss_pred HHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEEEe-CC---C--------
Confidence 35677888899999953 2222222222323 22322333322 245677888888999998852 11 0
Q ss_pred HHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEE
Q 021575 181 VRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFV 251 (310)
Q Consensus 181 ~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~V 251 (310)
+.++++..++ ...+++ + |+.|++++.++.+.|+|.|.+
T Consensus 90 ----------------------------~~~~~~~~~~-~g~~~~-~---g~~t~~e~~~a~~~G~d~v~v 127 (212)
T 2v82_A 90 ----------------------------HSEVIRRAVG-YGMTVC-P---GCATATEAFTALEAGAQALKI 127 (212)
T ss_dssp ----------------------------CHHHHHHHHH-TTCEEE-C---EECSHHHHHHHHHTTCSEEEE
T ss_pred ----------------------------CHHHHHHHHH-cCCCEE-e---ecCCHHHHHHHHHCCCCEEEE
Confidence 1223333333 345554 2 389999999999999999986
No 283
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=93.71 E-value=0.51 Score=41.56 Aligned_cols=41 Identities=22% Similarity=0.406 Sum_probs=33.5
Q ss_pred CCCEEEeCCCCCCCHHHHHHHHH-cCCCEEEEccccccCCCHHHHH
Q 021575 221 RLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVGSGVFKSGDPVKRA 265 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~~d~~~~l~-~GadgV~VGsai~~a~dp~~~a 265 (310)
+++|+ -+|+| +++|+.+++. .+.||++||++-++ +++....
T Consensus 203 ~vrIl--YGGSV-~~~N~~~l~~~~diDG~LVGgAsL~-~~F~~ii 244 (248)
T 1o5x_A 203 QIRIL--YGGSV-NTENCSSLIQQEDIDGFLVGNASLK-ESFVDII 244 (248)
T ss_dssp HSEEE--ECSCC-CTTTHHHHHTSTTCCEEEECGGGGS-TTHHHHH
T ss_pred cceEE--EcCCC-CHHHHHHHHcCCCCCeeEeeHHHHH-HHHHHHH
Confidence 47888 46888 5889999996 89999999999999 8865443
No 284
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=93.69 E-value=3.5 Score=36.49 Aligned_cols=94 Identities=9% Similarity=-0.001 Sum_probs=48.3
Q ss_pred cccCCCHHHHHHHHHcCCcEEEeccCCcccccccC-CCCCCCCH----HHHHHHHhhcCcce-eeccccC-c--H----H
Q 021575 39 IMDVVTPEQARVAEEAGACAVMALERVPADIRSQG-GVARMSDP----QLIKEIKQSVTIPV-MAKARIG-H--F----V 105 (310)
Q Consensus 39 i~~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~-G~~~~~~~----~~i~~i~~~~~iPv-~vk~~~~-~--~----~ 105 (310)
+...=|+..|+.++++|++.+. .-..-... ..| -+....++ ...+.+++.++.|+ ++...++ + . .
T Consensus 21 ~~tayD~~sA~l~e~aG~d~il-vGdsl~~~-~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~ 98 (264)
T 1m3u_A 21 TITAYDYSFAKLFADEGLNVML-VGDSLGMT-VQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFE 98 (264)
T ss_dssp EEECCSHHHHHHHHHHTCCEEE-ECTTHHHH-TTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSSHHHHHH
T ss_pred EEeCcCHHHHHHHHHcCCCEEE-ECHHHHHH-HcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCCHHHHHH
Confidence 3444577899999999999872 21000000 001 01111112 34556677777654 5444443 2 1 2
Q ss_pred HHHHHHHcCCCEEEeCCCCCchhHHHHHH
Q 021575 106 EAQILEAIGIDYVDESEVLTPADEENHIN 134 (310)
Q Consensus 106 ~a~~~~~aGad~Vi~~~~~~~~~~~~~i~ 134 (310)
.+..+.++||++|-.-+..+..+.++.+.
T Consensus 99 ~a~rl~kaGa~aVklEgg~e~~~~I~al~ 127 (264)
T 1m3u_A 99 NAATVMRAGANMVKIEGGEWLVETVQMLT 127 (264)
T ss_dssp HHHHHHHTTCSEEECCCSGGGHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCcHHHHHHHHHHH
Confidence 33467779999995333333334444443
No 285
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=93.68 E-value=2.5 Score=37.82 Aligned_cols=96 Identities=11% Similarity=0.088 Sum_probs=49.5
Q ss_pred cccCCCHHHHHHHHHcCCcEEEeccCCc-cccccc--CCCCCCCCHHHHHHHHhhcCcceeec-cccC-c---HHH----
Q 021575 39 IMDVVTPEQARVAEEAGACAVMALERVP-ADIRSQ--GGVARMSDPQLIKEIKQSVTIPVMAK-ARIG-H---FVE---- 106 (310)
Q Consensus 39 i~~~~~~~~A~~~~~~Ga~~i~~L~~~~-~~~~~~--~G~~~~~~~~~i~~i~~~~~iPv~vk-~~~~-~---~~~---- 106 (310)
+...=|+..|+.++++|++.+..=+... ...... ....+.......+.+++.++.|+++- ..++ + .+.
T Consensus 38 ~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~n 117 (281)
T 1oy0_A 38 MLTAYDYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAALAA 117 (281)
T ss_dssp EEECCSHHHHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECCTTSSTTCHHHHHHH
T ss_pred EEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECCCCcccCCHHHHHHH
Confidence 4444577899999999999872101000 000000 01112223457778888888776654 3332 2 222
Q ss_pred -HHHHHHcCCCEEEeCCCCCchhHHHHHH
Q 021575 107 -AQILEAIGIDYVDESEVLTPADEENHIN 134 (310)
Q Consensus 107 -a~~~~~aGad~Vi~~~~~~~~~~~~~i~ 134 (310)
.+.+.++||++|-.-+..+..+.++.+.
T Consensus 118 a~rl~~eaGa~aVklEdg~e~~~~I~al~ 146 (281)
T 1oy0_A 118 ATRFLKDGGAHAVKLEGGERVAEQIACLT 146 (281)
T ss_dssp HHHHHHTTCCSEEEEEBSGGGHHHHHHHH
T ss_pred HHHHHHHhCCeEEEECCcHHHHHHHHHHH
Confidence 3445559999994333323334444443
No 286
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=93.67 E-value=0.33 Score=44.15 Aligned_cols=119 Identities=18% Similarity=0.140 Sum_probs=65.9
Q ss_pred HHHHHHHHcCCcEEEeccCC--cccccccCCCCCCCCHHHHHHHHhhc--CcceeeccccC---------cHHHHHHHHH
Q 021575 46 EQARVAEEAGACAVMALERV--PADIRSQGGVARMSDPQLIKEIKQSV--TIPVMAKARIG---------HFVEAQILEA 112 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~--~~~~~~~~G~~~~~~~~~i~~i~~~~--~iPv~vk~~~~---------~~~~a~~~~~ 112 (310)
+.++.++++|+.++ .|+.+ |+.....+|.......+.+.+|+... +.++.+.-|.. ..++++.+.+
T Consensus 108 ~~v~~l~~aGaagv-~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~~~~I~ARtda~~~~g~~~ai~Ra~ay~e 186 (305)
T 3ih1_A 108 RTAVEMVEAKVAAV-QIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAPSLYIVARTDARGVEGLDEAIERANAYVK 186 (305)
T ss_dssp HHHHHHHHTTCSEE-EEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEEEEECCHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcEE-EECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCCCeEEEEeeccccccCHHHHHHHHHHHHH
Confidence 45788899999997 77633 22111112222233334555654332 66666654432 1366788999
Q ss_pred cCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEec----CC-HHHHHHHHHhCCCEEEEcC
Q 021575 113 IGIDYVDESEVLTPADEENHINKHNFRIPFVCGC----RN-LGEALRRIREGAAMIRTKG 167 (310)
Q Consensus 113 aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~----~t-~~ea~~~~~~Gad~V~v~g 167 (310)
+|||.|......++.++.+..+.. .+++++-. .+ .-....+.++|+..|...+
T Consensus 187 AGAD~i~~e~~~~~~~~~~i~~~~--~~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~ 244 (305)
T 3ih1_A 187 AGADAIFPEALQSEEEFRLFNSKV--NAPLLANMTEFGKTPYYSAEEFANMGFQMVIYPV 244 (305)
T ss_dssp HTCSEEEETTCCSHHHHHHHHHHS--CSCBEEECCTTSSSCCCCHHHHHHTTCSEEEECS
T ss_pred cCCCEEEEcCCCCHHHHHHHHHHc--CCCEEEeecCCCCCCCCCHHHHHHcCCCEEEEch
Confidence 999999754433345555554442 33443211 11 0124556788999987643
No 287
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=93.61 E-value=0.22 Score=43.99 Aligned_cols=36 Identities=22% Similarity=0.442 Sum_probs=30.4
Q ss_pred CCCEEEeCCCCCCCHHHHHHHH-HcCCCEEEEccccccCC
Q 021575 221 RLPVVHFAAGGVATPADAAMMM-QLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~~d~~~~l-~~GadgV~VGsai~~a~ 259 (310)
+++|++ +|+| +++|+.+++ ..+.||++||++-++++
T Consensus 204 ~vrIlY--GGSV-~~~N~~~l~~~~diDG~LVGgAsL~a~ 240 (252)
T 2btm_A 204 AIRIQY--GGSV-KPDNIRDFLAQQQIDGALVGGASLEPA 240 (252)
T ss_dssp TSEEEE--ESSC-CTTTHHHHHTSTTCCEEEESGGGSSHH
T ss_pred ceeEEE--cCCC-CHHHHHHHHcCCCCCeeEecHHHhChH
Confidence 588883 6888 579999999 68999999999999743
No 288
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=93.61 E-value=0.54 Score=42.79 Aligned_cols=117 Identities=17% Similarity=0.174 Sum_probs=72.3
Q ss_pred cCcceeec--cccCcHHHHHHHHHcCCCEEEeCCCCC-chhHHHHHHh---c---CCCCcEEEe----cCCH-HHHHHHH
Q 021575 91 VTIPVMAK--ARIGHFVEAQILEAIGIDYVDESEVLT-PADEENHINK---H---NFRIPFVCG----CRNL-GEALRRI 156 (310)
Q Consensus 91 ~~iPv~vk--~~~~~~~~a~~~~~aGad~Vi~~~~~~-~~~~~~~i~~---~---~~~i~~~v~----~~t~-~ea~~~~ 156 (310)
...|++.. ..+...+.+..+.++|.-+++...... +.++.+.+++ . .+++.+++. ..+. +.+..+.
T Consensus 14 ~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~ 93 (328)
T 2gjl_A 14 VEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAII 93 (328)
T ss_dssp CSSSEEECCCTTTCSHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHH
T ss_pred CCCCEEECCCCCCCcHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHH
Confidence 56787763 223356778888889977776443333 5554443332 1 123333433 1233 4455567
Q ss_pred HhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHH
Q 021575 157 REGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPA 236 (310)
Q Consensus 157 ~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~ 236 (310)
+.|+++|.++.. .+.+.++.+++. .+|++ ..+.+++
T Consensus 94 ~~g~d~V~~~~g---------------------------------------~p~~~~~~l~~~-gi~vi----~~v~t~~ 129 (328)
T 2gjl_A 94 EAGIRVVETAGN---------------------------------------DPGEHIAEFRRH-GVKVI----HKCTAVR 129 (328)
T ss_dssp HTTCCEEEEEES---------------------------------------CCHHHHHHHHHT-TCEEE----EEESSHH
T ss_pred hcCCCEEEEcCC---------------------------------------CcHHHHHHHHHc-CCCEE----eeCCCHH
Confidence 889999987642 123445556653 67776 3477899
Q ss_pred HHHHHHHcCCCEEEE
Q 021575 237 DAAMMMQLGCDGVFV 251 (310)
Q Consensus 237 d~~~~l~~GadgV~V 251 (310)
++.++.+.|+|++++
T Consensus 130 ~a~~~~~~GaD~i~v 144 (328)
T 2gjl_A 130 HALKAERLGVDAVSI 144 (328)
T ss_dssp HHHHHHHTTCSEEEE
T ss_pred HHHHHHHcCCCEEEE
Confidence 999988999999998
No 289
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=93.60 E-value=2.9 Score=37.21 Aligned_cols=95 Identities=11% Similarity=0.056 Sum_probs=47.7
Q ss_pred cccCCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH----HHHHHHHhhcCccee-eccccC-c---H----H
Q 021575 39 IMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDP----QLIKEIKQSVTIPVM-AKARIG-H---F----V 105 (310)
Q Consensus 39 i~~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~----~~i~~i~~~~~iPv~-vk~~~~-~---~----~ 105 (310)
+...=|+..|+.++++|++.+. .-..-...-...-+....++ ...+.+++.++.|++ +...++ + . .
T Consensus 21 ~~tayDa~sA~l~e~aG~d~il-vGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~ 99 (275)
T 1o66_A 21 MLTAYESSFAALMDDAGVEMLL-VGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFA 99 (275)
T ss_dssp EEECCSHHHHHHHHHTTCCEEE-ECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSSCHHHHHH
T ss_pred EEeCcCHHHHHHHHHcCCCEEE-ECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccCCHHHHHH
Confidence 4444577899999999999872 11000000000001111122 355566777776644 444432 2 1 2
Q ss_pred HHHHHHHcCCCEEEeCCCCCchhHHHHHH
Q 021575 106 EAQILEAIGIDYVDESEVLTPADEENHIN 134 (310)
Q Consensus 106 ~a~~~~~aGad~Vi~~~~~~~~~~~~~i~ 134 (310)
.+..+.++||++|-.-+..+..+.++.+.
T Consensus 100 na~rl~kaGa~aVklEdg~e~~~~I~al~ 128 (275)
T 1o66_A 100 AAAELMAAGAHMVKLEGGVWMAETTEFLQ 128 (275)
T ss_dssp HHHHHHHTTCSEEEEECSGGGHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCcHHHHHHHHHHH
Confidence 23467779999994333323334444443
No 290
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=93.53 E-value=1.7 Score=39.13 Aligned_cols=208 Identities=13% Similarity=0.073 Sum_probs=107.7
Q ss_pred HHHHHHHHcCCcEEEecc-C-CcccccccCCCCCCCCH-HHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEEeCC
Q 021575 46 EQARVAEEAGACAVMALE-R-VPADIRSQGGVARMSDP-QLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESE 122 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~-~-~~~~~~~~~G~~~~~~~-~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi~~~ 122 (310)
+.++++.+.|.+.| +.- + .|+.+.. +.+. +.++.+.+..++|+.+-.. ..+.++.+.++|++.|....
T Consensus 34 ~i~~~L~~~Gv~~I-E~g~~~~~~~~~~------~~d~~~~~~~~~~~~~~~~~~l~~--~~~~i~~a~~aG~~~v~i~~ 104 (302)
T 2ftp_A 34 RLVDDLSAAGLDYI-EVGSFVSPKWVPQ------MAGSAEVFAGIRQRPGVTYAALAP--NLKGFEAALESGVKEVAVFA 104 (302)
T ss_dssp HHHHHHHHTTCSEE-EEEECSCTTTCGG------GTTHHHHHHHSCCCTTSEEEEECC--SHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHcCcCEE-EECCCcCcccccc------ccCHHHHHHHhhhcCCCEEEEEeC--CHHHHHHHHhCCcCEEEEEE
Confidence 56888999999976 321 1 1111111 1122 3334444444667765442 45788999999999984211
Q ss_pred C-----------CCc-------hhHHHHHHhcCCCCcEEE----e-----cCCHHHHHHHH----HhCCCEEEEcCCCCC
Q 021575 123 V-----------LTP-------ADEENHINKHNFRIPFVC----G-----CRNLGEALRRI----REGAAMIRTKGEAGT 171 (310)
Q Consensus 123 ~-----------~~~-------~~~~~~i~~~~~~i~~~v----~-----~~t~~ea~~~~----~~Gad~V~v~g~~~~ 171 (310)
. .+. .+..+.+++++..+...+ + -.+++++.+.. +.|+|.|.+.-..+.
T Consensus 105 ~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~ 184 (302)
T 2ftp_A 105 AASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLGDTIGV 184 (302)
T ss_dssp ESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEEESSSC
T ss_pred ecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCC
Confidence 1 121 233344443333222111 1 13555555433 578887765422111
Q ss_pred cchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcC-CCCEEEeC--CCCCCCHHHHHHHHHcCCCE
Q 021575 172 GNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG-RLPVVHFA--AGGVATPADAAMMMQLGCDG 248 (310)
Q Consensus 172 ~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~-~iPVi~iA--~GGI~t~~d~~~~l~~Gadg 248 (310)
.. |. ...++++.+++.. ++|+.+=. ..|. ...+...++++|++-
T Consensus 185 ~~----------------------P~----------~~~~lv~~l~~~~~~~~l~~H~Hn~~Gl-a~An~laAv~aGa~~ 231 (302)
T 2ftp_A 185 GT----------------------AG----------ATRRLIEAVASEVPRERLAGHFHDTYGQ-ALANIYASLLEGIAV 231 (302)
T ss_dssp CC----------------------HH----------HHHHHHHHHTTTSCGGGEEEEEBCTTSC-HHHHHHHHHHTTCCE
T ss_pred cC----------------------HH----------HHHHHHHHHHHhCCCCeEEEEeCCCccH-HHHHHHHHHHhCCCE
Confidence 11 11 1145677777655 57775323 6787 478888999999998
Q ss_pred EEEccccc--------cCCCHHHHHHHHHHHHhc-----cCChhhhhhhhhhcccchhcccCc
Q 021575 249 VFVGSGVF--------KSGDPVKRAQAIVRAVTH-----YSDPEVLAEVSCGLGEAMVGLNLS 298 (310)
Q Consensus 249 V~VGsai~--------~a~dp~~~a~~l~~~i~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 298 (310)
|=+.=.=+ ++.|+. .+.++..++. ..+-+.+.++++.+.+.. |+.++
T Consensus 232 vd~tv~GlG~cp~a~gr~GN~~--~E~lv~~l~~~g~~~~idl~~l~~~~~~~~~~~-~~~~~ 291 (302)
T 2ftp_A 232 FDSSVAGLGGCPYAKGATGNVA--SEDVLYLLNGLEIHTGVDMHALVDAGQRICAVL-GKSNG 291 (302)
T ss_dssp EEEBGGGCCBCGGGTTCBCBCB--HHHHHHHHHHTTCBCCCCHHHHHHHHHHHHHHH-CCCCS
T ss_pred EEecccccCCCCCCCCCCCChh--HHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHh-CCCCC
Confidence 76432101 345552 3334444433 234556666666665533 44433
No 291
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=93.45 E-value=4.1 Score=36.56 Aligned_cols=83 Identities=14% Similarity=0.212 Sum_probs=46.8
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGad 116 (310)
..++.+.+.|+++++.+. . .|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|||
T Consensus 37 ~lv~~li~~Gv~gl~v~G-t------TGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gad 109 (301)
T 1xky_A 37 KLVNYLIDNGTTAIVVGG-T------TGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVD 109 (301)
T ss_dssp HHHHHHHHTTCCEEEESS-T------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEECc-c------ccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCC
Confidence 467777899999985441 1 1101012111 2333334433 589998765432 3567788889999
Q ss_pred EEE-eCCC---CCchhHHHHHHh
Q 021575 117 YVD-ESEV---LTPADEENHINK 135 (310)
Q Consensus 117 ~Vi-~~~~---~~~~~~~~~i~~ 135 (310)
+++ .+.. .+..++.+..+.
T Consensus 110 avlv~~P~y~~~s~~~l~~~f~~ 132 (301)
T 1xky_A 110 AVMLVAPYYNKPSQEGMYQHFKA 132 (301)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHH
T ss_pred EEEEcCCCCCCCCHHHHHHHHHH
Confidence 996 4432 244555555443
No 292
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=93.41 E-value=1.8 Score=39.96 Aligned_cols=174 Identities=14% Similarity=0.111 Sum_probs=96.9
Q ss_pred HHHHHHHHcCCcEE-Eecc-CCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEE-EeCC
Q 021575 46 EQARVAEEAGACAV-MALE-RVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYV-DESE 122 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i-~~L~-~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~V-i~~~ 122 (310)
++|+++.++|++.+ .+.. |-... ..+.|-. ...++.+++.++.+++|++.-.. +...++.+.+. +|.+ +.+.
T Consensus 124 ~~a~~~k~aGa~~vr~q~fKprTs~-~~f~glg-~egl~~l~~~~~e~Gl~~~te~~--d~~~~~~l~~~-vd~lkIgAr 198 (350)
T 1vr6_A 124 ETAHFLSELGVKVLRGGAYKPRTSP-YSFQGLG-EKGLEYLREAADKYGMYVVTEAL--GEDDLPKVAEY-ADIIQIGAR 198 (350)
T ss_dssp HHHHHHHHTTCCEEECBSCCCCCST-TSCCCCT-HHHHHHHHHHHHHHTCEEEEECS--SGGGHHHHHHH-CSEEEECGG
T ss_pred HHHHHHHHcCCCeeeeeEEeCCCCh-HhhcCCC-HHHHHHHHHHHHHcCCcEEEEeC--CHHHHHHHHHh-CCEEEECcc
Confidence 46778888999986 3332 21110 1111110 11245666667778999987443 23456666677 8998 5666
Q ss_pred CCCchhHHHHHHhcCCCCcEEEe--cC-CHHHHHHHHH----hCC-CEEEE-cCC-CCCcchHHHHHHHHhhccceEeec
Q 021575 123 VLTPADEENHINKHNFRIPFVCG--CR-NLGEALRRIR----EGA-AMIRT-KGE-AGTGNIIEAVRHVRSVMGDIRVLR 192 (310)
Q Consensus 123 ~~~~~~~~~~i~~~~~~i~~~v~--~~-t~~ea~~~~~----~Ga-d~V~v-~g~-~~~~~~~~~~~~~r~~~~~~~~l~ 192 (310)
.+...++.+.+.+ .+.+++++ .. |.+|...+++ .|. +++-+ +|. .| +
T Consensus 199 ~~~n~~LL~~va~--~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~ty---------------------p 255 (350)
T 1vr6_A 199 NAQNFRLLSKAGS--YNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTF---------------------E 255 (350)
T ss_dssp GTTCHHHHHHHHT--TCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCS---------------------C
T ss_pred cccCHHHHHHHHc--cCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCC---------------------C
Confidence 6777777666653 56777775 33 7778776654 466 44433 332 12 1
Q ss_pred ccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCC--CCCCC--HHHHHHHHHcCCCEEEEccccc
Q 021575 193 NMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAA--GGVAT--PADAAMMMQLGCDGVFVGSGVF 256 (310)
Q Consensus 193 ~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~--GGI~t--~~d~~~~l~~GadgV~VGsai~ 256 (310)
+-.+ ...++..+..+++..++||+..++ +|-+. ..-...+..+||+|+++=+-+.
T Consensus 256 ~~~~---------~~vdl~ai~~lk~~~~lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~ 314 (350)
T 1vr6_A 256 KATR---------NTLDISAVPIIRKESHLPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPE 314 (350)
T ss_dssp CSSS---------SBCCTTHHHHHHHHBSSCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBCSC
T ss_pred CcCh---------hhhhHHHHHHHHHhhCCCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEEEecCC
Confidence 1000 122344455566656789863211 14222 2224445678999999887654
No 293
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=93.40 E-value=2.3 Score=39.73 Aligned_cols=133 Identities=8% Similarity=0.035 Sum_probs=82.5
Q ss_pred HHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEE-EeCCCCCchhHHHHHHhcCCCCcEEEe--cCCHHHHHHHHH
Q 021575 81 PQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYV-DESEVLTPADEENHINKHNFRIPFVCG--CRNLGEALRRIR 157 (310)
Q Consensus 81 ~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~V-i~~~~~~~~~~~~~i~~~~~~i~~~v~--~~t~~ea~~~~~ 157 (310)
...+.+.++..+++++.-.+ +.+.++.+.+.|+|.+ +.+..+...++.+.+.+ .+.+++++ ..|.+|...+++
T Consensus 103 ~~~L~~~~~~~Gi~~~stpf--D~~svd~l~~~~vd~~KIgS~~~~N~pLL~~va~--~gKPViLStGmaTl~Ei~~Ave 178 (385)
T 1vli_A 103 ILPLLDYCREKQVIFLSTVC--DEGSADLLQSTSPSAFKIASYEINHLPLLKYVAR--LNRPMIFSTAGAEISDVHEAWR 178 (385)
T ss_dssp HHHHHHHHHHTTCEEECBCC--SHHHHHHHHTTCCSCEEECGGGTTCHHHHHHHHT--TCSCEEEECTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEccC--CHHHHHHHHhcCCCEEEECcccccCHHHHHHHHh--cCCeEEEECCCCCHHHHHHHHH
Confidence 45666667778999885443 3466778888999999 66666777778777765 45566654 568988877654
Q ss_pred ----hCC-CEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcC-CCCEEEeCCCC
Q 021575 158 ----EGA-AMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG-RLPVVHFAAGG 231 (310)
Q Consensus 158 ----~Ga-d~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~-~iPVi~iA~GG 231 (310)
.|. +++-+|+.. -+|+ .++ ..++..+..+++.. ++||.. ++=
T Consensus 179 ~i~~~Gn~~iiLlhc~s--------------------~YPt-p~~---------~~nL~aI~~Lk~~f~~lpVG~--SdH 226 (385)
T 1vli_A 179 TIRAEGNNQIAIMHCVA--------------------KYPA-PPE---------YSNLSVIPMLAAAFPEAVIGF--SDH 226 (385)
T ss_dssp HHHTTTCCCEEEEEECS--------------------SSSC-CGG---------GCCTTHHHHHHHHSTTSEEEE--EEC
T ss_pred HHHHCCCCcEEEEeccC--------------------CCCC-Chh---------hcCHHHHHHHHHHcCCCCEEe--CCC
Confidence 476 676666421 1121 111 12344566677766 789863 222
Q ss_pred CCC-HHHHHHHHHcCCCEE
Q 021575 232 VAT-PADAAMMMQLGCDGV 249 (310)
Q Consensus 232 I~t-~~d~~~~l~~GadgV 249 (310)
-.. ..-...+..+||+-|
T Consensus 227 t~G~~~~~~AAvAlGA~iI 245 (385)
T 1vli_A 227 SEHPTEAPCAAVRLGAKLI 245 (385)
T ss_dssp CSSSSHHHHHHHHTTCSEE
T ss_pred CCCchHHHHHHHHcCCCEE
Confidence 112 344555668999933
No 294
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=93.39 E-value=0.63 Score=41.72 Aligned_cols=86 Identities=16% Similarity=0.134 Sum_probs=47.9
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH-------HHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEE
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP-------QLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYV 118 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~-------~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~V 118 (310)
+.|+.+.+.||+.| +++...+.. |....... ..++.+++. ++|+.+..+ ..+.++.+.++|++.|
T Consensus 33 ~~a~~~v~~GAdiI-DIGgestrp----ga~~v~~~eE~~Rv~pvi~~l~~~-~~piSIDT~--~~~va~aAl~aGa~iI 104 (280)
T 1eye_A 33 KHGLAMAAAGAGIV-DVGGESSRP----GATRVDPAVETSRVIPVVKELAAQ-GITVSIDTM--RADVARAALQNGAQMV 104 (280)
T ss_dssp HHHHHHHHTTCSEE-EEECC------------------HHHHHHHHHHHHHT-TCCEEEECS--CHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHCCCCEE-EECCccCCC----CCCCCCHHHHHHHHHHHHHHhhcC-CCEEEEeCC--CHHHHHHHHHcCCCEE
Confidence 56889999999965 776221111 11011112 233334443 899988665 3477899999999999
Q ss_pred E-eCCCCCchhHHHHHHhcCCC
Q 021575 119 D-ESEVLTPADEENHINKHNFR 139 (310)
Q Consensus 119 i-~~~~~~~~~~~~~i~~~~~~ 139 (310)
- .+.....++..+.+++++..
T Consensus 105 Ndvsg~~~d~~m~~~~a~~~~~ 126 (280)
T 1eye_A 105 NDVSGGRADPAMGPLLAEADVP 126 (280)
T ss_dssp EETTTTSSCTTHHHHHHHHTCC
T ss_pred EECCCCCCCHHHHHHHHHhCCe
Confidence 4 33222234555555554433
No 295
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=93.39 E-value=4.6 Score=36.86 Aligned_cols=82 Identities=18% Similarity=0.090 Sum_probs=45.9
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGad 116 (310)
..++.+.+.|+++|+.+. . .|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|||
T Consensus 59 ~lv~~li~~Gv~Gl~v~G-t------TGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gad 131 (332)
T 2r8w_A 59 ALIARLDAAEVDSVGILG-S------TGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGAD 131 (332)
T ss_dssp HHHHHHHHHTCSEEEESS-T------TTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEECc-c------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 457777889999985441 1 1101012111 2333334443 589998765432 3567788889999
Q ss_pred EEE-eCCC---CCchhHHHHHH
Q 021575 117 YVD-ESEV---LTPADEENHIN 134 (310)
Q Consensus 117 ~Vi-~~~~---~~~~~~~~~i~ 134 (310)
+++ .+.. .+..++.++.+
T Consensus 132 avlv~~P~Y~~~s~~~l~~~f~ 153 (332)
T 2r8w_A 132 ALLLAPVSYTPLTQEEAYHHFA 153 (332)
T ss_dssp EEEECCCCSSCCCHHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHH
Confidence 996 3332 23445555543
No 296
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=93.38 E-value=3.7 Score=37.83 Aligned_cols=132 Identities=9% Similarity=-0.020 Sum_probs=83.2
Q ss_pred HHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEE-EeCCCCCchhHHHHHHhcCCCCcEEEe--cCCHHHHHHHHH-
Q 021575 82 QLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYV-DESEVLTPADEENHINKHNFRIPFVCG--CRNLGEALRRIR- 157 (310)
Q Consensus 82 ~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~V-i~~~~~~~~~~~~~i~~~~~~i~~~v~--~~t~~ea~~~~~- 157 (310)
..+.+.++..+++++.-.+ +.+.++.+.+.|+|.+ +.+..+...++.+.+.+ .+.+++++ ..|.+|...+++
T Consensus 94 ~~L~~~~~~~Gi~~~st~~--d~~svd~l~~~~v~~~KI~S~~~~n~~LL~~va~--~gkPviLstGmat~~Ei~~Ave~ 169 (349)
T 2wqp_A 94 IKLKEYVESKGMIFISTLF--SRAAALRLQRMDIPAYKIGSGECNNYPLIKLVAS--FGKPIILSTGMNSIESIKKSVEI 169 (349)
T ss_dssp HHHHHHHHHTTCEEEEEEC--SHHHHHHHHHHTCSCEEECGGGTTCHHHHHHHHT--TCSCEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCeEEEeeC--CHHHHHHHHhcCCCEEEECcccccCHHHHHHHHh--cCCeEEEECCCCCHHHHHHHHHH
Confidence 3444556678999885443 3466778888999999 66667777788777765 45566554 568888777654
Q ss_pred ---hCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcC-CCCEEEeCCCCCC
Q 021575 158 ---EGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG-RLPVVHFAAGGVA 233 (310)
Q Consensus 158 ---~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~-~iPVi~iA~GGI~ 233 (310)
.|.+++-+|+.. -+|+ .+ ...++..+..+++.. ++||.. ++=-.
T Consensus 170 i~~~G~~iiLlhc~s--------------------~Yp~-~~---------~~~nL~ai~~lk~~f~~lpVg~--sdHt~ 217 (349)
T 2wqp_A 170 IREAGVPYALLHCTN--------------------IYPT-PY---------EDVRLGGMNDLSEAFPDAIIGL--SDHTL 217 (349)
T ss_dssp HHHHTCCEEEEECCC--------------------CSSC-CG---------GGCCTHHHHHHHHHCTTSEEEE--ECCSS
T ss_pred HHHcCCCEEEEeccC--------------------CCCC-Ch---------hhcCHHHHHHHHHHCCCCCEEe--CCCCC
Confidence 477887777531 1122 11 122455677777776 799863 22211
Q ss_pred CHHHHHHHHHcCCCEE
Q 021575 234 TPADAAMMMQLGCDGV 249 (310)
Q Consensus 234 t~~d~~~~l~~GadgV 249 (310)
...-...+..+||+-|
T Consensus 218 G~~~~~AAvAlGA~iI 233 (349)
T 2wqp_A 218 DNYACLGAVALGGSIL 233 (349)
T ss_dssp SSHHHHHHHHHTCCEE
T ss_pred cHHHHHHHHHhCCCEE
Confidence 2344555668999933
No 297
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=93.36 E-value=0.51 Score=41.62 Aligned_cols=40 Identities=25% Similarity=0.393 Sum_probs=33.1
Q ss_pred CCCEEEeCCCCCCCHHHHHHHH-HcCCCEEEEccccccCCCHHHH
Q 021575 221 RLPVVHFAAGGVATPADAAMMM-QLGCDGVFVGSGVFKSGDPVKR 264 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~~d~~~~l-~~GadgV~VGsai~~a~dp~~~ 264 (310)
+++|++ .|+| +++|+.+++ ..+.||++||++-++ +++...
T Consensus 205 ~vrIlY--GGSV-~~~N~~~l~~~~diDG~LVGgAsL~-~~F~~i 245 (250)
T 2j27_A 205 ELRILY--GGSV-NGKNARTLYQQRDVNGFLVGGASLK-PEFVDI 245 (250)
T ss_dssp HCCEEE--ESSC-CTTTHHHHHTSTTCCEEEESGGGGS-TTHHHH
T ss_pred cccEEE--cCCC-CHHHHHHHHcCCCCCeeeeehHHHH-HHHHHH
Confidence 478983 6888 588999999 689999999999999 776543
No 298
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=93.34 E-value=0.26 Score=43.76 Aligned_cols=37 Identities=22% Similarity=0.431 Sum_probs=29.6
Q ss_pred CCCEEEeCCCCCCCHHHHHHHH-HcCCCEEEEccccccCCC
Q 021575 221 RLPVVHFAAGGVATPADAAMMM-QLGCDGVFVGSGVFKSGD 260 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~~d~~~~l-~~GadgV~VGsai~~a~d 260 (310)
+++|+ -+|+| +++++.+++ ..+.||++||++-+++++
T Consensus 212 ~vrIl--YGGSV-~~~N~~~l~~~~diDG~LVGgAsL~a~~ 249 (261)
T 1m6j_A 212 ATRIQ--YGGSV-NPANCNELAKKADIDGFLVGGASLDAAK 249 (261)
T ss_dssp HSCEE--ECSCC-CTTTHHHHHTSTTCCEEEESGGGGSHHH
T ss_pred cccEE--EcCCc-CHhhHHHHhcCCCCCeeEecHHHhChHH
Confidence 47898 46888 588888877 679999999999997433
No 299
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=93.31 E-value=4.6 Score=36.60 Aligned_cols=82 Identities=18% Similarity=0.165 Sum_probs=46.3
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGad 116 (310)
..+..+.+.|+++++.+. . .|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|||
T Consensus 47 ~li~~li~~Gv~Gl~v~G-t------TGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gad 119 (315)
T 3si9_A 47 NFVEWQITQGINGVSPVG-T------TGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGAD 119 (315)
T ss_dssp HHHHHHHHTTCSEEECSS-T------TTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEeCc-c------ccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCC
Confidence 467777899999984441 1 1101112211 2333334433 689999765432 4567888899999
Q ss_pred EEE-eCCC---CCchhHHHHHH
Q 021575 117 YVD-ESEV---LTPADEENHIN 134 (310)
Q Consensus 117 ~Vi-~~~~---~~~~~~~~~i~ 134 (310)
+++ .+.. .+..++.++.+
T Consensus 120 avlv~~P~y~~~~~~~l~~~f~ 141 (315)
T 3si9_A 120 AVLVVTPYYNRPNQRGLYTHFS 141 (315)
T ss_dssp EEEEECCCSSCCCHHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHH
Confidence 996 4432 23445555544
No 300
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=93.28 E-value=0.52 Score=42.63 Aligned_cols=118 Identities=14% Similarity=0.126 Sum_probs=66.8
Q ss_pred HHHHHHHHcCCcEEEeccCC--cccccccCCCCCCCCHHHHHHHHhh----cCcceeeccccC---------cHHHHHHH
Q 021575 46 EQARVAEEAGACAVMALERV--PADIRSQGGVARMSDPQLIKEIKQS----VTIPVMAKARIG---------HFVEAQIL 110 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~--~~~~~~~~G~~~~~~~~~i~~i~~~----~~iPv~vk~~~~---------~~~~a~~~ 110 (310)
+.++.++++|+.++ .|+.+ ++.....+|....+..+.+.+|+.. .+.++.++-|.. ..++++.+
T Consensus 98 ~~v~~l~~aGa~gv-~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~ra~ay 176 (295)
T 1xg4_A 98 RTVKSMIKAGAAGL-HIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAY 176 (295)
T ss_dssp HHHHHHHHHTCSEE-EEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEE-EECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHHHHHHHH
Confidence 56888899999997 77632 2322233344344444666666543 245566654433 13567889
Q ss_pred HHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEe-----cCCHHHHHHHHHhCCCEEEEc
Q 021575 111 EAIGIDYVDESEVLTPADEENHINKHNFRIPFVCG-----CRNLGEALRRIREGAAMIRTK 166 (310)
Q Consensus 111 ~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~-----~~t~~ea~~~~~~Gad~V~v~ 166 (310)
.++|||.|......+..++.+..+.. .+|+++- ....-....+.++|++.|...
T Consensus 177 ~eAGAd~i~~e~~~~~~~~~~i~~~~--~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~ 235 (295)
T 1xg4_A 177 VEAGAEMLFPEAITELAMYRQFADAV--QVPILANITEFGATPLFTTDELRSAHVAMALYP 235 (295)
T ss_dssp HHTTCSEEEETTCCSHHHHHHHHHHH--CSCBEEECCSSSSSCCCCHHHHHHTTCSEEEES
T ss_pred HHcCCCEEEEeCCCCHHHHHHHHHHc--CCCEEEEecccCCCCCCCHHHHHHcCCCEEEEC
Confidence 99999999744432234444444332 3343221 111112455678899998764
No 301
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=93.28 E-value=0.21 Score=43.74 Aligned_cols=74 Identities=16% Similarity=0.198 Sum_probs=56.0
Q ss_pred hhhCcccccCCCHHHHHHHHHcCCc----EEEeccCCcccccccCCCCCCCCHHHHHHHHhhc-CcceeeccccCcHHHH
Q 021575 33 MLRGGVIMDVVTPEQARVAEEAGAC----AVMALERVPADIRSQGGVARMSDPQLIKEIKQSV-TIPVMAKARIGHFVEA 107 (310)
Q Consensus 33 ~~~~g~i~~~~~~~~A~~~~~~Ga~----~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~-~iPv~vk~~~~~~~~a 107 (310)
++.+|... ++++.++++.+.|.+ .++.|+. .| ...+.+.++++++.+ ++|+.+...+...+++
T Consensus 138 rl~~g~~~--~~~e~~~~~a~~g~~~l~~~~Vyl~~--------~G--~~~~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a 205 (234)
T 2f6u_A 138 RVTKALCN--IDKELAASYALVGEKLFNLPIIYIEY--------SG--TYGNPELVAEVKKVLDKARLFYGGGIDSREKA 205 (234)
T ss_dssp HHTTBCCC--CCHHHHHHHHHHHHHTTCCSEEEEEC--------TT--SCCCHHHHHHHHHHCSSSEEEEESCCCSHHHH
T ss_pred EeecCCCC--CCHHHHHHHHHhhhhhcCCCEEEEeC--------CC--CcchHHHHHHHHHhCCCCCEEEEecCCCHHHH
Confidence 44455444 478889999888872 3456631 12 234689999999999 9999999988888899
Q ss_pred HHHHHcCCCEEE
Q 021575 108 QILEAIGIDYVD 119 (310)
Q Consensus 108 ~~~~~aGad~Vi 119 (310)
+.+.+ |||+|+
T Consensus 206 ~~~~~-gAd~VI 216 (234)
T 2f6u_A 206 REMLR-YADTII 216 (234)
T ss_dssp HHHHH-HSSEEE
T ss_pred HHHHh-CCCEEE
Confidence 99888 999996
No 302
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=93.24 E-value=0.86 Score=42.75 Aligned_cols=173 Identities=12% Similarity=0.124 Sum_probs=94.6
Q ss_pred HHHHHHHHcCCcEE-Eec-cCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEE-EeCC
Q 021575 46 EQARVAEEAGACAV-MAL-ERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYV-DESE 122 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i-~~L-~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~V-i~~~ 122 (310)
++|+++.++|++.+ .+. .|-. -...+.|-. ......+.++++..++|++.-.. +...++.+.+. +|.+ +.+.
T Consensus 160 ~~a~~~k~aGa~~vk~q~fkprt-s~~~f~gl~-~egl~~L~~~~~~~Gl~~~te~~--d~~~~~~l~~~-vd~lkIgs~ 234 (385)
T 3nvt_A 160 AVAESIKAKGLKLIRGGAFKPRT-SPYDFQGLG-LEGLKILKRVSDEYGLGVISEIV--TPADIEVALDY-VDVIQIGAR 234 (385)
T ss_dssp HHHHHHHHTTCCEEECBSSCCCS-STTSCCCCT-HHHHHHHHHHHHHHTCEEEEECC--SGGGHHHHTTT-CSEEEECGG
T ss_pred HHHHHHHHcCCCeEEcccccCCC-ChHhhcCCC-HHHHHHHHHHHHHcCCEEEEecC--CHHHHHHHHhh-CCEEEECcc
Confidence 46778888999987 221 1110 001111111 11234566667778999987544 22456666666 8988 5565
Q ss_pred CCCchhHHHHHHhcCCCCcEEEe--c-CCHHHHHHHHH----hCC-CEEEEcCCCCCcchHHHHHHHHhhccceEeeccc
Q 021575 123 VLTPADEENHINKHNFRIPFVCG--C-RNLGEALRRIR----EGA-AMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNM 194 (310)
Q Consensus 123 ~~~~~~~~~~i~~~~~~i~~~v~--~-~t~~ea~~~~~----~Ga-d~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~ 194 (310)
.+...++.+.+.+ .+.+++++ . .|.+|...+++ .|. +++-++-.. + -+++.
T Consensus 235 ~~~n~~LL~~~a~--~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~-s------------------~yp~~ 293 (385)
T 3nvt_A 235 NMQNFELLKAAGR--VDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGI-R------------------TYEKA 293 (385)
T ss_dssp GTTCHHHHHHHHT--SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCB-C------------------CSCCS
T ss_pred cccCHHHHHHHHc--cCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCC-C------------------CCCCC
Confidence 6667777776654 56677766 3 67788777654 365 455555211 0 11111
Q ss_pred ChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCC--CCCCCH--HHHHHHHHcCCCEEEEcc
Q 021575 195 DDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAA--GGVATP--ADAAMMMQLGCDGVFVGS 253 (310)
Q Consensus 195 ~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~--GGI~t~--~d~~~~l~~GadgV~VGs 253 (310)
.+ ...++..+..+++..++||+.-.+ +|-+.. .-...+..+||||+++=.
T Consensus 294 ~~---------~~ldl~~i~~lk~~~~lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~ 347 (385)
T 3nvt_A 294 TR---------NTLDISAVPILKKETHLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEV 347 (385)
T ss_dssp SS---------SBCCTTHHHHHHHHBSSCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEB
T ss_pred Cc---------cccCHHHHHHHHHhcCCCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEe
Confidence 10 112344456666656889963211 221111 124456689999999865
No 303
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=93.23 E-value=1 Score=41.12 Aligned_cols=117 Identities=17% Similarity=0.135 Sum_probs=70.5
Q ss_pred cCcceeecc--ccCcHHHHHHHHHcCCCEEEeCCCCCchhHHHHHHh-c-CCCCcEEEec----CCH-HHHHHHHHhCCC
Q 021575 91 VTIPVMAKA--RIGHFVEAQILEAIGIDYVDESEVLTPADEENHINK-H-NFRIPFVCGC----RNL-GEALRRIREGAA 161 (310)
Q Consensus 91 ~~iPv~vk~--~~~~~~~a~~~~~aGad~Vi~~~~~~~~~~~~~i~~-~-~~~i~~~v~~----~t~-~ea~~~~~~Gad 161 (310)
...|++..- .+...+.+..+.++|+-+++.....++..+.+.+++ . ..+.++.+.. .+. +.+..+.+.|+|
T Consensus 11 ~~~Pii~apM~g~s~~~la~av~~aG~lG~i~~~~~~~~~~~~~i~~i~~~~~~p~gvnl~~~~~~~~~~~~~a~~~g~d 90 (332)
T 2z6i_A 11 IDYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSLTDKPFGVNIMLLSPFVEDIVDLVIEEGVK 90 (332)
T ss_dssp CSSSEEECCCTTTCCHHHHHHHHHHTSBEEEECTTCCHHHHHHHHHHHHHHCCSCEEEEECTTSTTHHHHHHHHHHTTCS
T ss_pred CCCCEEeCCCCCCCcHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcCCCEEEEecCCCCCHHHHHHHHHHCCCC
Confidence 467876532 223457778888889866664444555555444433 1 1233333432 222 345667789999
Q ss_pred EEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHH
Q 021575 162 MIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMM 241 (310)
Q Consensus 162 ~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~ 241 (310)
+|.+++.. |.+.++.+++ .++|++. .+.+.+++..+
T Consensus 91 ~V~~~~g~---------------------------------------p~~~i~~l~~-~g~~v~~----~v~~~~~a~~~ 126 (332)
T 2z6i_A 91 VVTTGAGN---------------------------------------PSKYMERFHE-AGIIVIP----VVPSVALAKRM 126 (332)
T ss_dssp EEEECSSC---------------------------------------GGGTHHHHHH-TTCEEEE----EESSHHHHHHH
T ss_pred EEEECCCC---------------------------------------hHHHHHHHHH-cCCeEEE----EeCCHHHHHHH
Confidence 99887521 1123444544 3577763 46788888888
Q ss_pred HHcCCCEEEE
Q 021575 242 MQLGCDGVFV 251 (310)
Q Consensus 242 l~~GadgV~V 251 (310)
.+.|+|++.+
T Consensus 127 ~~~GaD~i~v 136 (332)
T 2z6i_A 127 EKIGADAVIA 136 (332)
T ss_dssp HHTTCSCEEE
T ss_pred HHcCCCEEEE
Confidence 8999999998
No 304
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=93.03 E-value=2 Score=39.91 Aligned_cols=46 Identities=15% Similarity=0.187 Sum_probs=36.6
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccc
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVF 256 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~ 256 (310)
+++..+++++.+++||+ +.+.+.+++++.++++.| +|.|++--.-+
T Consensus 229 ~~~~~~~l~~~~~iPI~--~de~i~~~~~~~~~i~~~~~d~v~ik~~~~ 275 (384)
T 2pgw_A 229 SIPAMAHVREKVGIPIV--ADQAAFTLYDVYEICRQRAADMICIGPREI 275 (384)
T ss_dssp CHHHHHHHHHHCSSCEE--ESTTCCSHHHHHHHHHTTCCSEEEECHHHH
T ss_pred hHHHHHHHHhhCCCCEE--EeCCcCCHHHHHHHHHcCCCCEEEEcchhh
Confidence 35667778777789998 678899999999999765 89998865544
No 305
>3gdm_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, K93R mutant, lyase, phosphoprotein; 1.60A {Saccharomyces cerevisiae} SCOP: c.1.2.3 PDB: 3gdl_A* 3gdk_A* 3gdt_A* 3gdr_A* 1dqw_A 1dqx_A*
Probab=92.98 E-value=0.11 Score=46.52 Aligned_cols=35 Identities=23% Similarity=0.352 Sum_probs=29.8
Q ss_pred HHHHHHcCCCEEEEcccccc-CCCHHHHHHHHHHHH
Q 021575 238 AAMMMQLGCDGVFVGSGVFK-SGDPVKRAQAIVRAV 272 (310)
Q Consensus 238 ~~~~l~~GadgV~VGsai~~-a~dp~~~a~~l~~~i 272 (310)
-.++++.|+|.++|||.|++ ++||...+++++++-
T Consensus 220 P~~Ai~~GaD~iVVGRpI~~~a~dP~~aa~~i~~~~ 255 (267)
T 3gdm_A 220 VDDVVSTGSDIIIVGRGLFAKGRDAKVEGERYRKAG 255 (267)
T ss_dssp HHHHHHTTCSEEEECGGGTSTTCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEChhhccCCCCHHHHHHHHHHHH
Confidence 33446899999999999999 999999999886654
No 306
>3g3d_A UMP synthase, uridine 5'-monophosphate synthase; C-terminal domain, orotidine 5'-monophosphate decarboxylase, human, 5-fluoro-6-azido-UMP; HET: 5FU; 1.70A {Homo sapiens} PDB: 3bvj_A* 3mw7_A* 4hib_A* 4hkp_A* 2p1f_A 2eaw_A 3bgg_A* 3bgj_A*
Probab=92.97 E-value=0.057 Score=49.28 Aligned_cols=35 Identities=23% Similarity=0.447 Sum_probs=29.7
Q ss_pred HHHHH-HcCCCEEEEccccccCCCHHHHHHHHHHHH
Q 021575 238 AAMMM-QLGCDGVFVGSGVFKSGDPVKRAQAIVRAV 272 (310)
Q Consensus 238 ~~~~l-~~GadgV~VGsai~~a~dp~~~a~~l~~~i 272 (310)
-.+++ +.|+|.++|||.|++++||...+++++++-
T Consensus 267 P~~Ai~~~GaD~iVVGRpIt~A~dP~~aa~~i~~~~ 302 (312)
T 3g3d_A 267 PQEVIGKRGSDIIIVGRGIISAADRLEAAEMYRKAA 302 (312)
T ss_dssp HHHHHHTTCCSEEEESHHHHTSSSHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEEChhhcCCCCHHHHHHHHHHHH
Confidence 34457 799999999999999999999998886643
No 307
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=92.87 E-value=5 Score=35.82 Aligned_cols=82 Identities=18% Similarity=0.193 Sum_probs=46.4
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGad 116 (310)
..+..+.+.|+++++.+. . .|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|+|
T Consensus 25 ~lv~~li~~Gv~gl~~~G-t------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gad 97 (292)
T 2vc6_A 25 DLVEWQIEEGSFGLVPCG-T------TGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGAD 97 (292)
T ss_dssp HHHHHHHHTTCSEEETTS-G------GGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEECc-c------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCC
Confidence 567778899999984431 1 1101012111 2333334433 589998765432 3567788889999
Q ss_pred EEE-eCCC---CCchhHHHHHH
Q 021575 117 YVD-ESEV---LTPADEENHIN 134 (310)
Q Consensus 117 ~Vi-~~~~---~~~~~~~~~i~ 134 (310)
+++ .+.. .+..++.++.+
T Consensus 98 avlv~~P~y~~~s~~~l~~~f~ 119 (292)
T 2vc6_A 98 GVLIVSPYYNKPTQEGIYQHFK 119 (292)
T ss_dssp EEEEECCCSSCCCHHHHHHHHH
T ss_pred EEEEcCCCCCCCCHHHHHHHHH
Confidence 996 4432 24455555543
No 308
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=92.87 E-value=0.2 Score=48.91 Aligned_cols=81 Identities=23% Similarity=0.190 Sum_probs=53.8
Q ss_pred cccCCCHHHHHHHHHcCCcEE-Eecc---CCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcC
Q 021575 39 IMDVVTPEQARVAEEAGACAV-MALE---RVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIG 114 (310)
Q Consensus 39 i~~~~~~~~A~~~~~~Ga~~i-~~L~---~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aG 114 (310)
..++.+++.++.+.++|||++ +.+. .|.+.+-..-|.-.......+.+.++.+++||+....+.+.-++-.++.+|
T Consensus 327 aGNVaT~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~KAlaaG 406 (556)
T 4af0_A 327 AGNVVTREQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKALALG 406 (556)
T ss_dssp EEEECSHHHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTT
T ss_pred eccccCHHHHHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCEEecCCcCcchHHHHHhhcC
Confidence 345678899999999999998 4553 233322222222111111234445666899999988877667788899999
Q ss_pred CCEEE
Q 021575 115 IDYVD 119 (310)
Q Consensus 115 ad~Vi 119 (310)
||.|-
T Consensus 407 Ad~VM 411 (556)
T 4af0_A 407 ASAVM 411 (556)
T ss_dssp CSEEE
T ss_pred CCEEE
Confidence 99994
No 309
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=92.83 E-value=0.63 Score=42.12 Aligned_cols=119 Identities=16% Similarity=0.092 Sum_probs=67.6
Q ss_pred HHHHHHHHcCCcEEEeccCCccccccc--CCCCCCCCHHHHHHHHhh----cCcceeeccccCc---------HHHHHHH
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQ--GGVARMSDPQLIKEIKQS----VTIPVMAKARIGH---------FVEAQIL 110 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~--~G~~~~~~~~~i~~i~~~----~~iPv~vk~~~~~---------~~~a~~~ 110 (310)
+.++.++++|+.++ .|+.+....+.. +|.......+.+.+|+.+ .+.++.+.-|... .+.++.+
T Consensus 102 ~~v~~l~~aGaagv-~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~Ra~ay 180 (298)
T 3eoo_A 102 RTIRSFIKAGVGAV-HLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAIERAIAY 180 (298)
T ss_dssp HHHHHHHHTTCSEE-EEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCeEE-EECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHHHHHHhh
Confidence 45788899999997 776332211221 222233334567777533 2456666544431 3667888
Q ss_pred HHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEec----CCH-HHHHHHHHhCCCEEEEcC
Q 021575 111 EAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGC----RNL-GEALRRIREGAAMIRTKG 167 (310)
Q Consensus 111 ~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~----~t~-~ea~~~~~~Gad~V~v~g 167 (310)
.++|||.|......++.++.+..+... .++.+-. .++ -....+.++|+..|...+
T Consensus 181 ~~AGAD~if~~~~~~~ee~~~~~~~~~--~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~ 240 (298)
T 3eoo_A 181 VEAGADMIFPEAMKTLDDYRRFKEAVK--VPILANLTEFGSTPLFTLDELKGANVDIALYCC 240 (298)
T ss_dssp HHTTCSEEEECCCCSHHHHHHHHHHHC--SCBEEECCTTSSSCCCCHHHHHHTTCCEEEECS
T ss_pred HhcCCCEEEeCCCCCHHHHHHHHHHcC--CCeEEEeccCCCCCCCCHHHHHHcCCeEEEEch
Confidence 999999997544445666666655532 3332211 110 124456688999987643
No 310
>2fds_A Orotidine-monophosphate-decarboxylase; TIM barrel, structural genomics, structural genomics consortium, SGC, unknown function; 1.72A {Plasmodium berghei} SCOP: c.1.2.3 PDB: 2aqw_A
Probab=92.83 E-value=2.2 Score=39.43 Aligned_cols=33 Identities=18% Similarity=0.206 Sum_probs=29.4
Q ss_pred HcCCCEEEEccccccCCCHHHHHHHHHHHHhcc
Q 021575 243 QLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHY 275 (310)
Q Consensus 243 ~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~ 275 (310)
..|+|.++|||+|++++||...++++.+.++.+
T Consensus 305 ~~gadiIvVGR~I~~A~dp~~Aa~~i~~ei~~~ 337 (352)
T 2fds_A 305 DYEKLLINVGRAITKSPNPKKSSESYYNQIIQI 337 (352)
T ss_dssp SGGGEEEEECHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred hcCceEEEECHHHccCCCHHHHHHHHHHHHHHH
Confidence 468999999999999999999999999888743
No 311
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=92.75 E-value=5.3 Score=35.90 Aligned_cols=92 Identities=15% Similarity=0.156 Sum_probs=51.0
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGad 116 (310)
..+..+.+.|+++++.+. . .|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|||
T Consensus 40 ~lv~~li~~Gv~gi~v~G-t------tGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 112 (304)
T 3l21_A 40 RLANHLVDQGCDGLVVSG-T------TGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAH 112 (304)
T ss_dssp HHHHHHHHTTCSEEEESS-T------TTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEeCc-c------ccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCC
Confidence 467778899999985441 1 1100012211 2333334443 689998764332 4667888899999
Q ss_pred EEE-eCCC---CCchhHHHHHHh--cCCCCcEEE
Q 021575 117 YVD-ESEV---LTPADEENHINK--HNFRIPFVC 144 (310)
Q Consensus 117 ~Vi-~~~~---~~~~~~~~~i~~--~~~~i~~~v 144 (310)
+++ .+.. .+..++.++++. ...++++++
T Consensus 113 avlv~~P~y~~~s~~~l~~~f~~va~a~~lPiil 146 (304)
T 3l21_A 113 GLLVVTPYYSKPPQRGLQAHFTAVADATELPMLL 146 (304)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHTSCSSCEEE
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 996 4332 245566655544 223455443
No 312
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=92.72 E-value=5.3 Score=35.77 Aligned_cols=82 Identities=21% Similarity=0.261 Sum_probs=46.1
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGad 116 (310)
..+..+.+.|+++++.+. . .|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|||
T Consensus 32 ~lv~~li~~Gv~gl~~~G-t------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 104 (297)
T 3flu_A 32 DLIDWHIENGTDGIVAVG-T------TGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGAD 104 (297)
T ss_dssp HHHHHHHHTTCCEEEESS-T------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEeCc-c------ccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCC
Confidence 467777899999985441 1 1100012211 2333334433 589999765332 4567888899999
Q ss_pred EEE-eCCC---CCchhHHHHHH
Q 021575 117 YVD-ESEV---LTPADEENHIN 134 (310)
Q Consensus 117 ~Vi-~~~~---~~~~~~~~~i~ 134 (310)
+++ .+.. .+..++.++.+
T Consensus 105 avlv~~P~y~~~~~~~l~~~f~ 126 (297)
T 3flu_A 105 YTLSVVPYYNKPSQEGIYQHFK 126 (297)
T ss_dssp EEEEECCCSSCCCHHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHH
Confidence 995 4432 23445555543
No 313
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=92.72 E-value=4.5 Score=34.98 Aligned_cols=171 Identities=9% Similarity=0.046 Sum_probs=87.1
Q ss_pred HHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEEeCCC-CCchhHHHHHHh--cCCCCc-EEEecCCHHHHHH--
Q 021575 81 PQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEV-LTPADEENHINK--HNFRIP-FVCGCRNLGEALR-- 154 (310)
Q Consensus 81 ~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi~~~~-~~~~~~~~~i~~--~~~~i~-~~v~~~t~~ea~~-- 154 (310)
.+.++++++. ++|+++-......+....+.++||+..+.-.. .+.......+.. ....+. .+++- +......
T Consensus 64 ~~~~~~lr~~-~~pvi~lt~~~~~~~~~~a~~~Ga~dyl~Kp~~~~~~~~~~~~~~~~~~~~~~ILivDD-~~~~~~~l~ 141 (259)
T 3luf_A 64 GEAVKVLLER-GLPVVILTADISEDKREAWLEAGVLDYVMKDSRHSLQYAVGLVHRLYLNQQIEVLVVDD-SRTSRHRTM 141 (259)
T ss_dssp SHHHHHHHHT-TCCEEEEECC-CHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHTTCEEEEECS-CHHHHHHHH
T ss_pred HHHHHHHHhC-CCCEEEEEccCCHHHHHHHHHCCCcEEEeCCchhHHHHHHHhhhhHhhcCCCcEEEEeC-CHHHHHHHH
Confidence 4678888764 78988765545556777889999998863331 111112222211 011222 23332 2211111
Q ss_pred -HH-HhCCCEEEEcCCCCCcchHHHHHHHHhhc-cceEeecccChhHHHHhhhccCCcHHHHHHHhhc---CCCCEEEeC
Q 021575 155 -RI-REGAAMIRTKGEAGTGNIIEAVRHVRSVM-GDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL---GRLPVVHFA 228 (310)
Q Consensus 155 -~~-~~Gad~V~v~g~~~~~~~~~~~~~~r~~~-~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~---~~iPVi~iA 228 (310)
.. ..|....... +..++++..++.. .++-++ ...- .....+++++++++. .++||+.+
T Consensus 142 ~~L~~~~~~v~~a~------~~~eal~~l~~~~~~dlvll-D~~m--------P~~dG~~l~~~lr~~~~~~~~~ii~~- 205 (259)
T 3luf_A 142 AQLRKQLLQVHEAS------HAREALATLEQHPAIRLVLV-DYYM--------PEIDGISLVRMLRERYSKQQLAIIGI- 205 (259)
T ss_dssp HHHHTTTCEEEEES------SHHHHHHHHHHCTTEEEEEE-CSCC--------SSSCHHHHHHHHHHHCCTTTSEEEEE-
T ss_pred HHHHHcCcEEEEeC------CHHHHHHHHhcCCCCCEEEE-cCCC--------CCCCHHHHHHHHHhccCCCCCeEEEE-
Confidence 11 2233322221 1134555444321 111111 1110 012237788888764 35788854
Q ss_pred CCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhcc
Q 021575 229 AGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHY 275 (310)
Q Consensus 229 ~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~ 275 (310)
.+-.+.+...+++++||++.+ .|.-++......+.+.++..
T Consensus 206 -s~~~~~~~~~~a~~~Ga~~yl-----~KP~~~~~L~~~i~~~l~~~ 246 (259)
T 3luf_A 206 -SVSDKRGLSARYLKQGANDFL-----NQPFEPEELQCRVSHNLEAL 246 (259)
T ss_dssp -ECSSSSSHHHHHHHTTCSEEE-----ESSCCHHHHHHHHHHHHHHH
T ss_pred -EccCCHHHHHHHHhcChhheE-----cCCCCHHHHHHHHHHHHHhH
Confidence 444567888889999999985 66556766666666555543
No 314
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=92.63 E-value=0.74 Score=44.63 Aligned_cols=112 Identities=20% Similarity=0.131 Sum_probs=72.7
Q ss_pred HHHHHHHHHcCCcEE-EeccCCcccccccCCCCCCCCHHHHHHHHhhc-C-cceeeccccCcHHHHHHHHHcCCCEEE-e
Q 021575 45 PEQARVAEEAGACAV-MALERVPADIRSQGGVARMSDPQLIKEIKQSV-T-IPVMAKARIGHFVEAQILEAIGIDYVD-E 120 (310)
Q Consensus 45 ~~~A~~~~~~Ga~~i-~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~-~-iPv~vk~~~~~~~~a~~~~~aGad~Vi-~ 120 (310)
.+.++.+.+.|++.+ ++.+ .|.. ....+.++.+++.+ + +|++++... ..+.++.+.++|+|++. +
T Consensus 244 ~e~~~~l~e~gv~~l~Vd~~---------~g~~-~~~~~~i~~lk~~~~~~~~Vi~G~V~-t~~~a~~l~~aGad~I~Vg 312 (503)
T 1me8_A 244 RERVPALVEAGADVLCIDSS---------DGFS-EWQKITIGWIREKYGDKVKVGAGNIV-DGEGFRYLADAGADFIKIG 312 (503)
T ss_dssp HHHHHHHHHHTCSEEEECCS---------CCCS-HHHHHHHHHHHHHHGGGSCEEEEEEC-SHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhhhccceEEecc---------cCcc-cchhhHHHHHHHhCCCCceEeecccc-CHHHHHHHHHhCCCeEEec
Confidence 366888888899976 2332 1110 01246677777776 5 898876543 34788999999999995 1
Q ss_pred CCC-------------CCch----hHHHHHH----hcCCCCcEEE--ecCCHHHHHHHHHhCCCEEEEcC
Q 021575 121 SEV-------------LTPA----DEENHIN----KHNFRIPFVC--GCRNLGEALRRIREGAAMIRTKG 167 (310)
Q Consensus 121 ~~~-------------~~~~----~~~~~i~----~~~~~i~~~v--~~~t~~ea~~~~~~Gad~V~v~g 167 (310)
... .+.. ++.+.+. +++.++++++ ++.+..++.++..+||+.|.+..
T Consensus 313 ~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlalGA~~V~iG~ 382 (503)
T 1me8_A 313 IGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAMGADFIMLGR 382 (503)
T ss_dssp SSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHTTCSEEEESH
T ss_pred ccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHcCCCEEEECc
Confidence 111 1111 2222222 1222688888 69999999999999999998753
No 315
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=92.56 E-value=5.5 Score=35.56 Aligned_cols=82 Identities=15% Similarity=0.189 Sum_probs=46.2
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGad 116 (310)
..+..+.+.|+++++.+. . .|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|||
T Consensus 27 ~lv~~li~~Gv~gl~v~G-t------tGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 99 (292)
T 3daq_A 27 AHVNFLLENNAQAIIVNG-T------TAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGAD 99 (292)
T ss_dssp HHHHHHHHTTCCEEEESS-G------GGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEECc-c------ccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCC
Confidence 467778899999985441 1 1100012111 2333344443 689999765332 4567788889999
Q ss_pred EEE-eCCC---CCchhHHHHHH
Q 021575 117 YVD-ESEV---LTPADEENHIN 134 (310)
Q Consensus 117 ~Vi-~~~~---~~~~~~~~~i~ 134 (310)
+++ .+.. .+..++.++.+
T Consensus 100 avlv~~P~y~~~~~~~l~~~f~ 121 (292)
T 3daq_A 100 AIMLITPYYNKTNQRGLVKHFE 121 (292)
T ss_dssp EEEEECCCSSCCCHHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHH
Confidence 996 4332 23445555543
No 316
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=92.48 E-value=5.7 Score=35.59 Aligned_cols=83 Identities=18% Similarity=0.137 Sum_probs=46.7
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc---CcceeeccccCc----HHHHHHHHHcCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV---TIPVMAKARIGH----FVEAQILEAIGI 115 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~---~iPv~vk~~~~~----~~~a~~~~~aGa 115 (310)
..++.+.+.|+++++.+. . .|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|+
T Consensus 32 ~lv~~li~~Gv~gl~v~G-t------tGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Ga 104 (301)
T 3m5v_A 32 RLIKRQIENGIDAVVPVG-T------TGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGA 104 (301)
T ss_dssp HHHHHHHHTTCCEEECSS-T------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEECc-c------ccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCC
Confidence 467778899999984431 1 1100012111 2333334433 589998765332 466788889999
Q ss_pred CEEE-eCCC---CCchhHHHHHHh
Q 021575 116 DYVD-ESEV---LTPADEENHINK 135 (310)
Q Consensus 116 d~Vi-~~~~---~~~~~~~~~i~~ 135 (310)
|+++ .+.. .+..++.++.+.
T Consensus 105 davlv~~P~y~~~s~~~l~~~f~~ 128 (301)
T 3m5v_A 105 DGILSVAPYYNKPTQQGLYEHYKA 128 (301)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHH
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHH
Confidence 9996 4332 234455555543
No 317
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=92.47 E-value=2.7 Score=37.06 Aligned_cols=87 Identities=11% Similarity=0.270 Sum_probs=59.9
Q ss_pred CcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhc-cCC-------hh
Q 021575 208 APYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTH-YSD-------PE 279 (310)
Q Consensus 208 ~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~-~~~-------~~ 279 (310)
...+.+..+++.+++||+. =.. |-++-++.++..+|||+|++--+++. + ...++|.+..++ +++ ++
T Consensus 91 Gs~~~L~~vr~~v~lPvLr-KDF-iid~yQI~eAr~~GADaILLI~a~L~---~-~~l~~l~~~A~~lGl~~LvEVh~~~ 164 (258)
T 4a29_A 91 GSYETLRKIASSVSIPILM-SDF-IVKESQIDDAYNLGADTVLLIVKILT---E-RELESLLEYARSYGMEPLILINDEN 164 (258)
T ss_dssp CCHHHHHHHHTTCSSCEEE-ESC-CCSHHHHHHHHHHTCSEEEEEGGGSC---H-HHHHHHHHHHHHTTCCCEEEESSHH
T ss_pred CCHHHHHHHHHhcCCCEee-ccc-cccHHHHHHHHHcCCCeeehHHhhcC---H-HHHHHHHHHHHHHhHHHHHhcchHH
Confidence 3466778888889999987 133 44899999999999999998877774 3 334445554443 222 23
Q ss_pred hhhhhhhhcccchhcccCccch
Q 021575 280 VLAEVSCGLGEAMVGLNLSDHK 301 (310)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~ 301 (310)
.+ +....+|..+.|+|-++++
T Consensus 165 El-~rAl~~~a~iIGINNRnL~ 185 (258)
T 4a29_A 165 DL-DIALRIGARFIGIMSRDFE 185 (258)
T ss_dssp HH-HHHHHTTCSEEEECSBCTT
T ss_pred HH-HHHhcCCCcEEEEeCCCcc
Confidence 22 2334578999999988764
No 318
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=92.32 E-value=0.74 Score=41.73 Aligned_cols=120 Identities=13% Similarity=0.087 Sum_probs=67.2
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccc--cCCCCCCCCHHHHHHHHhh------cCcceeeccccCc---------HHHHH
Q 021575 46 EQARVAEEAGACAVMALERVPADIRS--QGGVARMSDPQLIKEIKQS------VTIPVMAKARIGH---------FVEAQ 108 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~--~~G~~~~~~~~~i~~i~~~------~~iPv~vk~~~~~---------~~~a~ 108 (310)
+.++.++++|+.++ .|+.+....+. ..|.......+.+.+|+.. .+.++++.-|... .+.++
T Consensus 99 ~tv~~l~~aGaagv-~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ 177 (302)
T 3fa4_A 99 RTTEQYSRSGVAAF-HIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEESVARLR 177 (302)
T ss_dssp HHHHHHHHTTCCEE-EECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHHHHHHHHH
T ss_pred HHHHHHHHcCCcEE-EECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHHHHHHHHH
Confidence 46788899999997 77643221121 1232233334566666433 2556666544431 35678
Q ss_pred HHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEec----CCH-HHHHHHHHhCCCEEEEcC
Q 021575 109 ILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGC----RNL-GEALRRIREGAAMIRTKG 167 (310)
Q Consensus 109 ~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~----~t~-~ea~~~~~~Gad~V~v~g 167 (310)
.+.++|||.+......++.++.+..+... +.++.+-. .++ -....+.++|+..|...+
T Consensus 178 ay~eAGAD~ifi~g~~~~~ei~~~~~~~~-~~Pl~~n~~~~g~~p~~~~~eL~~lGv~~v~~~~ 240 (302)
T 3fa4_A 178 AARDAGADVGFLEGITSREMARQVIQDLA-GWPLLLNMVEHGATPSISAAEAKEMGFRIIIFPF 240 (302)
T ss_dssp HHHTTTCSEEEETTCCCHHHHHHHHHHTT-TSCEEEECCTTSSSCCCCHHHHHHHTCSEEEETT
T ss_pred HHHHcCCCEEeecCCCCHHHHHHHHHHhc-CCceeEEEecCCCCCCCCHHHHHHcCCCEEEEch
Confidence 88999999997655555666666665432 23332211 110 124456678998886543
No 319
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=92.03 E-value=3 Score=36.83 Aligned_cols=34 Identities=21% Similarity=0.422 Sum_probs=29.3
Q ss_pred CCCEEEeCCCCCCCHHHHHHHHHc-CCCEEEEcccccc
Q 021575 221 RLPVVHFAAGGVATPADAAMMMQL-GCDGVFVGSGVFK 257 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~~d~~~~l~~-GadgV~VGsai~~ 257 (310)
+++|++ .|+| +++|+.+++.. +.||++||++-++
T Consensus 208 ~vrIlY--GGSV-~~~N~~~l~~~~diDG~LVGgAsL~ 242 (257)
T 2yc6_A 208 HIRIIY--GGSA-NGSNNEKLGQCPNIDGFLVGGASLK 242 (257)
T ss_dssp TCEEEE--ESSC-CTTTHHHHHTSTTCCEEEESGGGGS
T ss_pred cceEEE--cCcc-CHHHHHHHHcCCCCCeeeecHHHHH
Confidence 588883 6888 68899999965 9999999999997
No 320
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=92.01 E-value=0.73 Score=41.87 Aligned_cols=119 Identities=11% Similarity=0.047 Sum_probs=64.6
Q ss_pred HHHHHHHHcCCcEEEeccCCccccccc--CCCCCCCCHHHHHHHHhh------cCcceeeccccCc---------HHHHH
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQ--GGVARMSDPQLIKEIKQS------VTIPVMAKARIGH---------FVEAQ 108 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~--~G~~~~~~~~~i~~i~~~------~~iPv~vk~~~~~---------~~~a~ 108 (310)
+.++.++++|+.++ .|+.+....+.. +|.......+.+.+|+.+ .+.++.+.-|... .+.++
T Consensus 107 ~~v~~l~~aGaagv-~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ 185 (307)
T 3lye_A 107 RTVEHYIRSGVAGA-HLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLGYEECIERLR 185 (307)
T ss_dssp HHHHHHHHTTCCEE-EECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHCHHHHHHHHH
T ss_pred HHHHHHHHcCCeEE-EEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccCHHHHHHHHH
Confidence 46788899999997 776332211211 222233333556666432 2556666544421 35678
Q ss_pred HHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEE---Ee-cCCH-HHHHHHHHhCCCEEEEc
Q 021575 109 ILEAIGIDYVDESEVLTPADEENHINKHNFRIPFV---CG-CRNL-GEALRRIREGAAMIRTK 166 (310)
Q Consensus 109 ~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~---v~-~~t~-~ea~~~~~~Gad~V~v~ 166 (310)
.+.++|||.+......++.++.+..+... ++++. +. -.++ -....+.++|+..|...
T Consensus 186 ay~eAGAD~ifi~~~~~~~~~~~i~~~~~-~~Pv~~n~~~~g~~p~~t~~eL~~lGv~~v~~~ 247 (307)
T 3lye_A 186 AARDEGADVGLLEGFRSKEQAAAAVAALA-PWPLLLNSVENGHSPLITVEEAKAMGFRIMIFS 247 (307)
T ss_dssp HHHHTTCSEEEECCCSCHHHHHHHHHHHT-TSCBEEEEETTSSSCCCCHHHHHHHTCSEEEEE
T ss_pred HHHHCCCCEEEecCCCCHHHHHHHHHHcc-CCceeEEeecCCCCCCCCHHHHHHcCCeEEEEC
Confidence 88999999997554445566666655432 23332 21 1111 12345667899888543
No 321
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=91.99 E-value=6.3 Score=35.31 Aligned_cols=82 Identities=20% Similarity=0.259 Sum_probs=45.5
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGad 116 (310)
..+..+.+.|+++++.+. . .|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|||
T Consensus 29 ~lv~~li~~Gv~gl~v~G-t------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 101 (300)
T 3eb2_A 29 RLCDDLIQAGVHGLTPLG-S------TGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGAD 101 (300)
T ss_dssp HHHHHHHHTTCSCBBTTS-G------GGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEECc-c------ccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCC
Confidence 467778899999973331 1 1100012211 2333334433 589998754322 4567788899999
Q ss_pred EEE-eCCC---CCchhHHHHHH
Q 021575 117 YVD-ESEV---LTPADEENHIN 134 (310)
Q Consensus 117 ~Vi-~~~~---~~~~~~~~~i~ 134 (310)
+++ .+.. .+..++.++.+
T Consensus 102 avlv~~P~y~~~~~~~l~~~f~ 123 (300)
T 3eb2_A 102 GILAILEAYFPLKDAQIESYFR 123 (300)
T ss_dssp EEEEEECCSSCCCHHHHHHHHH
T ss_pred EEEEcCCCCCCCCHHHHHHHHH
Confidence 996 3332 23445555543
No 322
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=91.98 E-value=6.8 Score=35.38 Aligned_cols=182 Identities=13% Similarity=0.054 Sum_probs=107.2
Q ss_pred ccCCCHHH----HHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccC-cHHHHHHHHHc-
Q 021575 40 MDVVTPEQ----ARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIG-HFVEAQILEAI- 113 (310)
Q Consensus 40 ~~~~~~~~----A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~-~~~~a~~~~~a- 113 (310)
.++.+.+. .+++++.+..-|+++.+. ..+ +.|. .....+..+.+.+++||.+..--+ ..+.+..+.++
T Consensus 32 fNv~n~e~~~Avl~AAee~~sPvIlq~s~g--~~~-y~g~---~~~~~~~~~A~~~~VPVaLHlDHg~~~e~i~~ai~~~ 105 (306)
T 3pm6_A 32 ICVYNLEGILAIIRAAEHKRSPAMILLFPW--AIQ-YADS---LLVRTAASACRAASVPITLHLDHAQDPEIIKRAADLS 105 (306)
T ss_dssp EECSSHHHHHHHHHHHHHTTCCEEEEECHH--HHH-HHTT---HHHHHHHHHHHHCSSCEEEEEEEECCHHHHHHHHHTC
T ss_pred EeeCCHHHHHHHHHHHHHhCCCEEEEcChh--HHh-hccH---HHHHHHHHHHHHCCCCEEEEcCCCCCHHHHHHHHHhh
Confidence 34555554 445577888876666311 111 1111 113455566667899999864322 46778888898
Q ss_pred -------CCCEEE--eCCCCCch-------hHHHHHHhcCC----CCcEE--------------EecCCHHHHHHHHHhC
Q 021575 114 -------GIDYVD--ESEVLTPA-------DEENHINKHNF----RIPFV--------------CGCRNLGEALRRIREG 159 (310)
Q Consensus 114 -------Gad~Vi--~~~~~~~~-------~~~~~i~~~~~----~i~~~--------------v~~~t~~ea~~~~~~G 159 (310)
|.+-|- .+. ++.+ ++.++....+. .+-.+ .-.++++|+.+..+.|
T Consensus 106 ~~~~~~~GFtSVMiDgS~-~p~eENi~~Tk~vv~~ah~~gvsVEaElG~igG~Edgv~~~~~~~~~yT~Peea~~Fv~Tg 184 (306)
T 3pm6_A 106 RSETHEPGFDSIMVDMSH-FSKEENLRLTRELVAYCNARGIATEAEPGRIEGGEDGVQDTVDLEGVLTTPEESEEFVATG 184 (306)
T ss_dssp ------CCCSEEEECCTT-SCHHHHHHHHHHHHHHHHTTTCEEEECSSBCCCCBTTBCCCTTCCCBCCCHHHHHHHHTTT
T ss_pred hhccCCCCCCEEEEeCCC-CCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCccccccccccCCCHHHHHHHHHcC
Confidence 999983 332 2222 33333332221 01000 0136789998877889
Q ss_pred CCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcC--CCCEEEeCCCCCCCHHH
Q 021575 160 AAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG--RLPVVHFAAGGVATPAD 237 (310)
Q Consensus 160 ad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~--~iPVi~iA~GGI~t~~d 237 (310)
+|.+.+.-. +-+ ..++. ....-+++.++++.+.+ ++|++.=.+.|+ ..++
T Consensus 185 vD~LAvaiG--t~H---------------G~Yk~----------~~p~Ld~~~L~~I~~~v~~~vpLVlHGgSG~-p~e~ 236 (306)
T 3pm6_A 185 INWLAPAFG--NVH---------------GNYGP----------RGVQLDYERLQRINEAVGERVGLVLHGADPF-TKEI 236 (306)
T ss_dssp CSEECCCSS--CCS---------------SCCCT----------TCCCCCHHHHHHHHHHHTTTSEEEECSCTTC-CHHH
T ss_pred CCEEEEEcC--ccc---------------cCcCC----------CCCccCHHHHHHHHHHhCCCCCEEeeCCCCC-CHHH
Confidence 998875421 111 00100 01233578888888765 699885455676 5788
Q ss_pred HHHHHHcCCCEEEEccccc
Q 021575 238 AAMMMQLGCDGVFVGSGVF 256 (310)
Q Consensus 238 ~~~~l~~GadgV~VGsai~ 256 (310)
+.+++..|..=|=|++.+.
T Consensus 237 i~~ai~~GV~KiNi~Tdl~ 255 (306)
T 3pm6_A 237 FEKCIERGVAKVNVNRAVN 255 (306)
T ss_dssp HHHHHHTTEEEEEESHHHH
T ss_pred HHHHHHcCCeEEEeChHHH
Confidence 9999999999999998775
No 323
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=91.96 E-value=1.2 Score=39.18 Aligned_cols=40 Identities=25% Similarity=0.411 Sum_probs=32.0
Q ss_pred CCCEEEeCCCCCCCHHHHHHHH-HcCCCEEEEccccccCCCHHHH
Q 021575 221 RLPVVHFAAGGVATPADAAMMM-QLGCDGVFVGSGVFKSGDPVKR 264 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~~d~~~~l-~~GadgV~VGsai~~a~dp~~~ 264 (310)
+++|++ .|+| +++++.+++ ..+.||++||++-++ +++...
T Consensus 206 ~vrIlY--GGSV-~~~N~~~l~~~~diDG~LVGgAsL~-~~F~~I 246 (251)
T 2vxn_A 206 KLRILY--GGSV-NAANAATLYAKPDINGFLVGGASLK-PEFRDI 246 (251)
T ss_dssp HCEEEE--ESSC-CTTTHHHHHTSTTCCEEEESGGGGS-TTHHHH
T ss_pred cccEEE--cCCc-CHhHHHHHhcCCCCCeeeecHHHHH-HHHHHH
Confidence 478883 6888 588888877 679999999999999 876543
No 324
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=91.89 E-value=0.56 Score=42.95 Aligned_cols=118 Identities=14% Similarity=-0.016 Sum_probs=60.3
Q ss_pred HHHHHHH-HcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccC---cHHHHHHHHHcCCCE--EE
Q 021575 46 EQARVAE-EAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIG---HFVEAQILEAIGIDY--VD 119 (310)
Q Consensus 46 ~~A~~~~-~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~---~~~~a~~~~~aGad~--Vi 119 (310)
+.|+.+. +.||+.| +++...++.....=+ .....+.++++++.+++|+++..--+ ..+.++.+.++|++. ++
T Consensus 84 ~~A~~~v~~~GAdiI-DIg~eStrP~~~~vs-~ee~~~~V~~v~~~~~vPlsIDg~~~~T~~~eV~eaAleagag~~~lI 161 (323)
T 4djd_D 84 RWAQKCVAEYGADLI-YLKLDGADPEGANHS-VDQCVATVKEVLQAVGVPLVVVGCGDVEKDHEVLEAVAEAAAGENLLL 161 (323)
T ss_dssp HHHHHHHHTTCCSEE-EEECGGGCTTTTCCC-HHHHHHHHHHHHHHCCSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEE
T ss_pred HHHHHHHHHcCCCEE-EEcCccCCCCCCCCC-HHHHHHHHHHHHhhCCceEEEECCCCCCCCHHHHHHHHHhcCCCCCeE
Confidence 6788887 9999976 764221111100000 00013456667777899999872211 236678888888773 43
Q ss_pred eC-CCCCchhHHHHHHhcCCCCcEEEecCCHHHHHH----HHHhCC--CEEEEc
Q 021575 120 ES-EVLTPADEENHINKHNFRIPFVCGCRNLGEALR----RIREGA--AMIRTK 166 (310)
Q Consensus 120 ~~-~~~~~~~~~~~i~~~~~~i~~~v~~~t~~ea~~----~~~~Ga--d~V~v~ 166 (310)
.+ ......++...+.+++..+..+. ..+.+.+.+ +.++|. +-|.+.
T Consensus 162 Nsv~~~~~~~m~~laa~~g~~vVlmh-~~d~~~~~~l~~~a~~~GI~~e~IIlD 214 (323)
T 4djd_D 162 GNAEQENYKSLTAACMVHKHNIIARS-PLDINICKQLNILINEMNLPLDHIVID 214 (323)
T ss_dssp EEEBTTBCHHHHHHHHHHTCEEEEEC-SSCHHHHHHHHHHHHTTTCCGGGEEEE
T ss_pred EECCcccHHHHHHHHHHhCCeEEEEc-cchHHHHHHHHHHHHHcCCCHHHEEEe
Confidence 21 11223456666655443333322 224433333 345577 334444
No 325
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=91.86 E-value=3.6 Score=35.79 Aligned_cols=175 Identities=17% Similarity=0.166 Sum_probs=104.3
Q ss_pred CH-HHHHHHHHcCCcEE-EeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEE-e
Q 021575 44 TP-EQARVAEEAGACAV-MALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVD-E 120 (310)
Q Consensus 44 ~~-~~A~~~~~~Ga~~i-~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi-~ 120 (310)
|| +.|..++++||++| +.|. +|-|. -..+++..+++.++.|+=+-... ..+....+.+.-.+.|. .
T Consensus 26 dpv~aA~~ae~aGAdgITvHlR---eDrRH-------I~d~Dv~~L~~~~~~~lNlE~a~-t~emi~ia~~~kP~~vtLV 94 (243)
T 1m5w_A 26 DPVQAAFIAEQAGADGITVHLR---EDRRH-------ITDRDVRILRQTLDTRMNLEMAV-TEEMLAIAVETKPHFCCLV 94 (243)
T ss_dssp CHHHHHHHHHTTTCSEEEEECC---TTCSS-------SCHHHHHHHHHHCSSEEEEEECS-SHHHHHHHHHHCCSEEEEC
T ss_pred CHHHHHHHHHHcCCCEEEeCCC---CCccc-------CCHHHHHHHHHhcCCCEEeccCC-CHHHHHHHHHcCCCEEEEC
Confidence 44 67888899999999 6773 11121 12578888888877766554432 24678889999999984 3
Q ss_pred CC---------CCCc-------hhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhh
Q 021575 121 SE---------VLTP-------ADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSV 184 (310)
Q Consensus 121 ~~---------~~~~-------~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~ 184 (310)
++ ++.. .+..+.++..+..+.++++ .+.+....+.+.|+++|-+|...| ..+
T Consensus 95 PE~r~e~TTegGldv~~~~~~l~~~i~~L~~~GIrVSLFID-pd~~qi~aA~~~GA~~IELhTG~Y----a~a------- 162 (243)
T 1m5w_A 95 PEKRQEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFID-ADEEQIKAAAEVGAPFIEIHTGCY----ADA------- 162 (243)
T ss_dssp CCCSSCSSCCSCCCSGGGHHHHHHHHHHHHHTTCEEEEEEC-SCHHHHHHHHHTTCSEEEEECHHH----HHC-------
T ss_pred CCCCCCcCCCcchhHHhhHHHHHHHHHHHHHCCCEEEEEeC-CCHHHHHHHHHhCcCEEEEechhh----hcC-------
Confidence 33 1221 2334444444555666776 467788888899999998874221 100
Q ss_pred ccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHH-cCCCEEEEcccccc
Q 021575 185 MGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQ-LGCDGVFVGSGVFK 257 (310)
Q Consensus 185 ~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~-~GadgV~VGsai~~ 257 (310)
.+...- ..... .+...........+-|- |+-|+ +..++..+.. -+..-+-+|-+|+.
T Consensus 163 ---------~~~~~~---~~el~-~i~~aa~~A~~lGL~Vn--AGHgL-~y~Nv~~ia~ip~i~ElnIGHaiia 220 (243)
T 1m5w_A 163 ---------KTDAEQ---AQELA-RIAKAATFAASLGLKVN--AGHGL-TYHNVKAIAAIPEMHELNIGHAIIG 220 (243)
T ss_dssp ---------CSHHHH---HHHHH-HHHHHHHHHHHTTCEEE--EESSC-CTTTHHHHHTCTTEEEEEECHHHHH
T ss_pred ---------CCchhH---HHHHH-HHHHHHHHHHHcCCEEe--cCCCC-CHHHHHHHhhCCCCeEEccCHHHHH
Confidence 000000 00000 01011111122456676 78898 6899988764 36788999988874
No 326
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=91.80 E-value=2.1 Score=38.51 Aligned_cols=89 Identities=19% Similarity=0.275 Sum_probs=52.6
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAA 229 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~ 229 (310)
+....+.|++.+.+.|.++-. .+++.++- .++++.+.+. .++||++ ..
T Consensus 39 v~~li~~Gv~gl~v~GtTGE~-------------------~~Ls~eEr----------~~v~~~~~~~~~grvpVia-Gv 88 (301)
T 1xky_A 39 VNYLIDNGTTAIVVGGTTGES-------------------PTLTSEEK----------VALYRHVVSVVDKRVPVIA-GT 88 (301)
T ss_dssp HHHHHHTTCCEEEESSTTTTG-------------------GGSCHHHH----------HHHHHHHHHHHTTSSCEEE-EC
T ss_pred HHHHHHcCCCEEEECccccCh-------------------hhCCHHHH----------HHHHHHHHHHhCCCceEEe-CC
Confidence 455677899999988865422 22232211 1223323221 4699985 45
Q ss_pred CCCCCHHHHHH---HHHcCCCEEEEccccccCCCHHHHHHHHHH
Q 021575 230 GGVATPADAAM---MMQLGCDGVFVGSGVFKSGDPVKRAQAIVR 270 (310)
Q Consensus 230 GGI~t~~d~~~---~l~~GadgV~VGsai~~a~dp~~~a~~l~~ 270 (310)
|+.++.+-+.. +.++|||++++....|..+++....+-|..
T Consensus 89 g~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ 132 (301)
T 1xky_A 89 GSNNTHASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKA 132 (301)
T ss_dssp CCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHH
Confidence 66544443333 335799999999999976776655553433
No 327
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=91.79 E-value=2 Score=37.84 Aligned_cols=34 Identities=29% Similarity=0.461 Sum_probs=29.9
Q ss_pred CCCEEEeCCCCCCCHHHHHHHH-HcCCCEEEEcccccc
Q 021575 221 RLPVVHFAAGGVATPADAAMMM-QLGCDGVFVGSGVFK 257 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~~d~~~~l-~~GadgV~VGsai~~ 257 (310)
+++|+ -+|+| +++++.+++ ..+.||++||++-++
T Consensus 208 ~~rIl--YGGSV-~~~N~~~l~~~~diDG~LVGgASL~ 242 (254)
T 3m9y_A 208 ATRIQ--YGGSV-KPNNIKEYMAQTDIDGALVGGASLK 242 (254)
T ss_dssp TSEEE--ECSCC-CTTTHHHHHTSTTCCEEEESGGGSS
T ss_pred CccEE--EcCCc-CHHHHHHHHcCCCCCeEEeeHHhhC
Confidence 58888 36888 799999999 689999999999996
No 328
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=91.66 E-value=7 Score=34.82 Aligned_cols=83 Identities=14% Similarity=0.149 Sum_probs=46.5
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGad 116 (310)
..+..+.+.|+++++.+. . .|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|+|
T Consensus 26 ~lv~~li~~Gv~gl~~~G-t------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gad 98 (292)
T 2ojp_A 26 KLIDYHVASGTSAIVSVG-T------TGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIV 98 (292)
T ss_dssp HHHHHHHHHTCCEEEESS-T------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCS
T ss_pred HHHHHHHHcCCCEEEECc-c------ccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCC
Confidence 467777889999985441 1 1101012111 2333334433 589998765432 3556677789999
Q ss_pred EEE-eCCC---CCchhHHHHHHh
Q 021575 117 YVD-ESEV---LTPADEENHINK 135 (310)
Q Consensus 117 ~Vi-~~~~---~~~~~~~~~i~~ 135 (310)
+++ .+.. .+..++.++.+.
T Consensus 99 avlv~~P~y~~~s~~~l~~~f~~ 121 (292)
T 2ojp_A 99 GCLTVTPYYNRPSQEGLYQHFKA 121 (292)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHHH
Confidence 995 4432 245566655544
No 329
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=91.64 E-value=1.6 Score=40.33 Aligned_cols=75 Identities=13% Similarity=0.155 Sum_probs=56.4
Q ss_pred CCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHH
Q 021575 137 NFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQT 216 (310)
Q Consensus 137 ~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i 216 (310)
..++.++.++.+.+.+..+.+.|++++.+..+. -.++.+++.+
T Consensus 102 ~~Gi~~~st~~d~~svd~l~~~~v~~~KI~S~~-------------------------------------~~n~~LL~~v 144 (349)
T 2wqp_A 102 SKGMIFISTLFSRAAALRLQRMDIPAYKIGSGE-------------------------------------CNNYPLIKLV 144 (349)
T ss_dssp HTTCEEEEEECSHHHHHHHHHHTCSCEEECGGG-------------------------------------TTCHHHHHHH
T ss_pred HhCCeEEEeeCCHHHHHHHHhcCCCEEEECccc-------------------------------------ccCHHHHHHH
Confidence 468999999999998888888999998885321 2246788888
Q ss_pred hhcCCCCEEEeCCCCCCCHHHHHHHH----HcCCCEEEE
Q 021575 217 KQLGRLPVVHFAAGGVATPADAAMMM----QLGCDGVFV 251 (310)
Q Consensus 217 ~~~~~iPVi~iA~GGI~t~~d~~~~l----~~GadgV~V 251 (310)
.+ .+.||+ .+-|..|.+++..+. ..|.+-+++
T Consensus 145 a~-~gkPvi--LstGmat~~Ei~~Ave~i~~~G~~iiLl 180 (349)
T 2wqp_A 145 AS-FGKPII--LSTGMNSIESIKKSVEIIREAGVPYALL 180 (349)
T ss_dssp HT-TCSCEE--EECTTCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred Hh-cCCeEE--EECCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 77 578998 467778999987665 357765554
No 330
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=91.63 E-value=0.53 Score=41.41 Aligned_cols=38 Identities=24% Similarity=0.420 Sum_probs=30.3
Q ss_pred CCCEEEeCCCCCCCHHHHHHHH-HcCCCEEEEccccccCCCHH
Q 021575 221 RLPVVHFAAGGVATPADAAMMM-QLGCDGVFVGSGVFKSGDPV 262 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~~d~~~~l-~~GadgV~VGsai~~a~dp~ 262 (310)
+++|++ .|+| +++++.+++ ..+.||++||++-++ +++.
T Consensus 202 ~vrIlY--GGSV-~~~N~~~l~~~~diDG~LVGgAsL~-~~F~ 240 (247)
T 1ney_A 202 ELRILY--GGSA-NGSNAVTFKDKADVDGFLVGGASLK-PEFV 240 (247)
T ss_dssp HCCEEE--ESSC-CTTTGGGGTTCTTCCEEEESGGGGS-THHH
T ss_pred cceEEE--cCCc-CHhHHHHHHcCCCCCeeEeehHHHH-HHHH
Confidence 478983 6888 578877777 679999999999998 6644
No 331
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=91.62 E-value=7.5 Score=35.10 Aligned_cols=82 Identities=20% Similarity=0.232 Sum_probs=46.0
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGad 116 (310)
..+..+.+.|+++++.+. . .|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|||
T Consensus 48 ~lv~~li~~Gv~Gl~v~G-t------TGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gad 120 (314)
T 3qze_A 48 KLVDFHLQEGTNAIVAVG-T------TGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGAD 120 (314)
T ss_dssp HHHHHHHHHTCCEEEESS-G------GGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEECc-c------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCC
Confidence 467777899999985441 1 1100012111 2333334433 589998765432 4567888899999
Q ss_pred EEE-eCCC---CCchhHHHHHH
Q 021575 117 YVD-ESEV---LTPADEENHIN 134 (310)
Q Consensus 117 ~Vi-~~~~---~~~~~~~~~i~ 134 (310)
+++ .+.. .+..++.++.+
T Consensus 121 avlv~~P~y~~~s~~~l~~~f~ 142 (314)
T 3qze_A 121 ACLLVTPYYNKPTQEGMYQHFR 142 (314)
T ss_dssp EEEEECCCSSCCCHHHHHHHHH
T ss_pred EEEEcCCCCCCCCHHHHHHHHH
Confidence 996 4332 23445555543
No 332
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=91.55 E-value=7.7 Score=35.08 Aligned_cols=184 Identities=15% Similarity=0.126 Sum_probs=104.1
Q ss_pred ccCCCHHH----HHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhh-cCcceeeccccC-cHHHHHHHHHc
Q 021575 40 MDVVTPEQ----ARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQS-VTIPVMAKARIG-HFVEAQILEAI 113 (310)
Q Consensus 40 ~~~~~~~~----A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~-~~iPv~vk~~~~-~~~~a~~~~~a 113 (310)
.++.+.+. .+++++.+..-|+++.+. ..+ +.|... ....++...+. .++||.+.+--+ .++.+..+.++
T Consensus 22 fNv~n~e~~~avi~AAee~~sPvIlq~s~g--~~~-y~g~~~--~~~~v~~aa~~~~~VPValHLDHg~~~e~~~~ai~~ 96 (307)
T 3n9r_A 22 FNFVNFEMLNAIFEAGNEENSPLFIQASEG--AIK-YMGIDM--AVGMVKIMCERYPHIPVALHLDHGTTFESCEKAVKA 96 (307)
T ss_dssp EECSSHHHHHHHHHHHHHHTCCEEEEEEHH--HHH-HHCHHH--HHHHHHHHHHHSTTSCEEEEEEEECSHHHHHHHHHH
T ss_pred EeeCCHHHHHHHHHHHHHhCCCEEEEcChh--hhh-hCCHHH--HHHHHHHHHHhcCCCcEEEECCCCCCHHHHHHHHHh
Confidence 34555654 445577777766666311 111 111100 01233344444 689999864322 56888899999
Q ss_pred CCCEEE--eCCCCCch-------hHHHHHHhcCCCCc--E--------EE-------ecCCHHHHHHHH-HhCCCEEEEc
Q 021575 114 GIDYVD--ESEVLTPA-------DEENHINKHNFRIP--F--------VC-------GCRNLGEALRRI-REGAAMIRTK 166 (310)
Q Consensus 114 Gad~Vi--~~~~~~~~-------~~~~~i~~~~~~i~--~--------~v-------~~~t~~ea~~~~-~~Gad~V~v~ 166 (310)
|.+-|- .+. ++.+ ++.++..+.+..+. + .+ -.++++++.+-. +.|+|.+.+.
T Consensus 97 GFtSVMiDgS~-~p~eeNi~~Tk~vv~~ah~~gvsVEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAva 175 (307)
T 3n9r_A 97 GFTSVMIDASH-HAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKESQVDYLAPA 175 (307)
T ss_dssp TCSEEEECCTT-SCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCC----------CCSCCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCcEEEECCC-CCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcccccccccCCCHHHHHHHHHHHCCCEEEEe
Confidence 999983 332 2322 33344333221110 0 00 125788888855 5799998764
Q ss_pred CCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCC----------------
Q 021575 167 GEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAG---------------- 230 (310)
Q Consensus 167 g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~G---------------- 230 (310)
-.+--| .++.. ....-+++.++++++..++|++.=.+.
T Consensus 176 iGt~HG-----------------~Yk~~---------~~p~Ld~~~L~~I~~~~~~PLVlHGgS~vp~~~~~~~~~~gg~ 229 (307)
T 3n9r_A 176 IGTSHG-----------------AFKFK---------GEPKLDFERLQEVKRLTNIPLVLHGASAIPDNVRKSYLDAGGD 229 (307)
T ss_dssp SSCCSS-----------------SBCCS---------SSCCCCHHHHHHHHHHHCSCEEESSCCCCCHHHHHHHHHTTCC
T ss_pred cCCccc-----------------ccCCC---------CCCccCHHHHHHHHhcCCCCeEEeCCCCcchHHHHHHHHhcCc
Confidence 211101 01100 012334777888876667898753444
Q ss_pred -----CCCCHHHHHHHHHcCCCEEEEccccc
Q 021575 231 -----GVATPADAAMMMQLGCDGVFVGSGVF 256 (310)
Q Consensus 231 -----GI~t~~d~~~~l~~GadgV~VGsai~ 256 (310)
|+ ..+++.++++.|..=|=+++.+-
T Consensus 230 ~~~~~G~-p~e~i~~ai~~GV~KiNi~Tdl~ 259 (307)
T 3n9r_A 230 LKGSKGV-PFEFLQESVKGGINKVNTDTDLR 259 (307)
T ss_dssp CTTCBCC-CHHHHHHHHHTTEEEEEECHHHH
T ss_pred cCCCCCC-CHHHHHHHHHcCceEEEechHHH
Confidence 77 58999999999999999998776
No 333
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=91.54 E-value=1.1 Score=42.26 Aligned_cols=35 Identities=14% Similarity=0.387 Sum_probs=30.0
Q ss_pred CCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccC
Q 021575 221 RLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKS 258 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a 258 (310)
++.++ +|||| +.+.+.++.+.|+|.+.+|+.+..+
T Consensus 270 ~~~I~--aSggl-~~~~i~~l~~~GvD~~gvGt~l~~~ 304 (398)
T 2i1o_A 270 DIKIM--VSGGL-DENTVKKLREAGAEAFGVGTSISSA 304 (398)
T ss_dssp TSEEE--EESSC-CHHHHHHHHHTTCCEEEECHHHHTC
T ss_pred ceEEE--EeCCC-CHHHHHHHHHcCCCEEEeCcccCCC
Confidence 44454 89999 7999999999999999999988864
No 334
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=91.52 E-value=3.6 Score=37.98 Aligned_cols=93 Identities=11% Similarity=0.098 Sum_probs=62.0
Q ss_pred CCCCCCCHHHHHHHHhhcCcceeeccccCcHHH----HHHHHHcCCCEEE--eCCCCC--ch----hHHHHHHhcCCCCc
Q 021575 74 GVARMSDPQLIKEIKQSVTIPVMAKARIGHFVE----AQILEAIGIDYVD--ESEVLT--PA----DEENHINKHNFRIP 141 (310)
Q Consensus 74 G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~----a~~~~~aGad~Vi--~~~~~~--~~----~~~~~i~~~~~~i~ 141 (310)
||..+.++.+++++.+ ++.||+++-.....++ ++.+.+.|.+.++ +....+ +. ..+..+++..++++
T Consensus 118 ~S~~~~N~pLL~~va~-~gKPviLstGmstl~Ei~~Ave~i~~~g~~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp~lp 196 (350)
T 3g8r_A 118 ASCSFTDWPLLERIAR-SDKPVVASTAGARREDIDKVVSFMLHRGKDLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGVR 196 (350)
T ss_dssp CSSSTTCHHHHHHHHT-SCSCEEEECTTCCHHHHHHHHHHHHTTTCCEEEEECCCCSSCCGGGCCTTHHHHHHHHCTTSE
T ss_pred CcccccCHHHHHHHHh-hCCcEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCcccCCHHHHHHHHHHCCCCC
Confidence 6667899999999875 7999999877654333 2444557888776 443322 11 23445554434788
Q ss_pred EEEecCCH----HHHHHHHHhCCCEEEEcC
Q 021575 142 FVCGCRNL----GEALRRIREGAAMIRTKG 167 (310)
Q Consensus 142 ~~v~~~t~----~ea~~~~~~Gad~V~v~g 167 (310)
++.+-|+. .-+..+..+||++|=.|.
T Consensus 197 VG~SdHt~g~~~~~~~AAvAlGA~vIEkH~ 226 (350)
T 3g8r_A 197 IGYSTHEDPDLMEPIMLAVAQGATVFEKHV 226 (350)
T ss_dssp EEEEECCCSSCCHHHHHHHHTTCCEEEEEB
T ss_pred EEcCCCCCCCccHHHHHHHHcCCCEEEEec
Confidence 88887774 334577899999988774
No 335
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=91.44 E-value=7.9 Score=34.98 Aligned_cols=82 Identities=22% Similarity=0.259 Sum_probs=46.3
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGad 116 (310)
..++.+.+.|+++++.+. . .|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|||
T Consensus 49 ~lv~~li~~Gv~Gi~v~G-t------TGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gad 121 (315)
T 3na8_A 49 RSIERLIDGGVHAIAPLG-S------TGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAE 121 (315)
T ss_dssp HHHHHHHHTTCSEEECSS-G------GGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEECc-c------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 467777899999984441 1 1100012111 2333334433 689998765332 4567888899999
Q ss_pred EEE-eCCC---CCchhHHHHHH
Q 021575 117 YVD-ESEV---LTPADEENHIN 134 (310)
Q Consensus 117 ~Vi-~~~~---~~~~~~~~~i~ 134 (310)
+++ .+.. .+..++.++++
T Consensus 122 avlv~~P~y~~~s~~~l~~~f~ 143 (315)
T 3na8_A 122 AVMVLPISYWKLNEAEVFQHYR 143 (315)
T ss_dssp EEEECCCCSSCCCHHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHH
Confidence 996 3332 23455555544
No 336
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=91.40 E-value=3.2 Score=38.82 Aligned_cols=93 Identities=11% Similarity=0.055 Sum_probs=61.8
Q ss_pred CCCCCCCHHHHHHHHhhcCcceeeccccCcHHH----HHHHHHcCC-CEEE--eCCCCC--ch----hHHHHHHhcCCCC
Q 021575 74 GVARMSDPQLIKEIKQSVTIPVMAKARIGHFVE----AQILEAIGI-DYVD--ESEVLT--PA----DEENHINKHNFRI 140 (310)
Q Consensus 74 G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~----a~~~~~aGa-d~Vi--~~~~~~--~~----~~~~~i~~~~~~i 140 (310)
||..+.++.+++++.+ ++.||+++-.....++ ++.+.+.|. +.++ +....+ +. ..+..+++..+++
T Consensus 141 gS~~~~N~pLL~~va~-~gKPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~l 219 (385)
T 1vli_A 141 ASYEINHLPLLKYVAR-LNRPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEA 219 (385)
T ss_dssp CGGGTTCHHHHHHHHT-TCSCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTS
T ss_pred CcccccCHHHHHHHHh-cCCeEEEECCCCCHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCCC
Confidence 6767899999999875 6999999877654322 355556888 6665 333221 11 2244554432378
Q ss_pred cEEEecCC---HHHHHHHHHhCCCEEEEcC
Q 021575 141 PFVCGCRN---LGEALRRIREGAAMIRTKG 167 (310)
Q Consensus 141 ~~~v~~~t---~~ea~~~~~~Gad~V~v~g 167 (310)
+++.+-|+ ..-+..+..+||++|=.|.
T Consensus 220 pVG~SdHt~G~~~~~~AAvAlGA~iIEkHf 249 (385)
T 1vli_A 220 VIGFSDHSEHPTEAPCAAVRLGAKLIEKHF 249 (385)
T ss_dssp EEEEEECCSSSSHHHHHHHHTTCSEEEEEB
T ss_pred CEEeCCCCCCchHHHHHHHHcCCCEEEeCC
Confidence 88888777 4556667899999988773
No 337
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=91.31 E-value=0.78 Score=40.57 Aligned_cols=71 Identities=28% Similarity=0.288 Sum_probs=51.3
Q ss_pred CCCHHHHHHHHHcCCcEEEeccCCcccccccCCCC-CCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEE
Q 021575 42 VVTPEQARVAEEAGACAVMALERVPADIRSQGGVA-RMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVD 119 (310)
Q Consensus 42 ~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~-~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi 119 (310)
..+.+.++++.+.|++.++.+.+. . |+. ....++.++.+++.+++|+++...+...+++..+.++|||+|+
T Consensus 134 ~~~~~~a~~~~~~gad~v~~~~~~---~----Gt~~~~~~~~~l~~i~~~~~iPviv~gGI~t~eda~~~~~~GAdgVi 205 (264)
T 1xm3_A 134 SDDVVLARKLEELGVHAIMPGASP---I----GSGQGILNPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGADGVL 205 (264)
T ss_dssp CSCHHHHHHHHHHTCSCBEECSSS---T----TCCCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred CCCHHHHHHHHHhCCCEEEECCcc---c----CCCCCCCCHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHcCCCEEE
Confidence 346778888888888865332110 0 111 1224778899988889999998888767889999999999996
No 338
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=91.25 E-value=0.8 Score=41.40 Aligned_cols=81 Identities=11% Similarity=0.100 Sum_probs=55.8
Q ss_pred EEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCC
Q 021575 142 FVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGR 221 (310)
Q Consensus 142 ~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~ 221 (310)
++.+..+.+.|+...+.|++.|.+--...+ ++ +.+... .-....+.++++++.++
T Consensus 24 v~~d~~~~e~A~~ye~~GA~~lsvLe~~~~-Di--------------~~~~g~----------~R~~~~~~i~~i~~~v~ 78 (297)
T 4adt_A 24 VIMDVKNVEQAKIAEKAGAIGVMILENIPS-EL--------------RNTDGV----------ARSVDPLKIEEIRKCIS 78 (297)
T ss_dssp EEEEESSHHHHHHHHHHTCSEEEECCCCC--------------------CCCC----------CCCCCHHHHHHHHTTCC
T ss_pred cccCCCcHHHHHHHHHcCCCEEEEecCCCC-cc--------------hhcCCc----------ccCCCHHHHHHHHHhcC
Confidence 455778888898889999999876521100 10 000000 01235788999999899
Q ss_pred CCEEEeCCCCCCCHHHHHHHHHcCCCEE
Q 021575 222 LPVVHFAAGGVATPADAAMMMQLGCDGV 249 (310)
Q Consensus 222 iPVi~iA~GGI~t~~d~~~~l~~GadgV 249 (310)
+||++ -.++...+++..+..+|||.|
T Consensus 79 iPvl~--k~~i~~ide~qil~aaGAD~I 104 (297)
T 4adt_A 79 INVLA--KVRIGHFVEAQILEELKVDML 104 (297)
T ss_dssp SEEEE--EEETTCHHHHHHHHHTTCSEE
T ss_pred CCEEE--eccCCcHHHHHHHHHcCCCEE
Confidence 99984 468878888888889999999
No 339
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=91.21 E-value=7.9 Score=34.60 Aligned_cols=82 Identities=16% Similarity=0.198 Sum_probs=46.0
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGad 116 (310)
..+..+.+.|+++++.+. . .|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|||
T Consensus 25 ~lv~~li~~Gv~gi~v~G-t------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gad 97 (297)
T 2rfg_A 25 GLVDWQIKHGAHGLVPVG-T------TGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGAD 97 (297)
T ss_dssp HHHHHHHHTTCSEEECSS-G------GGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEECc-c------ccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCC
Confidence 567778899999984431 1 1101012111 2333334433 589998765432 3567788889999
Q ss_pred EEE-eCCC---CCchhHHHHHH
Q 021575 117 YVD-ESEV---LTPADEENHIN 134 (310)
Q Consensus 117 ~Vi-~~~~---~~~~~~~~~i~ 134 (310)
+++ .+.. .+..++.+..+
T Consensus 98 avlv~~P~y~~~s~~~l~~~f~ 119 (297)
T 2rfg_A 98 AVLCVAGYYNRPSQEGLYQHFK 119 (297)
T ss_dssp EEEECCCTTTCCCHHHHHHHHH
T ss_pred EEEEcCCCCCCCCHHHHHHHHH
Confidence 996 3332 23445555443
No 340
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=91.20 E-value=7.8 Score=34.49 Aligned_cols=83 Identities=20% Similarity=0.238 Sum_probs=46.8
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGad 116 (310)
..++.+.+.|+++++.+. . .|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|+|
T Consensus 26 ~lv~~li~~Gv~gl~~~G-t------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gad 98 (291)
T 3a5f_A 26 ELIEWHIKSKTDAIIVCG-T------TGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVD 98 (291)
T ss_dssp HHHHHHHHTTCCEEEESS-G------GGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEECc-c------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCC
Confidence 567778899999985441 1 1101112211 2333334433 589998765432 3567788889999
Q ss_pred EEE-eCCC---CCchhHHHHHHh
Q 021575 117 YVD-ESEV---LTPADEENHINK 135 (310)
Q Consensus 117 ~Vi-~~~~---~~~~~~~~~i~~ 135 (310)
+++ .+.. .+..++.++.+.
T Consensus 99 avlv~~P~y~~~s~~~l~~~f~~ 121 (291)
T 3a5f_A 99 GLLVITPYYNKTTQKGLVKHFKA 121 (291)
T ss_dssp EEEEECCCSSCCCHHHHHHHC-C
T ss_pred EEEEcCCCCCCCCHHHHHHHHHH
Confidence 996 4432 244555555543
No 341
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=91.14 E-value=4.2 Score=36.00 Aligned_cols=203 Identities=16% Similarity=0.139 Sum_probs=112.7
Q ss_pred eeeeccCcceeecchhhhhhCcccccCCCH-HHHHHHHHcCCcEE-EeccCCcccccccCCCCCCCCHHHHHHHHhhcCc
Q 021575 16 ITETKKSPFSVKVGLAQMLRGGVIMDVVTP-EQARVAEEAGACAV-MALERVPADIRSQGGVARMSDPQLIKEIKQSVTI 93 (310)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~-~~A~~~~~~Ga~~i-~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~i 93 (310)
++.++--.+++-.--+-.|+..--...-|| +.|..++++||++| +.|.+ |.|. -..+++..+++.+.+
T Consensus 26 ~~~~~m~~LgVNIDhVAtLRnARg~~~PDpv~aA~~ae~aGAdGITvHlRe---DrRH-------I~d~Dv~~L~~~i~t 95 (278)
T 3gk0_A 26 LTTPAAIDLGVNIDHVATLRNARGTAYPDPVRAALAAEDAGADAITLHLRE---DRRH-------IVDADVRTLRPRVKT 95 (278)
T ss_dssp CCCGGGSEEEEECHHHHHHHHHHSSSCSCHHHHHHHHHHTTCSEEEEECCT---TCSS-------SCHHHHHHHHHHCSS
T ss_pred cCCccccEEEechHhhhhhhccCCCCCCCHHHHHHHHHHcCCCEEEeccCC---Cccc-------CCHHHHHHHHHHcCC
Confidence 334443344544444444431111122334 67777899999998 67731 1111 125788888888877
Q ss_pred ceeeccccCcHHHHHHHHHcCCCEEE-eCCC---------CC----ch---hHHHHHHhcCCCCcEEEecCCHHHHHHHH
Q 021575 94 PVMAKARIGHFVEAQILEAIGIDYVD-ESEV---------LT----PA---DEENHINKHNFRIPFVCGCRNLGEALRRI 156 (310)
Q Consensus 94 Pv~vk~~~~~~~~a~~~~~aGad~Vi-~~~~---------~~----~~---~~~~~i~~~~~~i~~~v~~~t~~ea~~~~ 156 (310)
|+=+-... ..+..+.+.+.--+.|. .++. +. .. +.++.++..+..+.++++ .+.+....+.
T Consensus 96 ~lNlEma~-t~emi~ial~~kP~~vtLVPEkreE~TTegGlDv~~~~~~L~~~i~~L~~~GIrVSLFID-pd~~qI~aA~ 173 (278)
T 3gk0_A 96 RMNLECAV-TPEMLDIACEIRPHDACLVPEKRSELTTEGGLDVVGHFDAVRAACKQLADAGVRVSLFID-PDEAQIRAAH 173 (278)
T ss_dssp CEEEEECS-SHHHHHHHHHHCCSEEEECCCSGGGBCSSSSBCTTTTHHHHHHHHHHHHHTTCEEEEEEC-SCHHHHHHHH
T ss_pred CEEeecCC-CHHHHHHHHHcCCCEEEECCCCCCCcCCCcchhhhccHHHHHHHHHHHHHCCCEEEEEeC-CCHHHHHHHH
Confidence 77654432 34778889999999983 3321 11 22 334444444455567776 4677788888
Q ss_pred HhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCCCHH
Q 021575 157 REGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPA 236 (310)
Q Consensus 157 ~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~t~~ 236 (310)
+.|+|+|-++...|... .+.... ...+. .+...........+-|= |+-|+ +.+
T Consensus 174 ~~GAd~IELhTG~YA~a--------------------~~~~~~---~~el~-rl~~aA~~A~~lGL~Vn--AGHGL-~y~ 226 (278)
T 3gk0_A 174 ETGAPVIELHTGRYADA--------------------HDAAEQ---QREFE-RIATGVDAGIALGLKVN--AGHGL-HYT 226 (278)
T ss_dssp HHTCSEEEECCHHHHTC--------------------SSHHHH---HHHHH-HHHHHHHHHHHTTCEEE--ECTTC-CTT
T ss_pred HhCcCEEEEecchhhcc--------------------CCchhH---HHHHH-HHHHHHHHHHHcCCEEe--cCCCC-CHH
Confidence 99999998873211100 000000 00000 01111111222456665 78898 688
Q ss_pred HHHHHHH-cCCCEEEEcccccc
Q 021575 237 DAAMMMQ-LGCDGVFVGSGVFK 257 (310)
Q Consensus 237 d~~~~l~-~GadgV~VGsai~~ 257 (310)
++..+.+ -+..-+-+|-+|+.
T Consensus 227 Nv~~ia~ip~i~ElnIGHaiIa 248 (278)
T 3gk0_A 227 NVQAIAALPGIAELNIGHAIVA 248 (278)
T ss_dssp THHHHHTCTTEEEEEECHHHHH
T ss_pred HHHHHHhCCCCeEEecCHHHHH
Confidence 8876543 37788999988874
No 342
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=91.12 E-value=2.6 Score=38.98 Aligned_cols=46 Identities=11% Similarity=0.081 Sum_probs=38.2
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccc
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVF 256 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~ 256 (310)
+++..+++++.+++||+ +.+.+.+++++.++++.| +|.|++--.-.
T Consensus 225 ~~~~~~~l~~~~~iPI~--~de~i~~~~~~~~~i~~~~~d~v~ik~~~~ 271 (379)
T 2rdx_A 225 SYEECQQVRRVADQPMK--LDECVTGLHMAQRIVADRGAEICCLKISNL 271 (379)
T ss_dssp SHHHHHHHHTTCCSCEE--ECTTCCSHHHHHHHHHHTCCSEEEEETTTT
T ss_pred CHHHHHHHHhhCCCCEE--EeCCcCCHHHHHHHHHcCCCCEEEEecccc
Confidence 57778888888899998 789999999999999765 89998865444
No 343
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=91.11 E-value=1.7 Score=39.95 Aligned_cols=46 Identities=13% Similarity=0.190 Sum_probs=37.3
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccc
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVF 256 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~ 256 (310)
+++..+++++..++||+ +.+.+.+++++.++++.| +|.|++--.-+
T Consensus 228 ~~~~~~~l~~~~~iPI~--~de~~~~~~~~~~~i~~~~~d~v~ik~~~~ 274 (359)
T 1mdl_A 228 DYEGHQRIQSKLNVPVQ--MGENWLGPEEMFKALSIGACRLAMPDAMKI 274 (359)
T ss_dssp CHHHHHHHHHTCSSCEE--ECTTCCSHHHHHHHHHTTCCSEECCBTTTT
T ss_pred hHHHHHHHHHhCCCCEE--eCCCCCCHHHHHHHHHcCCCCEEeecchhh
Confidence 46677888887889998 789999999999999775 89988764443
No 344
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=91.04 E-value=2.3 Score=37.95 Aligned_cols=89 Identities=17% Similarity=0.255 Sum_probs=52.2
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAA 229 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~ 229 (310)
+....+.|++.+.+.|.++-. ++++.++- .++++.+.+. .++||++ ..
T Consensus 27 v~~li~~Gv~gl~~~GttGE~-------------------~~Ls~~Er----------~~v~~~~~~~~~gr~pvia-Gv 76 (289)
T 2yxg_A 27 INFLIENGVSGIVAVGTTGES-------------------PTLSHEEH----------KKVIEKVVDVVNGRVQVIA-GA 76 (289)
T ss_dssp HHHHHHTTCSEEEESSTTTTG-------------------GGSCHHHH----------HHHHHHHHHHHTTSSEEEE-EC
T ss_pred HHHHHHCCCCEEEECccccCh-------------------hhCCHHHH----------HHHHHHHHHHhCCCCcEEE-eC
Confidence 455677899999988865422 22232211 1223333221 4689985 45
Q ss_pred CCCCCHHHHHH---HHHcCCCEEEEccccccCCCHHHHHHHHHH
Q 021575 230 GGVATPADAAM---MMQLGCDGVFVGSGVFKSGDPVKRAQAIVR 270 (310)
Q Consensus 230 GGI~t~~d~~~---~l~~GadgV~VGsai~~a~dp~~~a~~l~~ 270 (310)
|+.++.+-+.. +.++|||++++....+..++.....+-|..
T Consensus 77 g~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ 120 (289)
T 2yxg_A 77 GSNCTEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGK 120 (289)
T ss_dssp CCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHH
Confidence 66544443332 335799999999999976666555543333
No 345
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=91.03 E-value=8.1 Score=34.42 Aligned_cols=82 Identities=13% Similarity=0.080 Sum_probs=46.3
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGad 116 (310)
..+..+.+.|+++++.+. . .|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|||
T Consensus 25 ~lv~~li~~Gv~gl~~~G-t------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gad 97 (294)
T 2ehh_A 25 NLIEFHVDNGTDAILVCG-T------TGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGAD 97 (294)
T ss_dssp HHHHHHHTTTCCEEEESS-T------TTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHCCCCEEEECc-c------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 467777889999985441 1 1101112211 2333334433 589998765432 3567788889999
Q ss_pred EEE-eCCC---CCchhHHHHHH
Q 021575 117 YVD-ESEV---LTPADEENHIN 134 (310)
Q Consensus 117 ~Vi-~~~~---~~~~~~~~~i~ 134 (310)
+++ .+.. .+..++.++.+
T Consensus 98 avlv~~P~y~~~s~~~l~~~f~ 119 (294)
T 2ehh_A 98 GALVVVPYYNKPTQRGLYEHFK 119 (294)
T ss_dssp EEEEECCCSSCCCHHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHH
Confidence 996 4432 24455555543
No 346
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=91.03 E-value=8.1 Score=34.36 Aligned_cols=82 Identities=21% Similarity=0.264 Sum_probs=46.3
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGad 116 (310)
..+..+.+.|+++++.+. . .|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|+|
T Consensus 25 ~lv~~li~~Gv~gl~~~G-t------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gad 97 (289)
T 2yxg_A 25 ENINFLIENGVSGIVAVG-T------TGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGAD 97 (289)
T ss_dssp HHHHHHHHTTCSEEEESS-T------TTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHCCCCEEEECc-c------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCC
Confidence 467778899999985441 1 1101112111 2333334433 589998765432 3567788889999
Q ss_pred EEE-eCCC---CCchhHHHHHH
Q 021575 117 YVD-ESEV---LTPADEENHIN 134 (310)
Q Consensus 117 ~Vi-~~~~---~~~~~~~~~i~ 134 (310)
+++ .+.. .+..++.++.+
T Consensus 98 avlv~~P~y~~~s~~~l~~~f~ 119 (289)
T 2yxg_A 98 AVLSITPYYNKPTQEGLRKHFG 119 (289)
T ss_dssp EEEEECCCSSCCCHHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHH
Confidence 996 4432 24455555543
No 347
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=91.02 E-value=8.4 Score=34.56 Aligned_cols=82 Identities=15% Similarity=0.166 Sum_probs=46.1
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGad 116 (310)
..+..+.+.|+++++.+. ..|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|||
T Consensus 41 ~lv~~li~~Gv~gl~v~G-------ttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gad 113 (304)
T 3cpr_A 41 EVAAYLVDKGLDSLVLAG-------TTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGAD 113 (304)
T ss_dssp HHHHHHHHTTCCEEEESS-------TTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEECc-------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCC
Confidence 467777889999985441 11101112211 2333334433 589998765432 4567788889999
Q ss_pred EEE-eCCC---CCchhHHHHHH
Q 021575 117 YVD-ESEV---LTPADEENHIN 134 (310)
Q Consensus 117 ~Vi-~~~~---~~~~~~~~~i~ 134 (310)
+++ .+.. .+..++.++.+
T Consensus 114 avlv~~P~y~~~~~~~l~~~f~ 135 (304)
T 3cpr_A 114 GLLVVTPYYSKPSQEGLLAHFG 135 (304)
T ss_dssp EEEEECCCSSCCCHHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHH
Confidence 995 4432 23445555543
No 348
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=90.92 E-value=2.4 Score=38.17 Aligned_cols=88 Identities=15% Similarity=0.214 Sum_probs=51.5
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAA 229 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~ 229 (310)
+....+.|++.+.+.|.++-. .+++.++- .++++.+.+. .++||++ ..
T Consensus 43 v~~li~~Gv~gl~v~GttGE~-------------------~~Ls~~Er----------~~v~~~~~~~~~grvpvia-Gv 92 (304)
T 3cpr_A 43 AAYLVDKGLDSLVLAGTTGES-------------------PTTTAAEK----------LELLKAVREEVGDRAKLIA-GV 92 (304)
T ss_dssp HHHHHHTTCCEEEESSTTTTT-------------------TTSCHHHH----------HHHHHHHHHHHTTTSEEEE-EC
T ss_pred HHHHHHcCCCEEEECccccCh-------------------hhCCHHHH----------HHHHHHHHHHhCCCCcEEe-cC
Confidence 455677899999988865422 12222211 1223333221 4689985 45
Q ss_pred CCCCCHHHHHH---HHHcCCCEEEEccccccCCCHHHHHHHHH
Q 021575 230 GGVATPADAAM---MMQLGCDGVFVGSGVFKSGDPVKRAQAIV 269 (310)
Q Consensus 230 GGI~t~~d~~~---~l~~GadgV~VGsai~~a~dp~~~a~~l~ 269 (310)
|+.++.+-+.. +.++|||++++....+..+++....+-|.
T Consensus 93 g~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~ 135 (304)
T 3cpr_A 93 GTNNTRTSVELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFG 135 (304)
T ss_dssp CCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHH
Confidence 66544443332 33579999999999997666655554333
No 349
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=90.89 E-value=0.22 Score=42.23 Aligned_cols=42 Identities=26% Similarity=0.336 Sum_probs=37.9
Q ss_pred HHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEEeCC
Q 021575 81 PQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESE 122 (310)
Q Consensus 81 ~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi~~~ 122 (310)
++.++++++.+++|+++...+...++++.+.++||++|.++.
T Consensus 139 p~iI~~i~~~~~~PiIaGGlI~~~edv~~al~aGA~aVsTs~ 180 (192)
T 3kts_A 139 PEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSN 180 (192)
T ss_dssp HHHHHHHHHHHCCCEEEESSCCSHHHHHHHHTTTEEEEEECC
T ss_pred HHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCeEEEeCC
Confidence 789999999999999999988888999999999999996443
No 350
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=90.88 E-value=2.3 Score=38.35 Aligned_cols=85 Identities=14% Similarity=0.164 Sum_probs=50.2
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAA 229 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~ 229 (310)
+....+.|++.+.+.|.++-. .+++.++- .++++.+.+. .++||++ ..
T Consensus 38 v~~li~~Gv~Gl~v~GtTGE~-------------------~~Ls~eEr----------~~v~~~~~~~~~grvpVia-Gv 87 (303)
T 2wkj_A 38 VQFNIQQGIDGLYVGGSTGEA-------------------FVQSLSER----------EQVLEIVAEEAKGKIKLIA-HV 87 (303)
T ss_dssp HHHHHHTTCSEEEESSTTTTG-------------------GGSCHHHH----------HHHHHHHHHHHTTTSEEEE-EC
T ss_pred HHHHHHcCCCEEEECeeccCh-------------------hhCCHHHH----------HHHHHHHHHHhCCCCcEEE-ec
Confidence 455677899999988865422 22232211 1223333221 4689985 45
Q ss_pred CCCCCHHHHHH---HHHcCCCEEEEccccccCCCHHHHHH
Q 021575 230 GGVATPADAAM---MMQLGCDGVFVGSGVFKSGDPVKRAQ 266 (310)
Q Consensus 230 GGI~t~~d~~~---~l~~GadgV~VGsai~~a~dp~~~a~ 266 (310)
|+.++.+.+.. +.++|||++++....|..+++....+
T Consensus 88 g~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~ 127 (303)
T 2wkj_A 88 GCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCD 127 (303)
T ss_dssp CCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCCEEEecCCCCCCCCHHHHHH
Confidence 65544443322 33579999999999997666655544
No 351
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=90.82 E-value=9.6 Score=34.87 Aligned_cols=83 Identities=13% Similarity=0.111 Sum_probs=46.8
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGad 116 (310)
..+..+.+.|+++|+.+. . .|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|||
T Consensus 56 ~lv~~li~~Gv~Gl~v~G-t------TGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gad 128 (343)
T 2v9d_A 56 ALIDDLIKAGVDGLFFLG-S------GGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGAD 128 (343)
T ss_dssp HHHHHHHHTTCSCEEESS-T------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEeCc-c------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 467777889999985441 1 1101112111 2333334443 589998765332 3567788889999
Q ss_pred EEE-eCCC---CCchhHHHHHHh
Q 021575 117 YVD-ESEV---LTPADEENHINK 135 (310)
Q Consensus 117 ~Vi-~~~~---~~~~~~~~~i~~ 135 (310)
+++ .+.. .+..++.++.+.
T Consensus 129 avlv~~P~Y~~~s~~~l~~~f~~ 151 (343)
T 2v9d_A 129 GIVVINPYYWKVSEANLIRYFEQ 151 (343)
T ss_dssp EEEEECCSSSCCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHHH
Confidence 995 4432 244555555543
No 352
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=90.80 E-value=8.5 Score=34.24 Aligned_cols=82 Identities=21% Similarity=0.243 Sum_probs=46.2
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGad 116 (310)
..+..+.+.|+++++.+. . .|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|+|
T Consensus 26 ~lv~~li~~Gv~gl~~~G-t------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gad 98 (291)
T 3tak_A 26 KLVEWHIEQGTNSIVAVG-T------TGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGAD 98 (291)
T ss_dssp HHHHHHHHHTCCEEEESS-T------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHCCCCEEEECc-c------ccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCC
Confidence 467777899999985441 1 1100012211 2333334433 589998765432 4567788899999
Q ss_pred EEE-eCCC---CCchhHHHHHH
Q 021575 117 YVD-ESEV---LTPADEENHIN 134 (310)
Q Consensus 117 ~Vi-~~~~---~~~~~~~~~i~ 134 (310)
+++ .+.. .+..++.++.+
T Consensus 99 avlv~~P~y~~~~~~~l~~~f~ 120 (291)
T 3tak_A 99 AALLVTPYYNKPTQEGLYQHYK 120 (291)
T ss_dssp EEEEECCCSSCCCHHHHHHHHH
T ss_pred EEEEcCCCCCCCCHHHHHHHHH
Confidence 996 4332 23445555544
No 353
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=90.77 E-value=2.5 Score=37.79 Aligned_cols=90 Identities=23% Similarity=0.335 Sum_probs=52.7
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAA 229 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~ 229 (310)
+....+.|++.+.+.|.++-. .+++.++- .++++.+.+. .++||++ ..
T Consensus 28 v~~li~~Gv~gl~~~GttGE~-------------------~~Ls~~Er----------~~v~~~~~~~~~gr~pvia-Gv 77 (292)
T 2ojp_A 28 IDYHVASGTSAIVSVGTTGES-------------------ATLNHDEH----------ADVVMMTLDLADGRIPVIA-GT 77 (292)
T ss_dssp HHHHHHHTCCEEEESSTTTTG-------------------GGSCHHHH----------HHHHHHHHHHHTTSSCEEE-EC
T ss_pred HHHHHHcCCCEEEECccccch-------------------hhCCHHHH----------HHHHHHHHHHhCCCCcEEE-ec
Confidence 455677899999988865422 22232211 1223333221 4689985 45
Q ss_pred CCCCCHHHHHHHH---HcCCCEEEEccccccCCCHHHHHHHHHHH
Q 021575 230 GGVATPADAAMMM---QLGCDGVFVGSGVFKSGDPVKRAQAIVRA 271 (310)
Q Consensus 230 GGI~t~~d~~~~l---~~GadgV~VGsai~~a~dp~~~a~~l~~~ 271 (310)
|+.++.+-+..+. ++|||++++....|..+++....+-|...
T Consensus 78 g~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~i 122 (292)
T 2ojp_A 78 GANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAI 122 (292)
T ss_dssp CCSSHHHHHHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHH
Confidence 6654444443333 46999999999999767766555534333
No 354
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=90.73 E-value=3 Score=37.43 Aligned_cols=87 Identities=17% Similarity=0.178 Sum_probs=51.0
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAA 229 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~ 229 (310)
+....+.|++.+.+.|.++-. .+++.++- .++++.+.+. .++||++ ..
T Consensus 34 v~~li~~Gv~gl~~~GttGE~-------------------~~Ls~~Er----------~~v~~~~~~~~~grvpvia-Gv 83 (297)
T 3flu_A 34 IDWHIENGTDGIVAVGTTGES-------------------ATLSVEEH----------TAVIEAVVKHVAKRVPVIA-GT 83 (297)
T ss_dssp HHHHHHTTCCEEEESSTTTTG-------------------GGSCHHHH----------HHHHHHHHHHHTTSSCEEE-EC
T ss_pred HHHHHHcCCCEEEeCccccCc-------------------ccCCHHHH----------HHHHHHHHHHhCCCCcEEE-eC
Confidence 445678899999988865422 22232211 1223333222 4699985 45
Q ss_pred CCCCCHHHHH---HHHHcCCCEEEEccccccCCCHHHHHHHH
Q 021575 230 GGVATPADAA---MMMQLGCDGVFVGSGVFKSGDPVKRAQAI 268 (310)
Q Consensus 230 GGI~t~~d~~---~~l~~GadgV~VGsai~~a~dp~~~a~~l 268 (310)
|+.++.+.+. .+.++|||++++....+..++.....+-|
T Consensus 84 g~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f 125 (297)
T 3flu_A 84 GANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHF 125 (297)
T ss_dssp CCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHH
Confidence 5554443333 23368999999999998766665554433
No 355
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=90.73 E-value=2.4 Score=37.97 Aligned_cols=88 Identities=18% Similarity=0.257 Sum_probs=51.7
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAA 229 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~ 229 (310)
+....+.|++.+.+.|.++-. .+++.++- .++++.+.+. .++||++ ..
T Consensus 27 v~~li~~Gv~gl~~~GttGE~-------------------~~Ls~~Er----------~~v~~~~~~~~~grvpvia-Gv 76 (294)
T 2ehh_A 27 IEFHVDNGTDAILVCGTTGES-------------------PTLTFEEH----------EKVIEFAVKRAAGRIKVIA-GT 76 (294)
T ss_dssp HHHHHTTTCCEEEESSTTTTG-------------------GGSCHHHH----------HHHHHHHHHHHTTSSEEEE-EC
T ss_pred HHHHHHCCCCEEEECccccCh-------------------hhCCHHHH----------HHHHHHHHHHhCCCCcEEE-ec
Confidence 445667899999988865422 22232211 1223333221 4689985 45
Q ss_pred CCCCCHHHHHH---HHHcCCCEEEEccccccCCCHHHHHHHHH
Q 021575 230 GGVATPADAAM---MMQLGCDGVFVGSGVFKSGDPVKRAQAIV 269 (310)
Q Consensus 230 GGI~t~~d~~~---~l~~GadgV~VGsai~~a~dp~~~a~~l~ 269 (310)
|+.++.+-+.. +.++|||++++....|..+++....+-|.
T Consensus 77 g~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~ 119 (294)
T 2ehh_A 77 GGNATHEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFK 119 (294)
T ss_dssp CCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHH
Confidence 66544444332 33579999999999997666655554333
No 356
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=90.68 E-value=2.4 Score=38.25 Aligned_cols=89 Identities=22% Similarity=0.354 Sum_probs=52.1
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAA 229 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~ 229 (310)
+....+.|++.+.+.|.++-. .+++.++- .++++.+.+. .++||++ ..
T Consensus 39 v~~li~~Gv~gl~v~GtTGE~-------------------~~Ls~eEr----------~~vi~~~~~~~~grvpVia-Gv 88 (306)
T 1o5k_A 39 VRYQLENGVNALIVLGTTGES-------------------PTVNEDER----------EKLVSRTLEIVDGKIPVIV-GA 88 (306)
T ss_dssp HHHHHHTTCCEEEESSGGGTG-------------------GGCCHHHH----------HHHHHHHHHHHTTSSCEEE-EC
T ss_pred HHHHHHcCCCEEEeCccccch-------------------hhCCHHHH----------HHHHHHHHHHhCCCCeEEE-cC
Confidence 455677899999888764422 22232211 1223333221 4699985 45
Q ss_pred CCCCCHHHHHH---HHHcCCCEEEEccccccCCCHHHHHHHHHH
Q 021575 230 GGVATPADAAM---MMQLGCDGVFVGSGVFKSGDPVKRAQAIVR 270 (310)
Q Consensus 230 GGI~t~~d~~~---~l~~GadgV~VGsai~~a~dp~~~a~~l~~ 270 (310)
|+.++.+.+.. +.++|||++++....|..+++....+-|..
T Consensus 89 g~~st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ 132 (306)
T 1o5k_A 89 GTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKY 132 (306)
T ss_dssp CCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHH
Confidence 66544443332 335799999999999976776555553433
No 357
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=90.66 E-value=1.6 Score=39.77 Aligned_cols=119 Identities=17% Similarity=0.051 Sum_probs=64.0
Q ss_pred HHHHHHHHcCCcEEEeccCC--cccccccCCCCCCCCHHHHHHHHhhc----CcceeeccccC---------cHHHHHHH
Q 021575 46 EQARVAEEAGACAVMALERV--PADIRSQGGVARMSDPQLIKEIKQSV----TIPVMAKARIG---------HFVEAQIL 110 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~--~~~~~~~~G~~~~~~~~~i~~i~~~~----~iPv~vk~~~~---------~~~~a~~~ 110 (310)
+.++.++++|+.++ .|+.+ ++.....+|.......+.+.+|+... ..++.+.-|.. ..++++.+
T Consensus 120 ~tv~~l~~aGaagv-~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~ai~Ra~Ay 198 (318)
T 1zlp_A 120 RFIRELISAGAKGV-FLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGIRRANLY 198 (318)
T ss_dssp HHHHHHHHTTCCEE-EEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEE-EECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHHHHHHHHH
Confidence 56888999999997 77633 22222222332333334555554322 33444443322 13567889
Q ss_pred HHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecC-----CHHHHHHHHHhCCCEEEEcC
Q 021575 111 EAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCR-----NLGEALRRIREGAAMIRTKG 167 (310)
Q Consensus 111 ~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~-----t~~ea~~~~~~Gad~V~v~g 167 (310)
.++|||.|......+..++.+..+. ..+|+++-+. ..-....+.++|+..|....
T Consensus 199 ~eAGAd~i~~e~~~~~e~~~~i~~~--l~~P~lan~~~~g~~~~~~~~eL~~lGv~~v~~~~ 258 (318)
T 1zlp_A 199 KEAGADATFVEAPANVDELKEVSAK--TKGLRIANMIEGGKTPLHTPEEFKEMGFHLIAHSL 258 (318)
T ss_dssp HHTTCSEEEECCCCSHHHHHHHHHH--SCSEEEEEECTTSSSCCCCHHHHHHHTCCEEEECS
T ss_pred HHcCCCEEEEcCCCCHHHHHHHHHh--cCCCEEEEeccCCCCCCCCHHHHHHcCCeEEEEch
Confidence 9999999974443233444444443 3355533221 11124556788999887643
No 358
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=90.65 E-value=0.76 Score=40.60 Aligned_cols=36 Identities=22% Similarity=0.447 Sum_probs=30.4
Q ss_pred CCCEEEeCCCCCCCHHHHHHHH-HcCCCEEEEccccccCC
Q 021575 221 RLPVVHFAAGGVATPADAAMMM-QLGCDGVFVGSGVFKSG 259 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~~d~~~~l-~~GadgV~VGsai~~a~ 259 (310)
+++|++ +|+| +++|+.+++ ..+.||++||++-++++
T Consensus 206 ~vrIlY--GGSV-~~~N~~~l~~~~diDG~LVGgASLka~ 242 (255)
T 1b9b_A 206 SIRILY--GGSI-KPDNFLGLIVQKDIDGGLVGGASLKES 242 (255)
T ss_dssp HSEEEE--ESSC-CHHHHTTTSSSTTCCEEEESGGGTSTH
T ss_pred cceEEE--cCcC-CHHHHHHHHcCCCCCeeEeehHhhcCc
Confidence 478883 6888 689999998 68999999999999854
No 359
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=90.64 E-value=1.8 Score=38.13 Aligned_cols=87 Identities=15% Similarity=0.258 Sum_probs=60.3
Q ss_pred CcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhcc--------CChh
Q 021575 208 APYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHY--------SDPE 279 (310)
Q Consensus 208 ~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~--------~~~~ 279 (310)
.+.+.+..+++.+++||+. =...+ ++-++.++..+|||+|++--+.+. + ...+.+.+..++. .+.+
T Consensus 88 gs~~dL~~ir~~v~lPvLr-KDfi~-~~~qi~ea~~~GAD~ilLi~a~l~---~-~~l~~l~~~a~~lGl~~lvEv~~~e 161 (251)
T 1i4n_A 88 GDPAFVRAARNLTCRPILA-KDFYI-DTVQVKLASSVGADAILIIARILT---A-EQIKEIYEAAEELGMDSLVEVHSRE 161 (251)
T ss_dssp CCTHHHHHHHTTCCSCEEE-ECCCC-STHHHHHHHHTTCSEEEEEGGGSC---H-HHHHHHHHHHHTTTCEEEEEECSHH
T ss_pred CCHHHHHHHHHhCCCCEEE-eeCCC-CHHHHHHHHHcCCCEEEEecccCC---H-HHHHHHHHHHHHcCCeEEEEeCCHH
Confidence 3466678888888999997 34566 567899999999999998877663 2 4555666666553 1222
Q ss_pred hhhhhhhhc-ccchhcccCccch
Q 021575 280 VLAEVSCGL-GEAMVGLNLSDHK 301 (310)
Q Consensus 280 ~~~~~~~~~-~~~~~~~~~~~~~ 301 (310)
.+ +....+ |..+.|+|.++++
T Consensus 162 E~-~~A~~l~g~~iIGinnr~l~ 183 (251)
T 1i4n_A 162 DL-EKVFSVIRPKIIGINTRDLD 183 (251)
T ss_dssp HH-HHHHTTCCCSEEEEECBCTT
T ss_pred HH-HHHHhcCCCCEEEEeCcccc
Confidence 22 233455 8899999988754
No 360
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=90.62 E-value=2.4 Score=37.95 Aligned_cols=85 Identities=12% Similarity=0.100 Sum_probs=50.8
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAA 229 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~ 229 (310)
+....+.|++.+.+.|.++-. .+++.++- .++++.+.+. .++||++ ..
T Consensus 30 v~~li~~Gv~gl~~~GttGE~-------------------~~Ls~~Er----------~~v~~~~~~~~~gr~pvia-Gv 79 (294)
T 3b4u_A 30 ARRCLSNGCDSVTLFGTTGEG-------------------CSVGSRER----------QAILSSFIAAGIAPSRIVT-GV 79 (294)
T ss_dssp HHHHHHTTCSEEEESSTTTTG-------------------GGSCHHHH----------HHHHHHHHHTTCCGGGEEE-EE
T ss_pred HHHHHHcCCCEEEECccccCh-------------------hhCCHHHH----------HHHHHHHHHHhCCCCcEEE-eC
Confidence 455677899999988865422 22222211 2334444433 3689985 45
Q ss_pred CCCCCHHHHHH---HHHcCCCEEEEccccccC-CCHHHHHH
Q 021575 230 GGVATPADAAM---MMQLGCDGVFVGSGVFKS-GDPVKRAQ 266 (310)
Q Consensus 230 GGI~t~~d~~~---~l~~GadgV~VGsai~~a-~dp~~~a~ 266 (310)
|+.++.+.+.. +.++|||++++....+-. +++....+
T Consensus 80 g~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~ 120 (294)
T 3b4u_A 80 LVDSIEDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFA 120 (294)
T ss_dssp CCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHH
T ss_pred CCccHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHH
Confidence 66544433322 235799999999999976 56655444
No 361
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=90.59 E-value=1.2 Score=39.77 Aligned_cols=83 Identities=18% Similarity=0.082 Sum_probs=50.5
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHc--CCCEEE-eCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAI--GIDYVD-ESE 122 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~a--Gad~Vi-~~~ 122 (310)
+.|+.+.+.||+.| +++..+...... .+....++.+++.+++|+++... ..+.++.+.++ |++.|- .+.
T Consensus 38 ~~a~~~v~~GAdiI-DIg~~s~~~eE~-----~rv~~vi~~l~~~~~~pisIDT~--~~~v~~aal~a~~Ga~iINdvs~ 109 (271)
T 2yci_X 38 EWARRQAEKGAHYL-DVNTGPTADDPV-----RVMEWLVKTIQEVVDLPCCLDST--NPDAIEAGLKVHRGHAMINSTSA 109 (271)
T ss_dssp HHHHHHHHTTCSEE-EEECCSCSSCHH-----HHHHHHHHHHHHHCCCCEEEECS--CHHHHHHHHHHCCSCCEEEEECS
T ss_pred HHHHHHHHCCCCEE-EEcCCcCchhHH-----HHHHHHHHHHHHhCCCeEEEeCC--CHHHHHHHHHhCCCCCEEEECCC
Confidence 57888999999966 775211110000 01134566677778999998765 44677888888 999994 333
Q ss_pred CCCc--hhHHHHHHhcC
Q 021575 123 VLTP--ADEENHINKHN 137 (310)
Q Consensus 123 ~~~~--~~~~~~i~~~~ 137 (310)
. .. .+....+++++
T Consensus 110 ~-~d~~~~~~~~~a~~~ 125 (271)
T 2yci_X 110 D-QWKMDIFFPMAKKYE 125 (271)
T ss_dssp C-HHHHHHHHHHHHHHT
T ss_pred C-ccccHHHHHHHHHcC
Confidence 2 22 34445554443
No 362
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=90.55 E-value=9.3 Score=34.29 Aligned_cols=83 Identities=20% Similarity=0.231 Sum_probs=47.2
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGad 116 (310)
..+..+.+.|+++++.+. . .|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|||
T Consensus 37 ~lv~~li~~Gv~gl~v~G-t------TGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gad 109 (306)
T 1o5k_A 37 RLVRYQLENGVNALIVLG-T------TGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGAN 109 (306)
T ss_dssp HHHHHHHHTTCCEEEESS-G------GGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEeCc-c------ccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCC
Confidence 467777889999985441 1 1101012111 2333334433 589998765432 3567788889999
Q ss_pred EEE-eCCC---CCchhHHHHHHh
Q 021575 117 YVD-ESEV---LTPADEENHINK 135 (310)
Q Consensus 117 ~Vi-~~~~---~~~~~~~~~i~~ 135 (310)
+++ .+.. .+..++.++.+.
T Consensus 110 avlv~~P~y~~~s~~~l~~~f~~ 132 (306)
T 1o5k_A 110 GVLVVTPYYNKPTQEGLYQHYKY 132 (306)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHHH
Confidence 996 4432 245556655544
No 363
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=90.53 E-value=0.18 Score=43.70 Aligned_cols=76 Identities=14% Similarity=0.231 Sum_probs=47.3
Q ss_pred ecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHh---hcCC
Q 021575 145 GCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTK---QLGR 221 (310)
Q Consensus 145 ~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~---~~~~ 221 (310)
.+.+.+++..+.+.|+|-|-+-..-..| +.+|++.+++.++ +..+
T Consensus 7 c~~s~~~a~~A~~~GAdRIELc~~L~~G--------------------------------GlTPS~g~i~~~~~~~~~~~ 54 (224)
T 2bdq_A 7 CAENLTDLTRLDKAIISRVELCDNLAVG--------------------------------GTTPSYGVIKEANQYLHEKG 54 (224)
T ss_dssp EEETTTTGGGCCTTTCCEEEEEBCGGGT--------------------------------CBCCCHHHHHHHHHHHHHTT
T ss_pred EECCHHHHHHHHHcCCCEEEEcCCcccC--------------------------------CcCCCHHHHHHHHHhhhhcC
Confidence 4556777888888999987654321100 2345566777676 6667
Q ss_pred CCEEEe--C-CCCC-CCH-------HHHHHHHHcCCCEEEEc
Q 021575 222 LPVVHF--A-AGGV-ATP-------ADAAMMMQLGCDGVFVG 252 (310)
Q Consensus 222 iPVi~i--A-~GGI-~t~-------~d~~~~l~~GadgV~VG 252 (310)
+||.+. . .|+. .|. +|+..+.++|+|||++|
T Consensus 55 ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G 96 (224)
T 2bdq_A 55 ISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESDALVLG 96 (224)
T ss_dssp CEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 887664 2 2332 232 35666677888888888
No 364
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=90.47 E-value=10 Score=34.69 Aligned_cols=162 Identities=17% Similarity=0.210 Sum_probs=87.5
Q ss_pred HHHHHHHHcCCCEEE--eCC----CCCchhHHHHHHh-cCCCCcEEEe--cCCHHHH----HHHHHhCCCEEEEcCCCCC
Q 021575 105 VEAQILEAIGIDYVD--ESE----VLTPADEENHINK-HNFRIPFVCG--CRNLGEA----LRRIREGAAMIRTKGEAGT 171 (310)
Q Consensus 105 ~~a~~~~~aGad~Vi--~~~----~~~~~~~~~~i~~-~~~~i~~~v~--~~t~~ea----~~~~~~Gad~V~v~g~~~~ 171 (310)
..++-+.+.|+|+++ ++- .++.+|-.+.++. ..-.++++++ .++.+++ +.+.++|+|.+.+..+.|.
T Consensus 51 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~ 130 (344)
T 2hmc_A 51 RKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLS 130 (344)
T ss_dssp HHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSS
T ss_pred HHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCccC
Confidence 445667789999985 322 3555555444443 1223555554 4565554 4456789999887766543
Q ss_pred --cchHHHHHHHHhhcc-c------eEeec----ccChhHHHHh-h--------hccCC--cHHHHHHHhhcC--CCCEE
Q 021575 172 --GNIIEAVRHVRSVMG-D------IRVLR----NMDDDEVFTF-A--------KKIAA--PYDLVMQTKQLG--RLPVV 225 (310)
Q Consensus 172 --~~~~~~~~~~r~~~~-~------~~~l~----~~~~d~~~~~-~--------~~~~~--~~~~i~~i~~~~--~iPVi 225 (310)
..-....++.+.... . +-.+| .++++.+.+. + |+... +...+.++.+.. ++.|+
T Consensus 131 ~~~s~~~l~~~f~~IA~aa~~lPiilYn~P~tg~~l~~e~~~~L~a~~pnIvGiKdssgp~d~~~~~~~~~~~~~~f~v~ 210 (344)
T 2hmc_A 131 RGSVIAAQKAHFKAILSAAPEIPAVIYNSPYYGFATRADLFFALRAEHKNLVGFKEFGGPADMRYAAENITSRDDEVTLM 210 (344)
T ss_dssp STTCHHHHHHHHHHHHHHSTTSCEEEEEBGGGTBCCCHHHHHHHHHHCTTEEEEEECSCHHHHHHHHHHTSCSSSSCEEE
T ss_pred CCCCHHHHHHHHHHHHhhCCCCcEEEEecCccCCCcCHHHHHHHHhcCCCEEEEEcCCCCCCHHHHHHHHHHcCCCEEEE
Confidence 233456666666544 2 33344 2344444333 2 22334 455555554432 23343
Q ss_pred EeCCCCCCCHHHHHHHH-HcCCCEEEEccccccCCCHHHHHHHHHHH---HhccC
Q 021575 226 HFAAGGVATPADAAMMM-QLGCDGVFVGSGVFKSGDPVKRAQAIVRA---VTHYS 276 (310)
Q Consensus 226 ~iA~GGI~t~~d~~~~l-~~GadgV~VGsai~~a~dp~~~a~~l~~~---i~~~~ 276 (310)
.|- -+.+...+ ..|++|++-+.+-+- |.... ++.++ ++++.
T Consensus 211 ----~G~--D~~~l~~l~~~Ga~G~is~~anv~---P~~~~-~l~~a~~~~~~Gd 255 (344)
T 2hmc_A 211 ----IGV--DTAVVHGFVNCGATGAITGIGNVL---PKEVI-HLCKLSQAAAKGD 255 (344)
T ss_dssp ----ECS--GGGHHHHHHHSCCCEEEESGGGTS---HHHHH-HHHHHHHHHTTTC
T ss_pred ----ECc--HHHHHHHHHHcCCCEEEeCHHHhh---HHHHH-HHHHhHHHHhcCc
Confidence 342 24456677 899999999987653 54333 35555 55444
No 365
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=90.46 E-value=2.9 Score=37.67 Aligned_cols=89 Identities=17% Similarity=0.209 Sum_probs=52.0
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAA 229 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~ 229 (310)
+....+.|++.+.+.|.++-. .+++.++- .++++.+.+. .++||++ ..
T Consensus 42 v~~li~~Gv~gi~v~GttGE~-------------------~~Lt~~Er----------~~v~~~~~~~~~grvpvia-Gv 91 (304)
T 3l21_A 42 ANHLVDQGCDGLVVSGTTGES-------------------PTTTDGEK----------IELLRAVLEAVGDRARVIA-GA 91 (304)
T ss_dssp HHHHHHTTCSEEEESSTTTTG-------------------GGSCHHHH----------HHHHHHHHHHHTTTSEEEE-EC
T ss_pred HHHHHHcCCCEEEeCccccch-------------------hhCCHHHH----------HHHHHHHHHHhCCCCeEEE-eC
Confidence 455677899999988865422 12222211 1223333222 4689985 45
Q ss_pred CCCCCHHHHH---HHHHcCCCEEEEccccccCCCHHHHHHHHHH
Q 021575 230 GGVATPADAA---MMMQLGCDGVFVGSGVFKSGDPVKRAQAIVR 270 (310)
Q Consensus 230 GGI~t~~d~~---~~l~~GadgV~VGsai~~a~dp~~~a~~l~~ 270 (310)
|+-++.+-+. .+.++|||++++....|-.+++....+-|..
T Consensus 92 g~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ 135 (304)
T 3l21_A 92 GTYDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTA 135 (304)
T ss_dssp CCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHH
Confidence 5554433332 2235799999999999887776655553433
No 366
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=90.46 E-value=2.5 Score=38.31 Aligned_cols=49 Identities=20% Similarity=0.281 Sum_probs=32.1
Q ss_pred CCCCEEEeCCCCCCCHHHHH---HHHHcCCCEEEEccccccCCCHHHHHHHHH
Q 021575 220 GRLPVVHFAAGGVATPADAA---MMMQLGCDGVFVGSGVFKSGDPVKRAQAIV 269 (310)
Q Consensus 220 ~~iPVi~iA~GGI~t~~d~~---~~l~~GadgV~VGsai~~a~dp~~~a~~l~ 269 (310)
.++||++ ..|+.++.+.+. .+.++|||++++....+-.+++....+-|.
T Consensus 91 grvpVia-Gvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~ 142 (314)
T 3qze_A 91 GRIPVIA-GTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFR 142 (314)
T ss_dssp TSSCEEE-ECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHH
T ss_pred CCCcEEE-eCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHH
Confidence 4699985 455554444333 233689999999999887677655554333
No 367
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=90.44 E-value=2.6 Score=38.59 Aligned_cols=89 Identities=12% Similarity=0.138 Sum_probs=52.1
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAA 229 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~ 229 (310)
+....+.|++.+.+.|.++-. .+++.++- .++++.+.+. .++||++ ..
T Consensus 61 v~~li~~Gv~Gl~v~GtTGE~-------------------~~Ls~eEr----------~~vi~~~ve~~~grvpVia-Gv 110 (332)
T 2r8w_A 61 IARLDAAEVDSVGILGSTGIY-------------------MYLTREER----------RRAIEAAATILRGRRTLMA-GI 110 (332)
T ss_dssp HHHHHHHTCSEEEESSTTTTG-------------------GGSCHHHH----------HHHHHHHHHHHTTSSEEEE-EE
T ss_pred HHHHHHcCCCEEEECccccCh-------------------hhCCHHHH----------HHHHHHHHHHhCCCCcEEE-ec
Confidence 455677899999988865422 22232211 1223333222 4689985 45
Q ss_pred CCCCCHHHHH---HHHHcCCCEEEEccccccCCCHHHHHHHHHH
Q 021575 230 GGVATPADAA---MMMQLGCDGVFVGSGVFKSGDPVKRAQAIVR 270 (310)
Q Consensus 230 GGI~t~~d~~---~~l~~GadgV~VGsai~~a~dp~~~a~~l~~ 270 (310)
|+.++.+-+. .+.++|||++++....|..++.....+-|..
T Consensus 111 g~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~ 154 (332)
T 2r8w_A 111 GALRTDEAVALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAA 154 (332)
T ss_dssp CCSSHHHHHHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHH
Confidence 6654444332 2335799999999999976666555543333
No 368
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=90.30 E-value=3.3 Score=36.95 Aligned_cols=87 Identities=16% Similarity=0.275 Sum_probs=50.8
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAA 229 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~ 229 (310)
+....+.|++.+.+.|.++-. .+++.++- .++++.+.+. .++||++ ..
T Consensus 28 v~~li~~Gv~gl~~~GttGE~-------------------~~Ls~~Er----------~~v~~~~~~~~~gr~pvia-Gv 77 (291)
T 3tak_A 28 VEWHIEQGTNSIVAVGTTGEA-------------------STLSMEEH----------TQVIKEIIRVANKRIPIIA-GT 77 (291)
T ss_dssp HHHHHHHTCCEEEESSTTTTG-------------------GGSCHHHH----------HHHHHHHHHHHTTSSCEEE-EC
T ss_pred HHHHHHCCCCEEEECcccccc-------------------ccCCHHHH----------HHHHHHHHHHhCCCCeEEE-eC
Confidence 445678899999888865422 12222211 1223333222 4689985 45
Q ss_pred CCCCCHHHHH---HHHHcCCCEEEEccccccCCCHHHHHHHH
Q 021575 230 GGVATPADAA---MMMQLGCDGVFVGSGVFKSGDPVKRAQAI 268 (310)
Q Consensus 230 GGI~t~~d~~---~~l~~GadgV~VGsai~~a~dp~~~a~~l 268 (310)
|+-++.+.+. .+.++|+|++++....+..++.....+-|
T Consensus 78 g~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f 119 (291)
T 3tak_A 78 GANSTREAIELTKAAKDLGADAALLVTPYYNKPTQEGLYQHY 119 (291)
T ss_dssp CCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHH
Confidence 5554433333 23367999999999998766665554433
No 369
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=90.30 E-value=2.5 Score=37.81 Aligned_cols=86 Identities=15% Similarity=0.224 Sum_probs=50.5
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAA 229 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~ 229 (310)
+....+.|++.+.+.|.++-. .+++.++- .++++.+.+. .++||++ ..
T Consensus 29 v~~li~~Gv~gl~v~GttGE~-------------------~~Lt~~Er----------~~v~~~~~~~~~grvpvia-Gv 78 (292)
T 3daq_A 29 VNFLLENNAQAIIVNGTTAES-------------------PTLTTDEK----------ELILKTVIDLVDKRVPVIA-GT 78 (292)
T ss_dssp HHHHHHTTCCEEEESSGGGTG-------------------GGSCHHHH----------HHHHHHHHHHHTTSSCEEE-EC
T ss_pred HHHHHHcCCCEEEECcccccc-------------------ccCCHHHH----------HHHHHHHHHHhCCCCcEEE-eC
Confidence 455678899999988764422 22232211 1223323222 4799985 44
Q ss_pred CCCCCHHHHHH----HHHcCCCEEEEccccccCCCHHHHHHHH
Q 021575 230 GGVATPADAAM----MMQLGCDGVFVGSGVFKSGDPVKRAQAI 268 (310)
Q Consensus 230 GGI~t~~d~~~----~l~~GadgV~VGsai~~a~dp~~~a~~l 268 (310)
|+-+ .++..+ +.++|||++++....+..++.....+-|
T Consensus 79 g~~~-t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f 120 (292)
T 3daq_A 79 GTND-TEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHF 120 (292)
T ss_dssp CCSC-HHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHH
T ss_pred Cccc-HHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHH
Confidence 5554 444333 3357999999999988766665554433
No 370
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=90.21 E-value=0.82 Score=42.55 Aligned_cols=73 Identities=21% Similarity=0.233 Sum_probs=52.0
Q ss_pred CCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhc--CcceeeccccCcHHHHHHHHHcCCCEEE
Q 021575 42 VVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSV--TIPVMAKARIGHFVEAQILEAIGIDYVD 119 (310)
Q Consensus 42 ~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~--~iPv~vk~~~~~~~~a~~~~~aGad~Vi 119 (310)
+.+++.|+.++++|+++| .+..... +.. .......+.+.++++.+ ++||++...+....++..+.+.|||.|.
T Consensus 237 v~~~e~a~~a~~~Gad~I-~vs~~gg--r~~--~~g~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~ 311 (368)
T 2nli_A 237 IQHPEDADMAIKRGASGI-WVSNHGA--RQL--YEAPGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVA 311 (368)
T ss_dssp ECSHHHHHHHHHTTCSEE-EECCGGG--TSC--SSCCCHHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEE
T ss_pred CCCHHHHHHHHHcCCCEE-EEcCCCc--CCC--CCCCChHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 467899999999999998 3320000 000 00123457888888777 6999998877777888888889999995
No 371
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=90.21 E-value=2.9 Score=38.44 Aligned_cols=89 Identities=17% Similarity=0.203 Sum_probs=52.2
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAA 229 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~ 229 (310)
+....+.|++.+.+.|.++-. .+++.++- .++++.+.+. .++||++ ..
T Consensus 58 v~~li~~Gv~Gl~v~GtTGE~-------------------~~Ls~eEr----------~~vi~~~ve~~~grvpVia-Gv 107 (343)
T 2v9d_A 58 IDDLIKAGVDGLFFLGSGGEF-------------------SQLGAEER----------KAIARFAIDHVDRRVPVLI-GT 107 (343)
T ss_dssp HHHHHHTTCSCEEESSTTTTG-------------------GGSCHHHH----------HHHHHHHHHHHTTSSCEEE-EC
T ss_pred HHHHHHcCCCEEEeCccccCh-------------------hhCCHHHH----------HHHHHHHHHHhCCCCcEEE-ec
Confidence 455677899999888865422 22232211 1223333222 4689985 45
Q ss_pred CCCCCHHHHHH---HHHcCCCEEEEccccccCCCHHHHHHHHHH
Q 021575 230 GGVATPADAAM---MMQLGCDGVFVGSGVFKSGDPVKRAQAIVR 270 (310)
Q Consensus 230 GGI~t~~d~~~---~l~~GadgV~VGsai~~a~dp~~~a~~l~~ 270 (310)
|+.++.+-+.. +.++|||++++....|..+++....+-|..
T Consensus 108 g~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~ 151 (343)
T 2v9d_A 108 GGTNARETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQ 151 (343)
T ss_dssp CSSCHHHHHHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHH
Confidence 66544443332 335799999999999976776655553433
No 372
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=90.16 E-value=0.85 Score=41.94 Aligned_cols=71 Identities=20% Similarity=0.078 Sum_probs=49.7
Q ss_pred HHHHHHHHcCCcEEEec-cCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcC-CCEEE
Q 021575 46 EQARVAEEAGACAVMAL-ERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIG-IDYVD 119 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L-~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aG-ad~Vi 119 (310)
++++.++++|++.| ++ +..........+ ...+.+.++++++.+++||++...+...++++.+++.| ||.|.
T Consensus 233 ~la~~L~~~Gvd~i-~vs~g~~~~~~~~~~--~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~ 305 (340)
T 3gr7_A 233 PYAKRMKEQGVDLV-DVSSGAIVPARMNVY--PGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLVF 305 (340)
T ss_dssp HHHHHHHHTTCCEE-EEECCCSSCCCCCCC--TTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHcCCCEE-EEecCCccCCCCCCC--ccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEEE
Confidence 68999999999987 43 211000000000 11246788999999999999988877778898899988 99995
No 373
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=90.08 E-value=10 Score=33.98 Aligned_cols=82 Identities=13% Similarity=0.106 Sum_probs=46.0
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGad 116 (310)
..+..+.+.|+++++.+. . .|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|||
T Consensus 36 ~lv~~li~~Gv~Gl~v~G-t------TGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gad 108 (303)
T 2wkj_A 36 RLVQFNIQQGIDGLYVGG-S------TGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFD 108 (303)
T ss_dssp HHHHHHHHTTCSEEEESS-T------TTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEECe-e------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCC
Confidence 467777899999985441 1 1101012111 2333334433 589998765432 3567788889999
Q ss_pred EEE-eCCC---CCchhHHHHHH
Q 021575 117 YVD-ESEV---LTPADEENHIN 134 (310)
Q Consensus 117 ~Vi-~~~~---~~~~~~~~~i~ 134 (310)
+++ .+.. .+..++.++.+
T Consensus 109 avlv~~P~y~~~s~~~l~~~f~ 130 (303)
T 2wkj_A 109 AVSAVTPFYYPFSFEEHCDHYR 130 (303)
T ss_dssp EEEEECCCSSCCCHHHHHHHHH
T ss_pred EEEecCCCCCCCCHHHHHHHHH
Confidence 996 4432 23445554443
No 374
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=90.06 E-value=2.3 Score=38.01 Aligned_cols=87 Identities=11% Similarity=0.122 Sum_probs=51.0
Q ss_pred HHHHHH-hCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeC
Q 021575 152 ALRRIR-EGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFA 228 (310)
Q Consensus 152 a~~~~~-~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA 228 (310)
+....+ .|++.+.+.|.++-. .+++.++- .++++.+.+. .++||++ .
T Consensus 30 v~~li~~~Gv~gl~~~GttGE~-------------------~~Ls~~Er----------~~v~~~~~~~~~grvpvia-G 79 (293)
T 1f6k_A 30 IRHNIDKMKVDGLYVGGSTGEN-------------------FMLSTEEK----------KEIFRIAKDEAKDQIALIA-Q 79 (293)
T ss_dssp HHHHHHTSCCSEEEESSGGGTG-------------------GGSCHHHH----------HHHHHHHHHHHTTSSEEEE-E
T ss_pred HHHHHhhCCCcEEEeCccccch-------------------hhCCHHHH----------HHHHHHHHHHhCCCCeEEE-e
Confidence 455678 899999888764321 22232211 1223333221 4689985 4
Q ss_pred CCCCCCHHHHHH---HHHcCCCEEEEccccccCCCHHHHHHHH
Q 021575 229 AGGVATPADAAM---MMQLGCDGVFVGSGVFKSGDPVKRAQAI 268 (310)
Q Consensus 229 ~GGI~t~~d~~~---~l~~GadgV~VGsai~~a~dp~~~a~~l 268 (310)
.|+.++.+-+.. +.++|||++++....|..++.....+-|
T Consensus 80 vg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f 122 (293)
T 1f6k_A 80 VGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYY 122 (293)
T ss_dssp CCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHH
Confidence 566544443322 3357999999999999766665554433
No 375
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=89.99 E-value=0.63 Score=43.38 Aligned_cols=74 Identities=18% Similarity=0.222 Sum_probs=51.3
Q ss_pred HHHHHHHHcCCcEEEeccCCcccc--------cccCCCC---C-CCCHHHHHHHHhhc--CcceeeccccCcHHHHHHHH
Q 021575 46 EQARVAEEAGACAVMALERVPADI--------RSQGGVA---R-MSDPQLIKEIKQSV--TIPVMAKARIGHFVEAQILE 111 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~--------~~~~G~~---~-~~~~~~i~~i~~~~--~iPv~vk~~~~~~~~a~~~~ 111 (310)
+.|+.++++|+++|+..|...... ...+|-+ . ....+.++++++.+ ++||+....+...+++..+.
T Consensus 238 ~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l 317 (367)
T 3zwt_A 238 DIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKI 317 (367)
T ss_dssp HHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHH
Confidence 578899999999996555211000 0111111 0 01247888899988 89999988887778998888
Q ss_pred HcCCCEEE
Q 021575 112 AIGIDYVD 119 (310)
Q Consensus 112 ~aGad~Vi 119 (310)
++|||.|-
T Consensus 318 ~~GAd~V~ 325 (367)
T 3zwt_A 318 RAGASLVQ 325 (367)
T ss_dssp HHTCSEEE
T ss_pred HcCCCEEE
Confidence 99999994
No 376
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=89.88 E-value=2.9 Score=37.93 Aligned_cols=87 Identities=18% Similarity=0.259 Sum_probs=51.2
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAA 229 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~ 229 (310)
+....+.|++.+.+.|.++-. .+++.++- .++++.+.+. .++||++ ..
T Consensus 49 i~~li~~Gv~Gl~v~GtTGE~-------------------~~Ls~~Er----------~~v~~~~v~~~~grvpVia-Gv 98 (315)
T 3si9_A 49 VEWQITQGINGVSPVGTTGES-------------------PTLTHEEH----------KRIIELCVEQVAKRVPVVA-GA 98 (315)
T ss_dssp HHHHHHTTCSEEECSSTTTTG-------------------GGSCHHHH----------HHHHHHHHHHHTTSSCBEE-EC
T ss_pred HHHHHHcCCCEEEeCccccCc-------------------cccCHHHH----------HHHHHHHHHHhCCCCcEEE-eC
Confidence 445678899999888765422 22232211 1223333222 4689985 45
Q ss_pred CCCCCHHHHH---HHHHcCCCEEEEccccccCCCHHHHHHHH
Q 021575 230 GGVATPADAA---MMMQLGCDGVFVGSGVFKSGDPVKRAQAI 268 (310)
Q Consensus 230 GGI~t~~d~~---~~l~~GadgV~VGsai~~a~dp~~~a~~l 268 (310)
|+-++.+.+. .+.++|||++++....|..+++....+-|
T Consensus 99 g~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f 140 (315)
T 3si9_A 99 GSNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHF 140 (315)
T ss_dssp CCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHH
Confidence 5554443333 23368999999999998767665555433
No 377
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=89.73 E-value=1 Score=41.09 Aligned_cols=91 Identities=15% Similarity=0.099 Sum_probs=51.2
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCC--C-CCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEE-eC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGV--A-RMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVD-ES 121 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~--~-~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi-~~ 121 (310)
+.|+.+.+.||+.| +++...+......=+ - ..+....++.+++.+++|+.+..+ ..+.++.+.++|++.|- .+
T Consensus 37 ~~a~~~v~~GAdII-DIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~vpiSIDT~--~~~Va~aAl~aGa~iINDVs 113 (314)
T 2vef_A 37 QQARKLIAEGASML-DIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESDVLISIDTW--KSQVAEAALAAGADLVNDIT 113 (314)
T ss_dssp HHHHHHHHTTCSEE-EEECCC-----CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECS--CHHHHHHHHHTTCCEEEETT
T ss_pred HHHHHHHHCCCCEE-EECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCCceEEEeCC--CHHHHHHHHHcCCCEEEECC
Confidence 56889999999965 775221111000000 0 001123445566667899998665 34778999999999994 33
Q ss_pred CCCCchhHHHHHHhcCCC
Q 021575 122 EVLTPADEENHINKHNFR 139 (310)
Q Consensus 122 ~~~~~~~~~~~i~~~~~~ 139 (310)
.....+++.+.+.+++..
T Consensus 114 g~~~d~~m~~v~a~~~~~ 131 (314)
T 2vef_A 114 GLMGDEKMPHVVAEARAQ 131 (314)
T ss_dssp TTCSCTTHHHHHHHHTCE
T ss_pred CCCCChHHHHHHHHcCCC
Confidence 322224555555554433
No 378
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=89.67 E-value=2.6 Score=37.88 Aligned_cols=49 Identities=24% Similarity=0.342 Sum_probs=32.2
Q ss_pred CCCCEEEeCCCCCCCHHHHHH---HHHcCCCEEEEccccccCCCHHHHHHHHH
Q 021575 220 GRLPVVHFAAGGVATPADAAM---MMQLGCDGVFVGSGVFKSGDPVKRAQAIV 269 (310)
Q Consensus 220 ~~iPVi~iA~GGI~t~~d~~~---~l~~GadgV~VGsai~~a~dp~~~a~~l~ 269 (310)
.++||++ ..|+.++.+-+.. +.++|||++++....|..++.....+-|.
T Consensus 68 grvpvia-Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~ 119 (297)
T 2rfg_A 68 GRVPVIA-GAGSNNPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFK 119 (297)
T ss_dssp TSSCBEE-ECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHH
T ss_pred CCCeEEE-ccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHH
Confidence 4689985 4566544443322 33579999999999997666655554333
No 379
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=89.64 E-value=2.3 Score=38.08 Aligned_cols=87 Identities=25% Similarity=0.331 Sum_probs=51.3
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAA 229 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~ 229 (310)
+....+.|++.+.+.|.++-. .+++.++- .++++.+.+. .++||++ ..
T Consensus 27 v~~li~~Gv~gl~~~GttGE~-------------------~~Ls~~Er----------~~v~~~~~~~~~gr~pvia-Gv 76 (292)
T 2vc6_A 27 VEWQIEEGSFGLVPCGTTGES-------------------PTLSKSEH----------EQVVEITIKTANGRVPVIA-GA 76 (292)
T ss_dssp HHHHHHTTCSEEETTSGGGTG-------------------GGSCHHHH----------HHHHHHHHHHHTTSSCBEE-EC
T ss_pred HHHHHHcCCCEEEECccccCh-------------------hhCCHHHH----------HHHHHHHHHHhCCCCcEEE-ec
Confidence 455677899999888764322 22232211 1223333222 4689985 45
Q ss_pred CCCCCHHHHHH---HHHcCCCEEEEccccccCCCHHHHHHHH
Q 021575 230 GGVATPADAAM---MMQLGCDGVFVGSGVFKSGDPVKRAQAI 268 (310)
Q Consensus 230 GGI~t~~d~~~---~l~~GadgV~VGsai~~a~dp~~~a~~l 268 (310)
|+-++.+-+.. +.++|||++++....+..+++....+-|
T Consensus 77 g~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f 118 (292)
T 2vc6_A 77 GSNSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHF 118 (292)
T ss_dssp CCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHH
Confidence 66554443333 3357999999999999767666555433
No 380
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=89.63 E-value=3.3 Score=37.19 Aligned_cols=89 Identities=17% Similarity=0.257 Sum_probs=51.8
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--C-CCCEEEeC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--G-RLPVVHFA 228 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~-~iPVi~iA 228 (310)
+....+.|++.+.+.|.++-. .+++.++- .++++.+.+. . ++||++ .
T Consensus 34 v~~li~~Gv~gl~v~GttGE~-------------------~~Ls~~Er----------~~v~~~~~~~~~g~rvpvia-G 83 (301)
T 3m5v_A 34 IKRQIENGIDAVVPVGTTGES-------------------ATLTHEEH----------RTCIEIAVETCKGTKVKVLA-G 83 (301)
T ss_dssp HHHHHHTTCCEEECSSTTTTG-------------------GGSCHHHH----------HHHHHHHHHHHTTSSCEEEE-E
T ss_pred HHHHHHcCCCEEEECccccCh-------------------hhCCHHHH----------HHHHHHHHHHhCCCCCeEEE-e
Confidence 455678899999988765422 22222211 1223333222 3 689985 4
Q ss_pred CCCCCCHHHHH---HHHHcCCCEEEEccccccCCCHHHHHHHHHH
Q 021575 229 AGGVATPADAA---MMMQLGCDGVFVGSGVFKSGDPVKRAQAIVR 270 (310)
Q Consensus 229 ~GGI~t~~d~~---~~l~~GadgV~VGsai~~a~dp~~~a~~l~~ 270 (310)
.|+-++.+.+. .+.++|||++++....+-.+++....+-|..
T Consensus 84 vg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ 128 (301)
T 3m5v_A 84 AGSNATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKA 128 (301)
T ss_dssp CCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHH
Confidence 55554443333 2335799999999999876766555543333
No 381
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=89.52 E-value=0.7 Score=43.19 Aligned_cols=73 Identities=16% Similarity=0.138 Sum_probs=52.5
Q ss_pred CCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEE
Q 021575 42 VVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVD 119 (310)
Q Consensus 42 ~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi 119 (310)
+.+++.|+.+.++|+++|+.-|... +...+ ...+.+.+.++++.++.||++...+...+++..+.++|||+|.
T Consensus 233 v~t~e~a~~a~~aGad~I~vs~~gg---~~~d~--~~~~~~~l~~v~~~~~~pVia~GGI~~~~dv~kal~~GAdaV~ 305 (380)
T 1p4c_A 233 LLSAEDADRCIAEGADGVILSNHGG---RQLDC--AISPMEVLAQSVAKTGKPVLIDSGFRRGSDIVKALALGAEAVL 305 (380)
T ss_dssp ECCHHHHHHHHHTTCSEEEECCGGG---TSCTT--CCCGGGTHHHHHHHHCSCEEECSSCCSHHHHHHHHHTTCSCEE
T ss_pred cCcHHHHHHHHHcCCCEEEEcCCCC---CcCCC--CcCHHHHHHHHHHHcCCeEEEECCCCCHHHHHHHHHhCCcHhh
Confidence 5678999999999999983212000 00000 1234678888888888899998877777788888889999995
No 382
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=89.31 E-value=2.9 Score=37.91 Aligned_cols=89 Identities=21% Similarity=0.234 Sum_probs=51.7
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAA 229 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~ 229 (310)
+....+.|++.+.+.|.++-. .+++.++- .++++.+.+. .++||++ ..
T Consensus 51 v~~li~~Gv~Gi~v~GtTGE~-------------------~~Ls~~Er----------~~v~~~~v~~~~grvpVia-Gv 100 (315)
T 3na8_A 51 IERLIDGGVHAIAPLGSTGEG-------------------AYLSDPEW----------DEVVDFTLKTVAHRVPTIV-SV 100 (315)
T ss_dssp HHHHHHTTCSEEECSSGGGTG-------------------GGSCHHHH----------HHHHHHHHHHHTTSSCBEE-EC
T ss_pred HHHHHHcCCCEEEECccccCh-------------------hhCCHHHH----------HHHHHHHHHHhCCCCcEEE-ec
Confidence 445678899999888764321 22232211 2233333222 4699985 44
Q ss_pred CCCCCHHHHH---HHHHcCCCEEEEccccccCCCHHHHHHHHHH
Q 021575 230 GGVATPADAA---MMMQLGCDGVFVGSGVFKSGDPVKRAQAIVR 270 (310)
Q Consensus 230 GGI~t~~d~~---~~l~~GadgV~VGsai~~a~dp~~~a~~l~~ 270 (310)
|+-++.+.+. .+.++|||++++....|-.+++....+-|..
T Consensus 101 g~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ 144 (315)
T 3na8_A 101 SDLTTAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRA 144 (315)
T ss_dssp CCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHH
Confidence 5554433333 2336899999999999887776655543333
No 383
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=89.13 E-value=2 Score=38.29 Aligned_cols=115 Identities=14% Similarity=0.148 Sum_probs=58.3
Q ss_pred HHHHHHHcCCcEEEeccCCcccccccCCCCC-CCCHHHHHHHHhhc-Ccceeecccc----C----c----HHHHHHHHH
Q 021575 47 QARVAEEAGACAVMALERVPADIRSQGGVAR-MSDPQLIKEIKQSV-TIPVMAKARI----G----H----FVEAQILEA 112 (310)
Q Consensus 47 ~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~-~~~~~~i~~i~~~~-~iPv~vk~~~----~----~----~~~a~~~~~ 112 (310)
.++.+.+.|+|.+ ++. .+.+..... ....+.+..+++.+ ++|+++-.|. | . .+..+.+.+
T Consensus 57 ~~~~~~~~gaD~V-ElR-----vD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~ll~~~l~ 130 (276)
T 3o1n_A 57 EALAYREADFDIL-EWR-----VDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYIDLNRAAVD 130 (276)
T ss_dssp HHHHHTTSCCSEE-EEE-----GGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCCCHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCCEE-EEE-----eccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCCCHHHHHHHHHHHHh
Confidence 3445556899977 542 111110000 00134556667776 8999985443 1 1 233455566
Q ss_pred cC-CCEEEeCCCCCchhHHHHHHh-cCCCCcEEEecCCH------HHH----HHHHHhCCCEEEEcC
Q 021575 113 IG-IDYVDESEVLTPADEENHINK-HNFRIPFVCGCRNL------GEA----LRRIREGAAMIRTKG 167 (310)
Q Consensus 113 aG-ad~Vi~~~~~~~~~~~~~i~~-~~~~i~~~v~~~t~------~ea----~~~~~~Gad~V~v~g 167 (310)
.| +|+|..-.......+.+.++. +..+..++++.|++ ++. .++.+.|||++++-.
T Consensus 131 ~g~~dyIDvEl~~~~~~~~~l~~~a~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~GaDIvKia~ 197 (276)
T 3o1n_A 131 SGLVDMIDLELFTGDDEVKATVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAV 197 (276)
T ss_dssp HTCCSEEEEEGGGCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred cCCCCEEEEECcCCHHHHHHHHHHHHhCCCEEEEEeecCCCCcCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 78 999953222222222333321 23456666665532 232 234467999988653
No 384
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=89.08 E-value=2 Score=38.97 Aligned_cols=47 Identities=19% Similarity=0.193 Sum_probs=31.9
Q ss_pred CCCCEEEeCCCCCCCHHHHHHH---HHcCCCEEEEccccccCCCHHHHHHHH
Q 021575 220 GRLPVVHFAAGGVATPADAAMM---MQLGCDGVFVGSGVFKSGDPVKRAQAI 268 (310)
Q Consensus 220 ~~iPVi~iA~GGI~t~~d~~~~---l~~GadgV~VGsai~~a~dp~~~a~~l 268 (310)
.++||++ ..|+ ++.+.+..+ .++|||++++....|..+++....+-|
T Consensus 80 grvpVia-Gvg~-st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f 129 (314)
T 3d0c_A 80 GRATVVA-GIGY-SVDTAIELGKSAIDSGADCVMIHQPVHPYITDAGAVEYY 129 (314)
T ss_dssp TSSEEEE-EECS-SHHHHHHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHH
T ss_pred CCCeEEe-cCCc-CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHH
Confidence 4689985 4566 554444333 357999999999999767765555433
No 385
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=89.07 E-value=4.4 Score=37.58 Aligned_cols=43 Identities=9% Similarity=-0.071 Sum_probs=36.1
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEcc
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGS 253 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGs 253 (310)
+++..+++++.+++||+ +.+.+.+++++.++++.| +|.|++--
T Consensus 247 d~~~~~~l~~~~~iPI~--~dE~~~~~~~~~~~i~~~~~d~v~ik~ 290 (388)
T 2nql_A 247 DIAGLEKVSKNTDVPIA--VGEEWRTHWDMRARIERCRIAIVQPEM 290 (388)
T ss_dssp CHHHHHHHHTSCCSCEE--ECTTCCSHHHHHHHHTTSCCSEECCCH
T ss_pred hHHHHHHHHhhCCCCEE--EeCCcCCHHHHHHHHHcCCCCEEEecC
Confidence 46778888888899998 789999999999999765 88888743
No 386
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=88.89 E-value=13 Score=33.54 Aligned_cols=195 Identities=18% Similarity=0.149 Sum_probs=112.8
Q ss_pred cCCCHHH----HHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccC-cHHHHHHHHHcCC
Q 021575 41 DVVTPEQ----ARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIG-HFVEAQILEAIGI 115 (310)
Q Consensus 41 ~~~~~~~----A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~-~~~~a~~~~~aGa 115 (310)
++.+.+. .+++++.+..-|+++.+. ..+ +.|. ......++...+ .++||.+..--+ .++.+..+.++|.
T Consensus 23 Nv~n~e~~~Ail~AAee~~sPvIlq~s~g--~~~-y~g~--~~~~~~v~~~a~-~~VPValHlDHg~~~e~~~~ai~~GF 96 (305)
T 1rvg_A 23 NVNNMEFLQAVLEAAEEQRSPVILALSEG--AMK-YGGR--ALTLMAVELAKE-ARVPVAVHLDHGSSYESVLRALRAGF 96 (305)
T ss_dssp ECCSHHHHHHHHHHHHHTTCCEEEEEEHH--HHH-HHHH--HHHHHHHHHHHH-CSSCEEEEEEEECSHHHHHHHHHTTC
T ss_pred eeCCHHHHHHHHHHHHHhCCCEEEECChh--HHh-hCCH--HHHHHHHHHHHh-CCCcEEEECCCCCCHHHHHHHHHcCC
Confidence 4555654 445577788876666311 011 1110 001234555556 899999864333 5688899999999
Q ss_pred CEEE--eCCCCCch-------hHHHHHHhcCC------C----CcEE---Ee----cCCHHHHHHHH-HhCCCEEEEcCC
Q 021575 116 DYVD--ESEVLTPA-------DEENHINKHNF------R----IPFV---CG----CRNLGEALRRI-REGAAMIRTKGE 168 (310)
Q Consensus 116 d~Vi--~~~~~~~~-------~~~~~i~~~~~------~----i~~~---v~----~~t~~ea~~~~-~~Gad~V~v~g~ 168 (310)
+-|- .+. ++.+ ++.++..+.+. | ..-. .+ .++++++.+-. +.|+|.+.+.-.
T Consensus 97 tSVMiDgS~-~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiG 175 (305)
T 1rvg_A 97 TSVMIDKSH-EDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMERTGADYLAVAIG 175 (305)
T ss_dssp SEEEECCTT-SCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCSCC------CCTTCCCHHHHHHHHHHHCCSEEEECSS
T ss_pred CeeeeCCCC-CCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCccCCccccccccccCCHHHHHHHHHHHCCCEEEEecC
Confidence 9993 333 2322 33344433321 1 1101 00 26788888866 579998876421
Q ss_pred CCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCC------------------
Q 021575 169 AGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAG------------------ 230 (310)
Q Consensus 169 ~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~G------------------ 230 (310)
+--| .++.. ....-+++.++++++..++|++.=.+.
T Consensus 176 t~HG-----------------~Yk~~---------g~p~L~~~~L~~I~~~~~vpLVlHGgSsv~~~~~~~~~~~gg~~~ 229 (305)
T 1rvg_A 176 TSHG-----------------AYKGK---------GRPFIDHARLERIARLVPAPLVLHGASAVPPELVERFRASGGEIG 229 (305)
T ss_dssp CCSS-----------------SBCSS---------SSCCCCHHHHHHHHHHCCSCEEECSCCCCCHHHHHHHHHTTCCCC
T ss_pred cccc-----------------ccCCC---------CCCccCHHHHHHHHHhcCCCEEEeCCCCCcHHHHHHHHhhccccc
Confidence 1101 11100 012345788999988888998864555
Q ss_pred ---CCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhc
Q 021575 231 ---GVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTH 274 (310)
Q Consensus 231 ---GI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~ 274 (310)
|+ ..+++.++.+.|..=|=+++.+-. ...+.+++.+.+
T Consensus 230 ~~~G~-p~e~i~~ai~~GV~KiNi~Tdl~~-----A~~~~vr~~~~~ 270 (305)
T 1rvg_A 230 EAAGI-HPEDIKKAISLGIAKINTDTDLRL-----AFTALIREALNK 270 (305)
T ss_dssp SCBCC-CHHHHHHHHHTTEEEEEECHHHHH-----HHHHHHHHHHHH
T ss_pred cCCCC-CHHHHHHHHHCCCeEEEEChHHHH-----HHHHHHHHHHHh
Confidence 77 589999999999999999987763 344445555443
No 387
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=88.87 E-value=0.62 Score=44.15 Aligned_cols=74 Identities=22% Similarity=0.222 Sum_probs=51.7
Q ss_pred HHHHHHHHcCCcEEEeccCCcc--ccc----ccCC---CCC-CCCHHHHHHHHhhc--CcceeeccccCcHHHHHHHHHc
Q 021575 46 EQARVAEEAGACAVMALERVPA--DIR----SQGG---VAR-MSDPQLIKEIKQSV--TIPVMAKARIGHFVEAQILEAI 113 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~--~~~----~~~G---~~~-~~~~~~i~~i~~~~--~iPv~vk~~~~~~~~a~~~~~a 113 (310)
++|+.++++|+|+|+..|.... ++. ..+| ... ....+.++++++.+ ++||+....+...+++..+..+
T Consensus 287 ~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~a 366 (415)
T 3i65_A 287 EIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEA 366 (415)
T ss_dssp HHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHc
Confidence 6899999999999966662211 110 0121 111 11246888888888 7999998888778899888899
Q ss_pred CCCEEE
Q 021575 114 GIDYVD 119 (310)
Q Consensus 114 Gad~Vi 119 (310)
|||.|-
T Consensus 367 GAd~Vq 372 (415)
T 3i65_A 367 GASVCQ 372 (415)
T ss_dssp TEEEEE
T ss_pred CCCEEE
Confidence 999994
No 388
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=88.80 E-value=1.1 Score=40.46 Aligned_cols=83 Identities=11% Similarity=0.118 Sum_probs=49.0
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHH-------HHHHhhcCcceeeccccCcHHHHHHHHHcCCCEE
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLI-------KEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYV 118 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i-------~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~V 118 (310)
+.|+.+.+.||+.| +++...+.. |.......+.+ +.+++. ++|+.+..+ ..+.++.+.++|++.|
T Consensus 50 ~~a~~~v~~GAdiI-DIGgeSTrP----ga~~v~~~eE~~Rv~pvi~~l~~~-~vpiSIDT~--~~~Va~aAl~aGa~iI 121 (294)
T 2y5s_A 50 RRAERMIAEGADLL-DIGGESTRP----GAPPVPLDEELARVIPLVEALRPL-NVPLSIDTY--KPAVMRAALAAGADLI 121 (294)
T ss_dssp HHHHHHHHTTCSEE-EEESSCCST----TCCCCCHHHHHHHHHHHHHHHGGG-CSCEEEECC--CHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHCCCCEE-EECCCcCCC----CCCCCCHHHHHHHHHHHHHHHhhC-CCeEEEECC--CHHHHHHHHHcCCCEE
Confidence 57889999999965 776222111 11111112333 333443 899988665 3477889999999999
Q ss_pred E-eCCCCCchhHHHHHHhcC
Q 021575 119 D-ESEVLTPADEENHINKHN 137 (310)
Q Consensus 119 i-~~~~~~~~~~~~~i~~~~ 137 (310)
- .+.. ..++..+.+++++
T Consensus 122 NdVsg~-~d~~m~~~~a~~~ 140 (294)
T 2y5s_A 122 NDIWGF-RQPGAIDAVRDGN 140 (294)
T ss_dssp EETTTT-CSTTHHHHHSSSS
T ss_pred EECCCC-CchHHHHHHHHhC
Confidence 4 3332 2445666655443
No 389
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=88.77 E-value=3.9 Score=36.91 Aligned_cols=85 Identities=20% Similarity=0.099 Sum_probs=48.8
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAA 229 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~ 229 (310)
+....+.|++.+.+.|.++-. .+++.++- .++++.+.+. .++||++ ..
T Consensus 35 v~~li~~Gv~gl~v~GtTGE~-------------------~~Ls~~Er----------~~v~~~~~~~~~grvpvia-Gv 84 (309)
T 3fkr_A 35 VDFMIDAGSDGLCILANFSEQ-------------------FAITDDER----------DVLTRTILEHVAGRVPVIV-TT 84 (309)
T ss_dssp HHHHHHTTCSCEEESSGGGTG-------------------GGSCHHHH----------HHHHHHHHHHHTTSSCEEE-EC
T ss_pred HHHHHHcCCCEEEECccccCc-------------------ccCCHHHH----------HHHHHHHHHHhCCCCcEEE-ec
Confidence 445678899999888764421 22232211 1223333222 4799985 45
Q ss_pred CCCCCHHHHH---HHHHcCCCEEEEccccc---cCCCHHHHHH
Q 021575 230 GGVATPADAA---MMMQLGCDGVFVGSGVF---KSGDPVKRAQ 266 (310)
Q Consensus 230 GGI~t~~d~~---~~l~~GadgV~VGsai~---~a~dp~~~a~ 266 (310)
|+.++.+-+. .+.++|||++++....+ ..++.....+
T Consensus 85 g~~~t~~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~ 127 (309)
T 3fkr_A 85 SHYSTQVCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFE 127 (309)
T ss_dssp CCSSHHHHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHH
T ss_pred CCchHHHHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHH
Confidence 6654444333 23357999999999987 3345555444
No 390
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=88.72 E-value=2.7 Score=36.82 Aligned_cols=114 Identities=20% Similarity=0.175 Sum_probs=60.5
Q ss_pred HHHHHHHHHcCCcEE-Eecc-CCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccc---------cCc--HHHH-HHH
Q 021575 45 PEQARVAEEAGACAV-MALE-RVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKAR---------IGH--FVEA-QIL 110 (310)
Q Consensus 45 ~~~A~~~~~~Ga~~i-~~L~-~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~---------~~~--~~~a-~~~ 110 (310)
.+.++.+.++|++.+ ++++ ..+.. .. .......+.+.++.+++|+++... ... .+.+ +.+
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~-~~-----~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a 175 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDED-WE-----AYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLG 175 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTH-HH-----HHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCH-HH-----HHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHH
Confidence 467888889999987 3443 11000 00 000122333334456899887531 111 1233 778
Q ss_pred HHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEE--ecC--CHHH----HHHHHHhCCCEEEEc
Q 021575 111 EAIGIDYVDESEVLTPADEENHINKHNFRIPFVC--GCR--NLGE----ALRRIREGAAMIRTK 166 (310)
Q Consensus 111 ~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v--~~~--t~~e----a~~~~~~Gad~V~v~ 166 (310)
.++|+|+|.......+..+.+..+. .++++++ +++ +.++ +..+.+.|++.+.+.
T Consensus 176 ~~~Gad~i~~~~~~~~~~l~~i~~~--~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg 237 (273)
T 2qjg_A 176 AELGADIVKTSYTGDIDSFRDVVKG--CPAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVG 237 (273)
T ss_dssp HHTTCSEEEECCCSSHHHHHHHHHH--CSSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECC
T ss_pred HHcCCCEEEECCCCCHHHHHHHHHh--CCCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEee
Confidence 8999999854433333333333322 2445443 355 4666 444557899988763
No 391
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=88.70 E-value=13 Score=33.42 Aligned_cols=163 Identities=14% Similarity=0.074 Sum_probs=85.7
Q ss_pred HHHHHHHHcCCCEEE--eCC----CCCchhH---HHHHHhc-CCCCcEEEec-CCHHHH----HHHHHhCCCEEEEcCCC
Q 021575 105 VEAQILEAIGIDYVD--ESE----VLTPADE---ENHINKH-NFRIPFVCGC-RNLGEA----LRRIREGAAMIRTKGEA 169 (310)
Q Consensus 105 ~~a~~~~~aGad~Vi--~~~----~~~~~~~---~~~i~~~-~~~i~~~v~~-~t~~ea----~~~~~~Gad~V~v~g~~ 169 (310)
..++-+.+.|+|+++ ++- .++.+|- .+...+. .-.+++++++ .+.+++ +.+.++|+|.+.+..+.
T Consensus 37 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P~ 116 (316)
T 3e96_A 37 ETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGADAVMIHMPI 116 (316)
T ss_dssp HHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 445667789999995 322 2444433 3333332 2235555542 355554 44567899998876554
Q ss_pred C-CcchHHHHHHHHhhccc----eEeec---ccChhHHHHhh--------hccCCcHHHHHHHhhcC---CCC-EEEeCC
Q 021575 170 G-TGNIIEAVRHVRSVMGD----IRVLR---NMDDDEVFTFA--------KKIAAPYDLVMQTKQLG---RLP-VVHFAA 229 (310)
Q Consensus 170 ~-~~~~~~~~~~~r~~~~~----~~~l~---~~~~d~~~~~~--------~~~~~~~~~i~~i~~~~---~iP-Vi~iA~ 229 (310)
+ ..+-....++.+..... +-++. .++++.+.+.+ |+...+...+.++.+.. +.. ++
T Consensus 117 y~~~s~~~l~~~f~~va~a~~lPiilYn~g~~l~~~~~~~La~~pnIvgiKdssgd~~~~~~~~~~~~~~~f~~v~---- 192 (316)
T 3e96_A 117 HPYVTAGGVYAYFRDIIEALDFPSLVYFKDPEISDRVLVDLAPLQNLVGVKYAINDLPRFAKVVRSIPEEHQIAWI---- 192 (316)
T ss_dssp CSCCCHHHHHHHHHHHHHHHTSCEEEEECCTTSCTHHHHHHTTCTTEEEEEECCCCHHHHHHHHTTSCGGGCCEEE----
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHhcCCCCceEEE----
Confidence 3 22323555666554332 33333 34554443322 33344555555555432 233 43
Q ss_pred CCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhccC
Q 021575 230 GGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHYS 276 (310)
Q Consensus 230 GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~~ 276 (310)
.|- +..-+..++..|++|++-+.+-+- |.... ++.++++++.
T Consensus 193 ~G~-d~~~~~~~l~~G~~G~is~~an~~---P~~~~-~l~~a~~~Gd 234 (316)
T 3e96_A 193 CGT-AEKWAPFFWHAGAKGFTSGLVNLL---PQKAV-EMLEALRNND 234 (316)
T ss_dssp ETT-CTTTHHHHHHHTCCEEEESGGGTC---HHHHH-HHHHHHHTTC
T ss_pred eCC-hHHHHHHHHHCCCCEEEechhhhh---HHHHH-HHHHHHHcCC
Confidence 343 112244557889999999887663 54433 3666665543
No 392
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=88.65 E-value=4.8 Score=30.43 Aligned_cols=61 Identities=15% Similarity=0.235 Sum_probs=41.8
Q ss_pred HHHHHHHhhc---CCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhccCC
Q 021575 210 YDLVMQTKQL---GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHYSD 277 (310)
Q Consensus 210 ~~~i~~i~~~---~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~~~ 277 (310)
+++++.+++. .++|++++ .+-.+.+...++++.|+++++ .+.-++....+.+...++.+..
T Consensus 78 ~~~~~~l~~~~~~~~~~ii~~--t~~~~~~~~~~~~~~g~~~~l-----~kP~~~~~l~~~i~~~~~~~~~ 141 (149)
T 1k66_A 78 REVLQEIKQDEVLKKIPVVIM--TTSSNPKDIEICYSYSISSYI-----VKPLEIDRLTETVQTFIKYWLD 141 (149)
T ss_dssp HHHHHHHTTSTTGGGSCEEEE--ESCCCHHHHHHHHHTTCSEEE-----ECCSSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCcccCCCeEEEE--eCCCCHHHHHHHHHCCCCEEE-----eCCCCHHHHHHHHHHHHHHhhh
Confidence 5667777664 46899865 444578899999999999986 4444566666656666555443
No 393
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=88.49 E-value=4.1 Score=36.31 Aligned_cols=167 Identities=10% Similarity=0.025 Sum_probs=88.8
Q ss_pred HHHHHHHHcCCcEEEecc-CCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEEe---C
Q 021575 46 EQARVAEEAGACAVMALE-RVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDE---S 121 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~-~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi~---~ 121 (310)
+.++++.+.|.+.| ..- +.. .+.... +....+.++.+++..++|+.+-. ...+.++.+.++|++.|-. .
T Consensus 30 ~i~~~L~~~Gv~~I-E~g~~~~--~~~~p~--~~~~~e~~~~i~~~~~~~v~~l~--~n~~~i~~a~~~G~~~V~i~~~~ 102 (295)
T 1ydn_A 30 ALINRLSDCGYARI-EATSFVS--PKWVPQ--LADSREVMAGIRRADGVRYSVLV--PNMKGYEAAAAAHADEIAVFISA 102 (295)
T ss_dssp HHHHHHTTTTCSEE-EEEECSC--TTTCGG--GTTHHHHHHHSCCCSSSEEEEEC--SSHHHHHHHHHTTCSEEEEEEES
T ss_pred HHHHHHHHcCcCEE-EEccCcC--cccccc--ccCHHHHHHHHHhCCCCEEEEEe--CCHHHHHHHHHCCCCEEEEEEec
Confidence 46888889999976 331 110 010000 01123555666554467775544 2357788999999999831 2
Q ss_pred C--------CCCch-------hHHHHHHhcCCCCcEEE---------ecCCHHHHHHH----HHhCCCEEEEcCCCCCcc
Q 021575 122 E--------VLTPA-------DEENHINKHNFRIPFVC---------GCRNLGEALRR----IREGAAMIRTKGEAGTGN 173 (310)
Q Consensus 122 ~--------~~~~~-------~~~~~i~~~~~~i~~~v---------~~~t~~ea~~~----~~~Gad~V~v~g~~~~~~ 173 (310)
+ ..+.. +.++.+++.+..+...+ +-.+++++.+. .+.|+|.+.+.-..+..
T Consensus 103 S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~~- 181 (295)
T 1ydn_A 103 SEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLGDTIGRG- 181 (295)
T ss_dssp CHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEEETTSCC-
T ss_pred CHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEecCCCCCc-
Confidence 2 12222 22333333333222111 12355555443 35788877654221111
Q ss_pred hHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCC-CCEEEeC--CCCCCCHHHHHHHHHcCCCEEE
Q 021575 174 IIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGR-LPVVHFA--AGGVATPADAAMMMQLGCDGVF 250 (310)
Q Consensus 174 ~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~-iPVi~iA--~GGI~t~~d~~~~l~~GadgV~ 250 (310)
.|+ ...++++.+++..+ +|+.+=. ..|. ...+..+++++|++-|-
T Consensus 182 ---------------------~P~----------~~~~lv~~l~~~~~~~~l~~H~Hn~~Gl-a~an~l~Ai~aG~~~vd 229 (295)
T 1ydn_A 182 ---------------------TPD----------TVAAMLDAVLAIAPAHSLAGHYHDTGGR-ALDNIRVSLEKGLRVFD 229 (295)
T ss_dssp ---------------------CHH----------HHHHHHHHHHTTSCGGGEEEEEBCTTSC-HHHHHHHHHHHTCCEEE
T ss_pred ---------------------CHH----------HHHHHHHHHHHhCCCCeEEEEECCCcch-HHHHHHHHHHhCCCEEE
Confidence 111 11456777776654 6765323 5677 46788888999999877
Q ss_pred Ec
Q 021575 251 VG 252 (310)
Q Consensus 251 VG 252 (310)
+.
T Consensus 230 ~s 231 (295)
T 1ydn_A 230 AS 231 (295)
T ss_dssp EB
T ss_pred ec
Confidence 53
No 394
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=88.35 E-value=0.77 Score=41.12 Aligned_cols=75 Identities=21% Similarity=0.282 Sum_probs=49.5
Q ss_pred HHHHHHHHHcCCcEEEeccCC-----ccccc---------ccCCCCCC-CCHHHHHHHHhhcCcceeeccccCcHHHHHH
Q 021575 45 PEQARVAEEAGACAVMALERV-----PADIR---------SQGGVARM-SDPQLIKEIKQSVTIPVMAKARIGHFVEAQI 109 (310)
Q Consensus 45 ~~~A~~~~~~Ga~~i~~L~~~-----~~~~~---------~~~G~~~~-~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~ 109 (310)
.+.++.++++|+++|...|.. ....+ ...|.... ...+.++++++.+++||++...+...+++..
T Consensus 179 ~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvia~GGI~~~~d~~~ 258 (311)
T 1ep3_A 179 VPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIGMGGVANAQDVLE 258 (311)
T ss_dssp HHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEECSSCCSHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHH
Confidence 467999999999998332200 00000 00111000 0136788888889999999888777788888
Q ss_pred HHHcCCCEEE
Q 021575 110 LEAIGIDYVD 119 (310)
Q Consensus 110 ~~~aGad~Vi 119 (310)
+.++|||.|.
T Consensus 259 ~l~~GAd~V~ 268 (311)
T 1ep3_A 259 MYMAGASAVA 268 (311)
T ss_dssp HHHHTCSEEE
T ss_pred HHHcCCCEEE
Confidence 8889999995
No 395
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=88.33 E-value=14 Score=35.17 Aligned_cols=81 Identities=12% Similarity=-0.025 Sum_probs=52.2
Q ss_pred HHHHHHHhhcC-CCC-EEEeCCC--CCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhccCChhhhhhhh
Q 021575 210 YDLVMQTKQLG-RLP-VVHFAAG--GVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHYSDPEVLAEVS 285 (310)
Q Consensus 210 ~~~i~~i~~~~-~iP-Vi~iA~G--GI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~~~~~~~~~~~ 285 (310)
++.++.+++.. +.| ++.=+.+ |+ +.+++.++.+.|..-+=||+.++-+ -......|...=++...+.....+.
T Consensus 244 ~e~~~~L~~~v~~~P~LVlhghStDy~-~~e~l~~~V~~GiaklNVgp~Lt~a--~reAl~aL~~ie~~l~~~~~~s~l~ 320 (450)
T 3txv_A 244 RARAEKLSATLGQLHGMVFEAHSTDYQ-TPDALRELVADGFAILKVGPGLTFA--LREALYGLDQIAAFLFPAARERTLA 320 (450)
T ss_dssp TTTTSHHHHGGGTSTTCEEEESCCTTC-CHHHHHHHHHTTEEEEEECHHHHHH--HHHHHHHHHHHHHHHCTTSCSSCHH
T ss_pred HHHHHHHHHHhccCCCEEEecCCCCCC-CHHHHHHHHHcCCcEEEEChHHHHH--HHHHHHHHHHHHHHHcccCCcccHH
Confidence 44556666655 678 6632344 55 7899999999999999999999852 1223333333333344445556778
Q ss_pred hhcccchh
Q 021575 286 CGLGEAMV 293 (310)
Q Consensus 286 ~~~~~~~~ 293 (310)
+.+.+.|.
T Consensus 321 ~~l~~~m~ 328 (450)
T 3txv_A 321 EVTEAVMR 328 (450)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88887775
No 396
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=88.29 E-value=1.6 Score=37.51 Aligned_cols=64 Identities=23% Similarity=0.251 Sum_probs=46.9
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhc--CcceeeccccCcHHHHHHHHHcCCCEE
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSV--TIPVMAKARIGHFVEAQILEAIGIDYV 118 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~--~iPv~vk~~~~~~~~a~~~~~aGad~V 118 (310)
+.++.++++|+|+| ..+. . ...+| .+.+.++.+++.+ ++||++...+...+++..+.++|||.|
T Consensus 136 ~~a~~a~eaGad~I-~tst---g-~~~gg----a~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~i 201 (225)
T 1mzh_A 136 KAVEICIEAGADFI-KTST---G-FAPRG----TTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRI 201 (225)
T ss_dssp HHHHHHHHHTCSEE-ECCC---S-CSSSC----CCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhCCCEE-EECC---C-CCCCC----CCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHH
Confidence 56888899999987 4321 0 00122 2478889998876 799999877777788888889999976
No 397
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=88.27 E-value=5.8 Score=37.51 Aligned_cols=49 Identities=10% Similarity=-0.143 Sum_probs=38.0
Q ss_pred CcHHHHHHHhhcCCCC-EEE--eCCCCCCCHHHHHHHHHcCCCEEEEcccccc
Q 021575 208 APYDLVMQTKQLGRLP-VVH--FAAGGVATPADAAMMMQLGCDGVFVGSGVFK 257 (310)
Q Consensus 208 ~~~~~i~~i~~~~~iP-Vi~--iA~GGI~t~~d~~~~l~~GadgV~VGsai~~ 257 (310)
.+++.+++|++.+++| ++. =.+.|+ +.+++.++.+.|..-+=||+.+..
T Consensus 235 ld~e~l~~I~~~v~~P~LVle~HGgSg~-~~e~l~~~v~~Gi~kiNV~t~l~~ 286 (420)
T 2fiq_A 235 YQPQEAQALAQWIENTRMVYEAHSTDYQ-TRTAYWELVRDHFAILKVGPALTF 286 (420)
T ss_dssp CCGGGGHHHHHHHTTSSCEEEESCCTTC-CHHHHHHHHHTTEEEEEECHHHHH
T ss_pred cCHHHHHHHHHhcCCCCEEEecCCCCCC-CHHHHHHHHHcCCCEEEECHHHHH
Confidence 3466777787777789 663 245666 689999999999999999998874
No 398
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=88.19 E-value=4.6 Score=37.44 Aligned_cols=46 Identities=20% Similarity=0.154 Sum_probs=38.3
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccc
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVF 256 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~ 256 (310)
+++.++++++.+++||+ +.+.+.++.++.++++.| +|.|++--.-+
T Consensus 225 ~~~~~~~l~~~~~iPIa--~dE~~~~~~~~~~~l~~~~~d~v~ik~~~~ 271 (378)
T 3eez_A 225 TLDDIAAIRPLHSAPVS--VDECLVTLQDAARVARDGLAEVFGIKLNRV 271 (378)
T ss_dssp SHHHHHHTGGGCCCCEE--ECTTCCSHHHHHHHHHTTCCSEEEEEHHHH
T ss_pred CHHHHHHHHhhCCCCEE--ECCCCCCHHHHHHHHHcCCCCEEEeCchhc
Confidence 57778888888899998 788999999999999875 89998875544
No 399
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=88.08 E-value=1.1 Score=40.83 Aligned_cols=76 Identities=14% Similarity=0.176 Sum_probs=50.8
Q ss_pred CCHHHHHHHHHcCCcEEEec-c--CCc----cccccc-----C--CCCCCCCHHHHHHHHhhc-CcceeeccccCcHHHH
Q 021575 43 VTPEQARVAEEAGACAVMAL-E--RVP----ADIRSQ-----G--GVARMSDPQLIKEIKQSV-TIPVMAKARIGHFVEA 107 (310)
Q Consensus 43 ~~~~~A~~~~~~Ga~~i~~L-~--~~~----~~~~~~-----~--G~~~~~~~~~i~~i~~~~-~iPv~vk~~~~~~~~a 107 (310)
.+++.|+.+.++|+|+| .+ | ... ...+.. . ...-....+.+.++++.+ ++||++...+...+++
T Consensus 193 ~~~e~a~~~~~~G~d~I-~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~ 271 (332)
T 1vcf_A 193 LSREAALALRDLPLAAV-DVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVASGGVYTGTDG 271 (332)
T ss_dssp CCHHHHHHHTTSCCSEE-ECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCSSSCEEEESSCCSHHHH
T ss_pred CCHHHHHHHHHcCCCEE-EeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcCCCeEEEECCCCCHHHH
Confidence 57889999999999998 43 2 100 000100 0 000123356778888888 7999998777777888
Q ss_pred HHHHHcCCCEEE
Q 021575 108 QILEAIGIDYVD 119 (310)
Q Consensus 108 ~~~~~aGad~Vi 119 (310)
..+...|||.|-
T Consensus 272 ~kal~~GAd~V~ 283 (332)
T 1vcf_A 272 AKALALGADLLA 283 (332)
T ss_dssp HHHHHHTCSEEE
T ss_pred HHHHHhCCChHh
Confidence 888889999994
No 400
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=88.05 E-value=15 Score=33.13 Aligned_cols=82 Identities=15% Similarity=0.108 Sum_probs=45.2
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc---HHHHHHHHHcCCCE
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH---FVEAQILEAIGIDY 117 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~---~~~a~~~~~aGad~ 117 (310)
..+..+.+.|+++++.+. . .|-...+... +.++.+.+.+ .+||++...-+. .+.++.+.++|||+
T Consensus 37 ~lv~~li~~Gv~gl~v~G-t------TGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~Gada 109 (314)
T 3d0c_A 37 DNVEFLLQNGIEVIVPNG-N------TGEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSGADC 109 (314)
T ss_dssp HHHHHHHHTTCSEECTTS-G------GGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHcCCCEEEECc-c------cCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHcCCCE
Confidence 467777889999984331 1 1101012111 2333334433 589998765421 35567788899999
Q ss_pred EE-eCCC---CCchhHHHHHH
Q 021575 118 VD-ESEV---LTPADEENHIN 134 (310)
Q Consensus 118 Vi-~~~~---~~~~~~~~~i~ 134 (310)
++ .+.. .+..++.++.+
T Consensus 110 vlv~~P~y~~~s~~~l~~~f~ 130 (314)
T 3d0c_A 110 VMIHQPVHPYITDAGAVEYYR 130 (314)
T ss_dssp EEECCCCCSCCCHHHHHHHHH
T ss_pred EEECCCCCCCCCHHHHHHHHH
Confidence 96 3332 23445554443
No 401
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=87.95 E-value=1.3 Score=41.01 Aligned_cols=78 Identities=29% Similarity=0.368 Sum_probs=53.8
Q ss_pred ccccCCCHHHHHHHHHcCCcEEEec-cCCcccccccCCCCC---------CCCHHHHHHHHhhcCcceeeccccCcHHHH
Q 021575 38 VIMDVVTPEQARVAEEAGACAVMAL-ERVPADIRSQGGVAR---------MSDPQLIKEIKQSVTIPVMAKARIGHFVEA 107 (310)
Q Consensus 38 ~i~~~~~~~~A~~~~~~Ga~~i~~L-~~~~~~~~~~~G~~~---------~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a 107 (310)
++..+.+++.++.+.+.|+|.| .+ ++.. ....|... ....+.++++++.+++||++...+...+.+
T Consensus 148 v~~~v~t~~~a~~a~~~GaD~i-~v~g~~~---GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaaGGI~~~~~~ 223 (369)
T 3bw2_A 148 TLVTATTPEEARAVEAAGADAV-IAQGVEA---GGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVAAGGIMRGGQI 223 (369)
T ss_dssp EEEEESSHHHHHHHHHTTCSEE-EEECTTC---SEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEESSCCSHHHH
T ss_pred EEEECCCHHHHHHHHHcCCCEE-EEeCCCc---CCcCCCcccccccccccccHHHHHHHHHHhcCceEEEECCCCCHHHH
Confidence 3445678888999999999987 33 2110 00001110 112678888888889999998887666788
Q ss_pred HHHHHcCCCEEE
Q 021575 108 QILEAIGIDYVD 119 (310)
Q Consensus 108 ~~~~~aGad~Vi 119 (310)
..+.+.|||+|.
T Consensus 224 ~~~l~~GAd~V~ 235 (369)
T 3bw2_A 224 AAVLAAGADAAQ 235 (369)
T ss_dssp HHHHHTTCSEEE
T ss_pred HHHHHcCCCEEE
Confidence 888899999995
No 402
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=87.86 E-value=1.5 Score=40.32 Aligned_cols=83 Identities=18% Similarity=0.054 Sum_probs=52.9
Q ss_pred HHHHHHHHcCCcEEEecc-C-CcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcC-CCEEE-eC
Q 021575 46 EQARVAEEAGACAVMALE-R-VPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIG-IDYVD-ES 121 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~-~-~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aG-ad~Vi-~~ 121 (310)
++++.+++.|++.| ++- . .........+ ...+.+.++++++.+++||++...+...+.++.+.+.| +|.|- +.
T Consensus 243 ~la~~L~~~Gvd~i-~vs~g~~~~~~~~~~~--~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR 319 (349)
T 3hgj_A 243 AFARRLKELGVDLL-DCSSGGVVLRVRIPLA--PGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSADLVLLGR 319 (349)
T ss_dssp HHHHHHHHTTCCEE-EEECCCSCSSSCCCCC--TTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCSEEEEST
T ss_pred HHHHHHHHcCCCEE-EEecCCcCcccccCCC--ccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCceEEEecH
Confidence 56888999999987 331 1 0000000000 11246788999999999999988776668888888888 99994 33
Q ss_pred CCCCchhHHH
Q 021575 122 EVLTPADEEN 131 (310)
Q Consensus 122 ~~~~~~~~~~ 131 (310)
..+..+++..
T Consensus 320 ~~lanPdl~~ 329 (349)
T 3hgj_A 320 VLLRDPYFPL 329 (349)
T ss_dssp HHHHCTTHHH
T ss_pred HHHhCchHHH
Confidence 3333334433
No 403
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=87.74 E-value=0.22 Score=47.02 Aligned_cols=52 Identities=15% Similarity=0.086 Sum_probs=38.2
Q ss_pred HhhcCCCCEEEeCCCCCCCHHHHHHHH-HcCCCEEEEccccccCCCHHHHHHHHHHHHhccC
Q 021575 216 TKQLGRLPVVHFAAGGVATPADAAMMM-QLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHYS 276 (310)
Q Consensus 216 i~~~~~iPVi~iA~GGI~t~~d~~~~l-~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~~ 276 (310)
+++..++||+ +.||+.+..++.+.+ +-+||.|.+|++++. ||. |.+.++++.
T Consensus 313 ir~~~~~pvi--~~G~~~~~~~~~~~~~~~~aDlV~~gR~~ia--dPd-----l~~k~~~G~ 365 (400)
T 4gbu_A 313 VYSIWKGPVI--RAGNFALHPEVVREEVKDKRTLIGYGRFFIS--NPD-----LVDRLEKGL 365 (400)
T ss_dssp HHHHCCSCEE--EESSCTTCHHHHHHHTTSTTEEEECCHHHHH--CTT-----HHHHHHHTC
T ss_pred HHHHhCCCEE--EeCCCCChHHHHHHHHcCCCeEhHHHHHHHH--CcH-----HHHHHHcCC
Confidence 5555678998 579998777776666 557999999999998 665 444454443
No 404
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=87.69 E-value=1.7 Score=40.39 Aligned_cols=74 Identities=23% Similarity=0.240 Sum_probs=52.6
Q ss_pred cCCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhc--CcceeeccccCcHHHHHHHHHcCCCEE
Q 021575 41 DVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSV--TIPVMAKARIGHFVEAQILEAIGIDYV 118 (310)
Q Consensus 41 ~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~--~iPv~vk~~~~~~~~a~~~~~aGad~V 118 (310)
.+.+++.++.+.++|+++| .+..... +...+ .....+.+.++++.+ ++||+....+...+++..+.++|||.|
T Consensus 232 ~~~~~e~a~~a~~~Gad~I-~vs~~gg--r~~~~--~~~~~~~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~~GAdaV 306 (370)
T 1gox_A 232 GVITAEDARLAVQHGAAGI-IVSNHGA--RQLDY--VPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGV 306 (370)
T ss_dssp CCCSHHHHHHHHHTTCSEE-EECCGGG--TSSTT--CCCHHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEE
T ss_pred ecCCHHHHHHHHHcCCCEE-EECCCCC--ccCCC--cccHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHcCCCEE
Confidence 4567899999999999998 3321100 10111 123457788888877 799999887777778888888999999
Q ss_pred E
Q 021575 119 D 119 (310)
Q Consensus 119 i 119 (310)
.
T Consensus 307 ~ 307 (370)
T 1gox_A 307 F 307 (370)
T ss_dssp E
T ss_pred e
Confidence 5
No 405
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=87.69 E-value=0.99 Score=43.14 Aligned_cols=74 Identities=23% Similarity=0.265 Sum_probs=50.8
Q ss_pred HHHHHHHHcCCcEEEeccCCcc--ccc----ccCCCC----CCCCHHHHHHHHhhc--CcceeeccccCcHHHHHHHHHc
Q 021575 46 EQARVAEEAGACAVMALERVPA--DIR----SQGGVA----RMSDPQLIKEIKQSV--TIPVMAKARIGHFVEAQILEAI 113 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~--~~~----~~~G~~----~~~~~~~i~~i~~~~--~iPv~vk~~~~~~~~a~~~~~a 113 (310)
+.|+.++++|+|+|+.-|.... +.+ ..+|-+ .....+.++++++.+ ++||+....+...+++..+..+
T Consensus 315 ~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~a 394 (443)
T 1tv5_A 315 EIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEA 394 (443)
T ss_dssp HHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHc
Confidence 5799999999999855552110 100 011110 001246788888888 8999998888778899889999
Q ss_pred CCCEEE
Q 021575 114 GIDYVD 119 (310)
Q Consensus 114 Gad~Vi 119 (310)
|||.|-
T Consensus 395 GAd~Vq 400 (443)
T 1tv5_A 395 GASVCQ 400 (443)
T ss_dssp TEEEEE
T ss_pred CCCEEE
Confidence 999994
No 406
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=87.65 E-value=3.6 Score=38.27 Aligned_cols=42 Identities=7% Similarity=0.012 Sum_probs=34.8
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEc
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVG 252 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VG 252 (310)
+++..+++++.+++||+ +.+.+.++.++.++++.| +|.|.+-
T Consensus 246 ~~~~~~~l~~~~~iPIa--~dE~~~~~~~~~~~i~~~~~d~v~ik 288 (393)
T 2og9_A 246 DHEGHAALALQFDTPIA--TGEMLTSAAEHGDLIRHRAADYLMPD 288 (393)
T ss_dssp CHHHHHHHHHHCSSCEE--ECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred cHHHHHHHHHhCCCCEE--eCCCcCCHHHHHHHHHCCCCCEEeeC
Confidence 46777888887889998 678999999999999876 7888753
No 407
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=87.61 E-value=5.5 Score=36.71 Aligned_cols=43 Identities=21% Similarity=0.191 Sum_probs=35.6
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCC-HHHHHHHHHcC-CCEEEEcc
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVAT-PADAAMMMQLG-CDGVFVGS 253 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t-~~d~~~~l~~G-adgV~VGs 253 (310)
+++..+++++.+++||+ +.+.+.+ +.++.++++.| +|.|++--
T Consensus 239 ~~~~~~~l~~~~~iPIa--~dE~~~~~~~~~~~~i~~~~~d~v~ik~ 283 (382)
T 1rvk_A 239 SLSSYKWLSDNLDIPVV--GPESAAGKHWHRAEWIKAGACDILRTGV 283 (382)
T ss_dssp CHHHHHHHHHHCSSCEE--ECSSCSSHHHHHHHHHHTTCCSEEEECH
T ss_pred hHHHHHHHHhhCCCCEE--EeCCccCcHHHHHHHHHcCCCCEEeeCc
Confidence 46677888877889998 6899999 99999999776 89988743
No 408
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=87.59 E-value=2.7 Score=37.62 Aligned_cols=85 Identities=21% Similarity=0.298 Sum_probs=49.4
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAA 229 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~ 229 (310)
+....+.|++.+.+.|.++-. .+++.++- .++++.+.+. .++||++ ..
T Consensus 28 v~~li~~Gv~gl~~~GttGE~-------------------~~Ls~~Er----------~~v~~~~~~~~~gr~pvi~-Gv 77 (291)
T 3a5f_A 28 IEWHIKSKTDAIIVCGTTGEA-------------------TTMTETER----------KETIKFVIDKVNKRIPVIA-GT 77 (291)
T ss_dssp HHHHHHTTCCEEEESSGGGTG-------------------GGSCHHHH----------HHHHHHHHHHHTTSSCEEE-EC
T ss_pred HHHHHHcCCCEEEECccccCh-------------------hhCCHHHH----------HHHHHHHHHHhCCCCcEEE-eC
Confidence 455677899999888764322 22232211 1223333221 4689985 45
Q ss_pred CCCCCHHHHHH---HHHcCCCEEEEccccccCCCHHHHHH
Q 021575 230 GGVATPADAAM---MMQLGCDGVFVGSGVFKSGDPVKRAQ 266 (310)
Q Consensus 230 GGI~t~~d~~~---~l~~GadgV~VGsai~~a~dp~~~a~ 266 (310)
|+.++.+.+.. +.++|||++++....|..+++....+
T Consensus 78 g~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~ 117 (291)
T 3a5f_A 78 GSNNTAASIAMSKWAESIGVDGLLVITPYYNKTTQKGLVK 117 (291)
T ss_dssp CCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHH
T ss_pred CcccHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHH
Confidence 66544443322 33579999999999997666544443
No 409
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=87.59 E-value=8.7 Score=35.26 Aligned_cols=52 Identities=6% Similarity=-0.174 Sum_probs=39.5
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccccCCCHHHH
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVFKSGDPVKR 264 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~~a~dp~~~ 264 (310)
+++.++++++.+++||+ +.+.+.++.++.++++.| +|.|++--.-+. .+..+
T Consensus 230 d~~~~~~l~~~~~iPI~--~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~G--Gi~~~ 282 (371)
T 2ovl_A 230 DLVGNARIVRESGHTIA--GGENLHTLYDFHNAVRAGSLTLPEPDVSNIG--GYTTF 282 (371)
T ss_dssp CHHHHHHHHHHHCSCEE--ECTTCCSHHHHHHHHHHTCCSEECCCTTTTT--SHHHH
T ss_pred cHHHHHHHHhhCCCCEE--eCCCCCCHHHHHHHHHcCCCCEEeeCccccC--CHHHH
Confidence 46677788777789998 789999999999999765 899887654443 44433
No 410
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=87.54 E-value=1.5 Score=40.20 Aligned_cols=71 Identities=13% Similarity=0.003 Sum_probs=49.0
Q ss_pred HHHHHHHHcCCcEEEec-cCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcC-CCEEE
Q 021575 46 EQARVAEEAGACAVMAL-ERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIG-IDYVD 119 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L-~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aG-ad~Vi 119 (310)
+.++.+++.|++.| ++ +..........+ ...+.+.++++++.+++||++...+...++++.+.+.| ||.|.
T Consensus 233 ~~a~~l~~~Gvd~i-~v~~~~~~~~~~~~~--~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~ 305 (338)
T 1z41_A 233 GFAKWMKEQGVDLI-DCSSGALVHADINVF--PGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIF 305 (338)
T ss_dssp HHHHHHHHTTCCEE-EEECCCSSCCCCCCC--TTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHcCCCEE-EEecCccccCCCCCC--ccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEe
Confidence 57889999999987 43 111000000000 01236788999999999999988876678888888888 99994
No 411
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=87.52 E-value=8.6 Score=35.62 Aligned_cols=42 Identities=12% Similarity=0.023 Sum_probs=34.7
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEc
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVG 252 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VG 252 (310)
+++..+++++.+++||+ +.+.+.++.++.++++.| +|.|.+-
T Consensus 233 d~~~~~~l~~~~~iPIa--~dE~~~~~~~~~~~i~~~~~d~v~ik 275 (391)
T 2qgy_A 233 NISLLTEIKNTFNMKVV--TGEKQSGLVHFRELISRNAADIFNPD 275 (391)
T ss_dssp CHHHHHHHHHHCSSCEE--ECTTCCSHHHHHHHHHTTCCSEECCB
T ss_pred hHHHHHHHHhhCCCCEE--EcCCcCCHHHHHHHHHcCCCCEEEEC
Confidence 46677888877889998 679999999999999776 7888774
No 412
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=87.49 E-value=5.9 Score=37.51 Aligned_cols=224 Identities=16% Similarity=0.114 Sum_probs=0.0
Q ss_pred ccccCCCHHHHHHHHHcCCcEEEecc----CC-----cccccccCCCCCCCCHHHHHHHHhhc-----------------
Q 021575 38 VIMDVVTPEQARVAEEAGACAVMALE----RV-----PADIRSQGGVARMSDPQLIKEIKQSV----------------- 91 (310)
Q Consensus 38 ~i~~~~~~~~A~~~~~~Ga~~i~~L~----~~-----~~~~~~~~G~~~~~~~~~i~~i~~~~----------------- 91 (310)
.+..+-|+-.|+.++++|+++| .+. .. ....-..+-..+...++.+++|.+.+
T Consensus 64 ~~~ga~D~~sA~~~~~aGf~Ai-y~SG~~vAa~~~~~~~G~PD~~~~~~~ev~~~v~rI~~a~~~~d~~~~~~~~~~~~~ 142 (433)
T 3eol_A 64 NALGALSGNQAMQMVRAGLKAI-YLSGWQVAADANTASAMYPDQSLYPANAGPELAKRINRTLQRADQIETAEGKGLSVD 142 (433)
T ss_dssp EEEBCSSHHHHHHHHHTTCCCE-EEC-----------------------CHHHHHHHHHHHHHHHHHHHHHHTTSCCSSS
T ss_pred EeCCCCcHHHHHHHHHhCCCEE-EechHHHHhccchhcCCCCCCccCCHHHHHHHHHHHHHHHHHhhhhhhhhccccccc
Q ss_pred --CcceeeccccCc------HHHHHHHHHcCCCEEEeCCCC---------------CchhHHHHHHhc-------CCCCc
Q 021575 92 --TIPVMAKARIGH------FVEAQILEAIGIDYVDESEVL---------------TPADEENHINKH-------NFRIP 141 (310)
Q Consensus 92 --~iPv~vk~~~~~------~~~a~~~~~aGad~Vi~~~~~---------------~~~~~~~~i~~~-------~~~i~ 141 (310)
.+||++..-.|+ ...++.++++||-+|.+-|.. +..+....|+.. +.++.
T Consensus 143 d~~lPIiaD~DtGfG~~~nv~rtVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g~d~v 222 (433)
T 3eol_A 143 TWFAPIVADAEAGFGDPLDAFEIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMGTPTL 222 (433)
T ss_dssp CSCCCEEEECC---CCHHHHHHHHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHTCCCE
T ss_pred CCCCCeEEECCCCCCCcHHHHHHHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCEE
Q ss_pred EEEecCC-----------------------------------HHHHHH---HHHhCCCEEEEcCCCCCcchHHHHHHHHh
Q 021575 142 FVCGCRN-----------------------------------LGEALR---RIREGAAMIRTKGEAGTGNIIEAVRHVRS 183 (310)
Q Consensus 142 ~~v~~~t-----------------------------------~~ea~~---~~~~Gad~V~v~g~~~~~~~~~~~~~~r~ 183 (310)
+++-+.. .+++.+ +...|+|.|.++.
T Consensus 223 IiARTDA~~a~l~~s~~d~rd~~fl~g~g~r~~eG~y~~~~gld~AI~Ra~AY~~GAD~If~e~---------------- 286 (433)
T 3eol_A 223 IVARTDAEAAKLLTSDIDERDQPFVDYEAGRTAEGFYQVKNGIEPCIARAIAYAPYCDLIWMET---------------- 286 (433)
T ss_dssp EEEEECTTTCCEESCCCSTTTGGGBCSSSCBCTTCCEEBCCSHHHHHHHHHHHGGGCSEEEECC----------------
T ss_pred EEEEcCCccccccccCcccccccceeccCcccccccccccCCHHHHHHHHHHHHhcCCEEEEeC----------------
Q ss_pred hccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCC--CCEEEeCCCCCCCHH-----H-------HHHHHHcCCCEE
Q 021575 184 VMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGR--LPVVHFAAGGVATPA-----D-------AAMMMQLGCDGV 249 (310)
Q Consensus 184 ~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~--iPVi~iA~GGI~t~~-----d-------~~~~l~~GadgV 249 (310)
..++.+.++.+.+..+ .|+-..+.+.--+.. + ..++-++|+.-+
T Consensus 287 ----------------------~~~~~eei~~f~~~v~~~~P~~~L~~~~sPsfnw~~~~~~~~~~~f~~eLa~lGv~~v 344 (433)
T 3eol_A 287 ----------------------SKPDLAQARRFAEAVHKAHPGKLLAYNCSPSFNWKKNLDDATIAKFQRELGAMGYKFQ 344 (433)
T ss_dssp ----------------------SSCCHHHHHHHHHHHHHHSTTCCEEEECCSSSCHHHHSCHHHHHHHHHHHHHHTEEEE
T ss_pred ----------------------CCCCHHHHHHHHHHhcccCCCcccccCCCCCCcccccCChhHHhHHHHHHHHcCCeEE
Q ss_pred EEccccccCCCHHHHHHHHHHHHhccCChhhhhhhhhhcccch--hcccCccchhhhhc
Q 021575 250 FVGSGVFKSGDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAM--VGLNLSDHKVERFA 306 (310)
Q Consensus 250 ~VGsai~~a~dp~~~a~~l~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 306 (310)
.++.+.++ ..+..+.+..+.+.+...+..+. ...++. .-.|.+..+-.+|.
T Consensus 345 ~~~~a~~r-----aa~~A~~~~a~~i~~~G~~ayve-~Q~~e~~~~~~g~~~~~hq~~~ 397 (433)
T 3eol_A 345 FITLAGFH-----QLNYGMFELARGYKDRQMAAYSE-LQQAEFAAEADGYTATKHQREV 397 (433)
T ss_dssp EETTHHHH-----HHHHHHHHHHHHHHHHTHHHHHH-HHHHHHHHGGGTCCCC------
T ss_pred EeCcHHHH-----HHHHHHHHHHHHHHHcCCHHHHH-HHHHhhhhhccCceeeeccccc
No 413
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=87.48 E-value=2.8 Score=36.87 Aligned_cols=130 Identities=15% Similarity=0.151 Sum_probs=67.0
Q ss_pred cchhhhhhCcccccCCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHH---Hhh---cCcceeecccc
Q 021575 28 VGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEI---KQS---VTIPVMAKARI 101 (310)
Q Consensus 28 ~~~~~~~~~g~i~~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i---~~~---~~iPv~vk~~~ 101 (310)
.|++..+..| +.... .+.++.+.++|+.++ .|+.+. ...|.......+.+.+| +++ .++|+.+.-+.
T Consensus 81 ~pviaD~~~G-yg~~~-~~~~~~l~~aGa~gv-~iEd~~----~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRt 153 (255)
T 2qiw_A 81 IPVSVDVESG-YGLSP-ADLIAQILEAGAVGI-NVEDVV----HSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRT 153 (255)
T ss_dssp SCEEEECTTC-TTCCH-HHHHHHHHHTTCCEE-EECSEE----GGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEE
T ss_pred CCEEeccCCC-cCcHH-HHHHHHHHHcCCcEE-EECCCC----CCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 3555545555 32211 677889999999997 775221 00011111112334444 333 26886554332
Q ss_pred C---------------cHHHHHHHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEe-cCCH----HHHHHHHHhCCC
Q 021575 102 G---------------HFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCG-CRNL----GEALRRIREGAA 161 (310)
Q Consensus 102 ~---------------~~~~a~~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~-~~t~----~ea~~~~~~Gad 161 (310)
+ ..++++.+.++|||.|..... +..+..+.+.+ ...+|..+- .... -....+.++|+.
T Consensus 154 d~~~~g~~~~~~~~~~ai~ra~a~~eAGAd~i~~e~~-~~~~~~~~i~~-~~~~P~n~~~~~~~~~p~~~~~eL~~lGv~ 231 (255)
T 2qiw_A 154 DAVKLGADVFEDPMVEAIKRIKLMEQAGARSVYPVGL-STAEQVERLVD-AVSVPVNITAHPVDGHGAGDLATLAGLGVR 231 (255)
T ss_dssp CHHHHCTTTSSSHHHHHHHHHHHHHHHTCSEEEECCC-CSHHHHHHHHT-TCSSCBEEECBTTTBBTTBCHHHHHHTTCC
T ss_pred chhhccCCcchHHHHHHHHHHHHHHHcCCcEEEEcCC-CCHHHHHHHHH-hCCCCEEEEecCCCCCCCCCHHHHHHcCCC
Confidence 2 135678889999999975433 33344444433 233332221 1111 134556788998
Q ss_pred EEEEc
Q 021575 162 MIRTK 166 (310)
Q Consensus 162 ~V~v~ 166 (310)
.|...
T Consensus 232 ~v~~~ 236 (255)
T 2qiw_A 232 RVTFG 236 (255)
T ss_dssp EEECT
T ss_pred EEEEH
Confidence 88754
No 414
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=87.42 E-value=16 Score=32.86 Aligned_cols=83 Identities=7% Similarity=0.042 Sum_probs=46.8
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCC-
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGI- 115 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGa- 115 (310)
..+..+.+.|+++++.+. . .|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|+
T Consensus 32 ~lv~~li~~Gv~Gl~v~G-t------TGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~ 104 (311)
T 3h5d_A 32 ALIEHLLAHHTDGILLAG-T------TAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGF 104 (311)
T ss_dssp HHHHHHHHTTCCCEEESS-T------TTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHcCCCEEEECc-c------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCC
Confidence 567788899999985441 1 1101112211 2333344443 589998765432 355678888997
Q ss_pred CEEE-eCCC---CCchhHHHHHHh
Q 021575 116 DYVD-ESEV---LTPADEENHINK 135 (310)
Q Consensus 116 d~Vi-~~~~---~~~~~~~~~i~~ 135 (310)
|+++ .+.. .+..++.++.+.
T Consensus 105 davlv~~P~y~~~s~~~l~~~f~~ 128 (311)
T 3h5d_A 105 AAGLAIVPYYNKPSQEGMYQHFKA 128 (311)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHH
T ss_pred cEEEEcCCCCCCCCHHHHHHHHHH
Confidence 9995 4332 234555555543
No 415
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=87.37 E-value=5.3 Score=36.66 Aligned_cols=44 Identities=16% Similarity=0.277 Sum_probs=36.3
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccc
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSG 254 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsa 254 (310)
+++..+++++..++||+ +.+.+.++.++.++++.| +|.|++--.
T Consensus 225 d~~~~~~l~~~~~iPI~--~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 269 (369)
T 2p8b_A 225 DIDAMAHIRSKTDLPLM--IDEGLKSSREMRQIIKLEAADKVNIKLM 269 (369)
T ss_dssp CHHHHHHHHHTCCSCEE--ESTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred cHHHHHHHHHhCCCCEE--eCCCCCCHHHHHHHHHhCCCCEEEeecc
Confidence 46778888888899998 678899999999999765 899987543
No 416
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=87.33 E-value=1.7 Score=39.78 Aligned_cols=77 Identities=19% Similarity=0.198 Sum_probs=51.1
Q ss_pred CCHHHHHHHHHcCCcEEEecc--CCc----ccccccC-----CCCCCCCHHHHHHHHhhc-CcceeeccccCcHHHHHHH
Q 021575 43 VTPEQARVAEEAGACAVMALE--RVP----ADIRSQG-----GVARMSDPQLIKEIKQSV-TIPVMAKARIGHFVEAQIL 110 (310)
Q Consensus 43 ~~~~~A~~~~~~Ga~~i~~L~--~~~----~~~~~~~-----G~~~~~~~~~i~~i~~~~-~iPv~vk~~~~~~~~a~~~ 110 (310)
.+++.|+.+.++|+++|+.-| ..+ ...+..+ ...-....+.+.++++.+ ++||++...+...+++..+
T Consensus 190 ~~~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~k~ 269 (349)
T 1p0k_A 190 MSKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQDALDVAKA 269 (349)
T ss_dssp CCHHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHH
Confidence 568999999999999983323 100 0001100 001123456788887776 8999998887777888888
Q ss_pred HHcCCCEEE
Q 021575 111 EAIGIDYVD 119 (310)
Q Consensus 111 ~~aGad~Vi 119 (310)
..+|||.|.
T Consensus 270 l~~GAd~V~ 278 (349)
T 1p0k_A 270 IALGASCTG 278 (349)
T ss_dssp HHTTCSEEE
T ss_pred HHcCCCEEE
Confidence 889999995
No 417
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=87.27 E-value=0.55 Score=40.81 Aligned_cols=49 Identities=18% Similarity=0.132 Sum_probs=39.2
Q ss_pred CHHHHHHHHhhc-CcceeeccccCcHHHHHHHHHcCCCEEE-eCCCCCchhH
Q 021575 80 DPQLIKEIKQSV-TIPVMAKARIGHFVEAQILEAIGIDYVD-ESEVLTPADE 129 (310)
Q Consensus 80 ~~~~i~~i~~~~-~iPv~vk~~~~~~~~a~~~~~aGad~Vi-~~~~~~~~~~ 129 (310)
+.+.++++++.+ ++|+.+...+...++++.+. .|||.|+ ++....+.++
T Consensus 167 ~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~~p~~ 217 (228)
T 3vzx_A 167 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYEDFDR 217 (228)
T ss_dssp CHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHHCHHH
T ss_pred CHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhcCHHH
Confidence 689999999999 89999999888878888887 7999996 5544433333
No 418
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=87.15 E-value=1.4 Score=41.30 Aligned_cols=62 Identities=23% Similarity=0.346 Sum_probs=42.7
Q ss_pred CcHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccc----cccCCCHHHHHHHHHHHH
Q 021575 208 APYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSG----VFKSGDPVKRAQAIVRAV 272 (310)
Q Consensus 208 ~~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsa----i~~a~dp~~~a~~l~~~i 272 (310)
..++.++++++..++||++ .|+.+++++..+.++|+|+|.|+.. +...........++.+++
T Consensus 239 ~~~~~i~~lr~~~~~Pviv---Kgv~~~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av 304 (392)
T 2nzl_A 239 ISWEDIKWLRRLTSLPIVA---KGILRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAV 304 (392)
T ss_dssp CCHHHHHHHC--CCSCEEE---EEECCHHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCEEE---EecCCHHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHc
Confidence 3578899999888999984 5778999999999999999999432 222223344444555555
No 419
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=87.09 E-value=17 Score=32.80 Aligned_cols=67 Identities=18% Similarity=0.241 Sum_probs=40.1
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGad 116 (310)
..+..+.+.|+++++.+. . .|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|||
T Consensus 36 ~lv~~li~~Gv~gl~v~G-t------TGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 108 (318)
T 3qfe_A 36 RYYAYLARSGLTGLVILG-T------NAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGAN 108 (318)
T ss_dssp HHHHHHHTTTCSEEEESS-G------GGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEeCc-c------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCC
Confidence 467778899999985441 1 1101112212 2333334443 589998765332 4667888889999
Q ss_pred EEE
Q 021575 117 YVD 119 (310)
Q Consensus 117 ~Vi 119 (310)
+++
T Consensus 109 avl 111 (318)
T 3qfe_A 109 YVL 111 (318)
T ss_dssp EEE
T ss_pred EEE
Confidence 996
No 420
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=87.08 E-value=8.8 Score=33.49 Aligned_cols=36 Identities=25% Similarity=0.459 Sum_probs=29.7
Q ss_pred CCCEEEeCCCCCCCHHHHHHHH-HcCCCEEEEccccccCCC
Q 021575 221 RLPVVHFAAGGVATPADAAMMM-QLGCDGVFVGSGVFKSGD 260 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~~d~~~~l-~~GadgV~VGsai~~a~d 260 (310)
+++|+ -+|+| +++++.+++ ....||++||++=++ ++
T Consensus 199 ~vrIl--YGGSV-~~~N~~~l~~~~diDG~LVGgASL~-~~ 235 (244)
T 2v5b_A 199 QLRIL--YGGSV-TAKNARTLYQMRDINGFLVGGASLK-PE 235 (244)
T ss_dssp HCEEE--ECSCC-CHHHHHHHHTSTTCCEEEESGGGSS-TT
T ss_pred cccEE--EcCCC-CHhHHHHHhcCCCCCeeeechHHHH-HH
Confidence 47888 36777 799999998 468999999999987 55
No 421
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=86.81 E-value=4.7 Score=37.34 Aligned_cols=84 Identities=19% Similarity=0.214 Sum_probs=49.0
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAA 229 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~ 229 (310)
+....+.|++.+.+.|.++-. .+++.++- .++++.+.+. .++||++ ..
T Consensus 86 v~~li~~Gv~Gl~v~GTTGE~-------------------~~Ls~eEr----------~~vi~~~ve~~~grvpVia-Gv 135 (360)
T 4dpp_A 86 VNIQIQNGAEGVIVGGTTGEG-------------------QLMSWDEH----------IMLIGHTVNCFGGSIKVIG-NT 135 (360)
T ss_dssp HHHHHHTTCCEEEESSTTTTG-------------------GGSCHHHH----------HHHHHHHHHHHTTTSEEEE-EC
T ss_pred HHHHHHcCCCEEEecccccCh-------------------hhCCHHHH----------HHHHHHHHHHhCCCCeEEE-ec
Confidence 445667899999988865422 12222211 1223322221 4689985 35
Q ss_pred CCCCCHHHHHHH----HHcCCCEEEEccccccCCCHHHHHH
Q 021575 230 GGVATPADAAMM----MQLGCDGVFVGSGVFKSGDPVKRAQ 266 (310)
Q Consensus 230 GGI~t~~d~~~~----l~~GadgV~VGsai~~a~dp~~~a~ 266 (310)
|+-+ .+++.++ .++|||++++-...+..++.....+
T Consensus 136 g~~s-t~eai~la~~A~~~Gadavlvv~PyY~k~sq~gl~~ 175 (360)
T 4dpp_A 136 GSNS-TREAIHATEQGFAVGMHAALHINPYYGKTSIEGLIA 175 (360)
T ss_dssp CCSS-HHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHH
T ss_pred CCCC-HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHH
Confidence 5554 4443333 3579999999999987666554444
No 422
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=86.79 E-value=1.2 Score=40.40 Aligned_cols=82 Identities=18% Similarity=0.122 Sum_probs=51.6
Q ss_pred HHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHH-cCCCEEE-eCC
Q 021575 45 PEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEA-IGIDYVD-ESE 122 (310)
Q Consensus 45 ~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~-aGad~Vi-~~~ 122 (310)
.+.|+.++++|+++|..-..... ....+ ..+.+.++++++ ++||++...+...+++..+.+ .|||+|. +..
T Consensus 143 ~~~a~~l~~~G~d~i~v~g~~~~--~~~~~---~~~~~~i~~i~~--~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~ 215 (318)
T 1vhn_A 143 EEIYRILVEEGVDEVFIHTRTVV--QSFTG---RAEWKALSVLEK--RIPTFVSGDIFTPEDAKRALEESGCDGLLVARG 215 (318)
T ss_dssp HHHHHHHHHTTCCEEEEESSCTT--TTTSS---CCCGGGGGGSCC--SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGG
T ss_pred HHHHHHHHHhCCCEEEEcCCCcc--ccCCC---CcCHHHHHHHHc--CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHH
Confidence 37899999999999822111100 00111 123466777776 899999888766678877776 7999995 444
Q ss_pred CCCchhHHHHH
Q 021575 123 VLTPADEENHI 133 (310)
Q Consensus 123 ~~~~~~~~~~i 133 (310)
.+..+++...+
T Consensus 216 ~l~~P~l~~~~ 226 (318)
T 1vhn_A 216 AIGRPWIFKQI 226 (318)
T ss_dssp GTTCTTHHHHH
T ss_pred HHhCcchHHHH
Confidence 44444443333
No 423
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=86.65 E-value=5.4 Score=35.40 Aligned_cols=34 Identities=29% Similarity=0.566 Sum_probs=28.3
Q ss_pred CCCEEEeCCCCCCCHHHHHHHH-HcCCCEEEEcccccc
Q 021575 221 RLPVVHFAAGGVATPADAAMMM-QLGCDGVFVGSGVFK 257 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~~d~~~~l-~~GadgV~VGsai~~ 257 (310)
+++|+ -+|+| +++++.+++ ..+.||++||++-++
T Consensus 226 ~vrIL--YGGSV-~~~N~~el~~~~diDG~LVGgASL~ 260 (271)
T 3krs_A 226 NLRII--YGGSV-TPDNCNELIKCADIDGFLVGGASLK 260 (271)
T ss_dssp HCCEE--ECSCC-CTTTHHHHHHSTTCCEEEESGGGGS
T ss_pred CccEE--EcCCc-CHHHHHHHhcCCCCCEEEeeHHhhh
Confidence 47898 46888 588888877 579999999999997
No 424
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=86.62 E-value=3 Score=39.51 Aligned_cols=36 Identities=14% Similarity=0.014 Sum_probs=23.1
Q ss_pred cchhhhhhCcccccCCCHHHHHHHHHcCCcEEEeccC
Q 021575 28 VGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALER 64 (310)
Q Consensus 28 ~~~~~~~~~g~i~~~~~~~~A~~~~~~Ga~~i~~L~~ 64 (310)
.|++.....|+-....-.+.++.++++|+.++ .++.
T Consensus 149 ~PIiaD~DtGfG~~~nv~~tvk~~i~AGaaGi-~IED 184 (429)
T 1f8m_A 149 APIVADGEAGFGGALNVYELQKALIAAGVAGS-HWED 184 (429)
T ss_dssp CCEEEECTTTTSSHHHHHHHHHHHHHTTCSEE-EEEC
T ss_pred CCEEEECCCCCCCcHHHHHHHHHHHHcCCEEE-EEec
Confidence 45555444443333322378999999999997 7763
No 425
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=86.58 E-value=1.5 Score=42.55 Aligned_cols=61 Identities=20% Similarity=0.325 Sum_probs=44.8
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEc----cccccCCCHHHHHHHHHHHH
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVG----SGVFKSGDPVKRAQAIVRAV 272 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VG----sai~~a~dp~~~a~~l~~~i 272 (310)
.++.++++++..++||++ .|+.+++++..+.++|+|+|.|+ +.+.....+.....++.+.+
T Consensus 331 ~~~~i~~lr~~~~~Pviv---Kgv~~~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v 395 (511)
T 1kbi_A 331 TWKDIEELKKKTKLPIVI---KGVQRTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPIL 395 (511)
T ss_dssp CHHHHHHHHHHCSSCEEE---EEECSHHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCcEEE---EeCCCHHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHH
Confidence 478889999888999984 57778999999999999999993 33333333444455555555
No 426
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=86.54 E-value=18 Score=32.49 Aligned_cols=82 Identities=15% Similarity=0.137 Sum_probs=46.7
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGad 116 (310)
..++.+.+.|+++++.+. ..|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|||
T Consensus 33 ~lv~~li~~Gv~gl~v~G-------tTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gad 105 (309)
T 3fkr_A 33 RAVDFMIDAGSDGLCILA-------NFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAA 105 (309)
T ss_dssp HHHHHHHHTTCSCEEESS-------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEECc-------cccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCC
Confidence 467778899999985441 11101112211 2333334433 699998765332 4667888899999
Q ss_pred EEE-eCCC------CCchhHHHHHH
Q 021575 117 YVD-ESEV------LTPADEENHIN 134 (310)
Q Consensus 117 ~Vi-~~~~------~~~~~~~~~i~ 134 (310)
+++ .+.. .+..++.++.+
T Consensus 106 avlv~~Pyy~~~~~~s~~~l~~~f~ 130 (309)
T 3fkr_A 106 MVMAMPPYHGATFRVPEAQIFEFYA 130 (309)
T ss_dssp EEEECCSCBTTTBCCCHHHHHHHHH
T ss_pred EEEEcCCCCccCCCCCHHHHHHHHH
Confidence 996 3332 23455555544
No 427
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=86.54 E-value=5.2 Score=35.19 Aligned_cols=34 Identities=21% Similarity=0.481 Sum_probs=28.1
Q ss_pred CCCEEEeCCCCCCCHHHHHHHH-HcCCCEEEEcccccc
Q 021575 221 RLPVVHFAAGGVATPADAAMMM-QLGCDGVFVGSGVFK 257 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~~d~~~~l-~~GadgV~VGsai~~ 257 (310)
+++|+ -+|+| +++++.+++ ..+.||++||++-++
T Consensus 207 ~vrIl--YGGSV-~~~N~~~l~~~~diDG~LVGgASL~ 241 (255)
T 3qst_A 207 KVRIL--YGGSV-KPNNCNELAACPDVDGFLVGGASLE 241 (255)
T ss_dssp HCEEE--ECSCC-CTTTHHHHHHSTTCCEEEECGGGGS
T ss_pred cccEE--EcCCc-CHhHHHHHhcCCCCCEEEeeHHHhh
Confidence 47888 46888 588888877 579999999999997
No 428
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=86.45 E-value=5.5 Score=36.57 Aligned_cols=50 Identities=20% Similarity=0.313 Sum_probs=32.1
Q ss_pred CCCCEEEeCCCCCCCHHHHHH---HHHcCCCEEEEccccccC-CCHHHHHHHHHH
Q 021575 220 GRLPVVHFAAGGVATPADAAM---MMQLGCDGVFVGSGVFKS-GDPVKRAQAIVR 270 (310)
Q Consensus 220 ~~iPVi~iA~GGI~t~~d~~~---~l~~GadgV~VGsai~~a-~dp~~~a~~l~~ 270 (310)
.++||++ ..|+.++.+-+.. +.++|||++++....|.. .+.....+-|..
T Consensus 91 grvpVia-Gvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~ 144 (344)
T 2hmc_A 91 AGIPVIV-GTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKA 144 (344)
T ss_dssp TTCCEEE-ECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHH
T ss_pred CCCcEEE-ecCCCCHHHHHHHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHH
Confidence 5799985 4566544433322 335799999999999976 565555443333
No 429
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=86.45 E-value=0.9 Score=41.41 Aligned_cols=74 Identities=16% Similarity=0.294 Sum_probs=49.1
Q ss_pred HHHHHHHHcCCcEEEeccCC--cccc------cccCCCCC----CCCHHHHHHHHhhc--CcceeeccccCcHHHHHHHH
Q 021575 46 EQARVAEEAGACAVMALERV--PADI------RSQGGVAR----MSDPQLIKEIKQSV--TIPVMAKARIGHFVEAQILE 111 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~--~~~~------~~~~G~~~----~~~~~~i~~i~~~~--~iPv~vk~~~~~~~~a~~~~ 111 (310)
+.|+.++++|+|+|..-|.. .... ...+|..- ....+.++++++.+ ++||+....+...+++..+.
T Consensus 229 ~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l 308 (336)
T 1f76_A 229 QVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKI 308 (336)
T ss_dssp HHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHH
Confidence 56899999999998433311 0000 01111100 01236788888888 89999988887778898888
Q ss_pred HcCCCEEE
Q 021575 112 AIGIDYVD 119 (310)
Q Consensus 112 ~aGad~Vi 119 (310)
++|||.|-
T Consensus 309 ~~GAd~V~ 316 (336)
T 1f76_A 309 AAGASLVQ 316 (336)
T ss_dssp HHTCSEEE
T ss_pred HCCCCEEE
Confidence 99999994
No 430
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=86.44 E-value=2.9 Score=37.92 Aligned_cols=47 Identities=19% Similarity=0.137 Sum_probs=30.6
Q ss_pred CCCCEEEeCCCCCCCHHHHHHH----HHcCCCEEEEccccccCCCHHHHHHHHH
Q 021575 220 GRLPVVHFAAGGVATPADAAMM----MQLGCDGVFVGSGVFKSGDPVKRAQAIV 269 (310)
Q Consensus 220 ~~iPVi~iA~GGI~t~~d~~~~----l~~GadgV~VGsai~~a~dp~~~a~~l~ 269 (310)
.++||++ ..|. +.++..++ .++|||++++....+..+++....+-|.
T Consensus 80 grvpVia-Gvg~--~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~ 130 (316)
T 3e96_A 80 GRALVVA-GIGY--ATSTAIELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFR 130 (316)
T ss_dssp TSSEEEE-EECS--SHHHHHHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHH
T ss_pred CCCcEEE-EeCc--CHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHH
Confidence 4689984 2343 44544333 3579999999999997666655554333
No 431
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=86.30 E-value=6.1 Score=36.73 Aligned_cols=41 Identities=17% Similarity=0.272 Sum_probs=34.2
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEE
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFV 251 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~V 251 (310)
+++..+++++..++||+ +.+.+.++.++.++++.| +|.|.+
T Consensus 228 ~~~~~~~l~~~~~iPIa--~dE~~~~~~~~~~~i~~~~~d~v~i 269 (397)
T 2qde_A 228 DLDGMARLRGKVATPIY--ADESAQELHDLLAIINKGAADGLMI 269 (397)
T ss_dssp CHHHHHHHHTTCSSCEE--ESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred hHHHHHHHHhhCCCCEE--EeCCcCCHHHHHHHHHcCCCCEEEE
Confidence 46777888887889998 678899999999999765 888887
No 432
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=86.29 E-value=7.8 Score=34.94 Aligned_cols=88 Identities=14% Similarity=0.191 Sum_probs=51.8
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAA 229 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~ 229 (310)
+....+.|++.+.+.|.++-. .+++.++- .++++.+.+. .++||++ ..
T Consensus 34 v~~li~~Gv~Gl~v~GtTGE~-------------------~~Ls~~Er----------~~v~~~~~~~~~grvpVia-Gv 83 (311)
T 3h5d_A 34 IEHLLAHHTDGILLAGTTAES-------------------PTLTHDEE----------LELFAAVQKVVNGRVPLIA-GV 83 (311)
T ss_dssp HHHHHHTTCCCEEESSTTTTG-------------------GGSCHHHH----------HHHHHHHHHHSCSSSCEEE-EC
T ss_pred HHHHHHcCCCEEEECccccCh-------------------hhCCHHHH----------HHHHHHHHHHhCCCCcEEE-eC
Confidence 445678899999888865422 22222211 2233333332 4699985 44
Q ss_pred CCCCCHHHHHH----HHHcCC-CEEEEccccccCCCHHHHHHHHHH
Q 021575 230 GGVATPADAAM----MMQLGC-DGVFVGSGVFKSGDPVKRAQAIVR 270 (310)
Q Consensus 230 GGI~t~~d~~~----~l~~Ga-dgV~VGsai~~a~dp~~~a~~l~~ 270 (310)
|+-+ .++..+ +.++|+ |++++....+..+++....+-|..
T Consensus 84 g~~~-t~~ai~la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~ 128 (311)
T 3h5d_A 84 GTND-TRDSIEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKA 128 (311)
T ss_dssp CCSS-HHHHHHHHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHH
T ss_pred CCcC-HHHHHHHHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHH
Confidence 5554 444433 235687 999999999877776655553333
No 433
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=86.28 E-value=17 Score=32.19 Aligned_cols=161 Identities=14% Similarity=0.085 Sum_probs=82.7
Q ss_pred HHHHHHHH-cCCCEEE--eCC----CCCchhHH---HHHHh-cCCCCcEEEe--cCCHHHHH----HHHHhCCCEEEEcC
Q 021575 105 VEAQILEA-IGIDYVD--ESE----VLTPADEE---NHINK-HNFRIPFVCG--CRNLGEAL----RRIREGAAMIRTKG 167 (310)
Q Consensus 105 ~~a~~~~~-aGad~Vi--~~~----~~~~~~~~---~~i~~-~~~~i~~~v~--~~t~~ea~----~~~~~Gad~V~v~g 167 (310)
..++-+.+ .|+|+++ ++- .++.+|-. +...+ ..-.++++++ .++.+++. .+.++|+|.+.+..
T Consensus 28 ~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 107 (293)
T 1f6k_A 28 QIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVT 107 (293)
T ss_dssp HHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 44566778 9999985 322 24544443 33333 2224666555 45555544 45568999987766
Q ss_pred CCC-CcchHHHHHHHHhhccc----eEeec--c-----cChhHHHHhh--------hccCCcHHHHHHHhhc-CCCCEEE
Q 021575 168 EAG-TGNIIEAVRHVRSVMGD----IRVLR--N-----MDDDEVFTFA--------KKIAAPYDLVMQTKQL-GRLPVVH 226 (310)
Q Consensus 168 ~~~-~~~~~~~~~~~r~~~~~----~~~l~--~-----~~~d~~~~~~--------~~~~~~~~~i~~i~~~-~~iPVi~ 226 (310)
+.| ..+-....++.+..... +-++. . ++++.+.+.+ |+...+...+.++.+. .+..|+
T Consensus 108 P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiK~s~gd~~~~~~~~~~~~~f~v~- 186 (293)
T 1f6k_A 108 PFYYKFSFPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGELYKNPKVLGVKFTAGDFYLLERLKKAYPNHLIW- 186 (293)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHHHTSTTEEEEEECSCCHHHHHHHHHHCTTSEEE-
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCEEEEECccccCcCCCHHHHHHHhcCCCEEEEEECCCCHHHHHHHHHhCCCeEEE-
Confidence 544 22323555666553322 22222 1 2333332221 2233344444444432 233343
Q ss_pred eCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhcc
Q 021575 227 FAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHY 275 (310)
Q Consensus 227 iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~ 275 (310)
.|- -+.+...+..|++|++-+.+=+- |... .++.++++++
T Consensus 187 ---~G~--d~~~~~~l~~G~~G~is~~~n~~---P~~~-~~l~~a~~~G 226 (293)
T 1f6k_A 187 ---AGF--DEMMLPAASLGVDGAIGSTFNVN---GVRA-RQIFELTKAG 226 (293)
T ss_dssp ---ECC--GGGHHHHHHTTCSEEEESTHHHH---HHHH-HHHHHHHHTT
T ss_pred ---ECc--HHHHHHHHHCCCcEEEeCHHHhh---HHHH-HHHHHHHHCC
Confidence 342 24577778899999998876442 4333 3355555443
No 434
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=86.19 E-value=4.8 Score=36.08 Aligned_cols=120 Identities=16% Similarity=0.100 Sum_probs=63.6
Q ss_pred HHHHHHHHcCCcEEEeccCC--cccccccC--CCCCCCCHHHHHHHHhhc----CcceeeccccC----------cHHHH
Q 021575 46 EQARVAEEAGACAVMALERV--PADIRSQG--GVARMSDPQLIKEIKQSV----TIPVMAKARIG----------HFVEA 107 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~--~~~~~~~~--G~~~~~~~~~i~~i~~~~----~iPv~vk~~~~----------~~~~a 107 (310)
+.++.++++|+.++ .|+.+ ++.....+ |.......+.+.+|+... .-++.+.-|.. ..+++
T Consensus 94 ~~v~~l~~aGa~gv-~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra 172 (290)
T 2hjp_A 94 YVVPQYEAAGASAI-VMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQEAVRRG 172 (290)
T ss_dssp HHHHHHHHHTCSEE-EEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHHHHHHHH
T ss_pred HHHHHHHHhCCeEE-EEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHHHHHHHH
Confidence 56888899999997 77633 22211212 222222224466665322 22344432211 13667
Q ss_pred HHHHHcCCCEEEeCC-CCCchhHHHHHHhcCCCCcEEEecC--CHHHHHHHHHhC-CCEEEEc
Q 021575 108 QILEAIGIDYVDESE-VLTPADEENHINKHNFRIPFVCGCR--NLGEALRRIREG-AAMIRTK 166 (310)
Q Consensus 108 ~~~~~aGad~Vi~~~-~~~~~~~~~~i~~~~~~i~~~v~~~--t~~ea~~~~~~G-ad~V~v~ 166 (310)
+.+.++|||.|.... ..++.++.+..+.....+++++-+. ..-....+.++| +..|...
T Consensus 173 ~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~~vP~i~n~~~~~~~~~~eL~~lG~v~~v~~~ 235 (290)
T 2hjp_A 173 QAYEEAGADAILIHSRQKTPDEILAFVKSWPGKVPLVLVPTAYPQLTEADIAALSKVGIVIYG 235 (290)
T ss_dssp HHHHHTTCSEEEECCCCSSSHHHHHHHHHCCCSSCEEECGGGCTTSCHHHHHTCTTEEEEEEC
T ss_pred HHHHHcCCcEEEeCCCCCCHHHHHHHHHHcCCCCCEEEeccCCCCCCHHHHHhcCCeeEEEec
Confidence 889999999997554 3335556555544322266654332 011245567889 8888754
No 435
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=86.18 E-value=2.8 Score=37.48 Aligned_cols=83 Identities=11% Similarity=0.073 Sum_probs=57.6
Q ss_pred cEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcC
Q 021575 141 PFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG 220 (310)
Q Consensus 141 ~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~ 220 (310)
-++.++.+.+.|+.+.++|+..|.+.-+..+ ++ |. .-.. .--++.+.++++++.+
T Consensus 13 ~vimdv~~~eqa~iae~aGa~av~~l~~~p~-d~-------r~-------~gGv----------~Rm~dp~~I~~I~~aV 67 (291)
T 3o07_A 13 GVIMDVVTPEQAKIAEKSGACAVMALESIPA-DM-------RK-------SGKV----------CRMSDPKMIKDIMNSV 67 (291)
T ss_dssp CEEEEESSHHHHHHHHHHTCSEEEECSSCHH-HH-------HT-------TTCC----------CCCCCHHHHHHHHTTC
T ss_pred CeeeecCCHHHHHHHHHhCchhhhhccCCCc-hh-------hh-------cCCc----------cccCCHHHHHHHHHhC
Confidence 4677899999999999999998876532111 00 00 0000 0023577899999999
Q ss_pred CCCEEEeCCCCCCCHHHHHHHHHcCCCEEE
Q 021575 221 RLPVVHFAAGGVATPADAAMMMQLGCDGVF 250 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~~d~~~~l~~GadgV~ 250 (310)
++||+.. --|.....+..+..+|+|.|=
T Consensus 68 sIPVm~k--~righ~~EAqilea~GaD~ID 95 (291)
T 3o07_A 68 SIPVMAK--VRIGHFVEAQIIEALEVDYID 95 (291)
T ss_dssp SSCEEEE--EETTCHHHHHHHHHTTCSEEE
T ss_pred CCCeEEE--EecCcHHHHHHHHHcCCCEEe
Confidence 9999943 566677788877889999883
No 436
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=86.10 E-value=7.5 Score=34.53 Aligned_cols=114 Identities=17% Similarity=0.144 Sum_probs=62.4
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHH---hh---cCcceeeccccCc----------------
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIK---QS---VTIPVMAKARIGH---------------- 103 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~---~~---~~iPv~vk~~~~~---------------- 103 (310)
+.++.++++|+.++ .|+.+.. ..|.......+.+.+|+ ++ .++|+.+.-|...
T Consensus 96 ~~v~~l~~aGaagv-~iED~~~----~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~a 170 (275)
T 2ze3_A 96 RTVEHFAALGVAGV-NLEDATG----LTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAET 170 (275)
T ss_dssp HHHHHHHHTTCSEE-EEECBCS----SSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHH
T ss_pred HHHHHHHHcCCcEE-EECCCcC----CCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHHH
Confidence 56888999999997 7752210 01111222234455553 32 2678777543211
Q ss_pred HHHHHHHHHcCCCEEEeCCCCCchhHHHHHHhcCCCCcEEEecC-CHHHHHHHHHhCCCEEEEc
Q 021575 104 FVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCR-NLGEALRRIREGAAMIRTK 166 (310)
Q Consensus 104 ~~~a~~~~~aGad~Vi~~~~~~~~~~~~~i~~~~~~i~~~v~~~-t~~ea~~~~~~Gad~V~v~ 166 (310)
.++++.+.++|||.|......+..++.+..+.. .+|+.+-+. ..-....+.++|+..|...
T Consensus 171 i~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~--~~P~n~~~~~~~~~~~eL~~lGv~~v~~~ 232 (275)
T 2ze3_A 171 VRRGQAYADAGADGIFVPLALQSQDIRALADAL--RVPLNVMAFPGSPVPRALLDAGAARVSFG 232 (275)
T ss_dssp HHHHHHHHHTTCSEEECTTCCCHHHHHHHHHHC--SSCEEEECCTTSCCHHHHHHTTCSEEECT
T ss_pred HHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhc--CCCEEEecCCCCCCHHHHHHcCCcEEEEC
Confidence 245778888999999744432234445444432 333322221 1122456778899988754
No 437
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=86.04 E-value=0.82 Score=38.48 Aligned_cols=71 Identities=18% Similarity=0.121 Sum_probs=48.9
Q ss_pred CCCH-HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhc-CcceeeccccCcHHHHHHHHHcCCCEEE
Q 021575 42 VVTP-EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSV-TIPVMAKARIGHFVEAQILEAIGIDYVD 119 (310)
Q Consensus 42 ~~~~-~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~-~iPv~vk~~~~~~~~a~~~~~aGad~Vi 119 (310)
..++ +.++.+.+.|++.+ .+++.....+ +. ....+.++++++.+ ++|+.+...++ .+.+..+.++|||+++
T Consensus 113 ~~t~~~~~~~~~~~g~d~i-~v~~g~~g~~-~~----~~~~~~i~~l~~~~~~~~i~~~gGI~-~~~~~~~~~~Gad~vv 185 (211)
T 3f4w_A 113 VDDLPARVRLLEEAGADML-AVHTGTDQQA-AG----RKPIDDLITMLKVRRKARIAVAGGIS-SQTVKDYALLGPDVVI 185 (211)
T ss_dssp CSSHHHHHHHHHHHTCCEE-EEECCHHHHH-TT----CCSHHHHHHHHHHCSSCEEEEESSCC-TTTHHHHHTTCCSEEE
T ss_pred CCCHHHHHHHHHHcCCCEE-EEcCCCcccc-cC----CCCHHHHHHHHHHcCCCcEEEECCCC-HHHHHHHHHcCCCEEE
Confidence 3444 67888999999976 4432111111 11 12368889998886 89999877765 4678889999999996
No 438
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=85.96 E-value=19 Score=32.25 Aligned_cols=83 Identities=11% Similarity=0.133 Sum_probs=46.6
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGad 116 (310)
..+..+.+.|+++++.+. . .|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|+|
T Consensus 39 ~lv~~li~~Gv~Gl~v~G-t------TGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gad 111 (307)
T 3s5o_A 39 ENLHKLGTFPFRGFVVQG-S------NGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGAD 111 (307)
T ss_dssp HHHHHHTTSCCSEEEESS-G------GGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEECc-c------ccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCC
Confidence 356777889999985441 1 1101112211 2344444443 689988754322 4567888899999
Q ss_pred EEE-eCCC-----CCchhHHHHHHh
Q 021575 117 YVD-ESEV-----LTPADEENHINK 135 (310)
Q Consensus 117 ~Vi-~~~~-----~~~~~~~~~i~~ 135 (310)
+++ .+.. .+..++.++++.
T Consensus 112 avlv~~P~y~~~~~s~~~l~~~f~~ 136 (307)
T 3s5o_A 112 AAMVVTPCYYRGRMSSAALIHHYTK 136 (307)
T ss_dssp EEEEECCCTTGGGCCHHHHHHHHHH
T ss_pred EEEEcCCCcCCCCCCHHHHHHHHHH
Confidence 996 3432 234455555543
No 439
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=85.91 E-value=2.6 Score=36.61 Aligned_cols=116 Identities=15% Similarity=0.112 Sum_probs=55.1
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhc-Ccceeecccc----C----cH----HHHHHHHH
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSV-TIPVMAKARI----G----HF----VEAQILEA 112 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~-~iPv~vk~~~----~----~~----~~a~~~~~ 112 (310)
..++.+.+.|+|.+ ++. ...+.........+.+..+++.. ++|+++-.|. | .. +..+.+.+
T Consensus 21 ~~~~~~~~~~~D~v-ElR-----vD~l~~~~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~ 94 (238)
T 1sfl_A 21 IQKINHRIDAIDVL-ELR-----IDQFENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDSYLNLISDLAN 94 (238)
T ss_dssp HHHHHHTTTTCSEE-EEE-----CTTSTTCCHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCCHHHHHHHHHHGGG
T ss_pred HHHHHhhhcCCCEE-EEE-----ecccccCCHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCCHHHHHHHHHHHHH
Confidence 45666777899976 542 11111000000123444556655 7899885442 1 11 22333444
Q ss_pred c-CCCEEEeCCCC--CchhHHHHHHh-cCCCCcEEEecCC----H--HHHH----HHHHhCCCEEEEcC
Q 021575 113 I-GIDYVDESEVL--TPADEENHINK-HNFRIPFVCGCRN----L--GEAL----RRIREGAAMIRTKG 167 (310)
Q Consensus 113 a-Gad~Vi~~~~~--~~~~~~~~i~~-~~~~i~~~v~~~t----~--~ea~----~~~~~Gad~V~v~g 167 (310)
. ++|+|..-... ......+.++. +..+..++++-|+ + ++.. ++.+.|||++++-.
T Consensus 95 ~~~~d~iDvEl~~~~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp~~~el~~~~~~~~~~gaDivKia~ 163 (238)
T 1sfl_A 95 INGIDMIDIEWQADIDIEKHQRIITHLQQYNKEVIISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAV 163 (238)
T ss_dssp CTTCCEEEEECCTTSCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred hCCCCEEEEEccCCCChHHHHHHHHHHHhcCCEEEEEecCCCCCcCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 5 69999532222 22222333332 2345666666653 2 3433 33457999988653
No 440
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=85.83 E-value=1.6 Score=40.43 Aligned_cols=71 Identities=17% Similarity=0.178 Sum_probs=48.4
Q ss_pred HHHHHHHHcCCcEEEecc-CCc-ccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcC-CCEEE
Q 021575 46 EQARVAEEAGACAVMALE-RVP-ADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIG-IDYVD 119 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~-~~~-~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aG-ad~Vi 119 (310)
++++.+++.|++.| ++- ... .......+ ...+.+.++.+++.+++||++...+...+.++.+++.| +|.|.
T Consensus 250 ~la~~L~~~Gvd~i-~vs~g~~~~~~~~~~~--~~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD~V~ 323 (363)
T 3l5l_A 250 ELARRFKAGGLDLL-SVSVGFTIPDTNIPWG--PAFMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQLDLVS 323 (363)
T ss_dssp HHHHHHHHTTCCEE-EEEECCCSSCCCCCCC--TTTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHcCCCEE-EEecCccccccccCCC--cchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCccEEE
Confidence 46889999999987 331 100 00000000 11236788899999999999988776678888888888 99995
No 441
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=85.82 E-value=4.7 Score=37.42 Aligned_cols=45 Identities=9% Similarity=-0.011 Sum_probs=36.4
Q ss_pred cHHHHHHHhhcC-CCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccc
Q 021575 209 PYDLVMQTKQLG-RLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVF 256 (310)
Q Consensus 209 ~~~~i~~i~~~~-~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~ 256 (310)
+++..+++++.+ ++||+ +.+.+ ++.++.++++.| +|.|.+...|.
T Consensus 231 ~~~~~~~l~~~~~~iPIa--~dE~~-~~~~~~~~i~~~~~d~v~ikGGit 277 (389)
T 2oz8_A 231 DHDGLRTLRHAVTWTQIN--SGEYL-DLQGKRLLLEAHAADILNVHGQVT 277 (389)
T ss_dssp CHHHHHHHHHHCCSSEEE--ECTTC-CHHHHHHHHHTTCCSEEEECSCHH
T ss_pred CHHHHHHHHhhCCCCCEE--eCCCC-CHHHHHHHHHcCCCCEEEECcCHH
Confidence 467778888877 89998 67889 999999999876 89999973333
No 442
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=85.75 E-value=6.3 Score=35.56 Aligned_cols=84 Identities=13% Similarity=0.108 Sum_probs=47.8
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc-CCCCEEEeCCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL-GRLPVVHFAAG 230 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~-~~iPVi~iA~G 230 (310)
+....+.|++.+.+.|.++-. .+++.++- .++++.+.+. .++||++ ..|
T Consensus 35 v~~li~~Gv~Gl~v~GtTGE~-------------------~~Lt~~Er----------~~v~~~~v~~~grvpVia-Gvg 84 (313)
T 3dz1_A 35 TDFYAEVGCEGVTVLGILGEA-------------------PKLDAAEA----------EAVATRFIKRAKSMQVIV-GVS 84 (313)
T ss_dssp HHHHHHTTCSEEEESTGGGTG-------------------GGSCHHHH----------HHHHHHHHHHCTTSEEEE-ECC
T ss_pred HHHHHHCCCCEEEeCccCcCh-------------------hhCCHHHH----------HHHHHHHHHHcCCCcEEE-ecC
Confidence 455678899999888764321 22232211 2233333222 4789985 455
Q ss_pred CCCCHHHHH---HHHHcCCCEEEEccccccCCCHHHHHH
Q 021575 231 GVATPADAA---MMMQLGCDGVFVGSGVFKSGDPVKRAQ 266 (310)
Q Consensus 231 GI~t~~d~~---~~l~~GadgV~VGsai~~a~dp~~~a~ 266 (310)
+.++.+-+. .+.++|||++++-...+. ++.....+
T Consensus 85 ~~~t~~ai~la~~A~~~Gadavlv~~P~~~-~s~~~l~~ 122 (313)
T 3dz1_A 85 APGFAAMRRLARLSMDAGAAGVMIAPPPSL-RTDEQITT 122 (313)
T ss_dssp CSSHHHHHHHHHHHHHHTCSEEEECCCTTC-CSHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCC-CCHHHHHH
Confidence 554433333 223579999999988865 45544443
No 443
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=85.67 E-value=1.3 Score=39.89 Aligned_cols=39 Identities=10% Similarity=0.066 Sum_probs=33.4
Q ss_pred HHHHHHHHhhc--CcceeeccccCcHHHHHHHHHcCCCEEE
Q 021575 81 PQLIKEIKQSV--TIPVMAKARIGHFVEAQILEAIGIDYVD 119 (310)
Q Consensus 81 ~~~i~~i~~~~--~iPv~vk~~~~~~~~a~~~~~aGad~Vi 119 (310)
.+.++++++.+ ++||+....+...+++..+.++|||.|-
T Consensus 229 ~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~ 269 (311)
T 1jub_A 229 LANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQ 269 (311)
T ss_dssp HHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 46788888888 8999998888777888888899999994
No 444
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=85.60 E-value=21 Score=32.45 Aligned_cols=181 Identities=13% Similarity=0.102 Sum_probs=104.4
Q ss_pred cCCCHHH----HHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhh-cCcceeeccccC-cHHHHHHHHHcC
Q 021575 41 DVVTPEQ----ARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQS-VTIPVMAKARIG-HFVEAQILEAIG 114 (310)
Q Consensus 41 ~~~~~~~----A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~-~~iPv~vk~~~~-~~~~a~~~~~aG 114 (310)
++.+.+. .+++++.+..-|+++.+. . ..+.|... ....++...+. .++||.+..--+ .++.++.+.++|
T Consensus 24 Nv~n~e~~~Ail~AAee~~sPvIlq~s~g--~-~~y~g~~~--~~~~v~~aa~~~~~VPValHlDHg~~~e~i~~ai~~G 98 (323)
T 2isw_A 24 NVNNMEQIQGIMKAVVQLKSPVILQCSRG--A-LKYSDMIY--LKKLCEAALEKHPDIPICIHLDHGDTLESVKMAIDLG 98 (323)
T ss_dssp ECCSHHHHHHHHHHHHHTTCCEEEEEEHH--H-HHHTTTHH--HHHHHHHHHHHCTTSCEEEEEEEECSHHHHHHHHHTT
T ss_pred eeCCHHHHHHHHHHHHHhCCCEEEECChh--H-HHhCCHHH--HHHHHHHHHHhcCCCcEEEECCCCCCHHHHHHHHHcC
Confidence 4556654 445577788876666311 1 11111100 02344444555 789999864333 567889999999
Q ss_pred CCEEE--eCCCCCch-------hHHHHHHhcCCCCcE--------EE------e--cCCHHHHHHHH-HhCCCEEEEcCC
Q 021575 115 IDYVD--ESEVLTPA-------DEENHINKHNFRIPF--------VC------G--CRNLGEALRRI-REGAAMIRTKGE 168 (310)
Q Consensus 115 ad~Vi--~~~~~~~~-------~~~~~i~~~~~~i~~--------~v------~--~~t~~ea~~~~-~~Gad~V~v~g~ 168 (310)
.+-|- .+. ++.+ ++.++..+ .++.+ .. + .++++++.+-. +.|+|.+.+.-.
T Consensus 99 FtSVMiDgS~-~p~eENi~~Tk~vv~~ah~--~gvsVEaELG~vgg~Ed~v~~~~~yTdPeea~~Fv~~TgvD~LAvaiG 175 (323)
T 2isw_A 99 FSSVMIDASH-HPFDENVRITKEVVAYAHA--RSVSVEAELGTLGGIEEDVQNTVQLTEPQDAKKFVELTGVDALAVAIG 175 (323)
T ss_dssp CSEEEECCTT-SCHHHHHHHHHHHHHHHHT--TTCEEEEEESCC----------CCCCCHHHHHHHHHHHCCSEEEECSS
T ss_pred CCeEEecCCC-CCHHHHHHHHHHHHHHHHH--cCCeEEEEeCCccCCccCcccccccCCHHHHHHHHHHHCCCEEEEecC
Confidence 99993 333 2322 23333322 22211 10 1 26788888866 679999876522
Q ss_pred CCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccC--CcHHHHHHHhhcCCCCEEEeCCC----------------
Q 021575 169 AGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIA--APYDLVMQTKQLGRLPVVHFAAG---------------- 230 (310)
Q Consensus 169 ~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~--~~~~~i~~i~~~~~iPVi~iA~G---------------- 230 (310)
+--| .++... ... -+++.++++++..++|++.=.+.
T Consensus 176 t~HG-----------------~Yk~~~---------~p~~~L~~~~L~~I~~~~~vpLVlHGgSsvp~~~~~~~~~~gg~ 229 (323)
T 2isw_A 176 TSHG-----------------AYKFKS---------ESDIRLAIDRVKTISDLTGIPLVMHGSSSVPKDVKDMINKYGGK 229 (323)
T ss_dssp CCSS-----------------SBCCCC-------------CCCCHHHHHHHHHHCSCEEECSCCCCCHHHHHHHHHTTCC
T ss_pred cccc-----------------ccCCCC---------CcccccCHHHHHHHHHHhCCCeEEECCCCCCHHHHHHHHHhccc
Confidence 1101 111000 111 34677888887778998853333
Q ss_pred -----CCCCHHHHHHHHHcCCCEEEEccccc
Q 021575 231 -----GVATPADAAMMMQLGCDGVFVGSGVF 256 (310)
Q Consensus 231 -----GI~t~~d~~~~l~~GadgV~VGsai~ 256 (310)
|+ ..+++.++++.|..=|=+++.+-
T Consensus 230 ~~~~~Gv-p~e~i~~ai~~GV~KiNi~Tdl~ 259 (323)
T 2isw_A 230 MPDAVGV-PIESIVHAIGEGVCKINVDSDSR 259 (323)
T ss_dssp CTTCBCC-CHHHHHHHHHTTEEEEEECHHHH
T ss_pred cccCCCC-CHHHHHHHHHCCCeEEEEChHHH
Confidence 77 58999999999999999998775
No 445
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=85.53 E-value=11 Score=29.28 Aligned_cols=52 Identities=19% Similarity=0.228 Sum_probs=36.2
Q ss_pred HHHHHHHhhc---CCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHH
Q 021575 210 YDLVMQTKQL---GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAI 268 (310)
Q Consensus 210 ~~~i~~i~~~---~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l 268 (310)
+++++++++. .++||+.+ .+-.+.++..+++++|+++.+ .|.-+|....+.+
T Consensus 73 ~el~~~ir~~~~~~~ipvI~l--Ta~~~~~~~~~~~~~Ga~~yl-----~KP~~~~~L~~~i 127 (134)
T 3to5_A 73 IDLLKNIRADEELKHLPVLMI--TAEAKREQIIEAAQAGVNGYI-----VKPFTAATLKEKL 127 (134)
T ss_dssp HHHHHHHHHSTTTTTCCEEEE--ESSCCHHHHHHHHHTTCCEEE-----ESSCCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCeEEEE--ECCCCHHHHHHHHHCCCCEEE-----ECCCCHHHHHHHH
Confidence 6677777643 46999865 555689999999999999986 5533454443333
No 446
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=85.51 E-value=1.9 Score=38.77 Aligned_cols=50 Identities=18% Similarity=0.265 Sum_probs=32.8
Q ss_pred CCCCEEEeCCCCCCCHHHHH---HHHHcCCCEEEEccccccCCCHHHHHHHHHH
Q 021575 220 GRLPVVHFAAGGVATPADAA---MMMQLGCDGVFVGSGVFKSGDPVKRAQAIVR 270 (310)
Q Consensus 220 ~~iPVi~iA~GGI~t~~d~~---~~l~~GadgV~VGsai~~a~dp~~~a~~l~~ 270 (310)
.++||++ ..|+.++.+.+. .+.++|||++++....+-.+++....+-|..
T Consensus 72 grvpvia-Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ 124 (300)
T 3eb2_A 72 RRVPVVA-GVASTSVADAVAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRA 124 (300)
T ss_dssp TSSCBEE-EEEESSHHHHHHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHH
T ss_pred CCCcEEE-eCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHH
Confidence 4689985 445554444333 2336799999999999977776655553333
No 447
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=85.48 E-value=2.5 Score=38.90 Aligned_cols=70 Identities=14% Similarity=0.150 Sum_probs=48.1
Q ss_pred HHHHHHHHcCCcEEEecc-CCcccccccCCC----CCCCCHHHHHHHHhhc-CcceeeccccCcHHHHHHHHHcCCCEEE
Q 021575 46 EQARVAEEAGACAVMALE-RVPADIRSQGGV----ARMSDPQLIKEIKQSV-TIPVMAKARIGHFVEAQILEAIGIDYVD 119 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~-~~~~~~~~~~G~----~~~~~~~~i~~i~~~~-~iPv~vk~~~~~~~~a~~~~~aGad~Vi 119 (310)
+.++.++++|+++| .+. +... . ...|. ....+.+.++++++.+ ++||++...+...++++.+.+ |||+|.
T Consensus 148 ~~a~~l~~aG~d~I-~V~~r~~~-~-g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-GaD~V~ 223 (350)
T 3b0p_A 148 QSVEAMAEAGVKVF-VVHARSAL-L-ALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RVDGVM 223 (350)
T ss_dssp HHHHHHHHTTCCEE-EEECSCBC------------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TSSEEE
T ss_pred HHHHHHHHcCCCEE-EEecCchh-c-ccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CCCEEE
Confidence 67899999999998 332 1100 0 00111 0012468899999998 999999988877788888887 999995
No 448
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=85.41 E-value=2 Score=41.00 Aligned_cols=84 Identities=14% Similarity=0.077 Sum_probs=48.6
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHH-------HHHHHHh---h--cCcceeeccccCcHHHHHHHHH-
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQ-------LIKEIKQ---S--VTIPVMAKARIGHFVEAQILEA- 112 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~-------~i~~i~~---~--~~iPv~vk~~~~~~~~a~~~~~- 112 (310)
+.|+.+.+.||+.| |++...+.. |.......+ .++.+++ . +++|+.+..+ ..+.++.+.+
T Consensus 216 ~~A~~mv~~GAdII-DIGgeSTrP----Ga~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT~--~~~VaeaAL~~ 288 (442)
T 3mcm_A 216 LNLDELIQSGAEII-DIGAESTKP----DAKPISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDTR--KLEVMQKILAK 288 (442)
T ss_dssp HHHHHHHHHTCSEE-EEECCCCCC--------CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEECC--CHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEE-EECCCCCCC----CCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCC--CHHHHHHHHhh
Confidence 67889999999965 875222211 111111122 3444555 2 3788888765 3477888888
Q ss_pred -cCCCE-EE-eCCCCCchhHHHHHHhcC
Q 021575 113 -IGIDY-VD-ESEVLTPADEENHINKHN 137 (310)
Q Consensus 113 -aGad~-Vi-~~~~~~~~~~~~~i~~~~ 137 (310)
+|++. |- ++. ....+..+.+++++
T Consensus 289 ~aGa~i~INDVsg-~~d~~m~~v~a~~g 315 (442)
T 3mcm_A 289 HHDIIWMINDVEC-NNIEQKAQLIAKYN 315 (442)
T ss_dssp HGGGCCEEEECCC-TTHHHHHHHHHHHT
T ss_pred CCCCCEEEEcCCC-CCChHHHHHHHHhC
Confidence 99999 73 333 33445555555443
No 449
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=85.34 E-value=9.5 Score=28.26 Aligned_cols=60 Identities=17% Similarity=0.144 Sum_probs=40.4
Q ss_pred HHHHHHHhhc---CCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhccC
Q 021575 210 YDLVMQTKQL---GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHYS 276 (310)
Q Consensus 210 ~~~i~~i~~~---~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~~ 276 (310)
+++++.+++. .++|++++ .+-.+.+...++++.|+++++ .+.-++....+.+...++.+.
T Consensus 71 ~~~~~~l~~~~~~~~~pii~l--s~~~~~~~~~~~~~~g~~~~l-----~kP~~~~~l~~~i~~~~~~~~ 133 (140)
T 1k68_A 71 REVLAEIKSDPTLKRIPVVVL--STSINEDDIFHSYDLHVNCYI-----TKSANLSQLFQIVKGIEEFWL 133 (140)
T ss_dssp HHHHHHHHHSTTGGGSCEEEE--ESCCCHHHHHHHHHTTCSEEE-----ECCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCcccccccEEEE--ecCCcHHHHHHHHHhchhhee-----cCCCCHHHHHHHHHHHHHHHc
Confidence 5667777664 36899865 444578899999999999986 444456655555555554443
No 450
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=85.30 E-value=7.3 Score=35.24 Aligned_cols=85 Identities=14% Similarity=0.131 Sum_probs=46.9
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAA 229 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~ 229 (310)
+....+.|++.+.+.|.++-. .+++.++- .++++.+.+. .++||++ ..
T Consensus 38 v~~li~~Gv~gl~v~GtTGE~-------------------~~Ls~~Er----------~~v~~~~~~~~~grvpvia-Gv 87 (318)
T 3qfe_A 38 YAYLARSGLTGLVILGTNAEA-------------------FLLTREER----------AQLIATARKAVGPDFPIMA-GV 87 (318)
T ss_dssp HHHHHTTTCSEEEESSGGGTG-------------------GGSCHHHH----------HHHHHHHHHHHCTTSCEEE-EC
T ss_pred HHHHHHcCCCEEEeCccccCh-------------------hhCCHHHH----------HHHHHHHHHHhCCCCcEEE-eC
Confidence 445667899999888764421 22232211 1233333222 4799985 45
Q ss_pred CCCCCHHHHH---HHHHcCCCEEEEccccccC--CCHHHHHH
Q 021575 230 GGVATPADAA---MMMQLGCDGVFVGSGVFKS--GDPVKRAQ 266 (310)
Q Consensus 230 GGI~t~~d~~---~~l~~GadgV~VGsai~~a--~dp~~~a~ 266 (310)
|+-++.+.+. .+.++|||++++-...|-. .++....+
T Consensus 88 g~~~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~ 129 (318)
T 3qfe_A 88 GAHSTRQVLEHINDASVAGANYVLVLPPAYFGKATTPPVIKS 129 (318)
T ss_dssp CCSSHHHHHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHH
Confidence 6654444333 2235799999999995532 24444444
No 451
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=85.12 E-value=5.7 Score=36.90 Aligned_cols=107 Identities=9% Similarity=-0.031 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCCEE-E--eCCCCCchhHHHHHHh-cCCCCcEEEecC---CHHHHHHHHHh----CCCEEEEcCCCCCcc
Q 021575 105 VEAQILEAIGIDYV-D--ESEVLTPADEENHINK-HNFRIPFVCGCR---NLGEALRRIRE----GAAMIRTKGEAGTGN 173 (310)
Q Consensus 105 ~~a~~~~~aGad~V-i--~~~~~~~~~~~~~i~~-~~~~i~~~v~~~---t~~ea~~~~~~----Gad~V~v~g~~~~~~ 173 (310)
+.++.+.+.|.+.+ + +.+.....+..+.+++ .+.++.+.+++| +.+++.+..+. |.+++----.
T Consensus 157 ~~a~~~~~~G~~~iKiKvG~~~~~d~~~v~avR~a~g~d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEqP~~----- 231 (389)
T 3ozy_A 157 DELAGWVEQGFTAAKLKVGRAPRKDAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEAGCYWFEEPLS----- 231 (389)
T ss_dssp HHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSEEESCSC-----
T ss_pred HHHHHHHHCCCCEEeeccCCCHHHHHHHHHHHHHHcCCCceEEEECCCCcCHHHHHHHHHHHHhcCCCEEECCCC-----
Q ss_pred hHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHh-hcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEE
Q 021575 174 IIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTK-QLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFV 251 (310)
Q Consensus 174 ~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~-~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~V 251 (310)
..+++.+++++ +.+++||+ +.+.+.++.++.++++.| +|.|.+
T Consensus 232 ---------------------------------~~d~~~~~~l~~~~~~iPIa--~dE~i~~~~~~~~~i~~~~~d~v~i 276 (389)
T 3ozy_A 232 ---------------------------------IDDIEGHRILRAQGTPVRIA--TGENLYTRNAFNDYIRNDAIDVLQA 276 (389)
T ss_dssp ---------------------------------TTCHHHHHHHHTTCCSSEEE--ECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred ---------------------------------cccHHHHHHHHhcCCCCCEE--eCCCCCCHHHHHHHHHcCCCCEEEe
No 452
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=84.97 E-value=3.3 Score=39.80 Aligned_cols=110 Identities=15% Similarity=0.165 Sum_probs=69.9
Q ss_pred HHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEEeCC--
Q 021575 45 PEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESE-- 122 (310)
Q Consensus 45 ~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi~~~-- 122 (310)
.+.+..+.+.|++.+ ..+ .. +|- .....+.++.+++.+++|++++... ..+.++.+. |+|.|....
T Consensus 230 ~~~a~~l~~~gvd~l-vvd------ta-~G~-~~~~L~~I~~l~~~~~vpvi~k~v~-~~~~a~~l~--G~d~v~vg~g~ 297 (486)
T 2cu0_A 230 IKRAIELDKAGVDVI-VVD------TA-HAH-NLKAIKSMKEMRQKVDADFIVGNIA-NPKAVDDLT--FADAVKVGIGP 297 (486)
T ss_dssp HHHHHHHHHTTCSEE-EEE------CS-CCC-CHHHHHHHHHHHHTCCSEEEEEEEC-CHHHHTTCT--TSSEEEECSSC
T ss_pred HHHHHHHHHhcCCce-EEE------ec-CCc-EeehhhHHHHHHHHhCCccccCCcC-CHHHHHHhh--CCCeEEEeeee
Confidence 467778889999976 221 11 111 1112567778888889999987653 345555555 999995311
Q ss_pred ------------CCCch----hHHHHHHhcCCCCcEEE--ecCCHHHHHHHHHhCCCEEEEcCC
Q 021575 123 ------------VLTPA----DEENHINKHNFRIPFVC--GCRNLGEALRRIREGAAMIRTKGE 168 (310)
Q Consensus 123 ------------~~~~~----~~~~~i~~~~~~i~~~v--~~~t~~ea~~~~~~Gad~V~v~g~ 168 (310)
..... ++.+...+ .++++++ ++.+..++.++..+||+.|.+...
T Consensus 298 g~~~~~r~~~~~g~~~~~~l~~~~~~~~~--~~vpVia~GGi~~~~di~kalalGA~~v~~g~~ 359 (486)
T 2cu0_A 298 GSICTTRIVAGVGVPQITAVAMVADRAQE--YGLYVIADGGIRYSGDIVKAIAAGADAVMLGNL 359 (486)
T ss_dssp STTBCHHHHTCCCCCHHHHHHHHHHHHHH--HTCEEEEESCCCSHHHHHHHHHTTCSEEEESTT
T ss_pred ccceeeeEEeecCcchHHHHHHHHHHHHH--cCCcEEecCCCCCHHHHHHHHHcCCCceeeChh
Confidence 01111 11222222 3677877 589999999999999999998653
No 453
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=84.93 E-value=11 Score=34.22 Aligned_cols=41 Identities=17% Similarity=0.125 Sum_probs=34.2
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEE
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFV 251 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~V 251 (310)
+++..+++++..++||+ +...+.++.++.++++.| +|.|.+
T Consensus 223 ~~~~~~~l~~~~~ipia--~dE~~~~~~~~~~~i~~~~~d~v~i 264 (345)
T 2zad_A 223 DIEGLKFVRFHSPFPVA--ADESARTKFDVMRLVKEEAVDYVNI 264 (345)
T ss_dssp CHHHHHHHHHHSSSCEE--ESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred cHHHHHHHHHhCCCCEE--EeCCcCCHHHHHHHHHhCCCCEEEE
Confidence 36677788877889998 678899999999999776 888887
No 454
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=84.86 E-value=20 Score=31.64 Aligned_cols=172 Identities=15% Similarity=0.112 Sum_probs=89.5
Q ss_pred cceeeccccCc---HHHHHHHHHcCCCEEE--eCC----CCCchhHH---HHHHhcCCCCcEEEecCCHHHHHH----HH
Q 021575 93 IPVMAKARIGH---FVEAQILEAIGIDYVD--ESE----VLTPADEE---NHINKHNFRIPFVCGCRNLGEALR----RI 156 (310)
Q Consensus 93 iPv~vk~~~~~---~~~a~~~~~aGad~Vi--~~~----~~~~~~~~---~~i~~~~~~i~~~v~~~t~~ea~~----~~ 156 (310)
+|+- ...++. ...++-+.+.|+|+++ ++- .++.+|-. +...+.-.++.+.++.++.+++.+ +.
T Consensus 9 TPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~gvi~Gvg~~~t~~ai~la~~A~ 87 (286)
T 2r91_A 9 TTFR-GGRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARRVIVQVASLNADEAIALAKYAE 87 (286)
T ss_dssp CCEE-TTEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSSEEEECCCSSHHHHHHHHHHHH
T ss_pred cCcC-CCccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCEEEeeCCCCHHHHHHHHHHHH
Confidence 4555 434432 2445667789999985 332 24444443 333332223556666666655444 55
Q ss_pred HhCCCEEEEcCCCCC--cchHHHHHHHHhhccc----eE--eecc-----cChhHHHHh-----hhccCCcHHHHHHHhh
Q 021575 157 REGAAMIRTKGEAGT--GNIIEAVRHVRSVMGD----IR--VLRN-----MDDDEVFTF-----AKKIAAPYDLVMQTKQ 218 (310)
Q Consensus 157 ~~Gad~V~v~g~~~~--~~~~~~~~~~r~~~~~----~~--~l~~-----~~~d~~~~~-----~~~~~~~~~~i~~i~~ 218 (310)
++|+|.+.+..+.|. .+-....++.+..... +- .+|. ++++.+.+. .|+...+...+.++.+
T Consensus 88 ~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~~pnivgiKds~gd~~~~~~~~~ 167 (286)
T 2r91_A 88 SRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVSIPVFLYNYPAAVGRDVDARAAKELGCIRGVKDTNESLAHTLAYKR 167 (286)
T ss_dssp HTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSSCCCHHHHHHHSCEEEEEECCSCHHHHHHHHH
T ss_pred hcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeChhhcCCCCCHHHHHhcCCEEEEEeCCCCHHHHHHHHh
Confidence 689999887766543 2334556666553322 22 2221 233333220 1233344444444443
Q ss_pred c-CCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhcc
Q 021575 219 L-GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTHY 275 (310)
Q Consensus 219 ~-~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~~ 275 (310)
. .+..|+ .|- -+.+...+..|++|++-+.+-+- |.... ++.++++++
T Consensus 168 ~~~~f~v~----~G~--d~~~~~~l~~G~~G~is~~an~~---P~~~~-~l~~a~~~G 215 (286)
T 2r91_A 168 YLPQARVY----NGS--DSLVFASFAVRLDGVVASSANYL---PELLA-GIRDAVAAG 215 (286)
T ss_dssp HCTTSEEE----ECC--GGGHHHHHHTTCSEECCGGGTTC---HHHHH-HHHHHHHTT
T ss_pred cCCCEEEE----Ecc--HHHHHHHHHcCCCEEEecHHHhC---HHHHH-HHHHHHHCC
Confidence 1 134443 343 34566778899999998876552 54333 355555543
No 455
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=84.75 E-value=21 Score=34.82 Aligned_cols=169 Identities=15% Similarity=0.081 Sum_probs=88.5
Q ss_pred HHHHHHHHcCCcEEEecc-CCcccc--cccCCCCCCCCHHHHHHHHhh-cCcceeeccc----cCc--------HHHHHH
Q 021575 46 EQARVAEEAGACAVMALE-RVPADI--RSQGGVARMSDPQLIKEIKQS-VTIPVMAKAR----IGH--------FVEAQI 109 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~-~~~~~~--~~~~G~~~~~~~~~i~~i~~~-~~iPv~vk~~----~~~--------~~~a~~ 109 (310)
+++..+.+.|.+.| +.- |...+. +.. .....+.++++++. -+.++.+-.+ .++ ..+++.
T Consensus 51 ~Ia~~L~~~Gv~~I-E~G~patF~~~~rfl----~~d~~e~lr~l~~~~~~~~l~~L~R~~N~~G~~~ypddv~~~~ve~ 125 (539)
T 1rqb_A 51 GACADIDAAGYWSV-ECWGGATYDSCIRFL----NEDPWERLRTFRKLMPNSRLQMLLRGQNLLGYRHYNDEVVDRFVDK 125 (539)
T ss_dssp GGHHHHHHTTCSEE-EEEETTHHHHHHHTS----CCCHHHHHHHHHHHCTTSCEEEEECGGGTTSSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEE-EeCcccccccchhcc----CCCHHHHHHHHHHhCCCCEEEEEeccccccCcccCcccccHHHHHH
Confidence 57999999999976 331 110000 000 12235677777764 3555554332 121 345788
Q ss_pred HHHcCCCEEEeCCCCC----chhHHHHHHhcCCCCcEEEec-----CCHHH----HHHHHHhCCCEEEEcCCCCCcchHH
Q 021575 110 LEAIGIDYVDESEVLT----PADEENHINKHNFRIPFVCGC-----RNLGE----ALRRIREGAAMIRTKGEAGTGNIIE 176 (310)
Q Consensus 110 ~~~aGad~Vi~~~~~~----~~~~~~~i~~~~~~i~~~v~~-----~t~~e----a~~~~~~Gad~V~v~g~~~~~~~~~ 176 (310)
+.++|+|.|.+-...+ ..+.++.+++.+..+...+++ .+.+. +.++.++|++.|.+-=..+...
T Consensus 126 a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~--- 202 (539)
T 1rqb_A 126 SAENGMDVFRVFDAMNDPRNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGADSIALKDMAALLK--- 202 (539)
T ss_dssp HHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEEEEETTCCCC---
T ss_pred HHhCCCCEEEEEEehhHHHHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEEEeCCCCCCcC---
Confidence 9999999995333222 223344444444433223332 24433 4445677998877542211111
Q ss_pred HHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcC--CCCEEE--eCCCCCCCHHHHHHHHHcCCCEEEEc
Q 021575 177 AVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG--RLPVVH--FAAGGVATPADAAMMMQLGCDGVFVG 252 (310)
Q Consensus 177 ~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~--~iPVi~--iA~GGI~t~~d~~~~l~~GadgV~VG 252 (310)
|.. ..++++.+++.. ++|+-+ =-..|. ...+...++++||+.|-..
T Consensus 203 -------------------P~~----------v~~lv~~l~~~~p~~i~I~~H~Hnd~Gl-AvAN~laAveAGa~~VD~t 252 (539)
T 1rqb_A 203 -------------------PQP----------AYDIIKAIKDTYGQKTQINLHCHSTTGV-TEVSLMKAIEAGVDVVDTA 252 (539)
T ss_dssp -------------------HHH----------HHHHHHHHHHHHCTTCCEEEEEBCTTSC-HHHHHHHHHHTTCSEEEEB
T ss_pred -------------------HHH----------HHHHHHHHHHhcCCCceEEEEeCCCCCh-HHHHHHHHHHhCCCEEEEe
Confidence 111 133455555443 566532 035677 3677888889999977543
No 456
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=84.73 E-value=6.3 Score=34.74 Aligned_cols=107 Identities=11% Similarity=0.189 Sum_probs=68.2
Q ss_pred HHHHHHHHcCCCEEE-eCCC--CCc-------hhHHHHHHh--cCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCc
Q 021575 105 VEAQILEAIGIDYVD-ESEV--LTP-------ADEENHINK--HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG 172 (310)
Q Consensus 105 ~~a~~~~~aGad~Vi-~~~~--~~~-------~~~~~~i~~--~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~ 172 (310)
+.++.+.++|+|.|- .+.. .++ .+-.+.+++ ...+++++.++++...+..+.+. +|++.+..+.
T Consensus 41 ~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~-vd~~kIga~~--- 116 (262)
T 1zco_A 41 KVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYGLVTVTEVMDTRHVELVAKY-SDILQIGARN--- 116 (262)
T ss_dssp HHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHH-CSEEEECGGG---
T ss_pred HHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhh-CCEEEECccc---
Confidence 556777788998884 2110 111 222223322 34689999999999888888888 9999886431
Q ss_pred chHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCCC-CHHHHHHHHH----cCC-
Q 021575 173 NIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVA-TPADAAMMMQ----LGC- 246 (310)
Q Consensus 173 ~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI~-t~~d~~~~l~----~Ga- 246 (310)
...+.+++++.+ .+.||++ .-|.. |++++..+.+ .|.
T Consensus 117 ----------------------------------~~n~~ll~~~a~-~~kPV~l--k~G~~~t~~e~~~Av~~i~~~Gn~ 159 (262)
T 1zco_A 117 ----------------------------------SQNFELLKEVGK-VENPVLL--KRGMGNTIQELLYSAEYIMAQGNE 159 (262)
T ss_dssp ----------------------------------TTCHHHHHHHTT-SSSCEEE--ECCTTCCHHHHHHHHHHHHTTTCC
T ss_pred ----------------------------------ccCHHHHHHHHh-cCCcEEE--ecCCCCCHHHHHHHHHHHHHCCCC
Confidence 123556777776 6789983 56665 8888877763 465
Q ss_pred CEEEEc
Q 021575 247 DGVFVG 252 (310)
Q Consensus 247 dgV~VG 252 (310)
+.+++=
T Consensus 160 ~i~L~~ 165 (262)
T 1zco_A 160 NVILCE 165 (262)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 444443
No 457
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=84.71 E-value=5.4 Score=36.77 Aligned_cols=74 Identities=16% Similarity=0.135 Sum_probs=56.5
Q ss_pred CCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHH
Q 021575 137 NFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQT 216 (310)
Q Consensus 137 ~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i 216 (310)
..|+.++.++.+.+.+..+.+.|++++.+..+. -..+.+++.+
T Consensus 89 ~~Gi~~~st~fD~~svd~l~~~~v~~~KI~S~~-------------------------------------~~N~pLL~~v 131 (350)
T 3g8r_A 89 ANGFKAICTPFDEESVDLIEAHGIEIIKIASCS-------------------------------------FTDWPLLERI 131 (350)
T ss_dssp HTTCEEEEEECSHHHHHHHHHTTCCEEEECSSS-------------------------------------TTCHHHHHHH
T ss_pred HcCCcEEeccCCHHHHHHHHHcCCCEEEECccc-------------------------------------ccCHHHHHHH
Confidence 468999999999999999999999999986431 1246688888
Q ss_pred hhcCCCCEEEeCCCCCCCHHHHHHHHH----cCCCEEE
Q 021575 217 KQLGRLPVVHFAAGGVATPADAAMMMQ----LGCDGVF 250 (310)
Q Consensus 217 ~~~~~iPVi~iA~GGI~t~~d~~~~l~----~GadgV~ 250 (310)
.+ .+.||+ .+-|.+|.+++..+.+ .|.+-++
T Consensus 132 a~-~gKPvi--LstGmstl~Ei~~Ave~i~~~g~~viL 166 (350)
T 3g8r_A 132 AR-SDKPVV--ASTAGARREDIDKVVSFMLHRGKDLTI 166 (350)
T ss_dssp HT-SCSCEE--EECTTCCHHHHHHHHHHHHTTTCCEEE
T ss_pred Hh-hCCcEE--EECCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 87 578999 4677789999887763 4666444
No 458
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=84.67 E-value=10 Score=35.63 Aligned_cols=42 Identities=5% Similarity=-0.016 Sum_probs=34.9
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEc
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVG 252 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VG 252 (310)
+++.++++++.+++||+ +...+.++.++.++++.| +|.|.+-
T Consensus 269 d~~~~~~l~~~~~iPIa--~dE~~~~~~~~~~li~~~a~D~v~ik 311 (412)
T 3stp_A 269 DVAGYAELNAMNIVPIS--GGEHEFSVIGCAELINRKAVSVLQYD 311 (412)
T ss_dssp CHHHHHHHHHTCSSCEE--ECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred cHHHHHHHHhCCCCCEE--eCCCCCCHHHHHHHHHcCCCCEEecC
Confidence 46778888888899998 678899999999999876 7777653
No 459
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=84.46 E-value=4.6 Score=37.25 Aligned_cols=46 Identities=15% Similarity=0.209 Sum_probs=37.8
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccc
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVF 256 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~ 256 (310)
+++..+++++..++||+ +.+.+.+++++.++++.| +|.|++--.-.
T Consensus 225 d~~~~~~l~~~~~iPI~--~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 271 (378)
T 2qdd_A 225 TLDQCAHVARRVANPIM--LDECLHEFSDHLAAWSRGACEGVKIKPNRV 271 (378)
T ss_dssp SHHHHHHHHTTCCSCEE--ECTTCCSHHHHHHHHHHTCCSEEEECHHHH
T ss_pred CHHHHHHHHHhCCCCEE--ECCCcCCHHHHHHHHHhCCCCEEEeccccc
Confidence 67788888888899998 678899999999999665 89998854443
No 460
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=84.46 E-value=1.3 Score=41.19 Aligned_cols=140 Identities=16% Similarity=0.218 Sum_probs=80.0
Q ss_pred hcCcceeecccc-Cc-------HHHHHHHHHcCCCEEEeCC--CCCchhH---HHHHHhcCCCCcEEE--ec------CC
Q 021575 90 SVTIPVMAKARI-GH-------FVEAQILEAIGIDYVDESE--VLTPADE---ENHINKHNFRIPFVC--GC------RN 148 (310)
Q Consensus 90 ~~~iPv~vk~~~-~~-------~~~a~~~~~aGad~Vi~~~--~~~~~~~---~~~i~~~~~~i~~~v--~~------~t 148 (310)
....|+.+.--. +. ...++.+.+.|+-..+++. .++.+++ .+.+++..++.+++. .+ .+
T Consensus 57 ~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~~~s~~~vr~~ap~~~~~anlg~~ql~~~~~ 136 (368)
T 3vkj_A 57 EISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEARESFAIVRKVAPTIPIIANLGMPQLVKGYG 136 (368)
T ss_dssp EESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGGSHHHHHHHHHCSSSCEEEEEEGGGGGTTCC
T ss_pred eccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHHHhhHHHHHHhCcCcceecCcCeeecCCCCC
Confidence 357788775321 22 1247888889999887443 2211211 122343345554443 23 45
Q ss_pred HHHHHHHHH-hCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccC-CcHHHHHHHhhcCCCCEEE
Q 021575 149 LGEALRRIR-EGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIA-APYDLVMQTKQLGRLPVVH 226 (310)
Q Consensus 149 ~~ea~~~~~-~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~-~~~~~i~~i~~~~~iPVi~ 226 (310)
.+++.++.+ .+++.+.+|-... . +.+. +.-+ ++.. ..++.++.+++..++||++
T Consensus 137 ~~~~~~av~~~~a~al~Ihln~~----~---~~~~---------p~g~--------~~~~~~~~~~i~~i~~~~~vPViv 192 (368)
T 3vkj_A 137 LKEFQDAIQMIEADAIAVHLNPA----Q---EVFQ---------PEGE--------PEYQIYALEKLRDISKELSVPIIV 192 (368)
T ss_dssp HHHHHHHHHHTTCSEEEEECCHH----H---HHHS---------SSCC--------CBCBTHHHHHHHHHHTTCSSCEEE
T ss_pred HHHHHHHHHHhcCCCeEEEecch----h---hhhC---------CCCC--------chhhHHHHHHHHHHHHHcCCCEEE
Confidence 677877654 5777777763210 0 0000 0000 0011 1366788888888999985
Q ss_pred -eCCCCCCCHHHHHHHHHcCCCEEEEccc
Q 021575 227 -FAAGGVATPADAAMMMQLGCDGVFVGSG 254 (310)
Q Consensus 227 -iA~GGI~t~~d~~~~l~~GadgV~VGsa 254 (310)
...+|+ +++++..+.++|+|+|.|+..
T Consensus 193 K~vG~g~-s~~~A~~l~~aGad~I~V~g~ 220 (368)
T 3vkj_A 193 KESGNGI-SMETAKLLYSYGIKNFDTSGQ 220 (368)
T ss_dssp ECSSSCC-CHHHHHHHHHTTCCEEECCCB
T ss_pred EeCCCCC-CHHHHHHHHhCCCCEEEEeCC
Confidence 114555 799999999999999999543
No 461
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=84.36 E-value=2.4 Score=35.91 Aligned_cols=75 Identities=25% Similarity=0.215 Sum_probs=49.0
Q ss_pred cCCCHHHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEE
Q 021575 41 DVVTPEQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVD 119 (310)
Q Consensus 41 ~~~~~~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi 119 (310)
++.+++.++.+.+.|+|.+ .+.+........++. ....+.++++++.+++|+++-..++ .+.+..+.++|+++|.
T Consensus 116 sv~t~~~~~~a~~~gaD~i-~~~~~f~~~~~~g~~--~~~~~~l~~~~~~~~~pvia~GGI~-~~nv~~~~~~Ga~gv~ 190 (221)
T 1yad_A 116 SVHSLEEAVQAEKEDADYV-LFGHVFETDCKKGLE--GRGVSLLSDIKQRISIPVIAIGGMT-PDRLRDVKQAGADGIA 190 (221)
T ss_dssp EECSHHHHHHHHHTTCSEE-EEECCC------------CHHHHHHHHHHHCCSCEEEESSCC-GGGHHHHHHTTCSEEE
T ss_pred EcCCHHHHHHHHhCCCCEE-EECCccccCCCCCCC--CCCHHHHHHHHHhCCCCEEEECCCC-HHHHHHHHHcCCCEEE
Confidence 5667888898999999987 443221000000101 1125678888777899999877774 4677888889999995
No 462
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=84.35 E-value=16 Score=31.97 Aligned_cols=114 Identities=11% Similarity=0.021 Sum_probs=58.4
Q ss_pred HHHHHHHcCCcEEEeccCCcccccccCCCC-CCCCHHHHHHHHhhc-Ccceeecccc---------Cc----HHHHHHHH
Q 021575 47 QARVAEEAGACAVMALERVPADIRSQGGVA-RMSDPQLIKEIKQSV-TIPVMAKARI---------GH----FVEAQILE 111 (310)
Q Consensus 47 ~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~-~~~~~~~i~~i~~~~-~iPv~vk~~~---------~~----~~~a~~~~ 111 (310)
.+..+.+.|+|.+ ++. .+.+.... .....+.+..+++.+ ++|+++-.|. .. .+..+.+.
T Consensus 37 ~~~~~~~~~~D~v-ElR-----vD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~~ll~~~~ 110 (257)
T 2yr1_A 37 EAEEVCRKQPDLL-EWR-----ADFFRAIDDQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLNEAEVRRLIEAIC 110 (257)
T ss_dssp HHHHHHHSCCSEE-EEE-----GGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSCHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCEE-EEE-----eecccccCcHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCCHHHHHHHHHHHH
Confidence 4556677899976 542 11111000 000123555677776 8999985432 11 23345556
Q ss_pred HcC-CCEEEeCCCCCchhHHHHHHh-cCCCCcEEEecCC----H--HHH----HHHHHhCCCEEEEcC
Q 021575 112 AIG-IDYVDESEVLTPADEENHINK-HNFRIPFVCGCRN----L--GEA----LRRIREGAAMIRTKG 167 (310)
Q Consensus 112 ~aG-ad~Vi~~~~~~~~~~~~~i~~-~~~~i~~~v~~~t----~--~ea----~~~~~~Gad~V~v~g 167 (310)
+.| +|+|..-..... .+.+.++. +..+..++++-|+ + ++. .++.+.|||++++-.
T Consensus 111 ~~g~~d~iDvEl~~~~-~~~~l~~~~~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~gaDivKia~ 177 (257)
T 2yr1_A 111 RSGAIDLVDYELAYGE-RIADVRRMTEECSVWLVVSRHYFDGTPRKETLLADMRQAERYGADIAKVAV 177 (257)
T ss_dssp HHTCCSEEEEEGGGTT-HHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HcCCCCEEEEECCCCh-hHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHHHHHHhcCCCEEEEEe
Confidence 678 999952211111 33333332 2345666666653 2 333 234567999988653
No 463
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=84.28 E-value=12 Score=34.13 Aligned_cols=43 Identities=12% Similarity=0.084 Sum_probs=35.2
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEcc
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGS 253 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGs 253 (310)
+++.++++++..++||+ +...+.++.++.++++.| +|.|.+--
T Consensus 222 d~~~~~~l~~~~~iPIa--~dE~~~~~~~~~~~l~~~~~d~v~~k~ 265 (354)
T 3jva_A 222 DLEGLKYVTSQVNTTIM--ADESCFDAQDALELVKKGTVDVINIKL 265 (354)
T ss_dssp CHHHHHHHHHHCSSEEE--ESTTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred hHHHHHHHHHhCCCCEE--EcCCcCCHHHHHHHHHcCCCCEEEECc
Confidence 46677888887889998 678899999999999764 78888753
No 464
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=84.27 E-value=12 Score=34.38 Aligned_cols=41 Identities=20% Similarity=0.160 Sum_probs=34.1
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEE
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFV 251 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~V 251 (310)
+++.++++++..++||. +...+.++.++.++++.| +|.|.+
T Consensus 224 d~~~~~~l~~~~~iPIa--~dE~~~~~~~~~~~i~~~~~d~v~~ 265 (367)
T 3dg3_A 224 DVLSRRRLVGQLDMPFI--ADESVPTPADVTREVLGGSATAISI 265 (367)
T ss_dssp SHHHHHHHHHHCSSCEE--ECTTCSSHHHHHHHHHHTSCSEEEE
T ss_pred cHHHHHHHHHhCCCCEE--ecCCcCCHHHHHHHHHcCCCCEEEe
Confidence 36667788887889998 678999999999999776 788876
No 465
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=84.20 E-value=1.4 Score=36.83 Aligned_cols=74 Identities=28% Similarity=0.333 Sum_probs=48.5
Q ss_pred cCCCHHHHHHHHHcCCcEEEeccC-CcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEE
Q 021575 41 DVVTPEQARVAEEAGACAVMALER-VPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVD 119 (310)
Q Consensus 41 ~~~~~~~A~~~~~~Ga~~i~~L~~-~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi 119 (310)
++.+++.+..+.+.|++.+ .+++ .++..+. | ......+.++++++.+++|+++...++ .+.+..+.++|+|+|.
T Consensus 114 ~~~t~~e~~~~~~~g~d~i-~~~~~~~~~~~~--~-~~~~~~~~l~~l~~~~~~pvia~GGI~-~~nv~~~~~~Ga~gv~ 188 (215)
T 1xi3_A 114 SVYSLEEALEAEKKGADYL-GAGSVFPTKTKE--D-ARVIGLEGLRKIVESVKIPVVAIGGIN-KDNAREVLKTGVDGIA 188 (215)
T ss_dssp EESSHHHHHHHHHHTCSEE-EEECSSCC------C-CCCCHHHHHHHHHHHCSSCEEEESSCC-TTTHHHHHTTTCSEEE
T ss_pred ecCCHHHHHHHHhcCCCEE-EEcCCccCCCCC--C-CCCcCHHHHHHHHHhCCCCEEEECCcC-HHHHHHHHHcCCCEEE
Confidence 3567776777888999987 3332 1111111 1 112235778888877899999977766 4667778889999996
No 466
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=84.09 E-value=14 Score=32.69 Aligned_cols=88 Identities=14% Similarity=0.138 Sum_probs=50.5
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGG 231 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GG 231 (310)
+....+.|++.+.+.|.++-. .+++.++ -.++++.+.+..+- |++ ..|+
T Consensus 25 v~~li~~Gv~gl~v~GttGE~-------------------~~Ls~~E----------r~~v~~~~~~~~~g-vi~-Gvg~ 73 (286)
T 2r91_A 25 VKNITSKGVDVVFVAGTTGLG-------------------PALSLQE----------KMELTDAATSAARR-VIV-QVAS 73 (286)
T ss_dssp HHHHHHTTCCEEEETSTTTTG-------------------GGSCHHH----------HHHHHHHHHHHCSS-EEE-ECCC
T ss_pred HHHHHHCCCCEEEECccccCh-------------------hhCCHHH----------HHHHHHHHHHHhCC-EEE-eeCC
Confidence 455677899999988865422 2223221 12344444443322 653 4566
Q ss_pred CCCHHHHHH---HHHcCCCEEEEccccccC-CCHHHHHHHHHH
Q 021575 232 VATPADAAM---MMQLGCDGVFVGSGVFKS-GDPVKRAQAIVR 270 (310)
Q Consensus 232 I~t~~d~~~---~l~~GadgV~VGsai~~a-~dp~~~a~~l~~ 270 (310)
.++.+-+.. +.++|||++++....|.. +++....+-|..
T Consensus 74 ~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~ 116 (286)
T 2r91_A 74 LNADEAIALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRD 116 (286)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHH
Confidence 544443322 335799999999999976 666555543333
No 467
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=84.09 E-value=10 Score=33.85 Aligned_cols=93 Identities=17% Similarity=0.085 Sum_probs=57.3
Q ss_pred CCCCCCCHHHHHHHHhhcCcceeeccccC----c-HHHHHHHHHcCCCEEE-e---CC-CCCc--hh--HHHHHHhcCCC
Q 021575 74 GVARMSDPQLIKEIKQSVTIPVMAKARIG----H-FVEAQILEAIGIDYVD-E---SE-VLTP--AD--EENHINKHNFR 139 (310)
Q Consensus 74 G~~~~~~~~~i~~i~~~~~iPv~vk~~~~----~-~~~a~~~~~aGad~Vi-~---~~-~~~~--~~--~~~~i~~~~~~ 139 (310)
|+..+++.+.++++. .++.||++|-... . ..-++.+.+.|.+-|+ . +. ..+. .+ .+..+++...+
T Consensus 117 gA~~~~n~~LLr~va-~~gkPVilK~G~~~t~~ei~~ave~i~~~Gn~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~~~ 195 (285)
T 3sz8_A 117 PAFLARQTDLVVAIA-KAGKPVNVKKPQFMSPTQLKHVVSKCGEVGNDRVMLCERGSSFGYDNLVVDMLGFRQMAETTGG 195 (285)
T ss_dssp CGGGTTCHHHHHHHH-HTSSCEEEECCTTSCGGGTHHHHHHHHHTTCCCEEEEECCEECSSSCEECCTTHHHHHHHHTTS
T ss_pred CccccCCHHHHHHHH-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCcCccCHHHHHHHHHhCCC
Confidence 454578899999876 5899999986542 1 2335667778987663 1 11 1111 12 23334443336
Q ss_pred CcEEEe-cCC------------------HHHHHHHHHhCCC--EEEEcC
Q 021575 140 IPFVCG-CRN------------------LGEALRRIREGAA--MIRTKG 167 (310)
Q Consensus 140 i~~~v~-~~t------------------~~ea~~~~~~Gad--~V~v~g 167 (310)
++++.+ .|+ ..-++.+..+|+| +|-+|.
T Consensus 196 ~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~H~ 244 (285)
T 3sz8_A 196 CPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLEAHP 244 (285)
T ss_dssp CCEEEETTTTCC---------------HHHHHHHHHHHCCSEEEEEEES
T ss_pred CCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEecc
Confidence 888885 566 3345667789999 666674
No 468
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=84.08 E-value=6.3 Score=34.54 Aligned_cols=34 Identities=21% Similarity=0.408 Sum_probs=28.2
Q ss_pred CCCEEEeCCCCCCCHHHHHHHH-HcCCCEEEEcccccc
Q 021575 221 RLPVVHFAAGGVATPADAAMMM-QLGCDGVFVGSGVFK 257 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~~d~~~~l-~~GadgV~VGsai~~ 257 (310)
+++|+ -+|+| +++++.+++ ..+.||++||++-++
T Consensus 203 ~vrIl--YGGSV-~~~N~~~l~~~~diDG~LVGgASL~ 237 (249)
T 3th6_A 203 KVRIQ--YGGSV-NAGNCKELGRKPDIDGFLVGGASLK 237 (249)
T ss_dssp HCCEE--ECSCC-CTTTHHHHHTSTTCCEEEECGGGGS
T ss_pred cccEE--EcCcc-CHhHHHHHhcCCCCCEEEeehHhhh
Confidence 47898 46888 588888877 679999999999996
No 469
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=84.04 E-value=5.5 Score=37.21 Aligned_cols=105 Identities=10% Similarity=0.161 Sum_probs=68.5
Q ss_pred HHHHHHHHcCCCEEE-eCC----------CCCchhHHHHHHh--cCCCCcEEEecCCHHHHHHHHHhCCCEEEEcCCCCC
Q 021575 105 VEAQILEAIGIDYVD-ESE----------VLTPADEENHINK--HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGT 171 (310)
Q Consensus 105 ~~a~~~~~aGad~Vi-~~~----------~~~~~~~~~~i~~--~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~ 171 (310)
+.++.+.++|+|.|. .+- .+....+ +.+.+ ...|++++.++++.+.+..+.+. +|++.+..+.
T Consensus 160 ~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl-~~L~~~~~~~Gl~~~te~~d~~~~~~l~~~-vd~lkIgs~~-- 235 (385)
T 3nvt_A 160 AVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGL-KILKRVSDEYGLGVISEIVTPADIEVALDY-VDVIQIGARN-- 235 (385)
T ss_dssp HHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHH-HHHHHHHHHHTCEEEEECCSGGGHHHHTTT-CSEEEECGGG--
T ss_pred HHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHH-HHHHHHHHHcCCEEEEecCCHHHHHHHHhh-CCEEEECccc--
Confidence 456778889999995 221 1222222 33333 24689999999999888888777 8888875421
Q ss_pred cchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCCC-CCHHHHHHHHH----cCC
Q 021575 172 GNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGV-ATPADAAMMMQ----LGC 246 (310)
Q Consensus 172 ~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GGI-~t~~d~~~~l~----~Ga 246 (310)
...+++++.+.+ .+.||++ +-|. .|++++..+.+ .|.
T Consensus 236 -----------------------------------~~n~~LL~~~a~-~gkPVil--k~G~~~t~~e~~~Ave~i~~~Gn 277 (385)
T 3nvt_A 236 -----------------------------------MQNFELLKAAGR-VDKPILL--KRGLSATIEEFIGAAEYIMSQGN 277 (385)
T ss_dssp -----------------------------------TTCHHHHHHHHT-SSSCEEE--ECCTTCCHHHHHHHHHHHHTTTC
T ss_pred -----------------------------------ccCHHHHHHHHc-cCCcEEE--ecCCCCCHHHHHHHHHHHHHcCC
Confidence 123567777766 5789983 5666 88888776653 476
Q ss_pred CEEEE
Q 021575 247 DGVFV 251 (310)
Q Consensus 247 dgV~V 251 (310)
.-+++
T Consensus 278 ~~i~L 282 (385)
T 3nvt_A 278 GKIIL 282 (385)
T ss_dssp CCEEE
T ss_pred CeEEE
Confidence 54444
No 470
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=83.93 E-value=3.5 Score=39.17 Aligned_cols=36 Identities=22% Similarity=0.134 Sum_probs=23.4
Q ss_pred cchhhhhhCcccccCCCHHHHHHHHHcCCcEEEeccC
Q 021575 28 VGLAQMLRGGVIMDVVTPEQARVAEEAGACAVMALER 64 (310)
Q Consensus 28 ~~~~~~~~~g~i~~~~~~~~A~~~~~~Ga~~i~~L~~ 64 (310)
.|++.....|+-....-.+.++.++++|+.++ .|+.
T Consensus 153 ~PviaD~dtGfG~~~~v~~~vk~~~~aGaaGi-~iED 188 (439)
T 3i4e_A 153 APIVADAEAGFGGVLNAFELMKAMIEAGASGV-HFED 188 (439)
T ss_dssp CCEEEECTTTTSSHHHHHHHHHHHHHHTCSEE-EEES
T ss_pred CCeEEECCCCCCccHHHHHHHHHHHHcCCEEE-EEeC
Confidence 55555555554333222367899999999997 7763
No 471
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=83.74 E-value=3.7 Score=37.05 Aligned_cols=85 Identities=14% Similarity=0.097 Sum_probs=49.3
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHH----H---hhcCcceeeccccCcHHHHHHHHH--cCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEI----K---QSVTIPVMAKARIGHFVEAQILEA--IGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i----~---~~~~iPv~vk~~~~~~~~a~~~~~--aGad 116 (310)
+.|+.+.+.||+.| +++. |.......+.++++ + +.+++|+++... ..+.++.+.+ +|++
T Consensus 41 ~~A~~~v~~GAdiI-DIg~---------g~~~v~~~eem~rvv~~i~~~~~~~~vpisIDT~--~~~V~eaaL~~~~Ga~ 108 (300)
T 3k13_A 41 SIARQQVEDGALVI-DVNM---------DDGLLDARTEMTTFLNLIMSEPEIARVPVMIDSS--KWEVIEAGLKCLQGKS 108 (300)
T ss_dssp HHHHHHHHTTCSEE-EEEC---------CCTTSCHHHHHHHHHHHHHTCHHHHTSCEEEECS--CHHHHHHHHHHCSSCC
T ss_pred HHHHHHHHCCCCEE-EECC---------CCCCCCHHHHHHHHHHHHHHhhhcCCCeEEEeCC--CHHHHHHHHHhcCCCC
Confidence 57888999999965 7751 11111112333332 2 446899998765 4477788888 7999
Q ss_pred EEE-eCCCCCch---hHHHHHHhcCCCCcE
Q 021575 117 YVD-ESEVLTPA---DEENHINKHNFRIPF 142 (310)
Q Consensus 117 ~Vi-~~~~~~~~---~~~~~i~~~~~~i~~ 142 (310)
.|- ++.....+ +..+.+++++..+.+
T Consensus 109 iINdIs~~~~d~~~~~~~~l~a~~ga~vV~ 138 (300)
T 3k13_A 109 IVNSISLKEGEEVFLEHARIIKQYGAATVV 138 (300)
T ss_dssp EEEEECSTTCHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEeCCcccCChhHHHHHHHHHHhCCeEEE
Confidence 883 33322122 455566555443333
No 472
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=83.67 E-value=8.4 Score=35.32 Aligned_cols=42 Identities=5% Similarity=0.167 Sum_probs=36.2
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEc
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVG 252 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VG 252 (310)
+++..+++++..++||+ +.+.+.+++++.++++.| +|.|++-
T Consensus 227 ~~~~~~~l~~~~~iPI~--~dE~~~~~~~~~~~i~~~~~d~v~ik 269 (371)
T 2ps2_A 227 TWRECISLRRKTDIPII--YDELATNEMSIVKILADDAAEGIDLK 269 (371)
T ss_dssp SHHHHHHHHTTCCSCEE--ESTTCCSHHHHHHHHHHTCCSEEEEE
T ss_pred CHHHHHHHHhhCCCCEE--eCCCcCCHHHHHHHHHhCCCCEEEec
Confidence 67788888888899998 689999999999999765 8999874
No 473
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=83.60 E-value=7.6 Score=34.91 Aligned_cols=87 Identities=15% Similarity=0.108 Sum_probs=49.5
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhc--CCCCEEEeCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQL--GRLPVVHFAA 229 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~--~~iPVi~iA~ 229 (310)
+....+.|++.+.+.|.++-. .+++.++- .++++.+.+. .++||++ ..
T Consensus 41 v~~li~~Gv~Gl~v~GtTGE~-------------------~~Ls~~Er----------~~v~~~~~~~~~gr~pvia-Gv 90 (307)
T 3s5o_A 41 LHKLGTFPFRGFVVQGSNGEF-------------------PFLTSSER----------LEVVSRVRQAMPKNRLLLA-GS 90 (307)
T ss_dssp HHHHTTSCCSEEEESSGGGTG-------------------GGSCHHHH----------HHHHHHHHHTSCTTSEEEE-EC
T ss_pred HHHHHHcCCCEEEECccccch-------------------hhCCHHHH----------HHHHHHHHHHcCCCCcEEE-ec
Confidence 444567799999988765421 22232211 2334444443 4689984 45
Q ss_pred CCCCCHHHHH---HHHHcCCCEEEEccccccC--CCHHHHHHHH
Q 021575 230 GGVATPADAA---MMMQLGCDGVFVGSGVFKS--GDPVKRAQAI 268 (310)
Q Consensus 230 GGI~t~~d~~---~~l~~GadgV~VGsai~~a--~dp~~~a~~l 268 (310)
|+.++.+.+. .+.++|||++++-...|-. .++....+-|
T Consensus 91 g~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f 134 (307)
T 3s5o_A 91 GCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHY 134 (307)
T ss_dssp CCSSHHHHHHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHH
Confidence 5554443332 3336899999999888753 3544444433
No 474
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=83.46 E-value=8.2 Score=35.65 Aligned_cols=41 Identities=12% Similarity=0.053 Sum_probs=34.3
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEE
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFV 251 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~V 251 (310)
+++..+++++.+++||+ +.+.+.++.++.++++.| +|.+.+
T Consensus 224 d~~~~~~l~~~~~iPIa--~dE~~~~~~~~~~~i~~~~~d~v~i 265 (382)
T 2gdq_A 224 QPQDYAMLRSRLSVPVA--GGENMKGPAQYVPLLSQRCLDIIQP 265 (382)
T ss_dssp CHHHHHHHHTTCSSCEE--ECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred cHHHHHHHHhhCCCCEE--ecCCcCCHHHHHHHHHcCCCCEEec
Confidence 46778888887889998 678999999999999876 788776
No 475
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=83.42 E-value=14 Score=34.24 Aligned_cols=46 Identities=11% Similarity=0.073 Sum_probs=37.2
Q ss_pred cHHHHHHHhh-cCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEccccc
Q 021575 209 PYDLVMQTKQ-LGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVGSGVF 256 (310)
Q Consensus 209 ~~~~i~~i~~-~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VGsai~ 256 (310)
+++..+++++ ..++||+ +.+.+.+++++.++++.| +|.|++--.-.
T Consensus 234 d~~~~~~l~~~~~~iPI~--~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 281 (401)
T 2hzg_A 234 ALAAHAALAGRGARVRIA--GGEAAHNFHMAQHLMDYGRIGFIQIDCGRI 281 (401)
T ss_dssp CHHHHHHHHTTCCSSEEE--ECTTCSSHHHHHHHHHHSCCSEEEECHHHH
T ss_pred CHHHHHHHHhhCCCCCEE--ecCCcCCHHHHHHHHHCCCCCEEEeCcchh
Confidence 4677888888 7889998 789999999999999765 89998854333
No 476
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=83.42 E-value=19 Score=31.84 Aligned_cols=108 Identities=16% Similarity=0.139 Sum_probs=64.4
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeecccc-CcHHHHHHHHHcCCCEEEe-CC-
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARI-GHFVEAQILEAIGIDYVDE-SE- 122 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~-~~~~~a~~~~~aGad~Vi~-~~- 122 (310)
..++.+.++|+++++..+ .|.+ . .+.+.+..+..++.++.-... ...+.++.+.+.+.++|.. +.
T Consensus 116 ~f~~~~~~aGvdGvIipD-lp~e--e---------~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY~vs~~ 183 (271)
T 3nav_A 116 DFYQRCQKAGVDSVLIAD-VPTN--E---------SQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYLLSRA 183 (271)
T ss_dssp HHHHHHHHHTCCEEEETT-SCGG--G---------CHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEEECCCC
T ss_pred HHHHHHHHCCCCEEEECC-CCHH--H---------HHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEEEEecc
Confidence 468899999999974443 1111 1 234444444556554322222 2356777777777777731 11
Q ss_pred ----C--CCch---hHHHHHHhcCCCCcEEE--ecCCHHHHHHHHHhCCCEEEEc
Q 021575 123 ----V--LTPA---DEENHINKHNFRIPFVC--GCRNLGEALRRIREGAAMIRTK 166 (310)
Q Consensus 123 ----~--~~~~---~~~~~i~~~~~~i~~~v--~~~t~~ea~~~~~~Gad~V~v~ 166 (310)
. ..+. ++.+.+++. .++++.+ +++|.+++..+...|+|.+.+.
T Consensus 184 GvTG~~~~~~~~~~~~v~~vr~~-~~~Pv~vGfGIst~e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 184 GVTGAETKANMPVHALLERLQQF-DAPPALLGFGISEPAQVKQAIEAGAAGAISG 237 (271)
T ss_dssp --------CCHHHHHHHHHHHHT-TCCCEEECSSCCSHHHHHHHHHTTCSEEEES
T ss_pred CCCCcccCCchhHHHHHHHHHHh-cCCCEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 1 1122 444555443 3566665 4899999998999999999885
No 477
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=83.39 E-value=4.8 Score=36.03 Aligned_cols=82 Identities=18% Similarity=0.132 Sum_probs=49.8
Q ss_pred ecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCE
Q 021575 145 GCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPV 224 (310)
Q Consensus 145 ~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPV 224 (310)
++...+-++.+.+.|++.|.+..+. +... +.... .......+.++.+++..++|+
T Consensus 27 ~~~~~~~a~~~~~~Ga~~I~~l~p~--~~~~-------------~~~~G----------~~~~~~~~~i~~I~~~~~iPv 81 (305)
T 2nv1_A 27 DVINAEQAKIAEEAGAVAVMALERV--PADI-------------RAAGG----------VARMADPTIVEEVMNAVSIPV 81 (305)
T ss_dssp EESSHHHHHHHHHTTCSEEEECCC----------------------CCC----------CCCCCCHHHHHHHHHHCSSCE
T ss_pred cCCHHHHHHHHHHcCCCEEEEcCCC--cchh-------------hhccC----------cccCCCHHHHHHHHHhCCCCE
Confidence 6667777888889999999433211 0000 00000 001224567778877788999
Q ss_pred EEeCCCCCCC--HHHHHHHHHcCCCEEEEccccc
Q 021575 225 VHFAAGGVAT--PADAAMMMQLGCDGVFVGSGVF 256 (310)
Q Consensus 225 i~iA~GGI~t--~~d~~~~l~~GadgV~VGsai~ 256 (310)
+ ++++. .+++..+.++|||+|. ++..+
T Consensus 82 ~----~k~r~g~~~~~~~~~a~GAd~V~-~~~~l 110 (305)
T 2nv1_A 82 M----AKARIGHIVEARVLEAMGVDYID-ESEVL 110 (305)
T ss_dssp E----EEECTTCHHHHHHHHHHTCSEEE-ECTTS
T ss_pred E----ecccccchHHHHHHHHCCCCEEE-EeccC
Confidence 7 34444 6777788899999997 54433
No 478
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=83.39 E-value=5.1 Score=34.55 Aligned_cols=84 Identities=18% Similarity=0.177 Sum_probs=55.5
Q ss_pred HHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEE-----eC----CCCC-chhHHHHHHhcCCC-CcEEEecCCH
Q 021575 81 PQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVD-----ES----EVLT-PADEENHINKHNFR-IPFVCGCRNL 149 (310)
Q Consensus 81 ~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi-----~~----~~~~-~~~~~~~i~~~~~~-i~~~v~~~t~ 149 (310)
.+.++.+.+. ++++-+-.-+. ..++..+.++||++|. .. +++. ..++.+.++.+++. ....++.++.
T Consensus 94 l~A~~~L~~~-GI~vn~TlifS-~~QA~~Aa~AGa~yISPfvgRi~d~g~dG~~~v~~i~~~~~~~~~~T~IlaAS~Rn~ 171 (223)
T 3s1x_A 94 LRAIKTLSSE-HINTNCTLVFN-PIQALLAAKAGVTYVSPFVGRLDDIGEDGMQIIDMIRTIFNNYIIKTQILVASIRNP 171 (223)
T ss_dssp HHHHHHHHHT-TCCEEEEEECS-HHHHHHHHHTTCSEEEEBSHHHHHTTSCTHHHHHHHHHHHHHTTCCSEEEEBSCCSH
T ss_pred HHHHHHHHHC-CCcEEEEEeCC-HHHHHHHHHcCCeEEEeecchHhhcCCCHHHHHHHHHHHHHHcCCCCEEEEEeCCCH
Confidence 3445555433 66665544333 3567778889999993 11 1111 34556666666777 4556679999
Q ss_pred HHHHHHHHhCCCEEEEc
Q 021575 150 GEALRRIREGAAMIRTK 166 (310)
Q Consensus 150 ~ea~~~~~~Gad~V~v~ 166 (310)
.++..+..+|+|.+++.
T Consensus 172 ~~v~~aa~~G~d~~Tip 188 (223)
T 3s1x_A 172 IHVLRSAVIGADVVTVP 188 (223)
T ss_dssp HHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHcCCCEEEeC
Confidence 99999999999999875
No 479
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=83.32 E-value=24 Score=31.30 Aligned_cols=67 Identities=9% Similarity=0.070 Sum_probs=39.8
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCH---HHHHHHHhhc--CcceeeccccCc----HHHHHHHHHcCCC
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDP---QLIKEIKQSV--TIPVMAKARIGH----FVEAQILEAIGID 116 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~---~~i~~i~~~~--~iPv~vk~~~~~----~~~a~~~~~aGad 116 (310)
..+..+.+.|+++++.+. . .|-...+... +.++.+.+.+ .+||++...-.. .+.++.+.++|+|
T Consensus 28 ~lv~~li~~Gv~gl~~~G-t------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gad 100 (294)
T 3b4u_A 28 AHARRCLSNGCDSVTLFG-T------TGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGAR 100 (294)
T ss_dssp HHHHHHHHTTCSEEEESS-T------TTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEECc-c------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCC
Confidence 567778899999985441 1 1101112211 2333344444 589998765432 3567788889999
Q ss_pred EEE
Q 021575 117 YVD 119 (310)
Q Consensus 117 ~Vi 119 (310)
+++
T Consensus 101 avl 103 (294)
T 3b4u_A 101 NIL 103 (294)
T ss_dssp EEE
T ss_pred EEE
Confidence 996
No 480
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=83.32 E-value=1.7 Score=37.93 Aligned_cols=75 Identities=13% Similarity=0.097 Sum_probs=50.8
Q ss_pred ccCCCHHHHHHHHHcCCcEEEeccCC-cccccccCCCCCCCCHHHHHHHHhh--cCcceeeccccCcHHHHHHHHHcCCC
Q 021575 40 MDVVTPEQARVAEEAGACAVMALERV-PADIRSQGGVARMSDPQLIKEIKQS--VTIPVMAKARIGHFVEAQILEAIGID 116 (310)
Q Consensus 40 ~~~~~~~~A~~~~~~Ga~~i~~L~~~-~~~~~~~~G~~~~~~~~~i~~i~~~--~~iPv~vk~~~~~~~~a~~~~~aGad 116 (310)
.++.+++.+..+.+.|+|-+ .++|. ++..+.. . ....++.++++++. .++|+++-..++ .+.+..+.++|+|
T Consensus 140 ~S~ht~~Ea~~A~~~GaDyI-~vgpvf~T~tK~~--~-~~~gl~~l~~~~~~~~~~iPvvAiGGI~-~~ni~~~~~aGa~ 214 (243)
T 3o63_A 140 RSTHDPDQVAAAAAGDADYF-CVGPCWPTPTKPG--R-AAPGLGLVRVAAELGGDDKPWFAIGGIN-AQRLPAVLDAGAR 214 (243)
T ss_dssp EEECSHHHHHHHHHSSCSEE-EECCSSCCCC--------CCCHHHHHHHHTC---CCCEEEESSCC-TTTHHHHHHTTCC
T ss_pred EeCCCHHHHHHHhhCCCCEE-EEcCccCCCCCCC--c-chhhHHHHHHHHHhccCCCCEEEecCCC-HHHHHHHHHcCCC
Confidence 46678888888889999976 66542 2221111 0 12236788888876 589999877664 3668889999999
Q ss_pred EEE
Q 021575 117 YVD 119 (310)
Q Consensus 117 ~Vi 119 (310)
+|.
T Consensus 215 gva 217 (243)
T 3o63_A 215 RIV 217 (243)
T ss_dssp CEE
T ss_pred EEE
Confidence 995
No 481
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=83.31 E-value=9.8 Score=34.74 Aligned_cols=110 Identities=15% Similarity=0.135 Sum_probs=57.2
Q ss_pred HcCCcEEEecc-CCcccccccCCCCCCCCHHH----HHHHHhhcCcceeeccccCcH-----HHHHHHHH-cCCCEEEeC
Q 021575 53 EAGACAVMALE-RVPADIRSQGGVARMSDPQL----IKEIKQSVTIPVMAKARIGHF-----VEAQILEA-IGIDYVDES 121 (310)
Q Consensus 53 ~~Ga~~i~~L~-~~~~~~~~~~G~~~~~~~~~----i~~i~~~~~iPv~vk~~~~~~-----~~a~~~~~-aGad~Vi~~ 121 (310)
..+++.+ +|| .+|... ++......++. ++.+++.+..|+.+|...... ..++.+.+ .+++.+...
T Consensus 153 ~~~ad~i-elNiScPn~~---g~~~l~~~~~~~~~i~~~v~~~~~~pv~vK~~p~~~~~~~~~~~~~~~~~~~~~~i~~i 228 (354)
T 3tjx_A 153 TEKGVIL-ELNLSCPNVP---GKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAAFDAAAEILNEFPKVQFITCI 228 (354)
T ss_dssp HHHCCEE-EEECC------------CTTSHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred hcCCCEE-EeeeCCCCCc---chhhhccCHHHHHHHHHHHHHHhhcccccccCCCCCchhHHHHHHHHHhhcccchhhee
Confidence 3478876 888 454322 22223334444 445567789999999876531 22233333 344443211
Q ss_pred CC------------------------CC---ch----hHHHHHHhcCCCCcEE-E-ecCCHHHHHHHHHhCCCEEEEc
Q 021575 122 EV------------------------LT---PA----DEENHINKHNFRIPFV-C-GCRNLGEALRRIREGAAMIRTK 166 (310)
Q Consensus 122 ~~------------------------~~---~~----~~~~~i~~~~~~i~~~-v-~~~t~~ea~~~~~~Gad~V~v~ 166 (310)
.. ++ .. +.+..+.+...+++++ + ++.|.++|.+.+.+||+.|-+.
T Consensus 229 ~t~~~~~~id~~~~~~~~~~~~~~GGlSG~~~~~~a~~~v~~~~~~~~~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~ 306 (354)
T 3tjx_A 229 NSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVG 306 (354)
T ss_dssp CCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTEEEEEEC
T ss_pred cccccccccccccccccccCcccccccCchhhHHHHHHHHHHHHHhcCCCcEEEeCCcCCHHHHHHHHHcCCCEEEEC
Confidence 10 11 00 1222333323455443 3 4999999999999999999874
No 482
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=83.26 E-value=8.7 Score=35.77 Aligned_cols=42 Identities=14% Similarity=-0.039 Sum_probs=34.8
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEc
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVG 252 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VG 252 (310)
+++.++++++..++||. +...+.++.++.++++.|+|.+.+-
T Consensus 230 d~~~~~~l~~~~~iPIa--~dE~~~~~~~~~~~i~~~~d~v~~k 271 (393)
T 4dwd_A 230 HVGAMGEVAQRLDITVS--AGEQTYTLQALKDLILSGVRMVQPD 271 (393)
T ss_dssp CHHHHHHHHHHCSSEEE--BCTTCCSHHHHHHHHHHTCCEECCC
T ss_pred cHHHHHHHHhhCCCCEE--ecCCcCCHHHHHHHHHcCCCEEEeC
Confidence 36677788887889998 7888999999999998778888764
No 483
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=83.20 E-value=5.7 Score=34.97 Aligned_cols=62 Identities=18% Similarity=0.151 Sum_probs=39.8
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHH----HHhhcCcceeeccccCcHHHHHHHHHc--CCCEEE
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKE----IKQSVTIPVMAKARIGHFVEAQILEAI--GIDYVD 119 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~----i~~~~~iPv~vk~~~~~~~~a~~~~~a--Gad~Vi 119 (310)
+.|+.+.+.||+.| +++. |+......+.+++ +++.+++|+++... ..+.++.+.++ |++.|-
T Consensus 29 ~~a~~~v~~GAdiI-DIg~---------g~~~v~~~ee~~rvv~~i~~~~~~pisIDT~--~~~v~~aAl~a~~Ga~iIN 96 (262)
T 1f6y_A 29 EWARRQEEGGARAL-DLNV---------GPAVQDKVSAMEWLVEVTQEVSNLTLCLDST--NIKAIEAGLKKCKNRAMIN 96 (262)
T ss_dssp HHHHHHHHHTCSEE-EEBC---------C----CHHHHHHHHHHHHHTTCCSEEEEECS--CHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHCCCcEE-EECC---------CCCCCChHHHHHHHHHHHHHhCCCeEEEeCC--CHHHHHHHHhhCCCCCEEE
Confidence 56888999999965 7751 2111122344444 35556899988665 34677888887 999984
No 484
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=83.17 E-value=15 Score=32.65 Aligned_cols=88 Identities=13% Similarity=0.189 Sum_probs=51.1
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGG 231 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GG 231 (310)
+....+.|++.+.+.|.++-. .+++.++ -.++++.+.+..+- |++ ..|+
T Consensus 26 v~~li~~Gv~gl~~~GttGE~-------------------~~Ls~eE----------r~~v~~~~~~~~~g-via-Gvg~ 74 (293)
T 1w3i_A 26 AENLIRKGIDKLFVNGTTGLG-------------------PSLSPEE----------KLENLKAVYDVTNK-IIF-QVGG 74 (293)
T ss_dssp HHHHHHTTCCEEEESSTTTTG-------------------GGSCHHH----------HHHHHHHHHTTCSC-EEE-ECCC
T ss_pred HHHHHHcCCCEEEECccccCh-------------------hhCCHHH----------HHHHHHHHHHHcCC-EEE-ecCC
Confidence 455677899999988865422 2222221 13345555554332 653 4566
Q ss_pred CCCHHHHHHHH---HcCCCEEEEccccccC-CCHHHHHHHHHH
Q 021575 232 VATPADAAMMM---QLGCDGVFVGSGVFKS-GDPVKRAQAIVR 270 (310)
Q Consensus 232 I~t~~d~~~~l---~~GadgV~VGsai~~a-~dp~~~a~~l~~ 270 (310)
.++.+.+..+. ++|||++++....|.. +++....+-|..
T Consensus 75 ~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~ 117 (293)
T 1w3i_A 75 LNLDDAIRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKT 117 (293)
T ss_dssp SCHHHHHHHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHH
Confidence 54444433333 4699999999999976 666555543333
No 485
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=83.04 E-value=6 Score=35.84 Aligned_cols=110 Identities=14% Similarity=0.055 Sum_probs=60.5
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccC---cHHHHHHHHHcCCC---EEE
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIG---HFVEAQILEAIGID---YVD 119 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~---~~~~a~~~~~aGad---~Vi 119 (310)
+.|+.+.+.||+.| +++...++.....-+ .....+.++.+++.+++|+++.+.-+ ..+.++.+.++|++ .|-
T Consensus 78 ~~A~~~v~~GAdiI-DIg~~StrP~~~~vs-~eee~~vV~~v~~~~~vplsI~DT~~~~~~~~V~eaal~aga~~k~iIN 155 (310)
T 2h9a_B 78 AWAKKCVEYGADIV-ALRLVSAHPDGQNRS-GAELAEVCKAVADAIDVPLMIIGCGVEEKDAEIFPVIGEALSGRNCLLS 155 (310)
T ss_dssp HHHHHHHHTTCSEE-EEECGGGCTTTTCCC-HHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEEE
T ss_pred HHHHHHHHcCCcEE-EEeCccCCCCCCCCC-HHHHHHHHHHHHHhCCceEEEECCCCCCCCHHHHHHHHHhCCCCCCEEE
Confidence 67889999999976 775221111110000 00012366667777899999833311 23567888999998 552
Q ss_pred -eCCCCCchhHHHHHHhcCCCCcEEEecC-CHHHHHH----HHHhCC
Q 021575 120 -ESEVLTPADEENHINKHNFRIPFVCGCR-NLGEALR----RIREGA 160 (310)
Q Consensus 120 -~~~~~~~~~~~~~i~~~~~~i~~~v~~~-t~~ea~~----~~~~Ga 160 (310)
.+. ....++...+.+++ .++++... +.+.+.+ +.++|.
T Consensus 156 dvs~-~~~~~~~~~aa~~g--~~vv~m~~~dv~~l~~~~~~a~~~Gi 199 (310)
T 2h9a_B 156 SATK-DNYKPIVATCMVHG--HSVVASAPLDINLSKQLNIMIMEMNL 199 (310)
T ss_dssp EECT-TTHHHHHHHHHHHT--CEEEEECSSCHHHHHHHHHHHHTTTC
T ss_pred ECCC-CccHHHHHHHHHhC--CCEEEEChhHHHHHHHHHHHHHHCCC
Confidence 332 34556666665544 34443332 4443333 345677
No 486
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=82.96 E-value=13 Score=27.98 Aligned_cols=61 Identities=15% Similarity=0.172 Sum_probs=43.1
Q ss_pred cHHHHHHHhh---cCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCC-CHHHHHHHHHHHHhccC
Q 021575 209 PYDLVMQTKQ---LGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSG-DPVKRAQAIVRAVTHYS 276 (310)
Q Consensus 209 ~~~~i~~i~~---~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~-dp~~~a~~l~~~i~~~~ 276 (310)
.+++++.+++ ..++|++++ .+-.+.+.+.++++.|+++++ .+.- ++....+.+...++.|.
T Consensus 66 g~~~~~~lr~~~~~~~~pii~~--s~~~~~~~~~~~~~~ga~~~l-----~Kp~~~~~~l~~~i~~~l~~~~ 130 (144)
T 3kht_A 66 GFEVMSAVRKPGANQHTPIVIL--TDNVSDDRAKQCMAAGASSVV-----DKSSNNVTDFYGRIYAIFSYWL 130 (144)
T ss_dssp HHHHHHHHHSSSTTTTCCEEEE--ETTCCHHHHHHHHHTTCSEEE-----ECCTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccccCCCEEEE--eCCCCHHHHHHHHHcCCCEEE-----ECCCCcHHHHHHHHHHHHHHHH
Confidence 3667777776 357899875 455578999999999999986 4444 56666666666665543
No 487
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=82.77 E-value=12 Score=27.37 Aligned_cols=56 Identities=9% Similarity=0.191 Sum_probs=38.2
Q ss_pred HHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHH
Q 021575 210 YDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAV 272 (310)
Q Consensus 210 ~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i 272 (310)
+++++.+++..++|++++ .+-.+.....++++.|+++.+ .+.-++......+.+.+
T Consensus 62 ~~~~~~lr~~~~~~ii~~--t~~~~~~~~~~~~~~ga~~~l-----~KP~~~~~l~~~i~~~l 117 (120)
T 3f6p_A 62 VEVCREVRKKYDMPIIML--TAKDSEIDKVIGLEIGADDYV-----TKPFSTRELLARVKANL 117 (120)
T ss_dssp HHHHHHHHTTCCSCEEEE--EESSCHHHHHHHHHTTCCEEE-----EESCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEE--ECCCChHHHHHHHhCCcceeE-----cCCCCHHHHHHHHHHHH
Confidence 566777776667899875 444578888899999999986 45445555554444433
No 488
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=82.75 E-value=4.6 Score=35.89 Aligned_cols=82 Identities=11% Similarity=0.116 Sum_probs=53.2
Q ss_pred cEEEecCCHHHHHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcC
Q 021575 141 PFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLG 220 (310)
Q Consensus 141 ~~~v~~~t~~ea~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~ 220 (310)
.+++++...+-+..+.+.|++.+-+.. + ...+ .++ +.. .......+.++++++..
T Consensus 23 ~~i~~~~~~~~a~~~~~~Ga~~i~~~e--~--v~~~-~~~----------~~G----------~~~~~~~~~i~~i~~~~ 77 (297)
T 2zbt_A 23 GVIMDVTTPEQAVIAEEAGAVAVMALE--R--VPAD-IRA----------QGG----------VARMSDPKIIKEIMAAV 77 (297)
T ss_dssp EEEEEESSHHHHHHHHHHTCSEEEECS--S--CHHH-HHH----------TTC----------CCCCCCHHHHHHHHTTC
T ss_pred CeeeeechHHHHHHHHHCCCcEEEecc--c--cchH-HHh----------hcC----------CccCCCHHHHHHHHHhc
Confidence 445566667778888899999986632 1 1000 000 000 00123467788888888
Q ss_pred CCCEEEeCCCCCCCHHHHHHHHHcCCCEE
Q 021575 221 RLPVVHFAAGGVATPADAAMMMQLGCDGV 249 (310)
Q Consensus 221 ~iPVi~iA~GGI~t~~d~~~~l~~GadgV 249 (310)
++|+++ ..++.+.+++..+.++|+|+|
T Consensus 78 ~~Pvi~--~~~~~~~~~~~~~~~aGad~v 104 (297)
T 2zbt_A 78 SIPVMA--KVRIGHFVEAMILEAIGVDFI 104 (297)
T ss_dssp SSCEEE--EEETTCHHHHHHHHHTTCSEE
T ss_pred CCCeEE--EeccCCHHHHHHHHHCCCCEE
Confidence 899983 466767899999999999999
No 489
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=82.68 E-value=34 Score=32.61 Aligned_cols=169 Identities=17% Similarity=0.098 Sum_probs=88.9
Q ss_pred HHHHHHHHcCCcEEEecc-CCcccc--cccCCCCCCCCHHHHHHHHhh-cCcceeeccc----cCc--------HHHHHH
Q 021575 46 EQARVAEEAGACAVMALE-RVPADI--RSQGGVARMSDPQLIKEIKQS-VTIPVMAKAR----IGH--------FVEAQI 109 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~-~~~~~~--~~~~G~~~~~~~~~i~~i~~~-~~iPv~vk~~----~~~--------~~~a~~ 109 (310)
+.+..+.+.|.+.| +.- |...+. +. ......+.++++++. -+.++.+-.+ .++ ..+++.
T Consensus 34 ~Ia~~L~~~Gv~~I-E~g~~atF~~~~r~----~~~d~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv~~~~v~~ 108 (464)
T 2nx9_A 34 PIAQQLDQIGYWSL-ECWGGATFDSCIRF----LGEDPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTFVER 108 (464)
T ss_dssp GGHHHHHTSCCSEE-EEEETTHHHHHHHT----TCCCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEE-EeCcCccccchhhc----cCCCHHHHHHHHHHhCCCCeEEEEeccccccCcccccchhhHHHHHH
Confidence 57889999999976 331 110000 00 012234677777764 3555554322 121 345788
Q ss_pred HHHcCCCEEEeCCCCC----chhHHHHHHhcCCCCcEEEe-----cCCHHH----HHHHHHhCCCEEEEcCCCCCcchHH
Q 021575 110 LEAIGIDYVDESEVLT----PADEENHINKHNFRIPFVCG-----CRNLGE----ALRRIREGAAMIRTKGEAGTGNIIE 176 (310)
Q Consensus 110 ~~~aGad~Vi~~~~~~----~~~~~~~i~~~~~~i~~~v~-----~~t~~e----a~~~~~~Gad~V~v~g~~~~~~~~~ 176 (310)
+.++|+|.|-+....+ ..+.++.+++.+..+...++ ..+.+. ++++.++|++.|.+-=..+...
T Consensus 109 a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~--- 185 (464)
T 2nx9_A 109 AVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMAGILT--- 185 (464)
T ss_dssp HHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETTSCCC---
T ss_pred HHhCCcCEEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCCcC---
Confidence 8999999985333222 22334444444433322221 124433 4445678998887642211111
Q ss_pred HHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEe--CCCCCCCHHHHHHHHHcCCCEEEEc
Q 021575 177 AVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHF--AAGGVATPADAAMMMQLGCDGVFVG 252 (310)
Q Consensus 177 ~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~i--A~GGI~t~~d~~~~l~~GadgV~VG 252 (310)
|.. ..++++.+++..++|+-+= -..|.. ..+...++++||+.|-..
T Consensus 186 -------------------P~~----------v~~lv~~l~~~~~~~i~~H~Hnd~GlA-vAN~laAv~AGa~~VD~t 233 (464)
T 2nx9_A 186 -------------------PYA----------AEELVSTLKKQVDVELHLHCHSTAGLA-DMTLLKAIEAGVDRVDTA 233 (464)
T ss_dssp -------------------HHH----------HHHHHHHHHHHCCSCEEEEECCTTSCH-HHHHHHHHHTTCSEEEEB
T ss_pred -------------------HHH----------HHHHHHHHHHhcCCeEEEEECCCCChH-HHHHHHHHHhCCCEEEEe
Confidence 111 1345666665556776420 356763 677778889999977643
No 490
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=82.66 E-value=8.2 Score=35.90 Aligned_cols=42 Identities=10% Similarity=-0.043 Sum_probs=34.6
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-CCEEEEc
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-CDGVFVG 252 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-adgV~VG 252 (310)
+++..+++++..++||+ +.+.+.++.++.++++.| +|.|.+-
T Consensus 259 d~~~~~~l~~~~~iPIa--~dE~~~~~~~~~~~i~~~~~d~v~ik 301 (398)
T 2pp0_A 259 DIEGHAQLAAALDTPIA--TGEMLTSFREHEQLILGNASDFVQPD 301 (398)
T ss_dssp CHHHHHHHHHHCSSCEE--ECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred hHHHHHHHHhhCCCCEE--ecCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 46777888887889998 678899999999999876 7887753
No 491
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=82.59 E-value=16 Score=32.38 Aligned_cols=88 Identities=15% Similarity=0.126 Sum_probs=50.7
Q ss_pred HHHHHHhCCCEEEEcCCCCCcchHHHHHHHHhhccceEeecccChhHHHHhhhccCCcHHHHHHHhhcCCCCEEEeCCCC
Q 021575 152 ALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGG 231 (310)
Q Consensus 152 a~~~~~~Gad~V~v~g~~~~~~~~~~~~~~r~~~~~~~~l~~~~~d~~~~~~~~~~~~~~~i~~i~~~~~iPVi~iA~GG 231 (310)
+....+.|++.+.+.|.++-. .+++.++ -.++++.+.+..+- |++ ..|+
T Consensus 26 v~~li~~Gv~gl~v~GtTGE~-------------------~~Ls~eE----------r~~v~~~~~~~~~g-Via-Gvg~ 74 (288)
T 2nuw_A 26 AKNLLEKGIDAIFVNGTTGLG-------------------PALSKDE----------KRQNLNALYDVTHK-LIF-QVGS 74 (288)
T ss_dssp HHHHHHTTCCEEEETSTTTTG-------------------GGSCHHH----------HHHHHHHHTTTCSC-EEE-ECCC
T ss_pred HHHHHHcCCCEEEECccccCh-------------------hhCCHHH----------HHHHHHHHHHHhCC-eEE-eeCC
Confidence 455677899999988865422 2223221 12344545544332 653 4555
Q ss_pred CCCHHHHHHH---HHcCCCEEEEccccccC-CCHHHHHHHHHH
Q 021575 232 VATPADAAMM---MQLGCDGVFVGSGVFKS-GDPVKRAQAIVR 270 (310)
Q Consensus 232 I~t~~d~~~~---l~~GadgV~VGsai~~a-~dp~~~a~~l~~ 270 (310)
.++.+.+..+ .++|||++++....|.. +++....+-|..
T Consensus 75 ~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~ 117 (288)
T 2nuw_A 75 LNLNDVMELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEE 117 (288)
T ss_dssp SCHHHHHHHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHH
Confidence 5444433322 24799999999999976 666555543433
No 492
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=82.35 E-value=15 Score=33.95 Aligned_cols=43 Identities=16% Similarity=0.210 Sum_probs=36.1
Q ss_pred cHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcC-----CCEEEEcc
Q 021575 209 PYDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLG-----CDGVFVGS 253 (310)
Q Consensus 209 ~~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~G-----adgV~VGs 253 (310)
+++.++++++.+++||+ +.+.+.++.++.++++.| +|.|.+--
T Consensus 249 d~~~~~~l~~~~~iPIa--~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~ 296 (392)
T 1tzz_A 249 DYALQAALAEFYPGPMA--TGENLFSHQDARNLLRYGGMRPDRDWLQFDC 296 (392)
T ss_dssp CHHHHHHHTTTCCSCEE--ECTTCCSHHHHHHHHHHSCCCTTTCEECCCT
T ss_pred hHHHHHHHHhhCCCCEE--ECCCCCCHHHHHHHHHcCCCccCCcEEEECc
Confidence 46778888888899998 678999999999999877 88888643
No 493
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=81.86 E-value=13 Score=27.26 Aligned_cols=55 Identities=16% Similarity=0.326 Sum_probs=37.8
Q ss_pred HHHHHHHhhc---CCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHH
Q 021575 210 YDLVMQTKQL---GRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRA 271 (310)
Q Consensus 210 ~~~i~~i~~~---~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~ 271 (310)
+++++++++. .++|++++ .+-.+.+...++++.|+++.+ .+.-++......+.+.
T Consensus 62 ~~~~~~l~~~~~~~~~pii~~--s~~~~~~~~~~~~~~Ga~~~l-----~KP~~~~~L~~~i~~~ 119 (122)
T 3gl9_A 62 FTVLKKLQEKEEWKRIPVIVL--TAKGGEEDESLALSLGARKVM-----RKPFSPSQFIEEVKHL 119 (122)
T ss_dssp HHHHHHHHTSTTTTTSCEEEE--ESCCSHHHHHHHHHTTCSEEE-----ESSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhcccccCCCEEEE--ecCCchHHHHHHHhcChhhhc-----cCCCCHHHHHHHHHHH
Confidence 6677777653 46899865 455578999999999999985 5544565555444433
No 494
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=81.73 E-value=3.4 Score=38.15 Aligned_cols=86 Identities=15% Similarity=0.118 Sum_probs=57.1
Q ss_pred HHHHHHHHHcCCCEEE-eCCCCCchhHHHHHHhcCCCCcEEEec-CCHHHHHHHHHhCCCEEEEcCCCCC--cchHHHHH
Q 021575 104 FVEAQILEAIGIDYVD-ESEVLTPADEENHINKHNFRIPFVCGC-RNLGEALRRIREGAAMIRTKGEAGT--GNIIEAVR 179 (310)
Q Consensus 104 ~~~a~~~~~aGad~Vi-~~~~~~~~~~~~~i~~~~~~i~~~v~~-~t~~ea~~~~~~Gad~V~v~g~~~~--~~~~~~~~ 179 (310)
..+++.+.++|+|.|- .....+..+....+++. ..+|+.+|. .+...+..+++.|+|.+.+++.-.. ..+.+.++
T Consensus 49 v~Qi~~l~~aG~diVRvavp~~~~a~al~~I~~~-~~vPlvaDiHf~~~lal~a~e~G~dklRINPGNig~~~~~~~vv~ 127 (366)
T 3noy_A 49 LNQIKRLYEAGCEIVRVAVPHKEDVEALEEIVKK-SPMPVIADIHFAPSYAFLSMEKGVHGIRINPGNIGKEEIVREIVE 127 (366)
T ss_dssp HHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHH-CSSCEEEECCSCHHHHHHHHHTTCSEEEECHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeCCCChHHHHHHHHHHhc-CCCCEEEeCCCCHHHHHHHHHhCCCeEEECCcccCchhHHHHHHH
Confidence 4667888999999994 43333344445555443 579999997 6889999999999999999853111 11234555
Q ss_pred HHHhhccceEe
Q 021575 180 HVRSVMGDIRV 190 (310)
Q Consensus 180 ~~r~~~~~~~~ 190 (310)
..++.-.-+|+
T Consensus 128 ~ak~~~~piRI 138 (366)
T 3noy_A 128 EAKRRGVAVRI 138 (366)
T ss_dssp HHHHHTCEEEE
T ss_pred HHHHcCCCEEE
Confidence 55554444555
No 495
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=81.24 E-value=21 Score=31.85 Aligned_cols=81 Identities=15% Similarity=0.115 Sum_probs=48.6
Q ss_pred HHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEE-EeCCCCCchhHHHHHHhcCCCCcEEEec---CCHHHHHHH-
Q 021575 81 PQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYV-DESEVLTPADEENHINKHNFRIPFVCGC---RNLGEALRR- 155 (310)
Q Consensus 81 ~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~V-i~~~~~~~~~~~~~i~~~~~~i~~~v~~---~t~~ea~~~- 155 (310)
++.++++++.+++|+.--.. +.+.++.+.+. +|.+ +.+..+...++.+.+.+ .+.++++.- .|.+|...+
T Consensus 80 L~~L~~~~~e~Glp~~Tev~--d~~~v~~l~~~-vd~lqIgA~~~~n~~LLr~va~--~gkPVilK~G~~~t~~ei~~av 154 (285)
T 3sz8_A 80 LKIFAEVKARFGVPVITDVH--EAEQAAPVAEI-ADVLQVPAFLARQTDLVVAIAK--AGKPVNVKKPQFMSPTQLKHVV 154 (285)
T ss_dssp HHHHHHHHHHHCCCEEEECC--SGGGHHHHHTT-CSEEEECGGGTTCHHHHHHHHH--TSSCEEEECCTTSCGGGTHHHH
T ss_pred HHHHHHHHHhcCCeEEEEeC--CHHHHHHHHHh-CCEEEECccccCCHHHHHHHHc--cCCcEEEeCCCCCCHHHHHHHH
Confidence 45677777888999985443 23456666677 9988 45555566666666553 456666652 255554443
Q ss_pred ---HHhCCC-EEEEc
Q 021575 156 ---IREGAA-MIRTK 166 (310)
Q Consensus 156 ---~~~Gad-~V~v~ 166 (310)
.+.|.+ ++-++
T Consensus 155 e~i~~~Gn~~i~L~e 169 (285)
T 3sz8_A 155 SKCGEVGNDRVMLCE 169 (285)
T ss_dssp HHHHHTTCCCEEEEE
T ss_pred HHHHHcCCCcEEEEe
Confidence 344664 44444
No 496
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=81.11 E-value=24 Score=29.85 Aligned_cols=58 Identities=17% Similarity=0.273 Sum_probs=42.5
Q ss_pred HHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHhc
Q 021575 210 YDLVMQTKQLGRLPVVHFAAGGVATPADAAMMMQLGCDGVFVGSGVFKSGDPVKRAQAIVRAVTH 274 (310)
Q Consensus 210 ~~~i~~i~~~~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~VGsai~~a~dp~~~a~~l~~~i~~ 274 (310)
+++++++++..++||+++ .+-.+.+.+.+++++||++.+ .+.-++......+...+..
T Consensus 97 ~~l~~~lr~~~~~~iI~l--t~~~~~~~~~~a~~~Ga~~yl-----~Kp~~~~~L~~~i~~~l~~ 154 (249)
T 3q9s_A 97 GDVVQRLRKNSALPIIVL--TARDTVEEKVRLLGLGADDYL-----IKPFHPDELLARVKVQLRQ 154 (249)
T ss_dssp HHHHHHHHTTCCCCEEEE--ESCCSHHHHHHHHHHTCSEEE-----ESSCCHHHHHHHHHHHHCC
T ss_pred HHHHHHHHcCCCCCEEEE--ECCCCHHHHHHHHHCCCcEEE-----ECCCCHHHHHHHHHHHHhh
Confidence 567777777667999975 555688999999999999986 4555666666656555543
No 497
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=81.07 E-value=13 Score=30.03 Aligned_cols=37 Identities=30% Similarity=0.555 Sum_probs=24.6
Q ss_pred HHHHHhhc--CCCCEEEeCCCCCCCHHHHHHHHHcCCCEEEE
Q 021575 212 LVMQTKQL--GRLPVVHFAAGGVATPADAAMMMQLGCDGVFV 251 (310)
Q Consensus 212 ~i~~i~~~--~~iPVi~iA~GGI~t~~d~~~~l~~GadgV~V 251 (310)
+++.+++. .++||++ ||.-..++...+.+.|+|++..
T Consensus 89 ~i~~L~~~g~~~i~v~v---GG~~~~~~~~~l~~~G~d~v~~ 127 (161)
T 2yxb_A 89 LMAKLRELGADDIPVVL---GGTIPIPDLEPLRSLGIREIFL 127 (161)
T ss_dssp HHHHHHHTTCTTSCEEE---EECCCHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHhcCCCCCEEEE---eCCCchhcHHHHHHCCCcEEEC
Confidence 45555554 2588873 5655667777777899998763
No 498
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=80.99 E-value=28 Score=30.49 Aligned_cols=109 Identities=14% Similarity=0.140 Sum_probs=72.3
Q ss_pred HHHHHHHHcCCcEE-EeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEEE-eCC-
Q 021575 46 EQARVAEEAGACAV-MALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVD-ESE- 122 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i-~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~Vi-~~~- 122 (310)
++|..++++| ++| +.|. +|.|. -...++..+++.+.+|+=+-... ..+..+.+.+.--+.|. .++
T Consensus 29 ~aA~~ae~aG-dgITvHlR---eDrRH-------I~d~Dv~~L~~~~~~~lNlE~a~-t~emi~ial~~kP~~vtLVPEk 96 (260)
T 3o6c_A 29 EAAFIVARHG-DQITLHVR---EDRRH-------AQDFDLENIIKFCKSPVNLECAL-NDEILNLALKLKPHRVTLVPEK 96 (260)
T ss_dssp HHHHHHHHHS-SEEEEECC---TTCSS-------SCHHHHHHHHHHCSSCEEEEECS-CHHHHHHHHHHCCSEEEECCCS
T ss_pred HHHHHHHHhC-CeEEEeeC---CCccc-------CCHHHHHHHHHHcCCCEEeecCC-CHHHHHHHHHcCCCEEEECCCC
Confidence 5677788999 998 6773 11121 12578888888888777654443 34677889999999983 332
Q ss_pred ----------CCCc---hhHHHHHHhcCCCCcEEEecCCHHHHHHHHHhCCCEEEEcC
Q 021575 123 ----------VLTP---ADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKG 167 (310)
Q Consensus 123 ----------~~~~---~~~~~~i~~~~~~i~~~v~~~t~~ea~~~~~~Gad~V~v~g 167 (310)
++.. .+.++.++..+..+..+++ .+.+....+.+.|+++|-+|.
T Consensus 97 reE~TTegGldv~~~~L~~~i~~L~~~GIrVSLFID-pd~~qi~aA~~~GAd~IELhT 153 (260)
T 3o6c_A 97 REELTTEGGLCLNHAKLKQSIEKLQNANIEVSLFIN-PSLEDIEKSKILKAQFIELHT 153 (260)
T ss_dssp GGGBCTTSSBCTTCTTHHHHHHHHHHTTCEEEEEEC-SCHHHHHHHHHTTCSEEEECC
T ss_pred CCccCCCCChhhCHHHHHHHHHHHHHCCCEEEEEeC-CCHHHHHHHHHhCCCEEEEec
Confidence 1122 3344444444555667777 467778888899999999873
No 499
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=80.96 E-value=3.1 Score=41.53 Aligned_cols=85 Identities=24% Similarity=0.275 Sum_probs=54.3
Q ss_pred HHHHHHHHcCCcEEEecc------CCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcC-CCEE
Q 021575 46 EQARVAEEAGACAVMALE------RVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIG-IDYV 118 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~------~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aG-ad~V 118 (310)
+.++.++++|++.| .+- +.|..... .+ .....+.++++++.+++||+....+...+.++.+.+.| +|.|
T Consensus 232 ~~a~~l~~~g~d~i-~v~~~~~~~~~~~~~~~-~~--~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l~~g~aD~V 307 (671)
T 1ps9_A 232 ELAQAIEAAGATII-NTGIGWHEARIPTIATP-VP--RGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDADMV 307 (671)
T ss_dssp HHHHHHHHHTCSEE-EEEECBTTCSSCSSSTT-SC--TTTTHHHHHHHTTSCSSCEEECSSCCSHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHhcCCCEE-EcCCCcccccccccccc-CC--cchHHHHHHHHHHhcCceEEEeCCCCCHHHHHHHHHcCCCCEE
Confidence 56888999999987 331 11110000 00 11235788899999999999988776667888888887 9999
Q ss_pred E-eCCCCCchhHHHHHH
Q 021575 119 D-ESEVLTPADEENHIN 134 (310)
Q Consensus 119 i-~~~~~~~~~~~~~i~ 134 (310)
- +...+..+++...++
T Consensus 308 ~~gR~~l~~P~l~~k~~ 324 (671)
T 1ps9_A 308 SMARPFLADAELLSKAQ 324 (671)
T ss_dssp EESTHHHHCTTHHHHHH
T ss_pred EeCHHHHhCcHHHHHHH
Confidence 4 333333344544443
No 500
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=80.93 E-value=2.9 Score=38.65 Aligned_cols=60 Identities=25% Similarity=0.321 Sum_probs=44.1
Q ss_pred HHHHHHHHcCCcEEEeccCCcccccccCCCCCCCCHHHHHHHHhhcCcceeeccccCcHHHHHHHHHcCCCEE
Q 021575 46 EQARVAEEAGACAVMALERVPADIRSQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYV 118 (310)
Q Consensus 46 ~~A~~~~~~Ga~~i~~L~~~~~~~~~~~G~~~~~~~~~i~~i~~~~~iPv~vk~~~~~~~~a~~~~~aGad~V 118 (310)
+++..+.++|++.+ .+- .|. ....+.+.+|++.+++|+++..-+++ ..+..+.++|+|.+
T Consensus 50 ~Qi~~l~~aG~diV-Rva-vp~----------~~~a~al~~I~~~~~vPlvaDiHf~~-~lal~a~e~G~dkl 109 (366)
T 3noy_A 50 NQIKRLYEAGCEIV-RVA-VPH----------KEDVEALEEIVKKSPMPVIADIHFAP-SYAFLSMEKGVHGI 109 (366)
T ss_dssp HHHHHHHHTTCCEE-EEE-CCS----------HHHHHHHHHHHHHCSSCEEEECCSCH-HHHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEE-EeC-CCC----------hHHHHHHHHHHhcCCCCEEEeCCCCH-HHHHHHHHhCCCeE
Confidence 57889999999965 431 111 11156888889999999999865453 56777899999998
Done!