BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021579
(310 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A2A6A1|GPTC8_MOUSE G patch domain-containing protein 8 OS=Mus musculus GN=Gpatch8 PE=2
SV=1
Length = 1505
Score = 134 bits (338), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 118/180 (65%), Gaps = 1/180 (0%)
Query: 54 DVEQASLDTKLTSSNIGFRLLQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGVGKQEED 112
++EQASLD + S NIG RLLQK GWK G+GLGK QG +PI ++ +G+G+ E +
Sbjct: 28 EIEQASLDKPIESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMGRMEME 87
Query: 113 DFFTAEENIQRRKLDIEVEDTEENAKKREVLAEREQKIQTEVKEIRKVFYCDLCNKQYKL 172
+ + +RR L++E EDTEE +K + ++E+ I ++++R FYC+LC+KQY+
Sbjct: 88 LDYAEDATERRRVLEVEKEDTEELRQKYKDYVDKEKAIAKALEDLRANFYCELCDKQYQK 147
Query: 173 AVEFEAHLSSYDHNHRKRFKEMREMHGTSSRDDRQKREQQRQEREMAKFAQMADAHKQQQ 232
EF+ H++SYDH H++R K++++ + R ++++++QE+ + + ++A+ KQ +
Sbjct: 148 HQEFDNHINSYDHAHKQRLKDLKQREFARNVSSRSRKDEKKQEKALRRLHELAEQRKQAE 207
>sp|Q9UKJ3|GPTC8_HUMAN G patch domain-containing protein 8 OS=Homo sapiens GN=GPATCH8 PE=1
SV=2
Length = 1502
Score = 134 bits (337), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 118/180 (65%), Gaps = 1/180 (0%)
Query: 54 DVEQASLDTKLTSSNIGFRLLQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGVGKQEED 112
++EQASLD + S NIG RLLQK GWK G+GLGK QG +PI ++ +G+G+ E +
Sbjct: 28 EIEQASLDKPIESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMGRMEME 87
Query: 113 DFFTAEENIQRRKLDIEVEDTEENAKKREVLAEREQKIQTEVKEIRKVFYCDLCNKQYKL 172
+ + +RR L++E EDTEE +K + ++E+ I ++++R FYC+LC+KQY+
Sbjct: 88 LDYAEDATERRRVLEVEKEDTEELRQKYKDYVDKEKAIAKALEDLRANFYCELCDKQYQK 147
Query: 173 AVEFEAHLSSYDHNHRKRFKEMREMHGTSSRDDRQKREQQRQEREMAKFAQMADAHKQQQ 232
EF+ H++SYDH H++R K++++ + R ++++++QE+ + + ++A+ KQ +
Sbjct: 148 HQEFDNHINSYDHAHKQRLKDLKQREFARNVSSRSRKDEKKQEKALRRLHELAEQRKQAE 207
>sp|A2AKY4|Z804A_MOUSE Zinc finger protein 804A OS=Mus musculus GN=Znf804a PE=2 SV=1
Length = 1200
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 60/95 (63%)
Query: 136 NAKKREVLAEREQKIQTEVKEIRKVFYCDLCNKQYKLAVEFEAHLSSYDHNHRKRFKEMR 195
N K AE+E I +++++ FYC+LC+KQY EF+ H++SYDH H++R KE++
Sbjct: 32 NGNKTLDYAEKENTIAKALEDLKANFYCELCDKQYYKHQEFDNHINSYDHAHKQRLKELK 91
Query: 196 EMHGTSSRDDRQKREQQRQEREMAKFAQMADAHKQ 230
+ + + ++++++QE+ + + ++A+ K+
Sbjct: 92 QREFARNVASKSRKDERKQEKALQRLHKLAELRKE 126
>sp|Q7Z570|Z804A_HUMAN Zinc finger protein 804A OS=Homo sapiens GN=ZNF804A PE=1 SV=3
Length = 1209
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 60/95 (63%)
Query: 136 NAKKREVLAEREQKIQTEVKEIRKVFYCDLCNKQYKLAVEFEAHLSSYDHNHRKRFKEMR 195
N K AE+E I +++++ FYC+LC+KQY EF+ H++SYDH H++R KE++
Sbjct: 32 NGNKTLDYAEKENTIAKALEDLKANFYCELCDKQYYKHQEFDNHINSYDHAHKQRLKELK 91
Query: 196 EMHGTSSRDDRQKREQQRQEREMAKFAQMADAHKQ 230
+ + + ++++++QE+ + + ++A+ K+
Sbjct: 92 QREFARNVASKSRKDERKQEKALQRLHKLAELRKE 126
>sp|A4D1E1|Z804B_HUMAN Zinc finger protein 804B OS=Homo sapiens GN=ZNF804B PE=2 SV=2
Length = 1349
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 53/79 (67%)
Query: 154 VKEIRKVFYCDLCNKQYKLAVEFEAHLSSYDHNHRKRFKEMREMHGTSSRDDRQKREQQR 213
+++++ FYC+LC+KQY EF+ H++SYDH H++R KE+++ + + +++++
Sbjct: 48 LEDVKANFYCELCDKQYHKHQEFDNHINSYDHAHKQRLKELKQREFARNVASKSWKDEKK 107
Query: 214 QEREMAKFAQMADAHKQQQ 232
QE+ + + Q+A+ +Q +
Sbjct: 108 QEKALKRLHQLAELRQQSE 126
>sp|Q6DF57|CCD75_XENTR Coiled-coil domain-containing protein 75 OS=Xenopus tropicalis
GN=ccdc75 PE=2 SV=1
Length = 261
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 55/93 (59%), Gaps = 8/93 (8%)
Query: 52 LDDVEQASLDTKLTSS----NIGFRLLQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGV 106
L DVE+ DTKL + N GF LLQKMG+K G+ LGK GI+EPI I+ + G+
Sbjct: 52 LKDVEKEKRDTKLNEALGNENKGFALLQKMGYKKGQALGKKGDGIVEPIPLNIKTGRSGI 111
Query: 107 GKQEEDDFFTAEENIQ--RRKLDIEVEDTEENA 137
G EE AEEN++ RRK+ + D E+ A
Sbjct: 112 G-HEEMKKRKAEENLESYRRKIQMRKHDEEQAA 143
>sp|P98175|RBM10_HUMAN RNA-binding protein 10 OS=Homo sapiens GN=RBM10 PE=1 SV=3
Length = 930
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 54 DVEQASLDTKLTSSNIGFRLLQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGVGKQEED 112
D EQ + D L S NIG R+LQ MGWK G GLG+ +QGI+ PI++ R G+G +
Sbjct: 847 DFEQPTRD-GLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSS 905
Query: 113 DFFTAEEN 120
T+ E+
Sbjct: 906 YGVTSTES 913
>sp|Q99KG3|RBM10_MOUSE RNA-binding protein 10 OS=Mus musculus GN=Rbm10 PE=1 SV=1
Length = 930
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 54 DVEQASLDTKLTSSNIGFRLLQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGVGKQEED 112
D EQ + D L S NIG R+LQ MGWK G GLG+ +QGI+ PI++ R G+G +
Sbjct: 847 DFEQPTRD-GLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSS 905
Query: 113 DFFTAEEN 120
T+ E+
Sbjct: 906 YGVTSTES 913
>sp|P70501|RBM10_RAT RNA-binding protein 10 OS=Rattus norvegicus GN=Rbm10 PE=2 SV=1
Length = 852
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 54 DVEQASLDTKLTSSNIGFRLLQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGVGKQEED 112
D EQ + D L S NIG R+LQ MGWK G GLG+ +QGI+ PI++ R G+G +
Sbjct: 769 DFEQPTRD-GLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSS 827
Query: 113 DFFTAEEN 120
T+ E+
Sbjct: 828 YGVTSTES 835
>sp|Q6DGZ0|CCD75_DANRE Coiled-coil domain-containing protein 75 OS=Danio rerio GN=ccdc75
PE=2 SV=1
Length = 262
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 11/77 (14%)
Query: 57 QASLDTKLTSSNIGFRLLQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGVGKQEEDDFF 115
+A+L + + S N GF LLQKMG+K G+GLGK+ G +EP+ I+ + G+G +E
Sbjct: 61 EAALQSSIGSQNKGFALLQKMGYKAGQGLGKEGAGRVEPVPLNIKTDRGGIGMEE----- 115
Query: 116 TAEENIQRRKLDIEVED 132
+++RK D E+++
Sbjct: 116 -----VKKRKADEELQN 127
>sp|Q8CH09|SUGP2_MOUSE SURP and G-patch domain-containing protein 2 OS=Mus musculus GN=Sugp2
PE=2 SV=2
Length = 1067
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 5/57 (8%)
Query: 63 KLTSSNIGFRLLQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGVG----KQEEDDF 114
KLT N+GF++LQKMGWK G GLG +GI EP+ G G+G +Q+ED F
Sbjct: 993 KLTDKNVGFQMLQKMGWKEGHGLGSLGKGIREPVSVGALSEGEGLGADGPEQKEDTF 1049
>sp|Q8IX01|SUGP2_HUMAN SURP and G-patch domain-containing protein 2 OS=Homo sapiens GN=SUGP2
PE=1 SV=2
Length = 1082
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 10/69 (14%)
Query: 51 DLDDVEQASLDTKLTSSNIGFRLLQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGVG-- 107
DLD +Q KLT N+GF++LQKMGWK G GLG +GI EP+ G G+G
Sbjct: 1001 DLDFAQQ-----KLTDKNLGFQMLQKMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLGAD 1055
Query: 108 --KQEEDDF 114
+ +ED F
Sbjct: 1056 GQEHKEDTF 1064
>sp|Q7TQC7|GPTC2_MOUSE G patch domain-containing protein 2 OS=Mus musculus GN=Gpatch2 PE=2
SV=2
Length = 527
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 67 SNIGFRLLQKMGW-KGKGLGKDEQGIIEPIKSGIRDPKLGVG 107
SNIG R+LQ MGW G GLG+D +GI EP+++ R LG+G
Sbjct: 467 SNIGNRMLQSMGWTPGSGLGRDGRGIAEPVQAVQRPKGLGLG 508
>sp|A4IGK4|RBM5_XENTR RNA-binding protein 5 OS=Xenopus tropicalis GN=rbm5 PE=2 SV=1
Length = 838
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 64 LTSSNIGFRLLQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGVG 107
+ +SNIG ++LQ MGWK G GLG+ QGI PI++ +R G+G
Sbjct: 764 IDNSNIGNKMLQAMGWKEGSGLGRKSQGITAPIQAQVRMRGAGLG 808
>sp|A0JMV4|RBM5A_XENLA RNA-binding protein 5-A OS=Xenopus laevis GN=rbm5-a PE=2 SV=1
Length = 833
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 64 LTSSNIGFRLLQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGVG 107
+ +SNIG ++LQ MGWK G GLG+ QGI PI++ +R G+G
Sbjct: 759 IDNSNIGNKMLQAMGWKEGSGLGRKSQGITAPIQAQVRMRGAGLG 803
>sp|Q6DDU9|RBM5B_XENLA RNA-binding protein 5-B OS=Xenopus laevis GN=rbm5-b PE=2 SV=1
Length = 749
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 64 LTSSNIGFRLLQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGVG 107
+ +SNIG ++LQ MGWK G GLG+ QGI PI++ +R G+G
Sbjct: 675 IDNSNIGNKMLQAMGWKEGSGLGRKSQGITAPIQAQVRMRGAGLG 719
>sp|Q94C11|SUGP1_ARATH SURP and G-patch domain-containing protein 1-like protein
OS=Arabidopsis thaliana GN=At3g52120 PE=2 SV=1
Length = 443
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 8/69 (11%)
Query: 55 VEQASLDTKLTSSNIGFRLLQKMGWK-GKGLGKDEQGIIEPIKSG-IRDPKLGVGK---- 108
++A+ K+ + N+G +LL KMGWK G+G+G +G+ +PI +G ++ LGVG
Sbjct: 349 TKEAAEKAKIQADNVGHKLLSKMGWKEGEGIGSSRKGMADPIMAGDVKTNNLGVGASAPG 408
Query: 109 --QEEDDFF 115
+ EDD +
Sbjct: 409 EVKPEDDIY 417
>sp|Q9NW75|GPTC2_HUMAN G patch domain-containing protein 2 OS=Homo sapiens GN=GPATCH2 PE=1
SV=1
Length = 528
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 64 LTSSNIGFRLLQKMGW-KGKGLGKDEQGIIEPIKSGIRDPKLGVG 107
+ +NIG R+LQ MGW G GLG+D +GI EPI++ R LG+G
Sbjct: 465 ILENNIGNRMLQNMGWTPGSGLGRDGKGISEPIQAMQRPKGLGLG 509
>sp|A4L691|PINX1_RAT PIN2/TERF1-interacting telomerase inhibitor 1 OS=Rattus norvegicus
GN=Pinx1 PE=2 SV=1
Length = 331
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 67 SNIGFRLLQKMGW-KGKGLGKDEQGIIEPIKSGIRDPKLGVG--KQEEDDFFTAEENIQR 123
S G ++L+KMGW KGKGLG EQG E IK +++ LG+G ED++ +++ +
Sbjct: 27 SKFGQKMLEKMGWSKGKGLGAQEQGATEHIKVKVKNNHLGLGATNNNEDNWIAHQDDFNQ 86
Query: 124 RKLDI------EVEDTEENAKKREVLAEREQKI 150
+ E D+ +N +K+ E + KI
Sbjct: 87 LLAALNTCHGQETADSSDNKEKKSFSLEEKSKI 119
>sp|Q91YE7|RBM5_MOUSE RNA-binding protein 5 OS=Mus musculus GN=Rbm5 PE=1 SV=1
Length = 815
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 21 EKEQAYQDSVIEDLAEDFRLPIHQKPIENVDLD----DVEQASLDTKLTSSNIGFRLLQK 76
E+E Y+D E E + +P +P D + EQ + D + SNIG ++LQ
Sbjct: 696 EREMKYRDRAAER-REKYGIPEPPEPKRKKQFDAGTVNYEQPTKD-GIDHSNIGNKMLQA 753
Query: 77 MGWK-GKGLGKDEQGIIEPIKSGIRDPKLGVG 107
MGW+ G GLG+ QGI PI++ +R G+G
Sbjct: 754 MGWREGSGLGRKCQGITAPIEAQVRLKGAGLG 785
>sp|Q3UFS4|CCD75_MOUSE Coiled-coil domain-containing protein 75 OS=Mus musculus GN=Ccdc75
PE=2 SV=2
Length = 262
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 60 LDTKLTSSNIGFRLLQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGVGKQEEDDFFTAE 118
L L N GF LLQKMG+K G+ LGK GI+EPI ++ K G+G E AE
Sbjct: 63 LKNALGCENKGFALLQKMGYKSGQALGKSGDGIVEPIPLNVKTGKSGIG-HESSLKRKAE 121
Query: 119 ENIQ--RRKLDI 128
E ++ RRK+ +
Sbjct: 122 ERLENYRRKIHM 133
>sp|Q8N954|CCD75_HUMAN Coiled-coil domain-containing protein 75 OS=Homo sapiens GN=CCDC75
PE=1 SV=3
Length = 259
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 60 LDTKLTSSNIGFRLLQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGVG 107
L L N GF LLQKMG+K G+ LGK GI+EPI I+ K G+G
Sbjct: 63 LKNALGCENKGFALLQKMGYKSGQALGKSGGGIVEPIPLNIKTGKSGIG 111
>sp|B2GV05|RBM5_RAT RNA-binding protein 5 OS=Rattus norvegicus GN=Rbm5 PE=2 SV=1
Length = 815
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 21 EKEQAYQDSVIEDLAEDFRLPIHQKPIENVDLD----DVEQASLDTKLTSSNIGFRLLQK 76
E+E Y+D E E + +P +P D + EQ + D + SNIG ++LQ
Sbjct: 696 EREMKYRDRAAER-REKYGIPEPPEPKRKKQFDAGTVNYEQPTKD-GIDHSNIGNKMLQA 753
Query: 77 MGWK-GKGLGKDEQGIIEPIKSGIRDPKLGVG 107
MGW+ G GLG+ QGI PI++ +R G+G
Sbjct: 754 MGWREGSGLGRKCQGITAPIEAQVRLKGAGLG 785
>sp|Q1RMU5|RBM5_BOVIN RNA-binding protein 5 OS=Bos taurus GN=RBM5 PE=2 SV=1
Length = 815
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 21 EKEQAYQDSVIEDLAEDFRLPIHQKPIENVDLD----DVEQASLDTKLTSSNIGFRLLQK 76
E+E Y+D E E + +P +P D + EQ + D + SNIG ++LQ
Sbjct: 696 EREMKYRDRAAER-REKYGIPEPPEPKRKKQFDAGTVNYEQPTKD-GIDHSNIGNKMLQA 753
Query: 77 MGWK-GKGLGKDEQGIIEPIKSGIRDPKLGVG 107
MGW+ G GLG+ QGI PI++ +R G+G
Sbjct: 754 MGWREGSGLGRKCQGITAPIEAQVRLKGAGLG 785
>sp|P52756|RBM5_HUMAN RNA-binding protein 5 OS=Homo sapiens GN=RBM5 PE=1 SV=2
Length = 815
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 21 EKEQAYQDSVIEDLAEDFRLPIHQKPIENVDLD----DVEQASLDTKLTSSNIGFRLLQK 76
E+E Y+D E E + +P +P D + EQ + D + SNIG ++LQ
Sbjct: 696 EREMKYRDRAAER-REKYGIPEPPEPKRKKQFDAGTVNYEQPTKD-GIDHSNIGNKMLQA 753
Query: 77 MGWK-GKGLGKDEQGIIEPIKSGIRDPKLGVG 107
MGW+ G GLG+ QGI PI++ +R G+G
Sbjct: 754 MGWREGSGLGRKCQGITAPIEAQVRLKGAGLG 785
>sp|Q2KI19|CCD75_BOVIN Coiled-coil domain-containing protein 75 OS=Bos taurus GN=CCDC75
PE=2 SV=2
Length = 260
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 60 LDTKLTSSNIGFRLLQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGVG 107
L L N GF LLQKMG+K G+ LGK GI+EPI ++ K G+G
Sbjct: 63 LKNALGCENKGFALLQKMGYKSGQALGKSGDGIVEPIPLNVKTGKSGIG 111
>sp|Q8CH02|SUGP1_MOUSE SURP and G-patch domain-containing protein 1 OS=Mus musculus
GN=Sugp1 PE=1 SV=1
Length = 643
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 63 KLTSSNIGFRLLQKMGWK-GKGLGKDEQGIIEPIKSG 98
KLT NIG+++L KMGWK G+GLG + QGI P+ G
Sbjct: 557 KLTVENIGYQMLMKMGWKEGEGLGTEGQGIKNPVNKG 593
>sp|Q68FU8|SUGP1_RAT SURP and G-patch domain-containing protein 1 OS=Rattus norvegicus
GN=Sugp1 PE=2 SV=1
Length = 644
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 63 KLTSSNIGFRLLQKMGWK-GKGLGKDEQGIIEPIKSG 98
KLT NIG+++L KMGWK G+GLG + QGI P+ G
Sbjct: 558 KLTVENIGYQMLMKMGWKEGEGLGTEGQGIKNPVNKG 594
>sp|Q8IWZ8|SUGP1_HUMAN SURP and G-patch domain-containing protein 1 OS=Homo sapiens
GN=SUGP1 PE=1 SV=2
Length = 645
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 63 KLTSSNIGFRLLQKMGWK-GKGLGKDEQGIIEPIKSG 98
KLT NIG+++L KMGWK G+GLG + QGI P+ G
Sbjct: 559 KLTVENIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKG 595
>sp|Q6C233|SQS1_YARLI Protein SQS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=SQS1 PE=3 SV=1
Length = 812
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 67 SNIGFRLLQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGVG 107
SNIG LLQKMGW G+GLG +GI EPI + ++ K G+G
Sbjct: 770 SNIGRLLLQKMGWTTGEGLGAQSRGISEPIIAKVKISKRGIG 811
>sp|Q9UTK6|YKR3_SCHPO G-patch domain-containing protein C1486.03 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC1486.03c PE=3
SV=1
Length = 797
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 53 DDVEQASLDTKLTSSNIGF--RLLQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGVGKQ 109
D+V QA K+ + GF ++L+KMG+K G+GLG + +GI EP++S +R ++G+G
Sbjct: 100 DEVSQAKNIPKMKFNTTGFGAKMLEKMGYKQGQGLGANAEGIAEPVQSKLRPERVGLGAV 159
Query: 110 EE 111
E
Sbjct: 160 RE 161
>sp|Q96BK5|PINX1_HUMAN PIN2/TERF1-interacting telomerase inhibitor 1 OS=Homo sapiens
GN=PINX1 PE=1 SV=2
Length = 328
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 67 SNIGFRLLQKMGW-KGKGLGKDEQGIIEPIKSGIRDPKLGVGK--QEEDDFFTAEENIQR 123
S G R+L+KMGW KGKGLG EQG + IK +++ LG+G ED++ +++ +
Sbjct: 27 SKFGQRMLEKMGWSKGKGLGAQEQGATDHIKVQVKNNHLGLGATINNEDNWIAHQDDFNQ 86
Query: 124 RKLDI------EVEDTEENAKKREVLAEREQKI 150
++ E D+ + +K+ E + KI
Sbjct: 87 LLAELNTCHGQETTDSSDKKEKKSFSLEEKSKI 119
>sp|Q8IWX8|CHERP_HUMAN Calcium homeostasis endoplasmic reticulum protein OS=Homo sapiens
GN=CHERP PE=1 SV=3
Length = 916
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 11/71 (15%)
Query: 61 DTKLTSSNIGFRLLQKMGWKGK-GLGKDEQGIIEPIKSG-IRDPKL----GVGKQEEDDF 114
D++L N G ++L KMGW G GLG EQGI +PIK G +RD K GVG +D +
Sbjct: 836 DSRLGEENKGHQMLVKMGWSGSGGLGAKEQGIQDPIKGGDVRD-KWDQYKGVGVALDDPY 894
Query: 115 FTAEENIQRRK 125
EN +R K
Sbjct: 895 ----ENYRRNK 901
>sp|Q9CZX5|PINX1_MOUSE PIN2/TERF1-interacting telomerase inhibitor 1 OS=Mus musculus
GN=Pinx1 PE=2 SV=2
Length = 332
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 67 SNIGFRLLQKMGW-KGKGLGKDEQGIIEPIKSGIRDPKLGVG--KQEEDDFFTAEENI 121
S G ++L+KMGW KGKGLG EQG E IK +++ LG+G ED++ +++
Sbjct: 27 SKFGQKMLEKMGWSKGKGLGAQEQGATEHIKVKVKNNHLGLGATNNNEDNWIAHQDDF 84
>sp|Q8CGZ0|CHERP_MOUSE Calcium homeostasis endoplasmic reticulum protein OS=Mus musculus
GN=Cherp PE=1 SV=1
Length = 936
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 11/71 (15%)
Query: 61 DTKLTSSNIGFRLLQKMGWKGK-GLGKDEQGIIEPIKSG-IRDPKL----GVGKQEEDDF 114
D++L N G ++L KMGW G GLG EQGI +PIK G +RD K GVG +D +
Sbjct: 845 DSRLGEENKGHQMLVKMGWSGSGGLGAKEQGIQDPIKGGDVRD-KWDQYKGVGVALDDPY 903
Query: 115 FTAEENIQRRK 125
EN +R K
Sbjct: 904 ----ENYRRNK 910
>sp|Q6DI35|TFP11_DANRE Tuftelin-interacting protein 11 OS=Danio rerio GN=tfip11 PE=1 SV=1
Length = 832
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Query: 69 IGFRLLQKMGW-KGKGLGKDEQGIIEPIKSGIRDPKLGVG 107
IG +LLQKMG+ GKGLGK+ QGI+ PI++ +R K VG
Sbjct: 151 IGQKLLQKMGYVPGKGLGKNAQGIVNPIEAKLRKGKGAVG 190
>sp|Q66J74|TFP11_XENLA Tuftelin-interacting protein 11 OS=Xenopus laevis GN=tfip11 PE=2
SV=1
Length = 824
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 17/92 (18%)
Query: 69 IGFRLLQKMGW-KGKGLGKDEQGIIEPIKSGIRDPKLGVGKQEEDDFFTAEENIQRRKLD 127
IG +LLQKMG+ G+GLGK+ QGII PI++ R K VG + +E Q K D
Sbjct: 148 IGQKLLQKMGYMPGRGLGKNAQGIIAPIEAKQRRGKGAVGA------YGSERTKQSIK-D 200
Query: 128 IEVEDTEENAKKREVLAEREQKIQTEVKEIRK 159
V D+EE E E+ Q E+ + RK
Sbjct: 201 FPVVDSEE---------EEEKDFQKEMSQWRK 223
>sp|Q9URX9|PXR1_SCHPO Protein pxr1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pxr1 PE=1 SV=1
Length = 284
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 66 SSNIGFRLLQKMGW-KGKGLGKDEQGIIEPIKSGIRDPKLGVGKQEEDDF 114
++ +GF+LL GW G GLG+ + G I IK ++D LG+G + +D
Sbjct: 25 TNRLGFKLLSSYGWVNGNGLGEKQHGRIHNIKVSLKDDTLGIGAKATNDL 74
>sp|A4UMC6|TFP11_MONDO Tuftelin-interacting protein 11 OS=Monodelphis domestica GN=TFIP11
PE=2 SV=1
Length = 834
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 66 SSNIGFRLLQKMGW-KGKGLGKDEQGIIEPIKSGIRDPKLGVG 107
+ IG +LLQKMG+ GKGLGK+ QGII PI++ R K VG
Sbjct: 148 TKGIGQKLLQKMGYVPGKGLGKNAQGIINPIEAKQRKGKGAVG 190
>sp|A8XYX3|MTR1B_CAEBR Inactive cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1B
OS=Caenorhabditis briggsae GN=CBG20907 PE=3 SV=2
Length = 846
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 74 LQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGVGKQEEDD 113
+++MG+K G+GLGK++QGI EPI R+ K G+G ++ DD
Sbjct: 52 MERMGYKAGEGLGKNKQGIQEPIAISFREGKAGLGHEQWDD 92
>sp|Q5U2Y6|TFP11_RAT Tuftelin-interacting protein 11 OS=Rattus norvegicus GN=Tfip11 PE=2
SV=1
Length = 837
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 66 SSNIGFRLLQKMGW-KGKGLGKDEQGIIEPIKSGIRDPKLGVG 107
+ IG +LLQKMG+ G+GLGK+ QGII PI++ R K VG
Sbjct: 149 TKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
>sp|Q0IIX9|TFP11_XENTR Tuftelin-interacting protein 11 OS=Xenopus tropicalis GN=tfip11
PE=2 SV=2
Length = 825
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Query: 69 IGFRLLQKMGW-KGKGLGKDEQGIIEPIKSGIRDPKLGVG 107
IG +LLQKMG+ +G+GLGK+ QGII PI++ R K VG
Sbjct: 148 IGQKLLQKMGYVQGRGLGKNAQGIIAPIEAKQRKGKGAVG 187
>sp|Q29RR5|TFP11_BOVIN Tuftelin-interacting protein 11 OS=Bos taurus GN=TFIP11 PE=2 SV=2
Length = 837
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 66 SSNIGFRLLQKMGW-KGKGLGKDEQGIIEPIKSGIRDPKLGVG 107
+ IG +LLQKMG+ G+GLGK+ QGII PI++ R K VG
Sbjct: 149 TKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
>sp|Q9ERA6|TFP11_MOUSE Tuftelin-interacting protein 11 OS=Mus musculus GN=Tfip11 PE=1 SV=1
Length = 838
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 66 SSNIGFRLLQKMGW-KGKGLGKDEQGIIEPIKSGIRDPKLGVG 107
+ IG +LLQKMG+ G+GLGK+ QGII PI++ R K VG
Sbjct: 150 TKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 192
>sp|A1XD97|TFP11_CANFA Tuftelin-interacting protein 11 OS=Canis familiaris GN=TFIP11 PE=2
SV=1
Length = 837
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 66 SSNIGFRLLQKMGW-KGKGLGKDEQGIIEPIKSGIRDPKLGVG 107
+ IG +LLQKMG+ G+GLGK+ QGII PI++ R K VG
Sbjct: 149 TKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
>sp|Q5R5K8|TFP11_PONAB Tuftelin-interacting protein 11 OS=Pongo abelii GN=TFIP11 PE=2 SV=1
Length = 837
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 66 SSNIGFRLLQKMGW-KGKGLGKDEQGIIEPIKSGIRDPKLGVG 107
+ IG +LLQKMG+ G+GLGK+ QGII PI++ R K VG
Sbjct: 149 TKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
>sp|A1XD93|TFP11_PANTR Tuftelin-interacting protein 11 OS=Pan troglodytes GN=TFIP11 PE=2
SV=1
Length = 837
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 66 SSNIGFRLLQKMGW-KGKGLGKDEQGIIEPIKSGIRDPKLGVG 107
+ IG +LLQKMG+ G+GLGK+ QGII PI++ R K VG
Sbjct: 149 TKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
>sp|A1XD94|TFP11_MACMU Tuftelin-interacting protein 11 OS=Macaca mulatta GN=TFIP11 PE=2
SV=1
Length = 837
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 66 SSNIGFRLLQKMGW-KGKGLGKDEQGIIEPIKSGIRDPKLGVG 107
+ IG +LLQKMG+ G+GLGK+ QGII PI++ R K VG
Sbjct: 149 TKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
>sp|Q9UBB9|TFP11_HUMAN Tuftelin-interacting protein 11 OS=Homo sapiens GN=TFIP11 PE=1 SV=1
Length = 837
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 66 SSNIGFRLLQKMGW-KGKGLGKDEQGIIEPIKSGIRDPKLGVG 107
+ IG +LLQKMG+ G+GLGK+ QGII PI++ R K VG
Sbjct: 149 TKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
>sp|Q06AK6|TFP11_PIG Tuftelin-interacting protein 11 OS=Sus scrofa GN=TFIP11 PE=2 SV=1
Length = 836
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 66 SSNIGFRLLQKMGW-KGKGLGKDEQGIIEPIKSGIRDPKLGVG 107
+ IG +LLQKMG+ G+GLGK+ QGII PI++ R K VG
Sbjct: 149 TKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVG 191
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.128 0.353
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,141,013
Number of Sequences: 539616
Number of extensions: 5060336
Number of successful extensions: 78866
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 1380
Number of HSP's that attempted gapping in prelim test: 37891
Number of HSP's gapped (non-prelim): 17572
length of query: 310
length of database: 191,569,459
effective HSP length: 117
effective length of query: 193
effective length of database: 128,434,387
effective search space: 24787836691
effective search space used: 24787836691
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)