Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>021577
MDGRKNPAFVPEWNLEDVRTTFLKCVGWQTEETLDPINCPYHYYCDSTYPGNYPPAVDVL
VLVYTAVSYLATLLLMVVDMVSSRGPASSFSQSKRFLLPSGPFSLPIILLMLAKGHRINS
VFPLSCVGPAILQLVYISALTFDFGANENIKYAFFEASTVSGILHASLYLDSVILPYYTG
FDALVSSSFSGECVSCVCRKEVLVVGGKLVTYRGWSVTTSLVVGTLCLRIVRRLYEANKA
KITAIMSLLESLSFIFIIKDSLYLATNSPPEQYLLRAAAFGGVFVLICLHLLKKACNKVA
QWSCPRPREK

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  021577
        (310 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2062678 - symbol:AT2G41610 "AT2G41610" species...   816  2.5e-81   1


>TAIR|locus:2062678 [details] [associations]
            symbol:AT2G41610 "AT2G41610" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0010413 "glucuronoxylan metabolic process"
            evidence=RCA] [GO:0045492 "xylan biosynthetic process"
            evidence=RCA] EMBL:CP002685 UniGene:At.19154 UniGene:At.42807
            EMBL:AY649274 IPI:IPI00535826 RefSeq:NP_181692.2
            EnsemblPlants:AT2G41610.1 GeneID:818759 KEGG:ath:AT2G41610
            TAIR:At2g41610 HOGENOM:HOG000239916 InParanoid:Q6DR41 OMA:LCRMEPL
            PhylomeDB:Q6DR41 ProtClustDB:CLSN2681215 Genevestigator:Q6DR41
            Uniprot:Q6DR41
        Length = 310

 Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
 Identities = 155/298 (52%), Positives = 216/298 (72%)

Query:    12 EWNLE-DVRTTFLKCVGWQTEETLDPINCPYHYYCDSTYPGNYPPAVDVLVLVYTAVSYL 70
             EW ++ D + TF KC  WQ E+TLDPINCP+HY+CDS Y G+YP   DVLV  +  V+YL
Sbjct:     4 EWEMDSDRKKTFFKCTKWQFEDTLDPINCPFHYFCDSIYAGDYPQITDVLVFFFVTVTYL 63

Query:    71 ATLLLMVVDMVSSRGPASSFS----QSKRFLLPSGPFSLPIILLMLAKGHRINSVFPLSC 126
              TL+++V  ++S R   +       +++R+LLPSGP SLP+I+L+LAKG RIN++FP+S 
Sbjct:    64 TTLIVVVRKVISRRRRENDDDGDDDKARRYLLPSGPISLPLIILILAKGQRINTLFPISI 123

Query:   127 VGPAILQLVYISALTFDFGANENIKYAFFEASTVSGILHASLYLDSVILPYYTGFDALVS 186
              GPAILQLV +S L F+    +   + FFEAST+SGILHASLYLD+VILPYYTGFDALV+
Sbjct:   124 FGPAILQLVQLSVLLFENNIEKEASFVFFEASTISGILHASLYLDAVILPYYTGFDALVT 183

Query:   187 SSFSGECVSCVCRKEVLVVGGKLVTYRGWSVTTSLVVGTLCLRIVRRLY--EANKAKITA 244
             S+FSG C SC+CRKE L+VGGK+V+YRGWS TT LVVG L LRI+ +L   E    ++  
Sbjct:   184 STFSGVCKSCICRKEPLIVGGKIVSYRGWSSTTFLVVGVLFLRIICKLCKEEGINKRVLV 243

Query:   245 IMSLLESLSFIFIIKDSLYLATNSPPEQYLL-RAAAFGGVFVLICLHLLKKACNKVAQ 301
             + ++++ L+ + +I+D +YLA  SP E+ +L R   FG + +LIC++++ K C  V++
Sbjct:   244 VKNVVQGLTLLVLIRDCVYLAVMSPVEEPILFRVFVFGFLLLLICVYVITKVCCLVSR 301


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.139   0.428    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      310       310   0.00079  116 3  11 22  0.47    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  219 KB (2120 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.98u 0.11s 26.09t   Elapsed:  00:00:01
  Total cpu time:  25.98u 0.11s 26.09t   Elapsed:  00:00:01
  Start:  Fri May 10 02:04:46 2013   End:  Fri May 10 02:04:47 2013

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