BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021583
(310 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225464623|ref|XP_002274318.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21190
[Vitis vinifera]
gi|302143769|emb|CBI22630.3| unnamed protein product [Vitis vinifera]
Length = 295
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/301 (69%), Positives = 241/301 (80%), Gaps = 16/301 (5%)
Query: 1 MLSLSYSLPPFTKIFEPIKISRNARSLVVCAARGPRPRYPRVWKARKRIGTISKSAKLVT 60
ML L YS T+ + ++I +N RS+VVC A+GPRPRYPRVWK R+RIGTISKSAKLV
Sbjct: 1 MLCLRYSPATITRRLDAVEIPKNPRSIVVCGAKGPRPRYPRVWKTRQRIGTISKSAKLVD 60
Query: 61 CIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQG 120
CIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE++K+WKRIIQVTKWMLSKGQG
Sbjct: 61 CIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEDQKEWKRIIQVTKWMLSKGQG 120
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
RTMG+YF LLNALAEDGRLDEAEELWTK+F ++LE PR+F+DKMISIYY R MHEKMFE
Sbjct: 121 RTMGSYFTLLNALAEDGRLDEAEELWTKLFSENLESLPRVFYDKMISIYYRRDMHEKMFE 180
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAK 240
IFADMEELG+RPN SIV M+G+ FQKLGMLDKYEKL+KKYPPPKWEYRYIKGKRVRI AK
Sbjct: 181 IFADMEELGIRPNTSIVKMVGDVFQKLGMLDKYEKLQKKYPPPKWEYRYIKGKRVRIRAK 240
Query: 241 PKYELDSATEGKTNEVETTKNPNESSEEPEAAANLNESLEETEANTKELLEEADAISNES 300
E D E ES + EA +N+ E N+ E+ +EAD+ +++
Sbjct: 241 LTGESDDPGEA------------ESDDPGEAVNEINDKTE----NSNEMHDEADSSVDDA 284
Query: 301 D 301
D
Sbjct: 285 D 285
>gi|449445975|ref|XP_004140747.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Cucumis sativus]
Length = 331
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/307 (64%), Positives = 241/307 (78%), Gaps = 5/307 (1%)
Query: 1 MLSLSYSLPPFTKIFEPIKISRNARSLVVCAARGPRPRYPRVWKARKRIGTISKSAKLVT 60
ML+L Y+ P +K E + S S VVCAA+GPRPRYPRVWK +KRIGTISK+AKLV
Sbjct: 19 MLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVD 78
Query: 61 CIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQG 120
C+KGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN+++WKRIIQ+TKWMLSKGQG
Sbjct: 79 CVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQG 138
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
RTMG+YF LLNALAEDGRLDEAEELW K+F HLE PRIFF KMIS+YY++ MH+K+FE
Sbjct: 139 RTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFE 198
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAK 240
+FADMEELGV+PN++IV+ +GN FQ+LGMLDKY+KL KKYPPPKWEYRYIKGKRV+I AK
Sbjct: 199 VFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAK 258
Query: 241 PKYELDSATEGKTNEVETTKNPNESSEEPEAAANLNESLEETEANTKELLEEADAISNES 300
E ++ G + + + S +E E + + SLE+ E ++ E+ D I +
Sbjct: 259 YLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSE-DSSLEDDE----DMSEDPDEILEDE 313
Query: 301 DISSTSN 307
+ S SN
Sbjct: 314 HMWSKSN 320
>gi|297799952|ref|XP_002867860.1| EMB1417 [Arabidopsis lyrata subsp. lyrata]
gi|297313696|gb|EFH44119.1| EMB1417 [Arabidopsis lyrata subsp. lyrata]
Length = 317
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/273 (68%), Positives = 219/273 (80%), Gaps = 13/273 (4%)
Query: 1 MLSLSYSLPPF--------TKIFEPIKISRNARSLVVCAARGPRPRYPRVWKARKRIGTI 52
MLSL YSLP TK+F S+ ++VVCAARGPRPR PRVWK RKRIGTI
Sbjct: 1 MLSLRYSLPYLLLQTKESSTKLF-----SKRPNNVVVCAARGPRPRSPRVWKTRKRIGTI 55
Query: 53 SKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTK 112
SK+AK++ CIKGLSNVKEEVYGALDSFIAWELEFPL+ VKKAL LE+EK+WK+IIQVTK
Sbjct: 56 SKAAKMIACIKGLSNVKEEVYGALDSFIAWELEFPLVIVKKALVILEDEKEWKKIIQVTK 115
Query: 113 WMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNR 172
WMLSKGQGRTMGTYF LLNALAED RLDEAEELW K+F++HLEGTPR FF+KMISIYY R
Sbjct: 116 WMLSKGQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKFFNKMISIYYKR 175
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKG 232
MH+K+FE+FADMEELGV+PN++IVSM+G F KL M DKYEKL KKYPPP+WE+RYIKG
Sbjct: 176 DMHQKLFEVFADMEELGVKPNIAIVSMVGKVFVKLEMKDKYEKLMKKYPPPQWEFRYIKG 235
Query: 233 KRVRIPAKPKYELDSATEGKTNEVETTKNPNES 265
+RV++ AK EL G +++ + ES
Sbjct: 236 RRVKVKAKQLNELSEGEGGLSSDEDKIDTEIES 268
>gi|18415645|ref|NP_567622.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75246109|sp|Q8LG95.1|PP332_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g21190; AltName: Full=Protein EMBRYO DEFECTIVE 1417
gi|21618230|gb|AAM67280.1| unknown [Arabidopsis thaliana]
gi|51969238|dbj|BAD43311.1| putative protein [Arabidopsis thaliana]
gi|51971351|dbj|BAD44340.1| putative protein [Arabidopsis thaliana]
gi|51971365|dbj|BAD44347.1| putative protein [Arabidopsis thaliana]
gi|332659017|gb|AEE84417.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 307
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/269 (69%), Positives = 218/269 (81%), Gaps = 13/269 (4%)
Query: 1 MLSLSYSLPPF--------TKIFEPIKISRNARSLVVCAARGPRPRYPRVWKARKRIGTI 52
MLSL YSLP TK+F ++ ++VVCAARGPRPR PRVWK RKRIGTI
Sbjct: 1 MLSLRYSLPYLLLQTRESSTKLF-----TKKPNNVVVCAARGPRPRSPRVWKTRKRIGTI 55
Query: 53 SKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTK 112
SK+AK++ CIKGLSNVKEEVYGALDSFIAWELEFPL+ VKKAL LE+EK+WK+IIQVTK
Sbjct: 56 SKAAKMIACIKGLSNVKEEVYGALDSFIAWELEFPLVIVKKALVILEDEKEWKKIIQVTK 115
Query: 113 WMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNR 172
WMLSKGQGRTMGTYF LLNALAED RLDEAEELW K+F++HLEGTPR FF+KMISIYY R
Sbjct: 116 WMLSKGQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKFFNKMISIYYKR 175
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKG 232
MH+K+FE+FADMEELGV+PNV+IVSM+G F KL M DKYEKL KKYPPP+WE+RYIKG
Sbjct: 176 DMHQKLFEVFADMEELGVKPNVAIVSMVGKVFVKLEMKDKYEKLMKKYPPPQWEFRYIKG 235
Query: 233 KRVRIPAKPKYELDSATEGKTNEVETTKN 261
+RV++ AK EL G +++ + N
Sbjct: 236 RRVKVKAKQLNELSEGEGGLSSDEDKIDN 264
>gi|356559734|ref|XP_003548152.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Glycine max]
Length = 343
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/299 (62%), Positives = 232/299 (77%), Gaps = 13/299 (4%)
Query: 1 MLSLSYSLPPFTKIFEPIKISRNARSLVVCAARGPRPRYPRVWKARKRIGTISKSAKLVT 60
ML+L+ S K FE IKI + R V+CAA+G RPRYPRVWK K+IGTISK+AKLV
Sbjct: 1 MLALTDSPLLIAKTFEAIKIPTSTRGTVLCAAKGQRPRYPRVWKTHKKIGTISKAAKLVN 60
Query: 61 CIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQG 120
IK LSNVKEEVYGALDS++AWELEFPLITVKKALKTLE+E++WKR+IQVTKWMLSKGQG
Sbjct: 61 SIKELSNVKEEVYGALDSYVAWELEFPLITVKKALKTLESEQEWKRVIQVTKWMLSKGQG 120
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
+TMG+YF LLNAL ED RLDEAEELWTK+ + ++E PR FFDKMISIY+ RGMHEKMFE
Sbjct: 121 KTMGSYFTLLNALVEDDRLDEAEELWTKLLMQYMESLPRRFFDKMISIYHKRGMHEKMFE 180
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAK 240
IFADMEEL +RPN+++VSM+G+AF++LGMLDKY+KL KYPPP+WEYRYI+GKRV++
Sbjct: 181 IFADMEELCLRPNIAVVSMIGDAFKELGMLDKYQKLHAKYPPPQWEYRYIRGKRVKV--- 237
Query: 241 PKYELDSATEGKTNEVETTKNPNESSEEPEAAANLNESLEE--TEANTKELLEEADAIS 297
E ++N+V T + EP + N N L E +E ++L ++A+ IS
Sbjct: 238 -------KVEVQSNQVNTYIE-RHGNVEPNSDLNKNYRLSEKTSEIVDQQLRQDANVIS 288
>gi|356530814|ref|XP_003533975.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Glycine max]
Length = 343
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/312 (61%), Positives = 233/312 (74%), Gaps = 18/312 (5%)
Query: 1 MLSLSYSLPPFTKIFEPIKISRNARSLVVCAARGPRPRYPRVWKARKRIGTISKSAKLVT 60
ML+L+ S K FE KI + R VVCAA+GPRPRYPRVWK K+IGTISK+AKLV
Sbjct: 1 MLALTDSPLLIAKTFEATKIPTSTRGTVVCAAKGPRPRYPRVWKTHKKIGTISKAAKLVK 60
Query: 61 CIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQG 120
IK LSNVKEEVYGALDS++AWELEFPLITVKKALKTLE E+DWKR+IQ+TKWMLSKGQG
Sbjct: 61 SIKELSNVKEEVYGALDSYVAWELEFPLITVKKALKTLEFEQDWKRVIQITKWMLSKGQG 120
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
+TMG+YF LLNAL ED RLDEAEELWTK+ + ++E PR FFDKMISIY+ RGMHEKMFE
Sbjct: 121 KTMGSYFTLLNALVEDDRLDEAEELWTKLLMQYMESLPRRFFDKMISIYHKRGMHEKMFE 180
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAK 240
IFADMEEL +RPN+ +VSM+G+AF++ GMLDKY KL KYPPP+WEYRYI+GKRV++
Sbjct: 181 IFADMEELCLRPNIVVVSMIGDAFKERGMLDKYLKLHAKYPPPQWEYRYIRGKRVKV--- 237
Query: 241 PKYELDSATEGKTNEVETTKNPNESSEEPEAAANLNESLEETEANT----KELLEEADAI 296
K E+ S+ E PN ++LN+ +E + ++L ++AD I
Sbjct: 238 -KVEVQSSQVNTYIERHGNVEPN---------SDLNKDYRSSEKTSETVDQQLRQDADVI 287
Query: 297 SNESD-ISSTSN 307
S E + IS +N
Sbjct: 288 SMEPERISDINN 299
>gi|255545154|ref|XP_002513638.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547546|gb|EEF49041.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 359
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/274 (74%), Positives = 219/274 (79%), Gaps = 1/274 (0%)
Query: 1 MLSLSYSLPPFTKIFEPIKISRNARSLVVCAARGPRPRYPRVWKARKRIGTISKSAKLVT 60
ML L LP + FE IK S++ S VV A +G RPR PRVWK + RIGTISKSAKLV
Sbjct: 35 MLCLRPPLPLISTRFEVIKFSKSTSS-VVSALKGARPRAPRVWKTKPRIGTISKSAKLVE 93
Query: 61 CIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQG 120
CIKGLSNVKEEVYGALDS IAWELEFPLI VKKALKTLENE++WKRIIQV KWMLSKGQG
Sbjct: 94 CIKGLSNVKEEVYGALDSLIAWELEFPLIAVKKALKTLENEQEWKRIIQVIKWMLSKGQG 153
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
RTMGTYF LLNALAED RLDEAEELWTK+F D+LEGTPR FFDKMISIYY R MHEKMFE
Sbjct: 154 RTMGTYFTLLNALAEDERLDEAEELWTKLFSDNLEGTPRNFFDKMISIYYKREMHEKMFE 213
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAK 240
IFADMEELGVRP+VSIV+MMG+ FQKLGMLDKY KLKKKYPPPKWEYRYIKGKRVR+ AK
Sbjct: 214 IFADMEELGVRPSVSIVNMMGSVFQKLGMLDKYRKLKKKYPPPKWEYRYIKGKRVRLRAK 273
Query: 241 PKYELDSATEGKTNEVETTKNPNESSEEPEAAAN 274
E A E ET N+ +EE N
Sbjct: 274 QVNEFLGANESVNQNAETPYISNKLNEEDNTKLN 307
>gi|255646324|gb|ACU23645.1| unknown [Glycine max]
Length = 343
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/312 (60%), Positives = 232/312 (74%), Gaps = 18/312 (5%)
Query: 1 MLSLSYSLPPFTKIFEPIKISRNARSLVVCAARGPRPRYPRVWKARKRIGTISKSAKLVT 60
ML+L+ S K FE KI + R VVCAA+GPRPRYPRVWK K+IGTISK+AKLV
Sbjct: 1 MLALTDSPLLIAKTFEATKIPTSTRGTVVCAAKGPRPRYPRVWKTHKKIGTISKAAKLVK 60
Query: 61 CIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQG 120
IK LSNVKEEVYGALDS++AWELEFPLITVKKALKTLE E+DWKR+IQ+TKWMLSKGQG
Sbjct: 61 SIKELSNVKEEVYGALDSYVAWELEFPLITVKKALKTLEFEQDWKRVIQITKWMLSKGQG 120
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
+TMG+YF LLNAL ED RLDEAEELWTK+ + ++E PR FFDKMISIY+ RGMHEKMFE
Sbjct: 121 KTMGSYFTLLNALVEDDRLDEAEELWTKLLMQYMESLPRRFFDKMISIYHKRGMHEKMFE 180
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAK 240
IFADMEEL +RPN+ +VSM+G+AF++ G LDKY KL KYPPP+WEYRYI+GKRV++
Sbjct: 181 IFADMEELCLRPNIVVVSMIGDAFKERGTLDKYLKLHAKYPPPQWEYRYIRGKRVKV--- 237
Query: 241 PKYELDSATEGKTNEVETTKNPNESSEEPEAAANLNESLEETEANT----KELLEEADAI 296
K E+ S+ E PN ++LN+ +E + ++L ++AD I
Sbjct: 238 -KVEVQSSQVNTYIERHGNVEPN---------SDLNKDYRSSEKTSETVDQQLRQDADVI 287
Query: 297 SNESD-ISSTSN 307
S E + IS +N
Sbjct: 288 SMEPERISDINN 299
>gi|2911076|emb|CAA17538.1| putative protein [Arabidopsis thaliana]
gi|7268916|emb|CAB79119.1| putative protein [Arabidopsis thaliana]
Length = 325
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/239 (73%), Positives = 201/239 (84%), Gaps = 6/239 (2%)
Query: 29 VCAARGPRPRYPRVWKARKRIGTISKSAKLVTC------IKGLSNVKEEVYGALDSFIAW 82
VCAARGPRPR PRVWK RKRIGTISK+AK++ C IKGLSNVKEEVYGALDSFIAW
Sbjct: 44 VCAARGPRPRSPRVWKTRKRIGTISKAAKMIACVMLSSYIKGLSNVKEEVYGALDSFIAW 103
Query: 83 ELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEA 142
ELEFPL+ VKKAL LE+EK+WK+IIQVTKWMLSKGQGRTMGTYF LLNALAED RLDEA
Sbjct: 104 ELEFPLVIVKKALVILEDEKEWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEA 163
Query: 143 EELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGN 202
EELW K+F++HLEGTPR FF+KMISIYY R MH+K+FE+FADMEELGV+PNV+IVSM+G
Sbjct: 164 EELWNKLFMEHLEGTPRKFFNKMISIYYKRDMHQKLFEVFADMEELGVKPNVAIVSMVGK 223
Query: 203 AFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSATEGKTNEVETTKN 261
F KL M DKYEKL KKYPPP+WE+RYIKG+RV++ AK EL G +++ + N
Sbjct: 224 VFVKLEMKDKYEKLMKKYPPPQWEFRYIKGRRVKVKAKQLNELSEGEGGLSSDEDKIDN 282
>gi|357136512|ref|XP_003569848.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Brachypodium distachyon]
Length = 296
Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 184/287 (64%), Positives = 218/287 (75%), Gaps = 11/287 (3%)
Query: 1 MLSLSYSLPPFTKIFEPIKISRNAR--SLVVCAARGPRPRYPRVWKARKRIGTISKSAKL 58
MLSL Y P F E + + S+VVC ARGPRPRYPRVWKA KRIGT+SKS KL
Sbjct: 1 MLSLKYGTPTFGLALERTAVPHTQKFSSVVVCGARGPRPRYPRVWKADKRIGTVSKSQKL 60
Query: 59 VTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKG 118
V CIK LSNVKEEVYGALDSF+AWELEFPLI VKKALKTLE+EK+WKRIIQV KWM +KG
Sbjct: 61 VKCIKDLSNVKEEVYGALDSFVAWELEFPLIAVKKALKTLEDEKEWKRIIQVIKWMFNKG 120
Query: 119 QGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKM 178
QG+TMG+Y+ LLNAL EDGR++EAEEL+ KIF ++EG PR FF ++IS+YY+ G ++K+
Sbjct: 121 QGKTMGSYYTLLNALIEDGRVEEAEELFGKIFSRYMEGLPRTFFMRIISLYYSLGSYQKI 180
Query: 179 FEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIP 238
FE+FADMEELGVRP+ SIV M+G FQKL M DKYEKL KKYPPPK EYRYIKGKR+R+
Sbjct: 181 FEVFADMEELGVRPDRSIVRMLGQVFQKLEMFDKYEKLIKKYPPPKIEYRYIKGKRIRLK 240
Query: 239 AKPKYELDSATEGKTNEVETTKNPNESSEEPEAAANLNESLEETEAN 285
P D++TE TN+ T E EE E NL++ LEE +
Sbjct: 241 IYP----DNSTEEATNKYSAT----EELEEAE-GINLDKKLEEAAST 278
>gi|224134835|ref|XP_002327501.1| predicted protein [Populus trichocarpa]
gi|222836055|gb|EEE74476.1| predicted protein [Populus trichocarpa]
Length = 229
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 175/212 (82%), Positives = 197/212 (92%)
Query: 29 VCAARGPRPRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPL 88
VCAA+GPRPRYPRVWK ++RIGTISKSAKLV CIKGLSNVKEEVYGALDSF+AWELEFPL
Sbjct: 1 VCAAKGPRPRYPRVWKTKRRIGTISKSAKLVDCIKGLSNVKEEVYGALDSFVAWELEFPL 60
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
I VKKAL+ LE +++WKRIIQVTKWMLSKGQGRTMGTYF L+NALAEDGRLDE EELWTK
Sbjct: 61 IAVKKALRALEEQQEWKRIIQVTKWMLSKGQGRTMGTYFTLMNALAEDGRLDEVEELWTK 120
Query: 149 IFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+F +LEGTPR+ FDKMISIYY R MH+++FEIFADMEELG+RP+VSIV+M+GN FQ+LG
Sbjct: 121 LFSQYLEGTPRMMFDKMISIYYKRDMHDQIFEIFADMEELGLRPSVSIVNMVGNVFQRLG 180
Query: 209 MLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAK 240
M+DKYEKLKKKYPPPKW YRYIKGKRVR+ AK
Sbjct: 181 MMDKYEKLKKKYPPPKWIYRYIKGKRVRVRAK 212
>gi|226498486|ref|NP_001150239.1| EMB1417 [Zea mays]
gi|195637738|gb|ACG38337.1| EMB1417 [Zea mays]
Length = 296
Score = 353 bits (907), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 174/272 (63%), Positives = 216/272 (79%), Gaps = 3/272 (1%)
Query: 17 PIKISRNARSLVVCAARGPRPRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGAL 76
P++ S+VVC ARGPRPRYPRVWK RK+IGTISKS KLV CIKGLSNVKEEVYGAL
Sbjct: 19 PVRHHIKFNSIVVCGARGPRPRYPRVWKTRKKIGTISKSQKLVECIKGLSNVKEEVYGAL 78
Query: 77 DSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAED 136
DSF+AWELEFPLI VKKALK LE+EK+WKRIIQV KWM +KGQG+TMG+Y+ LLNAL ED
Sbjct: 79 DSFVAWELEFPLIVVKKALKKLEDEKEWKRIIQVIKWMFNKGQGKTMGSYYTLLNALIED 138
Query: 137 GRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSI 196
GR++EAEEL+ +F ++EG PR FF +MIS YYN ++ MFEIFADMEELGVRP+ SI
Sbjct: 139 GRIEEAEELFGMVFSRYMEGLPRTFFMRMISFYYNVEAYDNMFEIFADMEELGVRPDGSI 198
Query: 197 VSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSATEG--KTN 254
+ M+G+ FQKL M+DKYEKLKKKY PPKWEYR+IKGKR+RI P + A +G T+
Sbjct: 199 IRMLGDVFQKLEMMDKYEKLKKKYRPPKWEYRHIKGKRIRIRVYPDSNPEVAAKGDPDTD 258
Query: 255 EVETTKNPNESSEEPEAAAN-LNESLEETEAN 285
E+E ++ + ++E EAA++ L+ S+ + A+
Sbjct: 259 ELEELESTHLNNELDEAASSGLDRSVLDDAAS 290
>gi|218189084|gb|EEC71511.1| hypothetical protein OsI_03797 [Oryza sativa Indica Group]
Length = 295
Score = 343 bits (880), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 182/276 (65%), Positives = 216/276 (78%), Gaps = 3/276 (1%)
Query: 1 MLSLSYSLPPFTKIFEPIKISRNAR--SLVVCAARGPRPRYPRVWKARKRIGTISKSAKL 58
M S+ P F E I+ ++ +LVVC ARGPRPRYPRVWK RKRIGT+SKS KL
Sbjct: 1 MFSVRCGPPAFAFGLERAAITHPSKFSTLVVCGARGPRPRYPRVWKTRKRIGTVSKSQKL 60
Query: 59 VTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKG 118
V C+KGLSNVKEEVYGALDSF+AWELEFPLI VKKALKTLE+EK+WKRIIQV KWM +KG
Sbjct: 61 VECVKGLSNVKEEVYGALDSFVAWELEFPLIAVKKALKTLEDEKEWKRIIQVIKWMFNKG 120
Query: 119 QGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKM 178
QG+TMG+Y+ LLNAL EDGR++EAEEL+ K F +LEG PR FF +MIS+YY ++KM
Sbjct: 121 QGKTMGSYYTLLNALIEDGRVEEAEELYGKTFSRYLEGLPRTFFMRMISLYYRLESYQKM 180
Query: 179 FEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIP 238
FEIFADMEELGVRP+ SI+ M+G FQKLGMLDKY KLKKKYPPPKWEYR+IKGKR+R+
Sbjct: 181 FEIFADMEELGVRPDGSIIRMLGEVFQKLGMLDKYVKLKKKYPPPKWEYRHIKGKRIRVK 240
Query: 239 AKPKYELDSATEG-KTNEVETTKNPNESSEEPEAAA 273
PK E++ T+EVE +N + SE EAA+
Sbjct: 241 VYPKDEIEEPMRNPGTDEVEEEENMDVDSELEEAAS 276
>gi|222619272|gb|EEE55404.1| hypothetical protein OsJ_03510 [Oryza sativa Japonica Group]
Length = 295
Score = 343 bits (880), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 182/276 (65%), Positives = 216/276 (78%), Gaps = 3/276 (1%)
Query: 1 MLSLSYSLPPFTKIFEPIKISRNAR--SLVVCAARGPRPRYPRVWKARKRIGTISKSAKL 58
M S+ P F E I+ ++ +LVVC ARGPRPRYPRVWK RKRIGT+SKS KL
Sbjct: 1 MFSVRCGPPAFAFGLERAAITHPSKFSTLVVCGARGPRPRYPRVWKTRKRIGTVSKSQKL 60
Query: 59 VTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKG 118
V C+KGLSNVKEEVYGALDSF+AWELEFPLI VKKALKTLE+EK+WKRIIQV KWM +KG
Sbjct: 61 VECVKGLSNVKEEVYGALDSFVAWELEFPLIAVKKALKTLEDEKEWKRIIQVIKWMFNKG 120
Query: 119 QGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKM 178
QG+TMG+Y+ LLNAL EDGR++EAEEL+ KIF +LEG P FF +MIS+YY ++KM
Sbjct: 121 QGKTMGSYYTLLNALIEDGRVEEAEELYGKIFSRYLEGLPHTFFMRMISLYYRLESYQKM 180
Query: 179 FEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIP 238
FEIFADMEELGVRP+ SI+ M+G FQKLGMLDKY KLKKKYPPPKWEYR IKGKR+R+
Sbjct: 181 FEIFADMEELGVRPDGSIIRMLGEVFQKLGMLDKYVKLKKKYPPPKWEYRRIKGKRIRVK 240
Query: 239 AKPKYELDSAT-EGKTNEVETTKNPNESSEEPEAAA 273
PK E++ + T+EVE +N + SE EAA+
Sbjct: 241 VYPKDEIEEPMRKAGTDEVEEEENMDVDSELEEAAS 276
>gi|226493814|ref|NP_001140314.1| uncharacterized protein LOC100272359 [Zea mays]
gi|194698952|gb|ACF83560.1| unknown [Zea mays]
gi|224032859|gb|ACN35505.1| unknown [Zea mays]
gi|414880433|tpg|DAA57564.1| TPA: hypothetical protein ZEAMMB73_276663 [Zea mays]
gi|414880434|tpg|DAA57565.1| TPA: hypothetical protein ZEAMMB73_276663 [Zea mays]
gi|414880435|tpg|DAA57566.1| TPA: hypothetical protein ZEAMMB73_276663 [Zea mays]
Length = 296
Score = 340 bits (872), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 178/281 (63%), Positives = 218/281 (77%), Gaps = 8/281 (2%)
Query: 5 SYSLPPFTKIFE-PIKISRNARSLVVCAARGPRPRYPRVWKARKRIGTISKSAKLVTCIK 63
+Y P F + E P++ +VVC ARGPRPRYPRVWK RK+IGTISKS KLV CIK
Sbjct: 6 NYWSPAFASVKEGPVRHHIKFNCVVVCGARGPRPRYPRVWKTRKKIGTISKSQKLVECIK 65
Query: 64 GLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTM 123
GLSNVKEEVYGALDSF+AWELEFPLI VKKALK LE+EK+WKRIIQV KWM +KGQG+TM
Sbjct: 66 GLSNVKEEVYGALDSFVAWELEFPLIVVKKALKKLEDEKEWKRIIQVIKWMFNKGQGKTM 125
Query: 124 GTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFA 183
G+Y+ LLNAL EDGR++EAEEL+ +F ++EG PR FF ++IS YY+ G H+KMFEIFA
Sbjct: 126 GSYYTLLNALIEDGRIEEAEELFRMVFSRYMEGLPRTFFMRIISFYYSAGEHDKMFEIFA 185
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKY 243
DMEELGVRP+ SI+ M+G+ FQK+ M+DKYEKLKKKYPPPKWEYRYIKGKR+RI P
Sbjct: 186 DMEELGVRPDGSIIRMLGDVFQKIEMMDKYEKLKKKYPPPKWEYRYIKGKRIRIRVYPDS 245
Query: 244 ELDSATEGKTN-----EVETTKNPNESSEEPEAAANLNESL 279
+ + +G + EVE+ + NE E EA++ L+ S+
Sbjct: 246 KTEETAKGDHDNDELGEVESIQLDNELEE--EASSGLDRSV 284
>gi|242058741|ref|XP_002458516.1| hypothetical protein SORBIDRAFT_03g035040 [Sorghum bicolor]
gi|241930491|gb|EES03636.1| hypothetical protein SORBIDRAFT_03g035040 [Sorghum bicolor]
Length = 296
Score = 337 bits (864), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 175/273 (64%), Positives = 217/273 (79%), Gaps = 3/273 (1%)
Query: 5 SYSLPPFTKIFE-PIKISRNARSLVVCAARGPRPRYPRVWKARKRIGTISKSAKLVTCIK 63
SY P F I + P++ S+VVC RGPRPRYPRVWK +K+IGTISKS KLV CIK
Sbjct: 6 SYWSPAFASIKDGPVRHQIKFNSVVVCGVRGPRPRYPRVWKTQKKIGTISKSQKLVECIK 65
Query: 64 GLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTM 123
GLSNVKEEVYGALDSF+AWELEFPLI VKKAL+ LE EK+WKRIIQV KWM +KGQG+TM
Sbjct: 66 GLSNVKEEVYGALDSFVAWELEFPLIVVKKALQKLEGEKEWKRIIQVIKWMFNKGQGKTM 125
Query: 124 GTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFA 183
G+Y+ LLNAL EDGR++EAEEL+ +F ++EG PR FF +MIS YY+ G ++KMFEIFA
Sbjct: 126 GSYYTLLNALIEDGRIEEAEELFGMVFSRYMEGLPRTFFMRMISFYYSVGAYDKMFEIFA 185
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKY 243
DMEELGVRP+ SI+ M+G+ FQKL M+DKYEKLKKKYPPPKWEYRYIKGKR+R+ P
Sbjct: 186 DMEELGVRPDGSIIRMLGDVFQKLEMMDKYEKLKKKYPPPKWEYRYIKGKRIRMRVYPDN 245
Query: 244 ELDSATEG--KTNEVETTKNPNESSEEPEAAAN 274
+ + AT+G T+E+E ++ + ++E EA ++
Sbjct: 246 KTEEATKGDPDTDELEEVESMHLNNELEEATSS 278
>gi|413952394|gb|AFW85043.1| EMB1417 [Zea mays]
Length = 296
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/272 (63%), Positives = 218/272 (80%), Gaps = 3/272 (1%)
Query: 17 PIKISRNARSLVVCAARGPRPRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGAL 76
P++ S+VVC ARGPRPRYPRVWK RK+IGTISKS KLV CIKGLSNVKEEVYGAL
Sbjct: 19 PVRHHIKFNSVVVCGARGPRPRYPRVWKTRKKIGTISKSQKLVECIKGLSNVKEEVYGAL 78
Query: 77 DSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAED 136
DSF+AWELEFPLI VKKALK LE+EK+WKRIIQV KWM +KGQG+TMG+Y+ LLNAL ED
Sbjct: 79 DSFVAWELEFPLIVVKKALKKLEDEKEWKRIIQVIKWMFNKGQGKTMGSYYTLLNALIED 138
Query: 137 GRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSI 196
GR++EAEEL+ +F ++EG PR FF +MIS YY+ ++KMFEIFADMEELGVRP+ SI
Sbjct: 139 GRIEEAEELFGMVFSRYMEGLPRTFFMRMISFYYSVEAYDKMFEIFADMEELGVRPDGSI 198
Query: 197 VSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSATEG--KTN 254
+ M+G+ FQKL M+DKYEKLKKKYPPPKW+YR+IKGKR+RI P + A +G T+
Sbjct: 199 IRMLGDVFQKLEMMDKYEKLKKKYPPPKWDYRHIKGKRIRIRVYPDSNPEVAAKGDPDTD 258
Query: 255 EVETTKNPNESSEEPEAAAN-LNESLEETEAN 285
E+E ++ + ++E EAA++ L+ S+ + A+
Sbjct: 259 ELEELESTHLNNELDEAASSGLDRSVLDDAAS 290
>gi|449485591|ref|XP_004157218.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Cucumis sativus]
Length = 258
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 161/247 (65%), Positives = 196/247 (79%), Gaps = 5/247 (2%)
Query: 61 CIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQG 120
+KGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN+++WKRIIQ+TKWMLSKGQG
Sbjct: 6 MVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQG 65
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
RTMG+YF LLNALAEDGRLDEAEELW K+F HLE PRIFF KMIS+YY++ MH+K+FE
Sbjct: 66 RTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKLFE 125
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAK 240
+FADMEELGV+PN++IV+ +GN FQ+LGMLDKY+KL KKYPPPKWEYRYIKGKRV+I AK
Sbjct: 126 VFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIRAK 185
Query: 241 PKYELDSATEGKTNEVETTKNPNESSEEPEAAANLNESLEETEANTKELLEEADAISNES 300
E ++ G + + + S +E E + + SLE+ E ++ E+ D I +
Sbjct: 186 YLSENGNSNNGLSEHAKMEHSSTNSIDEAEITSE-DSSLEDDE----DMSEDPDEILEDE 240
Query: 301 DISSTSN 307
+ S SN
Sbjct: 241 HMWSKSN 247
>gi|115440033|ref|NP_001044296.1| Os01g0757700 [Oryza sativa Japonica Group]
gi|113533827|dbj|BAF06210.1| Os01g0757700 [Oryza sativa Japonica Group]
gi|215734974|dbj|BAG95696.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 213
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/183 (67%), Positives = 146/183 (79%), Gaps = 2/183 (1%)
Query: 1 MLSLSYSLPPFTKIFEPIKISRNAR--SLVVCAARGPRPRYPRVWKARKRIGTISKSAKL 58
M S+ P F E I+ ++ +LVVC ARGPRPRYPRVWK RKRIGT+SKS KL
Sbjct: 1 MFSVRCGPPAFAFGLERAAITHPSKFSTLVVCGARGPRPRYPRVWKTRKRIGTVSKSQKL 60
Query: 59 VTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKG 118
V C+KGLSNVKEEVYGALDSF+AWELEFPLI VKKALKTLE+EK+WKRIIQV KWM +KG
Sbjct: 61 VECVKGLSNVKEEVYGALDSFVAWELEFPLIAVKKALKTLEDEKEWKRIIQVIKWMFNKG 120
Query: 119 QGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKM 178
QG+TMG+Y+ LLNAL EDGR++EAEEL+ KIF +LEG P FF +MIS+YY ++KM
Sbjct: 121 QGKTMGSYYTLLNALIEDGRVEEAEELYGKIFSRYLEGLPHTFFMRMISLYYRLESYQKM 180
Query: 179 FEI 181
FE+
Sbjct: 181 FEV 183
>gi|414880432|tpg|DAA57563.1| TPA: hypothetical protein ZEAMMB73_276663 [Zea mays]
Length = 193
Score = 253 bits (646), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 120/177 (67%), Positives = 143/177 (80%), Gaps = 1/177 (0%)
Query: 5 SYSLPPFTKIFE-PIKISRNARSLVVCAARGPRPRYPRVWKARKRIGTISKSAKLVTCIK 63
+Y P F + E P++ +VVC ARGPRPRYPRVWK RK+IGTISKS KLV CIK
Sbjct: 6 NYWSPAFASVKEGPVRHHIKFNCVVVCGARGPRPRYPRVWKTRKKIGTISKSQKLVECIK 65
Query: 64 GLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTM 123
GLSNVKEEVYGALDSF+AWELEFPLI VKKALK LE+EK+WKRIIQV KWM +KGQG+TM
Sbjct: 66 GLSNVKEEVYGALDSFVAWELEFPLIVVKKALKKLEDEKEWKRIIQVIKWMFNKGQGKTM 125
Query: 124 GTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
G+Y+ LLNAL EDGR++EAEEL+ +F ++EG PR FF ++IS YY+ G H+KMFE
Sbjct: 126 GSYYTLLNALIEDGRIEEAEELFRMVFSRYMEGLPRTFFMRIISFYYSAGEHDKMFE 182
>gi|302802253|ref|XP_002982882.1| hypothetical protein SELMODRAFT_117025 [Selaginella moellendorffii]
gi|300149472|gb|EFJ16127.1| hypothetical protein SELMODRAFT_117025 [Selaginella moellendorffii]
Length = 296
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 152/212 (71%)
Query: 40 PRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE 99
P+ WK + G+ K+ L+ C+ LS+ KE++YGALD++ A+E++FP+ VKKAL+ L
Sbjct: 1 PKTWKKTAKRGSSLKAVNLIKCVTNLSDCKEDIYGALDAWSAFEVDFPIEPVKKALRILR 60
Query: 100 NEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR 159
++ WKR+IQV+KWMLSKG G+TM TY LL+ AL ++ R++EAEE++ +F +L+ PR
Sbjct: 61 DQWQWKRVIQVSKWMLSKGHGKTMATYQLLIVALEKEDRIEEAEEVFHGVFRRYLDALPR 120
Query: 160 IFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
F M+ IY GM+EK+ ++FADMEEL VRP+ +V M+ + K+GM +K EK+++K
Sbjct: 121 SHFSLMMGIYNRAGMYEKLLDLFADMEELNVRPDQGLVEMVAEVYFKVGMPEKSEKVREK 180
Query: 220 YPPPKWEYRYIKGKRVRIPAKPKYELDSATEG 251
YP ++EYRY+KG+R+R+P K Y+ +S G
Sbjct: 181 YPLRRYEYRYLKGRRIRVPTKRLYQAESGGGG 212
>gi|413952395|gb|AFW85044.1| hypothetical protein ZEAMMB73_708833 [Zea mays]
Length = 287
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 129/272 (47%), Positives = 171/272 (62%), Gaps = 51/272 (18%)
Query: 17 PIKISRNARSLVVCAARGPRPRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGAL 76
P++ S+VVC ARGPRPRYPRVWK RK+IGTISKS
Sbjct: 19 PVRHHIKFNSVVVCGARGPRPRYPRVWKTRKKIGTISKSQ-------------------- 58
Query: 77 DSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAED 136
K +E V KWM +KGQG+TMG+Y+ LLNAL ED
Sbjct: 59 -------------------KLVEC---------VIKWMFNKGQGKTMGSYYTLLNALIED 90
Query: 137 GRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSI 196
GR++EAEEL+ +F ++EG PR FF +MIS YY+ ++KMFEIFADMEELGVRP+ SI
Sbjct: 91 GRIEEAEELFGMVFSRYMEGLPRTFFMRMISFYYSVEAYDKMFEIFADMEELGVRPDGSI 150
Query: 197 VSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSATEG--KTN 254
+ M+G+ FQKL M+DKYEKLKKKYPPPKW+YR+IKGKR+RI P + A +G T+
Sbjct: 151 IRMLGDVFQKLEMMDKYEKLKKKYPPPKWDYRHIKGKRIRIRVYPDSNPEVAAKGDPDTD 210
Query: 255 EVETTKNPNESSEEPEAAAN-LNESLEETEAN 285
E+E ++ + ++E EAA++ L+ S+ + A+
Sbjct: 211 ELEELESTHLNNELDEAASSGLDRSVLDDAAS 242
>gi|302818634|ref|XP_002990990.1| hypothetical protein SELMODRAFT_47850 [Selaginella moellendorffii]
gi|300141321|gb|EFJ08034.1| hypothetical protein SELMODRAFT_47850 [Selaginella moellendorffii]
Length = 195
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 94/195 (48%), Positives = 143/195 (73%)
Query: 43 WKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEK 102
WK + G+ K+ L+ CI LS+ KE++YGALD++ A+E++FP+ VKKAL+ L ++
Sbjct: 1 WKKTAKRGSSLKAVNLIKCIANLSDCKEDIYGALDAWSAFEVDFPIEPVKKALRILRDQW 60
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFF 162
WKR+IQV+KWMLSKG G+TM TY LL+ AL ++ R++EAEE++ +F +L+ PR F
Sbjct: 61 QWKRVIQVSKWMLSKGHGKTMATYQLLIVALEKEDRIEEAEEVFHGVFRRYLDALPRSHF 120
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPP 222
M+ IY GM+EK+ ++FADMEEL VRP+ +V M+ + K+GM +K EK+++KYP
Sbjct: 121 SLMMGIYNRAGMYEKLLDLFADMEELNVRPDQGLVEMVAEVYFKVGMPEKSEKVREKYPL 180
Query: 223 PKWEYRYIKGKRVRI 237
++EYRY+KG+R+R+
Sbjct: 181 RRYEYRYLKGRRIRV 195
>gi|168057514|ref|XP_001780759.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667777|gb|EDQ54398.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 204
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 139/202 (68%)
Query: 36 RPRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKAL 95
RPR R WK R G+ +K+ KLV I KE++YGALD+F+AWELEFP+I +KKA+
Sbjct: 2 RPRRKRAWKTTNRKGSFAKARKLVDLIDETPPAKEDIYGALDAFVAWELEFPIIAIKKAM 61
Query: 96 KTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLE 155
+ E+ W++IIQV+KWMLSKGQG+TMGT+ LLL AL +GR++EA+ L+ K+ +H +
Sbjct: 62 AFMAEEQKWRQIIQVSKWMLSKGQGKTMGTFTLLLEALDHEGRVEEADALFEKLLTEHED 121
Query: 156 GTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEK 215
TPR F +I+++ ++ ++FADMEEL ++P++ V + ++ +G++ + E
Sbjct: 122 ATPRYMFTVVIAMFERHNNPRRLLQVFADMEELEIKPDMVTVERVARTYRSIGLMKRAEA 181
Query: 216 LKKKYPPPKWEYRYIKGKRVRI 237
++ KYPP KW +RY +GK R+
Sbjct: 182 VEAKYPPTKWGFRYKRGKAYRV 203
>gi|297740592|emb|CBI30774.3| unnamed protein product [Vitis vinifera]
Length = 277
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 98/196 (50%), Positives = 123/196 (62%), Gaps = 1/196 (0%)
Query: 42 VWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENE 101
+W+ R IG+ K+ LV + L N KE VYGALD + AWE EFPLI KAL+ L
Sbjct: 74 LWRKRDSIGSGQKALNLVRIVSELPNEKEAVYGALDKWTAWETEFPLIAAAKALRILRKR 133
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161
WKR+IQV KWMLSKGQG TMGTY LL A D R+DEAE LW I H +
Sbjct: 134 NQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDWRVDEAESLWNMILHTHTRSISKQL 193
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYP 221
F +MIS+Y + M +K+ E+FADMEELGV+P+ V + AFQ LG DK + + KKY
Sbjct: 194 FSRMISLYDHHDMRDKVIEVFADMEELGVKPDEDTVRRVACAFQTLGQEDKQKLVLKKY- 252
Query: 222 PPKWEYRYIKGKRVRI 237
KW+Y + G+RVR+
Sbjct: 253 QCKWKYIHFNGERVRV 268
>gi|449513186|ref|XP_004164255.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Cucumis sativus]
Length = 270
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/197 (48%), Positives = 122/197 (61%), Gaps = 1/197 (0%)
Query: 41 RVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN 100
+WK R G+ K+ LV + N KE VYG L+ +IAWE EFPLI KAL+ L
Sbjct: 65 HLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRK 124
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
WKR+IQV KWMLSKGQG TMGTY LL A D R+DEAE LW I H +
Sbjct: 125 RSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKR 184
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
F +MIS+Y + + +K+ EIFADMEELGV+P+ V + AFQKLG D + + K+Y
Sbjct: 185 VFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVCRAFQKLGQEDNRKMVYKRY 244
Query: 221 PPPKWEYRYIKGKRVRI 237
+W+Y + KG+RVR+
Sbjct: 245 -SCQWKYIHFKGERVRV 260
>gi|224114395|ref|XP_002316747.1| predicted protein [Populus trichocarpa]
gi|222859812|gb|EEE97359.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 125/196 (63%), Gaps = 1/196 (0%)
Query: 42 VWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENE 101
+W+ R G+ K+ LV + L N KE VYGALD + AWE EFPLI KALK L+
Sbjct: 70 LWQKRDSAGSGQKALNLVRIVSELPNEKEAVYGALDKWTAWETEFPLIAAAKALKILQQR 129
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161
+ W R+IQV KWMLSKGQG T+GTY LL A +D R+DEA+ LW I H +
Sbjct: 130 RQWTRVIQVAKWMLSKGQGATLGTYDTLLLAFDKDDRVDEAKSLWNMIIHVHTRSMSKRL 189
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYP 221
F +MIS+Y + M +++ E+FADMEELGVRP+ V + AF+KLG +K E + ++Y
Sbjct: 190 FSRMISLYDHHNMQDEIIEVFADMEELGVRPDEDTVWRVARAFKKLGQEEKRELVLERY- 248
Query: 222 PPKWEYRYIKGKRVRI 237
KW+Y + G+RVR+
Sbjct: 249 LCKWKYIHFNGERVRV 264
>gi|297800166|ref|XP_002867967.1| hypothetical protein ARALYDRAFT_914772 [Arabidopsis lyrata subsp.
lyrata]
gi|297313803|gb|EFH44226.1| hypothetical protein ARALYDRAFT_914772 [Arabidopsis lyrata subsp.
lyrata]
Length = 284
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 122/196 (62%), Gaps = 1/196 (0%)
Query: 42 VWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENE 101
+WK G+ K+ LV + GL N KE VYGAL+ ++AWE+EFP+I KAL+ L
Sbjct: 82 LWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAAAKALQILRKR 141
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161
W R+IQ+ KWMLSKGQG TMGTY LL A D R DEAE LW I H PR
Sbjct: 142 SQWHRVIQLAKWMLSKGQGATMGTYDTLLLAFDMDQRADEAESLWNMILHTHTRSIPRRL 201
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYP 221
F +MI++Y + +H+K+ E+FADMEEL VRP+ + AF++LG + + + ++Y
Sbjct: 202 FARMIALYAHYDLHDKVIEVFADMEELKVRPDEDTARRVARAFRELGQEENRKLILRRY- 260
Query: 222 PPKWEYRYIKGKRVRI 237
+++Y Y G+RVR+
Sbjct: 261 LSEFKYIYFNGERVRV 276
>gi|255645904|gb|ACU23441.1| unknown [Glycine max]
Length = 288
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 123/197 (62%), Gaps = 1/197 (0%)
Query: 41 RVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN 100
+WK+R + K+ LV + L N KE VYGALD + AWE EFP+I V KALK L
Sbjct: 81 HLWKSRDSAQSGQKALALVRTVYKLPNEKEAVYGALDKWTAWETEFPVIAVSKALKILRK 140
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
W R+IQV KWMLSKGQG TMGTY LL A D R+DEAE LW I HL +
Sbjct: 141 RGHWVRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMIIHAHLRSVSKR 200
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
F +MIS+Y + M +K+ ++FADMEEL ++P+ V + AF++LG +K + + K+Y
Sbjct: 201 LFSRMISLYDHHNMPDKIIDVFADMEELRLKPDEDTVRRVARAFRELGDEEKRKLVIKQY 260
Query: 221 PPPKWEYRYIKGKRVRI 237
KW+Y + G+RVR+
Sbjct: 261 -GLKWKYIHFNGERVRV 276
>gi|356555478|ref|XP_003546058.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Glycine max]
Length = 288
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 123/197 (62%), Gaps = 1/197 (0%)
Query: 41 RVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN 100
+WK+R + K+ LV + L N KE VYGALD + AWE EFP+I V KALK L
Sbjct: 81 HLWKSRDSAQSGQKALALVRTVYKLPNEKEAVYGALDKWTAWETEFPVIAVSKALKILRK 140
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
W R+IQV KWMLSKGQG TMGTY LL A D R+DEAE LW I H+ +
Sbjct: 141 RGHWVRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMIIHAHMRSVSKR 200
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
F +MIS+Y + M +K+ ++FADMEEL ++P+ V + AF++LG +K + + K+Y
Sbjct: 201 LFSRMISLYDHHNMPDKIIDVFADMEELRLKPDEDTVRRVARAFRELGDEEKRKLVIKQY 260
Query: 221 PPPKWEYRYIKGKRVRI 237
KW+Y + G+RVR+
Sbjct: 261 -GLKWKYIHFNGERVRV 276
>gi|18415213|ref|NP_567571.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|186512032|ref|NP_001119009.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186688|ref|NP_001190768.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635632|sp|Q2V3H0.2|PP322_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18975, chloroplastic; Flags: Precursor
gi|332658715|gb|AEE84115.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658717|gb|AEE84117.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658718|gb|AEE84118.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 287
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 121/197 (61%), Gaps = 1/197 (0%)
Query: 41 RVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN 100
+WK G+ K+ LV + GL N KE VYGAL+ ++AWE+EFP+I KAL+ L
Sbjct: 84 HLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAAAKALQILRK 143
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
W R+IQ+ KWMLSKGQG TMGTY +LL A D R DEAE LW I H PR
Sbjct: 144 RSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLWNMILHTHTRSIPRR 203
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
F +MI++Y + +H+K+ E+FADMEEL V P+ + AF++L + + + ++Y
Sbjct: 204 LFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFRELNQEENRKLILRRY 263
Query: 221 PPPKWEYRYIKGKRVRI 237
+++Y Y G+RVR+
Sbjct: 264 -LSEYKYIYFNGERVRV 279
>gi|79325165|ref|NP_001031667.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658716|gb|AEE84116.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 260
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 121/196 (61%), Gaps = 1/196 (0%)
Query: 42 VWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENE 101
+WK G+ K+ LV + GL N KE VYGAL+ ++AWE+EFP+I KAL+ L
Sbjct: 58 LWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAAAKALQILRKR 117
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161
W R+IQ+ KWMLSKGQG TMGTY +LL A D R DEAE LW I H PR
Sbjct: 118 SQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLWNMILHTHTRSIPRRL 177
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYP 221
F +MI++Y + +H+K+ E+FADMEEL V P+ + AF++L + + + ++Y
Sbjct: 178 FARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFRELNQEENRKLILRRY- 236
Query: 222 PPKWEYRYIKGKRVRI 237
+++Y Y G+RVR+
Sbjct: 237 LSEYKYIYFNGERVRV 252
>gi|255571955|ref|XP_002526919.1| conserved hypothetical protein [Ricinus communis]
gi|223533738|gb|EEF35472.1| conserved hypothetical protein [Ricinus communis]
Length = 224
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 118/193 (61%), Gaps = 1/193 (0%)
Query: 42 VWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENE 101
+WK R + K+ LV + L + KE VYGALD + AWE EFPLI V K L+ L
Sbjct: 23 LWKKRDSARSGEKALSLVRIVCELPDEKECVYGALDKWTAWETEFPLIAVAKGLRILRKH 82
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161
W R+IQV KWMLSKGQG TMGTY LL A D R+DEA LW I H+ +
Sbjct: 83 NQWLRVIQVAKWMLSKGQGTTMGTYDTLLLAFDMDNRVDEAASLWNMILHTHVRSISKRL 142
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYP 221
F +MIS+Y + M + + EIFADMEELGVRP+ V + AF++LG +K + + K+Y
Sbjct: 143 FSRMISLYDHHNMPDGIIEIFADMEELGVRPDEDTVRRVARAFKELGQEEKQKLVLKRY- 201
Query: 222 PPKWEYRYIKGKR 234
+W+Y + KG+R
Sbjct: 202 MSRWKYIHFKGER 214
>gi|357122518|ref|XP_003562962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Brachypodium distachyon]
Length = 241
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 122/196 (62%), Gaps = 1/196 (0%)
Query: 42 VWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENE 101
+W + G+ K+ +LV + L N KE VYGALD + A+E EFP+I KAL+ L+ +
Sbjct: 40 LWIRKDSAGSGKKALRLVNTVSKLPNGKEAVYGALDRWTAFETEFPIIAAAKALEMLKRQ 99
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161
+ W +IIQVTKW++SKGQ T TY LL AL DGRLDEAE +W + H P+
Sbjct: 100 RQWIQIIQVTKWLMSKGQVLTWTTYDTLLLALFMDGRLDEAESIWNTVIQKHTRSVPKRL 159
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYP 221
F +MI IY +R + +K+ E+FADMEELGV P+ +G AF G DK + + +KY
Sbjct: 160 FSRMILIYDSRRLPDKVLEVFADMEELGVHPDEDTTRRIGRAFASSGQEDKQKPVLEKY- 218
Query: 222 PPKWEYRYIKGKRVRI 237
KW+Y + G+RVR+
Sbjct: 219 LKKWKYIHFNGERVRV 234
>gi|2832625|emb|CAA16754.1| putative protein [Arabidopsis thaliana]
gi|7268691|emb|CAB78899.1| putative protein [Arabidopsis thaliana]
Length = 626
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 115/190 (60%), Gaps = 3/190 (1%)
Query: 41 RVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN 100
+WK G+ K+ LV + GL N KE VYGAL+ ++AWE+EFP+I KAL+ L
Sbjct: 57 HLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAAAKALQILRK 116
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
W R+IQ+ KWMLSKGQG TMGTY +LL A D R DEAE LW I H PR
Sbjct: 117 RSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLWNMILHTHTRSIPRR 176
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
F +MI++Y + +H+K+ E+FADMEEL V P+ + AF++L + + + ++Y
Sbjct: 177 LFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFRELNQEENRKLILRRY 236
Query: 221 PPPKWEYRYI 230
EY+YI
Sbjct: 237 LS---EYKYI 243
>gi|356549156|ref|XP_003542963.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g18975, chloroplastic-like [Glycine max]
Length = 289
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 119/197 (60%), Gaps = 1/197 (0%)
Query: 41 RVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN 100
+WK+R + K+ LV + L N KE VYGALD + AWE EFP+I V KALK L
Sbjct: 82 HLWKSRDSAQSGQKALALVRTVYKLPNEKEAVYGALDKWTAWETEFPVIAVSKALKILRK 141
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
W R IQV KWM+SKGQG TMGTY LL A D R+D AE W I H+ +
Sbjct: 142 RGHWVRAIQVAKWMISKGQGATMGTYDTLLLAFDMDKRVDVAESSWNMIIHAHIRSVSKR 201
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
F +MIS+ + M +K+ E+FADMEEL V+P+ V + AF++LG +K++ + K+Y
Sbjct: 202 LFSRMISLXDHHNMLDKIIEVFADMEELRVKPDEDTVRRVARAFRELGEEEKWKLVIKRY 261
Query: 221 PPPKWEYRYIKGKRVRI 237
KW+Y + G+RV +
Sbjct: 262 -GLKWKYIHFNGERVXV 277
>gi|326493972|dbj|BAJ85448.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511571|dbj|BAJ91930.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517433|dbj|BAK00083.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531618|dbj|BAJ97813.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 251
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 121/197 (61%), Gaps = 1/197 (0%)
Query: 41 RVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN 100
R+W + G+ K+ LV + L N KE VYGALD + A+E EFP+I KAL+ L+
Sbjct: 49 RLWIRKDSAGSGKKALCLVNTVSKLPNEKEAVYGALDRWTAFEPEFPIIAAAKALEMLKK 108
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
+ W +IIQVTKW++SKGQ T TY LL AL+ DGR+DEAE +W I + P+
Sbjct: 109 RRKWLQIIQVTKWLMSKGQVLTWTTYDTLLLALSMDGRVDEAESIWNTILQTYTRSVPKK 168
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
F +MI IY + +K+ EI+ADMEELGVRP+ +G AF G DK + + +KY
Sbjct: 169 LFSRMIQIYNTCHLPDKVLEIYADMEELGVRPDEDTTRRIGRAFATSGQEDKQKPVLEKY 228
Query: 221 PPPKWEYRYIKGKRVRI 237
KW+Y + G+RVR+
Sbjct: 229 -LKKWKYIHFNGERVRV 244
>gi|449464466|ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
[Cucumis sativus]
Length = 1830
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 96/153 (62%)
Query: 41 RVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN 100
+WK R G+ K+ LV + N KE VYG L+ +IAWE EFPLI KAL+ L
Sbjct: 848 HLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRK 907
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
WKR+IQV KWMLSKGQG TMGTY LL A D R+DEAE LW I H +
Sbjct: 908 RSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKR 967
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPN 193
F +MIS+Y + + +K+ EIFADMEELGV+P+
Sbjct: 968 VFSRMISLYEHHDLQDKIIEIFADMEELGVKPD 1000
>gi|226532337|ref|NP_001149127.1| EMB1417 [Zea mays]
gi|195624936|gb|ACG34298.1| EMB1417 [Zea mays]
gi|219884507|gb|ACL52628.1| unknown [Zea mays]
gi|224031003|gb|ACN34577.1| unknown [Zea mays]
Length = 249
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 118/196 (60%), Gaps = 1/196 (0%)
Query: 42 VWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENE 101
+W ++ G+ K+ +L+ + L N +E +YGALD + A+E EFP+I KAL L+
Sbjct: 48 LWIRKETAGSGKKALRLIDAVSKLPNEREAIYGALDKWSAFEPEFPIIAAAKALGMLKRR 107
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161
+ W RIIQVTKW++SKGQ T TY LL AL D R+DEAE +W + H P+
Sbjct: 108 RQWLRIIQVTKWLMSKGQVLTWTTYDTLLLALLMDKRVDEAESVWNTVIQTHTRSVPKRL 167
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYP 221
F +MI IY +K+ EIFADMEELGVRP+ +G AF G +K + + +KY
Sbjct: 168 FSRMILIYDIHQRPDKVLEIFADMEELGVRPDEDTARRIGKAFVASGQEEKEKHVLEKY- 226
Query: 222 PPKWEYRYIKGKRVRI 237
KW+Y + G+RVR+
Sbjct: 227 LKKWKYIHFNGERVRV 242
>gi|34393638|dbj|BAC83317.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|125600619|gb|EAZ40195.1| hypothetical protein OsJ_24640 [Oryza sativa Japonica Group]
Length = 253
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 117/197 (59%), Gaps = 2/197 (1%)
Query: 42 VWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENE 101
+W + G+ K+ LV + L N KE VYGALD + A+E EFP I KAL+ L+
Sbjct: 51 LWIRKDSAGSGKKALHLVNTVSKLPNEKEAVYGALDKWTAFEPEFPTIAAAKALEMLKRR 110
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161
+ W RIIQV KW++SKGQ T TY LL AL DGR+DEAE +W I H P+
Sbjct: 111 RQWLRIIQVAKWLMSKGQVLTWTTYDTLLLALFMDGRIDEAESIWNNIIQTHTRSVPKRL 170
Query: 162 FDKMISIYYNRGMHEKMFE-IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
F +MI IY R +K+ E I+ADMEELGV P+ +G AF LG DK + + +KY
Sbjct: 171 FSRMILIYDTRHCPDKVLEVIYADMEELGVHPDEDTTRRIGRAFVTLGQEDKEKIVLEKY 230
Query: 221 PPPKWEYRYIKGKRVRI 237
K++Y + G+RVR+
Sbjct: 231 -LKKYKYMHFNGERVRV 246
>gi|125558705|gb|EAZ04241.1| hypothetical protein OsI_26386 [Oryza sativa Indica Group]
Length = 253
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 117/197 (59%), Gaps = 2/197 (1%)
Query: 42 VWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENE 101
+W + G+ K+ LV + L N KE VYGALD + A+E EFP I KAL+ L+
Sbjct: 51 LWIRKDSAGSGKKALHLVNTVSKLPNEKEAVYGALDKWTAFEPEFPTIAAAKALEMLKRR 110
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161
+ W RIIQV KW++SKGQ T TY LL AL DGR+DEAE +W I H P+
Sbjct: 111 RQWLRIIQVAKWLMSKGQVLTWTTYDTLLLALFMDGRIDEAESIWNNIIQTHTRSVPKRL 170
Query: 162 FDKMISIYYNRGMHEKMFE-IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
F +MI IY R +K+ E I+ADMEELGV P+ +G AF LG DK + + +KY
Sbjct: 171 FSRMILIYDTRHCPDKVLEVIYADMEELGVHPDEDTTRRIGRAFVTLGQEDKGKIVLEKY 230
Query: 221 PPPKWEYRYIKGKRVRI 237
K++Y + G+RVR+
Sbjct: 231 -LKKYKYVHFNGERVRV 246
>gi|242045910|ref|XP_002460826.1| hypothetical protein SORBIDRAFT_02g035690 [Sorghum bicolor]
gi|241924203|gb|EER97347.1| hypothetical protein SORBIDRAFT_02g035690 [Sorghum bicolor]
Length = 249
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 131/229 (57%), Gaps = 3/229 (1%)
Query: 9 PPFTKIFEPIKISRNARSLVVCAARGPRPRYPRVWKARKRIGTISKSAKLVTCIKGLSNV 68
PP SR+A S + + + + ++ +W ++ G+ K+ +L+ + L N
Sbjct: 17 PPGRGKGGGGGASRDAGSRALVSKKPNKQQH--LWIRKETAGSGKKALRLIDAVSKLPNE 74
Query: 69 KEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFL 128
+E +YGALD + A+E EFP+I KAL L+ + W RIIQVTKW++SKGQ T TY
Sbjct: 75 REAIYGALDKWSAFEPEFPIIAAAKALGMLKRRQKWLRIIQVTKWLMSKGQVLTWTTYDT 134
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
L+ AL D R+DEAE +W + H+ P+ F +MI +Y +K+ EI+ DMEEL
Sbjct: 135 LMLALFMDKRVDEAESIWNTVIQTHMRSVPKRLFSRMILMYDIHQRPDKVLEIYTDMEEL 194
Query: 189 GVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRI 237
GVRP+ +G AF G ++ + + +KY KW+Y + G+RVR+
Sbjct: 195 GVRPDEDTARRIGKAFVAFGQEEEEKHVLEKY-LKKWKYIHFNGERVRV 242
>gi|194699890|gb|ACF84029.1| unknown [Zea mays]
Length = 258
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 119/205 (58%), Gaps = 10/205 (4%)
Query: 42 VWKARKRIGTISKSAKLVTCIK---------GLSNVKEEVYGALDSFIAWELEFPLITVK 92
+W ++ G+ K+ +L+ ++ L N +E +YGALD + A+E EFP+I
Sbjct: 48 LWIRKETAGSGKKALRLIDAVRYTLAIDTVSKLPNEREAIYGALDKWSAFEPEFPIIAAA 107
Query: 93 KALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD 152
KAL L+ + W RIIQVTKW++SKGQ T TY LL AL D R+DEAE +W +
Sbjct: 108 KALGMLKRRRQWLRIIQVTKWLMSKGQVLTWTTYDTLLLALLMDKRVDEAESVWNTVIQT 167
Query: 153 HLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
H P+ F +MI IY +K+ EIFADMEELGVRP+ +G AF G +K
Sbjct: 168 HTRSVPKRLFSRMILIYDIHQRPDKVLEIFADMEELGVRPDEDTARRIGKAFVASGQEEK 227
Query: 213 YEKLKKKYPPPKWEYRYIKGKRVRI 237
+ + +KY KW+Y + G+RVR+
Sbjct: 228 EKHVLEKY-LKKWKYIHFNGERVRV 251
>gi|414887055|tpg|DAA63069.1| TPA: EMB1417 [Zea mays]
Length = 192
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 108/176 (61%), Gaps = 1/176 (0%)
Query: 62 IKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGR 121
+ L N +E +YGALD + A+E EFP+I KAL L+ + W RIIQVTKW++SKGQ
Sbjct: 11 VSKLPNEREAIYGALDKWSAFEPEFPIIAAAKALGMLKRRRQWLRIIQVTKWLMSKGQVL 70
Query: 122 TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEI 181
T TY LL AL D R+DEAE +W + H P+ F +MI IY +K+ EI
Sbjct: 71 TWTTYDTLLLALLMDKRVDEAESVWNTVIQTHTRSVPKRLFSRMILIYDIHQRPDKVLEI 130
Query: 182 FADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRI 237
FADMEELGVRP+ V +G AF G +K + + +KY KW+Y + G+RVR+
Sbjct: 131 FADMEELGVRPDKDTVRRIGKAFVASGQEEKEKHVLEKY-LKKWKYIHFNGERVRV 185
>gi|302790525|ref|XP_002977030.1| hypothetical protein SELMODRAFT_443396 [Selaginella moellendorffii]
gi|300155508|gb|EFJ22140.1| hypothetical protein SELMODRAFT_443396 [Selaginella moellendorffii]
Length = 367
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 114/189 (60%), Gaps = 4/189 (2%)
Query: 52 ISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVT 111
+ ++ LV + L +VKEE++ A D++IAWEL FPL T+K A L K W+R+I V
Sbjct: 73 MQRARDLVDAVLPLPDVKEEIWAACDTWIAWELRFPLHTIKMATHRLFRLKQWRRVIHVI 132
Query: 112 KWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYN 171
KWM SKG G TM TY LL AL DGR+DE E +W + E PR+ + +MI++Y
Sbjct: 133 KWMFSKGHGFTMNTYGCLLRALDIDGRVDEVEHIWHTFVVTKQESVPRVMYARMITMYDR 192
Query: 172 RGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPK----WEY 227
R + +K ++F ++E G RP+ + + +G ++KLG +K +L +K+ P K +++
Sbjct: 193 RALPDKAIKMFKELELSGTRPDPATIIRIGKIYEKLGFTNKTAELLEKHKPTKRFISFKF 252
Query: 228 RYIKGKRVR 236
R+ G+ V
Sbjct: 253 RWSTGEVVH 261
>gi|226712502|gb|ACO76260.1| At4g18975-like protein [Capsella grandiflora]
gi|226712504|gb|ACO76261.1| At4g18975-like protein [Capsella grandiflora]
gi|226712510|gb|ACO76264.1| At4g18975-like protein [Capsella grandiflora]
gi|226712512|gb|ACO76265.1| At4g18975-like protein [Capsella grandiflora]
gi|226712514|gb|ACO76266.1| At4g18975-like protein [Capsella grandiflora]
gi|226712516|gb|ACO76267.1| At4g18975-like protein [Capsella grandiflora]
gi|226712518|gb|ACO76268.1| At4g18975-like protein [Capsella grandiflora]
Length = 152
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 87/140 (62%)
Query: 41 RVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN 100
+WK G+ K+ LV + GLSN KE VYGALD ++AWE+EFP+I KAL+ L
Sbjct: 13 HLWKKNDSAGSGQKALNLVRMLSGLSNEKEAVYGALDKWVAWEVEFPIIAAAKALQILRK 72
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
W R+IQV KWMLSKGQG TMGTY LL A D R DEAE LW I H PR
Sbjct: 73 RSQWHRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDERADEAESLWNMILHTHTRSIPRR 132
Query: 161 FFDKMISIYYNRGMHEKMFE 180
F +MI++Y + +H+K+ E
Sbjct: 133 LFARMIALYSHHDLHDKVIE 152
>gi|302797721|ref|XP_002980621.1| hypothetical protein SELMODRAFT_420308 [Selaginella moellendorffii]
gi|300151627|gb|EFJ18272.1| hypothetical protein SELMODRAFT_420308 [Selaginella moellendorffii]
Length = 314
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 120/209 (57%), Gaps = 4/209 (1%)
Query: 52 ISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVT 111
+ ++ LV + L +VK E++ A D++IAWEL FPL T++ A L K W+R+I V
Sbjct: 95 MQRARDLVDAVLPLPDVKGEIWAACDTWIAWELRFPLHTIEMATHRLFRLKQWRRVIHVI 154
Query: 112 KWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYN 171
KWM SKG G TM TY LL AL DGR+DE E +W + E PR+ + +MI+ Y
Sbjct: 155 KWMFSKGHGFTMNTYGCLLRALDIDGRVDEVEHIWHTFVVTKQESVPRVMYARMITTYDR 214
Query: 172 RGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPK----WEY 227
R + +K ++F ++E G RP+ + + +G ++KLG +K +L +K+ P K +++
Sbjct: 215 RALPDKAIKMFKELELSGTRPDPATIIKIGKIYEKLGFTNKTAELLEKHKPTKTFISFKF 274
Query: 228 RYIKGKRVRIPAKPKYELDSATEGKTNEV 256
R K + +P + L S+ + K ++
Sbjct: 275 RTKSHKFMGVPGHDRRRLTSSEKQKKRKL 303
>gi|226712452|gb|ACO76235.1| At4g18975-like protein [Capsella rubella]
gi|226712454|gb|ACO76236.1| At4g18975-like protein [Capsella rubella]
gi|226712456|gb|ACO76237.1| At4g18975-like protein [Capsella rubella]
gi|226712458|gb|ACO76238.1| At4g18975-like protein [Capsella rubella]
gi|226712460|gb|ACO76239.1| At4g18975-like protein [Capsella rubella]
gi|226712462|gb|ACO76240.1| At4g18975-like protein [Capsella rubella]
gi|226712464|gb|ACO76241.1| At4g18975-like protein [Capsella rubella]
gi|226712466|gb|ACO76242.1| At4g18975-like protein [Capsella rubella]
gi|226712468|gb|ACO76243.1| At4g18975-like protein [Capsella rubella]
gi|226712470|gb|ACO76244.1| At4g18975-like protein [Capsella rubella]
gi|226712472|gb|ACO76245.1| At4g18975-like protein [Capsella rubella]
gi|226712474|gb|ACO76246.1| At4g18975-like protein [Capsella rubella]
gi|226712476|gb|ACO76247.1| At4g18975-like protein [Capsella rubella]
gi|226712478|gb|ACO76248.1| At4g18975-like protein [Capsella rubella]
gi|226712480|gb|ACO76249.1| At4g18975-like protein [Capsella rubella]
gi|226712482|gb|ACO76250.1| At4g18975-like protein [Capsella rubella]
gi|226712484|gb|ACO76251.1| At4g18975-like protein [Capsella rubella]
gi|226712486|gb|ACO76252.1| At4g18975-like protein [Capsella rubella]
gi|226712488|gb|ACO76253.1| At4g18975-like protein [Capsella rubella]
gi|226712490|gb|ACO76254.1| At4g18975-like protein [Capsella rubella]
gi|226712492|gb|ACO76255.1| At4g18975-like protein [Capsella rubella]
gi|226712494|gb|ACO76256.1| At4g18975-like protein [Capsella rubella]
gi|226712496|gb|ACO76257.1| At4g18975-like protein [Capsella rubella]
gi|226712498|gb|ACO76258.1| At4g18975-like protein [Capsella rubella]
gi|226712500|gb|ACO76259.1| At4g18975-like protein [Capsella rubella]
Length = 152
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 87/140 (62%)
Query: 41 RVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN 100
+WK G+ K+ LV + GLSN KE VYGALD ++AWE+EFP+I KAL+ L
Sbjct: 13 HLWKKNDSAGSGQKALNLVRMLSGLSNEKEAVYGALDKWVAWEVEFPIIAAAKALQILRK 72
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
W R+IQV KWMLSKGQG TMGTY LL A D R DEAE LW I H PR
Sbjct: 73 RSQWHRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDERADEAESLWNMILNTHTRSIPRR 132
Query: 161 FFDKMISIYYNRGMHEKMFE 180
F +MI++Y + +H+K+ E
Sbjct: 133 LFARMIALYSHHDLHDKVIE 152
>gi|296089642|emb|CBI39461.3| unnamed protein product [Vitis vinifera]
Length = 296
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 103/164 (62%), Gaps = 1/164 (0%)
Query: 58 LVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSK 117
LVT + L + KE VYGALD+++AWE FP+ ++K+ L TLE E+ W R+IQV KWMLSK
Sbjct: 87 LVTTLLDLKDSKEAVYGALDAWVAWEQNFPIASLKRVLITLEKEQQWHRVIQVVKWMLSK 146
Query: 118 GQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEK 177
GQG TMGTY L+ AL D R +EA E W K L P +MIS+YY M E
Sbjct: 147 GQGTTMGTYGQLIRALDMDHRAEEAHEFWVKKIGTDLHSVPWHLCHRMISVYYRNNMLEN 206
Query: 178 MFEIFADMEELGVRPNVS-IVSMMGNAFQKLGMLDKYEKLKKKY 220
+ ++F +E +P +V + +A++ LG+L++ E++ +KY
Sbjct: 207 LVKLFKGLEAFDRKPQDKLVVKKVADAYEMLGLLEEKERIFEKY 250
>gi|225433730|ref|XP_002269673.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform 1 [Vitis vinifera]
Length = 300
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 103/164 (62%), Gaps = 1/164 (0%)
Query: 58 LVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSK 117
LVT + L + KE VYGALD+++AWE FP+ ++K+ L TLE E+ W R+IQV KWMLSK
Sbjct: 91 LVTTLLDLKDSKEAVYGALDAWVAWEQNFPIASLKRVLITLEKEQQWHRVIQVVKWMLSK 150
Query: 118 GQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEK 177
GQG TMGTY L+ AL D R +EA E W K L P +MIS+YY M E
Sbjct: 151 GQGTTMGTYGQLIRALDMDHRAEEAHEFWVKKIGTDLHSVPWHLCHRMISVYYRNNMLEN 210
Query: 178 MFEIFADMEELGVRPNVS-IVSMMGNAFQKLGMLDKYEKLKKKY 220
+ ++F +E +P +V + +A++ LG+L++ E++ +KY
Sbjct: 211 LVKLFKGLEAFDRKPQDKLVVKKVADAYEMLGLLEEKERIFEKY 254
>gi|226712506|gb|ACO76262.1| At4g18975-like protein [Capsella grandiflora]
gi|226712508|gb|ACO76263.1| At4g18975-like protein [Capsella grandiflora]
Length = 152
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/140 (49%), Positives = 86/140 (61%)
Query: 41 RVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN 100
+WK G+ K+ LV + GLSN KE VYGALD ++AWE+EFP+I KAL+ L
Sbjct: 13 HLWKKNDSAGSGQKALNLVRMLSGLSNEKEAVYGALDKWVAWEVEFPIIAAAKALQILRK 72
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
W R+IQV KWMLSKGQG TMGTY LL A D R EAE LW I H PR
Sbjct: 73 RSQWHRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDERAYEAESLWNMILHTHTRSIPRR 132
Query: 161 FFDKMISIYYNRGMHEKMFE 180
F +MI++Y + +H+K+ E
Sbjct: 133 LFARMIALYSHHDLHDKVIE 152
>gi|359483806|ref|XP_002269512.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Vitis vinifera]
Length = 216
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 86/141 (60%)
Query: 41 RVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN 100
+W+ R IG+ K+ LV + L N KE VYGALD + AWE EFPLI KAL+ L
Sbjct: 73 HLWRKRDSIGSGQKALNLVRIVSELPNEKEAVYGALDKWTAWETEFPLIAAAKALRILRK 132
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
WKR+IQV KWMLSKGQG TMGTY LL A D R+DEAE LW I H +
Sbjct: 133 RNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDWRVDEAESLWNMILHTHTRSISKQ 192
Query: 161 FFDKMISIYYNRGMHEKMFEI 181
F +MIS+Y + M +K+ E+
Sbjct: 193 LFSRMISLYDHHDMRDKVIEM 213
>gi|224140311|ref|XP_002323526.1| predicted protein [Populus trichocarpa]
gi|222868156|gb|EEF05287.1| predicted protein [Populus trichocarpa]
Length = 269
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 103/164 (62%), Gaps = 1/164 (0%)
Query: 58 LVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSK 117
+V + L++ K+ VYGALD+++AWE +FP+ ++K+ L LE E+ W RI+QV KWMLSK
Sbjct: 52 VVFTLLDLNDSKDSVYGALDAWVAWEQKFPIASIKQVLIALEKEQQWHRIVQVIKWMLSK 111
Query: 118 GQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEK 177
GQG TMGTY + AL D R EA E W K L P ++MISIYY M E
Sbjct: 112 GQGTTMGTYAQFIRALDMDHRAKEAHEFWLKKIGRDLHSVPWQLCNRMISIYYRNNMLEN 171
Query: 178 MFEIFADMEELGVR-PNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
+ ++F +E + P SIV + ++++ LG+L++ E++ +KY
Sbjct: 172 LIKLFKGLEAFDRQPPEKSIVQKVADSYEMLGLLEEKERVLEKY 215
>gi|255570717|ref|XP_002526313.1| conserved hypothetical protein [Ricinus communis]
gi|223534394|gb|EEF36102.1| conserved hypothetical protein [Ricinus communis]
Length = 300
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 100/154 (64%), Gaps = 3/154 (1%)
Query: 69 KEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFL 128
KE VYGALD+++AWE FP+ ++K+ L LE E+ W +++QV KWMLSKGQG TMGTY
Sbjct: 97 KEAVYGALDAWVAWEHNFPIASLKRVLILLEKEQQWHKVVQVIKWMLSKGQGNTMGTYGQ 156
Query: 129 LLNALAEDGRLDEAEELW-TKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEE 187
L+ AL D R +EA W KI LD L P +MIS+YY M E + ++F +E
Sbjct: 157 LIRALDMDHRANEAHMFWLKKIGLD-LHSVPWQLCHRMISVYYRNNMLESLVKLFKGLEA 215
Query: 188 LGVR-PNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
+ P+ SI+ + +A++ LGML++ E++ +KY
Sbjct: 216 FDRKPPDKSILQKVADAYEMLGMLEEKERVLQKY 249
>gi|18390413|ref|NP_563712.1| uncharacterized protein [Arabidopsis thaliana]
gi|13430646|gb|AAK25945.1|AF360235_1 unknown protein [Arabidopsis thaliana]
gi|14532820|gb|AAK64092.1| unknown protein [Arabidopsis thaliana]
gi|332189597|gb|AEE27718.1| uncharacterized protein [Arabidopsis thaliana]
Length = 381
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 131/245 (53%), Gaps = 15/245 (6%)
Query: 40 PRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE 99
PR + + I K LV + + + KE VYGALD+++AWE FP+ ++K + +LE
Sbjct: 131 PRKHQIGENIPKKDKIKFLVNTLLDIEDNKEAVYGALDAWVAWERNFPIASLKIVIASLE 190
Query: 100 NEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR 159
E W R++QV KW+LSKGQG TMGTY L+ AL D R +EA +W K + L P
Sbjct: 191 KEHQWHRMVQVIKWILSKGQGNTMGTYGQLIRALDMDRRAEEAHVIWRKKVGNDLHSVPW 250
Query: 160 IFFDKMISIYYNRGMHEKMFEIFADMEELGVR-PNVSIVSMMGNAFQKLGMLDKYEKLKK 218
+M+ IY+ M +++ ++F D+E + P+ IV + +A++ LGMLD+ E++
Sbjct: 251 QLCLQMMRIYFRNNMLQELVKLFKDLESYDRKPPDKHIVQTVADAYELLGMLDEKERVVT 310
Query: 219 KYP----------PPKWEYRYIKGKRVRIPAKPKYELDSATEGKTNEVETTKNPN-ESSE 267
KY P R K +RI P+ + A + E++ + N ++ +
Sbjct: 311 KYSHLLLGTPSDDKPSRSSRKKKKPELRI---PEATTEGAVDAAKAEIQEERKENLDNHQ 367
Query: 268 EPEAA 272
E EAA
Sbjct: 368 ESEAA 372
>gi|242082674|ref|XP_002441762.1| hypothetical protein SORBIDRAFT_08g002000 [Sorghum bicolor]
gi|241942455|gb|EES15600.1| hypothetical protein SORBIDRAFT_08g002000 [Sorghum bicolor]
Length = 300
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 108/175 (61%), Gaps = 1/175 (0%)
Query: 47 KRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKR 106
K + + K LV + L + +E VYG LD+++A+E +FPL ++K+AL LE E+ W R
Sbjct: 98 KNLSSAEKRKFLVNTLLSLEDSREAVYGTLDAWVAFEQDFPLASLKQALSVLEKEEQWHR 157
Query: 107 IIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMI 166
I+QV KWMLSKGQG TM TY LL+ AL +D R +EA +W K L P F M+
Sbjct: 158 IVQVVKWMLSKGQGNTMRTYELLVCALEKDNRAEEAHRIWQKKIGHDLHSVPWRFCRLML 217
Query: 167 SIYYNRGMHEKMFEIFADMEELGVR-PNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
+IYY +++ ++F ++E G + P+ I+ + +A++ LG+L++ + L KY
Sbjct: 218 AIYYRNNRLDRLMKLFKELEACGRKPPSKDIIRKVEDAYEMLGLLEEKKVLLDKY 272
>gi|297848694|ref|XP_002892228.1| EMB2748 [Arabidopsis lyrata subsp. lyrata]
gi|297338070|gb|EFH68487.1| EMB2748 [Arabidopsis lyrata subsp. lyrata]
Length = 395
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 116/210 (55%), Gaps = 11/210 (5%)
Query: 40 PRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE 99
PR + + I K LV + + + KE VYGALD+++AWE FP+ ++K+ + LE
Sbjct: 132 PRKHQIGENIPKKDKIKFLVNTLLDMEDNKEAVYGALDAWVAWERNFPIASLKRVIAILE 191
Query: 100 NEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR 159
E W R+IQV KW+LSKGQG TMGTY L+ AL D R +EA +W K + L P
Sbjct: 192 KEHQWHRMIQVIKWILSKGQGNTMGTYGQLIRALDMDRRAEEAHVIWRKKIGNDLHSVPW 251
Query: 160 IFFDKMISIYYNRGMHEKMFEIFADMEELGVR-PNVSIVSMMGNAFQKLGMLDKYEKLKK 218
+M+ IY+ M +++ ++F D+E + P+ IV + + ++ LGM+D+ E++
Sbjct: 252 QLCLQMMRIYFRNNMLQELVKLFKDLESYDRKPPDKHIVQTVADTYELLGMVDEKERVMT 311
Query: 219 KYPP----------PKWEYRYIKGKRVRIP 238
KY P+ R K + +RIP
Sbjct: 312 KYSHLLLGTASDDKPRRSSRKKKKQELRIP 341
>gi|195606960|gb|ACG25310.1| EMB2748 [Zea mays]
Length = 322
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 127/225 (56%), Gaps = 19/225 (8%)
Query: 47 KRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKR 106
K + + K LV + L + +E VYG LD+++A+E +FPL ++K+AL LE E+ W R
Sbjct: 91 KNLSSAEKRKFLVNTLLSLEDSREAVYGTLDAWVAFEQDFPLASLKQALSVLEKEEQWHR 150
Query: 107 IIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMI 166
I+QV KWMLSKGQG TM TY LL AL +D R +EA +W L P F M+
Sbjct: 151 IVQVIKWMLSKGQGNTMRTYELLACALEKDNRAEEAHRIWQNKVGHDLHSVPWRFCRLML 210
Query: 167 SIYYNRGMHEKMFEIFADMEELGVR-PNVSIVSMMGNAFQKLG-------MLDKYEKLKK 218
+IYY +++ ++F ++E G + P+ IV + +A++ LG +LDKY+ L
Sbjct: 211 AIYYRNNRLDRLVKLFKELEACGRKPPSKDIVRKVEDAYETLGLLEDKKVLLDKYKDL-- 268
Query: 219 KYPPPKWEYRYIKGKRVRIPAKPKYELDSATEGKTNE--VETTKN 261
Y P + R KG + + K E D ++G + E +ET++N
Sbjct: 269 -YNKPSRDDRK-KGSKSK-----KIESDKPSDGDSKESKMETSEN 306
>gi|194706984|gb|ACF87576.1| unknown [Zea mays]
gi|413915962|gb|AFW55894.1| EMB2748 [Zea mays]
Length = 322
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 127/225 (56%), Gaps = 19/225 (8%)
Query: 47 KRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKR 106
K + + K LV + L + +E VYG LD+++A+E +FPL ++K+AL LE E+ W R
Sbjct: 91 KNLSSAEKRKFLVNTLLSLEDSREAVYGTLDAWVAFEQDFPLASLKQALSVLEKEEQWHR 150
Query: 107 IIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMI 166
I+QV KWMLSKGQG TM TY LL AL +D R +EA +W L P F M+
Sbjct: 151 IVQVIKWMLSKGQGNTMRTYELLACALEKDNRAEEAHRIWQNKVGHDLHSVPWRFCRLML 210
Query: 167 SIYYNRGMHEKMFEIFADMEELGVR-PNVSIVSMMGNAFQKLG-------MLDKYEKLKK 218
+IYY +++ ++F ++E G + P+ IV + +A++ LG +LDKY+ L
Sbjct: 211 AIYYRNNRLDRLVKLFKELEACGRKPPSKDIVRKVEDAYETLGLLEDKKVLLDKYKDL-- 268
Query: 219 KYPPPKWEYRYIKGKRVRIPAKPKYELDSATEGKTNE--VETTKN 261
Y P + R KG + + K E D ++G + E +ET++N
Sbjct: 269 -YNKPSRDDRK-KGSKSK-----KIESDKPSDGDSKESKMETSEN 306
>gi|224090805|ref|XP_002309089.1| predicted protein [Populus trichocarpa]
gi|222855065|gb|EEE92612.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 98/157 (62%), Gaps = 1/157 (0%)
Query: 65 LSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMG 124
L++ K+ VYGALD+++AWE +FP+ ++K+ L LE E+ W RI+QV KWMLSKGQG TM
Sbjct: 75 LNDSKDAVYGALDAWVAWEQKFPIASIKQVLIALEKEQQWHRIVQVIKWMLSKGQGTTMA 134
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY L+ AL D R EA E W K L P + MI+IYY M E + ++F
Sbjct: 135 TYAQLIRALDMDHRAKEAHEFWLKKIGRDLHSVPWKLCNSMITIYYRNNMLENLIKLFKG 194
Query: 185 MEELGVR-PNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
+E + P SIV + +A++ LG+L++ +L +KY
Sbjct: 195 LEAFDRKPPEKSIVQKVADAYEMLGLLEEKGRLLEKY 231
>gi|414887054|tpg|DAA63068.1| TPA: hypothetical protein ZEAMMB73_902452 [Zea mays]
Length = 225
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 108/209 (51%), Gaps = 34/209 (16%)
Query: 62 IKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGR 121
+ L N +E +YGALD + A+E EFP+I KAL L+ + W RIIQVTKW++SKGQ
Sbjct: 11 VSKLPNEREAIYGALDKWSAFEPEFPIIAAAKALGMLKRRRQWLRIIQVTKWLMSKGQVL 70
Query: 122 TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE- 180
T TY LL AL D R+DEAE +W + H P+ F +MI IY +K+ E
Sbjct: 71 TWTTYDTLLLALLMDKRVDEAESVWNTVIQTHTRSVPKRLFSRMILIYDIHQRPDKVLES 130
Query: 181 --------------------------------IFADMEELGVRPNVSIVSMMGNAFQKLG 208
IFADMEELGVRP+ V +G AF G
Sbjct: 131 CAVQCSRLSSIHVVTVTVTHLVLFMEPNHKRQIFADMEELGVRPDKDTVRRIGKAFVASG 190
Query: 209 MLDKYEKLKKKYPPPKWEYRYIKGKRVRI 237
+K + + +KY KW+Y + G+RVR+
Sbjct: 191 QEEKEKHVLEKY-LKKWKYIHFNGERVRV 218
>gi|363807778|ref|NP_001241921.1| uncharacterized protein LOC100795658 [Glycine max]
gi|255637229|gb|ACU18945.1| unknown [Glycine max]
Length = 300
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 104/168 (61%), Gaps = 1/168 (0%)
Query: 54 KSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKW 113
K+ L T + L++ KE VYGALD+++AWE FP+ ++K L +LE ++ W R++QV KW
Sbjct: 74 KNKYLYTTLLELNDSKEAVYGALDAWVAWEQNFPIASLKTILISLEKDQQWHRVVQVIKW 133
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
MLSKGQG TMGTY L+ AL D R++EA++ W L P MIS+YY
Sbjct: 134 MLSKGQGMTMGTYGQLIRALDMDHRVEEAQKFWEIKIGSDLHSVPWQLCHLMISVYYRNN 193
Query: 174 MHEKMFEIFADMEELGVRP-NVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
M + + ++F +E +P + SI+ + NA++ LG++ + ++ +KY
Sbjct: 194 MLQDLVKLFKGLEAFDRKPRDKSIIQKVANAYEVLGLVKEKVRVLEKY 241
>gi|2494119|gb|AAB80628.1| EST gb|T04104 comes from this gene [Arabidopsis thaliana]
Length = 398
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 122/220 (55%), Gaps = 23/220 (10%)
Query: 69 KEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFL 128
KE VYGALD+++AWE FP+ ++K + +LE E W R++QV KW+LSKGQG TMGTY
Sbjct: 177 KEAVYGALDAWVAWERNFPIASLKIVIASLEKEHQWHRMVQVIKWILSKGQGNTMGTYGQ 236
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
L+ AL D R +EA +W K + L P +M+ IY+ M +++ ++F D+E
Sbjct: 237 LIRALDMDRRAEEAHVIWRKKVGNDLHSVPWQLCLQMMRIYFRNNMLQELVKLFKDLESY 296
Query: 189 GVR-PNVSIVSMMGNAFQKLGMLDKYEKLKKKYPP----------PKWEYRYIKGKRVRI 237
+ P+ IV + +A++ LGMLD+ E++ KY P R K +RI
Sbjct: 297 DRKPPDKHIVQTVADAYELLGMLDEKERVVTKYSHLLLGTPSDDKPSRSSRKKKKPELRI 356
Query: 238 PAKPKYELDSATEGKTN----EVETTKNPN-ESSEEPEAA 272
P ++ TEG + E++ + N ++ +E EAA
Sbjct: 357 P-------EATTEGAVDAAKAEIQEERKENLDNHQESEAA 389
>gi|30678929|ref|NP_849590.1| uncharacterized protein [Arabidopsis thaliana]
gi|332189598|gb|AEE27719.1| uncharacterized protein [Arabidopsis thaliana]
Length = 384
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 133/252 (52%), Gaps = 26/252 (10%)
Query: 40 PRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE 99
PR + + I K LV + + + KE VYGALD+++AWE FP+ ++K + +LE
Sbjct: 131 PRKHQIGENIPKKDKIKFLVNTLLDIEDNKEAVYGALDAWVAWERNFPIASLKIVIASLE 190
Query: 100 NEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR 159
E W R++QV KW+LSKGQG TMGTY L+ AL D R +EA +W K + L P
Sbjct: 191 KEHQWHRMVQVIKWILSKGQGNTMGTYGQLIRALDMDRRAEEAHVIWRKKVGNDLHSVPW 250
Query: 160 IFFDKMISIYYNRGMHE---KMFEIFADMEELGVR-PNVSIVSMMGNAFQKLGMLDKYEK 215
+M+ IY+ M + K+ ++F D+E + P+ IV + +A++ LGMLD+ E+
Sbjct: 251 QLCLQMMRIYFRNNMLQELVKVMKLFKDLESYDRKPPDKHIVQTVADAYELLGMLDEKER 310
Query: 216 LKKKYPP----------PKWEYRYIKGKRVRIPAKPKYELDSATEGKTN----EVETTKN 261
+ KY P R K +RIP ++ TEG + E++ +
Sbjct: 311 VVTKYSHLLLGTPSDDKPSRSSRKKKKPELRIP-------EATTEGAVDAAKAEIQEERK 363
Query: 262 PN-ESSEEPEAA 272
N ++ +E EAA
Sbjct: 364 ENLDNHQESEAA 375
>gi|255549552|ref|XP_002515828.1| conserved hypothetical protein [Ricinus communis]
gi|223545057|gb|EEF46570.1| conserved hypothetical protein [Ricinus communis]
Length = 317
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 99/154 (64%), Gaps = 3/154 (1%)
Query: 69 KEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFL 128
KE VYGA+D+++AWE FP+ ++K+ L LE E+ W R++QV KW++SKGQG TMGTY
Sbjct: 65 KEAVYGAVDAWVAWEHNFPIASLKRVLILLEKEQQWHRVVQVIKWIISKGQGNTMGTYGQ 124
Query: 129 LLNALAEDGRLDEAEELW-TKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEE 187
L+ AL D R +EA W KI LD L P +MIS+YY M E + ++ +E
Sbjct: 125 LIRALDMDHRANEAHMFWLKKIGLD-LHSVPWQLCHRMISVYYRNNMLESLVKLSKGLEA 183
Query: 188 LGVR-PNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
+ P+ SIV + +A++ LGML++ E++ +KY
Sbjct: 184 FDHKPPDKSIVQKVADAYEMLGMLEEKERVLQKY 217
>gi|449438159|ref|XP_004136857.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Cucumis sativus]
Length = 302
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 100/175 (57%), Gaps = 1/175 (0%)
Query: 47 KRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKR 106
K I K LV + L + KE VYGALD+++AWE FP+ ++K L LE E+ W R
Sbjct: 86 KNISRKDKIHFLVNTLLDLRDSKEAVYGALDAWVAWEQVFPIASLKHVLAALEKEQQWHR 145
Query: 107 IIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMI 166
I+QV KWMLSKGQG TM Y L+ AL D R +EA + W L P M+
Sbjct: 146 IVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRGEEAHKFWVMKIGSDLHSVPWQVCRSMM 205
Query: 167 SIYYNRGMHEKMFEIFADMEELGVR-PNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
+IYY E + ++F D+E G + P+ SIV + +A + LG+L++ E++ KY
Sbjct: 206 AIYYRNKRLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKY 260
>gi|357153101|ref|XP_003576338.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Brachypodium distachyon]
Length = 316
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 126/219 (57%), Gaps = 6/219 (2%)
Query: 58 LVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSK 117
L+ + L + KE VY LD+++A+E EFPL ++K+A++ LE E+ W RI+QV KWMLSK
Sbjct: 101 LINTLLDLEDSKEAVYSTLDAWVAFEQEFPLASIKQAIEALEKEEQWHRIVQVIKWMLSK 160
Query: 118 GQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEK 177
GQG T+ TY L+ AL +D R +EA +W K L P F M++IYY ++
Sbjct: 161 GQGNTIRTYEQLVRALEKDNRAEEAHRIWEKKISHDLHSVPWRFCGLMLAIYYRNNKLDR 220
Query: 178 MFEIFADMEELGVR-PNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVR 236
+ ++F ++E G + P+ + + +A++ LG+L++ L KY K Y + G ++
Sbjct: 221 LIKLFHNLEACGRKCPSREYIRKVEDAYEMLGLLEEKTALLDKY---KDLYNKLSGNDIK 277
Query: 237 IPAKP-KYELDSATEGKTNEVETTKN-PNESSEEPEAAA 273
+ K + +A + E+E ++N P S EP A++
Sbjct: 278 KGRQSRKAQKKAADSSEQFEMEISENLPCPSDNEPVASS 316
>gi|357481969|ref|XP_003611270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512605|gb|AES94228.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 301
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 100/166 (60%), Gaps = 3/166 (1%)
Query: 58 LVTCIKGLSNV--KEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWML 115
L+T ++ + + KE +YGALD+++AWE FP+ +++ L LE E+ W RI+QV KWML
Sbjct: 71 LLTTLRDMDDTDSKEAIYGALDAWVAWEQNFPIGSLRNILLCLEKEQQWHRIVQVIKWML 130
Query: 116 SKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMH 175
SKGQG TMGTY L+ AL D R+ EA + W L P MIS+YY M
Sbjct: 131 SKGQGTTMGTYGQLIRALDMDHRVGEAHKFWEMKIGTDLHSVPWQLCHLMISVYYRNNML 190
Query: 176 EKMFEIFADMEELGVRP-NVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
E + +F +E +P + I+ + NA++ LG++++ E++ +KY
Sbjct: 191 EDLVRLFKGLEAFDRKPRDKLIIQKVANAYEMLGLIEEKERVMEKY 236
>gi|221327739|gb|ACM17558.1| expressed protein [Oryza brachyantha]
Length = 383
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 109/175 (62%), Gaps = 1/175 (0%)
Query: 47 KRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKR 106
K + + K LV + L + KE VY L++++A+E EFPL+++K+AL LE E+ W R
Sbjct: 187 KNLSSTEKRKFLVNTLLDLEDSKEVVYSTLNAWVAFEQEFPLVSIKQALVVLEKEEQWHR 246
Query: 107 IIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMI 166
I+QV KWMLSKGQG+T+ TY L+ AL +D R +EA +W L+ P F M+
Sbjct: 247 IVQVIKWMLSKGQGKTIRTYEQLVCALEKDNRAEEAYRIWEDKIAHDLQSVPWRFCRLML 306
Query: 167 SIYYNRGMHEKMFEIFADMEELGVR-PNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
IYY +++ ++F ++E G + P+ IV + +A++ LG++++ ++L +KY
Sbjct: 307 GIYYRNNRLDRLVKLFKNLEACGRKPPSKDIVRKVEDAYEMLGLIEEKKELLEKY 361
>gi|125533224|gb|EAY79772.1| hypothetical protein OsI_34928 [Oryza sativa Indica Group]
Length = 292
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 108/175 (61%), Gaps = 1/175 (0%)
Query: 47 KRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKR 106
K + + K LV + L + KE VY LD+++A+E +FP+ ++K+AL LE E+ W R
Sbjct: 90 KNLSSAEKRKFLVNTLLDLEDSKEGVYSTLDAWVAFEQDFPVASIKQALVALEKEEQWHR 149
Query: 107 IIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMI 166
I+QV KWMLSKGQG+T+ TY L+ AL +D R DEA +W L+ P F M+
Sbjct: 150 IVQVIKWMLSKGQGKTIRTYEQLVCALEKDNRADEACRIWEFKIAHDLQSVPWRFCRLML 209
Query: 167 SIYYNRGMHEKMFEIFADMEELGVR-PNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
IYY +++ ++F ++E G + P+ IV + +A++ LG++++ ++L +KY
Sbjct: 210 GIYYRNNKLDRLVKLFKNLEACGRKPPSKDIVRKVEDAYEMLGLVEEKKELLEKY 264
>gi|115487086|ref|NP_001066030.1| Os12g0123100 [Oryza sativa Japonica Group]
gi|108862116|gb|ABA95695.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648537|dbj|BAF29049.1| Os12g0123100 [Oryza sativa Japonica Group]
gi|215697743|dbj|BAG91737.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218186343|gb|EEC68770.1| hypothetical protein OsI_37301 [Oryza sativa Indica Group]
gi|222616540|gb|EEE52672.1| hypothetical protein OsJ_35053 [Oryza sativa Japonica Group]
Length = 292
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 106/175 (60%), Gaps = 1/175 (0%)
Query: 47 KRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKR 106
K + + K LV + L + KE VY LD+++A+E EFP+ ++K+AL LE E+ W R
Sbjct: 90 KNLSSAEKRKFLVNTLLDLEDSKEGVYSTLDAWVAFEQEFPVASLKQALVALEKEEQWHR 149
Query: 107 IIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMI 166
I+QV KWMLSKGQG+T+ TY L+ AL +D R DEA +W L+ P F M+
Sbjct: 150 IVQVIKWMLSKGQGKTIRTYEQLVCALEKDNRADEACRIWELKIAHDLQSVPWRFCRLML 209
Query: 167 SIYYNRGMHEKMFEIFADMEELGVR-PNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
IYY + + ++F ++E G + P+ IV + + ++ LG++++ ++L +KY
Sbjct: 210 GIYYRNNRLDTLVKLFKNLEACGRKPPSKDIVRKVEDTYEMLGLVEEKKELLEKY 264
>gi|115483917|ref|NP_001065620.1| Os11g0125500 [Oryza sativa Japonica Group]
gi|77548500|gb|ABA91297.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113644324|dbj|BAF27465.1| Os11g0125500 [Oryza sativa Japonica Group]
gi|125576035|gb|EAZ17257.1| hypothetical protein OsJ_32778 [Oryza sativa Japonica Group]
gi|215697284|dbj|BAG91278.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 292
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 107/175 (61%), Gaps = 1/175 (0%)
Query: 47 KRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKR 106
K + + K LV + L + KE VY LD+++A+E +FP+ ++K+AL LE E+ W R
Sbjct: 90 KNLSSAEKRKFLVNTLLDLEDSKEGVYSTLDAWVAFEQDFPVASIKQALVALEKEEQWHR 149
Query: 107 IIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMI 166
I+QV KWM SKGQG+T+ TY L+ AL +D R DEA +W L+ P F M+
Sbjct: 150 IVQVIKWMSSKGQGKTIRTYEQLVCALEKDNRADEACRIWEFKIAHDLQSVPWRFCRLML 209
Query: 167 SIYYNRGMHEKMFEIFADMEELGVR-PNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
IYY +++ ++F ++E G + P+ IV + +A++ LG++++ ++L +KY
Sbjct: 210 GIYYRNNKLDRLVKLFKNLEACGRKPPSKDIVRKVEDAYEMLGLVEEKKELLEKY 264
>gi|414887017|tpg|DAA63031.1| TPA: EMB1417, mRNA [Zea mays]
Length = 147
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 84/140 (60%), Gaps = 1/140 (0%)
Query: 98 LENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT 157
L+ + W RIIQVTKW++SKGQ T TY LL AL D R+DEAE +W + H
Sbjct: 2 LKRRRQWLRIIQVTKWLMSKGQVLTWTTYDTLLLALLMDKRVDEAESVWNTVIQTHTRSV 61
Query: 158 PRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLK 217
P+ F +MI IY +K+ EIFADMEELGVRP+ +G AF G +K + +
Sbjct: 62 PKRLFSRMILIYDIHQRPDKVLEIFADMEELGVRPDEDTARRIGKAFVASGQEEKEKHVL 121
Query: 218 KKYPPPKWEYRYIKGKRVRI 237
+KY KW+Y + G+RVR+
Sbjct: 122 EKY-LKKWKYIHFNGERVRV 140
>gi|413935540|gb|AFW70091.1| hypothetical protein ZEAMMB73_191028 [Zea mays]
Length = 399
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 110/205 (53%), Gaps = 52/205 (25%)
Query: 89 ITVKKALKTLENEKDWKRI----IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEE 144
I K ++ +N +R+ + V KWM +KGQG+TMG+Y+ LLNAL E
Sbjct: 159 IHTNKTAQSAQNFSSIERLGMGNVHVIKWMFNKGQGKTMGSYYTLLNALIE--------- 209
Query: 145 LWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
+F GM IFADMEELGVRP+ SI+ M+G+ F
Sbjct: 210 ---------------LF-----------GM------IFADMEELGVRPDGSIIRMLGDVF 237
Query: 205 QKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSATEGKTN-----EVETT 259
QKL M+DKYEKLKKKYPPPKWEYRYIKGKR+RI + + A G + EVE+
Sbjct: 238 QKLEMMDKYEKLKKKYPPPKWEYRYIKGKRIRIRVYLDSKSEEAARGDPDNDELGEVESI 297
Query: 260 KNPNESSEEPEAAANLNESLEETEA 284
NE E EA+ L+ S+ + A
Sbjct: 298 HLDNELEE--EASLGLDRSVLDDAA 320
>gi|302798017|ref|XP_002980769.1| hypothetical protein SELMODRAFT_420330 [Selaginella moellendorffii]
gi|300151775|gb|EFJ18420.1| hypothetical protein SELMODRAFT_420330 [Selaginella moellendorffii]
Length = 233
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 85/151 (56%), Gaps = 4/151 (2%)
Query: 110 VTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIY 169
V KWM SKG G TM TY LL AL DGR+DE E +W + E PR+ + +MI++Y
Sbjct: 72 VIKWMFSKGHGFTMNTYGCLLRALDIDGRVDEVEHIWHTFVVTKQESVPRVMYARMITMY 131
Query: 170 YNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPK----W 225
R + +K ++F ++E G RP+ + + +G ++KLG +K +L +K+ P K +
Sbjct: 132 DRRALPDKAIKMFKELELSGTRPDPATIIRIGKIYEKLGFTNKTAELLEKHKPTKRFISF 191
Query: 226 EYRYIKGKRVRIPAKPKYELDSATEGKTNEV 256
++R K + +P + L S+ + K ++
Sbjct: 192 KFRTKSHKFMGVPGHDRRRLTSSEKQKKRKL 222
>gi|225433732|ref|XP_002269708.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform 2 [Vitis vinifera]
Length = 252
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 107 IIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMI 166
+ V KWMLSKGQG TMGTY L+ AL D R +EA E W K L P +MI
Sbjct: 92 VTTVVKWMLSKGQGTTMGTYGQLIRALDMDHRAEEAHEFWVKKIGTDLHSVPWHLCHRMI 151
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVS-IVSMMGNAFQKLGMLDKYEKLKKKY 220
S+YY M E + ++F +E +P +V + +A++ LG+L++ E++ +KY
Sbjct: 152 SVYYRNNMLENLVKLFKGLEAFDRKPQDKLVVKKVADAYEMLGLLEEKERIFEKY 206
>gi|195617340|gb|ACG30500.1| hypothetical protein [Zea mays]
Length = 102
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
Query: 194 VSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSATEG-- 251
+ + M+G+ FQKL M+DKYEKLKKKY PPKWEYR+IKGKR+RI P + A +G
Sbjct: 2 IICLRMLGDVFQKLEMMDKYEKLKKKYRPPKWEYRHIKGKRIRIRVYPDSNPEVAAKGDP 61
Query: 252 KTNEVETTKNPNESSEEPEAAAN 274
T+E+E ++ + ++E EAA++
Sbjct: 62 DTDELEELESTHLNNELDEAASS 84
>gi|226494526|ref|NP_001141572.1| uncharacterized protein LOC100273688 [Zea mays]
gi|194705116|gb|ACF86642.1| unknown [Zea mays]
gi|413915964|gb|AFW55896.1| hypothetical protein ZEAMMB73_595520 [Zea mays]
Length = 165
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 19/158 (12%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
MLSKGQG TM TY LL AL +D R +EA +W L P F M++IYY
Sbjct: 1 MLSKGQGNTMRTYELLACALEKDNRAEEAHRIWQNKVGHDLHSVPWRFCRLMLAIYYRNN 60
Query: 174 MHEKMFEIFADMEELGVR-PNVSIVSMMGNAFQKLG-------MLDKYEKLKKKYPPPKW 225
+++ ++F ++E G + P+ IV + +A++ LG +LDKY+ L Y P
Sbjct: 61 RLDRLVKLFKELEACGRKPPSKDIVRKVEDAYETLGLLEDKKVLLDKYKDL---YNKPSR 117
Query: 226 EYRYIKGKRVRIPAKPKYELDSATEGKTNE--VETTKN 261
+ R KG + + K E D ++G + E +ET++N
Sbjct: 118 DDRK-KGSKSK-----KIESDKPSDGDSKESKMETSEN 149
>gi|226500752|ref|NP_001144036.1| uncharacterized protein LOC100276860 [Zea mays]
gi|195635811|gb|ACG37374.1| hypothetical protein [Zea mays]
Length = 165
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 19/158 (12%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
MLSKGQG TM TY LL AL +D R +EA ++W L P F M++IYY
Sbjct: 1 MLSKGQGNTMRTYELLACALEKDNRAEEAHKIWQNKVGHDLHSVPWRFCRLMLAIYYRNN 60
Query: 174 MHEKMFEIFADMEELGVR-PNVSIVSMMGNAFQKLG-------MLDKYEKLKKKYPPPKW 225
+++ ++F ++E G + P+ IV + +A++ LG +LDKY+ L Y P
Sbjct: 61 RLDRLVKLFKELEACGRKPPSKDIVRKVEDAYETLGLLEDKKVLLDKYKDL---YNKPSR 117
Query: 226 EYRYIKGKRVRIPAKPKYELDSATEGKTNE--VETTKN 261
+ R K I E D ++G + E +ET++N
Sbjct: 118 DNRKKGSKSKNI------ETDKPSDGDSKESKMETSEN 149
>gi|413915963|gb|AFW55895.1| hypothetical protein ZEAMMB73_595520 [Zea mays]
Length = 173
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
MLSKGQG TM TY LL AL +D R +EA +W L P F M++IYY
Sbjct: 1 MLSKGQGNTMRTYELLACALEKDNRAEEAHRIWQNKVGHDLHSVPWRFCRLMLAIYYRNN 60
Query: 174 MHEKMFEIFADMEELGVR-PNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
+++ ++F ++E G + P+ IV + +A++ LG+L+ + L KY
Sbjct: 61 RLDRLVKLFKELEACGRKPPSKDIVRKVEDAYETLGLLEDKKVLLDKY 108
>gi|46931326|gb|AAT06467.1| At4g18975 [Arabidopsis thaliana]
gi|62320588|dbj|BAD95227.1| hypothetical protein [Arabidopsis thaliana]
Length = 152
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%)
Query: 41 RVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN 100
+WK G+ K+ LV + GL N KE VYGAL+ ++AWE+EFP+I KAL+ L
Sbjct: 84 HLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAAAKALQILRK 143
Query: 101 EKDWKRIIQ 109
W R+IQ
Sbjct: 144 RSQWHRVIQ 152
>gi|255604286|ref|XP_002538197.1| hypothetical protein RCOM_1887760 [Ricinus communis]
gi|223513334|gb|EEF24186.1| hypothetical protein RCOM_1887760 [Ricinus communis]
Length = 72
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 110 VTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELW-TKIFLDHLEGTPRIFFDKMISI 168
V KW++SKGQG TMGTY L+ AL D R +EA W KI LD L P +MIS+
Sbjct: 1 VIKWIISKGQGNTMGTYGQLIRALDMDHRANEAHMFWLKKIGLD-LHSVPWQLCHRMISV 59
Query: 169 YYNRGMHEKMFEI 181
YY M E + ++
Sbjct: 60 YYRNNMLESLVKV 72
>gi|224140309|ref|XP_002323525.1| predicted protein [Populus trichocarpa]
gi|222868155|gb|EEF05286.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Query: 123 MGTYFLLLNALAEDGRLDEAEELW-TKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEI 181
MGTY + AL D R EA E W TKI D L P ++MISIYY M E + ++
Sbjct: 1 MGTYAQFIRALDMDHRAKEAHEFWLTKIGRD-LHSVPWKLCNRMISIYYRNNMLENLIKL 59
Query: 182 FADMEELGVR-PNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
F +E + P SIV + ++++ LG+L++ E++ +KY
Sbjct: 60 FKGLEAFDRQPPEKSIVQKVADSYEMLGLLEEKERVLEKY 99
>gi|224077490|ref|XP_002305269.1| predicted protein [Populus trichocarpa]
gi|222848233|gb|EEE85780.1| predicted protein [Populus trichocarpa]
Length = 97
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/40 (70%), Positives = 34/40 (85%)
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPK 224
MEELG+RP+VSIV+M+G+ FQ+LGM DK EKLKKK P K
Sbjct: 1 MEELGLRPSVSIVNMVGSVFQRLGMTDKNEKLKKKIPTTK 40
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
++T + +L K ++ ++M +KG + +Y +LL+ A +GR + L+
Sbjct: 369 IVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFH 428
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+ + F + +IS + RGM ++ +F +M+ GVRP+V S + +AF ++
Sbjct: 429 SMADKGIVANCHCF-NILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRM 487
Query: 208 GML-DKYEKLKK 218
G L D EK +
Sbjct: 488 GRLADAMEKFSQ 499
>gi|326509733|dbj|BAJ87082.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 189
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 38/55 (69%)
Query: 58 LVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTK 112
L+ + L + KE VY LD++IA+E +FPL ++K+A+ LE E+ W RI+QV +
Sbjct: 114 LIHTLLDLEDSKEAVYSTLDAWIAFEQDFPLASLKQAIVALEKEEQWHRIVQVLQ 168
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L T +K+ R+ +V K M S G T+GTY +L++ L+ G + + E ++ +I ++
Sbjct: 175 LDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNV 234
Query: 155 EGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYE 214
G F+ +I+ Y G + E+F + G+ PN + N F K+G ++ E
Sbjct: 235 AGDV-YFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAE 293
Query: 215 KL 216
L
Sbjct: 294 ML 295
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY L+N + G+++ AE L T + L + G +I F+ MI Y GM +K EI A
Sbjct: 275 TYGALINGFCKIGQIEAAEMLLTDMQLRGV-GHNQIIFNTMIDGYCRHGMVDKALEIKAV 333
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
ME +G++ +V + + ++ ++ +KL
Sbjct: 334 MERMGIQLDVYTYNTLACGLCRVNRMEDAKKL 365
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 86/199 (43%), Gaps = 19/199 (9%)
Query: 39 YPRVWKARKRIGTISKSAKLVT-CIKGLSNVKEEVYGAL-DSFI---AWELEFPLITVKK 93
Y V A R G + +++++ C+ E YGAL + F E L+T +
Sbjct: 241 YSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQ 300
Query: 94 ALKTLENEKDWKRIIQ-------VTKWMLSKGQGRTMG------TYFLLLNALAEDGRLD 140
N+ + +I V K + K MG TY L L R++
Sbjct: 301 LRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRME 360
Query: 141 EAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMM 200
+A++L + + +E + + + +ISI+ G + +F DME G RP+V ++M
Sbjct: 361 DAKKLLHIMTENGVE-SNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVM 419
Query: 201 GNAFQKLGMLDKYEKLKKK 219
+ + K G + + E+ KK+
Sbjct: 420 IDGYIKSGSIREAERFKKE 438
>gi|414887053|tpg|DAA63067.1| TPA: hypothetical protein ZEAMMB73_239988 [Zea mays]
Length = 107
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%)
Query: 115 LSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGM 174
+SKGQ T TY LL AL D R+DEAE +W + H P+ F +MI IY
Sbjct: 1 MSKGQVLTWTTYDTLLLALLMDKRVDEAESVWNTVIQTHTRSVPKRLFSRMILIYDIHQR 60
Query: 175 HEKMFEIFADMEELGV 190
+K+ E++ L V
Sbjct: 61 PDKVLEVYLTHLHLLV 76
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 5/119 (4%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
KD + I Q +M +KG + +Y +LL+ A +GR + L+ + +
Sbjct: 353 SKDAEEIFQ---YMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHC 409
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML-DKYEKLKK 218
+ +IS + RGM ++ +F +M+ GVRPNV S + +AF ++G L D EK +
Sbjct: 410 I-NILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQ 467
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 23/199 (11%)
Query: 15 FEPIKISRNARSLVVCAARGPRPRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYG 74
F PI I N+ C+ +P+ +R R SK+AK I L N K G
Sbjct: 17 FIPISIF-NSHLRYFCSDPQEQPQ-----NSRPRSRNASKTAKT---IANLINSKPFSNG 67
Query: 75 ALDSFIAWELEFPLITVKK--ALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNA 132
L S LIT+ K L+TL KD + ++ KW KG T +YF++L
Sbjct: 68 LLSSL--------LITISKTTVLRTLRLIKDPSKALRFFKWTQQKGFSHTPESYFIMLEI 119
Query: 133 LAEDGRLDEAEELWTKIFLDHLEGTPRI---FFDKMISIYYNRGMHEKMFEIFADMEELG 189
L + L+ A I H +GT ++ FF+ +I Y G+ ++ ++F M+ +
Sbjct: 120 LGRERNLNVARNFLFSI-EKHSKGTVKLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIA 178
Query: 190 VRPNVSIVSMMGNAFQKLG 208
V P+V + + + K G
Sbjct: 179 VSPSVVTFNSLMSILLKRG 197
>gi|449478943|ref|XP_004155460.1| PREDICTED: uncharacterized protein LOC101227783 [Cucumis sativus]
Length = 141
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 123 MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIF 182
M Y L+ AL D R +EA + W L P M++IYY E + ++F
Sbjct: 1 MNVYGQLIRALDMDHRGEEAHKFWVMKIGSDLHSVPWQVCRSMMAIYYRNKRLEDLVKLF 60
Query: 183 ADMEELGVR-PNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
D+E G + P+ SIV + +A + LG+L++ E++ KY
Sbjct: 61 KDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKY 99
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
++T+ + +L K V M KGQ + +Y ++LN A G L + +L+
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFD 383
Query: 148 KIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
+ D + P I+ F+ +I Y N GM +K IF +M + GV+P+V + A +
Sbjct: 384 LMLGDGI--APDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR 441
Query: 207 LG-MLDKYEK----LKKKYPPPKWEYRYI 230
+G M D EK + + P K+ Y +
Sbjct: 442 IGKMDDAMEKFNQMIDQGVAPDKYAYHCL 470
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 74/168 (44%), Gaps = 15/168 (8%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEG-TPRIF- 161
WK ++V K M + T +L+ +L + G++ EA +++ + ++G P +F
Sbjct: 305 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTM---AMKGQNPNVFS 361
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKY-----EKL 216
+ M++ Y +G M ++F M G+ P++ +++ A+ GMLDK E
Sbjct: 362 YTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMR 421
Query: 217 KKKYPPPKWEYRYIKGKRVRIPAKPKYELDSATEGKTNEVETTKNPNE 264
P YR + RI ++D A E ++ P++
Sbjct: 422 DHGVKPDVVTYRTVIAALCRIG-----KMDDAMEKFNQMIDQGVAPDK 464
>gi|449465242|ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 690
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Query: 82 WELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDE 141
W+L T + L+ +D R V M SKG + Y +LL+ALA+D +LD
Sbjct: 233 WDLRLNAYTYRCLLQAHIRSRDSDRAFNVYMEMWSKGYQLDIFAYNMLLDALAKDEQLDR 292
Query: 142 AEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMG 201
+ +++ + L H + MI + G E+ +F +M G PN+ + M
Sbjct: 293 SYKVFKDMKLKHC-NPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMI 351
Query: 202 NAFQKLGMLDK 212
A K GM+DK
Sbjct: 352 QALSKSGMVDK 362
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 79/191 (41%), Gaps = 9/191 (4%)
Query: 30 CAARGPRPRYPRVWKARKRIGTISKSAKLV-------TCIKGLSNVKE--EVYGALDSFI 80
C G R + W R+ G + A+ V + I GL + E Y L+ +
Sbjct: 22 CHVHGSHRRALQRWPGRRGCGAAVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMV 81
Query: 81 AWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLD 140
+ T + K ++V + ++++G + TY L++ L ++GRL
Sbjct: 82 YSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLK 141
Query: 141 EAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMM 200
EA +L+ ++ + ++ +IS + G ++ + M E G P+V + +
Sbjct: 142 EAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 201
Query: 201 GNAFQKLGMLD 211
N F KL LD
Sbjct: 202 MNGFCKLARLD 212
>gi|356521277|ref|XP_003529283.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Glycine max]
Length = 379
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 73/148 (49%), Gaps = 6/148 (4%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
L+T +K + + + V + + KG T+ LL+ L GR +E E++W
Sbjct: 162 LVTYNTIIKAFCEKGSFDSALSVLREIEEKGLSPDSITFNTLLDGLYSKGRFEEGEKVWE 221
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
++ ++++ R + K++ + + E + E+F +ME++GV+P++ ++ + F
Sbjct: 222 QMSVNNVAPGVRSYCSKLVGLAEVKKAGEAV-ELFREMEKVGVKPDLFCINAVIKGFVNE 280
Query: 208 GMLDKYEK-----LKKKYPPPKWEYRYI 230
G LD+ +K K +Y P K Y I
Sbjct: 281 GNLDEAKKWFGEIAKSEYDPDKNTYSII 308
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
++T + +L K V M KGQ + +Y ++LN A G L + +L+
Sbjct: 324 VVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383
Query: 148 KIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
+ D + P I F+ +I Y N GM +K IF +M + GV+PNV + + A +
Sbjct: 384 LMLGDGI--APVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCR 441
Query: 207 LG-MLDKYEK----LKKKYPPPKWEYRYI 230
+G M D EK + + P K+ Y +
Sbjct: 442 IGKMDDAMEKFNQMIDQGVAPDKYAYHCL 470
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
++T+ + +L K V M KGQ + +Y ++LN A G L + +L+
Sbjct: 328 VVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFD 387
Query: 148 KIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
+ D + P I+ F +I Y N GM +K IF +M + GV+P+V + + A +
Sbjct: 388 LMLGDGI--APDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCR 445
Query: 207 LG-MLDKYEK----LKKKYPPPKWEYRYI 230
+G M D EK + + P K+ Y +
Sbjct: 446 IGKMDDAMEKFNQMIDQGVAPDKYAYHCL 474
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 14/127 (11%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
++N L + GR+ +A+ ++ + ++ + + + ++ Y G EK +F M
Sbjct: 509 IINNLCKLGRIMDAQNIF-DLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 567
Query: 189 GVRPNVSIVSMMGNAFQKLGMLDK-----YEKLKKKYPPPKWEYR------YIKGKRVRI 237
G+ PNV + + N + K+G +D+ E L+K P Y ++ G+ V
Sbjct: 568 GIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTV-- 625
Query: 238 PAKPKYE 244
PAK K+
Sbjct: 626 PAKVKFH 632
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEG-TPRIF- 161
WK ++V K M + T +L+ +L + G++ EA +++ + ++G P +F
Sbjct: 309 WKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTM---AMKGQNPDVFS 365
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ M++ Y +G M ++F M G+ P++ S++ A+ GMLDK
Sbjct: 366 YKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDK 416
>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 685
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 82 WELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDE 141
W+L T + L+ +D R V M S G + Y +LL+ALA+D +LD
Sbjct: 228 WDLRLNAYTYRCLLQAHIRSRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLDR 287
Query: 142 AEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMG 201
+ +++ + L H + MI + G E+ +F +M G PN+ + M
Sbjct: 288 SYKVFKDMKLKHC-NPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMI 346
Query: 202 NAFQKLGMLDK-----YEKLKKKYPPPKWEYRYI 230
A K GM+DK +K P ++ Y I
Sbjct: 347 QALSKSGMVDKAILLFCNMIKNNCRPNEFTYSII 380
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 110 VTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISI 168
V M KGQ + +Y ++LN A G L + +L+ + D + P I+ F+ +I
Sbjct: 348 VFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI--APDIYTFNVLIKA 405
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG-MLDKYEK----LKKKYPPP 223
Y N GM +K IF +M + GV+P+V + A ++G M D EK + + P
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 465
Query: 224 KWEYRYI 230
K+ Y +
Sbjct: 466 KYAYHCL 472
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 85/213 (39%), Gaps = 39/213 (18%)
Query: 38 RYPRVWKARKRIGTISKSAKLVT---CIKGLSNVKE--EVYGALDSFIAWELEFPLITVK 92
RY R+ AR+ I ++ T I+GL + + LD + + ++T
Sbjct: 121 RYGRLDAARRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYT 180
Query: 93 KALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI--- 149
L+ + + + V M +KG + TY +++N + +GR+D+A+E+ ++
Sbjct: 181 VLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSY 240
Query: 150 -----------FLDHLEGTPR--------------------IFFDKMISIYYNRGMHEKM 178
L L R + FD ++ + GM E+
Sbjct: 241 GFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERA 300
Query: 179 FEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
++ M + G PN ++ +++ NA K G +D
Sbjct: 301 IQVLQQMSQHGCTPNTTLCNIVINAICKQGRVD 333
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 110 VTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISI 168
V M++KG + +Y +L+N + R+DEA EL+ ++ L P F ++ +IS
Sbjct: 351 VFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGL--IPNTFNYNTLISG 408
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
G H + E+F DM+ G P++ +++ ++ KLG LD +L
Sbjct: 409 LCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRL 456
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
++T+ + +L K V M KGQ + +Y ++LN A G L + +L+
Sbjct: 337 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 396
Query: 148 KIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
+ D + P + F+ +I Y N GM +K IF +M + GV+P+V + A +
Sbjct: 397 LMLGDGI--APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR 454
Query: 207 LG-MLDKYEK----LKKKYPPPKWEY 227
+G M D EK + + P K+ Y
Sbjct: 455 IGKMDDAMEKFNQMIDQGVAPDKYAY 480
>gi|242056929|ref|XP_002457610.1| hypothetical protein SORBIDRAFT_03g010260 [Sorghum bicolor]
gi|241929585|gb|EES02730.1| hypothetical protein SORBIDRAFT_03g010260 [Sorghum bicolor]
Length = 1089
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 122 TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEI 181
T+ TY +L+ AL +G LD+A++L+ K+ ++ T R+ ++ +IS Y N G+ EK E+
Sbjct: 790 TIITYTILIGALCREGLLDDADQLFQKMSTKGIKPTTRV-YNLLISGYCNFGLTEKALEL 848
Query: 182 FADMEELGVRPN 193
+ +EEL + P+
Sbjct: 849 MSHLEELFLLPD 860
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
++T+ + +L K V M KGQ + +Y ++LN A G L + +L+
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383
Query: 148 KIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
+ D + P + F+ +I Y N GM +K IF +M + GV+P+V + A +
Sbjct: 384 LMLGDGI--APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR 441
Query: 207 LG-MLDKYEK----LKKKYPPPKWEY 227
+G M D EK + + P K+ Y
Sbjct: 442 IGKMDDAMEKFNQMIDQGVAPDKYAY 467
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
++T+ + +L K V M KGQ + +Y ++LN A G L + +L+
Sbjct: 327 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 386
Query: 148 KIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
+ D + P + F+ +I Y N GM +K IF +M + GV+P+V + A +
Sbjct: 387 LMLGDGI--APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR 444
Query: 207 LG-MLDKYEK----LKKKYPPPKWEY 227
+G M D EK + + P K+ Y
Sbjct: 445 IGKMDDAMEKFNQMIDQGVAPDKYAY 470
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 87/221 (39%), Gaps = 45/221 (20%)
Query: 38 RYPRVWKARKRIGTISKSAKL--------VTCIKGLSNVKEEVYGALDSFIAWELEFPLI 89
RY + AR+ IG++ + V C +G + LD + + ++
Sbjct: 123 RYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRV---ADALSLLDDMLRRGCQPNVV 179
Query: 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI 149
T L+ + +++ + V M +KG + TY +++N + +GR+D+A EL ++
Sbjct: 180 TYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRL 239
Query: 150 --------------FLDHLEGTPR--------------------IFFDKMISIYYNRGMH 175
L L + R + FD +I + GM
Sbjct: 240 PSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMV 299
Query: 176 EKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
E+ ++ M E G N ++ +++ N+ K G +D KL
Sbjct: 300 ERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKL 340
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 68/151 (45%), Gaps = 1/151 (0%)
Query: 66 SNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGT 125
S ++ +G LD + L + +++ + + K M ++G T+GT
Sbjct: 161 SGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGT 220
Query: 126 YFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADM 185
Y +L++ L+ G + + E ++ ++ ++ G F+ +I+ Y G + E+F +
Sbjct: 221 YTILVDGLSRAGDISKVEAVYDEMKRKNVAGDV-YFYSAVINAYCRGGNVRRASEVFDEC 279
Query: 186 EELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
GV PN + N F K+G ++ E L
Sbjct: 280 VGHGVEPNERTYGALINGFCKIGQIEAAEML 310
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY L+N + G+++ AE L + L + G +I F+ MI Y GM EK EI A
Sbjct: 290 TYGALINGFCKIGQIEAAEMLLADMQLRGV-GHNQIVFNTMIDGYCRHGMVEKALEIKAV 348
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
ME++G+ ++ + + ++ ++ +KL
Sbjct: 349 MEKMGIELDIYTYNTLACGLCRVNRMEDAKKL 380
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 83/168 (49%), Gaps = 12/168 (7%)
Query: 73 YGALDSFIAWELEFPLITVKKALKTLENEKDWK-RIIQVT---KWMLSKGQGRTMGTYFL 128
+ + D ++ LE +I K L NE K ++I+ + M+ +G TY +
Sbjct: 541 FASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTV 600
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEE 187
L+N L ++G++++AEE++ ++ + P +F + +I + G +K IF +M +
Sbjct: 601 LMNGLVKNGKVNDAEEIFHEMRGKGI--APDVFSYGTLIDGFSKLGNMQKASSIFDEMVQ 658
Query: 188 LGVRPNVSIVSMMGNAFQKLGMLDKYEKL-----KKKYPPPKWEYRYI 230
G+ NV I +M+ F + G ++K ++L K +PP Y I
Sbjct: 659 AGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTI 706
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY ++++ L ++G L+ A+EL+ + +L T I + +++ Y G +MF +F +
Sbjct: 810 TYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTV-ITYTSLLNGYDKMGRRSEMFSVFDE 868
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ G+ P+ + S++ NAF K GM K
Sbjct: 869 VIAAGIEPDNIMYSVIINAFLKEGMTTK 896
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
M+ +G T+ TY LL++AL DGR EA EL ++ L P +F ++ +I+ +
Sbjct: 617 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL--APDVFTYNILINGHCKE 674
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
G +K EIF +M GVR V + + A K G + + +KL
Sbjct: 675 GNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKL 718
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
E + K+ +++ + M +G T+ TY L+ AL++ G++ E ++L+ + + +
Sbjct: 674 EGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIR-PDLV 732
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
++ +I+ + G ++ FEI +ME+ + P+ + + LG +D+ KL
Sbjct: 733 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 788
>gi|414591629|tpg|DAA42200.1| TPA: hypothetical protein ZEAMMB73_531547 [Zea mays]
Length = 462
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMIS 167
V M KGQ + +Y ++LN A G L + +L+ + D + P I+ F+ +I
Sbjct: 15 DVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI--APDIYTFNVLIK 72
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG-MLDKYEK----LKKKYPP 222
Y N GM +K IF +M + GV+P+V + A ++G M D EK + + P
Sbjct: 73 AYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVP 132
Query: 223 PKWEYRYI 230
K+ Y +
Sbjct: 133 DKYAYHCL 140
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
M+ +G T+ TY LL++AL DGR EA EL ++ L P +F ++ +I+ +
Sbjct: 612 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL--APDVFTYNILINGHCKE 669
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
G +K EIF +M GVR V + + A K G + + +KL
Sbjct: 670 GNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKL 713
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
E + K+ +++ + M +G T+ TY L+ AL++ G++ E ++L+ + + +
Sbjct: 669 EGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIR-PDLV 727
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
++ +I+ + G ++ FEI +ME+ + P+ + + LG +D+ KL
Sbjct: 728 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 783
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
++ L +L K ++ M +KG + +Y LL+ A +G + L+
Sbjct: 370 IVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFN 429
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+ + + R+F + +I Y RGM + IF +M++ GV P+V S + +AF ++
Sbjct: 430 SMKSNGIAADCRVF-NILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRM 488
Query: 208 GML-DKYEKLKK 218
G L D EK +
Sbjct: 489 GRLTDAMEKFNQ 500
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 6/115 (5%)
Query: 114 MLSKGQGRTMGTYF-LLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNR 172
M++KG R +F ++N+L +DGR+ +A +++ + D E I F +I Y
Sbjct: 536 MINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIF-DLVTDIGERPDVITFTSLIDGYCLV 594
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKKKYPPP 223
G +K F+I ME +GV ++ S + + + K G ++ + ++++K P
Sbjct: 595 GKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKP 649
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 5/159 (3%)
Query: 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL 129
EE Y L+ +A + ++ + ++ +V + M+ G +Y +L
Sbjct: 133 EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 192
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEEL 188
++ LA+ G+LDE+ ++ +++ + P + F +I G EK E+F M E
Sbjct: 193 IHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEA 252
Query: 189 GVRPN----VSIVSMMGNAFQKLGMLDKYEKLKKKYPPP 223
G +PN ++++ + A + + + +EK+ + PP
Sbjct: 253 GCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPP 291
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
++T+ + +L K V M KGQ + +Y ++LN A G L + EL+
Sbjct: 321 VVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFN 380
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+ D + I F+ +I Y GM ++ IF +M E GV P+V S + A ++
Sbjct: 381 LMLSDGIAPDSHI-FNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRI 439
Query: 208 G-MLDKYEKLKK 218
G M D EK +
Sbjct: 440 GKMDDAVEKFNQ 451
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 12/141 (8%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
M++KG +G + ++N L + GR+ +A+ ++ F + P + ++ ++ Y
Sbjct: 487 MMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFD--FTISIGLHPNVMVYNTLMDGYCLV 544
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK-----YEKLKKKYPPPKWEY 227
G E +F M G++PNV + + N + K+G +D+ E L K P Y
Sbjct: 545 GKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLY 604
Query: 228 RYIKGKRVR----IPAKPKYE 244
I + +PAK K+
Sbjct: 605 NIILHGLFQAGRTVPAKVKFH 625
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 11/168 (6%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163
WK ++V+K M S+G + T L+ +L + G++ +A +++ + + + T +
Sbjct: 302 WKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKG-QKTDIFSYK 360
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKY-----EKLKK 218
M++ Y +G + E+F M G+ P+ I +++ A+ K GMLD+ E ++
Sbjct: 361 IMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQ 420
Query: 219 KYPPPKWEYRYIKGKRVRIPAKPKYELDSATEGKTNEVETTKNPNESS 266
P Y + RI ++D A E ++ P+ S+
Sbjct: 421 GVEPDVVTYSTVIAALCRIG-----KMDDAVEKFNQMIDQGVAPSIST 463
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMI 166
+Q + M+ +G T+ TY LL++AL DGR +A + ++ + L +P +F ++ +I
Sbjct: 239 LQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGL--SPDVFTYNILI 296
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
+ Y G +K E+F +M GVR + + AF + G + + ++L K
Sbjct: 297 NGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFK 348
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
E + K+ ++V + M KG T TY L+ A + G++ E + L+ K+ + +
Sbjct: 302 EGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLF-KVAVKKGIRPDVV 360
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
++ +I+ + G E+ FEI A+ME+ + P+ + + F LG LD+ L
Sbjct: 361 MYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGL 416
>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 805
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 76/216 (35%), Gaps = 36/216 (16%)
Query: 27 LVVCAARGPRPRYPRVWKARK--RIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWEL 84
L VC RG RV + K ++ + + C G + + D A
Sbjct: 436 LAVCGKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAGF 495
Query: 85 EFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEE 144
L T L L + DW + M S+G +Y LLL A+ G E
Sbjct: 496 APCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQCHAKGGNAAGIEA 555
Query: 145 LWTKIF--------------------LDHLEGTPRIF--------------FDKMISIYY 170
+ +++ LEG R F + M+SIY
Sbjct: 556 IEKEVYQGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYA 615
Query: 171 NRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
G++ K E+F +E+LG+ P++ + + + + K
Sbjct: 616 KNGLYSKAMEMFESIEQLGLSPDLITYNSLMDMYAK 651
>gi|356524760|ref|XP_003530996.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Glycine max]
Length = 381
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 6/148 (4%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
L+T +K + + + V + + KG T+ LL+ L GR +E E++W
Sbjct: 164 LVTYNTIIKAFCEKGSFDSALSVFQEIEEKGLSPDSITFNTLLDGLYSKGRFEEGEKVWE 223
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
++ + ++ R + K++ + + M E + +F +ME+LGV+P++ ++ + F
Sbjct: 224 QMGVKNVAPGVRSYCSKLVGLAEVKKMGEAVV-LFREMEKLGVKPDLFCINAVIKGFVNE 282
Query: 208 GMLDKYEK-----LKKKYPPPKWEYRYI 230
G LD+ +K K +Y P + Y I
Sbjct: 283 GNLDEAKKWFGEIAKFEYDPDRNTYSII 310
>gi|218187928|gb|EEC70355.1| hypothetical protein OsI_01278 [Oryza sativa Indica Group]
Length = 344
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 122 TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEI 181
T+ TY +L+ AL +G LD+A EL+ K+ ++ T R+ ++ +IS Y N G+ EK E+
Sbjct: 44 TLVTYSILIAALCREGFLDDAHELFQKMSTKGIKPTTRV-YNLLISGYCNYGLTEKALEL 102
Query: 182 FADMEELGVRPNVSIVSMMGNA 203
+ EE+ + P+ + + N
Sbjct: 103 ISHFEEIFLFPDAITIGAIING 124
>gi|125569816|gb|EAZ11331.1| hypothetical protein OsJ_01195 [Oryza sativa Japonica Group]
Length = 943
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 122 TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEI 181
T+ TY +L+ AL +G LD+A EL+ K+ ++ T R+ ++ +IS Y N G+ EK E+
Sbjct: 643 TLVTYSILIAALCREGFLDDAHELFQKMSTKGIKPTTRV-YNLLISGYCNYGLTEKALEL 701
Query: 182 FADMEELGVRPNVSIVS-------MMGNAFQKLGMLDKY 213
+ EE+ + P+ + + G+ LG +Y
Sbjct: 702 ISHFEEIFLFPDAITIGAIINGHCLKGDIESALGFFSEY 740
>gi|56783835|dbj|BAD81247.1| fertility restorer -like [Oryza sativa Japonica Group]
Length = 1090
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 122 TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEI 181
T+ TY +L+ AL +G LD+A EL+ K+ ++ T R+ ++ +IS Y N G+ EK E+
Sbjct: 790 TLVTYSILIAALCREGFLDDAHELFQKMSTKGIKPTTRV-YNLLISGYCNYGLTEKALEL 848
Query: 182 FADMEELGVRPNVSIVS-------MMGNAFQKLGMLDKY 213
+ EE+ + P+ + + G+ LG +Y
Sbjct: 849 ISHFEEIFLFPDAITIGAIINGHCLKGDIESALGFFSEY 887
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Query: 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL 129
EEV + A +LE + T L L + M+ KG ++ Y ++
Sbjct: 417 EEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIM 476
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
L+ + G L E +L + + + RIF + +I Y R M +++ IF M++ G
Sbjct: 477 LHGYGKKGALSEMHDLLNLMVANGISPNHRIF-NTVICAYAKRAMIDEVMHIFIKMKQQG 535
Query: 190 VRPNVSIVSMMGNAFQKLGMLD 211
+ PNV + +A KLG +D
Sbjct: 536 LSPNVVTYGTLIDALCKLGRVD 557
>gi|302753376|ref|XP_002960112.1| hypothetical protein SELMODRAFT_402120 [Selaginella moellendorffii]
gi|300171051|gb|EFJ37651.1| hypothetical protein SELMODRAFT_402120 [Selaginella moellendorffii]
Length = 677
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 150 FLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
+ L+ T + MIS+Y MHEKM ++ DM+ELGV+P + IV +M + K
Sbjct: 187 LIKDLKPTTPALYSSMISVYAFLAMHEKMLALYTDMKELGVKPTLEIVMLMLLKYHK 243
>gi|157871031|ref|XP_001684065.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68127133|emb|CAJ04809.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 394
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161
KD+ + K S G + TY LL++L G+L + EL+ + H+ TP +
Sbjct: 147 KDYSLALAAVKGAKSAGLRISASTYEALLSSLMSGGQLRASMELYKAMIKQHVAPTPNM- 205
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRP 192
+ ++ + RGM + +F DM++ GVRP
Sbjct: 206 YAALMEMCLQRGMPKACQSLFDDMQQRGVRP 236
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
++T+ + +L K V M KGQ + +Y ++LN A G L + +L+
Sbjct: 290 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 349
Query: 148 KIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
+ D + P + F+ I Y N GM +K IF +M + GV+P+V + A +
Sbjct: 350 LMLGDGI--APDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR 407
Query: 207 LG-MLDKYEK----LKKKYPPPKWEYRYI 230
+G M D EK + + P K+ Y +
Sbjct: 408 IGKMDDAMEKFNQMIDQGVAPDKYAYNCL 436
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 110 VTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISI 168
V M KGQ + +Y ++LN A G L + +L+ + D + P I F+ +I
Sbjct: 348 VFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI--APVICTFNVLIKA 405
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG-MLDKYEK----LKKKYPPP 223
Y N GM +K IF +M + GV+P+V + A ++G M D EK + + P
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 465
Query: 224 KWEYRYI 230
K+ Y +
Sbjct: 466 KYAYHCL 472
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 5/133 (3%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
++T + +L K + M +KG + TY +LL+ A +G + L+
Sbjct: 332 IVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFN 391
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+ + + R+F + +I Y RGM ++ IF M+E GV P+ ++ AF ++
Sbjct: 392 SMEGNGIVADQRVF-NIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRM 450
Query: 208 GML----DKYEKL 216
G L DK+ ++
Sbjct: 451 GRLADAMDKFNQM 463
>gi|357498269|ref|XP_003619423.1| hypothetical protein MTR_6g052450 [Medicago truncatula]
gi|355494438|gb|AES75641.1| hypothetical protein MTR_6g052450 [Medicago truncatula]
Length = 142
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 7/62 (11%)
Query: 1 MLSLSYSLPPFTKIFEPIKISRNARSLVVCAARGPRPRYPRVWKARKRIGTISKSAKLVT 60
MLSLS S K ++ I IS N RS+VV + YPRVWK K+IGTISK+AKLV
Sbjct: 1 MLSLSNSPLLIAKPYQQINIS-NKRSIVV------QDLYPRVWKTNKKIGTISKAAKLVQ 53
Query: 61 CI 62
I
Sbjct: 54 SI 55
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 58 LVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSK 117
L+TC K ++ +E + A + +T L K ++V M+
Sbjct: 285 LITCCK-RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLN 343
Query: 118 GQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT-PRIF-FDKMISIYYNRGMH 175
G ++ TY L++A A DG LDEA EL ++ +GT P +F + ++S + G
Sbjct: 344 GFSPSIVTYNSLISAYARDGMLDEAMELKNQM---AEKGTKPDVFTYTTLLSGFERAGKV 400
Query: 176 EKMFEIFADMEELGVRPNVSIVSMMGNAFQKL-GMLDKYEKLKKKY 220
E IF +M G +PN+ NAF K+ G K+ ++ K +
Sbjct: 401 ESAMSIFEEMRNAGCKPNICTF----NAFIKMYGNRGKFTEMMKIF 442
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 54/117 (46%), Gaps = 4/117 (3%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTM---GTYFLLLNALAEDGRLDEAEELWTKIFL 151
LK L K + ++ W + + ++M ++++ L ++GR+ A ++ +
Sbjct: 142 LKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQE 201
Query: 152 DHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
D + +IS + N G + + +F MEE G +P + +++ N F K+G
Sbjct: 202 DGFS-LDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMG 257
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
M+ +G T+ TY LL++AL DGR EA EL ++ L P +F ++ +I+ +
Sbjct: 243 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL--APDVFTYNILINGHCKE 300
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
G +K EIF +M GVR V + + A K G + + +KL
Sbjct: 301 GNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKL 344
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
E + K+ +++ + M +G T+ TY L+ AL++ G++ E ++L+ + + +
Sbjct: 300 EGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIR-PDLV 358
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
++ +I+ + G ++ FEI +ME+ + P+ + + LG +D+ KL
Sbjct: 359 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 414
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 5/174 (2%)
Query: 41 RVWKARKRIGTISKSAKLVTCIKGLSNVKE--EVYGALDSFIAWELEFPLITVKKALKTL 98
R+ ++R R + ++ + IK SN E + LD F + L T L L
Sbjct: 146 RLLESRDRPAAVGRAR--IHMIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQL 203
Query: 99 ENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP 158
++ +L +G + Y ++NAL +DG + +AE + K+F ++
Sbjct: 204 NKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDT 263
Query: 159 RIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ ++ NR + + FEIF M+E G PN + S + N G +++
Sbjct: 264 FTYTSMILGYCRNRDL-DSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNE 316
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 69/160 (43%), Gaps = 3/160 (1%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
++T + L N +++ M+ G + TY L+ AL ++GR++EAEE+++
Sbjct: 610 VVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFS 669
Query: 148 KIFLDHLEGTP-RIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
++ L P + + KMI + G ++ F+ +M G +P + ++ Q
Sbjct: 670 ELKKQGL--IPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQN 727
Query: 207 LGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELD 246
+ K L ++ + I + + + ELD
Sbjct: 728 EMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELD 767
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161
+D ++ M +G TY L+N L GR++EA + +++ + T F
Sbjct: 277 RDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTF 336
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNV 194
++++ + G E ++IF DM++ G +PNV
Sbjct: 337 TAPIVALC-DMGRIEDAWKIFIDMKKKGCKPNV 368
>gi|302804554|ref|XP_002984029.1| hypothetical protein SELMODRAFT_445736 [Selaginella moellendorffii]
gi|300148381|gb|EFJ15041.1| hypothetical protein SELMODRAFT_445736 [Selaginella moellendorffii]
Length = 547
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 150 FLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
+ L+ T + MIS+Y MHEKM ++ DM+ELG++P + IV +M + K
Sbjct: 187 LIKDLKPTTPALYSSMISVYAFLAMHEKMLALYTDMKELGIKPTLEIVMLMLLKYHK 243
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEG---TPRI 160
WK ++++ + M + G TY LLN L ++GR EA + F D + G P +
Sbjct: 289 WKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREA-----RFFFDSMIGKGIKPSV 343
Query: 161 -FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEK 215
+ M+ Y +G +M ++ M G+ PN I ++ +A+ K G++DK + K
Sbjct: 344 TTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNK 403
Query: 216 LKKKYPPP 223
++++ P
Sbjct: 404 MRQQGLSP 411
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M+ KG ++ TY ++L+ A G L E +L + + + IF + S Y G
Sbjct: 334 MIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIF-NIFFSAYAKCG 392
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYE 214
+ +K +IF M + G+ P+ + +A KLG +D E
Sbjct: 393 IIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAE 433
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 68/140 (48%), Gaps = 7/140 (5%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T L + D + +++V M++ G + +Y +++AL + GR+DEA ++ +
Sbjct: 312 VTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDE 371
Query: 149 IFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPN----VSIVSMMGNA 203
+ + +P + ++ +IS + M ++ E+F M G PN V ++ G +
Sbjct: 372 MKEKGM--SPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKS 429
Query: 204 FQKLGMLDKYEKLKKKYPPP 223
Q L + +YE +K K P
Sbjct: 430 GQSLKAIQRYEHMKSKGIVP 449
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 68/140 (48%), Gaps = 7/140 (5%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T L + D + ++++ M++ G + +Y +++AL + GRLDEA ++ +
Sbjct: 319 VTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDE 378
Query: 149 IFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPN----VSIVSMMGNA 203
+ + +P + ++ +IS + M ++ E+F M G PN V ++ G +
Sbjct: 379 MKEKGI--SPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKS 436
Query: 204 FQKLGMLDKYEKLKKKYPPP 223
Q L + +YE +K K P
Sbjct: 437 GQSLKAIQRYEHMKSKGIVP 456
>gi|357115308|ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Brachypodium distachyon]
Length = 570
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
+IT ++ EKD++ + + M SKG + TY ++++AL + GR EA +++
Sbjct: 299 VITYTSLIEAYCMEKDFQTVYAILNEMCSKGCRPNVITYTIVMHALGKAGRTQEALDVFD 358
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNA 203
K+ D F++ +I I G E +F +M G+ P V+I + M +A
Sbjct: 359 KVKRDGCVPDAS-FYNSIIYILGRAGRLEDANSVFDEMCRTGIPPTVAIFNTMISA 413
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L EKD R+ ++ K M ++G T+GTY +L++ L+ + + E ++ ++ +L
Sbjct: 185 LDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNL 244
Query: 155 EGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYE 214
G F+ +I+ Y G + E+F + G+ PN + N F K+G ++ E
Sbjct: 245 SGDV-YFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAE 303
Query: 215 KL 216
L
Sbjct: 304 ML 305
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY L+N + G+++ AE L T + + + G +I F+ MI Y + M +K EI
Sbjct: 285 TYGALINGFCKIGQMEAAEMLVTDMQVRGV-GINQIVFNTMIDGYCRKNMVDKALEIKMI 343
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
ME++G+ +V + + ++ +D+ + L
Sbjct: 344 MEKMGIELDVYTYNTLACGLRRANRMDEAKNL 375
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T + L + + I + M++ GQ + TY +LL+ L + LDEA L
Sbjct: 383 VTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKT 442
Query: 149 IFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
I +++ +I+ +I G E +IF+++ G+RPNV ++M N + G
Sbjct: 443 IEGSNMDPDIQIY-TIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRG 501
Query: 209 MLDKYEKL 216
+LD+ KL
Sbjct: 502 LLDEANKL 509
>gi|242091740|ref|XP_002436360.1| hypothetical protein SORBIDRAFT_10g001070 [Sorghum bicolor]
gi|241914583|gb|EER87727.1| hypothetical protein SORBIDRAFT_10g001070 [Sorghum bicolor]
Length = 999
Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 10/183 (5%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+TV + L I + M+S G ++M T+ L+++ + G+LD+A E++
Sbjct: 713 VTVSILVTHLTKHGKLHSAISIYDRMISSGTSQSMQTFNLMISVFGKGGKLDKAVEMFAA 772
Query: 149 IFLDHLEGTP--RIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
G P + M+S+Y G H++ +F M+E G+RP + M NA+
Sbjct: 773 A---QELGLPIDEKMYTNMLSLYGKAGRHQEASLMFKRMKEDGIRPGKISFNSMINAYAT 829
Query: 207 LGMLDK----YEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSATEGKTNEVETTKNP 262
G+ + + +++ P + Y+ R AK E + A N T P
Sbjct: 830 SGLCSEAKSTFHEMQDCGHAPD-SFSYLALIRAYTEAKLYMEAEEAIRMMLNSSTTPSCP 888
Query: 263 NES 265
+ S
Sbjct: 889 HFS 891
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L EKD R+ ++ K M ++G T+GTY +L++ L+ + + E ++ ++ +L
Sbjct: 185 LDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNL 244
Query: 155 EGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYE 214
G F+ +I+ Y G + E+F + G+ PN + N F K+G ++ E
Sbjct: 245 SGDV-YFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAE 303
Query: 215 KL 216
L
Sbjct: 304 ML 305
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY L+N + G+++ AE L T + + + G +I F+ MI Y + M +K EI
Sbjct: 285 TYGALINGFCKIGQMEAAEMLVTDMQVRGV-GINQIVFNTMIDGYCRKNMVDKALEIKMI 343
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
ME++G+ +V + + ++ +D+ + L
Sbjct: 344 MEKMGIELDVYTYNTLACGLRRANRMDEAKNL 375
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
++T + +L K K ++ + +KG + +Y +LL+ A +GR + L+
Sbjct: 377 IVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFH 436
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+ + + F + +I+ + RGM ++ IF +M GV PNV + + A ++
Sbjct: 437 SMTDNGIVADSHCF-NILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRM 495
Query: 208 GML-DKYEKLKK 218
G L D EKL +
Sbjct: 496 GRLADAMEKLSQ 507
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 7/125 (5%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI-FF 162
WK ++Q+ + M ++G TY LLN L ++GR EA + + ++ P++ +
Sbjct: 285 WKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIK--PKVSTY 342
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKK 218
+I Y +G +M M E G+ P+ I ++ +A+ K GM+DK + K+++
Sbjct: 343 GILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQ 402
Query: 219 KYPPP 223
P
Sbjct: 403 HGLSP 407
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M+ KG + TY +L++ A G L E + + L IF + S Y G
Sbjct: 330 MIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIF-NIFFSAYAKCG 388
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYE 214
M +K +IF M + G+ PNV + +A KLG +D E
Sbjct: 389 MIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAE 429
>gi|242040057|ref|XP_002467423.1| hypothetical protein SORBIDRAFT_01g027765 [Sorghum bicolor]
gi|241921277|gb|EER94421.1| hypothetical protein SORBIDRAFT_01g027765 [Sorghum bicolor]
Length = 682
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Query: 87 PLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELW 146
L TV +LE+E +QVT ++ G + LL R+ +AE L+
Sbjct: 147 ALATVVSLCGSLEDEAAG---LQVTAHVVVSGLLTHVSVANSLLTMFGNLRRVQDAERLF 203
Query: 147 TKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVS 198
D +E RI ++ MIS+Y + ++ K F + +DM +GVRP+V+ +
Sbjct: 204 -----DRMEERDRISWNAMISMYSHEEVYSKCFMVLSDMRHVGVRPDVTTLC 250
>gi|224102411|ref|XP_002312667.1| predicted protein [Populus trichocarpa]
gi|222852487|gb|EEE90034.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 17/156 (10%)
Query: 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI 149
T+ KA ++ N + R ++ + M KG + T+ +L+ A +G D A++L
Sbjct: 330 TIIKAFCSISNNR---RAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKL---- 382
Query: 150 FLDHLEGT----PRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQ 205
LD + G RIF+ +I + G E IF DM E G+ P+V + + N F
Sbjct: 383 -LDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFC 441
Query: 206 K---LG-MLDKYEK-LKKKYPPPKWEYRYIKGKRVR 236
K +G ++ YE+ L++ P + Y+ I G VR
Sbjct: 442 KSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVR 477
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
M+ +G T+ TY LL++AL DGR EA EL ++ L P +F ++ +I+ +
Sbjct: 170 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL--APDVFTYNILINGHCKE 227
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
G +K EIF +M GVR V + + A K G + + +KL
Sbjct: 228 GNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKL 271
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
E + K+ +++ + M +G T+ TY L+ AL++ G++ E ++L+ + + +
Sbjct: 227 EGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIR-PDLV 285
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
++ +I+ + G ++ FEI +ME+ + P+ + + LG +D+ KL
Sbjct: 286 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 341
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT---PRI-FFD 163
I + M++ GQ + TY +LL+ L + LDEA L I EG+ P I +
Sbjct: 403 IALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTI-----EGSNMDPDIQIYT 457
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+I G E +IF+++ G+RPNV ++M N + G+LD+ KL
Sbjct: 458 IVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKL 510
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
M +G + TY L+N L+ +G+LDEA LW K+ L P I F+ +I+ + +
Sbjct: 299 MQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMV--GLGLKPNIVTFNALINGFCKK 356
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
M ++ ++F D+ E + PN + M +AF K GM++
Sbjct: 357 KMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMME 395
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L EKD R+ ++ K M ++G T+GTY +L++ L+ + + E ++ ++ +L
Sbjct: 109 LDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNL 168
Query: 155 EGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYE 214
G F+ +I+ Y G + E+F + G+ PN + N F K+G ++ E
Sbjct: 169 SGDV-YFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAE 227
Query: 215 KL 216
L
Sbjct: 228 ML 229
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY L+N + G+++ AE L T + + + G +I F+ MI Y + M +K EI
Sbjct: 209 TYGALINGFCKIGQMEAAEMLVTDMQVRGV-GINQIVFNTMIDGYCRKNMVDKALEIKMI 267
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
ME++G+ +V + + ++ +D+ + L
Sbjct: 268 MEKMGIELDVYTYNTLACGLRRANRMDEAKNL 299
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
Query: 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL 129
E +DS ++ ++ L+T LK L W + +V + M + G + ++ +L
Sbjct: 211 EAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNML 270
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEEL 188
+ G L+EA + ++ + TP + F +I ++ RG + E +M E
Sbjct: 271 IGGFCRAGELEEALRFYKEMRGRRV--TPDVVSFSCLIGLFTRRGEMDHAAEYLREMREF 328
Query: 189 GVRPNVSIVSMMGNAFQKLGML 210
G+ P+ I +M+ F + G++
Sbjct: 329 GLMPDGVIYTMVIGGFCRAGLM 350
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
++ L EK K + ML+ G T+ TY +L+ + +DG D A +++ + L
Sbjct: 551 IEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMV--SL 608
Query: 155 EGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGM 209
P + + + Y+++GM E++ ++ A M E G+ P++ +++ + + +LG+
Sbjct: 609 GYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGL 664
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168
+V M KG R +Y L++ L E GR++EA +L+ + D+ T R + + I
Sbjct: 250 EVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTY---TVLI 306
Query: 169 YYNRGMHEKM--FEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
Y G K+ +F +M+E G PNV +++ + K +D+ K+
Sbjct: 307 YALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKM 356
>gi|449444598|ref|XP_004140061.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Cucumis sativus]
Length = 1062
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGR-TMGTYFLLLNALAEDGRLDEAEELWT 147
+T ++ L+ +K W+++ V WM + R ++ Y ++L A + G++ AEE +
Sbjct: 154 LTFREMCIVLKEQKGWRQVRDVFDWMKLQLSYRPSVIVYTIVLRAYGQVGKIKLAEETFL 213
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
++ LE + M+ Y G H+ M ++ +++ G+ P +++ + M ++ QK
Sbjct: 214 EMLEVGLE-PDEVACGTMLCTYARWGHHKTMLSFYSAVKDRGIVPPIAVFNFMLSSLQKK 272
Query: 208 GMLDKYEKL 216
G+ K ++L
Sbjct: 273 GLHAKVKEL 281
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
ML++G TY ++++ L + RLD+A +L+ + TP F +I G
Sbjct: 851 MLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTP-CTFGPLIDGLLKSG 909
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
+ E+F M G RPN +I +++ N + KLG +D
Sbjct: 910 RLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVD 947
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 2/146 (1%)
Query: 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTY 126
N+K V G L+ + L + T ++ L + ++ K M G G + TY
Sbjct: 244 NIKT-VMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTY 302
Query: 127 FLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADME 186
+L++AL +LD+A L+TK+ ++ + ++ + + G +K+ +I+ +ME
Sbjct: 303 TVLIDALCTARKLDDAMCLFTKM-KSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEME 361
Query: 187 ELGVRPNVSIVSMMGNAFQKLGMLDK 212
G P+V +++ NA K G +++
Sbjct: 362 ADGYAPDVVTFTILVNALCKAGRINE 387
>gi|452821361|gb|EME28392.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 1088
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 122 TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEI 181
++ +Y ++ A G+LD+ +LW ++ + T ++F M + + G MFE
Sbjct: 301 SVTSYAIIFEAFGRLGKLDQMSQLWKQMLQRGHQPTEAVYFSAMYACAIH-GDLTSMFEY 359
Query: 182 FADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
F M E G+ PN+ + M+ +A K G L+
Sbjct: 360 FRKMVEDGIHPNIRMYGMIIDALGKAGKLE 389
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
++S+G T TY LL+ L +DG++++AE+L+ ++ LD+ R ++ +++ Y G
Sbjct: 872 LMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEM-LDYGCKPNRAIYNILLNGYRLAG 930
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
EK+ E+F +M + G+ P++ +++ A G L+
Sbjct: 931 NTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLN 968
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T L + D + +I++ M + G + Y +++AL + GR+DEA +++ +
Sbjct: 322 VTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQ 381
Query: 149 IFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPN----VSIVSMMGNA 203
+ +E P+ + ++ +IS + E+F M G PN V ++ G +
Sbjct: 382 MKQKGIE--PQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKS 439
Query: 204 FQKLGMLDKYEKLKKKYPPPKWE------YRYIKGKRVRIPAKPKYELDSATEGKTNEVE 257
+ L + +YE +K K P Y K R+ + + +EL S N
Sbjct: 440 GESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITY 499
Query: 258 T--TKNPNESSEEPEAAANLNESLE 280
T K +++S EA +E +E
Sbjct: 500 TMMIKCCSKASNADEAMKVFSEMIE 524
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Query: 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI 149
T ++ L EK K + ML+ G T+ TY +L+ + +DG D A +++ +
Sbjct: 546 TYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM 605
Query: 150 FLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
L P + + + Y+++GM E++ ++ A M E G+ P++ +++ + + +LG
Sbjct: 606 V--SLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLG 663
Query: 209 M 209
+
Sbjct: 664 L 664
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168
+V M KG R +Y L++ L E GR++EA +L+ + D+ T R + + I
Sbjct: 250 EVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTY---TVLI 306
Query: 169 YYNRGMHEKM--FEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
Y G K+ +F +M+E G PNV +++ + K +D+ K+
Sbjct: 307 YALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKM 356
>gi|302776386|ref|XP_002971363.1| hypothetical protein SELMODRAFT_451140 [Selaginella moellendorffii]
gi|300161345|gb|EFJ27961.1| hypothetical protein SELMODRAFT_451140 [Selaginella moellendorffii]
Length = 745
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI 149
T + L + + R + + + ML G TY +L+ +L +G++D AE L K+
Sbjct: 574 TYTTVIDMLVKMRHFDRAMAIYQEMLDAGCKPDAHTYTVLIQSLGREGKIDAAEHLLEKM 633
Query: 150 FLDHLEGTPRIF-FDKMIS--IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
L+ + P + + +I+ I+Y R H +F M++ GV PN S+M ++
Sbjct: 634 PLNGCK--PNVVNYTSLINSLIHYGRVSHA--LAVFKRMQDEGVMPNSITYSLMSKGLKR 689
Query: 207 LGMLDKYEKLKKK 219
ML +++KK
Sbjct: 690 ANMLHDLVEVEKK 702
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF- 161
D ++ + + + M + G ++ TY LLL L ++DEAEEL + L P +
Sbjct: 524 DTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLR--PDVVS 581
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
++ +IS N+G +K E+ +M + G+RP + + +A G + E L ++
Sbjct: 582 YNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQ 639
>gi|449479000|ref|XP_004155477.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 493
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 109 QVTKWMLSKGQG-RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167
Q K+ S G+ R Y LL+ E+ L +AE + K+ TP + ++ M++
Sbjct: 122 QAEKYFSSIGESSRDHKVYGALLHCYVENKNLKKAEAIMQKMREVGFMKTP-LSYNAMLN 180
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+Y + G HEK+ E+ +MEE+G+ P+ ++ NA+ + EKL K
Sbjct: 181 LYAHLGKHEKLAELLKEMEEMGIGPDRFTYNIRMNAYAAASDITNMEKLLSK 232
>gi|242064536|ref|XP_002453557.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
gi|241933388|gb|EES06533.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
Length = 390
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 19 KISRNARSLVVCAARGPRPRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDS 78
++ R L +C+ R Y + KA + G S+ A V C S+ K G D+
Sbjct: 95 QLHRLNEILDICSGHLNRSVYSYLVKALCKSGHASE-AHSVFCRMWSSHEK----GDRDA 149
Query: 79 FIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGR 138
F++ L+ L N + I + M KG +G Y ++ +AL + +
Sbjct: 150 FVSM------------LEALCNAEKTAEAIDLLHMMPEKGITTDVGMYNIIFSALGKLKQ 197
Query: 139 LDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIV 197
+ L+ K+ + + P +F ++ MIS + G+ +K E+F +M++ +P+V
Sbjct: 198 VSFMSSLYDKMKANGV--APDVFTYNIMISSFGRVGLVDKASELFEEMDDSSCKPDVITY 255
Query: 198 SMMGNAFQKLGMLDKYEKL-----KKKYPPPKWEY 227
+ M N K G LD+ L +K Y P + Y
Sbjct: 256 NSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTY 290
>gi|356495758|ref|XP_003516740.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 554
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 110 VTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP--RIFFDKMIS 167
V K M G R+ TY + L+ GRL E+ W+ I + +G P + K++
Sbjct: 173 VLKEMDYSGIWRSKETYQIFLDYYVGAGRL---EDTWSTINVMKQKGFPLNSFVYSKVVG 229
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
IY + GM +K E+ ++ E G+ + I + + + F K G LD+ KL KK
Sbjct: 230 IYRDNGMWKKAIEVLEEIRERGISLDTHICNSIIDTFGKYGELDEALKLFKK 281
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 12/136 (8%)
Query: 86 FPL--ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAE 143
FPL K + + WK+ I+V + + +G +++ + G LDEA
Sbjct: 217 FPLNSFVYSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTHICNSIIDTFGKYGELDEAL 276
Query: 144 ELWTKIFLDHLEGT-PRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPN----VSIV 197
+L+ K+ EG P I ++ +I + G K F +F DM+E G+ P+ V+I+
Sbjct: 277 KLFKKM---QKEGVRPNIVTWNSLIKWHCKEGDFMKSFHLFTDMQEQGLYPDPKIFVTII 333
Query: 198 SMMGNAFQKLGMLDKY 213
S MG K G++ KY
Sbjct: 334 SCMGEQ-GKWGIIKKY 348
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
+ + + W I + + M +G Y +L++ + G+ A E + + +
Sbjct: 333 ISCMGEQGKWGIIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGKFQNARECVQALKSEGV 392
Query: 155 EGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+P IF + + Y +G+ E++ + ME G+ PN+ +++M+ NAF G
Sbjct: 393 LVSPSIFC-VLANAYAQQGLCEQVIMVLQIMEAEGIEPNIVMLNMLINAFGNAG 445
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY +L++ L ++GR++EA L ++ LE + + +IS + ++G ++ +F +
Sbjct: 47 TYCILMDGLCKEGRVEEAMRLLGEMKRKGLE-VDVVVYSTLISGFCSKGCLDRGKALFDE 105
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGM 209
M E G+ PNV + S + N F K G+
Sbjct: 106 MLEKGISPNVVVYSCLINGFCKKGL 130
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMIS 167
++ + ML KG+ + +Y L+ L +G+LDEA +L++ + D P + F+ +I
Sbjct: 206 KIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQ 265
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
G +K EI+ M E G N+ ++ + K G++DK +L K+
Sbjct: 266 GLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKR 317
>gi|302818178|ref|XP_002990763.1| hypothetical protein SELMODRAFT_132289 [Selaginella moellendorffii]
gi|300141501|gb|EFJ08212.1| hypothetical protein SELMODRAFT_132289 [Selaginella moellendorffii]
Length = 661
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
IT+ L D +R QV W L Q R+ +N A+ GR+ A E++
Sbjct: 439 ITLISVLDACAGAGDARRGSQVHGWSLQL-QLRSAALDNAAVNMYAKSGRVAAAREVFEA 497
Query: 149 IFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN-VSIVSMMGNAFQKL 207
+D T + + M++ Y G E+ F +F M+ GVRPN V+++S++G A
Sbjct: 498 --MDSQRRTI-MSWSAMVAAYAGVGHAEEAFRLFHAMQREGVRPNHVTLISILG-ACSHA 553
Query: 208 GML 210
GML
Sbjct: 554 GML 556
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T L + + ++V K M + G ++ TY L++A A DG LDEA EL ++
Sbjct: 327 VTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQ 386
Query: 149 IFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNV----SIVSMMGNA 203
+ ++ P +F + ++S + G + ++F +M G +PN+ +++ M GN
Sbjct: 387 MVKKGIK--PDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNR 444
Query: 204 FQKLGMLDKYEKLK 217
+ M+ +E++K
Sbjct: 445 GNFVEMMKVFEEIK 458
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T L + + ++V K M + G ++ TY L++A A DG LDEA EL ++
Sbjct: 327 VTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQ 386
Query: 149 IFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNV----SIVSMMGNA 203
+ ++ P +F + ++S + G + ++F +M G +PN+ +++ M GN
Sbjct: 387 MVKKGIK--PDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNR 444
Query: 204 FQKLGMLDKYEKLK 217
+ M+ +E++K
Sbjct: 445 GNFVEMMKVFEEIK 458
>gi|356545987|ref|XP_003541414.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 613
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 107 IIQVTKWMLSKGQGRT-MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKM 165
++V + ++ G G++ + + L++A A G ++ A L+ D + + + M
Sbjct: 233 CLEVAERVVRNGNGKSGVAAWTSLVSAYALRGEVEVARRLF-----DQMGERDVVSWTAM 287
Query: 166 ISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKW 225
IS Y + G ++ E+F ++E+LG+ P+ +V +A +LG L+ ++ KY W
Sbjct: 288 ISGYCHAGCFQEALELFVELEDLGMEPDEVVVVAALSACARLGALELGRRIHHKYDRDSW 347
Query: 226 EYRYIKG 232
+ + +G
Sbjct: 348 QCGHNRG 354
>gi|414876958|tpg|DAA54089.1| TPA: hypothetical protein ZEAMMB73_851506 [Zea mays]
gi|414876959|tpg|DAA54090.1| TPA: hypothetical protein ZEAMMB73_851506 [Zea mays]
Length = 1090
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 122 TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEI 181
T+ TY +L+ AL +G LD+A++L+ K+ ++ T R+ ++ +IS + N G+ K E+
Sbjct: 791 TIITYTILIGALCREGLLDDADQLFQKMSTKGIKPTTRV-YNLLISGHCNFGLTGKALEL 849
Query: 182 FADMEELGVRPN 193
+ MEEL + P+
Sbjct: 850 MSHMEELFILPD 861
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMI 166
++V + M S G + TY L+NA A +G ++AEE++ + + P ++ ++ ++
Sbjct: 297 LRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEE--MQQAGHEPDVYAYNALM 354
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYE 214
Y G+ + EIF+ ME +G P+ + +++ +AF + G+ + E
Sbjct: 355 EAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAE 402
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 117 KGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMH 175
+G TM ++ LLL+A A G + EE+ ++ L P F + M++ Y G
Sbjct: 411 QGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLR--PDTFALNAMLNAYGRAGRL 468
Query: 176 EKMFEIFADMEE----LGVRPNVSIVSMMGNAFQKLGMLDKYE 214
+ M +FA ME P+ S +++ NA+ + G LD+ E
Sbjct: 469 DDMERLFAAMERGDGASAGAPDTSTYNVLVNAYGRAGYLDRME 511
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 2/132 (1%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
++T L +L K + M +KG + +Y LL+ A +G + L+
Sbjct: 370 IVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFN 429
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+ + + +F +I Y RGM + IF +M++ GV P+V S + + F ++
Sbjct: 430 SMKSNGIAANCHVF-TILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRM 488
Query: 208 GML-DKYEKLKK 218
G L D EK +
Sbjct: 489 GRLTDAMEKFNQ 500
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 114 MLSKGQGRTMGTYFL-LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNR 172
M++KG R +F ++N+L +DGR+ +A +++ + D E I F+ +I Y
Sbjct: 536 MINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIF-DLATDIGERPGVITFNSLIDGYCLV 594
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKKKYPPP 223
G +K F+I ME +GV P++ + + + + K G ++ + ++++K P
Sbjct: 595 GKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKP 649
>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
Length = 633
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 19 KISRNARSLVVCAARGPRPRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDS 78
++ R L +C+ RP Y + KA + G S+ A V C S+ K + Y +
Sbjct: 338 QLHRLNEILDICSGCLNRPVYSYLIKALCKSGHASE-AHSVFCRMWNSHEKGDRY----A 392
Query: 79 FIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGR 138
F++ L+ L N + I + M KG +G Y ++ +AL + +
Sbjct: 393 FVSM------------LEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSALGKLKQ 440
Query: 139 LDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIV 197
+ L+ + + + P +F ++ MIS + G+ +K E+F +ME+ +P+V
Sbjct: 441 VSFMSSLYDTMRANGV--VPDVFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTY 498
Query: 198 SMMGNAFQKLGMLDKYEKL-----KKKYPPPKWEY 227
+ M N K G LD+ L +K Y P + Y
Sbjct: 499 NSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTY 533
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 64/158 (40%), Gaps = 34/158 (21%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
++T L+ + + + V M +KG + TY +++N + +GR+D+A+E+
Sbjct: 187 VVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILN 246
Query: 148 KI--------------FLDHLEGTPR--------------------IFFDKMISIYYNRG 173
++ L L R + FD ++ + G
Sbjct: 247 RLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGG 306
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
M E+ ++ M + G PN ++ +++ NA K G +D
Sbjct: 307 MVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVD 344
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMI 166
++V + M S G + TY L+NA A +G ++AEE++ + + P ++ ++ ++
Sbjct: 297 LRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEE--MQQAGHEPDVYAYNALM 354
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYE 214
Y G+ + EIF+ ME +G P+ + +++ +AF + G+ + E
Sbjct: 355 EAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAE 402
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 117 KGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMH 175
+G TM ++ LLL+A A G + EE+ ++ L P F + M++ Y G
Sbjct: 411 QGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLR--PDTFALNAMLNAYGRAGRL 468
Query: 176 EKMFEIFADMEE----LGVRPNVSIVSMMGNAFQKLGMLDKYE 214
+ M +FA ME + P+ S ++M NA+ + G LD+ E
Sbjct: 469 DDMERLFAAMERGDGAIAGAPDTSTYNVMVNAYGRAGYLDRME 511
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 62/125 (49%), Gaps = 7/125 (5%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI-FF 162
WK ++Q+ + M + G Y +LL+ L ++GR EA ++ + ++ P + +
Sbjct: 253 WKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIK--PHVTIY 310
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKK 218
++ Y G +M M GV P+ I ++M NA+ K M+D+ ++K+++
Sbjct: 311 GILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQ 370
Query: 219 KYPPP 223
++ P
Sbjct: 371 QWLSP 375
>gi|302809912|ref|XP_002986648.1| hypothetical protein SELMODRAFT_41458 [Selaginella moellendorffii]
gi|300145536|gb|EFJ12211.1| hypothetical protein SELMODRAFT_41458 [Selaginella moellendorffii]
Length = 623
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 10/125 (8%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
IT+ L D +R QV W L Q R+ +N A+ GR+ A E++
Sbjct: 409 ITLISVLDACAGAGDARRGSQVHGWSLQL-QLRSAALDNAAVNMYAKSGRVAAAREVF-- 465
Query: 149 IFLDHLEGTPRIFFD--KMISIYYNRGMHEKMFEIFADMEELGVRPN-VSIVSMMGNAFQ 205
+ ++ R M++ Y G E+ F +F M+ GVRPN V+++S++G A
Sbjct: 466 ---EAMDAQRRTIMSWSAMVAAYAGVGHAEEAFRLFHAMQREGVRPNHVTLISILG-ACS 521
Query: 206 KLGML 210
GML
Sbjct: 522 HAGML 526
>gi|326495786|dbj|BAJ85989.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 75/167 (44%), Gaps = 16/167 (9%)
Query: 85 EFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMG--TYFLLLNALAEDGRLDEA 142
PL ++ L EK V + + + G G T+ Y LL A+ G
Sbjct: 73 HLPLQVYTSVIRGLGKEKRLDAAFAVVEHLKASGDGSTLNQFVYNCLLGAVKNSGEFGRI 132
Query: 143 EELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMG 201
+++ + + +P I F+ ++S+Y +G E++ ++ D+E G+ P + S +
Sbjct: 133 QDVLADMEAQGI--SPNIVTFNTLMSVYVEQGKIEEVLRVYDDIEGRGLVPTAATYSTVM 190
Query: 202 NAFQKLG----MLDKYEKLKKKY-------PPPKWEYRYIKGKRVRI 237
+A++ G L + KL++++ P WE ++K +++ +
Sbjct: 191 SAYKSAGDGFAALKFFVKLRERHKNGELAGSPADWEQEFVKYEKLAV 237
>gi|357130244|ref|XP_003566760.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Brachypodium distachyon]
Length = 579
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 79/179 (44%), Gaps = 14/179 (7%)
Query: 43 WKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEK 102
+ R I + K KL+TC+ +S +++ YG + PL + + L +
Sbjct: 355 FALRAVIESHVKVGKLLTCLNLVSPLRK--YGVV---------IPLESYNCLIGALCEDM 403
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF- 161
+ KWM+ G ++ Y ++L+ L + +D+A L K+ + E P
Sbjct: 404 RPHAARGLFKWMVEDGHSPSLEMYNMILDCLCQCDSVDDA--LDVKVEMSSREVRPDFHT 461
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
+ +++ G + A+M E G++PN +I + + F K G LD+ E + K +
Sbjct: 462 YQALVTCLCRLGKSLDGKSVMAEMIESGLQPNEAICTALVCGFCKEGYLDRAELILKAF 520
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
T +LLNAL ++G +++AEE+ K FL++ +FF+ +++ Y G K +
Sbjct: 359 TCSILLNALCKEGNMEKAEEVLKK-FLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEK 417
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
ME +G+RPN + + F ++ +++ EK KK
Sbjct: 418 MEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKK 452
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 122 TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEI 181
T+ TY +L+N L + G++ EAE L ++I L I ++ +IS Y + G +K E+
Sbjct: 566 TLVTYNILINGLCKKGKVMEAENLASEITRKGLS-FDVITYNSLISGYSSAGNVQKALEL 624
Query: 182 FADMEELGVRPNVS 195
+ M++ G++P ++
Sbjct: 625 YETMKKSGIKPTLN 638
>gi|440804730|gb|ELR25603.1| pentatricopeptide repeat domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 642
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 88 LIT-VKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELW 146
LIT + A + E E+ + R+ Q+ G + + L+NAL GR+D+AE +
Sbjct: 179 LITALGGAGRADEAERYFARMTQL-------GLAPNLHCFSALINALGNAGRVDDAERCF 231
Query: 147 TKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQ 205
+D L P F +I+ G + FA ME+LGV P++ S + +A
Sbjct: 232 DA--MDQLGVVPDAHCFSTLIAALGTAGRVAEAERHFAKMEKLGVVPDLHCFSTLMSALT 289
Query: 206 KLGMLDKYEKL 216
K G +D + +
Sbjct: 290 KAGKVDAAQHV 300
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY LL+ L ++G++ EA LW K+ LD ++ ++ MI + +G + +F+D
Sbjct: 455 TYNSLLSWLCKEGKMSEATTLWQKM-LDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSD 513
Query: 185 MEELGVRPNVSIVSMMGNAFQKLG 208
M + G++PNV S++ + + K G
Sbjct: 514 MLDCGLKPNVITYSILMDGYFKNG 537
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 8/143 (5%)
Query: 100 NEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR 159
N + + + + K ML +G + TY L++ L ++GRL A +L++++ + P
Sbjct: 710 NLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGI--IPD 767
Query: 160 IF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKY----- 213
I + +I+ +G E +I A+ME + PNV I + + K G L +
Sbjct: 768 IIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHN 827
Query: 214 EKLKKKYPPPKWEYRYIKGKRVR 236
E L K P Y + +++
Sbjct: 828 EMLDKGLTPNDTTYDILINGKIK 850
>gi|55295905|dbj|BAD67773.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 1013
Score = 47.0 bits (110), Expect = 0.012, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 66/135 (48%), Gaps = 7/135 (5%)
Query: 83 ELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEA 142
E E + +K++ + + M+S G R+M T+ ++++ + G+L++A
Sbjct: 711 EAELDTVVYNTFIKSMLESGKLYSAVSIYDRMISSGIPRSMQTFNIMISVYGQGGKLEKA 770
Query: 143 EELWT---KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSM 199
E+++ ++ L E T + M+S Y G H + +F+ M+E G+RP +
Sbjct: 771 VEMFSAAQELGLPIDEKT----YTNMLSFYGKAGKHHEASLLFSRMKEDGIRPGKISFNT 826
Query: 200 MGNAFQKLGMLDKYE 214
M NA+ G+ ++ E
Sbjct: 827 MINAYATSGLHNEAE 841
>gi|218197431|gb|EEC79858.1| hypothetical protein OsI_21342 [Oryza sativa Indica Group]
Length = 1013
Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 66/135 (48%), Gaps = 7/135 (5%)
Query: 83 ELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEA 142
E E + +K++ + + M+S G R+M T+ ++++ + G+L++A
Sbjct: 711 EAELDTVVYNTFIKSMLESGKLYSAVSIYDRMISSGIPRSMQTFNIMISVYGQGGKLEKA 770
Query: 143 EELWT---KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSM 199
E+++ ++ L E T + M+S Y G H + +F+ M+E G+RP +
Sbjct: 771 VEMFSAAQELGLPIDEKT----YTNMLSFYGKAGKHHEASLLFSRMKEDGIRPGKISFNT 826
Query: 200 MGNAFQKLGMLDKYE 214
M NA+ G+ ++ E
Sbjct: 827 MINAYATSGLHNEAE 841
>gi|326503836|dbj|BAK02704.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 64/121 (52%), Gaps = 7/121 (5%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMI 166
++V K M S G + TY L+NA A +G ++AEE++ + + P ++ ++ ++
Sbjct: 104 MKVFKEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEE--MQQAGHEPDVYAYNALM 161
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKKKYPP 222
Y G + EIF+ M+ +G P+ + +++ +A+ + G+ + +E LK++
Sbjct: 162 EAYSRAGFPQAASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEAVFESLKRQGMA 221
Query: 223 P 223
P
Sbjct: 222 P 222
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 117 KGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHE 176
+G TM ++ LLL A A G + EE+ ++ L I + M++ Y G +
Sbjct: 218 QGMAPTMKSHMLLLAAHARSGNVARCEEVMAQLHKSGL-APDTIALNAMLNAYGRAGRLD 276
Query: 177 KMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYE 214
M + A ME G R +V ++ NA+ + G L++ E
Sbjct: 277 DMERLLAAMERRGTR-DVGTYNVAVNAYGRAGYLERME 313
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 12/173 (6%)
Query: 58 LVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSK 117
L+TC + ++ EE + +T L + K ++V + M
Sbjct: 110 LITCCR-RGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVN 168
Query: 118 GQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI---FFDKMISIYYNRGM 174
G ++ TY L++A A DG L EA EL ++ +EG + + ++S + G
Sbjct: 169 GCSPSIVTYNSLISAYARDGLLKEAMELKNQM----VEGGINLDVFTYTTLLSGFVRAGK 224
Query: 175 HEKMFEIFADMEELGVRPNV----SIVSMMGNAFQKLGMLDKYEKLKKKYPPP 223
E +FA+M G +PN+ +++ M GN + M+ +E++K P
Sbjct: 225 DESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVP 277
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 10/165 (6%)
Query: 58 LVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSK 117
L+TC K S + +E + A +T L K ++V M
Sbjct: 285 LITCCKRGS-LHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELN 343
Query: 118 GQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT-PRIF-FDKMISIYYNRGMH 175
G ++ TY L++A A DG LDEA EL ++ +GT P +F + ++S + G
Sbjct: 344 GFSPSIVTYNSLISAYARDGMLDEAMELKNQM---AEKGTKPDVFTYTTLLSGFERAGKV 400
Query: 176 EKMFEIFADMEELGVRPNV----SIVSMMGNAFQKLGMLDKYEKL 216
E IF +M G +PN+ + + M GN + + M+ ++++
Sbjct: 401 ESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEI 445
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 53/117 (45%), Gaps = 4/117 (3%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTM---GTYFLLLNALAEDGRLDEAEELWTKIFL 151
LK L K + + W + + ++M ++++ L ++GR+ A L+ +
Sbjct: 142 LKGLGFHKKFDLALCAFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAANLFNGLQE 201
Query: 152 DHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
D + +IS + N G + + +F MEE G +P + +++ N F K+G
Sbjct: 202 DGFS-LDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMG 257
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY +L+A A DGR++E E + + D + I ++ MI +Y GMH K E++
Sbjct: 268 TYNSVLHAFARDGRIEEVERI-RGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQ 326
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDK 212
M+E G P+ +++ + K G +++
Sbjct: 327 MKEEGRCPDSVTFTVLIDTLGKAGFVNE 354
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLD--EAEELWTKIFLDHLEGTPRIFFDKMISIYYN 171
M+ G + TY L++A GRL E EL K + ++ MI++Y
Sbjct: 882 MIKTGNAPNISTYTTLISAY---GRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRK 938
Query: 172 RGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYP 221
G H K+ EI M+ G P+++ + M+ +++ K G K E++ + P
Sbjct: 939 AGEHRKIEEIIEQMKVDGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLP 988
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY +L+A A DGR++E E + + D + I ++ MI +Y GMH K E++
Sbjct: 257 TYNSVLHAFARDGRIEEVERI-RGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQ 315
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDK 212
M+E G P+ +++ + K G +++
Sbjct: 316 MKEEGRCPDSVTFTVLIDTLGKAGFVNE 343
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLD--EAEELWTKIFLDHLEGTPRIFFDKMISIYYN 171
M+ G + TY L++A GRL E EL K + ++ MI++Y
Sbjct: 871 MIKTGNAPNISTYTTLISAY---GRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRK 927
Query: 172 RGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYP 221
G H K+ E+ M+ G P+++ + M+ +++ K G K E++ + P
Sbjct: 928 AGEHRKIEEVIEQMKADGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLP 977
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY +++ A+ GRLDEA L+ ++ + G R+ ++ ++SIY G E+ + +
Sbjct: 363 TYSTVIDGYAKAGRLDEALNLFNEMKFASI-GLDRVSYNTLLSIYAKLGRFEEALNVCKE 421
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWE 226
ME G++ + + + + K G KYE++K+ + K E
Sbjct: 422 MESSGIKKDAVTYNALLGGYGKQG---KYEEVKRVFEEMKAE 460
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Query: 58 LVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSK 117
L++C + N+ EE G L +T L + K ++V + M
Sbjct: 277 LISCCR-RGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGN 335
Query: 118 GQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHE 176
G ++ TY L++A A DG L++A EL ++ ++ P +F + ++S + G +
Sbjct: 336 GCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIK--PDVFTYTTLLSGFEKAGKDK 393
Query: 177 KMFEIFADMEELGVRPNV----SIVSMMGNAFQKLGMLDKYEKLKKKYPPP 223
+IF +M G +PN+ +++ M GN + M+ +E +K P
Sbjct: 394 AAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSP 444
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 128 LLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEE 187
++++ L + GR+ A L + D + + MI+ + + G + + +F MEE
Sbjct: 170 VIISILGKGGRVSAAASLLHNLCKDGFD-VDVYAYTSMITAFTSNGRYREAVMVFKKMEE 228
Query: 188 LGVRPNVSIVSMMGNAFQKLGM 209
+G +P + +++ N + K+GM
Sbjct: 229 VGCKPTLITYNVILNVYGKMGM 250
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T L+ L + + + ++ M+ GQ + TY ++LN L + +DEA +++
Sbjct: 655 VTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQS 714
Query: 149 IFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNV-SIVSMMGNAFQK 206
+ L P I F MI + + G + ++FA + G+ PNV + MM N Q+
Sbjct: 715 LCSKDLR--PNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQE 772
Query: 207 LGMLDKYEKL 216
G+LD+++ L
Sbjct: 773 -GLLDEFDNL 781
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 60 TCIKGLSNVK--EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSK 117
T I GL + + G L I +++ + T + + +WK +++ + M ++
Sbjct: 309 TIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYAR 368
Query: 118 GQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEK 177
G + TY LLL+ L ++G+ EA +++ + ++ I + ++ Y RG
Sbjct: 369 GLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTI-YGILLHGYAARGAIAD 427
Query: 178 MFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ ++ M G+ PN I +++ A+ K M+D+
Sbjct: 428 LTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDE 462
>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
Length = 617
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 8/180 (4%)
Query: 47 KRIGTISKSAKLVTCIKGLSN---VKEEVYGALDSFIAWELEFPLITVKKALKTLENEKD 103
+ IG +S + I L V E L+ F+A E++ LK
Sbjct: 255 QAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIAS 314
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163
K QV M G TY LL++A GR + A L ++ D ++ + +F
Sbjct: 315 LKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVF-S 373
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML----DKYEKLKKK 219
++++ + +RG +K F + +M+ GVRP+ ++M + F K L D + K++++
Sbjct: 374 RILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREE 433
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 26 SLVVCAARGPRPRYP-RVWKARKRIGT----ISKSAKLVTCIKGLSNVKEEVYGALDSFI 80
++V R R R +V++A K+ G I+ + + C KG ++K+ ALD F
Sbjct: 239 AMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKK----ALDIFE 294
Query: 81 AWE---LEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDG 137
+ +E IT + W+ +V M +G + + TY L++A+ + G
Sbjct: 295 EMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGG 354
Query: 138 RLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSI 196
+++ A + + + L ++ +P + + MI Y G E+ ++ DM+E GVRP+
Sbjct: 355 QMELAASIMSSMRLKNI--SPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVS 412
Query: 197 VSMMGNAFQKLGMLD 211
+ + + + KLG D
Sbjct: 413 YNTLIDIYAKLGRFD 427
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 73/146 (50%), Gaps = 13/146 (8%)
Query: 85 EFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYF--LLLNALAEDGRLDEA 142
+FP + L+ L N +W+R +Q +WM+ +G R+ + ++++ L G+++ A
Sbjct: 164 DFPYL-----LRELGNRGEWERALQGYEWMVQQGHLRSEWSKLASIMISTLGRLGKVEIA 218
Query: 143 EELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGN 202
+++ + G + M+S Y G + ++F M++ G +PN+ + + +
Sbjct: 219 LDVFNRAQKAGF-GNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIID 277
Query: 203 AFQKLGM-----LDKYEKLKKKYPPP 223
A K G+ LD +E+++K+ P
Sbjct: 278 ACGKGGVDLKKALDIFEEMQKEGVEP 303
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
TY L++A + G+ +A L+ K+ + L P + + +I Y GMH+ IF
Sbjct: 447 TYNALIDAYGKQGKYKDAAGLFDKMKAEGL--VPNVLTYSALIDAYSKAGMHQDATSIFV 504
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLD 211
+ + G++P+V + S + ++ K G+++
Sbjct: 505 EFKRAGLKPDVVLYSSLIDSCCKCGLVE 532
>gi|297607417|ref|NP_001059918.2| Os07g0545900 [Oryza sativa Japonica Group]
gi|255677866|dbj|BAF21832.2| Os07g0545900, partial [Oryza sativa Japonica Group]
Length = 63
Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRI 237
I+ADMEELGV P+ +G AF LG DK + + +KY K++Y + G+RVR+
Sbjct: 1 IYADMEELGVHPDEDTTRRIGRAFVTLGQEDKEKIVLEKY-LKKYKYMHFNGERVRV 56
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
M+SKG + TY LL+A + G++++A E++ ++ + TP F F+ +I ++
Sbjct: 284 MVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNC--TPNSFTFNALIGMHGKN 341
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+M IF DM+ GV P++ + + AF K GM + K+
Sbjct: 342 KNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKV 385
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP-RI 160
+ W+ I+++ + M ++G TY + A A +EA EL+T+ + TP R+
Sbjct: 167 RSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQ--MKSSNCTPDRV 224
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLK 217
++ ++ +Y G + + + +ME G PN+ + + +AF + G+ + ++K
Sbjct: 225 TYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMK 281
>gi|115465970|ref|NP_001056584.1| Os06g0111300 [Oryza sativa Japonica Group]
gi|113594624|dbj|BAF18498.1| Os06g0111300 [Oryza sativa Japonica Group]
Length = 978
Score = 46.2 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT- 147
+T+ + L + + + M+S G R+M T+ ++++ + G+L++A E+++
Sbjct: 682 VTISILVTHLTKQGKLYSAVSIYDRMISSGIPRSMQTFNIMISVYGQGGKLEKAVEMFSA 741
Query: 148 --KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQ 205
++ L E T + M+S Y G H + +F+ M+E G+RP + M NA+
Sbjct: 742 AQELGLPIDEKT----YTNMLSFYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYA 797
Query: 206 KLGMLDKYE 214
G+ ++ E
Sbjct: 798 TSGLHNEAE 806
>gi|302761606|ref|XP_002964225.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
gi|300167954|gb|EFJ34558.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
Length = 580
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 85/192 (44%), Gaps = 10/192 (5%)
Query: 24 ARSLVVCAARGPR-PRYPRVWKARKRIGTISKSAKLVTCIKG-LSNVK--EEVYGALDSF 79
A LVVC A G R ++ + G A + I G L+ ++ ++V+ ++
Sbjct: 69 ALDLVVCYANGAMVDRAQAIFNELRHQGQ-EFPAHIYNVIFGALAKLQRFQDVFRMVEDL 127
Query: 80 IAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGT--YFLLLNALAEDG 137
+A F T ++ + ++ KWM SKG M T Y L+ L +
Sbjct: 128 MAKNFTFSDSTADALVRIFCKALAVDKAVRFLKWMSSKGLQVAMSTFEYNCLIEGLCKGD 187
Query: 138 RLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSI 196
R+DEA L+ + +++ IF ++ MI GM E+ ++ MEE +P+ I
Sbjct: 188 RIDEALRLYELMRGNNVPAD--IFTYNNMIECISKLGMVEQAEKVLKTMEESDCKPDKFI 245
Query: 197 VSMMGNAFQKLG 208
+ + N F KLG
Sbjct: 246 YTRVINGFCKLG 257
>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 1000
Score = 46.2 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI 149
TV +LENE +QV ++ G + L+ GR+ +AE+L+
Sbjct: 150 TVVSLCGSLENEVPG---LQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLF--- 203
Query: 150 FLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN-VSIVSMM 200
D +E I ++ MIS+Y ++G+ K F +F+DM G+RP+ ++ S+M
Sbjct: 204 --DRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLM 253
>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
Length = 1215
Score = 46.2 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI 149
TV +LENE +QV ++ G + L+ GR+ +AE+L+
Sbjct: 452 TVVSLCGSLENEVPG---LQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLF--- 505
Query: 150 FLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN-VSIVSMM 200
D +E I ++ MIS+Y ++G+ K F +F+DM G+RP+ ++ S+M
Sbjct: 506 --DRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLM 555
>gi|302819768|ref|XP_002991553.1| hypothetical protein SELMODRAFT_133828 [Selaginella moellendorffii]
gi|300140586|gb|EFJ07307.1| hypothetical protein SELMODRAFT_133828 [Selaginella moellendorffii]
Length = 414
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 18/146 (12%)
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
+ + ++ +L A+ GR +E LW ++ + + I F +++ GM E+
Sbjct: 264 KCLVSWAAMLGGYAQSGRAEEGITLWRRLGQEGI-APNEIAFTSALALCGGAGMIEEAAR 322
Query: 181 IFADM-EELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPP-------------KWE 226
+F M + GVRP+ S M +A + G L++ E+L P P W
Sbjct: 323 VFQSMAADHGVRPSREHYSAMVDALARAGHLEEAEELLASMPFPVNPVTTTSILSACNWH 382
Query: 227 YRYIKGKRVRIPAKPKYELDSATEGK 252
+ +G+R A+ E+DS+ G
Sbjct: 383 RDWTRGERA---ARGLLEIDSSHSGH 405
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP-RIFFDKMISIYYNRGMHEKMFEIFA 183
TY ++ A ++ EA L+ + + P R+ ++ ++ +Y GMH++ E+
Sbjct: 286 TYNTMITACIQNSHCQEALRLFQE--MKEAGCCPNRVTYNALLDVYGKGGMHKEASELLV 343
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
+ME G+ PN+ + + A+ + G+ D+ LKK
Sbjct: 344 EMEAAGISPNIVTYNELIAAYARAGLCDEAAALKK 378
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY +++ A+ GRLDEA L+ ++ + G R+ ++ ++SIY G E+ + +
Sbjct: 249 TYSTVIDGYAKAGRLDEALNLFNEMKFASI-GLDRVSYNTLLSIYAKLGRFEEALNVCKE 307
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWE 226
ME G++ + + + + K G KYE++K+ + K E
Sbjct: 308 MESSGIKKDAVTYNALLGGYGKQG---KYEEVKRVFEEMKAE 346
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 3/172 (1%)
Query: 47 KRIGTISKSAKLVTCIKGLSNVKE--EVYGALDSFIAWELEFPLITVKKALKTLENEKDW 104
+R G + T I GL E E L +A L+ +T +
Sbjct: 391 QRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKM 450
Query: 105 KRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDK 164
QV M+ +G + TY L + L + G + A EL ++ LE ++
Sbjct: 451 AEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNA-CTYNS 509
Query: 165 MISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+I+ G ++ ADM+ G++P+V + + +A K G LD+ L
Sbjct: 510 LINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDL 561
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Query: 107 IIQVTKW---MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163
++ +W M KG TY L+N L G L EAE++ ++ L+ + +
Sbjct: 380 LVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLD-VDEVTYT 438
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
++ Y RG + F++ M + GV PNV + + + K G
Sbjct: 439 VLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQG 483
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 85/216 (39%), Gaps = 45/216 (20%)
Query: 38 RYPRVWKARKRIGTISKSAKL--------VTCIKGLSNVKEEVYGALDSFIAWELEFPLI 89
RY + AR+ IG++ + V C +G + LD + + ++
Sbjct: 122 RYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRV---ADALSLLDDMLRRGCQPNVV 178
Query: 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI 149
T L+ + +++ + V M +KG + TY +++N + +GR+D+A +L ++
Sbjct: 179 TYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRL 238
Query: 150 F--------------LDHLEGTPR--------------------IFFDKMISIYYNRGMH 175
F L L + R + FD +I + GM
Sbjct: 239 FSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMV 298
Query: 176 EKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
E+ ++ M E N ++ +++ N+ K G +D
Sbjct: 299 ERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVD 334
>gi|422293946|gb|EKU21246.1| hypothetical protein NGA_2092600 [Nannochloropsis gaditana CCMP526]
Length = 659
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Query: 84 LEFPLITVK-----KALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGR 138
L+ PLI V A+K + W+ + V + M ++G + ++ ++AL + G+
Sbjct: 217 LDAPLIEVDVVGFTMAIKACGQARRWREALGVLREMQARGLRPDLVSFNTAMDALGKAGQ 276
Query: 139 LDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVS 198
D A EL+T+I DH + ++ I GM ++ E+ +M+ L VRP+ +
Sbjct: 277 YDLALELFTEIE-DHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQGLSVRPDSVSYN 335
Query: 199 MMGNAFQK 206
+ AF K
Sbjct: 336 TVMAAFAK 343
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 83/213 (38%), Gaps = 39/213 (18%)
Query: 38 RYPRVWKARKRIGTISKSAKLVT---CIKGLSNVKE--EVYGALDSFIAWELEFPLITVK 92
RY ++ AR+ I ++ + T I+GL + E LD + + ++T
Sbjct: 156 RYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYT 215
Query: 93 KALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI--- 149
L+ + + + ++V M +KG + TY +++N + +GR+D+A E ++
Sbjct: 216 VLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSY 275
Query: 150 -----------FLDHLEGTPR--------------------IFFDKMISIYYNRGMHEKM 178
L L R + FD ++ + GM E+
Sbjct: 276 GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERA 335
Query: 179 FEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
++ M G N ++ +++ N K G +D
Sbjct: 336 IQVLEQMSGHGCAANTTLCNIVINTICKQGRVD 368
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF- 161
D ++ + + M + G ++ TY LLL L ++DEAEEL + L P +
Sbjct: 524 DTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLR--PDVVS 581
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNV----SIVSMMGNAFQKLGMLDKYEK-L 216
++ +IS N+G +K E+ +M + G+RP + ++VS + +A + M Y++ L
Sbjct: 582 YNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQML 641
Query: 217 KKKYPPPKWEYRYIKGKRVRI 237
K P Y + VR
Sbjct: 642 HKNVEPSSSIYGIMVDAYVRC 662
>gi|357474495|ref|XP_003607532.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355508587|gb|AES89729.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 468
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query: 84 LEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAE 143
L+F + + LK ++ + KR+ WML G + TY L+N + ++++A+
Sbjct: 219 LQFKVEEADRFLKLVDIKHSSKRLYL---WMLKAGYNFIVVTYLNLINGYSVRNQVEKAQ 275
Query: 144 ELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNA 203
+L+ +F + R ++ MI+ +Y + K+ +IF M G P V + + N+
Sbjct: 276 DLFDNMFKRGVPYDTRC-YNMMINNFYENKLFAKVIDIFNLMCSKGFYPEVVSCNYLINS 334
Query: 204 FQKLGML 210
F K G L
Sbjct: 335 FCKSGYL 341
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 65/133 (48%), Gaps = 15/133 (11%)
Query: 107 IIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMI 166
+++ K + ++ + +G++ +++N LA+ G L +A +L+ D + I + M+
Sbjct: 212 VLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLF-----DEMSERDEISWSSMV 266
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWE 226
Y + G +++ EIF M+ RP I+S + A +G +D+ +W
Sbjct: 267 DGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQ----------GRWV 316
Query: 227 YRYIKGKRVRIPA 239
+ Y+K +++ A
Sbjct: 317 HAYLKRNSIKLDA 329
>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
Length = 668
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 8/180 (4%)
Query: 47 KRIGTISKSAKLVTCIKGLSN---VKEEVYGALDSFIAWELEFPLITVKKALKTLENEKD 103
+ IG +S + I L V E L+ F+A E++ LK
Sbjct: 255 QAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIAS 314
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163
K QV M G TY LL++A GR + A L ++ D ++ + +F
Sbjct: 315 LKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVF-S 373
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML----DKYEKLKKK 219
++++ + +RG +K F + +M+ GVRP+ ++M + F K L D + K++++
Sbjct: 374 RILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREE 433
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 65/133 (48%), Gaps = 15/133 (11%)
Query: 107 IIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMI 166
+++ K + ++ + +G++ +++N LA+ G L +A +L+ D + I + M+
Sbjct: 212 VLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLF-----DEMSERDEISWSSMV 266
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWE 226
Y + G +++ EIF M+ RP I+S + A +G +D+ +W
Sbjct: 267 DGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQ----------GRWV 316
Query: 227 YRYIKGKRVRIPA 239
+ Y+K +++ A
Sbjct: 317 HAYLKRNSIKLDA 329
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI-FFDKMISIYYNRGMHEKMFEIFA 183
TY L+N L + R+ EA +L ++ + + P + F+ +I Y G EK F I +
Sbjct: 400 TYNALINGLGKVERITEAHDLVIEMEKNGV--NPSVETFNTLIDAYGRAGQLEKCFIILS 457
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLG 208
DM+E G++PNV + NAF K G
Sbjct: 458 DMQEKGLKPNVVSYGSIVNAFCKNG 482
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 83/205 (40%), Gaps = 26/205 (12%)
Query: 36 RPRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSF---IAWELEFPLITVK 92
R P W I S+ +L A+D F IA L+ I
Sbjct: 431 RGVMPDAWTYGTVIAAFSRMGRLAD--------------AMDKFNQMIAMGLKPDTIVYN 476
Query: 93 KALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYF-LLLNALAEDGRLDEAEELWTKIFL 151
++ + + ++ M+S+G R +F ++N+L ++GR+ EA++++ +
Sbjct: 477 SLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVI- 535
Query: 152 DHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML 210
H+ P + F+ +I Y G EK F + M +G+ P+V S + + + + G +
Sbjct: 536 -HIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRI 594
Query: 211 DK-----YEKLKKKYPPPKWEYRYI 230
D E L K P Y I
Sbjct: 595 DDGLILFREMLSKGVKPTTITYGII 619
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
+ T + +L K + M +KG + TY +LL+ A +G + + L+
Sbjct: 332 IFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFN 391
Query: 148 K-----IFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGN 202
I DH ++ +I Y RGM ++ IF M+E GV P+ +
Sbjct: 392 SMEGNGIVADH------SVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIA 445
Query: 203 AFQKLGML----DKYEKL 216
AF ++G L DK+ ++
Sbjct: 446 AFSRMGRLADAMDKFNQM 463
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEG-TPRIF-FDKMISIYYN 171
M G G T+ TY L+ L + G+L EAEE++ FL G P + ++ +IS Y N
Sbjct: 443 MSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMF---FLITSTGHCPDVITYNSLISGYSN 499
Query: 172 RGMHEKMFEIFADMEELGVRPNVS 195
G +K E++ M++LG++P ++
Sbjct: 500 AGNSQKCLELYETMKKLGLKPTIN 523
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
T +LLN L ++G++++AEE+ K ++H + ++ +++ Y G ++
Sbjct: 244 TCSILLNGLCKEGKVEKAEEVL-KSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQ 302
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
ME G+RPN + + + F ++ M+DK E+ KK
Sbjct: 303 MESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKK 337
>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
Length = 668
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Query: 47 KRIGTISKSAKLVTCIKGLSN---VKEEVYGALDSFIAWELEFPLITVKKALKTLENEKD 103
+ IG +S + I L + V E L+ F+A E++ LK
Sbjct: 255 QAIGLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGS 314
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163
K QV M G TY LL++A GR + A L ++ D ++ + +F
Sbjct: 315 LKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVF-S 373
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML----DKYEKLKKK 219
++++ + +RG +K F + +M+ GVRP+ ++M + F K L D +++++++
Sbjct: 374 RILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREE 433
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 83/213 (38%), Gaps = 39/213 (18%)
Query: 38 RYPRVWKARKRIGTISKSAKLVT---CIKGLSNVKE--EVYGALDSFIAWELEFPLITVK 92
RY ++ AR+ I ++ + T I+GL + E LD + + ++T
Sbjct: 125 RYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYT 184
Query: 93 KALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI--- 149
L+ + + + ++V M +KG + TY +++N + +GR+D+A E ++
Sbjct: 185 VLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSY 244
Query: 150 -----------FLDHLEGTPR--------------------IFFDKMISIYYNRGMHEKM 178
L L R + FD ++ + GM E+
Sbjct: 245 GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERA 304
Query: 179 FEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
++ M G N ++ +++ N K G +D
Sbjct: 305 IQVLEQMSGHGCAANTTLCNIVINTICKQGRVD 337
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 38/158 (24%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFL------------ 151
WK ++V K M S +G + AL + GR+ EA +++ + L
Sbjct: 310 WKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGA 369
Query: 152 --------------DHL------EGT--PRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
D+L EG R F+ +I+ Y GM +K +F DM + G
Sbjct: 370 LLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQG 429
Query: 190 VRPNVSIVSMMGNAFQKLGMLD----KYEKLKKKYPPP 223
V P++ S + +AF +LG LD K+ + PP
Sbjct: 430 VNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPP 467
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 122 TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFE 180
T+ TY +L+N R D ++ ++ L P +F ++ +I + G +K +
Sbjct: 188 TIYTYNILINCYRRARRPDLGLPVFGRLLRTGL--GPDVFSYNALIDGFSKEGEVDKAHD 245
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+F MEE G+ PNV S + N K +DK E++ ++
Sbjct: 246 LFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQ 284
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 83/213 (38%), Gaps = 39/213 (18%)
Query: 38 RYPRVWKARKRIGTISKSAKLVT---CIKGLSNVKE--EVYGALDSFIAWELEFPLITVK 92
RY ++ AR+ I ++ + T I+GL + E LD + + ++T
Sbjct: 125 RYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYT 184
Query: 93 KALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI--- 149
L+ + + + ++V M +KG + TY +++N + +GR+D+A E ++
Sbjct: 185 VLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSY 244
Query: 150 -----------FLDHLEGTPR--------------------IFFDKMISIYYNRGMHEKM 178
L L R + FD ++ + GM E+
Sbjct: 245 GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERA 304
Query: 179 FEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
++ M G N ++ +++ N K G +D
Sbjct: 305 IQVLEQMSGHGCAANTTLCNIVINTICKQGRVD 337
>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
Length = 661
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 8/178 (4%)
Query: 49 IGTISKSAKLVTCIKGLSN---VKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWK 105
IG +S + I L + V E L+ F+A E++ LK K
Sbjct: 250 IGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLK 309
Query: 106 RIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKM 165
QV M G TY LL++A GR + A L ++ D ++ + +F ++
Sbjct: 310 NAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVF-SRI 368
Query: 166 ISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML----DKYEKLKKK 219
++ + +RG +K F + +M GVRP+ ++M + F K L D +++++++
Sbjct: 369 LAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREE 426
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Query: 86 FPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEEL 145
F T+ +L D R+++ M+SKG + TY LL+ L + G+LDEA L
Sbjct: 221 FTYSTIVDSLVKSGKVDDACRLVEA---MVSKGCSPNVVTYSSLLHGLCKAGKLDEATAL 277
Query: 146 WTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
+ + +P I ++ +I + G ++ + + +M + G +PNV +++ +AF
Sbjct: 278 LQR--MTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAF 335
Query: 205 QKLGMLDKYEKL-----KKKYPPPKWEY 227
K G + L +K Y P + Y
Sbjct: 336 CKCGKAEDAIGLVEVMVEKGYVPNLFTY 363
>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
Length = 661
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 8/178 (4%)
Query: 49 IGTISKSAKLVTCIKGLSN---VKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWK 105
IG +S + I L + V E L+ F+A E++ LK K
Sbjct: 250 IGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLK 309
Query: 106 RIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKM 165
QV M G TY LL++A GR + A L ++ D ++ + +F ++
Sbjct: 310 NAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVF-SRI 368
Query: 166 ISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML----DKYEKLKKK 219
++ + +RG +K F + +M GVRP+ ++M + F K L D +++++++
Sbjct: 369 LAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREE 426
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
+IT + L + ++ +TK ML +G + TY L+ L D ++D A +W
Sbjct: 509 IITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWD 568
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+I LD + + +I + G ++ F I+ +M+E PN+ + + + F ++
Sbjct: 569 EI-LDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEI 627
Query: 208 GMLDKYEKL 216
G +DK L
Sbjct: 628 GSIDKAASL 636
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/181 (18%), Positives = 80/181 (44%), Gaps = 4/181 (2%)
Query: 31 AARGPRPRYPRVWKARKRIGTISKSAKLVTCIKGLS--NVKEEVYGALDSFIAWELEFPL 88
ARG R ++ + +R G T + GL+ + + LD + ++
Sbjct: 169 CARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADA 228
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSK-GQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
+ L +++ ++V + ++ G + TY ++L+ L + GR EA E+W+
Sbjct: 229 VCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWS 288
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
++ ++ + + + +I G + +++DM + G+ +VS+ + + F ++
Sbjct: 289 RMMANNHQADT-VTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEV 347
Query: 208 G 208
G
Sbjct: 348 G 348
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 8/180 (4%)
Query: 47 KRIGTISKSAKLVTCIKGLSN---VKEEVYGALDSFIAWELEFPLITVKKALKTLENEKD 103
+ IG +S + I L V E L+ F+A E++ LK
Sbjct: 255 QAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGS 314
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163
K QV M G TY LL++A GR + A L ++ D ++ + +F
Sbjct: 315 LKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVF-S 373
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML----DKYEKLKKK 219
++++ + +RG +K F + +M+ GVRP+ ++M + F K L D + K++++
Sbjct: 374 RILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREE 433
>gi|357137172|ref|XP_003570175.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15820-like [Brachypodium distachyon]
Length = 787
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L + ++ D RII + K M G ++ ++ A +++GR++E EE W K+
Sbjct: 304 LHSYQDVIDRDRIIALRKEMKQAGFDESLDVLVSVMRAFSKEGRVEETEETWHKVIQRGS 363
Query: 155 EGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVS----IVSMMGNA 203
E + + +M Y G K +IF +M+ + PNV+ I+ +M NA
Sbjct: 364 ERPAQAYVCQM-EAYARAGEPMKSLDIFKEMKRQSISPNVATYHKIIEIMANA 415
>gi|255578900|ref|XP_002530303.1| ATP binding protein, putative [Ricinus communis]
gi|223530159|gb|EEF32070.1| ATP binding protein, putative [Ricinus communis]
Length = 244
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 101/221 (45%), Gaps = 16/221 (7%)
Query: 2 LSLSYSLPPFTKIFEPIKISRNARSLVVCAARGPRPRYPRVWKARKRIGTISKSAKLVTC 61
L + PP +IF+ K S V C+ RG PR P +W++ KR+ T ++ + +
Sbjct: 4 LKFKFQFPPPLRIFQIPKTPNFKTSFVTCSLRGG-PRKP-LWRS-KRVST--EAIQAIQS 58
Query: 62 IKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWK----RIIQVTKWMLSK 117
+K + ++ ++ ++ L+ L+ V + L+ +NE D +Q W
Sbjct: 59 LKLAKSSNPRLHQVFNTKLSRLLKTDLLDVLEILQK-QNELDLALKVFEFVQKEIWY--- 114
Query: 118 GQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEK 177
+ Y+ ++ L ++ + AE ++K+ + L+ R F ++MI Y G EK
Sbjct: 115 --KPDLTLYYGMIEMLGKNKMTEMAEGYFSKLEKEGLKPDTRAF-NEMIGAYLKVGTTEK 171
Query: 178 MFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
E++ M+E G P+ ++ ++ G D + +KK
Sbjct: 172 AMEMYGRMKESGCVPDKLTFVILIRNLEEAGRNDLVDIIKK 212
>gi|168012346|ref|XP_001758863.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690000|gb|EDQ76369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 367
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
T+ LL + GRL EA E++ +I L+ T + + ++ +Y H++ E+F +
Sbjct: 153 TFNTLLMMHVQGGRLKEAAEVYQRILDAGLKPTV-VTYTGLVQMYCRASKHKEAIEVFLE 211
Query: 185 MEELGVRPNVSIVSMMGNAFQKLG 208
M +G +P++ I S+M + + K G
Sbjct: 212 MRRVGCKPDLMIYSLMISVYGKAG 235
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 38/158 (24%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFL------------ 151
WK ++V K M S +G + AL + GR+ EA +++ + L
Sbjct: 239 WKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGA 298
Query: 152 --------------DHL------EGT--PRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
D+L EG R F+ +I+ Y GM +K +F DM + G
Sbjct: 299 LLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQG 358
Query: 190 VRPNVSIVSMMGNAFQKLGMLD----KYEKLKKKYPPP 223
V P++ S + +AF +LG LD K+ + PP
Sbjct: 359 VNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPP 396
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 122 TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFE 180
T+ TY +L+N R D ++ ++ L P +F ++ +I + G +K +
Sbjct: 117 TIYTYNILINCYRRARRPDLGLPVFGRLLRTGL--GPDVFSYNALIDGFSKEGEVDKAHD 174
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+F MEE G+ PNV S + N K +DK E++ ++
Sbjct: 175 LFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQ 213
>gi|242094172|ref|XP_002437576.1| hypothetical protein SORBIDRAFT_10g029640 [Sorghum bicolor]
gi|241915799|gb|EER88943.1| hypothetical protein SORBIDRAFT_10g029640 [Sorghum bicolor]
Length = 429
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
+ L + W I ++ M ++G + Y +L++ + G +A E + +++
Sbjct: 227 ISRLGEQGKWDEIKKLFDGMKNRGFKESGAVYAVLVDIYGQYGHFRDARECIAALRAENM 286
Query: 155 EGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+ +PR+F + + Y +G+ E+ + MEE G PN+ +++++ NAF G
Sbjct: 287 QLSPRVFC-VLANAYAQQGLCEQTVNVLQLMEEEGFEPNLVMLNLLINAFGTAG 339
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEA-----EELWTKIFLDHLEGTPRIFFDKMISI 168
M G R TY LLL A A GRL+++ E I LD + ++ +
Sbjct: 71 MADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRRGIRLDTAG------YSMLVRL 124
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML 210
Y + GM +K ++ +M+E+GV +V I S + + F K G L
Sbjct: 125 YRDNGMWKKAIDLVMEMQEVGVELDVKIYSGLIDTFGKYGQL 166
>gi|255553861|ref|XP_002517971.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542953|gb|EEF44489.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1029
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 13 KIFEPIKISRNARSLVV-CAARGPRPR---YPRVWKARKRIGTISKSAKLVT-CIKGLSN 67
++F + AR L+ G +P+ + + R+G +S +A + +K
Sbjct: 595 QMFSGADLMDQARDLLTEMQGVGFKPQCATFSSIIACYARLGQLSDAAGVYQEMVKVGVK 654
Query: 68 VKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYF 127
E VYGA+ + A E VK+ALK +++ I + +L+
Sbjct: 655 PNEVVYGAIINGYAEE-----GNVKEALKYFHMMEEYG--ISANQIVLTS---------- 697
Query: 128 LLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFF-DKMISIYYNRGMHEKMFEIFADME 186
L+ ++ G D A++L+ K+ LEG P I + MIS+Y + GM + +F ++
Sbjct: 698 -LIKVYSKLGCFDSAKQLYQKMMC--LEGGPDIIASNSMISLYADLGMISEAELVFNNLR 754
Query: 187 ELGVRPNVSIVSMMGNAFQKLGMLDK 212
E G VS +MM ++ +GMLD+
Sbjct: 755 EKGSADGVSYATMM-YLYKGMGMLDE 779
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M+S G TY L++A E GRL EA +++ + + L + + + I Y RG
Sbjct: 538 MVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSA-VTYTVFIHAYCRRG 596
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK-----YEKLKKKYPPPKWEY 227
+ F M E GVRPN +++ +A ++G + +E L++ P K+ Y
Sbjct: 597 NLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTY 655
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167
Q+T+ M+S+G TY + L+ L + G L +A LW K+ D L+ I + +I
Sbjct: 497 FQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQ-PDCITYTCLIH 555
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML 210
+ RG + +IF M G+ P+ ++ +A+ + G L
Sbjct: 556 AHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNL 598
>gi|356540373|ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 881
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Query: 110 VTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP--RIFFDKMIS 167
V K M G R+ TY + L+ GRL E+ W+ I +G P + K++
Sbjct: 176 VLKEMDDLGIWRSKETYQIFLDYYVGAGRL---EDTWSTINEMKQKGFPLNSFMYSKVVG 232
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
IY + GM +K E+ ++ E G+ + I + + + F K G LD+ KL KK
Sbjct: 233 IYRDNGMWKKAIEVLEEIRERGISLDTHICNSIIDTFGKYGELDEALKLFKK 284
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
+ L + W I + + M +G Y +L++ + G+ A E + + +
Sbjct: 336 ISCLGEQGKWDIIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGKFQNAGECVQALKSEGV 395
Query: 155 EGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+P IF + + Y +G+ E++ + ME G+ PN+ +++M+ NAF G
Sbjct: 396 LVSPSIFC-VLANAYAQQGLCEQVIMVLQIMEAEGIEPNIVMLNMLINAFGNAG 448
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 86 FPL--ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAE 143
FPL K + + WK+ I+V + + +G +++ + G LDEA
Sbjct: 220 FPLNSFMYSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTHICNSIIDTFGKYGELDEAL 279
Query: 144 ELWTKIFLDHLEGT-PRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPN----VSIV 197
+L+ K+ EG P I ++ +I + G K F +F DM+E G+ P+ V+I+
Sbjct: 280 KLFKKM---QKEGVRPNIVTWNSLIKWHCKEGDFMKAFHLFTDMQEQGLYPDPKIFVTII 336
Query: 198 SMMG 201
S +G
Sbjct: 337 SCLG 340
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
+ D +QV M +G TY L+N L + GR++EA +L ++ L + T
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML 210
+I++ + G +E + +F DM+ G PNV + + + G+L
Sbjct: 323 CTGPIIAL-CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLL 371
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
MLS+G + Y ++NAL +DG + +AE + K+F E +P F + MI + +
Sbjct: 206 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVF--ESEMSPDTFTYTSMILGHCRK 263
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ ++F M + G PN S + N G +++
Sbjct: 264 HDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNE 303
>gi|168011113|ref|XP_001758248.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690704|gb|EDQ77070.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 658
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163
WK + + M KG + TY L+++ R EA E ++ L+ + ++
Sbjct: 445 WKEMALLLDEMRFKGLDPNVVTYTTLVDSYGTSKRYREASEYLKQMKSQGLQPSTSVYC- 503
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKY 213
+ + Y RG+ E+ E+F ME+ GV N+S+++++ NAF G+ KY
Sbjct: 504 ALANSYAKRGLCEQAMEVFKSMEKDGVELNLSMLNLLINAF---GVAGKY 550
>gi|168055626|ref|XP_001779825.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668737|gb|EDQ55338.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 734
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%)
Query: 112 KWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYN 171
+ M G + +Y +LL A A GR D A +L+ +I +F+ +I+++
Sbjct: 369 QHMQGAGIAADVTSYNILLKAYAASGRADLAGDLYAQIKKAGKVTLDVVFYSTLINVFGK 428
Query: 172 RGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
M E+ + ADM E GV PNV + + A G++D+
Sbjct: 429 AKMWEEALRVKADMLEAGVTPNVVTWTSIIGACATAGLVDQ 469
>gi|297725255|ref|NP_001174991.1| Os06g0710800 [Oryza sativa Japonica Group]
gi|53792631|dbj|BAD53645.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|215693375|dbj|BAG88757.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677390|dbj|BAH93719.1| Os06g0710800 [Oryza sativa Japonica Group]
Length = 492
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEA-----EELWTKIFLDHLEGTPRIFFDKMISI 168
M G R TY LLLNA A GRL+++ E I LD + ++ +
Sbjct: 147 MADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLD------TAGYSTLVRL 200
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
Y + GM +K ++ +M+ELGV +V I + + + F K G L K+ K
Sbjct: 201 YRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARKVFDK 251
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 98 LENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT 157
L + W I ++ M ++G + Y +L++ + G +A + + ++L+ +
Sbjct: 306 LGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALKAENLQLS 365
Query: 158 PRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
P IF + + Y +G+ E+ + ME G+ PN+ +++++ NAF G
Sbjct: 366 PSIFC-VLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAG 415
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 6/118 (5%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEG-TPRIF- 161
++ I V +++ +KG T+ T LL++L + L+++ W +F +G +P ++
Sbjct: 193 FRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKS--YW--VFETMRQGVSPDVYL 248
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
F I+ + G E ++F DME+LGV PNV + + + K G LD+ + K+K
Sbjct: 249 FSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEK 306
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 18/136 (13%)
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161
+D +RI++ + KG + TY LL+ +DGR++EAE + + ++ T I
Sbjct: 270 EDARRILESLQ---RKGLSPNVVTYTLLVKGYCKDGRMEEAERV-----VKEMKETGDIV 321
Query: 162 FDK-----MISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
D+ MI+ Y RG + + +M + G+ N+ + + M N KLG +++ +K+
Sbjct: 322 VDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV 381
Query: 217 KKKYP-----PPKWEY 227
++ P K+ Y
Sbjct: 382 LQEMEDVGMRPDKYSY 397
>gi|125556718|gb|EAZ02324.1| hypothetical protein OsI_24426 [Oryza sativa Indica Group]
gi|125598467|gb|EAZ38247.1| hypothetical protein OsJ_22623 [Oryza sativa Japonica Group]
Length = 478
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEA-----EELWTKIFLDHLEGTPRIFFDKMISI 168
M G R TY LLLNA A GRL+++ E I LD + ++ +
Sbjct: 147 MADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDTAG------YSTLVRL 200
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
Y + GM +K ++ +M+ELGV +V I + + + F K G L K+ K
Sbjct: 201 YRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARKVFDK 251
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 98 LENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT 157
L + W I ++ M ++G + Y +L++ + G +A + + ++L+ +
Sbjct: 306 LGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALKAENLQLS 365
Query: 158 PRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
P IF + + Y +G+ E+ + ME G+ PN+ +++++ NAF G
Sbjct: 366 PSIFC-VLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAG 415
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 65/112 (58%), Gaps = 3/112 (2%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMI 166
++V + M S+G T+ TY L+N L +G+L+EA+ L ++ +L+ P + ++ +I
Sbjct: 323 LKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLK--PNVITYNALI 380
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
+ Y + + E+ E+F ++ + G+ PNV + + + + K G +++ L+K
Sbjct: 381 NGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQK 432
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163
WK ++Q+ + M ++G TY LLN L + +L + L IFF
Sbjct: 258 WKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFF- 316
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYE 214
S Y GM +K +IF M + G+ PNV + +A KLG +D E
Sbjct: 317 ---SAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAE 364
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 18/136 (13%)
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161
+D +RI++ + KG + TY LL+ +DGR++EAE + + ++ T I
Sbjct: 270 EDARRILESLQ---RKGLSPNVVTYTLLVKGYCKDGRMEEAERV-----VKEMKETGDIV 321
Query: 162 FDK-----MISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
D+ MI+ Y RG + + +M + G+ N+ + + M N KLG +++ +K+
Sbjct: 322 VDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV 381
Query: 217 KKKYP-----PPKWEY 227
++ P K+ Y
Sbjct: 382 LQEMEDVGMRPDKYSY 397
>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 13/107 (12%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT---PRIF-FDKMISIYYNRGMHEKMFE 180
TY LL++ A GR + A +I L +E + P + F ++++ Y ++G +K F+
Sbjct: 348 TYSLLIDVYAHAGRWESA-----RIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQ 402
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKKKYPPP 223
+ DM+ GV+P+ ++M + F K LD +E++ + PP
Sbjct: 403 VLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPP 449
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 93 KALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD 152
+ L ++ +W++ QV K M S G Y ++++ + LD A + ++
Sbjct: 386 RILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLS- 444
Query: 153 HLEGTPR--IFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
EG P + ++ +I + G H+ E+F++M++ G P ++ ++M N+
Sbjct: 445 --EGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSM 496
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 63/145 (43%), Gaps = 6/145 (4%)
Query: 61 CIKGLSNVKEEVYGALDSFIAWELEFPLITVKKAL-KTLENEKDWKRIIQVTKWMLSKGQ 119
C G ++ EE++ + P IT + ++ ++ W+++ M S+G
Sbjct: 462 CKSGRHDMAEELFSEMQQ----RGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGL 517
Query: 120 GRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMF 179
TY L++ + GR +A E + + T ++ + +I+ Y RG+ E
Sbjct: 518 QPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMY-NALINAYAQRGLSELAV 576
Query: 180 EIFADMEELGVRPNVSIVSMMGNAF 204
F M G+ P++ ++ + NAF
Sbjct: 577 NAFRLMTTEGLTPSLLALNSLINAF 601
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 14/108 (12%)
Query: 125 TYFLLLNALAEDGRLDEAEEL-----WTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMF 179
+Y +++ A+ GR DEA L + I LD R+ ++ ++SIY G E+
Sbjct: 411 SYSTVIDGFAKAGRFDEALNLFGEMRYLNIALD------RVSYNTLLSIYTKVGRSEEAL 464
Query: 180 EIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEY 227
+I +M +G++ +V + + + K G KY+++KK + K E+
Sbjct: 465 DILREMASVGIKKDVVTYNALLGGYGKQG---KYDEVKKVFAEMKREH 509
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMI 166
+ + + M S G + + TY LL + G+ DE ++++ ++ +H+ P + + +I
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHV--LPNLLTYSTLI 521
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML 210
Y G++++ E+F + + G+R +V + S + +A K G++
Sbjct: 522 DGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLV 565
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
+++ L G++ A+ ++ F G F +IS Y G+HE+ +F M+E
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFSGGY-GNTVYAFSALISAYGRSGLHEEAISVFNSMKEY 297
Query: 189 GVRPNVSIVSMMGNAFQKLGM 209
G+RPN+ + + +A K GM
Sbjct: 298 GLRPNLVTYNAVIDACGKGGM 318
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T + L + + I + M+++GQ +Y +LL+ L ++ RLDEA L
Sbjct: 375 VTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA 434
Query: 149 IFLDHLEGT---PRI-FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
I EG+ P I + +I G E ++F+++ G+ PNV ++M N
Sbjct: 435 I-----EGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGL 489
Query: 205 QKLGMLDKYEKL-----KKKYPPPKWEYRYIKGKRVR 236
+ G+L + KL +K Y P Y I +R
Sbjct: 490 CQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLR 526
>gi|297808179|ref|XP_002871973.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317810|gb|EFH48232.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 831
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMF 179
RT GT ++N E+G+++EA + + + L P +F F+ +I + N + +
Sbjct: 532 RTCGT---IVNGYCEEGKMEEALRFFYR--MKELGVHPNLFVFNSLIKGFLNINDMDGVG 586
Query: 180 EIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
E+ MEE GV+P+V S + NA+ +G + + E++
Sbjct: 587 EVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEI 623
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
L +K N D + +V M G + T+ L+NA + G + EE
Sbjct: 566 LFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEE--- 622
Query: 148 KIFLDHLEG--TPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
I+ D LEG P I F + Y G EK +I M + GVRPNV I + + + +
Sbjct: 623 -IYRDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGW 681
Query: 205 QKLGMLDKYEKLKKK 219
G + K ++ K
Sbjct: 682 CSAGEMKKAMQVYNK 696
>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Brachypodium distachyon]
Length = 663
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 62/110 (56%), Gaps = 7/110 (6%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
L+ L ++ ++DEA EL +++ +E + I+ + +IS ++ G +K ++I + M
Sbjct: 339 LIFGLCKNNKVDEAFELASRMLTLDIELSVCIY-NALISGFWRAGSIDKAYKIISFMRTN 397
Query: 189 GVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYP-----PPKWEY-RYIKG 232
G P++ +++ N + +GM++K EKL +K P ++ Y + +KG
Sbjct: 398 GCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKG 447
>gi|255542916|ref|XP_002512521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548482|gb|EEF49973.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 422
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 15/124 (12%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167
+ K + K + R++G++ ++++ LA++G + EA EL+ + I + MI
Sbjct: 211 VDSAKELFEKMEDRSVGSWNVMVSGLAKNGMVKEARELFND-----MREKDEISWSSMID 265
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEY 227
Y G +++ E+F M+E +RP ++S + A LG LD+ +W +
Sbjct: 266 GYIKGGNYKEALEVFNVMQEEKIRPKKFVLSSVLAACANLGALDQ----------GRWIH 315
Query: 228 RYIK 231
Y+K
Sbjct: 316 AYVK 319
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
+ D +QV M +G TY L+N L + GR++EA +L ++ L + T
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML 210
+I++ + G +E + +F DM+ G PNV + + + G+L
Sbjct: 323 CTGPIIAL-CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGIL 371
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
MLS+G + Y ++NAL +DG + +AE + K+F E +P F + MI + +
Sbjct: 206 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVF--ESEMSPDTFTYTSMILGHCRK 263
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ ++F M + G PN S + N G +++
Sbjct: 264 HDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNE 303
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF- 161
D ++ + + M + G ++ TY LLL L ++DEAEEL + L P +
Sbjct: 346 DTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLR--PDVVS 403
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNV----SIVSMMGNAFQKLGMLDKYEK-L 216
++ +IS N+G +K E+ +M + G+RP + ++VS + +A + M Y++ L
Sbjct: 404 YNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQML 463
Query: 217 KKKYPPPKWEYRYIKGKRVRIPAKPK 242
K P Y + VR K
Sbjct: 464 HKNVEPSSSIYGIMVDAYVRCENDSK 489
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 112 KWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYY 170
+ ML +G + T+ +L++ L+++G+L EA +++++ L P +F + +IS
Sbjct: 606 RCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGL--VPDVFTYTSLISNLC 663
Query: 171 NRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYP 221
G + FE+ DM + G+ PN+ + + N KLG + K +L P
Sbjct: 664 KEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIP 714
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 70/175 (40%), Gaps = 16/175 (9%)
Query: 40 PRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE 99
P V I +SK+ KL +E G + L + T + L
Sbjct: 615 PDVQTHSVLIHGLSKNGKL-----------QEAMGVFSELLDKGLVPDVFTYTSLISNLC 663
Query: 100 NEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR 159
E D K ++ M KG + TY L+N L + G + +A EL+ I +G R
Sbjct: 664 KEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGI---PEKGLAR 720
Query: 160 --IFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ + +I+ Y + F++F M+ +GV P+ + + + K G +K
Sbjct: 721 NSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEK 775
>gi|42570531|ref|NP_850859.2| SNF1-like protein kinase [Arabidopsis thaliana]
gi|75160582|sp|Q8S9D1.1|PP395_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g21222; AltName: Full=SNF1-like protein kinase AtC401
gi|19071860|dbj|BAB85674.1| SNF1-like protein kinase [Arabidopsis thaliana]
gi|332005563|gb|AED92946.1| SNF1-like protein kinase [Arabidopsis thaliana]
Length = 831
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMF 179
RT GT ++N E+G+++EA + + + L P +F F+ +I + N + +
Sbjct: 532 RTCGT---IVNGYCEEGKMEEALRFFYR--MKELGVHPNLFVFNSLIKGFLNINDMDGVG 586
Query: 180 EIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
E+ MEE GV+P+V S + NA+ +G + + E++
Sbjct: 587 EVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEI 623
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 7/135 (5%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
L +K N D + +V M G + T+ L+NA + G + EE++T
Sbjct: 566 LFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYT 625
Query: 148 KIFLDHLEG--TPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
D LEG P I F + Y G EK +I M + GVRPNV I + + + +
Sbjct: 626 ----DMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGW 681
Query: 205 QKLGMLDKYEKLKKK 219
G + K ++ KK
Sbjct: 682 CSAGEMKKAMQVYKK 696
>gi|19071826|dbj|BAB85657.1| PnC401 homologue [Arabidopsis thaliana]
Length = 831
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMF 179
RT GT ++N E+G+++EA + + + L P +F F+ +I + N + +
Sbjct: 532 RTCGT---IVNGYCEEGKMEEALRFFYR--MKELGVHPNLFVFNSLIKGFLNINDMDGVG 586
Query: 180 EIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
E+ MEE GV+P+V S + NA+ +G + + E++
Sbjct: 587 EVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEI 623
Score = 43.9 bits (102), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 7/135 (5%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
L +K N D + +V M G + T+ L+NA + G + EE++T
Sbjct: 566 LFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYT 625
Query: 148 KIFLDHLEG--TPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
D LEG P I F + Y G EK +I M + GVRPNV I + + + +
Sbjct: 626 ----DMLEGGIDPDIHAFSILAKGYARAGEPEKAKQILNQMRKFGVRPNVVIYTQIISGW 681
Query: 205 QKLGMLDKYEKLKKK 219
G + K ++ KK
Sbjct: 682 CSAGEMKKAMQVYKK 696
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 6/170 (3%)
Query: 58 LVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSK 117
L+TC + ++ EE + + +T L + K I+V + M
Sbjct: 110 LITCCRR-GSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVN 168
Query: 118 GQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEK 177
G ++ TY L++A A DG L+EA EL ++ ++ + M+S + G E
Sbjct: 169 GCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIK-LDVFTYTAMLSGFVRTGKDES 227
Query: 178 MFEIFADMEELGVRPNV----SIVSMMGNAFQKLGMLDKYEKLKKKYPPP 223
+F +M G +PN+ +++ M GN + M+ +E++K P
Sbjct: 228 AMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVP 277
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 128 LLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADME 186
+++N L ++G++ A L + D E P ++ + +I+ + G + + +F ME
Sbjct: 3 VIINMLGKEGKVSVAASLLNNLHKDGFE--PDVYAYTSLITACVSNGRYREAVMVFKKME 60
Query: 187 ELGVRPNVSIVSMMGNAFQKLGM 209
E G +P + +++ N + K+GM
Sbjct: 61 EEGCKPTLITYNVILNVYGKMGM 83
>gi|29294052|gb|AAO73889.1| protein kinase family [Arabidopsis thaliana]
Length = 854
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMF 179
RT GT ++N E+G+++EA + + + L P +F F+ +I + N + +
Sbjct: 555 RTCGT---IVNGYCEEGKMEEALRFFYR--MKELGVHPNLFVFNSLIKGFLNINDMDGVG 609
Query: 180 EIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
E+ MEE GV+P+V S + NA+ +G + + E++
Sbjct: 610 EVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEI 646
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 7/135 (5%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
L +K N D + +V M G + T+ L+NA + G + EE++T
Sbjct: 589 LFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYT 648
Query: 148 KIFLDHLEG--TPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
D LEG P I F + Y G EK +I M + GVRPNV I + + + +
Sbjct: 649 ----DMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGW 704
Query: 205 QKLGMLDKYEKLKKK 219
G + K ++ KK
Sbjct: 705 CSAGEMKKAMQVYKK 719
>gi|357122970|ref|XP_003563186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 675
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 5/166 (3%)
Query: 58 LVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSK 117
L++ + G V E L+ F+A E++ LK K QV M
Sbjct: 276 LISALGGAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSDC 335
Query: 118 GQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEK 177
G TY LL++A GR + A L ++ D ++ + +F ++++ + +RG +K
Sbjct: 336 GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVF-SRILAGFRDRGDWQK 394
Query: 178 MFEIFADMEELGVRPNVSIVSMMGNAFQKLGML----DKYEKLKKK 219
F + +M GV+P+ ++M + F K L D + +++++
Sbjct: 395 AFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREE 440
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 15/195 (7%)
Query: 26 SLVVCAARGPRPRYP-RVWKARKRIGT----ISKSAKLVTCIKGLSNVKEEVYGALDSFI 80
++V R R R +V++A K+ G I+ + + C KG ++K+ ALD F
Sbjct: 240 AMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQ----ALDIFD 295
Query: 81 AWE---LEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDG 137
+ +E IT + W+ +V M +G + + T+ L++A+ + G
Sbjct: 296 EMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGG 355
Query: 138 RLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSI 196
+++ A + T + ++ +P + + MI Y G E+ ++ DM+E GVRP+
Sbjct: 356 QMELAASIMTTMRGKNI--SPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVS 413
Query: 197 VSMMGNAFQKLGMLD 211
+ + + + KLG D
Sbjct: 414 YNTLIDIYAKLGRFD 428
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 72/146 (49%), Gaps = 13/146 (8%)
Query: 85 EFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYF--LLLNALAEDGRLDEA 142
+FP + L+ L N +W+R +Q +WM+ + R+ + ++++ L G+++ A
Sbjct: 165 DFPYL-----LRELGNRGEWERALQGYEWMVQQVHLRSEWSKLASIMISTLGRLGKVEIA 219
Query: 143 EELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGN 202
+++ + G + M+S Y G + ++F M++ G +PN+ + + +
Sbjct: 220 LDVFNRAQKAGF-GNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIID 278
Query: 203 AFQKLGM-----LDKYEKLKKKYPPP 223
A K G+ LD +++++K+ P
Sbjct: 279 ACGKGGVDLKQALDIFDEMQKEGVEP 304
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
TY L++A + G+ +A L+ K+ + L P + + +I Y GMH+ + +F
Sbjct: 448 TYNALIDAYGKQGKYKDAACLFDKMKGEGL--VPNVLTYSALIDSYSKAGMHQDVSNVFT 505
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLD 211
+ + G++P+V + S + ++ K G+++
Sbjct: 506 EFKRAGLKPDVVLYSSLIDSCCKCGLVE 533
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
L+T + N D + + + M + G + TY +L+ AL + G++D+A ++
Sbjct: 332 LVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLD 391
Query: 148 KIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
+ + + P + ++ +IS N ++ E+F +ME LGV P + + + K
Sbjct: 392 VMRVRGI--VPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGK 449
Query: 207 LG----MLDKYEKLKKKYPPP 223
LG LD +EK+KK+ P
Sbjct: 450 LGDPEKALDTFEKMKKRGIMP 470
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 110 VTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIY 169
+ K M +G G + TY +L++AL G+LD+A+EL+TK+ + + ++S +
Sbjct: 284 ILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASS-HKPDLVTYITLMSKF 342
Query: 170 YNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
N G E + +++ME G P+V +++ A K G +D+
Sbjct: 343 GNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQ 385
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
ML +G + T+ ++++AL + +++A +L+ +I TP + +I G
Sbjct: 849 MLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTP-CTYGPLIGGLLKAG 907
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
E+ +IF +M + +PN +I +++ N F K G
Sbjct: 908 RSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAG 942
>gi|302779932|ref|XP_002971741.1| hypothetical protein SELMODRAFT_96058 [Selaginella moellendorffii]
gi|300160873|gb|EFJ27490.1| hypothetical protein SELMODRAFT_96058 [Selaginella moellendorffii]
Length = 422
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 18/138 (13%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADM-EE 187
+L A++GR +E LW ++ + + I F +++ GM E+ +F M +
Sbjct: 280 MLGGYAQNGRAEEGITLWRRLGQEGI-APNEIAFTSALALCGGAGMIEEAARVFQSMAAD 338
Query: 188 LGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPP-------------KWEYRYIKGKR 234
GVRP+ S M +A + G L++ E+L P P W + +G+R
Sbjct: 339 HGVRPSREHYSAMVDALARAGHLEEAEELLASMPFPVNPVTTTSILSACNWHRDWTRGER 398
Query: 235 VRIPAKPKYELDSATEGK 252
A+ E+DS G
Sbjct: 399 A---ARGLLEIDSTHSGH 413
>gi|302782381|ref|XP_002972964.1| hypothetical protein SELMODRAFT_441948 [Selaginella moellendorffii]
gi|300159565|gb|EFJ26185.1| hypothetical protein SELMODRAFT_441948 [Selaginella moellendorffii]
Length = 748
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 25/122 (20%)
Query: 82 WELEFPLITVKKALKTL---------ENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNA 132
WEL + V K ++ +NE+D + ++Q+ K Y ++
Sbjct: 127 WELALAVFGVFKETSSIFLKPNTGVQKNEED-REVVQILK------------VYTTMVAV 173
Query: 133 LAEDGRLDEAEELWTKIFLDHLE-GTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVR 191
LA GRL+EAE + T++ L G ++ ++ Y +GM E+M + +M++ G++
Sbjct: 174 LARHGRLEEAEAILTEV--QQLGFGLDLFLYNALLGGYAKQGMAERMLDCMLEMQKFGIQ 231
Query: 192 PN 193
P+
Sbjct: 232 PD 233
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT---PRIF-FDKMISIYYNRGMHEKMFE 180
TY L++A GR + A +I L +E + P + F +++S Y ++G +K F+
Sbjct: 377 TYSFLIDAYGNAGRWESA-----RIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQ 431
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ +ME GVRP+ ++M + F K LD
Sbjct: 432 VLREMENSGVRPDRVFYNVMIDTFGKFNCLDH 463
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Query: 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI 149
T + + +++ W + + M S+G TY L++ + GR ++A E +
Sbjct: 517 TFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDM 576
Query: 150 FLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
L+ + ++ + +I+ Y RG+ E+ F M G++P++ ++ + NAF
Sbjct: 577 KAAGLKPSSTMY-NALINAYAQRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAF 630
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/112 (20%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 93 KALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD 152
+ L + ++ +W++ QV + M + G Y ++++ + LD A + ++ +
Sbjct: 415 RILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSE 474
Query: 153 HLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
+E + ++ +I + G H++ E+F +M E G P + ++M N+F
Sbjct: 475 GIE-PDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSF 525
>gi|302823465|ref|XP_002993385.1| hypothetical protein SELMODRAFT_449117 [Selaginella moellendorffii]
gi|300138816|gb|EFJ05570.1| hypothetical protein SELMODRAFT_449117 [Selaginella moellendorffii]
Length = 748
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 25/122 (20%)
Query: 82 WELEFPLITVKKALKTL---------ENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNA 132
WEL + V K ++ +NE+D + ++Q+ K Y ++
Sbjct: 127 WELALAVFGVFKETSSIFLKPNTGIQKNEED-REVVQILK------------VYTTMVAV 173
Query: 133 LAEDGRLDEAEELWTKIFLDHLE-GTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVR 191
LA GRL+EAE + T++ L G ++ ++ Y +GM E+M + +M++ G++
Sbjct: 174 LARHGRLEEAEAILTEV--QQLGFGLDLFLYNALLGGYAKQGMAERMLDCMLEMQKFGIQ 231
Query: 192 PN 193
P+
Sbjct: 232 PD 233
>gi|115444491|ref|NP_001046025.1| Os02g0170000 [Oryza sativa Japonica Group]
gi|49388067|dbj|BAD25179.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535556|dbj|BAF07939.1| Os02g0170000 [Oryza sativa Japonica Group]
Length = 397
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMI 166
++V M S G + TY L+NA A +G ++AEE++ + + P ++ ++ ++
Sbjct: 102 MKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEE--MQQAGHEPDVYAYNALM 159
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKKKYPP 222
Y G+ + EIF+ M+ +G P+ + +++ +A+ + G+ + +E+LK++
Sbjct: 160 EAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMS 219
Query: 223 P 223
P
Sbjct: 220 P 220
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 117 KGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMH 175
+G TM ++ LLL A A G EE+ ++ L TP F + M++ Y G
Sbjct: 216 RGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGL--TPDTFALNAMLNAYARAGRL 273
Query: 176 EKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYE 214
+ M +FA ME G +V ++ NA+ + G + + E
Sbjct: 274 DDMERLFAAMERRG-DADVGTYNVAVNAYGRAGYVGRME 311
>gi|242084176|ref|XP_002442513.1| hypothetical protein SORBIDRAFT_08g021140 [Sorghum bicolor]
gi|241943206|gb|EES16351.1| hypothetical protein SORBIDRAFT_08g021140 [Sorghum bicolor]
Length = 157
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
+Y +LLN A G L + +L+ + D + IF +I Y N GM ++ IF +
Sbjct: 31 SYLILLNRYATKGCLVDMTDLFNLMLGDSIAPNSHIF-SVLIKAYANCGMLDRATIIFNE 89
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLD 211
M E GV+PNV + A ++G +D
Sbjct: 90 MREQGVKPNVVTYLTVIAALCRIGKMD 116
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 6/118 (5%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEG-TPRIF- 161
++ I V +++ +KG T+ T LL++L + L+++ W +F +G +P ++
Sbjct: 260 FRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKS--YW--VFETMRQGVSPDVYL 315
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
F I+ + G E ++F DME+LGV PNV + + + K G LD+ + K+K
Sbjct: 316 FSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEK 373
>gi|302817236|ref|XP_002990294.1| hypothetical protein SELMODRAFT_131439 [Selaginella moellendorffii]
gi|300141856|gb|EFJ08563.1| hypothetical protein SELMODRAFT_131439 [Selaginella moellendorffii]
Length = 1139
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Query: 100 NEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR 159
N + + ++ + + M+S+G + TY +L L + RL +A LW + + +E +P
Sbjct: 319 NAEMFDEMLTMYEAMMSRGIVPSSVTYTTMLIHLNKAERLADAALLWEDLVEESVELSP- 377
Query: 160 IFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ + MI+IY G E+ E+F M G P+ I +M+ + KLG D+
Sbjct: 378 LAYALMITIYRKLGRFEEALEVFEAMLGAGYYPDSLIYNMVLHMLGKLGRYDE 430
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 105 KRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDK 164
K+ I + + G ++ TY +++ A+ GR +AE+++ + + +++ +
Sbjct: 878 KKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVY-SQ 936
Query: 165 MISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL-----KKK 219
M++ Y GM+E ++F M+ G+RP+ + + +A+ + G K E+L K
Sbjct: 937 MMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAG 996
Query: 220 YPP 222
PP
Sbjct: 997 CPP 999
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T + L + + I + M+++GQ +Y +LL+ L ++ RLDEA L
Sbjct: 384 VTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA 443
Query: 149 IFLDHLEGT---PRI-FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
I EG+ P I + +I G E ++F+++ G+ PNV ++M N
Sbjct: 444 I-----EGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGL 498
Query: 205 QKLGMLDKYEKL-----KKKYPPPKWEYRYIKGKRVR 236
+ G+L + KL +K Y P Y I +R
Sbjct: 499 CQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLR 535
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168
++ K M G G + TY +L++AL G+LD+A EL+ K+ R+ + M+
Sbjct: 285 RIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASS-HKPDRVTYITMLDK 343
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ + G ++ E +++ME G P+V +++ NA K G +D+
Sbjct: 344 FSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDE 387
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
L +LAE GRL EA+ ++ ++ + L + ++ M+ Y G ++ E+ +DM E
Sbjct: 481 LYSLAEMGRLREAKVIFNRLKSNGL-APDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQ 539
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P++ +++ + N K G +D+
Sbjct: 540 CEPDIIVINSLINTLYKAGRVDE 562
>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
Length = 981
Score = 44.7 bits (104), Expect = 0.049, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI 149
TV +LENE +QV ++ G + L+ GR+ +AE+L+
Sbjct: 150 TVVSLCGSLENEVPG---LQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKLF--- 203
Query: 150 FLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN-VSIVSMM 200
D +E I + MIS+Y ++G+ K F +F+DM G+RP+ ++ S+M
Sbjct: 204 --DRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLM 253
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 53/104 (50%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167
++V + ++++G + TY L++ L ++GRL EA +L+ ++ + ++ +IS
Sbjct: 170 LRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLIS 229
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
+ G ++ + M E G P+V + + N F KL LD
Sbjct: 230 GFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLD 273
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 53/104 (50%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167
++V + ++++G + TY L++ L ++GRL EA +L+ ++ + ++ +IS
Sbjct: 170 LRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLIS 229
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
+ G ++ + M E G P+V + + N F KL LD
Sbjct: 230 GFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLD 273
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 71/160 (44%), Gaps = 3/160 (1%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMI 166
I+ M+ G + Y ++ AL ++G D A E++ K LD + P + ++ M+
Sbjct: 275 IEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGK--LDEVGCPPNVSSYNTML 332
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWE 226
S ++ G + + + M G+ P+V + + + + GM+D+ L +++
Sbjct: 333 SALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQ 392
Query: 227 YRYIKGKRVRIPAKPKYELDSATEGKTNEVETTKNPNESS 266
+ K V + + +D A E +E PNE++
Sbjct: 393 PNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETT 432
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 12/148 (8%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
++T + +L + + + + K M KG Y L+ A +G+LD A E
Sbjct: 220 VVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLD 279
Query: 148 KIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMM------ 200
+ D P I ++ +++ G + EIF ++E+G PNVS + M
Sbjct: 280 CMICDGF--LPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWS 337
Query: 201 -GNAFQKLGMLDKYEKLKKKYPPPKWEY 227
G+ ++ LGM+ + L K P Y
Sbjct: 338 SGDRYRALGMIS--QMLSKGIDPDVITY 363
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 3/143 (2%)
Query: 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL 129
+E LD ++ LE T + L E R + + + S+G + TY +L
Sbjct: 132 DEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNIL 191
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEEL 188
L AL G+ DE E+ ++IF E P + + +IS G E+ + M+E
Sbjct: 192 LRALLNQGKWDEGEKWMSEIFSRGCE--PNVVTYSILISSLCRDGKIEESVNLVKVMKEK 249
Query: 189 GVRPNVSIVSMMGNAFQKLGMLD 211
G+ P+ + AF + G LD
Sbjct: 250 GLTPDAYCYDPLIAAFCREGKLD 272
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
M +G + TY L+N L +G+L+EA +LW K+ L P I ++ +I+ + +
Sbjct: 299 MQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMV--GLGLKPNIVTYNALINGFCKK 356
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
M ++ ++F D+ + + PNV + M +A+ K GM++
Sbjct: 357 KMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMME 395
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMI 166
++V M S G + TY L+NA A +G ++AEE++ + + P ++ ++ ++
Sbjct: 300 MKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEE--MQQAGHEPDVYAYNALM 357
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKKKYPP 222
Y G+ + EIF+ M+ +G P+ + +++ +A+ + G+ + +E+LK++
Sbjct: 358 EAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMS 417
Query: 223 P 223
P
Sbjct: 418 P 418
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 117 KGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEG-TPRIF-FDKMISIYYNRGM 174
+G TM ++ LLL A A G EE+ ++ H G TP F + M++ Y G
Sbjct: 414 RGMSPTMKSHMLLLAAHARSGNATRCEEVMAQL---HKSGLTPDTFALNAMLNAYARAGR 470
Query: 175 HEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYE 214
+ M +FA ME G +V ++ NA+ + G + + E
Sbjct: 471 LDDMERLFAAMERRG-DADVGTYNVAVNAYGRAGYVGRME 509
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Query: 102 KDWKRIIQVTKWMLSKGQGR-TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
K W II V +W+L + R + Y LL+ + + +L++AE ++ + T
Sbjct: 153 KKWDLIIPVCEWILYRSSFRPDIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDT 212
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKL 216
+ ++ Y N G + + ++M E G+ PN ++ + + K +K Y+++
Sbjct: 213 Y-ALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRM 271
Query: 217 KKK 219
K++
Sbjct: 272 KRE 274
>gi|284434715|gb|ADB85413.1| putative endonuclease [Phyllostachys edulis]
Length = 787
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L + ++ D +RII + K M G + ++ A +++G ++E E W K+
Sbjct: 304 LHSYQDVIDRERIIALRKEMKRAGFDECVDVLVSVMRAFSKEGNVEETEATWHKVLQSGF 363
Query: 155 EGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVS----IVSMMGNA 203
E + + +M Y G K +IF +M+E + PNV+ I+ +M NA
Sbjct: 364 EPPAQAYVCRM-EAYARTGKPMKSLDIFKEMKEQNIPPNVASYHKIIEIMANA 415
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M +G G + TY L++ L +D RLD A ++ +++ L++ I + +MI G
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRM-LENSCAPNVIIYTEMIDGLCKVG 755
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
++ + + + MEE G PNV + M + F K G +DK +L ++
Sbjct: 756 KTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQ 801
>gi|302794911|ref|XP_002979219.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
gi|300152987|gb|EFJ19627.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
Length = 1143
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Query: 100 NEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR 159
N + + ++ + + M+S+G + TY +L L + RL +A LW + + +E +P
Sbjct: 323 NAEMFDEMLTMYEAMMSRGIVPSSVTYTTMLIHLNKAERLADAALLWEDLVEESVELSP- 381
Query: 160 IFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ + MI+IY G E+ E+F M G P+ I +M+ + KLG D+
Sbjct: 382 LAYALMITIYRKLGRFEEALEVFEAMLGAGYYPDSLIYNMVLHMLGKLGRYDE 434
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 105 KRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDK 164
K+ I + + G ++ TY +++ A+ GR +AE+++ + + +++ +
Sbjct: 879 KKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVY-SQ 937
Query: 165 MISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL-----KKK 219
M++ Y GM+E ++F M+ G+RP+ + + +A+ + G K E+L K
Sbjct: 938 MMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAG 997
Query: 220 YPP 222
PP
Sbjct: 998 CPP 1000
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M+ +G T+ TY LL++AL DGR EA EL ++ L ++ +I+ + G
Sbjct: 283 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL-ALDVFTYNILINGHCKEG 341
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+K EIF +M GVR V + + A K G + + +KL
Sbjct: 342 NVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKL 384
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
E + K+ +++ + M +G T+ TY L+ AL++ G++ E ++L+ + + +
Sbjct: 340 EGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIR-PDLV 398
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
++ +I+ + G ++ FEI +ME+ + P+ + + LG +D+ KL
Sbjct: 399 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 454
>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
TY LL++A A GR + A L ++ +++ P F F ++++ Y +RG +K FE+
Sbjct: 388 TYGLLVDAYANVGRWESARHLLKQMEARNVQ--PNTFIFSRILASYRDRGEWQKTFEVLR 445
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+M+ V+P+ ++M + F K LD
Sbjct: 446 EMKNSNVKPDRHFYNVMIDTFGKFNCLDH 474
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 34 GPRPR---YPRVWKARKRIGTISKSAKLVTCIK--GLSNVKEEVYGALDSFIA----WEL 84
G +PR + + K R G++ ++ +++ ++ GLS E YG L A WE
Sbjct: 346 GLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSP-DEHTYGLLVDAYANVGRWES 404
Query: 85 EFPLI-------------TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLN 131
L+ + L + + +W++ +V + M + Y ++++
Sbjct: 405 ARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMID 464
Query: 132 ALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGV 190
+ LD A E + ++ + +E P + ++ +I + G H++ E+F +M+E G
Sbjct: 465 TFGKFNCLDHAMETYDRMLSEGIE--PDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGY 522
Query: 191 RPNVSIVSMMGNAFQKLGMLDKYEKLK 217
P + ++M N+ LG +K++++K
Sbjct: 523 LPCPTTYNIMINS---LGEQEKWDEVK 546
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEA----EELWTKIFLDHLEGTPRIF-F 162
+Q + M+ +G T+ TY LL++AL D R +A EE+ F +P +F +
Sbjct: 239 LQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGF------SPDVFTY 292
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ +I+ Y G +K E+F +M + GVR + + F + G + + ++L
Sbjct: 293 NILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRL 346
>gi|255584236|ref|XP_002532856.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527393|gb|EEF29534.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKI-FLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFA 183
+Y L + A G+L AEELW ++ L L+ T + F+ M+SIY G+ +K +IF
Sbjct: 329 SYILAIEAFGRIGQLGRAEELWLEMKSLKGLKSTEQ--FNSMLSIYCKCGLVKKATDIFR 386
Query: 184 DMEELGVRPN 193
+M+ G +PN
Sbjct: 387 EMDRNGCKPN 396
>gi|224109914|ref|XP_002333182.1| predicted protein [Populus trichocarpa]
gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa]
Length = 319
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 6/132 (4%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163
WK+ IQ+ K M ++G + TY + L+ L++ G LD+A EL+ ++ ++L + ++
Sbjct: 126 WKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLN-PDLVIYN 184
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKY--- 220
+I G E E+F + G+ P+V + + + + G+LD+ K ++
Sbjct: 185 ILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMERD 244
Query: 221 --PPPKWEYRYI 230
PP Y I
Sbjct: 245 GCPPDCCSYNVI 256
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%)
Query: 117 KGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHE 176
KG + TY LL+ ++GR++EAE++ +I + + + +I+ Y RG E
Sbjct: 228 KGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRME 287
Query: 177 KMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ +M + GV+ N+ + + M N + KLG + + EKL
Sbjct: 288 DANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKL 327
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP-RIFFDKMISIYYNRGMHEKMFEIFA 183
TY ++ A ++ EA L+ + + P R+ ++ ++ +Y GMH++ E+
Sbjct: 147 TYNTMITACIQNSHCQEALRLFQE--MKEAGCCPNRVTYNALLDVYGKGGMHKEASELLV 204
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
+ME G+ PN+ + + A+ + G+ D+ LKK
Sbjct: 205 EMEAAGISPNIVTYNELIAAYARAGLCDEAAALKK 239
>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT---PRIF-FDKMISIYYNRGMHEKMFE 180
TY LL++A + GR + A +I L +E P + F ++++ Y +RG +K F+
Sbjct: 363 TYSLLIDAYSNAGRWESA-----RIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQ 417
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ +M+ GVRP+ ++M + F K LD
Sbjct: 418 VLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDH 449
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Query: 93 KALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD 152
+ L + + +W++ QV K M + G Y ++++ + LD A + + K+ +
Sbjct: 401 RILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSE 460
Query: 153 HLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
++ + ++ +I + +HE+ E+F +M E G P V+ ++M N+F
Sbjct: 461 GIQ-PDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSF 511
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
M+ KG + T+ +++N+ E R D+ + L + L P + + +I IY
Sbjct: 492 MMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGN--MRSLGLLPNVVTYTTLIDIYGKS 549
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGM 209
G E DM+ G++P+ ++ + + NA+ + G+
Sbjct: 550 GRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGL 586
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M +G G + TY L++ L +D RLD A ++ +++ L++ I + +MI G
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRM-LENSCAPNVIIYTEMIDGLCKVG 755
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
++ + + + MEE G PNV + M + F K G +DK +L ++
Sbjct: 756 KTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQ 801
>gi|255551665|ref|XP_002516878.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543966|gb|EEF45492.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 714
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M ++G ++ TY LL+A G +W + + +EGT R+ F+ ++ + +G
Sbjct: 500 MQTEGIKPSIETYTALLDAFRRSGDTQTLMRIWKMMMSEKVEGT-RVTFNILLDGFAKQG 558
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+ + ++ ++ +LG+ P V +M+ NA+ + G K +L K+
Sbjct: 559 HYVEARDVISEFGKLGLHPTVMTYNMLMNAYARGGQHSKLPQLLKE 604
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT-PR 159
+D + + +V K + G TM ++ LLL+A + G++ + EE+ ++ H G P
Sbjct: 324 HEDAQAVFEVMKRL---GITPTMKSHMLLLSAYSRAGKVAKCEEIVNQM---HKSGIKPD 377
Query: 160 IF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
F + M+++Y G EKM E+ ME+ ++S +++ N + + G + E+L +
Sbjct: 378 TFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFR 437
Query: 219 KYP 221
P
Sbjct: 438 SLP 440
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMI 166
++V M S+ + T+ L+NA A +G ++AEE++ ++ LE P ++ ++ ++
Sbjct: 223 LKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLE--PDVYAYNALM 280
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGM 209
Y G EIF+ M+ +G P+ + ++M +A+ + G+
Sbjct: 281 EAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 323
>gi|3107905|dbj|BAA25906.1| leaf protein [Ipomoea nil]
Length = 665
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Query: 93 KALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD 152
K +KTL + + +TK + +G T+ TY +L AL R L K+ +
Sbjct: 73 KLMKTLIERGKPQEVHSITKGLTEEGHRPTLVTYTTVLAALTLQKRFKSIPLLLKKVEQN 132
Query: 153 HLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
L IFF+ MI+ + G ++ +IF M E G +P S + + F +G ++
Sbjct: 133 GLR-PDSIFFNPMINAFCESGNVKEAMKIFRKMREKGCKPTASTFNALIKGFGIIGKPEE 191
Query: 213 YEKL 216
KL
Sbjct: 192 SSKL 195
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/151 (18%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL 129
E+ +G + + L+ ++T + K+ R ++ M + + T ++
Sbjct: 226 EKAWGVVHRMVGAGLKPDVVTYNTIARAYARGKETSRAAELISQMQNNKVAPNVRTCGIV 285
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEG---TPRIF-FDKMISIYYNRGMHEKMFEIFADM 185
++ +++G + +A + F+ ++G P +F F+ ++ + + + + E M
Sbjct: 286 VDGYSKEGNMADALK-----FIYKMQGFGVHPNLFIFNSLLKGFLDITDTKGVDETLTLM 340
Query: 186 EELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+E GV+P+V S + NA+ G+++K E++
Sbjct: 341 QEFGVKPDVVTYSTIMNAWSSAGLMEKCEEM 371
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 14/108 (12%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTK-----IFLDHLEGTPRIFFDKMISIYYNRGMHEKMF 179
+Y +++ A+ GR DEA L+ + I LD R+ ++ ++SIY G E+
Sbjct: 411 SYSTVIDGFAKAGRFDEALNLFGEMRYLGIALD------RVSYNTLLSIYTKVGRSEEAL 464
Query: 180 EIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEY 227
+I +M +G++ +V + + + K G KY+++KK + K E+
Sbjct: 465 DILREMASVGIKKDVVTYNALLGGYGKQG---KYDEVKKVFTEMKREH 509
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMI 166
+ + + M S G + + TY LL + G+ DE ++++T++ +H+ P + + +I
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHV--LPNLLTYSTLI 521
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML 210
Y G++++ EIF + + G+R +V + S + +A K G++
Sbjct: 522 DGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 565
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
+++ L G++ A+ ++ F G F +IS Y G+HE+ +F M+E
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGY-GNTVYAFSALISAYGRSGLHEEAISVFNSMKEY 297
Query: 189 GVRPNVSIVSMMGNAFQKLGM 209
G+RPN+ + + +A K GM
Sbjct: 298 GLRPNLVTYNAVIDACGKGGM 318
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168
++ M S G + Y +L + R ++AEEL T+++ + + F+ ++
Sbjct: 287 EILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCP-LDDVTFNILVDF 345
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYP 221
+ G+ +++ E+ M E G P+V + + N F K G++D+ L K P
Sbjct: 346 FCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMP 398
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M +G G + TY L++ L +D RLD A ++ +++ L++ I + +MI G
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRM-LENSCAPNVIIYTEMIDGLCKVG 755
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
++ + + + MEE G PNV + M + F K G +DK +L ++
Sbjct: 756 KTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQ 801
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
M+ +G TY +L+N L ++ ++D+AEE++ ++ + P +F + +I+ +
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI--APDVFSYGVLINGFSKL 640
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
G +K IF +M E G+ PNV I +M+ F + G ++K ++L
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY ++++ L ++G L+ A+EL+ ++ +L T I + +++ Y G +MF +F +
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV-ITYTSLLNGYDKMGRRAEMFPVFDE 865
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDK 212
G+ P+ + S++ NAF K GM K
Sbjct: 866 AIAAGIEPDHIMYSVIINAFLKEGMTTK 893
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
M+ +G TY +L+N L ++ ++D+AEE++ ++ + P +F + +I+ +
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI--APDVFSYGVLINGFSKL 640
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
G +K IF +M E G+ PNV I +M+ F + G ++K ++L
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY ++++ L ++G L+ A+EL+ ++ +L T I + +++ Y G +MF +F +
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV-ITYTSLLNGYDKMGRRAEMFPVFDE 865
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDK 212
G+ P+ + S++ NAF K GM K
Sbjct: 866 AIAAGIEPDHIMYSVIINAFLKEGMTTK 893
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI-------------- 149
WK ++Q+ + M + G TY LLL+ L ++GR EA + +
Sbjct: 247 WKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAI 306
Query: 150 ----------------FLDHLEGTP----RIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
FLD + G R F+ M Y + M E+ IF M + G
Sbjct: 307 LLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQG 366
Query: 190 VRPNVSIVSMMGNAFQKLGMLD 211
+ P+V + +A KLG +D
Sbjct: 367 LSPDVVSFGALIDALCKLGRVD 388
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 94 ALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDH 153
L+ L NE K++ ++ M+ +G + +Y +L+N + R+DEA+ L +++ H
Sbjct: 344 CLQRLMNEA--KKVFEI---MIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMY--H 396
Query: 154 LEGTP-RIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
P + + ++ G ++ IF +M G+ PN+ S++ + F K G LD+
Sbjct: 397 KALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDE 456
Query: 213 YEKLKKKYPPPKWE 226
KL K K E
Sbjct: 457 ALKLLKSMQEKKLE 470
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 128 LLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEE 187
+L+ + G+L+ A+EL++K+F D + T R + MI G+ ++ +++F ME+
Sbjct: 478 ILIEGMFIAGKLEVAKELFSKLFADGIRPTIRT-YTVMIKGLLKEGLSDEAYDLFRKMED 536
Query: 188 LGVRPNVSIVSMMGNAF 204
G PN ++M F
Sbjct: 537 DGFLPNSCSYNVMIQGF 553
>gi|224061145|ref|XP_002300357.1| predicted protein [Populus trichocarpa]
gi|222847615|gb|EEE85162.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFF 162
D K I++ K M S+G + TY ++++ + G+++EA + ++ H + +P + +
Sbjct: 325 DMKEAIEIMKLMESRGLKPDVYTYTVIISGYSNGGQMEEACYILSEAKKKHSKLSP-VTY 383
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPN 193
+I Y +K E+ A+ME+ GV+PN
Sbjct: 384 HALIRGYCKLDQFDKALELLAEMEKFGVQPN 414
>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Brachypodium distachyon]
Length = 726
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP-RIFFDKMISIYYNR 172
ML +G + TY L+N L D RL E L+ + + L TP RI + +I Y R
Sbjct: 552 MLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGL--TPDRILYTSLIVCYCKR 609
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ EIF M +LG+ + + + + F K+ +D + L
Sbjct: 610 SNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCL 653
>gi|242036493|ref|XP_002465641.1| hypothetical protein SORBIDRAFT_01g042790 [Sorghum bicolor]
gi|241919495|gb|EER92639.1| hypothetical protein SORBIDRAFT_01g042790 [Sorghum bicolor]
Length = 691
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Query: 112 KWMLSKGQGRT-MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYY 170
+W L + R + Y ++LN L + E E LW ++ D ++ F +IS
Sbjct: 151 RWFLGNAKVRKKVILYNVVLNLLRKKRHWSETEALWAEMLRDGVQ-PDNATFSTVISCAR 209
Query: 171 NRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWE 226
G+H K E F M E G P++ S + +A+ + G + +L + KW+
Sbjct: 210 ACGLHSKAVEWFDKMPEFGCSPDMLTYSAVIDAYGRAGNSEAALRLYDRARAEKWQ 265
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 126 YFLLLNALAEDGRLDEAEELW--TKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFA 183
Y +LL+ A+ G +DEAEE++ K +D + M+++Y + I
Sbjct: 376 YNMLLSMCADIGYVDEAEEIFRDMKASMDACSKPDSWSYSSMVTLYSSTANVLGAEGILN 435
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEK 215
+M E G +PN+ +++ + + K+G D K
Sbjct: 436 EMVEAGFKPNIFVLTSLIRCYGKVGRTDDVVK 467
>gi|15226907|ref|NP_181058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100538|sp|O82178.1|PP186_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35130
gi|3668091|gb|AAC61823.1| hypothetical protein [Arabidopsis thaliana]
gi|330253974|gb|AEC09068.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 123 MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEI 181
+ TY L+NA A +G ++AEE++ ++ D LE P ++ ++ ++ Y G EI
Sbjct: 299 ICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE--PDVYVYNALMESYSRAGYPYGAAEI 356
Query: 182 FADMEELGVRPNVSIVSMMGNAFQKLGM 209
F+ M+ +G P+ + ++M +A+ + G+
Sbjct: 357 FSLMQHMGCEPDRASYNIMVDAYGRAGL 384
>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
+IT ++ EKD++ + + M SKG + TY ++++AL + GR EA +++
Sbjct: 299 VITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPNVITYTIVMHALGKAGRTQEALDIFD 358
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNA 203
K+ D F++ +I I G E + M GVRP V+ + + +A
Sbjct: 359 KVRGDGCAPDAS-FYNSLIYILGRAGRLEDANSVVDKMRMTGVRPTVATFNTLISA 413
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
M+ +G TY +L+N L ++ ++D+AEE++ ++ + P +F + +I+ +
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI--APDVFSYGVLINGFSKL 640
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
G +K IF +M E G+ PNV I +M+ F + G ++K ++L
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY ++++ L ++G L+ A+EL+ ++ +L T I + +++ Y G +MF +F +
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV-ITYTSLLNGYDKMGRRAEMFPVFDE 865
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDK 212
G+ P+ + S++ NAF K GM K
Sbjct: 866 AIAAGIEPDHIMYSVIINAFLKEGMTTK 893
>gi|147859909|emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
Length = 724
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT---PRIF-FDKMISIYYNRGMHEKMFE 180
TY LL++A A GR + A +I L +E + P + F ++++ Y +RG +K F+
Sbjct: 434 TYSLLIDAYANAGRWESA-----RIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQ 488
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ +M GV P+ ++M + F K LD
Sbjct: 489 VLREMRNSGVSPDRHFYNVMIDTFGKCNCLDH 520
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Query: 93 KALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD 152
+ L + + W++ QV + M + G Y ++++ + LD A + ++ ++
Sbjct: 472 RILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRME 531
Query: 153 HLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
++ + ++ +I + G H K E+F M+E G P + ++M N+F G ++
Sbjct: 532 GVQPDA-VTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSF---GEQER 587
Query: 213 YEKLK 217
+E +K
Sbjct: 588 WEDVK 592
>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF- 161
D + I+V ML +G + TY +L+N L +GR+ EA ++ +I LE P +
Sbjct: 360 DLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLE--PSVLT 417
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ +I + F ++ M G P+V + SM+ N + GM+D+
Sbjct: 418 YSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDE 468
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY +L+ LAE GRLDEA L+ ++ L I + +I + + +IF
Sbjct: 522 TYTVLVKGLAEQGRLDEALALFFQL-LKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKL 580
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
M+ G+ P++ I +++ N F + G ++ +L ++
Sbjct: 581 MQSNGIFPDICIYNVLINMFFREGCVENVLELLRE 615
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 4/148 (2%)
Query: 61 CIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQG 120
C GLS+ + + D + +E ++T LK L D+K +++ ML +G
Sbjct: 253 CRDGLSS---KAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVT 309
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
Y LL+ L + G A LW I + + F + MI+ G + E
Sbjct: 310 PNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAF-NTMINGLCKMGEMDGAKE 368
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLG 208
F MEELG +P+ + + + K+G
Sbjct: 369 TFKRMEELGCKPDGITYRTLSDGYCKVG 396
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEG-TPRIF-FDKMISIYYN 171
M++KG + TY LLN L + G LD A L+ K+ HL+G P + ++ +I Y
Sbjct: 618 MVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKL---HLKGLIPNVVTYNILIDGYCK 674
Query: 172 RGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
G + ++ M + G+ P++ S + N F K
Sbjct: 675 SGSPREALDLRGKMLKEGISPSIITYSSLINGFCK 709
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163
WK ++++ + M + G TY LLN L +GR EA L+ + ++ I +
Sbjct: 289 WKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAI-YG 347
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKKK 219
+I Y +G +M ++ M E G+ P+ I +++ A+ K M+D+ + K+K++
Sbjct: 348 ILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQ 407
Query: 220 YPPP 223
P
Sbjct: 408 GLSP 411
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL 129
++ YG + + ++T L L + + ++ M++ G+ + Y ++
Sbjct: 570 DDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNII 629
Query: 130 LNALAEDGRLDEA----EELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADM 185
LN L+++ +DEA + L +K F LE T F+ MI + G +E +FA +
Sbjct: 630 LNGLSKNNCVDEAFKLFQSLCSKDF--QLEITT---FNIMIGALFKSGRNEDAMHLFATI 684
Query: 186 EELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
G+ P+V ++ + G L++++ L
Sbjct: 685 SSYGLVPDVFTYCLIAENLIEEGYLEEFDDL 715
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 1/142 (0%)
Query: 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL 129
+EV L+ A L+ T L L N + + M+ KG + Y +L
Sbjct: 290 KEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGIL 349
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ A G L E +L + + L IF + + + Y + M ++ IF M++ G
Sbjct: 350 IHGYATKGALSEMHDLLNLMVENGLSPDHHIF-NIIFTAYAKKAMIDEAMHIFNKMKQQG 408
Query: 190 VRPNVSIVSMMGNAFQKLGMLD 211
+ P+V + +A KLG +D
Sbjct: 409 LSPDVVNYGALIDALCKLGRVD 430
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 72/216 (33%), Gaps = 36/216 (16%)
Query: 27 LVVCAARGPRPRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYG--ALDSFIAWEL 84
L VC RG RV K G T I Y D I+
Sbjct: 433 LAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGF 492
Query: 85 EFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEE 144
L T L L + DW + ML G +Y LLL A+ G E
Sbjct: 493 TPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIES 552
Query: 145 LWTKIFLD--------------------HLEGTPRIF--------------FDKMISIYY 170
+ ++++ LEG + F F+ M+++Y
Sbjct: 553 IEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYA 612
Query: 171 NRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
G++ K E+F +++ G+ P++ + + + + K
Sbjct: 613 KNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAK 648
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 64/161 (39%), Gaps = 36/161 (22%)
Query: 87 PLITVKKAL-KTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLD----- 140
P+++V AL L E D+K ++ + M+ KG + +Y L+N L G+++
Sbjct: 244 PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSF 303
Query: 141 ------------------------------EAEELWTKIFLDHLEGTPRIFFDKMISIYY 170
+A +LW ++ + ++ ++ +
Sbjct: 304 LTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFC 363
Query: 171 NRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
+ G K +F+ MEE+G PN+ + N F K G LD
Sbjct: 364 SHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLD 404
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
T+ +++ LA DG++D + L ++ L + +F +IS+Y G+ E+ E+F
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFIS-VISVYRQVGLAERAVEMFYR 136
Query: 185 MEELGVRPNVSIV-----SMMG-NAFQKLGMLDKYEKLKKK-YPPPKWEYRYI 230
++E G P+V I +++G N Q + M+ Y +K+ + P + Y +
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMV--YRDMKRDGFEPNVFTYNVL 187
>gi|357123699|ref|XP_003563545.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 492
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
+ L + W + ++ M ++G + Y +L++ + GR +A E + + L
Sbjct: 305 ISRLGEQGKWDELKKLFDKMRNRGLKESGAVYAVLVDIYGQYGRFRDAHECVAALKAEEL 364
Query: 155 EGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+P IF + + Y +G+ E+ + ME G+ PN+ +++++ NAF G
Sbjct: 365 HLSPSIFC-VLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFSTAG 417
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEA-----EELWTKIFLDHLEGTPRIFFDKMISI 168
M G R TY LLL+A A GRL+++ E I LD + ++ +
Sbjct: 149 MADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRRGIQLD------TAGYSTLVRL 202
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
Y + GM +K ++ +M+ELGV +V I + + + F K G L +L +K
Sbjct: 203 YRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARRLFEK 253
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 72/216 (33%), Gaps = 36/216 (16%)
Query: 27 LVVCAARGPRPRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYG--ALDSFIAWEL 84
L VC RG RV K G T I Y D I+
Sbjct: 433 LAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGF 492
Query: 85 EFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEE 144
L T L L + DW + ML G +Y LLL A+ G E
Sbjct: 493 TPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIES 552
Query: 145 LWTKIFLD--------------------HLEGTPRIF--------------FDKMISIYY 170
+ ++++ LEG + F F+ M+++Y
Sbjct: 553 IEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYA 612
Query: 171 NRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
G++ K E+F +++ G+ P++ + + + + K
Sbjct: 613 KNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAK 648
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 122 TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFE 180
TM ++ LLL++ A+ G++ EAE L +I ++ P F F+ ++S Y N G ++M
Sbjct: 336 TMKSHMLLLSSYAKAGKVTEAERLVREI--ENSGVKPDTFMFNSLLSAYGNSGRIDEMES 393
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ M +P++S ++ + NA+ + G ++K E++
Sbjct: 394 LLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEV 429
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMH-EKMFEIFA 183
TY L+NA A +G AEE++ + L + P ++ + Y+RG H E+F
Sbjct: 234 TYTALMNAHAREGNCVRAEEIFAE--LQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQ 291
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGM 209
M E GVRP+ +++ +AF + G+
Sbjct: 292 AMVEAGVRPDQVSYNILIDAFGRAGL 317
>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
Length = 528
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 12/199 (6%)
Query: 36 RPRYP----RVWKARKRIGTISKSAKLVTCIKGLSN---VKEEVYGALDSFIAWELEFPL 88
R R P + + + IG +S + I L + V E L+ F+A E++
Sbjct: 100 RARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRT 159
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
LK K QV M G TY LL++A GR + A L +
Sbjct: 160 RAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKE 219
Query: 149 IFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+ D ++ + +F ++++ + +RG +K F + +M GVRP+ ++M + F K
Sbjct: 220 MEADGVKPSSYVF-SRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYN 278
Query: 209 ML----DKYEKLKKKYPPP 223
L D +++++++ P
Sbjct: 279 CLGHAMDAFDRMREEGIEP 297
>gi|356574119|ref|XP_003555199.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Glycine max]
Length = 942
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI-F 161
D + ++ + M G T+ +L++ ++GR+D A +L+ + + TP +
Sbjct: 257 DVDKAFELVERMEGHGMRLNEKTFCVLIHGFVKEGRVDRALQLFD--IMCRVGFTPPVSL 314
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
FD +I G + + ++M+E GV P+V I + + +AF G++ K
Sbjct: 315 FDVLIGGLCRNGDSHRALSLLSEMKEFGVTPDVGIFTKLISAFPDRGVIAK 365
>gi|414589459|tpg|DAA40030.1| TPA: hypothetical protein ZEAMMB73_105332 [Zea mays]
Length = 636
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY LL AL+ G++ E++ L+ K+ + GT + ++ + + + G E+ +EI A+
Sbjct: 440 TYMSLLYALSRKGQVQESDRLF-KVAEKNGIGTGVVMYNALSNHHCTDGNMERAYEIMAE 498
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
ME+ + P+ +M+ F LG LD+ L
Sbjct: 499 MEKNRIAPDNVTYNMLMQEFCLLGKLDEAHTL 530
>gi|297792331|ref|XP_002864050.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
gi|297309885|gb|EFH40309.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
Length = 723
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 113 WMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNR 172
WM +G ++ TY LL+A G ++ E+W + + ++GT RI ++ ++ + +
Sbjct: 512 WM--EGIKPSVETYTSLLDAFRRSGDTEKLMEIWKLMLREKIKGT-RITYNTLLDGFAKQ 568
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
G++ + ++ ++ ++G++P+V +M+ NA+ + G K +L K+
Sbjct: 569 GLYIEARDVVSEFGKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKE 615
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 106 RIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKM 165
R +Q + MLS G Y+ L++ L GR+++A + +K+ L R ++ +
Sbjct: 481 RAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFS-LDRSCYNVL 539
Query: 166 ISIYYNRGMHEKMFEIFADMEELGVRPNV----SIVSMMG 201
IS + + E+++E+ +MEE GV+P+ +++S +G
Sbjct: 540 ISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLG 579
>gi|413953500|gb|AFW86149.1| hypothetical protein ZEAMMB73_846563 [Zea mays]
Length = 1039
Score = 44.3 bits (103), Expect = 0.076, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP--RIFFDKM 165
+ + M+S G ++M T+ +++ + G+LD+A E++ G P + M
Sbjct: 766 VSIYDRMVSSGVSQSMQTFNTMISVYGKGGKLDKAVEMFAAA---QELGLPIDEKMYTNM 822
Query: 166 ISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+S+Y G H++ +F M+E G+RP + M NA+ G+ +
Sbjct: 823 LSLYGKAGRHQEASLMFKRMKEDGIRPGKISFNSMINAYATSGLFSE 869
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT---PRIF-FDKMISIYYNRGMHEKMFE 180
TY LL++A A GR + A +I L +E + P + F ++++ Y +RG +K F+
Sbjct: 363 TYSLLIDAYANAGRWESA-----RIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQ 417
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ +M GV P+ ++M + F K LD
Sbjct: 418 VLREMRNSGVSPDRHFYNVMIDTFGKCNCLDH 449
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Query: 93 KALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD 152
+ L + + W++ QV + M + G Y ++++ + LD A + ++ ++
Sbjct: 401 RILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRME 460
Query: 153 HLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
++ + ++ +I + G H K E+F M+E G P + ++M N+F G ++
Sbjct: 461 GVQPDA-VTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSF---GEQER 516
Query: 213 YEKLK 217
+E +K
Sbjct: 517 WEDVK 521
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 65/144 (45%), Gaps = 4/144 (2%)
Query: 61 CIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQG 120
C G N EE++ A+ T + + ++ W+ + + M S+G
Sbjct: 477 CKSGHHNKAEELFEAMQESGCSPCT---TTYNIMINSFGEQERWEDVKTLLGKMQSQGLL 533
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
+ TY L++ + GR +A E + L+ + ++ + +I+ Y RG+ E+
Sbjct: 534 ANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMY-NALINAYAQRGLSEQAIN 592
Query: 181 IFADMEELGVRPNVSIVSMMGNAF 204
F M G++P+V +++ + NAF
Sbjct: 593 AFRVMRADGLKPSVLVLNSLINAF 616
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 72/216 (33%), Gaps = 36/216 (16%)
Query: 27 LVVCAARGPRPRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYG--ALDSFIAWEL 84
L VC RG RV K G T I Y D I+
Sbjct: 342 LAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGF 401
Query: 85 EFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEE 144
L T L L + DW + ML G +Y LLL A+ G E
Sbjct: 402 TPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIES 461
Query: 145 LWTKIFLD--------------------HLEGTPRIF--------------FDKMISIYY 170
+ ++++ LEG + F F+ M+++Y
Sbjct: 462 IEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYA 521
Query: 171 NRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
G++ K E+F +++ G+ P++ + + + + K
Sbjct: 522 KNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAK 557
>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 44.3 bits (103), Expect = 0.076, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF- 161
D + I+V ML +G + TY +L+N L +GR+ EA ++ +I LE P +
Sbjct: 360 DLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLE--PSVLT 417
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ +I + F ++ M G P+V + SM+ N + GM+D+
Sbjct: 418 YSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDE 468
Score = 38.5 bits (88), Expect = 4.4, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 120 GRTMG---TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR---IFFDKMISIYYNRG 173
GRT T+ +L++A +DGR+D+A IF LE P + + +I Y+
Sbjct: 654 GRTQPNAITFTILIDAYCKDGRMDDA----MLIFSSMLERGPEPNILTYSCLIDGYFKTE 709
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
E FE++ M V PN+ S++ + K G++++
Sbjct: 710 NTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEE 748
Score = 37.7 bits (86), Expect = 6.3, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY +L+ LAE GRLDEA L+ ++ I + +I + + +IF
Sbjct: 522 TYTVLVKGLAEQGRLDEALALFFQLLKKGFS-PDHIIYCTLIDGFCKKRDPATGLQIFKL 580
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
M+ G+ P++ I +++ N F + G ++ +L ++
Sbjct: 581 MQSNGIFPDICIYNVLINMFFREGCVENVLELLRE 615
Score = 37.4 bits (85), Expect = 9.3, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M+ KG + Y +L+N L G+L+E L++ ++ + F ++ Y G
Sbjct: 301 MIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVK-MDVVIFSSIMDAYVRVG 359
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
K E++ M + G+ PNV S++ N + G
Sbjct: 360 DLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNG 394
>gi|302819015|ref|XP_002991179.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
gi|300141007|gb|EFJ07723.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
Length = 561
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
Query: 90 TVKKALKTLENEKDWKRIIQVTKWMLSKG-QGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+V L + + WK II+ T+W++ +G YFL+L A +DG++D+ E ++ +
Sbjct: 120 SVVGTLTRFKQMQAWKIIIKFTEWLMEQGWYNFNQKDYFLVLLAYCKDGQVDKTEGIFQR 179
Query: 149 IFLDHLEGTPRI-FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+ L I + I Y R +K +F + G P M ++ +
Sbjct: 180 --MAELGVAANIEMYTLQIEGYGRRRSFDKAEAVFQRLLTTGPSPTAQTYQTMMKSYSEA 237
Query: 208 GMLDKYEKLKK 218
G LD +++ K
Sbjct: 238 GRLDDVQRIFK 248
>gi|302819136|ref|XP_002991239.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
gi|300140950|gb|EFJ07667.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
Length = 561
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
Query: 90 TVKKALKTLENEKDWKRIIQVTKWMLSKG-QGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+V L + + WK II+ T+W++ +G YFL+L A +DG++D+ E ++ +
Sbjct: 120 SVVGTLTRFKQMQAWKIIIKFTEWLMEQGWYNFNQKDYFLVLLAYCKDGQVDKTEGIFQR 179
Query: 149 IFLDHLEGTPRI-FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+ L I + I Y R +K +F + G P M ++ +
Sbjct: 180 --MAELGVVANIEMYTLQIEGYGRRRSFDKAEAVFQRLLTTGPSPTAQTYQTMMKSYSEA 237
Query: 208 GMLDKYEKLKK 218
G LD +++ K
Sbjct: 238 GRLDDVQRIFK 248
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 75 ALDSFIAWELEFP-----LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL 129
A+ F + FP + L++ E + + K M++ G T+ +L
Sbjct: 3 AISQFKSLRFRFPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVL 62
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEEL 188
+ L + G LD+A EL+ K+ E P + F ++ Y G K E+ +M L
Sbjct: 63 IGLLCDSGCLDDARELFDKMPEKGCE--PNEYSFGILVRGYCRAGFTSKGLELLGEMRRL 120
Query: 189 GVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
G PN + + + ++F K G D EKL
Sbjct: 121 GFSPNKVVYNTLISSFCKEGKTDDAEKL 148
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 17/115 (14%)
Query: 118 GQGRTMG------TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYY 170
G+ R +G Y L+++ ++G+ D+AE+L ++ D L +P + F+ IS
Sbjct: 115 GEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGL--SPDVVTFNARISALC 172
Query: 171 NRGMHEKMFEIFADM---EELGV-RPNVSIVSMMGNAFQKLGMLDK----YEKLK 217
+ G + IF DM E LG+ +PN+ ++M F K GML++ +EK+K
Sbjct: 173 SSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMK 227
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 5/175 (2%)
Query: 41 RVWKARKRIGTISKSAKLVTCIKGLSNVK--EEVYGALDSFIAWELEFPLITVKKALKTL 98
R +K +R G + T I G +K +E +G L S LE LIT + L
Sbjct: 4 RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63
Query: 99 ENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP 158
+ K +V M KG TY L+N ++G +A L ++ + L +P
Sbjct: 64 CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGL--SP 121
Query: 159 RIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ + +I+ G + E F M G+ PN + + N F + G+LD+
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDE 176
>gi|326513138|dbj|BAK06809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 11/173 (6%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L+ L N I + M KG +G Y ++ +AL + ++ L+ K+ + +
Sbjct: 400 LEVLCNSGKTLEAIDLLHMMPEKGVATDVGMYNMVFSALGKLKQVSFITSLFDKMKANGI 459
Query: 155 EGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKY 213
P +F ++ MIS Y G+ +K +F DM +P+V + + N K G LD+
Sbjct: 460 --APDLFTYNIMISSYGRVGLVDKASGLFEDMNASSCKPDVITYNSLINCLGKNGDLDEA 517
Query: 214 EKL-----KKKYPPPKWEYRYIK---GKRVRIPAKPKYELDSATEGKTNEVET 258
L +K Y P + Y + GK ++ LD EG V T
Sbjct: 518 HMLFKEMQEKGYGPDVFTYSILIECFGKSNKVDMACNLFLDMIAEGCIPNVVT 570
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 59/142 (41%), Gaps = 1/142 (0%)
Query: 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL 129
+EV+ + + L+ +IT + + + + M+ G + T+ L
Sbjct: 251 QEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTAL 310
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
+ L DGR+ +A ++W K + + ++ +I + G + + DME+ G
Sbjct: 311 VGGLFNDGRVHDALDMW-KCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHG 369
Query: 190 VRPNVSIVSMMGNAFQKLGMLD 211
PN S + + F K G LD
Sbjct: 370 CFPNARTYSTLIDGFSKAGDLD 391
>gi|398016917|ref|XP_003861646.1| hypothetical protein, conserved [Leishmania donovani]
gi|322499873|emb|CBZ34947.1| hypothetical protein, conserved [Leishmania donovani]
Length = 395
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 124 GTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFA 183
TY LL++L G+L + EL+ + H+ TP + + ++ + RGM + +F
Sbjct: 170 STYEALLSSLMSGGQLRASMELYQVMIKQHMAPTPNM-YAALMEMCLQRGMPKACQSLFD 228
Query: 184 DMEELGVRP 192
DM++ GVRP
Sbjct: 229 DMQQRGVRP 237
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
+IT + L + I + K + +G M TY +L++ L +DGRL +A+
Sbjct: 399 VITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQ---- 454
Query: 148 KIFLDHL---EGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
K+F D L + + MI+ + ++ + + ME+ G P+ + NAF
Sbjct: 455 KVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAF 514
Query: 205 QKLGMLDKYEKL 216
+ M DK EKL
Sbjct: 515 FEKDMNDKAEKL 526
>gi|334184699|ref|NP_001189682.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330253975|gb|AEC09069.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 123 MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEI 181
+ TY L+NA A +G ++AEE++ ++ D LE P ++ ++ ++ Y G EI
Sbjct: 321 ICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE--PDVYVYNALMESYSRAGYPYGAAEI 378
Query: 182 FADMEELGVRPNVSIVSMMGNAFQKLGM 209
F+ M+ +G P+ + ++M +A+ + G+
Sbjct: 379 FSLMQHMGCEPDRASYNIMVDAYGRAGL 406
>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 696
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY LL++A A GR + A + ++ ++E ++ ++++ Y ++G +K F++ D
Sbjct: 364 TYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVY-SRILASYRDKGEWQKSFQVLKD 422
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDK 212
M+ GV+P+ ++M + F K LD
Sbjct: 423 MKSNGVQPDRHFYNVMIDTFGKYNCLDH 450
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Query: 61 CIKGLSNVKEEVYGALDSFIAWELEFPLITVKKAL-KTLENEKDWKRIIQVTKWMLSKGQ 119
C G N+ EE++G + P IT + ++ ++ W+++ M S+G
Sbjct: 478 CKSGRHNMAEELFGEMQQ----RGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGL 533
Query: 120 GRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMF 179
TY L++ + GR +A E + + T ++ + +I+ Y RG+ E
Sbjct: 534 LPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMY-NALINAYAQRGLSELAV 592
Query: 180 EIFADMEELGVRPNVSIVSMMGNAF 204
F M G+ P++ ++ + NAF
Sbjct: 593 NAFRLMTTEGLTPSLLALNSLINAF 617
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/111 (19%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 93 KALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD 152
+ L + ++ +W++ QV K M S G Y ++++ + LD A + ++ +
Sbjct: 402 RILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSE 461
Query: 153 HLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNA 203
+ + ++ +I+ + G H E+F +M++ G P ++ ++M N+
Sbjct: 462 GIR-PDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINS 511
>gi|298705285|emb|CBJ48975.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 674
Score = 43.9 bits (102), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-F 162
W R ++ M S G + + T + ++A A+ G+ +AE+L + D L TP + +
Sbjct: 301 WARCVRYLDEMDSNGVAKDVVTVSVAISACADKGQWAQAEKLLEDMLDDGL--TPNVITY 358
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSM 199
++ + G HE+ +I M GV PNV S+
Sbjct: 359 TSLMVVLRRGGQHERAIKILDLMRSKGVMPNVRTYSV 395
>gi|146089515|ref|XP_001470404.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134070437|emb|CAM68778.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 395
Score = 43.9 bits (102), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 124 GTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFA 183
TY LL++L G+L + EL+ + H+ TP + + ++ + RGM + +F
Sbjct: 170 STYEALLSSLMSGGQLRASMELYQVMIKQHMAPTPNM-YAALMEMCLQRGMPKACQSLFD 228
Query: 184 DMEELGVRP 192
DM++ GVRP
Sbjct: 229 DMQQRGVRP 237
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT--PRIFFDKMISIYYNRGMHEKMFEIF 182
TY +L+N L + G D+A EL K+ LEG + + +I + G+ K E+F
Sbjct: 489 TYNVLINGLCKLGNFDDANELVQKM---RLEGIVPDHVTYTSIIHAHLISGLLRKAEEVF 545
Query: 183 ADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
+DM + G+ P+V +++ +++ G LD KKY
Sbjct: 546 SDMLKKGIHPSVVTYTVLIHSYAVRGRLD----FAKKY 579
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161
KD R+ ++ + M + G T+GTY +L+++L+ G + + E + ++ ++ G ++
Sbjct: 181 KDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLY 240
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+I+ Y G + E+F + G+ PN ++ N F K+G ++ E L
Sbjct: 241 -TAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEML 294
>gi|242063604|ref|XP_002453091.1| hypothetical protein SORBIDRAFT_04g038305 [Sorghum bicolor]
gi|241932922|gb|EES06067.1| hypothetical protein SORBIDRAFT_04g038305 [Sorghum bicolor]
Length = 514
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPR---IFFDKMISIYYNRGMHEKMFEIFADM 185
LL A A+ G+++EA L+ +G PR + + M+S Y G + +F DM
Sbjct: 162 LLTACAKAGQVEEARALF--------DGMPRRNDVAWSAMLSAYVAAGSFDDAVRLFEDM 213
Query: 186 EELGVRPNVSIVSMMGNAFQKLGMLDK 212
GVRPN + V + A LG LD+
Sbjct: 214 LRSGVRPNRAAVVGVLAACGALGALDQ 240
>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
Length = 698
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
TY LL++A A G +D E L+ + + + P + + +MI+IY + G +K ++
Sbjct: 354 TYCLLIDAYARAGLMDRLEALYQE--MRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLR 411
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+M++ GV P+ + +++ N F + L++
Sbjct: 412 EMQQAGVTPDAHVYNVIINTFGRTRQLEQ 440
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Query: 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI 149
T + L K W + ++ + M SKG + TY L++ A+ +A E +
Sbjct: 494 TFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLVDVYAQARLFQDAVECLQTM 553
Query: 150 FLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
D + +P + + + Y GM E+ + ME+ + N+++++++ NAF G
Sbjct: 554 KEDGMGPSPTAY-SALANAYAQLGMCEQTLHVLQTMEKENIEINLAMLNLLINAFSMAG 611
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 62 IKGLSNVKEEVYGALDSFIAWELE--FPLI-TVKKALKTLENEKDWKRIIQVTKWMLSKG 118
I GL V+ + A+D F+ + + +P + T +K L + + + K M KG
Sbjct: 295 IHGLC-VERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKG 353
Query: 119 QGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEK 177
+ TY +L+++L +L++A EL ++ L P + ++ +I+ Y RGM E
Sbjct: 354 IKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGL--MPNVITYNALINGYCKRGMIED 411
Query: 178 MFEIFADMEELGVRPNVSIVSMM------GNAFQKLGMLDKYEKLKKKYPPPKWEYRYIK 231
++ ME +RPN + + N + +G+L+K L++K P Y +
Sbjct: 412 ALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKM--LERKVLPDVVTYNSLI 469
Query: 232 GKRVR 236
+ R
Sbjct: 470 DGQCR 474
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161
KD +V K M KG R Y L++ L + R+DEA +L+ K+ D T R
Sbjct: 267 KDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRT- 325
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ +I + + +MEE G++PN+ +++ ++ L+K +L
Sbjct: 326 YTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKAREL 380
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 93/247 (37%), Gaps = 32/247 (12%)
Query: 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI 149
T + L +K ++V ML + Y +++ L + G+ DEA +L +
Sbjct: 451 TYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM--V 508
Query: 150 FLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
++ P + + MI + G EK E+ M G PN ++ N G
Sbjct: 509 MMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTG 568
Query: 209 MLDKYEKLKKKYPPPKWEYRYIKGKRVRI-----------------------PAKPKYE- 244
+LD+ KL ++ W R++ G R I P P Y
Sbjct: 569 LLDEAHKLLEEMKQTYWP-RHVAGYRKVIEGFNREFIASLYLSFEISENDSVPVAPVYRV 627
Query: 245 -LDSATEGKTNEVETTKNPNESSEEPEAAANLNESLEETEANTKELLEEAD-AISNESDI 302
+D+ + E+ N SS P +AAN N + T L +AD A +D+
Sbjct: 628 LIDNFIKAGRLEIALELNEELSSFSPFSAANQN--IHITLIENLSLAHKADKAFELYADM 685
Query: 303 SSTSNVP 309
S ++P
Sbjct: 686 ISRGSIP 692
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168
+V ML G + TY L++ L +D RLD A ++ +K+ L++ + + +MI
Sbjct: 435 EVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKM-LENSCAPNVVIYTEMIDG 493
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
G ++ +++ MEE G PNV + M + F K G ++K +L ++
Sbjct: 494 LCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQ 544
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMI 166
++V M S G + TY L+NA A +G ++AEE++ + + P ++ ++ ++
Sbjct: 443 MKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEE--MQQAGHEPDVYAYNALM 500
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKKKYPP 222
Y G+ + EIF+ M+ +G P+ + +++ +A+ + G+ + +E+LK++
Sbjct: 501 EAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMS 560
Query: 223 P 223
P
Sbjct: 561 P 561
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 122 TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFE 180
TM ++ LLL+A + GR+ +AE + L+ + P F F+ ++ Y N G +KM
Sbjct: 345 TMKSHILLLSAFVKAGRVTDAENFVRR--LESMGVEPDTFMFNSLLGAYGNSGRMDKMES 402
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
++ M+ +P++ ++ + N + + G +++ E++
Sbjct: 403 LYESMQGSVCKPDIITLNTLINVYAQGGYIERAEEI 438
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 122 TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMH-EKMFE 180
++ TY L+NA A +G AEE++ + L + P I+ + Y+RG H E
Sbjct: 240 SLFTYTALINAHAREGNCVRAEEIFAE--LQSVGFVPDIYTYNALLEAYSRGGHPAGAKE 297
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKK 218
+F M E GV+ + +++ +AF + G++ Y+ +KK
Sbjct: 298 VFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKK 339
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY L+N L + R+ A++L ++ + + T F + +I Y G EK F + ++
Sbjct: 408 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF-NTLIDAYGRTGQLEKCFIVLSE 466
Query: 185 MEELGVRPNVSIVSMMGNAFQKLG 208
M+E G++PNV + NAF K G
Sbjct: 467 MQENGLKPNVVSYGSIVNAFCKNG 490
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 119 QGRTMGTYF--LLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHE 176
G T+G Y +LLN L +DG++ AEE+ + L T R+ ++ +I+ Y G E
Sbjct: 330 NGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPT-RVIYNTLINGYCQTGELE 388
Query: 177 KMFEIFADMEELGVRPN 193
F F M+ ++P+
Sbjct: 389 GAFSTFGQMKSRHIKPD 405
>gi|357138821|ref|XP_003570985.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Brachypodium distachyon]
Length = 613
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 60/115 (52%), Gaps = 7/115 (6%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
M S G + TY L+NA A +G ++AEE++ + + P ++ ++ ++ Y
Sbjct: 318 MQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQ--MQQAGHEPDVYAYNALMEAYSRA 375
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKKKYPPP 223
G + EIF+ M+ +G P+ + +++ +A+ + G+ + +E LK++ P
Sbjct: 376 GFPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEATFESLKQQGMAP 430
>gi|357110688|ref|XP_003557148.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Brachypodium distachyon]
Length = 1038
Score = 43.9 bits (102), Expect = 0.098, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT---KIFLDHLEGTPRIFFDKMISIYY 170
M+S G +++ T+ ++++ + G+LD+A E++T ++ L E T + M+S Y
Sbjct: 773 MISSGIPQSLQTFNIMISVYGQGGKLDKATEMFTAAQELGLRIDEKT----YTNMLSFYG 828
Query: 171 NRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
G H+ +F M+E G+ P + M N + G+ DK
Sbjct: 829 KAGRHQDASVLFTRMKEEGIMPGKISFNSMVNVYATSGLHDK 870
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 8/148 (5%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T ++ L + ++ K M S G + TY +LL+ L + G L+EA +L T
Sbjct: 297 VTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTS 356
Query: 149 IFLDHLEGTPRI-FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+ LE P I ++ +I + G E E+F+ + G+RP+V ++M K
Sbjct: 357 MQERKLE--PDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKE 414
Query: 208 GMLDKYEKLKKK-----YPPPKWEYRYI 230
G+ D+ KL +K + P Y I
Sbjct: 415 GLSDEAYKLFRKMEDDGFLPDSCSYNVI 442
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 17/171 (9%)
Query: 35 PRPRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKA 94
PRP + + K +G+I+K + T + + +D F ++ L + +
Sbjct: 82 PRPSFVELGKF---LGSIAKKKQYSTVV--------SLCNQMDLFGVAHNDYTLNILINS 130
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIF-LDH 153
L L + + V M G T+ L+N L +GR+ EA EL+ ++ D
Sbjct: 131 LCRLSH---IHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDA 187
Query: 154 LEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
+ T + F ++ + +GM + +F M E GV PN+ + + N +
Sbjct: 188 MPNT--VTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGY 236
>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
Length = 1161
Score = 43.9 bits (102), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 10/141 (7%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT--PRIF 161
+ + + + K+M+ KG TY LL+ L+E G +D A + K+ L EG R+
Sbjct: 802 FSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVL---EGIFPDRLV 858
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK-----YEKL 216
FD +I+ + + ++F M+ L + P+ S M N + G LD +E L
Sbjct: 859 FDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEML 918
Query: 217 KKKYPPPKWEYRYIKGKRVRI 237
+ P Y + + R+
Sbjct: 919 QVGLQPNHTHYIALVNAKCRV 939
>gi|359490014|ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Vitis vinifera]
Length = 494
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M + G GR TY L++ GRL++ + ++ D G + K+I +Y + G
Sbjct: 119 MDALGIGRNRATYEALVDYYGRAGRLNDVWAVIGEMSRDGF-GPDSFVYSKVIGVYRDNG 177
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG----MLDKYEKLKKKYPPP 223
M +K EI ++ E+GV + I + + + F K G L+ +EK++++ P
Sbjct: 178 MWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKP 231
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 62/133 (46%), Gaps = 5/133 (3%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
+ L + W I + + M +G R+ Y +L++ + GR EE + + + +
Sbjct: 275 ISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRFQGPEECISALKSEGI 334
Query: 155 EGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF----QKLGML 210
+ + +F + + Y +G+ E+ ++ ME G+ PN+ +++M+ NAF + L L
Sbjct: 335 QPSASMFC-VLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNMLINAFGIAGRHLEAL 393
Query: 211 DKYEKLKKKYPPP 223
Y +K P
Sbjct: 394 SVYHHIKDTGISP 406
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
M S G ++ TY LLL L ++ ++DEAEEL + L P + ++ +IS N+
Sbjct: 536 MKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLR--PDVVSYNTIISACCNK 593
Query: 173 GMHEKMFEIFADMEELGVRPNVS----IVSMMGNAFQKLGMLDKYEKLKKKYPPP 223
G ++ E+ +M + +RP + ++S +G+A + M Y+ + K P
Sbjct: 594 GDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEP 648
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI-FFDKMISIYYNRGMHEKMFEIFA 183
TY L+N L + + EAE+L ++ ++ P + F+ +I Y G EK F + +
Sbjct: 407 TYNALINGLCKMEMITEAEDLVMEMEKSGVD--PSVETFNTLIDAYGRAGQLEKCFTVLS 464
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLG 208
DM++ G++ NV + AF K G
Sbjct: 465 DMQDKGIKSNVISFGSVVKAFCKNG 489
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEG---TPRIF-FDKMISIYYNRGMHEKMFE 180
TY LL++A GR + A +I L +E P F F ++++ Y +RG +K F+
Sbjct: 378 TYSLLIDAYVNAGRWESA-----RIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQ 432
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ +M+ +GV+P+ +++ + F K LD
Sbjct: 433 VLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 464
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 59/126 (46%), Gaps = 4/126 (3%)
Query: 93 KALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD 152
+ L + +W++ QV K M S G Y ++++ + LD A + ++ +
Sbjct: 416 RLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE 475
Query: 153 HLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+E R+ ++ +I + G H E+F ME G P + ++M N++ G ++
Sbjct: 476 GIE-PDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSY---GDQER 531
Query: 213 YEKLKK 218
++ +K+
Sbjct: 532 WDDMKR 537
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T + L + ++ I + ++S+G T TY LL+ L + GR+++AE L+ +
Sbjct: 905 VTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 964
Query: 149 IFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+ + I ++ +++ + G EK+ +F DM + G+ P++ +++ + K G
Sbjct: 965 MLEYGCKANCTI-YNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAG 1023
Query: 209 MLD 211
L+
Sbjct: 1024 QLN 1026
>gi|401423752|ref|XP_003876362.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492604|emb|CBZ27881.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 395
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161
KD+ + K + G + TY LL++L G+L + +L+ + H+ TP +
Sbjct: 148 KDYALALAAVKGAKTAGLRISPSTYEALLSSLMSGGQLRASMDLYQLMIQQHMAPTPNM- 206
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRP 192
+ ++ + RGM + +F DM++ GVRP
Sbjct: 207 YAALMEMCLQRGMPKACQLLFDDMQKRGVRP 237
>gi|302757495|ref|XP_002962171.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
gi|300170830|gb|EFJ37431.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
Length = 731
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 96 KTLENEKDWKRIIQVTKWMLSKGQGRT-MGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
+ L ++DW++ I+V W + + Y +LL L + + ++ W+++ + +
Sbjct: 89 RILSEQRDWRKAIEVFSWFQRQDNYEANVFLYNILLRTLGRAAKWELLQKYWSEMLGERV 148
Query: 155 EGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKY 213
P IF + ++ ++ GM ++ + M E GV P+ +VS N ++ G L++
Sbjct: 149 --PPTIFTYSILVDVHGRAGMKDEAIRFYRHMIESGVEPDEVMVSTYMNLQRRFGDLEEA 206
Query: 214 EK 215
EK
Sbjct: 207 EK 208
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT----PRIFFDK 164
+V K ML+ G + Y LLNA AE G EA++ LD L+ I +
Sbjct: 529 RVFKEMLASGVEADVICYSALLNAYAEAGFAREAQQT-----LDSLKAAGFVPDTIVYTS 583
Query: 165 MISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
M+ +Y N G+ + +I+ ++ L P+V + M N + K GM + E+L
Sbjct: 584 MMKLYSNLGLTAEAEKIYEEISRLS--PDVFAANTMLNLYIKSGMFTEAEQL 633
>gi|326527817|dbj|BAJ88981.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 491
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
+ L + W + ++ M ++G + Y +L++ + G +A+E + ++L
Sbjct: 304 INKLGEQGKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVAALKAENL 363
Query: 155 EGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+ +P IF + + Y +G+ E+ + ME G+ PN+ +++++ NAF G
Sbjct: 364 QLSPSIFC-VLANAYAQQGLCEQTVSVLQLMEAEGIEPNLVMLNLLINAFSTAG 416
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 15/113 (13%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT-------KIFLDHLEGTPRIFFDKMI 166
M G R TY LLL+A A GRL+++ W I LD + ++
Sbjct: 148 MADDGVARNRRTYMLLLDAYARAGRLEDS--WWVLGEMKRWGIRLD------TAGYSTLV 199
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+Y + GM +K ++ +M+E+GV +V I + + + F K G L K+ +K
Sbjct: 200 RLYRDSGMWKKATDLIMEMQEVGVELDVKIYNGLIDTFGKYGQLADARKMFEK 252
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY L+N L + R+ A++L ++ + + T F + +I Y G EK F + ++
Sbjct: 412 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF-NTLIDAYGRTGQLEKCFIVLSE 470
Query: 185 MEELGVRPNVSIVSMMGNAFQKLG 208
M+E G++PNV + NAF K G
Sbjct: 471 MQENGLKPNVVSYGSIVNAFCKNG 494
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 119 QGRTMGTYF--LLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHE 176
G T+G Y +LLN L +DG++ AEE+ + L T R+ ++ +I+ Y G E
Sbjct: 334 NGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPT-RVIYNTLINGYCQTGELE 392
Query: 177 KMFEIFADMEELGVRPN 193
F F M+ ++P+
Sbjct: 393 GAFSTFGQMKSRHIKPD 409
>gi|449484874|ref|XP_004157004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Cucumis sativus]
Length = 881
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
LL+A A+ G +D A +L+ L + F MIS Y GM E+ ++F +M E
Sbjct: 631 LLDAYAKCGAVDCAYKLFESSSQKDL-----VMFTSMISGYAIHGMGEEALKVFTNMLES 685
Query: 189 GVRPNVSIVSMMGNAFQKLGMLDK 212
GV+P+ +V+ + +A G++D+
Sbjct: 686 GVKPDHVVVTSILSACSHTGLVDQ 709
>gi|356540087|ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 667
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 133 LAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP 192
LA GR++EA ++ + F D E F MI+++ + + E+F M E+G P
Sbjct: 500 LARAGRIEEATWVFRQAF-DAREVKDISVFGCMINLFSKNKKYANVVEVFEKMREVGYFP 558
Query: 193 NVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+ +++++ NAF KL DK + L ++
Sbjct: 559 DSDVIALVLNAFGKLREFDKADALYRQ 585
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
M+S G TY +++A E+GRL + E++ ++ L TP + + +I + +
Sbjct: 540 MVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGL--TPSVVTYTVLIHGHAGK 597
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK-----YEKLKKKYPPPKWEY 227
G E+ F F++M+E G+ PNV + + N K+ +D+ E ++K P K+ Y
Sbjct: 598 GRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSY 657
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 122 TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEI 181
T+ TY +L++ L + G+L EAE+ T+I I ++ +IS Y N G K +
Sbjct: 560 TLVTYNVLIDGLCKKGKLTEAEDFLTQI-TSSGHSPDVITYNSLISGYANAGNVSKCLGL 618
Query: 182 FADMEELGVRPNV 194
+ M+ LG++P V
Sbjct: 619 YETMKNLGIKPTV 631
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 128 LLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEE 187
+LLN L + G++++AEE+ K F ++ + ++ ++ Y G K ME
Sbjct: 356 ILLNGLCKQGKVEKAEEILKK-FTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMES 414
Query: 188 LGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
G+RPN + + + F + +DK E+ KK
Sbjct: 415 FGLRPNSITFNSLIDKFCDMKEMDKAEEWVKK 446
>gi|356502612|ref|XP_003520112.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 697
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M ++G ++ TY LLNA G E+W + + +EGT F + ++ + +G
Sbjct: 488 MQNEGIKPSIETYTTLLNAFRHAGDAQTLMEIWKLMISEKVEGTGATF-NILVDGFAKQG 546
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+ + E+ ++ ++G++P V +M+ NA+ + G K +L K+
Sbjct: 547 LFMEAREVISEFGKVGLKPTVVTYNMLINAYARGGQHSKLPQLLKE 592
>gi|15240649|ref|NP_199839.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170477|sp|Q9FGR7.1|PP426_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g50280, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1006; Flags: Precursor
gi|9759030|dbj|BAB09399.1| unnamed protein product [Arabidopsis thaliana]
gi|332008538|gb|AED95921.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 723
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M +G ++ TY +L+A G + E+W + + ++GT RI ++ ++ + +G
Sbjct: 511 MCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGT-RITYNTLLDGFAKQG 569
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
++ + ++ ++ ++G++P+V +M+ NA+ + G K +L K+
Sbjct: 570 LYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKE 615
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 100 NEKDWKRIIQVTKWMLSKGQGRT----MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLE 155
N KDW R+ Q+ +W+L QG T +G Y LL++A + +++AE+ + ++ + L
Sbjct: 80 NYKDWPRVTQMCEWVL---QGTTFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRM-QEALC 135
Query: 156 GTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN 193
F +I+ Y G EK E+F M++ G P
Sbjct: 136 VPNEETFGVLINGYRLAGSFEKAEELFVQMQKRGYSPG 173
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT--PRIFFDKMI 166
++ K M S G + + LLL+A A GR++EAEEL + + D GT + ++ +I
Sbjct: 335 KIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERD---GTKPDTLIYNSLI 391
Query: 167 SIYYNRGMHEKMFEIFADMEELG---VRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ Y G HE M + A M + +P++ + + + + G + + E+L
Sbjct: 392 NAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEEL 444
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 114 MLSKGQGRTMG-----TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMIS 167
ML + R M T+ L+NA A G EAE + K L + P + ++ ++
Sbjct: 230 MLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDK--LQEFDYKPDHYAYNALME 287
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
Y G EIF M+ G P+ +++ NA+ + G+ + EK+ K
Sbjct: 288 AYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFK 338
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 12/130 (9%)
Query: 107 IIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKM 165
+Q+TK G ++ TY L++ + +DGRLD A ++ +++ D TP + + M
Sbjct: 502 FLQMTKC----GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD--SCTPNVVTYTAM 555
Query: 166 ISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG----MLDKYEKLKKKYP 221
I G EK ++ + MEE G PNV + + + K G LD + ++ +K
Sbjct: 556 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC 615
Query: 222 PPKW-EYRYI 230
P + YR +
Sbjct: 616 SPNYVTYRVL 625
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 85 EFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEE 144
E +T + L + ++ I + ++S+G T TY LL+ L + GR+++AE
Sbjct: 947 ESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAEN 1006
Query: 145 LWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
L+ ++ + I ++ +++ + G EK+ +F DM + G+ P++ +++ +
Sbjct: 1007 LFNEMLEYGCKANCTI-YNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTL 1065
Query: 205 QKLGMLD 211
K G L+
Sbjct: 1066 CKAGQLN 1072
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
ML+KG + +Y LL+ A G L + L+ + D + +F + +++ Y G
Sbjct: 342 MLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVF-NILVNGYAKCG 400
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG----MLDKYEKLKKKYPPPKW 225
M + IF DM++ G+ P+V + +AF ++G +DK+ + K P +
Sbjct: 401 MVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNF 456
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163
WK+ +++ K M S+G T + L + GR++EA E + + L I +
Sbjct: 297 WKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSM-LAKGHKLNIISYS 355
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKKK 219
++ Y G M +F M G+ PN + +++ N + K GM+ + +E ++K+
Sbjct: 356 TLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKR 415
Query: 220 YPPP 223
P
Sbjct: 416 GLNP 419
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 13/173 (7%)
Query: 50 GTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPL---ITVKKALKTLENEKDWKR 106
G I + T +KGL + + + A F+ + L +T +K L + K
Sbjct: 583 GCIPNTVTYTTLVKGLC-MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKT 641
Query: 107 IIQVTKWMLSK-GQGRT-----MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
+++ K MLS GQ T + +Y ++++ L + GR DEA EL+ + + L P +
Sbjct: 642 ALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKE--MKALGVIPNV 699
Query: 161 F-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ +I + G E +F +M + GV+ N S+M + F K G +DK
Sbjct: 700 ISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDK 752
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Query: 75 ALDSF--IAWELEFP-LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLN 131
A+D F +A + FP L T L +L ++++ +V + M S+G + ++ ++N
Sbjct: 170 AVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVM-SEGACPDVFSFTNVIN 228
Query: 132 ALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGV 190
AL + G+++ A EL+ K ++ L +P + ++ +I+ G + FE+ M GV
Sbjct: 229 ALCKGGKMENAIELFMK--MEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGV 286
Query: 191 RPNVSIVSMMGNAFQKLGMLDKYEKL 216
+PN+ + N KL DK +
Sbjct: 287 QPNLKTYGALINGLIKLNFFDKVNHI 312
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEG-TPRIF-FDKM 165
+ V + KG ++ T L++L + ++ E +F EG P +F F +
Sbjct: 171 VDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCE----VFRVMSEGACPDVFSFTNV 226
Query: 166 ISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
I+ G E E+F ME+LG+ PNV + + N + G LD +LK+K
Sbjct: 227 INALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEK 280
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY ++N L ++GRLD A EL K+ + ++ + + +I+ +K+ I +
Sbjct: 257 TYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTY-GALINGLIKLNFFDKVNHILDE 315
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLK 217
M G PNV + + + + + K+G ++ K+K
Sbjct: 316 MIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIK 348
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 5/192 (2%)
Query: 21 SRNARSLVVCAARGPRPRYP-RVWKARKRIGTIS-KSAKLVTCIKGLSNVK--EEVYGAL 76
S SL++ RG R +V+ R GT + S I GL V EE +G
Sbjct: 230 SHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLK 289
Query: 77 DSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAED 136
D + T +K L + + + M+++G + TY +L++ L D
Sbjct: 290 DQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRD 349
Query: 137 GRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSI 196
G+++EA + K+ D + + I ++ +I+ Y G FE+ ME+ +PNV
Sbjct: 350 GKIEEANGVCRKMVKDGIFPSV-ITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408
Query: 197 VSMMGNAFQKLG 208
+ + ++G
Sbjct: 409 FNELMEGLCRVG 420
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 7/146 (4%)
Query: 83 ELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEA 142
++++ ++T+ L L + ++ + M KG TY +L+N L G+LD A
Sbjct: 302 DIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAA 361
Query: 143 EELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMG 201
L + ++ P I ++ +IS Y +F +M+E GV PNV S +
Sbjct: 362 GALLLE--MEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLI 419
Query: 202 NAFQKLGMLDK----YEKLKKKYPPP 223
F K G D + ++K + PP
Sbjct: 420 EGFGKAGRTDAAISLFREMKAEGCPP 445
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY L+N L + R+ A++L ++ + + T F + +I Y G EK F + ++
Sbjct: 275 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF-NTLIDAYGRTGQLEKCFIVLSE 333
Query: 185 MEELGVRPNVSIVSMMGNAFQKLG 208
M+E G++PNV + NAF K G
Sbjct: 334 MQENGLKPNVVSYGSIVNAFCKNG 357
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 119 QGRTMGTYF--LLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHE 176
G T+G Y +LLN L +DG++ AEE+ + L T R+ ++ +I+ Y G E
Sbjct: 197 NGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPT-RVIYNTLINGYCQTGELE 255
Query: 177 KMFEIFADMEELGVRPN 193
F F M+ ++P+
Sbjct: 256 GAFSTFGQMKSRHIKPD 272
>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
Length = 665
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
++T + L + + + + + + M+ +G + L+ L ++ ++DEA EL +
Sbjct: 300 VVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELAS 359
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
++ ++ I+ + +IS ++ G EK ++ + M+ G P+V +++ N + +
Sbjct: 360 RMLTLDIQLNVSIY-NALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSI 418
Query: 208 GMLDKYEKLKKKYP-----PPKWEY 227
GM DK E L +K P ++ Y
Sbjct: 419 GMTDKAENLIRKMEMSGVNPDRYSY 443
>gi|302763321|ref|XP_002965082.1| hypothetical protein SELMODRAFT_83088 [Selaginella moellendorffii]
gi|300167315|gb|EFJ33920.1| hypothetical protein SELMODRAFT_83088 [Selaginella moellendorffii]
Length = 731
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 96 KTLENEKDWKRIIQVTKWMLSKGQGRT-MGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
+ L ++DW++ I+V W + + Y +LL L + + ++ W+++ + +
Sbjct: 89 RILSEQRDWRKAIEVFSWFQRQDNYEANVFLYNILLRTLGRAAKWELLQKYWSEMLGERV 148
Query: 155 EGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKY 213
P IF + ++ ++ GM ++ + M E GV P+ +VS N ++ G L++
Sbjct: 149 --PPTIFTYSILVDVHGRAGMKDEAIRFYRHMIESGVEPDEVMVSTYMNLQRRFGDLEEA 206
Query: 214 EK 215
EK
Sbjct: 207 EK 208
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT----PRIFFDK 164
+V K ML+ G + Y LLNA AE G EA++ LD L+ I +
Sbjct: 529 RVFKEMLASGVEADVICYSALLNAYAEAGFAREAQQT-----LDSLKAAGFVPDTIVYTS 583
Query: 165 MISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
M+ +Y N G+ + +I+ ++ L P+V + M N + K GM + E+L
Sbjct: 584 MMKLYSNLGLIAEAEKIYEEISRLS--PDVFAANTMLNLYIKSGMFTEAEQL 633
>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
Length = 665
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
++T + L + + + + + + M+ +G + L+ L ++ ++DEA EL +
Sbjct: 300 VVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELAS 359
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
++ ++ I+ + +IS ++ G EK ++ + M+ G P+V +++ N + +
Sbjct: 360 RMLTLDIQLNVSIY-NALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSI 418
Query: 208 GMLDKYEKLKKKYP-----PPKWEY 227
GM DK E L +K P ++ Y
Sbjct: 419 GMTDKAENLIRKMEMSGVNPDRYSY 443
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY L+N L + R+ A++L ++ + + T F + +I Y G EK F + ++
Sbjct: 227 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF-NTLIDAYGRTGQLEKCFIVLSE 285
Query: 185 MEELGVRPNVSIVSMMGNAFQKLG 208
M+E G++PNV + NAF K G
Sbjct: 286 MQENGLKPNVVSYGSIVNAFCKNG 309
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 119 QGRTMGTYF--LLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHE 176
G T+G Y +LLN L +DG++ AEE+ + L T R+ ++ +I+ Y G E
Sbjct: 149 NGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPT-RVIYNTLINGYCQTGELE 207
Query: 177 KMFEIFADMEELGVRPN 193
F F M+ ++P+
Sbjct: 208 GAFSTFGQMKSRHIKPD 224
>gi|147778635|emb|CAN76113.1| hypothetical protein VITISV_005528 [Vitis vinifera]
Length = 466
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
+ L + W I + + M +G R+ Y +L++ + GR EE + + + +
Sbjct: 294 ISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRFQGPEECISALKSEGI 353
Query: 155 EGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF----QKLGML 210
+ + +F + + Y +G+ E+ ++ ME G+ PN+ +++M+ NAF + L L
Sbjct: 354 QPSASMFC-VLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNMLINAFGIAGRHLEAL 412
Query: 211 DKYEKLKKKYP 221
Y +K P
Sbjct: 413 SVYHHIKDTVP 423
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168
+V M + G GR TY L++ GRL++ + ++ D G + K+I +
Sbjct: 133 KVLAEMDALGIGRNRATYEALVDYYGRAGRLNDVWAVIGEMSRDGF-GPDSFVYSKVIGV 191
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG----MLDKYEKLKKKYPPP 223
Y + GM +K EI ++ E+GV + I + + + F K G L+ +EK++++ P
Sbjct: 192 YRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKP 250
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
T +K + D ++ I V K M+S+ + +LLN L E GRL EA +WT
Sbjct: 420 FTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTH 479
Query: 149 IFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADM--EELGVRPNVSIVSMMGNAFQ 205
+ + L+ P + + MI + G +K ++F +M +E RP+V +++ NA
Sbjct: 480 MLGEGLK--PDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALC 537
Query: 206 K 206
+
Sbjct: 538 R 538
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
LL L + ++ +A L+ K+ +++ + + +++ +G +K F++ ME+
Sbjct: 148 LLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQG 207
Query: 189 GVRPNVSIVSMMGNAFQKLGMLDKYEKL-----KKKYPPPKWEY 227
+PN I S++ +AF K GMLD L +K PP + Y
Sbjct: 208 STKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTY 251
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T + L + ++ I + ++S+G T TY LL+ L + GR+++AE L+ +
Sbjct: 826 VTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 885
Query: 149 IFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+ + I ++ +++ + G EK+ +F DM + G+ P++ +++ + K G
Sbjct: 886 MLEYGCKANCTI-YNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAG 944
Query: 209 MLD 211
L+
Sbjct: 945 QLN 947
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 43.5 bits (101), Expect = 0.14, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 105 KRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR-IFFD 163
K ++ + M+S+G + TY L++ L + G+ DE ++ D+L +P + +
Sbjct: 326 KELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNL--SPNGVTYT 383
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
+I ++ ++ +MEE + PNV S + N F K G+LDK + K+
Sbjct: 384 VLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKR 438
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 73/169 (43%), Gaps = 5/169 (2%)
Query: 42 VWKARKRIGTISKSAKLVTCIKGLSNVK--EEVYGALDSFIAWELEFPLITVKKALKTLE 99
+++ ++G T I L+ +E+ L ++ + L+T + L
Sbjct: 296 LFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLG 355
Query: 100 NEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR 159
+ + ++ LS TY +L++AL + +DEAE++ + ++ +P
Sbjct: 356 KQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLE--MEEKSISPN 413
Query: 160 IF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+ F +I+ + RG+ +K E M+E G+ PNV + + F K
Sbjct: 414 VVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462
>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
Length = 933
Score = 43.5 bits (101), Expect = 0.14, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 105 KRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR-IFFD 163
K ++ + M+S+G + TY L++ L + G+ DE ++ D+L +P + +
Sbjct: 326 KELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNL--SPNGVTYT 383
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
+I ++ ++ +MEE + PNV S + N F K G+LDK + K+
Sbjct: 384 VLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKR 438
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 73/169 (43%), Gaps = 5/169 (2%)
Query: 42 VWKARKRIGTISKSAKLVTCIKGLSNVK--EEVYGALDSFIAWELEFPLITVKKALKTLE 99
+++ ++G T I L+ +E+ L ++ + L+T + L
Sbjct: 296 LFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLG 355
Query: 100 NEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR 159
+ + ++ LS TY +L++AL + +DEAE++ + ++ +P
Sbjct: 356 KQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLE--MEEKSISPN 413
Query: 160 IF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+ F +I+ + RG+ +K E M+E G+ PNV + + F K
Sbjct: 414 VVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 43.5 bits (101), Expect = 0.14, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 105 KRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR-IFFD 163
K ++ + M+S+G + TY L++ L + G+ DE ++ D+L +P + +
Sbjct: 326 KELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNL--SPNGVTYT 383
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
+I ++ ++ +MEE + PNV S + N F K G+LDK + K+
Sbjct: 384 VLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKR 438
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 73/169 (43%), Gaps = 5/169 (2%)
Query: 42 VWKARKRIGTISKSAKLVTCIKGLSNVK--EEVYGALDSFIAWELEFPLITVKKALKTLE 99
+++ ++G T I L+ +E+ L ++ + L+T + L
Sbjct: 296 LFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLG 355
Query: 100 NEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR 159
+ + ++ LS TY +L++AL + +DEAE++ + ++ +P
Sbjct: 356 KQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLE--MEEKSISPN 413
Query: 160 IF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+ F +I+ + RG+ +K E M+E G+ PNV + + F K
Sbjct: 414 VVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462
>gi|449469206|ref|XP_004152312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Cucumis sativus]
Length = 873
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPR---IFFDKMISIYYNRGMHEKMFEIFADM 185
LL+A A+ G +D A +L+ E + + + F MIS Y GM E+ ++F +M
Sbjct: 631 LLDAYAKCGAVDCAYKLF--------ESSSQKDLVMFTSMISGYAIHGMGEEALKVFTNM 682
Query: 186 EELGVRPNVSIVSMMGNAFQKLGMLDK 212
E GV+P+ +V+ + +A G++D+
Sbjct: 683 LESGVKPDHVVVTSILSACSHTGLVDQ 709
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168
++ M S G + Y LL L R +E EEL ++F D + F+ ++
Sbjct: 355 EILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMF-DKDCPLDDVTFNILVDF 413
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+ G+ +++ E+ M E G P+V + + N F K G++D+ L K
Sbjct: 414 FCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 464
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 12/130 (9%)
Query: 107 IIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKM 165
+Q+TK G ++ TY L++ + +DGRLD A ++ +++ D TP + + M
Sbjct: 502 FLQMTKC----GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD--SCTPNVVTYTAM 555
Query: 166 ISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG----MLDKYEKLKKKYP 221
I G EK ++ + MEE G PNV + + + K G LD + ++ +K
Sbjct: 556 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC 615
Query: 222 PPKW-EYRYI 230
P + YR +
Sbjct: 616 SPNYVTYRVL 625
>gi|428179078|gb|EKX47950.1| hypothetical protein GUITHDRAFT_136922 [Guillardia theta CCMP2712]
Length = 714
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T L ++ K W++ + V +WM G + Y +++ + GRLD+A + +
Sbjct: 412 MTFSALLSVCQHSKQWEQAMDVLEWMQDAGIQLNIRMYSAVVHVCGQAGRLDDAFRILDE 471
Query: 149 IFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMM-------G 201
D ++ +F + + R + ++ F + M+E V PN+ +++ G
Sbjct: 472 CKRDGIKPNVIMFTALIHACKVARDL-DRAFRVLELMKEDHVTPNLVTFNVLLGTCEVVG 530
Query: 202 N---AFQKLGMLDKY 213
N AFQ +G+L +Y
Sbjct: 531 NSTCAFQVVGLLQEY 545
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 117 KGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMH 175
KG + +Y +L+N + GR+DEA+ L + + H TP IF + ++ + G
Sbjct: 214 KGCAPNVRSYNILINGHCKSGRIDEAKGLLAE--MSHKSLTPDIFTYSTLMRGFCQVGRP 271
Query: 176 EKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWE 226
++ E+ +M G+ PN+ S++ + K G LD+ +L K K E
Sbjct: 272 QEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIE 322
>gi|168063537|ref|XP_001783727.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664733|gb|EDQ51441.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 445
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY +++N G++DE+ L ++ +D + T +F + ++ Y K+ ++F
Sbjct: 203 TYGIVINGYIAAGQIDESLRLIERMKMDGISPTIAVF-NHLVKGYSESMKPHKVDKVFKL 261
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDK 212
ME GV+P+V ++ NA+ G++D+
Sbjct: 262 MENFGVKPDVQTFGLIMNAWCSTGLIDE 289
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
T +K + D ++ I V K M+S+ + +LLN L E GRL EA +WT
Sbjct: 444 FTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTH 503
Query: 149 IFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADM--EELGVRPNVSIVSMMGNAFQ 205
+ + L+ P + + MI + G +K ++F +M +E RP+V +++ NA
Sbjct: 504 MLGEGLK--PDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALC 561
Query: 206 K 206
+
Sbjct: 562 R 562
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFF 162
D V M KG R +Y L++ L E GR+DE ++ K+ D T R +
Sbjct: 19 DVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRT-Y 77
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
++ + G + +F++M E G PN+ ++M NA K
Sbjct: 78 TVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCK 121
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI 149
T + L E+ + + + + M+ KG T+ TY +L+ A+ ++G D A + ++
Sbjct: 321 TYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQM 380
Query: 150 FLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+ P ++ + I + RG ++ ++ + M E GV P+ +++ +A+ LG
Sbjct: 381 VSSGYQ--PDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLG 438
Query: 209 MLD-KYEKLKKKY 220
+L+ ++ LK+ +
Sbjct: 439 LLNPAFDVLKRMF 451
>gi|297849054|ref|XP_002892408.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338250|gb|EFH68667.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKI-FLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFA 183
+Y L A A+ G LD AEELW ++ + L+ T + F+ ++S+Y G+ EK +F
Sbjct: 344 SYLLATEAFAQVGNLDRAEELWLEMKNVRGLKETEQ--FNSLLSVYCKDGLIEKAIGVFR 401
Query: 184 DMEELGVRPN 193
+M G +PN
Sbjct: 402 EMMGDGFKPN 411
>gi|297797201|ref|XP_002866485.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312320|gb|EFH42744.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 983
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
Y +++NA A +GR+DEA EL ++ + H + +IS + GM EK +
Sbjct: 620 AYMIMINAYARNGRIDEANELVEEV-VKHFVRPSSFTYTVLISGFVKMGMMEKGCQYLDK 678
Query: 185 MEELGVRPN-VSIVSMMGNAFQK 206
M E G+ PN V S++G+ +K
Sbjct: 679 MLEDGLSPNAVLYTSLIGHFLKK 701
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 67 NVKEEVYGALDSFIAWELEFP------LITVKKALKTLENEKDWKRIIQVTKWMLSKGQG 120
N+ E++ G+L + I EL+F LI V + K N++D V M G
Sbjct: 527 NIIEDL-GSLVNLI-QELDFVPDVDTYLIVVNELCKN--NDRDAA--FSVIDVMEELGLR 580
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
T+ Y ++ +L + GR+ EAEE + K+ ++ I + MI+ Y G ++ E
Sbjct: 581 PTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQ-PDEIAYMIMINAYARNGRIDEANE 639
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ ++ + VRP+ +++ + F K+GM++K
Sbjct: 640 LVEEVVKHFVRPSSFTYTVLISGFVKMGMMEK 671
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
R G++ L+N +G LD A EL+ ++ ++ + + MI+ + G HEK
Sbjct: 237 RNAGSWNSLINGFVRNGDLDRARELFVQMPEKNV-----VSWTTMINGFSQNGDHEKALS 291
Query: 181 IFADMEELGVRPN-VSIVSMMGNAFQKLGMLDKYEKLK 217
+F M E GVRPN +++VS + A K+G L E++
Sbjct: 292 MFWRMLEEGVRPNDLTVVSAL-LACTKIGALQVGERIH 328
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 70 EEVYGALDSFIAWELEFP-LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFL 128
EE Y LD L FP L+TV + L + + ++ + +G TY
Sbjct: 405 EEAYRILDEMEHASL-FPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCS 463
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
L++ L + G++DEA L+ K+ LD + + +I ++ G E +IF ++
Sbjct: 464 LIDGLGKKGQVDEAYRLFEKM-LDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRR 522
Query: 189 GVRPNVSIVSMMGNAFQKLGMLDK 212
G +P++++++ + K G ++K
Sbjct: 523 GCKPDLTLLNTYMDCVFKAGEVEK 546
>gi|255553021|ref|XP_002517553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543185|gb|EEF44717.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
L+T+ + E D + ++ +++ G G + + LL+ A G EAE++++
Sbjct: 304 LMTMTSVISACELLGDDRLGREIHGYVVRTGYGNDVSVHSLLIQMYASLGYWKEAEKVFS 363
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+ E + + MIS Y MH+K E + +ME G+ P+ ++ + +A L
Sbjct: 364 ET-----ECRDVVSWTAMISGYEGNLMHDKALETYKNMELAGIVPDEITIACVLSACASL 418
Query: 208 GMLD 211
G LD
Sbjct: 419 GQLD 422
>gi|15241801|ref|NP_201043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180621|sp|Q9LVA2.1|PP443_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g62370
gi|8809650|dbj|BAA97201.1| unnamed protein product [Arabidopsis thaliana]
gi|332010218|gb|AED97601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 982
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
Y +++N A +GR+DEA EL ++ + H + +IS + GM EK +
Sbjct: 619 AYMIMINTYARNGRIDEANELVEEV-VKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDK 677
Query: 185 MEELGVRPNVSIVSMMGNAFQKLG 208
M E G+ PNV + + + F K G
Sbjct: 678 MLEDGLSPNVVLYTALIGHFLKKG 701
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
TY +++N L + G+LDE+ E+W + + E +P +F F MI G ++F
Sbjct: 257 TYNIMINGLCKLGKLDESMEMWNR--MKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQ 314
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+M E G+ P+V + M + + G L+K +L
Sbjct: 315 EMIESGLSPDVRTYNAMLSGLFRTGKLNKCFEL 347
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 113 WMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYN 171
WM G + +Y L+NALA+ G L +A EL+ ++ + + P + ++ +I +
Sbjct: 174 WMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGV--NPDVMCYNILIDGFLR 231
Query: 172 RGMHEKMFEIFAD-MEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKKKYPPP 223
+G K EI+ + E V P+V ++M N KLG LD+ + ++KK P
Sbjct: 232 KGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSP 288
>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
Length = 521
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 100 NEKDWKRIIQVTKWMLSKGQGR-TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP 158
N KDW R+ Q+ +W+L R +G Y LL++A + +++AE+ + ++ + L
Sbjct: 80 NYKDWPRVTQMCEWVLQGTAFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRM-QEALCVPN 138
Query: 159 RIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN 193
F +I+ Y G EK E+F M++ G P
Sbjct: 139 EETFGVLINGYRLAGSFEKAEELFVQMQKRGYSPG 173
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT--PRIFFDKMI 166
++ K M S G + + LLL+A A GR++EAEEL + + D GT + ++ +I
Sbjct: 335 KIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERD---GTKPDTLIYNALI 391
Query: 167 SIYYNRGMHEKMFEIFADMEELG---VRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ Y G HE M + A M + +P++ + + + + G + K E+L
Sbjct: 392 NAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPKAEEL 444
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 114 MLSKGQGRTMG-----TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMIS 167
ML + R M T+ L+NA A G EAE + K L + P + ++ ++
Sbjct: 230 MLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDK--LQEFDYKPDHYAYNALME 287
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
Y G EIF M+ G P+ +++ NA+ + G+ + EK+ K
Sbjct: 288 AYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFK 338
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT-PR 159
+D + + +V K + G TM ++ LLL+A + G++ + EE+ ++ H G P
Sbjct: 432 HEDAQAVFEVMKRL---GITPTMKSHMLLLSAYSRAGKVAKCEEIVNQM---HKSGIKPD 485
Query: 160 IF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
F + M+++Y G EKM E+ ME+ ++S +++ N + + G + E+L +
Sbjct: 486 TFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFR 545
Query: 219 KYP 221
P
Sbjct: 546 SLP 548
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMI 166
++V M S+ + T+ L+NA A +G ++AEE++ ++ LE P ++ ++ ++
Sbjct: 331 LKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLE--PDVYAYNALM 388
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGM 209
Y G EIF+ M+ +G P+ + ++M +A+ + G+
Sbjct: 389 EAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 431
>gi|449438086|ref|XP_004136821.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 486
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Query: 109 QVTKWMLSKGQG-RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167
Q ++ S G+ R Y LL+ E+ L +AE + K+ TP + ++ M++
Sbjct: 122 QAEEYFSSIGESSRDHKVYGALLHCYVENKNLKKAEAIMQKMREVGFMKTP-LSYNAMLN 180
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+Y G HEK+ E+ +MEE+G+ N ++ NA+ + EKL K
Sbjct: 181 LYAQLGKHEKLDELVKEMEEMGIGHNRFTYNVRMNAYAAASDITNMEKLLSK 232
>gi|225434953|ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Vitis vinifera]
Length = 550
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKI-FLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFA 183
+Y L + A G+L+ AEELW +I L+ T + F+ MIS+Y G +K +F
Sbjct: 358 SYMLAIEAFGRIGQLNRAEELWLEIKSKKELKSTEQ--FNSMISVYSKHGFIDKASGLFR 415
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ME G + N + K G+L++
Sbjct: 416 EMEMNGCKANAITYRNLALGCLKAGLLEE 444
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 13/173 (7%)
Query: 50 GTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPL---ITVKKALKTLENEKDWKR 106
G I + T +KGL + + + A F+ + L +T +K L + K
Sbjct: 739 GCIPNTVTYTTLVKGLC-MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKT 797
Query: 107 IIQVTKWMLSK-GQGRT-----MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
+++ K MLS GQ T + +Y ++++ L + GR DEA EL+ + + L P +
Sbjct: 798 ALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKE--MKALGVIPNV 855
Query: 161 F-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ +I + G E +F +M + GV+ N S+M + F K G +DK
Sbjct: 856 ISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDK 908
>gi|303280720|ref|XP_003059652.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458307|gb|EEH55604.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 196
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
IT + + WK+ ++V + M ++G + TY L++A A+ +LD+A E++
Sbjct: 28 ITCSALINACGKSRQWKKALEVFEEMRAEGVEANIYTYSALISACAKGKQLDKALEIFEL 87
Query: 149 IFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
++ +E I + MIS +K EIF M++ G+ N + + A ++ G
Sbjct: 88 CKVNGVE-PDGITYGAMISACEKGRRVDKALEIFVQMKKAGMEANAITYNALLAACERAG 146
Query: 209 MLD 211
D
Sbjct: 147 KAD 149
>gi|50306657|ref|XP_453302.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642436|emb|CAH00398.1| KLLA0D05423p [Kluyveromyces lactis]
Length = 949
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L L ++DW R+ + G+ T+ Y +++ AL+ G L+ E+L ++ +
Sbjct: 316 LVALAKKQDWDRLKHQFDALFGIGELPTVNHYGVIMYALSMHGELELVEKLHGQLLRRDM 375
Query: 155 EGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
+ + +I+ +YN G + FA + G+RP + ++ A++K+G LD
Sbjct: 376 TPSYAVLLS-IINAHYNVGDYNGAVREFALFKRYGIRPTSASYLIVLKAYKKMGSLD 431
>gi|388499386|gb|AFK37759.1| unknown [Lotus japonicus]
Length = 500
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMI 166
++V MLS + TY L+NA A +G ++AEE++ ++ LE P ++ ++ ++
Sbjct: 287 LKVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLE--PDVYSYNALM 344
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
Y G EIF+ M+ +G P+ + +++ +A+ + G L+ E +
Sbjct: 345 EAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEAV 394
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 12/155 (7%)
Query: 70 EEVYGALD----SFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGR-TMG 124
E ++G+LD + AW+ + TV L+ K W II + +W+L + + +
Sbjct: 103 ESIWGSLDMLPPTLDAWD---DIFTVAVQLRM---RKQWDSIISICRWILLRSSFKPDVI 156
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
Y LL+ A + EAE + ++ T + +I Y G+ EK +FA+
Sbjct: 157 CYNLLIEAFGQKLLYKEAESTYLQLLEARCIPTEDT-YALLIKAYCISGLLEKAEAVFAE 215
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
M G+ + + + N K G DK E++ K+
Sbjct: 216 MRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKR 250
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
Y +N L + G D+AEE++ ++ D + T + +I++Y G ++F +
Sbjct: 227 VYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETY-TMLINLYGKAGKSFMALKLFHE 285
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
M +PN+ + + NAF + G+ +K E++
Sbjct: 286 MMSHDCKPNICTYTALVNAFAREGLCEKAEEV 317
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY +L+N + G+++ AE L + + G +I F+ MI Y +GM + +I A
Sbjct: 319 TYGVLINGFCKIGQMEAAEMLLADMQGQGV-GLNQIIFNTMIDGYCRKGMVDDALKIKAA 377
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
ME++GV ++ + + ++ LD+ + L
Sbjct: 378 MEKMGVELDIYTYNTLACGLCRVNRLDEAKTL 409
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
+KD R+ ++ + M ++G T+GTY +L+++L+ + + E L+ ++ +++ G +
Sbjct: 225 QKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYL 284
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ +I+ Y G + ++ + GV PN ++ N F K+G ++ E L
Sbjct: 285 -YTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEML 339
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
+IT L L + I + + +G M TY +L+N L + GR ++A+ ++
Sbjct: 359 IITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFE 418
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN 193
+ + + MI ++ N GM + + + MEE G PN
Sbjct: 419 DLLVKGYNINVNTY-TVMIHVFCNNGMFGEALAMLSKMEENGCIPN 463
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT-PR 159
+D + + +V K + G TM ++ LLL+A + G++ + EE+ ++ H G P
Sbjct: 394 HEDAQAVFEVMKRL---GITPTMKSHMLLLSAYSRAGKVAKCEEIVNQM---HKSGIKPD 447
Query: 160 IF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
F + M+++Y G EKM E+ ME+ ++S +++ N + + G + E+L +
Sbjct: 448 TFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFR 507
Query: 219 KYP 221
P
Sbjct: 508 SLP 510
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMI 166
++V M S+ + T+ L+NA A +G ++AEE++ ++ LE P ++ ++ ++
Sbjct: 293 LKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLE--PDVYAYNALM 350
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGM 209
Y G EIF+ M+ +G P+ + ++M +A+ + G+
Sbjct: 351 EAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 393
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMI 166
++V M + G + TY L+NA A +G ++AEE++ + + P ++ ++ ++
Sbjct: 290 LKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEE--MQQAGHEPDVYAYNALM 347
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYE 214
Y G+ + EIF+ ME +G P+ + +++ +A+ + G+ + E
Sbjct: 348 EAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQEAE 395
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 102 KDWKRIIQVTKWMLSKGQGR-TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
+ W+ II V +W+L + R + Y LL++A + +L++AE ++ + H T
Sbjct: 143 RQWEPIITVCEWILYRSSFRPDIICYNLLIDAYGQKRQLNKAESIYMALLEAHCVPTEDT 202
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKL 216
+ ++ Y N G + + ++M++ G+ P ++ + + K +K Y+++
Sbjct: 203 -YALLLRAYCNSGQLHRAEGVISEMQKNGLPPTATVYNAYLDGLLKARCSEKAVEVYQRM 261
Query: 217 KKK 219
KK+
Sbjct: 262 KKE 264
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 24/150 (16%)
Query: 107 IIQVTKWMLSKGQG-----RTMGTYFL--------LLNALAEDGRLDEAEELWTKIFLDH 153
++ V ML+ QG +T+ T FL L++ ++ G ++ A +K FL+
Sbjct: 387 VLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERA----SKAFLE- 441
Query: 154 LEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN----VSIVSMMGNAFQKLGM 209
+ I + MI+ + GM ++ IF DM GVRPN V ++S +A
Sbjct: 442 MSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQA 501
Query: 210 LDKYEKLKKKY--PPPKWEYRYIKGKRVRI 237
L+ +E ++KKY P Y + VR+
Sbjct: 502 LNYFEIMQKKYKIKPAMDHYECMVDMFVRL 531
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
++T + + + + +++ M S G + TY +L L R ++AEEL
Sbjct: 338 VVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMI 397
Query: 148 KIFL-DHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
K+ D L F+ +IS + +G+ + FE+F M E G PN + S + K
Sbjct: 398 KMSQNDRLPDNST--FNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTK 455
Query: 207 LGMLDKYEKL 216
G +++ +L
Sbjct: 456 AGKMEQALEL 465
>gi|326487288|dbj|BAJ89628.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 461
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
+ L + W + ++ M ++G + Y +L++ + G +A+E + ++L
Sbjct: 304 INRLGEQGKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVAALKAENL 363
Query: 155 EGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+ +P IF + + Y +G+ E+ + ME G+ PN+ +++++ NAF G
Sbjct: 364 QLSPSIFC-VLANAYAQQGLCEQTVSVLQLMEAEGIEPNLVMLNLLINAFSTAG 416
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 15/113 (13%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT-------KIFLDHLEGTPRIFFDKMI 166
M G R TY LLL+A A GRL+++ W I LD + ++
Sbjct: 148 MADDGVARNRRTYMLLLDAYARAGRLEDS--WWVLGEMKRWGIRLDTAG------YSTLV 199
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+Y + GM +K ++ +M+E+GV +V I + + + F K G L K+ +K
Sbjct: 200 RLYRDSGMWKKATDLIMEMQEVGVELDVKIYNGLIDTFGKYGQLADARKMFEK 252
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLD--HLEGTPRIFFDKMISIYYNRGMHEKMFEIF 182
T+ +LL+ L + GRL +A+E++ + HL+ ++ MI + +G+ E+ +
Sbjct: 694 TFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLD---VYIYNVMIYGHCKQGLLEEALTML 750
Query: 183 ADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+ MEE G PN ++ NA K DK EKL ++
Sbjct: 751 SKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQ 787
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Query: 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL 129
E YG + ++T + K + + M+ K + TY +L
Sbjct: 150 SEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNIL 209
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++AL ++G++ EA+ + + L + I + ++ Y+ +K +F M +G
Sbjct: 210 VDALCKEGKVKEAKSVLA-VMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 268
Query: 190 VRPNVSIVSMMGNAFQKLGMLDKYEKLKK-----KYPP 222
V P+V ++M N F K+ +DK L K ++PP
Sbjct: 269 VTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP 306
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 11/144 (7%)
Query: 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI 149
V L L N ++ ++Q M+S G TY +++A E+GRL + E++ ++
Sbjct: 519 VVVDGLCKLGNLEEASELLQ---KMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEM 575
Query: 150 FLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
L TP + + +I + +G E+ F F++M+E G+ PNV + + N K+
Sbjct: 576 LSKGL--TPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVR 633
Query: 209 MLDK-----YEKLKKKYPPPKWEY 227
+D+ E ++K P K+ Y
Sbjct: 634 RMDQAYNFFAEMVEKGIFPNKYSY 657
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168
++ M S G + Y LL L R +E EEL ++F D + F+ ++
Sbjct: 318 EILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMF-DKDCPLDDVTFNILVDF 376
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
+ G+ +++ E+ M E G P+V + + N F K G++D+ L K
Sbjct: 377 FCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLK 426
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY +L+ + G+++ AE L + + G +I F+ MI Y +GM + +I A
Sbjct: 273 TYGVLIKGFCKIGQMEAAEMLLADMQGQGV-GLNQIIFNTMIDGYCRKGMVDDALKIKAA 331
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKY 213
ME++GV N+ + + ++G++ Y
Sbjct: 332 MEKIGVELNIYTYNTLACGLCRMGVVPNY 360
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
+KD R+ ++ + M ++G T+GTY +L+++L+ + + E L+ ++ +++ G +
Sbjct: 179 QKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYL 238
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ +I+ Y G + ++ + GV PN ++ F K+G ++ E L
Sbjct: 239 -YTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEML 293
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M+ KG TY +L+ + G + A EL+ ++ + GT + +K+IS +RG
Sbjct: 359 MMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEM-CNKGYGTTTVTCNKIISELCSRG 417
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
++ FE+F M E G++ + + + F K G +D+
Sbjct: 418 KSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDE 456
>gi|15222438|ref|NP_172238.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163930|sp|Q940Q2.1|PPR19_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07590, mitochondrial; Flags: Precursor
gi|15809864|gb|AAL06860.1| At1g07590/F22G5_2 [Arabidopsis thaliana]
gi|332190025|gb|AEE28146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 534
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKI-FLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFA 183
+Y L A A G LD AEELW ++ + L+ T + F+ ++S+Y G+ EK +F
Sbjct: 342 SYLLATEAFARVGNLDRAEELWLEMKNVKGLKETEQ--FNSLLSVYCKDGLIEKAIGVFR 399
Query: 184 DMEELGVRPN 193
+M G +PN
Sbjct: 400 EMTGNGFKPN 409
>gi|115447457|ref|NP_001047508.1| Os02g0633200 [Oryza sativa Japonica Group]
gi|49388176|dbj|BAD25302.1| membrane-associated salt-inducible protein like [Oryza sativa
Japonica Group]
gi|113537039|dbj|BAF09422.1| Os02g0633200 [Oryza sativa Japonica Group]
gi|125540409|gb|EAY86804.1| hypothetical protein OsI_08180 [Oryza sativa Indica Group]
gi|125582977|gb|EAZ23908.1| hypothetical protein OsJ_07630 [Oryza sativa Japonica Group]
gi|215693356|dbj|BAG88738.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 455
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168
+V M +G T Y +++++ + ++++AE LW K L+ + ++ I
Sbjct: 197 EVLDQMRGQGFTPTNSIYTTMIDSMYKQKKMEQAERLW-KQMLESGRKPDQAVYNTKIMH 255
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ G E + E+ A+MEE GV+P+ + + ++ K G ++ ++L
Sbjct: 256 HSLHGKTEDVLEVIAEMEEAGVKPDTITYNFLMTSYCKHGKMETAKEL 303
>gi|449459510|ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
gi|449530101|ref|XP_004172035.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
Length = 680
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
+ LA+ GR++EA ++ + F D E F+ MI ++ H+ + E+F M +G
Sbjct: 512 ITILAKAGRIEEATWVFRQAF-DAGELKDISVFECMIDLFSRNKKHKNVLEVFEKMRNVG 570
Query: 190 VRPNVSIVSMMGNAFQKLGMLDKYEKL 216
PN +++++ NA+ KL D + L
Sbjct: 571 HFPNSDVIALVLNAYGKLRDFDTADAL 597
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEG---TPRIF-FDKMISIYYNRGMHEKMFE 180
TY LL++A GR + A +I L +E P F F ++++ + +RG +K F+
Sbjct: 376 TYSLLIDAYVNAGRWESA-----RIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQ 430
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
+ +M+ +GV+P+ +++ + F K LD
Sbjct: 431 VLKEMKSIGVKPDRQFYNVVIDTFGKFNCLD 461
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 59/126 (46%), Gaps = 4/126 (3%)
Query: 93 KALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD 152
+ L + +W++ QV K M S G Y ++++ + LD A + ++ +
Sbjct: 414 RLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE 473
Query: 153 HLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+E R+ ++ +I + G H E+F ME G P + ++M N++ G ++
Sbjct: 474 GIE-PDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSY---GDQER 529
Query: 213 YEKLKK 218
++ +K+
Sbjct: 530 WDDMKR 535
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 66/134 (49%), Gaps = 7/134 (5%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T L + + ++V + M + G T TY L++A A+ G L+EA +L T+
Sbjct: 300 VTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQ 359
Query: 149 IFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNV----SIVSMMGNA 203
+ H P +F + ++S + G + ++F +M +G +PN+ +++ M GN
Sbjct: 360 MV--HKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNR 417
Query: 204 FQKLGMLDKYEKLK 217
+ M+ ++ +K
Sbjct: 418 GKFAEMMKVFDDIK 431
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 5/134 (3%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
+IT + L R I + M +G T+ +LL+ L + GRL +A+E +
Sbjct: 409 VITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQ 468
Query: 148 KIFLD--HLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQ 205
+ HL+ ++ MI+ + +G+ E+ + + MEE G PN ++ NA
Sbjct: 469 DLLTKGYHLDVYK---YNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALF 525
Query: 206 KLGMLDKYEKLKKK 219
K DK EKL ++
Sbjct: 526 KKDENDKAEKLLRQ 539
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 12/130 (9%)
Query: 107 IIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKM 165
+Q+TK G ++ TY L++ + +DGRLD A ++ +++ D TP + + M
Sbjct: 437 FLQMTKC----GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD--SCTPNVVTYTAM 490
Query: 166 ISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG----MLDKYEKLKKKYP 221
I G EK ++ + MEE G PNV + + + K G LD + ++ +K
Sbjct: 491 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC 550
Query: 222 PPKW-EYRYI 230
P + YR +
Sbjct: 551 SPNYVTYRVL 560
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 72/142 (50%), Gaps = 7/142 (4%)
Query: 75 ALDSF--IAWELEFP-LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLN 131
A+D F +A + FP L T L +L ++++ +V + M S+G + ++ ++N
Sbjct: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVM-SEGACPDVFSFTNVIN 251
Query: 132 ALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGV 190
AL + G+++ A EL+ K ++ L +P + ++ +I+ G + FE+ M GV
Sbjct: 252 ALCKGGKMENAIELFMK--MEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGV 309
Query: 191 RPNVSIVSMMGNAFQKLGMLDK 212
+PN+ + N KL DK
Sbjct: 310 QPNLKTYGALINGLIKLNFFDK 331
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEG-TPRIF-FDKM 165
+ V + KG ++ T LL++L + ++ E +F EG P +F F +
Sbjct: 194 VDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCE----VFRVMSEGACPDVFSFTNV 249
Query: 166 ISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
I+ G E E+F ME+LG+ PNV + + N + G LD +LK+K
Sbjct: 250 INALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEK 303
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY ++N L ++GRLD A EL K+ + ++ + + +I+ +K+ + +
Sbjct: 280 TYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTY-GALINGLIKLNFFDKVNHVLDE 338
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLK 217
M G PNV + + + + + K+G ++ K+K
Sbjct: 339 MIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIK 371
>gi|357127910|ref|XP_003565620.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
mitochondrial-like [Brachypodium distachyon]
Length = 1088
Score = 42.7 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 122 TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEI 181
T+ TY +L+ AL +G LD+A +L K+ + T R+ ++ +IS Y N G+ EK +
Sbjct: 788 TIITYAILIGALCREGFLDDAYQLIQKMSNKGIRPTTRV-YNLLISGYCNYGLTEKALGL 846
Query: 182 FADMEELGVRPNV----SIVS---MMGNAFQKLGMLDKY 213
+ EE + P+ S+++ + GN LG ++Y
Sbjct: 847 MSHFEEHFLLPDAFTLGSVINGHCLKGNTEAALGFFNEY 885
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY +L+N L ++G+LD+A +L+ ++ D + F +I+ + G + EI+
Sbjct: 297 TYSVLINGLCKEGQLDDANKLFLEM-CDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQ 355
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL-----KKKYPPPKWEY 227
M GV+P+V + + N K+G L + +KL ++ P K+ Y
Sbjct: 356 MLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTY 403
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/116 (20%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163
WK ++++ M G TY L++ EA +++ ++ E ++ F+
Sbjct: 224 WKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFE-PDKVTFN 282
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
++ +Y H++ E+ +ME +G P+V + + +++ K G+L++ LK++
Sbjct: 283 SLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQE 338
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEG---TPRIF-FDKMISIYYNRGMHEKMFE 180
TY LL++A GR + A +I L +E P F F ++++ + +RG +K F+
Sbjct: 347 TYSLLIDAYVNAGRWESA-----RIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQ 401
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
+ +M+ +GV+P+ +++ + F K LD
Sbjct: 402 VLKEMKSIGVKPDRQFYNVVIDTFGKFNCLD 432
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 59/126 (46%), Gaps = 4/126 (3%)
Query: 93 KALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD 152
+ L + +W++ QV K M S G Y ++++ + LD A + ++ +
Sbjct: 385 RLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE 444
Query: 153 HLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+E R+ ++ +I + G H E+F ME G P + ++M N++ G ++
Sbjct: 445 GIE-PDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSY---GDQER 500
Query: 213 YEKLKK 218
++ +K+
Sbjct: 501 WDDMKR 506
>gi|356570295|ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Glycine max]
Length = 516
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY L+ L + G++DEA++L+ +I HL T + F + + E++FE+
Sbjct: 311 TYNSLIKPLCKAGKVDEAKQLFYEILKRHLSPTIQTFH----AFFRILRTKEEVFELLDK 366
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
M+ELG P + M+ F + LD K+
Sbjct: 367 MKELGCYPTIETYIMLMRKFCRWRQLDDVFKM 398
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI-FFDKMISIYYNR 172
M +G + TY L+N+L ++ RLD ++ +K+ + TP + + MI
Sbjct: 670 MSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLEN--SCTPNVVIYTDMIDGLCKV 727
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG----MLDKYEKLKKKYPPPKW-EY 227
G E+ + + MEE+G PNV + M + F K+G L+ Y + K P + Y
Sbjct: 728 GKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITY 787
Query: 228 RYI 230
R +
Sbjct: 788 RVL 790
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 63/148 (42%), Gaps = 4/148 (2%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
L T + +L EK +++V ML + Y +++ L + G+ +EA L
Sbjct: 679 LYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLML 738
Query: 148 KIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
K ++ + P + + MI + G E+ E++ DM G PN ++ N
Sbjct: 739 K--MEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCS 796
Query: 207 LGMLDKYEKLKKKYPPPKWEYRYIKGKR 234
G+LD+ +L + W R+I R
Sbjct: 797 TGLLDEAHRLLDEMKQTYWP-RHISSYR 823
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY L++ L + R++EA EL + ++ E +I +D +I + G E E+F
Sbjct: 611 TYGALVDGLCKANRVEEAHELLDTMSVNGCEPN-QIVYDALIDGFCKTGKLENAQEVFVK 669
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
M E G PN+ S + N+ K LD K+ K
Sbjct: 670 MSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSK 704
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 42.7 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 15/113 (13%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
T+ L+ A A GR+ +A L+ D + + + M++ Y G + +FA
Sbjct: 279 TFNTLITAYARAGRVTDARALF-----DEMPARNAVSWSAMVNGYVQAGDGREALGLFAR 333
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRI 237
M+ GVRP+ +++ + A +LG+L++ KW + Y+K +RI
Sbjct: 334 MQADGVRPDDTVLVGVLAACAQLGVLEQ----------GKWVHGYLKANNIRI 376
>gi|449521499|ref|XP_004167767.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g02830, chloroplastic-like [Cucumis sativus]
Length = 855
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 100 NEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR 159
N D Q+ K M + G M +Y +LL A GR+D A++++ ++ HLE T
Sbjct: 306 NAHDLNYTFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYREV--KHLETTGV 363
Query: 160 IFFD-----KMISIYYNRGMHEKMFEIFADMEELGVRPNV----SIVSMMGNA 203
+ D ++ ++ + + + + DM+ GV PN+ S++S N+
Sbjct: 364 LKLDVFTYSTIVKVFADAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCANS 416
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163
WK ++++ + M + G TY LLN L +GR EA + + ++ I +
Sbjct: 289 WKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAI-YG 347
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKKK 219
+I Y +G +M ++ M E G+ P+ I +++ A+ K M+D+ + K+K++
Sbjct: 348 ILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQ 407
Query: 220 YPPP 223
P
Sbjct: 408 GLSP 411
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 85/205 (41%), Gaps = 29/205 (14%)
Query: 19 KISRNARSLVVCAARGPRP---RYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGA 75
+I A+SL V + G +P Y + R G I ++ YG
Sbjct: 533 RIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRI-----------------DDAYGV 575
Query: 76 LDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAE 135
+ + ++T L L + + ++ M++ G+ + Y ++LN L++
Sbjct: 576 FREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSK 635
Query: 136 DGRLDEA----EELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVR 191
+ +DEA + L +K F LE T F+ MI + G +E +FA + G+
Sbjct: 636 NNCVDEAFKLFQSLCSKDF--QLEITT---FNIMIGALFKSGRNEDAMHLFATISSYGLV 690
Query: 192 PNVSIVSMMGNAFQKLGMLDKYEKL 216
P+V ++ + G L++++ L
Sbjct: 691 PDVFTYCLIAENLIEEGYLEEFDDL 715
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M+ KG + Y +L++ A G L E +L + + L IF + + + Y +
Sbjct: 334 MIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIF-NIIFTAYAKKA 392
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
M ++ IF M++ G+ P+V + +A KLG +D
Sbjct: 393 MIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVD 430
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY +L+N + G+++ AE L + + G +I F+ MI Y +GM + +I A
Sbjct: 110 TYGVLINGFCKIGQMEAAEMLLADMQGQGV-GLNQIIFNTMIDGYCRKGMVDDALKIKAA 168
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
ME++GV ++ + + ++ LD+ + L
Sbjct: 169 MEKMGVELDIYTYNTLACGLCRVNRLDEAKTL 200
>gi|356498877|ref|XP_003518274.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g09900-like [Glycine max]
Length = 395
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 15/98 (15%)
Query: 61 CIKGLS----NVKEEV--YGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWM 114
C+KGL NV E + +G +F ++ PLI + NEK R I+ ++ M
Sbjct: 147 CLKGLLGKALNVLEMMPKHGCTPNFRSYN---PLI------EGFCNEKSADRTIEYSRIM 197
Query: 115 LSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD 152
+S+G TY +LL AL +DG++D+A E+ ++ L+
Sbjct: 198 VSRGCYLDTVTYNILLTALCKDGKVDDAIEILNQLSLN 235
>gi|356528278|ref|XP_003532731.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Glycine max]
Length = 1079
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
Query: 110 VTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIY 169
+ + M+S G ++ T+ +++ +D +LD A E++ + + + + + +I Y
Sbjct: 809 IFEHMISSGVAPSIETFNTMISVYGQDQKLDRAVEMFNQASSCSVPLDEKTYMN-LIGYY 867
Query: 170 YNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL-----KKKYPPPK 224
G+ + ++F+ M+E G++P ++M N + G+L + EKL ++ Y P
Sbjct: 868 GKAGLMLEASQLFSKMQEGGIKPGKVSYNIMINVYANAGVLHETEKLFHTMQRQGYLPDS 927
Query: 225 WEY 227
+ Y
Sbjct: 928 FTY 930
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 84/186 (45%), Gaps = 15/186 (8%)
Query: 33 RGPRPRYPRVWKAR-----------KRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIA 81
+GP+ + PR W R R G + ++ +K + ++ + V G D +
Sbjct: 96 QGPQAQTPR-WIKRTPEQMVRYLQDDRNGQLY-GRHVLAAVKKVRSLSQRVDGDYDMRMV 153
Query: 82 WELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGR-TMGTYFLLLNALAEDGRLD 140
++ K+ L+ +K W+++ WM + R ++ Y ++L + G+L
Sbjct: 154 MASFVGKLSFKEMCVVLKEQKGWRQVRDFFAWMKLQLSYRPSVIVYTIVLRLYGQVGKLK 213
Query: 141 EAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMM 200
AEE++ ++ LD + M+ Y G H+ M ++ ++E G+ +V++ + M
Sbjct: 214 LAEEIFLEM-LDVGCEPDEVACGTMLCSYARWGRHKAMLSFYSAIKERGIILSVAVFNFM 272
Query: 201 GNAFQK 206
++ QK
Sbjct: 273 MSSLQK 278
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L EK R I+ + M+S+G + TY LL AL +DG++D A E+ + L
Sbjct: 390 LHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQ--LSSK 447
Query: 155 EGTP-RIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKY 213
+P I ++ +I G E E+ +M G++P++ S + + G +D+
Sbjct: 448 GCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEA 507
Query: 214 EKL 216
K+
Sbjct: 508 IKI 510
>gi|414880641|tpg|DAA57772.1| TPA: hypothetical protein ZEAMMB73_835994 [Zea mays]
Length = 728
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M +G T+ TY LL+ L G ++ E W K +D G R+ F +I G
Sbjct: 514 MKREGLKPTLETYTALLDTLRRAGDTEKLMETW-KTMVDEKFGGTRVIFHMVIDCLAKHG 572
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
++ ++ ++ + ++G++P V +++ NA+ + G K +L K+
Sbjct: 573 LYLQVRDVIYEFGKMGLKPTVMTYNILMNAYGRGGQHYKLPQLLKE 618
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163
WK ++ + M G R TY L++ G EA +++ ++ E ++ F+
Sbjct: 236 WKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFE-PDKVTFN 294
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
++ +Y HE+ + ME G P+V + + +A+ K G+L++ +LK++
Sbjct: 295 SLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQE 350
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 5/158 (3%)
Query: 62 IKGLSNVK--EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQ 119
IKGL V EE G L +T + E + ++ I+V M KG
Sbjct: 375 IKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434
Query: 120 GRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKM 178
+ T+ L++ + G+++ A L+T++ + L P + + +I ++ G ++
Sbjct: 435 EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL--LPDVVAYTALIDGHFKDGNTKEA 492
Query: 179 FEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
F + +M+E G+ PNV +S + + K G + KL
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530
>gi|449448705|ref|XP_004142106.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 100 NEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR 159
N D Q+ K M + G M +Y +LL A GR+D A++++ ++ HLE T
Sbjct: 306 NAHDLNYTFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYREV--KHLETTGV 363
Query: 160 IFFD-----KMISIYYNRGMHEKMFEIFADMEELGVRPNV----SIVSMMGNA 203
+ D ++ ++ + + + + DM+ GV PN+ S++S N+
Sbjct: 364 LKLDVFTYSTIVKVFADAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCANS 416
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 84/228 (36%), Gaps = 37/228 (16%)
Query: 17 PIKISRNARSLVVCAARGPRPRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYG-- 74
P +I+ N L +C +G RV++ K G T I ++
Sbjct: 453 PNRITWNTM-LSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEK 511
Query: 75 ALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALA 134
D + + T L L DW+ V K M +KG + +Y L+LN+ A
Sbjct: 512 IYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYA 571
Query: 135 EDGRLDEAEELWTKIFLDH--------------------LEGTPRIF------------- 161
+ G + + I+ H L G R F
Sbjct: 572 KGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYKPDLV 631
Query: 162 -FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
F+ M+S++ + MH++ EI ++E G++P++ + + + + + G
Sbjct: 632 VFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGG 679
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 66/160 (41%), Gaps = 38/160 (23%)
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI------------ 149
+ W +I+ + M SKG G T +++A +G LDEA+E + +
Sbjct: 259 RSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTY 318
Query: 150 -FLDHLEGTPRIF---------------------FDKMISIYYNRGMHEKMFEIFADMEE 187
L + G I+ ++++++ Y G +E+ + M E
Sbjct: 319 NALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTE 378
Query: 188 LGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKKKYPPP 223
G++PN + M NA+ + +DK Y+++K+ P
Sbjct: 379 NGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAP 418
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY +L+N L ++G+LD+A +L+ ++ D + F +I+ + G + EI+
Sbjct: 297 TYSVLINGLCKEGQLDDANKLFLEM-CDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQ 355
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL-----KKKYPPPKWEY 227
M GV+P+V + + N K+G L + +KL ++ P K+ Y
Sbjct: 356 MLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTY 403
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 67/143 (46%), Gaps = 1/143 (0%)
Query: 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL 129
E V G L + L + T ++ L + K M G G + TY +L
Sbjct: 244 ETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVL 303
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++AL G+L+ A+EL+ K+ R+ + ++ + + G + + E +++ME G
Sbjct: 304 IDALCNAGKLNNAKELFLKMKASS-HKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADG 362
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+V +++ +A K+G +D+
Sbjct: 363 YLPDVVTFTILIDALCKVGKVDE 385
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/116 (20%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163
WK ++++ M G TY L++ EA +++ ++ E ++ F+
Sbjct: 224 WKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFE-PDKVTFN 282
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
++ +Y H++ E+ +ME +G P+V + + +++ K G+L++ LK++
Sbjct: 283 SLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQE 338
>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
Length = 859
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 19/123 (15%)
Query: 114 MLSKGQGRTMGTYF----------------LLLNALAEDGRLDEAEELWTKIFLDHLEGT 157
++ KG+GR F +++NA + GR+D A E+ K+ + LE
Sbjct: 201 LVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLE-- 258
Query: 158 PRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
P + ++ +++ Y RG E + + M E GV NV +M+ + K G +D+ EKL
Sbjct: 259 PNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKL 318
Query: 217 KKK 219
++
Sbjct: 319 LRE 321
>gi|356577031|ref|XP_003556633.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15820-like [Glycine max]
Length = 737
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 17/129 (13%)
Query: 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTY 126
+V +E+YG L W L + ++ D +RI ++ + ML G
Sbjct: 252 DVHKEIYGGL----IW------------LHSYQDSIDKERIAELREAMLRAGFEEDREVL 295
Query: 127 FLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADME 186
+L A A +G +DEAE+ W K+ L P + F + +Y GM K +IF +M+
Sbjct: 296 LSILRACAREGEVDEAEKTWVKL-LKFESEPPALAFVYKMEVYSKVGMPMKSLDIFREMQ 354
Query: 187 ELGVRPNVS 195
R +V+
Sbjct: 355 SKLGRTDVA 363
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 36/161 (22%)
Query: 87 PLITVKKAL-KTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEEL 145
P+++V AL L E+D+K +++ M+ KG + +Y L+N L+ G+++ A L
Sbjct: 243 PVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSL 302
Query: 146 WTKIF---------------------------LDHLEGTPRIF--------FDKMISIYY 170
++ LD R F ++ ++ +
Sbjct: 303 LAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFC 362
Query: 171 NRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
+ G +K +F MEE+G PN+ + N F K G L+
Sbjct: 363 SHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLE 403
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
T+ +++ LA DG++D + L ++ L + +F +IS+Y G+ E+ E+F
Sbjct: 77 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFIS-VISVYRQVGLAERAVEMFYR 135
Query: 185 MEELGVRPNVSI 196
++E G P+V I
Sbjct: 136 IKEFGCDPSVKI 147
>gi|8778536|gb|AAF79544.1|AC022464_2 F22G5.3 [Arabidopsis thaliana]
Length = 555
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKI-FLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFA 183
+Y L A A G LD AEELW ++ + L+ T + F+ ++S+Y G+ EK +F
Sbjct: 363 SYLLATEAFARVGNLDRAEELWLEMKNVKGLKETEQ--FNSLLSVYCKDGLIEKAIGVFR 420
Query: 184 DMEELGVRPN 193
+M G +PN
Sbjct: 421 EMTGNGFKPN 430
>gi|356547249|ref|XP_003542028.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI-FFDKMISIYYNRGMHEKMFEIFA 183
+Y L + A G+L++AEELW + ++ +G + F+ M+S+Y G K +++
Sbjct: 315 SYMLAIEAFGRIGQLNQAEELWLE--MESTKGLKSVEQFNSMMSVYCKHGFIGKAAKLYK 372
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+M+ G +PN + K GM ++
Sbjct: 373 NMKASGCKPNAITYRQLALGCLKSGMAEQ 401
>gi|440800754|gb|ELR21789.1| pentatricopeptide repeat domain/PPR repeatcontaining protein
[Acanthamoeba castellanii str. Neff]
Length = 559
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 120 GRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEG----------TPRIFFDKMISIY 169
G T Y +L+ E+ R D A +L+ DHL P FD ++ Y
Sbjct: 54 GPTGAKYEMLIEQCFEEKRPDLATQLY-----DHLRAETTTTQAAAPVPLAVFDVLLQGY 108
Query: 170 YNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML 210
G +++ ++ DM E+GVRP +S +++ +A+ K G L
Sbjct: 109 GRAGDRQRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDL 149
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 4/133 (3%)
Query: 87 PLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELW 146
PL L+ D +R+ QV + M G M TY +L++A + G L + W
Sbjct: 97 PLAVFDVLLQGYGRAGDRQRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDLRRMWQAW 156
Query: 147 TKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL---GVRPNVSIVSMMGNA 203
+ L + + +I+ G M FA+M+ GV PN + + M ++
Sbjct: 157 EDMREQGLRPNV-VVYTSVIATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVHS 215
Query: 204 FQKLGMLDKYEKL 216
+ + M+DK E L
Sbjct: 216 YGQQQMMDKMEAL 228
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M+ G T+ TY L+N L +GR+ +AE+L+ ++ I ++ +IS Y
Sbjct: 526 MIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCN-PDVITYNSLISGYAKSV 584
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGM--LDKY--EKLKKKYPPPKWEY 227
+K E++ M+ LG++P V + A +K G+ +DK E L+ P ++ Y
Sbjct: 585 NTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVY 642
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP-RIFFDKMISIYYNRGMHEKMFEIFA 183
TY +LLN L GR+++AEE+ K+ + + TP +I ++ +++ Y G +K
Sbjct: 327 TYCILLNGLCRVGRIEKAEEVLAKLVENGV--TPSKISYNILVNAYCQEGDVKKAILTTE 384
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYE 214
MEE G+ PN + + + F + G +D E
Sbjct: 385 QMEERGLEPNRITFNTVISKFCETGEVDHAE 415
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
E D K+ I T+ M +G T+ +++ E G +D AE W + ++
Sbjct: 373 EGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAET-WVRRMVEKGVSPTVE 431
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNV 194
++ +I+ Y +G + FE +M++ G++PNV
Sbjct: 432 TYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNV 465
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFF 162
D +V M +KG R +Y +++ L E GR+DE L+ K+ D T R +
Sbjct: 264 DVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYT 323
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ +++ N E M ++F +M E PNV ++M +A K LD+ ++
Sbjct: 324 VIIHALFGNDRNLEGM-DLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRI 376
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY +L++ L ++GRLD AE+L+ ++ L F + Y +R M M +
Sbjct: 295 TYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAM-NTYHQ 353
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
M +GV+P++ + + + N K+G ++K KL
Sbjct: 354 MLTMGVKPDLVMYNTLLNGLCKVGDVNKARKL 385
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168
+V ML G + TY L++ L +D RLD A ++ TK+ L++ + + +M+
Sbjct: 335 EVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKM-LENSCAPNVVIYTEMVDG 393
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
G ++ + + MEE G PNV + M + F K G +D+ +L
Sbjct: 394 LCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLEL 441
>gi|242091205|ref|XP_002441435.1| hypothetical protein SORBIDRAFT_09g026630 [Sorghum bicolor]
gi|241946720|gb|EES19865.1| hypothetical protein SORBIDRAFT_09g026630 [Sorghum bicolor]
Length = 664
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 3/138 (2%)
Query: 82 WELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDE 141
W+L + + ++ L+N + ++ ++ M G G TY LL+ A R+D+
Sbjct: 356 WKLVPDVASYNNLIRHLQNNQLIDKVEELYSEMCESGVGADEETYLLLMEACFSVDRIDD 415
Query: 142 AEELWTKIFLDHLEGTP-RIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMM 200
+ K +D LE P + K++ M +K E F M+E GV P++S +
Sbjct: 416 GISYFDK--MDELELKPDATAYHKLVDGLVGFSMVDKAQEYFDQMKEKGVSPSISSYETL 473
Query: 201 GNAFQKLGMLDKYEKLKK 218
A+ LD K+ K
Sbjct: 474 LKAYIAADRLDDAVKVAK 491
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 42.4 bits (98), Expect = 0.24, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 15/113 (13%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
T+ L+ A A GR+ +A L+ D + + + M++ Y G + +FA
Sbjct: 279 TFNTLITAYARAGRVTDARALF-----DEMPARNAVSWSAMVNGYVQAGDGREALGLFAR 333
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRI 237
M+ GVRP+ +++ + A +LG+L++ KW + Y+K +RI
Sbjct: 334 MQADGVRPDDTVLVGVLAACAQLGVLEQ----------GKWVHGYLKANNIRI 376
>gi|297743170|emb|CBI36037.3| unnamed protein product [Vitis vinifera]
Length = 646
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 5/163 (3%)
Query: 50 GTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQ 109
G+IS L+ G ++V+ D W+L+ T K L+ + + +
Sbjct: 191 GSISTINILIGIFGGGADVER----CFDLVKKWDLQMNCYTYKCLLQAHLRSNNSNKAFE 246
Query: 110 VTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIY 169
V + +G + Y +LL+ALA+D ++D+ ++ + H E + MI +
Sbjct: 247 VYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCE-PDEYTYTIMIRMT 305
Query: 170 YNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
G ++ +F +M E G PN+ + M A M+DK
Sbjct: 306 GKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDK 348
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 42.4 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 105 KRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDK 164
K ++ + M+S+G + TY L++ L + G+ DE ++ D+L + +
Sbjct: 326 KELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLS-LNGVTYTV 384
Query: 165 MISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
+I ++ ++ +MEE + PNV S + N F K G+LDK + K+
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKR 438
Score = 41.6 bits (96), Expect = 0.43, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 5/169 (2%)
Query: 42 VWKARKRIGTISKSAKLVTCIKGLSNVK--EEVYGALDSFIAWELEFPLITVKKALKTLE 99
+++ ++G + T I L+ +E+ L ++ + L+T + L
Sbjct: 296 LFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLG 355
Query: 100 NEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR 159
+ + ++ LS TY +L++AL + +DEAE++ + ++ +P
Sbjct: 356 KQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLE--MEEKSISPN 413
Query: 160 IF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+ F +I+ + RG+ +K E M+E G+ PNV + + F K
Sbjct: 414 VVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163
WK ++Q+ + M + G Y +LL+ L ++GR EA ++ + ++ I +
Sbjct: 253 WKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTI-YG 311
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKKK 219
++ Y G +M M GV P+ I ++M A+ K M+D+ ++K++++
Sbjct: 312 ILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQ 371
Query: 220 YPPP 223
P
Sbjct: 372 RLSP 375
>gi|449479004|ref|XP_004155478.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 259
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 120 GRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMF 179
R Y LL+ E+ L +AE + K+ TP + ++ M+++Y G HEK+
Sbjct: 134 SRDHKVYGALLHCYVENKNLKKAEAIMQKMREVGFMKTP-LSYNAMLNLYAQLGKHEKLD 192
Query: 180 EIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
E+ +MEE+G+ N ++ NA+ + EKL K
Sbjct: 193 ELVKEMEEMGIGHNRFTYNVRMNAYAAASDITNMEKLLSK 232
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/116 (20%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163
WK ++++ M G TY L++ EA +++ ++ E ++ F+
Sbjct: 206 WKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFE-PDKVTFN 264
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
++ +Y H++ E+ +ME +G P+V + + +++ K G+L++ LK++
Sbjct: 265 SLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQE 320
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 113 WMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD--HLEGTPRIFFDKMISIYY 170
WM+ G +GTY ++L L ++ D+A ++ ++L HLE F+ MI
Sbjct: 613 WMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRT---FNIMIDALL 669
Query: 171 NRGMHEKMFEIFADMEELGVRPNV 194
G H++ ++FA + G+ PNV
Sbjct: 670 KGGRHDEAKDLFASLLARGLVPNV 693
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 3/155 (1%)
Query: 42 VWKARKRIGTISKSAKLVTCIKGLSNVK--EEVYGALDSFIAWELEFPLITVKKALKTLE 99
++ + +G S T I GL K EE +D I L+ T LK
Sbjct: 499 IFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFC 558
Query: 100 NEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR 159
+ D KR + + M G + TY L+ L + GR+D A +L + + + TP+
Sbjct: 559 QQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQ 618
Query: 160 IFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNV 194
++ +I R ++ +F +M E G P+V
Sbjct: 619 A-YNPVIQALCKRKRTKEAMRLFREMMEKGDPPDV 652
>gi|449503889|ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Cucumis sativus]
Length = 697
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
Query: 94 ALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDH 153
+ L K R ++ + + ++G + TY L+ +G +D+A+EL +
Sbjct: 480 VIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESR 539
Query: 154 LEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
P IF F+ +I HE F F +M E V PNV +++ +F +G + +
Sbjct: 540 FR--PDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSR 597
Query: 213 YEKLKKK 219
L ++
Sbjct: 598 STHLLRQ 604
>gi|115445137|ref|NP_001046348.1| Os02g0226900 [Oryza sativa Japonica Group]
gi|49388538|dbj|BAD25660.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|49388672|dbj|BAD25856.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535879|dbj|BAF08262.1| Os02g0226900 [Oryza sativa Japonica Group]
Length = 637
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L+ L N + I + M KG +G Y ++ +AL + ++ L+ K+ + +
Sbjct: 400 LEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGI 459
Query: 155 EGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKY 213
P +F ++ MIS Y G+ +K E+F ME +P+V + + N K G LD+
Sbjct: 460 --IPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEA 517
Query: 214 EKL-----KKKYPPPKWEY 227
L +K Y P + Y
Sbjct: 518 HMLFKEMQEKGYDPDVFTY 536
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 65/132 (49%), Gaps = 3/132 (2%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T + +D V K M+S G + TY LL+ L ++G+L++A ++
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE- 494
Query: 149 IFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+L + P I+ ++ MI G E +++F + GV+P+V I + M + F +
Sbjct: 495 -YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK 553
Query: 208 GMLDKYEKLKKK 219
G+ ++ + L +K
Sbjct: 554 GLKEEADALFRK 565
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 107 IIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMI 166
+ ++ K M+S+ TY +++++LA+ LD+A + + + TPR + +I
Sbjct: 842 LFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTY-GPLI 900
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
G E+ +F +M + G +PN +I +++ N + K+G
Sbjct: 901 DGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIG 942
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
L T + L ++D + ++ + K M G + T+ + + L G++DEA E++
Sbjct: 227 LKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFR 286
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
++ D G + + +I N G E E+F M+ G +P+ I + + F
Sbjct: 287 RMD-DEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDF 345
Query: 208 GMLDKYEKL 216
G LD +++
Sbjct: 346 GDLDTFKEF 354
>gi|359482557|ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710
[Vitis vinifera]
Length = 990
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 5/163 (3%)
Query: 50 GTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQ 109
G+IS L+ G ++V+ D W+L+ T K L+ + + +
Sbjct: 8 GSISTINILIGIFGGGADVER----CFDLVKKWDLQMNCYTYKCLLQAHLRSNNSNKAFE 63
Query: 110 VTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIY 169
V + +G + Y +LL+ALA+D ++D+ ++ + H E + MI +
Sbjct: 64 VYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCE-PDEYTYTIMIRMT 122
Query: 170 YNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
G ++ +F +M E G PN+ + M A M+DK
Sbjct: 123 GKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDK 165
>gi|414888175|tpg|DAA64189.1| TPA: hypothetical protein ZEAMMB73_647521 [Zea mays]
Length = 667
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 79/178 (44%), Gaps = 12/178 (6%)
Query: 39 YPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTL 98
+P +W + + K +L +K L N+ + G ++T + L
Sbjct: 263 FPDIWACNIYVDCLCKHNRLHDALKTLENM--WIRGT---------NPDVVTYTTVVGCL 311
Query: 99 ENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP 158
+ K + +++ + M+ +G + +L+ L + ++DEA EL ++ +LE
Sbjct: 312 CDNKQFAEAVELWEEMVRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNV 371
Query: 159 RIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
I+ + +IS + G K F+I + M G P+V ++ N + GM+ + EKL
Sbjct: 372 CIY-NALISGFLRSGSINKAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKL 428
>gi|449433429|ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g16890, mitochondrial-like
[Cucumis sativus]
Length = 688
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
Query: 94 ALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDH 153
+ L K R ++ + + ++G + TY L+ +G +D+A+EL +
Sbjct: 471 VIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESR 530
Query: 154 LEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
P IF F+ +I HE F F +M E V PNV +++ +F +G + +
Sbjct: 531 FR--PDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSR 588
Query: 213 YEKLKKK 219
L ++
Sbjct: 589 STHLLRQ 595
>gi|302756053|ref|XP_002961450.1| hypothetical protein SELMODRAFT_76818 [Selaginella moellendorffii]
gi|300170109|gb|EFJ36710.1| hypothetical protein SELMODRAFT_76818 [Selaginella moellendorffii]
Length = 224
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAE------------ 135
++T + L K ++++ ++ K M+S G + TY +L+ LA
Sbjct: 38 VVTYTMLMSLLTKLKRFRQVGEIFKDMVSGGCRPNVRTYTVLIQCLASSGNLDAALLSLG 97
Query: 136 -DGRLDEAEELWTKIFLDHLEGTPRIF-FDKMIS--IYYNRGMHEKMFEIFADMEELGVR 191
+G++D AE L K+ L+ + P + + +I+ I+Y R H +F M++ GV
Sbjct: 98 REGKIDAAEHLLEKMPLNGCK--PNVVNYTSLINSLIHYGRVSHA--LAVFKRMQDEGVM 153
Query: 192 PNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPK-WEYRYIK 231
PN S+M ++ ML +++KK W+ + +K
Sbjct: 154 PNSITYSLMSKGLKRANMLHDLVEVEKKMATIDFWKQQRVK 194
>gi|357150350|ref|XP_003575429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Brachypodium distachyon]
Length = 684
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 13/108 (12%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT---PRIF-FDKMISIYYNRGMHEKMFE 180
TY L++ + + G +DEA L + +EG P +F + ++ + N G E
Sbjct: 213 TYNTLVHGVCQRGIIDEALRL-----VRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVH 267
Query: 181 IFADMEELGVRPN-VSIVSMMGNAFQKLGMLDKYEKLKK---KYPPPK 224
+F M+E GV PN S +++ AF+ LG Y L + + PPP
Sbjct: 268 VFDTMKEKGVSPNEASYRTLVHGAFRCLGRHKAYVMLTEWLGREPPPH 315
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 107 IIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMI 166
+ ++ K M+S+ TY +++++LA+ LD+A + + + TPR + +I
Sbjct: 842 LFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTY-GPLI 900
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
G E+ +F +M + G +PN +I +++ N + K+G
Sbjct: 901 DGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIG 942
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
L T + L ++D + ++ + K M G + T+ + + L G++DEA E++
Sbjct: 227 LKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFR 286
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
++ D G + + +I N G E E+F M+ G +P+ I + + F
Sbjct: 287 RMD-DEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDF 345
Query: 208 GMLDKYEKL 216
G LD +++
Sbjct: 346 GDLDTFKEF 354
>gi|357162065|ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Brachypodium distachyon]
Length = 858
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
TY L+N + GRLD L + + P + + +I IY GMH F ++
Sbjct: 446 TYNSLINGYGKQGRLDIVSFLVQDMRRRGV--APSVLTYSTLIDIYSKAGMHGDAFNVYL 503
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLD 211
D +E G++P+V + S + K G+++
Sbjct: 504 DFKESGLKPDVVLFSSFIDTLAKNGLVE 531
>gi|357153642|ref|XP_003576519.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Brachypodium distachyon]
Length = 620
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L L + + R+ ++ MLS+G ++ TY L+NA +G + +A E+W ++ +
Sbjct: 132 LDGLVKARRFDRVWKLFDEMLSRGMVPSLVTYNTLVNACRHEGDMTKAWEVWNQMVARRI 191
Query: 155 EGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNV 194
+ P + + MI + G + +F M+E GV+PN+
Sbjct: 192 D--PNVVTYSTMICVLCEEGCVIEAERLFIMMKETGVQPNL 230
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Query: 68 VKE--EVYGALDSFIAWELEFP--LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTM 123
VKE EV+G ++ + FP I + L + ++V ML+K T
Sbjct: 241 VKEAREVFGQME-----KCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTE 295
Query: 124 GTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFA 183
TY +L+N+L + G L+ AEEL+ + + + +I + G ++ +F
Sbjct: 296 VTYGILVNSLCKAGTLERAEELFRVMAASGFRPNS-VIYTSLIHGFAKSGRMKEACSLFD 354
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEK 215
+M E G RP+V ++M + K G ++ K
Sbjct: 355 EMVEAGYRPDVITHTVMIDGLCKSGNFEQAAK 386
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 7/151 (4%)
Query: 67 NVKEEVYGALDSFIA----WELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRT 122
N+ +G LD + W L F + K L+ +D + V ML G
Sbjct: 163 NILIGFFGDLDRCVGLVKKWGLRFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLD 222
Query: 123 MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEI 181
+ + +LL+ALA+D ++D+A +++ + H E P F + MI + G ++ +
Sbjct: 223 IFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCE--PDTFTYTIMIRMTGKAGKTDESLAL 280
Query: 182 FADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
F M E G N+ + M A K M DK
Sbjct: 281 FQAMLEKGFTLNLIAYNTMIEALAKGRMADK 311
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Query: 68 VKE--EVYGALDSFIAWELEFP--LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTM 123
VKE EV+G ++ + FP I + L + ++V ML+K T
Sbjct: 241 VKEAREVFGQME-----KCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTE 295
Query: 124 GTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFA 183
TY +L+N+L + G L+ AEEL+ + + + +I + G ++ +F
Sbjct: 296 VTYGILVNSLCKAGTLERAEELFRVMAASGFRPNS-VIYTSLIHGFAKSGRMKEACSLFD 354
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEK 215
+M E G RP+V ++M + K G ++ K
Sbjct: 355 EMVEAGYRPDVITHTVMIDGLCKSGNFEQAAK 386
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 65/140 (46%), Gaps = 5/140 (3%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
+++ + +L W+ ++V M +KG + TY L++ L + G+ DEA L
Sbjct: 44 VVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLA 103
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNV----SIVSMMGNA 203
++ + R ++ +IS G + F +FA+M E G P+ S++ +G
Sbjct: 104 EMRDNGCVPDVRT-YNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKV 162
Query: 204 FQKLGMLDKYEKLKKKYPPP 223
+ ++ E++++ PP
Sbjct: 163 GRSQKAMELLEEMERHGCPP 182
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
TY LLNALA+ G+ +EA+ L+ + L + TP + + +I+ G E E+ A
Sbjct: 11 TYNSLLNALAKAGQCEEAQLLFEE--LKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVA 68
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+M+ G +PN+ + + + K G D+ +L
Sbjct: 69 EMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRL 101
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 8/183 (4%)
Query: 13 KIFEPIKISRNARSLVVCAARGPRPRYPR-VWKARKRIGTISKSAKLVTCIKGLSNVKE- 70
K P I+ NA + RG R + R +++ K G + A + GLS KE
Sbjct: 423 KGLSPDVITYNA--FLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEV 480
Query: 71 -EVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL 129
+ G L I F + + L+ L + + ++ ++ SKG +Y L
Sbjct: 481 DDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNAL 540
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEEL 188
++ALA+ GR+ EA T L G P I + +IS G + FE+ +M +
Sbjct: 541 IDALAKAGRVSEA--FNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKR 598
Query: 189 GVR 191
G++
Sbjct: 599 GLK 601
>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
TY L+NA A +G ++AEE++ ++ D E P ++ ++ ++ Y G EIF+
Sbjct: 290 TYTALVNAFAREGLCEKAEEIFEQLQEDGHE--PDVYAYNALMEAYSRAGFPYGAAEIFS 347
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGM 209
M+ +G P+ + ++M +A+ + G+
Sbjct: 348 LMQHMGCEPDRASYNIMVDAYGRGGL 373
>gi|242062404|ref|XP_002452491.1| hypothetical protein SORBIDRAFT_04g026810 [Sorghum bicolor]
gi|241932322|gb|EES05467.1| hypothetical protein SORBIDRAFT_04g026810 [Sorghum bicolor]
Length = 468
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161
+D + QV M +G T Y L++++ + +EAE LW ++ E P +
Sbjct: 192 RDDAKAKQVLDLMREQGISPTASIYTSLIDSMYKRKMTNEAESLWKEMVESGCE--PDVV 249
Query: 162 FDKMISIYY-NRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKL 216
+ ++YY G E++ E+ +ME G++PN + + ++ K G L+ Y L
Sbjct: 250 TYNVKALYYMAHGKPEEVIEVMTEMEAAGLKPNTITYNYLMISYCKSGKLEDAKVLYHSL 309
Query: 217 KKK 219
+K
Sbjct: 310 AEK 312
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167
++V K ML + + TY L+N L G+++EA + K+ ++ I + +I+
Sbjct: 316 LKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPN-LITYHSLIN 374
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLK 217
+ GM ++ ++F ++ G RP + +M+ +A+ KLG +D LK
Sbjct: 375 GFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALK 424
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 42.0 bits (97), Expect = 0.32, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIF---LDHLEGTPRIFFDKMISIYY 170
M+SKG TY L++ A+ G +++A+EL++++ + H T I + +
Sbjct: 843 MVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKL-- 900
Query: 171 NRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
G+ ++ + DM+ELG +P+ +S M AF + GM + +L K
Sbjct: 901 RNGIEVRI--LLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLK 946
Score = 38.1 bits (87), Expect = 4.8, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
ML +G + T+ LL L GR+ EA+ + + + LE + +D +++ Y +
Sbjct: 773 MLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPN-NLTYDILVTGYAKKS 831
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ ++ +M G P S + + + F K GM+++ ++L
Sbjct: 832 NKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKEL 874
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 44/88 (50%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
L++ GRLD+A+ + + + + ++ +I Y+ +G+ E+ DM
Sbjct: 353 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNK 412
Query: 189 GVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
G +PNV +++ + F KLG +D+ L
Sbjct: 413 GCKPNVYSYTILVDGFCKLGKIDEAYNL 440
>gi|115466680|ref|NP_001056939.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|55773690|dbj|BAD72273.1| putative PPR2 [Oryza sativa Japonica Group]
gi|113594979|dbj|BAF18853.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|215697063|dbj|BAG91057.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218197679|gb|EEC80106.1| hypothetical protein OsI_21852 [Oryza sativa Indica Group]
gi|222635046|gb|EEE65178.1| hypothetical protein OsJ_20289 [Oryza sativa Japonica Group]
Length = 511
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 10/127 (7%)
Query: 93 KALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD 152
K + L K +R ++ + M+ +G + +Y L++A + GR D A L L+
Sbjct: 165 KLITMLGKCKQPERAHELFQAMVDEGCAPNLESYTALVSAYSRSGRFDRAFSL-----LE 219
Query: 153 HLEGTPRIFFD-KMISIYYNRGMHEKMFE----IFADMEELGVRPNVSIVSMMGNAFQKL 207
++ TP D + SI +H FE + DM G+RPNV + + +A+ K
Sbjct: 220 QMKATPGCRPDVQTYSILIKSCLHAYDFERVKYLMEDMARAGIRPNVVTYNTLIDAYGKA 279
Query: 208 GMLDKYE 214
G + E
Sbjct: 280 GRFAEME 286
>gi|212275364|ref|NP_001130677.1| uncharacterized protein LOC100191780 [Zea mays]
gi|194707568|gb|ACF87868.1| unknown [Zea mays]
gi|195624402|gb|ACG34031.1| membrane-associated salt-inducible protein like [Zea mays]
gi|195653371|gb|ACG46153.1| membrane-associated salt-inducible protein like [Zea mays]
gi|413937895|gb|AFW72446.1| putative membrane-associated salt-inducible protein [Zea mays]
Length = 471
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161
+D + Q M +G T Y L++++ + +EAE LW ++ E P +
Sbjct: 195 RDDAKAKQALDLMREQGISPTNRIYTTLIDSMYKRKMTNEAESLWKEMVESECE--PDVA 252
Query: 162 FDKMISIYYN-RGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKL 216
+ ++YY G E++ E+ +ME GV+P+ + + + ++ K G L+ Y L
Sbjct: 253 TYNVKAMYYALHGKPEEVMEVMTEMEAAGVKPDTTTYNFLMTSYCKSGKLEDAKVLYHSL 312
Query: 217 KKK 219
+K
Sbjct: 313 AEK 315
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 7/126 (5%)
Query: 85 EFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGR-TMGTYFLLLNALAEDGRLDEAE 143
+F LI + DW++ +++ K+M + Y +++ + +G LD+A
Sbjct: 40 DFSLI-----FREFAQRSDWQKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKAS 94
Query: 144 ELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNA 203
EL+ + L+ +E F +I+ Y G HE + A M+ V PN+ + + NA
Sbjct: 95 ELFEDMPLNDVEWNV-YSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINA 153
Query: 204 FQKLGM 209
K G+
Sbjct: 154 CAKGGL 159
>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Brachypodium distachyon]
Length = 800
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 74/216 (34%), Gaps = 36/216 (16%)
Query: 27 LVVCAARGPRPRYPRVWKARKRIGTISKSAKLVTCIK--GLSNVKEEVYGALDSFIAWEL 84
L VC RG RV + K G T I G + + D A
Sbjct: 440 LAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGF 499
Query: 85 EFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEE 144
L T L L + DW + M ++G +Y LLL A+ G E
Sbjct: 500 TPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAAGIEA 559
Query: 145 LWTKIF--------------------LDHLEGTPRIF--------------FDKMISIYY 170
+ +++ LEG R F F+ M+S+Y
Sbjct: 560 IEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYA 619
Query: 171 NRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
GM+ K E+F +++ G+ P++ + M + + K
Sbjct: 620 KNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAK 655
>gi|307103654|gb|EFN51912.1| hypothetical protein CHLNCDRAFT_59068 [Chlorella variabilis]
Length = 1025
Score = 42.0 bits (97), Expect = 0.36, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLE-GTPR--IFFDK 164
+++ + ML+ G T TY L++A ++G+LD A +IF D + G R I +
Sbjct: 320 LRIYERMLAAGAQPTATTYTALISAYGKNGQLDRA----LQIFQDMVRRGCERNVITYSS 375
Query: 165 MISIYYNRGMHEKMFEIFADMEELGVRPNV----SIVSMMGNAFQKLGMLDKYEKLKKKY 220
+IS G E E+F +M G RPNV S+++ Q + +E+++ +
Sbjct: 376 LISACEKAGRWELALELFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQHRG 435
Query: 221 PPP 223
P
Sbjct: 436 CKP 438
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP-R 159
EK R IQ + M+S+G + TY +L AL +DG++D A EL + L +P
Sbjct: 169 EKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQ--LSSKGCSPVL 226
Query: 160 IFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNV 194
I ++ +I G ++ E+ +M G++P+V
Sbjct: 227 ITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDV 261
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
TY +++ L + GRLD+A + ++ D L +P I F +I + G EK E+F
Sbjct: 333 TYTTVIDGLCKIGRLDDAMSRFCQMIDDGL--SPNIITFTTLIHGFSMYGKWEKAEELFY 390
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYP 221
+M + G+ P+V+I + M + K G + + +KL P
Sbjct: 391 EMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMP 428
>gi|225456802|ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Vitis vinifera]
gi|147821419|emb|CAN76897.1| hypothetical protein VITISV_010606 [Vitis vinifera]
Length = 692
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 10 PFTKIFEPIKISRNARS-LVVCAARGPRPRYPRVWKARKRIGTISKSAKLVTCIKGLSNV 68
P T+ F ++I +A S L C RY WK + T + VTC ++ +
Sbjct: 234 PKTRQFRDVRIYNSAISGLSSCG------RYDDAWKVYDEMETNNIRPDHVTCSIMITVM 287
Query: 69 KEEVYGALDSFIAWE---------LEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQ 119
+++ + A D AWE +++ L + +K+ +E + + M KG
Sbjct: 288 RKDGHSAKD---AWEFFQRMNRKGVKWSLEVLGALIKSFCDEGLKNEALIIQSEMEKKGI 344
Query: 120 GRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMF 179
Y L++A ++ R++EAE L+ ++ + T + ++ Y+R M ++
Sbjct: 345 SSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATY--NILMDAYSRRMQPEII 402
Query: 180 E-IFADMEELGVRPNVSIVSMMGNAFQK 206
E + +M+++G+ PNV + + +A+ +
Sbjct: 403 ENLLLEMQDMGLEPNVKSYTCLISAYGR 430
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY LL+A G ++W + D +EGT R+ F+ ++ + +G + + ++ +
Sbjct: 491 TYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGT-RVTFNILLDGFAKQGHYMEARDVIFE 549
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
++G +P V +M+ NA+ + G + +L K+
Sbjct: 550 FGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKE 584
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 112 KWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYY 170
K ML KG + Y ++++L+++G+ EA ++ K + P +F ++ +IS +
Sbjct: 615 KCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGV--VPDVFLYNSLISGFC 672
Query: 171 NRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
G EK +++ +M G+ PN+ + + + N KLG + K +L
Sbjct: 673 KEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKAREL 718
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 103 DWKRII-QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEG----T 157
DW + +V + ++ G + T +++NAL +DG+ D+ K FL +EG
Sbjct: 97 DWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDD-----VKSFLSEMEGNGIYA 151
Query: 158 PRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+ ++ +I Y G+ E+ FEI M + G++P++ + + N K G
Sbjct: 152 DMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKG 202
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T + L + + I + + M++ GQ + TY +LL+ L ++ LD+A L
Sbjct: 390 VTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKA 449
Query: 149 IFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
I +L+ +I+ +I G E ++F+++ G++PNV ++M + K G
Sbjct: 450 IEGSNLDPDIQIY-TIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRG 508
Query: 209 MLDKYEKL 216
+LD+ KL
Sbjct: 509 LLDEATKL 516
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 65/129 (50%), Gaps = 9/129 (6%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L +L ++ + +V K M G + Y +L++A + G +++A+ L L +
Sbjct: 172 LNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNL-----LSEM 226
Query: 155 EGT---PRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML 210
E P +F ++ +IS+Y +GMH + + ME G++P++ + + + F K G +
Sbjct: 227 ESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRM 286
Query: 211 DKYEKLKKK 219
+ +L K+
Sbjct: 287 REAMRLFKE 295
>gi|388512253|gb|AFK44188.1| unknown [Medicago truncatula]
Length = 376
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
L++ +K L + + + V + M G + T+ LL+ L GR ++ E+LW
Sbjct: 159 LVSYNTYIKALLEKGSFDSAVSVLEEMEKDGVESDLITFNTLLDGLYSKGRFEDGEKLWE 218
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
K+ ++ R + +++ + + E + E + +ME+ GV+P++ + + F
Sbjct: 219 KLGEKNVVPNIRTYNARLLGLAVAKRAGEAV-EFYEEMEKKGVKPDLFSFNALIKGFANE 277
Query: 208 GMLDKYEKL-----KKKYPPPKWEYRYI 230
G LD+ +K K ++ P K Y I
Sbjct: 278 GNLDEAKKWFGEIEKSEHDPSKRTYAII 305
>gi|218194139|gb|EEC76566.1| hypothetical protein OsI_14394 [Oryza sativa Indica Group]
Length = 701
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRI---FFDKMISIYYNRGMHEKMFEIFADM 185
LL+ A+ G + EAE+L++++ L P+ + MI+IY + G ++ ++FA+M
Sbjct: 392 LLSMCADVGLVGEAEQLFSEMKDPDLGDVPKPDKWSYTAMINIYGSSGDADRALQLFAEM 451
Query: 186 EELGVRPNVSIVSMMGNAFQKLG 208
E G+ PN+ +++ K G
Sbjct: 452 VESGIEPNIMSYTIVIQCLGKAG 474
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Query: 86 FPLITV--KKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAE 143
FPL T+ ALK+L + W + ++ ML+ G TY L+ A + D+A
Sbjct: 171 FPLDTIVFNVALKSLRAARQWPQAERLALDMLASGVPLDNITYSTLITAARRCRQFDKAV 230
Query: 144 ELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNA 203
E + +++ + + ++ +Y GM E++ +F G +P+ +++
Sbjct: 231 EWFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKM 290
Query: 204 FQKLGMLDKYE 214
F + G D +
Sbjct: 291 FGEAGDYDGIQ 301
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 5/158 (3%)
Query: 62 IKGLSNVK--EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQ 119
IKGL V EE G L +T + E + ++ I+V M KG
Sbjct: 375 IKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434
Query: 120 GRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKM 178
+ T+ L++ + G+++ A L+T++ + L P + + +I ++ G ++
Sbjct: 435 EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL--LPDVVAYTALIDGHFKDGNTKEA 492
Query: 179 FEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
F + +M+E G+ PNV +S + + K G + KL
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530
>gi|242091784|ref|XP_002436382.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
gi|241914605|gb|EER87749.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
Length = 507
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPR---IFFDKMISIYYNRGMHEKMFEIFADM 185
LL+A A GR+D+AE L+ G P I + M+S Y G HE+ F +M
Sbjct: 157 LLSAYARCGRVDDAESLFA--------GMPDRNVISWTAMVSGYAQNGRHEEAVRTFLEM 208
Query: 186 -EELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
E GVRPN VS + A +G L K+++
Sbjct: 209 WEGCGVRPNEVTVSSVLPACAAVGALALGRKVER 242
>gi|384247929|gb|EIE21414.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 448
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFF 162
+W+ +QV + +G + TY +L+A G+ + A ++ ++ D + T +
Sbjct: 158 NWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQPEHALRVYERMLADGAQPTATT-Y 216
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+IS Y G E+ IF DM G NV S + +A +K G
Sbjct: 217 TALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLISACEKAG 262
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKI-FLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFA 183
TY +++ A+ GRLD+A L+ ++ FL R+ ++ ++SIY G E+ ++
Sbjct: 255 TYSTMIDGYAKAGRLDDARNLFNEMKFLGI--SLDRVSYNTLLSIYAKLGRFEEAMDVCR 312
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLD----KYEKLKKKYPPP 223
+ME G+R +V + + + K D +E++K ++ P
Sbjct: 313 EMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSP 356
>gi|297737368|emb|CBI26569.3| unnamed protein product [Vitis vinifera]
Length = 392
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 64/125 (51%), Gaps = 9/125 (7%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFF 162
D + +++ M + G ++G+Y ++ AL GR EAE ++ ++ L+ R+
Sbjct: 81 DVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREMVHLGLKLDLRV-- 138
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG----MLDKYEKLKK 218
I +Y + GM +K EI ++ E+GV + I + + + F K G L+ +EK+++
Sbjct: 139 ---IGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVFEKMQE 195
Query: 219 KYPPP 223
+ P
Sbjct: 196 EGVKP 200
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 70 EEVYGALDSFIAWELEFP-LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFL 128
EE Y LD L FP L+TV + L + + ++ + +G TY
Sbjct: 139 EEAYRILDEMEHASL-FPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCS 197
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
L++ L + G++DEA L+ K+ LD + + +I ++ G E +IF ++
Sbjct: 198 LIDGLGKKGQVDEAYRLFEKM-LDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRR 256
Query: 189 GVRPNVSIVSMMGNAFQKLGMLDK 212
G +P++++++ + K G ++K
Sbjct: 257 GCKPDLTLLNTYMDCVFKAGEVEK 280
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 10/128 (7%)
Query: 104 WKRIIQVTKW---MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP-R 159
W +++ K M++KG + +Y +L+N + R+DEA++L+ ++ H TP
Sbjct: 233 WTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMI--HQGSTPNN 290
Query: 160 IFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEK 215
+ ++ +I G + ++F +M G PN+ +++ + F K G L K +
Sbjct: 291 VSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRA 350
Query: 216 LKKKYPPP 223
++ Y P
Sbjct: 351 MQSTYLKP 358
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 112 KWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR-IFFDKMISIYY 170
K M + G + TY +LL+ + G L +A L+ + +L+ P + ++ +++
Sbjct: 314 KNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLK--PNLVMYNILVNAMC 371
Query: 171 NRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK-YEKLKK----KYPPPKW 225
G + E+F+++ +G++PNV I + + N K G+LD+ E + PP ++
Sbjct: 372 KSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEF 431
Query: 226 EYRYI 230
Y I
Sbjct: 432 SYNVI 436
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L EK R I+ M+S+G + TY LL AL +DG++D A E+ + L
Sbjct: 229 LHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ--LSSK 286
Query: 155 EGTP-RIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
+P I ++ +I G E+ ++ +M G++P++ S + + + G +D
Sbjct: 287 GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVD 344
>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 660
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
++T + L N K + + + + M+ G + L+ L ++ +++EA EL +
Sbjct: 295 VVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELAS 354
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
++ ++E + I+ + +IS ++ G +K + I + M G P V +++ N + +
Sbjct: 355 RMLSLNIELSVSIY-NALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTI 413
Query: 208 GMLDKYEKLKKKYP-----PPKWEY-RYIKG 232
GM++K E L K P ++ Y + +KG
Sbjct: 414 GMMEKAENLITKMETSGVNPDRYSYNQLLKG 444
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L + E+ Q+ + + SKG + TY +L+ G EA +LW ++
Sbjct: 235 LSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMI--EA 292
Query: 155 EGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
P I + +I Y + GM+++ F DM + G+ P+ I + + +A+ K G
Sbjct: 293 GCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAG 347
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 70 EEVYGALDSFIAWELEFP-LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFL 128
EE Y LD L FP L+TV + L + + ++ + +G TY
Sbjct: 271 EEAYRILDEMEHASL-FPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCS 329
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
L++ L + G++DEA L+ K+ LD + + +I ++ G E ++F ++
Sbjct: 330 LIDGLGKKGQVDEAYRLFEKM-LDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRR 388
Query: 189 GVRPNVSIVSMMGNAFQKLGMLDK 212
G +P++++++ + K G ++K
Sbjct: 389 GCKPDLTLLNTYMDCVFKAGEVEK 412
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L + E+ Q+ + + SKG + TY +L+ G EA +LW ++
Sbjct: 235 LSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMI--EA 292
Query: 155 EGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
P I + +I Y + GM+++ F DM + G+ P+ I + + +A+ K G
Sbjct: 293 GCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAG 347
>gi|297802950|ref|XP_002869359.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315195|gb|EFH45618.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 906
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGR-TMGTYFLLLNALAEDGRLDEAEELWTKIFLDH 153
LK LE+ D I+ WM KG+ G Y L+L L + AE+L + L
Sbjct: 148 LKRLESCSD-TNAIKFFDWMRCKGKLEGNFGAYSLILRVLGRREEWNRAEDLIEE--LCG 204
Query: 154 LEGTPRIF--FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
+G + F F+ +I +G + + F M ELGVRPNV+ + M+ +QK
Sbjct: 205 FQGFQQSFQVFNTVIYACTKKGNVKLASKWFQMMLELGVRPNVATIGMLMGLYQK 259
>gi|225454795|ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Vitis vinifera]
Length = 1071
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 23/182 (12%)
Query: 64 GLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWM-LSKGQGRT 122
G N++E + SF+A +L F + V L+ ++ W++ WM L +
Sbjct: 142 GSYNMRE----VMGSFVA-KLSFREMCV-----VLKEQRGWRQARDFFGWMKLQLSYQPS 191
Query: 123 MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT---PRIFFDKMISIYYNRGMHEKMF 179
+ Y +LL + G++ AE+ FL+ LE + M+ Y G H+ M
Sbjct: 192 VIVYTILLRVYGQVGKIKLAEQ----AFLEMLEAGCEPDEVACGTMLCTYARWGRHKAML 247
Query: 180 EIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKY-----EKLKKKYPPPKWEYRYIKGKR 234
++ ++E G+ P++++ + M ++ QK + K E + K P + Y +
Sbjct: 248 SFYSAVQERGIIPSIAVFNFMLSSLQKKSLHGKVIDLWREMVDKGVVPNSFTYTVVISSL 307
Query: 235 VR 236
V+
Sbjct: 308 VK 309
>gi|302822123|ref|XP_002992721.1| hypothetical protein SELMODRAFT_135826 [Selaginella moellendorffii]
gi|300139462|gb|EFJ06202.1| hypothetical protein SELMODRAFT_135826 [Selaginella moellendorffii]
Length = 449
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 122 TMGTYFLLLNALAEDGRLDEAEELWTKIF-LDHLEGTPRIF-FDKMISIYYNRGMHEKMF 179
++ TY +L A A+ G D+AE L+ ++ D L+ P + F+ ++ Y +G++ M
Sbjct: 168 SLATYNMLTRACAQAGLTDKAEALFLELLRRDDLK--PDAYTFNGIMDAYAKKGLYRDME 225
Query: 180 EIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
+M E GVRP++ +++ +A+ + G K E+ K
Sbjct: 226 YKLKEMSEHGVRPDLVTFNVLIDAYGRAGDFVKMERTYK 264
>gi|297735213|emb|CBI17575.3| unnamed protein product [Vitis vinifera]
Length = 656
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 63/135 (46%), Gaps = 20/135 (14%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T + N+ D +R ++V K M +KG T+ +Y + L ++ R+ EA +++ +
Sbjct: 228 VTYTSLMHWFSNDGDIERAVRVWKEMKAKGCCLTVVSYTAYMKILFDNKRVKEAADVYKE 287
Query: 149 --------------IFLDHLEGTPRIFFD-KMISIYYNRGMHEKMFEIFADMEELGVRPN 193
+ ++HL G+ + I+ Y + EIF+ M+E GV+P+
Sbjct: 288 MLQSGCAPNCYTYTVLMEHLTGSGKHLLQFSCIACKYKAAL-----EIFSRMQEAGVQPD 342
Query: 194 VSIVSMMGNAFQKLG 208
+ +++ F K G
Sbjct: 343 KATCNILIEKFCKTG 357
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKI-FLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFA 183
TY +++ A+ GRLD+A ++ ++ FL G R+ ++ ++S+Y G E+ ++
Sbjct: 368 TYSTMIDGYAKVGRLDDALNMFNEMKFLG--VGLDRVSYNTLLSVYAKLGRFEQALDVCK 425
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKKKYPPP 223
+ME G+R +V + + + K D+ +E++K+ P
Sbjct: 426 EMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSP 469
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF- 161
++K+++++ MLS G T+ LL + G + A L++ + ++ IF
Sbjct: 276 EFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGID--QDIFT 333
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
++ ++ G + FEI ++M + PNV S M + + K+G LD
Sbjct: 334 YNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLD 383
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 75/162 (46%), Gaps = 4/162 (2%)
Query: 52 ISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVT 111
++ +A + C KG K+ V D ++ ++ IT L W+ ++
Sbjct: 261 VTYNAVIDACGKGGVEFKK-VVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLF 319
Query: 112 KWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYY 170
M+ KG + + TY LL+A+ + G++D A E+ +++ ++ P + + MI Y
Sbjct: 320 SAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNI--LPNVVTYSTMIDGYA 377
Query: 171 NRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
G + +F +M+ LGV + + + + + KLG ++
Sbjct: 378 KVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQ 419
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 64/132 (48%), Gaps = 3/132 (2%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T ++ N + ++ +++ ML G Y+ L++ L++ G+LD A + +K
Sbjct: 487 VTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSK 546
Query: 149 IFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+ +P I F+ +I+ + + ++ +E+ +ME G++P+ + + + F K
Sbjct: 547 --MKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKT 604
Query: 208 GMLDKYEKLKKK 219
G +L KK
Sbjct: 605 GDFSTAHRLMKK 616
>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
Length = 663
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 10/140 (7%)
Query: 100 NEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR 159
N KD + ++ M+S G TY L++A E G L EA + + + D L +
Sbjct: 527 NLKDAEELMM---QMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSA- 582
Query: 160 IFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK-----YE 214
+ + +I Y RG + F M E GV PN +++ +A ++G YE
Sbjct: 583 VTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYE 642
Query: 215 KLKKKYPPPKWEYR-YIKGK 233
L++ P K+ Y I GK
Sbjct: 643 MLERGLVPNKYTYTLLIDGK 662
>gi|356572391|ref|XP_003554352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic-like [Glycine max]
Length = 811
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 60 TCIKGLSNVKEEVYGALDSF-IAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKG 118
C+ G ++ +++Y L +L+ + T +K + K W+ +++ + MLS G
Sbjct: 305 CCVAGRVDLAQDIYRELKHLESVGQLKLDVFTYSTIIKVFADVKLWQMALKIKQDMLSAG 364
Query: 119 QGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161
+ + L+NA A G +++A +L+ ++ L E + F
Sbjct: 365 VSLNIVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCF 407
>gi|307108031|gb|EFN56272.1| hypothetical protein CHLNCDRAFT_51958 [Chlorella variabilis]
Length = 1271
Score = 41.6 bits (96), Expect = 0.44, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T A+ DW+R +++ ML++G + Y +L A +LD A +L +
Sbjct: 902 VTYSAAIIACARLADWQRAVELKDQMLARGLPASPIVYNSVLAACEASRQLDAALDLLDE 961
Query: 149 IFLDHLEGTPR---IFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQ 205
+ + G PR + M Y+ G +F +M+E G+ PN+ +V+ + +
Sbjct: 962 M---RVAGVPRDQYTYSTLMSCCYHGEGHLGPAMRLFQEMQEEGLTPNIVVVNALLSVCA 1018
Query: 206 KLGMLDKYEKLKK 218
+G D ++ +
Sbjct: 1019 TVGDADAASRVYR 1031
>gi|297737325|emb|CBI26526.3| unnamed protein product [Vitis vinifera]
Length = 1005
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 18/147 (12%)
Query: 64 GLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWM-LSKGQGRT 122
G N++E + SF+A +L F + V L+ ++ W++ WM L +
Sbjct: 142 GSYNMRE----VMGSFVA-KLSFREMCV-----VLKEQRGWRQARDFFGWMKLQLSYQPS 191
Query: 123 MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT---PRIFFDKMISIYYNRGMHEKMF 179
+ Y +LL + G++ AE+ FL+ LE + M+ Y G H+ M
Sbjct: 192 VIVYTILLRVYGQVGKIKLAEQ----AFLEMLEAGCEPDEVACGTMLCTYARWGRHKAML 247
Query: 180 EIFADMEELGVRPNVSIVSMMGNAFQK 206
++ ++E G+ P++++ + M ++ QK
Sbjct: 248 SFYSAVQERGIIPSIAVFNFMLSSLQK 274
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T + L K I + ++S+G T TY LL+ L +DG +++AE L+ +
Sbjct: 837 VTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDE 896
Query: 149 IFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNV 194
+ E I ++ +++ Y G EK+ E+F M E G+ P++
Sbjct: 897 MLECGCEPNCAI-YNILLNGYRIAGDTEKVCELFESMVEQGMNPDI 941
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 7/139 (5%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFF 162
D +++ ++ + M+ +G + +Y ++++ L DGRL++ + ++ LE I +
Sbjct: 921 DTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLE-PDLITY 979
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPNV----SIVSMMGNAFQKLGMLDKYEK-LK 217
+ +I G E+ ++ DME+ G+ PN+ S++ +G A + YE+ L
Sbjct: 980 NLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLA 1039
Query: 218 KKYPPPKWEYR-YIKGKRV 235
K + P + Y I+G V
Sbjct: 1040 KGWKPNVFTYNALIRGYSV 1058
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 68/152 (44%), Gaps = 4/152 (2%)
Query: 65 LSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMG 124
L ++ EE++ + EF T L + + ++++ + M +KG T
Sbjct: 781 LIDIAEELFSEMKRLGCDPDEF---TYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYV 837
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY +++ L + LDEA L+ ++ + TP + ++ G E +F +
Sbjct: 838 TYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTP-CTYGPLLDGLLKDGNIEDAEALFDE 896
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
M E G PN +I +++ N ++ G +K +L
Sbjct: 897 MLECGCEPNCAIYNILLNGYRIAGDTEKVCEL 928
>gi|297844618|ref|XP_002890190.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336032|gb|EFH66449.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 741
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMIS 167
QV M+ G ++ + +L++ G +A +L+ K+ + P + + +I
Sbjct: 366 QVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMI--QISCFPNLVTYTSLIK 423
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKKKYPPP 223
+ + GM E+ F + + ++ G+ P++ + ++M + F +LG ++ + LKK+ P
Sbjct: 424 GFVDLGMVEEAFTVLSKVQSEGLAPDIVLCNLMIHTFTRLGRFEEARNVFTSLKKRKLVP 483
Query: 224 KWEYRYI 230
+Y ++
Sbjct: 484 D-QYTFV 489
>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 754
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 22/131 (16%)
Query: 107 IIQVTKWMLSKGQG-----RTMGTYFL--------LLNALAEDGRLDEAEELWTKIFLDH 153
++ V ML+ QG +T+ T FL L++ + G ++ A +K FL+
Sbjct: 384 VLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERA----SKAFLE- 438
Query: 154 LEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN----VSIVSMMGNAFQKLGM 209
+ I + MI+ + GM ++ IF DM GVRPN V ++S +A
Sbjct: 439 MSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQA 498
Query: 210 LDKYEKLKKKY 220
L+ +E ++KKY
Sbjct: 499 LNYFEIMQKKY 509
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T + L K I + ++S+G T TY LL+ L +DG +++AE L+ +
Sbjct: 837 VTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDE 896
Query: 149 IFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNV 194
+ E I ++ +++ Y G EK+ E+F M E G+ P++
Sbjct: 897 MLECGCEPNCAI-YNILLNGYRIAGDTEKVCELFESMVEQGMNPDI 941
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 7/139 (5%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFF 162
D +++ ++ + M+ +G + +Y ++++ L DGRL++ + ++ LE I +
Sbjct: 921 DTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLE-PDLITY 979
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPNV----SIVSMMGNAFQKLGMLDKYEK-LK 217
+ +I G E+ ++ DME+ G+ PN+ S++ +G A + YE+ L
Sbjct: 980 NLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLA 1039
Query: 218 KKYPPPKWEYR-YIKGKRV 235
K + P + Y I+G V
Sbjct: 1040 KGWKPNVFTYNALIRGYSV 1058
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 68/152 (44%), Gaps = 4/152 (2%)
Query: 65 LSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMG 124
L ++ EE++ + EF T L + + ++++ + M +KG T
Sbjct: 781 LIDIAEELFSEMKRLGCDPDEF---TYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYV 837
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY +++ L + LDEA L+ ++ + TP + ++ G E +F +
Sbjct: 838 TYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTP-CTYGPLLDGLLKDGNIEDAEALFDE 896
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
M E G PN +I +++ N ++ G +K +L
Sbjct: 897 MLECGCEPNCAIYNILLNGYRIAGDTEKVCEL 928
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP--RIFFDKMISIYYNRGMHEKMFEIF 182
Y +L L R +EAE+L ++F E P + F+ ++ + G+ +++ E+
Sbjct: 295 CYNTVLKGLCSAERWEEAEDLLAEMFQ---EDCPLDDVTFNILVDFFCQNGLVDRVIELL 351
Query: 183 ADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
M E G P+V + + N F K G++D+ L K
Sbjct: 352 EQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKN 388
>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L +L ++ + ++ K M+ G + Y +LL+A + G +++AE++ +++ L +
Sbjct: 178 LNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMELKCV 237
Query: 155 EGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
P +F ++ +IS+Y +GMH + + ME G+ P++ + + F + G
Sbjct: 238 --FPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREG 290
>gi|388516039|gb|AFK46081.1| unknown [Lotus japonicus]
Length = 327
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 43/190 (22%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELW- 146
+I+ L+ L N++ W+ ++ MLSKG + TY +L+++L DG+++EA L
Sbjct: 95 VISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRDGKVEEAVSLLK 154
Query: 147 ----TKIFLDHLEGTPRI--------------FFDKMIS-------IYYN--------RG 173
+ D P I F + MIS + YN G
Sbjct: 155 VMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNYNTILSTLCKNG 214
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMM-------GNAFQKLGMLDKYEKLKKKYPPPKWE 226
++ +IF + E+G PNVS + + G+ + LGM+ E L K P +
Sbjct: 215 KADEALKIFEKLGEVGCPPNVSSYNTLFSALWSSGHKIRALGMI--LEMLSKDIDPDEIT 272
Query: 227 YRYIKGKRVR 236
Y + R
Sbjct: 273 YNSLISCLCR 282
>gi|357510555|ref|XP_003625566.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500581|gb|AES81784.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 829
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Query: 60 TCIKGLSNVKEEVYGALDSF-IAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKG 118
C+ G +V +++Y L +L+ + T +K + K W+ +++ + MLS G
Sbjct: 293 CCVAGRVDVAQDMYRDLKHLESVGQLKLDVFTYSTIIKVFADAKLWQMALKIKRDMLSAG 352
Query: 119 QGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKM 178
+ L+NA A G +++A +L+ ++ L E + F+ ++ +++
Sbjct: 353 VSLNTIAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQC-FNIILHACVEGCQYDRA 411
Query: 179 FEIF 182
F +F
Sbjct: 412 FRLF 415
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP--RIFFDKMISIYYNRGMHEKMFEIF 182
Y +L L R +EAE+L ++F E P + F+ ++ + G+ +++ E+
Sbjct: 320 CYNTVLKGLCSAERWEEAEDLLAEMFQ---EDCPLDDVTFNILVDFFCQNGLVDRVIELL 376
Query: 183 ADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
M E G P+V + + N F K G++D+ L K
Sbjct: 377 EQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKN 413
>gi|413934890|gb|AFW69441.1| hypothetical protein ZEAMMB73_914225 [Zea mays]
Length = 504
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 15/113 (13%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT-------KIFLDHLEGTPRIFFDKMI 166
M G R TY LLL A A GRL+++ W I LD + ++
Sbjct: 149 MADDGVARNRRTYTLLLGAYARAGRLEDS--WWVLGEMRRWGIRLDTAG------YSMLV 200
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+Y + GM +K ++ +M+E+GV +V I S + + F K G L ++ K
Sbjct: 201 RLYRDNGMWKKATDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRMFDK 253
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
+ L + W I ++ M ++G + Y +L++ + G +A++ + ++
Sbjct: 305 ISRLGEQGKWDEIKKLFDGMNNRGFKESGAVYAILVDIYGQYGHFRDAQDCIAALRAENT 364
Query: 155 EGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+ PR+F + + Y +G+ E+ + MEE G PN+ +++ + NAF G
Sbjct: 365 QLLPRVFC-VIANAYAQQGLCEQTVNVLQLMEEEGFEPNLVMLNSLINAFGTAG 417
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
M S+G T TY L++ + GR+DEA+E++ ++ + L P +F + +I +
Sbjct: 667 MKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGL--LPNVFCYTALIGGHCKL 724
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
G + + I +M G+RPN ++M + + KLG
Sbjct: 725 GQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLG 760
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 97 TLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEG 156
L N+ D I+V M+ KG + +Y +L+N + R++EA+ L +++ +L
Sbjct: 352 CLHNQMD--EAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNL-- 407
Query: 157 TP-RIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEK 215
TP + + ++ G + +F +M G+ P++ S++ + F K G LD+ K
Sbjct: 408 TPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALK 467
Query: 216 LKKK 219
L K+
Sbjct: 468 LLKE 471
>gi|218190347|gb|EEC72774.1| hypothetical protein OsI_06434 [Oryza sativa Indica Group]
Length = 579
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L+ L N + I + M KG +G Y ++ +AL + ++ L+ K+ + +
Sbjct: 342 LEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGI 401
Query: 155 EGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKY 213
P +F ++ MIS Y G+ +K E+F ME +P+V + + N K G LD+
Sbjct: 402 --IPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEA 459
Query: 214 EKL-----KKKYPPPKWEY 227
L +K Y P + Y
Sbjct: 460 HMLFKEMQEKGYDPDVFTY 478
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 63/142 (44%), Gaps = 3/142 (2%)
Query: 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL 129
E +DS ++ L+ ++T LK L W + +V K M G + ++ +L
Sbjct: 147 EAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTIL 206
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEEL 188
+ G ++EA +++ + + H P + F +I ++ RG + +M
Sbjct: 207 IGGFCRVGEIEEALKIYKE--MRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCF 264
Query: 189 GVRPNVSIVSMMGNAFQKLGML 210
G+ P+ I +M+ F + G++
Sbjct: 265 GLVPDGVIYTMVIGGFCRAGLM 286
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT-----KIFLDHLE 155
E + +Q+ ML++ + TY L++ + G LD+A +LW +IF +H
Sbjct: 353 EGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNH-- 410
Query: 156 GTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEK 215
+ + +I + +G E F +M G+ PN+ + + + + G + K +K
Sbjct: 411 ----VTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQK 466
Query: 216 LKKK 219
+K
Sbjct: 467 FLQK 470
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR-IFFDKMISIYYNRGMHEKMFEIFA 183
+Y +L++ LA+ G+L++A L+ K+ H TP + + +I + E+FA
Sbjct: 12 SYGILIDGLAKAGKLNDARNLFQKLL--HSGVTPSTVAYTSLIHGLCMANSFDDARELFA 69
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
DM G P+ ++M +A K GML++ L KK
Sbjct: 70 DMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKK 105
>gi|302823876|ref|XP_002993586.1| hypothetical protein SELMODRAFT_137265 [Selaginella moellendorffii]
gi|300138598|gb|EFJ05361.1| hypothetical protein SELMODRAFT_137265 [Selaginella moellendorffii]
Length = 451
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 122 TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFE 180
++ TY +L A A+ G D+AE L+ ++ L + P + F+ ++ Y +G++ M
Sbjct: 170 SLATYNMLTRACAQAGLTDKAEALFLEL-LRREDLKPDAYTFNGIMDAYAKKGLYRDMEY 228
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
+M E GVRP++ +++ +A+ + G K E+ K
Sbjct: 229 KLKEMSEHGVRPDLVTFNVLIDAYGRAGDFVKMERTYK 266
>gi|357462685|ref|XP_003601624.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490672|gb|AES71875.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR--IFFDKMISIYYNRGMHEKMFEIF 182
+Y +L E G EA L++ L ++G P+ + ++ MISIY H+K +
Sbjct: 373 SYNTVLRVYGEAGLFGEAVHLFS---LMQMKGVPQNVVTYNTMISIYGKSLEHDKATNLI 429
Query: 183 ADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+M+ G++PN S + + ++K G LD+ L K
Sbjct: 430 QEMQSRGIQPNAITYSTIISIWEKAGKLDRAAMLFHK 466
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
+ LA G++DEA ++ + F D E F +I I+ + + E+F M E+G
Sbjct: 514 ITILARAGKVDEAMWVFRQAF-DAGEVKDISVFGCIIDIFSRERKYAHVVEVFEKMREVG 572
Query: 190 VRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
P+ ++++++ NAF KL ++ + L K+
Sbjct: 573 HFPDSNVIALVLNAFGKLRKFERADALYKQ 602
>gi|222622462|gb|EEE56594.1| hypothetical protein OsJ_05954 [Oryza sativa Japonica Group]
Length = 579
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L+ L N + I + M KG +G Y ++ +AL + ++ L+ K+ + +
Sbjct: 342 LEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGI 401
Query: 155 EGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKY 213
P +F ++ MIS Y G+ +K E+F ME +P+V + + N K G LD+
Sbjct: 402 --IPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEA 459
Query: 214 EKL-----KKKYPPPKWEY 227
L +K Y P + Y
Sbjct: 460 HMLFKEMQEKGYDPDVFTY 478
>gi|225446761|ref|XP_002278350.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040
[Vitis vinifera]
gi|302143502|emb|CBI22063.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMI 166
+ V + ML G T Y +LL+A A G +D+A ++ + D TP I + M+
Sbjct: 335 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKSMRRDRC--TPDICSYTTML 392
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG----MLDKYEKLK 217
S Y N E + F +++ G PNV + + K+ M++KYE+++
Sbjct: 393 SAYVNASDMEGAEKFFRRLKQDGFEPNVVTYGTLIKGYAKISNLEKMMEKYEEMQ 447
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP--- 158
K + + V + MLS G + TY L+L E + EAEE + + D E +P
Sbjct: 189 KQYNKAESVFRRMLSSGPEPSALTYQLILKIFVEGNKFKEAEETFETLLDD--EKSPLKP 246
Query: 159 -RIFFDKMISIYYNRGMHEKMFEIFADMEELGV-RPNVSIVSMM 200
+ F MI +Y G +EK +IF M E GV + V+ S+M
Sbjct: 247 DQKMFHMMIYMYRKAGNYEKARKIFGLMRERGVPQSTVTYNSLM 290
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 41.6 bits (96), Expect = 0.49, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
+ D +QV M +G TY L+N L + GR++EA +L ++ L + T
Sbjct: 433 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 492
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML 210
+I++ + G +E + +F DM+ G PNV + + + G+L
Sbjct: 493 CTGPIIAL-CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLL 541
Score = 39.7 bits (91), Expect = 2.0, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
MLS+G + Y ++NAL +DG + +AE + K+F E +P F + MI + +
Sbjct: 376 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVF--ESEMSPDTFTYTSMILGHCRK 433
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ ++F M + G PN S + N G +++
Sbjct: 434 HDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNE 473
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 41.6 bits (96), Expect = 0.49, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
+ D +QV M +G TY L+N L + GR++EA +L ++ L + T
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML 210
+I++ + G +E + +F DM+ G PNV + + + G+L
Sbjct: 323 CTGPIIAL-CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLL 371
Score = 39.7 bits (91), Expect = 2.0, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
MLS+G + Y ++NAL +DG + +AE + K+F E +P F + MI + +
Sbjct: 206 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVF--ESEMSPDTFTYTSMILGHCRK 263
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ ++F M + G PN S + N G +++
Sbjct: 264 HDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNE 303
>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP-RIF 161
D + ++ M+ +G + TY L+N L D +L E L+ + + L TP RI
Sbjct: 543 DLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGL--TPDRIL 600
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
+ +I+ Y R + EIF +ME G+ + + + + F K+ +D
Sbjct: 601 YTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMD 650
>gi|41393251|gb|AAS01974.1| putative chloroplastic RNA-binding protein, with alternative
splicing isoforms [Oryza sativa Japonica Group]
gi|108712189|gb|ABF99984.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 884
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRI---FFDKMISIYYNRGMHEKMFEIFADM 185
LL+ A+ G + EAE+L++++ L P+ + MI+IY + G ++ ++FA+M
Sbjct: 389 LLSMCADVGLVGEAEQLFSEMKDPDLGDVPKPDKWSYTAMINIYGSSGDADRALQLFAEM 448
Query: 186 EELGVRPNVSIVSMMGNAFQKLG 208
E G+ PN+ +++ K G
Sbjct: 449 VESGIEPNIMSYTIVIQCLGKAG 471
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Query: 86 FPLITV--KKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAE 143
FPL T+ ALK+L + W + ++ ML+ G TY L+ A + D+A
Sbjct: 168 FPLDTIVFNVALKSLRAARQWPQAERLALDMLASGVPLDNITYSTLITAARRCRQFDKAV 227
Query: 144 ELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNA 203
E + +++ + + ++ +Y GM E++ +F G +P+ +++
Sbjct: 228 EWFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKM 287
Query: 204 FQKLGMLDKYE 214
F + G D +
Sbjct: 288 FGEAGDYDGIQ 298
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
T+ LL+ L + G L++A EL+ K+ E P F F ++ Y G+ K E+
Sbjct: 149 TFNLLIGLLCDSGHLEDARELFDKMPARGCE--PNEFTFGILVRGYCRAGLASKGLELLG 206
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
M +G+ PN + + + ++F K G EKL K
Sbjct: 207 QMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDK 242
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP-RIFFDKMI 166
+ + K ML G +GTY L++ L +DG L A EL+T++ L P I + ++
Sbjct: 709 LDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGL--VPDEIIYTVIV 766
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ +G K+ ++F +M++ V PNV I + + + G LD+ +L
Sbjct: 767 NGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRL 816
>gi|413934891|gb|AFW69442.1| hypothetical protein ZEAMMB73_914225 [Zea mays]
Length = 507
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 15/113 (13%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT-------KIFLDHLEGTPRIFFDKMI 166
M G R TY LLL A A GRL+++ W I LD + ++
Sbjct: 149 MADDGVARNRRTYTLLLGAYARAGRLEDS--WWVLGEMRRWGIRLDTAG------YSMLV 200
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+Y + GM +K ++ +M+E+GV +V I S + + F K G L ++ K
Sbjct: 201 RLYRDNGMWKKATDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRMFDK 253
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMI 166
+ +K ML KG + TY L++ L+ G+L EAE+L +I L+ P +F ++ +I
Sbjct: 549 FRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLK--PDVFTYNSLI 606
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGM 209
S Y G ++ ++ +M+ G++P + ++ + K G+
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGI 649
>gi|413917311|gb|AFW57243.1| hypothetical protein ZEAMMB73_018964 [Zea mays]
Length = 514
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF----FDKMISIYYNRGMHEKMFE 180
++ L + A + G +D+AE++W H++ T ++ F+ M+S+Y G+ +K
Sbjct: 322 SFTLAIEAFGKVGSIDQAEKIWI-----HIKSTKKLSLTEQFNSMLSVYCRHGVVDKASS 376
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGML 210
+F +M G +PN + K G++
Sbjct: 377 VFKEMRANGCQPNAITYRHLALGCLKSGLV 406
>gi|27476073|gb|AAO17004.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 572
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 84 LEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAE 143
L+ + T +K + K WK + + M S G + T+ L+NA A G +D A
Sbjct: 350 LKLDVFTYSTMMKVFADAKMWKLASDIKQDMQSAGVRLNLVTWSSLINAYANSGLVDRAI 409
Query: 144 ELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVS 195
E+ ++ D + T F+ +++ +++ F +F D +E GV+ ++S
Sbjct: 410 EILEEMTRDGCQPTAPC-FNIILTGCVKSCQYDRAFRLFYDWKEYGVKISLS 460
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLE-GTPRI 160
+ W RI+++ M SKG T +++A +G LDEA + ++ L+ + GT +
Sbjct: 266 RSWGRILELLDEMRSKGLEFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPGT--V 323
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
++ M+ ++ G++ + I +ME+ P+ + + + + G LD+
Sbjct: 324 MYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDE 375
>gi|297798228|ref|XP_002866998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312834|gb|EFH43257.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 411
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 105 KRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDK 164
++ I++ + M KG T + +L++L + G L+ AE LW ++ E + +
Sbjct: 191 QKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVAESLWNEMVKKGCELDNAAYNVR 250
Query: 165 MISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
++S + E++ E+ +M +G++P+ + + A+ + GMLD+ +K+
Sbjct: 251 IMSA--QKESPERVKELIEEMSTMGLKPDTISYNYLMTAYCEKGMLDEAKKV 300
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR-IFFDKMISIYYNRGMHEKMFEIFA 183
+Y +L++ LA+ G+L++A L+ K+ H TP + + +I + E+FA
Sbjct: 325 SYGILIDGLAKAGKLNDARNLFQKLL--HSGVTPSTVAYTSLIHGLCMANSFDDARELFA 382
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
DM G P+ ++M +A K GML++ L KK
Sbjct: 383 DMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKK 418
>gi|115456691|ref|NP_001051946.1| Os03g0856100 [Oryza sativa Japonica Group]
gi|41393252|gb|AAS01975.1| putative chloroplastic RNA-binding protein, with alternative
splicing isoforms [Oryza sativa Japonica Group]
gi|113550417|dbj|BAF13860.1| Os03g0856100 [Oryza sativa Japonica Group]
gi|222626198|gb|EEE60330.1| hypothetical protein OsJ_13428 [Oryza sativa Japonica Group]
Length = 640
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPR---IFFDKMISIYYNRGMHEKMFEIFADM 185
LL+ A+ G + EAE+L++++ L P+ + MI+IY + G ++ ++FA+M
Sbjct: 329 LLSMCADVGLVGEAEQLFSEMKDPDLGDVPKPDKWSYTAMINIYGSSGDADRALQLFAEM 388
Query: 186 EELGVRPNVSIVSMMGNAFQKLG 208
E G+ PN+ +++ K G
Sbjct: 389 VESGIEPNIMSYTIVIQCLGKAG 411
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Query: 86 FPLITV--KKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAE 143
FPL T+ ALK+L + W + ++ ML+ G TY L+ A + D+A
Sbjct: 108 FPLDTIVFNVALKSLRAARQWPQAERLALDMLASGVPLDNITYSTLITAARRCRQFDKAV 167
Query: 144 ELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNA 203
E + +++ + + ++ +Y GM E++ +F G +P+ +++
Sbjct: 168 EWFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVLALFDRARGSGWKPDHVAFAVLAKM 227
Query: 204 FQKLGMLDKYE 214
F + G D +
Sbjct: 228 FGEAGDYDGIQ 238
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 63/142 (44%), Gaps = 3/142 (2%)
Query: 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL 129
E +DS ++ L+ ++T LK L W + +V K M G + ++ +L
Sbjct: 208 EAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTIL 267
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEEL 188
+ G ++EA +++ + + H P + F +I ++ RG + +M
Sbjct: 268 IGGFCRVGEIEEALKIYKE--MRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCF 325
Query: 189 GVRPNVSIVSMMGNAFQKLGML 210
G+ P+ I +M+ F + G++
Sbjct: 326 GLVPDGVIYTMVIGGFCRAGLM 347
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT-----KIFLDHLE 155
E + +Q+ ML++ + TY L++ + G LD+A +LW +IF +H
Sbjct: 414 EGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNH-- 471
Query: 156 GTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEK 215
+ + +I + +G E F +M G+ PN+ + + + + G + K +K
Sbjct: 472 ----VTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQK 527
Query: 216 LKKK 219
+K
Sbjct: 528 FLQK 531
>gi|356533844|ref|XP_003535468.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Glycine max]
Length = 813
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY L++ + G+L EA E + K+ + T + F+ MI+I N G E++ +
Sbjct: 275 TYNTLIDTYGKAGQLKEASETFAKMLKQGVAPTT-VTFNTMINICGNHGQLEEVSLLVRK 333
Query: 185 MEELGVRPNVSIVSMMGNAFQK---LGMLDKYEKLKKK 219
MEEL PN +++ + + K +GM KY ++ K+
Sbjct: 334 MEELRCSPNTRTYNILISLYAKHDDIGMATKYFEIMKE 371
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 74/184 (40%), Gaps = 6/184 (3%)
Query: 37 PRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALK 96
PR + K+ + T K CI + + V G ++ WE ++ K+
Sbjct: 70 PRKSKPEKSHTKCST--KRVSYGGCIPAILEALDAVLGVDEALGPWE---ERLSNKERSI 124
Query: 97 TLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEG 156
L+ + W R +++ +W KG Y ++L +L + E LW ++ +
Sbjct: 125 ILKEQLRWDRALEIFEWFNKKGHELNTIHYNIMLRSLGRARQWRRVESLWNEMNARGIAA 184
Query: 157 TPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
T + +I +Y G + M GV+P+ + ++ ++K G K E+
Sbjct: 185 TCST-YGTLIDVYSKGGRRDDALSWLDMMLGQGVQPDEVTMVIVVQLYKKAGEFQKAEEF 243
Query: 217 KKKY 220
KK+
Sbjct: 244 FKKW 247
>gi|56964861|ref|YP_176592.1| beta-N-acetylglucosaminidase [Bacillus clausii KSM-K16]
gi|56911104|dbj|BAD65631.1| beta-N-acetylglucosaminidase [Bacillus clausii KSM-K16]
Length = 1398
Score = 41.2 bits (95), Expect = 0.55, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 244 ELDSATEGKTNEVETTKNPNESSEEPEAAANLNESLEETEANTKELLEEADAISNESDIS 303
E + T+ T+E E + + +EPE A+ +E ET+ANT E E DA ++E D++
Sbjct: 1198 EQEPKTDASTDEQEPETDASTDEQEPETDASADEQEPETDANTDEQEPETDASADEQDLA 1257
Score = 38.9 bits (89), Expect = 3.3, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 241 PKYELDSATEGKTNE-VETTKNPNESSEEPEAAANLNESLEETEANTKELLEEADAISNE 299
P E DS E E E +P+ +EPE A+ +E ET+ANT E E DA ++E
Sbjct: 1128 PSEENDSTDESSLEEPQEPETDPSTDEQEPETDASADEQEPETDANTDEQEPETDASTDE 1187
Query: 300 SD 301
+
Sbjct: 1188 QE 1189
>gi|194689808|gb|ACF78988.1| unknown [Zea mays]
Length = 279
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161
+D + Q M +G T Y L++++ + +EAE LW ++ E P +
Sbjct: 3 RDDAKAKQALDLMREQGISPTNRIYTTLIDSMYKRKMTNEAESLWKEMVESECE--PDVA 60
Query: 162 FDKMISIYYN-RGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
+ ++YY G E++ E+ +ME GV+P+ + + + ++ K G L+
Sbjct: 61 TYNVKAMYYALHGKPEEVMEVMTEMEAAGVKPDTTTYNFLMTSYCKSGKLE 111
>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 678
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 12/154 (7%)
Query: 70 EEVYGAL--DSFIAWELEFPLI-TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTY 126
+ VYG L D I+ + +I K ++N + R +QV +G + T+
Sbjct: 414 DRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQV------RGVVPNLVTF 467
Query: 127 FLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADM 185
L+N +DG +D+A +L + + L+ P IF F ++ E+ E F +M
Sbjct: 468 NTLINGHCKDGAIDKARKLLESLLENGLK--PDIFTFSSIVDGLCQIKRTEEALECFTEM 525
Query: 186 EELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
E G+ PN I +++ + +G + + KL ++
Sbjct: 526 IEWGINPNAVIYNILIRSLCTIGDVARSVKLLRR 559
>gi|224119538|ref|XP_002318099.1| predicted protein [Populus trichocarpa]
gi|222858772|gb|EEE96319.1| predicted protein [Populus trichocarpa]
Length = 426
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY LL+A G ++W + + +EGT R+ F+ ++ + +G + + ++ +
Sbjct: 224 TYTTLLDAFRRAGDTKTLMDIWKLMMREKVEGT-RVTFNILLDGFAKQGHYMEARDVINE 282
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWE 226
++ G+ P V +M+ NA+ + G K +L K+ K E
Sbjct: 283 FKKFGLHPTVMTYNMLMNAYARGGQDSKLPQLLKEMATLKLE 324
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163
WK ++++ K M + G TY LLL+ L + G+ EA +L+ + ++ I +
Sbjct: 290 WKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSI-YG 348
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGM----LDKYEKLKKK 219
++ Y +G +M M G+ PN I +++ AF K M +D + K++++
Sbjct: 349 IILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQ 408
Query: 220 YPPP 223
P
Sbjct: 409 GLSP 412
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Query: 98 LENEKDWKRIIQVTKWMLSK----GQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDH 153
L+ D KR+ + +L + G + +Y LL ++ R +EA EL +
Sbjct: 137 LKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQ 196
Query: 154 LEGTP--RIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
+ P + ++ +I+ ++ G +K + +F DM + G+ PNV +++ + K ++D
Sbjct: 197 VRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVD 256
Query: 212 KYEKLKKK 219
+ E + ++
Sbjct: 257 RAEGVFQQ 264
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M++ G+ ++ TY ++LN L+++ +DEA +++ + L+ I F+ MI G
Sbjct: 615 MITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQ-VDIITFNIMIGALLKDG 673
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
E +FA + G+ P+V+ ++ + G L++++ +
Sbjct: 674 RKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGM 716
>gi|218184142|gb|EEC66569.1| hypothetical protein OsI_32743 [Oryza sativa Indica Group]
Length = 741
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 68/178 (38%), Gaps = 15/178 (8%)
Query: 31 AARGPRPRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLIT 90
AARGPRP I + C +GL V + G + F
Sbjct: 217 AARGPRPNL-----------AIFNAMIFGLCQRGLVRVSGGLLGVMGRFHVVPDACSYNI 265
Query: 91 VKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIF 150
+ K +D + M G T+ TY +L+N L +GR+ EA L+ ++
Sbjct: 266 LMKGHCLYGQAED---AFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEML 322
Query: 151 LDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+E I F+ +I Y G E A+M+ +G+ P+ +++ K G
Sbjct: 323 QAGVE-VNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFG 379
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 128 LLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEE 187
+L+ L DGRLD+A EL ++ + F+ +I+ Y G E+ FE++ M +
Sbjct: 406 MLICRLCWDGRLDDAWELLCSAIEKGVQVSVS-GFNALIAAYSKEGFDEEAFELYKTMNK 464
Query: 188 LGVRPNVSIVSMMGNAFQKLGMLDK 212
LG+ P+ S ++ + G LD+
Sbjct: 465 LGLAPSSSTLNYLIMGLCNRGRLDQ 489
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 126 YFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADM 185
Y ++ L G++ EA++++ K+F +E + + +I Y G EK F + M
Sbjct: 118 YTAVICGLCRCGKMMEADKVFNKMFSRGVE-PDEVTYTTLIDGYCKSGEMEKAFSLHNQM 176
Query: 186 EELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ G+ PNV + + + KLG +D +L
Sbjct: 177 VQSGLTPNVVTYTALADGLCKLGQVDTANEL 207
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M KG + TY L+N L + G + +A +L ++ + + I F ++ Y G
Sbjct: 211 MCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMY-PDTITFTTLMDAYCKTG 269
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
K E+ +M + G++P V +++ N F GML+ E+L
Sbjct: 270 EMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERL 312
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 84 LEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAE 143
LE + T + LK+ + + VTK M +K R Y +L++ A G + EA
Sbjct: 665 LEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAA 724
Query: 144 ELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGN 202
+L ++ + L P I + I+ G +K EI +ME G++PN+ + + N
Sbjct: 725 DLMQQMRKEGL--LPDIHTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLIN 782
Query: 203 AFQKLGM----LDKYEKLK-KKYPPPKWEYRYI 230
+ + M L +E++K + P K Y +
Sbjct: 783 GWARASMPEKALSCFEEMKLAGFKPDKAVYHCL 815
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
T+ +L++ ++GR+ EA+ + + + ++ P + ++ ++ Y+ K IF
Sbjct: 179 TFTILVDGFCKEGRVKEAKNVLAMMMIQGIK--PGVVTYNSLMDGYFLVKQVNKAKSIFN 236
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
M +LGV P++ S++ N F K+ M+D+ +L K
Sbjct: 237 TMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLK 271
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T ++ L D ++ K M+S G + TY +LL+ L + G+L++A ++
Sbjct: 432 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE- 490
Query: 149 IFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+L + P I+ ++ MI G E +++F + GV+PNV I + M + F +
Sbjct: 491 -YLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 549
Query: 208 GMLDKYEKL 216
G+ ++ + L
Sbjct: 550 GLKEEADAL 558
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 5/160 (3%)
Query: 60 TCIKGL--SNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSK 117
T I GL N E +D +A + L T + L D + + K M
Sbjct: 191 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 250
Query: 118 GQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHE 176
+ Y +++ L + +D+A +L+ K+ ++ P +F ++ +IS N G
Sbjct: 251 KIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK--PDVFTYNSLISCLCNYGRWS 308
Query: 177 KMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ +DM E + PNV + + +AF K G L + EKL
Sbjct: 309 DASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKL 348
>gi|297733647|emb|CBI14894.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 10 PFTKIFEPIKISRNARS-LVVCAARGPRPRYPRVWKARKRIGTISKSAKLVTCIKGLSNV 68
P T+ F ++I +A S L C RY WK + T + VTC ++ +
Sbjct: 234 PKTRQFRDVRIYNSAISGLSSCG------RYDDAWKVYDEMETNNIRPDHVTCSIMITVM 287
Query: 69 KEEVYGALDSFIAWE---------LEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQ 119
+++ + A D AWE +++ L + +K+ +E + + M KG
Sbjct: 288 RKDGHSAKD---AWEFFQRMNRKGVKWSLEVLGALIKSFCDEGLKNEALIIQSEMEKKGI 344
Query: 120 GRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMF 179
Y L++A ++ R++EAE L+ ++ + T + ++ Y+R M ++
Sbjct: 345 SSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATY--NILMDAYSRRMQPEII 402
Query: 180 E-IFADMEELGVRPNVSIVSMMGNAFQK 206
E + +M+++G+ PNV + + +A+ +
Sbjct: 403 ENLLLEMQDMGLEPNVKSYTCLISAYGR 430
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY LL+A G ++W + D +EGT R+ F+ ++ + +G + + ++ +
Sbjct: 491 TYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGT-RVTFNILLDGFAKQGHYMEARDVIFE 549
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
++G +P V +M+ NA+ + G + +L K+
Sbjct: 550 FGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKE 584
>gi|115452331|ref|NP_001049766.1| Os03g0284900 [Oryza sativa Japonica Group]
gi|108707551|gb|ABF95346.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|108707553|gb|ABF95348.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548237|dbj|BAF11680.1| Os03g0284900 [Oryza sativa Japonica Group]
gi|215686909|dbj|BAG90779.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 84 LEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAE 143
L+ + T +K + K WK + + M S G + T+ L+NA A G +D A
Sbjct: 350 LKLDVFTYSTMMKVFADAKMWKLASDIKQDMQSAGVRLNLVTWSSLINAYANSGLVDRAI 409
Query: 144 ELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVS 195
E+ ++ D + T F+ +++ +++ F +F D +E GV+ ++S
Sbjct: 410 EILEEMTRDGCQPTAPC-FNIILTGCVKSCQYDRAFRLFYDWKEYGVKISLS 460
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 2/129 (1%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
IT + L + + + T+ ML KG + TY L+ L D ++D A LW +
Sbjct: 511 ITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQ 570
Query: 149 IFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL-GVRPNVSIVSMMGNAFQKL 207
I LD T + + +I + G ++ ++ ++M+E PNV + + + F +
Sbjct: 571 I-LDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYET 629
Query: 208 GMLDKYEKL 216
G DK L
Sbjct: 630 GCFDKAASL 638
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 13/168 (7%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-F 162
WK ++V K M S G + ++AL R+ EA++++ + L + P I +
Sbjct: 243 WKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPK--PNIISY 300
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKK 218
++ Y G M + M G+ PN +++ NA+ + GM+DK +E ++
Sbjct: 301 STLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQN 360
Query: 219 K-YPPPKWEYRYIKGKRVRIPAKPKYELDSATEGKTNEVETTKNPNES 265
K P + + RI LD A + V+ P+E+
Sbjct: 361 KGMIPDTVTFATVISSLCRIG-----RLDDALHKFNHMVDIGVPPSEA 403
>gi|218192576|gb|EEC75003.1| hypothetical protein OsI_11066 [Oryza sativa Indica Group]
Length = 668
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 84 LEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAE 143
L+ + T +K + K WK + + M S G + T+ L+NA A G +D A
Sbjct: 350 LKLDVFTYSTMMKVFADAKMWKLASDIKQDMQSAGVRLNLVTWSSLINAYANSGLVDRAI 409
Query: 144 ELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVS 195
E+ ++ D + T F+ +++ +++ F +F D +E GV+ ++S
Sbjct: 410 EILEEMTRDGCQPTAPC-FNIILTGCVKSCQYDRAFRLFYDWKEYGVKISLS 460
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 41.2 bits (95), Expect = 0.59, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY +++ LA GRL +A L L ++ + ++ +IS Y G+ ++F ++ D
Sbjct: 263 TYVTIISTLASMGRLSDARTL-----LKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKD 317
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
M+ G+ P S + M +A + D+ +++
Sbjct: 318 MKRQGLMPTRSTFASMLSAAASMTAFDEGQQI 349
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT---PRIF-FDKMISIYYNRGMHEKMFE 180
TY LL++A R + A +I L +E + P + F ++++ Y ++G +K F+
Sbjct: 378 TYSLLIDAYGNAERWESA-----RIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQ 432
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ +ME+ GVRP+ +++ + F K LD
Sbjct: 433 VLREMEDSGVRPDRIFYNVLIDTFGKFNCLDH 464
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M+ KG T+ +++N+ + R D+ + L T + L + + +I IY G
Sbjct: 507 MMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNA-VTYTTLIDIYGKSG 565
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ E DM+ G++P+ ++ + + NA+ + G+ D+
Sbjct: 566 RFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQ 604
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI 149
T + + +++ W + + M S+G TY L++ + GR D+A E +
Sbjct: 518 TFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDM 577
Query: 150 FLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
L+ + ++ + +++ Y RG+ ++ F M + G++P++ ++ + NAF K
Sbjct: 578 KAAGLKPSSTMY-NALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGK 633
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 93 KALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD 152
+ L + ++ +W++ QV + M G Y +L++ + LD A + ++ +
Sbjct: 416 RILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSE 475
Query: 153 HLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
+E I ++ ++ + G H++ E+F +M E G P + ++M N+F
Sbjct: 476 GIE-PDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSF 526
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M S G + Y LL L R +EAE L ++F D + F+ ++ G
Sbjct: 313 MPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMF-DKDCPLDDVTFNILVDFLCQNG 371
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+ +++ E+ M E G P+V + + N F K G++D+ L +
Sbjct: 372 LVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRS 417
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 5/158 (3%)
Query: 62 IKGLSNVK--EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQ 119
IKGL V EE G L +T + E + ++ I+V M KG
Sbjct: 375 IKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434
Query: 120 GRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKM 178
+ T+ L++ + G+++ A L+T++ + L P + + +I ++ G ++
Sbjct: 435 EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL--LPDVVAYTALIDGHFKDGNTKEA 492
Query: 179 FEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
F + +M+E G+ PNV +S + + K G + KL
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP-R 159
EK R I+ M+S+G + TY LL AL +DG++D A E+ + L +P
Sbjct: 404 EKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ--LSSKGCSPVL 461
Query: 160 IFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
I ++ +I G E+ ++ +M G++P++ S + + + G +D+
Sbjct: 462 ITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDE 514
>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
Length = 864
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPR-IFFDKMISIYYNRGMHEKMFEIFADMEE 187
L++ L + G+ DEAE ++ L L P I + MI Y G + + DME+
Sbjct: 267 LIDGLFKAGKSDEAEAMFCT--LAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEK 324
Query: 188 LGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
V PNV S + N + K GMLD ++ KK
Sbjct: 325 KQVVPNVVTYSSIINGYTKKGMLDVAVRIMKK 356
>gi|413934892|gb|AFW69443.1| hypothetical protein ZEAMMB73_914225 [Zea mays]
Length = 561
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 15/113 (13%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT-------KIFLDHLEGTPRIFFDKMI 166
M G R TY LLL A A GRL+++ W I LD + ++
Sbjct: 149 MADDGVARNRRTYTLLLGAYARAGRLEDS--WWVLGEMRRWGIRLDTAG------YSMLV 200
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+Y + GM +K ++ +M+E+GV +V I S + + F K G L ++ K
Sbjct: 201 RLYRDNGMWKKATDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRMFDK 253
>gi|356519449|ref|XP_003528385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15820-like [Glycine max]
Length = 763
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 17/129 (13%)
Query: 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTY 126
+V +E+YG L W L + ++ D +RI ++ + ML G
Sbjct: 278 DVHKEIYGGL----IW------------LHSYQDSIDKERIAELREAMLRAGFEEDREVL 321
Query: 127 FLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADME 186
+L A A +G ++EAE+ W K+ L+ P + F + +Y GM K +IF +M+
Sbjct: 322 LSILRACAREGEVEEAEKSWVKL-LEFENDPPALAFVYKMEVYSKVGMPMKSLDIFREMQ 380
Query: 187 ELGVRPNVS 195
R +V+
Sbjct: 381 SKLGRTDVA 389
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 165 MISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
++S+Y+N +H+K+ E F E RPN +I S+ N+ K+G +DK E +
Sbjct: 429 LLSMYFNLELHDKLEESFYKCLE-KCRPNCAIYSIYLNSLVKIGNIDKAEDI 479
>gi|32489921|emb|CAE05513.1| OSJNBa0038P21.6 [Oryza sativa Japonica Group]
Length = 648
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 13/168 (7%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-F 162
WK ++V K M S G + ++AL R+ EA++++ + L + P I +
Sbjct: 150 WKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPK--PNIISY 207
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKK 218
++ Y G M + M G+ PN +++ NA+ + GM+DK +E ++
Sbjct: 208 STLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQN 267
Query: 219 K-YPPPKWEYRYIKGKRVRIPAKPKYELDSATEGKTNEVETTKNPNES 265
K P + + RI LD A + V+ P+E+
Sbjct: 268 KGMIPDTVTFATVISSLCRIG-----RLDDALHKFNHMVDIGVPPSEA 310
>gi|14488297|gb|AAK63878.1|AC074105_7 Putative salt-inducible protein [Oryza sativa]
gi|222612440|gb|EEE50572.1| hypothetical protein OsJ_30721 [Oryza sativa Japonica Group]
Length = 854
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 68/178 (38%), Gaps = 15/178 (8%)
Query: 31 AARGPRPRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLIT 90
AARGPRP I + C +GL V + G + F
Sbjct: 218 AARGPRPNL-----------AIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDACSYNI 266
Query: 91 VKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIF 150
+ K +D + M G T+ TY +L+N L +GR+ EA L+ ++
Sbjct: 267 LMKGHCLYGQAED---AFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEML 323
Query: 151 LDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+E I F+ +I Y G E A+M+ +G+ P+ +++ K G
Sbjct: 324 QAGVE-VNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFG 380
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 128 LLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEE 187
+L+ L DGRLD+A EL ++ + F+ +I+ Y G E+ FE++ M +
Sbjct: 407 MLICRLCWDGRLDDAWELLCSAIEKGVQVSVS-GFNALIAAYSKEGFDEEAFELYKTMNK 465
Query: 188 LGVRPNVSIVSMMGNAFQKLGMLDK 212
LG+ P+ S ++ + G LD+
Sbjct: 466 LGLAPSSSTLNYLIMGLCNRGRLDQ 490
>gi|225430854|ref|XP_002269078.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01390-like [Vitis vinifera]
Length = 519
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T + N+ D +R ++V K M +KG T+ +Y + L ++ R+ EA +++ +
Sbjct: 102 VTYTSLMHWFSNDGDIERAVRVWKEMKAKGCCLTVVSYTAYMKILFDNKRVKEAADVYKE 161
Query: 149 IFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+ P + + ++ G ++ EIF+ M+E GV+P+ + +++ F K
Sbjct: 162 MLQSGC--APNCYTYTVLMEHLTGSGKYKAALEIFSRMQEAGVQPDKATCNILIEKFCKT 219
Query: 208 G 208
G
Sbjct: 220 G 220
>gi|449450908|ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
gi|449517541|ref|XP_004165804.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
Length = 527
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 22/164 (13%)
Query: 61 CIKGLSNVKEEVYGALDSFIA----------WELEFPLITVKKAL-KTLENEKDWKRIIQ 109
CI ++ ++Y +++++ W LI + L K E E+ W IIQ
Sbjct: 267 CIVATAHAVAKLYTVVEAYVEALEKSIAGNNWSTYDVLIILYGYLNKEKELERTWG-IIQ 325
Query: 110 VTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDH-LEGTPRIFFDKMISI 168
+ SK ++ L + A G L AEELW ++ ++ T + F+ ++S+
Sbjct: 326 GFPHIPSK-------SFILAIEAFGRIGLLSRAEELWLEMKTKRGIKATDQ--FNSILSV 376
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
Y G+ +K EIF +E G +PN + K G++++
Sbjct: 377 YCRHGLIKKATEIFRKIEANGCKPNAITFRHLAFGCLKAGLVEE 420
>gi|242047208|ref|XP_002461350.1| hypothetical protein SORBIDRAFT_02g001400 [Sorghum bicolor]
gi|241924727|gb|EER97871.1| hypothetical protein SORBIDRAFT_02g001400 [Sorghum bicolor]
Length = 560
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 106 RIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI----- 160
R Q+ ML +G T G Y L+ A G LD+A +L L+ ++G+P
Sbjct: 224 RAHQLFDEMLQQGCQPTPGLYTALIGAYCRSGLLDDALQL-----LNDMKGSPLCQPDVY 278
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ +I + + + ++ DM E + PN +++ + + K G LD EK+
Sbjct: 279 TYSTIIKACVDATRFDLIDVMYKDMAERSIAPNTVTQNIVLSGYGKAGRLDDMEKV 334
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 31/130 (23%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI--------------FLDH--LEGT 157
ML +G TY L+N L + GR+D A++L+ +I F+ H L+
Sbjct: 313 MLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDA 372
Query: 158 PRIF---------------FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGN 202
+ ++ +I Y+ G+ E+ DM G +PNV +++ +
Sbjct: 373 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVD 432
Query: 203 AFQKLGMLDK 212
F KLG +D+
Sbjct: 433 GFCKLGKIDE 442
>gi|414877568|tpg|DAA54699.1| TPA: hypothetical protein ZEAMMB73_211194, partial [Zea mays]
Length = 709
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEG----TPRIFFDKMISIYYNRGMHEKMFE 180
TY +L++ LA+ G DEA FL EG ++ + ++ + G + E
Sbjct: 306 TYNMLIHGLAKHGHADEA-----LTFLRESEGKRFRVDQVGYSAIVHSFCLNGRMSEAKE 360
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
I +M G RP+V S + + F ++G LD+ K+ K
Sbjct: 361 IIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMK 398
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 9/126 (7%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI-FFDKMISIYYNR 172
M+ +G + Y L++ L DG +DEA +W ++ D + P + + +I +
Sbjct: 340 MIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIR--PNVTTYSTIIYGFAKS 397
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL-----KKKYPPPKWEY 227
G E + M G RPNV + + M + ++ M D+ L PP +
Sbjct: 398 GDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITF 457
Query: 228 -RYIKG 232
+IKG
Sbjct: 458 NNFIKG 463
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 123 MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT--PRIFFDKMISIYYNRGMHEKMFE 180
+ TY L+ + + +++AEEL+ ++ +G R F+ M+ IY N G H K
Sbjct: 1023 LDTYKSLVASFGKQQLVEQAEELFEEL---QSKGCKLDRSFYHTMMKIYRNSGSHSKAER 1079
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+F+ M++ GV P ++ + ++ ++ G + EK+
Sbjct: 1080 LFSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKV 1115
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
TY L++A + L+EA +++ + H + P ++ ++ MIS+Y G+ K ++F
Sbjct: 328 TYNTLISACSRASNLEEAAKVFDDMEAHHCQ--PDLWTYNAMISVYGRCGLSGKAEQLFN 385
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
D+E G P+ + + AF + G ++K +++
Sbjct: 386 DLESRGFFPDAVSYNSLLYAFAREGNVEKVKEI 418
>gi|410110067|gb|AFV61113.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
herrerae]
Length = 433
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI ++ + + E+F M LG
Sbjct: 330 IHILAGAGRIEEATYVFRQA-IDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMRGLG 388
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL LDK
Sbjct: 389 YFPDSNVIALVLNAYGKLHELDK 411
>gi|302801820|ref|XP_002982666.1| hypothetical protein SELMODRAFT_421954 [Selaginella moellendorffii]
gi|300149765|gb|EFJ16419.1| hypothetical protein SELMODRAFT_421954 [Selaginella moellendorffii]
Length = 796
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIF--LDHLEGTPRI-FFDKMISIYY 170
M ++G Y L+ + GRL E+ TK F + LE P + F +I Y
Sbjct: 266 MKAEGHQPNAVAYSALIAGQLKSGRL----EIGTKYFEEMRSLEIRPLLGTFASLIEAYC 321
Query: 171 NRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLK 217
G E + F DME +PN+ I + + +A K GMLD YE+++
Sbjct: 322 KSGRLETGLKFFKDMEAFNYKPNLCIYAALVDAHAKAGMLDAALEFYERMR 372
>gi|255553939|ref|XP_002518010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542992|gb|EEF44528.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 824
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
LL+ A+ G L A +L+ G + F M+ Y GM E+ IF+DM +L
Sbjct: 563 LLDLYAKCGDLGYAFKLFHSN-----PGRDLVVFTAMVGGYAMHGMGEEALRIFSDMLDL 617
Query: 189 GVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
G++P+ +++ + +A G++D+ K+
Sbjct: 618 GIKPDHIVITAVLSACCHAGLVDEGLKI 645
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
TY ++++ + GR+ EA L + +++L+ +P + ++ +I+ + G E+ F++
Sbjct: 304 TYNVMISGFCKQGRIAEAMRLREE--MENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIE 361
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+ME G++PN ++M F K G +D+ +K +K
Sbjct: 362 EMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRK 397
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP-R 159
EK R I+ M+S+G + TY LL AL +DG++D A E+ + L +P
Sbjct: 347 EKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ--LSSKGCSPVL 404
Query: 160 IFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
I ++ +I G E+ ++ +M G++P++ S + + + G +D+
Sbjct: 405 ITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDE 457
>gi|414869157|tpg|DAA47714.1| TPA: hypothetical protein ZEAMMB73_516901 [Zea mays]
Length = 853
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
TY +++N L + G+L A +L+ ++ + TP + ++ MI++ +E + +++
Sbjct: 467 TYSVMVNCLGKGGQLAAAYKLFCEMIENGC--TPNLVTYNIMIALQAKARNYENVVKLYK 524
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKY 243
DM+ G RP+ S++ G LD+ E + +I+ +R P +P Y
Sbjct: 525 DMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAV------------FIEMRRDWAPDEPVY 572
Query: 244 ELDSATEGKTNEVE 257
L GK V+
Sbjct: 573 GLLVDLWGKAGNVD 586
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI-FLDHLEGTPRI 160
+ W RI+++ M SKG T +++A +G LDEA + ++ F + GT +
Sbjct: 265 RSWDRILELLDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGT--V 322
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
++ M+ ++ G++ + I +ME+ P+ + + + + G LD+
Sbjct: 323 TYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDE 374
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 17/195 (8%)
Query: 27 LVVCAARGPRPRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEV-----YGAL--DSF 79
L VC+ G +V + K G T I + EV YG + F
Sbjct: 468 LAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGF 527
Query: 80 IAWELEFPLITVKKAL-KTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGR 138
P +T AL L DWK V + M +KG +Y LLL+ ++ G
Sbjct: 528 T------PCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGN 581
Query: 139 LDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE-IFADMEELGVRPNVSIV 197
+ E++ +I+ H+ P + + + ++ H + E F +++ G +P++ ++
Sbjct: 582 VKGIEKVEKEIYDGHV--FPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVI 639
Query: 198 SMMGNAFQKLGMLDK 212
+ M + F + M K
Sbjct: 640 NSMLSMFARNKMFSK 654
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFF 162
D K+ +++ +L KG TY +L+ GR++EA EL T++ D + I +
Sbjct: 768 DMKKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVS-PDCITY 825
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPN 193
MIS R +K E++ M E G+RP+
Sbjct: 826 TTMISELCRRNDVKKAIELWNSMTEKGIRPD 856
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 116 SKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMH 175
+ G ++ + ++ A G ++ A +L+ +H+ I + MIS Y G
Sbjct: 274 TMGTSKSAAAWSSMVCGYARCGEINVARKLF-----NHMHERDVISWTAMISGYSQAGQC 328
Query: 176 EKMFEIFADMEELGVRPN-VSIVSMMGNAFQKLGMLDKYEKLKKKY 220
+ E+F +ME LG++P+ V++V+++ +A +LG D ++L +Y
Sbjct: 329 SEALELFKEMEALGIKPDEVTLVAVL-SACARLGAFDLGKRLYHQY 373
>gi|302798857|ref|XP_002981188.1| hypothetical protein SELMODRAFT_420654 [Selaginella moellendorffii]
gi|300151242|gb|EFJ17889.1| hypothetical protein SELMODRAFT_420654 [Selaginella moellendorffii]
Length = 796
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIF--LDHLEGTPRI-FFDKMISIYY 170
M ++G Y L+ + GRL E+ TK F + LE P + F +I Y
Sbjct: 266 MKAEGHQPNAVAYSALIAGQLKSGRL----EIGTKYFEEMRSLEIRPLLGTFASLIEAYC 321
Query: 171 NRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLK 217
G E + F DME +PN+ I + + +A K GMLD YE+++
Sbjct: 322 KSGRLETGLKFFKDMEAFNYKPNLCIYAALVDAHAKAGMLDAALEFYERMR 372
>gi|222617300|gb|EEE53432.1| hypothetical protein OsJ_36514 [Oryza sativa Japonica Group]
Length = 607
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
TY L+N + GRLD L + + P + + +I IY GMH F ++
Sbjct: 194 TYNSLINGYGKQGRLDIVSILVQDMRKRGV--APSVLTYSTLIDIYSKAGMHGDAFNVYL 251
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLD 211
D +E G++P+V + S + K G+++
Sbjct: 252 DFKESGLKPDVVLFSSFIDTLAKNGLIE 279
>gi|414887018|tpg|DAA63032.1| TPA: hypothetical protein ZEAMMB73_524388 [Zea mays]
Length = 59
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRI 237
MEELGVRP+ +G AF G +K + + +KY KW+Y + G+RVR+
Sbjct: 1 MEELGVRPDEDTARRIGKAFVASGQEEKEKHVLEKY-LKKWKYIHFNGERVRV 52
>gi|414591140|tpg|DAA41711.1| TPA: hypothetical protein ZEAMMB73_113775, partial [Zea mays]
Length = 340
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 76/169 (44%), Gaps = 4/169 (2%)
Query: 50 GTISKSAKLVTCIKGL--SNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRI 107
G++S A V + GL S ++ LD + + L +KD R+
Sbjct: 173 GSVSPFAASVV-VDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRV 231
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167
++ + M ++G T+GTY +L+++L+ + + E L+ ++ +++ G + +I+
Sbjct: 232 QEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDV-YLYTAVIN 290
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
Y G + ++ + GV PN ++ F K+G ++ E L
Sbjct: 291 AYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEML 339
>gi|297805886|ref|XP_002870827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316663|gb|EFH47086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L +L E+ + ++ K M+ G + Y +L++A ++ G ++AE+L ++ ++
Sbjct: 175 LNSLVKERLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSE--MEEK 232
Query: 155 EGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKY 213
P IF ++ +IS+Y + MH + + ME GV P++ + + + F + G + +
Sbjct: 233 GVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPDIVTYNSLIHGFSREGRMREA 292
Query: 214 EKLKKK 219
+L +K
Sbjct: 293 TRLFRK 298
>gi|296087908|emb|CBI35191.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T + L + + I + + M++ GQ + TY +LL+ L ++ LD+A L
Sbjct: 46 VTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKA 105
Query: 149 IFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
I +L+ +I+ +I G E ++F+++ G++PNV ++M + K G
Sbjct: 106 IEGSNLDPDIQIY-TIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRG 164
Query: 209 MLDKYEKL 216
+LD+ KL
Sbjct: 165 LLDEATKL 172
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 40.8 bits (94), Expect = 0.72, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
M+SKG + TY LL+ L + G+LDEA L + + +P I ++ +I +
Sbjct: 974 MVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQR--MTRSGCSPNIVTYNTIIDGHCKL 1031
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
G ++ + + +M + G +PNV +++ +AF K G
Sbjct: 1032 GRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCG 1067
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
E K ++ M S G + Y LL L R +E EEL ++F D +
Sbjct: 310 EGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMF-DKDCPLDDV 368
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
F+ ++ + G+ +++ E+ M G P+V + + N F K G++D+ L K
Sbjct: 369 TFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 426
>gi|449469755|ref|XP_004152584.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Cucumis sativus]
Length = 708
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
ML +G ++ TY LL+A G ++W + + + GT R+ F+ ++ + G
Sbjct: 496 MLREGLKPSIETYTTLLDAFRRAGDTVSLMKIWKLMIREKVLGT-RVTFNTLLDGFAKHG 554
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+ + ++ ++ +++G++P V +M+ NA+ + G
Sbjct: 555 HYVEARDVISEFDKIGLQPTVMTYNMLMNAYARGG 589
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 113 WMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNR 172
WM+ G +GTY ++L L ++ D+A ++ + L R F + MI
Sbjct: 581 WMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTF-NIMIDALLKG 639
Query: 173 GMHEKMFEIFADMEELGVRPNV 194
G H++ ++FA + G+ PNV
Sbjct: 640 GRHDEAKDLFASLLARGLVPNV 661
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY L++ DG++DEA +L + LD ++ + ++ +I+ Y G E +F
Sbjct: 488 TYTTLIDGYCLDGKVDEATKLLEGMVLDGVK-PNEVTYNTIINGYCKNGRIEDACSLFRQ 546
Query: 185 MEELGVRPNVSIVS-MMGNAFQ 205
M GV P + I S ++ FQ
Sbjct: 547 MASKGVNPGIVIYSTILHGLFQ 568
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 116 SKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMH 175
SKG TY LL A A +G +D+ +E+ + G + ++ +I +Y RG H
Sbjct: 332 SKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGF-GKDEMTYNTIIHMYGKRGQH 390
Query: 176 EKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML 210
+ F++++DM+ G P+ +++ ++ K M+
Sbjct: 391 DLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMI 425
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
TY L++A + + L+EA +++ + + P ++ ++ MIS+Y GM + +F
Sbjct: 271 TYNTLISACSRESNLEEAVKVYNDMVAHRCQ--PDLWTYNAMISVYGRCGMSREAGRLFK 328
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
D+E G P+ + + AF + G +DK +++
Sbjct: 329 DLESKGFLPDAVTYNSLLYAFAREGNVDKVKEI 361
>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
Length = 846
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 128 LLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF--FDKMISIYYNRGMHEKMFEIFADM 185
+L+ L D RLD+A EL +G P F+ +I+ Y G+HE+ FE++ M
Sbjct: 396 MLVCRLCWDCRLDDAWELLRGAIE---QGAPLSVTGFNALIAAYSKEGLHEEAFELYRIM 452
Query: 186 EELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+LG+ P+ S + + G LD+ + L
Sbjct: 453 NKLGLAPSSSTFNYLIMGLCNQGRLDEAQLL 483
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 29/156 (18%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEG---TPRIF-FDKMISIYYNRGMHEKMFE 180
+Y ++N L + G LD A + LDH+ TP + + +I + G E+
Sbjct: 216 SYTTVINGLCKSGDLDSASRM-----LDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMG 270
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL-----KKKYPPPKWEYR-----YI 230
+ M +LG RPN+ + + A +LG + K E + ++ + P Y
Sbjct: 271 LLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLC 330
Query: 231 KGKRVRIPAKPKYELDSATEGKTNEVETTKNPNESS 266
K +RV+ K K D VE PN SS
Sbjct: 331 KAERVK---KAKAVFDRM-------VERGCTPNASS 356
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
LL++ + G LD A L+ + + G + F+ MI+ Y N G++E+ E+F +M+ L
Sbjct: 181 LLDSYFKTGGLDSARRLFLE-----MCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNL 235
Query: 189 GVRPN 193
G +P+
Sbjct: 236 GFKPS 240
>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g04760, chloroplastic-like [Glycine max]
Length = 531
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
+IT L++L N+ W+ ++ M++KG + TY +L+++L DG+++E L
Sbjct: 228 VITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLK 287
Query: 148 KIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNV 194
+ LE P + +D +I++ G + E+ M G P++
Sbjct: 288 DMKKKGLE--PDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDI 333
>gi|222624701|gb|EEE58833.1| hypothetical protein OsJ_10405 [Oryza sativa Japonica Group]
Length = 483
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 84 LEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAE 143
L+ + T +K + K WK + + M S G + T+ L+NA A G +D A
Sbjct: 165 LKLDVFTYSTMMKVFADAKMWKLASDIKQDMQSAGVRLNLVTWSSLINAYANSGLVDRAI 224
Query: 144 ELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVS 195
E+ ++ D + T F+ +++ +++ F +F D +E GV+ ++S
Sbjct: 225 EILEEMTRDGCQPTAPC-FNIILTGCVKSCQYDRAFRLFYDWKEYGVKISLS 275
>gi|357125122|ref|XP_003564244.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Brachypodium distachyon]
Length = 502
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 15/122 (12%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD-KMISIYYNR 172
M+ +G + +Y L++A + G D A L LD ++ TP D + SI
Sbjct: 177 MVDEGCAPNLESYTALVSAYSRSGSFDRAFSL-----LDRMKATPGCRPDVQTYSILIKS 231
Query: 173 GMH----EKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEK-----LKKKYPPP 223
+H +K+ ++ ADM G+RPN + + +A+ K G + E L +K P
Sbjct: 232 CLHAYDFDKVKDLLADMACGGIRPNTVTYNTLVDAYGKAGRFAEMESTLLEMLSEKCKPD 291
Query: 224 KW 225
W
Sbjct: 292 VW 293
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T + +D V K M+S G + TY +LL+ L ++G+L +A ++
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 493
Query: 149 IFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+ +E P I+ ++ MI G E +E+F ++ GV PNV + M + F +
Sbjct: 494 LQRSTME--PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRK 551
Query: 208 GMLDKYEKLKKK 219
G ++ + L KK
Sbjct: 552 GSKEEADSLLKK 563
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 10/178 (5%)
Query: 58 LVTCIKGL--SNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWML 115
T I GL N E +D + + L+T + L D + + K M
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME 250
Query: 116 SKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGM 174
+ Y +++ L + +D+A L+T+ +D+ P +F + +IS N G
Sbjct: 251 KGKIEADVVIYNTIIDGLCKYKHMDDALNLFTE--MDNKGIRPDVFTYSSLISCLCNYGR 308
Query: 175 HEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL-----KKKYPPPKWEY 227
+ +DM E + PNV S + +AF K G L + EKL K+ P + Y
Sbjct: 309 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 366
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
+Y ++N+L GRLDEA EL+ + + L +P + ++ ++ Y G +EK +F
Sbjct: 173 SYTTMINSLGRSGRLDEAVELFEE--MKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFV 230
Query: 184 DMEELGVRPNV----SIVSMMG 201
ME+ G P++ +++ M G
Sbjct: 231 GMEDEGCIPDLYTYNTVIDMCG 252
>gi|125602283|gb|EAZ41608.1| hypothetical protein OsJ_26140 [Oryza sativa Japonica Group]
Length = 524
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT--PRIF--FDKMISIYYNRGMHEKMFE 180
++ L + A + G +D+AEE+W K E T P++ F+ ++S+Y G+ +K
Sbjct: 325 SFILAIEAFGKVGSIDQAEEIWGK-----FESTRKPKLTEQFNSILSVYCRHGLVDKASA 379
Query: 181 IFADMEELGVRPN 193
+F +M G +PN
Sbjct: 380 VFKEMRANGCQPN 392
>gi|449523327|ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like, partial [Cucumis sativus]
Length = 1090
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T+ L N K+I ++ +L + + L++ A+ G + +++
Sbjct: 524 VTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDTYAKSGNIK-----YSR 578
Query: 149 IFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+ + I ++ +I+ Y G + F++F M LG+RPN ++ + +A+ G
Sbjct: 579 TVFNGMSSKDIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAG 638
Query: 209 MLDK 212
M+DK
Sbjct: 639 MVDK 642
>gi|222624263|gb|EEE58395.1| hypothetical protein OsJ_09560 [Oryza sativa Japonica Group]
Length = 1276
Score = 40.8 bits (94), Expect = 0.80, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161
K+W++ V ML ++ +Y L+ + E R+ A L ++ D + T I
Sbjct: 903 KNWRKADAVLCMMLKMQNSLSISSYRFLVRRMCEQSRISSALRL-KELIQDRDKSTELIL 961
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
++ +I + R ++ + DM+ G P+ + + N F K G +D
Sbjct: 962 YNILIFYLFRRRHILQVHNLLKDMKSNGFSPDTTTYDFLVNGFHKSGDVD 1011
>gi|218192165|gb|EEC74592.1| hypothetical protein OsI_10174 [Oryza sativa Indica Group]
Length = 1276
Score = 40.8 bits (94), Expect = 0.80, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161
K+W++ V ML ++ +Y L+ + E R+ A L ++ D + T I
Sbjct: 903 KNWRKADAVLCMMLKMQNSLSISSYRFLVRRMCEQSRISSALRL-KELIQDRDKSTELIL 961
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
++ +I + R ++ + DM+ G P+ + + N F K G +D
Sbjct: 962 YNILIFYLFRRRHILQVHNLLKDMKSNGFSPDTTTYDFLVNGFHKSGDVD 1011
>gi|115450979|ref|NP_001049090.1| Os03g0168400 [Oryza sativa Japonica Group]
gi|19071617|gb|AAL84284.1|AC073556_1 putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
gi|108706387|gb|ABF94182.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113547561|dbj|BAF11004.1| Os03g0168400 [Oryza sativa Japonica Group]
Length = 1337
Score = 40.8 bits (94), Expect = 0.80, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161
K+W++ V ML ++ +Y L+ + E R+ A L ++ D + T I
Sbjct: 896 KNWRKADAVLCMMLKMQNSLSISSYRFLVRRMCEQSRISSALRL-KELIQDRDKSTELIL 954
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
++ +I + R ++ + DM+ G P+ + + N F K G +D
Sbjct: 955 YNILIFYLFRRRHILQVHNLLKDMKSNGFSPDTTTYDFLVNGFHKSGDVD 1004
>gi|449470126|ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Cucumis sativus]
Length = 1463
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T+ L N K+I ++ +L + + L++ A+ G + +++
Sbjct: 524 VTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDTYAKSGNIK-----YSR 578
Query: 149 IFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+ + I ++ +I+ Y G + F++F M LG+RPN ++ + +A+ G
Sbjct: 579 TVFNGMSSKDIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAG 638
Query: 209 MLDK 212
M+DK
Sbjct: 639 MVDK 642
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L+ L NE W+ ++ ML KG TY L+ AL DG++DEA+ + K+ +
Sbjct: 293 LRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVL-KVMKEKA 351
Query: 155 EGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNV----SIVSMM---GNAFQKL 207
+D +IS G + E DM G P++ SI++ + GNA + L
Sbjct: 352 LAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEAL 411
Query: 208 GMLDKYEKLKKKYPPP 223
+ +EKL + PP
Sbjct: 412 NI---FEKLGEVGCPP 424
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 60/145 (41%), Gaps = 34/145 (23%)
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI------------ 149
+ W +I+++ M S+G T +L+A +G +DEA E ++ +
Sbjct: 272 RSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTY 331
Query: 150 -FLDHLEGTPRIF---------------------FDKMISIYYNRGMHEKMFEIFADMEE 187
L H+ G IF ++++++ Y G HE+ + M
Sbjct: 332 NALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMAS 391
Query: 188 LGVRPNVSIVSMMGNAFQKLGMLDK 212
G+ PN + + NA+ ++G +DK
Sbjct: 392 KGIMPNAVTYTTIINAYGRVGDIDK 416
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 65/144 (45%), Gaps = 1/144 (0%)
Query: 76 LDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAE 135
LD + E ++T + + ++ D ++V + S G TY +L +L
Sbjct: 218 LDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCS 277
Query: 136 DGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVS 195
R +EA++L TK+F + + F+ +I+ +G + ++ A M E G P++
Sbjct: 278 SERWEEADKLLTKMFSNDC-APDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDII 336
Query: 196 IVSMMGNAFQKLGMLDKYEKLKKK 219
S + + K +D+ KL K+
Sbjct: 337 TYSSIMDGLCKERRVDEAIKLLKE 360
>gi|356557435|ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI-FFDKMISIYYNRGMHEKMFEIFA 183
+Y L + A G+L+ AEE+W + + +G + F+ M+S+Y G ++ +++
Sbjct: 315 SYMLAIEAFGRIGQLNRAEEIWLE--MKSTKGLKSVEQFNSMMSVYCKHGFIDRAAKLYK 372
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+M+ G +PN + K GM ++
Sbjct: 373 NMKASGCKPNAITYHQLALGCLKSGMAEQ 401
>gi|307105412|gb|EFN53661.1| hypothetical protein CHLNCDRAFT_58444 [Chlorella variabilis]
Length = 1131
Score = 40.8 bits (94), Expect = 0.83, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 84/183 (45%), Gaps = 11/183 (6%)
Query: 46 RKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEK-DW 104
R+RI ++++ + SN +E + A P T AL + ++ D
Sbjct: 389 RERIQPVTRTFNTLMIACNTSNQWQEALRVYEQMAA-SSHPPNTTTYNALISAHSKGGDL 447
Query: 105 KRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEG-TPRIF-F 162
+++ V K M+ KG R++ TY L++A + G A +L+ ++ EG P + +
Sbjct: 448 PKVLAVFKEMVQKGCERSVITYSSLISACEKAGEWKLALQLFEEM---RGEGCVPNVISY 504
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGM----LDKYEKLKK 218
+ +I+ EK E+F M+ G RP+V + + A+++ G L +E++ +
Sbjct: 505 NSLITACAQGAQWEKAAEVFEQMQRQGCRPDVVSYTALIQAYERGGQWRRALAAFEEMIR 564
Query: 219 KYP 221
P
Sbjct: 565 ARP 567
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 53/113 (46%), Gaps = 15/113 (13%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
T+ L+ A A GR+ +A L+ D + + + M++ Y G + +F+
Sbjct: 161 TFNTLITAHARAGRVADARSLF-----DEMPERNAVSWSAMVNGYVQAGDGREALGVFSQ 215
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRI 237
M+ GVRP+ +++ + A +LG L++ KW + Y+K +R+
Sbjct: 216 MQAQGVRPDDTVLVGVLAACAQLGALEQ----------GKWVHGYLKANNIRM 258
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 17/110 (15%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
++ A+ G++D A L+ K+ + I + MIS Y GMH++ ++F +M+
Sbjct: 216 VIKGYAKAGKMDIALTLFRKMVEKN-----AISWTTMISGYVQAGMHKEALQLFHEMQNS 270
Query: 189 GVRP-NVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRI 237
V P NVS+ + + +A +LG L++ KW + Y+ R+R+
Sbjct: 271 DVEPDNVSLANAL-SACAQLGALEQ----------GKWIHSYLTKTRIRM 309
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP-RIFFDKMIS 167
++ + M KG + +Y +++N L +G++ E E+ + + P R+ F+ +I+
Sbjct: 259 KLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEE--MSKRRYVPDRVTFNTLIN 316
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
Y N G + + A+M + G+ PNV + + N+ K G L++
Sbjct: 317 GYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNR 361
>gi|255661188|gb|ACU25763.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 426
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI ++ + + E+F M LG
Sbjct: 327 IHILAGAGRIEEATYVFRQA-IDAGEVKDITVFERMIHLFSKYKKYANLIEVFDKMRGLG 385
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL DK
Sbjct: 386 YFPDSNVIALVLNAYGKLHEFDK 408
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMI--SIYYNRGMHEKMFEIF 182
TY +L+N L DG++DEA L ++ LE P + ++ N+ ++E + +F
Sbjct: 265 TYNILINGLCSDGKVDEAVALRDQMVSSDLE--PNVVTHNVLINGFCKNKTVNEAI-NLF 321
Query: 183 ADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
DME+ GV PN + + +A+ K G ++
Sbjct: 322 NDMEKQGVDPNAMTYTTLIDAYCKDGRME 350
>gi|195604196|gb|ACG23928.1| hypothetical protein [Zea mays]
Length = 59
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRI 237
MEELGVRP+ +G AF G +K + + +KY KW+Y + G+RVR+
Sbjct: 1 MEELGVRPDEDTTRRIGKAFVASGQEEKEKHVLEKY-LKKWKYIHFNGERVRV 52
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
M+ G +++ TY +++ + ++G + A+ L+ + + + TP I ++ +I Y
Sbjct: 243 MVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQ--MKQMGLTPDIVTYNSLIDGYGKL 300
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
G+ ++ F +F +M+++G P+V + + N F KYE++ K +
Sbjct: 301 GLLDESFCLFEEMKDVGCEPDVITYNALINCFC------KYEQMPKAF 342
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T ++ L D ++ K M+S G + TY +LL+ L + G+L++A ++
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE- 489
Query: 149 IFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+L + P I+ ++ MI G E +++F + GV+PNV I + M + F +
Sbjct: 490 -YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
Query: 208 GM 209
G+
Sbjct: 549 GL 550
>gi|326488077|dbj|BAJ89877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T + L K I + ++S+G T TY LL+ L +DG +++AE L+ +
Sbjct: 140 VTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDE 199
Query: 149 IFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNV 194
+ E I ++ +++ Y G EK+ E+F M E G+ P++
Sbjct: 200 MLECGCEPNCAI-YNILLNGYRIAGDTEKVCELFESMVEQGMNPDI 244
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 7/139 (5%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFF 162
D +++ ++ + M+ +G + +Y ++++ L DGRL++ + ++ LE I +
Sbjct: 224 DTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLE-PDLITY 282
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPNV----SIVSMMGNAFQKLGMLDKYEK-LK 217
+ +I G E+ ++ DME+ G+ PN+ S++ +G A + YE+ L
Sbjct: 283 NLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLA 342
Query: 218 KKYPPPKWEYR-YIKGKRV 235
K + P + Y I+G V
Sbjct: 343 KGWKPNVFTYNALIRGYSV 361
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 107 IIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMI 166
++++ + M +KG T TY +++ L + LDEA L+ ++ + TP + ++
Sbjct: 123 MLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTP-CTYGPLL 181
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
G E +F +M E G PN +I +++ N ++ G
Sbjct: 182 DGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAG 223
>gi|15222950|ref|NP_172835.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174769|sp|Q9LMH5.1|PPR42_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g13800
gi|8778410|gb|AAF79418.1|AC068197_28 F16A14.3 [Arabidopsis thaliana]
gi|332190949|gb|AEE29070.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 883
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 74/186 (39%), Gaps = 9/186 (4%)
Query: 39 YPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTL 98
+ ++ K RKRI + S+ ++ C + N E Y F + + A L
Sbjct: 349 FNKMLKKRKRINCVIVSS-ILQCYCQMGNF-SEAYDLFKEFRETNISLDRVCYNVAFDAL 406
Query: 99 ENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP 158
+ I++ + M KG + Y L+ G+ +A +L + +D TP
Sbjct: 407 GKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIE--MDGTGKTP 464
Query: 159 RI-FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----Y 213
I ++ + G+ ++ FE ME GV+P +M+ G LDK Y
Sbjct: 465 DIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFY 524
Query: 214 EKLKKK 219
E L+ K
Sbjct: 525 ESLEHK 530
>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
Length = 820
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
L+N L G + A + KI L+H I + K+ISIY G +K F DM +
Sbjct: 580 LINDLCRVGNVQGASNV-CKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQR 638
Query: 189 GVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
G+ +V + +++ N + K G L + +L
Sbjct: 639 GLSVDVIVYTILMNGYCKAGRLQEACQL 666
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 42/198 (21%)
Query: 36 RPRYPRVWKARKRIGTISKSAKLVT-CIK-GLSNVKEEVYGALDSFIAWELEFPLITVKK 93
R YP V+KA ++G + A+L IK GL N D FI
Sbjct: 97 RLTYPSVFKAYAQLGLAHEGAQLHGRVIKLGLEN---------DQFIQ------------ 135
Query: 94 ALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDH 153
T+ N + + + G + T+ ++ LA+ G +D++ L+ K+ L +
Sbjct: 136 --NTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEIDKSRRLFDKMLLRN 193
Query: 154 LEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN-VSIVSMMGNAFQKLGMLDK 212
+ ++ MIS Y +G + E+F+ M+E G++P+ ++VS++ NA LG L +
Sbjct: 194 -----TVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLL-NACACLGALRQ 247
Query: 213 YEKLKKKYPPPKWEYRYI 230
E W + YI
Sbjct: 248 GE----------WIHDYI 255
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Query: 128 LLLNALAEDGRLDEA----EELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIF 182
L++ A + GRLD+A EE+ T F +P + ++ +I+ Y N+G+ ++
Sbjct: 243 LVICACCKLGRLDKANVVFEEMGTMGF------SPNVASYNTLIAGYCNKGLLSSAMKLR 296
Query: 183 ADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ ME+ GV P+V + + N F K+G L + KL
Sbjct: 297 SVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKL 330
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP-RIFFDKMIS 167
++ + M KG + +Y +++N L +G++ E E+ + + P R+ F+ +I+
Sbjct: 259 KLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEE--MSKRRYVPDRVTFNTLIN 316
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
Y N G + + A+M + G+ PNV + + N+ K G L++
Sbjct: 317 GYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNR 361
>gi|87162841|gb|ABD28636.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1053
Score = 40.4 bits (93), Expect = 0.90, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY L+ AL +G L +AE ++ K+ L+ + +++ + ++ G EK FE+ D
Sbjct: 769 TYATLIYALCREGYLQDAEHVFKKMVLNGFQPKTQVY-NSLLVATSKIGQLEKAFELLND 827
Query: 185 MEELGVR-PNVSIVSMMGNAFQK---LGMLDKYEKLKKKYPPPKW 225
ME+ ++ N ++ S++ QK G L+ Y K K K P +
Sbjct: 828 MEKQYIKFDNFTVSSVINCYCQKGDMEGALEFYYKFKGKDISPDF 872
Score = 38.1 bits (87), Expect = 5.8, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY +++A + GR++EA L+ ++ +E +F +I + G +++F++ +
Sbjct: 288 TYTAIMSAYCKKGRIEEAFGLFVRMKDMGIELDEFVFV-VLIDGFGRVGDFDRVFQLLVE 346
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
ME+ G+ PNV + + N K G + ++ K
Sbjct: 347 MEKRGIGPNVVTYNAVVNGLSKYGRTQEADEFSK 380
>gi|357449533|ref|XP_003595043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484091|gb|AES65294.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1070
Score = 40.4 bits (93), Expect = 0.90, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY L+ AL +G L +AE ++ K+ L+ + +++ + ++ G EK FE+ D
Sbjct: 786 TYATLIYALCREGYLQDAEHVFKKMVLNGFQPKTQVY-NSLLVATSKIGQLEKAFELLND 844
Query: 185 MEELGVR-PNVSIVSMMGNAFQK---LGMLDKYEKLKKKYPPPKW 225
ME+ ++ N ++ S++ QK G L+ Y K K K P +
Sbjct: 845 MEKQYIKFDNFTVSSVINCYCQKGDMEGALEFYYKFKGKDISPDF 889
Score = 38.1 bits (87), Expect = 5.8, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY +++A + GR++EA L+ ++ +E +F +I + G +++F++ +
Sbjct: 305 TYTAIMSAYCKKGRIEEAFGLFVRMKDMGIELDEFVFV-VLIDGFGRVGDFDRVFQLLVE 363
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
ME+ G+ PNV + + N K G + ++ K
Sbjct: 364 MEKRGIGPNVVTYNAVVNGLSKYGRTQEADEFSK 397
>gi|224121680|ref|XP_002330626.1| predicted protein [Populus trichocarpa]
gi|222872230|gb|EEF09361.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 71/158 (44%), Gaps = 34/158 (21%)
Query: 95 LKTLENEKDWKRIIQVTKWMLS-KGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDH 153
+K + + +Q+++WM +G ++ G + + L+ +++ L++AEE + I DH
Sbjct: 43 IKLFRRHRRFSHALQISQWMSDERGSEQSPGDFAVRLDLISKVHGLEQAEEYYNSI-PDH 101
Query: 154 LEGTP--------------------------------RIFFDKMISIYYNRGMHEKMFEI 181
L GT + ++ M+S+Y + G +EK+ +
Sbjct: 102 LRGTQVYGALLNCYAHKRRLEKAEATMQKMRELGLVQTLSYNVMLSLYSHMGRYEKLEAL 161
Query: 182 FADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+MEE GV ++ ++ +A+ +++ EKL K
Sbjct: 162 VKEMEEKGVNSDIYTFNIRLHAYVATSNIEEMEKLLMK 199
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T ++ L D ++ K M+S G + TY +LL+ L + G+L++A ++
Sbjct: 415 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE- 473
Query: 149 IFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+L + P I+ ++ MI G E +++F + GV+PNV I + M + F +
Sbjct: 474 -YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 532
Query: 208 GM 209
G+
Sbjct: 533 GL 534
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFF 162
D ++ + ML+ G YF+L++ L + GR+DEA EL+ ++ G + F
Sbjct: 139 DLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLG-DYVTF 197
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+I N G ++ E++ +M E G P + + + A K G +D+
Sbjct: 198 MTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDE 247
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMIS 167
+V K M + G + +Y +L++ GR+D+A E++ ++ + P I+ + +I
Sbjct: 301 EVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGI--LPNIYSYSILID 358
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL-----KKKYPP 222
+ G +K E+F +M+ G+ P+V S++ + F + G +D K + P
Sbjct: 359 GFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSP 418
Query: 223 PKWEY-RYIKG 232
+ Y IKG
Sbjct: 419 SAFNYCSLIKG 429
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 21/137 (15%)
Query: 96 KTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELW-----TKIF 150
K L +EK I++TK G + TY +L+N D ++D A L+ ++++
Sbjct: 537 KRLNSEKAVMLFIKMTKV----GITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVY 592
Query: 151 LDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML 210
D +I + +++ + N G + +F +M G PNV + N + KL
Sbjct: 593 PD------QIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKN 646
Query: 211 DK----YEKLKKK--YP 221
++ YEK+K++ YP
Sbjct: 647 NQAHKLYEKMKERGVYP 663
>gi|297816148|ref|XP_002875957.1| EMB1796 [Arabidopsis lyrata subsp. lyrata]
gi|297321795|gb|EFH52216.1| EMB1796 [Arabidopsis lyrata subsp. lyrata]
Length = 632
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 13/114 (11%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF------FDKMISIYYNRGMHEKM 178
Y +L AL+E+G+ DEA +L+ + +H PR F+ ++ Y G +E+
Sbjct: 315 AYNYVLEALSENGKFDEALKLFDAVKKEH--NPPRRLAVNLGTFNVVVDGYCAEGRYEEA 372
Query: 179 FEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL-----KKKYPPPKWEY 227
E+F M + P+ + + N G+L + EKL +KK P ++ Y
Sbjct: 373 MEVFRQMGDYRCSPDTLSFNNLMNQLCDNGLLAEAEKLYGEMEEKKVKPDEYTY 426
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 88 LITVKKALKTL-ENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELW 146
+IT L + +N K I+ +TK + KG + TY +L+N L + GRLD+A++++
Sbjct: 408 IITYNSILDAICKNNHVDKAIVLLTK-IKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVF 466
Query: 147 TKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQ 205
+ + +P I+ + +I+ + N+G ++ + + M++ G PN ++ ++
Sbjct: 467 EDLLVKGY--SPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLF 524
Query: 206 KLGMLDKYEKL 216
+ DK EKL
Sbjct: 525 EKDENDKAEKL 535
>gi|168063169|ref|XP_001783546.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664933|gb|EDQ51635.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 324
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 115 LSKGQGRT--MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNR 172
+ +G G T + ++ +LL A A GR D A +L+ +I + ++ +I+++
Sbjct: 69 MQQGAGITGNLASFNILLKAYAACGRADLAADLYFRIQQTGELNLDVVSYNAVINVFGRA 128
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
M EK + AD+ E GV PNV + + A G++++
Sbjct: 129 KMWEKALRVKADIIEAGVTPNVVTWTSIIEACATAGLVER 168
>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
Length = 726
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEG----TPRIFFDKMISIYYNRGMHEKMFE 180
TY +L++ LA+ G DEA E FL EG + + ++ + G + E
Sbjct: 305 TYNVLIHGLAKHGHADEALE-----FLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKE 359
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
I +M G +P+V S + + F ++G LD+ K+ K
Sbjct: 360 IVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMK 397
>gi|297792071|ref|XP_002863920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309755|gb|EFH40179.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 498
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
M+++G Y LL+A + GR D A L ++ H P + + +I +
Sbjct: 179 MINEGCVVNHEVYTALLSAYSRSGRFDAAFTLLERMKSSH-NCQPDVHTYSILIKSFLQV 237
Query: 173 GMHEKMFEIFADMEELGVRPN-VSIVSMMGNAFQKLG 208
+K+ ++ +DM LG+RPN ++ V M Q LG
Sbjct: 238 FAFDKVHDLLSDMRRLGIRPNTITFVEMESTLIQMLG 274
>gi|224160730|ref|XP_002338246.1| predicted protein [Populus trichocarpa]
gi|222871516|gb|EEF08647.1| predicted protein [Populus trichocarpa]
Length = 235
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP-RIFFDKMISIYYNR 172
M+ KG G + +Y +L+N + +DEA+ L + + E TP + + ++
Sbjct: 1 MVRKGCGPVVHSYNILINGYCQSRMMDEAKSLLAE--MSEKELTPDTVTYSTLMQGLCQV 58
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWE 226
G ++ +F +M G+ PN+ S++ + F K G LD+ KL + K E
Sbjct: 59 GRPQEALNLFKEMCSTGLLPNLVTYSILLDGFWKHGHLDEALKLLQSMQEKKLE 112
>gi|356569143|ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 658
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
+ LA GR++EA ++ + F D E F MI+++ + + E+F M +G
Sbjct: 488 IGILARAGRIEEATWVFRQAF-DAREVKDISVFGCMINLFSKNKKYGNVVEVFEKMRVVG 546
Query: 190 VRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
P+ +++++ NAF KL DK + L ++
Sbjct: 547 YFPDSDVIALVLNAFGKLREFDKADALYRQ 576
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 10/154 (6%)
Query: 84 LEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAE 143
LE + T + LK+ + + VTK M +K R Y +L++ A G + EA
Sbjct: 655 LEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAA 714
Query: 144 ELWTKIFLDHLEGT-PRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMG 201
+L ++ EG P I + ++ G +K EI +ME G++PN+ + +
Sbjct: 715 DLMQQM---RKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLI 771
Query: 202 NAFQKLGM----LDKYEKLK-KKYPPPKWEYRYI 230
N + + M L +E++K + P K Y +
Sbjct: 772 NGWARASMPEKALSCFEEMKLAELKPDKAAYHCL 805
>gi|356558306|ref|XP_003547448.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
mitochondrial-like [Glycine max]
Length = 1064
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI-FFDKMISIYYNRGMHEKMFEIFA 183
TY ++ AL +G L +AE +++K+ L + P++ ++ ++ G EK FE+
Sbjct: 782 TYATVIYALCREGFLLDAEHVFSKMVLKGFQ--PKVQVYNSLLDGISKFGQLEKAFELLN 839
Query: 184 DMEELGVRPNVSIVSMMGNAFQK----LGMLDKYEKLKKKYPPPKW 225
DME + P+ +S + N + + G L+ Y K K+K P +
Sbjct: 840 DMETKYIEPDSLTISAVINCYCQKGDMHGALEFYYKFKRKDMSPDF 885
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT--PRIFFDKMISIYYN 171
M+ KG G +Y +L++ ++ G ++++ K+ EG ++ + ++S Y
Sbjct: 256 MVEKGIGHDFVSYTVLVDGFSKLGDVEKSFTFLAKMIK---EGHRPNKVTYSAIMSAYCK 312
Query: 172 RGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+G E+ F +F M++LG+ + + ++ + F ++G DK
Sbjct: 313 KGKVEEAFGVFESMKDLGIDLDEYVFVILIDGFGRIGDFDK 353
>gi|297813013|ref|XP_002874390.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320227|gb|EFH50649.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1027
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 11/142 (7%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
IT+ + L N + +++ L K Y L+ A+ E G+L A E++ +
Sbjct: 729 ITISILVNALTNRGKHREAEHISRTCLEKNMALDTVGYNTLIKAMLEAGKLQCASEIYER 788
Query: 149 IFLDHLEGTPRIF--FDKMISIYYNRGMH-EKMFEIFADMEELGVRPNVSIVSMMGNAFQ 205
+ H G P ++ MIS+Y RG+ +K EIF++ G+ + I + M +
Sbjct: 789 M---HTSGVPCSIQTYNTMISVY-GRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYG 844
Query: 206 KLG----MLDKYEKLKKKYPPP 223
K G L + +++KK P
Sbjct: 845 KAGKMSEALSLFSEMQKKGIKP 866
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 27/187 (14%)
Query: 41 RVWKA------------RKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPL 88
RVW+A R +GT T + GL V+E + A + + +EF
Sbjct: 265 RVWEAVEIKNLLSYKGLRADVGTYC------TLVLGLCKVEE--FEAGEEMMNEMIEFGF 316
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSK----GQGRTMGTYFLLLNALAEDGRLDEAEE 144
+ + A+ L + K I +++K G ++ Y L+N++ +DG+LDEAE
Sbjct: 317 VPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAES 376
Query: 145 LWTKIFLDHLEGTPR-IFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNA 203
L+ + H P + + +I + RG + M E+G++ V S + +
Sbjct: 377 LFNN--MGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISG 434
Query: 204 FQKLGML 210
KLG L
Sbjct: 435 HCKLGKL 441
>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 726
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEG----TPRIFFDKMISIYYNRGMHEKMFE 180
TY +L++ LA+ G DEA E FL EG + + ++ + G + E
Sbjct: 305 TYNVLIHGLAKHGHADEALE-----FLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKE 359
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
I +M G +P+V S + + F ++G LD+ K+ K
Sbjct: 360 IVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMK 397
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR-IFFDKMISIYYNRGMHEKMFEIFA 183
+Y +L++ LA+ G+L++A +L+ K+ H TP + + +I + E+FA
Sbjct: 12 SYGILIDGLAKAGKLNDARDLFQKLL--HSGVTPSTVAYTSLIHGLCMANSFDDARELFA 69
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
DM G P+ +++ +A K GML++ L KK
Sbjct: 70 DMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKK 105
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168
++ M S G + Y +L L R ++AEEL ++F D+ + F+ ++
Sbjct: 316 EILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMF-DNDCPLDDVTFNILVDF 374
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+ G+ ++ E+ M E G P+V + + N F K G++D+ L K
Sbjct: 375 FCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKS 425
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 4/157 (2%)
Query: 52 ISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVT 111
I + L+ C L V + L + LE ++T L L E +++ +
Sbjct: 97 IHSLSILINCFCHLHRVDFGL-SVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLY 155
Query: 112 KWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYY 170
ML +G + TY +++N+L++ G+ +EA + ++ + P + + +I Y
Sbjct: 156 DDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQ--MEKVGCVPNVVNYSTLIDGYC 213
Query: 171 NRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
RG ++ +F M G PNV + + N + K+
Sbjct: 214 LRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKI 250
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T ++ L D ++ K M+S G + TY +LL+ L + G+L++A ++
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE- 489
Query: 149 IFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+L + P I+ ++ MI G E +++F + GV+PNV I + M + F +
Sbjct: 490 -YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
Query: 208 GM 209
G+
Sbjct: 549 GL 550
>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
Length = 381
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP-RIFFDKMISIYYNR 172
M S G + TY LL L + ++AEEL K + + P + F+ +IS +
Sbjct: 147 MQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIK--MSQNDCLPDNVTFNTIISFLCQK 204
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
G+ + FE+F M E G PN + S + K G +++
Sbjct: 205 GLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQ 244
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 5/125 (4%)
Query: 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL 129
EE G D + L +T + N+ D +R M+ KG ++ TY LL
Sbjct: 336 EEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLL 395
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGT--PRIFFDKMISIYYNRGMHEKMFEIFADMEE 187
++AL +GR+ EA+++ ++ +G I ++ +I+ Y G +K F++ +M
Sbjct: 396 VHALFMEGRMGEADDMIKEM---RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLS 452
Query: 188 LGVRP 192
G+ P
Sbjct: 453 KGIEP 457
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR-IFFDKMISIYYNRGMHEKMFEIFA 183
TY L++ + ++GRL+EA L+ K+ + P + ++ +I Y N+G E+ F
Sbjct: 321 TYGSLISGMCKEGRLEEASGLFDKMV--EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 378
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+M + G+ P+VS +++ +A G + + + + K+
Sbjct: 379 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKE 414
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR-IFFDKMISIYYNR 172
M+++G + +Y +L+N R+DEA++L+ ++ H TP + + +I +
Sbjct: 362 MITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMI--HQGLTPNTVSYTTLIHAFCQL 419
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
G + E+F DM G P++ S++ F K G L K +L
Sbjct: 420 GKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRL 463
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 74/187 (39%), Gaps = 23/187 (12%)
Query: 39 YPRVWKARKRIGTISKSAKLVTC----------IKGLSNVK--EEVYGALDSFIAWELEF 86
+ R R + +K VTC I GL V EE +G D +
Sbjct: 240 FCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQP 299
Query: 87 PLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELW 146
T +K L + + + M+ +G + TY +L++ L DG+++EA +
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359
Query: 147 TKIFLDHLEGTPRIF-----FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMG 201
K+ D RIF ++ +I+ Y G FE+ ME+ +PNV + +
Sbjct: 360 RKMVKD------RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELM 413
Query: 202 NAFQKLG 208
++G
Sbjct: 414 EGLCRVG 420
>gi|410110071|gb|AFV61115.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
macrostachya]
Length = 437
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E + F++MI ++ + + E+F M LG
Sbjct: 330 IHILAGAGRIEEATYVFRQA-IDAGEVKDIMVFERMIHLFSKYKKYANVVEVFDKMRGLG 388
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL DK
Sbjct: 389 YFPDSNVIALVLNAYGKLHEFDK 411
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY LL A A +G +D+ +E+ + G + ++ +I +Y RG H+ F++++D
Sbjct: 366 TYNSLLYAFAREGNVDKVKEICEDMVKMGF-GKDEMTYNTIIHMYGKRGQHDLAFQLYSD 424
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGML 210
M+ G P+ +++ ++ K M+
Sbjct: 425 MKLSGRSPDAVTYTVLIDSLGKANMI 450
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 123 MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIF 182
+ TY L++A + +++AEEL+ + + R F+ M+ ++ N G H K ++
Sbjct: 992 LDTYKSLISAFGKLQMVEQAEELFEGLLSKECK-LDRSFYHIMMKMFRNSGNHSKAEKLL 1050
Query: 183 ADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
M+E GV P ++ + ++ ++ G ++ EK+
Sbjct: 1051 GVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKV 1084
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
TY L++A + + L+EA +++ + + P ++ ++ MIS+Y GM + +F
Sbjct: 296 TYNTLISACSRESNLEEAVKVYNDMVAHRCQ--PDLWTYNAMISVYGRCGMSREAGRLFK 353
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
D+E G P+ + + AF + G +DK +++
Sbjct: 354 DLESKGFLPDAVTYNSLLYAFAREGNVDKVKEI 386
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 123 MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT----PRIFFDKMISIYYNRGMHEKM 178
+ TY L+ + + +++AEEL+ + L+ T R F+ M+ IY N G H K
Sbjct: 1025 LDTYKSLVASFGKQQLVEQAEELF-----EELQSTGCKLDRSFYHIMMKIYRNSGSHSKA 1079
Query: 179 FEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+F+ M++ GV P ++ + ++ ++ G + EK+
Sbjct: 1080 QRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKV 1117
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
TY L++A + L+EA ++ + H E P ++ ++ MIS+Y G+ K ++F
Sbjct: 330 TYNTLISACSRASNLEEAVNVFDDMVAHHCE--PDLWTYNAMISVYGRCGLSGKAEQLFN 387
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
D+E G P+ + AF + G ++K + +
Sbjct: 388 DLESRGFFPDAVSYNSFLYAFAREGNVEKVKDI 420
>gi|125537408|gb|EAY83896.1| hypothetical protein OsI_39118 [Oryza sativa Indica Group]
Length = 693
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEG----TPRIFFDKMISIYYNRGMHEKMFE 180
TY +L++ LA+ G DEA E FL EG + + ++ + G + E
Sbjct: 272 TYNVLIHGLAKHGHADEALE-----FLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKE 326
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
I +M G +P+V S + + F ++G LD+ K+ K
Sbjct: 327 IVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMK 364
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 5/125 (4%)
Query: 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL 129
EE G D + L +T + N+ D +R M+ KG ++ TY LL
Sbjct: 314 EEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLL 373
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGT--PRIFFDKMISIYYNRGMHEKMFEIFADMEE 187
++AL +GR+ EA+++ ++ +G I ++ +I+ Y G +K F++ +M
Sbjct: 374 VHALFMEGRMGEADDMIKEM---RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLS 430
Query: 188 LGVRP 192
G+ P
Sbjct: 431 KGIEP 435
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR-IFFDKMISIYYNRGMHEKMFEIFA 183
TY L++ + ++GRL+EA L+ K+ + P + ++ +I Y N+G E+ F
Sbjct: 299 TYGSLISGMCKEGRLEEASGLFDKMV--EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 356
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGML----DKYEKLKKKYPPP 223
+M + G+ P+VS +++ +A G + D ++++KK P
Sbjct: 357 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIP 400
>gi|449436321|ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
gi|449514880|ref|XP_004164505.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
Length = 477
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKI-FLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFA 183
TY L+NA + G L++ + + +I D + TP F+ +I++Y G KM E+F
Sbjct: 376 TYCSLVNAYGKSGDLEKVDSILRQIENSDVVPDTP--LFNCLINVYGQAGNVRKMGELFL 433
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+M+E P+ + M A + GM + ++L+ K
Sbjct: 434 EMKENKCVPDGITFATMIRALKAQGMTEDAQRLENK 469
>gi|357140426|ref|XP_003571769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Brachypodium distachyon]
Length = 637
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L+ L N I + M KG +G Y ++ +AL G+L + + T D +
Sbjct: 400 LEVLCNSGKTLEAIDLLHMMPEKGIDTDIGMYNMVFSAL---GKLKQVSFIST--LFDKM 454
Query: 155 EGT---PRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML 210
+ + P +F ++ MIS Y G+ +K +F +ME +P+V + + N K G L
Sbjct: 455 KASGIAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDL 514
Query: 211 DKYEKL-----KKKYPPPKWEY 227
D+ L +K Y P + Y
Sbjct: 515 DEAHILFKEMQEKGYDPDVFTY 536
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 106 RIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDK 164
+ ++V M S+G R++ +Y L+NA +GR + + EL ++ D + +P I ++
Sbjct: 159 KCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNDKI--SPSILTYNT 216
Query: 165 MISIYYNRGMH-EKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYE 214
+I+ G+ E + +FA+M G++P++ + + +A G+ D+ E
Sbjct: 217 VINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAE 267
>gi|240254086|ref|NP_173127.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806394|sp|Q3EDA9.2|PPR46_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g16830
gi|332191383|gb|AEE29504.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 608
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/126 (18%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMI 166
QV M+ G ++ + +L++ G +A +L+ K+ + +P + + +I
Sbjct: 232 FQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMI--QIGCSPNLVTYTSLI 289
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL-----KKKYP 221
+ + GM ++ F + + ++ G+ P++ + ++M + + +LG ++ K+ K+K
Sbjct: 290 KGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLV 349
Query: 222 PPKWEY 227
P ++ +
Sbjct: 350 PDQYTF 355
>gi|15234493|ref|NP_195386.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181418|sp|Q9M065.1|PP352_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g36680, mitochondrial; Flags: Precursor
gi|2464912|emb|CAB16807.1| salt-inducible like protein [Arabidopsis thaliana]
gi|7270616|emb|CAB80334.1| salt-inducible like protein [Arabidopsis thaliana]
gi|17381286|gb|AAL36061.1| C7A10_680/C7A10_680 [Arabidopsis thaliana]
gi|24111267|gb|AAN46757.1| At4g36680/C7A10_680 [Arabidopsis thaliana]
gi|332661286|gb|AEE86686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 412
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Query: 106 RIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKM 165
+ I++ + M KG T + +L++L + G L+ A+ LW ++ E + ++
Sbjct: 192 KAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI 251
Query: 166 ISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+S + E++ E+ +M +G++P+ + + A+ + GMLD+ +K+
Sbjct: 252 MSA--QKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKV 300
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 107 IIQVTKW---MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163
++ +W M KG TY ++N L L+EAE+L +++ L+ + +
Sbjct: 377 LVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLD-VDEVTYT 435
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+I Y RG + F++ M + GV PNV + + + K G
Sbjct: 436 VLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQG 480
>gi|255569680|ref|XP_002525805.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534892|gb|EEF36579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 182
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 126 YFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADM 185
Y ++++ + + G+L++A+EL++ + ++ L+ R + + +I ++ N G E+ +++F +M
Sbjct: 63 YNIIVDGMCKAGKLNDAKELFSTLPIEGLQPDVRTY-NILIKVFCNEGSLEEAYQVFREM 121
Query: 186 EELGVRPN 193
EE G P+
Sbjct: 122 EEGGSLPD 129
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY LL A A +G +D+ +E+ + G + ++ +I +Y RG H+ F++++D
Sbjct: 398 TYNSLLYAFAREGNVDKVKEICEDMVKMGF-GKDEMTYNTIIHMYGKRGQHDLAFQLYSD 456
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGML 210
M+ G P+ +++ ++ K M+
Sbjct: 457 MKLSGRSPDAVTYTVLIDSLGKANMI 482
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
TY L++A + + L+EA +++ + + P ++ ++ MIS+Y GM + +F
Sbjct: 328 TYNTLISACSRESNLEEAVKVYNDMVAHRCQ--PDLWTYNAMISVYGRCGMSREAGRLFK 385
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
D+E G P+ + + AF + G +DK +++
Sbjct: 386 DLESKGFLPDAVTYNSLLYAFAREGNVDKVKEI 418
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 123 MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIF 182
+ TY L++A + +++AEEL+ + + R F+ M+ ++ N G H K ++
Sbjct: 1024 LDTYKSLISAFGKLQMVEQAEELFEGLLSKECK-LDRSFYHIMMKMFRNSGNHSKAEKLL 1082
Query: 183 ADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
M+E GV P ++ + ++ ++ G ++ EK+
Sbjct: 1083 GVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKV 1116
>gi|226533322|ref|NP_001142217.1| uncharacterized protein LOC100274385 [Zea mays]
gi|194707648|gb|ACF87908.1| unknown [Zea mays]
gi|414870857|tpg|DAA49414.1| TPA: hypothetical protein ZEAMMB73_857299 [Zea mays]
Length = 472
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 119 QGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKM 178
Q R Y LL E +D+AEE + K + + T + M+ +Y G E++
Sbjct: 92 QLRKPQCYGSLLKCYVEAKAVDKAEEHFAK--MQEMGMTSSYAYTWMMKLYLQTGQLERV 149
Query: 179 FEIFADMEELGVRPNVSIVSMMGNAF------QKLG-MLDK---YEKL 216
+F DMEE GV+P+ V M A+ Q +G +LDK +EKL
Sbjct: 150 HAMFQDMEEKGVKPDTFSVEAMLAAYIAAEDVQGVGKVLDKANPHEKL 197
>gi|414868449|tpg|DAA47006.1| TPA: hypothetical protein ZEAMMB73_127498 [Zea mays]
Length = 870
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
TY L+N + GRLD L + + P + + +I IY GMH F ++
Sbjct: 457 TYNSLINGYGKQGRLDMVAFLVQDMRAQGV--APSVLTYSTLIDIYSKAGMHGDAFNVYL 514
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLD 211
D +E G++ +V + S + K G+++
Sbjct: 515 DFKESGLKADVVLFSSFIDTLAKNGLVE 542
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 27/187 (14%)
Query: 41 RVWKA------------RKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPL 88
RVW+A R +GT T + GL V+E + A + + +EF
Sbjct: 265 RVWEAVEIKNLLSYKGLRADVGTYC------TLVLGLCKVEE--FEAGEEMMNEMIEFGF 316
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSK----GQGRTMGTYFLLLNALAEDGRLDEAEE 144
+ + A+ L + K I +++K G ++ Y L+N++ +DG+LDEAE
Sbjct: 317 VPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAES 376
Query: 145 LWTKIFLDHLEGTPR-IFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNA 203
L+ + H P + + +I + RG + M E+G++ V S + +
Sbjct: 377 LFNN--MGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISG 434
Query: 204 FQKLGML 210
KLG L
Sbjct: 435 HCKLGKL 441
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
T+ L++ L + GR+D+A +++ K+ LD T I + +I ++N G E +I+ D
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKIYEKM-LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLK-KKYPPPKWEYRYIKGKRVRIP- 238
M P++ +++ + K G +K +E++K +++ P Y + ++
Sbjct: 508 MVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGF 567
Query: 239 AKPKYEL 245
A YEL
Sbjct: 568 ANETYEL 574
>gi|227462996|gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 532
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
R + T+ L+N + G ++ A EL+ D + + + MI+ Y + GM + E
Sbjct: 172 RDVITWTALINGYVKSGHVEFARELF-----DQMPERNEVSWSAMITGYVHMGMFREALE 226
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+F D++ G+RPN + + A LG LD
Sbjct: 227 LFNDLQLTGLRPNHAGIVGALTACSYLGSLDH 258
>gi|449440241|ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Cucumis sativus]
gi|449483740|ref|XP_004156675.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Cucumis sativus]
Length = 491
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
Y ++LN + DG A+EL+ ++ L L P I+ ++ I +G ++
Sbjct: 288 CYTMVLNGVIADGDYKMADELFDELLLFGL--VPDIYTYNVYIHGLCKQGDSVAGLQMIP 345
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
ME LG +PNV +++ + K G LD+ KL+ K
Sbjct: 346 HMEALGCQPNVITYNVILKSLCKTGELDEARKLRSK 381
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
R + ++ +L++ G EA EL++++ ++ +E I F ++S + G+ ++ +
Sbjct: 369 RDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPND-ITFTSILSACSHAGLIDEGRK 427
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYP 221
FADM +L VRP + + M + + G L++ +L KK P
Sbjct: 428 CFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIP 468
>gi|242086476|ref|XP_002443663.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
gi|241944356|gb|EES17501.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
Length = 853
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 15/134 (11%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
TY ++N L + G+L A +L+ ++ + TP + ++ MI++ +E + +++
Sbjct: 467 TYSAMVNCLGKGGQLAAAYKLFCEMIENGC--TPNLVTYNIMIALQAKARNYENVVKLYK 524
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKY 243
DM+ G RP+ S++ G LD+ E + +I+ +R P +P Y
Sbjct: 525 DMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAV------------FIEMRRDWAPDEPVY 572
Query: 244 ELDSATEGKTNEVE 257
L GK V+
Sbjct: 573 GLLVDLWGKAGNVD 586
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
L+T + ++++ ++++ K M G TY +++ L G LDEAE ++
Sbjct: 500 LVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFI 559
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
++ D P + ++ ++ G +K + M + G++PNV + + +AF K+
Sbjct: 560 EMRRDWAPDEP--VYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKM 617
>gi|2632061|emb|CAA05629.1| membrane-associated salt-inducible protein like [Arabidopsis
thaliana]
Length = 428
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Query: 106 RIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKM 165
+ I++ + M KG T + +L++L + G L+ A+ LW ++ E + ++
Sbjct: 208 KAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI 267
Query: 166 ISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+S + E++ E+ +M +G++P+ + + A+ + GMLD+ +K+
Sbjct: 268 MSA--QKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKV 316
>gi|168033663|ref|XP_001769334.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679440|gb|EDQ65888.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 384
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFL--LLNALAEDGRLDEAEEL 145
LI VK+ ++DWKR +++ +W+ S+ + T L +L L +L+ A++L
Sbjct: 205 LIVVKRV-----GDQDWKRAVEIYEWLNSR-KLYTPNPLLLATVLRILGRTNQLEIAQDL 258
Query: 146 WTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQ 205
++K L + R+ F+ ++ Y N+G + I M + G P+++ +++ A
Sbjct: 259 FSKTE-QELTSSIRV-FNAILGAYANQGKWQAAQPILECMVQRGCEPDIATFNLIAYARC 316
Query: 206 KLGM 209
K G+
Sbjct: 317 KDGL 320
>gi|255557995|ref|XP_002520026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540790|gb|EEF42350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1040
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 17/155 (10%)
Query: 59 VTCIKGLSNVKEE---VYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWM- 114
+ ++GL+ +EE V + F+ +L F + V L+ +K W+ WM
Sbjct: 125 IKTVRGLAGKREEERNVRLVMSGFVG-KLSFREMCV-----VLKEQKGWREARDFFYWMK 178
Query: 115 LSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT---PRIFFDKMISIYYN 171
L ++ Y ++L + G++ AE+ FL+ LE + M+ Y
Sbjct: 179 LQICYHPSVIVYTIVLRTYGQVGKIKLAEQ----TFLEMLEAGCEPDEVACGTMLCSYAR 234
Query: 172 RGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
G H+ MF ++ + E G+ +VS+ + M ++ QK
Sbjct: 235 WGRHKAMFSFYSAIRERGITLSVSVYNFMLSSLQK 269
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 94 ALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDH 153
L+ L NE K++ ++ M+ KG +Y +L+N + R+DEA+ L +++ H
Sbjct: 349 CLQRLMNEA--KKVFEI---MIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMY--H 401
Query: 154 LEGTP-RIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
P + + ++ G ++ +F +M G PN+ ++ + F K G LD+
Sbjct: 402 KALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDE 461
Query: 213 YEKLKKKYPPPKWE 226
KL K K E
Sbjct: 462 ALKLLKSMKEKKLE 475
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 105 KRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FD 163
K + + K M S G + TY +LL+ + G LDEA +L + LE P I +
Sbjct: 425 KEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLE--PNIVHYT 482
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+I + G E E+F+ + G RP++ ++M K G+ D+ L +K
Sbjct: 483 ILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRK 538
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
R + ++ +L++ G EA EL++++ ++ +E I F ++S + G+ ++ +
Sbjct: 400 RDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPND-ITFTSILSACSHAGLIDEGRK 458
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYP 221
FADM +L VRP + + M + + G L++ +L KK P
Sbjct: 459 CFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIP 499
>gi|414884871|tpg|DAA60885.1| TPA: hypothetical protein ZEAMMB73_800363 [Zea mays]
Length = 480
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 12/74 (16%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPR---IFFDKMISIYYNRGMHEKMFEIFADM 185
+L+A A GR+ +AE L+ G P + + M+S Y G HE+ F DM
Sbjct: 138 MLSAYARGGRVGDAERLFA--------GMPDRSVVSWTAMVSSYTQNGRHEEAVRTFLDM 189
Query: 186 -EELGVRPNVSIVS 198
+ GVRPN IVS
Sbjct: 190 WDGAGVRPNELIVS 203
>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFF 162
D + ++ M+ +G + TY L+N L D +L E L+ + + L RI +
Sbjct: 543 DLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGL-APDRILY 601
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
+I+ Y R + EIF +ME G+ + + + + F K+ +D
Sbjct: 602 TSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMD 650
>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 867
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 3/120 (2%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLE-GTPR 159
E D ++ + M G + T+ L+N + R+D A E+ ++ L+ P
Sbjct: 603 EGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPA 662
Query: 160 IFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+ +I + + + + +F+++ ELG+ PNVS+ + + + F+ LG +D L KK
Sbjct: 663 --YGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKK 720
>gi|410110065|gb|AFV61112.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
citrodora]
Length = 435
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI ++ + E+F M LG
Sbjct: 334 IHILAGAGRIEEATYVFRQA-IDAGEVKDITVFERMIHLFSKYKKYANAVEVFDKMRGLG 392
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL LDK
Sbjct: 393 YFPDSNVIALVLNAYGKLHELDK 415
>gi|212275714|ref|NP_001130387.1| uncharacterized protein LOC100191483 [Zea mays]
gi|194689000|gb|ACF78584.1| unknown [Zea mays]
gi|414865541|tpg|DAA44098.1| TPA: hypothetical protein ZEAMMB73_448674 [Zea mays]
Length = 691
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
Query: 112 KWMLSKGQGRTMGTYFLLLNALAEDGRL-DEAEELWTKIFLDHLEGTPRIFFDKMISIYY 170
+W L + R + ++ L RL E E LW ++ D ++ F +IS
Sbjct: 152 RWFLGNAKVRKKVILYNVVLKLLRKKRLWSETEALWAEMLRDGVQ-PDNATFSTVISCAR 210
Query: 171 NRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWE 226
G+H K E F M E G P++ S + +A+ G + +L + KW+
Sbjct: 211 ACGLHSKAVEWFDKMPEFGCSPDMLTYSAVIDAYGHAGNSEAALRLYDRARAEKWQ 266
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL 129
EE G D + L +T + N+ D +R M+ KG ++ TY LL
Sbjct: 260 EEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLL 319
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGT--PRIFFDKMISIYYNRGMHEKMFEIFADMEE 187
++AL +GR+ EA+++ ++ +G I ++ +I+ Y G ++ F++ +M
Sbjct: 320 VHALFMEGRMGEADDMIKEM---RKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLS 376
Query: 188 LGVRP-NVSIVSMM 200
G+ P +V+ S++
Sbjct: 377 KGIEPTHVTYTSLI 390
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR-IFFDKMISIYYNRGMHEKMFEIFA 183
TY L++ + ++GRL+EA L+ K+ + P + ++ +I Y N+G E+ F
Sbjct: 245 TYGSLISGMCKEGRLEEASGLFDKMV--EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 302
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+M + G+ P+VS +++ +A G + + + + K+
Sbjct: 303 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKE 338
>gi|242041975|ref|XP_002468382.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
gi|241922236|gb|EER95380.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
Length = 1026
Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168
QV +L G G +G LL+ A+ G++D + ++ + L L I ++ M+S
Sbjct: 160 QVHCRVLRTGHGSNVGVQTALLDMYAKAGQIDVSRRVFDCMVLRDL-----ISWNAMVSG 214
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVS----IVSMMGNA 203
Y G + E +M++ G+ PN S IV M G+A
Sbjct: 215 YSVNGCFREAVETLQEMQQCGMSPNASTLVGIVGMCGSA 253
>gi|356541064|ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 703
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M +G ++ TY LL+A G ++W + + +EGT R+ F+ ++ + G
Sbjct: 498 MQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRREKVEGT-RVTFNTLVDGFAKHG 556
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+++ ++ + +G+ P V +M+ NA+ + G K +L
Sbjct: 557 YYKEARDVISKFANVGLHPTVMTYNMLMNAYARGGRHSKLPEL 599
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Query: 118 GQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT-PRIF-FDKMISIYYNRGMH 175
G G + T +++NAL +DG++++ +++ +G P I ++ +IS Y ++G+
Sbjct: 220 GVGVNVYTLNIMVNALCKDGKMEKVGTFLSEV---QEKGVYPDIVTYNTLISAYSSQGLM 276
Query: 176 EKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
E+ FE+ M G P V + + N K G KYE+ K+ +
Sbjct: 277 EEAFELMHAMPSKGFSPGVYTYNTVINGLCKHG---KYERAKEVF 318
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY ++ L + GR+ EA++L+ ++ LE + + +I Y G ++ F +
Sbjct: 295 TYTAVICGLCQTGRVMEADKLFHEMVCKRLE-PDEVTYTALIDGYCKEGKMKEAFSLHNQ 353
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
M ++G+ PN+ + + + K G +D +L
Sbjct: 354 MLQMGLTPNIVTYTALADGLCKCGEVDTANEL 385
>gi|242032435|ref|XP_002463612.1| hypothetical protein SORBIDRAFT_01g002930 [Sorghum bicolor]
gi|241917466|gb|EER90610.1| hypothetical protein SORBIDRAFT_01g002930 [Sorghum bicolor]
Length = 638
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167
+ V + M + G T TY +LL+ GR D EL+ ++ T ++ +
Sbjct: 111 VAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRELFREMRTAVPPDTAT--YNVLFR 168
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNV 194
+Y + G +++ E+F DM E GV P++
Sbjct: 169 VYGDGGFFKEVVELFHDMLETGVEPDM 195
>gi|356547390|ref|XP_003542095.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
mitochondrial-like [Glycine max]
Length = 539
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 106 RIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKM 165
+ +++ + M S+G + TY +L +A + G ++EA+++ + H++ P + F +
Sbjct: 390 KAVEMMRLMESRGLRPDVYTYTVLASAYSNGGEMEEAQKILAEAKKKHVKLGP-VMFHTL 448
Query: 166 ISIYYNRGMHEKMFEIFADMEELGVRPNV 194
I Y ++ ++ A+M++ GVRP+V
Sbjct: 449 IRGYCKLEQFDEALKLLAEMKDYGVRPSV 477
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 24/150 (16%)
Query: 78 SFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDG 137
SF+ +L TVK AL+ LE+ + KR R + + ++ AL
Sbjct: 305 SFLVLKLCGEDETVKSALEILEDIPEEKR-------------ERAIKPFLAVVRALCRIK 351
Query: 138 RLDEAEELWTKIFLDHLEGTP---RIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNV 194
+D+A+EL K+ +E P F+ +++ Y G K E+ ME G+RP+V
Sbjct: 352 EVDKAKELLLKM----IENGPPPGNAVFNFVVTAYSKAGEMGKAVEMMRLMESRGLRPDV 407
Query: 195 SIVSMMGNAFQKLGMLDKYEKL----KKKY 220
+++ +A+ G +++ +K+ KKK+
Sbjct: 408 YTYTVLASAYSNGGEMEEAQKILAEAKKKH 437
>gi|357490167|ref|XP_003615371.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355516706|gb|AES98329.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 765
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 22/134 (16%)
Query: 104 WKRIIQVTKWMLSKGQG-----RTMGTYFL--------LLNALAEDGRLDEAEELWTKIF 150
+ ++ V M++ QG RT+ T FL ++N + G ++ A +K+F
Sbjct: 394 FSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSIERA----SKVF 449
Query: 151 LDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN----VSIVSMMGNAFQK 206
L+ + I + MI+ + G ++ +F DM+ +G+RPN V ++S G+A
Sbjct: 450 LE-MSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSACGSAGMV 508
Query: 207 LGMLDKYEKLKKKY 220
+ +E ++K+Y
Sbjct: 509 NEAFNYFEIMQKEY 522
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 7/148 (4%)
Query: 61 CIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQG 120
C G N+ E+ ++ L L+T L L +W++ ++ + M +
Sbjct: 181 CKNGDVNIALELLNEMEK--KGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRIN 238
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS--IYYNRGMHEKM 178
+ T+ L++A + G LDEA+EL+ ++ + G + ++ +I+ + R H K
Sbjct: 239 PDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSI-GPNTVTYNSLINGLCMHGRLYHAK- 296
Query: 179 FEIFADMEELGVRPNVSIVSMMGNAFQK 206
+ F M G PNV + + N F K
Sbjct: 297 -KTFDLMASKGCFPNVVTYNTLINGFCK 323
>gi|218192883|gb|EEC75310.1| hypothetical protein OsI_11678 [Oryza sativa Indica Group]
Length = 473
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%)
Query: 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL 129
+E G + + +E +IT ++ L IQV + +LS G ++ T+ L
Sbjct: 377 DEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVSTFTPL 436
Query: 130 LNALAEDGRLDEAEELWTKIFLDH 153
++ + E+G++D A EL F+ H
Sbjct: 437 IDTMCEEGQVDAAVELLKPFFIAH 460
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163
+ +I +TK M G + T +L+N + R+D A + KI L+ T + F
Sbjct: 114 YDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTI-VTFT 172
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+I+ G + E+F DM G RP+V + + N K+G
Sbjct: 173 TLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIG 217
>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
Length = 662
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
KTL K K +V + ML+KG TY +++ +D +++EA +L H
Sbjct: 246 FKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKL-------HG 298
Query: 155 EGTPRIF------FDKMISIYYNRGMHEKMFEIFADMEELGVRPNV 194
+ T R F F+ ++ Y N G E+ F + M+ G++P++
Sbjct: 299 DMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDI 344
>gi|115529199|dbj|BAF34332.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 395
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFL--LLNALAEDGRLDEAEEL 145
LI VK+ ++DWKR +++ +W+ S+ + T L +L L +L+ A++L
Sbjct: 216 LIVVKRV-----GDQDWKRAVEIYEWLNSR-KLYTPNPLLLATVLRILGRTNQLEIAQDL 269
Query: 146 WTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQ 205
++K L + R+ F+ ++ Y N+G + I M + G P+++ +++ A
Sbjct: 270 FSKTE-QELTSSIRV-FNAILGAYANQGKWQAAQPILECMVQRGCEPDIATFNLIAYARC 327
Query: 206 KLGM 209
K G+
Sbjct: 328 KDGL 331
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 5/131 (3%)
Query: 97 TLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEG 156
L N+ D + +V M+ KG + +Y +L+N + RLDEA+ L + + E
Sbjct: 348 CLNNQMDEAQ--KVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVE--MSEKEL 403
Query: 157 TP-RIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEK 215
TP + + ++ G ++ +F +M G+ P++ S + + K G LD+ K
Sbjct: 404 TPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALK 463
Query: 216 LKKKYPPPKWE 226
L K K E
Sbjct: 464 LLKSMQESKIE 474
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 126 YFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADM 185
Y +L+ + G+L+ A+EL++K+F D ++ T R + MI G+ ++ +E+F M
Sbjct: 480 YNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRT-YTIMIKGLLKEGLSDEAYELFRKM 538
Query: 186 EELGVRPN 193
E+ G PN
Sbjct: 539 EDDGFLPN 546
>gi|413951888|gb|AFW84537.1| hypothetical protein ZEAMMB73_783984 [Zea mays]
Length = 238
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 1/129 (0%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
+IT + L + ++ +TK ML +G + TY L+ L ++D A +W
Sbjct: 45 IITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYGSLIRGLCRVKKIDAALCIWN 104
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+I LD I + +I + G F I+ +M+E PN+ + + + F ++
Sbjct: 105 EI-LDAGIQVDVIVHNILIHGLCSAGKVNDAFCIYLEMKEKNCSPNLVTYNTLMDGFYEI 163
Query: 208 GMLDKYEKL 216
G +D L
Sbjct: 164 GSIDTAASL 172
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Query: 75 ALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALA 134
D+ W L +++ + D ++ M + G + TY +L+N L
Sbjct: 158 VFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLC 217
Query: 135 EDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNV 194
++ ++DEA EL+ ++ LD + F +I ++ GM + EI+ M G P++
Sbjct: 218 KESKVDEANELFNEM-LDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDL 276
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163
WK ++ + M G TY L++ G EA +++ ++ E ++ F+
Sbjct: 237 WKEVVVLVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFE-PDKVTFN 295
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
++ +Y HE+ + ME G P+V + + +A+ K G+L++ +LK++
Sbjct: 296 SLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQE 351
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 34/133 (25%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI----- 149
L L +K +R I+ M+S+G + TY LL AL +DG++D A E+ ++
Sbjct: 394 LHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGC 453
Query: 150 -------------------------FLDHLEG---TPRIF-FDKMISIYYNRGMHEKMFE 180
LD ++G P I + ++ G ++
Sbjct: 454 SPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIA 513
Query: 181 IFADMEELGVRPN 193
F D+EE+GV+PN
Sbjct: 514 FFHDLEEMGVKPN 526
>gi|242092154|ref|XP_002436567.1| hypothetical protein SORBIDRAFT_10g004910 [Sorghum bicolor]
gi|241914790|gb|EER87934.1| hypothetical protein SORBIDRAFT_10g004910 [Sorghum bicolor]
Length = 492
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD-KMISIYYNR 172
M+ +G + +Y L++A + GR EA L LD ++ TP D K SI
Sbjct: 167 MIDEGCAPNLESYTALVSAYSRSGRFHEAFNL-----LDRMKDTPGCQPDVKTYSILIKS 221
Query: 173 GMH----EKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
+H EK+ + DM G+RPN + + +A+ K
Sbjct: 222 CLHAYDFEKVKSLLTDMARAGIRPNTVTYNTLIDAYGK 259
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168
++ M S G + Y +L L R EAEEL +++F + F+ ++
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP-LDDVTFNILVDF 365
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
+ G+ +++ E+ M G P+V + + N F K G++D+ L K
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 415
>gi|115463453|ref|NP_001055326.1| Os05g0365500 [Oryza sativa Japonica Group]
gi|46063434|gb|AAS79737.1| putative pentatricopeptide (PPR) repeat-containing protein, PF01535
[Oryza sativa Japonica Group]
gi|54287606|gb|AAV31350.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|54291873|gb|AAV32241.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|113578877|dbj|BAF17240.1| Os05g0365500 [Oryza sativa Japonica Group]
Length = 911
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI---FFDKMISIYYNRGMHEKMFEI 181
TY L+++ + GR+D+ + + K+ D E P+ FF++M G + ++
Sbjct: 437 TYTYLVDSCFKVGRVDDTIQYFYKM-ADGREHGPKFNIGFFNRMFEGLTEAGRMDDALKV 495
Query: 182 FADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKY------PPPKW 225
+ M + ++PN + + NA K G LDK +L PPP++
Sbjct: 496 YGRMPDKEIKPNTTTFETLVNALCKEGDLDKARELVSDMAKGGVTPPPEF 545
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
ML +GQ + TY L++AL ++G LD A L+ K+ + P ++ F ++
Sbjct: 399 MLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIR--PNVYTFTILLDGLCKV 456
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
G + E F D+ G NV ++M N K G+LD+ L+ +
Sbjct: 457 GRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSR 503
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 68 VKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYF 127
V E G L+ +A++ E L++V A + + K K V +++ KG R
Sbjct: 204 VVEMFKGMLEVGVAFD-EITLVSVVTACGRIGDAKLGK---WVAEYVDEKGLVRNRNLMT 259
Query: 128 LLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEE 187
L++ A+ G L +A L+ D ++ + + MIS Y + +F++M+
Sbjct: 260 ALIDMYAKCGELGKARRLF-----DGMQSRDVVAWSAMISGYTQADQCREALALFSEMQL 314
Query: 188 LGVRPN-VSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRI 237
V PN V++VS++ +A LG L+ KW + YI+ KR+ +
Sbjct: 315 AEVEPNDVTMVSVL-SACAVLGALET----------GKWVHSYIRRKRLSL 354
>gi|224124604|ref|XP_002319373.1| predicted protein [Populus trichocarpa]
gi|222857749|gb|EEE95296.1| predicted protein [Populus trichocarpa]
Length = 810
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFF-DKMISIYYNRGMHEKMFEIFADMEE 187
L+ ++ G D A+ L+ K + LEG P I + MIS+Y + GM + +F ++ E
Sbjct: 488 LIKVYSKLGCFDGAKHLYKK--MKDLEGGPDIIASNSMISLYADLGMISEAELVFKNLRE 545
Query: 188 LGVRPNVSIVSMMGNAFQKLGMLDK 212
G VS +MM ++ +GMLD+
Sbjct: 546 NGQADGVSFATMM-YLYKSMGMLDE 569
>gi|299469655|emb|CBN76509.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 787
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 5/143 (3%)
Query: 83 ELEFP--LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLD 140
EL P +I+ A+ WK+ +++ + M S G TY + A G+ +
Sbjct: 559 ELSVPPNVISYTAAIAACGKGDQWKQALELLREMASMGVSPNDRTYTAAITACGNSGKWE 618
Query: 141 EAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSM 199
EA L + + + P I + I N G E+ E+F ++ G+ +V +
Sbjct: 619 EALSLLRE--MPTMGADPNIASYTATIKACGNGGQWERAVELFRELPSAGITADVQAYNA 676
Query: 200 MGNAFQKLGMLDKYEKLKKKYPP 222
A G +D+ +L ++ P
Sbjct: 677 CVQACGNSGAVDQAVELLREMAP 699
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMI 166
I + +LSK G + + L+N +GRL+EA +++ P +F F ++
Sbjct: 331 IDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINN-GYVPDVFTFSTLV 389
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ +G+ E+ DM+ G +PN++ +++ + F K G L++
Sbjct: 390 NGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEE 435
>gi|218191264|gb|EEC73691.1| hypothetical protein OsI_08267 [Oryza sativa Indica Group]
Length = 751
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
L+N L G + A + KI L+H I + K+ISIY G +K F DM +
Sbjct: 511 LINDLCRVGNVQGASNV-CKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQR 569
Query: 189 GVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
G+ +V + +++ N + K G L + +L
Sbjct: 570 GLSIDVIVYTILMNGYCKAGRLQEACQL 597
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
T+ L+ L + ++ +A L+ K+ +++ + + +++ +G +K F++
Sbjct: 144 TFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRL 203
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL-----KKKYPPPKWEY 227
ME+ +PN +++ +AF K GMLD L +K PP + Y
Sbjct: 204 MEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTY 251
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 17/169 (10%)
Query: 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL 129
+EV + +EF +T+ L + + + ++++SKG R L
Sbjct: 204 DEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSL 263
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ A+ G++D A +L+ D ++ + + MIS Y ++ +F +M++
Sbjct: 264 IDMYAKCGQVDTARKLF-----DEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGN 318
Query: 190 VRPN-VSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRI 237
V PN V++VS++ + ML YE KW + YIK K++++
Sbjct: 319 VYPNEVTMVSVLYSC----AMLGAYE-------TGKWVHFYIKKKKMKL 356
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168
++ M S G + Y +L L R EAEEL +++F + F+ ++
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP-LDDVTFNILVDF 365
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+ G+ +++ E+ M G P+V + + N F K G++D+ L K
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416
>gi|449445824|ref|XP_004140672.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Cucumis sativus]
gi|449487417|ref|XP_004157616.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Cucumis sativus]
Length = 486
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
Y +L+N + GR D+A ++++ D ++ P ++ F+ +IS Y + E+F
Sbjct: 186 VYNILINGFVKSGRFDKALGFYSRMLSDRVK--PDVYTFNILISGYCRNSQFVQALELFK 243
Query: 184 DMEELGVRPNV 194
+M E G PNV
Sbjct: 244 EMREKGCSPNV 254
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168
+V K M G + TY ++++AL G++ A +++ + LD I F+ ++ +
Sbjct: 276 KVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADM-LDSGCAPNAITFNNLMRV 334
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWE-- 226
+ G EK+ +++ M++LG P+ + + A + L+ K+ K E
Sbjct: 335 HVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVN 394
Query: 227 -------YRYIKGKR 234
+RYI+ KR
Sbjct: 395 ASTFNTIFRYIEKKR 409
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 126 YFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFAD 184
Y +++ L + GRLD+A + ++ D L +P I F+ +I + G EK E+F +
Sbjct: 465 YTTVIDGLCKIGRLDDAMSRFCQMIDDGL--SPDIITFNTLIHGFALHGKWEKAEELFYE 522
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYP 221
M + G+ PNV+ + M + K G + + KL P
Sbjct: 523 MMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMP 559
>gi|255557939|ref|XP_002519998.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540762|gb|EEF42322.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 66/140 (47%), Gaps = 8/140 (5%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
L+T+ + L + W I + M S G ++ Y +L++ + GR +AEE +
Sbjct: 269 LVTI---ISRLAEQGKWNIIRENFDIMKSWGYKKSGAIYAILVDIYGQYGRFQDAEECIS 325
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+ + + + +F + + Y +G+ E+ ++ ME G+ PN+ +++++ NAF
Sbjct: 326 ALKSEGILPSASMFC-VLANAYAQQGLCEQTVKVLQLMEAEGIEPNLIMLNVLINAFGIA 384
Query: 208 G----MLDKYEKLKKKYPPP 223
G L Y +K+ P
Sbjct: 385 GRHREALSIYHHMKESGISP 404
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T + L + ++ I + ++S+G T TY LL+ L + GR+++AE L+ +
Sbjct: 861 VTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 920
Query: 149 IFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNV 194
+ + I ++ +++ + G EK+ +F DM + G+ P++
Sbjct: 921 MLEYGCKANCTI-YNILLNGHRIAGNTEKVCHLFQDMVDQGINPDI 965
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 90/216 (41%), Gaps = 34/216 (15%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDH------- 153
E D ++ IQ+ M+ KG + TY +L+N L + R EA+ L K+F +
Sbjct: 533 EGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVT 592
Query: 154 ----LEGTPRIFFDKMISI---YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
+E I F ++S+ + +GM + ++F M E +P+ + ++M + +
Sbjct: 593 YHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCR 652
Query: 207 LGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSATEGKTNEVETTKNPNESS 266
G + K L K+ + + V K ++ EGK NE+ +
Sbjct: 653 GGDIRKAYSLYKEMVKSGFLLHTVT---VIALVKTLHK-----EGKVNELNS-------- 696
Query: 267 EEPEAAANLNESLEETEANTKELLEEADAISNESDI 302
AN+ S E +EA ++L E + D+
Sbjct: 697 ----VIANVLRSCELSEAEQAKVLVEINHREGNMDV 728
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Query: 74 GALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNAL 133
G + +A +IT + + + ++ + M+S+G TY LL+ L
Sbjct: 538 GVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGL 597
Query: 134 AEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN 193
++ + DEA EL+ K+ ++ R+ + ++ + N G E+ E+F +M G P+
Sbjct: 598 CKESKPDEAHELFRKM-VERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPD 656
Query: 194 VSIVSMMGNAFQKLG 208
V + + F + G
Sbjct: 657 VVAYNCLLKGFFRAG 671
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 12/115 (10%)
Query: 87 PLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELW 146
P ++ L+TL+ + + + +W+ +KG +YFL++ L L+ A
Sbjct: 91 PSLSKTTVLQTLQLIRTPAKALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARN-- 148
Query: 147 TKIFLDHLE----GTPRI---FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNV 194
F+ +E G ++ FF+ +I Y G+ ++ ++F M+E+GV P+V
Sbjct: 149 ---FVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSV 200
>gi|195616496|gb|ACG30078.1| PPR2 [Zea mays]
Length = 580
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 11/192 (5%)
Query: 29 VCAARGPRPRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPL 88
V AA P P+ R WKA + G + T L NVK+ + D+ AW
Sbjct: 139 VRAAPAP-PQGKRHWKAGEFPGAAAAPGS-GTPRTPLKNVKKRLDARADA-KAWA----- 190
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKG-QGRTMGTYFLLLNALAEDGRLDEAEELWT 147
TV +AL + K+W+ +QV + + + GTY L+ L G+ A +L+
Sbjct: 191 CTVTEALADRVSSKNWQEALQVFEMLKEQPFYHPKEGTYMKLIVLLGRSGQPTRAHQLFD 250
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGV-RPNVSIVSMMGNAFQK 206
++ + TP + + +I Y G+ ++ ++ DM+ + +P+V S + A
Sbjct: 251 EMLQQGCQPTPEL-YTALIGAYCRSGLLDEALQLLNDMKSSPLCQPDVYTYSTIIKACVD 309
Query: 207 LGMLDKYEKLKK 218
D + + K
Sbjct: 310 AARFDLTDAMYK 321
>gi|413944457|gb|AFW77106.1| hypothetical protein ZEAMMB73_510937 [Zea mays]
Length = 492
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 15/127 (11%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD-KMIS 167
Q+ + M+ +G + +Y L++ + GR EA +L LD ++ TP D + S
Sbjct: 162 QLFQAMIDEGCAPNLQSYTALVSTYSRSGRFREAFDL-----LDRMKDTPGCQPDVQTYS 216
Query: 168 IYYNRGMH----EKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEK-----LKK 218
I +H EK+ + ADM G+ PN + + +A+ K G + E L +
Sbjct: 217 ILIKSCLHAYDFEKVKSLLADMARAGIPPNTVTYNTLIDAYGKAGRFAEMESTLLKMLSQ 276
Query: 219 KYPPPKW 225
P W
Sbjct: 277 NCKPDVW 283
>gi|410110059|gb|AFV61109.1| pentatricopeptide repeat-containing protein 123, partial
[Acantholippia salsoloides]
Length = 433
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI ++ + + E+F M LG
Sbjct: 330 IHILAGAGRIEEATYVFRRA-IDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMRGLG 388
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL DK
Sbjct: 389 YFPDSNVIALVLNAYGKLHEFDK 411
>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 917
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 132 ALAEDGRLDEAEELWTKIFLDHLEGTP--RIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
L GR DEA +L + +G P + F+ +I+ Y N G+ E+ F + M + G
Sbjct: 472 GLCWAGRYDEAMKLLENLLG---KGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFG 528
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK-----YEKLKKKYPPPKWEYRYIKGKRVRIPA 239
+ P+ S S + + + G LD+ Y+ + K +P + + RI A
Sbjct: 529 LTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGA 583
>gi|440577310|emb|CCI55317.1| PH01B001I13.13 [Phyllostachys edulis]
Length = 636
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 1/122 (0%)
Query: 85 EFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEE 144
E L T TL E ++ + M + G Y + +LA+ AE+
Sbjct: 253 ESCLETYTIVCDTLGREGRALDALKCLREMEADGISPNATIYSSAIGSLADARETAAAED 312
Query: 145 LWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
L+ + + G P +F K+I ++ G+ EK + DM E+G+R I+S + N F
Sbjct: 313 LYHEARKKEMLGDPDMFL-KVIVMHVETGLVEKTLGVAKDMREIGLRVTDCILSTIVNGF 371
Query: 205 QK 206
K
Sbjct: 372 VK 373
>gi|410110073|gb|AFV61116.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
virgata]
Length = 424
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI ++ + + E+F M LG
Sbjct: 334 IHILAGAGRIEEATYVFRQA-IDAGEVKDITVFERMIHLFSKYKKYANVIEVFDKMRGLG 392
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL DK
Sbjct: 393 YFPDSNVIALVLNAYGKLHEFDK 415
>gi|255661186|gb|ACU25762.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 426
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI ++ + + E+F M LG
Sbjct: 327 IHILAGAGRIEEATYVFRQA-IDAGEVRDITVFERMIHLFSKYKKYANVVEVFDKMRGLG 385
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL DK
Sbjct: 386 YFPDSNVIALVLNAYGKLHEFDK 408
>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g19290-like [Cucumis
sativus]
Length = 885
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 132 ALAEDGRLDEAEELWTKIFLDHL--EGTP--RIFFDKMISIYYNRGMHEKMFEIFADMEE 187
L GR DEA +L L++L +G P + F+ +I+ Y N G+ E+ F + M +
Sbjct: 441 GLCWAGRYDEAMKL-----LENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVK 495
Query: 188 LGVRPNVSIVSMMGNAFQKLGMLDK-----YEKLKKKYPPPKWEYRYIKGKRVRIPA 239
G+ P+ S S + + + G LD+ Y+ + K +P + + RI A
Sbjct: 496 FGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGA 552
>gi|410110069|gb|AFV61114.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
lycioides]
Length = 429
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI ++ + + E+F M LG
Sbjct: 329 IHILAGAGRIEEATYVFRQA-IDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMRGLG 387
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL DK
Sbjct: 388 YFPDSNVIALVLNAYGKLHEFDK 410
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168
++ M S G + Y +L L R EAEEL +++F + F+ ++
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP-LDDVTFNILVDF 365
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
+ G+ +++ E+ M G P+V + + N F K G++D+ L K
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 415
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 98 LENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT 157
L D +++ + M +G T+ L+N +D ++DEA L+ K+ +D
Sbjct: 453 LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM-IDSNVIP 511
Query: 158 PRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN 193
+ F+ MI Y G K F+++ M E+G++P+
Sbjct: 512 NEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPD 547
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168
++ M S G + Y +L L R EAEEL +++F + F+ ++
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP-LDDVTFNILVDF 365
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
+ G+ +++ E+ M G P+V + + N F K G++D+ L K
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 415
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M +KG + TY +LL+ A +G + + + D + +F +I Y RG
Sbjct: 247 MAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVF-TILIDAYAKRG 305
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML----DKYEKL 216
M ++ I ++M+ G+ P+V S + +A ++G L DK+ ++
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQM 352
>gi|195613552|gb|ACG28606.1| tetratricopeptide-like helical [Zea mays]
gi|414870858|tpg|DAA49415.1| TPA: tetratricopeptide-like helical [Zea mays]
Length = 517
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 119 QGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKM 178
Q R Y LL E +D+AEE + K + + T + M+ +Y G E++
Sbjct: 137 QLRKPQCYGSLLKCYVEAKAVDKAEEHFAK--MQEMGMTSSYAYTWMMKLYLQTGQLERV 194
Query: 179 FEIFADMEELGVRPNVSIVSMMGNAF------QKLG-MLDK---YEKL 216
+F DMEE GV+P+ V M A+ Q +G +LDK +EKL
Sbjct: 195 HAMFQDMEEKGVKPDTFSVEAMLAAYIAAEDVQGVGKVLDKANPHEKL 242
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY ++ L + GR+ EA++L+ ++ LE + + +I Y G ++ F +
Sbjct: 395 TYTAVICGLCQTGRVMEADKLFHEMVCKRLE-PDEVTYTALIDGYCKEGKMKEAFSLHNQ 453
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
M ++G+ PN+ + + + K G +D +L
Sbjct: 454 MLQMGLTPNIVTYTALADGLCKCGEVDTANEL 485
>gi|357444885|ref|XP_003592720.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481768|gb|AES62971.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 553
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP----RIFFDKMISIYYNRGMHEKMFE 180
TY ++L + + EAEE++ K+ D E +P + F+ MI +Y G HEK +
Sbjct: 212 TYQIILKTFVQGNKFKEAEEVFDKLLND--EKSPLRPDQKMFNMMIYMYKKSGSHEKARQ 269
Query: 181 IFADMEELGV-RPNVSIVSMM 200
FA M E G+ + V+ S+M
Sbjct: 270 TFALMAERGIKKATVTYNSLM 290
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 21/189 (11%)
Query: 48 RIGTISKSAKLVTCIKGLSNVKEEVYG---ALDSFIAWE----------------LEFPL 88
++G ++K+A+++ +K N+K + YG LD F E + F +
Sbjct: 408 KLGHVNKAAEVLVSMKDW-NLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTV 466
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T LK L + + + + M +G TY LL+A + G D A +W
Sbjct: 467 VTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKD 526
Query: 149 IFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+ ++ + MI + + EIF M+ELG P+ + + + K+G
Sbjct: 527 ALSKGFTKSITLY-NTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVG 585
Query: 209 MLDKYEKLK 217
L + KLK
Sbjct: 586 NLVEALKLK 594
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 8/144 (5%)
Query: 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI 149
T + L E K+ M + G + TY +++ GR++ A+ + T +
Sbjct: 223 TFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM 282
Query: 150 FLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+E P F + +IS +G E+ +IF +M + G+RP+ I + + + F G
Sbjct: 283 KRQKIE--PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKG 340
Query: 209 MLD-----KYEKLKKKYPPPKWEY 227
LD K E LKK P Y
Sbjct: 341 NLDMASAYKDEMLKKGISPTMSTY 364
>gi|428179291|gb|EKX48163.1| hypothetical protein GUITHDRAFT_86178 [Guillardia theta CCMP2712]
Length = 557
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
+++ A G +DEA+ + K+ D + F +I + N G +K E+ MEEL
Sbjct: 253 MMSGYAAKGMVDEAQGI-MKLLQDMRIKANAMTFSSLIEAFINAGYADKAVEVKRKMEEL 311
Query: 189 GVRPNVSIVSMMGNAFQKLG----MLDKYEKLKKKYPPP 223
GV ++ + + M A+ +G ++K E++ K+ P
Sbjct: 312 GVEVDMVVSTQMLKAYTSMGKVEEAIEKLEEIVKEASSP 350
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 8/144 (5%)
Query: 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI 149
T + L E K+ M + G + TY +++ GR++ A+ + T +
Sbjct: 223 TFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM 282
Query: 150 FLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+E P F + +IS +G E+ +IF +M + G+RP+ I + + + F G
Sbjct: 283 KRQKIE--PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKG 340
Query: 209 MLD-----KYEKLKKKYPPPKWEY 227
LD K E LKK P Y
Sbjct: 341 NLDMASAYKDEMLKKGISPTMSTY 364
>gi|15228825|ref|NP_188906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274241|sp|Q9LUJ4.1|PP248_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22670, mitochondrial; Flags: Precursor
gi|9279685|dbj|BAB01242.1| unnamed protein product [Arabidopsis thaliana]
gi|332643142|gb|AEE76663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 562
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
E D++R+ ++ + M G + TY +++++L + ++ EA ++ K+ D +
Sbjct: 321 EGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAK- 379
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNA 203
F+ +I I G + EIF DM GVR +V + + M +A
Sbjct: 380 FYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISA 422
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 112 KWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI--Y 169
K M+ KG + ++ L+ LA+ G LD W F ++L T + I+I +
Sbjct: 62 KLMVLKGHSPSSFSFNNALDLLAKSGNLDRT---W-GFFTEYLGRTQFDVYSFGITIKAF 117
Query: 170 YNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
G K FE+ A ME +GV PNV I +++ A + G +D+
Sbjct: 118 CENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQ 160
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
+IT + L + I + K M+++ M TY +L++ L + GRL A+E++
Sbjct: 419 VITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQ 478
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+ + R + MIS + G+ ++ + + ME+ G PN ++ A +
Sbjct: 479 HLLIKGYHLDIRT-YTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEK 537
Query: 208 GMLDKYEKL 216
DK EKL
Sbjct: 538 DENDKAEKL 546
>gi|326507498|dbj|BAK03142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1043
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 58/134 (43%), Gaps = 5/134 (3%)
Query: 83 ELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEA 142
E+E + +K++ + M+ G R++ T+ ++++ G+L++A
Sbjct: 746 EVELDTVVYNTFIKSMLESGKLYSAASIYDRMIFSGVPRSLQTFNIMISVYGLGGKLEKA 805
Query: 143 EELWTKIFLDHLEGTP--RIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMM 200
E++T G P + M++ Y G H+ +F M+E G+ P + M
Sbjct: 806 TEMFTAA---QELGLPIDEKLYTNMLNFYGKAGRHQDASLLFNRMKEQGIMPGKISFNSM 862
Query: 201 GNAFQKLGMLDKYE 214
NA+ G+ D E
Sbjct: 863 INAYATSGLHDDAE 876
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
T+ LL+ AL + +D A EL+ + + P F F ++ Y G+ +K E+
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDE--MPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLN 206
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
ME GV PN + + + ++F + G D EKL +K
Sbjct: 207 SMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEK 242
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 107 IIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKM 165
+ ++ + +KG ++ T LL++L + + + +++ + H TP ++ F M
Sbjct: 146 VFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFD--IMCHCGVTPDVYLFSTM 203
Query: 166 ISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
++ + G + E+F ME++GV PNV + + + K G LD+ + K+K
Sbjct: 204 VNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEK 257
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 110 VTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIY 169
V M+ G TY +++ A + G LD A ELW ++ H I + ++
Sbjct: 574 VYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEM-KSHKIMPSSITCNTLVVGL 632
Query: 170 YNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG----MLDKYEKL 216
G EK + +M +G+ PN+ I ++ NA K G +L +E+L
Sbjct: 633 SEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQL 683
>gi|222624963|gb|EEE59095.1| hypothetical protein OsJ_10946 [Oryza sativa Japonica Group]
Length = 318
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%)
Query: 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL 129
+E G + + +E +IT ++ L IQV + +LS G ++ T+ L
Sbjct: 222 DEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVSTFTPL 281
Query: 130 LNALAEDGRLDEAEELWTKIFLDH 153
++ + E+G++D A EL F+ H
Sbjct: 282 IDTMCEEGQVDAAVELLKPFFIAH 305
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 86 FP-LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEE 144
FP ++T + L + + + K ML KG M TY LL+N L + +LD A
Sbjct: 471 FPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALN 530
Query: 145 LWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
LW + + ++ + +I + G E +++++M++ PN+ + + F
Sbjct: 531 LWCQALEKGFKPDVKM-HNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGF 589
Query: 205 QKLGMLDKYEKL 216
K+ ++ K+
Sbjct: 590 YKVRDFERASKI 601
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
+Y +++N L + G+ DE+ E+W ++ + G + +I G + ++ +
Sbjct: 232 SYNVMINGLCKCGKFDESFEIWHRMKKNE-RGQDLYTYSTLIHGLCGSGNLDGATRVYKE 290
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
M E GV P+V + + M N + + G +++ +L K
Sbjct: 291 MAENGVSPDVVVYNTMLNGYLRAGRIEECLELWK 324
>gi|357450749|ref|XP_003595651.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484699|gb|AES65902.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/132 (20%), Positives = 69/132 (52%), Gaps = 1/132 (0%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
+IT + + +KD++ + + + M G ++ Y +L+A +D ++D +
Sbjct: 614 VITYNTIIDSYGKKKDFRNMSRTVRKMQFDGFSVSLEAYNSMLDAYGKDSQMDAFRSV-L 672
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
K+ + + ++ +I+IY +G E++ ++ A++ E G+RP++ + + A+
Sbjct: 673 KMMKESNCASDLYTYNIVINIYGEQGWIEEVSDVLAELNECGLRPDLCSYNTLIKAYGIA 732
Query: 208 GMLDKYEKLKKK 219
GM+++ +L K+
Sbjct: 733 GMVEEAVELIKE 744
>gi|222631311|gb|EEE63443.1| hypothetical protein OsJ_18256 [Oryza sativa Japonica Group]
Length = 937
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI---FFDKMISIYYNRGMHEKMFEI 181
TY L+++ + GR+D+ + + K+ D E P+ FF++M G + ++
Sbjct: 437 TYTYLVDSCFKVGRVDDTIQYFYKM-ADGREHGPKFNIGFFNRMFEGLTEAGRMDDALKV 495
Query: 182 FADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKY------PPPKW 225
+ M + ++PN + + NA K G LDK +L PPP++
Sbjct: 496 YGRMPDKEIKPNTTTFETLVNALCKEGDLDKARELVSDMAKGGVTPPPEF 545
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 110 VTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIY 169
V +M+ G+ LL+ A+ G + +A KIF D L + ++ +++ Y
Sbjct: 284 VHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR----KIF-DRLAKRDVVSWNSLLTAY 338
Query: 170 YNRGMHEKMFEIFADMEELGVRPN-VSIVSMMGNAFQKLGMLDK----YEKLKKK-YPPP 223
G ++ F +M +G+RPN +S +S++ A G+LD+ YE +KK P
Sbjct: 339 AQHGFGKEAVWWFEEMRRVGIRPNEISFLSVL-TACSHSGLLDEGWHYYELMKKDGIVPE 397
Query: 224 KWEY 227
W Y
Sbjct: 398 AWHY 401
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL 129
E+ G + IA E +T + L ++V ML +G + TY +
Sbjct: 284 EDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTV 343
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
+N L+++G LDEA+ + ++ +D F+ +I ++ E+ ++ ++ G
Sbjct: 344 INCLSKNGELDEAKGIVNQM-VDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKG 402
Query: 190 VRPNVSIVSMMGNAFQKLG 208
+ P+V +++ NA K+G
Sbjct: 403 LSPDVYTFNILINALCKVG 421
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M+++GQ + TY +LL++L ++ L+EA L I +L ++ ++ +I G
Sbjct: 397 MVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQV-YNIIIDGMCRAG 455
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
E ++F+++ G+ P+V ++M + K G+L++ KL
Sbjct: 456 ELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKL 498
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 12/115 (10%)
Query: 87 PLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELW 146
P ++ L+TL+ + + + +W+ +KG +YFL++ L L+ A
Sbjct: 91 PSLSKTTVLQTLQLIRTPAKALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARN-- 148
Query: 147 TKIFLDHLE----GTPRI---FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNV 194
F+ +E G ++ FF+ +I Y G+ ++ ++F M+E+GV P+V
Sbjct: 149 ---FVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSV 200
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
R +Y L++ L E G+L EA E W ++ D T R + ++ G +
Sbjct: 253 RNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRT-YTVLVCALCESGRELEALS 311
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+F +M E G PNV +++ + K G +D+ K+
Sbjct: 312 LFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKM 347
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
I V++ LK E D+ R ++ ++S G + TY + A GRL+EAEE+ K
Sbjct: 575 ILVEEVLK----EYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIK 630
Query: 149 I-----FLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMM 200
I LD ++ +I+ Y G+ + F + M G P+ S++
Sbjct: 631 IKNEGVLLD------SFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSIL 681
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 3/133 (2%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
L +K + D + + +V M G + T+ ++NA + GR+D+ +E++
Sbjct: 258 LFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFN 317
Query: 148 KIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
+ +E P I F + Y G EK I M + GV PNV I + + + +
Sbjct: 318 DMVKAEIE--PDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCS 375
Query: 207 LGMLDKYEKLKKK 219
G ++ K+ +K
Sbjct: 376 AGKMEHAMKVYEK 388
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
T +++N ++G + +A + + L P +F F+ +I + + E + E+
Sbjct: 225 TCSIIVNGYCKEGNMVDASRFVFR--MKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLT 282
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
MEE GVRP+V S + NA+ G +DK +++
Sbjct: 283 LMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEI 315
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 86 FP-LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEE 144
FP ++T + L + + + K ML KG M TY LL+N L + +LD A
Sbjct: 496 FPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALN 555
Query: 145 LWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
LW + + ++ + +I + G E +++++M++ PN+ + + F
Sbjct: 556 LWCQALEKGFKPDVKM-HNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGF 614
Query: 205 QKLGMLDKYEKL 216
K+ ++ K+
Sbjct: 615 YKVRDFERASKI 626
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
+Y +++N L + G+ DE+ E+W ++ + G + +I G + ++ +
Sbjct: 257 SYNVMINGLCKCGKFDESFEIWHRMKKNE-RGQDLYTYSTLIHGLCGSGNLDGATRVYKE 315
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
M E GV P+V + + M N + + G +++ +L K
Sbjct: 316 MAENGVSPDVVVYNTMLNGYLRAGRIEECLELWK 349
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M+ G ++ TY ++L L + DEA L K+F +++ I F+ +IS + G
Sbjct: 639 MIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVK-FDIITFNIVISAMFKVG 697
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMM 200
++ E+F + G+ PN+ SMM
Sbjct: 698 RRQEAKELFDAISTYGLVPNIQTYSMM 724
>gi|410110149|gb|AFV61154.1| pentatricopeptide repeat-containing protein 123, partial
[Xeroaloysia ovatifolia]
Length = 431
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI ++ + + E+F M LG
Sbjct: 330 IHILAGAGRIEEATYVFRQA-IDAGEVRDITVFERMIHLFSKYKKYANVVEVFDKMRGLG 388
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL DK
Sbjct: 389 YFPDSNVIALVLNAYGKLHEFDK 411
>gi|294462101|gb|ADE76603.1| unknown [Picea sitchensis]
Length = 290
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168
++ + M KG Y LL+A ++G EAE+L ++ +H E + + +I+
Sbjct: 110 KLFRSMAEKGCIPDACVYNTLLDAYFKEGMFAEAEKLLEEMVTEHRE-PDSVTYTMLINE 168
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+ +G E +IFA+M E G++P+V++ + K D+ +KL ++
Sbjct: 169 FTKQGKMEGALKIFANMIEAGLKPDVTVYNKWFGLLCKESKFDEAQKLFQR 219
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
RT+ +Y +++ + G+L EA + K+ ++L G + +IS Y +G ++ +
Sbjct: 52 RTVMSYNAVMDGFCKAGQLQEALQYLDKLPENNL-GPNATSYTILISGYITQGKLQEAEK 110
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+F M E G P+ + + + +A+ K GM + EKL
Sbjct: 111 LFRSMAEKGCIPDACVYNTLLDAYFKEGMFAEAEKL 146
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 86 FP-LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEE 144
FP ++T + L + + + K ML KG M TY LL+N L + +LD A
Sbjct: 496 FPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALN 555
Query: 145 LWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
LW + + ++ + +I + G E +++++M++ PN+ + + F
Sbjct: 556 LWCQALEKGFKPDVKM-HNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGF 614
Query: 205 QKLGMLDKYEKL 216
K+ ++ K+
Sbjct: 615 YKVRDFERASKI 626
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
+Y +++N L + G+ DE+ E+W ++ + G + +I G + ++ +
Sbjct: 257 SYNVMINGLCKCGKFDESFEIWHRMKKNE-RGQDLYTYSTLIHGLCGSGNLDGATRVYKE 315
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
M E GV P+V + + M N + + G +++ +L K
Sbjct: 316 MAENGVSPDVVVYNTMLNGYLRAGRIEECLELWK 349
>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
Length = 674
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY +L L + +EAEEL ++ ++ + F I + G+ ++ E+
Sbjct: 221 TYNTVLKGLCFAKQWEEAEELMREMIRNNCHPN-EVTFATQIRAFCQNGLLDRAVELLEQ 279
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
M + G P+V I S + N F + G +D KL
Sbjct: 280 MPKYGCMPDVVIYSTLVNGFSEHGRVDDALKL 311
>gi|384251704|gb|EIE25181.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 905
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Query: 106 RIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT--PRIFFD 163
++++V + M+ KG R++ TY L++A + G+ + A EL+ ++ EG + ++
Sbjct: 368 KVMEVFQEMVHKGCERSVITYSSLISACEKAGQWELALELFNEM---AGEGCIPNTVTYN 424
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGM----LDKYEKLKKK 219
+I+ EK E+F M++ G P+V + + ++++K G L YE+++ +
Sbjct: 425 SLITACAQGAQWEKASEVFEQMQKGGCTPDVVTFTALISSYEKGGQWRRALGAYEQMRLQ 484
Query: 220 YPPP 223
P
Sbjct: 485 RCKP 488
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 105 KRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLE---GTPRIF 161
K + V + M + G TY +LLN + GR D+ +L+ ++ + + + GT
Sbjct: 327 KEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGT---- 382
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
++ +I ++ G +++ +F DM E V PN+ + A K G+ YE KK
Sbjct: 383 YNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGL---YEDAKK 436
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M+ KGQ Y +LL+ A G L + +L + D + R F + +I Y G
Sbjct: 334 MVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAF-NILICAYAKHG 392
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+K F +M + G+RP+V S + + K+G
Sbjct: 393 AVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIG 427
>gi|357487731|ref|XP_003614153.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515488|gb|AES97111.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 691
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M+ +G ++ TY LL+A G + ++W + + ++GT ++ F+ ++ + +G
Sbjct: 486 MIREGIKPSIETYTTLLDAFRRVGDTETLMKIWKLMMSEKVKGT-QVTFNILVDGFAKQG 544
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGM 209
+ + ++ ++ ++G++P V +M+ NA+ + G+
Sbjct: 545 LFMEARDVISEFGKIGLQPTVMTYNMLINAYARGGL 580
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 75/163 (46%), Gaps = 3/163 (1%)
Query: 47 KRIGTISKSAKLVTCIKG--LSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDW 104
K++G S I +S E+ Y ++ I ++ + T L D
Sbjct: 452 KKVGIKPTSHSYTAMIHAYSVSGWHEKAYAVFENMIREGIKPSIETYTTLLDAFRRVGDT 511
Query: 105 KRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDK 164
+ ++++ K M+S+ T T+ +L++ A+ G EA ++ ++ L+ T + ++
Sbjct: 512 ETLMKIWKLMMSEKVKGTQVTFNILVDGFAKQGLFMEARDVISEFGKIGLQPTV-MTYNM 570
Query: 165 MISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+I+ Y G+ + ++ +ME L +RP+ S + AF ++
Sbjct: 571 LINAYARGGLDSNIPQLLKEMEALRLRPDSITYSTVIYAFVRV 613
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 22/197 (11%)
Query: 38 RYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKA--- 94
RY WK + + T VTC + +++ + A D AW+ F + K
Sbjct: 263 RYKDAWKVYESMETDGVLPDHVTCSIMIIGMRKLGHSAKD---AWQF-FEKMNQKGVRWG 318
Query: 95 -------LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
+K+ E + + M KG Y L++A + R++EAE L+
Sbjct: 319 KEAFGALIKSFCVEGLLSEALIIQSEMEKKGISSNAIVYNTLMDAYCKSNRVEEAEGLFV 378
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE-IFADMEELGVRPNVSIVSMMGNAFQK 206
++ ++ T F ++ Y+R M K+ E + A+M++ G++PN + + + +A+ +
Sbjct: 379 EMKAKGIKPTAVTF--NILMYAYSRRMQPKIVESLLAEMKDFGLKPNANSYTCLISAYGR 436
Query: 207 LGML-----DKYEKLKK 218
+ D + K+KK
Sbjct: 437 QKKMSDMAADAFLKMKK 453
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 126 YFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFAD 184
Y L++ L + RL E +L T++ + L TP I + +I + GM +K F + +
Sbjct: 546 YNSLISGLFKSRRLVEVTDLLTEMGIRGL--TPNIVTYGALIDGWCKEGMLDKAFSSYFE 603
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
M E G+ N+ I S M + +LG +D+ L +K
Sbjct: 604 MTENGLSANIIICSTMVSGLYRLGRIDEANLLMQK 638
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 68/175 (38%), Gaps = 15/175 (8%)
Query: 71 EVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLL 130
E + D + +E ++T LK L + +Q+ M+ +G Y LL
Sbjct: 386 EAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLL 445
Query: 131 NALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGV 190
+ L + + A LW I + RI F+ MIS G + EIF M++LG
Sbjct: 446 DGLFKMENFEGASTLWKDILARGFTKS-RITFNTMISGLCKMGKMVEAEEIFDKMKDLGC 504
Query: 191 RPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYEL 245
P+ G ++ L +D Y K K +KG R P P E+
Sbjct: 505 SPD-------GITYRTL--IDGYCKASNVGQAFK-----VKGAMEREPISPSIEM 545
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 61/128 (47%), Gaps = 2/128 (1%)
Query: 86 FP-LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEE 144
FP L+TV + L K ++ ++ + +G TY L++ L + G +D+A
Sbjct: 423 FPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYR 482
Query: 145 LWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
L+ + LD + + +I ++ G E +IF +M G +P++++++ +
Sbjct: 483 LFENM-LDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCV 541
Query: 205 QKLGMLDK 212
K G ++K
Sbjct: 542 FKAGDVEK 549
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
+Y ++ L + GRL EAEEL+ + ++ P + ++ MI Y + G E +++
Sbjct: 289 SYTSMIWVLCKAGRLSEAEELFGQ--METERAVPCAYAYNTMIMGYGSAGQFENAYKLLD 346
Query: 184 DMEELGVRPNV----SIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYI 230
++E G P+V SI++ +G + L +E +KK P Y I
Sbjct: 347 QLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNII 397
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFF 162
D +++ + M +G T+ L+N +D ++DEA L+ K+ +D + F
Sbjct: 481 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM-IDSNVIPNEVTF 539
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPN 193
+ MI Y G K F+++ M E+G++P+
Sbjct: 540 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPD 570
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL 129
E+ G + IA E +T + L ++V ML +G + TY +
Sbjct: 282 EDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTV 341
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
+N L+++G LDEA+ + ++ +D F+ +I ++ E+ ++ ++ G
Sbjct: 342 INCLSKNGELDEAKGIVNQM-VDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKG 400
Query: 190 VRPNVSIVSMMGNAFQKLG 208
+ P+V +++ NA K+G
Sbjct: 401 LSPDVYTFNILINALCKVG 419
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 117 KGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHE 176
+G T+ TY LL AL R L +K+ + L+ +FF+ MI+ + G +
Sbjct: 100 EGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEKNGLK-PDSVFFNAMINAFSESGNVK 158
Query: 177 KMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ +IF M++ G +P S + + + GM ++ KL
Sbjct: 159 EAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKL 198
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
T+ L++ L + GR+D+A +++ K+ LD T I + +I ++N G E +I+ D
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKM-LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLK-KKYPPPKWEYRYIKGKRVRIP- 238
M P++ +++ + K G +K +E++K +++ P Y + ++
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 239 AKPKYEL 245
A YEL
Sbjct: 568 ANETYEL 574
>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
Length = 642
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY +L++AL ++GR DEA++ ++ + + + +D I Y G ++ D
Sbjct: 516 TYSILISALCKEGRFDEAKKKLLEMIVKDIS-PDSVIYDTFIHGYCKHGKTSLAIKVLRD 574
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
ME+ G P+ +++ F++ D+ KL
Sbjct: 575 MEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKL 606
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Query: 118 GQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT-PRIF-FDKMISIYYNRGMH 175
G G + T +++NAL +DG++++ +++ +G P I ++ +IS Y ++G+
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQV---QEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 176 EKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKY 220
E+ FE+ M G P V + + N K G KYE+ K+ +
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHG---KYERAKEVF 328
>gi|357499035|ref|XP_003619806.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355494821|gb|AES76024.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 302
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 5/131 (3%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
+I L L + I + K + +G M TY +L++ L ++GRL +A+E++
Sbjct: 65 IIIYTSLLDALFKNHQVDKAIALLKKIKDRGIEPDMFTYTMLVDGLCKNGRLKDAQEVYR 124
Query: 148 KIFLD--HLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQ 205
+ + H + MI+ G+ ++ + ++ME+ G P+V + A
Sbjct: 125 DLMVKGYHFNACMH---NVMINGLCKEGLFDEALFVLSEMEDNGCTPDVVTYKTLIRALF 181
Query: 206 KLGMLDKYEKL 216
K M DK KL
Sbjct: 182 KNDMNDKAVKL 192
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 106 RIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDK 164
R +++ M S G Y L+++ +GR +EAE L ++ D L P + F+
Sbjct: 204 RALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGL--FPDVVTFNS 261
Query: 165 MISIYYNRGMHEKMFEIFADM---EELGV-RPNVSIVSMMGNAFQKLGMLDKYEKL 216
IS + G + IF DM EELG+ RPN++ ++M F K GML++ + L
Sbjct: 262 RISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTL 317
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY +++N L + GRLDEA + + ++ L I +D I + G F + D
Sbjct: 530 TYSIIINGLCKAGRLDEARKKFIEMVGKSLH-PDSIIYDTFIHSFCKHGKISSAFRVLKD 588
Query: 185 MEELGVRPNV----SIVSMMGN---AFQKLGMLD 211
ME+ G ++ S++ +G+ F+ G+LD
Sbjct: 589 MEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLD 622
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
T LL+ L + GR ++A E++ K+ + P F F ++ Y G+ + E+
Sbjct: 153 TLNLLIAGLCDSGRFEDAREVFDKMGVKGCR--PNEFSFGILVRGYCRAGLSMRALELLD 210
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
M GV+PN I + + ++F + G ++ E+L ++
Sbjct: 211 GMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVER 246
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 110 VTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIY 169
V +M+ G+ LL+ A+ G + +A KIF D L + ++ +++ Y
Sbjct: 284 VHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR----KIF-DRLAKRDVVSWNSLLTAY 338
Query: 170 YNRGMHEKMFEIFADMEELGVRPN-VSIVSMMGNAFQKLGMLDK----YEKLKKK-YPPP 223
G ++ F +M +G+RPN +S +S++ A G+LD+ YE +KK P
Sbjct: 339 AQHGFGKEAVWWFEEMRRVGIRPNEISFLSVL-TACSHSGLLDEGWHYYELMKKDGIVPE 397
Query: 224 KWEY 227
W Y
Sbjct: 398 AWHY 401
>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
Length = 845
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M+ G ++ TY ++L L + DEA L K+F +++ I F+ +IS + G
Sbjct: 660 MIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVK-FDIITFNIVISAMFKVG 718
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMM 200
++ E+F + G+ PN+ SMM
Sbjct: 719 RRQEAKELFDAISTYGLVPNIQTYSMM 745
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 112 KWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI--Y 169
K M+ KG + ++ L+ LA+ G LD W F ++L T + I+I +
Sbjct: 62 KLMVLKGHSPSSFSFNNALDLLAKSGNLDRT---W-GFFTEYLGRTQFDVYSFWITIKAF 117
Query: 170 YNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
G K FE+ A ME +GV PNV I +++ A + G +D+
Sbjct: 118 CENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQ 160
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 66/164 (40%), Gaps = 39/164 (23%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD---------- 152
D + ++ + ML+KG + TY + +N L + G L+EA EL K+ D
Sbjct: 497 DTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYT 556
Query: 153 ----------HLEGTPRIFFDKM------ISIYYNRGMHEKMFE--------IFADMEEL 188
HL IF+D + + Y +H F +M+E
Sbjct: 557 SFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEK 616
Query: 189 GVRPNVSIVSMMGNAFQKLGMLDKYEKL-----KKKYPPPKWEY 227
GV PNV +++ N F K+ +D+ K +K P K+ Y
Sbjct: 617 GVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTY 660
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 35/146 (23%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEG--TPRIF-FDKMISIYY 170
MLS+GQ T+ TY +L++A A +GRLD A FL+ E P + ++ +I+ +
Sbjct: 578 MLSRGQTPTVVTYTVLIHAHALNGRLDWA----MAYFLEMQEKGVVPNVITYNVLINGFC 633
Query: 171 NRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWE---- 226
++ + F +M+E G+ PN +++ N +G KW+
Sbjct: 634 KVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMG---------------KWQEALR 678
Query: 227 -YRYIKGKRVRIPAKPKYELDSATEG 251
Y + GKR+R P DS T G
Sbjct: 679 LYAQMLGKRIR-P-------DSCTHG 696
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI-FFDKMISIYYNR 172
M + GQ + TY +LL+ L ++G L+EA +L+ I E P I F ++
Sbjct: 1321 MQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSI--KKTEHKPNIEVFSILLDGMCRA 1378
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
G E+ ++ F ++ + G+ P+ +++ N GML + KL
Sbjct: 1379 GKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKL 1422
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L EK R I+ + M+S+G + TY LL AL +DG+ D A E+ + L
Sbjct: 391 LHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQ--LSSK 448
Query: 155 EGTP-RIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKY 213
+P I ++ +I G E E+ +M G++P++ S + G +D+
Sbjct: 449 GCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEA 508
Query: 214 EKL 216
K+
Sbjct: 509 IKI 511
>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
Length = 773
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T K + T R+ ++ + M +G + Y L+ A A+ G + A ++ +
Sbjct: 224 VTYKSLVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQ 283
Query: 149 IFLDHLEGTPRI-FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+ P + + ++ IY N+G E++ +F+DM+EL P V+ + + F +
Sbjct: 284 --MQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEG 341
Query: 208 G 208
G
Sbjct: 342 G 342
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEG-TPRIF-FDKMISIYYNRGMHEKMFEIF 182
T+ L+N L GR A E + + G TP +F + MI + G K FE+F
Sbjct: 261 TFNTLINCL---GRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMF 317
Query: 183 ADMEELGVRPNVSIVSMMGNAFQKLGML----DKYEKLKKKYPPP 223
DME+ G NV +++ +A K G D Y +KKK P
Sbjct: 318 GDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILP 362
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY L+N L + GRL EA+ L ++ L+ + + ++ + G + F+I +
Sbjct: 317 TYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNV-VVYATLVDGFMKEGKAAEAFDILNE 375
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL-----KKKYPPPKWEYR 228
M GV+PN + + K+G L + KL K + P + Y
Sbjct: 376 MISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYH 424
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 126 YFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFAD 184
Y L++ L + RL E +L T++ + L TP I + +I + GM +K F + +
Sbjct: 580 YNSLISGLFKSRRLVEVTDLLTEMGIRGL--TPNIVTYGALIDGWCKEGMLDKAFSSYFE 637
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
M E G+ N+ I S M + +LG +D+ L +K
Sbjct: 638 MTENGLSANIIICSTMVSGLYRLGRIDEANLLMQK 672
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 68/175 (38%), Gaps = 15/175 (8%)
Query: 71 EVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLL 130
E + D + +E ++T LK L + +Q+ M+ +G Y LL
Sbjct: 420 EAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLL 479
Query: 131 NALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGV 190
+ L + + A LW I + RI F+ MIS G + EIF M++LG
Sbjct: 480 DGLFKMENFEGASTLWKDILARGFTKS-RITFNTMISGLCKMGKMVEAEEIFDKMKDLGC 538
Query: 191 RPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYEL 245
P+ G ++ L +D Y K K +KG R P P E+
Sbjct: 539 SPD-------GITYRTL--IDGYCKASNVGQAFK-----VKGAMEREPISPSIEM 579
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 3/160 (1%)
Query: 62 IKGLSNVK--EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQ 119
I G ++ ++ G L+ L +T + L + + I + M++ GQ
Sbjct: 437 INGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQ 496
Query: 120 GRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMF 179
+ TY +LL+ L ++ L EA L I +L+ ++ + I G E
Sbjct: 497 IPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVY-NIAIDGMCRAGELEAAR 555
Query: 180 EIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
++F+++ G++P+V ++M + K G+LD+ KL +K
Sbjct: 556 DLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRK 595
>gi|356556344|ref|XP_003546486.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
mitochondrial-like isoform 1 [Glycine max]
gi|356556346|ref|XP_003546487.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
mitochondrial-like isoform 2 [Glycine max]
Length = 538
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI 149
TVK AL+ LE+ + KR R + + ++ AL +D+A+EL K+
Sbjct: 316 TVKFALEMLEDIPEEKR-------------ERAIKPFLAVVRALCRIKEVDKAKELVLKM 362
Query: 150 FLDHLEGTP--RIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
D G P F+ +++ Y G K E+ ME G+RP+V +++ +A+
Sbjct: 363 IED---GPPPGNAVFNFVVTAYSKAGEMGKAVEMMRLMESRGLRPDVYTYTVLASAYSNG 419
Query: 208 GMLDKYEKL----KKKY 220
G +++ +K+ KKK+
Sbjct: 420 GEMEEAQKILAEVKKKH 436
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 106 RIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKM 165
+ +++ + M S+G + TY +L +A + G ++EA+++ ++ H + P + F +
Sbjct: 389 KAVEMMRLMESRGLRPDVYTYTVLASAYSNGGEMEEAQKILAEVKKKHAKLGP-VMFHTL 447
Query: 166 ISIYYNRGMHEKMFEIFADMEELGVRPNV 194
I Y ++ ++ A+M++ GV P+V
Sbjct: 448 IRGYCKLEQFDEALKLLAEMKDYGVHPSV 476
>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
Length = 637
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
ML +G ++ TY L+NA G + +A+E+W ++ ++ P + + MI +
Sbjct: 169 MLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQID--PNVITYTSMICVLCEE 226
Query: 173 GMHEKMFEIFADMEELGVRPN 193
G +F M+E G+RPN
Sbjct: 227 GCIGDAERLFDAMKEAGMRPN 247
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 128 LLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEE 187
+LN A+ G ++EA E++ D +E + + I Y + G E FEIF ME+
Sbjct: 166 CILNMYAKCGSIEEAREVF-----DKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQ 220
Query: 188 LGVRPN-VSIVSMMGNAF 204
GV PN ++ +S++ NAF
Sbjct: 221 EGVVPNRITYISVL-NAF 237
>gi|242083798|ref|XP_002442324.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
gi|241943017|gb|EES16162.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
Length = 647
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
TY L+N + GRLD L + + P + + +I IY GMH F ++
Sbjct: 236 TYNSLINGYGKQGRLDMVAFLVQDMRAQGV--APSVLTYSTLIDIYSKAGMHGDAFNVYL 293
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLD 211
D +E G++ +V + S + K G+++
Sbjct: 294 DFKESGLKADVVLFSSFIDTLAKNGLVE 321
>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
Length = 532
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 71/163 (43%), Gaps = 5/163 (3%)
Query: 59 VTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQ-VTKWMLSK 117
C G N+ + AL I L I+ L+TL EK + V +W
Sbjct: 22 CCCYVGCLNLA---FAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNIVIRWTPKL 78
Query: 118 GQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHE 176
G + +Y +LL L ++ + +EA +L + D P + + +I ++
Sbjct: 79 GCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVG 138
Query: 177 KMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
K + +F +M + G+ P+V + + + K+ +DK E++ ++
Sbjct: 139 KAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQ 181
>gi|255553476|ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543051|gb|EEF44586.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 486
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 29/205 (14%)
Query: 29 VCAARGPRPR---YPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVY--GALDSFIAWE 83
V G RP Y + A G ++K+ V +K +S+ K +VY L +
Sbjct: 153 VMQTEGLRPTIDVYTALVSAYGESGLLAKAFSTVDEMKSVSDCKPDVYTYSVLINICTKL 212
Query: 84 LEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAE 143
F LI RI+ ++ G + T+ ++N + E E
Sbjct: 213 HRFDLI---------------GRILSEMSYL---GVECSTVTFNTIINGYGKAKMFREME 254
Query: 144 ELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGN 202
T + ++ P +F F+ +I Y N G EKM + + + + +G+ P++ +++
Sbjct: 255 NSLTNM-IEIGNSVPDLFTFNSVIGAYGNSGRIEKMEKWYNEFQLMGISPDIKTFNILIK 313
Query: 203 AFQKLGMLDK----YEKLKKKYPPP 223
++ K GM +K E +KK++ PP
Sbjct: 314 SYGKAGMYEKINSVIEFMKKRFFPP 338
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M+++GQ + TY +LL++L ++ L+EA L I +L ++ ++ +I G
Sbjct: 406 MVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQV-YNIIIDGMCRAG 464
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
E ++F+++ G+ P+V ++M + K G+L++ KL
Sbjct: 465 ELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKL 507
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M+ G ++ TY ++L L + DEA L K+F +++ I F+ +IS + G
Sbjct: 659 MIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVK-FDIITFNIVISAMFKVG 717
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMM 200
++ E+F + G+ PN+ SMM
Sbjct: 718 RRQEAKELFDAISTYGLVPNIQTYSMM 744
>gi|293330977|ref|NP_001169349.1| uncharacterized protein LOC100383216 [Zea mays]
gi|30961817|gb|AAP37977.1| PPR2 [Zea mays]
gi|224028857|gb|ACN33504.1| unknown [Zea mays]
gi|414883415|tpg|DAA59429.1| TPA: pentatricopeptide repeat 2 [Zea mays]
Length = 571
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 37 PRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALK 96
P+ R WKA + G + T L NVK+ + D+ AW TV +AL
Sbjct: 137 PQGKRHWKAGEFPGAAAAPGS-GTPRTPLKNVKKRLDARADA-KAWA-----CTVTEALA 189
Query: 97 TLENEKDWKRIIQVTKWMLSKG-QGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLE 155
+ K+W+ +QV + + + GTY L+ L G+ A +L+ ++ +
Sbjct: 190 DRVSSKNWQEALQVFEMLKEQPFYHPKEGTYMKLIVLLGRSGQPTRAHQLFDEMLQQGCQ 249
Query: 156 GTPRIFFDKMISIYYNRGMHEKMFEIFADME 186
TP + + +I Y G+ ++ ++ DM+
Sbjct: 250 PTPEL-YTALIGAYCRSGLLDEALQLLNDMK 279
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 4/107 (3%)
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
R + TY +++ L + G +DEA ELW + D + F +I G K F
Sbjct: 366 RNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFT 425
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGML----DKYEKLKKKYPPP 223
IF + G + +V S M N +G L YEK+ K P
Sbjct: 426 IFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKP 472
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 99 ENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP 158
+ E D ++ +++ +L KG TY +L+ GR++EA EL T++ D +
Sbjct: 764 KGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVS-PD 821
Query: 159 RIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN 193
I + MI+ R +K E++ M E G+RP+
Sbjct: 822 CITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g39230, mitochondrial; AltName: Full=Protein LATERAL
ORGAN JUNCTION; Flags: Precursor
gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
Length = 867
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLE-GTPRIF 161
D ++ + M G+ + T+ L+N + R+D A E+ ++ L+ P
Sbjct: 605 DTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPA-- 662
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+ +I + + + + +F+++ ELG+ PNVS+ + + + F+ LG +D L KK
Sbjct: 663 YGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKK 720
>gi|357139769|ref|XP_003571450.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Brachypodium distachyon]
Length = 517
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI-FLDHLEGTPRIFF 162
WK ++QV + SK ++ L + A + G +++AEE+W +I L T + F
Sbjct: 312 WK-LMQVLPHIRSK-------SFTLAIEAFGKIGSIEQAEEIWGEIKSARKLRLTEQ--F 361
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ M+S+Y G+ +K +F +M G +PN + K G++ +
Sbjct: 362 NSMLSVYCRHGVVDKASAVFKEMRASGCQPNAITYRHLALGCLKAGLVKQ 411
>gi|297822475|ref|XP_002879120.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324959|gb|EFH55379.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 483
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
++T K + D++ + + K M + + +Y +L++ G+L+EAE L +
Sbjct: 246 IVTFKSMIDCCVKRWDFEELDLILKLMEKESVTLDLDSYKVLIDGFTSYGKLEEAERLVS 305
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+ D ++ +++ Y G+ EK FE+ ++M GV PN ++ N K
Sbjct: 306 TMH-DKKLRVETYLYNLIMNGYCRFGLVEKAFELHSEMSSRGVTPNKDTYWVLMNGLCKA 364
Query: 208 G 208
G
Sbjct: 365 G 365
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M S+G TY++L+N L + G++ EA L ++ ++ E ++ + Y G
Sbjct: 342 MSSRGVTPNKDTYWVLMNGLCKAGKVCEAISLLNELRVNEFEIDKEMYI-ALTEGCYRVG 400
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
M +K E+ A+M G P+ +I + +A
Sbjct: 401 MIDKSLEVVAEMIREGFIPDATICERLADAL 431
>gi|449442465|ref|XP_004139002.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g47360-like [Cucumis sativus]
gi|449505643|ref|XP_004162530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g47360-like [Cucumis sativus]
Length = 475
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 126 YFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR-IFFDKMISIYYNRGMHEKMFEIFAD 184
Y L++ E G +D+A EL + +D ++ P I + M+ + + G E + +F D
Sbjct: 167 YNLVIRLFTEKGEMDKAMELMKE--MDSVDIHPNMITYISMLKGFCDVGRWEDAYGLFKD 224
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
M+E G PN + S++ N +L ++D+ ++ K+
Sbjct: 225 MKENGCAPNTVVYSVLVNGAIRLRIMDRLMEMLKE 259
>gi|357517181|ref|XP_003628879.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522901|gb|AET03355.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 633
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
L++A A G + A L+ D + + + MIS Y + G ++ E+F +E L
Sbjct: 295 LVSAYALRGEVKVARRLF-----DQMGERDVVSWTAMISGYSHAGCFQEALELFVKLEGL 349
Query: 189 GVRPN-VSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKG 232
G++P+ V++V+ + +A +LG L+ ++ ++Y W +G
Sbjct: 350 GMKPDEVAVVAAL-SACARLGALELGRRIHRQYAGENWTCSINRG 393
>gi|302798306|ref|XP_002980913.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
gi|300151452|gb|EFJ18098.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
Length = 809
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 12/118 (10%)
Query: 92 KKALKTLENEKDWKRIIQVTKWM-----LSKGQGRTMGTYFLLLNALAEDGRLDEAEELW 146
K L TL N + ++ WM + G R LL+ A GR+D+A E++
Sbjct: 223 KVLLLTLLNVCSSRGVLDEDSWMAHDYIVGSGLDREAVVATALLSMFARCGRVDKAREIF 282
Query: 147 TKIFLDHLEGTPRIF--FDKMISIYYNRGMHEKMFEIFADMEELGVRPN-VSIVSMMG 201
K+ DH + ++ ++ MI+ Y +RG ++ + ++ GV+PN ++ +S +G
Sbjct: 283 EKV-ADH---SAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVKPNCITFISSLG 336
>gi|255661174|gb|ACU25756.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 426
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI ++ + + E+F +M LG
Sbjct: 327 IHILAGAGRIEEATWVFRQA-IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDEMRGLG 385
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL DK
Sbjct: 386 YFPDSNVIALVLNAYGKLHEFDK 408
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 4/133 (3%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMG-TYFLLLNALAEDGRLDEAEELW 146
LIT + L K I++ + M+SK Q TY L+N ++D A ++
Sbjct: 279 LITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGXKVDRALKIM 338
Query: 147 TKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQ 205
F+ P +F + +++ + G E+ E+F +M+ LG++P+ + + N F
Sbjct: 339 E--FMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFC 396
Query: 206 KLGMLDKYEKLKK 218
+ G +D+ +L K
Sbjct: 397 RAGRVDEAMELLK 409
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M S G + TY L+ A + ++AEEL+ ++ + + R F+ M+ Y G
Sbjct: 1010 MRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYK-LDRAFYHLMMKTYRTSG 1068
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
H K + A M+E G+ P +S + ++ ++ K G ++ E + K
Sbjct: 1069 DHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLK 1113
>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 4/167 (2%)
Query: 47 KRIGTISKSAKLVTCIKGLS---NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKD 103
+ IG +S + I L V E L+ F+A E++ LK
Sbjct: 260 QAIGLTPRSNAVTALISALGIAGRVPEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGS 319
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163
K V M G TY LL++A GR + A L ++ D ++ + +F
Sbjct: 320 LKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVF-S 378
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML 210
++++ + +RG +K F + +M GV+P+ ++M + F K L
Sbjct: 379 RILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCL 425
>gi|302776756|ref|XP_002971525.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
gi|300160657|gb|EFJ27274.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
Length = 356
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 116 SKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGM 174
S+G T+ +Y +++ A ++G +D+ EE+ ++ L P +F F+ +I+ Y
Sbjct: 91 SRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELR--PDLFSFNALIAAYAMSRK 148
Query: 175 HEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGM 209
E+ ++F++M+ GV P++ + + F + M
Sbjct: 149 PERGLQVFSNMKAAGVLPDIVTYTTLIQMFSRSAM 183
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 123 MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIF 182
+ TY L+ A + + +AEEL+ ++ L R F+ M+ IY N G H K ++
Sbjct: 980 LDTYKSLIAAFGKQQLVVDAEELFEEL-LSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLL 1038
Query: 183 ADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ M++ GV P ++ + ++ ++ G + EK+
Sbjct: 1039 SMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKV 1072
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M+ G ++ TY ++L L + DEA L K+F +++ I F+ +IS + G
Sbjct: 583 MIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVK-FDIITFNIVISAMFKVG 641
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMM 200
++ E+F + G+ PN+ SMM
Sbjct: 642 RRQEAKELFDAISTYGLVPNIQTYSMM 668
>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
Length = 766
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 14/99 (14%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD--KMISIYYNRGMHEKMFEIFADME 186
L++ A+ G LD+A +L+ + GT R F +I Y G ++ ++FA M
Sbjct: 494 LIDTYAKCGSLDDANKLFE------IMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMR 547
Query: 187 ELGVRPN-VSIVSMMGNAFQKLGMLDK----YEKLKKKY 220
LGV+PN V+ V ++ A ++G++D+ Y +K +Y
Sbjct: 548 NLGVKPNHVTFVGVL-TACSRVGLVDEGCYYYSIMKPEY 585
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 150 FLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN----VSIVSMMGNAFQ 205
LD L + ++ MIS Y RG++E+ F+ F M +G++ + S++S G+ +
Sbjct: 239 LLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNE 298
Query: 206 KLGMLD 211
K+GM +
Sbjct: 299 KMGMFN 304
>gi|15240991|ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g38730
gi|10176899|dbj|BAB10131.1| unnamed protein product [Arabidopsis thaliana]
gi|332006971|gb|AED94354.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L +L ++ + ++ K M+ G + Y +L++A ++ G ++AE+L ++ ++
Sbjct: 175 LNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSE--MEEK 232
Query: 155 EGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKY 213
P IF ++ +IS+Y + MH + + ME GV PN+ + + F + G + +
Sbjct: 233 GVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREA 292
Query: 214 EKL 216
+L
Sbjct: 293 TRL 295
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 126 YFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFAD 184
Y L++ L + RL E +L T++ + L TP I + +I + GM +K F + +
Sbjct: 580 YNSLISGLFKSRRLVEXTDLLTEMGIRGL--TPNIVTYGALIDGWCKEGMLDKAFSSYFE 637
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
M E G+ N+ I S M + +LG +D+ L +K
Sbjct: 638 MTENGLSANIIICSTMVSGLYRLGRIDEANLLMQK 672
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT-PRIF-FDKMI 166
Q+ M+ +G Y L++ L + GRL EA++L+ + H G P +F + ++
Sbjct: 396 QLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNM---HSNGNLPDLFTYSMLL 452
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ G K F +F M+ ++P++++ +++ +A K G L KL
Sbjct: 453 DGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKL 502
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFF 162
D +++ + M +G T+ L+N +D ++DEA L+ K+ +D + F
Sbjct: 458 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM-IDSNVIPNEVTF 516
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPN 193
+ MI Y G K F+++ M E+G++P+
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPD 547
>gi|156070779|gb|ABU45192.1| unknown [Petunia integrifolia subsp. inflata]
Length = 406
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 54/113 (47%)
Query: 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163
+ +++ M G R+ ++ +LL+A + D +L+ ++ + + ++ +
Sbjct: 116 FDHALKIYDQMDDLGTPRSAISFNVLLSACVNTKQYDRVRQLFDEMPVKYGFLPDKVSYG 175
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+I Y G+ EK E +MEE GV + + +AF K GM D+ EK+
Sbjct: 176 ILIRSYCEMGLPEKAMERLKEMEEKGVEITAITFTTLLHAFYKKGMGDEAEKV 228
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 126 YFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADM 185
Y LL A+ + G ++ A L+ + +D G I + MI G + + ++ DM
Sbjct: 443 YIPLLAAMCQQGMMERAMGLFNE--MDKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDM 500
Query: 186 EELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+ G+ P+ SM+ N + KLG L++ E++ K+
Sbjct: 501 LDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQ 534
>gi|255541714|ref|XP_002511921.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549101|gb|EEF50590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 248
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
ML G Y+ L++ L++ R+D+A + TK L P I ++ +I + N+
Sbjct: 1 MLRDGCTPDAMVYYKLISGLSQARRMDDAASVLTK--LKEAGFCPDIVCYNILIGGFCNK 58
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+K E+ DMEE G+ P+ + + + F K+G + ++ K+
Sbjct: 59 NRLDKAREMLNDMEEAGLEPDTITYNTLISYFGKIGDIKVAHRMMKQ 105
>gi|414868427|tpg|DAA46984.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 674
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 105 KRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDK 164
+R ++ K M G + T+ L+N + G + +A+ + K+ ++H I F
Sbjct: 442 ERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKA-FLKMVMEHGLMPDVITFTS 500
Query: 165 MISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+I + + F F++M E GVRPNV +++ + G + K +L K
Sbjct: 501 LIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNK 555
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 4/107 (3%)
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
R + TY +++ L + G +DEA ELW + D + F +I G K F
Sbjct: 366 RNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFT 425
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGML----DKYEKLKKKYPPP 223
IF + G + +V S M N +G L YEK+ K P
Sbjct: 426 IFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKP 472
>gi|356552149|ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Glycine max]
Length = 481
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 148 KIFLDHLEG---TPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNA 203
K +D +E TP I ++ +I ++ G EKM + F M+ LGV+PN + +A
Sbjct: 321 KTVMDFMEKRFFTPTIVTYNTVIEVFGKAGEIEKMDQHFLKMKHLGVKPNSITYCSLVSA 380
Query: 204 FQKLGMLDKYEKLKK 218
+ K+G +DK + + +
Sbjct: 381 YSKVGCIDKVDSIMR 395
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
T+ L+NALA +G ++AEE++ ++ E P ++ ++ ++ Y G EIF+
Sbjct: 297 TFTALVNALAREGLCEKAEEIFEQMQEAGYE--PDVYAYNALMESYSRAGFPYGAAEIFS 354
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGM 209
M+ +G P+ + ++M +A+ + G+
Sbjct: 355 LMQHMGCEPDRASYNIMVDAYGRAGL 380
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 17/151 (11%)
Query: 68 VKEEV-----YGALDSFIA----WELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKG 118
V+EEV + +LD+ A W+ +I+V L+ K W II + +W+++K
Sbjct: 96 VREEVDYMGLWDSLDTLPATNSTWD---DIISVAVQLRL---NKKWGPIILICEWIMNKS 149
Query: 119 QGR-TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEK 177
R + Y LL++A + + E + ++ H T + ++ Y G+ EK
Sbjct: 150 TFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDT-YALLLKAYCKSGLLEK 208
Query: 178 MFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+FA+M + G+ P+ + + + K G
Sbjct: 209 AEAVFAEMRKYGLSPSAIVYNAYIDGLVKGG 239
>gi|414868428|tpg|DAA46985.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 683
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 105 KRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDK 164
+R ++ K M G + T+ L+N + G + +A+ + K+ ++H I F
Sbjct: 442 ERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKA-FLKMVMEHGLMPDVITFTS 500
Query: 165 MISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+I + + F F++M E GVRPNV +++ + G + K +L K
Sbjct: 501 LIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNK 555
>gi|302761046|ref|XP_002963945.1| hypothetical protein SELMODRAFT_82351 [Selaginella moellendorffii]
gi|300167674|gb|EFJ34278.1| hypothetical protein SELMODRAFT_82351 [Selaginella moellendorffii]
Length = 376
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 61/115 (53%), Gaps = 10/115 (8%)
Query: 107 IIQVTKWMLSKGQGR-TMGTYF--LLLNALAEDGRLDEAEELWTKIFLDHLEGTPR-IFF 162
+Q+ + L K + R +G++F LL++ L++ G+LD+A +++ ++ +P + F
Sbjct: 220 CVQLVQEFLEKHRARLDLGSFFHNLLISTLSKHGKLDDARKVFREL------ASPELVHF 273
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLK 217
+ +S R + + F+++ +++ G+ P+ +++ +G D+ LK
Sbjct: 274 NSFMSALCQRKLISEAFQVYEQLQKKGLVPDTYTYTILIGGLCDVGRTDQALSLK 328
>gi|410129734|dbj|BAM64814.1| bvCRP-1 [Beta vulgaris]
Length = 517
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
+ L N W + + + M +G ++ Y +L++ + G+ AE+ + + + +
Sbjct: 333 ISQLGNLGKWDLLRENFEKMKYRGHKKSGAVYAVLVDIYGQYGKFQGAEDCISALRAEGV 392
Query: 155 EGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+ + I+ M + Y +G+ E+ ++ ME G+ PN+ +++++ NAF G
Sbjct: 393 QMSSNIY-SVMANAYAQQGLCEETVKVLQVMEAEGIEPNLIMLNILINAFGIAG 445
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEG-TPRIF-FDKMISIYYNRGMHEKMFEIF 182
T+ L+N L GR A E + + G TP +F + MI + G K FE+F
Sbjct: 261 TFNTLINCL---GRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMF 317
Query: 183 ADMEELGVRPNVSIVSMMGNAFQKLGML----DKYEKLKKKYPPP 223
DME+ G NV +++ +A K G D Y +KKK P
Sbjct: 318 GDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILP 362
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
TY +L+ L +DG++DEA L K +++L+ P + ++ +I+ ++ K FE+
Sbjct: 319 TYNMLIGGLCKDGKIDEAFRL--KDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELID 376
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLD 211
ME GV+PN +++ + K G +D
Sbjct: 377 KMEGKGVKPNAVTYNVVVKWYVKEGKMD 404
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF- 161
D KR + M+ KG T+ TY L+ L + R+ EA+ L++KI + L P I
Sbjct: 406 DAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGL--LPDIIV 463
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPN 193
F+ +I + G ++ F++ +M+ + V P+
Sbjct: 464 FNALIDGHCANGNIDRAFQLLKEMDNMKVLPD 495
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR-IFFDKMISIYYNRGMHEKMFEIFA 183
T+ ++N L + GR+++A +++ ++ + L TP + ++ ++S Y G + +FA
Sbjct: 227 TFNTVVNGLCKAGRMEDARKMFDEMAREGL--TPDGVSYNTLVSGYCKAGCLHEALAVFA 284
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+M + GV P+V + + +A + G L++
Sbjct: 285 EMAQKGVVPDVVTFTSLIHAMCRAGNLER 313
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 39.3 bits (90), Expect = 2.3, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M++ GQ + TY +LL+ L ++ L EA L I +L+ + ++ I G
Sbjct: 839 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADI-LVYNIAIDGMCRAG 897
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
E ++F+++ G++P+V ++M + K G+LD+ KL +K
Sbjct: 898 ELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRK 943
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 119 QGRTMG------TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYN 171
Q R MG TY L++ + G L+E L+ + + + P I ++ +I+ Y
Sbjct: 314 QMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNE--MKDVGCVPDIITYNGLINCYCK 371
Query: 172 RGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ FE F++M+ G++PNV S + +AF K GM+ KL
Sbjct: 372 FEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKL 416
>gi|406935493|gb|EKD69446.1| hypothetical protein ACD_47C00118G0002 [uncultured bacterium]
Length = 217
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 18/99 (18%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTK---------IFLDHLEGTPRIFFDKMISIYYNRGMH 175
+Y L + E+G++DEA + K I DHL+ ++ K++ +Y G
Sbjct: 100 SYNDLADVYVEEGKVDEAIAVLKKLAAMKLPSYIPADHLKDKKKMVAMKIVQVYLKAG-- 157
Query: 176 EKMFEIFADME------ELGVRPNVSIVSMMGNAFQKLG 208
K E A+ E ELG + SMMGNA++K G
Sbjct: 158 -KDAEALAEAESLVKGGELGTEEQAHLYSMMGNAYKKRG 195
>gi|356564579|ref|XP_003550529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Glycine max]
Length = 576
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
R + Y ++ +G+ +A +L+ ++ + + G + + +++ Y + G+ EK ++
Sbjct: 395 RDLVAYSAMIYGCGINGKASDAIKLFEQMLAECI-GPNLVTYTGLLTAYNHAGLVEKGYQ 453
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYP 221
F M++ G+ P++ +M + F + G LD+ KL P
Sbjct: 454 CFNSMKDYGLVPSIDHYGIMVDLFGRAGYLDEAYKLILNMP 494
>gi|225428586|ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Vitis vinifera]
Length = 492
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
+Y +L+ A ++GR+ E E+LW ++ + +E + ++ +I + G E+ E+F +
Sbjct: 282 SYSVLMAAFCDEGRMGEVEKLWEEMRMKKMEHDI-MAYNTIIGGFCRIGEIERGEELFRE 340
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLD 211
ME G++ + N + ++G +D
Sbjct: 341 MELSGIQSTCVTYEHLINGYCEIGDVD 367
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 21/164 (12%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIF---- 150
+K N K ++ I + K + S+G T+ T L+ ++ D E++ ++F
Sbjct: 165 IKACLNSKRIEQSISIVKMLRSRGISPTISTCNALIWQVSRGRGCDAGYEIYREVFGSWD 224
Query: 151 -----------LDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVS 198
+ P + F+ ++ +Y G EK+ EI+A+M E PN S
Sbjct: 225 DEINEKVRVRVRVRVRVCPNVHTFNALMVCFYRDGGVEKVEEIWAEMGEWDCNPNAYSYS 284
Query: 199 MMGNAFQKLGMLDKYEKLKKKYPPPKWE-----YRYIKGKRVRI 237
++ AF G + + EKL ++ K E Y I G RI
Sbjct: 285 VLMAAFCDEGRMGEVEKLWEEMRMKKMEHDIMAYNTIIGGFCRI 328
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMIS 167
+V + M +G + TY L+N L +G+LDEA L K + + P + ++ +I+
Sbjct: 320 KVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDK--MSGMGLKPNVVTYNALIN 377
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
+ + M ++ E+ D+ + G+ PNV + + +A+ K G +D
Sbjct: 378 GFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMD 421
>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
Length = 574
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
+DW+ + + M KG + TY +L+ AL G + +A +L ++ LE +
Sbjct: 414 SRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLE-PKHV 472
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKY-----EK 215
++ +I+ + +G + EI ME+ R NV ++ F K+G +D+ E
Sbjct: 473 AYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEM 532
Query: 216 LKKKYPPPKWEYRYIKGKRVR---IPAKPKYELD 246
L+K P + Y I + +P Y D
Sbjct: 533 LEKGLVPNRITYEIINSGMIEKGYVPDISGYAAD 566
>gi|302820236|ref|XP_002991786.1| hypothetical protein SELMODRAFT_23607 [Selaginella moellendorffii]
gi|300140467|gb|EFJ07190.1| hypothetical protein SELMODRAFT_23607 [Selaginella moellendorffii]
Length = 299
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
LI + +A LE+ +D + ++ +W+ + + LL+N G D+A +
Sbjct: 84 LINLVEACSELESLEDGR---EIHRWIAALELESDLVVGTLLVNMYGSCGSTDDARSSFA 140
Query: 148 KIFLDHLEGTPRIFFDKMISIY----YNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNA 203
KI L+G ++ M+ Y ++R H + F +M +LGV P+ + + N+
Sbjct: 141 KI---KLKGVSLAAWNSMLGAYAQTGHDRHRHNQALLFFTEMAQLGVDPDGTTFVCLLNS 197
Query: 204 FQKLGMLDK 212
G+L +
Sbjct: 198 LTHSGLLAR 206
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M+ G ++ TY ++L L + DEA L K+F +++ I F+ +IS + G
Sbjct: 497 MIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVK-FDIITFNIVISAMFKVG 555
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMM 200
++ E+F + G+ PN+ SMM
Sbjct: 556 RRQEAKELFDAISTYGLVPNIQTYSMM 582
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY +L++AL ++GR DEA++ ++ + + + +D I Y G ++ D
Sbjct: 516 TYSILISALCKEGRFDEAKKKLLEMIVKDIS-PDSVIYDTFIHGYCKHGKTSLAIKVLRD 574
Query: 185 MEELGVRPNVSIVSMMGNAFQK 206
ME+ G P+ +++ F++
Sbjct: 575 MEKKGCNPSTRTYNLLIRGFEE 596
>gi|449530353|ref|XP_004172160.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like, partial [Cucumis sativus]
Length = 312
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
T+ L+NALA +G ++AEE++ ++ E P ++ ++ ++ Y G EIF+
Sbjct: 33 TFTALVNALAREGLCEKAEEIFEQMQEAGYE--PDVYAYNALMESYSRAGFPYGAAEIFS 90
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGM 209
M+ +G P+ + ++M +A+ + G+
Sbjct: 91 LMQHMGCEPDRASYNIMVDAYGRAGL 116
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMIS 167
+V + M +G + TY L+N L +G+LDEA L K + + P + ++ +I+
Sbjct: 320 KVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDK--MSGMGLKPNVVTYNALIN 377
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
+ + M ++ E+ D+ + G+ PNV + + +A+ K G +D
Sbjct: 378 GFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMD 421
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFF 162
DW+ + + M KG + TY +L+ AL G + +A +L ++ + LE + +
Sbjct: 413 DWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPV-HLTY 471
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKY-----EKLK 217
+ +I+ Y +G + +EI ME+ R NV ++ ++G +++ E L+
Sbjct: 472 NTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLE 531
Query: 218 KKYPPPKWEYRYIK 231
K P Y IK
Sbjct: 532 KGLVPNGVTYDTIK 545
>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
Length = 735
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEG----TPRIFFDKMISIYYNRGMHEKMFE 180
TY +L++ LA+ G DEA FL EG + + + + G + E
Sbjct: 303 TYNMLIHGLAKHGHADEALS-----FLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKE 357
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
I +M G RP+V S + + F ++G LD+ K+ K
Sbjct: 358 IIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMK 395
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
T+ LL+ AL + +D A EL+ + + P F F ++ Y G+ +K E+
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDE--MPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLN 206
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
ME GV PN I + + ++F + G D EK+ +K
Sbjct: 207 AMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEK 242
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 16/117 (13%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT---PRIF-FDKMISIYYNRGMHEKMFE 180
TY L++ ++ G L +A K+ L ++ P + + +I+ Y GM+E+
Sbjct: 403 TYNTLIDGQSKFGSLKQA-----KLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAES 457
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKKK---YPPPKWEYRYI 230
+F +M G P++ + + +AF K GM+ K Y++LK K P YR +
Sbjct: 458 LFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRIL 514
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168
+V M+ +G + TY L++ L +D RLD ++ +K+ L++ + + +MI
Sbjct: 701 EVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM-LENSCAPNIVIYTEMIDG 759
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
++ +++ MEE G +PNV + M + F K G +DK +L
Sbjct: 760 LSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLEL 807
>gi|297826989|ref|XP_002881377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327216|gb|EFH57636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 589
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 53/117 (45%), Gaps = 22/117 (18%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKI---------------------FLDHLEGTP-RIFF 162
TY L+NA A +G ++AEE++ ++ + H+ P R +
Sbjct: 311 TYTALVNAFAREGLCEKAEEIFEQLQEDGHIDSRAGYPYGAAEIFSLMQHMGCEPDRASY 370
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+ M+ Y G+H +F +M+ LG+ P + ++ +A+ + + K E + K+
Sbjct: 371 NIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSRARDVTKCEAIVKE 427
>gi|356544457|ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 711
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M +G ++ TY LL+A G ++W + +EGT R+ F+ ++ + G
Sbjct: 506 MQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRRYKVEGT-RVTFNTLVDGFAKHG 564
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+++ ++ + +G+ P V +M+ NA+ + G K +L
Sbjct: 565 HYKEARDVISKFANVGLHPTVMTYNMLMNAYARGGQHSKLPEL 607
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 125 TYFLLLNALAEDGRL-DEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFA 183
+Y L++A + + D A + + K+ D ++ T + +I Y G HEK + F
Sbjct: 446 SYTCLISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSY-TALIHAYSVSGWHEKAYAAFE 504
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLG---MLDKYEKLKKKY 220
+M+ G++P++ + + +AF++ G L K KL ++Y
Sbjct: 505 NMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRRY 544
>gi|302801049|ref|XP_002982281.1| hypothetical protein SELMODRAFT_116350 [Selaginella moellendorffii]
gi|300149873|gb|EFJ16526.1| hypothetical protein SELMODRAFT_116350 [Selaginella moellendorffii]
Length = 515
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
L+ + A G ++A ++ ++ D +E + F M+S + G+ E+ E FA M EL
Sbjct: 352 LIASYARHGHGEQALWIFRRLRQDGIE-LSNLTFVAMLSACSHVGLIEEGCEFFASMAEL 410
Query: 189 GVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYP 221
G+ PN+ S + + + G L E+ + P
Sbjct: 411 GIEPNMEHYSCLVDLLARAGHLHTAEEFLSRMP 443
>gi|449502417|ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Cucumis sativus]
Length = 499
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
+Y +L+ L E+ R EAEELW ++ + LE P + ++ +I + G + E +
Sbjct: 293 SYSILMTVLCEEKRTGEAEELWEEMKMKKLE--PDVVAYNTIIGGFCKAGHTHRAEEFYR 350
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKKK 219
+ME G+ S + + N + G +D Y+ +++K
Sbjct: 351 EMELSGIESTFSTLEHLINGYCDTGDVDSALLVYKDMRRK 390
>gi|449455312|ref|XP_004145397.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Cucumis sativus]
gi|449472579|ref|XP_004153637.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Cucumis sativus]
Length = 499
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
+Y +L+ L E+ R EAEELW ++ + LE P + ++ +I + G + E +
Sbjct: 293 SYSILMTVLCEEKRTGEAEELWEEMKMKKLE--PDVVAYNTIIGGFCKAGHTHRAEEFYR 350
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKKK 219
+ME G+ S + + N + G +D Y+ +++K
Sbjct: 351 EMELSGIESTFSTLEHLINGYCDTGDVDSALLVYKDMRRK 390
>gi|357123530|ref|XP_003563463.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Brachypodium distachyon]
Length = 862
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167
+ V + M + G T TY +LL+ GR D EL+ ++ T ++ + S
Sbjct: 335 VAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRELFREMRTAVPPDTAT--YNVLFS 392
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNV 194
++ + G +++ E+F DM G+ P++
Sbjct: 393 VFGDGGFFKEVVELFHDMLRTGIEPDM 419
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 56/116 (48%), Gaps = 15/116 (12%)
Query: 110 VTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP---RIFFDKMI 166
+ K +L G + TY +++N +LD+ EE W ++F+ +E + F+ +I
Sbjct: 230 LMKEILKAGYEPNVFTYSIIINCYC---KLDKVEEAW-EVFMKMIESNCVPNAVTFNTLI 285
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNV--------SIVSMMGNAFQKLGMLDKYE 214
+ + GM E ++FA+ME++G + + S+ G + + + +K E
Sbjct: 286 AGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLE 341
>gi|302810635|ref|XP_002987008.1| hypothetical protein SELMODRAFT_182822 [Selaginella moellendorffii]
gi|300145173|gb|EFJ11851.1| hypothetical protein SELMODRAFT_182822 [Selaginella moellendorffii]
Length = 694
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
++N + GRLDEA E + D + + ++ MI+ Y G + ++FA ME+
Sbjct: 190 IVNFYGKCGRLDEAREAF-----DRMPAKNNVTWNGMIAAYVQSGAATQAMDLFATMEDE 244
Query: 189 GVRPNVSIVSMMGNAFQKL 207
GV P+ VS + A L
Sbjct: 245 GVVPDAMAVSSILGACSGL 263
>gi|328772064|gb|EGF82103.1| hypothetical protein BATDEDRAFT_10309, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 286
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEE 187
+++ LA++G+ AE + +F+ E P F+ +I ++ +G HE F + +M +
Sbjct: 135 IISGLAKNGKF--AEMIKVLVFMQEKEFLPNTATFNIIIDLFAKQGDHENAFAMLDEMIK 192
Query: 188 LGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
GV+PNV + + A+ + GML + + +
Sbjct: 193 RGVQPNVVSYNTVLGAYGRAGMLSQAQDI 221
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 118 GQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI-FFDKMISIYYNRGMHE 176
GQ ++ TY +LL+ L ++G ++EA +++ L ++ P I + +I + E
Sbjct: 319 GQSPSLDTYTVLLDGLCKNGCIEEAIDVFRS--LKSIKYKPSIRIYSILIGGMFQARRWE 376
Query: 177 KMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
EIF ++ +G+ PN+ ++M N K G L + E+L
Sbjct: 377 SAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERL 416
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 60/118 (50%), Gaps = 17/118 (14%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
+ +K R + +++ + GR+++A ++ D +E + + MIS Y
Sbjct: 5 LFTKISSRNLVVLTAMISGYSRVGRVEDA-----RLIFDQMEEKDLVCWSAMISGYAESD 59
Query: 174 MHEKMFEIFADMEELGVRPN-VSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYI 230
++ +F++M+ G++P+ V+I+S++ +A +LG+LD+ KW + Y+
Sbjct: 60 KPQEALNLFSEMQVFGIKPDQVTILSVI-SACARLGVLDR----------AKWIHMYV 106
>gi|222623336|gb|EEE57468.1| hypothetical protein OsJ_07708 [Oryza sativa Japonica Group]
Length = 335
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
L+N L G + A + KI L+H I + K+ISIY G +K F DM +
Sbjct: 95 LINDLCRVGNVQGASNV-CKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQR 153
Query: 189 GVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
G+ +V + +++ N + K G L + +L
Sbjct: 154 GLSIDVIVYTILMNGYCKAGRLQEACQL 181
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167
+++ + M KG T+ TY L+ L + GR+D+A L+ + D + + + +I+
Sbjct: 285 LRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCK-PDVVLINNLIN 343
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNV 194
I G E ++F M+ L PNV
Sbjct: 344 ILGRAGRLEDALKLFGKMDSLQCAPNV 370
>gi|357131918|ref|XP_003567580.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 545
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLE-GTPRIFFDKMISIYYNRGMHEKMFEIFA 183
TY LLN + ++A +L+ K +D L + + F+ ++S+Y G H+K+ +F
Sbjct: 182 TYGALLNCYCSSKKEEKATDLFHK--MDDLGIASSTLPFNNLMSLYMKLGQHKKVAGLFE 239
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
+M+ V+P+ ++ ++ L +D E++ K
Sbjct: 240 EMKAKNVKPDNLTCCVLMTSYAALNKIDAVEEVLK 274
>gi|449463623|ref|XP_004149531.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Cucumis sativus]
Length = 580
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNR 172
ML G T Y +LL+A A G +++A+ ++ + D +P I + M+S Y N
Sbjct: 339 MLDAGIRPTHKAYNILLDAFAISGMVEQAKIVFKSMKRDRC--SPDICSYTTMLSAYVNA 396
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG----MLDKYEKLK 217
E F +++ G RPNV + + K+ M+ +YE++K
Sbjct: 397 SDMEGAENFFRRLKQDGFRPNVVTYGTLIKGYAKINNLEKMIKRYEEMK 445
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 64/150 (42%), Gaps = 5/150 (3%)
Query: 62 IKGLSNVK--EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQ 119
I GL + E LD EL+ ++ + E + ++ K M++ G
Sbjct: 321 INGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGV 380
Query: 120 GRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD-HLEGTPRIFFDKMISIYYNRGMHEKM 178
TY L+ L + G++D A L ++ D H T I ++ +I ++ +
Sbjct: 381 QPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT--ITYNLIIEGHFRHHSKKDA 438
Query: 179 FEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
F + ++ME G+ PNV S+M + + G
Sbjct: 439 FRLLSEMENAGISPNVYTYSIMIHGLCQSG 468
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 4/133 (3%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMG-TYFLLLNALAEDGRLDEAEELW 146
LIT + L K I++ + M+SK Q TY L+N ++D A ++
Sbjct: 236 LITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIM 295
Query: 147 TKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQ 205
F+ P +F + +++ + G E+ E+F +M+ LG++P+ + + N F
Sbjct: 296 E--FMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFC 353
Query: 206 KLGMLDKYEKLKK 218
+ G +D+ +L K
Sbjct: 354 RAGRVDEAMELLK 366
>gi|356495784|ref|XP_003516753.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 558
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 100 NEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDH-LEGTP 158
+E+D++++ QV + M G TY ++ L + G+L +A E++ K+ D + TP
Sbjct: 312 HERDFRKVDQVLEEMRENGCPPNAVTYTSVMLHLGKAGQLRKALEVYEKMKSDGCVADTP 371
Query: 159 RIFFDKMISIYYNRGMHEKMFEIFADMEELG-VRPNVSIVSMMGNA 203
F+ MI I G + ++F DM + G VR V+ SM+ A
Sbjct: 372 --FYSSMIFILGKAGRLKDACDVFEDMPKQGVVRDVVTYNSMISTA 415
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 1/129 (0%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
++T + L E D ++ M G + TY ++N L + G ++EA +L
Sbjct: 879 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 938
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
+ L + + ++ Y G +K EI +M G++P + +++ N F
Sbjct: 939 EFEAAGLNAD-TVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLH 997
Query: 208 GMLDKYEKL 216
GML+ EKL
Sbjct: 998 GMLEDGEKL 1006
>gi|218200036|gb|EEC82463.1| hypothetical protein OsI_26904 [Oryza sativa Indica Group]
Length = 346
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
++ L ++ + + + + M S G + TY L+ L + +D+A EL ++ +
Sbjct: 122 MRALCADRRADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGI 181
Query: 155 EGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
E + + ++ Y G E + ++F +M E G+ P+V + + + ++ K+G
Sbjct: 182 EPNV-VVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVG 234
>gi|125549696|gb|EAY95518.1| hypothetical protein OsI_17364 [Oryza sativa Indica Group]
Length = 847
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 117 KGQGR-TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMH 175
+G GR + G Y +L++ LA+ GRLD A ++ ++ +P + M+ G
Sbjct: 339 EGIGRASAGMYGVLVDVLAKAGRLDAAMGMYREMVAVGHRASPAV-STAMVEGLVRAGKL 397
Query: 176 EKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ E++ +M G+RP+ + +M+ A + G LD +L
Sbjct: 398 DAGMELWEEMRRGGLRPSFGLYTMVVEANARSGRLDVATQL 438
>gi|255556157|ref|XP_002519113.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541776|gb|EEF43324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 486
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 64/121 (52%), Gaps = 12/121 (9%)
Query: 100 NEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR 159
N+ + KR+I+V + T+ L+ DG L+ EE+W++ ++ E P
Sbjct: 225 NDNEGKRVIKVRP---------NVHTFNELMMGFYRDGELEMVEEVWSE--MERFECVPN 273
Query: 160 IF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
F + +++++ + G +++ +++ +M G++ +V + + F K+G ++K E+L +
Sbjct: 274 GFSYSVLMTVFLDVGRTKEIEKLWEEMRAKGIKGDVVAYNTVIGGFCKIGEIEKAEELSR 333
Query: 219 K 219
+
Sbjct: 334 E 334
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 10/128 (7%)
Query: 104 WKRIIQVTKW---MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP-R 159
W +++ K M++KG + +Y +L+N + R+DEA +L+ ++ H TP
Sbjct: 351 WTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMI--HQGLTPNN 408
Query: 160 IFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEK 215
+ ++ +I + G + ++F +M G P++ S++ + F K G L K +
Sbjct: 409 VSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRA 468
Query: 216 LKKKYPPP 223
++ Y P
Sbjct: 469 MQSTYLKP 476
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167
+++ + M KG T+ TY L+ L + GR+D+A L+ + D + + + +I+
Sbjct: 285 LRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCK-PDVVLINNLIN 343
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNV 194
I G E ++F M+ L PNV
Sbjct: 344 ILGRAGRLEDALKLFGKMDSLQCAPNV 370
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 110 VTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISI 168
V K M+S G + TY +LL+ L +G+++ A ++ +L + P I+ ++ MI
Sbjct: 453 VFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFE--YLQRSKMEPDIYTYNIMIEG 510
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK----YEKLKKKYPPP 223
G E +++F + GV+PNV + M + F + G+ ++ + ++K++ P P
Sbjct: 511 MCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLP 569
>gi|302819880|ref|XP_002991609.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
gi|300140642|gb|EFJ07363.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
Length = 356
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 116 SKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGM 174
S+G T+ +Y +++ A ++G +D+ EE+ ++ L P +F F+ +I+ Y
Sbjct: 91 SRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELR--PDLFSFNALIAAYAMSRK 148
Query: 175 HEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGM 209
E+ ++F++M+ GV P++ + + F + M
Sbjct: 149 PERGLQVFSNMKAAGVLPDIVTYTTLIQMFSRSSM 183
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168
+V + M+ KG + +Y +L+N R+D+A+ L T++ + L + M +
Sbjct: 499 KVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGL 558
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWE 226
Y + + E+F M G+ P + S++ N K G LD+ KL K K E
Sbjct: 559 CYVGRLLDAQ-ELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLE 615
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168
++ K M S G T+ TY +LLN L + G LDEA +L+ + LE I + +I
Sbjct: 569 ELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLE-PDIILYTILIEG 627
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK-YEKLKK 218
+ G E +F+ + G++P ++M K G+ D+ YE +K
Sbjct: 628 MFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRK 678
>gi|218191262|gb|EEC73689.1| hypothetical protein OsI_08260 [Oryza sativa Indica Group]
Length = 595
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
L+N L G + A + KI L+H I + K+ISIY G +K F DM +
Sbjct: 286 LINDLCRVGNVQGASNV-CKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQR 344
Query: 189 GVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
G+ +V + +++ N + K G L + +L
Sbjct: 345 GLSIDVIVYTILMNGYCKAGRLQEACQL 372
>gi|190344646|gb|EDK36363.2| hypothetical protein PGUG_00461 [Meyerozyma guilliermondii ATCC
6260]
Length = 341
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 36 RPRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKAL 95
RP + R+RI + A IK +S+V V+ +D A E+ F T++K +
Sbjct: 214 RPSTLSEYSPRRRIIIATDVASSSVQIKQISDVLSGVFNLVDKLAAKEITFKSETLRKVV 273
Query: 96 KTLENE-KDWKRI 107
KT ENE WKRI
Sbjct: 274 KTRENELAKWKRI 286
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 70 EEVYGALDSFIAWELEFPLITVKKALKTL----ENEKDWKRIIQVTKWMLSKGQGRTMGT 125
EE + L +A ++ ++T + E EK +R+I ++ K RT G
Sbjct: 218 EEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKA-ERLILKMQYNKVKPNERTCG- 275
Query: 126 YFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADM 185
++++ ++G + EA ++ + P + F+ +I Y + + E M
Sbjct: 276 --IIISGYCKEGNMTEALRFLYRMKELGVHPNP-VVFNSLIKGYLDATDTNGVDEALTLM 332
Query: 186 EELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
EE G++P+V S + NA+ G++D E++
Sbjct: 333 EEFGIKPDVVTFSTIMNAWSSAGLMDNCEEI 363
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 3/136 (2%)
Query: 60 TCIKGLSNVK--EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSK 117
T I GL + +E +D I L+ T L E D ++ + + M S
Sbjct: 389 TLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSN 448
Query: 118 GQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEK 177
G + TY L+ L + GR++ A L I L + TP ++ +I + R ++
Sbjct: 449 GCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHA-YNPVIQALFKRKRTKE 507
Query: 178 MFEIFADMEELGVRPN 193
+F +MEE G P+
Sbjct: 508 AMRLFREMEEKGNTPD 523
>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 938
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
+T + +L KD++ + + M+ +G + Y +L+ L + G L EAE+ + K
Sbjct: 295 VTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTF-K 353
Query: 149 IFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+ L+ E + + ++ G I M E V PNV S M N + K G
Sbjct: 354 MLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKG 413
Query: 209 MLDKYEKLKKK 219
ML++ L +K
Sbjct: 414 MLEEAVSLMRK 424
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168
++ + M+S G + TY ++++ L + GR+DEA + ++ + TP I + ++
Sbjct: 180 EIFREMVSNGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFI-YSVLVHT 238
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML 210
Y E F +ME G+ P+V++ + + AF K L
Sbjct: 239 YGIENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRL 280
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 84 LEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAE 143
LE +I+ ++ EKD++ + +V M KG + T+ ++++AL + +++EA
Sbjct: 342 LEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEAL 401
Query: 144 ELWTKIFLDHLEGT--PRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNV 194
+++ K+ EG F+ +I I G + EI DME+ GV P+V
Sbjct: 402 KVYEKM---KKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDV 451
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 2/132 (1%)
Query: 86 FPLITVKKAL-KTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEE 144
FP IT L + K + V + M G TY +LLN GR D+ +
Sbjct: 319 FPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRD 378
Query: 145 LWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
L+ ++ + + E ++ +I+++ G +++ +F DM E V PN+ + A
Sbjct: 379 LFLEMKVSNTEPNAAT-YNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFAC 437
Query: 205 QKLGMLDKYEKL 216
K G+ + +K+
Sbjct: 438 GKGGLHEDAKKI 449
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 84 LEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAE 143
LE +I+ ++ EKD++ + +V M KG + T+ ++++AL + +++EA
Sbjct: 365 LEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEAL 424
Query: 144 ELWTKIFLDHLEGT--PRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNV 194
+++ K+ EG F+ +I I G + EI DME+ GV P+V
Sbjct: 425 KVYEKM---KKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDV 474
>gi|242043154|ref|XP_002459448.1| hypothetical protein SORBIDRAFT_02g004810 [Sorghum bicolor]
gi|241922825|gb|EER95969.1| hypothetical protein SORBIDRAFT_02g004810 [Sorghum bicolor]
Length = 316
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
TY +++ L + GRLD+A + ++ D L +P I F +I + G EK E+F
Sbjct: 117 TYTTVIDGLCKIGRLDDAMSRFCQMIDDGL--SPNIITFTTLIHGFSMYGKWEKAEELFY 174
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYP 221
+M + G+ PNV+ + M + K G + + KL P
Sbjct: 175 EMMDRGIPPNVNTFNSMIDRLFKEGKVTEARKLFDLMP 212
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFF 162
D + + V M G+ TY L +AL + GRLDEA EL K+ L+ TP + +
Sbjct: 601 DMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTP-VTY 659
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+I Y G + M + M L +P ++ + + G L++ EKL K
Sbjct: 660 RSVIHRYSQWGRVDDMLNLLEKM--LKRQPFRTVYNQVIEKLCDFGNLEEAEKLLGK 714
>gi|242096916|ref|XP_002438948.1| hypothetical protein SORBIDRAFT_10g028800 [Sorghum bicolor]
gi|241917171|gb|EER90315.1| hypothetical protein SORBIDRAFT_10g028800 [Sorghum bicolor]
Length = 678
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 9/127 (7%)
Query: 86 FPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEEL 145
PL ++ L + V + + +G Y LL A+ G + +
Sbjct: 120 LPLQVYTCVIRGLGKDNRPDAAFAVVEHLKRRGAVLNQFVYNCLLGAVKSCGEFGRIQAV 179
Query: 146 WTKIFLDHLEG---TPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMG 201
LD +E +P I ++ ++SIY ++G E + ++AD++E G+ P + S +
Sbjct: 180 -----LDDMEAQGVSPNIVTYNTLMSIYVHQGRVEDVLRVYADVQERGLVPTAATYSTVM 234
Query: 202 NAFQKLG 208
A++K G
Sbjct: 235 CAYKKAG 241
>gi|255661142|gb|ACU25740.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 426
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI ++ + + E+F M LG
Sbjct: 327 IHILAGAGRIEEATWVFRQA-IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLG 385
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL DK
Sbjct: 386 YFPDSNVIALILNAYGKLHEFDK 408
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
TY ++N L + RLDEA +++ + +P I F+ +I+ Y GM + E+F
Sbjct: 340 TYSSMINGLCKQSRLDEATQMFDS--MGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFC 397
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLG 208
+M G+ N + F+K+G
Sbjct: 398 EMGRRGIVANAITYITLIRGFRKVG 422
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEE- 187
+++ A G+ +EA +L+ + LD + F ++S + G+ E+ F+ F M +
Sbjct: 411 MISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDS 470
Query: 188 LGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYP--PPKWEYRYIKGKRVR 236
G+ P + S M + + G LDK E K P P +R + G R
Sbjct: 471 YGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCR 521
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M S+G T+ ++++AL + L++A +L+ ++ TP + +I G
Sbjct: 857 MRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTY-GPLIDGLLKAG 915
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
E+ +IF +M + G PN I +++ N F K G +D +L KK
Sbjct: 916 RSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKK 961
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTP--RIFFDKMISIYYNRGMHEKMFEIFADMEE 187
L LAE GR+ EAE+++ + H G + ++ ++ Y G +K ++ ++M
Sbjct: 487 LYTLAETGRISEAEDIFNDL---HKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMIS 543
Query: 188 LGVRPNVSIVSMMGNAFQKLGMLD 211
G P+V I++ + N K G +D
Sbjct: 544 KGCEPDVMIINSLINTLYKAGRVD 567
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 110 VTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIY 169
+ K M +G G + TY +L++AL G+LD+A+EL+ K+ R+ + ++ +
Sbjct: 292 IFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASS-HSPDRVTYITLMDKF 350
Query: 170 YNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
G E + + +ME G P+V +++ A K G +D+
Sbjct: 351 GKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDR 393
>gi|224087130|ref|XP_002308078.1| predicted protein [Populus trichocarpa]
gi|222854054|gb|EEE91601.1| predicted protein [Populus trichocarpa]
Length = 373
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
Y +L+N + G D A ++ ++ D ++ P +F F+ +IS Y M E E+F
Sbjct: 77 VYNILINGCVKCGEHDRAIGVYDRMLKDRVK--PDVFTFNILISSYCRNYMFELALELFR 134
Query: 184 DMEELGVRPNV 194
+M+E G PNV
Sbjct: 135 EMKEKGCSPNV 145
>gi|50287221|ref|XP_446040.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525347|emb|CAG58964.1| unnamed protein product [Candida glabrata]
Length = 952
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/118 (20%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L L DW + + G+ ++ Y +++ ALA G L+ ++L+ ++ L
Sbjct: 306 LIALSKTYDWSALQDQFNALFGIGKLPSIEQYGIVMAALATQGELESVDQLYQQLLRRGL 365
Query: 155 EGTPRIFFDK-MISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
P + ++ +++ G + FE F ++ G+ P++ ++M N ++K+ +D
Sbjct: 366 --IPNFMVIRALLEVHFRSGDYRGCFEHFELFDKYGISPSMGTYTVMFNVYKKINDID 421
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
TY ++N L + RLDEA +++ + +P I F+ +I+ Y GM + E+F
Sbjct: 340 TYSSMINGLCKQSRLDEATQMFDS--MGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFC 397
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLG 208
+M G+ N + F+K+G
Sbjct: 398 EMGRRGIVANAITYITLIRGFRKVG 422
>gi|357444861|ref|XP_003592708.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355481756|gb|AES62959.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 1430
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI-FFDKMISIYYNRGMHEKMFEIFA 183
T+ +L++ ++ R+D+A +L+ K+ + TP + +D +I ++ +F+
Sbjct: 267 TFCVLIHGFVKESRVDKALQLFDKMRRED-SFTPDVSLYDVLIGGLCKNKDTDRAISLFS 325
Query: 184 DMEELGVRPNVSIVSMMGNAF 204
+M+E GVRP++ I++ + + F
Sbjct: 326 EMKEFGVRPDIGILTKLISCF 346
>gi|219363731|ref|NP_001136745.1| hypothetical protein [Zea mays]
gi|194696880|gb|ACF82524.1| unknown [Zea mays]
gi|414875980|tpg|DAA53111.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
Length = 421
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 9/153 (5%)
Query: 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161
+DW+ + + M KG + TY +L+ AL G + +A +L ++ LE +
Sbjct: 262 RDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLE-PKHVA 320
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKY-----EKL 216
++ +I+ + +G + EI ME+ R NV ++ F K+G +D+ E L
Sbjct: 321 YNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEML 380
Query: 217 KKKYPPPKWEYRYIKGKRVR---IPAKPKYELD 246
+K P + Y I + +P Y D
Sbjct: 381 EKGLVPNRITYEIINSGMIEKGYVPDISGYAAD 413
>gi|2980784|emb|CAA18211.1| puative protein [Arabidopsis thaliana]
gi|7269983|emb|CAB79800.1| puative protein [Arabidopsis thaliana]
Length = 1075
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 6/115 (5%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMG---TYFLLLNALAEDGRLDEAEELWTKIFL 151
LK LE+ D I+ WM + G+ +G Y L+L L D AE+L ++
Sbjct: 317 LKRLESCSD-TNAIKFFDWM--RCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCG 373
Query: 152 DHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
H F+ +I +G + + F M E GVRPNV+ + M+ +QK
Sbjct: 374 FHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQK 428
>gi|255086920|ref|XP_002505383.1| predicted protein [Micromonas sp. RCC299]
gi|226520653|gb|ACO66641.1| predicted protein [Micromonas sp. RCC299]
Length = 175
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
Query: 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148
IT + K W++ + V + M + G + TY L++A A+ +LD+A E++ +
Sbjct: 34 ITCSALINACGKSKQWEKALDVFREMKADGVEANIFTYSALISACAKGRQLDKALEVFRE 93
Query: 149 IFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNV----SIVSMMGNAF 204
+ +E I + +I+ ++ +IF M V NV S++S A
Sbjct: 94 CQVSGVE-PDAITYGTVIAACEKGKRCDEALDIFRQMRAKNVDANVITYNSVLSACDRAG 152
Query: 205 QKLGMLDKYEKLKKKYPPP 223
+ LD + +++K+ P
Sbjct: 153 RADDALDIFAQMRKEGVKP 171
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 61/149 (40%), Gaps = 3/149 (2%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
L T + L + +++V ML + Y +++ L + G+ DEA +L
Sbjct: 686 LYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLML 745
Query: 148 KIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
K ++ P + + MI + G E+ E+F DM G PN ++ N
Sbjct: 746 K--MEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCS 803
Query: 207 LGMLDKYEKLKKKYPPPKWEYRYIKGKRV 235
G+LD+ KL + W + +++
Sbjct: 804 NGLLDEAYKLLDEMKQTYWPKHILSHRKI 832
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 119 QGRTMG------TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYN 171
Q R MG TY L++ + G L+E L+ + + + P I ++ +I+ Y
Sbjct: 255 QMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNE--MKDVGCVPDIITYNGLINCYCK 312
Query: 172 RGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ FE F++M+ G++PNV S + +AF K GM+ KL
Sbjct: 313 FEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKL 357
>gi|255661134|gb|ACU25736.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
gi|255661138|gb|ACU25738.1| pentatricopeptide repeat-containing protein [Verbena halei]
gi|255661140|gb|ACU25739.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 426
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI ++ + + E+F M LG
Sbjct: 327 IHILAGAGRIEEATWVFRQA-IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLG 385
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL DK
Sbjct: 386 YFPDSNVIALILNAYGKLHEFDK 408
>gi|449438490|ref|XP_004137021.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 334
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
++ M+++Y + G HEK+ E+ +MEE+G+ P+ ++ NA+ + EKL K
Sbjct: 16 YNAMLNLYAHLGKHEKLAELLKEMEEMGIGPDRFTYNIRMNAYAAASDITNMEKLLSK 73
>gi|255661130|gb|ACU25734.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 426
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI ++ + + E+F M LG
Sbjct: 327 IHILAGAGRIEEATWVFRQA-IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLG 385
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL DK
Sbjct: 386 YFPDSNVIALILNAYGKLHEFDK 408
>gi|224144700|ref|XP_002325381.1| predicted protein [Populus trichocarpa]
gi|222862256|gb|EEE99762.1| predicted protein [Populus trichocarpa]
Length = 1071
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 102/248 (41%), Gaps = 45/248 (18%)
Query: 23 NARSLVVCAAR---------GPRPRYPRVWKAR-----------KRIGT-----ISKSAK 57
NAR +++ AR GP+ + P+ W R R G + + K
Sbjct: 68 NARRMIIARARYLSLLRKHQGPQAQTPK-WIKRTPEQMVMYLEDDRNGHLYGKHVVAAIK 126
Query: 58 LVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWM-LS 116
V + G N + ++ + F+ +L F + V L+ +K W+ WM L
Sbjct: 127 RVRGLAGKKNEERDMRLLMSGFVG-KLSFREMCV-----VLKEQKGWREARDFFSWMKLQ 180
Query: 117 KGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLE-GT--PRIFFDKMISIYYNRG 173
++ Y +LL + G++ AE+ FL+ LE G + M+ Y G
Sbjct: 181 LSYHPSVIVYTILLRIYGQVGKIKLAEQ----TFLEMLEVGCEPDEVACGTMLCSYARWG 236
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKY-----EKLKKKYPPPKWEYR 228
H+ MF ++ ++E G+ ++++ + M ++ QK + K + + K+ P + Y
Sbjct: 237 HHKAMFSFYSAIKERGIVVSIAVYNFMLSSLQKKSLHGKVIVLWRQMVDKRVAPNNFTYT 296
Query: 229 YIKGKRVR 236
+ V+
Sbjct: 297 VVISSLVK 304
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY L +AL + GRLDEA EL K+ L+ TP + F +I Y G + M +
Sbjct: 619 TYTALFDALGKKGRLDEAAELIVKMLSKGLDPTP-VTFRSVIHRYCQWGRVDDMLNLLDR 677
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
M + +P +I + + G L++ EKL K
Sbjct: 678 M--VKRKPFRTIYNHVIEKLCDFGNLEEAEKLLGK 710
>gi|358248622|ref|NP_001240168.1| uncharacterized protein LOC100781412 [Glycine max]
gi|255642193|gb|ACU21361.1| unknown [Glycine max]
Length = 246
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 18/200 (9%)
Query: 23 NARSLVVCAARGPRPRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAW 82
N R +++C R +KAR+R +SK + V L+ + V A S +
Sbjct: 32 NRRQVIICGLRSS-------YKARRRTRILSKESIEVIHALKLARSPDHVLNAKLSRLLK 84
Query: 83 ELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSK-GQGRTMGTYFLLLNALAEDGRLDE 141
L L L+ + ++V ++ + G + Y ++ L + R+D
Sbjct: 85 PDALNL------LDELQRQNQLHLSLKVFHFIREELGHDTLLQLYADMILLLGRNKRIDM 138
Query: 142 AEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEE---LGVRPNVSIVS 198
AEEL+++ L+ R+ +MI Y GM +K +I+A M+E P+ +
Sbjct: 139 AEELFSEALEKGLKPDTRLC-SEMIGAYLQLGMADKAMQIYASMKEDWACSSSPDKFTFT 197
Query: 199 MMGNAFQKLGMLDKYEKLKK 218
++ QK G + E LK+
Sbjct: 198 ILIRYLQKNGQHELAETLKQ 217
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167
+Q+ M+ KG Y LL+ + G L +A L K+ L+ + IS
Sbjct: 558 VQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQ-LDLFCYTCFIS 616
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEY 227
+ N M + E+F++M G+ P+ ++ + + + +QKLG L++ L+ +
Sbjct: 617 GFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM------- 669
Query: 228 RYIKGKRVRIPAKPKYELDSATEGKT 253
+RV +P+ + D+AT+GKT
Sbjct: 670 -----ERV-LPSCT--DSDTATDGKT 687
>gi|359495626|ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic [Vitis vinifera]
Length = 701
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY +++A G +D A +L+ + + P + F +I IY G + ++ +
Sbjct: 248 TYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDP-VTFSTLIRIYGMSGNFDGCLNVYEE 306
Query: 185 MEELGVRPNV----SIVSMMGNAFQKLGMLDKYEKLKKKYPPPKW 225
M+ LGV+PN+ +++ MG A + + Y+++ P W
Sbjct: 307 MKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSW 351
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167
+++ M+ +GQ +M Y L+ ALA+ R+D A L+ ++ R+ F ++I
Sbjct: 100 LKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGG-HHPDRLMFYELIL 158
Query: 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
G + E F M + G +PNV + +++ + G L++ L
Sbjct: 159 GLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTL 207
>gi|255661146|gb|ACU25742.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 426
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI ++ + + E+F M LG
Sbjct: 327 IHILAGAGRIEEATWVFRQA-IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFNKMRGLG 385
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL DK
Sbjct: 386 YFPDSNVIALVLNAYGKLHEFDK 408
>gi|414877902|tpg|DAA55033.1| TPA: hypothetical protein ZEAMMB73_057713 [Zea mays]
Length = 377
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 12/74 (16%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPR---IFFDKMISIYYNRGMHEKMFEIFADM 185
+L+A A GR+ +AE L+ G P + + M+S Y G HE+ F DM
Sbjct: 1 MLSAYARGGRMGDAERLFA--------GMPDRSVVSWTAMVSGYAQNGRHEEAMHTFLDM 52
Query: 186 -EELGVRPNVSIVS 198
+ GVRPN VS
Sbjct: 53 WDGAGVRPNKLTVS 66
>gi|297791025|ref|XP_002863397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309232|gb|EFH39656.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 126 YFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFAD 184
Y LLN A+ G +EAE L+ + + ++ P F + M++IY + G EK ++F +
Sbjct: 399 YNTLLNMCADIGLEEEAERLFNDM-KESVQCKPDNFSYTAMLNIYGSGGKAEKAMKLFEE 457
Query: 185 MEELGVRPNV----SIVSMMGNA 203
M E GV+ NV +V +G A
Sbjct: 458 MLEAGVQVNVMGCTCLVQCLGKA 480
>gi|334185040|ref|NP_186914.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546752|sp|P0C896.1|PP209_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g02650, mitochondrial; Flags: Precursor
gi|332640323|gb|AEE73844.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 576
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFF 162
D +V K M S+G + TY ++++ A+ G +DEA+E+ + H + +P + +
Sbjct: 422 DLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSP-VTY 480
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPN 193
+I Y +++ ++ +M+ GV+PN
Sbjct: 481 HALIRGYCKIEEYDEALKLLNEMDRFGVQPN 511
>gi|15237467|ref|NP_199470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180372|sp|Q9LS25.1|PP420_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46580, chloroplastic; Flags: Precursor
gi|8885599|dbj|BAA97529.1| unnamed protein product [Arabidopsis thaliana]
gi|332008017|gb|AED95400.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 711
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 126 YFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFAD 184
Y LLN A+ G +EAE L+ + + ++ P F + M++IY + G EK E+F +
Sbjct: 399 YNTLLNMCADIGLEEEAERLFNDM-KESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEE 457
Query: 185 MEELGVRPNV----SIVSMMGNA 203
M + GV+ NV +V +G A
Sbjct: 458 MLKAGVQVNVMGCTCLVQCLGKA 480
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
E K+ +++ + M+ KG T+ TY L++AL+ G + E + L+ + P +
Sbjct: 302 EGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIR--PDL 359
Query: 161 F-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
F ++ +I+ + G ++ FEI +ME+ + P+ + + LG LD+ L
Sbjct: 360 FMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGL 416
>gi|326529783|dbj|BAK04838.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 105 KRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI-FFD 163
K ++ K M S+G ++ T +++ L + G++ EAEE++ ++ + P I +
Sbjct: 292 KETFRLLKVMRSQGVMPSLVTCSSVMDYLCKHGKIKEAEEMFYSRAVNGRK--PDIVLYS 349
Query: 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKY-----EKLKK 218
M+ Y G KM ++ M GV P++ +++ NA+ K GM+D + LK+
Sbjct: 350 IMLHGYAIEGSLVKMIDLCEVMARDGVVPDLPCFNILINAYAKYGMMDVAMLFFEDMLKQ 409
Query: 219 KYPPPKWEY 227
P ++ Y
Sbjct: 410 GVKPNEFTY 418
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI-FFDKMISIYYNR 172
M + GQ + TY +LL+ L ++G L+EA +L+ I E P I F ++
Sbjct: 382 MQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSI--KKTEHKPNIEVFSILLDGMCRA 439
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
G E+ ++ F ++ + G+ P+ +++ N GML + KL
Sbjct: 440 GKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKL 483
>gi|410110077|gb|AFV61118.1| pentatricopeptide repeat-containing protein 123, partial
[Coelocarpum swinglei]
Length = 440
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI ++ + + E+F M LG
Sbjct: 333 IHILAGAGRIEEATYVFRQA-IDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMYGLG 391
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL DK
Sbjct: 392 YFPDSNVIALVLNAYGKLHEFDK 414
>gi|326507840|dbj|BAJ86663.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 931
Score = 38.9 bits (89), Expect = 3.3, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI---FFDKMISIYYNRGMHEKMFEI 181
TY L++ ++GR+D+ + + K+ D E P+ FF++M G + ++
Sbjct: 423 TYTFLVDLCFKEGRVDDTMQYFYKM-ADGREHGPKFNIGFFNRMFEGLSQGGRIDDALKV 481
Query: 182 FADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ M + ++PN + ++ NA K G LD+
Sbjct: 482 YGRMADKEIKPNTTTFEILVNALCKEGELDR 512
>gi|115447573|ref|NP_001047566.1| Os02g0644600 [Oryza sativa Japonica Group]
gi|49387609|dbj|BAD25805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|49388661|dbj|BAD25796.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537097|dbj|BAF09480.1| Os02g0644600 [Oryza sativa Japonica Group]
Length = 526
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
L+N L G + A + KI L+H I + K+ISIY G +K F DM +
Sbjct: 286 LINDLCRVGNVQGASNV-CKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQR 344
Query: 189 GVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
G+ +V + +++ N + K G L + +L
Sbjct: 345 GLSIDVIVYTILMNGYCKAGRLQEACQL 372
>gi|255661190|gb|ACU25764.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 426
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI ++ + + E+F M LG
Sbjct: 327 IHILAGSGRIEEATWVFRQA-IDAGEVKDITVFERMIHLFSKYKKYSNVVEVFDKMRGLG 385
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++ +++ NA+ KL DK
Sbjct: 386 YFPDSNVTALVLNAYGKLHEFDK 408
>gi|281202518|gb|EFA76720.1| hypothetical protein PPL_09471 [Polysphondylium pallidum PN500]
Length = 695
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
L A A ++ E+++ +++ +H I + M+S+Y + EK ++F DM E G
Sbjct: 555 LKAYAFSNKITTTEKIFNEVYAEHKVEQDIISYSIMLSLYCHTRRFEKAQKLFQDMREKG 614
Query: 190 VRPNVSIVSMMGNAFQKLGMLDKYEKLKKK-----YPP 222
++P+ + ++ K+G + KL K+ +PP
Sbjct: 615 IKPDYKLYKILLFGTTKVGYANTCLKLAKEMVGFGFPP 652
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 110 VTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI-FFDKMISI 168
V + KG ++ T LL++L + L ++ E++ I L + P + F MI+
Sbjct: 208 VFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGI--IPDVHLFSTMINA 265
Query: 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+ + +F+ ME+LGV PNV + + + K G LD+ + K+K
Sbjct: 266 FCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEK 316
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 71/171 (41%), Gaps = 5/171 (2%)
Query: 41 RVWKARKRIGTISKSAKLVTCIKGL--SNVKEEVYGALDSFIAWELEFPLITVKKALKTL 98
R+W K+ G + I G +N EE L+ ++ +LE + ++
Sbjct: 592 RLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAY 651
Query: 99 ENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP 158
+ ++ M S+G + TY L++ L G +D+A+ L ++ + L P
Sbjct: 652 CINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGL--LP 709
Query: 159 RIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+ + +I Y G K+ + +M + PN ++M + F KLG
Sbjct: 710 NVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLG 760
>gi|414879860|tpg|DAA56991.1| TPA: hypothetical protein ZEAMMB73_837882 [Zea mays]
Length = 677
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 133 LAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP 192
LA GRL+EA L+ + ++ E M+ +Y H + E+F +M +LG P
Sbjct: 509 LASAGRLEEAAWLFRRA-VNTGEIKDSSVHRAMMDLYAKNRRHRNVIEVFDEMRKLGQLP 567
Query: 193 NVSIVSMMGNAFQKLGMLDKYEKL 216
+ I++ NA+ KL DK L
Sbjct: 568 DSEIIATAMNAYGKLKEFDKAAAL 591
>gi|255661144|gb|ACU25741.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 426
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI ++ + + E+F M LG
Sbjct: 327 IHILAGAGRIEEATWVFRQA-IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLG 385
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL DK
Sbjct: 386 YFPDSNVIALILNAYGKLHEFDK 408
>gi|255661132|gb|ACU25735.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 426
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI ++ + + E+F M LG
Sbjct: 327 IHILAGAGRIEEATWVFRQA-IDAGEVKDIXVFERMIHLFSKYKKYGNVVEVFDKMRGLG 385
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL DK
Sbjct: 386 YFPDSNVIALILNAYGKLHEFDK 408
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
+Y LLNA + G+ ++A +++ + +H + P + ++ +I Y ++G+ + EI
Sbjct: 411 SYTSLLNAYGKSGKPEKAMKVFELMRRNHCK--PNLVSYNALIDAYGSKGLLTEAVEILH 468
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIK 231
+ME GV+PN+ + + A + G +K+K K E R IK
Sbjct: 469 EMERNGVQPNIVSICTLLAACGRCG-----QKVKIKSVLSAAELRGIK 511
>gi|224136033|ref|XP_002327364.1| predicted protein [Populus trichocarpa]
gi|222835734|gb|EEE74169.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 6/184 (3%)
Query: 52 ISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVT 111
+ S V + G E++ + W L T K ++ ++ ++ V
Sbjct: 175 VRGSISTVNILIGFYENSEDLQKCIGLIKKWGLRMTGYTYKCLVQAYLRSRNTEKGFAVY 234
Query: 112 KWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYN 171
M KG + + +LL+AL +D +D A +++ + H E + MI +
Sbjct: 235 LEMKKKGHMLDIFAFNMLLDALVKDSEVDHAYKVFEDMKRKHCE-PDEYTYTIMIRMTGK 293
Query: 172 RGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK-----YEKLKKKYPPPKWE 226
G ++ E+F +M G PNV + M A M+DK + ++K+ P ++
Sbjct: 294 IGKPDESLELFEEMLNKGYSPNVIAYNTMIQALANARMVDKAILLFLKMVEKECRPSEFT 353
Query: 227 YRYI 230
Y I
Sbjct: 354 YSVI 357
>gi|387191507|gb|AFJ68617.1| pentatricopeptide repeat-containing protein, partial
[Nannochloropsis gaditana CCMP526]
Length = 646
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
LI L+ L+ +K+W++ +QV + M G + + +++A+AE G EA L
Sbjct: 406 LIAYNAVLEALKTDKEWRQALQVLQEMRRVGLVPNVVNHNTVMDAIAEAGEAGEALALLK 465
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNV----SIVSMMGNA 203
++ + + R + + ++ + + + E+F +M G+ P+ +++ + G A
Sbjct: 466 QMKVSRVPADKRTYTAAIKAMIKSADVLQGR-ELFEEMCAAGITPDAVTYTTLMELYGQA 524
Query: 204 FQKLGMLDKYEKLKKKYPPPK 224
K M + +++ +K P+
Sbjct: 525 GNKEQMEELVQQMSRKRGFPR 545
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
L+T + ++++ +++ + M S G TY +++ L G LDEAE +++
Sbjct: 520 LVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFS 579
Query: 148 KIFLDH-LEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
++ + + P + ++ ++ G EK ++ + M G+RPNV + + +AF +
Sbjct: 580 EMKRKNWVPDEP--VYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLR 637
Query: 207 LGML-DKYEKLK 217
+ L D Y L+
Sbjct: 638 VHKLADAYNLLQ 649
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 5/150 (3%)
Query: 62 IKGL--SNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQ 119
I GL S E LD EL+ ++ + E + ++ K M++ G
Sbjct: 299 INGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGV 358
Query: 120 GRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD-HLEGTPRIFFDKMISIYYNRGMHEKM 178
TY L+ L + G++D A L ++ D H T I ++ +I ++ +
Sbjct: 359 QPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT--ITYNLIIEGHFRHHSKKDA 416
Query: 179 FEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
F + ++ME G+ PNV S+M + + G
Sbjct: 417 FRLLSEMENAGISPNVYTYSIMIHGLCQSG 446
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 93 KALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD 152
K + L N +++R V K ++ KG Y +L+ G+LD A E++ ++ +
Sbjct: 70 KLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIK 129
Query: 153 HLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
E + +++ G ++ F M E G+ PN+ +++ +AF+K+G LD
Sbjct: 130 GSE-PDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLD 187
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI-FFDKMISIYYNRGMHEKMFEIFA 183
TY L+NAL + GR+ EA + + L TP I ++ ++ + G + +FA
Sbjct: 137 TYGFLVNALGKAGRVQEARSFFDAMLERGL--TPNIPTYNLLMDAFRKVGQLDMALGLFA 194
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+M+ G +P+V +++ +A G + KL K
Sbjct: 195 EMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHK 230
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 15/101 (14%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
+++ ++ GRLD+A ++ D E + + MIS Y ++ +F +M
Sbjct: 287 MVSGYSKAGRLDDA-----RVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCS 341
Query: 189 GVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRY 229
G++P+V + + +A LG LDK KW +RY
Sbjct: 342 GIKPDVVTMLSVISACVNLGTLDK----------AKWVHRY 372
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Query: 86 FP-LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEE 144
FP ++TV + L + + + + M K T+ L++ L + GR+D+A
Sbjct: 436 FPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYS 495
Query: 145 LWTKIF-LDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNA 203
L+ K+ H+ G I + +I ++ G E +I+ +M G P++++++ +
Sbjct: 496 LYEKMLDCGHVPGA--IVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDC 553
Query: 204 FQKLGMLDKYEKL 216
K G +K L
Sbjct: 554 VFKAGETEKGRAL 566
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
+I+ K + TL + + + + +G T+ TY L+ AL R + L +
Sbjct: 43 VISRTKLMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLS 102
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRG-MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
K+ + ++ I F+ MI+ + + G +HE M +IF M+E G +P S + + F
Sbjct: 103 KVEENGVK-PDSILFNAMINAFSDSGKVHEAM-KIFRKMKECGCKPTTSTFNTLIKGFGI 160
Query: 207 LG 208
+G
Sbjct: 161 VG 162
>gi|342321271|gb|EGU13205.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]
Length = 1272
Score = 38.5 bits (88), Expect = 3.5, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 53/106 (50%), Gaps = 14/106 (13%)
Query: 107 IIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP-------- 158
++++ + ++++G TY L+L +L G +DEAE+L+ + LD + +P
Sbjct: 678 VLELFRDLIARGVRPNKSTYTLVLQSLCNAGLMDEAEDLF--LILDRRQLSPHRPIGTEV 735
Query: 159 ----RIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMM 200
++ F M++ Y G EK + +M G++P ++++
Sbjct: 736 IEPDQVLFTSMMAGYLRTGQREKADAMLTEMRVRGMKPGSHTLALL 781
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
TY ++ A ++ D+AEEL+ ++ + + R F+ M+ +Y G H+K +
Sbjct: 1036 TYRSMIAAFSKQQLYDQAEELFEELRSNGYK-LDRSFYHLMMKMYRTSGDHQKAENLLEI 1094
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
M+E G+ PN + + ++ ++ K G ++ +++ K
Sbjct: 1095 MKEAGIEPNTATMHLLMVSYGKSGQPEEADRILK 1128
>gi|255661148|gb|ACU25743.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 425
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI ++ + + E+F M LG
Sbjct: 327 IHILAGAGRIEEATWVFRQA-IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLG 385
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL DK
Sbjct: 386 YFPDSNVIALVLNAYGKLHEFDK 408
>gi|357112772|ref|XP_003558181.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic-like [Brachypodium distachyon]
Length = 849
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 84 LEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAE 143
L+ + T +K K WK + + M + G + T+ L+NA A G +D A
Sbjct: 375 LKLDVFTYSTMMKVFAEAKMWKMASNIKEDMRAVGARLNLVTWSSLINAYANSGLVDGAI 434
Query: 144 ELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSI 196
E+ ++ D + T F + ++ +R +++ F +F +E G+R ++S+
Sbjct: 435 EILEEMIRDGCQPTAPCFNIILTALVKSR-QYDRAFRLFYSWKESGIRISLSL 486
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 56/116 (48%), Gaps = 15/116 (12%)
Query: 110 VTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP---RIFFDKMI 166
+ K +L G + TY +++N +LD+ EE W ++F+ +E + F+ +I
Sbjct: 181 LMKEILKAGYEPNVFTYSIIINCYC---KLDKVEEAW-EVFMKMIESNCVPNAVTFNTLI 236
Query: 167 SIYYNRGMHEKMFEIFADMEELGVRPNV--------SIVSMMGNAFQKLGMLDKYE 214
+ + GM E ++FA+ME++G + + S+ G + + + +K E
Sbjct: 237 AGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLE 292
>gi|255661150|gb|ACU25744.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
gi|255661152|gb|ACU25745.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 426
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI ++ + + E+F M LG
Sbjct: 327 IHILAGAGRIEEATWVFRQA-IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLG 385
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL DK
Sbjct: 386 YFPDSNVIALVLNAYGKLHEFDK 408
>gi|410110091|gb|AFV61125.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
micrantha]
Length = 406
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI + + + E+F M LG
Sbjct: 299 IHILAGAGRIEEATYVFRQA-IDAGEAKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLG 357
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL DK
Sbjct: 358 YFPDSNVIAVVLNAYGKLQEFDK 380
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFF 162
D +++ + M +G T+ L+N +D ++DEA L+ K+ +D + F
Sbjct: 458 DLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM-IDSNVIPNEVTF 516
Query: 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPN 193
+ MI Y G K F+++ M E+G++P+
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPD 547
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTK--------IFLDHLEGTPRIFFDKMISIYYNR---- 172
T+ L+N L + RL+EA L+ + +FL +GT ++F + + R
Sbjct: 445 TFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCES 504
Query: 173 GMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
GM K +++ + + GV P++ +++ N F K G ++ KL K+
Sbjct: 505 GMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKE 551
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFA 183
+Y LLNA + G+ ++A +++ + +H + P + ++ +I Y ++G+ + EI
Sbjct: 411 SYTSLLNAYGKSGKPEKAMKVFELMRRNHCK--PNLVSYNALIDAYGSKGLLTEAVEILH 468
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIK 231
+ME GV+PN+ + + A + G +K+K K E R IK
Sbjct: 469 EMERNGVQPNIVSICTLLAACGRCG-----QKVKIKSVLSAAELRGIK 511
>gi|255661164|gb|ACU25751.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 426
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI ++ + + E+F M LG
Sbjct: 327 IHILAGAGRIEEATWVFRQA-IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLG 385
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL DK
Sbjct: 386 YFPDSNVIALVLNAYGKLHEFDK 408
>gi|302791627|ref|XP_002977580.1| hypothetical protein SELMODRAFT_107283 [Selaginella moellendorffii]
gi|300154950|gb|EFJ21584.1| hypothetical protein SELMODRAFT_107283 [Selaginella moellendorffii]
Length = 555
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 22/178 (12%)
Query: 40 PRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE 99
P V IGT+ ++ K VT KG+ + + YG S I + LI + + L+
Sbjct: 163 PNVVLFNTLIGTLGRAGK-VTLAKGMFD-EMATYGLEPSEITLSI---LIDMYTKVGALD 217
Query: 100 NEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFL-----DHL 154
D I+ KW L + Y LL + E G + AE L ++ + DH+
Sbjct: 218 KALDVYDTIKQKKWKLD------VLVYNTLLKSCVESGNIQRAESLIAEMEMEKQWPDHM 271
Query: 155 EGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+ ++++Y +GM ++ +F ++ L V P + +M+ A ++ G D+
Sbjct: 272 T------YGILMNVYATKGMVAEVRAMFDKLKNLAVFPKAAFYTMLIKASKQAGDFDR 323
>gi|255661158|gb|ACU25748.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 426
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI ++ + + E+F M LG
Sbjct: 327 IHILAGAGRIEEATWVFRQA-IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLG 385
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL DK
Sbjct: 386 YFPDSNVIALVLNAYGKLHEFDK 408
>gi|6983870|dbj|BAA90805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125553873|gb|EAY99478.1| hypothetical protein OsI_21446 [Oryza sativa Indica Group]
Length = 510
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
R Y LL+A A+ G +D AE+L+ + + + + M+S Y G HE+ E
Sbjct: 151 RDTAVYNALLSAYAKGGLVDSAEKLF-----EEMPDRNVVSWTAMVSGYAQNGRHEEAVE 205
Query: 181 IFADM-EELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
F +M E GV+PN VS + A +G ++ K+++
Sbjct: 206 TFLEMWERAGVQPNELTVSSVLPACAAVGAMELGRKVEE 244
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 105 KRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLE---GTPRIF 161
K + V + M + G TY +LLN + GR D+ +++ ++ + + + GT
Sbjct: 329 KEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGT---- 384
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
++ +I ++ G +++ +F DM E V PN+ + A K G+ YE KK
Sbjct: 385 YNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGL---YEDAKK 438
>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 765
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR-IFFDKMISIYYNRGMHEKMF 179
+ + ++ +++A E+GR+DEA L+ ++ LD L TP F +I + + M +
Sbjct: 155 QDLSSWSTIISAYTEEGRIDEAVRLFLRM-LD-LGITPNSSIFSTLIMSFTDPSMLDLGK 212
Query: 180 EIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYE 214
+I + + +G N+SI +++ N + K G LD E
Sbjct: 213 QIHSQLIRIGFAANISIETLISNMYVKCGWLDGAE 247
>gi|255661156|gb|ACU25747.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 426
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI ++ + + E+F M LG
Sbjct: 327 IHILAGAGRIEEATWVFRQA-IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLG 385
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL DK
Sbjct: 386 YFPDSNVIALVLNAYGKLHEFDK 408
>gi|422292736|gb|EKU20038.1| hypothetical protein NGA_2025410 [Nannochloropsis gaditana CCMP526]
gi|422295019|gb|EKU22318.1| hypothetical protein NGA_2025420 [Nannochloropsis gaditana CCMP526]
Length = 527
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI-F 161
+W + +Q+ + M +KG TY LL+ L + +L+ A+ LW ++ D P +
Sbjct: 206 EWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMR-DKGHVKPNLEL 264
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+ + ++ G + IF +M V+PN+ + + AF + G
Sbjct: 265 YSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAG 311
>gi|255661154|gb|ACU25746.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 426
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI ++ + + E+F M LG
Sbjct: 327 IHILAGAGRIEEATWVFRQA-IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLG 385
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL DK
Sbjct: 386 YFPDSNVIALVLNAYGKLHEFDK 408
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L +L + + +V K M+ G + + +L++A + G +++AE+L L+ +
Sbjct: 169 LNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQL-----LNEM 223
Query: 155 EGT---PRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
E P +F ++ +IS+Y +GMH + I ME GV P++ + + F + G
Sbjct: 224 ESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREG 281
>gi|294657637|ref|XP_459933.2| DEHA2E14432p [Debaryomyces hansenii CBS767]
gi|199432840|emb|CAG88177.2| DEHA2E14432p [Debaryomyces hansenii CBS767]
Length = 1187
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 91 VKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIF 150
++ L+ E KDWK + + + M KGQ + Y +++NALA G DE +L+ ++
Sbjct: 415 IEVLLRVSEEFKDWKLLQKQFEDMYGKGQLPYVVHYSIVMNALAAIGAKDEVMQLFNQLS 474
Query: 151 LDHLEGTPRIF 161
+L TP I+
Sbjct: 475 KRNLSPTPSIY 485
>gi|115489794|ref|NP_001067384.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|77556813|gb|ABA99609.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649891|dbj|BAF30403.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|125580213|gb|EAZ21359.1| hypothetical protein OsJ_37016 [Oryza sativa Japonica Group]
Length = 859
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
L+T + ++++ ++++ K M G TY +++ L G LDEAE ++
Sbjct: 506 LVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFI 565
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
++ D P + ++ ++ G +K + M + G++PNV + + +AF K+
Sbjct: 566 EMRHDWAPDEP--VYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKI 623
Query: 208 GML-DKYEKLK 217
D Y L+
Sbjct: 624 NRFQDAYSVLQ 634
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 69/151 (45%), Gaps = 4/151 (2%)
Query: 61 CIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQG 120
C KG ++ V+ + +A +L+ ++T + + D ++ + + MLS
Sbjct: 515 CRKGNMDMASSVFSDM---LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIA 571
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
T T+ ++N L + G++ EA + K FL+ + ++ ++ + G +
Sbjct: 572 PTDFTFNTIINGLCKVGQMSEARD-KLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALA 630
Query: 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
++ +M E GV PNV + + N F K +D
Sbjct: 631 VYREMCEFGVSPNVVTYTSLINGFCKSNRID 661
>gi|224137724|ref|XP_002322628.1| predicted protein [Populus trichocarpa]
gi|222867258|gb|EEF04389.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
LLN ++ G L A +++ + + + + ++ MI+ Y + G + E+F DM+ L
Sbjct: 301 LLNMYSKCGELSIARKIFDDVVISQRD---LVLWNGMIAAYAHHGCGMEAIELFEDMQGL 357
Query: 189 GVRPN-VSIVSMMGNAFQKLGMLDK 212
G +PN VS V ++ +A G++D+
Sbjct: 358 GFKPNDVSYVELL-SACSHAGLVDE 381
>gi|125595888|gb|EAZ35668.1| hypothetical protein OsJ_19954 [Oryza sativa Japonica Group]
Length = 510
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
R Y LL+A A+ G +D AE+L+ + + + + M+S Y G HE+ E
Sbjct: 151 RDTAVYNALLSAYAKGGLVDSAEKLF-----EEMPDRNVVSWTAMVSGYAQNGRHEEAVE 205
Query: 181 IFADM-EELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
F +M E GV+PN VS + A +G ++ K+++
Sbjct: 206 TFLEMWERAGVQPNELTVSSVLPACAAVGAMELGRKVEE 244
>gi|297605095|ref|NP_001056652.2| Os06g0125600 [Oryza sativa Japonica Group]
gi|255676676|dbj|BAF18566.2| Os06g0125600 [Oryza sativa Japonica Group]
Length = 377
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180
R Y LL+A A+ G +D AE+L+ + + + + M+S Y G HE+ E
Sbjct: 151 RDTAVYNALLSAYAKGGLVDSAEKLF-----EEMPDRNVVSWTAMVSGYAQNGRHEEAVE 205
Query: 181 IFADM-EELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
F +M E GV+PN VS + A +G ++ K+++
Sbjct: 206 TFLEMWERAGVQPNELTVSSVLPACAAVGAMELGRKVEE 244
>gi|195612318|gb|ACG27989.1| hypothetical protein [Zea mays]
Length = 603
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
M + G Y ++ ALA+ AE+L+ + + + G P +F K+ ++ G
Sbjct: 283 MEADGLSPDAAIYSSVIGALADAREKAAAEDLYHEAWDRKMLGDPDMFL-KLTIMHAEAG 341
Query: 174 MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK 206
+ E E+ DM ++G+R I+S + N F K
Sbjct: 342 LVESTIEVAKDMRQIGLRVTDCILSTIVNGFVK 374
>gi|387192495|gb|AFJ68660.1| hypothetical protein NGATSA_2025410, partial [Nannochloropsis
gaditana CCMP526]
Length = 527
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI-F 161
+W + +Q+ + M +KG TY LL+ L + +L+ A+ LW ++ D P +
Sbjct: 206 EWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMR-DKGHVKPNLEL 264
Query: 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
+ + ++ G + IF +M V+PN+ + + AF + G
Sbjct: 265 YSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAG 311
>gi|302784326|ref|XP_002973935.1| hypothetical protein SELMODRAFT_100342 [Selaginella moellendorffii]
gi|300158267|gb|EFJ24890.1| hypothetical protein SELMODRAFT_100342 [Selaginella moellendorffii]
Length = 232
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
LLN A+ G++ A++L+ D ++ + + MI+ Y G HE+ EIF +M
Sbjct: 47 LLNMYAKAGKIQRAKDLF-----DGIQKRTLVSWTTMITAYSQHGRHEEALEIFKNMILE 101
Query: 189 GVRP-NVSIVSMMGNAFQKLGML 210
G P +++ +S++ NA G+L
Sbjct: 102 GFEPDDITFISIL-NACSHAGLL 123
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L +L + + +V K M+ G + + +L++A + G +++AE+L L+ +
Sbjct: 169 LNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQL-----LNEM 223
Query: 155 EGT---PRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
E P +F ++ +IS+Y +GMH + I ME GV P++ + + F + G
Sbjct: 224 ESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREG 281
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 7/147 (4%)
Query: 73 YGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNA 132
+G +D + LE ++T + + E K I V K M KG + TY L+
Sbjct: 240 HGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKG 299
Query: 133 LAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVR 191
L++ +DEA L ++ P + F+ +I + G + F++ A MEE G
Sbjct: 300 LSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCM 359
Query: 192 PNVSIVSMMGNAFQKLGMLDKYEKLKK 218
N+ +++ +G L + K++K
Sbjct: 360 VNLVTYNLL------IGGLLRVHKVRK 380
>gi|146422287|ref|XP_001487084.1| hypothetical protein PGUG_00461 [Meyerozyma guilliermondii ATCC
6260]
Length = 341
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 36 RPRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKAL 95
RP + R+RI + A IK +S+V V+ +D A E+ F T++K +
Sbjct: 214 RPSTLLEYSPRRRIIIATDVASSSVQIKQISDVLSGVFNLVDKLAAKEITFKSETLRKVV 273
Query: 96 KTLENE-KDWKRI 107
KT ENE WKRI
Sbjct: 274 KTRENELAKWKRI 286
>gi|356534408|ref|XP_003535747.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35130-like [Glycine max]
Length = 357
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFAD 184
Y +N L + G D+AEE++ ++ D + T + +I++Y G +F +
Sbjct: 8 VYNAYINGLMKGGNSDKAEEIFKRMKKDACKSTTETY-TMLINLYGKAGKSFMALILFHE 66
Query: 185 MEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
M +PN+ + + NAF + G+ +K E++
Sbjct: 67 MTTHKCKPNICTYTALVNAFVREGLCEKAEEV 98
>gi|302756243|ref|XP_002961545.1| hypothetical protein SELMODRAFT_21801 [Selaginella moellendorffii]
gi|300170204|gb|EFJ36805.1| hypothetical protein SELMODRAFT_21801 [Selaginella moellendorffii]
Length = 520
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188
L++ A+ G LDEA ++ ++ L+ + + MIS Y G + E+F M++
Sbjct: 356 LVHMYAKCGSLDEARRVFDRM---SLQSRNIVSWTAMISAYAQHGRSSESMELFQRMQQR 412
Query: 189 GVRPN-VSIVSMMGNAFQKLGMLDK 212
GV PN V+ +S++ + G++D
Sbjct: 413 GVEPNQVTFISILSSCSHS-GLIDH 436
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 7/150 (4%)
Query: 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL 129
++ +G +D + LE ++T + + E K I V K M KG + TY L
Sbjct: 237 KKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTL 296
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEEL 188
+ L++ +DEA L ++ P + F+ +I + G + F++ A MEE
Sbjct: 297 IKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEET 356
Query: 189 GVRPNVSIVSMMGNAFQKLGMLDKYEKLKK 218
G N+ +++ +G L + K++K
Sbjct: 357 GCMVNLVTYNLL------IGGLLRVHKVRK 380
>gi|168025874|ref|XP_001765458.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683308|gb|EDQ69719.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 9/143 (6%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
L E + WK+++ + + G + + ++ALA+ G+ + AEE + ++
Sbjct: 469 LSAYEKGRQWKKVLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGC 528
Query: 155 EGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK- 212
P I + +I Y + G+ EK +F M +G+RPN + A+ K L+K
Sbjct: 529 --LPNIVTYSSLIKAYGDVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKV 586
Query: 213 ---YEKLKKKYP--PPKWEYRYI 230
+E ++ +Y P K+ Y I
Sbjct: 587 IIFFESMEPQYGVEPDKYAYAAI 609
>gi|302793025|ref|XP_002978278.1| hypothetical protein SELMODRAFT_108052 [Selaginella moellendorffii]
gi|300154299|gb|EFJ20935.1| hypothetical protein SELMODRAFT_108052 [Selaginella moellendorffii]
Length = 337
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 114 MLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173
++S+G G L+N + G L +AE L+ D + + ++ MI+ Y + G
Sbjct: 137 IVSRGLDSDTGLKNSLINLYGKCGSLKDAESLF-----DCMRCRDLVTWNSMITTYSHHG 191
Query: 174 MHEKMFEIFADMEELGVRPN-VSIVSMM 200
E E+F M+ G++PN V+ VSM+
Sbjct: 192 RDEISLEVFMQMKLDGIQPNDVTFVSML 219
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
Query: 98 LENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT 157
L +K K V ML+ G + TY L A A+DG ++AE + + +
Sbjct: 208 LCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVNPN 267
Query: 158 PRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEK 215
R ++ Y +G + + M +LG+ PN+ I + + F +G D +K
Sbjct: 268 ERTC-GIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDK 324
>gi|357438561|ref|XP_003589556.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478604|gb|AES59807.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 761
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 24/132 (18%)
Query: 57 KLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLS 116
+LVT GL +V +++YG L W L + ++ D +RI + + ML
Sbjct: 295 RLVT--NGL-DVHKDIYGGL----IW------------LHSYQDSIDKERIEALRQEMLR 335
Query: 117 KGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP--RIFFDKMISIYYNRGM 174
G + +L A + +G ++EAE+ W K L E P + F KM +Y GM
Sbjct: 336 AGIDESQEVLVSILRACSREGEVEEAEKTWCK--LSQFESNPPSQAFVYKM-EVYSKVGM 392
Query: 175 HEKMFEIFADME 186
K EIF +M+
Sbjct: 393 PMKSLEIFREMK 404
>gi|302765741|ref|XP_002966291.1| hypothetical protein SELMODRAFT_86162 [Selaginella moellendorffii]
gi|300165711|gb|EFJ32318.1| hypothetical protein SELMODRAFT_86162 [Selaginella moellendorffii]
Length = 368
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 110 VTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIY 169
V ++S+G G L+N + G L +AE L+ D + + ++ MI+ Y
Sbjct: 164 VHASIVSRGLDSDTGLKNSLINLYGKCGSLKDAESLF-----DCMRCRDLVTWNSMITTY 218
Query: 170 YNRGMHEKMFEIFADMEELGVRPN-VSIVSMM 200
+ G E E+F M+ G++PN V+ VSM+
Sbjct: 219 SHHGRDEISLEVFMQMKLDGIQPNDVTFVSML 250
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 9/153 (5%)
Query: 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL 129
E+ +G L ++ LK N +V + + G TY +
Sbjct: 482 EKAFGVFQRMKKENLAIDIVAYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTM 541
Query: 130 LN-ALAEDGRLDEAEELWTKIFLDHLEGT--PRIFFDKMISIYYNRGMHEKMFEIFADME 186
L+ A A GR++EAEEL + + D GT + ++ +I+ Y G HE M + A M
Sbjct: 542 LDGAYARAGRVEEAEELVSAMERD---GTKPDTLIYNSLINAYGVSGRHEDMEALLAKMV 598
Query: 187 ELG---VRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ +P++ + + + + G + + E+L
Sbjct: 599 KSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEEL 631
>gi|224107985|ref|XP_002314678.1| predicted protein [Populus trichocarpa]
gi|222863718|gb|EEF00849.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI 160
+KD++ + V M KG + TY +++AL + +L+EA E++ K+ + +
Sbjct: 274 QKDFRNVEAVFDEMQEKGCKPNVITYTTVMHALGKARQLNEALEVYEKMKRNGCLPDSK- 332
Query: 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMM 200
F+ +I + G + +++F DME+ GV N+ + + M
Sbjct: 333 FYSSLIYVLSQSGRIKDAWDVFEDMEKQGVCRNLWVYNTM 372
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIFLDH--LEGTPRIFFDKMISIYYNRGMHEKMFEIF 182
Y LL AL + G +D A+ L +++ ++ L+ T + MI +G+ +K ++F
Sbjct: 391 CYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTH---NIMICGLCKKGLIDKAMQVF 447
Query: 183 ADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219
+M E G P V + + + + GML++ L K
Sbjct: 448 DEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHK 484
>gi|255661176|gb|ACU25757.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 426
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 130 LNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189
++ LA GR++EA ++ + +D E F++MI ++ + + E+F M LG
Sbjct: 327 IHILAGAGRIEEATWVFRQA-IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLG 385
Query: 190 VRPNVSIVSMMGNAFQKLGMLDK 212
P+ ++++++ NA+ KL DK
Sbjct: 386 YFPDSNVIALVLNAYGKLHEFDK 408
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Query: 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP-R 159
EK +R I+ M S+G + TY LL AL +DG++D A EL + L +P
Sbjct: 237 EKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQ--LSSKGCSPVL 294
Query: 160 IFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211
I ++ +I G ++ ++ +M G++P++ S + + G +D
Sbjct: 295 ITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVD 346
>gi|414585491|tpg|DAA36062.1| TPA: hypothetical protein ZEAMMB73_917988 [Zea mays]
gi|414585492|tpg|DAA36063.1| TPA: hypothetical protein ZEAMMB73_917988 [Zea mays]
Length = 787
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 117 KGQGRT-MGTYFLLLNALAEDGRLDEAEELWTK-IFLDHLEGTPRIFFDKMISIYYNRGM 174
+G GR +G Y ++++ LA+ GRLD A ++ + + + H T M+ G
Sbjct: 294 EGIGRAPVGVYSVMVDVLAKAGRLDAAMGMYREMVVVGHRVSTA--VSTAMVEALVRSGK 351
Query: 175 HEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216
+ E++ +M G+RP+ + +M+ A + G LD KL
Sbjct: 352 LDAGMELWEEMRRGGLRPSFGLYTMVVEANARSGRLDMAAKL 393
>gi|297839237|ref|XP_002887500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333341|gb|EFH63759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 989
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 82 WELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDE 141
W E ++ + L ++ D +RI+ ML G TY L+ + G L +
Sbjct: 544 WPDECTYNSLIQMLAGVDLVDDAQRIL---AEMLDSGCKPGCKTYAALIASYVRLGLLSD 600
Query: 142 AEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMG 201
A +L+ + ++ + + +I+ + GM E+ + F MEE GV+ N +++ +
Sbjct: 601 AVDLYEAMKKTGVKPN-EVVYGSLINGFAESGMVEEAIQYFKLMEEHGVQSNHIVLTSLI 659
Query: 202 NAFQKLGMLDK----YEKLKKKYPPP 223
A+ K+G L++ Y+K+K P
Sbjct: 660 KAYSKVGCLEEARRVYDKMKDSGGGP 685
>gi|125537564|gb|EAY84052.1| hypothetical protein OsI_39281 [Oryza sativa Indica Group]
Length = 762
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147
L+T + ++++ ++++ K M G TY +++ L G LDEAE ++
Sbjct: 506 LVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFI 565
Query: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207
++ D P + ++ ++ G +K + M + G++PNV + + +AF K+
Sbjct: 566 EMRHDWAPDEP--VYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKI 623
Query: 208 GML-DKYEKLK 217
D Y L+
Sbjct: 624 NRFQDAYSVLQ 634
>gi|302763819|ref|XP_002965331.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
gi|300167564|gb|EFJ34169.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
Length = 806
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEE 187
L+N A G L EA E++ I LE + + F MIS Y + G + EIF +M
Sbjct: 394 LINMYARSGLLAEAREVFDSI----LENSKTVVSFTTMISAYAHNGHPRQALEIFREMTA 449
Query: 188 LGVRPN 193
GV PN
Sbjct: 450 RGVAPN 455
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 125 TYFLLLNALAEDGRLDEAEELWTKIF-LDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFA 183
T+ L++ L + GR+D+A L+ K+ H+ G I + +I ++ G E +I+
Sbjct: 231 TFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGA--IVYTSLIRSFFKCGRKEDGHKIYK 288
Query: 184 DMEELGVRPNVSIVSMMGNAFQKLGMLDK 212
+M G P++++++ + K G +K
Sbjct: 289 EMVHTGCSPDLTLINTYMDCVFKAGETEK 317
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Query: 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI 149
T + LK+ + + ++ + ML G Y +L++ A+ GR+DEA L+ ++
Sbjct: 10 TFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEM 69
Query: 150 FLDHLEGTPRIF-FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG 208
LE P I+ ++ +++ + ++ E+F M E G P+V S + + K G
Sbjct: 70 VSVGLE--PSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTG 127
>gi|297796623|ref|XP_002866196.1| hypothetical protein ARALYDRAFT_495822 [Arabidopsis lyrata subsp.
lyrata]
gi|297312031|gb|EFH42455.1| hypothetical protein ARALYDRAFT_495822 [Arabidopsis lyrata subsp.
lyrata]
Length = 821
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/140 (19%), Positives = 63/140 (45%), Gaps = 1/140 (0%)
Query: 98 LENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT 157
L E + ++ + + M+ +G + TY ++ L + G+L++A L+ +I +E
Sbjct: 138 LSREGNIEKALGLLGKMIKEGIEPNLITYTAIIRGLCKKGKLEDAFVLFDRILSFGIE-V 196
Query: 158 PRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLK 217
+ +I +G + F + DME+ G++P++ + + N K G + + + +
Sbjct: 197 DEFLYVTLIDGICKKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCKAGRVSEADDIS 256
Query: 218 KKYPPPKWEYRYIKGKRVRI 237
K Y + V++
Sbjct: 257 KGVVGDVITYSTLLDSYVKV 276
>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 2/132 (1%)
Query: 86 FPLITVKKAL-KTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEE 144
FP IT L + K + V + M G TY +LLN GR D+ +
Sbjct: 77 FPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRD 136
Query: 145 LWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204
L+ ++ + + E ++ +I+++ G +++ +F DM E V PN+ + A
Sbjct: 137 LFLEMKVSNTEPNAAT-YNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFAC 195
Query: 205 QKLGMLDKYEKL 216
K G+ + +K+
Sbjct: 196 GKGGLHEDAKKI 207
>gi|156083863|ref|XP_001609415.1| pentatricopeptide repeat domain containing protein [Babesia bovis
T2Bo]
gi|154796666|gb|EDO05847.1| pentatricopeptide repeat domain containing protein [Babesia bovis]
Length = 1067
Score = 38.5 bits (88), Expect = 4.2, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 9/138 (6%)
Query: 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154
+K + +R + + M+S+G R TY +++A A G + A L ++ ++ +
Sbjct: 775 IKGFGQNRQLQRAMSIYDMMVSEGVMRNTVTYNSIIDACARVGDMKAAAALLEEMMMNQV 834
Query: 155 EGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYE 214
E I F +I Y + ++ F++ + M E G++P+ + + + K G L E
Sbjct: 835 E-PDLITFSTIIKGYCVQCNMDQSFQLLSIMYERGIKPDGILYNSLLEGCVKSGRLWLCE 893
Query: 215 KLKKKYPPPKWEYRYIKG 232
KL WE I G
Sbjct: 894 KL--------WEQMRIHG 903
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.132 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,834,448,931
Number of Sequences: 23463169
Number of extensions: 199030467
Number of successful extensions: 586916
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 1458
Number of HSP's that attempted gapping in prelim test: 581450
Number of HSP's gapped (non-prelim): 6648
length of query: 310
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 168
effective length of database: 9,027,425,369
effective search space: 1516607461992
effective search space used: 1516607461992
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 76 (33.9 bits)