Query 021577
Match_columns 310
No_of_seqs 12 out of 14
Neff 2.0
Searched_HMMs 13730
Date Mon Mar 25 06:10:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021577.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021577hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2qalc2 d.53.1.1 (C:106-206) R 26.0 9.4 0.00069 28.1 0.9 20 145-164 71-90 (101)
2 d2de6a1 b.33.1.2 (A:1-142) Ter 21.3 9.3 0.00067 28.1 -0.0 11 35-45 86-96 (142)
3 d1w6na_ b.29.1.3 (A:) Galectin 20.7 7.6 0.00056 28.8 -0.6 24 17-42 57-80 (134)
4 d1z01a1 b.33.1.2 (A:16-163) 2- 19.6 11 0.00077 27.9 -0.0 11 35-45 86-96 (148)
5 d1vm9a_ b.33.1.1 (A:) Toluene- 19.2 14 0.0011 25.7 0.6 16 28-45 54-69 (109)
6 d2hy5a1 c.114.1.1 (A:1-130) Su 19.0 36 0.0027 24.5 2.9 18 105-122 21-38 (130)
7 d2cuqa2 g.39.1.3 (A:8-42) Four 18.9 14 0.0011 23.6 0.5 23 187-214 5-27 (35)
8 d2b1xa1 b.33.1.2 (A:1-162) Nap 18.9 12 0.00086 28.7 0.1 11 35-45 104-114 (162)
9 d2bmoa1 b.33.1.2 (A:3-152) Nit 17.7 12 0.00089 28.4 -0.1 13 33-45 91-103 (150)
10 d1nwpa_ b.6.1.1 (A:) Azurin {P 17.4 17 0.0012 27.0 0.7 12 40-53 107-118 (128)
No 1
>d2qalc2 d.53.1.1 (C:106-206) Ribosomal protein S3 C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=26.02 E-value=9.4 Score=28.06 Aligned_cols=20 Identities=30% Similarity=0.436 Sum_probs=17.3
Q ss_pred cCCccceeEEEEecchhhhh
Q 021577 145 GANENIKYAFFEASTVSGIL 164 (310)
Q Consensus 145 ~ad~dirYa~~eASTvSGIL 164 (310)
..+.||.|++-+|.|..|++
T Consensus 71 t~~~~Idy~~~~a~t~~Gv~ 90 (101)
T d2qalc2 71 TLRADIDYNTSEAHTTYGVI 90 (101)
T ss_dssp CGGGCEEEEECCCCBTTBCC
T ss_pred ccceeEEEEEEEEEcCceeE
Confidence 34678999999999999986
No 2
>d2de6a1 b.33.1.2 (A:1-142) Terminal oxygenase component of carbazole CarAa {Janthinobacterium sp. j3 [TaxId: 213804]}
Probab=21.30 E-value=9.3 Score=28.06 Aligned_cols=11 Identities=36% Similarity=0.812 Sum_probs=8.6
Q ss_pred CCccCCcceec
Q 021577 35 DPINCPYHYYC 45 (310)
Q Consensus 35 D~InCPYHYyC 45 (310)
+.|.||||-..
T Consensus 86 ~~i~Cp~Hgw~ 96 (142)
T d2de6a1 86 STITCWYHAWT 96 (142)
T ss_dssp TEEECTTTCEE
T ss_pred CEEeccceeeE
Confidence 35999999754
No 3
>d1w6na_ b.29.1.3 (A:) Galectin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.68 E-value=7.6 Score=28.84 Aligned_cols=24 Identities=17% Similarity=0.270 Sum_probs=16.1
Q ss_pred hhhheeeeecceeeecccCCccCCcc
Q 021577 17 DVRTTFLKCVGWQTEETLDPINCPYH 42 (310)
Q Consensus 17 ~i~~tf~KC~rWQ~EeT~D~InCPYH 42 (310)
.|.+.-.+--.|+-||+.+ +.|++
T Consensus 57 ~iV~Ns~~~g~Wg~Eer~~--~~PF~ 80 (134)
T d1w6na_ 57 TIVCNSKDDGAWGTEQREA--VFPFQ 80 (134)
T ss_dssp EEEEEEEETTEECCCEECS--CCCCC
T ss_pred EEEEcCccCCCcccceEEC--CCccc
Confidence 3555555556799999975 46765
No 4
>d1z01a1 b.33.1.2 (A:16-163) 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase component OxoO {Pseudomonas putida [TaxId: 303]}
Probab=19.57 E-value=11 Score=27.90 Aligned_cols=11 Identities=36% Similarity=0.800 Sum_probs=8.5
Q ss_pred CCccCCcceec
Q 021577 35 DPINCPYHYYC 45 (310)
Q Consensus 35 D~InCPYHYyC 45 (310)
+.|.||||-..
T Consensus 86 ~~i~Cp~Hgw~ 96 (148)
T d1z01a1 86 STISCWYHGFT 96 (148)
T ss_dssp TEEECTTTCEE
T ss_pred CEEEecccCCE
Confidence 35999999653
No 5
>d1vm9a_ b.33.1.1 (A:) Toluene-4-monooxygenase system protein C, TmoC {Pseudomonas mendocina [TaxId: 300]}
Probab=19.17 E-value=14 Score=25.70 Aligned_cols=16 Identities=25% Similarity=0.374 Sum_probs=11.3
Q ss_pred eeeecccCCccCCcceec
Q 021577 28 WQTEETLDPINCPYHYYC 45 (310)
Q Consensus 28 WQ~EeT~D~InCPYHYyC 45 (310)
|..+. +.|.||||...
T Consensus 54 g~~~~--~~i~Cp~Hg~~ 69 (109)
T d1vm9a_ 54 GSYEG--GVITCRAHLWT 69 (109)
T ss_dssp SEEET--TEEECTTTCCE
T ss_pred EeccC--CEEEcccCCce
Confidence 34554 67999999754
No 6
>d2hy5a1 c.114.1.1 (A:1-130) Sulfurtransferase DsrE {Chromatium vinosum [TaxId: 1049]}
Probab=18.98 E-value=36 Score=24.49 Aligned_cols=18 Identities=39% Similarity=0.506 Sum_probs=15.0
Q ss_pred HHHHHHHHhcCCccceee
Q 021577 105 LPIILLMLAKGHRINSVF 122 (310)
Q Consensus 105 LPlilL~lAKG~riNtvF 122 (310)
+=+...++++|++||+||
T Consensus 21 l~fA~aal~~gh~V~~vF 38 (130)
T d2hy5a1 21 YQFAKAALEKGHEIFRVF 38 (130)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHCCCeEEEEE
Confidence 446677889999999998
No 7
>d2cuqa2 g.39.1.3 (A:8-42) Four and a half LIM domains 3, FHL3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.94 E-value=14 Score=23.58 Aligned_cols=23 Identities=43% Similarity=0.960 Sum_probs=18.1
Q ss_pred ccccccccceeeecceeEEccEEEEEcc
Q 021577 187 SSFSGECVSCVCRKEVLVVGGKLVTYRG 214 (310)
Q Consensus 187 StFSGEC~sCvCRkE~LVVGG~lV~YRG 214 (310)
.+|+-.|+.| |+++-.|| |+||+
T Consensus 5 ~kfa~~C~~C---kk~It~GG--vtY~d 27 (35)
T d2cuqa2 5 NKFAPRCARC---SKTLTQGG--VTYRD 27 (35)
T ss_dssp CCSSCCCTTT---CCCCCSCC--EESSS
T ss_pred HHHHHHHhhc---CCccccCc--eeecC
Confidence 4788889888 68999999 55664
No 8
>d2b1xa1 b.33.1.2 (A:1-162) Naphthalene 1,2-dioxygenase alpha subunit, N-domain {Rhodococcus sp. ncimb12038 [TaxId: 92694]}
Probab=18.93 E-value=12 Score=28.67 Aligned_cols=11 Identities=36% Similarity=1.005 Sum_probs=8.3
Q ss_pred CCccCCcceec
Q 021577 35 DPINCPYHYYC 45 (310)
Q Consensus 35 D~InCPYHYyC 45 (310)
+-|.||||--.
T Consensus 104 ~~i~CpYHgW~ 114 (162)
T d2b1xa1 104 SHFRCPYHGWT 114 (162)
T ss_dssp SEEECTTTCCE
T ss_pred ccccCCCceeE
Confidence 45899999643
No 9
>d2bmoa1 b.33.1.2 (A:3-152) Nitrobenzene dioxygenase alpha subunit, NBDO-alpha {Comamonas sp. JS765 [TaxId: 58226]}
Probab=17.69 E-value=12 Score=28.44 Aligned_cols=13 Identities=23% Similarity=0.483 Sum_probs=9.7
Q ss_pred ccCCccCCcceec
Q 021577 33 TLDPINCPYHYYC 45 (310)
Q Consensus 33 T~D~InCPYHYyC 45 (310)
..+.|.||||--.
T Consensus 91 ~~~~i~CpYHgW~ 103 (150)
T d2bmoa1 91 NAKGFVCGYHGWG 103 (150)
T ss_dssp ECSEEECTTTCCE
T ss_pred cccceEeccccee
Confidence 4577899999653
No 10
>d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]}
Probab=17.44 E-value=17 Score=26.97 Aligned_cols=12 Identities=33% Similarity=1.353 Sum_probs=10.5
Q ss_pred CcceecCCCCCCCC
Q 021577 40 PYHYYCDSTYPGNY 53 (310)
Q Consensus 40 PYHYyCDs~YPgny 53 (310)
-|-|+| ||||-|
T Consensus 107 ~Y~f~C--t~PGH~ 118 (128)
T d1nwpa_ 107 KYGFFC--SFPGHI 118 (128)
T ss_dssp CEEEEC--CSTTCG
T ss_pred eEEEEE--CCCCcc
Confidence 399999 899987
Done!