Query 021583
Match_columns 310
No_of_seqs 165 out of 1856
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 06:14:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021583.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021583hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g26_A Pentatricopeptide repea 100.0 7.5E-33 2.5E-37 259.0 19.8 199 72-281 9-219 (501)
2 4g26_A Pentatricopeptide repea 100.0 8.9E-32 3.1E-36 251.7 22.4 189 37-248 22-219 (501)
3 3spa_A Mtrpol, DNA-directed RN 99.9 2.8E-23 9.7E-28 201.7 11.0 136 87-223 126-265 (1134)
4 3spa_A Mtrpol, DNA-directed RN 99.8 1E-20 3.5E-25 183.9 10.6 127 122-259 126-258 (1134)
5 2xpi_A Anaphase-promoting comp 99.7 5E-15 1.7E-19 140.4 22.5 243 23-279 288-557 (597)
6 2xpi_A Anaphase-promoting comp 99.7 1E-14 3.5E-19 138.3 22.4 196 68-279 320-523 (597)
7 1w3b_A UDP-N-acetylglucosamine 99.2 1.1E-08 3.6E-13 91.6 26.7 183 67-266 149-334 (388)
8 1w3b_A UDP-N-acetylglucosamine 99.2 2.6E-09 8.9E-14 95.6 22.6 184 67-266 183-368 (388)
9 2ho1_A Type 4 fimbrial biogene 99.2 3.1E-09 1.1E-13 89.0 20.8 184 69-266 53-238 (252)
10 2y4t_A DNAJ homolog subfamily 99.2 1.7E-09 5.9E-14 98.4 20.2 199 41-266 25-240 (450)
11 3mkr_A Coatomer subunit epsilo 99.2 3.4E-09 1.2E-13 91.9 20.3 176 67-265 79-263 (291)
12 2vq2_A PILW, putative fimbrial 99.2 9.1E-09 3.1E-13 84.0 21.6 184 69-265 24-210 (225)
13 2y4t_A DNAJ homolog subfamily 99.1 6.7E-09 2.3E-13 94.5 21.4 194 67-279 157-369 (450)
14 2pl2_A Hypothetical conserved 99.1 7.9E-09 2.7E-13 85.3 18.7 175 69-263 21-211 (217)
15 2q7f_A YRRB protein; TPR, prot 99.1 1.1E-08 3.8E-13 84.8 18.2 196 44-266 25-222 (243)
16 3nf1_A KLC 1, kinesin light ch 99.0 4.1E-09 1.4E-13 90.6 14.5 188 28-219 13-220 (311)
17 3uq3_A Heat shock protein STI1 99.0 2.2E-08 7.6E-13 83.5 18.0 185 67-265 19-235 (258)
18 1b89_A Protein (clathrin heavy 99.0 1.3E-09 4.4E-14 98.8 10.9 210 47-297 37-267 (449)
19 4eqf_A PEX5-related protein; a 99.0 1.7E-08 5.8E-13 89.4 17.8 185 67-266 79-276 (365)
20 2ho1_A Type 4 fimbrial biogene 99.0 1.9E-07 6.6E-12 77.9 22.8 150 66-219 84-234 (252)
21 3as5_A MAMA; tetratricopeptide 99.0 5.9E-08 2E-12 76.4 18.6 143 72-219 27-169 (186)
22 2fo7_A Synthetic consensus TPR 99.0 5.9E-08 2E-12 72.0 17.5 126 90-219 3-128 (136)
23 4eqf_A PEX5-related protein; a 99.0 1.6E-08 5.5E-13 89.6 16.2 183 67-265 113-309 (365)
24 1fch_A Peroxisomal targeting s 99.0 8.1E-08 2.8E-12 84.8 20.3 188 67-261 112-354 (368)
25 3vtx_A MAMA; tetratricopeptide 99.0 1.8E-07 6.1E-12 74.4 20.5 160 44-219 7-166 (184)
26 3mkr_A Coatomer subunit epsilo 99.0 1.4E-08 4.7E-13 88.0 14.9 188 67-279 48-241 (291)
27 3hym_B Cell division cycle pro 99.0 9.2E-08 3.2E-12 82.8 19.8 184 68-266 106-299 (330)
28 1fch_A Peroxisomal targeting s 98.9 2.7E-07 9.3E-12 81.3 22.9 185 67-265 78-313 (368)
29 3hym_B Cell division cycle pro 98.9 3.8E-07 1.3E-11 78.8 23.2 193 67-266 70-265 (330)
30 2q7f_A YRRB protein; TPR, prot 98.9 1.9E-07 6.4E-12 77.2 19.9 149 66-219 70-218 (243)
31 3vtx_A MAMA; tetratricopeptide 98.9 2.8E-07 9.6E-12 73.2 20.0 162 87-266 4-170 (184)
32 2vq2_A PILW, putative fimbrial 98.9 3.5E-07 1.2E-11 74.4 20.6 150 67-219 56-207 (225)
33 3cv0_A Peroxisome targeting si 98.9 2.4E-07 8.3E-12 80.0 19.7 144 72-219 157-311 (327)
34 1xnf_A Lipoprotein NLPI; TPR, 98.9 7.4E-07 2.5E-11 75.0 21.9 142 73-219 25-169 (275)
35 3ieg_A DNAJ homolog subfamily 98.9 4.6E-07 1.6E-11 79.1 21.1 184 68-265 18-216 (359)
36 3as5_A MAMA; tetratricopeptide 98.9 1E-07 3.5E-12 75.0 15.4 163 88-265 8-172 (186)
37 3cv0_A Peroxisome targeting si 98.9 3.7E-07 1.3E-11 78.8 20.3 191 67-263 69-312 (327)
38 1b89_A Protein (clathrin heavy 98.9 7.1E-10 2.4E-14 100.5 2.8 115 89-219 33-147 (449)
39 3edt_B KLC 2, kinesin light ch 98.8 1.5E-08 5.2E-13 85.6 10.8 168 41-219 42-277 (283)
40 2pl2_A Hypothetical conserved 98.8 2E-07 6.7E-12 76.8 16.4 165 85-266 2-180 (217)
41 3ieg_A DNAJ homolog subfamily 98.8 2.8E-06 9.4E-11 74.0 24.8 194 67-279 134-346 (359)
42 3edt_B KLC 2, kinesin light ch 98.8 4.8E-08 1.6E-12 82.4 12.8 148 72-219 27-194 (283)
43 4gyw_A UDP-N-acetylglucosamine 98.8 2.5E-07 8.7E-12 89.9 18.9 162 41-219 8-170 (723)
44 1ouv_A Conserved hypothetical 98.8 5.3E-06 1.8E-10 70.2 24.8 175 68-268 21-217 (273)
45 4gyw_A UDP-N-acetylglucosamine 98.8 4.4E-07 1.5E-11 88.2 19.2 158 87-263 8-171 (723)
46 3nf1_A KLC 1, kinesin light ch 98.8 6.9E-08 2.4E-12 82.8 12.2 176 87-265 26-223 (311)
47 3uq3_A Heat shock protein STI1 98.8 5.7E-07 1.9E-11 74.8 17.3 150 67-219 52-232 (258)
48 2gw1_A Mitochondrial precursor 98.7 8.5E-07 2.9E-11 81.6 19.3 150 67-219 20-262 (514)
49 2fo7_A Synthetic consensus TPR 98.7 2E-06 7E-11 63.4 16.4 117 68-188 16-132 (136)
50 1ouv_A Conserved hypothetical 98.7 8.9E-06 3E-10 68.8 22.0 176 66-267 55-252 (273)
51 3fp2_A TPR repeat-containing p 98.7 1.8E-06 6.1E-11 80.1 19.0 147 67-219 257-403 (537)
52 2ond_A Cleavage stimulation fa 98.7 1E-05 3.5E-10 70.1 22.7 180 72-266 35-232 (308)
53 2gw1_A Mitochondrial precursor 98.6 3.9E-07 1.3E-11 83.9 14.4 183 67-265 203-400 (514)
54 4abn_A Tetratricopeptide repea 98.6 8.2E-07 2.8E-11 82.2 16.0 143 70-219 120-283 (474)
55 2ond_A Cleavage stimulation fa 98.6 6.6E-06 2.3E-10 71.3 21.0 182 70-265 81-269 (308)
56 3fp2_A TPR repeat-containing p 98.6 2.2E-06 7.5E-11 79.5 18.1 180 69-265 218-406 (537)
57 4i17_A Hypothetical protein; T 98.6 9.9E-06 3.4E-10 66.5 19.4 130 86-219 5-142 (228)
58 3u4t_A TPR repeat-containing p 98.6 5.3E-06 1.8E-10 69.7 17.9 148 67-219 17-167 (272)
59 3u4t_A TPR repeat-containing p 98.5 7.4E-06 2.5E-10 68.8 18.2 163 89-265 4-170 (272)
60 1xnf_A Lipoprotein NLPI; TPR, 98.5 9.8E-06 3.4E-10 68.0 18.8 148 67-219 57-240 (275)
61 1qqe_A Vesicular transport pro 98.5 3.8E-06 1.3E-10 72.3 15.5 133 88-220 77-225 (292)
62 4i17_A Hypothetical protein; T 98.5 1.5E-05 5E-10 65.5 18.3 137 69-210 23-169 (228)
63 1hh8_A P67PHOX, NCF-2, neutrop 98.5 8.6E-06 2.9E-10 66.0 16.4 125 89-219 7-146 (213)
64 2h6f_A Protein farnesyltransfe 98.5 3.2E-05 1.1E-09 69.4 21.6 177 67-263 111-302 (382)
65 1na0_A Designed protein CTPR3; 98.5 1.8E-05 6.3E-10 57.4 16.8 116 88-207 9-124 (125)
66 3mv2_B Coatomer subunit epsilo 98.5 1.2E-05 4E-10 69.7 17.6 187 72-267 85-283 (310)
67 2vsy_A XCC0866; transferase, g 98.4 1.5E-05 5.1E-10 75.2 18.7 144 71-219 7-153 (568)
68 4abn_A Tetratricopeptide repea 98.4 1.5E-05 5E-10 73.7 18.2 164 85-265 99-286 (474)
69 2ooe_A Cleavage stimulation fa 98.4 3E-05 1E-09 72.4 19.8 179 71-265 304-491 (530)
70 1a17_A Serine/threonine protei 98.4 2.1E-05 7.3E-10 60.6 15.6 128 88-219 13-142 (166)
71 2vyi_A SGTA protein; chaperone 98.3 3.2E-05 1.1E-09 56.6 15.5 119 88-210 12-130 (131)
72 2ooe_A Cleavage stimulation fa 98.3 9.1E-05 3.1E-09 69.1 21.9 180 71-266 256-454 (530)
73 2lni_A Stress-induced-phosphop 98.3 3.5E-05 1.2E-09 56.8 14.1 119 85-208 13-132 (133)
74 3qou_A Protein YBBN; thioredox 98.2 4.6E-05 1.6E-09 65.4 16.2 161 85-262 114-280 (287)
75 3qky_A Outer membrane assembly 98.2 5.2E-05 1.8E-09 63.6 16.1 150 67-219 29-220 (261)
76 3ulq_A Response regulator aspa 98.2 2.3E-05 8E-10 69.7 14.5 153 67-219 117-289 (383)
77 2r5s_A Uncharacterized protein 98.2 1.8E-05 6E-10 62.5 11.6 147 68-219 21-169 (176)
78 1na0_A Designed protein CTPR3; 98.2 5.8E-05 2E-09 54.7 13.7 94 123-219 9-102 (125)
79 2pzi_A Probable serine/threoni 98.2 4.7E-05 1.6E-09 73.6 16.1 147 67-220 405-560 (681)
80 3urz_A Uncharacterized protein 98.2 6.9E-05 2.4E-09 60.9 14.8 119 94-219 60-182 (208)
81 2qfc_A PLCR protein; TPR, HTH, 98.2 0.00033 1.1E-08 59.9 19.8 170 88-263 75-263 (293)
82 1qqe_A Vesicular transport pro 98.2 3.8E-05 1.3E-09 66.0 13.8 169 90-265 39-227 (292)
83 3u3w_A Transcriptional activat 98.1 0.00018 6.2E-09 61.5 17.8 167 91-263 78-263 (293)
84 4ga2_A E3 SUMO-protein ligase 98.1 6.9E-05 2.4E-09 57.6 13.3 117 88-209 31-149 (150)
85 3qou_A Protein YBBN; thioredox 98.1 5.3E-05 1.8E-09 65.0 13.9 149 66-219 130-280 (287)
86 2h6f_A Protein farnesyltransfe 98.1 6.9E-05 2.4E-09 67.2 14.9 127 88-219 97-225 (382)
87 1elr_A TPR2A-domain of HOP; HO 98.1 6.6E-05 2.3E-09 54.9 12.5 114 88-204 4-122 (131)
88 1hh8_A P67PHOX, NCF-2, neutrop 98.1 0.00016 5.3E-09 58.3 15.8 131 70-218 23-167 (213)
89 4a1s_A PINS, partner of inscut 98.1 1.3E-05 4.6E-10 71.6 10.3 192 67-264 62-290 (411)
90 1p5q_A FKBP52, FK506-binding p 98.1 0.00013 4.4E-09 64.2 16.3 128 88-219 147-290 (336)
91 3gw4_A Uncharacterized protein 98.1 6.8E-05 2.3E-09 59.8 13.4 134 86-219 24-172 (203)
92 3u3w_A Transcriptional activat 98.1 9.8E-05 3.3E-09 63.3 15.2 153 67-219 89-262 (293)
93 4gco_A Protein STI-1; structur 98.1 0.00017 5.8E-09 53.7 14.6 106 89-199 14-120 (126)
94 2ifu_A Gamma-SNAP; membrane fu 98.1 3.3E-05 1.1E-09 66.9 11.8 164 88-259 76-254 (307)
95 3sf4_A G-protein-signaling mod 98.1 1E-05 3.6E-10 71.8 8.7 187 71-263 27-253 (406)
96 3ulq_A Response regulator aspa 98.1 3.5E-05 1.2E-09 68.6 12.0 165 88-264 184-366 (383)
97 2qfc_A PLCR protein; TPR, HTH, 98.1 0.00037 1.3E-08 59.6 18.1 153 67-219 89-262 (293)
98 3mv2_B Coatomer subunit epsilo 98.1 0.00021 7E-09 61.9 16.2 146 67-219 114-278 (310)
99 1elw_A TPR1-domain of HOP; HOP 98.1 0.00046 1.6E-08 49.2 16.0 98 88-188 4-101 (118)
100 3gyz_A Chaperone protein IPGC; 98.0 0.00013 4.5E-09 56.3 13.2 102 88-194 36-137 (151)
101 2vsy_A XCC0866; transferase, g 98.0 0.00011 3.8E-09 69.1 15.3 148 101-266 2-157 (568)
102 3q15_A PSP28, response regulat 98.0 0.00087 3E-08 59.4 20.5 153 67-219 115-286 (378)
103 4gco_A Protein STI-1; structur 98.0 0.00019 6.5E-09 53.4 13.7 92 124-219 14-106 (126)
104 3sf4_A G-protein-signaling mod 98.0 6.7E-05 2.3E-09 66.5 13.1 132 88-219 187-332 (406)
105 3q49_B STIP1 homology and U bo 98.0 0.00031 1E-08 52.2 14.8 99 86-187 7-105 (137)
106 3ro3_A PINS homolog, G-protein 98.0 5.9E-05 2E-09 57.2 11.0 132 88-219 9-154 (164)
107 3sz7_A HSC70 cochaperone (SGT) 98.0 0.00032 1.1E-08 54.3 15.3 99 87-188 10-108 (164)
108 3gyz_A Chaperone protein IPGC; 98.0 0.0001 3.5E-09 57.0 12.2 93 123-219 36-129 (151)
109 2c2l_A CHIP, carboxy terminus 98.0 0.00011 3.6E-09 62.9 13.4 98 87-187 3-100 (281)
110 1a17_A Serine/threonine protei 98.0 0.00026 8.8E-09 54.3 14.5 115 68-186 28-144 (166)
111 3urz_A Uncharacterized protein 98.0 0.0003 1E-08 57.0 15.5 163 91-273 7-191 (208)
112 2xm6_A Protein corresponding t 98.0 0.0033 1.1E-07 57.8 24.3 140 67-219 57-212 (490)
113 2e2e_A Formate-dependent nitri 98.0 9.6E-05 3.3E-09 58.0 12.0 112 72-187 29-143 (177)
114 3gw4_A Uncharacterized protein 98.0 3.4E-05 1.2E-09 61.6 9.4 160 98-264 2-174 (203)
115 3ro2_A PINS homolog, G-protein 98.0 2.9E-05 9.8E-10 66.6 9.5 192 67-264 19-250 (338)
116 2kck_A TPR repeat; tetratricop 98.0 0.00012 4E-09 52.0 11.3 95 90-187 8-105 (112)
117 2e2e_A Formate-dependent nitri 98.0 0.00012 4.3E-09 57.3 12.4 116 99-219 21-140 (177)
118 3upv_A Heat shock protein STI1 98.0 0.00047 1.6E-08 50.6 14.9 98 88-188 4-101 (126)
119 3q15_A PSP28, response regulat 98.0 0.00015 5.2E-09 64.3 14.3 164 88-264 182-363 (378)
120 3q49_B STIP1 homology and U bo 98.0 0.00035 1.2E-08 51.9 14.1 96 121-219 7-102 (137)
121 3qky_A Outer membrane assembly 97.9 0.0005 1.7E-08 57.5 16.6 166 86-265 13-223 (261)
122 2dba_A Smooth muscle cell asso 97.9 0.00073 2.5E-08 50.5 15.8 99 86-188 26-128 (148)
123 2vgx_A Chaperone SYCD; alterna 97.9 0.00028 9.5E-09 54.1 13.4 97 88-187 21-117 (148)
124 2xm6_A Protein corresponding t 97.9 0.0052 1.8E-07 56.4 24.4 141 66-219 92-248 (490)
125 2yhc_A BAMD, UPF0169 lipoprote 97.9 0.00039 1.3E-08 57.0 15.2 167 88-267 4-214 (225)
126 2lni_A Stress-induced-phosphop 97.9 0.00021 7.2E-09 52.4 12.3 97 120-219 13-109 (133)
127 2fbn_A 70 kDa peptidylprolyl i 97.9 0.00051 1.7E-08 54.9 15.4 122 89-214 39-176 (198)
128 2xcb_A PCRH, regulatory protei 97.9 0.00033 1.1E-08 52.9 13.5 98 88-188 18-115 (142)
129 3ro2_A PINS homolog, G-protein 97.9 7E-05 2.4E-09 64.1 10.7 132 88-219 183-328 (338)
130 2yhc_A BAMD, UPF0169 lipoprote 97.9 0.0013 4.6E-08 53.7 18.1 149 68-220 19-210 (225)
131 3rjv_A Putative SEL1 repeat pr 97.9 0.00046 1.6E-08 56.1 15.0 178 72-272 5-203 (212)
132 1xi4_A Clathrin heavy chain; a 97.9 0.00049 1.7E-08 70.3 17.6 192 87-298 1133-1341(1630)
133 2vgx_A Chaperone SYCD; alterna 97.9 0.00026 9E-09 54.2 12.5 94 122-219 20-114 (148)
134 1elw_A TPR1-domain of HOP; HOP 97.9 0.00043 1.5E-08 49.4 13.0 95 122-219 3-97 (118)
135 4a1s_A PINS, partner of inscut 97.9 4.6E-05 1.6E-09 68.0 9.1 170 89-264 49-250 (411)
136 3upv_A Heat shock protein STI1 97.9 0.00045 1.5E-08 50.7 13.1 93 123-219 4-97 (126)
137 3sz7_A HSC70 cochaperone (SGT) 97.8 0.00037 1.3E-08 53.9 13.0 94 122-219 10-104 (164)
138 2kck_A TPR repeat; tetratricop 97.8 0.00018 6E-09 51.0 10.4 95 123-219 6-102 (112)
139 2vyi_A SGTA protein; chaperone 97.8 0.0005 1.7E-08 50.0 13.1 95 122-219 11-105 (131)
140 2r5s_A Uncharacterized protein 97.8 0.00022 7.4E-09 56.1 11.7 155 91-264 9-171 (176)
141 3n71_A Histone lysine methyltr 97.8 0.00013 4.5E-09 67.5 11.8 124 96-219 317-460 (490)
142 2xcb_A PCRH, regulatory protei 97.8 0.00038 1.3E-08 52.6 12.6 94 123-219 18-111 (142)
143 1hz4_A MALT regulatory protein 97.8 0.0014 4.6E-08 57.8 17.5 154 66-219 27-199 (373)
144 1wao_1 Serine/threonine protei 97.8 0.0003 1E-08 65.0 13.6 119 95-218 13-134 (477)
145 4ga2_A E3 SUMO-protein ligase 97.8 4.5E-05 1.5E-09 58.7 6.8 117 97-219 6-125 (150)
146 4gcn_A Protein STI-1; structur 97.8 0.001 3.4E-08 49.4 14.0 106 89-197 9-119 (127)
147 4gcn_A Protein STI-1; structur 97.8 0.00038 1.3E-08 51.7 11.6 94 124-219 9-108 (127)
148 1elr_A TPR2A-domain of HOP; HO 97.8 0.00067 2.3E-08 49.3 12.8 95 123-219 4-104 (131)
149 1hz4_A MALT regulatory protein 97.7 0.0015 5.2E-08 57.4 16.7 192 67-264 107-320 (373)
150 2dba_A Smooth muscle cell asso 97.7 0.0012 4.2E-08 49.2 14.0 96 121-219 26-124 (148)
151 2ifu_A Gamma-SNAP; membrane fu 97.7 0.00042 1.4E-08 59.8 12.2 169 89-264 37-222 (307)
152 3rjv_A Putative SEL1 repeat pr 97.7 0.0047 1.6E-07 50.0 17.8 144 67-219 32-193 (212)
153 2pzi_A Probable serine/threoni 97.7 0.00051 1.7E-08 66.3 13.5 148 67-221 447-603 (681)
154 3k9i_A BH0479 protein; putativ 97.7 0.00011 3.9E-09 53.6 7.0 87 100-188 2-90 (117)
155 4g1t_A Interferon-induced prot 97.7 0.0014 4.8E-08 59.5 15.7 145 71-219 231-397 (472)
156 1p5q_A FKBP52, FK506-binding p 97.7 0.0014 4.7E-08 57.5 15.0 115 69-186 163-292 (336)
157 1hxi_A PEX5, peroxisome target 97.6 0.00086 2.9E-08 49.3 11.6 92 93-187 22-113 (121)
158 3n71_A Histone lysine methyltr 97.6 0.00013 4.3E-09 67.7 8.4 100 88-187 351-463 (490)
159 2xev_A YBGF; tetratricopeptide 97.6 0.0035 1.2E-07 45.7 14.9 99 93-194 7-109 (129)
160 1kt0_A FKBP51, 51 kDa FK506-bi 97.6 0.0011 3.9E-08 60.6 14.6 125 88-216 268-407 (457)
161 4f3v_A ESX-1 secretion system 97.6 0.00067 2.3E-08 57.9 11.1 125 91-220 105-234 (282)
162 1xi4_A Clathrin heavy chain; a 97.5 0.0049 1.7E-07 63.2 18.0 141 88-263 1105-1247(1630)
163 2l6j_A TPR repeat-containing p 97.5 0.00026 8.7E-09 50.4 6.8 94 122-219 3-103 (111)
164 1hxi_A PEX5, peroxisome target 97.5 0.0018 6.1E-08 47.6 11.5 90 126-219 20-110 (121)
165 4g1t_A Interferon-induced prot 97.5 0.0054 1.8E-07 55.5 17.1 206 42-266 51-276 (472)
166 1ihg_A Cyclophilin 40; ppiase 97.5 0.002 6.9E-08 57.3 13.8 124 89-216 224-363 (370)
167 3k9i_A BH0479 protein; putativ 97.4 0.00052 1.8E-08 49.9 7.8 83 135-219 2-86 (117)
168 2xev_A YBGF; tetratricopeptide 97.4 0.0042 1.4E-07 45.2 12.9 90 128-219 7-101 (129)
169 4e6h_A MRNA 3'-END-processing 97.4 0.0042 1.4E-07 59.8 15.8 182 74-266 365-570 (679)
170 2c2l_A CHIP, carboxy terminus 97.4 0.0039 1.3E-07 53.0 13.9 94 122-219 3-97 (281)
171 2fbn_A 70 kDa peptidylprolyl i 97.4 0.0032 1.1E-07 50.1 12.5 120 67-189 52-187 (198)
172 3rkv_A Putative peptidylprolyl 97.4 0.0032 1.1E-07 48.4 12.0 98 88-187 11-125 (162)
173 3ro3_A PINS homolog, G-protein 97.3 0.0012 4E-08 49.8 9.1 99 89-187 50-157 (164)
174 3rkv_A Putative peptidylprolyl 97.3 0.0051 1.8E-07 47.2 12.9 94 125-219 13-122 (162)
175 1wao_1 Serine/threonine protei 97.3 0.0015 5.1E-08 60.2 10.6 118 51-183 15-134 (477)
176 3qww_A SET and MYND domain-con 97.2 0.0018 6E-08 59.0 9.9 86 101-186 311-409 (433)
177 3qwp_A SET and MYND domain-con 97.2 0.0036 1.2E-07 56.9 11.9 93 94-186 293-398 (429)
178 3qww_A SET and MYND domain-con 97.2 0.00092 3.1E-08 60.8 7.7 85 135-219 310-407 (433)
179 4b4t_Q 26S proteasome regulato 97.1 0.02 6.7E-07 51.1 16.5 130 90-219 57-200 (434)
180 2hr2_A Hypothetical protein; a 97.0 0.024 8.1E-07 43.9 13.5 111 89-199 12-147 (159)
181 2if4_A ATFKBP42; FKBP-like, al 97.0 0.0026 8.8E-08 55.8 8.9 125 89-219 180-324 (338)
182 3e4b_A ALGK; tetratricopeptide 97.0 0.093 3.2E-06 47.7 19.6 187 68-279 194-400 (452)
183 3e4b_A ALGK; tetratricopeptide 97.0 0.1 3.5E-06 47.4 19.8 167 89-279 177-364 (452)
184 1na3_A Designed protein CTPR2; 97.0 0.017 5.8E-07 38.9 11.3 62 90-152 11-72 (91)
185 2l6j_A TPR repeat-containing p 96.9 0.0065 2.2E-07 42.8 9.2 93 87-182 3-101 (111)
186 3qwp_A SET and MYND domain-con 96.9 0.0065 2.2E-07 55.2 11.1 91 129-219 293-396 (429)
187 1na3_A Designed protein CTPR2; 96.9 0.019 6.6E-07 38.6 11.3 82 123-208 9-91 (91)
188 2kat_A Uncharacterized protein 96.9 0.011 3.7E-07 42.3 10.3 64 87-151 18-81 (115)
189 2hr2_A Hypothetical protein; a 96.9 0.023 7.8E-07 44.0 12.3 96 124-219 12-127 (159)
190 4b4t_Q 26S proteasome regulato 96.9 0.018 6.1E-07 51.4 13.5 164 95-264 11-202 (434)
191 2kat_A Uncharacterized protein 96.8 0.017 5.7E-07 41.3 10.9 98 106-206 3-101 (115)
192 1kt0_A FKBP51, 51 kDa FK506-bi 96.8 0.02 6.8E-07 52.3 13.1 97 88-187 317-414 (457)
193 1klx_A Cysteine rich protein B 96.7 0.044 1.5E-06 41.0 12.9 84 98-188 35-126 (138)
194 1ihg_A Cyclophilin 40; ppiase 96.7 0.017 5.8E-07 51.3 12.1 94 124-219 224-332 (370)
195 3ma5_A Tetratricopeptide repea 96.7 0.012 4E-07 41.3 8.8 62 123-186 7-68 (100)
196 4f3v_A ESX-1 secretion system 96.7 0.038 1.3E-06 47.0 13.3 122 67-193 116-240 (282)
197 3dra_A Protein farnesyltransfe 96.6 0.09 3.1E-06 45.3 15.1 147 69-219 126-283 (306)
198 4e6h_A MRNA 3'-END-processing 96.5 0.059 2E-06 51.8 15.0 151 67-220 392-567 (679)
199 3ma5_A Tetratricopeptide repea 96.5 0.016 5.5E-07 40.6 8.4 65 87-152 6-70 (100)
200 2if4_A ATFKBP42; FKBP-like, al 96.2 0.034 1.2E-06 48.5 10.7 94 123-220 179-290 (338)
201 2uy1_A Cleavage stimulation fa 96.1 0.72 2.5E-05 42.4 19.7 170 71-264 197-411 (493)
202 1klx_A Cysteine rich protein B 96.1 0.29 1E-05 36.3 15.5 106 102-219 9-122 (138)
203 1dce_A Protein (RAB geranylger 96.0 0.37 1.3E-05 45.2 17.1 154 61-219 37-217 (567)
204 3ly7_A Transcriptional activat 95.7 0.14 4.8E-06 45.2 12.2 151 82-236 188-355 (372)
205 2kc7_A BFR218_protein; tetratr 95.7 0.1 3.4E-06 35.8 9.4 55 131-187 8-63 (99)
206 3mkq_A Coatomer beta'-subunit; 95.5 0.17 5.9E-06 49.0 13.5 99 99-219 663-761 (814)
207 1zu2_A Mitochondrial import re 95.5 0.068 2.3E-06 41.2 8.2 98 100-202 14-132 (158)
208 2kc7_A BFR218_protein; tetratr 95.1 0.43 1.5E-05 32.4 11.1 60 94-154 6-66 (99)
209 3dra_A Protein farnesyltransfe 95.1 1.4 4.8E-05 37.8 18.8 153 62-219 42-211 (306)
210 1zu2_A Mitochondrial import re 95.0 0.05 1.7E-06 42.0 6.2 91 134-228 13-128 (158)
211 3q7a_A Farnesyltransferase alp 95.0 1.7 5.9E-05 38.0 17.9 157 58-219 59-233 (349)
212 2uy1_A Cleavage stimulation fa 94.6 0.67 2.3E-05 42.6 14.0 121 89-219 287-409 (493)
213 3mkq_B Coatomer subunit alpha; 94.3 1.5 5E-05 34.3 14.8 100 98-219 15-114 (177)
214 1pc2_A Mitochondria fission pr 93.8 0.7 2.4E-05 35.2 10.2 86 104-193 14-103 (152)
215 2v5f_A Prolyl 4-hydroxylase su 93.8 0.59 2E-05 32.7 9.4 65 88-152 5-75 (104)
216 2v5f_A Prolyl 4-hydroxylase su 93.2 1.1 3.7E-05 31.2 9.9 72 121-194 3-79 (104)
217 2ff4_A Probable regulatory pro 92.4 0.8 2.7E-05 40.7 10.0 108 87-196 111-247 (388)
218 3bee_A Putative YFRE protein; 92.2 1.6 5.3E-05 30.0 9.3 65 122-188 5-72 (93)
219 3mkq_A Coatomer beta'-subunit; 92.1 1.8 6.1E-05 41.7 12.9 84 86-185 679-762 (814)
220 3dss_A Geranylgeranyl transfer 91.6 6.2 0.00021 34.1 17.7 144 70-219 91-263 (331)
221 3dss_A Geranylgeranyl transfer 91.2 6.9 0.00023 33.8 18.3 151 64-219 41-218 (331)
222 3bee_A Putative YFRE protein; 91.0 2.4 8.1E-05 29.0 9.3 69 85-154 3-74 (93)
223 3ly7_A Transcriptional activat 90.8 8.1 0.00028 33.9 15.2 74 120-198 274-347 (372)
224 1dce_A Protein (RAB geranylger 90.6 7.6 0.00026 36.2 15.1 138 69-212 89-244 (567)
225 1pc2_A Mitochondria fission pr 90.3 3.3 0.00011 31.4 10.0 79 73-153 18-101 (152)
226 3mkq_B Coatomer subunit alpha; 90.3 5.4 0.00018 31.1 13.9 132 57-221 11-142 (177)
227 1v54_E Cytochrome C oxidase po 90.1 2 7E-05 30.1 7.9 43 73-115 30-72 (109)
228 2p58_C Putative type III secre 89.0 3.1 0.00011 29.1 8.1 83 172-270 20-102 (116)
229 3q7a_A Farnesyltransferase alp 88.6 12 0.0004 32.6 19.6 137 68-210 104-258 (349)
230 4gns_B Protein CSD3, chitin bi 88.5 7.8 0.00027 37.5 13.5 128 92-221 252-398 (754)
231 1nzn_A CGI-135 protein, fissio 88.1 5.7 0.00019 29.0 9.6 83 103-187 16-102 (126)
232 2uwj_G Type III export protein 87.4 3 0.0001 29.1 7.2 83 172-270 19-101 (115)
233 2ff4_A Probable regulatory pro 87.1 6 0.00021 34.9 11.2 67 90-157 173-244 (388)
234 3u64_A Protein TP_0956; tetrat 85.4 10 0.00034 32.2 11.0 93 104-199 179-282 (301)
235 2y69_E Cytochrome C oxidase su 84.4 6.8 0.00023 29.1 8.2 44 72-115 72-115 (152)
236 1wy6_A Hypothetical protein ST 84.4 8.3 0.00028 28.8 8.7 85 100-191 73-157 (172)
237 1v54_E Cytochrome C oxidase po 84.4 8.5 0.00029 27.0 8.3 64 103-168 25-88 (109)
238 4h7y_A Dual specificity protei 83.3 13 0.00044 28.2 11.0 113 87-203 12-137 (161)
239 2nsz_A Programmed cell death p 81.9 6.8 0.00023 28.7 7.7 63 91-154 10-74 (129)
240 3u64_A Protein TP_0956; tetrat 80.6 18 0.00061 30.7 10.6 82 71-154 181-271 (301)
241 2ion_A PDCD4, programmed cell 77.4 6.1 0.00021 29.9 6.3 64 90-154 11-76 (152)
242 2y69_E Cytochrome C oxidase su 76.3 19 0.00066 26.7 8.3 78 89-168 52-131 (152)
243 4b4t_R RPN7, 26S proteasome re 73.9 48 0.0016 29.4 12.7 98 89-188 132-237 (429)
244 1wy6_A Hypothetical protein ST 72.5 28 0.00094 26.1 13.6 79 134-219 72-150 (172)
245 4b4t_P 26S proteasome regulato 71.1 58 0.002 29.1 17.8 137 83-219 51-243 (445)
246 3ffl_A Anaphase-promoting comp 71.0 20 0.00067 27.5 7.7 128 81-222 11-150 (167)
247 2uwj_G Type III export protein 70.6 24 0.00083 24.6 7.6 79 102-189 20-98 (115)
248 4fke_A Aminopeptidase N; zinc 70.4 88 0.003 30.9 15.7 188 91-295 689-893 (909)
249 2p58_C Putative type III secre 70.0 25 0.00086 24.6 8.4 79 102-189 21-99 (116)
250 3txn_A 26S proteasome regulato 69.7 40 0.0014 29.8 10.5 168 89-261 20-205 (394)
251 3esl_A Checkpoint serine/threo 69.6 40 0.0014 26.7 9.6 58 136-193 92-149 (202)
252 1nzn_A CGI-135 protein, fissio 69.3 21 0.00073 25.9 7.3 88 129-219 7-99 (126)
253 2nsz_A Programmed cell death p 67.9 19 0.00066 26.2 6.9 79 125-205 9-89 (129)
254 4b4t_R RPN7, 26S proteasome re 67.8 20 0.00068 32.0 8.4 114 104-219 110-233 (429)
255 4h7y_A Dual specificity protei 66.6 40 0.0014 25.5 8.7 95 122-219 12-119 (161)
256 1zbp_A Hypothetical protein VP 65.9 17 0.0006 30.2 6.9 112 96-218 5-124 (273)
257 4a1g_A Mitotic checkpoint seri 63.3 29 0.00099 26.1 7.2 53 140-192 82-134 (152)
258 2wvi_A Mitotic checkpoint seri 60.7 24 0.00081 27.0 6.4 53 141-193 78-130 (164)
259 4fhn_B Nucleoporin NUP120; pro 59.9 1.5E+02 0.0052 30.0 14.8 126 87-215 841-992 (1139)
260 2ion_A PDCD4, programmed cell 59.4 19 0.00064 27.2 5.6 79 125-205 11-91 (152)
261 3eiq_C Programmed cell death p 57.1 32 0.0011 29.9 7.4 82 124-207 218-301 (358)
262 4aez_C MAD3, mitotic spindle c 52.7 30 0.001 27.9 6.0 53 140-192 131-183 (223)
263 1zbp_A Hypothetical protein VP 52.0 82 0.0028 26.2 8.6 54 132-187 6-59 (273)
264 4gns_B Protein CSD3, chitin bi 51.7 1.7E+02 0.006 28.2 14.6 116 69-186 265-398 (754)
265 2zu6_B Programmed cell death p 51.5 33 0.0011 29.1 6.4 78 125-204 168-247 (307)
266 3esl_A Checkpoint serine/threo 51.0 81 0.0028 24.9 8.1 58 161-219 82-140 (202)
267 2xig_A Ferric uptake regulatio 48.8 79 0.0027 23.4 7.8 66 145-212 14-79 (150)
268 1ug3_A EIF4GI, eukaryotic prot 47.8 65 0.0022 27.6 7.9 129 90-219 13-166 (339)
269 3txn_A 26S proteasome regulato 47.0 1.5E+02 0.0051 26.1 11.6 93 93-185 104-207 (394)
270 4fhn_B Nucleoporin NUP120; pro 47.0 1.2E+02 0.0042 30.7 10.9 126 89-217 900-1043(1139)
271 2xig_A Ferric uptake regulatio 46.7 69 0.0024 23.7 7.0 59 79-138 18-76 (150)
272 2fu4_A Ferric uptake regulatio 46.6 56 0.0019 21.0 6.4 59 79-138 8-67 (83)
273 2fe3_A Peroxide operon regulat 46.4 84 0.0029 23.0 7.6 17 136-152 34-50 (145)
274 2wpv_A GET4, UPF0363 protein Y 45.0 1.4E+02 0.0049 25.2 13.1 159 89-263 34-214 (312)
275 2fe3_A Peroxide operon regulat 45.0 81 0.0028 23.1 7.1 65 146-212 10-74 (145)
276 1mzb_A Ferric uptake regulatio 44.8 74 0.0025 23.0 6.8 60 79-139 9-69 (136)
277 1wgl_A TOLL-interacting protei 41.5 45 0.0015 20.6 4.2 36 237-272 23-58 (59)
278 2b7e_A PRE-mRNA processing pro 40.8 18 0.00062 22.4 2.3 31 140-171 3-34 (59)
279 1wdy_A 2-5A-dependent ribonucl 40.4 64 0.0022 25.7 6.5 133 74-219 19-170 (285)
280 2d2s_A Exocyst complex compone 40.0 1.3E+02 0.0044 24.3 8.1 22 94-115 24-45 (235)
281 2w57_A Ferric uptake regulatio 39.8 82 0.0028 23.3 6.4 60 79-139 8-68 (150)
282 1mzb_A Ferric uptake regulatio 38.6 80 0.0027 22.8 6.1 63 148-212 8-71 (136)
283 3eyy_A Putative iron uptake re 38.0 72 0.0025 23.4 5.8 65 145-212 6-70 (145)
284 3vu7_H DNA repair protein REV1 34.1 1.1E+02 0.0036 22.1 5.9 43 73-115 42-87 (124)
285 4fjo_A DNA repair protein REV1 33.4 1.1E+02 0.0039 20.8 6.4 46 70-115 12-60 (97)
286 3eyy_A Putative iron uptake re 33.1 1.1E+02 0.0038 22.4 6.2 14 105-118 34-47 (145)
287 2w57_A Ferric uptake regulatio 32.6 96 0.0033 22.9 5.8 65 146-212 5-70 (150)
288 2fu4_A Ferric uptake regulatio 32.0 1E+02 0.0034 19.7 5.8 62 148-211 7-69 (83)
289 3ygs_P Procaspase 9; apoptosis 32.0 79 0.0027 21.4 4.8 36 138-178 52-87 (97)
290 4b4t_P 26S proteasome regulato 31.7 2.7E+02 0.0093 24.6 12.4 96 91-186 140-245 (445)
291 3ygs_P Procaspase 9; apoptosis 31.5 1.1E+02 0.0037 20.8 5.4 66 144-216 25-90 (97)
292 2keb_A DNA polymerase subunit 30.8 1.3E+02 0.0045 20.7 7.4 57 72-129 28-88 (101)
293 4ets_A Ferric uptake regulatio 30.6 1.1E+02 0.0037 23.0 5.8 71 140-212 14-87 (162)
294 1k1a_A B-cell lymphoma 3-encod 30.4 1.8E+02 0.0063 22.3 8.8 121 94-219 12-138 (241)
295 1ug3_A EIF4GI, eukaryotic prot 30.4 45 0.0015 28.7 4.0 65 126-192 14-79 (339)
296 3o48_A Mitochondria fission 1 30.2 1.6E+02 0.0055 21.5 10.8 66 121-187 38-106 (134)
297 4ets_A Ferric uptake regulatio 29.8 1.7E+02 0.0059 21.8 6.9 37 115-152 25-61 (162)
298 3eiq_C Programmed cell death p 29.4 1.3E+02 0.0044 26.1 6.7 109 90-212 219-330 (358)
299 2f6m_A Suppressor protein STP2 29.2 96 0.0033 19.5 4.3 44 126-171 5-48 (65)
300 3mwm_A ZUR, putative metal upt 28.5 88 0.003 22.7 4.9 62 149-212 5-66 (139)
301 2zu6_B Programmed cell death p 28.4 1E+02 0.0036 26.0 5.9 108 90-211 168-278 (307)
302 2p1h_A APAF-1, apoptotic prote 28.1 1.3E+02 0.0046 19.9 7.3 61 144-213 26-86 (94)
303 2o03_A Probable zinc uptake re 27.6 1E+02 0.0036 22.0 5.1 51 162-212 13-63 (131)
304 2of5_H Leucine-rich repeat and 27.4 1.4E+02 0.0047 21.1 5.6 50 176-227 54-104 (118)
305 1bd8_A P19INK4D CDK4/6 inhibit 27.3 67 0.0023 23.0 4.1 113 94-219 5-123 (156)
306 2yru_A Steroid receptor RNA ac 26.7 1.2E+02 0.004 21.6 5.0 41 75-115 48-88 (118)
307 2wpv_A GET4, UPF0363 protein Y 25.9 3E+02 0.01 23.2 9.9 16 204-219 198-213 (312)
308 1fad_A Protein (FADD protein); 23.0 93 0.0032 21.0 3.8 24 125-148 73-96 (99)
309 2yru_A Steroid receptor RNA ac 22.7 2.1E+02 0.0072 20.3 6.0 46 108-153 46-91 (118)
310 1bd8_A P19INK4D CDK4/6 inhibit 22.6 2.1E+02 0.0071 20.2 6.6 115 128-262 4-123 (156)
311 1y8m_A FIS1; mitochondria, unk 22.5 2.4E+02 0.0081 20.9 12.8 67 120-187 36-105 (144)
312 1wty_A Hypothetical protein TT 22.4 2E+02 0.007 20.1 6.3 73 73-152 8-81 (119)
313 1k1a_A B-cell lymphoma 3-encod 22.2 76 0.0026 24.6 3.8 144 67-219 20-172 (241)
314 3ffl_A Anaphase-promoting comp 21.9 2.6E+02 0.0091 21.2 10.3 88 90-192 65-155 (167)
315 2rg8_A Programmed cell death p 21.9 1.5E+02 0.0051 22.4 5.1 25 91-115 13-37 (165)
316 3l6a_A Eukaryotic translation 21.5 1.7E+02 0.0058 25.4 6.0 66 89-154 13-79 (364)
317 3f3f_C Nucleoporin NUP85; stru 21.2 2.1E+02 0.0072 26.5 6.7 72 138-213 496-568 (570)
318 3bu8_A Telomeric repeat-bindin 20.9 2.4E+02 0.0081 22.6 6.1 49 104-152 88-143 (235)
319 2hpi_A DNA polymerase III alph 20.5 5.6E+02 0.019 26.3 10.2 64 126-191 781-867 (1220)
320 2of5_H Leucine-rich repeat and 20.4 1.9E+02 0.0065 20.3 5.1 43 69-112 53-95 (118)
321 1wdy_A 2-5A-dependent ribonucl 20.4 2.6E+02 0.0089 21.9 6.9 115 92-219 6-127 (285)
No 1
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=100.00 E-value=7.5e-33 Score=259.00 Aligned_cols=199 Identities=12% Similarity=0.080 Sum_probs=171.3
Q ss_pred HHHHHHHHHHcCCCCCH-HHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCC---------HHH
Q 021583 72 VYGALDSFIAWELEFPL-ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGR---------LDE 141 (310)
Q Consensus 72 ~~~~~~~m~~~~~~p~~-~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~---------~~~ 141 (310)
+..+.+++.+.+..... ..++.+|.+|++.|++++|.++|++|.+.|++||.+|||+||++|++.+. +++
T Consensus 9 ~e~L~~~~~~k~~~~spe~~l~~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~ 88 (501)
T 4g26_A 9 SENLSRKAKKKAIQQSPEALLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSR 88 (501)
T ss_dssp ---------------CHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHH
T ss_pred HHHHHHHHHHhcccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHH
Confidence 34556677777776654 45889999999999999999999999999999999999999999998765 688
Q ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhCC
Q 021583 142 AEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYP 221 (310)
Q Consensus 142 A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~~ 221 (310)
|.++|++|.+.|+ .||.+|||+||.+|++.|++++|+++|++|.+.|+.||..||++||.+|++.|++++|.++|+
T Consensus 89 A~~lf~~M~~~G~-~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~--- 164 (501)
T 4g26_A 89 GFDIFKQMIVDKV-VPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDA--- 164 (501)
T ss_dssp HHHHHHHHHHTTC-CCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHH---
T ss_pred HHHHHHHHHHhCC-CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHH---
Confidence 9999999999999 488899999999999999999999999999999999999999999999999999999999954
Q ss_pred CCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhcCCCCCchhhhhhhhhh
Q 021583 222 PPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNESSEEPEAAANLNESLEE 281 (310)
Q Consensus 222 p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~ 281 (310)
.|.+.|+.||..+|++||++ +.|+.++|.+++++|...++.|+..||+.++..
T Consensus 165 -------~M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps~~T~~~l~~~ 219 (501)
T 4g26_A 165 -------HMVESEVVPEEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVSKSTFDMIEEW 219 (501)
T ss_dssp -------HHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBCHHHHHHHHHH
T ss_pred -------HHHhcCCCCCHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcCHHHHHHHHHH
Confidence 47788999999999999999 999999999999999999999999999998843
No 2
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=100.00 E-value=8.9e-32 Score=251.70 Aligned_cols=189 Identities=11% Similarity=0.057 Sum_probs=168.6
Q ss_pred CCCchHHHHHHHhcCcCchHhHHHHHHhcCCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCC---------HHHH
Q 021583 37 PRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKD---------WKRI 107 (310)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~---------~~~a 107 (310)
...|.. ..+..+..+++.|++.+| .++|++|.+.|++||..|||+||.+|++.+. +++|
T Consensus 22 ~~spe~-~l~~~id~c~k~G~~~~A-----------~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A 89 (501)
T 4g26_A 22 QQSPEA-LLKQKLDMCSKKGDVLEA-----------LRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRG 89 (501)
T ss_dssp --CHHH-HHHHHHHHTTTSCCHHHH-----------HHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHH
T ss_pred cCCCHH-HHHHHHHHHHhCCCHHHH-----------HHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHH
Confidence 334444 345567888888888888 8999999999999999999999999998765 7889
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 021583 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEE 187 (310)
Q Consensus 108 ~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~ 187 (310)
.++|++|.+.|+.||..||++||++|++.|++++|+++|++|.+.|+ .|+.+|||+||.+||+.|++++|.++|++|.+
T Consensus 90 ~~lf~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~-~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~ 168 (501)
T 4g26_A 90 FDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGI-QPRLRSYGPALFGFCRKGDADKAYEVDAHMVE 168 (501)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTC-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCC-CCccceehHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999 48889999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccchheeccCcccCChhhhhHhhhc
Q 021583 188 LGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSA 248 (310)
Q Consensus 188 ~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~ 248 (310)
.|+.||..||++||++|++.|++++|.++|++ |+..+..|+..+|+.+++.
T Consensus 169 ~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~~----------Mr~~g~~ps~~T~~~l~~~ 219 (501)
T 4g26_A 169 SEVVPEEPELAALLKVSMDTKNADKVYKTLQR----------LRDLVRQVSKSTFDMIEEW 219 (501)
T ss_dssp TTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHH----------HHHHTSSBCHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHhhCCCHHHHHHHHHH----------HHHhCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999665 5556666777777666654
No 3
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=99.89 E-value=2.8e-23 Score=201.67 Aligned_cols=136 Identities=10% Similarity=0.068 Sum_probs=123.3
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHH---HCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHH
Q 021583 87 PLITVKKALKTLENEKDWKRIIQVTKWML---SKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163 (310)
Q Consensus 87 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~---~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~ 163 (310)
-..|||+||.+||+.|++++|.++|++|. ..|+.||++|||+||++||+.|++++|.++|++|.+.|+. ||.+|||
T Consensus 126 ~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~-PDvvTYn 204 (1134)
T 3spa_A 126 QQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLT-PDLLSYA 204 (1134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCC-CCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCC-CcHHHHH
Confidence 35699999999999999999999998886 4589999999999999999999999999999999999994 8999999
Q ss_pred HHHHHHHHcCCH-HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhCCCC
Q 021583 164 KMISIYYNRGMH-EKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPP 223 (310)
Q Consensus 164 ~li~~~~~~g~~-~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~~p~ 223 (310)
+||++||+.|+. ++|.++|++|.+.|+.||..||+++++++.+.+-++.+.++..++.|.
T Consensus 205 tLI~glcK~G~~~e~A~~Ll~EM~~kG~~PD~vtY~~ll~~~eR~~vL~~Vrkv~P~f~p~ 265 (1134)
T 3spa_A 205 AALQCMGRQDQDAGTIERCLEQMSQEGLKLQALFTAVLLSEEDRATVLKAVHKVKPTFSLP 265 (1134)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHTCCSHHHHHHSCCCHHHHHHHHHHHGGGCCCCCCC
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHcCCCCChhhcccccChhhHHHHHHHHHHhCcccCCC
Confidence 999999999985 789999999999999999999999999998887777766665555443
No 4
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=99.83 E-value=1e-20 Score=183.94 Aligned_cols=127 Identities=9% Similarity=0.058 Sum_probs=112.1
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHh---cCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHH
Q 021583 122 TMGTYFLLLNALAEDGRLDEAEELWTKIFL---DHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVS 198 (310)
Q Consensus 122 ~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~---~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~ 198 (310)
-..|||+||++||++|++++|.++|++|.+ .|+ .+|.+|||+||+|||+.|++++|.++|++|.+.|+.||..|||
T Consensus 126 ~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~-~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYn 204 (1134)
T 3spa_A 126 QQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRK-LLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYA 204 (1134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHT-TCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCC-CCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHH
Confidence 357999999999999999999999988764 477 4888999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCH-HHHHHHHHhCCCCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhh
Q 021583 199 MMGNAFQKLGML-DKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETT 259 (310)
Q Consensus 199 ~li~~~~~~g~~-~~a~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~ 259 (310)
+||++|++.|+. ++|.++| ..|.+.|+.||..+|++++.+ +.+-+..+.+.
T Consensus 205 tLI~glcK~G~~~e~A~~Ll----------~EM~~kG~~PD~vtY~~ll~~~eR~~vL~~Vrkv 258 (1134)
T 3spa_A 205 AALQCMGRQDQDAGTIERCL----------EQMSQEGLKLQALFTAVLLSEEDRATVLKAVHKV 258 (1134)
T ss_dssp HHHHHHHHHTCCHHHHHHHH----------HHHHHHTCCSHHHHHHSCCCHHHHHHHHHHHGGG
T ss_pred HHHHHHHhCCCcHHHHHHHH----------HHHHHcCCCCChhhcccccChhhHHHHHHHHHHh
Confidence 999999999985 7888995 458888999999999999988 55444444444
No 5
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.68 E-value=5e-15 Score=140.41 Aligned_cols=243 Identities=8% Similarity=-0.093 Sum_probs=174.3
Q ss_pred cccchhhhhccCCCCCCchHHHHHHHhcCcCchHhHHHHHHhcC-----------------------CcHHHHHHHHHHH
Q 021583 23 NARSLVVCAARGPRPRYPRVWKARKRIGTISKSAKLVTCIKGLS-----------------------NVKEEVYGALDSF 79 (310)
Q Consensus 23 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------------------~~~~~~~~~~~~m 79 (310)
.+..+.++...-.. .++...+......+.+.+++.+++..+. +..+++..+++++
T Consensus 288 ~~~A~~~~~~~~~~--~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~ 365 (597)
T 2xpi_A 288 LRRAEDYLSSINGL--EKSSDLLLCKADTLFVRSRFIDVLAITTKILEIDPYNLDVYPLHLASLHESGEKNKLYLISNDL 365 (597)
T ss_dssp HHHHHHHHHTSTTG--GGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcC--CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 34444444443332 2456666666666666666666653332 3445566777777
Q ss_pred HHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChH
Q 021583 80 IAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR 159 (310)
Q Consensus 80 ~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~ 159 (310)
.+.. +.+..+|+.+...|.+.|++++|.++|+.+.+.. ..+..+|+.++.+|.+.|++++|.++|+++.+.+- .+.
T Consensus 366 ~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~--~~~ 441 (597)
T 2xpi_A 366 VDRH-PEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMD-PQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQ--GTH 441 (597)
T ss_dssp HHHC-TTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTT--TCS
T ss_pred HhhC-cccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc--cch
Confidence 6443 4567888888889999999999999998887642 34578888999999999999999999998887643 455
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccchheeccCcccCC-
Q 021583 160 IFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIP- 238 (310)
Q Consensus 160 ~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~~~~~~~~~~~~- 238 (310)
.+|+.+..+|.+.|++++|.++|+.|.+.. +.+..+|+.+..+|.+.|++++|.++|+++.. .....+..++
T Consensus 442 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~------~~~~~~~~p~~ 514 (597)
T 2xpi_A 442 LPYLFLGMQHMQLGNILLANEYLQSSYALF-QYDPLLLNELGVVAFNKSDMQTAINHFQNALL------LVKKTQSNEKP 514 (597)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------HHHHSCCCSGG
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHH------hhhccccchhh
Confidence 688889999999999999999999888653 23678899999999999999999988876310 0011133455
Q ss_pred -hhhhhHhhhc--cCCChhhHHhhhchhhcCCCCCchhhhhhhh
Q 021583 239 -AKPKYELDSA--TEGKTNEVETTKNPNESSEEPEAAANLNESL 279 (310)
Q Consensus 239 -~~~~~~li~~--~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll 279 (310)
..+|..+... ..|++++|.+.++.+...+ +.+...+..+.
T Consensus 515 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-p~~~~~~~~l~ 557 (597)
T 2xpi_A 515 WAATWANLGHAYRKLKMYDAAIDALNQGLLLS-TNDANVHTAIA 557 (597)
T ss_dssp GHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-SCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCChHHHHHHH
Confidence 6788888888 9999999999999887654 33555555555
No 6
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.66 E-value=1e-14 Score=138.27 Aligned_cols=196 Identities=10% Similarity=0.031 Sum_probs=132.6
Q ss_pred cHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHH
Q 021583 68 VKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147 (310)
Q Consensus 68 ~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~ 147 (310)
..++|..+++++.+.+ +.+..+++.++.+|.+.|++++|.++|+.+.+. ...+..+|+.+..+|.+.|++++|.++|+
T Consensus 320 ~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~-~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 397 (597)
T 2xpi_A 320 RFIDVLAITTKILEID-PYNLDVYPLHLASLHESGEKNKLYLISNDLVDR-HPEKAVTWLAVGIYYLCVNKISEARRYFS 397 (597)
T ss_dssp CHHHHHHHHHHHHHHC-TTCCTTHHHHHHHHHHHTCHHHHHHHHHHHHHH-CTTSHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcC-cccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhh-CcccHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 3445555566555444 224555666666666666666666666666533 23457777777788888888888888888
Q ss_pred HHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccch
Q 021583 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEY 227 (310)
Q Consensus 148 ~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~ 227 (310)
++.+..- .+..+|+.++.+|++.|++++|.++|++|.+.+ +.+..+|+.++.+|.+.|++++|.++|+++.
T Consensus 398 ~~~~~~~--~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~------ 468 (597)
T 2xpi_A 398 KSSTMDP--QFGPAWIGFAHSFAIEGEHDQAISAYTTAARLF-QGTHLPYLFLGMQHMQLGNILLANEYLQSSY------ 468 (597)
T ss_dssp HHHHHCT--TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT-TTCSHHHHHHHHHHHHHTCHHHHHHHHHHHH------
T ss_pred HHHHhCC--CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-ccchHHHHHHHHHHHHcCCHHHHHHHHHHHH------
Confidence 7776532 344578888888888888888888888777643 2366777788888888888888888776531
Q ss_pred heeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhcC----CCCCc--hhhhhhhh
Q 021583 228 RYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNESS----EEPEA--AANLNESL 279 (310)
Q Consensus 228 ~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~~----~~~p~--~~~~~~ll 279 (310)
.. .+.+..+|+.+... +.|++++|.+.++.+... +..|+ ..+++.+.
T Consensus 469 ----~~-~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~ 523 (597)
T 2xpi_A 469 ----AL-FQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLG 523 (597)
T ss_dssp ----HH-CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHH
T ss_pred ----Hh-CCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHH
Confidence 00 12356677777777 899999999999888765 66676 55666666
No 7
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.23 E-value=1.1e-08 Score=91.61 Aligned_cols=183 Identities=14% Similarity=0.108 Sum_probs=133.5
Q ss_pred CcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHH
Q 021583 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELW 146 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~ 146 (310)
+..++|...++++.+.. +-+..+|+.+...|.+.|++++|.+.|+.+.+.. +-+...|..+-..+...|++++|...|
T Consensus 149 g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~~~~~~A~~~~ 226 (388)
T 1w3b_A 149 GRLEEAKACYLKAIETQ-PNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLD-PNFLDAYINLGNVLKEARIFDRAVAAY 226 (388)
T ss_dssp SCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCTTHHHHHH
T ss_pred cCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 55666777787777654 3357788888888888899999998888887653 334677777888888888888888888
Q ss_pred HHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHhCCCCcc
Q 021583 147 TKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP-NVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKW 225 (310)
Q Consensus 147 ~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~ 225 (310)
++..+.. |.+..+|+.+...|.+.|++++|.+.|+.+.+.. | +..+|..+..+|.+.|++++|...|++...
T Consensus 227 ~~al~~~--p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~--- 299 (388)
T 1w3b_A 227 LRALSLS--PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ--PHFPDAYCNLANALKEKGSVAEAEDCYNTALR--- 299 (388)
T ss_dssp HHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC--SSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHH---
T ss_pred HHHHhhC--cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh---
Confidence 8777654 2445678888888888888888888888887743 4 467788888888888888888888765210
Q ss_pred chheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhcC
Q 021583 226 EYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNESS 266 (310)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~~ 266 (310)
. .+.+...+..+... ..|++++|.+.++.+...
T Consensus 300 -------~-~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 334 (388)
T 1w3b_A 300 -------L-CPTHADSLNNLANIKREQGNIEEAVRLYRKALEV 334 (388)
T ss_dssp -------H-CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTS
T ss_pred -------h-CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 0 02234455555555 788888888888777653
No 8
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.22 E-value=2.6e-09 Score=95.62 Aligned_cols=184 Identities=12% Similarity=0.023 Sum_probs=152.4
Q ss_pred CcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHH
Q 021583 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELW 146 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~ 146 (310)
+..+.+...++++.+.+ +-+...|..+-..+...|++++|...|+...+.. +-+..++..+...|.+.|++++|.+.|
T Consensus 183 g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~ 260 (388)
T 1w3b_A 183 GEIWLAIHHFEKAVTLD-PNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS-PNHAVVHGNLACVYYEQGLIDLAIDTY 260 (388)
T ss_dssp TCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-cCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 45566788888887765 4457889999999999999999999999987652 335789999999999999999999999
Q ss_pred HHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccc
Q 021583 147 TKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWE 226 (310)
Q Consensus 147 ~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~ 226 (310)
+++.+..- .+..+|..+...|.+.|++++|.+.++.+.+.. +.+..+|..+...+.+.|++++|...+++....
T Consensus 261 ~~al~~~p--~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--- 334 (388)
T 1w3b_A 261 RRAIELQP--HFPDAYCNLANALKEKGSVAEAEDCYNTALRLC-PTHADSLNNLANIKREQGNIEEAVRLYRKALEV--- 334 (388)
T ss_dssp HHHHHTCS--SCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTS---
T ss_pred HHHHhhCC--CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc---
Confidence 99998753 445689999999999999999999999998753 457899999999999999999999998874211
Q ss_pred hheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhcC
Q 021583 227 YRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNESS 266 (310)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~~ 266 (310)
.+.+...+..+... ..|++++|.+.++.+...
T Consensus 335 --------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 368 (388)
T 1w3b_A 335 --------FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRI 368 (388)
T ss_dssp --------CTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTT
T ss_pred --------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 12245566667666 899999999999988753
No 9
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.21 E-value=3.1e-09 Score=88.99 Aligned_cols=184 Identities=12% Similarity=-0.027 Sum_probs=143.8
Q ss_pred HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 021583 69 KEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148 (310)
Q Consensus 69 ~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~ 148 (310)
.+.|...+++..+.. +.+...+..+...|.+.|++++|.+.|+...+.. ..+...+..+...|...|++++|.++|++
T Consensus 53 ~~~A~~~~~~al~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 130 (252)
T 2ho1_A 53 TEQAKVPLRKALEID-PSSADAHAALAVVFQTEMEPKLADEEYRKALASD-SRNARVLNNYGGFLYEQKRYEEAYQRLLE 130 (252)
T ss_dssp TGGGHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcC-CChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-cCcHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 333466777766654 4467889999999999999999999999988663 34678899999999999999999999999
Q ss_pred HHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccchh
Q 021583 149 IFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYR 228 (310)
Q Consensus 149 m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~~ 228 (310)
+.+.+..+.+...|..+...|...|++++|.+.++...+.. +.+...+..+...|...|++++|..++++....
T Consensus 131 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~----- 204 (252)
T 2ho1_A 131 ASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLN-RNQPSVALEMADLLYKEREYVPARQYYDLFAQG----- 204 (252)
T ss_dssp HTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-----
T ss_pred HHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----
Confidence 98833333445689999999999999999999999988754 235788999999999999999999998763210
Q ss_pred eeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhcC
Q 021583 229 YIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNESS 266 (310)
Q Consensus 229 ~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~~ 266 (310)
...+...+..+... ..|+.++|.+.++.+...
T Consensus 205 ------~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~ 238 (252)
T 2ho1_A 205 ------GGQNARSLLLGIRLAKVFEDRDTAASYGLQLKRL 238 (252)
T ss_dssp ------SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ------CcCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 01233344444444 889999999999887653
No 10
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.19 E-value=1.7e-09 Score=98.41 Aligned_cols=199 Identities=12% Similarity=0.042 Sum_probs=156.0
Q ss_pred hHHHHHHHhcCcCchHhHHHHHHhcCCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCC
Q 021583 41 RVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQG 120 (310)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~ 120 (310)
++..+......+.+.+++.++ ...++++.+.. +.+..+|..+..+|.+.|++++|.+.|+.+.+.+ +
T Consensus 25 ~~~~~~~~~~~~~~~g~~~~A-----------~~~~~~~l~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p 91 (450)
T 2y4t_A 25 DVEKHLELGKKLLAAGQLADA-----------LSQFHAAVDGD-PDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLK-M 91 (450)
T ss_dssp HHHHHHHHHHHHHHTTCHHHH-----------HHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-T
T ss_pred HHHHHHHHHHHHHHCCCHHHH-----------HHHHHHHHHhC-CccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC-C
Confidence 344444454555556666666 77777777654 4578899999999999999999999999998764 3
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChH---HHHHHHHHH------------HHHcCCHHHHHHHHHHH
Q 021583 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR---IFFDKMISI------------YYNRGMHEKMFEIFADM 185 (310)
Q Consensus 121 p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~---~~y~~li~~------------~~~~g~~~~a~~l~~~m 185 (310)
.+..++..+...|.+.|++++|.+.|+++.+..- .+. ..|..+... |.+.|++++|.++++.+
T Consensus 92 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~ 169 (450)
T 2y4t_A 92 DFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNP--SENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKI 169 (450)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC--CChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4688999999999999999999999999998653 444 566666444 89999999999999999
Q ss_pred HHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchh
Q 021583 186 EELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPN 263 (310)
Q Consensus 186 ~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m 263 (310)
.+.. +.+...+..+..+|.+.|++++|..+|++.... .+.+...+..+... ..|++++|.+.++.+
T Consensus 170 ~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~ 237 (450)
T 2y4t_A 170 LEVC-VWDAELRELRAECFIKEGEPRKAISDLKAASKL-----------KNDNTEAFYKISTLYYQLGDHELSLSEVREC 237 (450)
T ss_dssp HHHC-TTCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHH-----------HCSCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHhC-CCChHHHHHHHHHHHHCCCHHHHHHHHHHHHHh-----------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 8753 236789999999999999999999998763200 02345666666666 899999999999988
Q ss_pred hcC
Q 021583 264 ESS 266 (310)
Q Consensus 264 ~~~ 266 (310)
...
T Consensus 238 ~~~ 240 (450)
T 2y4t_A 238 LKL 240 (450)
T ss_dssp HHH
T ss_pred HHh
Confidence 743
No 11
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.18 E-value=3.4e-09 Score=91.86 Aligned_cols=176 Identities=12% Similarity=0.124 Sum_probs=134.2
Q ss_pred CcHHHHHHHHHHHHHcCCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHH
Q 021583 67 NVKEEVYGALDSFIAWELEF-PLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEEL 145 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p-~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~ 145 (310)
+..+.+...++++...+..| +...+..+-..|.+.|++++|.+.++. ..+...+..+...|.+.|++++|.+.
T Consensus 79 ~~~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~------~~~~~~~~~l~~~~~~~g~~~~A~~~ 152 (291)
T 3mkr_A 79 SRRDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ------GDSLECMAMTVQILLKLDRLDLARKE 152 (291)
T ss_dssp TTHHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT------CCSHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CcHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC------CCCHHHHHHHHHHHHHCCCHHHHHHH
Confidence 34455688888988877656 456677777899999999999999987 46788999999999999999999999
Q ss_pred HHHHHhcCCCCChHH--HHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhC---
Q 021583 146 WTKIFLDHLEGTPRI--FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKY--- 220 (310)
Q Consensus 146 ~~~m~~~~~~~~~~~--~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~--- 220 (310)
|+++.+..- .+.. ....++..+...|++++|..+|+++.+. .+.+...|+.+..+|.+.|++++|+..|++.
T Consensus 153 l~~~~~~~p--~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~-~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~ 229 (291)
T 3mkr_A 153 LKKMQDQDE--DATLTQLATAWVSLAAGGEKLQDAYYIFQEMADK-CSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDK 229 (291)
T ss_dssp HHHHHHHCT--TCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhhCc--CcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHh-CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 999998752 2211 1122334444568999999999999876 3457899999999999999999999998872
Q ss_pred CCCccchheeccCcccCChhhhhHhhhc--cCCChhh-HHhhhchhhc
Q 021583 221 PPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNE-VETTKNPNES 265 (310)
Q Consensus 221 ~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~-a~~~~~~m~~ 265 (310)
.|+ +..++..+... ..|+..+ +.++++....
T Consensus 230 ~p~--------------~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~ 263 (291)
T 3mkr_A 230 DSG--------------HPETLINLVVLSQHLGKPPEVTNRYLSQLKD 263 (291)
T ss_dssp CTT--------------CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CCC--------------CHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 322 34445555544 6777765 6778776654
No 12
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.17 E-value=9.1e-09 Score=84.04 Aligned_cols=184 Identities=10% Similarity=-0.062 Sum_probs=139.2
Q ss_pred HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhc-CCHHHHHHHHH
Q 021583 69 KEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAED-GRLDEAEELWT 147 (310)
Q Consensus 69 ~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~-g~~~~A~~~~~ 147 (310)
.+.+...+++..+.. +.+...+..+...|...|++++|.+.|+...+.. ..+..++..+...|... |++++|.+.|+
T Consensus 24 ~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~~~A~~~~~ 101 (225)
T 2vq2_A 24 YRQATASIEDALKSD-PKNELAWLVRAEIYQYLKVNDKAQESFRQALSIK-PDSAEINNNYGWFLCGRLNRPAESMAYFD 101 (225)
T ss_dssp HHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-ccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 333467777766654 3457788899999999999999999999988653 34678899999999999 99999999999
Q ss_pred HHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccch
Q 021583 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEY 227 (310)
Q Consensus 148 ~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~ 227 (310)
++.+.+..+.+...|..+...|...|++++|.+.++.+.+.. +-+...+..+..+|...|++++|...+++...
T Consensus 102 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~----- 175 (225)
T 2vq2_A 102 KALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQ-PQFPPAFKELARTKMLAGQLGDADYYFKKYQS----- 175 (225)
T ss_dssp HHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-----
T ss_pred HHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCchHHHHHHHHHHHcCCHHHHHHHHHHHHH-----
Confidence 998833322334689999999999999999999999988753 22578899999999999999999999876210
Q ss_pred heeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhc
Q 021583 228 RYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNES 265 (310)
Q Consensus 228 ~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~ 265 (310)
.....+...+..+... ..|+.+.+..+++.+..
T Consensus 176 -----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 210 (225)
T 2vq2_A 176 -----RVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQA 210 (225)
T ss_dssp -----HHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -----hCCCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 0000223334333333 78889999888887754
No 13
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.14 E-value=6.7e-09 Score=94.47 Aligned_cols=194 Identities=9% Similarity=0.004 Sum_probs=150.5
Q ss_pred CcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHH
Q 021583 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELW 146 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~ 146 (310)
+..+.|...++++.+.. +.+...+..+...|.+.|++++|.++|+.+.+.. ..+..++..+...|...|++++|.+.|
T Consensus 157 ~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~ 234 (450)
T 2y4t_A 157 GDYTAAIAFLDKILEVC-VWDAELRELRAECFIKEGEPRKAISDLKAASKLK-NDNTEAFYKISTLYYQLGDHELSLSEV 234 (450)
T ss_dssp TCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHH-CSCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 44556677888877654 4578889999999999999999999999988652 456899999999999999999999999
Q ss_pred HHHHhcCCCCChHHHHHHH------------HHHHHHcCCHHHHHHHHHHHHHCCCCCC-----HHHHHHHHHHHHhcCC
Q 021583 147 TKIFLDHLEGTPRIFFDKM------------ISIYYNRGMHEKMFEIFADMEELGVRPN-----VSIVSMMGNAFQKLGM 209 (310)
Q Consensus 147 ~~m~~~~~~~~~~~~y~~l------------i~~~~~~g~~~~a~~l~~~m~~~g~~p~-----~~ty~~li~~~~~~g~ 209 (310)
+++.+..- .+...+..+ ...|.+.|++++|.++|+.+.+. .|+ ...|..+..++.+.|+
T Consensus 235 ~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~--~p~~~~~~~~~~~~l~~~~~~~g~ 310 (450)
T 2y4t_A 235 RECLKLDQ--DHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKT--EPSIAEYTVRSKERICHCFSKDEK 310 (450)
T ss_dssp HHHHHHCT--TCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--CCSSHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHhCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--CCcchHHHHHHHHHHHHHHHHCCC
Confidence 99987643 333455555 88999999999999999999874 455 4578899999999999
Q ss_pred HHHHHHHHHhCCCCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhcCCCCCchhhhhhhh
Q 021583 210 LDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNESSEEPEAAANLNESL 279 (310)
Q Consensus 210 ~~~a~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll 279 (310)
+++|...+++.... .+.+...+..+... ..|++++|.+.++..... .|+.......+
T Consensus 311 ~~~A~~~~~~a~~~-----------~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~l 369 (450)
T 2y4t_A 311 PVEAIRVCSEVLQM-----------EPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEH--NENDQQIREGL 369 (450)
T ss_dssp HHHHHHHHHHHHHH-----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--SSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----------CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--CcchHHHHHHH
Confidence 99999998763100 02234566666666 899999999999888763 35544433333
No 14
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.11 E-value=7.9e-09 Score=85.34 Aligned_cols=175 Identities=15% Similarity=0.089 Sum_probs=131.9
Q ss_pred HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhc-----------C
Q 021583 69 KEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAED-----------G 137 (310)
Q Consensus 69 ~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~-----------g 137 (310)
.++|...+++..+.. +-+...+..+-..+.+.|++++|...|+...+.. +-+...+..+-..|.+. |
T Consensus 21 ~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~-P~~~~a~~~lg~~~~~~~~~~~~~~~~~g 98 (217)
T 2pl2_A 21 YDAALTLFERALKEN-PQDPEALYWLARTQLKLGLVNPALENGKTLVART-PRYLGGYMVLSEAYVALYRQAEDRERGKG 98 (217)
T ss_dssp HHHHHHHHHHHHTTS-SSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHHTCSSHHHHHH
T ss_pred HHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHhhhhhhhhccccc
Confidence 344477777777655 4568889999999999999999999999988663 34578889999999999 9
Q ss_pred CHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHH
Q 021583 138 RLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLK 217 (310)
Q Consensus 138 ~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~ 217 (310)
++++|.+.|++..+.. |.+...|..+-..|...|++++|++.|++..+.. .+...+..+..+|...|++++|...|
T Consensus 99 ~~~~A~~~~~~al~~~--P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~la~~~~~~g~~~~A~~~~ 174 (217)
T 2pl2_A 99 YLEQALSVLKDAERVN--PRYAPLHLQRGLVYALLGERDKAEASLKQALALE--DTPEIRSALAELYLSMGRLDEALAQY 174 (217)
T ss_dssp HHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhC--cccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc--cchHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999999874 3455689999999999999999999999999877 78899999999999999999999998
Q ss_pred HhC---CCCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchh
Q 021583 218 KKY---PPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPN 263 (310)
Q Consensus 218 ~~~---~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m 263 (310)
++. .|+ +...+..+... ..|+.++|.+.++..
T Consensus 175 ~~al~~~P~--------------~~~~~~~la~~~~~~g~~~~A~~~~~~~ 211 (217)
T 2pl2_A 175 AKALEQAPK--------------DLDLRVRYASALLLKGKAEEAARAAALE 211 (217)
T ss_dssp HHHHHHSTT--------------CHHHHHHHHHHHTC--------------
T ss_pred HHHHHhCCC--------------ChHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 762 222 33444444444 889999998877654
No 15
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.07 E-value=1.1e-08 Score=84.79 Aligned_cols=196 Identities=12% Similarity=0.065 Sum_probs=142.2
Q ss_pred HHHHHhcCcCchHhHHHHHHhcCCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCH
Q 021583 44 KARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTM 123 (310)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~ 123 (310)
.+......+...+++..+ ...+++..+.. +.+...+..+...|.+.|++++|.+.|+...+.. ..+.
T Consensus 25 ~~~~~a~~~~~~~~~~~A-----------~~~~~~~l~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~~~ 91 (243)
T 2q7f_A 25 TGGQQMGRGSEFGDYEKA-----------AEAFTKAIEEN-KEDAIPYINFANLLSSVNELERALAFYDKALELD-SSAA 91 (243)
T ss_dssp -----------------C-----------CTTHHHHHTTC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCH
T ss_pred HHHHHHHHHHHhhCHHHH-----------HHHHHHHHHhC-cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-Ccch
Confidence 444444455666666666 55555665543 4468889999999999999999999999988663 3478
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q 021583 124 GTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNA 203 (310)
Q Consensus 124 ~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~ 203 (310)
.++..+...|...|++++|.++|++..+..- .+...|..+...|.+.|++++|.+.++...+.. +.+...+..+...
T Consensus 92 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~--~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~ 168 (243)
T 2q7f_A 92 TAYYGAGNVYVVKEMYKEAKDMFEKALRAGM--ENGDLFYMLGTVLVKLEQPKLALPYLQRAVELN-ENDTEARFQFGMC 168 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTC--CSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CccHHHHHHHHHH
Confidence 8899999999999999999999999988754 445689999999999999999999999988653 2367889999999
Q ss_pred HHhcCCHHHHHHHHHhCCCCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhcC
Q 021583 204 FQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNESS 266 (310)
Q Consensus 204 ~~~~g~~~~a~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~~ 266 (310)
|...|++++|...|++.... ...+...+..+... ..|+.++|.+.++.....
T Consensus 169 ~~~~~~~~~A~~~~~~~~~~-----------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 222 (243)
T 2q7f_A 169 LANEGMLDEALSQFAAVTEQ-----------DPGHADAFYNAGVTYAYKENREKALEMLDKAIDI 222 (243)
T ss_dssp HHHHTCCHHHHHHHHHHHHH-----------CTTCHHHHHHHHHHHHHTTCTTHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHh-----------CcccHHHHHHHHHHHHHccCHHHHHHHHHHHHcc
Confidence 99999999999998763100 01233455555555 889999999999877653
No 16
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.04 E-value=4.1e-09 Score=90.58 Aligned_cols=188 Identities=12% Similarity=0.096 Sum_probs=136.6
Q ss_pred hhhhccCCCCCCchHHHHHHHhcCcCchHhHHHHHHhcCCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHH
Q 021583 28 VVCAARGPRPRYPRVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRI 107 (310)
Q Consensus 28 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a 107 (310)
....+.+..+.......+..+...+...+++.+++..+. ++..+.........+....++..+...|...|++++|
T Consensus 13 ~~~~q~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~----~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 88 (311)
T 3nf1_A 13 NLYFQGGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCK----QALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDA 88 (311)
T ss_dssp GGSCSSSCTTSCHHHHHHHHHHHHHHHTTCHHHHHHHHH----HHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred cccccCCCCcchHHHHHHHHHHHHHHHcCCHHHHHHHHH----HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHH
Confidence 445555555555566666666666777888888844433 1111111111112233456788999999999999999
Q ss_pred HHHHHHHHHC------CC-CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC-----CCCCh-HHHHHHHHHHHHHcCC
Q 021583 108 IQVTKWMLSK------GQ-GRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDH-----LEGTP-RIFFDKMISIYYNRGM 174 (310)
Q Consensus 108 ~~~~~~m~~~------g~-~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~-----~~~~~-~~~y~~li~~~~~~g~ 174 (310)
.+.|+..... +- .....++..+...|...|++++|.+.|++..+.. ...+. ...|..+...|...|+
T Consensus 89 ~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 168 (311)
T 3nf1_A 89 ANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGK 168 (311)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCC
Confidence 9999997754 22 2346788899999999999999999999988762 21122 2479999999999999
Q ss_pred HHHHHHHHHHHHHC------CCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 175 HEKMFEIFADMEEL------GVRPN-VSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 175 ~~~a~~l~~~m~~~------g~~p~-~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
+++|.+++++..+. +-.|+ ..++..+..+|...|++++|...+++
T Consensus 169 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 220 (311)
T 3nf1_A 169 YEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKE 220 (311)
T ss_dssp HHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 99999999998764 22343 46889999999999999999999876
No 17
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.02 E-value=2.2e-08 Score=83.52 Aligned_cols=185 Identities=10% Similarity=0.026 Sum_probs=138.2
Q ss_pred CcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCC--CCCC----HHHHHHHHHHHHhcCCHH
Q 021583 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKG--QGRT----MGTYFLLLNALAEDGRLD 140 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g--~~p~----~~ty~~ll~~~~~~g~~~ 140 (310)
+..+.|...+++..+.. .+...+..+...|...|++++|.+.|+...+.. ..++ ..+|..+...|...|+++
T Consensus 19 ~~~~~A~~~~~~a~~~~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 96 (258)
T 3uq3_A 19 RQFDEAIEHYNKAWELH--KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLK 96 (258)
T ss_dssp TCHHHHHHHHHHHHHHS--CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred ccHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHH
Confidence 33444577888877777 778889999999999999999999999877542 2223 588889999999999999
Q ss_pred HHHHHHHHHHhcC------------------------CCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHH
Q 021583 141 EAEELWTKIFLDH------------------------LEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSI 196 (310)
Q Consensus 141 ~A~~~~~~m~~~~------------------------~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~t 196 (310)
+|.+.|++..+.. ..+.+...|..+...|...|++++|.+.++...+.. +.+..+
T Consensus 97 ~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~ 175 (258)
T 3uq3_A 97 KTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRA-PEDARG 175 (258)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHH
T ss_pred HHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-cccHHH
Confidence 9999999988743 212233478888888999999999999999887653 235788
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHhCCCCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhc
Q 021583 197 VSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNES 265 (310)
Q Consensus 197 y~~li~~~~~~g~~~~a~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~ 265 (310)
|..+..+|...|++++|...|++.... .+.+...+..+... ..|++++|.+.++....
T Consensus 176 ~~~l~~~~~~~~~~~~A~~~~~~al~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 235 (258)
T 3uq3_A 176 YSNRAAALAKLMSFPEAIADCNKAIEK-----------DPNFVRAYIRKATAQIAVKEYASALETLDAART 235 (258)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHh-----------CHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 888999999999999999988763100 01123444444444 78889988888876543
No 18
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.02 E-value=1.3e-09 Score=98.78 Aligned_cols=210 Identities=10% Similarity=0.006 Sum_probs=96.2
Q ss_pred HHhcCcCchHhHHHHHHhcC------------------CcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHH
Q 021583 47 KRIGTISKSAKLVTCIKGLS------------------NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRII 108 (310)
Q Consensus 47 ~~~~~~~~~~~~~~~l~~~~------------------~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~ 108 (310)
.+...+.+.+.+.+|+.++. +..+.+...++..++ . .++..+.+.++.+|.+.|+++++.
T Consensus 37 ~La~A~l~~g~~~eAIdsfika~D~~~y~~V~~~ae~~g~~EeAi~yl~~ark-~-~~~~~i~~~Li~~Y~Klg~l~e~e 114 (449)
T 1b89_A 37 QLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANTSGNWEELVKYLQMARK-K-ARESYVETELIFALAKTNRLAELE 114 (449)
T ss_dssp --------------------------------------------------------------------------CHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHH-h-CccchhHHHHHHHHHHhCCHHHHH
Confidence 55555666666666665544 223334443333333 2 344677788888888888888888
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 021583 109 QVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188 (310)
Q Consensus 109 ~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~ 188 (310)
++++ .|+..+|..+.+.|...|++++|..+|..+ ..|..|..++++.|++++|.+.+..+
T Consensus 115 ~f~~-------~pn~~a~~~IGd~~~~~g~yeeA~~~Y~~a----------~n~~~LA~~L~~Lg~yq~AVea~~KA--- 174 (449)
T 1b89_A 115 EFIN-------GPNNAHIQQVGDRCYDEKMYDAAKLLYNNV----------SNFGRLASTLVHLGEYQAAVDGARKA--- 174 (449)
T ss_dssp TTTT-------CC----------------CTTTHHHHHHHT----------TCHHHHHHHHHTTTCHHHHHHHHHHH---
T ss_pred HHHc-------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHh----------hhHHHHHHHHHHhccHHHHHHHHHHc---
Confidence 7774 377778888888888888888888888865 25889999999999999999998887
Q ss_pred CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhcC
Q 021583 189 GVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNESS 266 (310)
Q Consensus 189 g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~~ 266 (310)
-++.+|..++.+|...|+++.|...... +.....-...++.. +.|.+++|..+++.-+..
T Consensus 175 ---~~~~~Wk~v~~aCv~~~ef~lA~~~~l~---------------L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~l 236 (449)
T 1b89_A 175 ---NSTRTWKEVCFACVDGKEFRLAQMCGLH---------------IVVHADELEELINYYQDRGYFEELITMLEAALGL 236 (449)
T ss_dssp ---TCHHHHHHHHHHHHHTTCHHHHHHTTTT---------------TTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred ---CCchhHHHHHHHHHHcCcHHHHHHHHHH---------------HHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCC
Confidence 3788899999999999999998655322 11222223345555 899999999998877655
Q ss_pred CCCCchhhhhhhh-hhhhhhhHHHHHHhhhcc
Q 021583 267 EEPEAAANLNESL-EETEANTKELLEEADAIS 297 (310)
Q Consensus 267 ~~~p~~~~~~~ll-~~~~~~~~~l~~~a~~~~ 297 (310)
+ +-....|..+- -...=....+.+......
T Consensus 237 e-~ah~~~ftel~il~~ky~p~k~~ehl~~~~ 267 (449)
T 1b89_A 237 E-RAHMGMFTELAILYSKFKPQKMREHLELFW 267 (449)
T ss_dssp T-TCCHHHHHHHHHHHHTTCHHHHHHHHHHHS
T ss_pred c-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 5 33444454443 122224444555555444
No 19
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.01 E-value=1.7e-08 Score=89.40 Aligned_cols=185 Identities=8% Similarity=-0.032 Sum_probs=133.6
Q ss_pred CcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHH
Q 021583 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELW 146 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~ 146 (310)
+..+.|...+++..+.. +.+..+|..+...|.+.|++++|.+.|+...+.. +.+..+|..+...|...|++++|.+.|
T Consensus 79 g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~ 156 (365)
T 4eqf_A 79 GDLPVTILFMEAAILQD-PGDAEAWQFLGITQAENENEQAAIVALQRCLELQ-PNNLKALMALAVSYTNTSHQQDACEAL 156 (365)
T ss_dssp TCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhC-cCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHccccHHHHHHHH
Confidence 33444577888877765 4568899999999999999999999999988763 446889999999999999999999999
Q ss_pred HHHHhcCCCCChH----------HHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHhcCCHHHHHH
Q 021583 147 TKIFLDHLEGTPR----------IFFDKMISIYYNRGMHEKMFEIFADMEELGVR-PNVSIVSMMGNAFQKLGMLDKYEK 215 (310)
Q Consensus 147 ~~m~~~~~~~~~~----------~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~-p~~~ty~~li~~~~~~g~~~~a~~ 215 (310)
+++.+..- .+. ..+..+...|...|++++|.++++++.+..-. ++..+|..+...|...|++++|..
T Consensus 157 ~~al~~~p--~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~ 234 (365)
T 4eqf_A 157 KNWIKQNP--KYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAID 234 (365)
T ss_dssp HHHHHHCH--HHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHhCc--cchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHH
Confidence 99987532 111 12344577888899999999999998875321 257888899999999999999999
Q ss_pred HHHhCCCCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhcC
Q 021583 216 LKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNESS 266 (310)
Q Consensus 216 l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~~ 266 (310)
.|++.... .+.+...+..+... ..|++++|.+.++.....
T Consensus 235 ~~~~al~~-----------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 276 (365)
T 4eqf_A 235 AFNAALTV-----------RPEDYSLWNRLGATLANGDRSEEAVEAYTRALEI 276 (365)
T ss_dssp HHHHHHHH-----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHh-----------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 88762100 01234556666666 888999999888877553
No 20
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.99 E-value=1.9e-07 Score=77.85 Aligned_cols=150 Identities=9% Similarity=-0.084 Sum_probs=127.7
Q ss_pred CCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhcCCHHHHHH
Q 021583 66 SNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGR-TMGTYFLLLNALAEDGRLDEAEE 144 (310)
Q Consensus 66 ~~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p-~~~ty~~ll~~~~~~g~~~~A~~ 144 (310)
.+..++|...+++..+.. +.+...+..+...|.+.|++++|.++|+.....+..| +...+..+...|.+.|++++|.+
T Consensus 84 ~~~~~~A~~~~~~a~~~~-~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 162 (252)
T 2ho1_A 84 EMEPKLADEEYRKALASD-SRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKE 162 (252)
T ss_dssp TTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHC-cCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHH
Confidence 366777888888887765 3467889999999999999999999999988744455 46788889999999999999999
Q ss_pred HHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 145 LWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 145 ~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
.|++..+..- .+...|..+...|...|++++|.+.++...+.. +.+...+..+...|...|+.++|.+++++
T Consensus 163 ~~~~~~~~~~--~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ 234 (252)
T 2ho1_A 163 YFEKSLRLNR--NQPSVALEMADLLYKEREYVPARQYYDLFAQGG-GQNARSLLLGIRLAKVFEDRDTAASYGLQ 234 (252)
T ss_dssp HHHHHHHHCS--CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTS-CCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHhcCc--ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-cCcHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 9999988753 445689999999999999999999999987643 34678889999999999999999999876
No 21
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=98.99 E-value=5.9e-08 Score=76.40 Aligned_cols=143 Identities=11% Similarity=0.003 Sum_probs=120.4
Q ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 021583 72 VYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFL 151 (310)
Q Consensus 72 ~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~ 151 (310)
+...+++..+.. +.+...+..+...+...|++++|.+.++...+.. ..+...+..+...|...|++++|.+.|++..+
T Consensus 27 A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 104 (186)
T 3as5_A 27 AVMLLEQVYDAD-AFDVDVALHLGIAYVKTGAVDRGTELLERSLADA-PDNVKVATVLGLTYVQVQKYDLAVPLLIKVAE 104 (186)
T ss_dssp HHHHHTTTCCTT-SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-ccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 355555554433 3467889999999999999999999999988663 45678899999999999999999999999988
Q ss_pred cCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 152 DHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 152 ~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
..- .+...|..+...|...|++++|.+.++...+.. +.+...+..+...|...|++++|.+.+++
T Consensus 105 ~~~--~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 169 (186)
T 3as5_A 105 ANP--INFNVRFRLGVALDNLGRFDEAIDSFKIALGLR-PNEGKVHRAIAFSYEQMGRHEEALPHFKK 169 (186)
T ss_dssp HCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cCc--HhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcC-ccchHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 753 445689999999999999999999999988754 33578999999999999999999999876
No 22
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.99 E-value=5.9e-08 Score=72.04 Aligned_cols=126 Identities=21% Similarity=0.232 Sum_probs=108.6
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHH
Q 021583 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIY 169 (310)
Q Consensus 90 ~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~ 169 (310)
.|..+...+...|++++|..+|+.+.+.. ..+...+..+...+...|++++|.++|+++.+.+- .+...|..+...|
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~--~~~~~~~~l~~~~ 79 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELD-PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP--RSAEAWYNLGNAY 79 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcC-CcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCC--CchHHHHHHHHHH
Confidence 56778889999999999999999988663 34678888899999999999999999999988753 4456788999999
Q ss_pred HHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 170 YNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 170 ~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
...|++++|.++++++.+.. +.+...+..+...|...|++++|.+.+++
T Consensus 80 ~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 128 (136)
T 2fo7_A 80 YKQGDYDEAIEYYQKALELD-PRSAEAWYNLGNAYYKQGDYDEAIEYYQK 128 (136)
T ss_dssp HTTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 99999999999999988753 23578888999999999999999999876
No 23
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.98 E-value=1.6e-08 Score=89.57 Aligned_cols=183 Identities=10% Similarity=0.081 Sum_probs=137.7
Q ss_pred CcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCC---------CCHHHHHHHHHHHHhcC
Q 021583 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQG---------RTMGTYFLLLNALAEDG 137 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~---------p~~~ty~~ll~~~~~~g 137 (310)
+..+.|...+++..+.. +.+..++..+...|.+.|++++|.+.|+.+.+..-. .....+..+...|.+.|
T Consensus 113 g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g 191 (365)
T 4eqf_A 113 ENEQAAIVALQRCLELQ-PNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSS 191 (365)
T ss_dssp TCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCH
T ss_pred CCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhh
Confidence 55667788888887765 446889999999999999999999999998764210 11334456688999999
Q ss_pred CHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHH
Q 021583 138 RLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLK 217 (310)
Q Consensus 138 ~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~ 217 (310)
++++|.++|+++.+..-...+..+|..+...|...|++++|.+.+++..+.. +.+..+|..+..+|...|++++|...|
T Consensus 192 ~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~ 270 (365)
T 4eqf_A 192 VLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVR-PEDYSLWNRLGATLANGDRSEEAVEAY 270 (365)
T ss_dssp HHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999999885421255689999999999999999999999988753 235789999999999999999999998
Q ss_pred HhC---CCCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhc
Q 021583 218 KKY---PPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNES 265 (310)
Q Consensus 218 ~~~---~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~ 265 (310)
++. .|+ +...+..+... ..|++++|.+.++....
T Consensus 271 ~~al~~~p~--------------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 309 (365)
T 4eqf_A 271 TRALEIQPG--------------FIRSRYNLGISCINLGAYREAVSNFLTALS 309 (365)
T ss_dssp HHHHHHCTT--------------CHHHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHhcCCC--------------chHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 762 222 24555556555 88999999999977654
No 24
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.97 E-value=8.1e-08 Score=84.76 Aligned_cols=188 Identities=12% Similarity=0.039 Sum_probs=128.4
Q ss_pred CcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCC---------------------------
Q 021583 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQ--------------------------- 119 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~--------------------------- 119 (310)
+..+.|...+++..+.+ +.+..++..+...|...|++++|.+.|+.+....-
T Consensus 112 g~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (368)
T 1fch_A 112 EQELLAISALRRCLELK-PDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGS 190 (368)
T ss_dssp TCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHH
T ss_pred cCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHH
Confidence 44556677777766654 44677788888888888888888888777654321
Q ss_pred --------------------CC---CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHH
Q 021583 120 --------------------GR---TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHE 176 (310)
Q Consensus 120 --------------------~p---~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~ 176 (310)
.| +..++..+...|.+.|++++|.+.|++..+..- .+..+|..+...|.+.|+++
T Consensus 191 ~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~--~~~~~~~~l~~~~~~~g~~~ 268 (368)
T 1fch_A 191 LLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRP--NDYLLWNKLGATLANGNQSE 268 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHTTCHH
T ss_pred HhhcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc--CCHHHHHHHHHHHHHcCCHH
Confidence 12 467778888888888888888888888877642 34457888888888888888
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhC---CCCccchheeccCcccCChhhhhHhhhc--cCC
Q 021583 177 KMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKY---PPPKWEYRYIKGKRVRIPAKPKYELDSA--TEG 251 (310)
Q Consensus 177 ~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~---~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g 251 (310)
+|.+.++...+.. +.+...|..+..+|.+.|++++|...|++. .|+.... ...........|..+..+ ..|
T Consensus 269 ~A~~~~~~al~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~g 344 (368)
T 1fch_A 269 EAVAAYRRALELQ-PGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGP---RGEGGAMSENIWSTLRLALSMLG 344 (368)
T ss_dssp HHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC---------CCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhC-CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCc---cccccchhhHHHHHHHHHHHHhC
Confidence 8888888877642 234677888888888888888888887652 1111000 000012235566666666 788
Q ss_pred ChhhHHhhhc
Q 021583 252 KTNEVETTKN 261 (310)
Q Consensus 252 ~~~~a~~~~~ 261 (310)
+.++|.....
T Consensus 345 ~~~~A~~~~~ 354 (368)
T 1fch_A 345 QSDAYGAADA 354 (368)
T ss_dssp CGGGHHHHHT
T ss_pred ChHhHHHhHH
Confidence 8888887765
No 25
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.97 E-value=1.8e-07 Score=74.43 Aligned_cols=160 Identities=15% Similarity=0.060 Sum_probs=131.2
Q ss_pred HHHHHhcCcCchHhHHHHHHhcCCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCH
Q 021583 44 KARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTM 123 (310)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~ 123 (310)
.+..+...+...|++.+| ...+++..+.+ +-+..++..+...|.+.|++++|.+.+....... .-+.
T Consensus 7 iy~~lG~~~~~~g~~~~A-----------~~~~~~al~~~-p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~-~~~~ 73 (184)
T 3vtx_A 7 IYMDIGDKKRTKGDFDGA-----------IRAYKKVLKAD-PNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLD-TTSA 73 (184)
T ss_dssp HHHHHHHHHHHHTCHHHH-----------HHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCCH
T ss_pred HHHHHHHHHHHcCCHHHH-----------HHHHHHHHHhC-CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC-chhH
Confidence 444555556666777777 66666766654 3467889999999999999999999999987663 3457
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q 021583 124 GTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNA 203 (310)
Q Consensus 124 ~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~ 203 (310)
..+..+...+...+++++|.+.+.+..+..- .+...+..+-..|.+.|++++|++.|+...+.. +-+...|..+..+
T Consensus 74 ~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~--~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~~lg~~ 150 (184)
T 3vtx_A 74 EAYYILGSANFMIDEKQAAIDALQRAIALNT--VYADAYYKLGLVYDSMGEHDKAIEAYEKTISIK-PGFIRAYQSIGLA 150 (184)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc--cchHHHHHHHHHHHHhCCchhHHHHHHHHHHhc-chhhhHHHHHHHH
Confidence 7888888899999999999999999888753 455689999999999999999999999988753 2257889999999
Q ss_pred HHhcCCHHHHHHHHHh
Q 021583 204 FQKLGMLDKYEKLKKK 219 (310)
Q Consensus 204 ~~~~g~~~~a~~l~~~ 219 (310)
|.+.|++++|.+.|++
T Consensus 151 ~~~~g~~~~A~~~~~~ 166 (184)
T 3vtx_A 151 YEGKGLRDEAVKYFKK 166 (184)
T ss_dssp HHHTTCHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHH
Confidence 9999999999999986
No 26
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.97 E-value=1.4e-08 Score=87.98 Aligned_cols=188 Identities=10% Similarity=0.021 Sum_probs=137.6
Q ss_pred CcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHhcCCHHHHHHH
Q 021583 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRT-MGTYFLLLNALAEDGRLDEAEEL 145 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~-~~ty~~ll~~~~~~g~~~~A~~~ 145 (310)
+..+.|...++. .-+|+..++..+...+...++.++|.+.++.+...+..|+ ...+..+-..|...|++++|++.
T Consensus 48 g~~~~al~~~~~----~~~~~~~a~~~la~~~~~~~~~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~ 123 (291)
T 3mkr_A 48 RKYGVVLDEIKP----SSAPELQAVRMFAEYLASHSRRDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRT 123 (291)
T ss_dssp TCHHHHHHHSCT----TSCHHHHHHHHHHHHHHCSTTHHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHhcc----cCChhHHHHHHHHHHHcCCCcHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCCCHHHHHHH
Confidence 444554443322 2356778899999999999999999999999998876664 55666667899999999999999
Q ss_pred HHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHH---HHHHHHHHhcCCHHHHHHHHHhCCC
Q 021583 146 WTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIV---SMMGNAFQKLGMLDKYEKLKKKYPP 222 (310)
Q Consensus 146 ~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty---~~li~~~~~~g~~~~a~~l~~~~~p 222 (310)
+++ +.+...+..+...|.+.|++++|.+.++.+.+.. |+...+ ..++..+...|++++|..+|+++.
T Consensus 124 l~~-------~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~--p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l- 193 (291)
T 3mkr_A 124 LHQ-------GDSLECMAMTVQILLKLDRLDLARKELKKMQDQD--EDATLTQLATAWVSLAAGGEKLQDAYYIFQEMA- 193 (291)
T ss_dssp HTT-------CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHH-
T ss_pred HhC-------CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhC--cCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHH-
Confidence 987 2444689999999999999999999999998764 664321 223344455699999999987631
Q ss_pred CccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhcCCCCCchhhhhhhh
Q 021583 223 PKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNESSEEPEAAANLNESL 279 (310)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll 279 (310)
.. .+.+...++.+..+ ..|++++|++.+++..... |-+..++..+.
T Consensus 194 ---------~~-~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~-p~~~~~l~~l~ 241 (291)
T 3mkr_A 194 ---------DK-CSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKD-SGHPETLINLV 241 (291)
T ss_dssp ---------HH-SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHH
T ss_pred ---------Hh-CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHH
Confidence 11 13466777777666 9999999999998876543 22333444443
No 27
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.95 E-value=9.2e-08 Score=82.75 Aligned_cols=184 Identities=9% Similarity=-0.039 Sum_probs=112.1
Q ss_pred cHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHH
Q 021583 68 VKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147 (310)
Q Consensus 68 ~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~ 147 (310)
..+.+...+++..+.. +.+...|..+...|...|++++|.+.|+...+.. ..+...+..+...|...|++++|.+.|+
T Consensus 106 ~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 183 (330)
T 3hym_B 106 KNEHARRYLSKATTLE-KTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLM-KGCHLPMLYIGLEYGLTNNSKLAERFFS 183 (330)
T ss_dssp CHHHHHHHHHHHHTTC-TTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHT-TTCSHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhc-cccHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4555566666655543 2345566666677777777777777777666542 2234555556667777777777777777
Q ss_pred HHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCC--------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG--------VRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 148 ~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g--------~~p~~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
+..+..- .+...|..+...|...|++++|.+.++...+.. ...+..+|..+..+|...|++++|...|++
T Consensus 184 ~al~~~~--~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 261 (330)
T 3hym_B 184 QALSIAP--EDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQ 261 (330)
T ss_dssp HHHTTCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHhCC--CChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 7666532 334567777777777777777777777665421 122345667777777777777777777655
Q ss_pred CCCCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhcC
Q 021583 220 YPPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNESS 266 (310)
Q Consensus 220 ~~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~~ 266 (310)
... . .+.+...+..+... ..|++++|.+.++.....
T Consensus 262 a~~----------~-~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 299 (330)
T 3hym_B 262 ALV----------L-IPQNASTYSAIGYIHSLMGNFENAVDYFHTALGL 299 (330)
T ss_dssp HHH----------H-STTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTT
T ss_pred HHh----------h-CccchHHHHHHHHHHHHhccHHHHHHHHHHHHcc
Confidence 210 0 01133444445444 788888888888776543
No 28
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.94 E-value=2.7e-07 Score=81.32 Aligned_cols=185 Identities=8% Similarity=-0.021 Sum_probs=138.1
Q ss_pred CcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHH
Q 021583 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELW 146 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~ 146 (310)
+..+.|...+++..+.. +.+..++..+...|.+.|++++|.+.|+...+.. +.+..++..+...|...|++++|.+.|
T Consensus 78 g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~ 155 (368)
T 1fch_A 78 GDLPNAVLLFEAAVQQD-PKHMEAWQYLGTTQAENEQELLAISALRRCLELK-PDNQTALMALAVSFTNESLQRQACEIL 155 (368)
T ss_dssp TCHHHHHHHHHHHHHSC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 45556688888888765 4578899999999999999999999999988764 457889999999999999999999999
Q ss_pred HHHHhcCCC-----------------------------------------------CC--hHHHHHHHHHHHHHcCCHHH
Q 021583 147 TKIFLDHLE-----------------------------------------------GT--PRIFFDKMISIYYNRGMHEK 177 (310)
Q Consensus 147 ~~m~~~~~~-----------------------------------------------~~--~~~~y~~li~~~~~~g~~~~ 177 (310)
+++.+..-. +. +..+|..+...|.+.|++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~ 235 (368)
T 1fch_A 156 RDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDK 235 (368)
T ss_dssp HHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHH
Confidence 987765321 01 23467777788888888888
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccchheeccCcccCChhhhhHhhhc--cCCChhh
Q 021583 178 MFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNE 255 (310)
Q Consensus 178 a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~ 255 (310)
|.+.++...+.. +.+..+|..+..+|...|++++|...|++.... .+.+...+..+... ..|++++
T Consensus 236 A~~~~~~al~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-----------~~~~~~~~~~l~~~~~~~g~~~~ 303 (368)
T 1fch_A 236 AVDCFTAALSVR-PNDYLLWNKLGATLANGNQSEEAVAAYRRALEL-----------QPGYIRSRYNLGISCINLGAHRE 303 (368)
T ss_dssp HHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----------CTTCHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHhC-cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----------CCCcHHHHHHHHHHHHHCCCHHH
Confidence 888888876642 224677888888888888888888887652100 01234455555555 8899999
Q ss_pred HHhhhchhhc
Q 021583 256 VETTKNPNES 265 (310)
Q Consensus 256 a~~~~~~m~~ 265 (310)
|.+.++....
T Consensus 304 A~~~~~~al~ 313 (368)
T 1fch_A 304 AVEHFLEALN 313 (368)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999876653
No 29
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.94 E-value=3.8e-07 Score=78.85 Aligned_cols=193 Identities=8% Similarity=-0.128 Sum_probs=144.3
Q ss_pred CcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHH
Q 021583 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEK-DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEEL 145 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~-~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~ 145 (310)
+..+.+...++++.+.. +-+...+..+...+...| ++++|.+.|+...+.. +.+...|..+...|...|++++|.+.
T Consensus 70 ~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~ 147 (330)
T 3hym_B 70 NKANELFYLSHKLVDLY-PSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLE-KTYGPAWIAYGHSFAVESEHDQAMAA 147 (330)
T ss_dssp TCHHHHHHHHHHHHHHC-TTSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTTC-TTCTHHHHHHHHHHHHHTCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhC-cCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHccCHHHHHHH
Confidence 44566677777777654 345678888889999999 9999999999988653 34567888999999999999999999
Q ss_pred HHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhCCCCcc
Q 021583 146 WTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKW 225 (310)
Q Consensus 146 ~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~ 225 (310)
|++..+..- .+...+..+...|...|++++|.+.++...+.. +.+...+..+...|...|++++|...+++......
T Consensus 148 ~~~a~~~~~--~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 224 (330)
T 3hym_B 148 YFTAAQLMK--GCHLPMLYIGLEYGLTNNSKLAERFFSQALSIA-PEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIK 224 (330)
T ss_dssp HHHHHHHTT--TCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcc--ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhh
Confidence 999888753 333567779999999999999999999988653 23578899999999999999999999876210000
Q ss_pred chheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhcC
Q 021583 226 EYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNESS 266 (310)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~~ 266 (310)
... ...........+..+... ..|++++|.+.++.....
T Consensus 225 ~~~--~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 225 AIG--NEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVL 265 (330)
T ss_dssp TTS--CSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hcc--ccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 000 001112334566666655 899999999999877653
No 30
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=98.92 E-value=1.9e-07 Score=77.24 Aligned_cols=149 Identities=13% Similarity=0.032 Sum_probs=127.3
Q ss_pred CCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHH
Q 021583 66 SNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEEL 145 (310)
Q Consensus 66 ~~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~ 145 (310)
.+..+.+...+++..+.. +.+...+..+...|.+.|++++|.+.|+...+.. ..+...+..+...|.+.|++++|.+.
T Consensus 70 ~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~ 147 (243)
T 2q7f_A 70 VNELERALAFYDKALELD-SSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAG-MENGDLFYMLGTVLVKLEQPKLALPY 147 (243)
T ss_dssp TTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-CCSHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcC-CcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhccHHHHHHH
Confidence 355666688888877664 4467889999999999999999999999988763 45678899999999999999999999
Q ss_pred HHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 146 WTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 146 ~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
+++..+..- .+...|..+...|.+.|++++|.+.++...+.. +.+..+|..+..+|...|++++|.+.+++
T Consensus 148 ~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 218 (243)
T 2q7f_A 148 LQRAVELNE--NDTEARFQFGMCLANEGMLDEALSQFAAVTEQD-PGHADAFYNAGVTYAYKENREKALEMLDK 218 (243)
T ss_dssp HHHHHHHCT--TCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCTTHHHHHHHH
T ss_pred HHHHHHhCC--ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 999988753 445689999999999999999999999988753 23578899999999999999999999876
No 31
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.92 E-value=2.8e-07 Score=73.25 Aligned_cols=162 Identities=14% Similarity=0.068 Sum_probs=133.7
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHH
Q 021583 87 PLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMI 166 (310)
Q Consensus 87 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li 166 (310)
+...|..+-..|.+.|++++|.+.|++..+.. +-+..++..+...|.+.|++++|.+.+.+.....- .+...+..+-
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~ 80 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKAD-PNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDT--TSAEAYYILG 80 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC--CCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCc--hhHHHHHHHH
Confidence 46789999999999999999999999988663 34678899999999999999999999999988764 4456788888
Q ss_pred HHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhC---CCCccchheeccCcccCChhhhh
Q 021583 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKY---PPPKWEYRYIKGKRVRIPAKPKY 243 (310)
Q Consensus 167 ~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~---~p~~~~~~~~~~~~~~~~~~~~~ 243 (310)
..+...++++.+.+.+....... +-+...+..+..+|.+.|++++|.+.|++. .| .+...+.
T Consensus 81 ~~~~~~~~~~~a~~~~~~a~~~~-~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p--------------~~~~~~~ 145 (184)
T 3vtx_A 81 SANFMIDEKQAAIDALQRAIALN-TVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKP--------------GFIRAYQ 145 (184)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--------------TCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhC-ccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcc--------------hhhhHHH
Confidence 89999999999999999987643 225788999999999999999999998762 22 2344555
Q ss_pred Hhhhc--cCCChhhHHhhhchhhcC
Q 021583 244 ELDSA--TEGKTNEVETTKNPNESS 266 (310)
Q Consensus 244 ~li~~--~~g~~~~a~~~~~~m~~~ 266 (310)
.+-.. ..|++++|.+.++.....
T Consensus 146 ~lg~~~~~~g~~~~A~~~~~~al~~ 170 (184)
T 3vtx_A 146 SIGLAYEGKGLRDEAVKYFKKALEK 170 (184)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhC
Confidence 55555 899999999999876553
No 32
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.90 E-value=3.5e-07 Score=74.39 Aligned_cols=150 Identities=9% Similarity=-0.075 Sum_probs=125.0
Q ss_pred CcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHhcCCHHHHHH
Q 021583 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLENE-KDWKRIIQVTKWMLSKGQGRT-MGTYFLLLNALAEDGRLDEAEE 144 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~-~~~~~a~~~~~~m~~~g~~p~-~~ty~~ll~~~~~~g~~~~A~~ 144 (310)
+..+.+...+++..+.. +.+..++..+...|... |++++|.+.|+.+.+.+..|+ ...+..+...+...|++++|.+
T Consensus 56 ~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 134 (225)
T 2vq2_A 56 KVNDKAQESFRQALSIK-PDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEA 134 (225)
T ss_dssp TCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CChHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHH
Confidence 45556678888877654 44678899999999999 999999999999988444444 6788899999999999999999
Q ss_pred HHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 145 LWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 145 ~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
.|++..+..- .+...|..+...|.+.|++++|.+.++...+..-..+...+..+...+...|+.+.|..+++.
T Consensus 135 ~~~~~~~~~~--~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 207 (225)
T 2vq2_A 135 YLKRSLAAQP--QFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQ 207 (225)
T ss_dssp HHHHHHHHST--TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHhCC--CCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 9999988753 445689999999999999999999999988753224677788888889999999999988765
No 33
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.88 E-value=2.4e-07 Score=79.95 Aligned_cols=144 Identities=10% Similarity=-0.034 Sum_probs=121.8
Q ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 021583 72 VYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFL 151 (310)
Q Consensus 72 ~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~ 151 (310)
+...+++..+.. +.+...+..+...|.+.|++++|.+.++...+.. ..+..++..+...|...|++++|.+.|++..+
T Consensus 157 A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 234 (327)
T 3cv0_A 157 CRTLLHAALEMN-PNDAQLHASLGVLYNLSNNYDSAAANLRRAVELR-PDDAQLWNKLGATLANGNRPQEALDAYNRALD 234 (327)
T ss_dssp HHHHHHHHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhC-CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 367777776655 3478899999999999999999999999988663 44678999999999999999999999999988
Q ss_pred cCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC-----------CHHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 152 DHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP-----------NVSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 152 ~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p-----------~~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
..- .+..+|..+...|.+.|++++|.+.++...+..-.. +...|..+..+|.+.|+.++|..++++
T Consensus 235 ~~~--~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 311 (327)
T 3cv0_A 235 INP--GYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVELTYAQ 311 (327)
T ss_dssp HCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHHHHTTC
T ss_pred cCC--CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 753 445689999999999999999999999987643221 368899999999999999999999765
No 34
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.87 E-value=7.4e-07 Score=75.02 Aligned_cols=142 Identities=11% Similarity=-0.066 Sum_probs=111.5
Q ss_pred HHHHHHHHHcCCC---CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 021583 73 YGALDSFIAWELE---FPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI 149 (310)
Q Consensus 73 ~~~~~~m~~~~~~---p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m 149 (310)
...++++.+.... .+..++..+...|...|++++|.+.|+...+.. +.+..+|..+...|...|++++|.+.|++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 103 (275)
T 1xnf_A 25 LARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIR-PDMPEVFNYLGIYLTQAGNFDAAYEAFDSV 103 (275)
T ss_dssp HHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcC-CCcHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 6667777665321 135678888899999999999999999988663 346788999999999999999999999998
Q ss_pred HhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 150 FLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 150 ~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
.+..- .+..+|..+...|.+.|++++|.+.++.+.+. .|+...+..++..+...|++++|...+++
T Consensus 104 l~~~~--~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~--~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 169 (275)
T 1xnf_A 104 LELDP--TYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD--DPNDPFRSLWLYLAEQKLDEKQAKEVLKQ 169 (275)
T ss_dssp HHHCT--TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HhcCc--cccHHHHHHHHHHHHhccHHHHHHHHHHHHHh--CCCChHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 88643 34468899999999999999999999998874 45555555566666777899999888854
No 35
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.86 E-value=4.6e-07 Score=79.09 Aligned_cols=184 Identities=10% Similarity=0.019 Sum_probs=141.9
Q ss_pred cHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHH
Q 021583 68 VKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147 (310)
Q Consensus 68 ~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~ 147 (310)
..+.|...+++..+.. +.+..++..+...+...|++++|...|+...+.. +-+...+..+...|...|++++|.+.|+
T Consensus 18 ~~~~A~~~~~~~l~~~-p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 95 (359)
T 3ieg_A 18 QLADALSQFHAAVDGD-PDNYIAYYRRATVFLAMGKSKAALPDLTKVIALK-MDFTAARLQRGHLLLKQGKLDEAEDDFK 95 (359)
T ss_dssp CHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhC-cccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCcchHHHHHHHHHHHcCChHHHHHHHH
Confidence 3444477777777654 4467899999999999999999999999988663 3367899999999999999999999999
Q ss_pred HHHhcCCCC-ChHHHHHHH------------HHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHH
Q 021583 148 KIFLDHLEG-TPRIFFDKM------------ISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYE 214 (310)
Q Consensus 148 ~m~~~~~~~-~~~~~y~~l------------i~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~ 214 (310)
+..+..-.. .+...+..+ ...+...|++++|.++++.+.+.. +.+...+..+..+|...|++++|.
T Consensus 96 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~A~ 174 (359)
T 3ieg_A 96 KVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVC-VWDAELRELRAECFIKEGEPRKAI 174 (359)
T ss_dssp HHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCchHHHHHHHHHHHHCCCHHHHH
Confidence 998763200 233355555 578899999999999999998753 236788999999999999999999
Q ss_pred HHHHhCCCCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhc
Q 021583 215 KLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNES 265 (310)
Q Consensus 215 ~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~ 265 (310)
..+++.... .+.+...+..+... ..|++++|.+.++....
T Consensus 175 ~~~~~~~~~-----------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 216 (359)
T 3ieg_A 175 SDLKAASKL-----------KSDNTEAFYKISTLYYQLGDHELSLSEVRECLK 216 (359)
T ss_dssp HHHHHHHTT-----------CSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-----------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 998763211 02233455555555 88999999999987764
No 36
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=98.86 E-value=1e-07 Score=75.00 Aligned_cols=163 Identities=12% Similarity=0.067 Sum_probs=131.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHH
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~ 167 (310)
...+..+...+...|++++|.+.|+.+.+. ...+..++..+...+...|++++|.+.+++..+..- .+...|..+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~--~~~~~~~~~a~ 84 (186)
T 3as5_A 8 QVYYRDKGISHAKAGRYSQAVMLLEQVYDA-DAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAP--DNVKVATVLGL 84 (186)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHTTTCCT-TSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-CccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC--CCHHHHHHHHH
Confidence 356778888899999999999999987754 235688899999999999999999999999988743 45568999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccchheeccCcccCChhhhhHhhh
Q 021583 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDS 247 (310)
Q Consensus 168 ~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~ 247 (310)
.|...|++++|.+.++...+.. +.+...+..+...|...|++++|...+++.... .+.+...+..+..
T Consensus 85 ~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-----------~~~~~~~~~~la~ 152 (186)
T 3as5_A 85 TYVQVQKYDLAVPLLIKVAEAN-PINFNVRFRLGVALDNLGRFDEAIDSFKIALGL-----------RPNEGKVHRAIAF 152 (186)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----------CTTCHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHhcC-cHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhc-----------CccchHHHHHHHH
Confidence 9999999999999999988753 346788999999999999999999998763100 0122345555555
Q ss_pred c--cCCChhhHHhhhchhhc
Q 021583 248 A--TEGKTNEVETTKNPNES 265 (310)
Q Consensus 248 ~--~~g~~~~a~~~~~~m~~ 265 (310)
. ..|++++|.+.++....
T Consensus 153 ~~~~~~~~~~A~~~~~~~~~ 172 (186)
T 3as5_A 153 SYEQMGRHEEALPHFKKANE 172 (186)
T ss_dssp HHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHH
Confidence 5 88999999999877643
No 37
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.86 E-value=3.7e-07 Score=78.75 Aligned_cols=191 Identities=9% Similarity=-0.036 Sum_probs=129.9
Q ss_pred CcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCC----------------------------
Q 021583 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKG---------------------------- 118 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g---------------------------- 118 (310)
+..+.|...+++..+.. +.+..++..+...|...|++++|.+.|+...+..
T Consensus 69 ~~~~~A~~~~~~a~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (327)
T 3cv0_A 69 EKDGLAIIALNHARMLD-PKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFF 147 (327)
T ss_dssp TCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTTTC--------------------CC
T ss_pred CCHHHHHHHHHHHHhcC-cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHH
Confidence 44455566666666553 3456677777777777777777777777655321
Q ss_pred --------------------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHH
Q 021583 119 --------------------QGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKM 178 (310)
Q Consensus 119 --------------------~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a 178 (310)
...+..++..+...|.+.|++++|.+.+++..+..- .+..+|..+...|...|++++|
T Consensus 148 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~A 225 (327)
T 3cv0_A 148 FAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRP--DDAQLWNKLGATLANGNRPQEA 225 (327)
T ss_dssp TTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC--CcHHHHHHHHHHHHHcCCHHHH
Confidence 022567778888888899999999999988887643 4446788888899999999999
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhC---CCCccchheeccCcccCChhhhhHhhhc--cCCCh
Q 021583 179 FEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKY---PPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKT 253 (310)
Q Consensus 179 ~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~---~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~ 253 (310)
.+.++...+.. +.+..+|..+..+|...|++++|.+.|++. .|+...... ......+...+..+... ..|+.
T Consensus 226 ~~~~~~a~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~g~~ 302 (327)
T 3cv0_A 226 LDAYNRALDIN-PGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTG--EASREATRSMWDFFRMLLNVMNRP 302 (327)
T ss_dssp HHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-------CCTHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHcC-CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccc--cchhhcCHHHHHHHHHHHHhcCCH
Confidence 99998887643 235778888888999999999998888762 122100000 00001134555555555 88999
Q ss_pred hhHHhhhchh
Q 021583 254 NEVETTKNPN 263 (310)
Q Consensus 254 ~~a~~~~~~m 263 (310)
++|...++..
T Consensus 303 ~~A~~~~~~~ 312 (327)
T 3cv0_A 303 DLVELTYAQN 312 (327)
T ss_dssp HHHHHHTTCC
T ss_pred HHHHHHHHHH
Confidence 9998887643
No 38
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.86 E-value=7.1e-10 Score=100.48 Aligned_cols=115 Identities=13% Similarity=0.075 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHH
Q 021583 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168 (310)
Q Consensus 89 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~ 168 (310)
.+|..+..++.+.|++++|.+.|.+ .+|..+|..++.++...|++++|+++++..++. . .+..+.+.|+.+
T Consensus 33 ~vWs~La~A~l~~g~~~eAIdsfik------a~D~~~y~~V~~~ae~~g~~EeAi~yl~~ark~-~--~~~~i~~~Li~~ 103 (449)
T 1b89_A 33 AVWSQLAKAQLQKGMVKEAIDSYIK------ADDPSSYMEVVQAANTSGNWEELVKYLQMARKK-A--RESYVETELIFA 103 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHc------CCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHh-C--ccchhHHHHHHH
Confidence 3666666666666666666666643 245556666666666666666666655544442 2 223456666666
Q ss_pred HHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 169 YYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 169 ~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
|.+.|++++++++++ .|+..+|..+...|...|++++|...|..
T Consensus 104 Y~Klg~l~e~e~f~~-------~pn~~a~~~IGd~~~~~g~yeeA~~~Y~~ 147 (449)
T 1b89_A 104 LAKTNRLAELEEFIN-------GPNNAHIQQVGDRCYDEKMYDAAKLLYNN 147 (449)
T ss_dssp -----CHHHHTTTTT-------CC----------------CTTTHHHHHHH
T ss_pred HHHhCCHHHHHHHHc-------CCcHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 666666666665553 25555666666666666666666666544
No 39
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.85 E-value=1.5e-08 Score=85.56 Aligned_cols=168 Identities=11% Similarity=0.066 Sum_probs=123.6
Q ss_pred hHHHHHHHhcCcCchHhHHHHHHhcCCcHHHHHHHHHHHHHc------CCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 021583 41 RVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAW------ELEF-PLITVKKALKTLENEKDWKRIIQVTKW 113 (310)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~m~~~------~~~p-~~~~~~~li~~~~~~~~~~~a~~~~~~ 113 (310)
....+..+...+...+++.++ ...+++..+. +-.| ...++..+...|...|++++|.+.|+.
T Consensus 42 ~~~~~~~l~~~~~~~g~~~~A-----------~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 110 (283)
T 3edt_B 42 VATMLNILALVYRDQNKYKEA-----------AHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKR 110 (283)
T ss_dssp HHHHHHHHHHHHHHTTCHHHH-----------HHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHH-----------HHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 334444444445566666666 3444343322 2222 356899999999999999999999998
Q ss_pred HHHC------C-CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc------CCCCChHHHHHHHHHHHHHcCCHHHHHH
Q 021583 114 MLSK------G-QGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD------HLEGTPRIFFDKMISIYYNRGMHEKMFE 180 (310)
Q Consensus 114 m~~~------g-~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~------~~~~~~~~~y~~li~~~~~~g~~~~a~~ 180 (310)
.... . ......+|..+...|...|++++|.+.|++..+. ...+....+|..+...|...|++++|.+
T Consensus 111 al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 190 (283)
T 3edt_B 111 ALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAET 190 (283)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 7754 1 1234678899999999999999999999998876 2111223489999999999999999999
Q ss_pred HHHHHHHCC-----------------------------------------------CCC-CHHHHHHHHHHHHhcCCHHH
Q 021583 181 IFADMEELG-----------------------------------------------VRP-NVSIVSMMGNAFQKLGMLDK 212 (310)
Q Consensus 181 l~~~m~~~g-----------------------------------------------~~p-~~~ty~~li~~~~~~g~~~~ 212 (310)
++++..+.. ..| ...++..+...|...|++++
T Consensus 191 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 270 (283)
T 3edt_B 191 LYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGALYRRQGKLEA 270 (283)
T ss_dssp HHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCCCCHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHH
Confidence 999887530 113 24678889999999999999
Q ss_pred HHHHHHh
Q 021583 213 YEKLKKK 219 (310)
Q Consensus 213 a~~l~~~ 219 (310)
|..+|++
T Consensus 271 A~~~~~~ 277 (283)
T 3edt_B 271 AHTLEDC 277 (283)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999876
No 40
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.82 E-value=2e-07 Score=76.84 Aligned_cols=165 Identities=13% Similarity=0.077 Sum_probs=134.7
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHH
Q 021583 85 EFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDK 164 (310)
Q Consensus 85 ~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~ 164 (310)
+++...+..+-..+.+.|++++|...|+...+.. +-+...+..+-..+.+.|++++|+..|++..+.. |.+...|..
T Consensus 2 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~--P~~~~a~~~ 78 (217)
T 2pl2_A 2 QTAEQNPLRLGVQLYALGRYDAALTLFERALKEN-PQDPEALYWLARTQLKLGLVNPALENGKTLVART--PRYLGGYMV 78 (217)
T ss_dssp --CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTS-SSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCcHHHHHH
Confidence 4567788889999999999999999999988652 4567889999999999999999999999999875 345568999
Q ss_pred HHHHHHHc-----------CCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccchheecc
Q 021583 165 MISIYYNR-----------GMHEKMFEIFADMEELGVRP-NVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKG 232 (310)
Q Consensus 165 li~~~~~~-----------g~~~~a~~l~~~m~~~g~~p-~~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~~~~~~ 232 (310)
+-..|... |++++|...++...+. .| +...|..+-.+|...|++++|...|++. .+
T Consensus 79 lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~--~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~a----------l~ 146 (217)
T 2pl2_A 79 LSEAYVALYRQAEDRERGKGYLEQALSVLKDAERV--NPRYAPLHLQRGLVYALLGERDKAEASLKQA----------LA 146 (217)
T ss_dssp HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH----------HH
T ss_pred HHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHh--CcccHHHHHHHHHHHHHcCChHHHHHHHHHH----------Hh
Confidence 99999999 9999999999998874 46 4788999999999999999999998762 11
Q ss_pred CcccCChhhhhHhhhc--cCCChhhHHhhhchhhcC
Q 021583 233 KRVRIPAKPKYELDSA--TEGKTNEVETTKNPNESS 266 (310)
Q Consensus 233 ~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~~ 266 (310)
.. .+...+..+-.. ..|++++|...++.....
T Consensus 147 ~~--~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 180 (217)
T 2pl2_A 147 LE--DTPEIRSALAELYLSMGRLDEALAQYAKALEQ 180 (217)
T ss_dssp HC--CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred cc--cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 11 234445555555 899999999999887653
No 41
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.82 E-value=2.8e-06 Score=74.05 Aligned_cols=194 Identities=9% Similarity=-0.004 Sum_probs=142.5
Q ss_pred CcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHH
Q 021583 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELW 146 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~ 146 (310)
+..+.|...+++..+.. +.+...+..+...|.+.|++++|.+.++...+.. +.+..++..+...|...|++++|.+.|
T Consensus 134 ~~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~ 211 (359)
T 3ieg_A 134 ADYTAAITFLDKILEVC-VWDAELRELRAECFIKEGEPRKAISDLKAASKLK-SDNTEAFYKISTLYYQLGDHELSLSEV 211 (359)
T ss_dssp TCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-SCCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhC-CCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 45566677788777654 4567888999999999999999999999988663 457788999999999999999999999
Q ss_pred HHHHhcCCCCChHHHHH------------HHHHHHHHcCCHHHHHHHHHHHHHCCCCCC-H----HHHHHHHHHHHhcCC
Q 021583 147 TKIFLDHLEGTPRIFFD------------KMISIYYNRGMHEKMFEIFADMEELGVRPN-V----SIVSMMGNAFQKLGM 209 (310)
Q Consensus 147 ~~m~~~~~~~~~~~~y~------------~li~~~~~~g~~~~a~~l~~~m~~~g~~p~-~----~ty~~li~~~~~~g~ 209 (310)
++..+..- .+...+. .+...+.+.|++++|.+.++...+.. |+ . ..|..+..+|...|+
T Consensus 212 ~~a~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~~~~~la~~~~~~~~ 287 (359)
T 3ieg_A 212 RECLKLDQ--DHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTE--PSVAEYTVRSKERICHCFSKDEK 287 (359)
T ss_dssp HHHHHHCT--TCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CSSHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHhhCc--cchHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--CCchHHHHHHHHHHHHHHHHccC
Confidence 99888754 2223333 23666889999999999999988753 43 2 335567788999999
Q ss_pred HHHHHHHHHhCCCCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhcCCCCCchhhhhhhh
Q 021583 210 LDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNESSEEPEAAANLNESL 279 (310)
Q Consensus 210 ~~~a~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll 279 (310)
+++|...+++.... .+.+...+..+... ..|++++|.+.++...... |+.......+
T Consensus 288 ~~~A~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~--p~~~~~~~~l 346 (359)
T 3ieg_A 288 PVEAIRICSEVLQM-----------EPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHN--ENDQQIREGL 346 (359)
T ss_dssp HHHHHHHHHHHHHH-----------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC--TTCHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--CCChHHHHHH
Confidence 99999998762100 02234455555555 8999999999998887643 5544333333
No 42
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.82 E-value=4.8e-08 Score=82.43 Aligned_cols=148 Identities=14% Similarity=0.115 Sum_probs=116.3
Q ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHC------CCCC-CHHHHHHHHHHHHhcCCHHHHHH
Q 021583 72 VYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSK------GQGR-TMGTYFLLLNALAEDGRLDEAEE 144 (310)
Q Consensus 72 ~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~------g~~p-~~~ty~~ll~~~~~~g~~~~A~~ 144 (310)
+.+++.+....+.+....++..+...|...|++++|...|+...+. +-.| ...++..+...|...|++++|.+
T Consensus 27 al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 106 (283)
T 3edt_B 27 ALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEP 106 (283)
T ss_dssp HHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHH
T ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHH
Confidence 3555555544343335678999999999999999999999997754 2223 46788999999999999999999
Q ss_pred HHHHHHhcC-----CCCCh-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHC------CCCCC-HHHHHHHHHHHHhcCCHH
Q 021583 145 LWTKIFLDH-----LEGTP-RIFFDKMISIYYNRGMHEKMFEIFADMEEL------GVRPN-VSIVSMMGNAFQKLGMLD 211 (310)
Q Consensus 145 ~~~~m~~~~-----~~~~~-~~~y~~li~~~~~~g~~~~a~~l~~~m~~~------g~~p~-~~ty~~li~~~~~~g~~~ 211 (310)
.|++..+.. -..+. ..+|..+...|...|++++|.+.+++..+. +-.|+ ..++..+..+|...|+++
T Consensus 107 ~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 186 (283)
T 3edt_B 107 LCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQ 186 (283)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHH
Confidence 999888661 11122 348999999999999999999999998764 22333 478899999999999999
Q ss_pred HHHHHHHh
Q 021583 212 KYEKLKKK 219 (310)
Q Consensus 212 ~a~~l~~~ 219 (310)
+|..++++
T Consensus 187 ~A~~~~~~ 194 (283)
T 3edt_B 187 DAETLYKE 194 (283)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999976
No 43
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.80 E-value=2.5e-07 Score=89.86 Aligned_cols=162 Identities=10% Similarity=0.036 Sum_probs=133.3
Q ss_pred hHHHHHHHhcCcCchHhHHHHHHhcCCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCC
Q 021583 41 RVWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQG 120 (310)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~ 120 (310)
+.-.++.+...+.+.+++.+| ...+++..+.. +-+..+|+.+-..|.+.|++++|.+.|++..+.. .
T Consensus 8 ~a~al~nLG~~~~~~G~~~eA-----------i~~~~kAl~l~-P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~-P 74 (723)
T 4gyw_A 8 HADSLNNLANIKREQGNIEEA-----------VRLYRKALEVF-PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS-P 74 (723)
T ss_dssp HHHHHHHHHHHHHHTTCHHHH-----------HHHHHHHHHHC-SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-T
T ss_pred cHHHHHHHHHHHHHcCCHHHH-----------HHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-C
Confidence 344555555556666777777 66666666554 3357899999999999999999999999988653 2
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCC-HHHHHH
Q 021583 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN-VSIVSM 199 (310)
Q Consensus 121 p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~-~~ty~~ 199 (310)
-+..+|..|-..|.+.|++++|++.|++..+.. +.+...|+.+-..|.+.|++++|++.|++..+. .|+ ...|..
T Consensus 75 ~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~--P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l--~P~~~~a~~~ 150 (723)
T 4gyw_A 75 TFADAYSNMGNTLKEMQDVQGALQCYTRAIQIN--PAFADAHSNLASIHKDSGNIPEAIASYRTALKL--KPDFPDAYCN 150 (723)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CSCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCChHHHhh
Confidence 357899999999999999999999999998874 345568999999999999999999999998874 564 688999
Q ss_pred HHHHHHhcCCHHHHHHHHHh
Q 021583 200 MGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 200 li~~~~~~g~~~~a~~l~~~ 219 (310)
|..+|...|++++|.+.+++
T Consensus 151 L~~~l~~~g~~~~A~~~~~k 170 (723)
T 4gyw_A 151 LAHCLQIVCDWTDYDERMKK 170 (723)
T ss_dssp HHHHHHHTTCCTTHHHHHHH
T ss_pred hhhHHHhcccHHHHHHHHHH
Confidence 99999999999999998875
No 44
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.79 E-value=5.3e-06 Score=70.20 Aligned_cols=175 Identities=11% Similarity=-0.032 Sum_probs=133.2
Q ss_pred cHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHh----cCCH
Q 021583 68 VKEEVYGALDSFIAWELEFPLITVKKALKTLEN----EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAE----DGRL 139 (310)
Q Consensus 68 ~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~----~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~----~g~~ 139 (310)
..++|...+++..+. -+..++..+-..|.. .+++++|.+.|+...+.+ +..++..+-..|.. .++.
T Consensus 21 ~~~~A~~~~~~a~~~---~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~ 94 (273)
T 1ouv_A 21 DFTQAKKYFEKACDL---KENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN---YSNGCHLLGNLYYSGQGVSQNT 94 (273)
T ss_dssp CHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCH
T ss_pred CHHHHHHHHHHHHHC---CCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhCCCCcccCH
Confidence 344457777776663 346778888888888 999999999999988776 77888888888988 9999
Q ss_pred HHHHHHHHHHHhcCCCCChHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHh----cCCHH
Q 021583 140 DEAEELWTKIFLDHLEGTPRIFFDKMISIYYN----RGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK----LGMLD 211 (310)
Q Consensus 140 ~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~----~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~----~g~~~ 211 (310)
++|.+.|++..+.+ +...+..+-..|.. .+++++|.+.|+...+.+ +...+..+-..|.. .++.+
T Consensus 95 ~~A~~~~~~a~~~~----~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~~~~~~~~~~ 167 (273)
T 1ouv_A 95 NKALQYYSKACDLK----YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN---DGDGCTILGSLYDAGRGTPKDLK 167 (273)
T ss_dssp HHHHHHHHHHHHTT----CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHH
T ss_pred HHHHHHHHHHHHcC----CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC---cHHHHHHHHHHHHcCCCCCCCHH
Confidence 99999999988875 23578888888888 999999999999988865 56777888888888 89999
Q ss_pred HHHHHHHhCCCCccchheeccCcccCChhhhhHhhhc--c----CCChhhHHhhhchhhcCCC
Q 021583 212 KYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSA--T----EGKTNEVETTKNPNESSEE 268 (310)
Q Consensus 212 ~a~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~--~----~g~~~~a~~~~~~m~~~~~ 268 (310)
+|...|++... . .+...+..+-.. . .++.++|.++++.....+-
T Consensus 168 ~A~~~~~~a~~----------~---~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~ 217 (273)
T 1ouv_A 168 KALASYDKACD----------L---KDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN 217 (273)
T ss_dssp HHHHHHHHHHH----------T---TCHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHH----------C---CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC
Confidence 99999876210 0 112222223222 3 7889999998887766654
No 45
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.77 E-value=4.4e-07 Score=88.18 Aligned_cols=158 Identities=9% Similarity=0.029 Sum_probs=132.4
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHH
Q 021583 87 PLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMI 166 (310)
Q Consensus 87 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li 166 (310)
+..+|+.|-..|.+.|++++|.+.|++..+.. .-+..+|..|-..|.+.|++++|++.|++..+.. |.....|+.+-
T Consensus 8 ~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~-P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~--P~~~~a~~nLg 84 (723)
T 4gyw_A 8 HADSLNNLANIKREQGNIEEAVRLYRKALEVF-PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS--PTFADAYSNMG 84 (723)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHH
Confidence 36789999999999999999999999988662 3357899999999999999999999999998875 34556899999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHh---CCCCccchheeccCcccCChhhh
Q 021583 167 SIYYNRGMHEKMFEIFADMEELGVRP-NVSIVSMMGNAFQKLGMLDKYEKLKKK---YPPPKWEYRYIKGKRVRIPAKPK 242 (310)
Q Consensus 167 ~~~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~li~~~~~~g~~~~a~~l~~~---~~p~~~~~~~~~~~~~~~~~~~~ 242 (310)
..|...|++++|++.|++..+. .| +...|+.+..+|...|++++|...|++ +.|+ +...+
T Consensus 85 ~~l~~~g~~~~A~~~~~kAl~l--~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~--------------~~~a~ 148 (723)
T 4gyw_A 85 NTLKEMQDVQGALQCYTRAIQI--NPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPD--------------FPDAY 148 (723)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC--------------CHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--------------ChHHH
Confidence 9999999999999999998874 46 478999999999999999999999886 2333 34455
Q ss_pred hHhhhc--cCCChhhHHhhhchh
Q 021583 243 YELDSA--TEGKTNEVETTKNPN 263 (310)
Q Consensus 243 ~~li~~--~~g~~~~a~~~~~~m 263 (310)
..|... ..|++++|++.+++.
T Consensus 149 ~~L~~~l~~~g~~~~A~~~~~ka 171 (723)
T 4gyw_A 149 CNLAHCLQIVCDWTDYDERMKKL 171 (723)
T ss_dssp HHHHHHHHHTTCCTTHHHHHHHH
T ss_pred hhhhhHHHhcccHHHHHHHHHHH
Confidence 555555 889999988887554
No 46
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.76 E-value=6.9e-08 Score=82.82 Aligned_cols=176 Identities=15% Similarity=0.137 Sum_probs=131.2
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHC-------CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc------C
Q 021583 87 PLITVKKALKTLENEKDWKRIIQVTKWMLSK-------GQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD------H 153 (310)
Q Consensus 87 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~-------g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~------~ 153 (310)
+..++..+...|...|++++|..+|+...+. .......++..+...|...|++++|.+.|++..+. +
T Consensus 26 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 105 (311)
T 3nf1_A 26 RLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGK 105 (311)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCC
Confidence 3567889999999999999999999998763 23345678889999999999999999999988875 2
Q ss_pred CCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHC------CCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccc
Q 021583 154 LEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL------GVRP-NVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWE 226 (310)
Q Consensus 154 ~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~------g~~p-~~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~ 226 (310)
-.+....+|..+...|...|++++|.+.+++..+. +-.| ....+..+...|...|++++|..+|++....
T Consensus 106 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~--- 182 (311)
T 3nf1_A 106 DHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEI--- 182 (311)
T ss_dssp TCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH---
T ss_pred CChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH---
Confidence 21122348999999999999999999999998754 2233 3477889999999999999999998762100
Q ss_pred hheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhc
Q 021583 227 YRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNES 265 (310)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~ 265 (310)
+..............+..+... ..|++++|.+.++....
T Consensus 183 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 223 (311)
T 3nf1_A 183 YQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILT 223 (311)
T ss_dssp HHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 0000001112223445555555 88999999999987764
No 47
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.76 E-value=5.7e-07 Score=74.79 Aligned_cols=150 Identities=8% Similarity=-0.070 Sum_probs=120.7
Q ss_pred CcHHHHHHHHHHHHHcC--CCCC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCC----------------------
Q 021583 67 NVKEEVYGALDSFIAWE--LEFP----LITVKKALKTLENEKDWKRIIQVTKWMLSKG---------------------- 118 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~--~~p~----~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g---------------------- 118 (310)
+..+.|...+++..+.. ..++ ...+..+...|.+.|++++|.+.|+......
T Consensus 52 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~ 131 (258)
T 3uq3_A 52 GEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAE 131 (258)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHH
Confidence 33444466666655432 2223 5788999999999999999999999988632
Q ss_pred --CCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHH
Q 021583 119 --QGR-TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVS 195 (310)
Q Consensus 119 --~~p-~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ 195 (310)
..| +...+..+...+...|++++|.+.|++..+..- .+..+|..+...|.+.|++++|.+.++...+.. +.+..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~--~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-~~~~~ 208 (258)
T 3uq3_A 132 AYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAP--EDARGYSNRAAALAKLMSFPEAIADCNKAIEKD-PNFVR 208 (258)
T ss_dssp HHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHH
T ss_pred HHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCc--ccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-HHHHH
Confidence 222 356788889999999999999999999998753 455689999999999999999999999998753 23578
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 196 IVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 196 ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
.|..+..+|...|++++|...|++
T Consensus 209 ~~~~l~~~~~~~g~~~~A~~~~~~ 232 (258)
T 3uq3_A 209 AYIRKATAQIAVKEYASALETLDA 232 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHH
Confidence 899999999999999999999876
No 48
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.73 E-value=8.5e-07 Score=81.63 Aligned_cols=150 Identities=9% Similarity=-0.122 Sum_probs=116.6
Q ss_pred CcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHH
Q 021583 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELW 146 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~ 146 (310)
+..+.|...++++.+.+ |+...|..+..+|.+.|++++|.+.|+.+.+.+ +.+..+|..+...|.+.|++++|...|
T Consensus 20 g~~~~A~~~~~~al~~~--p~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~ 96 (514)
T 2gw1_A 20 KKYDDAIKYYNWALELK--EDPVFYSNLSACYVSVGDLKKVVEMSTKALELK-PDYSKVLLRRASANEGLGKFADAMFDL 96 (514)
T ss_dssp SCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-SCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcC--ccHHHHHhHHHHHHHHhhHHHHHHHHHHHhccC-hHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 34445588888888776 789999999999999999999999999998764 456789999999999999999999999
Q ss_pred HHHHhcCCCC----------------------------------------------------------------------
Q 021583 147 TKIFLDHLEG---------------------------------------------------------------------- 156 (310)
Q Consensus 147 ~~m~~~~~~~---------------------------------------------------------------------- 156 (310)
+++.+.+-..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (514)
T 2gw1_A 97 SVLSLNGDFNDASIEPMLERNLNKQAMSKLKEKFGDIDTATATPTELSTQPAKERKDKQENLPSVTSMASFFGIFKPELT 176 (514)
T ss_dssp HHHHHSSSCCGGGTHHHHHHHHHHHHHHHHTTC---------------------------CCCCHHHHHHHHTTSCCCCC
T ss_pred HHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCChhhHHHhhccCCchhHHHHHHHhhcCHHHH
Confidence 9987664200
Q ss_pred -------ChHHHHHHHHHHHH---HcCCHHHHHHHHHHHHH-----CCCC-------C-CHHHHHHHHHHHHhcCCHHHH
Q 021583 157 -------TPRIFFDKMISIYY---NRGMHEKMFEIFADMEE-----LGVR-------P-NVSIVSMMGNAFQKLGMLDKY 213 (310)
Q Consensus 157 -------~~~~~y~~li~~~~---~~g~~~~a~~l~~~m~~-----~g~~-------p-~~~ty~~li~~~~~~g~~~~a 213 (310)
.+...+..+...+. +.|++++|.++++++.+ ..-. | +..+|..+..+|...|++++|
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 256 (514)
T 2gw1_A 177 FANYDESNEADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFLKNDPLGA 256 (514)
T ss_dssp CSSCCSSCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHHSSCHHHH
T ss_pred HHHhcCCcHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHHCCCHHHH
Confidence 00112222223333 38999999999999987 3112 2 357888899999999999999
Q ss_pred HHHHHh
Q 021583 214 EKLKKK 219 (310)
Q Consensus 214 ~~l~~~ 219 (310)
...|++
T Consensus 257 ~~~~~~ 262 (514)
T 2gw1_A 257 HEDIKK 262 (514)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999976
No 49
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.67 E-value=2e-06 Score=63.44 Aligned_cols=117 Identities=17% Similarity=0.173 Sum_probs=97.9
Q ss_pred cHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHH
Q 021583 68 VKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147 (310)
Q Consensus 68 ~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~ 147 (310)
..+.+...++++.+.+ +.+...+..+...+...|++++|..+|+.+...+ ..+...+..+...+...|++++|.++|+
T Consensus 16 ~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 93 (136)
T 2fo7_A 16 DYDEAIEYYQKALELD-PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PRSAEAWYNLGNAYYKQGDYDEAIEYYQ 93 (136)
T ss_dssp CHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcC-CcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHC-CCchHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 3444577777777654 4467888899999999999999999999988664 4567888999999999999999999999
Q ss_pred HHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 021583 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188 (310)
Q Consensus 148 ~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~ 188 (310)
++.+..- .+..+|..+...|.+.|++++|.+.++++...
T Consensus 94 ~~~~~~~--~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 132 (136)
T 2fo7_A 94 KALELDP--RSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 132 (136)
T ss_dssp HHHHHCT--TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHhCC--CChHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 9988753 44568899999999999999999999998764
No 50
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.66 E-value=8.9e-06 Score=68.79 Aligned_cols=176 Identities=8% Similarity=-0.077 Sum_probs=139.4
Q ss_pred CCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHh----cC
Q 021583 66 SNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN----EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAE----DG 137 (310)
Q Consensus 66 ~~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~----~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~----~g 137 (310)
.+..+++...+++..+.+ +..++..+-..|.. .+++++|.+.|+...+.+ +..++..+-..|.. .+
T Consensus 55 ~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~~~~~~~ 128 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDLN---YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK---YAEGCASLGGIYHDGKVVTR 128 (273)
T ss_dssp CCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHCSSSCC
T ss_pred CCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC---CccHHHHHHHHHHcCCCccc
Confidence 445666688888887776 67888899999999 999999999999988875 78899999999999 99
Q ss_pred CHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHh----cCC
Q 021583 138 RLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYN----RGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK----LGM 209 (310)
Q Consensus 138 ~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~----~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~----~g~ 209 (310)
+.++|.+.|++..+.+ +...+..+-..|.. .+++++|.+.|+...+.+ +...+..+-..|.. .++
T Consensus 129 ~~~~A~~~~~~a~~~~----~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~ 201 (273)
T 1ouv_A 129 DFKKAVEYFTKACDLN----DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK---DSPGCFNAGNMYHHGEGATKN 201 (273)
T ss_dssp CHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTCSSCCC
T ss_pred CHHHHHHHHHHHHhcC----cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCcc
Confidence 9999999999999875 33578888888888 999999999999988764 56788889999999 999
Q ss_pred HHHHHHHHHhCCCCccchheeccCcccCChhhhhHhhhc--c----CCChhhHHhhhchhhcCC
Q 021583 210 LDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSA--T----EGKTNEVETTKNPNESSE 267 (310)
Q Consensus 210 ~~~a~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~--~----~g~~~~a~~~~~~m~~~~ 267 (310)
.++|...|++... .+ +...+..|-.. . .++.++|.++++.-...+
T Consensus 202 ~~~A~~~~~~a~~----------~~---~~~a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~ 252 (273)
T 1ouv_A 202 FKEALARYSKACE----------LE---NGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLG 252 (273)
T ss_dssp HHHHHHHHHHHHH----------TT---CHHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh----------CC---CHHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHcC
Confidence 9999999876210 00 12222222222 3 788888888887766554
No 51
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.65 E-value=1.8e-06 Score=80.11 Aligned_cols=147 Identities=11% Similarity=0.001 Sum_probs=125.5
Q ss_pred CcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHH
Q 021583 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELW 146 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~ 146 (310)
+..+.+...+++..+.. |+...+..+...|.+.|++++|.+.|+...+.. ..+..+|..+...|...|++++|.+.|
T Consensus 257 ~~~~~A~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~ 333 (537)
T 3fp2_A 257 NNLLDAQVLLQESINLH--PTPNSYIFLALTLADKENSQEFFKFFQKAVDLN-PEYPPTYYHRGQMYFILQDYKNAKEDF 333 (537)
T ss_dssp TCHHHHHHHHHHHHHHC--CCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcC--CCchHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 44566778888877754 557889999999999999999999999988663 346888999999999999999999999
Q ss_pred HHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 147 TKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 147 ~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
++..+..- .+...|..+...|...|++++|.+.+++..+.. +.+...|..+...|...|++++|...|++
T Consensus 334 ~~a~~~~~--~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 403 (537)
T 3fp2_A 334 QKAQSLNP--ENVYPYIQLACLLYKQGKFTESEAFFNETKLKF-PTLPEVPTFFAEILTDRGDFDTAIKQYDI 403 (537)
T ss_dssp HHHHHHCT--TCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCTHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHhCC--CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99998753 344689999999999999999999999998753 23467899999999999999999999976
No 52
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.65 E-value=1e-05 Score=70.10 Aligned_cols=180 Identities=10% Similarity=-0.054 Sum_probs=86.7
Q ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHHH-------hcCCH-------HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcC
Q 021583 72 VYGALDSFIAWELEFPLITVKKALKTLE-------NEKDW-------KRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDG 137 (310)
Q Consensus 72 ~~~~~~~m~~~~~~p~~~~~~~li~~~~-------~~~~~-------~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g 137 (310)
|..++++..... +-+...|..+...+. +.|++ ++|..+|+...+.-..-+...|..+...+.+.|
T Consensus 35 a~~~~~~al~~~-p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~ 113 (308)
T 2ond_A 35 VMFAYEQCLLVL-GHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRM 113 (308)
T ss_dssp HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHc-CCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcC
Confidence 344444444432 234445555554443 23553 566666666554211223445666666666666
Q ss_pred CHHHHHHHHHHHHhcCCCCChHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH-hcCCHHHHHH
Q 021583 138 RLDEAEELWTKIFLDHLEGTPRI-FFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQ-KLGMLDKYEK 215 (310)
Q Consensus 138 ~~~~A~~~~~~m~~~~~~~~~~~-~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~-~~g~~~~a~~ 215 (310)
++++|.++|++..+..- .+.. .|..+...+.+.|++++|.++|+...+.. +++...|........ ..|+.++|..
T Consensus 114 ~~~~A~~~~~~al~~~p--~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-p~~~~~~~~~a~~~~~~~~~~~~A~~ 190 (308)
T 2ond_A 114 KYEKVHSIYNRLLAIED--IDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDA-RTRHHVYVTAALMEYYCSKDKSVAFK 190 (308)
T ss_dssp CHHHHHHHHHHHHTSSS--SCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTST-TCCTHHHHHHHHHHHHTSCCHHHHHH
T ss_pred CHHHHHHHHHHHHhccc--cCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCHHHHHH
Confidence 66666666666665321 1122 56666666666666666666666655432 112233332222211 2466666666
Q ss_pred HHHhCCCCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhcC
Q 021583 216 LKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNESS 266 (310)
Q Consensus 216 l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~~ 266 (310)
+|++... . .+.+...|..+... ..|+.++|...+++....
T Consensus 191 ~~~~al~----------~-~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 191 IFELGLK----------K-YGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp HHHHHHH----------H-HTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHS
T ss_pred HHHHHHH----------h-CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 6544100 0 01123344444444 556666666666555554
No 53
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.65 E-value=3.9e-07 Score=83.89 Aligned_cols=183 Identities=8% Similarity=-0.040 Sum_probs=143.7
Q ss_pred CcHHHHHHHHHHHHH-----cCC--------CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q 021583 67 NVKEEVYGALDSFIA-----WEL--------EFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNAL 133 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~-----~~~--------~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~ 133 (310)
+..+.|...++++.+ ..- +.+..++..+...+...|++++|...|+...+.. |+..++..+...|
T Consensus 203 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~--~~~~~~~~l~~~~ 280 (514)
T 2gw1_A 203 ESYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFLKNDPLGAHEDIKKAIELF--PRVNSYIYMALIM 280 (514)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHC--CCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhC--ccHHHHHHHHHHH
Confidence 555566777777766 311 2235678889999999999999999999988764 3488999999999
Q ss_pred HhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHH
Q 021583 134 AEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKY 213 (310)
Q Consensus 134 ~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a 213 (310)
...|++++|.+.|++..+..- .+...|..+...|...|++++|.+.++...+..- .+...+..+...|...|++++|
T Consensus 281 ~~~~~~~~A~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~A 357 (514)
T 2gw1_A 281 ADRNDSTEYYNYFDKALKLDS--NNSSVYYHRGQMNFILQNYDQAGKDFDKAKELDP-ENIFPYIQLACLAYRENKFDDC 357 (514)
T ss_dssp HTSSCCTTGGGHHHHHHTTCT--TCTHHHHHHHHHHHHTTCTTHHHHHHHHHHHTCS-SCSHHHHHHHHHTTTTTCHHHH
T ss_pred HHCCCHHHHHHHHHHHhhcCc--CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCh-hhHHHHHHHHHHHHHcCCHHHH
Confidence 999999999999999988653 3446899999999999999999999999987532 2567899999999999999999
Q ss_pred HHHHHhCCCCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhc
Q 021583 214 EKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNES 265 (310)
Q Consensus 214 ~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~ 265 (310)
..++++.... .+.+...+..+... ..|++++|.+.++....
T Consensus 358 ~~~~~~~~~~-----------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 400 (514)
T 2gw1_A 358 ETLFSEAKRK-----------FPEAPEVPNFFAEILTDKNDFDKALKQYDLAIE 400 (514)
T ss_dssp HHHHHHHHHH-----------STTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-----------cccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 9998763100 01123445445444 89999999999987754
No 54
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.63 E-value=8.2e-07 Score=82.15 Aligned_cols=143 Identities=8% Similarity=-0.074 Sum_probs=124.5
Q ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhc---------CCHH
Q 021583 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAED---------GRLD 140 (310)
Q Consensus 70 ~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~---------g~~~ 140 (310)
++|...+++..+.. +-+...|..+-..|.+.|++++|.+.|+...+. .|+...+..+-..|... |+++
T Consensus 120 ~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~lg~~~~~~~~~~~~~~~g~~~ 196 (474)
T 4abn_A 120 PEAEVLLSKAVKLE-PELVEAWNQLGEVYWKKGDVTSAHTCFSGALTH--CKNKVSLQNLSMVLRQLQTDSGDEHSRHVM 196 (474)
T ss_dssp HHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT--CCCHHHHHHHHHHHTTCCCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--CCCHHHHHHHHHHHHHhccCChhhhhhhHH
Confidence 55577777777655 345889999999999999999999999998876 47789999999999999 9999
Q ss_pred HHHHHHHHHHhcCCCCChHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHHCCCCC----CHHHHHHHHHHHHhcC
Q 021583 141 EAEELWTKIFLDHLEGTPRIFFDKMISIYYNR--------GMHEKMFEIFADMEELGVRP----NVSIVSMMGNAFQKLG 208 (310)
Q Consensus 141 ~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~--------g~~~~a~~l~~~m~~~g~~p----~~~ty~~li~~~~~~g 208 (310)
+|++.|++..+..- .+...|..+-..|... |++++|.+.|+...+. .| +...|..+..+|...|
T Consensus 197 ~A~~~~~~al~~~p--~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~~~~lg~~~~~~g 272 (474)
T 4abn_A 197 DSVRQAKLAVQMDV--LDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKV--DRKASSNPDLHLNRATLHKYEE 272 (474)
T ss_dssp HHHHHHHHHHHHCT--TCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH--CGGGGGCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCC--CCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHh--CCCcccCHHHHHHHHHHHHHcC
Confidence 99999999998753 4556899999999999 9999999999998875 35 6899999999999999
Q ss_pred CHHHHHHHHHh
Q 021583 209 MLDKYEKLKKK 219 (310)
Q Consensus 209 ~~~~a~~l~~~ 219 (310)
++++|.+.|++
T Consensus 273 ~~~~A~~~~~~ 283 (474)
T 4abn_A 273 SYGEALEGFSQ 283 (474)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99999999876
No 55
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.63 E-value=6.6e-06 Score=71.28 Aligned_cols=182 Identities=9% Similarity=0.016 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCC-HH-HHHHHHHHHHhcCCHHHHHHHHH
Q 021583 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRT-MG-TYFLLLNALAEDGRLDEAEELWT 147 (310)
Q Consensus 70 ~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~-~~-ty~~ll~~~~~~g~~~~A~~~~~ 147 (310)
++|..++++..+.-.+-+...|..+...+.+.|++++|.++|+...+. .|+ .. .|..+...+.+.|++++|.++|+
T Consensus 81 ~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 158 (308)
T 2ond_A 81 DEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAI--EDIDPTLVYIQYMKFARRAEGIKSGRMIFK 158 (308)
T ss_dssp HHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS--SSSCTHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc--cccCccHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 556777777666311335678999999999999999999999999874 454 33 89999999999999999999999
Q ss_pred HHHhcCCCCChHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccc
Q 021583 148 KIFLDHLEGTPRIFFDKMISIYY-NRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWE 226 (310)
Q Consensus 148 ~m~~~~~~~~~~~~y~~li~~~~-~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~ 226 (310)
+..+..- .+...|........ ..|+.++|.++|+...+.. +-+...|..++..+.+.|+.++|..+|++...
T Consensus 159 ~a~~~~p--~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~---- 231 (308)
T 2ond_A 159 KAREDAR--TRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKY-GDIPEYVLAYIDYLSHLNEDNNTRVLFERVLT---- 231 (308)
T ss_dssp HHHTSTT--CCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHH----
T ss_pred HHHhcCC--CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHh----
Confidence 9988643 23334544333322 3699999999999987642 12578899999999999999999999876210
Q ss_pred hheeccCcccC--ChhhhhHhhhc--cCCChhhHHhhhchhhc
Q 021583 227 YRYIKGKRVRI--PAKPKYELDSA--TEGKTNEVETTKNPNES 265 (310)
Q Consensus 227 ~~~~~~~~~~~--~~~~~~~li~~--~~g~~~~a~~~~~~m~~ 265 (310)
...+.+ ....|..++.. ..|+.++|..++++...
T Consensus 232 -----~~~l~p~~~~~l~~~~~~~~~~~g~~~~a~~~~~~a~~ 269 (308)
T 2ond_A 232 -----SGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFT 269 (308)
T ss_dssp -----SSSSCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred -----ccCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 001122 34567666666 78999999999887754
No 56
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.60 E-value=2.2e-06 Score=79.47 Aligned_cols=180 Identities=10% Similarity=-0.006 Sum_probs=139.8
Q ss_pred HHHHHHHHHHHHHcCCCCC-------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHH
Q 021583 69 KEEVYGALDSFIAWELEFP-------LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDE 141 (310)
Q Consensus 69 ~~~~~~~~~~m~~~~~~p~-------~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~ 141 (310)
.+++...++++.+.. +.+ ..++..+-..+...|++++|.+.|+...+. .|+..++..+...|...|++++
T Consensus 218 ~~~A~~~~~~~l~~~-p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~ 294 (537)
T 3fp2_A 218 LTKSTDMYHSLLSAN-TVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESINL--HPTPNSYIFLALTLADKENSQE 294 (537)
T ss_dssp HHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CCCHHHHHHHHHHTCCSSCCHH
T ss_pred HHHHHHHHHHHHHHC-CCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhc--CCCchHHHHHHHHHHHhcCHHH
Confidence 445677777776554 222 235777778889999999999999998876 4668889999999999999999
Q ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhCC
Q 021583 142 AEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYP 221 (310)
Q Consensus 142 A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~~ 221 (310)
|.+.|++..+..- .+..+|..+...|...|++++|.+.++...+.. +-+...|..+..+|...|++++|...+++..
T Consensus 295 A~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~ 371 (537)
T 3fp2_A 295 FFKFFQKAVDLNP--EYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLN-PENVYPYIQLACLLYKQGKFTESEAFFNETK 371 (537)
T ss_dssp HHHHHHHHHHHCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCC--CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 9999999998753 445689999999999999999999999998753 1246889999999999999999999987621
Q ss_pred CCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhc
Q 021583 222 PPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNES 265 (310)
Q Consensus 222 p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~ 265 (310)
.. .+.+...+..+... ..|++++|.+.++....
T Consensus 372 ~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 406 (537)
T 3fp2_A 372 LK-----------FPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKR 406 (537)
T ss_dssp HH-----------CTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred Hh-----------CCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 00 01223444445444 89999999999987654
No 57
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.57 E-value=9.9e-06 Score=66.54 Aligned_cols=130 Identities=12% Similarity=0.046 Sum_probs=111.7
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHH
Q 021583 86 FPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKM 165 (310)
Q Consensus 86 p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~l 165 (310)
.|...+...-..+.+.|++++|.+.|+...+..-.++...+..+-..+...|++++|.+.|++..+.. |.+...|..+
T Consensus 5 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~l 82 (228)
T 4i17_A 5 TDPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKN--YNLANAYIGK 82 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT--CSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhC--cchHHHHHHH
Confidence 35678888889999999999999999998877544778888889999999999999999999999764 3455689999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHCCCCCC-H-------HHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 166 ISIYYNRGMHEKMFEIFADMEELGVRPN-V-------SIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 166 i~~~~~~g~~~~a~~l~~~m~~~g~~p~-~-------~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
-..|...|++++|.+.++...+. .|+ . ..|..+-..+...|++++|...|++
T Consensus 83 ~~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ 142 (228)
T 4i17_A 83 SAAYRDMKNNQEYIATLTEGIKA--VPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKH 142 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH--STTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHcccHHHHHHHHHHHHHH--CCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHH
Confidence 99999999999999999998874 343 4 4588888889999999999999987
No 58
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.56 E-value=5.3e-06 Score=69.72 Aligned_cols=148 Identities=11% Similarity=0.043 Sum_probs=114.2
Q ss_pred CcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHhcCCHHHHHH
Q 021583 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGR--TMGTYFLLLNALAEDGRLDEAEE 144 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p--~~~ty~~ll~~~~~~g~~~~A~~ 144 (310)
+..+.|...+++..+.. +-+...+..+...|.+.|++++|.+.|+...+.+-.+ ...+|..+...|...|++++|.+
T Consensus 17 ~~~~~A~~~~~~~l~~~-p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~ 95 (272)
T 3u4t_A 17 NNYAEAIEVFNKLEAKK-YNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAIQ 95 (272)
T ss_dssp TCHHHHHHHHHHHHHTT-CCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcccHHHHHH
Confidence 34455577777777654 2345578888889999999999999999988743222 24558889999999999999999
Q ss_pred HHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 145 LWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP-NVSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 145 ~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
.|++..+..- .+..+|..+-..|...|++++|.+.++...+. .| +...|..+...+...+++++|.+.|++
T Consensus 96 ~~~~a~~~~~--~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 167 (272)
T 3u4t_A 96 QYQAAVDRDT--TRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRP--TTTDPKVFYELGQAYYYNKEYVKADSSFVK 167 (272)
T ss_dssp HHHHHHHHST--TCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCS--SCCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHhcCc--ccHHHHHHHHHHHHHccCHHHHHHHHHHHhhc--CCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988753 34468999999999999999999999987765 44 467777777344445699999999876
No 59
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.54 E-value=7.4e-06 Score=68.82 Aligned_cols=163 Identities=13% Similarity=0.065 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCCh--HHHHHHHH
Q 021583 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP--RIFFDKMI 166 (310)
Q Consensus 89 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~--~~~y~~li 166 (310)
..+......+.+.|++++|...|+...+.. +-+...+..+...|...|++++|.+.|++..+..-. ++ ..+|..+-
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~-p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~lg 81 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEAKK-YNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNA-TKAKSADFEYYG 81 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHHTT-CCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCT-TTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCc-hhHHHHHHHHHH
Confidence 344556778889999999999999988763 234558888999999999999999999999984321 22 23589999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccchheeccCcccCChhhhhHhh
Q 021583 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELD 246 (310)
Q Consensus 167 ~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li 246 (310)
..|...|++++|.+.++...+.. +-+...|..+...|...|++++|...|++.... .+.+...+..+.
T Consensus 82 ~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-----------~~~~~~~~~~l~ 149 (272)
T 3u4t_A 82 KILMKKGQDSLAIQQYQAAVDRD-TTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRP-----------TTTDPKVFYELG 149 (272)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHS-TTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCS-----------SCCCHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHhcC-cccHHHHHHHHHHHHHccCHHHHHHHHHHHhhc-----------CCCcHHHHHHHH
Confidence 99999999999999999988743 124588999999999999999999999874211 122334444444
Q ss_pred -hc-cCCChhhHHhhhchhhc
Q 021583 247 -SA-TEGKTNEVETTKNPNES 265 (310)
Q Consensus 247 -~~-~~g~~~~a~~~~~~m~~ 265 (310)
.. ..+++++|.+.++....
T Consensus 150 ~~~~~~~~~~~A~~~~~~a~~ 170 (272)
T 3u4t_A 150 QAYYYNKEYVKADSSFVKVLE 170 (272)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 33 55688888888876654
No 60
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.53 E-value=9.8e-06 Score=68.01 Aligned_cols=148 Identities=13% Similarity=-0.001 Sum_probs=106.1
Q ss_pred CcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHH
Q 021583 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELW 146 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~ 146 (310)
+..+.|...+++..+.+ +.+..+|..+...|.+.|++++|.+.|+...+.. +.+..++..+...|.+.|++++|.+.|
T Consensus 57 ~~~~~A~~~~~~al~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~la~~~~~~g~~~~A~~~~ 134 (275)
T 1xnf_A 57 GLRALARNDFSQALAIR-PDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELD-PTYNYAHLNRGIALYYGGRDKLAQDDL 134 (275)
T ss_dssp TCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCTHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcC-CCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC-ccccHHHHHHHHHHHHhccHHHHHHHH
Confidence 33444477777777654 4468889999999999999999999999988653 335788899999999999999999999
Q ss_pred HHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCC-------------------------------CCCC--
Q 021583 147 TKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG-------------------------------VRPN-- 193 (310)
Q Consensus 147 ~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g-------------------------------~~p~-- 193 (310)
+++.+..- +...+...+..+...|++++|...+....... ..|+
T Consensus 135 ~~a~~~~~---~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 211 (275)
T 1xnf_A 135 LAFYQDDP---NDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLA 211 (275)
T ss_dssp HHHHHHCT---TCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHH
T ss_pred HHHHHhCC---CChHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhccccccc
Confidence 99988643 22233444445566788888888886554321 0111
Q ss_pred ---HHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 194 ---VSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 194 ---~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
...|..+..+|...|++++|...|++
T Consensus 212 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 240 (275)
T 1xnf_A 212 EHLSETNFYLGKYYLSLGDLDSATALFKL 240 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 35666777777777777777777765
No 61
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.50 E-value=3.8e-06 Score=72.31 Aligned_cols=133 Identities=12% Similarity=-0.017 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHC----CCCC-CHHHHHHHHHHHHhc-CCHHHHHHHHHHHHhcCCC--CCh-
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSK----GQGR-TMGTYFLLLNALAED-GRLDEAEELWTKIFLDHLE--GTP- 158 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----g~~p-~~~ty~~ll~~~~~~-g~~~~A~~~~~~m~~~~~~--~~~- 158 (310)
..+|+.+-..|.+.|++++|...|+...+. |-.. -..+|+.+-..|... |++++|+..|++..+..-. ...
T Consensus 77 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~ 156 (292)
T 1qqe_A 77 GNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVAL 156 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHH
Confidence 468999999999999999999999986543 2111 146788899999996 9999999999987764210 011
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCH------HHHHHHHHHHHhcCCHHHHHHHHHhC
Q 021583 159 -RIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNV------SIVSMMGNAFQKLGMLDKYEKLKKKY 220 (310)
Q Consensus 159 -~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~------~ty~~li~~~~~~g~~~~a~~l~~~~ 220 (310)
..+|+.+-..|.+.|++++|...|+...+....... ..|..+..++...|++++|...|++.
T Consensus 157 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 225 (292)
T 1qqe_A 157 SNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEG 225 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 237899999999999999999999998875432221 26788888999999999999999873
No 62
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.49 E-value=1.5e-05 Score=65.50 Aligned_cols=137 Identities=13% Similarity=0.068 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 021583 69 KEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTK 148 (310)
Q Consensus 69 ~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~ 148 (310)
.++|...+++..+..-+++...+..+-.++.+.|++++|.+.|+...+.. +-+..+|..+-..|...|++++|.+.|++
T Consensus 23 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 101 (228)
T 4i17_A 23 YAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKN-YNLANAYIGKSAAYRDMKNNQEYIATLTE 101 (228)
T ss_dssp HHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT-CSHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhC-cchHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 34447788887777644777887779999999999999999999988663 23567889999999999999999999999
Q ss_pred HHhcCCCCChH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCC---HHHHHHHHHHHHhcCCH
Q 021583 149 IFLDHLEGTPR-------IFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN---VSIVSMMGNAFQKLGML 210 (310)
Q Consensus 149 m~~~~~~~~~~-------~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~---~~ty~~li~~~~~~g~~ 210 (310)
..+..- .+. ..|..+-..+...|++++|++.|+...+. .|+ ...|..+..+|...|+.
T Consensus 102 al~~~p--~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 102 GIKAVP--GNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDV--TSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp HHHHST--TCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS--SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCC--CcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhc--CCCcccHHHHHHHHHHHHHHHHH
Confidence 988753 333 35788888889999999999999998764 576 47788888888887777
No 63
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.48 E-value=8.6e-06 Score=65.96 Aligned_cols=125 Identities=13% Similarity=0.072 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHH
Q 021583 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168 (310)
Q Consensus 89 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~ 168 (310)
..+..+-..+.+.|++++|.+.|+.. +.|+...|..+...|.+.|++++|.+.|++..+..- .+...|..+-..
T Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~a----~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~--~~~~~~~~lg~~ 80 (213)
T 1hh8_A 7 ISLWNEGVLAADKKDWKGALDAFSAV----QDPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDK--HLAVAYFQRGML 80 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTS----SSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHH----cCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc--cchHHHHHHHHH
Confidence 34556677888999999999999876 467889999999999999999999999999988753 445689999999
Q ss_pred HHHcCCHHHHHHHHHHHHHCC--------------CCCC-HHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 169 YYNRGMHEKMFEIFADMEELG--------------VRPN-VSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 169 ~~~~g~~~~a~~l~~~m~~~g--------------~~p~-~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
|...|++++|.+.|+...+.. ..|+ ...|..+..+|...|++++|...|++
T Consensus 81 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 146 (213)
T 1hh8_A 81 YYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLAL 146 (213)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 999999999999999988743 2222 37888999999999999999999876
No 64
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=98.48 E-value=3.2e-05 Score=69.38 Aligned_cols=177 Identities=7% Similarity=-0.024 Sum_probs=138.8
Q ss_pred CcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHH
Q 021583 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKD-WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEEL 145 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~-~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~ 145 (310)
+..++|...+++..+.+ +-+...|+.+-..+.+.|+ +++|+..|+...... .-+...|..+-..|.+.|++++|+..
T Consensus 111 g~~~~Al~~~~~al~l~-P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~-P~~~~a~~~~g~~~~~~g~~~eAl~~ 188 (382)
T 2h6f_A 111 ERSERAFKLTRDAIELN-AANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQ-PKNYQVWHHRRVLVEWLRDPSQELEF 188 (382)
T ss_dssp CCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCCTTHHHH
T ss_pred CChHHHHHHHHHHHHhC-ccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHccCHHHHHHH
Confidence 45566788888887765 4467889999999999997 999999999988763 34678999999999999999999999
Q ss_pred HHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHh-cCCHHHH-----HHHHH
Q 021583 146 WTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP-NVSIVSMMGNAFQK-LGMLDKY-----EKLKK 218 (310)
Q Consensus 146 ~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~li~~~~~-~g~~~~a-----~~l~~ 218 (310)
|++..+..- .+...|..+-..+.+.|++++|++.++.+.+.. | +...|+.+..+|.. .|..++| +..|+
T Consensus 189 ~~kal~ldP--~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~--P~~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~ 264 (382)
T 2h6f_A 189 IADILNQDA--KNYHAWQHRQWVIQEFKLWDNELQYVDQLLKED--VRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTL 264 (382)
T ss_dssp HHHHHHHCT--TCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHH
T ss_pred HHHHHHhCc--cCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHhcCcchHHHHHHHHHHHH
Confidence 999998753 556789999999999999999999999998854 4 57899999999999 6665777 35555
Q ss_pred h---CCCCccchheeccCcccCChhhhhHhhhc--cCC--ChhhHHhhhchh
Q 021583 219 K---YPPPKWEYRYIKGKRVRIPAKPKYELDSA--TEG--KTNEVETTKNPN 263 (310)
Q Consensus 219 ~---~~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g--~~~~a~~~~~~m 263 (310)
+ +.|+ +...|..+-.. ..| +.++|.+.+..+
T Consensus 265 ~Al~l~P~--------------~~~a~~~l~~ll~~~g~~~~~~a~~~~~~~ 302 (382)
T 2h6f_A 265 EMIKLVPH--------------NESAWNYLKGILQDRGLSKYPNLLNQLLDL 302 (382)
T ss_dssp HHHHHSTT--------------CHHHHHHHHHHHTTTCGGGCHHHHHHHHHH
T ss_pred HHHHHCCC--------------CHHHHHHHHHHHHccCccchHHHHHHHHHh
Confidence 4 2332 23333333322 344 688888888776
No 65
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.48 E-value=1.8e-05 Score=57.43 Aligned_cols=116 Identities=21% Similarity=0.205 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHH
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~ 167 (310)
...+..+...+.+.|++++|.+.|+.+.+.. ..+..++..+...+.+.|++++|..+|+++.+..- .+..+|..+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~--~~~~~~~~la~ 85 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP--NNAEAWYNLGN 85 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-cCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCC--ccHHHHHHHHH
Confidence 5678888889999999999999999988653 34678888999999999999999999999988753 44568899999
Q ss_pred HHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhc
Q 021583 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207 (310)
Q Consensus 168 ~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~ 207 (310)
.|...|++++|.+.++++.+.. +-+...+..+...+...
T Consensus 86 ~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~ 124 (125)
T 1na0_A 86 AYYKQGDYDEAIEYYQKALELD-PNNAEAKQNLGNAKQKQ 124 (125)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHhc
Confidence 9999999999999999987643 12445555555555443
No 66
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.46 E-value=1.2e-05 Score=69.71 Aligned_cols=187 Identities=7% Similarity=0.005 Sum_probs=127.8
Q ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 021583 72 VYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQ-GRTMGTYFLLLNALAEDGRLDEAEELWTKIF 150 (310)
Q Consensus 72 ~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~-~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~ 150 (310)
+...|+++.+.+ .++..++..+..++...|++++|+++++.-...|- .-+...+..++..+.+.|+.+.|.+.+++|.
T Consensus 85 a~~~l~~l~~~~-~~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~ 163 (310)
T 3mv2_B 85 NIEELENLLKDK-QNSPYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYT 163 (310)
T ss_dssp CCHHHHHTTTTS-CCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC-CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 345666666555 56677777888999999999999999999766653 2367888899999999999999999999998
Q ss_pred hcCCCCC-----hHHHHHHHHHHHH--HcC--CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhCC
Q 021583 151 LDHLEGT-----PRIFFDKMISIYY--NRG--MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYP 221 (310)
Q Consensus 151 ~~~~~~~-----~~~~y~~li~~~~--~~g--~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~~ 221 (310)
+.. + +..+...|..+++ ..| +.++|..+|+++.+. .|+..+-..++.++.+.|++++|++.++.+.
T Consensus 164 ~~~---~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~--~p~~~~~~lLln~~~~~g~~~eAe~~L~~l~ 238 (310)
T 3mv2_B 164 NAI---EDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQT--FPTWKTQLGLLNLHLQQRNIAEAQGIVELLL 238 (310)
T ss_dssp HHS---CHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTT--SCSHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hcC---ccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh--CCCcccHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 863 3 2455666666633 334 899999999998764 3664555666669999999999999986532
Q ss_pred CCccchheeccCcccCChhhhhHhh--hccCCChhhHHhhhchhhcCC
Q 021583 222 PPKWEYRYIKGKRVRIPAKPKYELD--SATEGKTNEVETTKNPNESSE 267 (310)
Q Consensus 222 p~~~~~~~~~~~~~~~~~~~~~~li--~~~~g~~~~a~~~~~~m~~~~ 267 (310)
.....+... ...-+-+..+.-.+| ....|+ +|.+++..+....
T Consensus 239 ~~~p~~~~k-~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~ 283 (310)
T 3mv2_B 239 SDYYSVEQK-ENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLD 283 (310)
T ss_dssp SHHHHTTTC-HHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTT
T ss_pred Hhccccccc-ccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhC
Confidence 110000000 000012344442232 225565 7888888776544
No 67
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.42 E-value=1.5e-05 Score=75.18 Aligned_cols=144 Identities=11% Similarity=-0.095 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 021583 71 EVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIF 150 (310)
Q Consensus 71 ~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~ 150 (310)
+|...+++..+.. +-+...+..+-..|.+.|++++|.+.|++..+.. .-+...+..+-..|...|++++|.+.|++..
T Consensus 7 ~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 84 (568)
T 2vsy_A 7 RELLQLRAAVRHR-PQDFVAWLMLADAELGMGDTTAGEMAVQRGLALH-PGHPEAVARLGRVRWTQQRHAEAAVLLQQAS 84 (568)
T ss_dssp ---------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 3455555554433 3357889999999999999999999999988653 3457889999999999999999999999998
Q ss_pred hcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhc---CCHHHHHHHHHh
Q 021583 151 LDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL---GMLDKYEKLKKK 219 (310)
Q Consensus 151 ~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~---g~~~~a~~l~~~ 219 (310)
+..- .+...|..+-..|.+.|++++|.+.+++..+.. .-+...+..+..+|... |+.++|.+.+++
T Consensus 85 ~~~p--~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~ 153 (568)
T 2vsy_A 85 DAAP--EHPGIALWLGHALEDAGQAEAAAAAYTRAHQLL-PEEPYITAQLLNWRRRLCDWRALDVLSAQVRA 153 (568)
T ss_dssp HHCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHH
T ss_pred hcCC--CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhhccccHHHHHHHHHH
Confidence 8753 445689999999999999999999999988753 22578889999999999 999999999876
No 68
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.42 E-value=1.5e-05 Score=73.71 Aligned_cols=164 Identities=7% Similarity=-0.002 Sum_probs=135.2
Q ss_pred CCCHHHHHHHHHHHHhcCCH-HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHH
Q 021583 85 EFPLITVKKALKTLENEKDW-KRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD 163 (310)
Q Consensus 85 ~p~~~~~~~li~~~~~~~~~-~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~ 163 (310)
+.+...+..+-..|...|++ ++|.+.|+...+.. .-+..+|..+-..|.+.|++++|.+.|++..+.. ++...|.
T Consensus 99 ~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~---p~~~~~~ 174 (474)
T 4abn_A 99 QVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLE-PELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHC---KNKVSLQ 174 (474)
T ss_dssp CCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTC---CCHHHHH
T ss_pred chhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC---CCHHHHH
Confidence 34678899999999999999 99999999988663 3458899999999999999999999999999875 3347899
Q ss_pred HHHHHHHHc---------CCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhc--------CCHHHHHHHHHhC---CC
Q 021583 164 KMISIYYNR---------GMHEKMFEIFADMEELGVRP-NVSIVSMMGNAFQKL--------GMLDKYEKLKKKY---PP 222 (310)
Q Consensus 164 ~li~~~~~~---------g~~~~a~~l~~~m~~~g~~p-~~~ty~~li~~~~~~--------g~~~~a~~l~~~~---~p 222 (310)
.+-..|... |++++|++.+++..+.. | +...|..+..+|... |++++|...|++. .|
T Consensus 175 ~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p 252 (474)
T 4abn_A 175 NLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMD--VLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDR 252 (474)
T ss_dssp HHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCC
Confidence 999999999 99999999999988753 4 578999999999999 9999999998762 22
Q ss_pred CccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhc
Q 021583 223 PKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNES 265 (310)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~ 265 (310)
. ...+...+..+-.. ..|++++|.+.++....
T Consensus 253 ~-----------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 286 (474)
T 4abn_A 253 K-----------ASSNPDLHLNRATLHKYEESYGEALEGFSQAAA 286 (474)
T ss_dssp G-----------GGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred C-----------cccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 1 01345555555555 89999999999987754
No 69
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.39 E-value=3e-05 Score=72.36 Aligned_cols=179 Identities=10% Similarity=0.039 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCC--HHHHHHHHHHHHhcCCHHHHHHHHHH
Q 021583 71 EVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRT--MGTYFLLLNALAEDGRLDEAEELWTK 148 (310)
Q Consensus 71 ~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~--~~ty~~ll~~~~~~g~~~~A~~~~~~ 148 (310)
.|..++++..+.-.+-+...|..+...+.+.|++++|..+|+...+. .|+ ...|..++..+.+.|++++|.++|++
T Consensus 304 ~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 381 (530)
T 2ooe_A 304 EAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAI--EDIDPTLVYIQYMKFARRAEGIKSGRMIFKK 381 (530)
T ss_dssp HHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS--SSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCc--cccCchHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 45555555443212335788999999999999999999999999875 454 35899999999999999999999999
Q ss_pred HHhcCCCCChHHHHH--HHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHhCCCCcc
Q 021583 149 IFLDHLEGTPRIFFD--KMISIYYNRGMHEKMFEIFADMEELGVRP-NVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKW 225 (310)
Q Consensus 149 m~~~~~~~~~~~~y~--~li~~~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~ 225 (310)
..+..- .+...|- +++ .+...|+.++|.++|+...+. .| +...|..++..+.+.|+.++|..+|++...
T Consensus 382 Al~~~~--~~~~~~~~~a~~-~~~~~~~~~~A~~~~e~al~~--~p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~--- 453 (530)
T 2ooe_A 382 AREDAR--TRHHVYVTAALM-EYYCSKDKSVAFKIFELGLKK--YGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLT--- 453 (530)
T ss_dssp HHTCTT--CCTHHHHHHHHH-HHHHTCCHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHH---
T ss_pred HHhccC--CchHHHHHHHHH-HHHHcCChhHHHHHHHHHHHH--CCCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHh---
Confidence 887632 2112222 222 234689999999999988764 35 578899999999999999999999877210
Q ss_pred chheeccCccc--CChhhhhHhhhc--cCCChhhHHhhhchhhc
Q 021583 226 EYRYIKGKRVR--IPAKPKYELDSA--TEGKTNEVETTKNPNES 265 (310)
Q Consensus 226 ~~~~~~~~~~~--~~~~~~~~li~~--~~g~~~~a~~~~~~m~~ 265 (310)
..... ....+|...+.. ..|+.+.+..+..++..
T Consensus 454 ------~~~~~~~~~~~lw~~~~~~e~~~G~~~~~~~~~~r~~~ 491 (530)
T 2ooe_A 454 ------SGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFT 491 (530)
T ss_dssp ------SCCSCGGGCHHHHHHHHHHHHHSSCHHHHHHHHHHHHH
T ss_pred ------ccCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 00011 123466655555 77999988888776643
No 70
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.37 E-value=2.1e-05 Score=60.56 Aligned_cols=128 Identities=9% Similarity=-0.086 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHH
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~ 167 (310)
...+..+-..+...|++++|...|+...+.. ..+..++..+...+...|++++|.+.|++..+..- .+...|..+-.
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~--~~~~~~~~~a~ 89 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELN-PSNAIYYGNRSLAYLRTECYGYALGDATRAIELDK--KYIKGYYRRAA 89 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc--ccHHHHHHHHH
Confidence 3567788888999999999999999987653 34688899999999999999999999999988753 44568999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHCCCCCCHHHH--HHHHHHHHhcCCHHHHHHHHHh
Q 021583 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIV--SMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 168 ~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty--~~li~~~~~~g~~~~a~~l~~~ 219 (310)
.|...|++++|.+.++...+..- -+...+ -.+...+...|++++|...++.
T Consensus 90 ~~~~~~~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 142 (166)
T 1a17_A 90 SNMALGKFRAALRDYETVVKVKP-HDKDAKMKYQECNKIVKQKAFERAIAGDEH 142 (166)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 99999999999999999887531 244444 3444447888999999998865
No 71
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.35 E-value=3.2e-05 Score=56.60 Aligned_cols=119 Identities=11% Similarity=-0.019 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHH
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~ 167 (310)
...+..+...+...|++++|.+.|+...... ..+...+..+...+...|++++|.+.+++..+..- .+...|..+..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~--~~~~~~~~~~~ 88 (131)
T 2vyi_A 12 AERLKTEGNEQMKVENFEAAVHFYGKAIELN-PANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDP--AYSKAYGRMGL 88 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHccCHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCc--cCHHHHHHHHH
Confidence 5677888889999999999999999988653 34678899999999999999999999999988743 44568999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCH
Q 021583 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGML 210 (310)
Q Consensus 168 ~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~ 210 (310)
.|...|++++|.+.++...+.. +-+...+..+..++.+.|+.
T Consensus 89 ~~~~~~~~~~A~~~~~~~~~~~-p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 89 ALSSLNKHVEAVAYYKKALELD-PDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHTTC
T ss_pred HHHHhCCHHHHHHHHHHHHhcC-ccchHHHHHHHHHHHHHhcC
Confidence 9999999999999999987753 22567788888888877764
No 72
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.34 E-value=9.1e-05 Score=69.06 Aligned_cols=180 Identities=9% Similarity=-0.041 Sum_probs=131.1
Q ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHHHHHh-------cCCHH-------HHHHHHHHHHHCCCCCCHHHHHHHHHHHHhc
Q 021583 71 EVYGALDSFIAWELEFPLITVKKALKTLEN-------EKDWK-------RIIQVTKWMLSKGQGRTMGTYFLLLNALAED 136 (310)
Q Consensus 71 ~~~~~~~~m~~~~~~p~~~~~~~li~~~~~-------~~~~~-------~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~ 136 (310)
++..++++..... +-+...|..+...+.+ .|+++ +|..+|+...+.-.+-+...|..+...+.+.
T Consensus 256 ~a~~~y~~al~~~-p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~ 334 (530)
T 2ooe_A 256 RVMFAYEQCLLVL-GHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESR 334 (530)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhc
Confidence 3445555555442 3456778777777775 68877 8999999877532334588999999999999
Q ss_pred CCHHHHHHHHHHHHhcCCCCCh-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCC-HHHHHHHHH-HHHhcCCHHHH
Q 021583 137 GRLDEAEELWTKIFLDHLEGTP-RIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN-VSIVSMMGN-AFQKLGMLDKY 213 (310)
Q Consensus 137 g~~~~A~~~~~~m~~~~~~~~~-~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~-~~ty~~li~-~~~~~g~~~~a 213 (310)
|++++|.++|++..+..- .+ ...|..+...+.+.|+.++|.++|+...+. .|+ ...|..... .+...|+.++|
T Consensus 335 g~~~~A~~~~~~al~~~p--~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~--~~~~~~~~~~~a~~~~~~~~~~~~A 410 (530)
T 2ooe_A 335 MKYEKVHSIYNRLLAIED--IDPTLVYIQYMKFARRAEGIKSGRMIFKKARED--ARTRHHVYVTAALMEYYCSKDKSVA 410 (530)
T ss_dssp TCHHHHHHHHHHHHHSSS--SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--TTCCTHHHHHHHHHHHHHTCCHHHH
T ss_pred CCHHHHHHHHHHHhCccc--cCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--cCCchHHHHHHHHHHHHHcCChhHH
Confidence 999999999999998632 33 348999999999999999999999998764 232 333332222 23468999999
Q ss_pred HHHHHhCCCCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhcC
Q 021583 214 EKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNESS 266 (310)
Q Consensus 214 ~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~~ 266 (310)
..+|++.. .. .+.+...|..+++. ..|+.++|..++++....
T Consensus 411 ~~~~e~al---------~~--~p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~ 454 (530)
T 2ooe_A 411 FKIFELGL---------KK--YGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTS 454 (530)
T ss_dssp HHHHHHHH---------HH--HTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHS
T ss_pred HHHHHHHH---------HH--CCCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhc
Confidence 99987621 00 02345667777766 889999999999888765
No 73
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.27 E-value=3.5e-05 Score=56.81 Aligned_cols=119 Identities=7% Similarity=-0.075 Sum_probs=95.9
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHH
Q 021583 85 EFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDK 164 (310)
Q Consensus 85 ~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~ 164 (310)
+.+...+..+...+.+.|++++|.+.|+...+.. ..+...+..+...|...|++++|.+.|++..+..- .+...|..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~--~~~~~~~~ 89 (133)
T 2lni_A 13 PDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRN-PKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEP--TFIKGYTR 89 (133)
T ss_dssp SCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTC-TTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCT--TCHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC--CchHHHHH
Confidence 3456788899999999999999999999987652 34678889999999999999999999999888643 44568899
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhcC
Q 021583 165 MISIYYNRGMHEKMFEIFADMEELGVRP-NVSIVSMMGNAFQKLG 208 (310)
Q Consensus 165 li~~~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~li~~~~~~g 208 (310)
+...|.+.|++++|.+.++...+. .| +...+..+..++...|
T Consensus 90 la~~~~~~~~~~~A~~~~~~~~~~--~p~~~~~~~~l~~~~~~~~ 132 (133)
T 2lni_A 90 KAAALEAMKDYTKAMDVYQKALDL--DSSCKEAADGYQRCMMAQY 132 (133)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH--CGGGTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHh--CCCchHHHHHHHHHHHHhc
Confidence 999999999999999999998764 24 3456666666666554
No 74
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.25 E-value=4.6e-05 Score=65.38 Aligned_cols=161 Identities=9% Similarity=0.036 Sum_probs=116.9
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHH
Q 021583 85 EFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDK 164 (310)
Q Consensus 85 ~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~ 164 (310)
+.+...+..+-..+.+.|++++|...|+...... +-+...+..+...|.+.|++++|...+++..... +.+...+..
T Consensus 114 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~--p~~~~~~~~ 190 (287)
T 3qou_A 114 PREEELXAQQAMQLMQESNYTDALPLLXDAWQLS-NQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQD--QDTRYQGLV 190 (287)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-TSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGG--CSHHHHHHH
T ss_pred CCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHhC-CcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhh--cchHHHHHH
Confidence 4455667788888889999999999999987652 3356788889999999999999999999887653 223333444
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHhC---CCCccchheeccCcccCChh
Q 021583 165 MISIYYNRGMHEKMFEIFADMEELGVRP-NVSIVSMMGNAFQKLGMLDKYEKLKKKY---PPPKWEYRYIKGKRVRIPAK 240 (310)
Q Consensus 165 li~~~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~li~~~~~~g~~~~a~~l~~~~---~p~~~~~~~~~~~~~~~~~~ 240 (310)
....+...++.++|.+.+++..+. .| +...+..+...|...|++++|...|++. .|+ ..+..
T Consensus 191 ~~~~l~~~~~~~~a~~~l~~al~~--~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~------------~~~~~ 256 (287)
T 3qou_A 191 AQIELLXQAADTPEIQQLQQQVAE--NPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLT------------AADGQ 256 (287)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------------GGGGH
T ss_pred HHHHHHhhcccCccHHHHHHHHhc--CCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccc------------cccch
Confidence 444467788888888888887764 35 5788889999999999999999998763 233 12244
Q ss_pred hhhHhhhc--cCCChhhHHhhhch
Q 021583 241 PKYELDSA--TEGKTNEVETTKNP 262 (310)
Q Consensus 241 ~~~~li~~--~~g~~~~a~~~~~~ 262 (310)
.+..|... ..|+.++|...+++
T Consensus 257 a~~~l~~~~~~~g~~~~a~~~~r~ 280 (287)
T 3qou_A 257 TRXTFQEILAALGTGDALASXYRR 280 (287)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCcHHHHHHH
Confidence 55555555 66777777665544
No 75
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.24 E-value=5.2e-05 Score=63.62 Aligned_cols=150 Identities=7% Similarity=-0.024 Sum_probs=112.0
Q ss_pred CcHHHHHHHHHHHHHcCCCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCC--CCCCHHHHHHHHHHHHh------
Q 021583 67 NVKEEVYGALDSFIAWELEFP---LITVKKALKTLENEKDWKRIIQVTKWMLSKG--QGRTMGTYFLLLNALAE------ 135 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~---~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g--~~p~~~ty~~ll~~~~~------ 135 (310)
+..+.|...|++..+.. +-+ ...+..+-.+|.+.|++++|...|+...+.. ......++..+-..+..
T Consensus 29 g~~~~A~~~~~~~l~~~-p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~ 107 (261)
T 3qky_A 29 GKYDRAIEYFKAVFTYG-RTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYE 107 (261)
T ss_dssp TCHHHHHHHHHHHGGGC-SCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTT
T ss_pred CCHHHHHHHHHHHHHhC-CCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhccccc
Confidence 33444578888877654 222 6778888999999999999999999988652 12225667777888888
Q ss_pred --cCCHHHHHHHHHHHHhcCCCCChHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHHCCCC-C-CH
Q 021583 136 --DGRLDEAEELWTKIFLDHLEGTPRIFF-----------------DKMISIYYNRGMHEKMFEIFADMEELGVR-P-NV 194 (310)
Q Consensus 136 --~g~~~~A~~~~~~m~~~~~~~~~~~~y-----------------~~li~~~~~~g~~~~a~~l~~~m~~~g~~-p-~~ 194 (310)
.|++++|...|++..+..- .+...+ ..+-..|.+.|++++|...|+...+..-. + ..
T Consensus 108 ~~~~~~~~A~~~~~~~l~~~p--~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~ 185 (261)
T 3qky_A 108 LDQTDTRKAIEAFQLFIDRYP--NHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWAD 185 (261)
T ss_dssp SCCHHHHHHHHHHHHHHHHCT--TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHH
T ss_pred ccchhHHHHHHHHHHHHHHCc--CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHH
Confidence 9999999999999988743 222233 45677889999999999999998864311 1 23
Q ss_pred HHHHHHHHHHHhc----------CCHHHHHHHHHh
Q 021583 195 SIVSMMGNAFQKL----------GMLDKYEKLKKK 219 (310)
Q Consensus 195 ~ty~~li~~~~~~----------g~~~~a~~l~~~ 219 (310)
..+..+..+|... |++++|...|++
T Consensus 186 ~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~ 220 (261)
T 3qky_A 186 DALVGAMRAYIAYAEQSVRARQPERYRRAVELYER 220 (261)
T ss_dssp HHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccchhhcccchHHHHHHHHHH
Confidence 5677888888866 888999999876
No 76
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.23 E-value=2.3e-05 Score=69.75 Aligned_cols=153 Identities=9% Similarity=-0.025 Sum_probs=116.8
Q ss_pred CcHHHHHHHHHHHHHc----CCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCC-CC-----CHHHHHHHHHHHHh
Q 021583 67 NVKEEVYGALDSFIAW----ELEF-PLITVKKALKTLENEKDWKRIIQVTKWMLSKGQ-GR-----TMGTYFLLLNALAE 135 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~----~~~p-~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~-~p-----~~~ty~~ll~~~~~ 135 (310)
+..+.|...+++..+. +-.+ ...++..+-..|...|+++.|.+.++...+.-- .+ ...+++.+-..|..
T Consensus 117 g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~ 196 (383)
T 3ulq_A 117 REYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLD 196 (383)
T ss_dssp TCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHH
Confidence 5666677877777653 2111 246788999999999999999999998763311 12 24678888999999
Q ss_pred cCCHHHHHHHHHHHHhcCCCC--Ch--HHHHHHHHHHHHHcCCHHHHHHHHHHHHHC----CCCC-CHHHHHHHHHHHHh
Q 021583 136 DGRLDEAEELWTKIFLDHLEG--TP--RIFFDKMISIYYNRGMHEKMFEIFADMEEL----GVRP-NVSIVSMMGNAFQK 206 (310)
Q Consensus 136 ~g~~~~A~~~~~~m~~~~~~~--~~--~~~y~~li~~~~~~g~~~~a~~l~~~m~~~----g~~p-~~~ty~~li~~~~~ 206 (310)
.|++++|++.|++..+..-.. .+ ..+|+.+-..|...|++++|.+.+++..+. +-.| ...++..+..+|.+
T Consensus 197 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~ 276 (383)
T 3ulq_A 197 LKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYK 276 (383)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Confidence 999999999998877542110 11 137999999999999999999999987652 3324 35889999999999
Q ss_pred cCCHHHHHHHHHh
Q 021583 207 LGMLDKYEKLKKK 219 (310)
Q Consensus 207 ~g~~~~a~~l~~~ 219 (310)
.|++++|...+++
T Consensus 277 ~g~~~~A~~~~~~ 289 (383)
T 3ulq_A 277 LGKIDKAHEYHSK 289 (383)
T ss_dssp TTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 9999999999876
No 77
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.19 E-value=1.8e-05 Score=62.51 Aligned_cols=147 Identities=7% Similarity=0.013 Sum_probs=106.4
Q ss_pred cHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH-HHhcCCHHHHHHHH
Q 021583 68 VKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNA-LAEDGRLDEAEELW 146 (310)
Q Consensus 68 ~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~-~~~~g~~~~A~~~~ 146 (310)
..+.+...+++..+.. +-+...+..+-..+.+.|++++|...|+..... .|+...+..+... +...++..+|.+.|
T Consensus 21 ~~~~A~~~~~~al~~~-P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~--~p~~~~~~~~~~~~~~~~~~~~~a~~~~ 97 (176)
T 2r5s_A 21 EHAQALNVIQTLSDEL-QSRGDVKLAKADCLLETKQFELAQELLATIPLE--YQDNSYKSLIAKLELHQQAAESPELKRL 97 (176)
T ss_dssp CHHHHHHHHHTSCHHH-HTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGG--GCCHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred CHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhc--cCChHHHHHHHHHHHHhhcccchHHHHH
Confidence 3444466666544433 335778899999999999999999999987644 2344433332211 22333344678899
Q ss_pred HHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 147 TKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP-NVSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 147 ~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
++..+.. |.+...+..+-..|...|++++|...|++..+..-.+ +...+..+...|...|+.++|...|++
T Consensus 98 ~~al~~~--P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~ 169 (176)
T 2r5s_A 98 EQELAAN--PDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRR 169 (176)
T ss_dssp HHHHHHS--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred HHHHHhC--CCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHH
Confidence 9888764 3445689999999999999999999999988754322 356889999999999999999998865
No 78
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.19 E-value=5.8e-05 Score=54.67 Aligned_cols=94 Identities=24% Similarity=0.294 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q 021583 123 MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGN 202 (310)
Q Consensus 123 ~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~ 202 (310)
...+..+...+...|++++|.++|+++.+..- .+..+|..+...|.+.|++++|..+++.+.+.. +.+..++..+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~--~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~ 85 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDP--NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAWYNLGN 85 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCc--CcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-CccHHHHHHHHH
Confidence 56788889999999999999999999988753 445689999999999999999999999998753 336788999999
Q ss_pred HHHhcCCHHHHHHHHHh
Q 021583 203 AFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 203 ~~~~~g~~~~a~~l~~~ 219 (310)
.|...|++++|...|++
T Consensus 86 ~~~~~~~~~~A~~~~~~ 102 (125)
T 1na0_A 86 AYYKQGDYDEAIEYYQK 102 (125)
T ss_dssp HHHHTTCHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHH
Confidence 99999999999999876
No 79
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.17 E-value=4.7e-05 Score=73.62 Aligned_cols=147 Identities=9% Similarity=-0.058 Sum_probs=123.1
Q ss_pred CcHHHHHHHHHHHH--------HcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCC
Q 021583 67 NVKEEVYGALDSFI--------AWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGR 138 (310)
Q Consensus 67 ~~~~~~~~~~~~m~--------~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~ 138 (310)
+..++|...+++.. +.. +.+...+..+-..|.+.|++++|.+.|+...+.. .-+...|..+-..|...|+
T Consensus 405 ~~~~~A~~~~~~al~~~~~~~~~~~-p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~g~ 482 (681)
T 2pzi_A 405 SQPVQTLDSLRAARHGALDADGVDF-SESVELPLMEVRALLDLGDVAKATRKLDDLAERV-GWRWRLVWYRAVAELLTGD 482 (681)
T ss_dssp CCHHHHHHHHHHHHTC-------CC-TTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHhhhhccccccccc-ccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccC-cchHHHHHHHHHHHHHcCC
Confidence 55666778787776 222 3456788899999999999999999999988652 3467899999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhcCCHHHHHHHH
Q 021583 139 LDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP-NVSIVSMMGNAFQKLGMLDKYEKLK 217 (310)
Q Consensus 139 ~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~li~~~~~~g~~~~a~~l~ 217 (310)
+++|.+.|++..+..- .+...|..+-..|.+.|++++ ++.|++..+. .| +...|..+..+|.+.|++++|...|
T Consensus 483 ~~~A~~~~~~al~l~P--~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~--~P~~~~a~~~lg~~~~~~g~~~~A~~~~ 557 (681)
T 2pzi_A 483 YDSATKHFTEVLDTFP--GELAPKLALAATAELAGNTDE-HKFYQTVWST--NDGVISAAFGLARARSAEGDRVGAVRTL 557 (681)
T ss_dssp HHHHHHHHHHHHHHST--TCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCC--CChHHHHHHHHHHHHcCChHH-HHHHHHHHHh--CCchHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999988753 344689999999999999999 9999998874 35 5688999999999999999999999
Q ss_pred HhC
Q 021583 218 KKY 220 (310)
Q Consensus 218 ~~~ 220 (310)
++.
T Consensus 558 ~~a 560 (681)
T 2pzi_A 558 DEV 560 (681)
T ss_dssp HTS
T ss_pred Hhh
Confidence 874
No 80
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.16 E-value=6.9e-05 Score=60.87 Aligned_cols=119 Identities=12% Similarity=0.055 Sum_probs=90.9
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcC
Q 021583 94 ALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG 173 (310)
Q Consensus 94 li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g 173 (310)
+-..|.+.|++++|...|+...+.. +-+...+..+-..|...|++++|.+.|++..+.. |.+..+|..+-..|...|
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--P~~~~a~~~lg~~~~~~~ 136 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKA-PNNVDCLEACAEMQVCRGQEKDALRMYEKILQLE--ADNLAANIFLGNYYYLTA 136 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHh
Confidence 8888999999999999999988763 3468899999999999999999999999999875 345568888888887665
Q ss_pred CH--HHHHHHHHHHHHCCCCCCHH--HHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 174 MH--EKMFEIFADMEELGVRPNVS--IVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 174 ~~--~~a~~l~~~m~~~g~~p~~~--ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
+. +.+...+.... .|+.. .+..+-.++...|++++|...|++
T Consensus 137 ~~~~~~~~~~~~~~~----~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 182 (208)
T 3urz_A 137 EQEKKKLETDYKKLS----SPTKMQYARYRDGLSKLFTTRYEKARNSLQK 182 (208)
T ss_dssp HHHHHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh----CCCchhHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 43 34444444432 35443 344455566778999999999986
No 81
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.16 E-value=0.00033 Score=59.94 Aligned_cols=170 Identities=12% Similarity=0.041 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCC-----HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC---Ch-
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRT-----MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEG---TP- 158 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~-----~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~---~~- 158 (310)
...+...+..+...|++++|.+.++...+..-..+ ...+..+...+...|++++|.+.+++..+..... ..
T Consensus 75 ~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 154 (293)
T 2qfc_A 75 KKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQN 154 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHH
Confidence 34566778889999999999999998776532211 1223445566778899999999999887643211 11
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHC-CCCCC-----HHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccchheecc
Q 021583 159 RIFFDKMISIYYNRGMHEKMFEIFADMEEL-GVRPN-----VSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKG 232 (310)
Q Consensus 159 ~~~y~~li~~~~~~g~~~~a~~l~~~m~~~-g~~p~-----~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~~~~~~ 232 (310)
..+|+.+-..|...|++++|.+.++...+. ...|+ ..+|..+..+|...|++++|...+++...- . ..
T Consensus 155 ~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~---~---~~ 228 (293)
T 2qfc_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEI---S---CR 228 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---H---HH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHH---H---Hh
Confidence 238999999999999999999999987621 11222 268999999999999999999998762100 0 00
Q ss_pred Cccc-CChhhhhHhhhc--cCCChhhH-Hhhhchh
Q 021583 233 KRVR-IPAKPKYELDSA--TEGKTNEV-ETTKNPN 263 (310)
Q Consensus 233 ~~~~-~~~~~~~~li~~--~~g~~~~a-~~~~~~m 263 (310)
.+.. .-..++..+-.. ..|+.++| .++++.-
T Consensus 229 ~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~A 263 (293)
T 2qfc_A 229 INSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKA 263 (293)
T ss_dssp TTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 1111 113344444444 88899888 7766543
No 82
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.16 E-value=3.8e-05 Score=66.00 Aligned_cols=169 Identities=9% Similarity=-0.072 Sum_probs=119.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHC----CCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC--Ch--HH
Q 021583 90 TVKKALKTLENEKDWKRIIQVTKWMLSK----GQGRT-MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEG--TP--RI 160 (310)
Q Consensus 90 ~~~~li~~~~~~~~~~~a~~~~~~m~~~----g~~p~-~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~--~~--~~ 160 (310)
.|+.....|...|++++|.+.|...... |-.++ ..+|+.+-..|.+.|++++|...|++..+..... .. ..
T Consensus 39 ~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~ 118 (292)
T 1qqe_A 39 LCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGAN 118 (292)
T ss_dssp HHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 4555577888999999999999886543 32222 5789999999999999999999998876542110 11 23
Q ss_pred HHHHHHHHHHHc-CCHHHHHHHHHHHHHC----CCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHhC---CCCccchheec
Q 021583 161 FFDKMISIYYNR-GMHEKMFEIFADMEEL----GVRPN-VSIVSMMGNAFQKLGMLDKYEKLKKKY---PPPKWEYRYIK 231 (310)
Q Consensus 161 ~y~~li~~~~~~-g~~~~a~~l~~~m~~~----g~~p~-~~ty~~li~~~~~~g~~~~a~~l~~~~---~p~~~~~~~~~ 231 (310)
+|+.+-..|... |++++|++.|++..+. +-.+. ..+|..+...|.+.|++++|...|++. .|+......
T Consensus 119 ~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-- 196 (292)
T 1qqe_A 119 FKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQW-- 196 (292)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGG--
T ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccH--
Confidence 799999999996 9999999999987652 11111 357889999999999999999998862 222110000
Q ss_pred cCcccCChhhhhHhhhc--cCCChhhHHhhhchhhc
Q 021583 232 GKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNES 265 (310)
Q Consensus 232 ~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~ 265 (310)
.....+..+..+ ..|+.++|...++....
T Consensus 197 -----~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 227 (292)
T 1qqe_A 197 -----SLKDYFLKKGLCQLAATDAVAAARTLQEGQS 227 (292)
T ss_dssp -----GHHHHHHHHHHHHHHTTCHHHHHHHHHGGGC
T ss_pred -----HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 001123333333 78999999999987654
No 83
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.14 E-value=0.00018 Score=61.55 Aligned_cols=167 Identities=13% Similarity=0.067 Sum_probs=115.0
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHCC-CCCCH----HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChH----HH
Q 021583 91 VKKALKTLENEKDWKRIIQVTKWMLSKG-QGRTM----GTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR----IF 161 (310)
Q Consensus 91 ~~~li~~~~~~~~~~~a~~~~~~m~~~g-~~p~~----~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~----~~ 161 (310)
+...+..+...|++++|.++++...+.. ..|+. ..|..+...+...|+.++|.+.|++..+......+. .+
T Consensus 78 l~~~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~ 157 (293)
T 3u3w_A 78 FKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYI 157 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHH
Confidence 4445778899999999999999988642 23332 233456667777889999999999998854322221 26
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH----C-CCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccchheeccCcc
Q 021583 162 FDKMISIYYNRGMHEKMFEIFADMEE----L-GVRPN-VSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRV 235 (310)
Q Consensus 162 y~~li~~~~~~g~~~~a~~l~~~m~~----~-g~~p~-~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~~~~~~~~~ 235 (310)
|+.+-..|...|++++|.+.|+...+ . +..+. ..+|..+..+|.+.|++++|...+++... .....+.
T Consensus 158 ~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~------~~~~~~~ 231 (293)
T 3u3w_A 158 ENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIE------ISCRINS 231 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------HHHHTTB
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH------HHHHcCc
Confidence 99999999999999999999999873 2 22232 25889999999999999999999876210 0001111
Q ss_pred cC-ChhhhhHhhhc--cCC-ChhhHHhhhchh
Q 021583 236 RI-PAKPKYELDSA--TEG-KTNEVETTKNPN 263 (310)
Q Consensus 236 ~~-~~~~~~~li~~--~~g-~~~~a~~~~~~m 263 (310)
.. -...+..+-.. ..| ..++|.+.++..
T Consensus 232 ~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~A 263 (293)
T 3u3w_A 232 MALIGQLYYQRGECLRKLEYEEAEIEDAYKKA 263 (293)
T ss_dssp CTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHH
Confidence 11 13344444444 677 458888777544
No 84
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.12 E-value=6.9e-05 Score=57.60 Aligned_cols=117 Identities=10% Similarity=0.017 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHH
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~ 167 (310)
...+-.+-..|.+.|++++|.+.|+...+.. +-+..+|..+-..|.+.|++++|...|++..+.. |.+...|..+-.
T Consensus 31 ~~~~~~la~~y~~~~~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~la~ 107 (150)
T 4ga2_A 31 SIKGFYFAKLYYEAKEYDLAKKYICTYINVQ-ERDPKAHRFLGLLYELEENTDKAVECYRRSVELN--PTQKDLVLKIAE 107 (150)
T ss_dssp HTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhC--CCCHHHHHHHHH
Confidence 3455677888999999999999999988663 3467899999999999999999999999988875 344568999999
Q ss_pred HHHHcCCHHHHHHH-HHHHHHCCCCC-CHHHHHHHHHHHHhcCC
Q 021583 168 IYYNRGMHEKMFEI-FADMEELGVRP-NVSIVSMMGNAFQKLGM 209 (310)
Q Consensus 168 ~~~~~g~~~~a~~l-~~~m~~~g~~p-~~~ty~~li~~~~~~g~ 209 (310)
.|.+.|+.++|.+. ++...+ +.| +...|......+...|+
T Consensus 108 ~~~~~~~~~~aa~~~~~~al~--l~P~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 108 LLCKNDVTDGRAKYWVERAAK--LFPGSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp HHHHHCSSSSHHHHHHHHHHH--HSTTCHHHHHHHHHHHHTCCC
T ss_pred HHHHcCChHHHHHHHHHHHHH--hCcCCHHHHHHHHHHHHHhCc
Confidence 99999998876655 466555 346 46777777776666664
No 85
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.12 E-value=5.3e-05 Score=64.96 Aligned_cols=149 Identities=8% Similarity=-0.039 Sum_probs=118.7
Q ss_pred CCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHH-HHHHHhcCCHHHHHH
Q 021583 66 SNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLL-LNALAEDGRLDEAEE 144 (310)
Q Consensus 66 ~~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~l-l~~~~~~g~~~~A~~ 144 (310)
.+..+.|...+++..+.. +-+...+..+...+.+.|++++|...++..... .|+....... ...+...++.++|.+
T Consensus 130 ~g~~~~A~~~~~~al~~~-P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~--~p~~~~~~~~~~~~l~~~~~~~~a~~ 206 (287)
T 3qou_A 130 ESNYTDALPLLXDAWQLS-NQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQ--DQDTRYQGLVAQIELLXQAADTPEIQ 206 (287)
T ss_dssp TTCHHHHHHHHHHHHHHT-TSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGG--GCSHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred CCCHHHHHHHHHHHHHhC-CcchhHHHHHHHHHHHCCCHHHHHHHHHhCchh--hcchHHHHHHHHHHHHhhcccCccHH
Confidence 366777788888887765 446788999999999999999999999987654 4565443333 334677888899999
Q ss_pred HHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 145 LWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVR-PNVSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 145 ~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~-p~~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
.+++..+.. |.+...+..+-..|...|++++|+..|.+..+..-. .+...+..+...|...|+.++|...|++
T Consensus 207 ~l~~al~~~--P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~ 280 (287)
T 3qou_A 207 QLQQQVAEN--PEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALASXYRR 280 (287)
T ss_dssp HHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHhcC--CccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHHHHHHH
Confidence 999988875 355568999999999999999999999999875322 1267899999999999999999888765
No 86
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=98.11 E-value=6.9e-05 Score=67.22 Aligned_cols=127 Identities=11% Similarity=0.030 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCC-HHHHHHHHHHHHhcCCCCChHHHHHHHH
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGR-LDEAEELWTKIFLDHLEGTPRIFFDKMI 166 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~-~~~A~~~~~~m~~~~~~~~~~~~y~~li 166 (310)
...|+.+-..+.+.|++++|++.|+...... .-+..+|+.+-..+...|+ +++|++.|++..+..- .+...|+.+-
T Consensus 97 ~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~-P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P--~~~~a~~~~g 173 (382)
T 2h6f_A 97 RDVYDYFRAVLQRDERSERAFKLTRDAIELN-AANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQP--KNYQVWHHRR 173 (382)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT--TCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCChHHHHHHHHHHHHhC-ccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCC--CCHHHHHHHH
Confidence 4568888888999999999999999988763 3457889999999999997 9999999999998753 4556899999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 167 SIYYNRGMHEKMFEIFADMEELGVRP-NVSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 167 ~~~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
..|...|++++|+..|+...+. .| +...|..+-.++.+.|++++|+..|++
T Consensus 174 ~~~~~~g~~~eAl~~~~kal~l--dP~~~~a~~~lg~~~~~~g~~~eAl~~~~~ 225 (382)
T 2h6f_A 174 VLVEWLRDPSQELEFIADILNQ--DAKNYHAWQHRQWVIQEFKLWDNELQYVDQ 225 (382)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHTCCTTHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHHh--CccCHHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 9999999999999999999875 35 679999999999999999999999876
No 87
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.11 E-value=6.6e-05 Score=54.94 Aligned_cols=114 Identities=11% Similarity=0.059 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC-Ch----HHHH
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEG-TP----RIFF 162 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~-~~----~~~y 162 (310)
...+..+...+...|++++|...|+...+.. ..+...+..+...|...|++++|...|++..+..-.. .+ ..+|
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELD-PTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-CccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 3567788888999999999999999988663 4567888899999999999999999999888763210 11 4578
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q 021583 163 DKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAF 204 (310)
Q Consensus 163 ~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~ 204 (310)
..+...|.+.|++++|.+.|+...+. .|+......+..+.
T Consensus 83 ~~la~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~l~~~~ 122 (131)
T 1elr_A 83 ARIGNSYFKEEKYKDAIHFYNKSLAE--HRTPDVLKKCQQAE 122 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH--CCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHh--CCCHHHHHHHHHHH
Confidence 88999999999999999999998874 35665555554443
No 88
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.11 E-value=0.00016 Score=58.33 Aligned_cols=131 Identities=9% Similarity=-0.030 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 021583 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKI 149 (310)
Q Consensus 70 ~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m 149 (310)
+.|...+++. +.|+...+..+...|.+.|++++|.+.|+...... ..+...|..+-..|...|++++|.+.|++.
T Consensus 23 ~~A~~~~~~a----~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a 97 (213)
T 1hh8_A 23 KGALDAFSAV----QDPHSRICFNIGCMYTILKNMTEAEKAFTRSINRD-KHLAVAYFQRGMLYYQTEKYDLAIKDLKEA 97 (213)
T ss_dssp HHHHHHHHTS----SSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHH----cCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-ccchHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 3335555443 46788999999999999999999999999988663 456789999999999999999999999999
Q ss_pred HhcCCC--------------CChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHH
Q 021583 150 FLDHLE--------------GTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEK 215 (310)
Q Consensus 150 ~~~~~~--------------~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~ 215 (310)
.+..-. +.....|..+-..|.+.|++++|.+.|+...+. .|+. ..+..+++..
T Consensus 98 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--~p~~-----------~~~~~~~a~~ 164 (213)
T 1hh8_A 98 LIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSM--KSEP-----------RHSKIDKAME 164 (213)
T ss_dssp HHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--CCSG-----------GGGHHHHHHH
T ss_pred HHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHc--Cccc-----------ccchHHHHHH
Confidence 885421 112257999999999999999999999998864 3543 2345556655
Q ss_pred HHH
Q 021583 216 LKK 218 (310)
Q Consensus 216 l~~ 218 (310)
.++
T Consensus 165 ~~~ 167 (213)
T 1hh8_A 165 CVW 167 (213)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 89
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.10 E-value=1.3e-05 Score=71.57 Aligned_cols=192 Identities=14% Similarity=0.056 Sum_probs=127.0
Q ss_pred CcHHHHHHHHHHHHHcCCCCCH----HHHHHHHHHHHhcCCHHHHHHHHHHHHHC----CC-CCCHHHHHHHHHHHHhcC
Q 021583 67 NVKEEVYGALDSFIAWELEFPL----ITVKKALKTLENEKDWKRIIQVTKWMLSK----GQ-GRTMGTYFLLLNALAEDG 137 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~~----~~~~~li~~~~~~~~~~~a~~~~~~m~~~----g~-~p~~~ty~~ll~~~~~~g 137 (310)
+..+.|...+++..+.+ +.+. ..+..+...|...|++++|.+.|++..+. +- .....++..+-..|...|
T Consensus 62 g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g 140 (411)
T 4a1s_A 62 GDCRAGVAFFQAAIQAG-TEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMG 140 (411)
T ss_dssp TCHHHHHHHHHHHHHHC-CSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHHhc-ccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCC
Confidence 33444477777776653 2233 47888889999999999999999986543 21 223577888889999999
Q ss_pred CHHHHHHHHHHHHhcC----CCCChHHHHHHHHHHHHHcCC-----------------HHHHHHHHHHHHHC----CCCC
Q 021583 138 RLDEAEELWTKIFLDH----LEGTPRIFFDKMISIYYNRGM-----------------HEKMFEIFADMEEL----GVRP 192 (310)
Q Consensus 138 ~~~~A~~~~~~m~~~~----~~~~~~~~y~~li~~~~~~g~-----------------~~~a~~l~~~m~~~----g~~p 192 (310)
++++|.+.|++..+.. -.+....+|..+-..|...|+ +++|.+.+++..+. +-.+
T Consensus 141 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~ 220 (411)
T 4a1s_A 141 RFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRG 220 (411)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred CHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 9999999998876541 111122478899999999999 99999988876432 2222
Q ss_pred C-HHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhh
Q 021583 193 N-VSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNE 264 (310)
Q Consensus 193 ~-~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~ 264 (310)
. ..+|..+...|...|++++|.+.+++.... .... .........+..+... ..|++++|.+.++...
T Consensus 221 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~---~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 290 (411)
T 4a1s_A 221 AQGRACGNLGNTYYLLGDFQAAIEHHQERLRI---AREF--GDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTL 290 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---HHHH--TCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH---HHhc--CCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHH
Confidence 2 367888889999999999999998762100 0000 0000011233333333 7788888877775543
No 90
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.10 E-value=0.00013 Score=64.15 Aligned_cols=128 Identities=15% Similarity=0.008 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCC--------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRT--------------MGTYFLLLNALAEDGRLDEAEELWTKIFLDH 153 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~--------------~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~ 153 (310)
...+..+-..|.+.|++++|...|+...+..-... ...|..+-..|.+.|++++|.+.|++..+..
T Consensus 147 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 226 (336)
T 1p5q_A 147 STIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELD 226 (336)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 45788888899999999999999999886632221 5899999999999999999999999999875
Q ss_pred CCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhcCCHHHHHH-HHHh
Q 021583 154 LEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP-NVSIVSMMGNAFQKLGMLDKYEK-LKKK 219 (310)
Q Consensus 154 ~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~li~~~~~~g~~~~a~~-l~~~ 219 (310)
|.+...|..+-.+|...|++++|...|+...+. .| +...+..+..++.+.|+.++|.+ +|++
T Consensus 227 --p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l--~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~ 290 (336)
T 1p5q_A 227 --SNNEKGLSRRGEAHLAVNDFELARADFQKVLQL--YPNNKAAKTQLAVCQQRIRRQLAREKKLYAN 290 (336)
T ss_dssp --TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345568999999999999999999999998874 35 57889999999999999999843 4443
No 91
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.10 E-value=6.8e-05 Score=59.81 Aligned_cols=134 Identities=6% Similarity=-0.128 Sum_probs=102.8
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHC----CCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc----CCCC
Q 021583 86 FPLITVKKALKTLENEKDWKRIIQVTKWMLSK----GQGR-TMGTYFLLLNALAEDGRLDEAEELWTKIFLD----HLEG 156 (310)
Q Consensus 86 p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----g~~p-~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~----~~~~ 156 (310)
....++..+-..|...|++++|...+++.... +..+ ...++..+-..|...|++++|.+.+++..+. +-.+
T Consensus 24 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 103 (203)
T 3gw4_A 24 TASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDP 103 (203)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccH
Confidence 34678889999999999999999999987642 2222 3567888889999999999999999887654 2111
Q ss_pred Ch-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHC----CCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 157 TP-RIFFDKMISIYYNRGMHEKMFEIFADMEEL----GVRPN-VSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 157 ~~-~~~y~~li~~~~~~g~~~~a~~l~~~m~~~----g~~p~-~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
.. ...++.+-..|...|++++|.+.+++..+. +-... ..++..+...|...|++++|.+.+++
T Consensus 104 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 172 (203)
T 3gw4_A 104 LAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLR 172 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHH
Confidence 11 237889999999999999999999887632 21111 24578888999999999999998865
No 92
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.10 E-value=9.8e-05 Score=63.27 Aligned_cols=153 Identities=16% Similarity=0.076 Sum_probs=112.7
Q ss_pred CcHHHHHHHHHHHHHcC-CCCCH----HHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCC-CC----HHHHHHHHHHHHhc
Q 021583 67 NVKEEVYGALDSFIAWE-LEFPL----ITVKKALKTLENEKDWKRIIQVTKWMLSKGQG-RT----MGTYFLLLNALAED 136 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~-~~p~~----~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~-p~----~~ty~~ll~~~~~~ 136 (310)
+..+.+...+++..... ..|+. ..+..+...+...+++++|.+.|+...+.... ++ ..+|+.+-..|...
T Consensus 89 ~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~ 168 (293)
T 3u3w_A 89 KRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAEN 168 (293)
T ss_dssp TCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHc
Confidence 45666777777776532 22332 13344666677778999999999998874322 33 34799999999999
Q ss_pred CCHHHHHHHHHHHHhc----CCCCChH-HHHHHHHHHHHHcCCHHHHHHHHHHHHH----CCCCCC-HHHHHHHHHHHHh
Q 021583 137 GRLDEAEELWTKIFLD----HLEGTPR-IFFDKMISIYYNRGMHEKMFEIFADMEE----LGVRPN-VSIVSMMGNAFQK 206 (310)
Q Consensus 137 g~~~~A~~~~~~m~~~----~~~~~~~-~~y~~li~~~~~~g~~~~a~~l~~~m~~----~g~~p~-~~ty~~li~~~~~ 206 (310)
|++++|...|++..+. ....... .+|+.+-..|.+.|++++|.+.+++..+ .+-.+. ..+|..+-.+|.+
T Consensus 169 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~ 248 (293)
T 3u3w_A 169 GYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRK 248 (293)
T ss_dssp TCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 9999999999988842 1111222 3899999999999999999999888653 344444 5889999999999
Q ss_pred cCC-HHHHHHHHHh
Q 021583 207 LGM-LDKYEKLKKK 219 (310)
Q Consensus 207 ~g~-~~~a~~l~~~ 219 (310)
.|+ .++|.+.|++
T Consensus 249 ~g~~~~~A~~~~~~ 262 (293)
T 3u3w_A 249 LEYEEAEIEDAYKK 262 (293)
T ss_dssp TTCCHHHHHHHHHH
T ss_pred hCCcHHHHHHHHHH
Confidence 994 6999888765
No 93
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.09 E-value=0.00017 Score=53.67 Aligned_cols=106 Identities=8% Similarity=-0.075 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHH
Q 021583 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168 (310)
Q Consensus 89 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~ 168 (310)
..+...-..|.+.|++++|.+.|++..+.. +.+...|..+-..|.+.|++++|++.|++..+..- .+...|..+-.+
T Consensus 14 ~~~~~~G~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p--~~~~a~~~lg~~ 90 (126)
T 4gco_A 14 QEEKNKGNEYFKKGDYPTAMRHYNEAVKRD-PENAILYSNRAACLTKLMEFQRALDDCDTCIRLDS--KFIKGYIRKAAC 90 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhh--hhhHHHHHHHHH
Confidence 456666777888888888888888877552 34677888888888888888888888888877643 444578888888
Q ss_pred HHHcCCHHHHHHHHHHHHHCCCCCC-HHHHHH
Q 021583 169 YYNRGMHEKMFEIFADMEELGVRPN-VSIVSM 199 (310)
Q Consensus 169 ~~~~g~~~~a~~l~~~m~~~g~~p~-~~ty~~ 199 (310)
|...|++++|.+.|+...+. .|+ ...+..
T Consensus 91 ~~~~~~~~~A~~~~~~al~l--~P~~~~a~~~ 120 (126)
T 4gco_A 91 LVAMREWSKAQRAYEDALQV--DPSNEEAREG 120 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHH--CTTCHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHH--CcCCHHHHHH
Confidence 88888888888888887763 454 333333
No 94
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.07 E-value=3.3e-05 Score=66.86 Aligned_cols=164 Identities=8% Similarity=-0.070 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHC----CCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC--CCh--
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSK----GQGR-TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLE--GTP-- 158 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----g~~p-~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~--~~~-- 158 (310)
..+|+.+...|.+.|++++|.+.|+...+. |-.. -..++..+-..|.. |++++|++.|++..+..-. ...
T Consensus 76 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~ 154 (307)
T 2ifu_A 76 AKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQA 154 (307)
T ss_dssp HHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHH
Confidence 457889999999999999999999986533 2111 14677888888888 9999999999887654210 011
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHC----CCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccchheeccC
Q 021583 159 RIFFDKMISIYYNRGMHEKMFEIFADMEEL----GVRPN-VSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGK 233 (310)
Q Consensus 159 ~~~y~~li~~~~~~g~~~~a~~l~~~m~~~----g~~p~-~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~~~~~~~ 233 (310)
..+|+.+-..|.+.|++++|.+.|++..+. +..+. ...+..+..++...|++++|...|++.. ....+..
T Consensus 155 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~---- 229 (307)
T 2ifu_A 155 AELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSG---- 229 (307)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTT----
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCC----
Confidence 247999999999999999999999988652 22222 2367777888888999999999998733 1111111
Q ss_pred cccCChhhhhHhhhc-cCCChhhHHhh
Q 021583 234 RVRIPAKPKYELDSA-TEGKTNEVETT 259 (310)
Q Consensus 234 ~~~~~~~~~~~li~~-~~g~~~~a~~~ 259 (310)
.........++.+ ..|+.+.+.++
T Consensus 230 --~~e~~~l~~l~~~~~~~d~~~~~~~ 254 (307)
T 2ifu_A 230 --SEDCAALEDLLQAYDEQDEEQLLRV 254 (307)
T ss_dssp --SHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 1112233444555 66776666553
No 95
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.06 E-value=1e-05 Score=71.77 Aligned_cols=187 Identities=12% Similarity=0.024 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHcCCCCC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHHC----CCCCC-HHHHHHHHHHHHhcCCHHH
Q 021583 71 EVYGALDSFIAWELEFP----LITVKKALKTLENEKDWKRIIQVTKWMLSK----GQGRT-MGTYFLLLNALAEDGRLDE 141 (310)
Q Consensus 71 ~~~~~~~~m~~~~~~p~----~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----g~~p~-~~ty~~ll~~~~~~g~~~~ 141 (310)
.|...+++..+.+ +.+ ...+..+...|...|++++|...|+..... +-.|. ..++..+-..|...|++++
T Consensus 27 ~A~~~~~~al~~~-~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 105 (406)
T 3sf4_A 27 AGVSFFEAAVQVG-TEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDE 105 (406)
T ss_dssp HHHHHHHHHHHHC-CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHhcC-cccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHcCCHHH
Confidence 3366666666553 223 356778888888899999999988875422 22222 4677778888888999999
Q ss_pred HHHHHHHHHhcCCC---CCh-HHHHHHHHHHHHHcCC--------------------HHHHHHHHHHHHH----CCCCCC
Q 021583 142 AEELWTKIFLDHLE---GTP-RIFFDKMISIYYNRGM--------------------HEKMFEIFADMEE----LGVRPN 193 (310)
Q Consensus 142 A~~~~~~m~~~~~~---~~~-~~~y~~li~~~~~~g~--------------------~~~a~~l~~~m~~----~g~~p~ 193 (310)
|...+++..+..-. +.. ..+|..+-..|...|+ +++|.+.+..... .+-.|.
T Consensus 106 A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~ 185 (406)
T 3sf4_A 106 AIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTALGDRAA 185 (406)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhccCcHH
Confidence 99888876654210 011 2378888888888898 8888888877543 222222
Q ss_pred -HHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchh
Q 021583 194 -VSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPN 263 (310)
Q Consensus 194 -~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m 263 (310)
..+|..+...|...|++++|...+++.... ... ..........+..+... ..|++++|.+.++..
T Consensus 186 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~---~~~--~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 253 (406)
T 3sf4_A 186 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLI---AKE--FGDKAAERRAYSNLGNAYIFLGEFETASEYYKKT 253 (406)
T ss_dssp HHHHHHHHHHHHHHHTBHHHHHHHHHHHHHH---HHH--TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHH---HHh--cCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Confidence 357788888888899999998888652100 000 00000111233333333 677777777777554
No 96
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.06 E-value=3.5e-05 Score=68.62 Aligned_cols=165 Identities=9% Similarity=-0.017 Sum_probs=119.9
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHC----CCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc----CCCCCh
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSK----GQGR-TMGTYFLLLNALAEDGRLDEAEELWTKIFLD----HLEGTP 158 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----g~~p-~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~----~~~~~~ 158 (310)
..+++.+-..|...|++++|.+.|+...+. +-.+ ...++..+-..|...|++++|.+.|++..+. +..+..
T Consensus 184 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 263 (383)
T 3ulq_A 184 LQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSL 263 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhH
Confidence 457888899999999999999999987633 2111 1357888999999999999999999988773 221123
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHC----CCCCCHHHHHHHHHHHHhcCC---HHHHHHHHHhCCCCccchheec
Q 021583 159 RIFFDKMISIYYNRGMHEKMFEIFADMEEL----GVRPNVSIVSMMGNAFQKLGM---LDKYEKLKKKYPPPKWEYRYIK 231 (310)
Q Consensus 159 ~~~y~~li~~~~~~g~~~~a~~l~~~m~~~----g~~p~~~ty~~li~~~~~~g~---~~~a~~l~~~~~p~~~~~~~~~ 231 (310)
..++..+-..|.+.|++++|.+.+++..+. +-......+..+-..|...|+ +++|..++++....
T Consensus 264 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~-------- 335 (383)
T 3ulq_A 264 PQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAIQGFFDFLESKMLY-------- 335 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHTTCH--------
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCcCH--------
Confidence 358999999999999999999999987642 111223446778888888999 88888888764210
Q ss_pred cCcccCChhhhhHhhhc--cCCChhhHHhhhchhh
Q 021583 232 GKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNE 264 (310)
Q Consensus 232 ~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~ 264 (310)
......+..|-.. ..|++++|.++++...
T Consensus 336 ----~~~~~~~~~la~~y~~~g~~~~A~~~~~~al 366 (383)
T 3ulq_A 336 ----ADLEDFAIDVAKYYHERKNFQKASAYFLKVE 366 (383)
T ss_dssp ----HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 1112233344444 8999999998886543
No 97
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.06 E-value=0.00037 Score=59.58 Aligned_cols=153 Identities=16% Similarity=0.089 Sum_probs=109.6
Q ss_pred CcHHHHHHHHHHHHHcCCCCC-----HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCC---CCC--HHHHHHHHHHHHhc
Q 021583 67 NVKEEVYGALDSFIAWELEFP-----LITVKKALKTLENEKDWKRIIQVTKWMLSKGQ---GRT--MGTYFLLLNALAED 136 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~-----~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~---~p~--~~ty~~ll~~~~~~ 136 (310)
+..+.+...+.+..+..-..+ ...+..+...+...|++++|.+.|+...+... .+. ..+|+.+-..|...
T Consensus 89 ~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~ 168 (293)
T 2qfc_A 89 KRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAEN 168 (293)
T ss_dssp TCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHc
Confidence 445566666666555432211 12244455667788999999999999875322 122 45899999999999
Q ss_pred CCHHHHHHHHHHHHh---cCCCCCh-H-HHHHHHHHHHHHcCCHHHHHHHHHHHHHC----CCCCC-HHHHHHHHHHHHh
Q 021583 137 GRLDEAEELWTKIFL---DHLEGTP-R-IFFDKMISIYYNRGMHEKMFEIFADMEEL----GVRPN-VSIVSMMGNAFQK 206 (310)
Q Consensus 137 g~~~~A~~~~~~m~~---~~~~~~~-~-~~y~~li~~~~~~g~~~~a~~l~~~m~~~----g~~p~-~~ty~~li~~~~~ 206 (310)
|++++|...|++..+ ..-.... . .+|+.+-..|.+.|++++|.+.+++..+. +.... ..+|..+..+|.+
T Consensus 169 ~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~ 248 (293)
T 2qfc_A 169 GYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRK 248 (293)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 999999999998873 2211111 1 48999999999999999999999987542 22222 5789999999999
Q ss_pred cCCHHHH-HHHHHh
Q 021583 207 LGMLDKY-EKLKKK 219 (310)
Q Consensus 207 ~g~~~~a-~~l~~~ 219 (310)
.|+.++| ...+++
T Consensus 249 ~g~~~~Ai~~~~~~ 262 (293)
T 2qfc_A 249 LEYEEAEIEDAYKK 262 (293)
T ss_dssp TTCCHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHH
Confidence 9999999 776654
No 98
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.05 E-value=0.00021 Score=61.90 Aligned_cols=146 Identities=5% Similarity=-0.113 Sum_probs=107.3
Q ss_pred CcHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCC-----CHHHHHHHHHHHH--hcC-
Q 021583 67 NVKEEVYGALDSFIAWEL-EFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGR-----TMGTYFLLLNALA--EDG- 137 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~-~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p-----~~~ty~~ll~~~~--~~g- 137 (310)
+..+.|.+++.+....|- .-+...+..++..+.+.|+++.|.+.++.|.+. .| +-.+...|..++. ..|
T Consensus 114 g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~--~~d~~~~~d~~l~~Laea~v~l~~g~ 191 (310)
T 3mv2_B 114 GDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNA--IEDTVSGDNEMILNLAESYIKFATNK 191 (310)
T ss_dssp TCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--SCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--CccccccchHHHHHHHHHHHHHHhCC
Confidence 667777888887766553 235778889999999999999999999999876 46 3566666666633 334
Q ss_pred -CHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHC-----CC---CC-CHHHHHHHHHHHHhc
Q 021583 138 -RLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL-----GV---RP-NVSIVSMMGNAFQKL 207 (310)
Q Consensus 138 -~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~-----g~---~p-~~~ty~~li~~~~~~ 207 (310)
+.++|..+|+++.+.. ++..+-..+++++.+.|++++|++.++.+.+. +. .| |..+...+|......
T Consensus 192 ~~~q~A~~~f~El~~~~---p~~~~~~lLln~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~l 268 (310)
T 3mv2_B 192 ETATSNFYYYEELSQTF---PTWKTQLGLLNLHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQ 268 (310)
T ss_dssp STTTHHHHHHHHHHTTS---CSHHHHHHHHHHHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHhC---CCcccHHHHHHHHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHh
Confidence 8999999999987653 33233445555899999999999999977643 11 25 567776777777777
Q ss_pred CCHHHHHHHHHh
Q 021583 208 GMLDKYEKLKKK 219 (310)
Q Consensus 208 g~~~~a~~l~~~ 219 (310)
|+ +|.+++++
T Consensus 269 gk--~a~~l~~q 278 (310)
T 3mv2_B 269 GL--DTEDLTNQ 278 (310)
T ss_dssp TC--TTHHHHHH
T ss_pred Ch--HHHHHHHH
Confidence 76 77777765
No 99
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.05 E-value=0.00046 Score=49.21 Aligned_cols=98 Identities=10% Similarity=-0.088 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHH
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~ 167 (310)
...+..+...+...|++++|.+.|+...... +.+...+..+...+...|++++|...+++..+..- .+...|..+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~--~~~~~~~~~a~ 80 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLD-PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKP--DWGKGYSRKAA 80 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT--TCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCc--ccHHHHHHHHH
Confidence 4567777888888999999999998877652 34677888888888889999999999988887643 34457888888
Q ss_pred HHHHcCCHHHHHHHHHHHHHC
Q 021583 168 IYYNRGMHEKMFEIFADMEEL 188 (310)
Q Consensus 168 ~~~~~g~~~~a~~l~~~m~~~ 188 (310)
.|...|++++|.+.++...+.
T Consensus 81 ~~~~~~~~~~A~~~~~~~~~~ 101 (118)
T 1elw_A 81 ALEFLNRFEEAKRTYEEGLKH 101 (118)
T ss_dssp HHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHhhHHHHHHHHHHHHHc
Confidence 888999999999998887754
No 100
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.03 E-value=0.00013 Score=56.34 Aligned_cols=102 Identities=8% Similarity=-0.079 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHH
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~ 167 (310)
...+..+-..+.+.|++++|.+.|+...... +-+...|..+-..|...|++++|.+.|++..+..- .+...|..+-.
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~-P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P--~~~~~~~~lg~ 112 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYD-FYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGK--NDYTPVFHTGQ 112 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSS--SCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCC--CCcHHHHHHHH
Confidence 4467777778888888999998888877652 34677888888888888899999888888887653 34457888888
Q ss_pred HHHHcCCHHHHHHHHHHHHHCCCCCCH
Q 021583 168 IYYNRGMHEKMFEIFADMEELGVRPNV 194 (310)
Q Consensus 168 ~~~~~g~~~~a~~l~~~m~~~g~~p~~ 194 (310)
+|.+.|++++|.+.|+...+. .||.
T Consensus 113 ~~~~lg~~~eA~~~~~~al~l--~~~~ 137 (151)
T 3gyz_A 113 CQLRLKAPLKAKECFELVIQH--SNDE 137 (151)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH--CCCH
T ss_pred HHHHcCCHHHHHHHHHHHHHh--CCCH
Confidence 888888998888888887764 3554
No 101
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.02 E-value=0.00011 Score=69.14 Aligned_cols=148 Identities=9% Similarity=0.058 Sum_probs=103.6
Q ss_pred cCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHH
Q 021583 101 EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFE 180 (310)
Q Consensus 101 ~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~ 180 (310)
.|++++|.+.|++..+.. .-+...|..+-..|...|++++|.+.|++..+.. +.+...|..+-..|...|++++|.+
T Consensus 2 ~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~lg~~~~~~g~~~~A~~ 78 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHR-PQDFVAWLMLADAELGMGDTTAGEMAVQRGLALH--PGHPEAVARLGRVRWTQQRHAEAAV 78 (568)
T ss_dssp --------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTS--TTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHCCCHHHHHH
Confidence 478899999999877542 3457889999999999999999999999998864 3455689999999999999999999
Q ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhC---CCCccchheeccCcccCChhhhhHhhhc--cC---CC
Q 021583 181 IFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKY---PPPKWEYRYIKGKRVRIPAKPKYELDSA--TE---GK 252 (310)
Q Consensus 181 l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~---~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~---g~ 252 (310)
.+++..+.. +-+...|..+..+|...|++++|.+.|++. .|+ +...+..+... .. |+
T Consensus 79 ~~~~al~~~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~--------------~~~~~~~l~~~~~~~~~~g~ 143 (568)
T 2vsy_A 79 LLQQASDAA-PEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPE--------------EPYITAQLLNWRRRLCDWRA 143 (568)
T ss_dssp HHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--------------CHHHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHhcC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--------------CHHHHHHHHHHHHHhhcccc
Confidence 999988753 225789999999999999999999998762 222 23344444444 56 88
Q ss_pred hhhHHhhhchhhcC
Q 021583 253 TNEVETTKNPNESS 266 (310)
Q Consensus 253 ~~~a~~~~~~m~~~ 266 (310)
.++|.+.++.....
T Consensus 144 ~~~A~~~~~~al~~ 157 (568)
T 2vsy_A 144 LDVLSAQVRAAVAQ 157 (568)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 99999888776543
No 102
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.02 E-value=0.00087 Score=59.39 Aligned_cols=153 Identities=11% Similarity=-0.027 Sum_probs=115.8
Q ss_pred CcHHHHHHHHHHHHHcC-CCCC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHHC--CC---CC-CHHHHHHHHHHHHh
Q 021583 67 NVKEEVYGALDSFIAWE-LEFP----LITVKKALKTLENEKDWKRIIQVTKWMLSK--GQ---GR-TMGTYFLLLNALAE 135 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~-~~p~----~~~~~~li~~~~~~~~~~~a~~~~~~m~~~--g~---~p-~~~ty~~ll~~~~~ 135 (310)
+..+.|...+++..+.- -.++ ..++..+-..|...|+++.|.+.++...+. .. .+ ...+++.+-..|..
T Consensus 115 g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~ 194 (378)
T 3q15_A 115 KEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDD 194 (378)
T ss_dssp TCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHH
Confidence 55666778777766531 1122 457888899999999999999999986632 11 11 25678889999999
Q ss_pred cCCHHHHHHHHHHHHhc----CCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHC----CCCCCHHHHHHHHHHHHhc
Q 021583 136 DGRLDEAEELWTKIFLD----HLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL----GVRPNVSIVSMMGNAFQKL 207 (310)
Q Consensus 136 ~g~~~~A~~~~~~m~~~----~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~----g~~p~~~ty~~li~~~~~~ 207 (310)
.|++++|++.|++..+. +-......+++.+-..|...|++++|.+.+++..+. +-+....++..+...|.+.
T Consensus 195 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~ 274 (378)
T 3q15_A 195 FKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKA 274 (378)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHT
T ss_pred hCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHC
Confidence 99999999999887753 211011237899999999999999999999988751 2222368889999999999
Q ss_pred CCHHHHHHHHHh
Q 021583 208 GMLDKYEKLKKK 219 (310)
Q Consensus 208 g~~~~a~~l~~~ 219 (310)
|+.++|...+++
T Consensus 275 g~~~~A~~~~~~ 286 (378)
T 3q15_A 275 GQTQKAFQFIEE 286 (378)
T ss_dssp TCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 999999999876
No 103
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.02 E-value=0.00019 Score=53.40 Aligned_cols=92 Identities=7% Similarity=-0.033 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHH
Q 021583 124 GTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP-NVSIVSMMGN 202 (310)
Q Consensus 124 ~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~li~ 202 (310)
..+...-+.|.+.|++++|++.|++..+.. |.+...|..+-.+|.+.|++++|++.++...+. .| +...|..+..
T Consensus 14 ~~~~~~G~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--~p~~~~a~~~lg~ 89 (126)
T 4gco_A 14 QEEKNKGNEYFKKGDYPTAMRHYNEAVKRD--PENAILYSNRAACLTKLMEFQRALDDCDTCIRL--DSKFIKGYIRKAA 89 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHh--hhhhhHHHHHHHH
Confidence 567778889999999999999999998875 355678999999999999999999999998874 34 5788999999
Q ss_pred HHHhcCCHHHHHHHHHh
Q 021583 203 AFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 203 ~~~~~g~~~~a~~l~~~ 219 (310)
+|...|++++|.+.|++
T Consensus 90 ~~~~~~~~~~A~~~~~~ 106 (126)
T 4gco_A 90 CLVAMREWSKAQRAYED 106 (126)
T ss_dssp HHHHTTCHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHH
Confidence 99999999999999986
No 104
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.02 E-value=6.7e-05 Score=66.46 Aligned_cols=132 Identities=17% Similarity=0.055 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCC-CCCC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC--CCh--
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKG-QGRT----MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLE--GTP-- 158 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g-~~p~----~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~--~~~-- 158 (310)
..++..+...|...|++++|.+.|+...+.. -.++ ..+|..+...|...|++++|...+++..+..-. ...
T Consensus 187 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 266 (406)
T 3sf4_A 187 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 266 (406)
T ss_dssp HHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHH
Confidence 4578888999999999999999999876331 1122 348888999999999999999999987654211 011
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHC----CCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 159 RIFFDKMISIYYNRGMHEKMFEIFADMEEL----GVRPN-VSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 159 ~~~y~~li~~~~~~g~~~~a~~l~~~m~~~----g~~p~-~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
..+|..+-..|...|++++|.+.+++..+. +-.+. ..++..+..+|...|++++|.+.+++
T Consensus 267 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 332 (406)
T 3sf4_A 267 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEK 332 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 247899999999999999999999987643 21221 56888999999999999999999876
No 105
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.01 E-value=0.00031 Score=52.19 Aligned_cols=99 Identities=4% Similarity=-0.164 Sum_probs=73.1
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHH
Q 021583 86 FPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKM 165 (310)
Q Consensus 86 p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~l 165 (310)
.+...+..+-..+.+.|++++|...|+...... ..+...|..+...|...|++++|...|++..+..- .+...|..+
T Consensus 7 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p--~~~~~~~~l 83 (137)
T 3q49_B 7 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRN-PLVAVYYTNRALCYLKMQQPEQALADCRRALELDG--QSVKAHFFL 83 (137)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhC-cCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc--hhHHHHHHH
Confidence 356677777778888888888888888766553 33567777788888888888888888887777642 344577778
Q ss_pred HHHHHHcCCHHHHHHHHHHHHH
Q 021583 166 ISIYYNRGMHEKMFEIFADMEE 187 (310)
Q Consensus 166 i~~~~~~g~~~~a~~l~~~m~~ 187 (310)
-..|...|++++|.+.|+...+
T Consensus 84 ~~~~~~~~~~~~A~~~~~~a~~ 105 (137)
T 3q49_B 84 GQCQLEMESYDEAIANLQRAYS 105 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHH
Confidence 8888888888888888777654
No 106
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.01 E-value=5.9e-05 Score=57.25 Aligned_cols=132 Identities=17% Similarity=0.042 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCC-CCC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC--CCh--
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQ-GRT----MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLE--GTP-- 158 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~-~p~----~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~--~~~-- 158 (310)
..++..+-..|...|++++|.+.++...+..- .++ ..++..+-..|...|++++|.+.+++..+..-. .++
T Consensus 9 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 88 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 88 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHH
Confidence 34678888889999999999999998764311 112 257888999999999999999999987654211 111
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHC----CCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 159 RIFFDKMISIYYNRGMHEKMFEIFADMEEL----GVRPN-VSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 159 ~~~y~~li~~~~~~g~~~~a~~l~~~m~~~----g~~p~-~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
..++..+-..|...|++++|.+.+++..+. +-.+. ..++..+...|...|++++|.+.+++
T Consensus 89 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 154 (164)
T 3ro3_A 89 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEK 154 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 237888899999999999999999887642 22222 36788889999999999999999865
No 107
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.01 E-value=0.00032 Score=54.28 Aligned_cols=99 Identities=11% Similarity=-0.033 Sum_probs=85.1
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHH
Q 021583 87 PLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMI 166 (310)
Q Consensus 87 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li 166 (310)
+...+..+-..|.+.|++++|.+.|+...+.. .-+...|..+-..|.+.|++++|+..|++..+..- .+...|..+-
T Consensus 10 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p--~~~~~~~~lg 86 (164)
T 3sz7_A 10 ESDKLKSEGNAAMARKEYSKAIDLYTQALSIA-PANPIYLSNRAAAYSASGQHEKAAEDAELATVVDP--KYSKAWSRLG 86 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC--CCHHHHHHHH
Confidence 35678888889999999999999999988663 34788899999999999999999999999988753 4556899999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHC
Q 021583 167 SIYYNRGMHEKMFEIFADMEEL 188 (310)
Q Consensus 167 ~~~~~~g~~~~a~~l~~~m~~~ 188 (310)
..|...|++++|.+.|+...+.
T Consensus 87 ~~~~~~g~~~~A~~~~~~al~~ 108 (164)
T 3sz7_A 87 LARFDMADYKGAKEAYEKGIEA 108 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHHh
Confidence 9999999999999999998764
No 108
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.01 E-value=0.0001 Score=57.00 Aligned_cols=93 Identities=15% Similarity=0.146 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHH
Q 021583 123 MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP-NVSIVSMMG 201 (310)
Q Consensus 123 ~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~li 201 (310)
...+..+-..+.+.|++++|...|++..+.. |.+...|..+-.+|...|++++|.+.|+...+. .| +...|..+-
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~--P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l--~P~~~~~~~~lg 111 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYD--FYNVDYIMGLAAIYQIKEQFQQAADLYAVAFAL--GKNDYTPVFHTG 111 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--SSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhh--CCCCcHHHHHHH
Confidence 4677788889999999999999999999875 355568999999999999999999999998874 35 468899999
Q ss_pred HHHHhcCCHHHHHHHHHh
Q 021583 202 NAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 202 ~~~~~~g~~~~a~~l~~~ 219 (310)
.+|...|++++|...|++
T Consensus 112 ~~~~~lg~~~eA~~~~~~ 129 (151)
T 3gyz_A 112 QCQLRLKAPLKAKECFEL 129 (151)
T ss_dssp HHHHHTTCHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHH
Confidence 999999999999999876
No 109
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.00 E-value=0.00011 Score=62.91 Aligned_cols=98 Identities=5% Similarity=-0.115 Sum_probs=83.3
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHH
Q 021583 87 PLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMI 166 (310)
Q Consensus 87 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li 166 (310)
+...+..+-..+.+.|++++|...|+...+.. .-+...|..+-..|.+.|++++|++.+++..+.. +.+...|..+-
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~lg 79 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRN-PLVAVYYTNRALCYLKMQQPEQALADCRRALELD--GQSVKAHFFLG 79 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSC--TTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--CCCHHHHHHHH
Confidence 45677888889999999999999999987652 3378889999999999999999999999988764 34556899999
Q ss_pred HHHHHcCCHHHHHHHHHHHHH
Q 021583 167 SIYYNRGMHEKMFEIFADMEE 187 (310)
Q Consensus 167 ~~~~~~g~~~~a~~l~~~m~~ 187 (310)
.+|...|++++|.+.|+...+
T Consensus 80 ~~~~~~g~~~~A~~~~~~al~ 100 (281)
T 2c2l_A 80 QCQLEMESYDEAIANLQRAYS 100 (281)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHH
Confidence 999999999999999988765
No 110
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=97.99 E-value=0.00026 Score=54.28 Aligned_cols=115 Identities=6% Similarity=-0.074 Sum_probs=89.6
Q ss_pred cHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHH
Q 021583 68 VKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWT 147 (310)
Q Consensus 68 ~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~ 147 (310)
..+.|...+++..+.. +.+...+..+...+.+.|++++|.+.|+...+.. ..+...|..+...+...|++++|.+.|+
T Consensus 28 ~~~~A~~~~~~al~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 105 (166)
T 1a17_A 28 DYENAIKFYSQAIELN-PSNAIYYGNRSLAYLRTECYGYALGDATRAIELD-KKYIKGYYRRAASNMALGKFRAALRDYE 105 (166)
T ss_dssp CHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 3444467777766654 3467889999999999999999999999988663 4467889999999999999999999999
Q ss_pred HHHhcCCCCChHHHH--HHHHHHHHHcCCHHHHHHHHHHHH
Q 021583 148 KIFLDHLEGTPRIFF--DKMISIYYNRGMHEKMFEIFADME 186 (310)
Q Consensus 148 ~m~~~~~~~~~~~~y--~~li~~~~~~g~~~~a~~l~~~m~ 186 (310)
+..+..- .+...+ -.+...+.+.|++++|.+.+....
T Consensus 106 ~a~~~~p--~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~ 144 (166)
T 1a17_A 106 TVVKVKP--HDKDAKMKYQECNKIVKQKAFERAIAGDEHKR 144 (166)
T ss_dssp HHHHHST--TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCC--CCHHHHHHHHHHHHHHHHHHHHHHHHcccchH
Confidence 9988754 333344 344444778899999999888754
No 111
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=97.99 E-value=0.0003 Score=57.03 Aligned_cols=163 Identities=10% Similarity=0.105 Sum_probs=115.0
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCC-HHHHHH----------------HHHHHHhcCCHHHHHHHHHHHHhcC
Q 021583 91 VKKALKTLENEKDWKRIIQVTKWMLSKGQGRT-MGTYFL----------------LLNALAEDGRLDEAEELWTKIFLDH 153 (310)
Q Consensus 91 ~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~-~~ty~~----------------ll~~~~~~g~~~~A~~~~~~m~~~~ 153 (310)
+-.....+.+.|++++|...|+...+. .|+ ...|.. +-..|.+.|++++|...|++..+..
T Consensus 7 ~~~~g~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 84 (208)
T 3urz_A 7 MLQKVSAAIEAGQNGQAVSYFRQTIAL--NIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKA 84 (208)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH--CHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHh--CCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Confidence 334455677899999999999998765 243 445555 8889999999999999999999875
Q ss_pred CCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhcCC--HHHHHHHHHhCCCCccchhee
Q 021583 154 LEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP-NVSIVSMMGNAFQKLGM--LDKYEKLKKKYPPPKWEYRYI 230 (310)
Q Consensus 154 ~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~li~~~~~~g~--~~~a~~l~~~~~p~~~~~~~~ 230 (310)
|.+...|..+-..|...|++++|.+.|+...+. .| +...|..+..+|...|+ .+.+...++.....
T Consensus 85 --p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~------- 153 (208)
T 3urz_A 85 --PNNVDCLEACAEMQVCRGQEKDALRMYEKILQL--EADNLAANIFLGNYYYLTAEQEKKKLETDYKKLSSP------- 153 (208)
T ss_dssp --TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CC-------
T ss_pred --CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--CCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCC-------
Confidence 345568999999999999999999999998874 45 46888888888876654 34455555442110
Q ss_pred ccCcccCChh-hh-hHhhhccCCChhhHHhhhchhhcCCCCCchh
Q 021583 231 KGKRVRIPAK-PK-YELDSATEGKTNEVETTKNPNESSEEPEAAA 273 (310)
Q Consensus 231 ~~~~~~~~~~-~~-~~li~~~~g~~~~a~~~~~~m~~~~~~p~~~ 273 (310)
.+... .| ..+.....|++++|.+.++..... .|+..
T Consensus 154 -----~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l--~P~~~ 191 (208)
T 3urz_A 154 -----TKMQYARYRDGLSKLFTTRYEKARNSLQKVILR--FPSTE 191 (208)
T ss_dssp -----CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTT--SCCHH
T ss_pred -----CchhHHHHHHHHHHHHccCHHHHHHHHHHHHHh--CCCHH
Confidence 11111 11 122222678899999999877653 36543
No 112
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.99 E-value=0.0033 Score=57.76 Aligned_cols=140 Identities=12% Similarity=-0.054 Sum_probs=94.2
Q ss_pred CcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHh----cCC
Q 021583 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLEN----EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAE----DGR 138 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~----~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~----~g~ 138 (310)
+..++|...+++..+.| +...+..|-..|.. .+++++|.+.|+...+.| +...+..|-..|.. .++
T Consensus 57 ~~~~~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~g~~~~ 130 (490)
T 2xm6_A 57 KDLTQAMDWFRRAAEQG---YTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKG---LPQAQQNLGVMYHEGNGVKVD 130 (490)
T ss_dssp CCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCC
T ss_pred cCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCCC
Confidence 34455566666666654 35566666677776 777788888777776654 55666666666666 677
Q ss_pred HHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHh----cCCH
Q 021583 139 LDEAEELWTKIFLDHLEGTPRIFFDKMISIYYN----RGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK----LGML 210 (310)
Q Consensus 139 ~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~----~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~----~g~~ 210 (310)
.++|.+.|++..+.+. ...+..|-..|.. .++.++|.+.|+...+.| +...+..|-..|.. .++.
T Consensus 131 ~~~A~~~~~~a~~~~~----~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~g~~~~~ 203 (490)
T 2xm6_A 131 KAESVKWFRLAAEQGR----DSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQG---NVWSCNQLGYMYSRGLGVERND 203 (490)
T ss_dssp HHHHHHHHHHHHHTTC----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCH
T ss_pred HHHHHHHHHHHHHCCC----HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhcCCCCCcCH
Confidence 7788887777776643 2355666666665 667777777777776654 56666677777766 6777
Q ss_pred HHHHHHHHh
Q 021583 211 DKYEKLKKK 219 (310)
Q Consensus 211 ~~a~~l~~~ 219 (310)
++|.++|++
T Consensus 204 ~~A~~~~~~ 212 (490)
T 2xm6_A 204 AISAQWYRK 212 (490)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777754
No 113
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=97.98 E-value=9.6e-05 Score=57.97 Aligned_cols=112 Identities=10% Similarity=0.011 Sum_probs=58.7
Q ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH-HHhcCCH--HHHHHHHHH
Q 021583 72 VYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNA-LAEDGRL--DEAEELWTK 148 (310)
Q Consensus 72 ~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~-~~~~g~~--~~A~~~~~~ 148 (310)
+...+++..+.. +.+...|..+-..|...|++++|...|+...+.. ..+...+..+... |...|+. ++|.+.|++
T Consensus 29 A~~~~~~al~~~-p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~ 106 (177)
T 2e2e_A 29 QLQALQDKIRAN-PQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLR-GENAELYAALATVLYYQASQHMTAQTRAMIDK 106 (177)
T ss_dssp CCHHHHHHHHHC-CSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-CSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHhcCCcchHHHHHHHHH
Confidence 344444444333 2344555555556666666666666666554332 1234455555555 4455555 666666665
Q ss_pred HHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 021583 149 IFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEE 187 (310)
Q Consensus 149 m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~ 187 (310)
..+..- .+...|..+...|...|++++|...++...+
T Consensus 107 al~~~p--~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 107 ALALDS--NEITALMLLASDAFMQANYAQAIELWQKVMD 143 (177)
T ss_dssp HHHHCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHhCC--CcHHHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 555432 2233555555556666666666666665554
No 114
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=97.98 E-value=3.4e-05 Score=61.59 Aligned_cols=160 Identities=14% Similarity=0.035 Sum_probs=107.0
Q ss_pred HHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc----CCCCChHHHHHHHHHHHHHcC
Q 021583 98 LENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD----HLEGTPRIFFDKMISIYYNRG 173 (310)
Q Consensus 98 ~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~----~~~~~~~~~y~~li~~~~~~g 173 (310)
....|++++|.++++..... ......++..+-..|...|++++|...+++..+. +..+....+++.+-..|...|
T Consensus 2 ~~~~g~~~~A~~~~~~~~~~-~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g 80 (203)
T 3gw4_A 2 AFEAHDYALAERQAQALLAH-PATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAG 80 (203)
T ss_dssp -----CHHHHHHHHHHHHTS-TTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred ccccccHHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcC
Confidence 34679999999966665432 2245688899999999999999999999987762 221112247899999999999
Q ss_pred CHHHHHHHHHHHHHC----CCCC--CHHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccchheeccCccc-CChhhhhHhh
Q 021583 174 MHEKMFEIFADMEEL----GVRP--NVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVR-IPAKPKYELD 246 (310)
Q Consensus 174 ~~~~a~~l~~~m~~~----g~~p--~~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~~~~~~~~~~-~~~~~~~~li 246 (310)
++++|.+.+++..+. +-.| ....+..+...+...|++++|...+++.... . ...+.. .....+..+-
T Consensus 81 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---~---~~~~~~~~~~~~~~~la 154 (203)
T 3gw4_A 81 NWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVY---A---QQADDQVAIACAFRGLG 154 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH---H---HHTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH---H---HhccchHHHHHHHHHHH
Confidence 999999999887642 2122 2366888899999999999999998762100 0 000000 1122233344
Q ss_pred hc--cCCChhhHHhhhchhh
Q 021583 247 SA--TEGKTNEVETTKNPNE 264 (310)
Q Consensus 247 ~~--~~g~~~~a~~~~~~m~ 264 (310)
.. ..|++++|.+.++...
T Consensus 155 ~~~~~~g~~~~A~~~~~~al 174 (203)
T 3gw4_A 155 DLAQQEKNLLEAQQHWLRAR 174 (203)
T ss_dssp HHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHCcCHHHHHHHHHHHH
Confidence 43 7899999988876543
No 115
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=97.97 E-value=2.9e-05 Score=66.58 Aligned_cols=192 Identities=12% Similarity=0.009 Sum_probs=126.6
Q ss_pred CcHHHHHHHHHHHHHcCCCCC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHHC----CCCC-CHHHHHHHHHHHHhcC
Q 021583 67 NVKEEVYGALDSFIAWELEFP----LITVKKALKTLENEKDWKRIIQVTKWMLSK----GQGR-TMGTYFLLLNALAEDG 137 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~----~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----g~~p-~~~ty~~ll~~~~~~g 137 (310)
+..+.|...+++..+.. +.+ ...+..+...|...|++++|.+.++..... +..| ...++..+...|...|
T Consensus 19 g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g 97 (338)
T 3ro2_A 19 GDCRAGVSFFEAAVQVG-TEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLG 97 (338)
T ss_dssp TCHHHHHHHHHHHHHHC-CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHhhC-cccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHcc
Confidence 34444577777776653 223 367888889999999999999999886532 2222 2567788888999999
Q ss_pred CHHHHHHHHHHHHhcCCCC--Ch--HHHHHHHHHHHHHcCC--------------------HHHHHHHHHHHHHC----C
Q 021583 138 RLDEAEELWTKIFLDHLEG--TP--RIFFDKMISIYYNRGM--------------------HEKMFEIFADMEEL----G 189 (310)
Q Consensus 138 ~~~~A~~~~~~m~~~~~~~--~~--~~~y~~li~~~~~~g~--------------------~~~a~~l~~~m~~~----g 189 (310)
++++|.+.+++..+..-.. .. ..+|..+-..|...|+ +++|.+.+++.... +
T Consensus 98 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~ 177 (338)
T 3ro2_A 98 NFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALG 177 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999998866542110 11 1378888999999999 99999888876432 2
Q ss_pred CCCC-HHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhh
Q 021583 190 VRPN-VSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNE 264 (310)
Q Consensus 190 ~~p~-~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~ 264 (310)
-.|. ..++..+...|...|++++|...+++.... ... ..........+..+... ..|++++|.+.++...
T Consensus 178 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~---~~~--~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 250 (338)
T 3ro2_A 178 DRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLI---AKE--FGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTL 250 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH---HHH--HTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH---HHh--cCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 2222 357888888999999999999998762100 000 00001112233333333 7788888888876553
No 116
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=97.97 E-value=0.00012 Score=51.98 Aligned_cols=95 Identities=8% Similarity=-0.056 Sum_probs=55.0
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCC--hHHHHHHHHH
Q 021583 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT--PRIFFDKMIS 167 (310)
Q Consensus 90 ~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~--~~~~y~~li~ 167 (310)
.+..+...+.+.|++++|...|+...+.. ..+...+..+-..+...|++++|.+.|++..+..- . +...|..+..
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~--~~~~~~~~~~l~~ 84 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQLD-PEESKYWLMKGKALYNLERYEEAVDCYNYVINVIE--DEYNKDVWAAKAD 84 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSC--CTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhC-cCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCc--ccchHHHHHHHHH
Confidence 44455555666666666666666655442 23455556666666666666666666666655432 2 3345666666
Q ss_pred HHHHc-CCHHHHHHHHHHHHH
Q 021583 168 IYYNR-GMHEKMFEIFADMEE 187 (310)
Q Consensus 168 ~~~~~-g~~~~a~~l~~~m~~ 187 (310)
.|.+. |++++|.+.++....
T Consensus 85 ~~~~~~~~~~~A~~~~~~~~~ 105 (112)
T 2kck_A 85 ALRYIEGKEVEAEIAEARAKL 105 (112)
T ss_dssp HHTTCSSCSHHHHHHHHHHGG
T ss_pred HHHHHhCCHHHHHHHHHHHhh
Confidence 66666 666666666666554
No 117
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=97.97 E-value=0.00012 Score=57.30 Aligned_cols=116 Identities=8% Similarity=0.087 Sum_probs=94.1
Q ss_pred HhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHH-HHHcCCH--
Q 021583 99 ENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI-YYNRGMH-- 175 (310)
Q Consensus 99 ~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~-~~~~g~~-- 175 (310)
...|++++|...++...+.. ..+...|..+-..|...|++++|...|++..+..- .+...|..+... |...|++
T Consensus 21 ~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p--~~~~~~~~la~~l~~~~~~~~~ 97 (177)
T 2e2e_A 21 ASQQNPEAQLQALQDKIRAN-PQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRG--ENAELYAALATVLYYQASQHMT 97 (177)
T ss_dssp C-----CCCCHHHHHHHHHC-CSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHC--SCHHHHHHHHHHHHHHTTTCCC
T ss_pred hhccCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHhcCCcch
Confidence 45788999999998877653 45678999999999999999999999999888753 445678888888 7889998
Q ss_pred HHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 176 EKMFEIFADMEELGVRP-NVSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 176 ~~a~~l~~~m~~~g~~p-~~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
++|.+.++...+.. | +...+..+...|...|++++|...|++
T Consensus 98 ~~A~~~~~~al~~~--p~~~~~~~~la~~~~~~g~~~~A~~~~~~ 140 (177)
T 2e2e_A 98 AQTRAMIDKALALD--SNEITALMLLASDAFMQANYAQAIELWQK 140 (177)
T ss_dssp HHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC--CCcHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 99999999988753 4 468888999999999999999999986
No 118
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=97.97 E-value=0.00047 Score=50.63 Aligned_cols=98 Identities=12% Similarity=0.009 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHH
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~ 167 (310)
...+..+-..+.+.|++++|.+.|+...+.. ..+...|..+-..|.+.|++++|.+.|++..+..- .+...|..+-.
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p--~~~~~~~~lg~ 80 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRA-PEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDP--NFVRAYIRKAT 80 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC--CcHHHHHHHHH
Confidence 3456777788889999999999999877653 34678888899999999999999999998888753 44568888899
Q ss_pred HHHHcCCHHHHHHHHHHHHHC
Q 021583 168 IYYNRGMHEKMFEIFADMEEL 188 (310)
Q Consensus 168 ~~~~~g~~~~a~~l~~~m~~~ 188 (310)
.|...|++++|.+.|+...+.
T Consensus 81 ~~~~~~~~~~A~~~~~~al~~ 101 (126)
T 3upv_A 81 AQIAVKEYASALETLDAARTK 101 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHh
Confidence 999999999999999887653
No 119
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=97.96 E-value=0.00015 Score=64.34 Aligned_cols=164 Identities=7% Similarity=-0.026 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHC----CCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc----CCCCCh
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSK----GQGR-TMGTYFLLLNALAEDGRLDEAEELWTKIFLD----HLEGTP 158 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----g~~p-~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~----~~~~~~ 158 (310)
..+++.+-..|...|++++|.+.|+...+. +-.+ ...++..|-..|...|++++|.+.|++..+. +. +..
T Consensus 182 ~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~-~~~ 260 (378)
T 3q15_A 182 IQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVP-DLL 260 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCG-GGH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCC-hhH
Confidence 457888999999999999999999986642 2211 2467888999999999999999999988762 21 233
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHCC----CCCCHHHHHHHHHHHHhcCC---HHHHHHHHHhCCCCccchheec
Q 021583 159 RIFFDKMISIYYNRGMHEKMFEIFADMEELG----VRPNVSIVSMMGNAFQKLGM---LDKYEKLKKKYPPPKWEYRYIK 231 (310)
Q Consensus 159 ~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g----~~p~~~ty~~li~~~~~~g~---~~~a~~l~~~~~p~~~~~~~~~ 231 (310)
..++..+-..|.+.|++++|.+.++...+.. -+.....+..+-..|...|+ +++|...+++....
T Consensus 261 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~ly~~~~~~~~~~~al~~~~~~~~~-------- 332 (378)
T 3q15_A 261 PKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDLLSYFEKKNLH-------- 332 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTCCSCHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHTTCH--------
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhCCCh--------
Confidence 4589999999999999999999999987632 12223566777777778888 88888887762210
Q ss_pred cCcccCChhhhhHhhhc--cCCChhhHHhhhchhh
Q 021583 232 GKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNE 264 (310)
Q Consensus 232 ~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~ 264 (310)
......+..+-.. ..|++++|.++++...
T Consensus 333 ----~~~~~~~~~la~~y~~~g~~~~A~~~~~~al 363 (378)
T 3q15_A 333 ----AYIEACARSAAAVFESSCHFEQAAAFYRKVL 363 (378)
T ss_dssp ----HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ----hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 1111233334444 8999999998886653
No 120
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=97.95 E-value=0.00035 Score=51.90 Aligned_cols=96 Identities=11% Similarity=0.069 Sum_probs=84.3
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHH
Q 021583 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMM 200 (310)
Q Consensus 121 p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~l 200 (310)
.+...|..+-..+...|++++|...|++..+..- .+...|..+-..|...|++++|...++...+.. +-+...|..+
T Consensus 7 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~--~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~l 83 (137)
T 3q49_B 7 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRNP--LVAVYYTNRALCYLKMQQPEQALADCRRALELD-GQSVKAHFFL 83 (137)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCc--CcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-chhHHHHHHH
Confidence 4678899999999999999999999999888753 455689999999999999999999999988754 2257889999
Q ss_pred HHHHHhcCCHHHHHHHHHh
Q 021583 201 GNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 201 i~~~~~~g~~~~a~~l~~~ 219 (310)
..+|...|++++|...|++
T Consensus 84 ~~~~~~~~~~~~A~~~~~~ 102 (137)
T 3q49_B 84 GQCQLEMESYDEAIANLQR 102 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHH
Confidence 9999999999999999876
No 121
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=97.95 E-value=0.0005 Score=57.49 Aligned_cols=166 Identities=11% Similarity=0.001 Sum_probs=121.2
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC-ChHHH
Q 021583 86 FPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRT---MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEG-TPRIF 161 (310)
Q Consensus 86 p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~---~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~-~~~~~ 161 (310)
.+...+-.+-..+.+.|++++|...|+...+.. +-+ ...+..+-..|.+.|++++|...|++..+..-.. .....
T Consensus 13 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 91 (261)
T 3qky_A 13 SSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYG-RTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQA 91 (261)
T ss_dssp SSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGC-SCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHH
T ss_pred CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-CCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHH
Confidence 356677778888899999999999999988653 112 6788889999999999999999999999874311 22346
Q ss_pred HHHHHHHHHH--------cCCHHHHHHHHHHHHHCCCCCCH-HHH-----------------HHHHHHHHhcCCHHHHHH
Q 021583 162 FDKMISIYYN--------RGMHEKMFEIFADMEELGVRPNV-SIV-----------------SMMGNAFQKLGMLDKYEK 215 (310)
Q Consensus 162 y~~li~~~~~--------~g~~~~a~~l~~~m~~~g~~p~~-~ty-----------------~~li~~~~~~g~~~~a~~ 215 (310)
|..+-.+|.. .|++++|.+.|+...+.. |+. ... ..+..+|.+.|++++|..
T Consensus 92 ~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~--p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 169 (261)
T 3qky_A 92 EYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRY--PNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAV 169 (261)
T ss_dssp HHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHC--TTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHC--cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHH
Confidence 7788888888 999999999999988743 432 222 456788999999999999
Q ss_pred HHHhC---CCCccchheeccCcccCChhhhhHhhhc--c----------CCChhhHHhhhchhhc
Q 021583 216 LKKKY---PPPKWEYRYIKGKRVRIPAKPKYELDSA--T----------EGKTNEVETTKNPNES 265 (310)
Q Consensus 216 l~~~~---~p~~~~~~~~~~~~~~~~~~~~~~li~~--~----------~g~~~~a~~~~~~m~~ 265 (310)
.|++. .|+... ....+..+..+ . .|++++|.+.++....
T Consensus 170 ~~~~~l~~~p~~~~-----------~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~ 223 (261)
T 3qky_A 170 TYEAVFDAYPDTPW-----------ADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQ 223 (261)
T ss_dssp HHHHHHHHCTTSTT-----------HHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCch-----------HHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHH
Confidence 98773 233110 11122222222 2 2888999999987765
No 122
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.93 E-value=0.00073 Score=50.53 Aligned_cols=99 Identities=11% Similarity=-0.086 Sum_probs=83.3
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHH
Q 021583 86 FPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRT----MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161 (310)
Q Consensus 86 p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~----~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~ 161 (310)
.+...+..+...+.+.|++++|.+.|+...+. .|+ ...|..+...|...|++++|.+.+++..+..- .+...
T Consensus 26 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~--~~~~~ 101 (148)
T 2dba_A 26 SSVEQLRKEGNELFKCGDYGGALAAYTQALGL--DATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDG--GDVKA 101 (148)
T ss_dssp CCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTS--CCHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH--cccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCc--cCHHH
Confidence 35677888888999999999999999998765 466 67888888899999999999999999887643 34567
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 021583 162 FDKMISIYYNRGMHEKMFEIFADMEEL 188 (310)
Q Consensus 162 y~~li~~~~~~g~~~~a~~l~~~m~~~ 188 (310)
|..+-..|...|++++|.+.|+...+.
T Consensus 102 ~~~~a~~~~~~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 102 LYRRSQALEKLGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 888889999999999999999988764
No 123
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=97.93 E-value=0.00028 Score=54.06 Aligned_cols=97 Identities=9% Similarity=-0.092 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHH
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~ 167 (310)
...+..+-..+.+.|++++|...|+...... ..+...|..+-..|...|++++|.+.|++..+..- .+...|..+-.
T Consensus 21 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p--~~~~~~~~lg~ 97 (148)
T 2vgx_A 21 LEQLYSLAFNQYQSGXYEDAHXVFQALCVLD-HYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDI--XEPRFPFHAAE 97 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST--TCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHcC-cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC--CCchHHHHHHH
Confidence 4556667777888888888888888877552 34677777888888888888888888888877642 34457778888
Q ss_pred HHHHcCCHHHHHHHHHHHHH
Q 021583 168 IYYNRGMHEKMFEIFADMEE 187 (310)
Q Consensus 168 ~~~~~g~~~~a~~l~~~m~~ 187 (310)
+|...|++++|.+.|+...+
T Consensus 98 ~~~~~g~~~~A~~~~~~al~ 117 (148)
T 2vgx_A 98 CLLQXGELAEAESGLFLAQE 117 (148)
T ss_dssp HHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHH
Confidence 88888888888888888765
No 124
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.92 E-value=0.0052 Score=56.42 Aligned_cols=141 Identities=7% Similarity=-0.094 Sum_probs=111.3
Q ss_pred CCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHh----cC
Q 021583 66 SNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN----EKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAE----DG 137 (310)
Q Consensus 66 ~~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~----~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~----~g 137 (310)
....+++...+++..+.| +...+..|-..|.. .+++++|.+.|+...+.| +...+..|-..|.. .+
T Consensus 92 ~~~~~~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~g~~~ 165 (490)
T 2xm6_A 92 PQDYAQAVIWYKKAALKG---LPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQG---RDSGQQSMGDAYFEGDGVTR 165 (490)
T ss_dssp CCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCC
T ss_pred CCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCC
Confidence 455677788888877765 46677777778877 789999999999988776 56777778777877 78
Q ss_pred CHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHh----cCC
Q 021583 138 RLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYN----RGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK----LGM 209 (310)
Q Consensus 138 ~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~----~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~----~g~ 209 (310)
+.++|.+.|++..+.+. ...+..|-..|.+ .++.++|.+.|+...+.| +...+..|...|.. .++
T Consensus 166 d~~~A~~~~~~a~~~~~----~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~y~~g~g~~~~ 238 (490)
T 2xm6_A 166 DYVMAREWYSKAAEQGN----VWSCNQLGYMYSRGLGVERNDAISAQWYRKSATSG---DELGQLHLADMYYFGIGVTQD 238 (490)
T ss_dssp CHHHHHHHHHHHHHTTC----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCC
T ss_pred CHHHHHHHHHHHHHCCC----HHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCCC
Confidence 89999999998888653 3567778788887 889999999999887754 56677777777776 788
Q ss_pred HHHHHHHHHh
Q 021583 210 LDKYEKLKKK 219 (310)
Q Consensus 210 ~~~a~~l~~~ 219 (310)
.++|.++|++
T Consensus 239 ~~~A~~~~~~ 248 (490)
T 2xm6_A 239 YTQSRVLFSQ 248 (490)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999888876
No 125
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=97.92 E-value=0.00039 Score=56.98 Aligned_cols=167 Identities=9% Similarity=0.010 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCC-CCCC-HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChH-HHHHH
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKG-QGRT-MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR-IFFDK 164 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g-~~p~-~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~-~~y~~ 164 (310)
...+-.+...+.+.|++++|...|+.+.+.. -.|. ...+..+..+|.+.|++++|.+.|++..+..-..+.. ..+-.
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~ 83 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYM 83 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHH
Confidence 4455566677888999999999999988642 1222 4577788899999999999999999988764321211 13444
Q ss_pred HHHHHHH------------------cCCHHHHHHHHHHHHHCCCCCCH-HHH-----------------HHHHHHHHhcC
Q 021583 165 MISIYYN------------------RGMHEKMFEIFADMEELGVRPNV-SIV-----------------SMMGNAFQKLG 208 (310)
Q Consensus 165 li~~~~~------------------~g~~~~a~~l~~~m~~~g~~p~~-~ty-----------------~~li~~~~~~g 208 (310)
+-.+|.. .|+.++|.+.|+...+. -|+. ..+ -.+...|.+.|
T Consensus 84 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~--~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~ 161 (225)
T 2yhc_A 84 RGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRG--YPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERG 161 (225)
T ss_dssp HHHHHHHHHC--------------CCHHHHHHHHHHHHHHTT--CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHH--CcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4444443 57899999999998864 2442 122 24556788999
Q ss_pred CHHHHHHHHHhC---CCCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhcCC
Q 021583 209 MLDKYEKLKKKY---PPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNESSE 267 (310)
Q Consensus 209 ~~~~a~~l~~~~---~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~~~ 267 (310)
++++|...|+++ .|+.. .....+..+..+ ..|+.++|.+.++.+...+
T Consensus 162 ~~~~A~~~~~~~l~~~p~~~-----------~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~~ 214 (225)
T 2yhc_A 162 AWVAVVNRVEGMLRDYPDTQ-----------ATRDALPLMENAYRQMQMNAQAEKVAKIIAANS 214 (225)
T ss_dssp CHHHHHHHHHHHHHHSTTSH-----------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCC
T ss_pred cHHHHHHHHHHHHHHCcCCC-----------ccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhC
Confidence 999999998763 23211 011233444445 8999999999998776543
No 126
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=97.92 E-value=0.00021 Score=52.44 Aligned_cols=97 Identities=9% Similarity=-0.019 Sum_probs=83.8
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHH
Q 021583 120 GRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSM 199 (310)
Q Consensus 120 ~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~ 199 (310)
..+...+..+...+...|++++|.+.|++..+..- .+...|..+...|...|++++|.+.++...+.. ..+...+..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~--~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~ 89 (133)
T 2lni_A 13 PDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNP--KDAKLYSNRAACYTKLLEFQLALKDCEECIQLE-PTFIKGYTR 89 (133)
T ss_dssp SCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCT--TCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHC-TTCHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CCchHHHHH
Confidence 34578888999999999999999999999987643 455689999999999999999999999988753 235788999
Q ss_pred HHHHHHhcCCHHHHHHHHHh
Q 021583 200 MGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 200 li~~~~~~g~~~~a~~l~~~ 219 (310)
+..+|...|++++|.+.|++
T Consensus 90 la~~~~~~~~~~~A~~~~~~ 109 (133)
T 2lni_A 90 KAAALEAMKDYTKAMDVYQK 109 (133)
T ss_dssp HHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHH
Confidence 99999999999999999876
No 127
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=97.92 E-value=0.00051 Score=54.94 Aligned_cols=122 Identities=15% Similarity=0.055 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHCCC-CC---C-----------HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC
Q 021583 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQ-GR---T-----------MGTYFLLLNALAEDGRLDEAEELWTKIFLDH 153 (310)
Q Consensus 89 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~-~p---~-----------~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~ 153 (310)
..+..+-..+.+.|++++|.+.|+......- .| . ...|..+-..|.+.|++++|...+++..+..
T Consensus 39 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~ 118 (198)
T 2fbn_A 39 FDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKID 118 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 4566777788899999999999999876421 12 1 3788889999999999999999999998874
Q ss_pred CCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhcCCHHHHH
Q 021583 154 LEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP-NVSIVSMMGNAFQKLGMLDKYE 214 (310)
Q Consensus 154 ~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~li~~~~~~g~~~~a~ 214 (310)
- .+...|..+-.+|...|++++|.+.|+...+. .| +...+..+..++...++.+++.
T Consensus 119 p--~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~l~~~~~~~~~~~~~~ 176 (198)
T 2fbn_A 119 K--NNVKALYKLGVANMYFGFLEEAKENLYKAASL--NPNNLDIRNSYELCVNKLKEARKKD 176 (198)
T ss_dssp T--TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--STTCHHHHHHHHHHHHHHHHHHC--
T ss_pred c--ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHH--CCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 3 45568999999999999999999999998764 34 5677888888888887777765
No 128
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=97.91 E-value=0.00033 Score=52.91 Aligned_cols=98 Identities=10% Similarity=-0.033 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHH
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~ 167 (310)
...+..+-..+.+.|++++|...|+...... +.+...|..+-..|.+.|++++|...|++..+..- .+...|..+-.
T Consensus 18 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p--~~~~~~~~lg~ 94 (142)
T 2xcb_A 18 LEQLYALGFNQYQAGKWDDAQKIFQALCMLD-HYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI--NEPRFPFHAAE 94 (142)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC--CCcHHHHHHHH
Confidence 3455566677788888888888888877552 34677778888888888888888888888887643 34457778888
Q ss_pred HHHHcCCHHHHHHHHHHHHHC
Q 021583 168 IYYNRGMHEKMFEIFADMEEL 188 (310)
Q Consensus 168 ~~~~~g~~~~a~~l~~~m~~~ 188 (310)
+|...|++++|.+.|+...+.
T Consensus 95 ~~~~~g~~~~A~~~~~~al~~ 115 (142)
T 2xcb_A 95 CHLQLGDLDGAESGFYSARAL 115 (142)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHh
Confidence 888888888888888887653
No 129
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=97.91 E-value=7e-05 Score=64.12 Aligned_cols=132 Identities=17% Similarity=0.051 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCC-CCC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC--CCh--
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQ-GRT----MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLE--GTP-- 158 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~-~p~----~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~--~~~-- 158 (310)
...+..+...|...|++++|.+.++...+..- .++ ..++..+...|...|++++|.+.+++..+..-. ...
T Consensus 183 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 262 (338)
T 3ro2_A 183 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 262 (338)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHH
Confidence 45788888999999999999999998763311 112 347888999999999999999999987654211 011
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHC----CCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 159 RIFFDKMISIYYNRGMHEKMFEIFADMEEL----GVRPN-VSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 159 ~~~y~~li~~~~~~g~~~~a~~l~~~m~~~----g~~p~-~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
..++..+...|...|++++|.+.+++..+. +-.+. ..++..+...|.+.|++++|.+.+++
T Consensus 263 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 328 (338)
T 3ro2_A 263 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEK 328 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 247888999999999999999999987642 21121 46788899999999999999999876
No 130
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=97.90 E-value=0.0013 Score=53.71 Aligned_cols=149 Identities=11% Similarity=0.039 Sum_probs=106.7
Q ss_pred cHHHHHHHHHHHHHcCC-CC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCC-CCCCH-HHHHHHHHHHHh--------
Q 021583 68 VKEEVYGALDSFIAWEL-EF-PLITVKKALKTLENEKDWKRIIQVTKWMLSKG-QGRTM-GTYFLLLNALAE-------- 135 (310)
Q Consensus 68 ~~~~~~~~~~~m~~~~~-~p-~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g-~~p~~-~ty~~ll~~~~~-------- 135 (310)
..+.|...|+++.+..- .| ....+..+..+|.+.|++++|...|+...+.. -.+.. .++-.+-..+..
T Consensus 19 ~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~ 98 (225)
T 2yhc_A 19 NWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQG 98 (225)
T ss_dssp CHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC-----
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhh
Confidence 34444778888776532 12 24678888999999999999999999988652 12221 234334444433
Q ss_pred ----------cCCHHHHHHHHHHHHhcCCCCChHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHHC
Q 021583 136 ----------DGRLDEAEELWTKIFLDHLEGTPRIFF-----------------DKMISIYYNRGMHEKMFEIFADMEEL 188 (310)
Q Consensus 136 ----------~g~~~~A~~~~~~m~~~~~~~~~~~~y-----------------~~li~~~~~~g~~~~a~~l~~~m~~~ 188 (310)
.|+.++|...|+++.+..- .+...+ -.+-..|.+.|++++|...|+.+.+.
T Consensus 99 ~~~~~~~~~~~~~~~~A~~~~~~~l~~~P--~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~ 176 (225)
T 2yhc_A 99 FFGVDRSDRDPQQARAAFSDFSKLVRGYP--NSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRD 176 (225)
T ss_dssp ---------CCHHHHHHHHHHHHHHTTCT--TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hhccchhhcCcHHHHHHHHHHHHHHHHCc--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 5789999999999998642 222233 23455788999999999999999874
Q ss_pred CCCCCH----HHHHHHHHHHHhcCCHHHHHHHHHhC
Q 021583 189 GVRPNV----SIVSMMGNAFQKLGMLDKYEKLKKKY 220 (310)
Q Consensus 189 g~~p~~----~ty~~li~~~~~~g~~~~a~~l~~~~ 220 (310)
. |+. ..+..+..+|.+.|+.++|.+.++.+
T Consensus 177 ~--p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l 210 (225)
T 2yhc_A 177 Y--PDTQATRDALPLMENAYRQMQMNAQAEKVAKII 210 (225)
T ss_dssp S--TTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred C--cCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 2 442 56888999999999999999998763
No 131
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=97.90 E-value=0.00046 Score=56.13 Aligned_cols=178 Identities=10% Similarity=-0.065 Sum_probs=129.4
Q ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcC----CHHHHHHHHH
Q 021583 72 VYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDG----RLDEAEELWT 147 (310)
Q Consensus 72 ~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g----~~~~A~~~~~ 147 (310)
+...|++..+.| +..++..|-..|...+++++|.+.|+...+.| +...+..|-..|.. + +.++|.+.|+
T Consensus 5 A~~~~~~aa~~g---~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g---~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~ 77 (212)
T 3rjv_A 5 PGSQYQQQAEAG---DRRAQYYLADTWVSSGDYQKAEYWAQKAAAQG---DGDALALLAQLKIR-NPQQADYPQARQLAE 77 (212)
T ss_dssp TTHHHHHHHHTT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT---CHHHHHHHHHHTTS-STTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHCC---CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHc-CCCCCCHHHHHHHHH
Confidence 356666666654 57888888889999999999999999988876 56777778777877 6 8999999999
Q ss_pred HHHhcCCCCChHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHh----cCCHHHHHHHHH
Q 021583 148 KIFLDHLEGTPRIFFDKMISIYYN----RGMHEKMFEIFADMEELGVR-PNVSIVSMMGNAFQK----LGMLDKYEKLKK 218 (310)
Q Consensus 148 ~m~~~~~~~~~~~~y~~li~~~~~----~g~~~~a~~l~~~m~~~g~~-p~~~ty~~li~~~~~----~g~~~~a~~l~~ 218 (310)
+..+.+. ...+..|-..|.. .++.++|++.|+...+.|.. -+...+..|-..|.. .++.++|.++|+
T Consensus 78 ~A~~~g~----~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~ 153 (212)
T 3rjv_A 78 KAVEAGS----KSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFK 153 (212)
T ss_dssp HHHHTTC----HHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHH
T ss_pred HHHHCCC----HHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHH
Confidence 9987764 2467777777776 88999999999998876532 026778888888888 889999999987
Q ss_pred hCCCCccchheeccCcccCChhhhhHhhhc---cCC-----ChhhHHhhhchhhcCCCCCch
Q 021583 219 KYPPPKWEYRYIKGKRVRIPAKPKYELDSA---TEG-----KTNEVETTKNPNESSEEPEAA 272 (310)
Q Consensus 219 ~~~p~~~~~~~~~~~~~~~~~~~~~~li~~---~~g-----~~~~a~~~~~~m~~~~~~p~~ 272 (310)
+-. .. ..+...+..|-.. ..| +.++|.++++.-...|.+...
T Consensus 154 ~A~----------~~--~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~~~A~ 203 (212)
T 3rjv_A 154 GSS----------SL--SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFDTGC 203 (212)
T ss_dssp HHH----------HT--SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTCHHHH
T ss_pred HHH----------Hc--CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 621 00 0111122222222 223 788888888777666654433
No 132
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.89 E-value=0.00049 Score=70.25 Aligned_cols=192 Identities=16% Similarity=0.180 Sum_probs=109.6
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHH
Q 021583 87 PLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMI 166 (310)
Q Consensus 87 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li 166 (310)
|...|.-++.+|.+.|++++|.+.+..-++.. ++....+.+..+|++.+++++.+.+. + .++...|..+-
T Consensus 1133 D~say~eVa~~~~~lGkyEEAIeyL~mArk~~--~e~~Idt~LafaYAKl~rleele~fI----~----~~n~ad~~~iG 1202 (1630)
T 1xi4_A 1133 DPSSYMEVVQAANTSGNWEELVKYLQMARKKA--RESYVETELIFALAKTNRLAELEEFI----N----GPNNAHIQQVG 1202 (1630)
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhc--ccccccHHHHHHHHhhcCHHHHHHHH----h----CCCHHHHHHHH
Confidence 34555566666666666666666665544432 33233334666666666665433332 1 12334555666
Q ss_pred HHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhCC-CCccc-----------hheeccC-
Q 021583 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYP-PPKWE-----------YRYIKGK- 233 (310)
Q Consensus 167 ~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~~-p~~~~-----------~~~~~~~- 233 (310)
..|...|++++|..+|... ..|..+..+|.+.|++++|.+.+++-. +..|. |......
T Consensus 1203 d~le~eg~YeeA~~~Y~kA---------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~LA~~cg 1273 (1630)
T 1xi4_A 1203 DRCYDEKMYDAAKLLYNNV---------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCG 1273 (1630)
T ss_pred HHHHhcCCHHHHHHHHHhh---------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 7777777777777777773 478888888999999999988887632 22111 1111111
Q ss_pred -cccCChhhhhHhhhc--cCCChhhHHhhhchhhcCCCCCchhhhhhhh-hhhhhhhHHHHHHhhhccc
Q 021583 234 -RVRIPAKPKYELDSA--TEGKTNEVETTKNPNESSEEPEAAANLNESL-EETEANTKELLEEADAISN 298 (310)
Q Consensus 234 -~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll-~~~~~~~~~l~~~a~~~~~ 298 (310)
++..+...+..++.. +.|.+++|..+++.-...+ +-....|..+- -...-..+.+.+.+....-
T Consensus 1274 l~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~Le-raH~gmftELaiLyaKy~peklmEhlk~f~~ 1341 (1630)
T 1xi4_A 1274 LHIVVHADELEELINYYQDRGYFEELITMLEAALGLE-RAHMGMFTELAILYSKFKPQKMREHLELFWS 1341 (1630)
T ss_pred HhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccC-hhHhHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 233455556666666 8999999999986665443 22333343333 2222244455555555443
No 133
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=97.88 E-value=0.00026 Score=54.18 Aligned_cols=94 Identities=11% Similarity=0.063 Sum_probs=81.1
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHH
Q 021583 122 TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP-NVSIVSMM 200 (310)
Q Consensus 122 ~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~l 200 (310)
+...+..+-..+...|++++|...|++..+..- .+...|..+-.+|...|++++|.+.|+...+.. | +...|..+
T Consensus 20 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p--~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~--p~~~~~~~~l 95 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDH--YDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMD--IXEPRFPFHA 95 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--TTCTHHHHHH
T ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCc--ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC--CCCchHHHHH
Confidence 345677788899999999999999999988753 455689999999999999999999999988743 5 46888899
Q ss_pred HHHHHhcCCHHHHHHHHHh
Q 021583 201 GNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 201 i~~~~~~g~~~~a~~l~~~ 219 (310)
..+|...|++++|...|++
T Consensus 96 g~~~~~~g~~~~A~~~~~~ 114 (148)
T 2vgx_A 96 AECLLQXGELAEAESGLFL 114 (148)
T ss_dssp HHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHH
Confidence 9999999999999999876
No 134
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=97.88 E-value=0.00043 Score=49.39 Aligned_cols=95 Identities=13% Similarity=0.097 Sum_probs=81.5
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q 021583 122 TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMG 201 (310)
Q Consensus 122 ~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li 201 (310)
+...+..+...+...|++++|.+.|++..+..- .+...|..+...|...|++++|...++...+.. +.+...+..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~--~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a 79 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDP--HNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLK-PDWGKGYSRKA 79 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCC--CcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhC-cccHHHHHHHH
Confidence 356778888999999999999999999988753 445689999999999999999999999988753 22578899999
Q ss_pred HHHHhcCCHHHHHHHHHh
Q 021583 202 NAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 202 ~~~~~~g~~~~a~~l~~~ 219 (310)
.+|...|++++|.+.+++
T Consensus 80 ~~~~~~~~~~~A~~~~~~ 97 (118)
T 1elw_A 80 AALEFLNRFEEAKRTYEE 97 (118)
T ss_dssp HHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHH
Confidence 999999999999999876
No 135
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=97.86 E-value=4.6e-05 Score=68.03 Aligned_cols=170 Identities=12% Similarity=0.036 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCH----HHHHHHHHHHHhcCCHHHHHHHHHHHHhc----CCCCChHH
Q 021583 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTM----GTYFLLLNALAEDGRLDEAEELWTKIFLD----HLEGTPRI 160 (310)
Q Consensus 89 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~----~ty~~ll~~~~~~g~~~~A~~~~~~m~~~----~~~~~~~~ 160 (310)
..+..+-..+...|++++|...|+...+.+- .+. ..|..+...|...|++++|.+.|++..+. +..+....
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 127 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQAGT-EDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAK 127 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-SCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHhcc-cChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHH
Confidence 4455667788999999999999999887632 232 57888999999999999999999987654 11112224
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHC----CCCC-CHHHHHHHHHHHHhcCC-----------------HHHHHHHHH
Q 021583 161 FFDKMISIYYNRGMHEKMFEIFADMEEL----GVRP-NVSIVSMMGNAFQKLGM-----------------LDKYEKLKK 218 (310)
Q Consensus 161 ~y~~li~~~~~~g~~~~a~~l~~~m~~~----g~~p-~~~ty~~li~~~~~~g~-----------------~~~a~~l~~ 218 (310)
+|..+-..|...|++++|.+.+++..+. +-.| ...+|..+...|...|+ +++|.+.++
T Consensus 128 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~ 207 (411)
T 4a1s_A 128 SSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQ 207 (411)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHH
Confidence 8999999999999999999999987643 2122 24688899999999999 999988886
Q ss_pred hCCCCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhh
Q 021583 219 KYPPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNE 264 (310)
Q Consensus 219 ~~~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~ 264 (310)
+... ..... .........+..+-.. ..|++++|.++++...
T Consensus 208 ~al~---~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 250 (411)
T 4a1s_A 208 ENLK---LMRDL--GDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERL 250 (411)
T ss_dssp HHHH---HHHHH--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHH---HHHHc--CCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Confidence 5210 00000 0001122344444444 8999999999987654
No 136
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=97.86 E-value=0.00045 Score=50.75 Aligned_cols=93 Identities=8% Similarity=-0.116 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHH
Q 021583 123 MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP-NVSIVSMMG 201 (310)
Q Consensus 123 ~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~li 201 (310)
...+..+-..+.+.|++++|.+.|++..+..- .+...|..+-.+|.+.|++++|++.++...+.. | +...|..+.
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p--~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~lg 79 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAP--EDARGYSNRAAALAKLMSFPEAIADCNKAIEKD--PNFVRAYIRKA 79 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC--CChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--CCcHHHHHHHH
Confidence 45677788889999999999999999988753 455789999999999999999999999988753 4 578899999
Q ss_pred HHHHhcCCHHHHHHHHHh
Q 021583 202 NAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 202 ~~~~~~g~~~~a~~l~~~ 219 (310)
.+|...|++++|...|++
T Consensus 80 ~~~~~~~~~~~A~~~~~~ 97 (126)
T 3upv_A 80 TAQIAVKEYASALETLDA 97 (126)
T ss_dssp HHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHhCHHHHHHHHHH
Confidence 999999999999999876
No 137
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=97.85 E-value=0.00037 Score=53.95 Aligned_cols=94 Identities=18% Similarity=0.099 Sum_probs=83.1
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHH
Q 021583 122 TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP-NVSIVSMM 200 (310)
Q Consensus 122 ~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~l 200 (310)
+...+..+-..|.+.|++++|.+.|++..+..- .+...|..+-..|.+.|++++|++.|+...+.. | +...|..+
T Consensus 10 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p--~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~l 85 (164)
T 3sz7_A 10 ESDKLKSEGNAAMARKEYSKAIDLYTQALSIAP--ANPIYLSNRAAAYSASGQHEKAAEDAELATVVD--PKYSKAWSRL 85 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--cCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--CCCHHHHHHH
Confidence 456788888999999999999999999998753 455689999999999999999999999988753 4 57899999
Q ss_pred HHHHHhcCCHHHHHHHHHh
Q 021583 201 GNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 201 i~~~~~~g~~~~a~~l~~~ 219 (310)
..+|...|++++|...|++
T Consensus 86 g~~~~~~g~~~~A~~~~~~ 104 (164)
T 3sz7_A 86 GLARFDMADYKGAKEAYEK 104 (164)
T ss_dssp HHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHH
Confidence 9999999999999999876
No 138
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=97.84 E-value=0.00018 Score=51.02 Aligned_cols=95 Identities=14% Similarity=0.102 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCC-CCHHHHHHHH
Q 021583 123 MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVR-PNVSIVSMMG 201 (310)
Q Consensus 123 ~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~-p~~~ty~~li 201 (310)
...+..+...+...|++++|...|++..+..- .+...|..+-..|...|++++|.+.++...+..-. .+...+..+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~--~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~ 83 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQLDP--EESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKA 83 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCc--CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHH
Confidence 45567788889999999999999999988753 45568999999999999999999999998875311 1478899999
Q ss_pred HHHHhc-CCHHHHHHHHHh
Q 021583 202 NAFQKL-GMLDKYEKLKKK 219 (310)
Q Consensus 202 ~~~~~~-g~~~~a~~l~~~ 219 (310)
.+|... |++++|.+.+++
T Consensus 84 ~~~~~~~~~~~~A~~~~~~ 102 (112)
T 2kck_A 84 DALRYIEGKEVEAEIAEAR 102 (112)
T ss_dssp HHHTTCSSCSHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHH
Confidence 999999 999999999876
No 139
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=97.84 E-value=0.0005 Score=49.97 Aligned_cols=95 Identities=13% Similarity=0.022 Sum_probs=81.8
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q 021583 122 TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMG 201 (310)
Q Consensus 122 ~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li 201 (310)
+...+..+...+...|++++|.+.|++..+..- .+...|..+...|...|++++|.+.++...+.. +.+...+..+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~--~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~~ 87 (131)
T 2vyi_A 11 EAERLKTEGNEQMKVENFEAAVHFYGKAIELNP--ANAVYFCNRAAAYSKLGNYAGAVQDCERAICID-PAYSKAYGRMG 87 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcC-ccCHHHHHHHH
Confidence 456778888999999999999999999988753 445689999999999999999999999988753 23578899999
Q ss_pred HHHHhcCCHHHHHHHHHh
Q 021583 202 NAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 202 ~~~~~~g~~~~a~~l~~~ 219 (310)
.+|...|++++|...|++
T Consensus 88 ~~~~~~~~~~~A~~~~~~ 105 (131)
T 2vyi_A 88 LALSSLNKHVEAVAYYKK 105 (131)
T ss_dssp HHHHHTTCHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHH
Confidence 999999999999999876
No 140
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=97.84 E-value=0.00022 Score=56.08 Aligned_cols=155 Identities=12% Similarity=0.123 Sum_probs=109.4
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHH--
Q 021583 91 VKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI-- 168 (310)
Q Consensus 91 ~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~-- 168 (310)
+..+...+.+.|++++|...|+...+.. +-+...+..+-..|...|++++|+..|++..+.. | +.. +..+...
T Consensus 9 ~~~~a~~~~~~g~~~~A~~~~~~al~~~-P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~--p-~~~-~~~~~~~~~ 83 (176)
T 2r5s_A 9 LLKQVSELLQQGEHAQALNVIQTLSDEL-QSRGDVKLAKADCLLETKQFELAQELLATIPLEY--Q-DNS-YKSLIAKLE 83 (176)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSCHHH-HTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGG--C-CHH-HHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhcc--C-ChH-HHHHHHHHH
Confidence 4456677889999999999999866431 3457888999999999999999999999887653 2 222 2222221
Q ss_pred HHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHhC---CCCccchheeccCcccCChhhhhH
Q 021583 169 YYNRGMHEKMFEIFADMEELGVRP-NVSIVSMMGNAFQKLGMLDKYEKLKKKY---PPPKWEYRYIKGKRVRIPAKPKYE 244 (310)
Q Consensus 169 ~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~li~~~~~~g~~~~a~~l~~~~---~p~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
+...+...+|.+.++...+. .| +...+..+..+|...|++++|...|++. .|+ ..+...+..
T Consensus 84 ~~~~~~~~~a~~~~~~al~~--~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~------------~~~~~a~~~ 149 (176)
T 2r5s_A 84 LHQQAAESPELKRLEQELAA--NPDNFELACELAVQYNQVGRDEEALELLWNILKVNLG------------AQDGEVKKT 149 (176)
T ss_dssp HHHHHTSCHHHHHHHHHHHH--STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT------------TTTTHHHHH
T ss_pred HHhhcccchHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcc------------cChHHHHHH
Confidence 22333444577888887763 46 4788999999999999999999998763 222 122345555
Q ss_pred hhhc--cCCChhhHHhhhchhh
Q 021583 245 LDSA--TEGKTNEVETTKNPNE 264 (310)
Q Consensus 245 li~~--~~g~~~~a~~~~~~m~ 264 (310)
+... ..|+.++|...+++..
T Consensus 150 l~~~~~~~g~~~~A~~~y~~al 171 (176)
T 2r5s_A 150 FMDILSALGQGNAIASKYRRQL 171 (176)
T ss_dssp HHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHHHHhCCCCcHHHHHHHHH
Confidence 5555 7888888887776543
No 141
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.83 E-value=0.00013 Score=67.54 Aligned_cols=124 Identities=13% Similarity=0.098 Sum_probs=96.1
Q ss_pred HHHHhcCCHHHHHHHHHHHHHC---CCCC----CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc-----CCCCChH-HHH
Q 021583 96 KTLENEKDWKRIIQVTKWMLSK---GQGR----TMGTYFLLLNALAEDGRLDEAEELWTKIFLD-----HLEGTPR-IFF 162 (310)
Q Consensus 96 ~~~~~~~~~~~a~~~~~~m~~~---g~~p----~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~-----~~~~~~~-~~y 162 (310)
..+..+|++++|..++++..+. -+.| ...+++.|..+|...|++++|+.++++..+. |-.+++. .++
T Consensus 317 ~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l 396 (490)
T 3n71_A 317 DKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAV 396 (490)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 3466889999999999886633 1222 3588999999999999999999999886644 5444444 389
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH-----CCCC-CCH-HHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 163 DKMISIYYNRGMHEKMFEIFADMEE-----LGVR-PNV-SIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 163 ~~li~~~~~~g~~~~a~~l~~~m~~-----~g~~-p~~-~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
+.|-..|...|++++|+.++++..+ .|-. |++ .+.+.|-.++...++.++|+.+|++
T Consensus 397 ~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~ 460 (490)
T 3n71_A 397 MRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHK 460 (490)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988653 2321 332 5567777888899999999999865
No 142
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=97.83 E-value=0.00038 Score=52.60 Aligned_cols=94 Identities=13% Similarity=0.121 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q 021583 123 MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGN 202 (310)
Q Consensus 123 ~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~ 202 (310)
...+..+-..+.+.|++++|...|++..+..- .+...|..+-..|.+.|++++|...|+...+.. +-+...|..+..
T Consensus 18 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p--~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~ 94 (142)
T 2xcb_A 18 LEQLYALGFNQYQAGKWDDAQKIFQALCMLDH--YDARYFLGLGACRQSLGLYEQALQSYSYGALMD-INEPRFPFHAAE 94 (142)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHhCC--ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC-CCCcHHHHHHHH
Confidence 34556677788999999999999999988753 455689999999999999999999999988753 224678889999
Q ss_pred HHHhcCCHHHHHHHHHh
Q 021583 203 AFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 203 ~~~~~g~~~~a~~l~~~ 219 (310)
+|...|++++|...|++
T Consensus 95 ~~~~~g~~~~A~~~~~~ 111 (142)
T 2xcb_A 95 CHLQLGDLDGAESGFYS 111 (142)
T ss_dssp HHHHTTCHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHH
Confidence 99999999999999876
No 143
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=97.80 E-value=0.0014 Score=57.76 Aligned_cols=154 Identities=12% Similarity=0.022 Sum_probs=110.6
Q ss_pred CCcHHHHHHHHHHHHHcCCCCCH----HHHHHHHHHHHhcCCHHHHHHHHHHHHHCCC-CCC----HHHHHHHHHHHHhc
Q 021583 66 SNVKEEVYGALDSFIAWELEFPL----ITVKKALKTLENEKDWKRIIQVTKWMLSKGQ-GRT----MGTYFLLLNALAED 136 (310)
Q Consensus 66 ~~~~~~~~~~~~~m~~~~~~p~~----~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~-~p~----~~ty~~ll~~~~~~ 136 (310)
.+..+.+...+++.....-..+. .+++.+-..+...|++++|.+.+++.....- ..+ ..++..+-..+...
T Consensus 27 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~ 106 (373)
T 1hz4_A 27 DGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQ 106 (373)
T ss_dssp TTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHC
Confidence 45555567777776654322222 2566777888899999999999998663210 122 24467788889999
Q ss_pred CCHHHHHHHHHHHHhc----CCC-CC-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCC--C--CHHHHHHHHHHHHh
Q 021583 137 GRLDEAEELWTKIFLD----HLE-GT-PRIFFDKMISIYYNRGMHEKMFEIFADMEELGVR--P--NVSIVSMMGNAFQK 206 (310)
Q Consensus 137 g~~~~A~~~~~~m~~~----~~~-~~-~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~--p--~~~ty~~li~~~~~ 206 (310)
|++++|.+.+++..+. +.. .+ ....+..+-..|...|++++|...+++.....-. + ...+|..+...+..
T Consensus 107 G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~ 186 (373)
T 1hz4_A 107 GFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLA 186 (373)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHH
Confidence 9999999999887654 221 02 2246778888999999999999999987653221 1 24678888999999
Q ss_pred cCCHHHHHHHHHh
Q 021583 207 LGMLDKYEKLKKK 219 (310)
Q Consensus 207 ~g~~~~a~~l~~~ 219 (310)
.|++++|...+++
T Consensus 187 ~g~~~~A~~~l~~ 199 (373)
T 1hz4_A 187 RGDLDNARSQLNR 199 (373)
T ss_dssp HTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHH
Confidence 9999999999876
No 144
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=97.80 E-value=0.0003 Score=64.98 Aligned_cols=119 Identities=8% Similarity=-0.068 Sum_probs=92.6
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCC
Q 021583 95 LKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGM 174 (310)
Q Consensus 95 i~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~ 174 (310)
-..+.+.|++++|.+.|++..+.. .-+..+|..+-..|.+.|++++|++.+++..+..- .+...|..+-.+|.+.|+
T Consensus 13 g~~~~~~g~~~~A~~~~~~Al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p--~~~~~~~~lg~~~~~~g~ 89 (477)
T 1wao_1 13 ANDYFKAKDYENAIKFYSQAIELN-PSNAIYYGNRSLAYLRTECYGYALGDATRAIELDK--KYIKGYYRRAASNMALGK 89 (477)
T ss_dssp SSSTTTTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCT--TCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhCCHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHcCC
Confidence 345667899999999999988662 34588999999999999999999999999998743 455689999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCC-HHHHHHHHHH--HHhcCCHHHHHHHHH
Q 021583 175 HEKMFEIFADMEELGVRPN-VSIVSMMGNA--FQKLGMLDKYEKLKK 218 (310)
Q Consensus 175 ~~~a~~l~~~m~~~g~~p~-~~ty~~li~~--~~~~g~~~~a~~l~~ 218 (310)
+++|++.+++..+.. |+ ...+..+..+ +.+.|++++|.++++
T Consensus 90 ~~eA~~~~~~al~~~--p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 90 FRAALRDYETVVKVK--PHDKDAKMKYQECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp HHHHHHHHHHHHHHS--TTCTTHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 999999999987642 32 3344444444 888999999999988
No 145
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=97.79 E-value=4.5e-05 Score=58.69 Aligned_cols=117 Identities=15% Similarity=0.087 Sum_probs=93.1
Q ss_pred HHHhcCCHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCH
Q 021583 97 TLENEKDWKRIIQVTKWMLSKGQGRT-MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMH 175 (310)
Q Consensus 97 ~~~~~~~~~~a~~~~~~m~~~g~~p~-~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~ 175 (310)
.+...|++++|...++..... .|+ ...+-.+-..|.+.|++++|++.|++..+.. |.+..+|..+-..|.+.|++
T Consensus 6 ~~~~~~~~e~ai~~~~~a~~~--~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~--p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 6 MRRSKADVERYIASVQGSTPS--PRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQ--ERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp -CCCHHHHHHHHHHHHHHSCS--HHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHcChHHHHHHHHHHhccc--CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcCch
Confidence 344567888898888875533 233 3455668889999999999999999999875 34556899999999999999
Q ss_pred HHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhcCCHHHHHHH-HHh
Q 021583 176 EKMFEIFADMEELGVRP-NVSIVSMMGNAFQKLGMLDKYEKL-KKK 219 (310)
Q Consensus 176 ~~a~~l~~~m~~~g~~p-~~~ty~~li~~~~~~g~~~~a~~l-~~~ 219 (310)
++|+..|+...+. .| +...|..+...|.+.|+.++|.+. +++
T Consensus 82 ~~A~~~~~~al~~--~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~ 125 (150)
T 4ga2_A 82 DKAVECYRRSVEL--NPTQKDLVLKIAELLCKNDVTDGRAKYWVER 125 (150)
T ss_dssp HHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHCSSSSHHHHHHHH
T ss_pred HHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCChHHHHHHHHHH
Confidence 9999999998874 46 478899999999999999876655 343
No 146
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=97.79 E-value=0.001 Score=49.37 Aligned_cols=106 Identities=10% Similarity=0.013 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCC---h--HHHHH
Q 021583 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT---P--RIFFD 163 (310)
Q Consensus 89 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~---~--~~~y~ 163 (310)
.++..+-..+.+.|++++|.+.|+...+.. +-+...|..+-..|.+.|++++|++.|++..+..-... . ..+|.
T Consensus 9 ~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~-p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~ 87 (127)
T 4gcn_A 9 IAEKDLGNAAYKQKDFEKAHVHYDKAIELD-PSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMS 87 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHH
Confidence 456667778888888888888888877652 34577788888888888888888888887765421001 1 12566
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHH
Q 021583 164 KMISIYYNRGMHEKMFEIFADMEELGVRPNVSIV 197 (310)
Q Consensus 164 ~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty 197 (310)
.+-..|...|++++|++.|+.-... .||..+.
T Consensus 88 ~lg~~~~~~~~~~~A~~~~~kal~~--~~~~~~~ 119 (127)
T 4gcn_A 88 RAGNAFQKQNDLSLAVQWFHRSLSE--FRDPELV 119 (127)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH--SCCHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhh--CcCHHHH
Confidence 7777778888888888888876653 3555443
No 147
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=97.78 E-value=0.00038 Score=51.72 Aligned_cols=94 Identities=19% Similarity=0.217 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCC--CCCC----HHHH
Q 021583 124 GTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG--VRPN----VSIV 197 (310)
Q Consensus 124 ~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g--~~p~----~~ty 197 (310)
.++..|-+.+.+.|++++|++.|++..+.. |.+...|+.+-.+|.+.|++++|++.++...+.. ..++ ..+|
T Consensus 9 ~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~--p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~ 86 (127)
T 4gcn_A 9 IAEKDLGNAAYKQKDFEKAHVHYDKAIELD--PSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAM 86 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHH
Confidence 567788899999999999999999998864 3556789999999999999999999999876531 2222 2478
Q ss_pred HHHHHHHHhcCCHHHHHHHHHh
Q 021583 198 SMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 198 ~~li~~~~~~g~~~~a~~l~~~ 219 (310)
..+-.+|...|++++|.+.|++
T Consensus 87 ~~lg~~~~~~~~~~~A~~~~~k 108 (127)
T 4gcn_A 87 SRAGNAFQKQNDLSLAVQWFHR 108 (127)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHH
Confidence 8888899999999999999876
No 148
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=97.77 E-value=0.00067 Score=49.33 Aligned_cols=95 Identities=18% Similarity=0.158 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCC--CCCC----HHH
Q 021583 123 MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG--VRPN----VSI 196 (310)
Q Consensus 123 ~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g--~~p~----~~t 196 (310)
...|..+...+...|++++|...|++..+..- .+...|..+...|...|++++|...++...... ..++ ..+
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~--~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 81 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDP--TNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKA 81 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC--ccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHH
Confidence 35677888899999999999999999988753 455689999999999999999999999987642 1233 678
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHh
Q 021583 197 VSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 197 y~~li~~~~~~g~~~~a~~l~~~ 219 (310)
|..+..+|...|++++|.+.|++
T Consensus 82 ~~~la~~~~~~~~~~~A~~~~~~ 104 (131)
T 1elr_A 82 YARIGNSYFKEEKYKDAIHFYNK 104 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHH
Confidence 88999999999999999999876
No 149
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=97.73 E-value=0.0015 Score=57.40 Aligned_cols=192 Identities=9% Similarity=0.002 Sum_probs=122.7
Q ss_pred CcHHHHHHHHHHHH----HcCCC--CC-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCC--C--CHHHHHHHHHHHHh
Q 021583 67 NVKEEVYGALDSFI----AWELE--FP-LITVKKALKTLENEKDWKRIIQVTKWMLSKGQG--R--TMGTYFLLLNALAE 135 (310)
Q Consensus 67 ~~~~~~~~~~~~m~----~~~~~--p~-~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~--p--~~~ty~~ll~~~~~ 135 (310)
+..+.+...+++.. +.+.. |. ...+..+-..+...|++++|...++......-. + ...+|..+-..+..
T Consensus 107 G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~ 186 (373)
T 1hz4_A 107 GFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLA 186 (373)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHH
Confidence 44445555555543 23332 32 346677888899999999999999987644221 1 34678888999999
Q ss_pred cCCHHHHHHHHHHHHhcCCCCChHHHHH-----HHHHHHHHcCCHHHHHHHHHHHHHCCCCC---CHHHHHHHHHHHHhc
Q 021583 136 DGRLDEAEELWTKIFLDHLEGTPRIFFD-----KMISIYYNRGMHEKMFEIFADMEELGVRP---NVSIVSMMGNAFQKL 207 (310)
Q Consensus 136 ~g~~~~A~~~~~~m~~~~~~~~~~~~y~-----~li~~~~~~g~~~~a~~l~~~m~~~g~~p---~~~ty~~li~~~~~~ 207 (310)
.|++++|...+++..+..-.......|. ..+..+...|+.++|...+++.......+ ....+..+...+...
T Consensus 187 ~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~ 266 (373)
T 1hz4_A 187 RGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILL 266 (373)
T ss_dssp HTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHCCCHHHHHHHHHhCCCCCCCcchhhHHHHHHHHHHHHHc
Confidence 9999999999998875421111101122 33345779999999999998876533211 134577888999999
Q ss_pred CCHHHHHHHHHhCCCCccchheeccCcccCCh-hhhhHhhhc--cCCChhhHHhhhchhh
Q 021583 208 GMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPA-KPKYELDSA--TEGKTNEVETTKNPNE 264 (310)
Q Consensus 208 g~~~~a~~l~~~~~p~~~~~~~~~~~~~~~~~-~~~~~li~~--~~g~~~~a~~~~~~m~ 264 (310)
|+.++|...+++.... ....+...+. ..+..+-.. ..|+.++|...+....
T Consensus 267 g~~~~A~~~l~~a~~~------~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~al 320 (373)
T 1hz4_A 267 GEFEPAEIVLEELNEN------ARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDAL 320 (373)
T ss_dssp TCHHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH------HHhCcchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999998763110 0011111111 122222333 7899999988886553
No 150
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.73 E-value=0.0012 Score=49.24 Aligned_cols=96 Identities=17% Similarity=0.059 Sum_probs=82.5
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCCh---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHH
Q 021583 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP---RIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIV 197 (310)
Q Consensus 121 p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~---~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty 197 (310)
.+...+..+...+...|++++|.+.|++..+..- .+ ...|..+-..|...|++++|.+.++...+.. +.+...|
T Consensus 26 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~ 102 (148)
T 2dba_A 26 SSVEQLRKEGNELFKCGDYGGALAAYTQALGLDA--TPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKD-GGDVKAL 102 (148)
T ss_dssp CCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCC--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-SCCHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcc--cchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC-ccCHHHH
Confidence 4678888899999999999999999999987643 33 4589999999999999999999999987653 2257888
Q ss_pred HHHHHHHHhcCCHHHHHHHHHh
Q 021583 198 SMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 198 ~~li~~~~~~g~~~~a~~l~~~ 219 (310)
..+..+|...|++++|.+.|++
T Consensus 103 ~~~a~~~~~~~~~~~A~~~~~~ 124 (148)
T 2dba_A 103 YRRSQALEKLGRLDQAVLDLQR 124 (148)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999999999999876
No 151
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=97.70 E-value=0.00042 Score=59.80 Aligned_cols=169 Identities=9% Similarity=-0.052 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHC----CCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC--CCCCh--H
Q 021583 89 ITVKKALKTLENEKDWKRIIQVTKWMLSK----GQGRT-MGTYFLLLNALAEDGRLDEAEELWTKIFLDH--LEGTP--R 159 (310)
Q Consensus 89 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~----g~~p~-~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~--~~~~~--~ 159 (310)
..|+.+...|...|++++|.+.|.+.... |-.+. ..+|+.+...|.+.|++++|...|++..+.. ...+. .
T Consensus 37 ~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a 116 (307)
T 2ifu_A 37 SEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAA 116 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 36778888899999999999999986533 21111 4688889999999999999999998766541 11122 2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHC----CCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccchheeccCc
Q 021583 160 IFFDKMISIYYNRGMHEKMFEIFADMEEL----GVRPN-VSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKR 234 (310)
Q Consensus 160 ~~y~~li~~~~~~g~~~~a~~l~~~m~~~----g~~p~-~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~~~~~~~~ 234 (310)
.+|+.+-..|.. |++++|++.|++..+. |-.+. ..+|..+...|.+.|++++|...|++.... +.. .+
T Consensus 117 ~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---~~~---~~ 189 (307)
T 2ifu_A 117 MALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSM---YKE---ME 189 (307)
T ss_dssp HHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---HHH---TT
T ss_pred HHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH---HHH---cC
Confidence 378888889988 9999999999987642 21111 467889999999999999999998762100 000 00
Q ss_pred ccC-ChhhhhHhhhc--cCCChhhHHhhhchhh
Q 021583 235 VRI-PAKPKYELDSA--TEGKTNEVETTKNPNE 264 (310)
Q Consensus 235 ~~~-~~~~~~~li~~--~~g~~~~a~~~~~~m~ 264 (310)
... ....+..+... ..|+.++|...++...
T Consensus 190 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 190 NYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred ChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 000 11133333333 6799999999998776
No 152
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=97.68 E-value=0.0047 Score=50.00 Aligned_cols=144 Identities=13% Similarity=-0.042 Sum_probs=111.8
Q ss_pred CcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHh----cCC
Q 021583 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEK----DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAE----DGR 138 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~----~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~----~g~ 138 (310)
+..+++...+++..+.| +..++..|-..|.. + ++++|.+.|+...+.| +..++..|-..|.. .++
T Consensus 32 ~~~~~A~~~~~~a~~~g---~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~g---~~~a~~~Lg~~y~~g~g~~~d 104 (212)
T 3rjv_A 32 GDYQKAEYWAQKAAAQG---DGDALALLAQLKIR-NPQQADYPQARQLAEKAVEAG---SKSGEIVLARVLVNRQAGATD 104 (212)
T ss_dssp TCHHHHHHHHHHHHHTT---CHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHTCGGGSSCC
T ss_pred CCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCccC
Confidence 44556688888887766 46777777777777 6 8999999999988775 56778888888877 889
Q ss_pred HHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhc-C-----
Q 021583 139 LDEAEELWTKIFLDHLEGTPRIFFDKMISIYYN----RGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL-G----- 208 (310)
Q Consensus 139 ~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~----~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~-g----- 208 (310)
.++|.++|++..+.+........+..|-..|.. .++.++|++.|+.-.+. ..+...+..|-..|... |
T Consensus 105 ~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~--~~~~~a~~~Lg~~y~~g~gg~~~~ 182 (212)
T 3rjv_A 105 VAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL--SRTGYAEYWAGMMFQQGEKGFIEP 182 (212)
T ss_dssp HHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT--SCTTHHHHHHHHHHHHCBTTTBCC
T ss_pred HHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHcCCCCCCCC
Confidence 999999999998876410014578888888888 88999999999998876 23445677777777653 3
Q ss_pred CHHHHHHHHHh
Q 021583 209 MLDKYEKLKKK 219 (310)
Q Consensus 209 ~~~~a~~l~~~ 219 (310)
+.++|.++|++
T Consensus 183 d~~~A~~~~~~ 193 (212)
T 3rjv_A 183 NKQKALHWLNV 193 (212)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 89999999865
No 153
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=97.67 E-value=0.00051 Score=66.33 Aligned_cols=148 Identities=7% Similarity=-0.025 Sum_probs=117.0
Q ss_pred CcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHH
Q 021583 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELW 146 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~ 146 (310)
+..++|...+++..+.+ +-+...|..+-.+|.+.|++++|.+.|+...+.. .-+...|..+-..|.+.|++++ ++.|
T Consensus 447 g~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~-P~~~~~~~~lg~~~~~~g~~~~-~~~~ 523 (681)
T 2pzi_A 447 GDVAKATRKLDDLAERV-GWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTF-PGELAPKLALAATAELAGNTDE-HKFY 523 (681)
T ss_dssp TCHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS-TTCSHHHHHHHHHHHHHTCCCT-TCHH
T ss_pred CCHHHHHHHHHHHhccC-cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHcCChHH-HHHH
Confidence 45667788888877665 4467889999999999999999999999988663 2356888999999999999999 9999
Q ss_pred HHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHhcCC--------HHHHHHHH
Q 021583 147 TKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN-VSIVSMMGNAFQKLGM--------LDKYEKLK 217 (310)
Q Consensus 147 ~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~-~~ty~~li~~~~~~g~--------~~~a~~l~ 217 (310)
++..+.+- .+...|..+-..|.+.|++++|.+.|++..+ ..|+ ...|..+..++...|+ +++|.+.+
T Consensus 524 ~~al~~~P--~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~--l~P~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~l 599 (681)
T 2pzi_A 524 QTVWSTND--GVISAAFGLARARSAEGDRVGAVRTLDEVPP--TSRHFTTARLTSAVTLLSGRSTSEVTEEQIRDAARRV 599 (681)
T ss_dssp HHHHHHCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHTSCT--TSTTHHHHHHHHHHHTC-------CCHHHHHHHHHHH
T ss_pred HHHHHhCC--chHHHHHHHHHHHHHcCCHHHHHHHHHhhcc--cCcccHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHH
Confidence 99988753 4556899999999999999999999998665 4576 4677777787766444 66777777
Q ss_pred HhCC
Q 021583 218 KKYP 221 (310)
Q Consensus 218 ~~~~ 221 (310)
..+.
T Consensus 600 ~~~~ 603 (681)
T 2pzi_A 600 EALP 603 (681)
T ss_dssp HTSC
T ss_pred hhCC
Confidence 6654
No 154
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=97.67 E-value=0.00011 Score=53.56 Aligned_cols=87 Identities=13% Similarity=0.048 Sum_probs=62.1
Q ss_pred hcCCHHHHHHHHHHHHHCC--CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHH
Q 021583 100 NEKDWKRIIQVTKWMLSKG--QGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEK 177 (310)
Q Consensus 100 ~~~~~~~a~~~~~~m~~~g--~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~ 177 (310)
..|++++|...|+...+.+ -.-+...+..+-..|...|++++|.+.|++..+..- .+...|..+-.+|.+.|++++
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p--~~~~~~~~l~~~~~~~g~~~~ 79 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFP--NHQALRVFYAMVLYNLGRYEQ 79 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHHTCHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CchHHHHHHHHHHHHcCCHHH
Confidence 3577888888888877654 123456777788888888888888888888887653 344578888888888888888
Q ss_pred HHHHHHHHHHC
Q 021583 178 MFEIFADMEEL 188 (310)
Q Consensus 178 a~~l~~~m~~~ 188 (310)
|.+.++...+.
T Consensus 80 A~~~~~~al~~ 90 (117)
T 3k9i_A 80 GVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 88888887653
No 155
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=97.66 E-value=0.0014 Score=59.47 Aligned_cols=145 Identities=11% Similarity=-0.081 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhc--------------
Q 021583 71 EVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAED-------------- 136 (310)
Q Consensus 71 ~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~-------------- 136 (310)
.+...+++..... +.+..++..+...|.+.|++++|.+.|+...+.. +-+..++..+-..|...
T Consensus 231 ~a~~~~~~al~~~-~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~ 308 (472)
T 4g1t_A 231 EGEKLVEEALEKA-PGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYI-PNNAYLHCQIGCCYRAKVFQVMNLRENGMYG 308 (472)
T ss_dssp HHHHHHHHHHHHC-SSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHHHHHHHC------C
T ss_pred HHHHHHHHHHHhC-ccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhC-CChHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 4555565555443 3456778888888888888888888888877552 23455666555544321
Q ss_pred -----CCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCH--HHHHHHHH-HHHhcC
Q 021583 137 -----GRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNV--SIVSMMGN-AFQKLG 208 (310)
Q Consensus 137 -----g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~--~ty~~li~-~~~~~g 208 (310)
+..++|...|++..+..- ....+|..+-..|...|++++|++.|+...+....|.. ..+..+.. .+...|
T Consensus 309 ~~~~~~~~~~A~~~~~~a~~~~~--~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (472)
T 4g1t_A 309 KRKLLELIGHAVAHLKKADEAND--NLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVAKQLLHLRYGNFQLYQMK 386 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCT--TTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHhhHHHHHHHHHHHhhcCC--chhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHCC
Confidence 235677777777776543 33347888888999999999999999988775433322 12222222 234678
Q ss_pred CHHHHHHHHHh
Q 021583 209 MLDKYEKLKKK 219 (310)
Q Consensus 209 ~~~~a~~l~~~ 219 (310)
+.++|...|++
T Consensus 387 ~~~~Ai~~y~k 397 (472)
T 4g1t_A 387 CEDKAIHHFIE 397 (472)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99999988875
No 156
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=97.65 E-value=0.0014 Score=57.48 Aligned_cols=115 Identities=8% Similarity=-0.045 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHcCCCCC--------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q 021583 69 KEEVYGALDSFIAWELEFP--------------LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALA 134 (310)
Q Consensus 69 ~~~~~~~~~~m~~~~~~p~--------------~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~ 134 (310)
.+.|...+++..+..-... ...|..+-.+|.+.|++++|...|+...+.. ..+...|..+-.+|.
T Consensus 163 ~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~ 241 (336)
T 1p5q_A 163 YKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELD-SNNEKGLSRRGEAHL 241 (336)
T ss_dssp HHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHH
Confidence 3444666666665542221 5789999999999999999999999988763 447889999999999
Q ss_pred hcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHH-HHHHHHHH
Q 021583 135 EDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKM-FEIFADME 186 (310)
Q Consensus 135 ~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a-~~l~~~m~ 186 (310)
..|++++|...|++..+.. |.+...+..+-..+.+.|+.++| .+++..|.
T Consensus 242 ~~g~~~~A~~~~~~al~l~--P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~ 292 (336)
T 1p5q_A 242 AVNDFELARADFQKVLQLY--PNNKAAKTQLAVCQQRIRRQLAREKKLYANMF 292 (336)
T ss_dssp HTTCHHHHHHHHHHHHHHC--SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999875 34556899999999999999988 44666664
No 157
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=97.64 E-value=0.00086 Score=49.30 Aligned_cols=92 Identities=7% Similarity=-0.147 Sum_probs=59.8
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHc
Q 021583 93 KALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNR 172 (310)
Q Consensus 93 ~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~ 172 (310)
.+-..+.+.|++++|...|+...+.. .-+...|..+-..+...|++++|+..|++..+..- .+...|..+-..|.+.
T Consensus 22 ~~g~~~~~~g~~~~A~~~~~~al~~~-P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P--~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 22 EEGLSMLKLANLAEAALAFEAVCQKE-PEREEAWRSLGLTQAENEKDGLAIIALNHARMLDP--KDIAVHAALAVSHTNE 98 (121)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHc
Confidence 44455666777777777777766542 23566666666777777777777777777666542 3334666777777777
Q ss_pred CCHHHHHHHHHHHHH
Q 021583 173 GMHEKMFEIFADMEE 187 (310)
Q Consensus 173 g~~~~a~~l~~~m~~ 187 (310)
|++++|...++...+
T Consensus 99 g~~~~A~~~~~~al~ 113 (121)
T 1hxi_A 99 HNANAALASLRAWLL 113 (121)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHH
Confidence 777777777776554
No 158
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.64 E-value=0.00013 Score=67.67 Aligned_cols=100 Identities=9% Similarity=-0.011 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHC-----C-CCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc-----CCC
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSK-----G-QGR-TMGTYFLLLNALAEDGRLDEAEELWTKIFLD-----HLE 155 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~-----g-~~p-~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~-----~~~ 155 (310)
..+++.|...|...|++++|..++++..+. | -.| ...+++.|-..|...|++++|+.++++..+. |-.
T Consensus 351 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~ 430 (490)
T 3n71_A 351 LRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPS 430 (490)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 568999999999999999999999986532 2 123 3588999999999999999999999876643 554
Q ss_pred CChHH-HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 021583 156 GTPRI-FFDKMISIYYNRGMHEKMFEIFADMEE 187 (310)
Q Consensus 156 ~~~~~-~y~~li~~~~~~g~~~~a~~l~~~m~~ 187 (310)
++.+. +.+.|-.++...+.+++|+.+|..+++
T Consensus 431 Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~ 463 (490)
T 3n71_A 431 HPITKDLEAMRMQTEMELRMFRQNEFMYHKMRE 463 (490)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44443 788888999999999999999999975
No 159
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=97.62 E-value=0.0035 Score=45.69 Aligned_cols=99 Identities=9% Similarity=0.009 Sum_probs=74.2
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHCCCCCCH---HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCCh-HHHHHHHHHH
Q 021583 93 KALKTLENEKDWKRIIQVTKWMLSKGQGRTM---GTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP-RIFFDKMISI 168 (310)
Q Consensus 93 ~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~---~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~-~~~y~~li~~ 168 (310)
.+...+.+.|++++|.+.|+...+..- .+. ..+..+-..|.+.|++++|...|++..+..-.... ...+..+-..
T Consensus 7 ~~a~~~~~~~~~~~A~~~~~~~~~~~p-~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~ 85 (129)
T 2xev_A 7 NVAFDALKNGKYDDASQLFLSFLELYP-NGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLS 85 (129)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCS-SSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHCC-CCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHH
Confidence 455667788999999999998876421 122 47777888889999999999999998876532111 3467888888
Q ss_pred HHHcCCHHHHHHHHHHHHHCCCCCCH
Q 021583 169 YYNRGMHEKMFEIFADMEELGVRPNV 194 (310)
Q Consensus 169 ~~~~g~~~~a~~l~~~m~~~g~~p~~ 194 (310)
|.+.|++++|.+.|+...+.. |+.
T Consensus 86 ~~~~g~~~~A~~~~~~~~~~~--p~~ 109 (129)
T 2xev_A 86 QYGEGKNTEAQQTLQQVATQY--PGS 109 (129)
T ss_dssp HHHTTCHHHHHHHHHHHHHHS--TTS
T ss_pred HHHcCCHHHHHHHHHHHHHHC--CCC
Confidence 899999999999999887643 543
No 160
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=97.62 E-value=0.0011 Score=60.63 Aligned_cols=125 Identities=10% Similarity=-0.042 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCC--------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRT--------------MGTYFLLLNALAEDGRLDEAEELWTKIFLDH 153 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~--------------~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~ 153 (310)
...|..+-..|.+.|++++|...|+...+..-... ...|..+-.+|.+.|++++|+..|++..+..
T Consensus 268 a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 347 (457)
T 1kt0_A 268 AAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLD 347 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 34677888899999999999999999876421111 6889999999999999999999999999875
Q ss_pred CCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhcCCHHHHHHH
Q 021583 154 LEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP-NVSIVSMMGNAFQKLGMLDKYEKL 216 (310)
Q Consensus 154 ~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~li~~~~~~g~~~~a~~l 216 (310)
- .+...|..+-.+|...|++++|...|+...+. .| +...+..+..++.+.++.+++.+-
T Consensus 348 p--~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l--~P~~~~a~~~l~~~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 348 S--ANEKGLYRRGEAQLLMNEFESAKGDFEKVLEV--NPQNKAARLQISMCQKKAKEHNERDRR 407 (457)
T ss_dssp T--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--C----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred C--ccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 45568999999999999999999999998764 45 457788889999999999888654
No 161
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.55 E-value=0.00067 Score=57.88 Aligned_cols=125 Identities=6% Similarity=-0.124 Sum_probs=97.0
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCCh---HHHHHHHHH
Q 021583 91 VKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP---RIFFDKMIS 167 (310)
Q Consensus 91 ~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~---~~~y~~li~ 167 (310)
.-.+...+...|++++|.++|+.+...+ |+....-.+-..+.+.+++++|+..|+...+.. .+ ...+..+=.
T Consensus 105 ~LayA~~L~~~g~y~eA~~~l~~~~~~~--p~~~~~~~~a~l~~~~~r~~dA~~~l~~a~~~~---d~~~~~~a~~~LG~ 179 (282)
T 4f3v_A 105 TMGFAACEAAQGNYADAMEALEAAPVAG--SEHLVAWMKAVVYGAAERWTDVIDQVKSAGKWP---DKFLAGAAGVAHGV 179 (282)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHTSSCCTT--CHHHHHHHHHHHHHHTTCHHHHHHHHTTGGGCS---CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhcC--CchHHHHHHHHHHHHcCCHHHHHHHHHHhhccC---CcccHHHHHHHHHH
Confidence 3445677889999999999999877543 654455566668899999999999998554432 22 236788888
Q ss_pred HHHHcCCHHHHHHHHHHHHHCCCCCC--HHHHHHHHHHHHhcCCHHHHHHHHHhC
Q 021583 168 IYYNRGMHEKMFEIFADMEELGVRPN--VSIVSMMGNAFQKLGMLDKYEKLKKKY 220 (310)
Q Consensus 168 ~~~~~g~~~~a~~l~~~m~~~g~~p~--~~ty~~li~~~~~~g~~~~a~~l~~~~ 220 (310)
++.+.|++++|+..|++.......|. .......-.++.+.|+.++|..+|+++
T Consensus 180 al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a 234 (282)
T 4f3v_A 180 AAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWL 234 (282)
T ss_dssp HHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 99999999999999999875444364 245667778899999999999999873
No 162
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.50 E-value=0.0049 Score=63.17 Aligned_cols=141 Identities=13% Similarity=0.048 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHH
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~ 167 (310)
..+|..+-.++.+.|++++|.+.|..- -|...|.-++..|.+.|++++|.+++..-++.. .+....+.+..
T Consensus 1105 p~vWsqLAKAql~~G~~kEAIdsYiKA------dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~---~e~~Idt~Laf 1175 (1630)
T 1xi4_A 1105 PAVWSQLAKAQLQKGMVKEAIDSYIKA------DDPSSYMEVVQAANTSGNWEELVKYLQMARKKA---RESYVETELIF 1175 (1630)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHhc------CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhc---ccccccHHHHH
Confidence 566777777777777777777777442 456677777777777788877777777655543 11122334777
Q ss_pred HHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccchheeccCcccCChhhhhHhhh
Q 021583 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDS 247 (310)
Q Consensus 168 ~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~ 247 (310)
+|++.+++++...+.. .|+...|..+-..|...|++++|..+|... ..|..+..
T Consensus 1176 aYAKl~rleele~fI~-------~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA-------------------~ny~rLA~ 1229 (1630)
T 1xi4_A 1176 ALAKTNRLAELEEFIN-------GPNNAHIQQVGDRCYDEKMYDAAKLLYNNV-------------------SNFGRLAS 1229 (1630)
T ss_pred HHHhhcCHHHHHHHHh-------CCCHHHHHHHHHHHHhcCCHHHHHHHHHhh-------------------hHHHHHHH
Confidence 7777777775444431 345566667788888888888888886552 24455555
Q ss_pred c--cCCChhhHHhhhchh
Q 021583 248 A--TEGKTNEVETTKNPN 263 (310)
Q Consensus 248 ~--~~g~~~~a~~~~~~m 263 (310)
+ +.|++++|.+.+..-
T Consensus 1230 tLvkLge~q~AIEaarKA 1247 (1630)
T 1xi4_A 1230 TLVHLGEYQAAVDGARKA 1247 (1630)
T ss_pred HHHHhCCHHHHHHHHHHh
Confidence 5 667777777776544
No 163
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=97.50 E-value=0.00026 Score=50.43 Aligned_cols=94 Identities=9% Similarity=0.006 Sum_probs=61.4
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCC-------H
Q 021583 122 TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN-------V 194 (310)
Q Consensus 122 ~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~-------~ 194 (310)
+...+..+-..+.+.|++++|.+.|++..+..- .+...|..+-.+|.+.|++++|.+.++...+. .|+ .
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p--~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~~ 78 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQP--QNPVGYSNKAMALIKLGEYTQAIQMCQQGLRY--TSTAEHVAIRS 78 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS--CSSTTSHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--CCCccHHHHHH
Confidence 345666677777777888888888877776542 34456777777788888888888888777653 343 3
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 195 SIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 195 ~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
..+..+..++...|+.+.|...+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 79 KLQYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHHHHHHhHhhhHhHHHH
Confidence 4455555556666655555444433
No 164
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=97.49 E-value=0.0018 Score=47.55 Aligned_cols=90 Identities=6% Similarity=-0.047 Sum_probs=77.4
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHH
Q 021583 126 YFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP-NVSIVSMMGNAF 204 (310)
Q Consensus 126 y~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~li~~~ 204 (310)
+-.+-..+.+.|++++|...|++..+.. |.+...|..+-..+...|++++|+..|+...+. .| +...+..+..+|
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~--P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l--~P~~~~~~~~la~~~ 95 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKE--PEREEAWRSLGLTQAENEKDGLAIIALNHARML--DPKDIAVHAALAVSH 95 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHH
Confidence 3445677889999999999999999875 345568999999999999999999999998774 45 568889999999
Q ss_pred HhcCCHHHHHHHHHh
Q 021583 205 QKLGMLDKYEKLKKK 219 (310)
Q Consensus 205 ~~~g~~~~a~~l~~~ 219 (310)
...|++++|...|++
T Consensus 96 ~~~g~~~~A~~~~~~ 110 (121)
T 1hxi_A 96 TNEHNANAALASLRA 110 (121)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHH
Confidence 999999999999876
No 165
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=97.48 E-value=0.0054 Score=55.54 Aligned_cols=206 Identities=8% Similarity=-0.089 Sum_probs=125.7
Q ss_pred HHHHHHHhcCcCchHhHHHHHHhcCCcHHHHHHHHHHHHHcCCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHC---
Q 021583 42 VWKARKRIGTISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEF-PLITVKKALKTLENEKDWKRIIQVTKWMLSK--- 117 (310)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~m~~~~~~p-~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~--- 117 (310)
+..++.+...+...|++.+|+..+. +|.+++.........| ...+|+.+-..|...|++++|...++...+.
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~----kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~ 126 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLR----KAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEK 126 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHH----HHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHH----HHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHh
Confidence 3444444444555566666654433 2333333322222233 4678999999999999999999999886532
Q ss_pred --C-CC-CCHHHHHHHHHHHHhc--CCHHHHHHHHHHHHhcCCCCChHHHHHHHHHH---HHHcCCHHHHHHHHHHHHHC
Q 021583 118 --G-QG-RTMGTYFLLLNALAED--GRLDEAEELWTKIFLDHLEGTPRIFFDKMISI---YYNRGMHEKMFEIFADMEEL 188 (310)
Q Consensus 118 --g-~~-p~~~ty~~ll~~~~~~--g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~---~~~~g~~~~a~~l~~~m~~~ 188 (310)
+ .. -...+|+.+-.++.+. ++.++|.+.|++..+..- .+...+..+... +...++.++|++.++...+.
T Consensus 127 ~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p--~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l 204 (472)
T 4g1t_A 127 FSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKP--KNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRL 204 (472)
T ss_dssp SCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHST--TCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHH
T ss_pred cccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhc
Confidence 1 11 2356777666666654 468999999999888753 333344444443 45567888898888877654
Q ss_pred CCCC-CHHHHHHHHHHHHh----cCCHHHHHHHHHhCCCCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhc
Q 021583 189 GVRP-NVSIVSMMGNAFQK----LGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKN 261 (310)
Q Consensus 189 g~~p-~~~ty~~li~~~~~----~g~~~~a~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~ 261 (310)
.| +...+..+...+.. .|+.++|.+++++... . -+.+...+..+-.. ..|++++|.+.+.
T Consensus 205 --~p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~-----~------~~~~~~~~~~lg~~~~~~~~~~~A~~~~~ 271 (472)
T 4g1t_A 205 --NPDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEALE-----K------APGVTDVLRSAAKFYRRKDEPDKAIELLK 271 (472)
T ss_dssp --CSSCHHHHHHHHHHHHHCC------CHHHHHHHHHHH-----H------CSSCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred --CCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH-----h------CccHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 34 45666666655554 4677888888765210 0 02233344444444 8899999999887
Q ss_pred hhhcC
Q 021583 262 PNESS 266 (310)
Q Consensus 262 ~m~~~ 266 (310)
.....
T Consensus 272 ~al~~ 276 (472)
T 4g1t_A 272 KALEY 276 (472)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 76543
No 166
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=97.48 E-value=0.002 Score=57.30 Aligned_cols=124 Identities=11% Similarity=0.042 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHC---------------CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC
Q 021583 89 ITVKKALKTLENEKDWKRIIQVTKWMLSK---------------GQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDH 153 (310)
Q Consensus 89 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~---------------g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~ 153 (310)
..+..+-..+.+.|++++|.+.|+...+. --.-+..+|..+-..|.+.|++++|++.+++..+..
T Consensus 224 ~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 303 (370)
T 1ihg_A 224 EDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEID 303 (370)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhC
Confidence 45777888999999999999999987751 112345788899999999999999999999999864
Q ss_pred CCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhcCCHHHHHHH
Q 021583 154 LEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP-NVSIVSMMGNAFQKLGMLDKYEKL 216 (310)
Q Consensus 154 ~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~li~~~~~~g~~~~a~~l 216 (310)
+.+...|..+-.+|...|++++|.+.|+...+. .| +...+..+..++...++.+++.+.
T Consensus 304 --p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l--~P~~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 304 --PSNTKALYRRAQGWQGLKEYDQALADLKKAQEI--APEDKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp --TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred --chhHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345568999999999999999999999998764 35 567778888888888888877554
No 167
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=97.43 E-value=0.00052 Score=49.91 Aligned_cols=83 Identities=16% Similarity=0.093 Sum_probs=66.6
Q ss_pred hcCCHHHHHHHHHHHHhcCCC-CChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhcCCHHH
Q 021583 135 EDGRLDEAEELWTKIFLDHLE-GTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP-NVSIVSMMGNAFQKLGMLDK 212 (310)
Q Consensus 135 ~~g~~~~A~~~~~~m~~~~~~-~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~li~~~~~~g~~~~ 212 (310)
..|++++|+..|++..+.+.. |.+...|..+-..|...|++++|.+.|+...+.. | +...+..+..+|...|++++
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~l~~~~~~~g~~~~ 79 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQF--PNHQALRVFYAMVLYNLGRYEQ 79 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHTCHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCchHHHHHHHHHHHHcCCHHH
Confidence 468899999999999987532 1223489999999999999999999999988753 4 47889999999999999999
Q ss_pred HHHHHHh
Q 021583 213 YEKLKKK 219 (310)
Q Consensus 213 a~~l~~~ 219 (310)
|...|++
T Consensus 80 A~~~~~~ 86 (117)
T 3k9i_A 80 GVELLLK 86 (117)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999876
No 168
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=97.43 E-value=0.0042 Score=45.24 Aligned_cols=90 Identities=13% Similarity=0.083 Sum_probs=73.3
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhcCCCCCh-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCC----HHHHHHHHH
Q 021583 128 LLLNALAEDGRLDEAEELWTKIFLDHLEGTP-RIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN----VSIVSMMGN 202 (310)
Q Consensus 128 ~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~-~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~----~~ty~~li~ 202 (310)
.+-..+...|++++|.+.|++..+..-..+. ...+..+-..|.+.|++++|...|+...+.. |+ ...+..+..
T Consensus 7 ~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~--p~~~~~~~~~~~la~ 84 (129)
T 2xev_A 7 NVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRY--PTHDKAAGGLLKLGL 84 (129)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTSTTHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHC--CCCcccHHHHHHHHH
Confidence 4556778899999999999999886432111 1478888899999999999999999988753 43 567888899
Q ss_pred HHHhcCCHHHHHHHHHh
Q 021583 203 AFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 203 ~~~~~g~~~~a~~l~~~ 219 (310)
+|...|++++|...|++
T Consensus 85 ~~~~~g~~~~A~~~~~~ 101 (129)
T 2xev_A 85 SQYGEGKNTEAQQTLQQ 101 (129)
T ss_dssp HHHHTTCHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHH
Confidence 99999999999999876
No 169
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.41 E-value=0.0042 Score=59.81 Aligned_cols=182 Identities=8% Similarity=-0.062 Sum_probs=124.8
Q ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCC---------CCCC------------HHHHHHHHHH
Q 021583 74 GALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKG---------QGRT------------MGTYFLLLNA 132 (310)
Q Consensus 74 ~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g---------~~p~------------~~ty~~ll~~ 132 (310)
.++++... .++.+...|-..+...-+.|++++|.++|+...+.. ..|+ ...|...++.
T Consensus 365 ~il~rAi~-~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~ 443 (679)
T 4e6h_A 365 KYLKLGQQ-CIPNSAVLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNT 443 (679)
T ss_dssp HHHHHHHH-HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-hCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHH
Confidence 66666654 234456667778888888999999999999987541 1142 3468888888
Q ss_pred HHhcCCHHHHHHHHHHHHhc-CCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHH
Q 021583 133 LAEDGRLDEAEELWTKIFLD-HLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211 (310)
Q Consensus 133 ~~~~g~~~~A~~~~~~m~~~-~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~ 211 (310)
..+.|.++.|.++|++..+. ...........+.+...+ .++.+.|.++|+...+. +.-+...|...+.-....|+.+
T Consensus 444 erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~-~~d~e~Ar~ife~~Lk~-~p~~~~~w~~y~~fe~~~~~~~ 521 (679)
T 4e6h_A 444 MKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHI-SKDTKTACKVLELGLKY-FATDGEYINKYLDFLIYVNEES 521 (679)
T ss_dssp HHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTT-TSCCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTCHH
T ss_pred HHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHH-CCCchHHHHHHHHHHHhCCCHH
Confidence 88899999999999998876 321122223333333222 35589999999998875 3335566678888888899999
Q ss_pred HHHHHHHhCCCCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhhcC
Q 021583 212 KYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNESS 266 (310)
Q Consensus 212 ~a~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~~~ 266 (310)
.|..+|++....... ..-...+|...++. ..|+.+.+..+..++...
T Consensus 522 ~AR~lferal~~~~~--------~~~~~~lw~~~~~fE~~~G~~~~~~~v~~R~~~~ 570 (679)
T 4e6h_A 522 QVKSLFESSIDKISD--------SHLLKMIFQKVIFFESKVGSLNSVRTLEKRFFEK 570 (679)
T ss_dssp HHHHHHHHHTTTSSS--------TTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC--------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 999999873211000 01234567777766 889999999988887653
No 170
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=97.38 E-value=0.0039 Score=52.97 Aligned_cols=94 Identities=12% Similarity=0.071 Sum_probs=82.4
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHH
Q 021583 122 TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP-NVSIVSMM 200 (310)
Q Consensus 122 ~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~l 200 (310)
+...+..+-..+.+.|++++|...|++..+..- .+...|..+-..|.+.|++++|.+.++...+. .| +...|..+
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p--~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~l 78 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNP--LVAVYYTNRALCYLKMQQPEQALADCRRALEL--DGQSVKAHFFL 78 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS--CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS--CTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--CCCCHHHHHHH
Confidence 467788888999999999999999999988743 45568999999999999999999999998764 45 57889999
Q ss_pred HHHHHhcCCHHHHHHHHHh
Q 021583 201 GNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 201 i~~~~~~g~~~~a~~l~~~ 219 (310)
..+|...|++++|...|++
T Consensus 79 g~~~~~~g~~~~A~~~~~~ 97 (281)
T 2c2l_A 79 GQCQLEMESYDEAIANLQR 97 (281)
T ss_dssp HHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHH
Confidence 9999999999999999976
No 171
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=97.36 E-value=0.0032 Score=50.11 Aligned_cols=120 Identities=15% Similarity=0.010 Sum_probs=84.2
Q ss_pred CcHHHHHHHHHHHHHcCC-CC---C-----------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q 021583 67 NVKEEVYGALDSFIAWEL-EF---P-----------LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLN 131 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~-~p---~-----------~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~ 131 (310)
+..+.|...+++..+..- .| . ...|..+-.+|.+.|++++|...++...+.. ..+...|..+-.
T Consensus 52 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg~ 130 (198)
T 2fbn_A 52 NEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKID-KNNVKALYKLGV 130 (198)
T ss_dssp TCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-cccHHHHHHHHH
Confidence 444555777777665421 11 1 2788888999999999999999999988662 456788999999
Q ss_pred HHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHCC
Q 021583 132 ALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMF-EIFADMEELG 189 (310)
Q Consensus 132 ~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~-~l~~~m~~~g 189 (310)
+|...|++++|.+.|++..+..- .+...+..+...+...++.+++. ..+..|...|
T Consensus 131 ~~~~~~~~~~A~~~~~~al~~~p--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~ 187 (198)
T 2fbn_A 131 ANMYFGFLEEAKENLYKAASLNP--NNLDIRNSYELCVNKLKEARKKDKLTFGGMFDKG 187 (198)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHST--TCHHHHHHHHHHHHHHHHHHC-------------
T ss_pred HHHHcccHHHHHHHHHHHHHHCC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999887742 44567888888888888777776 5566655443
No 172
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=97.36 E-value=0.0032 Score=48.36 Aligned_cols=98 Identities=15% Similarity=0.110 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHC-------C----------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSK-------G----------QGRTMGTYFLLLNALAEDGRLDEAEELWTKIF 150 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~-------g----------~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~ 150 (310)
...+...-..+.+.|++++|.+.|...... . -..+...|..+-.+|.+.|++++|...+++..
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 90 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVL 90 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 445667777777888888888888776543 0 01123566666667777777777777777666
Q ss_pred hcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 021583 151 LDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEE 187 (310)
Q Consensus 151 ~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~ 187 (310)
+.. |.+...|..+-.+|...|++++|...|+...+
T Consensus 91 ~~~--p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~ 125 (162)
T 3rkv_A 91 KRE--ETNEKALFRRAKARIAAWKLDEAEEDLKLLLR 125 (162)
T ss_dssp HHS--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hcC--CcchHHHHHHHHHHHHHhcHHHHHHHHHHHHh
Confidence 653 23344666677777777777777777766655
No 173
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=97.33 E-value=0.0012 Score=49.77 Aligned_cols=99 Identities=12% Similarity=-0.003 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHC----CCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC--CCCCh--H
Q 021583 89 ITVKKALKTLENEKDWKRIIQVTKWMLSK----GQGR-TMGTYFLLLNALAEDGRLDEAEELWTKIFLDH--LEGTP--R 159 (310)
Q Consensus 89 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~----g~~p-~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~--~~~~~--~ 159 (310)
.++..+-..|...|++++|.+.++..... +-.+ ...++..+-..+...|++++|.+.+++..+.. ....+ .
T Consensus 50 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 129 (164)
T 3ro3_A 50 IAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEG 129 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHH
Confidence 47888899999999999999999986633 1111 14677888889999999999999998876541 10111 2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 021583 160 IFFDKMISIYYNRGMHEKMFEIFADMEE 187 (310)
Q Consensus 160 ~~y~~li~~~~~~g~~~~a~~l~~~m~~ 187 (310)
.++..+-..|...|++++|.+.+++..+
T Consensus 130 ~~~~~la~~~~~~g~~~~A~~~~~~a~~ 157 (164)
T 3ro3_A 130 RACWSLGNAYTALGNHDQAMHFAEKHLE 157 (164)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 3788899999999999999999988654
No 174
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=97.33 E-value=0.0051 Score=47.16 Aligned_cols=94 Identities=16% Similarity=0.039 Sum_probs=66.7
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhc--------CC--------CCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 021583 125 TYFLLLNALAEDGRLDEAEELWTKIFLD--------HL--------EGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188 (310)
Q Consensus 125 ty~~ll~~~~~~g~~~~A~~~~~~m~~~--------~~--------~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~ 188 (310)
.+...-..+.+.|++++|...|.+..+. .- .+.....|..+-.+|.+.|++++|...++...+.
T Consensus 13 ~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~ 92 (162)
T 3rkv_A 13 ALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKR 92 (162)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Confidence 3455566777888888888888776664 00 1233457888888888888888888888877764
Q ss_pred CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 189 GVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 189 g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
. +-+...|..+..+|...|++++|...|++
T Consensus 93 ~-p~~~~a~~~~g~~~~~~g~~~~A~~~~~~ 122 (162)
T 3rkv_A 93 E-ETNEKALFRRAKARIAAWKLDEAEEDLKL 122 (162)
T ss_dssp S-TTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred C-CcchHHHHHHHHHHHHHhcHHHHHHHHHH
Confidence 2 22467778888888888888888888775
No 175
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=97.26 E-value=0.0015 Score=60.23 Aligned_cols=118 Identities=7% Similarity=-0.061 Sum_probs=88.8
Q ss_pred CcCchHhHHHHHHhcCCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q 021583 51 TISKSAKLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLL 130 (310)
Q Consensus 51 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll 130 (310)
.+.+.+++.+| ...+++..+.. +-+..+|..+-.+|.+.|++++|.+.++...+.. .-+..+|..+-
T Consensus 15 ~~~~~g~~~~A-----------~~~~~~Al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~-p~~~~~~~~lg 81 (477)
T 1wao_1 15 DYFKAKDYENA-----------IKFYSQAIELN-PSNAIYYGNRSLAYLRTECYGYALGDATRAIELD-KKYIKGYYRRA 81 (477)
T ss_dssp STTTTTCHHHH-----------HHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSC-TTCHHHHHHHH
T ss_pred HHHHhCCHHHH-----------HHHHHHHHHhC-CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCCHHHHHHHH
Confidence 34556666666 55566655543 3458899999999999999999999999988763 34678999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHH--HHHcCCHHHHHHHHH
Q 021583 131 NALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI--YYNRGMHEKMFEIFA 183 (310)
Q Consensus 131 ~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~--~~~~g~~~~a~~l~~ 183 (310)
.+|.+.|++++|++.|++..+..- .+...+..+-.+ +.+.|++++|.++++
T Consensus 82 ~~~~~~g~~~eA~~~~~~al~~~p--~~~~~~~~l~~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 82 ASNMALGKFRAALRDYETVVKVKP--HDKDAKMKYQECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHST--TCTTHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 999999999999999999988753 233456666555 888999999999988
No 176
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.18 E-value=0.0018 Score=59.00 Aligned_cols=86 Identities=8% Similarity=-0.020 Sum_probs=46.9
Q ss_pred cCCHHHHHHHHHHHHHC---CCCCC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHhc-----CCCCChH-HHHHHHHH
Q 021583 101 EKDWKRIIQVTKWMLSK---GQGRT----MGTYFLLLNALAEDGRLDEAEELWTKIFLD-----HLEGTPR-IFFDKMIS 167 (310)
Q Consensus 101 ~~~~~~a~~~~~~m~~~---g~~p~----~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~-----~~~~~~~-~~y~~li~ 167 (310)
.|++++|..++++..+. -+.|+ ..+++.|..+|...|++++|+.++++..+. |-.+++. .+||.|-.
T Consensus 311 ~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~ 390 (433)
T 3qww_A 311 YKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGR 390 (433)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 35566666666654421 11121 355666666666666666666666654432 3322332 25666666
Q ss_pred HHHHcCCHHHHHHHHHHHH
Q 021583 168 IYYNRGMHEKMFEIFADME 186 (310)
Q Consensus 168 ~~~~~g~~~~a~~l~~~m~ 186 (310)
.|...|++++|+.++++..
T Consensus 391 ~~~~qg~~~eA~~~~~~Al 409 (433)
T 3qww_A 391 LYMGLENKAAGEKALKKAI 409 (433)
T ss_dssp HHHHTTCHHHHHHHHHHHH
T ss_pred HHHhccCHHHHHHHHHHHH
Confidence 6666666666666666543
No 177
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.17 E-value=0.0036 Score=56.87 Aligned_cols=93 Identities=14% Similarity=0.144 Sum_probs=64.1
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHCC---CCC----CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc-----CCCCChH-H
Q 021583 94 ALKTLENEKDWKRIIQVTKWMLSKG---QGR----TMGTYFLLLNALAEDGRLDEAEELWTKIFLD-----HLEGTPR-I 160 (310)
Q Consensus 94 li~~~~~~~~~~~a~~~~~~m~~~g---~~p----~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~-----~~~~~~~-~ 160 (310)
.+..+.+.|++++|.++++...+.. +.| ...+++.|..+|...|++++|+.++++..+. |-.+++. .
T Consensus 293 ~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~ 372 (429)
T 3qwp_A 293 KIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGV 372 (429)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHH
T ss_pred HHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHH
Confidence 3555667788888888888776431 222 2567778888888888888888887766533 3333333 3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHH
Q 021583 161 FFDKMISIYYNRGMHEKMFEIFADME 186 (310)
Q Consensus 161 ~y~~li~~~~~~g~~~~a~~l~~~m~ 186 (310)
+|+.|-..|...|++++|+.++++..
T Consensus 373 ~l~nLa~~~~~~g~~~eA~~~~~~Al 398 (429)
T 3qwp_A 373 QVMKVGKLQLHQGMFPQAMKNLRLAF 398 (429)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 78888888888888888888777754
No 178
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.15 E-value=0.00092 Score=60.85 Aligned_cols=85 Identities=14% Similarity=-0.022 Sum_probs=68.0
Q ss_pred hcCCHHHHHHHHHHHHhc-----CCCCChH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHC-----C-CCCCH-HHHHHHH
Q 021583 135 EDGRLDEAEELWTKIFLD-----HLEGTPR-IFFDKMISIYYNRGMHEKMFEIFADMEEL-----G-VRPNV-SIVSMMG 201 (310)
Q Consensus 135 ~~g~~~~A~~~~~~m~~~-----~~~~~~~-~~y~~li~~~~~~g~~~~a~~l~~~m~~~-----g-~~p~~-~ty~~li 201 (310)
..|++++|+.++++..+. |-.+++. .+++.|...|...|++++|+.++++..+- | --|+. .+|+.|-
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 357899999999887654 3323333 38999999999999999999999997632 2 12443 8899999
Q ss_pred HHHHhcCCHHHHHHHHHh
Q 021583 202 NAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 202 ~~~~~~g~~~~a~~l~~~ 219 (310)
..|...|++++|+.++++
T Consensus 390 ~~~~~qg~~~eA~~~~~~ 407 (433)
T 3qww_A 390 RLYMGLENKAAGEKALKK 407 (433)
T ss_dssp HHHHHTTCHHHHHHHHHH
T ss_pred HHHHhccCHHHHHHHHHH
Confidence 999999999999999876
No 179
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.14 E-value=0.02 Score=51.15 Aligned_cols=130 Identities=11% Similarity=0.005 Sum_probs=95.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHC-CCCCCHH----HHHHHHHHHHhcCCHHHHHHHHHHHHhc----CCCCChHH
Q 021583 90 TVKKALKTLENEKDWKRIIQVTKWMLSK-GQGRTMG----TYFLLLNALAEDGRLDEAEELWTKIFLD----HLEGTPRI 160 (310)
Q Consensus 90 ~~~~li~~~~~~~~~~~a~~~~~~m~~~-g~~p~~~----ty~~ll~~~~~~g~~~~A~~~~~~m~~~----~~~~~~~~ 160 (310)
++..+...|.+.|++++|.+++...... +..++.. +.+.+-..+...|+.++|.+++++.... +....-..
T Consensus 57 al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 136 (434)
T 4b4t_Q 57 SILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHS 136 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHH
Confidence 5788999999999999999999987642 2222222 2223333334568899999998876643 32222234
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHC--C--CCCC-HHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 161 FFDKMISIYYNRGMHEKMFEIFADMEEL--G--VRPN-VSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 161 ~y~~li~~~~~~g~~~~a~~l~~~m~~~--g--~~p~-~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
++..|...|...|++++|..++.+.... + -.+. ..+|..++..|...|++++|..++++
T Consensus 137 ~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 200 (434)
T 4b4t_Q 137 LSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTA 200 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 8999999999999999999999987643 2 2232 46889999999999999999999875
No 180
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=97.02 E-value=0.024 Score=43.86 Aligned_cols=111 Identities=13% Similarity=-0.003 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCC-C-----CH-----HHHHHHHHHHHhcCCHHHHHHHHHHHHhc-----
Q 021583 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQG-R-----TM-----GTYFLLLNALAEDGRLDEAEELWTKIFLD----- 152 (310)
Q Consensus 89 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~-p-----~~-----~ty~~ll~~~~~~g~~~~A~~~~~~m~~~----- 152 (310)
..+...-..+.+.|++++|.+.|+...+..-. | +. ..|+.+-.++.+.|++++|+..+++..+.
T Consensus 12 ~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~ 91 (159)
T 2hr2_A 12 YLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRG 91 (159)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccc
Confidence 34556666777888999999888886644211 1 22 37777777888888888888888777765
Q ss_pred CCCCChHHHH----HHHHHHHHHcCCHHHHHHHHHHHHH-----CCCCCCHHHHHH
Q 021583 153 HLEGTPRIFF----DKMISIYYNRGMHEKMFEIFADMEE-----LGVRPNVSIVSM 199 (310)
Q Consensus 153 ~~~~~~~~~y----~~li~~~~~~g~~~~a~~l~~~m~~-----~g~~p~~~ty~~ 199 (310)
.+.|.+...| ...-.++...|++++|++.|+...+ .|+.+......-
T Consensus 92 e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~ 147 (159)
T 2hr2_A 92 ELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMME 147 (159)
T ss_dssp CTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHH
T ss_pred cCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 1122333466 7777777778888888777777643 355555443333
No 181
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=96.99 E-value=0.0026 Score=55.79 Aligned_cols=125 Identities=13% Similarity=0.030 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHH------------------HHHHHHHHHHhcCCHHHHHHHHHHHH
Q 021583 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMG------------------TYFLLLNALAEDGRLDEAEELWTKIF 150 (310)
Q Consensus 89 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~------------------ty~~ll~~~~~~g~~~~A~~~~~~m~ 150 (310)
..+..+-..+.+.|++++|...|+..... .|+.. .|..+-..|.+.|++++|+..+++..
T Consensus 180 ~~~~~~g~~~~~~g~~~~A~~~y~~Al~~--~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al 257 (338)
T 2if4_A 180 DRRKMDGNSLFKEEKLEEAMQQYEMAIAY--MGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVL 257 (338)
T ss_dssp HHHHHHHHHTCSSSCCHHHHHHHHHHHHH--SCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHH--hccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45667777788889999999999886654 24433 67777778888888888888888877
Q ss_pred hcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCC-HHHHHHHHHH-HHhcCCHHHHHHHHHh
Q 021583 151 LDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN-VSIVSMMGNA-FQKLGMLDKYEKLKKK 219 (310)
Q Consensus 151 ~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~-~~ty~~li~~-~~~~g~~~~a~~l~~~ 219 (310)
+.. +.+...|..+-.+|...|++++|.+.|+...+ +.|+ ...+..|... ....+..+++.++|++
T Consensus 258 ~~~--p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~--l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~ 324 (338)
T 2if4_A 258 TEE--EKNPKALFRRGKAKAELGQMDSARDDFRKAQK--YAPDDKAIRRELRALAEQEKALYQKQKEMYKG 324 (338)
T ss_dssp HHC--TTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC----------------------------------
T ss_pred HhC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 654 23445778888888888888888888877654 2343 3344444433 2234455555555544
No 182
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=96.98 E-value=0.093 Score=47.65 Aligned_cols=187 Identities=11% Similarity=0.045 Sum_probs=111.8
Q ss_pred cHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhc----CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH-H--HhcCCHH
Q 021583 68 VKEEVYGALDSFIAWELEFPLITVKKALKTLENE----KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNA-L--AEDGRLD 140 (310)
Q Consensus 68 ~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~----~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~-~--~~~g~~~ 140 (310)
..+++...+++..+.| .++...+..|-..|... +++++|.+.|+... .| +...+..|-.. | ...++.+
T Consensus 194 ~~~~A~~~~~~aa~~g-~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa-~g---~~~a~~~Lg~~~~~~~~~~d~~ 268 (452)
T 3e4b_A 194 QQAELLKQMEAGVSRG-TVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA-PG---YPASWVSLAQLLYDFPELGDVE 268 (452)
T ss_dssp HHHHHHHHHHHHHHTT-CSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG-GG---STHHHHHHHHHHHHSGGGCCHH
T ss_pred cHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc-CC---CHHHHHHHHHHHHhCCCCCCHH
Confidence 4455677777777766 44555545555666444 68888888888866 33 34445555444 3 3578888
Q ss_pred HHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHh----cCCHH
Q 021583 141 EAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG-----MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQK----LGMLD 211 (310)
Q Consensus 141 ~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g-----~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~----~g~~~ 211 (310)
+|.+.|++..+.|. ...+..|-..|. .| +.++|++.|+.-. .-+...+..|-..|.. ..+.+
T Consensus 269 ~A~~~~~~Aa~~g~----~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa----~g~~~A~~~Lg~~y~~G~g~~~d~~ 339 (452)
T 3e4b_A 269 QMMKYLDNGRAADQ----PRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV----GREVAADYYLGQIYRRGYLGKVYPQ 339 (452)
T ss_dssp HHHHHHHHHHHTTC----HHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT----TTCHHHHHHHHHHHHTTTTSSCCHH
T ss_pred HHHHHHHHHHHCCC----HHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh----CCCHHHHHHHHHHHHCCCCCCcCHH
Confidence 88888888887663 245666666665 45 8888888887755 3355666666666665 44888
Q ss_pred HHHHHHHhCCCCccchheeccCcccCChhh--hhHhhhc--cCCChhhHHhhhchhhcCCCCCchhhhhhhh
Q 021583 212 KYEKLKKKYPPPKWEYRYIKGKRVRIPAKP--KYELDSA--TEGKTNEVETTKNPNESSEEPEAAANLNESL 279 (310)
Q Consensus 212 ~a~~l~~~~~p~~~~~~~~~~~~~~~~~~~--~~~li~~--~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll 279 (310)
+|.++|++-- ..|. ++... ......+ ...+..+|..++..-...|.+.....+..+.
T Consensus 340 ~A~~~~~~Aa----------~~g~-~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~A~~~g~~~a~~~l~~l~ 400 (452)
T 3e4b_A 340 KALDHLLTAA----------RNGQ-NSADFAIAQLFSQGKGTKPDPLNAYVFSQLAKAQDTPEANDLATQLE 400 (452)
T ss_dssp HHHHHHHHHH----------TTTC-TTHHHHHHHHHHSCTTBCCCHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHH----------hhCh-HHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 8888876511 1111 11111 1111122 3456777777777776666554444444443
No 183
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=96.97 E-value=0.1 Score=47.38 Aligned_cols=167 Identities=12% Similarity=0.086 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHhcC---CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhc----CCHHHHHHHHHHHHhcCCCCChHHH
Q 021583 89 ITVKKALKTLENEK---DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAED----GRLDEAEELWTKIFLDHLEGTPRIF 161 (310)
Q Consensus 89 ~~~~~li~~~~~~~---~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~----g~~~~A~~~~~~m~~~~~~~~~~~~ 161 (310)
.++..|-..|.+.| ++++|.+.|+...+.| .++...+..|-..|... ++.++|.+.|++.. .+. + ..
T Consensus 177 ~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g-~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa-~g~--~--~a 250 (452)
T 3e4b_A 177 ICYVELATVYQKKQQPEQQAELLKQMEAGVSRG-TVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA-PGY--P--AS 250 (452)
T ss_dssp THHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTT-CSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG-GGS--T--HH
T ss_pred HHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc-CCC--H--HH
Confidence 37778888888899 8999999999988887 35555556666666554 78999999999988 443 2 34
Q ss_pred HHHHHHH-H--HHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcC-----CHHHHHHHHHhCCCCccchheeccC
Q 021583 162 FDKMISI-Y--YNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLG-----MLDKYEKLKKKYPPPKWEYRYIKGK 233 (310)
Q Consensus 162 y~~li~~-~--~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g-----~~~~a~~l~~~~~p~~~~~~~~~~~ 233 (310)
+..|-.. | ...++.++|++.|+...+.| +...+..|-..|. .| +.++|.++|++--+.
T Consensus 251 ~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g---~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa~g---------- 316 (452)
T 3e4b_A 251 WVSLAQLLYDFPELGDVEQMMKYLDNGRAAD---QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAVGR---------- 316 (452)
T ss_dssp HHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTTTT----------
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHhCC----------
Confidence 5555554 3 45899999999999988876 6677777777777 55 999999998773321
Q ss_pred cccCChhhhhHh----hhc--cCCChhhHHhhhchhhcCCCCCchhhhhhhh
Q 021583 234 RVRIPAKPKYEL----DSA--TEGKTNEVETTKNPNESSEEPEAAANLNESL 279 (310)
Q Consensus 234 ~~~~~~~~~~~l----i~~--~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll 279 (310)
+...+..| ..+ ...+.++|.+++..-...|.+.....+..++
T Consensus 317 ----~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~~A~~~Lg~~y 364 (452)
T 3e4b_A 317 ----EVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNGQNSADFAIAQLF 364 (452)
T ss_dssp ----CHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTTCTTHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhChHHHHHHHHHHH
Confidence 11111111 111 2347777777777666666554444444443
No 184
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=96.96 E-value=0.017 Score=38.87 Aligned_cols=62 Identities=19% Similarity=0.175 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q 021583 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD 152 (310)
Q Consensus 90 ~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~ 152 (310)
.+..+-..+.+.|++++|...|+...+.. ..+...+..+-..|.+.|++++|.+.|++..+.
T Consensus 11 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 11 AWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 44444455555555555555555544331 223444555555555555555555555555443
No 185
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=96.93 E-value=0.0065 Score=42.78 Aligned_cols=93 Identities=10% Similarity=-0.030 Sum_probs=71.1
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCCh------HH
Q 021583 87 PLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP------RI 160 (310)
Q Consensus 87 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~------~~ 160 (310)
+...+..+-..+.+.|++++|.+.|+...+.. +.+...+..+-..|.+.|++++|.+.|++..+..- .+ ..
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p--~~~~~~~~~~ 79 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQ-PQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTS--TAEHVAIRSK 79 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCS--STTSHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC--CccHHHHHHH
Confidence 45677888899999999999999999988652 44678899999999999999999999999987643 22 23
Q ss_pred HHHHHHHHHHHcCCHHHHHHHH
Q 021583 161 FFDKMISIYYNRGMHEKMFEIF 182 (310)
Q Consensus 161 ~y~~li~~~~~~g~~~~a~~l~ 182 (310)
.+..+-.++...|+.+.|.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~a~~~~ 101 (111)
T 2l6j_A 80 LQYRLELAQGAVGSVQIPVVEV 101 (111)
T ss_dssp HHHHHHHHHHHHHCCCCCSSSS
T ss_pred HHHHHHHHHHHHHhHhhhHhHH
Confidence 4555556666666655554433
No 186
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=96.92 E-value=0.0065 Score=55.18 Aligned_cols=91 Identities=14% Similarity=0.068 Sum_probs=72.1
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhcC-----CCCChH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHC-----C-CCCC-HH
Q 021583 129 LLNALAEDGRLDEAEELWTKIFLDH-----LEGTPR-IFFDKMISIYYNRGMHEKMFEIFADMEEL-----G-VRPN-VS 195 (310)
Q Consensus 129 ll~~~~~~g~~~~A~~~~~~m~~~~-----~~~~~~-~~y~~li~~~~~~g~~~~a~~l~~~m~~~-----g-~~p~-~~ 195 (310)
.+..+.+.|++++|++++++..+.. -.++.. .+++.|...|...|++++|+.++++..+- | --|+ ..
T Consensus 293 ~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~ 372 (429)
T 3qwp_A 293 KIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGV 372 (429)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHH
T ss_pred HHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHH
Confidence 3556778899999999999888652 212232 38999999999999999999999987632 2 1233 38
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 196 IVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 196 ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
+|+.|-..|...|++++|+.++++
T Consensus 373 ~l~nLa~~~~~~g~~~eA~~~~~~ 396 (429)
T 3qwp_A 373 QVMKVGKLQLHQGMFPQAMKNLRL 396 (429)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHH
Confidence 899999999999999999999876
No 187
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=96.92 E-value=0.019 Score=38.60 Aligned_cols=82 Identities=28% Similarity=0.363 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHH
Q 021583 123 MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP-NVSIVSMMG 201 (310)
Q Consensus 123 ~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p-~~~ty~~li 201 (310)
...+..+-..+...|++++|++.|++..+..- .+...|..+-..|.+.|++++|.+.+++..+.. | +...+..+-
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~--~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~--p~~~~~~~~l~ 84 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDP--NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD--PNNAEAKQNLG 84 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC--CCCHHHHHHHH
Confidence 46677788889999999999999999887653 445678899999999999999999999987643 4 456666666
Q ss_pred HHHHhcC
Q 021583 202 NAFQKLG 208 (310)
Q Consensus 202 ~~~~~~g 208 (310)
.++.+.|
T Consensus 85 ~~~~~~g 91 (91)
T 1na3_A 85 NAKQKQG 91 (91)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 6665543
No 188
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=96.91 E-value=0.011 Score=42.33 Aligned_cols=64 Identities=13% Similarity=0.093 Sum_probs=31.9
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 021583 87 PLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFL 151 (310)
Q Consensus 87 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~ 151 (310)
+...+..+-..|.+.|++++|...|+...... ..+...|..+-..|...|+.++|...|++..+
T Consensus 18 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 81 (115)
T 2kat_A 18 NMLLRFTLGKTYAEHEQFDAALPHLRAALDFD-PTYSVAWKWLGKTLQGQGDRAGARQAWESGLA 81 (115)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34445555555555555555555555544331 22344455555555555555555555554443
No 189
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=96.88 E-value=0.023 Score=43.96 Aligned_cols=96 Identities=9% Similarity=-0.081 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCC-----h-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHC-----
Q 021583 124 GTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGT-----P-----RIFFDKMISIYYNRGMHEKMFEIFADMEEL----- 188 (310)
Q Consensus 124 ~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~-----~-----~~~y~~li~~~~~~g~~~~a~~l~~~m~~~----- 188 (310)
..+...-..+.+.|++++|.+.|++..+..-..+ + ...|+.+-.++.+.|++++|+..++.-.+.
T Consensus 12 ~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~ 91 (159)
T 2hr2_A 12 YLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRG 91 (159)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccc
Confidence 4456667788899999999999998887643200 1 238999999999999999999999998763
Q ss_pred CCCCC-HHHH----HHHHHHHHhcCCHHHHHHHHHh
Q 021583 189 GVRPN-VSIV----SMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 189 g~~p~-~~ty----~~li~~~~~~g~~~~a~~l~~~ 219 (310)
-+.|+ ...| ...-.++...|++++|+..|++
T Consensus 92 e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~k 127 (159)
T 2hr2_A 92 ELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKK 127 (159)
T ss_dssp CTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHH
Confidence 22676 4677 8899999999999999999875
No 190
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.85 E-value=0.018 Score=51.40 Aligned_cols=164 Identities=10% Similarity=-0.043 Sum_probs=110.1
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHCCCCC-C---------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCCh
Q 021583 95 LKTLENEKDWKRIIQVTKWMLSKGQGR-T---------------MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTP 158 (310)
Q Consensus 95 i~~~~~~~~~~~a~~~~~~m~~~g~~p-~---------------~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~ 158 (310)
...+.+.|++++|.+.|....+..-.. + ..++..|...|.+.|++++|.+.+.++...--....
T Consensus 11 a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~ 90 (434)
T 4b4t_Q 11 ARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAK 90 (434)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCH
T ss_pred HHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccc
Confidence 345678899999999999988653221 1 134788999999999999999999987754221122
Q ss_pred H----HHHHHHHHHHHHcCCHHHHHHHHHHHHH----CCCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccchhe
Q 021583 159 R----IFFDKMISIYYNRGMHEKMFEIFADMEE----LGVRPN-VSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRY 229 (310)
Q Consensus 159 ~----~~y~~li~~~~~~g~~~~a~~l~~~m~~----~g~~p~-~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~~~ 229 (310)
. .+.+.+-..+...|+.++|.+++..... .+..+. ..++..|...|...|++++|..++++... .
T Consensus 91 ~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~------~ 164 (434)
T 4b4t_Q 91 SKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLR------E 164 (434)
T ss_dssp HHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH------H
T ss_pred hHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHH------H
Confidence 1 1333333444457889999999888753 344454 47888999999999999999999876210 0
Q ss_pred eccCc-ccCChhhhhHhhhc--cCCChhhHHhhhchhh
Q 021583 230 IKGKR-VRIPAKPKYELDSA--TEGKTNEVETTKNPNE 264 (310)
Q Consensus 230 ~~~~~-~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~ 264 (310)
..... -.....++..+... ..|++++|...++...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al 202 (434)
T 4b4t_Q 165 FKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAAR 202 (434)
T ss_dssp HTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 00000 01123344444444 8999999999886543
No 191
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=96.84 E-value=0.017 Score=41.32 Aligned_cols=98 Identities=15% Similarity=0.092 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 021583 106 RIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADM 185 (310)
Q Consensus 106 ~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m 185 (310)
.+.+.|+...+.. .-+...+..+-..|...|++++|++.|++..+..- .+...|..+-..|...|++++|...|+..
T Consensus 3 ~a~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p--~~~~~~~~la~~~~~~g~~~~A~~~~~~a 79 (115)
T 2kat_A 3 AITERLEAMLAQG-TDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDP--TYSVAWKWLGKTLQGQGDRAGARQAWESG 79 (115)
T ss_dssp CHHHHHHHHHTTT-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-CCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCC--CcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4566677666542 34678888999999999999999999999888753 44568999999999999999999999987
Q ss_pred HHCC-CCCCHHHHHHHHHHHHh
Q 021583 186 EELG-VRPNVSIVSMMGNAFQK 206 (310)
Q Consensus 186 ~~~g-~~p~~~ty~~li~~~~~ 206 (310)
.+.. -..+......+...+.+
T Consensus 80 l~~~~~~~~~~~~~~l~~~l~~ 101 (115)
T 2kat_A 80 LAAAQSRGDQQVVKELQVFLRR 101 (115)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHhccccccHHHHHHHHHHHHH
Confidence 6531 11344444444444433
No 192
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=96.75 E-value=0.02 Score=52.31 Aligned_cols=97 Identities=9% Similarity=0.028 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHH
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMIS 167 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~ 167 (310)
...|..+-.+|.+.|++++|...|+...+.. .-+...|..+-.+|...|++++|...|++..+.. |.+...|..+-.
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~--P~~~~a~~~l~~ 393 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLD-SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVN--PQNKAARLQISM 393 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC------CHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--CCCHHHHHHHHH
Confidence 5789999999999999999999999988763 3468899999999999999999999999998764 344458999999
Q ss_pred HHHHcCCHHHHHH-HHHHHHH
Q 021583 168 IYYNRGMHEKMFE-IFADMEE 187 (310)
Q Consensus 168 ~~~~~g~~~~a~~-l~~~m~~ 187 (310)
.+.+.++.+++.+ ++..|..
T Consensus 394 ~~~~~~~~~~a~~~~~~~~f~ 414 (457)
T 1kt0_A 394 CQKKAKEHNERDRRIYANMFK 414 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 9999999888764 4555543
No 193
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=96.73 E-value=0.044 Score=40.97 Aligned_cols=84 Identities=10% Similarity=-0.033 Sum_probs=36.6
Q ss_pred HHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHH--
Q 021583 98 LENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAE----DGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYN-- 171 (310)
Q Consensus 98 ~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~----~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~-- 171 (310)
|...+.+++|.+.|+...+.| +...+..|-..|.. .++.++|.+.|++..+.|. ...+..|-..|..
T Consensus 35 y~~g~~~~~A~~~~~~Aa~~g---~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~----~~a~~~Lg~~y~~G~ 107 (138)
T 1klx_A 35 SNSQINKQKLFQYLSKACELN---SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLND----QDGCLILGYKQYAGK 107 (138)
T ss_dssp TCTTSCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTC----HHHHHHHHHHHHHTS
T ss_pred HHcCCCHHHHHHHHHHHHcCC---CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcCCC----HHHHHHHHHHHHCCC
Confidence 333344444444444444432 33444444444444 4444555555544444432 1233444444444
Q ss_pred --cCCHHHHHHHHHHHHHC
Q 021583 172 --RGMHEKMFEIFADMEEL 188 (310)
Q Consensus 172 --~g~~~~a~~l~~~m~~~ 188 (310)
.++.++|.+.|+.-.+.
T Consensus 108 g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 108 GVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp SSCCCHHHHHHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHHC
Confidence 44444444444444443
No 194
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=96.73 E-value=0.017 Score=51.26 Aligned_cols=94 Identities=14% Similarity=0.052 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhc--------------CCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCC
Q 021583 124 GTYFLLLNALAEDGRLDEAEELWTKIFLD--------------HLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELG 189 (310)
Q Consensus 124 ~ty~~ll~~~~~~g~~~~A~~~~~~m~~~--------------~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g 189 (310)
..+..+-..|.+.|++++|.+.|++..+. ...+.....|+.+-.+|.+.|++++|++.++...+.
T Consensus 224 ~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~- 302 (370)
T 1ihg_A 224 EDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI- 302 (370)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh-
Confidence 45677888999999999999999988761 021233358999999999999999999999998874
Q ss_pred CCC-CHHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 190 VRP-NVSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 190 ~~p-~~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
.| +...|..+..+|...|++++|...|++
T Consensus 303 -~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~ 332 (370)
T 1ihg_A 303 -DPSNTKALYRRAQGWQGLKEYDQALADLKK 332 (370)
T ss_dssp -CTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred -CchhHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 35 578899999999999999999999876
No 195
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=96.69 E-value=0.012 Score=41.28 Aligned_cols=62 Identities=10% Similarity=0.040 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 021583 123 MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADME 186 (310)
Q Consensus 123 ~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~ 186 (310)
...+..+-..|.+.|++++|.+.|++..+..- .+...|..+-.+|...|++++|.+.|+...
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p--~~~~a~~~lg~~~~~~g~~~~A~~~~~~al 68 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVETDP--DYVGTYYHLGKLYERLDRTDDAIDTYAQGI 68 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST--TCTHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 44455555555555666666666655555432 222355555555556666666655555544
No 196
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=96.68 E-value=0.038 Score=47.03 Aligned_cols=122 Identities=11% Similarity=-0.014 Sum_probs=86.7
Q ss_pred CcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCC--HHHHHHHHHHHHhcCCHHHHHH
Q 021583 67 NVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRT--MGTYFLLLNALAEDGRLDEAEE 144 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~--~~ty~~ll~~~~~~g~~~~A~~ 144 (310)
+..++|.++|+.....+ |+....-.+-..+.+.+++++|+..|+...... .|. ...+..+-.++...|++++|++
T Consensus 116 g~y~eA~~~l~~~~~~~--p~~~~~~~~a~l~~~~~r~~dA~~~l~~a~~~~-d~~~~~~a~~~LG~al~~LG~~~eAl~ 192 (282)
T 4f3v_A 116 GNYADAMEALEAAPVAG--SEHLVAWMKAVVYGAAERWTDVIDQVKSAGKWP-DKFLAGAAGVAHGVAAANLALFTEAER 192 (282)
T ss_dssp TCHHHHHHHHTSSCCTT--CHHHHHHHHHHHHHHTTCHHHHHHHHTTGGGCS-CHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHHHHHhcC--CchHHHHHHHHHHHHcCCHHHHHHHHHHhhccC-CcccHHHHHHHHHHHHHHCCCHHHHHH
Confidence 34455567666655433 443355555668899999999999998443321 111 2467778889999999999999
Q ss_pred HHHHHHhcCCCCC-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCC
Q 021583 145 LWTKIFLDHLEGT-PRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN 193 (310)
Q Consensus 145 ~~~~m~~~~~~~~-~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~ 193 (310)
.|++.......|. ........-.++.+.|+.++|..+|+++... .|+
T Consensus 193 ~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~--~P~ 240 (282)
T 4f3v_A 193 RLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTT--HPE 240 (282)
T ss_dssp HHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--SCC
T ss_pred HHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--CCc
Confidence 9999875433122 2336777778889999999999999999874 355
No 197
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=96.56 E-value=0.09 Score=45.31 Aligned_cols=147 Identities=5% Similarity=-0.008 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHH--HHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCC------HH
Q 021583 69 KEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWK--RIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGR------LD 140 (310)
Q Consensus 69 ~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~--~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~------~~ 140 (310)
.++....++.+.+.. +-+..+|+.--..+.+.|+++ ++++.++.+.+.. .-|-.+|+.--..+.+.|+ ++
T Consensus 126 ~~~EL~~~~~~l~~~-pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d-~~N~sAW~~R~~ll~~l~~~~~~~~~~ 203 (306)
T 3dra_A 126 PYREFDILEAMLSSD-PKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTD-LKNNSAWSHRFFLLFSKKHLATDNTID 203 (306)
T ss_dssp THHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHSSGGGCCHHHHH
T ss_pred HHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHhccccchhhhHH
Confidence 344566666766655 557888888888888889888 9999999999774 4577788777666767676 89
Q ss_pred HHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHCC--CCCCHHHHHHHHHHHHhcCCHHHHHHHH
Q 021583 141 EAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEK-MFEIFADMEELG--VRPNVSIVSMMGNAFQKLGMLDKYEKLK 217 (310)
Q Consensus 141 ~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~-a~~l~~~m~~~g--~~p~~~ty~~li~~~~~~g~~~~a~~l~ 217 (310)
++++.++++.+... .+...|+-+-..+.+.|+... +..+.......+ -..+...+..+...|.+.|+.++|.+++
T Consensus 204 eEl~~~~~aI~~~p--~n~SaW~y~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~s~~al~~la~~~~~~~~~~~A~~~~ 281 (306)
T 3dra_A 204 EELNYVKDKIVKCP--QNPSTWNYLLGIHERFDRSITQLEEFSLQFVDLEKDQVTSSFALETLAKIYTQQKKYNESRTVY 281 (306)
T ss_dssp HHHHHHHHHHHHCS--SCHHHHHHHHHHHHHTTCCGGGGHHHHHTTEEGGGTEESCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--CCccHHHHHHHHHHhcCCChHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 99999999998865 677789999999988888544 556666655432 1347789999999999999999999998
Q ss_pred Hh
Q 021583 218 KK 219 (310)
Q Consensus 218 ~~ 219 (310)
+.
T Consensus 282 ~~ 283 (306)
T 3dra_A 282 DL 283 (306)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 198
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.52 E-value=0.059 Score=51.80 Aligned_cols=151 Identities=9% Similarity=-0.036 Sum_probs=111.5
Q ss_pred CcHHHHHHHHHHHHHcC---------CCCC------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHC-C-CCCCH
Q 021583 67 NVKEEVYGALDSFIAWE---------LEFP------------LITVKKALKTLENEKDWKRIIQVTKWMLSK-G-QGRTM 123 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~---------~~p~------------~~~~~~li~~~~~~~~~~~a~~~~~~m~~~-g-~~p~~ 123 (310)
+..++|..+++++.... -.|+ ...|...+....+.|+.+.|..+|....+. + ..+..
T Consensus 392 ~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~l 471 (679)
T 4e6h_A 392 TKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDI 471 (679)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHH
Confidence 45667888888876531 0132 236888888888899999999999998875 2 33444
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC--CHHHHHHHH
Q 021583 124 GTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP--NVSIVSMMG 201 (310)
Q Consensus 124 ~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p--~~~ty~~li 201 (310)
+...+.|.-.+ .++.+.|.++|+...+.- +.+...|...+......|+.+.|..+|+......-.+ ....|..++
T Consensus 472 yi~~A~lE~~~-~~d~e~Ar~ife~~Lk~~--p~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~ 548 (679)
T 4e6h_A 472 YLENAYIEYHI-SKDTKTACKVLELGLKYF--ATDGEYINKYLDFLIYVNEESQVKSLFESSIDKISDSHLLKMIFQKVI 548 (679)
T ss_dssp HHHHHHHHHTT-TSCCHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCCHHHHHHHHHHHHHHC--CCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 54444444222 356999999999988873 2444578888998889999999999999987654322 237888888
Q ss_pred HHHHhcCCHHHHHHHHHhC
Q 021583 202 NAFQKLGMLDKYEKLKKKY 220 (310)
Q Consensus 202 ~~~~~~g~~~~a~~l~~~~ 220 (310)
.--.+.|+.+.+.++.+++
T Consensus 549 ~fE~~~G~~~~~~~v~~R~ 567 (679)
T 4e6h_A 549 FFESKVGSLNSVRTLEKRF 567 (679)
T ss_dssp HHHHHTCCSHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHH
Confidence 8888999999999998763
No 199
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=96.48 E-value=0.016 Score=40.56 Aligned_cols=65 Identities=14% Similarity=0.111 Sum_probs=56.6
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q 021583 87 PLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD 152 (310)
Q Consensus 87 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~ 152 (310)
+...+..+-..|.+.|++++|...|+...+.. .-+...|..+-..|.+.|++++|.+.|++..+.
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l 70 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETD-PDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEV 70 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 56788899999999999999999999988663 335678999999999999999999999987764
No 200
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=96.21 E-value=0.034 Score=48.50 Aligned_cols=94 Identities=13% Similarity=-0.006 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChH-----------------HHHHHHHHHHHHcCCHHHHHHHHHHH
Q 021583 123 MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR-----------------IFFDKMISIYYNRGMHEKMFEIFADM 185 (310)
Q Consensus 123 ~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~-----------------~~y~~li~~~~~~g~~~~a~~l~~~m 185 (310)
...+..+-..+.+.|++++|...|++..+..- .+. ..|+.+-.+|.+.|++++|.+.++..
T Consensus 179 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p--~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~a 256 (338)
T 2if4_A 179 ADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMG--DDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIV 256 (338)
T ss_dssp HHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSC--HHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhc--cchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34566777888899999999999999776532 222 27899999999999999999999998
Q ss_pred HHCCCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHhC
Q 021583 186 EELGVRP-NVSIVSMMGNAFQKLGMLDKYEKLKKKY 220 (310)
Q Consensus 186 ~~~g~~p-~~~ty~~li~~~~~~g~~~~a~~l~~~~ 220 (310)
.+. .| +...|..+..+|...|++++|...|++.
T Consensus 257 l~~--~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~a 290 (338)
T 2if4_A 257 LTE--EEKNPKALFRRGKAKAELGQMDSARDDFRKA 290 (338)
T ss_dssp HHH--CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHT
T ss_pred HHh--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 874 35 6789999999999999999999999874
No 201
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.13 E-value=0.72 Score=42.39 Aligned_cols=170 Identities=11% Similarity=-0.002 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHH--------------------------
Q 021583 71 EVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMG-------------------------- 124 (310)
Q Consensus 71 ~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~-------------------------- 124 (310)
++..+++++.... +.+...|-..+..+.+.|+++.|.++|+..... +.+..
T Consensus 197 Rv~~~ye~al~~~-p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~--P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~ 273 (493)
T 2uy1_A 197 RMHFIHNYILDSF-YYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM--SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGE 273 (493)
T ss_dssp HHHHHHHHHHHHT-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CCSSHHHHHHHHHTTCTHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHcC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC--CCcHHHHHHHHhhcchhHHHHHHHHHHHhhc
Confidence 4556666666543 445677777788888889999999999987755 22211
Q ss_pred --------------HHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHH--HHHHHHHHcCCHHHHHHHHHHHHHC
Q 021583 125 --------------TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFD--KMISIYYNRGMHEKMFEIFADMEEL 188 (310)
Q Consensus 125 --------------ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~--~li~~~~~~g~~~~a~~l~~~m~~~ 188 (310)
.|...++.+-+.++++.|.++|++. +..- .+...|- +.+...+ .++.+.|.++|+...+.
T Consensus 274 ~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~--~~~~v~i~~A~lE~~~-~~d~~~ar~ife~al~~ 349 (493)
T 2uy1_A 274 AESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-GNEG--VGPHVFIYCAFIEYYA-TGSRATPYNIFSSGLLK 349 (493)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-TTSC--CCHHHHHHHHHHHHHH-HCCSHHHHHHHHHHHHH
T ss_pred cchhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-hCCC--CChHHHHHHHHHHHHH-CCChHHHHHHHHHHHHH
Confidence 1222222222344556666666655 2110 1111221 2222222 22466666666665543
Q ss_pred CCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccchheeccCcccCChhhhhHhhhc--cCCChhhHHhhhchhh
Q 021583 189 GVRPN-VSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSA--TEGKTNEVETTKNPNE 264 (310)
Q Consensus 189 g~~p~-~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~--~~g~~~~a~~~~~~m~ 264 (310)
. |+ ...+...++-..+.|+.+.|..+|++.. -....|...++- ..|+.+.+.+++++..
T Consensus 350 ~--~~~~~~~~~yid~e~~~~~~~~aR~l~er~~---------------k~~~lw~~~~~fE~~~G~~~~~r~v~~~~~ 411 (493)
T 2uy1_A 350 H--PDSTLLKEEFFLFLLRIGDEENARALFKRLE---------------KTSRMWDSMIEYEFMVGSMELFRELVDQKM 411 (493)
T ss_dssp C--TTCHHHHHHHHHHHHHHTCHHHHHHHHHHSC---------------CBHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred C--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 2 22 2233444444455566666666655531 134556666554 6677777766665443
No 202
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=96.06 E-value=0.29 Score=36.31 Aligned_cols=106 Identities=13% Similarity=-0.065 Sum_probs=86.9
Q ss_pred CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHH----cCCHHH
Q 021583 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYN----RGMHEK 177 (310)
Q Consensus 102 ~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~----~g~~~~ 177 (310)
+++++|.+.|+...+.| .++.. |-..|...+.+++|.+.|++..+.+. ...+..|-..|.. .++.++
T Consensus 9 ~d~~~A~~~~~~aa~~g-~~~a~----lg~~y~~g~~~~~A~~~~~~Aa~~g~----~~a~~~Lg~~y~~G~g~~~d~~~ 79 (138)
T 1klx_A 9 KDLKKAIQYYVKACELN-EMFGC----LSLVSNSQINKQKLFQYLSKACELNS----GNGCRFLGDFYENGKYVKKDLRK 79 (138)
T ss_dssp HHHHHHHHHHHHHHHTT-CTTHH----HHHHTCTTSCHHHHHHHHHHHHHTTC----HHHHHHHHHHHHHCSSSCCCHHH
T ss_pred cCHHHHHHHHHHHHcCC-CHhhh----HHHHHHcCCCHHHHHHHHHHHHcCCC----HHHHHHHHHHHHcCCCCCccHHH
Confidence 46889999999988887 34433 66667777889999999999988765 2567778888887 899999
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHh
Q 021583 178 MFEIFADMEELGVRPNVSIVSMMGNAFQK----LGMLDKYEKLKKK 219 (310)
Q Consensus 178 a~~l~~~m~~~g~~p~~~ty~~li~~~~~----~g~~~~a~~l~~~ 219 (310)
|++.|+.-.+.| +...+..|-..|.. .++.++|.++|++
T Consensus 80 A~~~~~~Aa~~g---~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~ 122 (138)
T 1klx_A 80 AAQYYSKACGLN---DQDGCLILGYKQYAGKGVVKNEKQAVKTFEK 122 (138)
T ss_dssp HHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCC---CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHH
Confidence 999999998865 56778888888888 8999999999975
No 203
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=95.97 E-value=0.37 Score=45.24 Aligned_cols=154 Identities=11% Similarity=-0.006 Sum_probs=117.6
Q ss_pred HHHhcCCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCC----------HHHHHHHHHHHHHCCCCCCHHHHHHHH
Q 021583 61 CIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKD----------WKRIIQVTKWMLSKGQGRTMGTYFLLL 130 (310)
Q Consensus 61 ~l~~~~~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~----------~~~a~~~~~~m~~~g~~p~~~ty~~ll 130 (310)
++.......++|...++++...+ +-+..+|+.--..+.+.|+ ++++++.++.+.+.. .-+..+|+.--
T Consensus 37 ~~~~~~~~~eeal~~~~~~l~~n-P~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~-pK~y~aW~hR~ 114 (567)
T 1dce_A 37 QKRQAGELDESVLELTSQILGAN-PDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVN-PKSYGTWHHRC 114 (567)
T ss_dssp HHHHTTCCSHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHC-TTCHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHHHHHHHC-chhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhC-CCCHHHHHHHH
Confidence 34444555667788888888776 3456677776666666666 999999999998763 45678888888
Q ss_pred HHHHhcC--CHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhc
Q 021583 131 NALAEDG--RLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG-MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207 (310)
Q Consensus 131 ~~~~~~g--~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g-~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~ 207 (310)
..+.+.| ++++++++++++.+... .+..+|+---..+.+.| ..+++.+.+..+.+.... |...|+.....+.+.
T Consensus 115 w~l~~l~~~~~~~el~~~~k~l~~d~--~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~-n~saW~~r~~ll~~l 191 (567)
T 1dce_A 115 WLLSRLPEPNWARELELCARFLEADE--RNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFS-NYSSWHYRSCLLPQL 191 (567)
T ss_dssp HHHHTCSSCCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCC-CHHHHHHHHHHHHHH
T ss_pred HHHHHcccccHHHHHHHHHHHHhhcc--ccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCC-CccHHHHHHHHHHhh
Confidence 8888888 77999999999999875 56678888888888888 899999999998775432 678888777777663
Q ss_pred --------------CCHHHHHHHHHh
Q 021583 208 --------------GMLDKYEKLKKK 219 (310)
Q Consensus 208 --------------g~~~~a~~l~~~ 219 (310)
+.++++.+.+++
T Consensus 192 ~~~~~~~~~~~~~~~~~~eel~~~~~ 217 (567)
T 1dce_A 192 HPQPDSGPQGRLPENVLLKELELVQN 217 (567)
T ss_dssp SCCCCSSSCCSSCHHHHHHHHHHHHH
T ss_pred cccccccccccccHHHHHHHHHHHHH
Confidence 556788777764
No 204
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=95.74 E-value=0.14 Score=45.17 Aligned_cols=151 Identities=7% Similarity=-0.029 Sum_probs=99.4
Q ss_pred cCCCCCHHHHHHHHHHHHh--cC---CHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHh---cC--CHHHH---HHHHH
Q 021583 82 WELEFPLITVKKALKTLEN--EK---DWKRIIQVTKWMLSKGQGRT-MGTYFLLLNALAE---DG--RLDEA---EELWT 147 (310)
Q Consensus 82 ~~~~p~~~~~~~li~~~~~--~~---~~~~a~~~~~~m~~~g~~p~-~~ty~~ll~~~~~---~g--~~~~A---~~~~~ 147 (310)
.+.+.+..+|...+.+... .+ ++.+|..+|++..+. .|+ ...|..+--+|.. .+ ..... ...++
T Consensus 188 ~~~p~~~~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~l--DP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~ 265 (372)
T 3ly7_A 188 KILPHRGALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQS--SPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEID 265 (372)
T ss_dssp HHSCSSGGGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHH
Confidence 3445567778887766543 23 357899999998866 465 3444443333321 11 11111 12222
Q ss_pred HHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHh---CCCCc
Q 021583 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK---YPPPK 224 (310)
Q Consensus 148 ~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~---~~p~~ 224 (310)
........+.+..+|.++-..+...|++++|...+++....+ |+...|..+-..+.-.|+.++|...|++ +.|..
T Consensus 266 a~~a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln--~s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~ 343 (372)
T 3ly7_A 266 NIVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLE--MSWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGA 343 (372)
T ss_dssp HHHTCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSH
T ss_pred HHHhcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 222222324555688888887888899999999999999876 8988888889999999999999999976 56776
Q ss_pred cchheeccCccc
Q 021583 225 WEYRYIKGKRVR 236 (310)
Q Consensus 225 ~~~~~~~~~~~~ 236 (310)
.+|.......+.
T Consensus 344 ~t~~~~~~l~F~ 355 (372)
T 3ly7_A 344 NTLYWIENGIFQ 355 (372)
T ss_dssp HHHHHHHHSSSC
T ss_pred ChHHHHhCceee
Confidence 666654444333
No 205
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=95.71 E-value=0.1 Score=35.77 Aligned_cols=55 Identities=15% Similarity=0.189 Sum_probs=29.6
Q ss_pred HHHHhcCCHHHHHHHHHHHHhcCCCCChHH-HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 021583 131 NALAEDGRLDEAEELWTKIFLDHLEGTPRI-FFDKMISIYYNRGMHEKMFEIFADMEE 187 (310)
Q Consensus 131 ~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~-~y~~li~~~~~~g~~~~a~~l~~~m~~ 187 (310)
..+.+.|++++|.+.|++..+..- .+.. .|..+-..|...|++++|.+.|+...+
T Consensus 8 ~~~~~~~~~~~A~~~~~~al~~~p--~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~ 63 (99)
T 2kc7_A 8 KELINQGDIENALQALEEFLQTEP--VGKDEAYYLMGNAYRKLGDWQKALNNYQSAIE 63 (99)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCS--STHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCC--CcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 344455556666666655555432 2333 555555555556666666666655554
No 206
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.53 E-value=0.17 Score=49.00 Aligned_cols=99 Identities=14% Similarity=0.041 Sum_probs=51.9
Q ss_pred HhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHH
Q 021583 99 ENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKM 178 (310)
Q Consensus 99 ~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a 178 (310)
...|+++.|.++.+. -.+...|..|-..+.+.|+++.|+++|.++.. |..+..-|...|+.+..
T Consensus 663 l~~~~~~~A~~~~~~------~~~~~~W~~la~~al~~~~~~~A~~~y~~~~d----------~~~l~~l~~~~~~~~~~ 726 (814)
T 3mkq_A 663 LKVGQLTLARDLLTD------ESAEMKWRALGDASLQRFNFKLAIEAFTNAHD----------LESLFLLHSSFNNKEGL 726 (814)
T ss_dssp HHHTCHHHHHHHHTT------CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTC----------HHHHHHHHHHTTCHHHH
T ss_pred hhcCCHHHHHHHHHh------hCcHhHHHHHHHHHHHcCCHHHHHHHHHHccC----------hhhhHHHHHHcCCHHHH
Confidence 344555555554322 13445666666666666666666666665432 33444444445555555
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 179 FEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 179 ~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
.++.+.....|- |+....+|.+.|++++|.+++.+
T Consensus 727 ~~~~~~a~~~~~------~~~A~~~~~~~g~~~~a~~~~~~ 761 (814)
T 3mkq_A 727 VTLAKDAETTGK------FNLAFNAYWIAGDIQGAKDLLIK 761 (814)
T ss_dssp HHHHHHHHHTTC------HHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCc------hHHHHHHHHHcCCHHHHHHHHHH
Confidence 555444444332 23444445556666666666544
No 207
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=95.46 E-value=0.068 Score=41.20 Aligned_cols=98 Identities=10% Similarity=-0.034 Sum_probs=61.4
Q ss_pred hcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCC----------HHHHHHHHHHHHhcCCCCChHHHHHHHHHHH
Q 021583 100 NEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGR----------LDEAEELWTKIFLDHLEGTPRIFFDKMISIY 169 (310)
Q Consensus 100 ~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~----------~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~ 169 (310)
+.+++++|.+.++...+.. .-+...|+.+-.++...++ +++|...|++..+..- .....|..+=.+|
T Consensus 14 r~~~feeA~~~~~~Ai~l~-P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP--~~~~A~~~LG~ay 90 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSN-PLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDP--KKDEAVWCIGNAY 90 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCT--TCHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCc--CcHHHHHHHHHHH
Confidence 4445666666666655442 3355666666556665554 4578888887777642 3445777777777
Q ss_pred HHcC-----------CHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q 021583 170 YNRG-----------MHEKMFEIFADMEELGVRPNVSIVSMMGN 202 (310)
Q Consensus 170 ~~~g-----------~~~~a~~l~~~m~~~g~~p~~~ty~~li~ 202 (310)
...| ++++|.+.|+...+ +.|+...|...+.
T Consensus 91 ~~lg~l~P~~~~a~g~~~eA~~~~~kAl~--l~P~~~~y~~al~ 132 (158)
T 1zu2_A 91 TSFAFLTPDETEAKHNFDLATQFFQQAVD--EQPDNTHYLKSLE 132 (158)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHH--HCTTCHHHHHHHH
T ss_pred HHhcccCcchhhhhccHHHHHHHHHHHHH--hCCCCHHHHHHHH
Confidence 7664 78888888877766 4576655554444
No 208
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=95.14 E-value=0.43 Score=32.40 Aligned_cols=60 Identities=20% Similarity=0.205 Sum_probs=50.2
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHCCCCCCHH-HHHHHHHHHHhcCCHHHHHHHHHHHHhcCC
Q 021583 94 ALKTLENEKDWKRIIQVTKWMLSKGQGRTMG-TYFLLLNALAEDGRLDEAEELWTKIFLDHL 154 (310)
Q Consensus 94 li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~-ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~ 154 (310)
....+.+.|++++|.+.|+...+.. .-+.. .+..+-..|...|++++|.+.|++..+..-
T Consensus 6 ~a~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p 66 (99)
T 2kc7_A 6 TIKELINQGDIENALQALEEFLQTE-PVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNP 66 (99)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHC-SSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 3456778999999999999988663 33556 888899999999999999999999988754
No 209
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=95.12 E-value=1.4 Score=37.75 Aligned_cols=153 Identities=7% Similarity=-0.062 Sum_probs=102.3
Q ss_pred HHhcCCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH----Hh
Q 021583 62 IKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEK--DWKRIIQVTKWMLSKGQGRTMGTYFLLLNAL----AE 135 (310)
Q Consensus 62 l~~~~~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~--~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~----~~ 135 (310)
+.......++|....+.+...+ +-+...|+.--..+...+ ++++++++++.+....- -+..+|+.--..+ ..
T Consensus 42 ~~~~~e~s~~aL~~t~~~L~~n-P~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nP-k~y~aW~~R~~iL~~~~~~ 119 (306)
T 3dra_A 42 LMKAEEYSERALHITELGINEL-ASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNE-KNYQIWNYRQLIIGQIMEL 119 (306)
T ss_dssp HHHTTCCSHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCT-TCCHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHHHC-cHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHh
Confidence 3334444456677777777666 334566777777777777 88899999988876532 2233343332222 33
Q ss_pred c---CCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCC-
Q 021583 136 D---GRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHE--KMFEIFADMEELGVRPNVSIVSMMGNAFQKLGM- 209 (310)
Q Consensus 136 ~---g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~--~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~- 209 (310)
. +++++++++++++.+..- .+-.+|+----.+.+.|.++ ++++.++.+.+.... |...|+.-...+.+.|.
T Consensus 120 l~~~~~~~~EL~~~~~~l~~~p--kny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~-N~sAW~~R~~ll~~l~~~ 196 (306)
T 3dra_A 120 NNNDFDPYREFDILEAMLSSDP--KNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLK-NNSAWSHRFFLLFSKKHL 196 (306)
T ss_dssp TTTCCCTHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHSSGGG
T ss_pred ccccCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHhcccc
Confidence 4 778888899888888753 45557777777777788887 888888888876543 66777766666666665
Q ss_pred -----HHHHHHHHHh
Q 021583 210 -----LDKYEKLKKK 219 (310)
Q Consensus 210 -----~~~a~~l~~~ 219 (310)
++++++.+++
T Consensus 197 ~~~~~~~eEl~~~~~ 211 (306)
T 3dra_A 197 ATDNTIDEELNYVKD 211 (306)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred chhhhHHHHHHHHHH
Confidence 6777777653
No 210
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=95.01 E-value=0.05 Score=41.96 Aligned_cols=91 Identities=10% Similarity=0.109 Sum_probs=70.6
Q ss_pred HhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHCCCCCC-HHHHHHHHH
Q 021583 134 AEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMH----------EKMFEIFADMEELGVRPN-VSIVSMMGN 202 (310)
Q Consensus 134 ~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~----------~~a~~l~~~m~~~g~~p~-~~ty~~li~ 202 (310)
.+.+.+++|.+.+++..+.. |.+...|+.+=.++...+++ ++|+..|++..+ +.|+ ...|..+-.
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~--P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~--ldP~~~~A~~~LG~ 88 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSN--PLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALL--IDPKKDEAVWCIGN 88 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH--HCTTCHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHH--hCcCcHHHHHHHHH
Confidence 45567899999999988875 34556788887788877764 589999998877 4564 688999999
Q ss_pred HHHhcC-----------CHHHHHHHHHh---CCCCccchh
Q 021583 203 AFQKLG-----------MLDKYEKLKKK---YPPPKWEYR 228 (310)
Q Consensus 203 ~~~~~g-----------~~~~a~~l~~~---~~p~~~~~~ 228 (310)
+|...| ++++|.+.|++ +.|+...|.
T Consensus 89 ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~ 128 (158)
T 1zu2_A 89 AYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYL 128 (158)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHH
Confidence 998874 89999999986 567655444
No 211
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=94.96 E-value=1.7 Score=37.95 Aligned_cols=157 Identities=9% Similarity=-0.052 Sum_probs=115.6
Q ss_pred HHHHHHhcCCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhc
Q 021583 58 LVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEK-DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAED 136 (310)
Q Consensus 58 ~~~~l~~~~~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~-~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~ 136 (310)
+..++.......++|....+++...+ +-+..+|+.--..+...| .+++++++++.+.... .-+..+|+.--..+.+.
T Consensus 59 ~~r~~~~~~e~se~AL~lt~~~L~~n-P~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~n-PKny~aW~hR~wlL~~l 136 (349)
T 3q7a_A 59 YFRAIAAKEEKSERALELTEIIVRMN-PAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQN-LKSYQVWHHRLLLLDRI 136 (349)
T ss_dssp HHHHHHHTTCCSHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTT-CCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHhC-chhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHh
Confidence 33444444455566788888888777 445677888777777788 5999999999998763 44667777776666666
Q ss_pred -C-CHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHH--------HHHHHHHHHHHCCCCCCHHHHHHHHHHHHh
Q 021583 137 -G-RLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHE--------KMFEIFADMEELGVRPNVSIVSMMGNAFQK 206 (310)
Q Consensus 137 -g-~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~--------~a~~l~~~m~~~g~~p~~~ty~~li~~~~~ 206 (310)
+ +.++++++++++.+..- .+-.+|+----.+.+.|.++ ++++.++.+.+.... |...|+..-..+.+
T Consensus 137 ~~~~~~~EL~~~~k~L~~dp--kNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~-N~SAW~~R~~lL~~ 213 (349)
T 3q7a_A 137 SPQDPVSEIEYIHGSLLPDP--KNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGR-NNSAWGWRWYLRVS 213 (349)
T ss_dssp CCSCCHHHHHHHHHHTSSCT--TCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHTT
T ss_pred cCCChHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHh
Confidence 6 88999999999998754 55567776666666666666 899999999886543 77888888888877
Q ss_pred cCC-------HHHHHHHHHh
Q 021583 207 LGM-------LDKYEKLKKK 219 (310)
Q Consensus 207 ~g~-------~~~a~~l~~~ 219 (310)
.+. ++++++.+++
T Consensus 214 l~~~~~~~~~~~eELe~~~~ 233 (349)
T 3q7a_A 214 RPGAETSSRSLQDELIYILK 233 (349)
T ss_dssp STTCCCCHHHHHHHHHHHHH
T ss_pred ccccccchHHHHHHHHHHHH
Confidence 776 6777777654
No 212
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=94.65 E-value=0.67 Score=42.60 Aligned_cols=121 Identities=11% Similarity=0.168 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHH--HHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHH
Q 021583 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYF--LLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMI 166 (310)
Q Consensus 89 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~--~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li 166 (310)
..|...+....+.++++.|..+|+.. ... ..+...|. +.+.... .++.+.|.++|+...+... .....|...+
T Consensus 287 ~lw~~y~~~~~r~~~~~~AR~i~~~A-~~~-~~~~~v~i~~A~lE~~~-~~d~~~ar~ife~al~~~~--~~~~~~~~yi 361 (493)
T 2uy1_A 287 LLRINHLNYVLKKRGLELFRKLFIEL-GNE-GVGPHVFIYCAFIEYYA-TGSRATPYNIFSSGLLKHP--DSTLLKEEFF 361 (493)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHH-TTS-CCCHHHHHHHHHHHHHH-HCCSHHHHHHHHHHHHHCT--TCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh-hCC-CCChHHHHHHHHHHHHH-CCChHHHHHHHHHHHHHCC--CCHHHHHHHH
Confidence 34556666666778899999999988 221 12444443 3333332 2379999999999888643 2223567778
Q ss_pred HHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 167 ~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
....+.|+.+.|..+|+... -....|...+.-=...|+.+.+..++++
T Consensus 362 d~e~~~~~~~~aR~l~er~~-----k~~~lw~~~~~fE~~~G~~~~~r~v~~~ 409 (493)
T 2uy1_A 362 LFLLRIGDEENARALFKRLE-----KTSRMWDSMIEYEFMVGSMELFRELVDQ 409 (493)
T ss_dssp HHHHHHTCHHHHHHHHHHSC-----CBHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 88889999999999999962 2567788888877788999999998876
No 213
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=94.30 E-value=1.5 Score=34.28 Aligned_cols=100 Identities=13% Similarity=0.045 Sum_probs=60.1
Q ss_pred HHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHH
Q 021583 98 LENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEK 177 (310)
Q Consensus 98 ~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~ 177 (310)
..+.|+++.|.++.+.+ -+...|..|-+.....|+++-|+++|.+... |..|.--|.-.|+.++
T Consensus 15 AL~lg~l~~A~e~a~~l------~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D----------~~~L~~Ly~~tg~~e~ 78 (177)
T 3mkq_B 15 ALEYGNLDAALDEAKKL------NDSITWERLIQEALAQGNASLAEMIYQTQHS----------FDKLSFLYLVTGDVNK 78 (177)
T ss_dssp HHHTTCHHHHHHHHHHH------CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTC----------HHHHHHHHHHHTCHHH
T ss_pred HHhcCCHHHHHHHHHHh------CCHHHHHHHHHHHHHcCChHHHHHHHHHhCC----------HHHHHHHHHHhCCHHH
Confidence 34567777777766554 3456777777777777777777777766442 4444444555666666
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 178 MFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 178 a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
..++-+.-...|- ++....++.-.|+++++.++|.+
T Consensus 79 L~kla~iA~~~g~------~n~af~~~l~lGdv~~~i~lL~~ 114 (177)
T 3mkq_B 79 LSKMQNIAQTRED------FGSMLLNTFYNNSTKERSSIFAE 114 (177)
T ss_dssp HHHHHHHHHHTTC------HHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHCcc------HHHHHHHHHHcCCHHHHHHHHHH
Confidence 5555444444331 45555556666677776666544
No 214
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=93.84 E-value=0.7 Score=35.17 Aligned_cols=86 Identities=12% Similarity=0.065 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcC---CHHHHHHHHHHHHhcCCCC-ChHHHHHHHHHHHHHcCCHHHHH
Q 021583 104 WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDG---RLDEAEELWTKIFLDHLEG-TPRIFFDKMISIYYNRGMHEKMF 179 (310)
Q Consensus 104 ~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g---~~~~A~~~~~~m~~~~~~~-~~~~~y~~li~~~~~~g~~~~a~ 179 (310)
...+.+-|++..+.|. ++..+.-.+-.++++.+ +++++..+|++..+... | .+...+=.|--+|.+.|++++|.
T Consensus 14 l~~~~~~y~~e~~~~~-~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~-p~~~rd~lY~LAv~~~kl~~Y~~A~ 91 (152)
T 1pc2_A 14 LLKFEKKFQSEKAAGS-VSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGS-KEEQRDYVFYLAVGNYRLKEYEKAL 91 (152)
T ss_dssp HHHHHHHHHHHHHTTC-CCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSC-HHHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHHHHccCC-CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCC-ccchHHHHHHHHHHHHHccCHHHHH
Confidence 3445555665555443 67777777777777777 56678888887777642 1 11223444455567788888888
Q ss_pred HHHHHHHHCCCCCC
Q 021583 180 EIFADMEELGVRPN 193 (310)
Q Consensus 180 ~l~~~m~~~g~~p~ 193 (310)
+.++...+ +.|+
T Consensus 92 ~y~~~lL~--ieP~ 103 (152)
T 1pc2_A 92 KYVRGLLQ--TEPQ 103 (152)
T ss_dssp HHHHHHHH--HCTT
T ss_pred HHHHHHHh--cCCC
Confidence 88888776 3563
No 215
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=93.81 E-value=0.59 Score=32.67 Aligned_cols=65 Identities=18% Similarity=0.013 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHCC------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q 021583 88 LITVKKALKTLENEKDWKRIIQVTKWMLSKG------QGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD 152 (310)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g------~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~ 152 (310)
..-+..|-..+.+.+++..|...|+...+.- -.+....+..|..+|.+.|++++|...+++..+.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL 75 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 3344455555555556666655555543220 1123344455555555555555555555555443
No 216
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=93.21 E-value=1.1 Score=31.24 Aligned_cols=72 Identities=14% Similarity=0.087 Sum_probs=55.7
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC-----CCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCH
Q 021583 121 RTMGTYFLLLNALAEDGRLDEAEELWTKIFLDH-----LEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNV 194 (310)
Q Consensus 121 p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~-----~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~ 194 (310)
.+...+-.|-..+.+.|+++.|...|++..+.. ........|..|-.+|.+.|++++|..++++..+ ..|+.
T Consensus 3 Lsa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~--l~P~~ 79 (104)
T 2v5f_A 3 LTAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLE--LDPEH 79 (104)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HCTTC
T ss_pred CCHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHh--cCCCC
Confidence 455667788889999999999999998766541 1113345899999999999999999999999876 35654
No 217
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=92.35 E-value=0.8 Score=40.67 Aligned_cols=108 Identities=12% Similarity=0.136 Sum_probs=78.9
Q ss_pred CHHHHHHHHHHHH---hcCCHHHHHHHHHHHHHC--C-CCCCH------------------HHHHHHHHHHHhcCCHHHH
Q 021583 87 PLITVKKALKTLE---NEKDWKRIIQVTKWMLSK--G-QGRTM------------------GTYFLLLNALAEDGRLDEA 142 (310)
Q Consensus 87 ~~~~~~~li~~~~---~~~~~~~a~~~~~~m~~~--g-~~p~~------------------~ty~~ll~~~~~~g~~~~A 142 (310)
|...|..++..-. ..|+.+.+.+.+...... | .-++. .+...++..+...|+.++|
T Consensus 111 D~~~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a 190 (388)
T 2ff4_A 111 DLGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAV 190 (388)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred hHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
Confidence 4555666665443 357888888888776533 2 11111 1223456777889999999
Q ss_pred HHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----CCCCCCHHH
Q 021583 143 EELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEE-----LGVRPNVSI 196 (310)
Q Consensus 143 ~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~-----~g~~p~~~t 196 (310)
...+..+.... |.+...|-.+|.+|.+.|+..+|.+.|+...+ -|+.|+..+
T Consensus 191 ~~~l~~~~~~~--P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~~l 247 (388)
T 2ff4_A 191 IAELEALTFEH--PYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTL 247 (388)
T ss_dssp HHHHHHHHHHS--TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCHHH
T ss_pred HHHHHHHHHhC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCHHH
Confidence 99999988764 57777999999999999999999999998753 499999865
No 218
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.19 E-value=1.6 Score=29.97 Aligned_cols=65 Identities=8% Similarity=-0.063 Sum_probs=36.3
Q ss_pred CHHHHHHHHHHHHhcCC---HHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 021583 122 TMGTYFLLLNALAEDGR---LDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL 188 (310)
Q Consensus 122 ~~~ty~~ll~~~~~~g~---~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~ 188 (310)
|...+..+-.++...++ .++|..+|++..+.. |.+......+-..+.+.|++++|...|+.+.+.
T Consensus 5 ~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~d--p~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~ 72 (93)
T 3bee_A 5 TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLE--PYNEAALSLIANDHFISFRFQEAIDTWVLLLDS 72 (93)
T ss_dssp CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHC--cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 44455555555543333 466666666666553 233345555556666666666666666666654
No 219
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.06 E-value=1.8 Score=41.74 Aligned_cols=84 Identities=8% Similarity=-0.042 Sum_probs=62.4
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHH
Q 021583 86 FPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKM 165 (310)
Q Consensus 86 p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~l 165 (310)
.+...|..+-..+.+.++++.|.+.|..+.. |..+...|...|+.+...++-+.....|. |+.-
T Consensus 679 ~~~~~W~~la~~al~~~~~~~A~~~y~~~~d---------~~~l~~l~~~~~~~~~~~~~~~~a~~~~~-------~~~A 742 (814)
T 3mkq_A 679 SAEMKWRALGDASLQRFNFKLAIEAFTNAHD---------LESLFLLHSSFNNKEGLVTLAKDAETTGK-------FNLA 742 (814)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTC---------HHHHHHHHHHTTCHHHHHHHHHHHHHTTC-------HHHH
T ss_pred CcHhHHHHHHHHHHHcCCHHHHHHHHHHccC---------hhhhHHHHHHcCCHHHHHHHHHHHHHcCc-------hHHH
Confidence 4678999999999999999999999998754 35666667777888777777666666554 4444
Q ss_pred HHHHHHcCCHHHHHHHHHHH
Q 021583 166 ISIYYNRGMHEKMFEIFADM 185 (310)
Q Consensus 166 i~~~~~~g~~~~a~~l~~~m 185 (310)
...|.+.|++++|++++.++
T Consensus 743 ~~~~~~~g~~~~a~~~~~~~ 762 (814)
T 3mkq_A 743 FNAYWIAGDIQGAKDLLIKS 762 (814)
T ss_dssp HHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHHc
Confidence 55566677777777776654
No 220
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=91.59 E-value=6.2 Score=34.09 Aligned_cols=144 Identities=12% Similarity=0.026 Sum_probs=105.5
Q ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCC-HHHHHHHH
Q 021583 70 EEVYGALDSFIAWELEFPLITVKKALKTLENEK--DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGR-LDEAEELW 146 (310)
Q Consensus 70 ~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~--~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~-~~~A~~~~ 146 (310)
+.....++.+...+ +-+..+|+.--..+.+.+ .+++++++++.+.+.. .-|-.+|+----.+...|. ++++++.+
T Consensus 91 ~~EL~~~~~~L~~~-PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~d-prNy~AW~~R~~vl~~l~~~~~eel~~~ 168 (331)
T 3dss_A 91 KAELGFLESCLRVN-PKSYGTWHHRCWLLSRLPEPNWARELELCARFLEAD-ERNFHCWDYRRFVAAQAAVAPAEELAFT 168 (331)
T ss_dssp HHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-CCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 34466666666655 457888888888888888 4899999999999764 5677888887777778888 69999999
Q ss_pred HHHHhcCCCCChHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhc----
Q 021583 147 TKIFLDHLEGTPRIFFDKMISIYYNR--------------GMHEKMFEIFADMEELGVRP-NVSIVSMMGNAFQKL---- 207 (310)
Q Consensus 147 ~~m~~~~~~~~~~~~y~~li~~~~~~--------------g~~~~a~~l~~~m~~~g~~p-~~~ty~~li~~~~~~---- 207 (310)
+++.+.+. .+...|+..-..+.+. +.++++++.+...... .| |...|+-+--.+.+.
T Consensus 169 ~~~I~~~p--~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~--~P~d~SaW~Y~r~ll~~~~~~~ 244 (331)
T 3dss_A 169 DSLITRNF--SNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFT--DPNDQSAWFYHRWLLGAGSGRC 244 (331)
T ss_dssp HHHHHHCS--CCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHH--STTCHHHHHHHHHHHHSSSCGG
T ss_pred HHHHHHCC--CCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHhccCcc
Confidence 99999875 5666788777666655 4577888888887764 35 567776554444444
Q ss_pred -------CCHHHHHHHHHh
Q 021583 208 -------GMLDKYEKLKKK 219 (310)
Q Consensus 208 -------g~~~~a~~l~~~ 219 (310)
+.++++.+.+++
T Consensus 245 ~~~~~~~~~l~~el~~~~e 263 (331)
T 3dss_A 245 ELSVEKSTVLQSELESCKE 263 (331)
T ss_dssp GCCHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHH
Confidence 456777777665
No 221
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=91.18 E-value=6.9 Score=33.82 Aligned_cols=151 Identities=11% Similarity=0.003 Sum_probs=107.3
Q ss_pred hcCCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCC----------HHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q 021583 64 GLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKD----------WKRIIQVTKWMLSKGQGRTMGTYFLLLNAL 133 (310)
Q Consensus 64 ~~~~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~----------~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~ 133 (310)
......++|....+.+...+ +-+..+|+.--..+...+. +++++.+++.+.... +-+..+|+.--..+
T Consensus 41 ~~~e~s~eaL~~t~~~L~~n-P~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~-PKny~aW~hR~wlL 118 (331)
T 3dss_A 41 QAGELDESVLELTSQILGAN-PDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVN-PKSYGTWHHRCWLL 118 (331)
T ss_dssp HTTCCSHHHHHHHHHHHTTC-TTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC-TTCHHHHHHHHHHH
T ss_pred HcCCCCHHHHHHHHHHHHHC-chhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHH
Confidence 33445556778888877766 3344556554444433332 678899999888653 45677787777777
Q ss_pred HhcC--CHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhc---
Q 021583 134 AEDG--RLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGM-HEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL--- 207 (310)
Q Consensus 134 ~~~g--~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~-~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~--- 207 (310)
.+.| ++++++++++++.+... .+-.+|+----.+.+.|. .+++++.+..+.+.... |...|+.....+.+.
T Consensus 119 ~~l~~~~~~~EL~~~~k~l~~dp--rNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~-N~SAW~~R~~ll~~l~~~ 195 (331)
T 3dss_A 119 SRLPEPNWARELELCARFLEADE--RNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFS-NYSSWHYRSCLLPQLHPQ 195 (331)
T ss_dssp HHCSSCCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHHSCC
T ss_pred hccCcccHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHhhhc
Confidence 7777 48999999999999865 566688877777778888 59999999999986543 677777776666655
Q ss_pred -----------CCHHHHHHHHHh
Q 021583 208 -----------GMLDKYEKLKKK 219 (310)
Q Consensus 208 -----------g~~~~a~~l~~~ 219 (310)
+.++++++.+++
T Consensus 196 ~~~~~~~~~~~~~~~eEle~~~~ 218 (331)
T 3dss_A 196 PDSGPQGRLPENVLLKELELVQN 218 (331)
T ss_dssp C------CCCHHHHHHHHHHHHH
T ss_pred cccccccccchHHHHHHHHHHHH
Confidence 457777777765
No 222
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.04 E-value=2.4 Score=29.01 Aligned_cols=69 Identities=13% Similarity=0.046 Sum_probs=52.5
Q ss_pred CCCHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCC
Q 021583 85 EFPLITVKKALKTLENEKD---WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHL 154 (310)
Q Consensus 85 ~p~~~~~~~li~~~~~~~~---~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~ 154 (310)
+.+...+..+-.++...++ .++|..++++..+.. +-+..+...+-..+.+.|++++|...|+++.+..-
T Consensus 3 p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~d-p~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p 74 (93)
T 3bee_A 3 AVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLE-PYNEAALSLIANDHFISFRFQEAIDTWVLLLDSND 74 (93)
T ss_dssp CCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHC-cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Confidence 3456666666666654444 689999999988652 34567777788889999999999999999998754
No 223
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=90.78 E-value=8.1 Score=33.94 Aligned_cols=74 Identities=12% Similarity=0.130 Sum_probs=61.2
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHH
Q 021583 120 GRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVS 198 (310)
Q Consensus 120 ~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~ 198 (310)
..+..+|..+-..+...|++++|...+++..+.+ ++...|..+=..+.-.|++++|.+.|++-.. ..|...||.
T Consensus 274 ~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln---~s~~a~~llG~~~~~~G~~~eA~e~~~~Alr--L~P~~~t~~ 347 (372)
T 3ly7_A 274 NNLSIIYQIKAVSALVKGKTDESYQAINTGIDLE---MSWLNYVLLGKVYEMKGMNREAADAYLTAFN--LRPGANTLY 347 (372)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HSCSHHHHH
T ss_pred CcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHh--cCCCcChHH
Confidence 5678899988888888899999999999999986 3455777777888899999999999988766 357777754
No 224
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=90.56 E-value=7.6 Score=36.22 Aligned_cols=138 Identities=12% Similarity=0.035 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcC-CHHHHHHH
Q 021583 69 KEEVYGALDSFIAWELEFPLITVKKALKTLENEK--DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDG-RLDEAEEL 145 (310)
Q Consensus 69 ~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~--~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g-~~~~A~~~ 145 (310)
.+++...++.+.+.+ +-+..+|+.--..+.+.+ +++++.+.++.+.+.. .-|-.+|+.--..+.+.| ..+++.+.
T Consensus 89 ~~~eL~~~~~~l~~~-pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d-~~N~~aW~~R~~~l~~l~~~~~~el~~ 166 (567)
T 1dce_A 89 VKAELGFLESCLRVN-PKSYGTWHHRCWLLSRLPEPNWARELELCARFLEAD-ERNFHCWDYRRFVAAQAAVAPAEELAF 166 (567)
T ss_dssp HHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhc-cccccHHHHHHHHHHHcCCChHHHHHH
Confidence 455667777777655 456788999888888999 7799999999999774 457888888888888888 89999999
Q ss_pred HHHHHhcCCCCChHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhcCCH
Q 021583 146 WTKIFLDHLEGTPRIFFDKMISIYYNR--------------GMHEKMFEIFADMEELGVRP-NVSIVSMMGNAFQKLGML 210 (310)
Q Consensus 146 ~~~m~~~~~~~~~~~~y~~li~~~~~~--------------g~~~~a~~l~~~m~~~g~~p-~~~ty~~li~~~~~~g~~ 210 (310)
++++.+... .+...|+..-..+.+. +.++++.+.+...... .| |...|..+--.+.+.++.
T Consensus 167 ~~~~I~~~p--~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~--~P~~~saW~y~~~ll~~~~~~ 242 (567)
T 1dce_A 167 TDSLITRNF--SNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFT--DPNDQSAWFYHRWLLGRAEPH 242 (567)
T ss_dssp HHTTTTTTC--CCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHH--CSSCSHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHCC--CCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhh--CCCCccHHHHHHHHHhcCCCc
Confidence 999998765 5667888887777763 4568888888877653 45 567788777777776664
Q ss_pred HH
Q 021583 211 DK 212 (310)
Q Consensus 211 ~~ 212 (310)
++
T Consensus 243 ~~ 244 (567)
T 1dce_A 243 DV 244 (567)
T ss_dssp SC
T ss_pred cc
Confidence 33
No 225
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=90.27 E-value=3.3 Score=31.43 Aligned_cols=79 Identities=16% Similarity=0.041 Sum_probs=59.4
Q ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHhcCCHHHHHHHHH
Q 021583 73 YGALDSFIAWELEFPLITVKKALKTLENEK---DWKRIIQVTKWMLSKGQGR--TMGTYFLLLNALAEDGRLDEAEELWT 147 (310)
Q Consensus 73 ~~~~~~m~~~~~~p~~~~~~~li~~~~~~~---~~~~a~~~~~~m~~~g~~p--~~~ty~~ll~~~~~~g~~~~A~~~~~ 147 (310)
.+-+.+..+.| .++..+.-.+-.++++.+ +.+++..+++...+.. .| ....+=.|--+|.+.|++++|.+.++
T Consensus 18 ~~~y~~e~~~~-~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~-~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~ 95 (152)
T 1pc2_A 18 EKKFQSEKAAG-SVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG-SKEEQRDYVFYLAVGNYRLKEYEKALKYVR 95 (152)
T ss_dssp HHHHHHHHHTT-CCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHccC-CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-CccchHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 44444555555 378888888888999988 6669999999988764 34 23444445667799999999999999
Q ss_pred HHHhcC
Q 021583 148 KIFLDH 153 (310)
Q Consensus 148 ~m~~~~ 153 (310)
.+.+..
T Consensus 96 ~lL~ie 101 (152)
T 1pc2_A 96 GLLQTE 101 (152)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 999874
No 226
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=90.26 E-value=5.4 Score=31.06 Aligned_cols=132 Identities=10% Similarity=0.015 Sum_probs=92.1
Q ss_pred hHHHHHHhcCCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhc
Q 021583 57 KLVTCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAED 136 (310)
Q Consensus 57 ~~~~~l~~~~~~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~ 136 (310)
+|.-+|..-+ .+.|+++.+++ -+...|..|-....+.|+++-|.+.|+...+ |..|.-.|.-.
T Consensus 11 rF~LAL~lg~--l~~A~e~a~~l------~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D---------~~~L~~Ly~~t 73 (177)
T 3mkq_B 11 RFDLALEYGN--LDAALDEAKKL------NDSITWERLIQEALAQGNASLAEMIYQTQHS---------FDKLSFLYLVT 73 (177)
T ss_dssp HHHHHHHTTC--HHHHHHHHHHH------CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTC---------HHHHHHHHHHH
T ss_pred HHHHHHhcCC--HHHHHHHHHHh------CCHHHHHHHHHHHHHcCChHHHHHHHHHhCC---------HHHHHHHHHHh
Confidence 3444443333 55556665554 3478999999999999999999999988654 36777778888
Q ss_pred CCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHH
Q 021583 137 GRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216 (310)
Q Consensus 137 g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l 216 (310)
|+.++-.++-+.-...|- ||.-...+.-.|+++++.++|.+ .|..|.... .....|.-+.|.++
T Consensus 74 g~~e~L~kla~iA~~~g~-------~n~af~~~l~lGdv~~~i~lL~~---~~r~~eA~~------~A~t~g~~~~a~~~ 137 (177)
T 3mkq_B 74 GDVNKLSKMQNIAQTRED-------FGSMLLNTFYNNSTKERSSIFAE---GGSLPLAYA------VAKANGDEAAASAF 137 (177)
T ss_dssp TCHHHHHHHHHHHHHTTC-------HHHHHHHHHHHTCHHHHHHHHHH---TTCHHHHHH------HHHHTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCcc-------HHHHHHHHHHcCCHHHHHHHHHH---CCChHHHHH------HHHHcCcHHHHHHH
Confidence 998887777666666554 66666777889999999999854 333332211 12236778888888
Q ss_pred HHhCC
Q 021583 217 KKKYP 221 (310)
Q Consensus 217 ~~~~~ 221 (310)
.+.+.
T Consensus 138 ~~~~~ 142 (177)
T 3mkq_B 138 LEQAE 142 (177)
T ss_dssp HHHTT
T ss_pred HHHhC
Confidence 87653
No 227
>1v54_E Cytochrome C oxidase polypeptide VA; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: a.118.11.1 PDB: 1oco_E* 1occ_E* 1ocz_E* 1ocr_E* 1v55_E* 2dyr_E* 2dys_E* 2eij_E* 2eik_E* 2eil_E* 2eim_E* 2ein_E* 2occ_E* 2ybb_P* 2zxw_E* 3abk_E* 3abl_E* 3abm_E* 3ag1_E* 3ag2_E* ...
Probab=90.09 E-value=2 Score=30.08 Aligned_cols=43 Identities=9% Similarity=0.240 Sum_probs=32.4
Q ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 021583 73 YGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWML 115 (310)
Q Consensus 73 ~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~ 115 (310)
.+.+..+....+.|++....+.+.+|.+.+++..|.++|+-.+
T Consensus 30 rrglN~l~~~DlVP~P~ii~aaLrAcRRvND~alAVR~lE~iK 72 (109)
T 1v54_E 30 RKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVK 72 (109)
T ss_dssp HHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 5556666677777777777777788777777777777777776
No 228
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=89.02 E-value=3.1 Score=29.09 Aligned_cols=83 Identities=16% Similarity=0.080 Sum_probs=61.6
Q ss_pred cCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccchheeccCcccCChhhhhHhhhccCC
Q 021583 172 RGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSATEG 251 (310)
Q Consensus 172 ~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~g 251 (310)
...+++|..+-+-+...+. ....--+-+..+...|++++|..+.+..- -||...|-+|-+.+.|
T Consensus 20 ~H~HqEA~tIAdwL~~~~~--~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c--------------~pdlepw~ALce~rlG 83 (116)
T 2p58_C 20 NHYHEEANCIAEWLHLKGE--EEAVQLIRLSSLMNRGDYASALQQGNKLA--------------YPDLEPWLALCEYRLG 83 (116)
T ss_dssp TTCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHTTCHHHHHHHHTTSC--------------CGGGHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHhCCc--HHHHHHHHHHHHHcchhHHHHHHhcCCCC--------------CchHHHHHHHHHHhcc
Confidence 3457888888888777654 22222333455889999999998865422 5788899888888999
Q ss_pred ChhhHHhhhchhhcCCCCC
Q 021583 252 KTNEVETTKNPNESSEEPE 270 (310)
Q Consensus 252 ~~~~a~~~~~~m~~~~~~p 270 (310)
..+.++..+.++..+|-+.
T Consensus 84 l~s~le~rL~~la~sg~p~ 102 (116)
T 2p58_C 84 LGSALESRLNRLARSQDPR 102 (116)
T ss_dssp CHHHHHHHHHHHTTCCCHH
T ss_pred cHHHHHHHHHHHHhCCCHH
Confidence 9999999998888877553
No 229
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=88.59 E-value=12 Score=32.64 Aligned_cols=137 Identities=12% Similarity=0.008 Sum_probs=102.3
Q ss_pred cHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhc-C-CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHH-----
Q 021583 68 VKEEVYGALDSFIAWELEFPLITVKKALKTLENE-K-DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLD----- 140 (310)
Q Consensus 68 ~~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~-~-~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~----- 140 (310)
..+++...++.+...+ +-+..+|+.--..+.+. + ++++++++++.+.+.. .-|-.+|+----.+.+.|..+
T Consensus 104 ~l~eEL~~~~~~L~~n-PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~d-pkNy~AW~~R~wvl~~l~~~~~~~~~ 181 (349)
T 3q7a_A 104 SLEDELRLMNEFAVQN-LKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPD-PKNYHTWAYLHWLYSHFSTLGRISEA 181 (349)
T ss_dssp CHHHHHHHHHHHHHTT-CCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSC-TTCHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred hHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhccccccchh
Confidence 4667778888887766 45678888888888777 7 8899999999988663 456677766555555555555
Q ss_pred ---HHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhcCC
Q 021583 141 ---EAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGM-------HEKMFEIFADMEELGVRP-NVSIVSMMGNAFQKLGM 209 (310)
Q Consensus 141 ---~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~-------~~~a~~l~~~m~~~g~~p-~~~ty~~li~~~~~~g~ 209 (310)
+++++++++.+... .+...|+-.-..+.+.++ ++++++.+....... | |...|+.+-..+.+.|.
T Consensus 182 ~~~eELe~~~k~I~~dp--~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~~--P~n~SaW~Ylr~Ll~~~~~ 257 (349)
T 3q7a_A 182 QWGSELDWCNEMLRVDG--RNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLI--PHNVSAWNYLRGFLKHFSL 257 (349)
T ss_dssp HHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHhcCC
Confidence 99999999999875 566788888888887776 688888888877643 4 67778776666666655
Q ss_pred H
Q 021583 210 L 210 (310)
Q Consensus 210 ~ 210 (310)
-
T Consensus 258 ~ 258 (349)
T 3q7a_A 258 P 258 (349)
T ss_dssp C
T ss_pred C
Confidence 3
No 230
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=88.49 E-value=7.8 Score=37.51 Aligned_cols=128 Identities=10% Similarity=0.001 Sum_probs=80.2
Q ss_pred HHHHHHHHhcCC-HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCC-HHHHHHHHHHHHhc------CCCCChH--H-
Q 021583 92 KKALKTLENEKD-WKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGR-LDEAEELWTKIFLD------HLEGTPR--I- 160 (310)
Q Consensus 92 ~~li~~~~~~~~-~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~-~~~A~~~~~~m~~~------~~~~~~~--~- 160 (310)
..++..+...++ .+.|..+|+.+.+..-..+......+|..+.+.++ --+|.+++.+..+. ...+.+. .
T Consensus 252 ~~Ll~~~~~t~~~~~~a~~~le~L~~~~p~~~~~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~ 331 (754)
T 4gns_B 252 YSLKSFIAITPSLVDFTIDYLKGLTKKDPIHDIYYKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSAR 331 (754)
T ss_dssp HHHHHHHHTCGGGHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHH
T ss_pred HHHHHHHcccccHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhccccccccc
Confidence 444555555666 68899999998876322223333344444444432 23455555544321 1111111 1
Q ss_pred HH---HHHH----HHHHHcCCHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHhCC
Q 021583 161 FF---DKMI----SIYYNRGMHEKMFEIFADMEELGVRPN-VSIVSMMGNAFQKLGMLDKYEKLKKKYP 221 (310)
Q Consensus 161 ~y---~~li----~~~~~~g~~~~a~~l~~~m~~~g~~p~-~~ty~~li~~~~~~g~~~~a~~l~~~~~ 221 (310)
.. ..|+ ..+...|+++-|+++-..-.. +.|+ -.||-.|..+|...|+++.|+-.++.|.
T Consensus 332 ~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~--~aPseF~tW~~La~vYi~l~d~e~ALLtLNScP 398 (754)
T 4gns_B 332 LMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTE--LALDSFESWYNLARCHIKKEEYEKALFAINSMP 398 (754)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHSC
T ss_pred ccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHh--cCchhhHHHHHHHHHHHHhccHHHHHHHHhcCC
Confidence 11 1133 345568999999999988655 5686 5999999999999999999999998764
No 231
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=88.12 E-value=5.7 Score=29.04 Aligned_cols=83 Identities=12% Similarity=0.032 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHH---HHHHHHHHHhcCCCCChH-HHHHHHHHHHHHcCCHHHH
Q 021583 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDE---AEELWTKIFLDHLEGTPR-IFFDKMISIYYNRGMHEKM 178 (310)
Q Consensus 103 ~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~---A~~~~~~m~~~~~~~~~~-~~y~~li~~~~~~g~~~~a 178 (310)
....+.+-|+.....|. ++..+--.+-.++++.....+ +..+++++.+.+- |... ...=.|--|+.+.|++++|
T Consensus 16 ~l~~~~~~y~~e~~~~~-~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~-p~~~Rd~lY~LAvg~yklg~Y~~A 93 (126)
T 1nzn_A 16 DLLKFEKKFQSEKAAGS-VSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGS-KEEQRDYVFYLAVGNYRLKEYEKA 93 (126)
T ss_dssp HHHHHHHHHHHHHHHSC-CCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSC-HHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHhccCC-CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCC-cchHHHHHHHHHHHHHHhhhHHHH
Confidence 34445555555444343 666666666667777666544 7777777666542 1112 2333444566777777777
Q ss_pred HHHHHHHHH
Q 021583 179 FEIFADMEE 187 (310)
Q Consensus 179 ~~l~~~m~~ 187 (310)
.+.++.+.+
T Consensus 94 ~~~~~~lL~ 102 (126)
T 1nzn_A 94 LKYVRGLLQ 102 (126)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777766
No 232
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=87.37 E-value=3 Score=29.09 Aligned_cols=83 Identities=14% Similarity=0.115 Sum_probs=61.3
Q ss_pred cCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccchheeccCcccCChhhhhHhhhccCC
Q 021583 172 RGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPAKPKYELDSATEG 251 (310)
Q Consensus 172 ~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~g 251 (310)
...+++|..+-+-+...+. ....--+-+..+...|++++|.++.+.. .-||...|-+|-+.+.|
T Consensus 19 ~H~HqEA~tIAdwL~~~~~--~E~v~lIR~sSLmNrG~Yq~Al~l~~~~--------------c~pdlepw~ALce~rlG 82 (115)
T 2uwj_G 19 QHCHEEALCIAEWLERLGQ--DEAARLIRISSLANQGRYQEALAFAHGN--------------PWPALEPWFALCEWHLG 82 (115)
T ss_dssp TTCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHTTCHHHHHGGGTTC--------------CCGGGHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHHhCCc--HHHHHHHHHHHHHcchhHHHHHHhcCCC--------------CCchHHHHHHHHHHhcc
Confidence 3457888888888777654 2222233345588999999998775431 26888999999888999
Q ss_pred ChhhHHhhhchhhcCCCCC
Q 021583 252 KTNEVETTKNPNESSEEPE 270 (310)
Q Consensus 252 ~~~~a~~~~~~m~~~~~~p 270 (310)
..+.++..+.++..+|-+.
T Consensus 83 l~s~le~rL~~la~sg~p~ 101 (115)
T 2uwj_G 83 LGAALDRRLAGLGGSSDPA 101 (115)
T ss_dssp CHHHHHHHHHHHHTCSSHH
T ss_pred cHHHHHHHHHHHHhCCCHH
Confidence 9999999998988887553
No 233
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=87.14 E-value=6 Score=34.92 Aligned_cols=67 Identities=7% Similarity=-0.047 Sum_probs=55.1
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh-----cCCCCC
Q 021583 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFL-----DHLEGT 157 (310)
Q Consensus 90 ~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~-----~~~~~~ 157 (310)
+...++..+...|+++++...+...... ...+...|..||.+|.+.|+..+|++.|+++.+ .|++|.
T Consensus 173 a~~~~~~~~l~~g~~~~a~~~l~~~~~~-~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~ 244 (388)
T 2ff4_A 173 AHTAKAEAEIACGRASAVIAELEALTFE-HPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPG 244 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 4556677788899999999988887654 356788999999999999999999999998765 377543
No 234
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=85.43 E-value=10 Score=32.21 Aligned_cols=93 Identities=6% Similarity=0.001 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHCCCCCC---HHHHHHHHHHHHh-----cCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHc-CC
Q 021583 104 WKRIIQVTKWMLSKGQGRT---MGTYFLLLNALAE-----DGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNR-GM 174 (310)
Q Consensus 104 ~~~a~~~~~~m~~~g~~p~---~~ty~~ll~~~~~-----~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~-g~ 174 (310)
...|...+++..+. -|+ -..|..|...|.+ -|+.++|.+.|++-.+.+-. -+..++...-..+|+. |+
T Consensus 179 l~~A~a~lerAleL--DP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~-~~id~~v~YA~~l~~~~gd 255 (301)
T 3u64_A 179 VHAAVMMLERACDL--WPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSA-HDPDHHITYADALCIPLNN 255 (301)
T ss_dssp HHHHHHHHHHHHHH--CTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCT-TCSHHHHHHHHHTTTTTTC
T ss_pred HHHHHHHHHHHHHh--CCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCC-CCchHHHHHHHHHHHhcCC
Confidence 34566666665544 465 6789999999999 49999999999999987531 1235788888889885 99
Q ss_pred HHHHHHHHHHHHHCCCC--CCHHHHHH
Q 021583 175 HEKMFEIFADMEELGVR--PNVSIVSM 199 (310)
Q Consensus 175 ~~~a~~l~~~m~~~g~~--p~~~ty~~ 199 (310)
.+++.+.+++-.+.... |+....+.
T Consensus 256 ~~~a~~~L~kAL~a~p~~~P~~~lan~ 282 (301)
T 3u64_A 256 RAGFDEALDRALAIDPESVPHNKLLVI 282 (301)
T ss_dssp HHHHHHHHHHHHHCCGGGCSSCHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCChhHHHH
Confidence 99999999999987666 77554444
No 235
>2y69_E Cytochrome C oxidase subunit 5A; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=84.44 E-value=6.8 Score=29.05 Aligned_cols=44 Identities=9% Similarity=0.249 Sum_probs=31.5
Q ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 021583 72 VYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWML 115 (310)
Q Consensus 72 ~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~ 115 (310)
+.+-+..+...++.|++....+.+.+|.+.+++..|.++|+-.+
T Consensus 72 lrrglN~l~~~DlVPeP~Ii~AALrAcRRvNDfalAVR~lE~vK 115 (152)
T 2y69_E 72 LRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVK 115 (152)
T ss_dssp HHHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 34556666667777777777777777777777777777777766
No 236
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=84.38 E-value=8.3 Score=28.84 Aligned_cols=85 Identities=12% Similarity=0.125 Sum_probs=56.4
Q ss_pred hcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHH
Q 021583 100 NEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMF 179 (310)
Q Consensus 100 ~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~ 179 (310)
.+|++.+...-+-.+ ..+...++.-++.+...|.-|+-.++..++..... ++....-.+-++|.+.|+..+|.
T Consensus 73 ~C~NlKrVi~C~~~~-----n~~se~vd~ALd~lv~~~KkDqLdki~~~~l~n~~--~~~~~l~kia~Ay~Klg~~r~a~ 145 (172)
T 1wy6_A 73 KCQNLKSVVECGVIN-----NTLNEHVNKALDILVIQGKRDKLEEIGREILKNNE--VSASILVAIANALRRVGDERDAT 145 (172)
T ss_dssp GCSCTHHHHHHHHHT-----TCCCHHHHHHHHHHHHTTCHHHHHHHHHHHC--CC--SCHHHHHHHHHHHHHTTCHHHHH
T ss_pred hhhcHHHHHHHHHHh-----cchHHHHHHHHHHHHHhccHhHHHHHHHHHhccCC--CChHHHHHHHHHHHHhcchhhHH
Confidence 344555444444332 12445667778888888888888888888544322 33445667778888888888888
Q ss_pred HHHHHHHHCCCC
Q 021583 180 EIFADMEELGVR 191 (310)
Q Consensus 180 ~l~~~m~~~g~~ 191 (310)
+++.+..+.|++
T Consensus 146 eLl~~AC~kG~k 157 (172)
T 1wy6_A 146 TLLIEACKKGEK 157 (172)
T ss_dssp HHHHHHHHTTCH
T ss_pred HHHHHHHHhhhH
Confidence 888888888875
No 237
>1v54_E Cytochrome C oxidase polypeptide VA; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: a.118.11.1 PDB: 1oco_E* 1occ_E* 1ocz_E* 1ocr_E* 1v55_E* 2dyr_E* 2dys_E* 2eij_E* 2eik_E* 2eil_E* 2eim_E* 2ein_E* 2occ_E* 2ybb_P* 2zxw_E* 3abk_E* 3abl_E* 3abm_E* 3ag1_E* 3ag2_E* ...
Probab=84.35 E-value=8.5 Score=26.97 Aligned_cols=64 Identities=8% Similarity=-0.104 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHH
Q 021583 103 DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISI 168 (310)
Q Consensus 103 ~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~ 168 (310)
+.-+..+-++.+....+.|+.....+.|++|-+-+++..|.++|+-.+.+-- ....+|..++.-
T Consensus 25 D~~e~rrglN~l~~~DlVP~P~ii~aaLrAcRRvND~alAVR~lE~iK~K~~--~~~~iY~~~lqE 88 (109)
T 1v54_E 25 DAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAG--PHKEIYPYVIQE 88 (109)
T ss_dssp CHHHHHHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT--TCTTHHHHHHHH
T ss_pred cHHHHHHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhc--CchhhHHHHHHH
Confidence 4566777788888888899999999999999999999999999998887643 223357776654
No 238
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=83.28 E-value=13 Score=28.19 Aligned_cols=113 Identities=11% Similarity=0.038 Sum_probs=73.7
Q ss_pred CHHHHHHHHHHHHhcCCH------HHHHHHHHHHHHCCCCCCH----HHHHHHHH---HHHhcCCHHHHHHHHHHHHhcC
Q 021583 87 PLITVKKALKTLENEKDW------KRIIQVTKWMLSKGQGRTM----GTYFLLLN---ALAEDGRLDEAEELWTKIFLDH 153 (310)
Q Consensus 87 ~~~~~~~li~~~~~~~~~------~~a~~~~~~m~~~g~~p~~----~ty~~ll~---~~~~~g~~~~A~~~~~~m~~~~ 153 (310)
|..+|-..+...-+.|++ ++.+++|+..... ++|+. ..|.-|.- .+...+++++|.++|+.+++.
T Consensus 12 ~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~-~Pp~k~~~wrrYI~LWIrYA~~~ei~D~d~aR~vy~~a~~~- 89 (161)
T 4h7y_A 12 NPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEA-LPPDKYGQNESFARIQVRFAELKAIQEPDDARDYFQMARAN- 89 (161)
T ss_dssp SHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHH-SCGGGGTTCHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHc-CCccccccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH-
Confidence 466666667776666777 7777888866543 44531 22222111 112337899999999999876
Q ss_pred CCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q 021583 154 LEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNA 203 (310)
Q Consensus 154 ~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~ 203 (310)
.+.. .-.|-..-..=.+.|+.++|.+++..-...+.+|.. ...+.|..
T Consensus 90 hKkF-AKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~-~le~a~~n 137 (161)
T 4h7y_A 90 CKKF-AFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLE-MLEIALRN 137 (161)
T ss_dssp CTTB-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHH-HHHHHHHH
T ss_pred hHHH-HHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHH-HHHHHHHh
Confidence 3334 457877778888999999999999998887766533 33444433
No 239
>2nsz_A Programmed cell death protein 4; PDCD4, tumor suppressor, translation, antitumor protein; 1.15A {Mus musculus} SCOP: a.118.1.14 PDB: 2kzt_B 2hm8_A 2ggf_A
Probab=81.86 E-value=6.8 Score=28.68 Aligned_cols=63 Identities=13% Similarity=0.062 Sum_probs=30.2
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCC--HHHHHHHHHHHHhcCC
Q 021583 91 VKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGR--LDEAEELWTKIFLDHL 154 (310)
Q Consensus 91 ~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~--~~~A~~~~~~m~~~~~ 154 (310)
.+.++.-|...|+.++|.+-++++... ......++..+..++-+.++ .+.+.+++..+...|+
T Consensus 10 i~~ll~EY~~~~D~~Ea~~cl~eL~~p-~f~~e~V~~~i~~alE~~~~~~~e~~~~LL~~L~~~~~ 74 (129)
T 2nsz_A 10 IDMLLKEYLLSGDISEAEHCLKELEVP-HFHHELVYEAIVMVLESTGESAFKMILDLLKSLWKSST 74 (129)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHTCG-GGHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHhCCC-ccHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCC
Confidence 345555555556666665555554422 11223444444444444432 2345555555555554
No 240
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=80.62 E-value=18 Score=30.67 Aligned_cols=82 Identities=6% Similarity=-0.118 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHcCCCCC---HHHHHHHHHHHHhc-----CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhc-CCHHH
Q 021583 71 EVYGALDSFIAWELEFP---LITVKKALKTLENE-----KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAED-GRLDE 141 (310)
Q Consensus 71 ~~~~~~~~m~~~~~~p~---~~~~~~li~~~~~~-----~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~-g~~~~ 141 (310)
.+..++++..+.. |+ -..|..+-..|.+. |+.++|.+.|++-.+.+-.-+..++...-..++.. |+.++
T Consensus 181 ~A~a~lerAleLD--P~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~ 258 (301)
T 3u64_A 181 AAVMMLERACDLW--PSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAG 258 (301)
T ss_dssp HHHHHHHHHHHHC--TTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHH
T ss_pred HHHHHHHHHHHhC--CCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHH
Confidence 3455555555443 54 56788888889884 99999999999988764222478888889999985 99999
Q ss_pred HHHHHHHHHhcCC
Q 021583 142 AEELWTKIFLDHL 154 (310)
Q Consensus 142 A~~~~~~m~~~~~ 154 (310)
|.+.+++......
T Consensus 259 a~~~L~kAL~a~p 271 (301)
T 3u64_A 259 FDEALDRALAIDP 271 (301)
T ss_dssp HHHHHHHHHHCCG
T ss_pred HHHHHHHHHcCCC
Confidence 9999999998765
No 241
>2ion_A PDCD4, programmed cell death 4, PDCD4; alpha-helical, antitumor protein; 1.57A {Mus musculus} SCOP: a.118.1.14 PDB: 2ios_A 2iol_A
Probab=77.36 E-value=6.1 Score=29.87 Aligned_cols=64 Identities=13% Similarity=0.060 Sum_probs=33.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCC--HHHHHHHHHHHHhcCC
Q 021583 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGR--LDEAEELWTKIFLDHL 154 (310)
Q Consensus 90 ~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~--~~~A~~~~~~m~~~~~ 154 (310)
..+.+|.-|...|+.++|.+-++++... ......++..+..++-+.++ .+.+.+++..+...++
T Consensus 11 ki~~lL~EY~~~~D~~EA~~cl~EL~~p-~f~~e~V~~~i~~alE~~~~~~re~~~~LL~~L~~~~~ 76 (152)
T 2ion_A 11 EIDMLLKEYLLSGDISEAEHCLKELEVP-HFHHELVYEAIVMVLESTGESAFKMILDLLKSLWKSST 76 (152)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHTCG-GGHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhCCC-cchHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCC
Confidence 3455666666666666666666665422 12233444455555554322 3345556666665555
No 242
>2y69_E Cytochrome C oxidase subunit 5A; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=76.31 E-value=19 Score=26.67 Aligned_cols=78 Identities=9% Similarity=-0.092 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHhc-C-CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHH
Q 021583 89 ITVKKALKTLENE-K-DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMI 166 (310)
Q Consensus 89 ~~~~~li~~~~~~-~-~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li 166 (310)
.-|..--..|... . +.-+..+-++.+....+.|+.......|++|-+-+|+..|.++|+-.+.+-- ....+|..++
T Consensus 52 EeFdaRy~~~F~~~~iD~wElrrglN~l~~~DlVPeP~Ii~AALrAcRRvNDfalAVR~lE~vK~K~~--~~~~iY~y~l 129 (152)
T 2y69_E 52 EEFDARWVTYFNKPDIDAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAG--PHKEIYPYVI 129 (152)
T ss_dssp HHHHHHHHHHHTCTTCCHHHHHHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT--TCTTHHHHHH
T ss_pred HHHHHHHHHHcCCcCccHHHHHHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcC--CchhhHHHHH
Confidence 3344434444433 3 4556777777777888999999999999999999999999999998887643 2234577766
Q ss_pred HH
Q 021583 167 SI 168 (310)
Q Consensus 167 ~~ 168 (310)
.-
T Consensus 130 qE 131 (152)
T 2y69_E 130 QE 131 (152)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 243
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=73.91 E-value=48 Score=29.45 Aligned_cols=98 Identities=8% Similarity=-0.108 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHCC--CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHH------
Q 021583 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKG--QGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRI------ 160 (310)
Q Consensus 89 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~g--~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~------ 160 (310)
.+...+...|.+.|+++.|.+.|..+.... ...-...+-.+|..+...+++..|.....+....-....+..
T Consensus 132 ~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk 211 (429)
T 4b4t_R 132 QAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYK 211 (429)
T ss_dssp SCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHH
Confidence 366788899999999999999999998553 334467777889999999999999999988764422111111
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 021583 161 FFDKMISIYYNRGMHEKMFEIFADMEEL 188 (310)
Q Consensus 161 ~y~~li~~~~~~g~~~~a~~l~~~m~~~ 188 (310)
.|..++ +...+++..|-+.|-+....
T Consensus 212 ~~~gl~--~l~~r~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 212 TYYGIH--CLAVRNFKEAAKLLVDSLAT 237 (429)
T ss_dssp HHHHHG--GGGTSCHHHHHHHHHHHHHH
T ss_pred HHHHHH--HHHhChHHHHHHHHHHHhcc
Confidence 233333 23578899998888776543
No 244
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=72.53 E-value=28 Score=26.06 Aligned_cols=79 Identities=18% Similarity=0.132 Sum_probs=62.3
Q ss_pred HhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHH
Q 021583 134 AEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKY 213 (310)
Q Consensus 134 ~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a 213 (310)
..+|++......+-.+-. +....+.-+..+...|+-|...+++.++.. +.+|++...-.+.++|.+.|+..+|
T Consensus 72 s~C~NlKrVi~C~~~~n~------~se~vd~ALd~lv~~~KkDqLdki~~~~l~-n~~~~~~~l~kia~Ay~Klg~~r~a 144 (172)
T 1wy6_A 72 DKCQNLKSVVECGVINNT------LNEHVNKALDILVIQGKRDKLEEIGREILK-NNEVSASILVAIANALRRVGDERDA 144 (172)
T ss_dssp GGCSCTHHHHHHHHHTTC------CCHHHHHHHHHHHHTTCHHHHHHHHHHHC---CCSCHHHHHHHHHHHHHTTCHHHH
T ss_pred HhhhcHHHHHHHHHHhcc------hHHHHHHHHHHHHHhccHhHHHHHHHHHhc-cCCCChHHHHHHHHHHHHhcchhhH
Confidence 355666777776655432 234688889999999999999999999654 4578888889999999999999999
Q ss_pred HHHHHh
Q 021583 214 EKLKKK 219 (310)
Q Consensus 214 ~~l~~~ 219 (310)
..++++
T Consensus 145 ~eLl~~ 150 (172)
T 1wy6_A 145 TTLLIE 150 (172)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999965
No 245
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=71.13 E-value=58 Score=29.15 Aligned_cols=137 Identities=10% Similarity=0.132 Sum_probs=89.2
Q ss_pred CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH-HCCCCC--------------------CH------------------
Q 021583 83 ELEFPLITVKKALKTLENEKDWKRIIQVTKWML-SKGQGR--------------------TM------------------ 123 (310)
Q Consensus 83 ~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~-~~g~~p--------------------~~------------------ 123 (310)
+...+......++..|.+.++++...+.+..+. .+|..+ +.
T Consensus 51 d~~s~~r~l~~iv~l~~~~~~~~~l~e~i~~Lskkr~qlk~ai~~~V~~~~~~l~~~~~~d~~~~~~~i~~l~~vte~ki 130 (445)
T 4b4t_P 51 DLASSKEVLAKIVDLLASRNKWDDLNEQLTLLSKKHGQLKLSIQYMIQKVMEYLKSSKSLDLNTRISVIETIRVVTENKI 130 (445)
T ss_dssp STTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTTTTSHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHCCSSSSSCCC
T ss_pred chhhHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhccch
Confidence 445567778888888888888888766665544 222211 11
Q ss_pred -------HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChH----HHHHHHHHHHHHcCCHHHHHHHHHHHHH----C
Q 021583 124 -------GTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR----IFFDKMISIYYNRGMHEKMFEIFADMEE----L 188 (310)
Q Consensus 124 -------~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~----~~y~~li~~~~~~g~~~~a~~l~~~m~~----~ 188 (310)
.....|.+.|...|++.+|.+++.++...-....+. ..|..-+.-|...+++.+|..+++.... .
T Consensus 131 flE~erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~ 210 (445)
T 4b4t_P 131 FVEVERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKN 210 (445)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhccc
Confidence 112345667778888888888888876432211221 2677788888888899888888887642 2
Q ss_pred CCCCCH--HHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 189 GVRPNV--SIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 189 g~~p~~--~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
...|+. ..|..++..+...+++.+|.+.|.+
T Consensus 211 ~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e 243 (445)
T 4b4t_P 211 PKYESLKLEYYNLLVKISLHKREYLEVAQYLQE 243 (445)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 233332 5567777777788888888777653
No 246
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=71.02 E-value=20 Score=27.53 Aligned_cols=128 Identities=8% Similarity=0.034 Sum_probs=64.8
Q ss_pred HcCCCCCHHH--HHHHHHHHHhcCCHHHHHHHHHHHHHC-CCCCCH-------HHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 021583 81 AWELEFPLIT--VKKALKTLENEKDWKRIIQVTKWMLSK-GQGRTM-------GTYFLLLNALAEDGRLDEAEELWTKIF 150 (310)
Q Consensus 81 ~~~~~p~~~~--~~~li~~~~~~~~~~~a~~~~~~m~~~-g~~p~~-------~ty~~ll~~~~~~g~~~~A~~~~~~m~ 150 (310)
..|+.|.-.. +-.-+..+...|.++.|.-+.+.+... +..|+. .++..+-+++...|++..|...|++..
T Consensus 11 ~~~~~~~~~~~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qAL 90 (167)
T 3ffl_A 11 SSGLVPRGSHMNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMAL 90 (167)
T ss_dssp ----------CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ccCCCCCccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 3455554333 334477777888888888887775522 234442 355666778888888888888887754
Q ss_pred hc-CCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCH-HHHHHHHHHHHhcCCHHHHHHHHHhCCC
Q 021583 151 LD-HLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNV-SIVSMMGNAFQKLGMLDKYEKLKKKYPP 222 (310)
Q Consensus 151 ~~-~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~-~ty~~li~~~~~~g~~~~a~~l~~~~~p 222 (310)
+. ...+.+..++..+ . ....... ......+. .=|. +-.||.+.++.++|..+++.+.+
T Consensus 91 q~~k~l~k~~s~~~~~-~---~~ss~p~---------s~~~~~e~Elkyk-ia~C~~~l~~~~~Ai~~Le~Ip~ 150 (167)
T 3ffl_A 91 QQKKALSKTSKVRPST-G---NSASTPQ---------SQCLPSEIEVKYK-LAECYTVLKQDKDAIAILDGIPS 150 (167)
T ss_dssp HHHHCC---------------------------------CCCCHHHHHHH-HHHHHHHTTCHHHHHHHHHTSCG
T ss_pred HHHHHHhcCCCccccc-c---ccCCCcc---------cccccchHHHHHH-HHHHHHHHCCHHHHHHHHhcCCc
Confidence 32 1111111111111 0 0000000 00111222 2344 77889999999999999988653
No 247
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=70.62 E-value=24 Score=24.60 Aligned_cols=79 Identities=14% Similarity=0.179 Sum_probs=56.5
Q ss_pred CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHH
Q 021583 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEI 181 (310)
Q Consensus 102 ~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l 181 (310)
.+.++|..+-+++...+. ...+--+-+..+...|++++|..+.+.+- .|+.+.|-+|-. .+.|..++++.-
T Consensus 20 H~HqEA~tIAdwL~~~~~--~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce--~rlGl~s~le~r 90 (115)
T 2uwj_G 20 HCHEEALCIAEWLERLGQ--DEAARLIRISSLANQGRYQEALAFAHGNP-----WPALEPWFALCE--WHLGLGAALDRR 90 (115)
T ss_dssp TCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHTTCHHHHHGGGTTCC-----CGGGHHHHHHHH--HHTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCc--HHHHHHHHHHHHHcchhHHHHHHhcCCCC-----CchHHHHHHHHH--HhcccHHHHHHH
Confidence 467888888888887754 22333333567778899999988766543 366677877654 478888988888
Q ss_pred HHHHHHCC
Q 021583 182 FADMEELG 189 (310)
Q Consensus 182 ~~~m~~~g 189 (310)
+.++..+|
T Consensus 91 L~~la~sg 98 (115)
T 2uwj_G 91 LAGLGGSS 98 (115)
T ss_dssp HHHHHTCS
T ss_pred HHHHHhCC
Confidence 88888766
No 248
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=70.41 E-value=88 Score=30.95 Aligned_cols=188 Identities=14% Similarity=-0.002 Sum_probs=102.4
Q ss_pred HHHHHHHHHhcCC---HHHHHHHHHHHHHCC----CCCCH--HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHH
Q 021583 91 VKKALKTLENEKD---WKRIIQVTKWMLSKG----QGRTM--GTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIF 161 (310)
Q Consensus 91 ~~~li~~~~~~~~---~~~a~~~~~~m~~~g----~~p~~--~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~ 161 (310)
-..++...|+.|. .+.|.+.|+.....+ +.||. .+|+. -.+.|.-++-..++++.+.... ..-
T Consensus 689 r~~~l~~ac~~g~~~c~~~a~~~f~~~~~~~~~~~i~~dlr~~vy~~----~~~~g~~~~~~~l~~~~~~~~~----~~e 760 (909)
T 4fke_A 689 EINAISTACSNGLPQCENLAKTLFDQWMSDPENNPIHPNLRSTIYCN----AIAQGGQDQWDFAWGQLQQAQL----VNE 760 (909)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHTCTTSCCSCTTTHHHHHHH----HHHHSCHHHHHHHHHHHHHCCS----HHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHhhCCCCCcCCHHHHHHHHHH----HHHhCCHHHHHHHHHHHHccCC----HHH
Confidence 3456777788776 456788888766432 55664 33333 3355777777777777776543 234
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHhc-CCHHHHHHHHHhCCCCccchheeccCcccCCh
Q 021583 162 FDKMISIYYNRGMHEKMFEIFADMEEL-GVRPNVSIVSMMGNAFQKL-GMLDKYEKLKKKYPPPKWEYRYIKGKRVRIPA 239 (310)
Q Consensus 162 y~~li~~~~~~g~~~~a~~l~~~m~~~-g~~p~~~ty~~li~~~~~~-g~~~~a~~l~~~~~p~~~~~~~~~~~~~~~~~ 239 (310)
-..++.+++...+.+...++++..... .+++... ..++.+.... --.+.|.+++++= +..+.+. .....
T Consensus 761 k~~ll~aL~~~~d~~~l~~~L~~~l~~~~ir~qd~--~~~~~~v~~n~~g~~~~~~f~~~n------~~~l~~~-~~~~~ 831 (909)
T 4fke_A 761 ADKLRSALACSNEVWLLNRYLGYTLNPDLIRKQDA--TSTINSIASNVIGQPLAWDFVQSN------WKKLFQD-YGGGS 831 (909)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHTTCTTTSCGGGH--HHHHHHHHHSTTHHHHHHHHHHHH------CTTTTTS-SSSCC
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHHhCCCCCchhhH--HHHHHHHhcChHHHHHHHHHHHHH------HHHHHHH-hCCCc
Confidence 567889998888988888888877643 3444221 2223333332 2345566665430 1111110 11112
Q ss_pred hhhhHhhhc------cCCChhhHHhhhchhhcCCCCCchhhhhhhhhhhhhhhHHHHHHhhh
Q 021583 240 KPKYELDSA------TEGKTNEVETTKNPNESSEEPEAAANLNESLEETEANTKELLEEADA 295 (310)
Q Consensus 240 ~~~~~li~~------~~g~~~~a~~~~~~m~~~~~~p~~~~~~~ll~~~~~~~~~l~~~a~~ 295 (310)
.....++.. .....++.++.+..-...+.....+++...++......+.+-+..+.
T Consensus 832 ~~~~~~i~~~~~~~~t~~~~~~~~~f~~~~~~~~~~~~~~~~~~~le~i~~n~~w~~~~~~~ 893 (909)
T 4fke_A 832 FSFSNLIQGVTRRFSSEFELQQLEQFKKNNMDVGFGSGTRALEQALEKTKANIKWVKENKEV 893 (909)
T ss_dssp CCHHHHHHHHHTTCCSHHHHHHHHHHHTTCSSSCCGGGTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCCHHHHHHHHHHHhhCCccccchHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 223344443 23344555666655555555445566666776666555555444443
No 249
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=70.01 E-value=25 Score=24.56 Aligned_cols=79 Identities=13% Similarity=0.158 Sum_probs=56.0
Q ss_pred CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHH
Q 021583 102 KDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEI 181 (310)
Q Consensus 102 ~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l 181 (310)
.+.++|..+-+++...+. ...+--+-+..+...|++++|..+.+.+- .|+.+.|-+|-. .+.|..++++.-
T Consensus 21 H~HqEA~tIAdwL~~~~~--~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce--~rlGl~s~le~r 91 (116)
T 2p58_C 21 HYHEEANCIAEWLHLKGE--EEAVQLIRLSSLMNRGDYASALQQGNKLA-----YPDLEPWLALCE--YRLGLGSALESR 91 (116)
T ss_dssp TCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHTTCHHHHHHHHTTSC-----CGGGHHHHHHHH--HHHTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCc--HHHHHHHHHHHHHcchhHHHHHHhcCCCC-----CchHHHHHHHHH--HhcccHHHHHHH
Confidence 467888888888887754 22332333566778899999988876544 366677777655 478888888888
Q ss_pred HHHHHHCC
Q 021583 182 FADMEELG 189 (310)
Q Consensus 182 ~~~m~~~g 189 (310)
+.++..+|
T Consensus 92 L~~la~sg 99 (116)
T 2p58_C 92 LNRLARSQ 99 (116)
T ss_dssp HHHHTTCC
T ss_pred HHHHHhCC
Confidence 88887766
No 250
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=69.66 E-value=40 Score=29.79 Aligned_cols=168 Identities=10% Similarity=0.023 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHC-CCCC---CHHHHHHHHHHHHhcCC-HHHHHHHHHHHHhcCCCCChHHHH-
Q 021583 89 ITVKKALKTLENEKDWKRIIQVTKWMLSK-GQGR---TMGTYFLLLNALAEDGR-LDEAEELWTKIFLDHLEGTPRIFF- 162 (310)
Q Consensus 89 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~-g~~p---~~~ty~~ll~~~~~~g~-~~~A~~~~~~m~~~~~~~~~~~~y- 162 (310)
.+...|...|.+.|+.++..+++...+.. +.-+ ..-....||+.+....+ .+.-.++..+..+..-. ...+|
T Consensus 20 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~--~~r~fl 97 (394)
T 3txn_A 20 QGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQ--EKRTFL 97 (394)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHH--TTCHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH--HHHHHH
Confidence 46778899999999999999999876532 1112 34456778888877643 45555555555543210 01234
Q ss_pred -----HHHHHHHHHcCCHHHHHHHHHHHHHCCCCCC-----HHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccchhee-c
Q 021583 163 -----DKMISIYYNRGMHEKMFEIFADMEELGVRPN-----VSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEYRYI-K 231 (310)
Q Consensus 163 -----~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~-----~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~~~~-~ 231 (310)
.-|..-|...|++.+|.+++..+.+.=-+.| ...|-.-+..|...+++.++...+..-. .+-+.+ -
T Consensus 98 r~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~---~~~~ai~~ 174 (394)
T 3txn_A 98 RQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSAR---TTANAIYC 174 (394)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH---HHHHHSCC
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHH---hhhccCCC
Confidence 2588899999999999999999876422222 1456667777889999999988875410 000110 0
Q ss_pred cCcccCChhhhhHhhhc-cCCChhhHHhhhc
Q 021583 232 GKRVRIPAKPKYELDSA-TEGKTNEVETTKN 261 (310)
Q Consensus 232 ~~~~~~~~~~~~~li~~-~~g~~~~a~~~~~ 261 (310)
...+......+..++.. ..+++..|...|-
T Consensus 175 ~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~ 205 (394)
T 3txn_A 175 PPKVQGALDLQSGILHAADERDFKTAFSYFY 205 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred CHHHHHHHHHHhhHHHHHhccCHHHHHHHHH
Confidence 01112223445555555 6777777766653
No 251
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=69.65 E-value=40 Score=26.70 Aligned_cols=58 Identities=14% Similarity=0.240 Sum_probs=45.6
Q ss_pred cCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCC
Q 021583 136 DGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN 193 (310)
Q Consensus 136 ~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~ 193 (310)
++...++.++|..|...|+-..-..-|-..-..+-..|++++|.++|+.=.+.+-+|-
T Consensus 92 ~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A~P~ 149 (202)
T 3esl_A 92 SNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNCRPY 149 (202)
T ss_dssp TTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSH
T ss_pred ccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccH
Confidence 4446788889998888888433344788888888888999999999988888888883
No 252
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=69.28 E-value=21 Score=25.91 Aligned_cols=88 Identities=11% Similarity=0.017 Sum_probs=60.5
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHH---HHHHHHHHHHCCCCC--CHHHHHHHHHH
Q 021583 129 LLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEK---MFEIFADMEELGVRP--NVSIVSMMGNA 203 (310)
Q Consensus 129 ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~---a~~l~~~m~~~g~~p--~~~ty~~li~~ 203 (310)
+++.......+..+++-|.+....+. ++..+--.+..++++...... ++.++++....+ .| .....-.|.-+
T Consensus 7 ~l~~~~~~~~l~~~~~~y~~e~~~~~--~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~-~p~~~Rd~lY~LAvg 83 (126)
T 1nzn_A 7 VLNELVSVEDLLKFEKKFQSEKAAGS--VSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKG-SKEEQRDYVFYLAVG 83 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSC--CCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTS-CHHHHHHHHHHHHHH
T ss_pred HHhccCCHHHHHHHHHHHHHHhccCC--CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-CcchHHHHHHHHHHH
Confidence 44444555566777777777666655 444455566777888887666 888888887754 24 23444455667
Q ss_pred HHhcCCHHHHHHHHHh
Q 021583 204 FQKLGMLDKYEKLKKK 219 (310)
Q Consensus 204 ~~~~g~~~~a~~l~~~ 219 (310)
+.+.|++++|.+.++.
T Consensus 84 ~yklg~Y~~A~~~~~~ 99 (126)
T 1nzn_A 84 NYRLKEYEKALKYVRG 99 (126)
T ss_dssp HHHTTCHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHH
Confidence 8999999999999875
No 253
>2nsz_A Programmed cell death protein 4; PDCD4, tumor suppressor, translation, antitumor protein; 1.15A {Mus musculus} SCOP: a.118.1.14 PDB: 2kzt_B 2hm8_A 2ggf_A
Probab=67.86 E-value=19 Score=26.17 Aligned_cols=79 Identities=10% Similarity=0.222 Sum_probs=57.7
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCC--HHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q 021583 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGM--HEKMFEIFADMEELGVRPNVSIVSMMGN 202 (310)
Q Consensus 125 ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~--~~~a~~l~~~m~~~g~~p~~~ty~~li~ 202 (310)
....+|+=|...|+.++|.+.++++..-.. .+.+++..+..++=+.+. .+.+.+++..+...|+-+.......+-+
T Consensus 9 ki~~ll~EY~~~~D~~Ea~~cl~eL~~p~f--~~e~V~~~i~~alE~~~~~~~e~~~~LL~~L~~~~~is~~q~~~Gf~~ 86 (129)
T 2nsz_A 9 EIDMLLKEYLLSGDISEAEHCLKELEVPHF--HHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQMKRGYER 86 (129)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHTCGGG--HHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhCCCcc--HHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCCcCHHHHHHHHHH
Confidence 346789999999999999999999875433 455678888888777643 4778899999998887765544443333
Q ss_pred HHH
Q 021583 203 AFQ 205 (310)
Q Consensus 203 ~~~ 205 (310)
.+.
T Consensus 87 v~~ 89 (129)
T 2nsz_A 87 IYN 89 (129)
T ss_dssp HHH
T ss_pred HHh
Confidence 333
No 254
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=67.78 E-value=20 Score=31.99 Aligned_cols=114 Identities=11% Similarity=-0.006 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHCC-CCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChH-HHHHHHHHHHHHcCCHHHHHH
Q 021583 104 WKRIIQVTKWMLSKG-QGR-TMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR-IFFDKMISIYYNRGMHEKMFE 180 (310)
Q Consensus 104 ~~~a~~~~~~m~~~g-~~p-~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~-~~y~~li~~~~~~g~~~~a~~ 180 (310)
.++-.+...+..+.. ... -..++..+.+.|.+.|+.++|.++|.++.......... ..|-.+|..+...+++..+..
T Consensus 110 l~~l~~~~~~~~~~~~~e~e~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~ 189 (429)
T 4b4t_R 110 IKELNEKIQKLEEDDEGELEQAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKE 189 (429)
T ss_dssp HHHHHHHHHHHHHCCSCCCCCSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 444445555555432 222 22466789999999999999999999999864422222 378888999999999999999
Q ss_pred HHHHHHH---CCCCCCHH----HHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 181 IFADMEE---LGVRPNVS----IVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 181 l~~~m~~---~g~~p~~~----ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
.++.... .+-.|+.. .|..+ .+...+++..|.+.|-+
T Consensus 190 ~~~ka~~~~~~~~d~~~~~~lk~~~gl--~~l~~r~f~~Aa~~f~e 233 (429)
T 4b4t_R 190 KLEAVNSMIEKGGDWERRNRYKTYYGI--HCLAVRNFKEAAKLLVD 233 (429)
T ss_dssp HHHHHHHHHTTCCCTHHHHHHHHHHHH--GGGGTSCHHHHHHHHHH
T ss_pred HHHHHHHhhhcCCCHHHHHHHHHHHHH--HHHHhChHHHHHHHHHH
Confidence 9888753 33334332 12222 23457889998888754
No 255
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=66.65 E-value=40 Score=25.54 Aligned_cols=95 Identities=9% Similarity=0.014 Sum_probs=62.3
Q ss_pred CHHHHHHHHHHHHhcCCH------HHHHHHHHHHHhcCCCCChHH-HHHHHHH---H---HHHcCCHHHHHHHHHHHHHC
Q 021583 122 TMGTYFLLLNALAEDGRL------DEAEELWTKIFLDHLEGTPRI-FFDKMIS---I---YYNRGMHEKMFEIFADMEEL 188 (310)
Q Consensus 122 ~~~ty~~ll~~~~~~g~~------~~A~~~~~~m~~~~~~~~~~~-~y~~li~---~---~~~~g~~~~a~~l~~~m~~~ 188 (310)
|..+|=..+...-+.|+. ++..++|++.... + |+... .|-..|. - |-..++.++|.++|+.+...
T Consensus 12 ~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~-~-Pp~k~~~wrrYI~LWIrYA~~~ei~D~d~aR~vy~~a~~~ 89 (161)
T 4h7y_A 12 NPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEA-L-PPDKYGQNESFARIQVRFAELKAIQEPDDARDYFQMARAN 89 (161)
T ss_dssp SHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHH-S-CGGGGTTCHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHc-C-CccccccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 445555666666666776 6777788776653 2 22211 1111111 1 12348999999999999876
Q ss_pred CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 189 GVRPNVSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 189 g~~p~~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
+-+. ...|.....-=.+.|+++.|.+++.+
T Consensus 90 hKkF-AKiwi~~AqFEiRqgnl~kARkILg~ 119 (161)
T 4h7y_A 90 CKKF-AFVHISFAQFELSQGNVKKSKQLLQK 119 (161)
T ss_dssp CTTB-HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hHHH-HHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 4444 77777777777899999999999754
No 256
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=65.88 E-value=17 Score=30.23 Aligned_cols=112 Identities=10% Similarity=0.058 Sum_probs=64.1
Q ss_pred HHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChH-HHHHHHHHHHHHcCC
Q 021583 96 KTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR-IFFDKMISIYYNRGM 174 (310)
Q Consensus 96 ~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~-~~y~~li~~~~~~g~ 174 (310)
..+.+.|+++.++.....-.+. -.-|...=..|+..+|-.|+++.|.+=++...+..-...+. ..|-.+|.+
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~-~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~a------ 77 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKA-SPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKA------ 77 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHT-CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH------
T ss_pred HHHHhCCCHHHHHHHHHHHHHh-CCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHHHH------
Confidence 4556778888887777765555 24456666677888888888888877777766653211111 144444443
Q ss_pred HHHHHHHHHHHHHCCCCCC-----HHHHHHHHHHHH--hcCCHHHHHHHHH
Q 021583 175 HEKMFEIFADMEELGVRPN-----VSIVSMMGNAFQ--KLGMLDKYEKLKK 218 (310)
Q Consensus 175 ~~~a~~l~~~m~~~g~~p~-----~~ty~~li~~~~--~~g~~~~a~~l~~ 218 (310)
+..=.+....+..|. ..-...|+.+.. ..|+.++|..+-.
T Consensus 78 ----E~~R~~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~ 124 (273)
T 1zbp_A 78 ----AQARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELAL 124 (273)
T ss_dssp ----HHHHHHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred ----HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 222333333333321 233455555544 3588888777654
No 257
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=63.32 E-value=29 Score=26.15 Aligned_cols=53 Identities=4% Similarity=0.071 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC
Q 021583 140 DEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP 192 (310)
Q Consensus 140 ~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p 192 (310)
+++.++|..|...++-..-..-|-..-..+-..|++++|.++|+.=.+.+-+|
T Consensus 82 ~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P 134 (152)
T 4a1g_A 82 SDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAEP 134 (152)
T ss_dssp SCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBS
T ss_pred CCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc
Confidence 44788888888888743334478888888888888888888888888888777
No 258
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=60.66 E-value=24 Score=26.99 Aligned_cols=53 Identities=15% Similarity=0.159 Sum_probs=35.3
Q ss_pred HHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCC
Q 021583 141 EAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPN 193 (310)
Q Consensus 141 ~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~ 193 (310)
.+.++|..|...++-..-..-|-..-..+-..|++.+|.++|..-.+.+-+|-
T Consensus 78 ~p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A~P~ 130 (164)
T 2wvi_A 78 EPLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAEPL 130 (164)
T ss_dssp CHHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSH
T ss_pred CHHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcH
Confidence 35667777777776322234666666667777777777777777777776764
No 259
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=59.90 E-value=1.5e+02 Score=30.01 Aligned_cols=126 Identities=12% Similarity=-0.000 Sum_probs=84.8
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCC-----------------------CCHHHHHHHHHHHHhcCCHHHHH
Q 021583 87 PLITVKKALKTLENEKDWKRIIQVTKWMLSKGQG-----------------------RTMGTYFLLLNALAEDGRLDEAE 143 (310)
Q Consensus 87 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~-----------------------p~~~ty~~ll~~~~~~g~~~~A~ 143 (310)
+....=.+-.+|...|++++|.+.|++.. .|+. .-..=|.-++..+-+.|..+.+.
T Consensus 841 ~~~~~yl~g~~~L~~ge~~~A~~~F~kaa-~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi 919 (1139)
T 4fhn_B 841 DPIAVYLKALIYLKSKEAVKAVRCFKTTS-LVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDAL 919 (1139)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHTCC-CSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHH
T ss_pred CcHHHHHHHHHHHhcCCHHHHHHHHHHHh-hhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHH
Confidence 33333345567788899999999997532 1110 01123677788888888888888
Q ss_pred HHHHHHHhcCCCCChH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHH
Q 021583 144 ELWTKIFLDHLEGTPR---IFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEK 215 (310)
Q Consensus 144 ~~~~~m~~~~~~~~~~---~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~ 215 (310)
++-+.-.+..-...+. ..|..+.+++...|++++|...+-.+.....+ .....-|+..+|..|.+++-..
T Consensus 920 ~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~pd~~~r--~~cLr~LV~~lce~~~~~~L~~ 992 (1139)
T 4fhn_B 920 EFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVLSTTPLK--KSCLLDFVNQLTKQGKINQLLN 992 (1139)
T ss_dssp HHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHHHHSSSC--HHHHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHhCCChhhhhC
Confidence 8877665543311221 25888999999999999999888888765433 4667778888887777766443
No 260
>2ion_A PDCD4, programmed cell death 4, PDCD4; alpha-helical, antitumor protein; 1.57A {Mus musculus} SCOP: a.118.1.14 PDB: 2ios_A 2iol_A
Probab=59.39 E-value=19 Score=27.16 Aligned_cols=79 Identities=10% Similarity=0.222 Sum_probs=57.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCC--HHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q 021583 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGM--HEKMFEIFADMEELGVRPNVSIVSMMGN 202 (310)
Q Consensus 125 ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~--~~~a~~l~~~m~~~g~~p~~~ty~~li~ 202 (310)
..+.+|+=|...|+.++|.+.++++..-.. .+.+++.++..++=+.++ .+.+.+++..+...|+-+.......+-.
T Consensus 11 ki~~lL~EY~~~~D~~EA~~cl~EL~~p~f--~~e~V~~~i~~alE~~~~~~re~~~~LL~~L~~~~~is~~q~~~Gf~~ 88 (152)
T 2ion_A 11 EIDMLLKEYLLSGDISEAEHCLKELEVPHF--HHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQMKRGYER 88 (152)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHTCGGG--HHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhCCCcc--hHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCCcCHHHHHHHHHH
Confidence 456789999999999999999999975443 455678888888876433 5678889999988887665544343333
Q ss_pred HHH
Q 021583 203 AFQ 205 (310)
Q Consensus 203 ~~~ 205 (310)
.+.
T Consensus 89 vl~ 91 (152)
T 2ion_A 89 IYN 91 (152)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 261
>3eiq_C Programmed cell death protein 4; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Mus musculus}
Probab=57.05 E-value=32 Score=29.91 Aligned_cols=82 Identities=10% Similarity=0.225 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCC--HHHHHHHHHHHHHCCCCCCHHHHHHHH
Q 021583 124 GTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGM--HEKMFEIFADMEELGVRPNVSIVSMMG 201 (310)
Q Consensus 124 ~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~--~~~a~~l~~~m~~~g~~p~~~ty~~li 201 (310)
...+.+|.=|...|+.++|.+.++++..-.. ...+++.++..++=+.++ .+.+.+++..+...|+.+.......+.
T Consensus 218 kki~~lL~EY~~s~D~~EA~~ci~EL~~p~f--hhe~V~~av~~aLE~~~~~~re~~~~LL~~L~~~glls~~q~~~Gf~ 295 (358)
T 3eiq_C 218 KEIDMLLKEYLLSGDISEAEHCLKELEVPHF--HHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQMKRGYE 295 (358)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHCCTTC--HHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCHHHHHHHHHHccCCcc--hHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Confidence 3458889999999999999999999875443 455677777777766443 466888898888888776555555444
Q ss_pred HHHHhc
Q 021583 202 NAFQKL 207 (310)
Q Consensus 202 ~~~~~~ 207 (310)
+.+...
T Consensus 296 ~vl~~l 301 (358)
T 3eiq_C 296 RIYNEI 301 (358)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 444433
No 262
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=52.74 E-value=30 Score=27.90 Aligned_cols=53 Identities=23% Similarity=0.508 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC
Q 021583 140 DEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRP 192 (310)
Q Consensus 140 ~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p 192 (310)
+++.++|..|...++-..-..-|-..-..+-..|++.+|.++|+.=.+.+-+|
T Consensus 131 ~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P 183 (223)
T 4aez_C 131 DEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAKP 183 (223)
T ss_dssp SCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCBS
T ss_pred CCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc
Confidence 56778888888888743334478888888888888888888888888887777
No 263
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=51.96 E-value=82 Score=26.17 Aligned_cols=54 Identities=17% Similarity=0.156 Sum_probs=31.6
Q ss_pred HHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 021583 132 ALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEE 187 (310)
Q Consensus 132 ~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~ 187 (310)
...+.|.+++|++....-.+.. |.|...-..|+.-+|-.|++++|.+-++...+
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~--P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~ 59 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKAS--PKDASLRSSFIELLCIDGDFERADEQLMQSIK 59 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTC--TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhC--CcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 3445666666666665555443 34444556666666666666666666655544
No 264
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=51.67 E-value=1.7e+02 Score=28.18 Aligned_cols=116 Identities=9% Similarity=-0.049 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHC------CCCC-CHH-------HH---HHHH
Q 021583 69 KEEVYGALDSFIAWELEFPLITVKKALKTLENEKD-WKRIIQVTKWMLSK------GQGR-TMG-------TY---FLLL 130 (310)
Q Consensus 69 ~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~-~~~a~~~~~~m~~~------g~~p-~~~-------ty---~~ll 130 (310)
.+.+..+|+++....-..+......+|..+.+.++ --+|.+++.+..+. ...+ +.. .+ +.=.
T Consensus 265 ~~~a~~~le~L~~~~p~~~~~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~~Qa 344 (754)
T 4gns_B 265 VDFTIDYLKGLTKKDPIHDIYYKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLNIQT 344 (754)
T ss_dssp HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHHHHH
Confidence 45667888888776532233333344444433332 22345555443321 1111 211 11 1113
Q ss_pred HHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 021583 131 NALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADME 186 (310)
Q Consensus 131 ~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~ 186 (310)
+.|...|+++-|+++-++-.... |..-.+|-.|...|...|+++.|+-.++.+.
T Consensus 345 ~FLl~K~~~elAL~~Ak~AV~~a--PseF~tW~~La~vYi~l~d~e~ALLtLNScP 398 (754)
T 4gns_B 345 NFLLNRGDYELALGVSNTSTELA--LDSFESWYNLARCHIKKEEYEKALFAINSMP 398 (754)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHC--SSCHHHHHHHHHHHHHTTCHHHHHHHHHHSC
T ss_pred HHHhccCcHHHHHHHHHHHHhcC--chhhHHHHHHHHHHHHhccHHHHHHHHhcCC
Confidence 44567899999999999987763 2334599999999999999999999999873
No 265
>2zu6_B Programmed cell death protein 4; protein-protein complex, ATP-binding, helicase, hydrolase, initiation factor, nucleotide-binding; 2.80A {Homo sapiens} PDB: 3eij_A
Probab=51.49 E-value=33 Score=29.13 Aligned_cols=78 Identities=12% Similarity=0.228 Sum_probs=54.8
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCC--HHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q 021583 125 TYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGM--HEKMFEIFADMEELGVRPNVSIVSMMGN 202 (310)
Q Consensus 125 ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~--~~~a~~l~~~m~~~g~~p~~~ty~~li~ 202 (310)
....+|.=|...|+.++|.+.++++..-.. .+.+++.++..++=+.++ .+.+.+++..+.+.|+-+......-+-+
T Consensus 168 ki~~lL~EY~~~~D~~EA~~ci~EL~~p~f--~~e~V~~ai~~alE~~~~~~re~~~~LL~~L~~~~~ls~~q~~~Gf~~ 245 (307)
T 2zu6_B 168 EIDMLLKEYLLSGDISEAEHCLKELEVPHF--HHELVYEAIIMVLESTGESTFKMILDLLKSLWKSSTITVDQMKRGYER 245 (307)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHCCGGG--HHHHHHHHHHHHHTCCSSHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHcCCCcc--hHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Confidence 346788889999999999999999875443 445677777777776543 4667788888887777655444333333
Q ss_pred HH
Q 021583 203 AF 204 (310)
Q Consensus 203 ~~ 204 (310)
.+
T Consensus 246 vl 247 (307)
T 2zu6_B 246 IY 247 (307)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 266
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=51.01 E-value=81 Score=24.91 Aligned_cols=58 Identities=9% Similarity=0.071 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 161 FFDKMISIYYNRGMHEKMFEIFADMEELGVRPN-VSIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 161 ~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~-~~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
.|-..+..+ .++...++.++|..|..+||--. +.-|......+...|++.+|..+|+.
T Consensus 82 lWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~ 140 (202)
T 3esl_A 82 IWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLEL 140 (202)
T ss_dssp HHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 566666654 24557799999999998877654 68899999999999999999999864
No 267
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=48.82 E-value=79 Score=23.37 Aligned_cols=66 Identities=20% Similarity=0.205 Sum_probs=47.9
Q ss_pred HHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHH
Q 021583 145 LWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212 (310)
Q Consensus 145 ~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~ 212 (310)
+-+.|++.|++ .+.---.++..+...+.+-.|.++++.+.+.+-..+..|.---++.+...|-+.+
T Consensus 14 ~~~~l~~~g~r--~T~qR~~IL~~l~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~~ 79 (150)
T 2xig_A 14 LRMSIKKNGLK--NSKQREEVVSVLYRSGTHLSPEEITHSIRQKDKNTSISSVYRILNFLEKENFISV 79 (150)
T ss_dssp HHHHHHHCC----CHHHHHHHHHHHHHCSSCBCHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHcCCC--CCHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCcEEE
Confidence 33456778874 2234566777777778888999999999988777777666666788888888765
No 268
>1ug3_A EIF4GI, eukaryotic protein synthesis initiation factor 4G; heat repeat, translation; 2.24A {Homo sapiens} SCOP: a.118.1.14 a.118.1.14
Probab=47.76 E-value=65 Score=27.61 Aligned_cols=129 Identities=11% Similarity=0.020 Sum_probs=70.4
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHHhcCCCCChHH--HHHHHH
Q 021583 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDG-RLDEAEELWTKIFLDHLEGTPRI--FFDKMI 166 (310)
Q Consensus 90 ~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g-~~~~A~~~~~~m~~~~~~~~~~~--~y~~li 166 (310)
....++.-|...|+.++|.+-++++..... ....++..+..++-+.. ..+.+..++..+.+.++-+.+.. .|..++
T Consensus 13 ~~~~ll~Ey~~~~d~~Ea~~ci~el~~p~~-~~~~v~~~i~~~le~~~~~re~~~~Ll~~L~~~~~is~~~~~~Gf~~~~ 91 (339)
T 1ug3_A 13 KSKAIIEEYLHLNDMKEAVQCVQELASPSL-LFIFVRHGVESTLERSAIAREHMGQLLHQLLCAGHLSTAQYYQGLYEIL 91 (339)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHTTCCGGG-HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHcCCccc-HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Confidence 356788888888999988888877653322 12334444444444322 23456667777777766322211 233343
Q ss_pred HHHHHc-CCHHHHHHHHHHHHH----CCCCCCHH-----------------HHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 167 SIYYNR-GMHEKMFEIFADMEE----LGVRPNVS-----------------IVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 167 ~~~~~~-g~~~~a~~l~~~m~~----~g~~p~~~-----------------ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
...-.. =++..|...+.++.. .|+.|-.. ....++..+.+....+.+.++|++
T Consensus 92 ~~l~Dl~lDiP~a~~~La~~v~~~i~~g~l~~~~l~~~~~~~l~~~g~~~~fl~~vl~~l~~~~g~~~l~~~~~~ 166 (339)
T 1ug3_A 92 ELAEDMEIDIPHVWLYLAELVTPILQEGGVPMGELFREITKPLRPLGKAASLLLEILGLLCKSMGPKKVGTLWRE 166 (339)
T ss_dssp HHHHHHTTTCTTHHHHHHHHHGGGGSTTSCCHHHHHHHHTTTHHHHTCHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred hhChHhhcCccchHHHHHHHHHHHHHCCCCCHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 333322 255556666666543 34443211 133455566666677777777765
No 269
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=47.01 E-value=1.5e+02 Score=26.06 Aligned_cols=93 Identities=10% Similarity=0.029 Sum_probs=59.3
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHCCCCC-----CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC--CCCChHH-HHHH
Q 021583 93 KALKTLENEKDWKRIIQVTKWMLSKGQGR-----TMGTYFLLLNALAEDGRLDEAEELWTKIFLDH--LEGTPRI-FFDK 164 (310)
Q Consensus 93 ~li~~~~~~~~~~~a~~~~~~m~~~g~~p-----~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~--~~~~~~~-~y~~ 164 (310)
.+...|...|++.+|.+++..+.+.--+. -...|-.-++.|...+++.++...+....... +.++|.+ ..--
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 67888889999999988888877532221 24556667788888899988888887665432 2123322 1111
Q ss_pred HHHH--HH-HcCCHHHHHHHHHHH
Q 021583 165 MISI--YY-NRGMHEKMFEIFADM 185 (310)
Q Consensus 165 li~~--~~-~~g~~~~a~~l~~~m 185 (310)
...| +. ..+++..|...|-+-
T Consensus 184 ~~~Gi~~l~~~rdyk~A~~~F~ea 207 (394)
T 3txn_A 184 LQSGILHAADERDFKTAFSYFYEA 207 (394)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHhhHHHHHhccCHHHHHHHHHHH
Confidence 1111 23 567888887776664
No 270
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=46.96 E-value=1.2e+02 Score=30.67 Aligned_cols=126 Identities=9% Similarity=0.037 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHH
Q 021583 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRT----MGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDK 164 (310)
Q Consensus 89 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~----~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~ 164 (310)
.-|..++..|-+.+.++.+.++-....+..-.-+ ...|..+.+++..-|++++|...+-.+.....+ ......
T Consensus 900 ~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~pd~~~r---~~cLr~ 976 (1139)
T 4fhn_B 900 CYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVLSTTPLK---KSCLLD 976 (1139)
T ss_dssp HHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHHHHSSSC---HHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhCCCHHHH---HHHHHH
Confidence 4588999999999999999988877554322212 235888999999999999999999988877653 346788
Q ss_pred HHHHHHHcCCHHHHH------------HHHHHHHHCC--CCCCHHHHHHHHHHHHhcCCHHHHHHHH
Q 021583 165 MISIYYNRGMHEKMF------------EIFADMEELG--VRPNVSIVSMMGNAFQKLGMLDKYEKLK 217 (310)
Q Consensus 165 li~~~~~~g~~~~a~------------~l~~~m~~~g--~~p~~~ty~~li~~~~~~g~~~~a~~l~ 217 (310)
||...|..|..+... +++....++. ......-|..|-.-+...|++.+|-.++
T Consensus 977 LV~~lce~~~~~~L~~lpf~gl~~~Vd~IL~~kAr~~~~~~~~p~Yy~iLYs~ri~r~dyR~AA~vm 1043 (1139)
T 4fhn_B 977 FVNQLTKQGKINQLLNYSMPTLRQDVDNLLERKAFQMINVESQPCWYNILFSWRYKHQNYRDAAAII 1043 (1139)
T ss_dssp HHHHHHHHCCHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHhCCChhhhhCCCCccHHHHHHHHHHHHHHhCCccccCCCHHHHhHhhhhccCChHHHHHHH
Confidence 888888777665543 3333322111 1111234666666678888888876664
No 271
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=46.69 E-value=69 Score=23.71 Aligned_cols=59 Identities=12% Similarity=0.099 Sum_probs=24.8
Q ss_pred HHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCC
Q 021583 79 FIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGR 138 (310)
Q Consensus 79 m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~ 138 (310)
+.+.|++++..=. .++..+...+.+-.|.++++.+.+.+-..+..|.=--|+.+...|-
T Consensus 18 l~~~g~r~T~qR~-~IL~~l~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Gl 76 (150)
T 2xig_A 18 IKKNGLKNSKQRE-EVVSVLYRSGTHLSPEEITHSIRQKDKNTSISSVYRILNFLEKENF 76 (150)
T ss_dssp HHHCC--CHHHHH-HHHHHHHHCSSCBCHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTTS
T ss_pred HHHcCCCCCHHHH-HHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCc
Confidence 3444554443322 3344444444445555555555544433444333333444444443
No 272
>2fu4_A Ferric uptake regulation protein; DNA binding domain, helix-turn-helix, DNA binding protein; 1.80A {Escherichia coli}
Probab=46.58 E-value=56 Score=21.04 Aligned_cols=59 Identities=19% Similarity=0.275 Sum_probs=30.3
Q ss_pred HHHcCCCCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCC
Q 021583 79 FIAWELEFPLITVKKALKTLENEK-DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGR 138 (310)
Q Consensus 79 m~~~~~~p~~~~~~~li~~~~~~~-~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~ 138 (310)
+.+.|++.+..-. .++..+...+ .+-.+.++++.+.+.+...+..|---.|+.+.+.|-
T Consensus 8 l~~~g~~~t~~r~-~IL~~l~~~~~~~~s~~el~~~l~~~~~~is~~TVyR~L~~L~~~Gl 67 (83)
T 2fu4_A 8 LKKAGLKVTLPRL-KILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLNQFDDAGI 67 (83)
T ss_dssp HHHTTCCCCHHHH-HHHHHHTSGGGSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTS
T ss_pred HHHcCCCcCHHHH-HHHHHHHhCCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCC
Confidence 4455655554432 3444444433 344556666666555544555555555555555554
No 273
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=46.37 E-value=84 Score=23.01 Aligned_cols=17 Identities=6% Similarity=0.063 Sum_probs=7.9
Q ss_pred cCCHHHHHHHHHHHHhc
Q 021583 136 DGRLDEAEELWTKIFLD 152 (310)
Q Consensus 136 ~g~~~~A~~~~~~m~~~ 152 (310)
.+..-.|.++++.+.+.
T Consensus 34 ~~~~~sa~ei~~~l~~~ 50 (145)
T 2fe3_A 34 SMAHPTADDIYKALEGK 50 (145)
T ss_dssp CSSCCCHHHHHHHHGGG
T ss_pred CCCCCCHHHHHHHHHHh
Confidence 33344455555555444
No 274
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=45.03 E-value=1.4e+02 Score=25.25 Aligned_cols=159 Identities=8% Similarity=0.019 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHH----HHHHHHHhcCCCCChHHHHHH
Q 021583 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAE----ELWTKIFLDHLEGTPRIFFDK 164 (310)
Q Consensus 89 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~----~~~~~m~~~~~~~~~~~~y~~ 164 (310)
..|.++..-|.+++++++|.+++..-. ..+.+.|+...|- -+.+-..+.+. +++...-+-
T Consensus 34 Q~~Rtl~~Ry~~~~~~~eAidlL~~ga---------------~~ll~~~Q~~sa~DLa~llvev~~~~~~-~~~~~~~~r 97 (312)
T 2wpv_A 34 QTLRTIANRYVRSKSYEHAIELISQGA---------------LSFLKAKQGGSGTDLIFYLLEVYDLAEV-KVDDISVAR 97 (312)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHHHHTTCHHHHHHHHHHHHHHHHHTTC-CCSHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHH---------------HHHHHCCCcchHHHHHHHHHHHHHHcCC-CCCHHHHHH
Confidence 467888888888889988888875421 1223334433332 23444444455 344445555
Q ss_pred HHHHHHHcCCHH-HHHHHHHHHHH----CCC--CCCHHHHHHHHHHHHhcCCHHHHHHHHHhCCC-Cccchh-----eec
Q 021583 165 MISIYYNRGMHE-KMFEIFADMEE----LGV--RPNVSIVSMMGNAFQKLGMLDKYEKLKKKYPP-PKWEYR-----YIK 231 (310)
Q Consensus 165 li~~~~~~g~~~-~a~~l~~~m~~----~g~--~p~~~ty~~li~~~~~~g~~~~a~~l~~~~~p-~~~~~~-----~~~ 231 (310)
|+.-+......+ .=.++.+.+.+ .|- .-|......+-..|.+.|++.+|++.|-.... +...+. +..
T Consensus 98 l~~l~~~~p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~ 177 (312)
T 2wpv_A 98 LVRLIAELDPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLC 177 (312)
T ss_dssp HHHHHTTCCTTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHH
Confidence 555544433211 12344444431 222 12566677888888899999999888743221 111111 221
Q ss_pred cC--c--ccCChhhhhHhhhc-cCCChhhHHhhhchh
Q 021583 232 GK--R--VRIPAKPKYELDSA-TEGKTNEVETTKNPN 263 (310)
Q Consensus 232 ~~--~--~~~~~~~~~~li~~-~~g~~~~a~~~~~~m 263 (310)
.. + ...+.....+++-. ..|+...|..+++..
T Consensus 178 ~~~~~~~~e~dlf~~RaVL~yL~l~n~~~A~~~~~~f 214 (312)
T 2wpv_A 178 QVDDIEDSTVAEFFSRLVFNYLFISNISFAHESKDIF 214 (312)
T ss_dssp HTTCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHH
T ss_pred hcCCCCcchHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 11 2 22344444445444 678888888877644
No 275
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=45.01 E-value=81 Score=23.10 Aligned_cols=65 Identities=14% Similarity=0.073 Sum_probs=48.4
Q ss_pred HHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHH
Q 021583 146 WTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212 (310)
Q Consensus 146 ~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~ 212 (310)
-+.|++.|++.. ..--.++..+...+.+-.|.++++.+.+.+-..+..|.---++.+...|-+.+
T Consensus 10 ~~~l~~~g~r~T--~qR~~Il~~L~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~~ 74 (145)
T 2fe3_A 10 LETLKETGVRIT--PQRHAILEYLVNSMAHPTADDIYKALEGKFPNMSVATVYNNLRVFRESGLVKE 74 (145)
T ss_dssp HHHHHHTTCCCC--HHHHHHHHHHHHCSSCCCHHHHHHHHGGGCTTCCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHcCCCCC--HHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCChhhHHHHHHHHHHCCCEEE
Confidence 345677888533 34556677777777888899999999988777777776667788888888765
No 276
>1mzb_A Ferric uptake regulation protein; ferric uptake regulator, iron, DTXR, gene regulation; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.42
Probab=44.77 E-value=74 Score=22.99 Aligned_cols=60 Identities=20% Similarity=0.274 Sum_probs=32.9
Q ss_pred HHHcCCCCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCH
Q 021583 79 FIAWELEFPLITVKKALKTLENEK-DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRL 139 (310)
Q Consensus 79 m~~~~~~p~~~~~~~li~~~~~~~-~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~ 139 (310)
+.+.|++++..=. .++..+...+ .+-.|.++++.+.+.+-..+..|.=--|+.+...|-+
T Consensus 9 l~~~g~r~T~qR~-~Il~~L~~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv 69 (136)
T 1mzb_A 9 LRKAGLKVTLPRV-KILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLV 69 (136)
T ss_dssp HHHTTCCCCHHHH-HHHHHHHCC-CCSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTSE
T ss_pred HHHCCCCCCHHHH-HHHHHHHhCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHHHHHCCcE
Confidence 4556666665433 3444454444 5556777777776665555555544445555555544
No 277
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=41.48 E-value=45 Score=20.56 Aligned_cols=36 Identities=6% Similarity=-0.006 Sum_probs=29.5
Q ss_pred CChhhhhHhhhccCCChhhHHhhhchhhcCCCCCch
Q 021583 237 IPAKPKYELDSATEGKTNEVETTKNPNESSEEPEAA 272 (310)
Q Consensus 237 ~~~~~~~~li~~~~g~~~~a~~~~~~m~~~~~~p~~ 272 (310)
.+..+....+.+..|+.+.|.+.+-.|...+..|+.
T Consensus 23 ld~~~I~~vL~a~~gdvd~aI~~LL~m~~~~~~~~~ 58 (59)
T 1wgl_A 23 MDQEVIRSVLEAQRGNKDAAINSLLQMGEEPSGPSS 58 (59)
T ss_dssp SCHHHHHHHHTTTTTCHHHHHHHHHHSSCCCCSCCC
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHHHcCcCCCCCCCC
Confidence 566667778888899999999999999888777753
No 278
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=40.81 E-value=18 Score=22.41 Aligned_cols=31 Identities=19% Similarity=0.214 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHhcCCCCChHHHHHHHHHHH-HH
Q 021583 140 DEAEELWTKIFLDHLEGTPRIFFDKMISIY-YN 171 (310)
Q Consensus 140 ~~A~~~~~~m~~~~~~~~~~~~y~~li~~~-~~ 171 (310)
++|++.|.+|++.+- ..+.-||...|... ++
T Consensus 3 eEae~aF~~lL~~~~-V~s~wsweqamr~i~i~ 34 (59)
T 2b7e_A 3 MEAEKEFITMLKENQ-VDSTWSFSRIISELGTR 34 (59)
T ss_dssp THHHHHHHHHHHHTT-CCSSCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcC-CCCCCcHHHHHHHhccC
Confidence 466666666665543 13335677766666 44
No 279
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=40.37 E-value=64 Score=25.74 Aligned_cols=133 Identities=8% Similarity=-0.029 Sum_probs=65.3
Q ss_pred HHHHHHHHcCCCCCHH---HHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHH--HHHHHHHHHHhcCCHHHHHHHHHH
Q 021583 74 GALDSFIAWELEFPLI---TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMG--TYFLLLNALAEDGRLDEAEELWTK 148 (310)
Q Consensus 74 ~~~~~m~~~~~~p~~~---~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~--ty~~ll~~~~~~g~~~~A~~~~~~ 148 (310)
++++.+.+.|..++.. .-.+.+...+..|+.+ +++.+.+.|..++.. .-.+.+...+..|+.+-+ +.
T Consensus 19 ~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~----~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v----~~ 90 (285)
T 1wdy_A 19 DLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSRED----IVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLL----KL 90 (285)
T ss_dssp HHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHH----HHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHH----HH
T ss_pred HHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHH----HHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHH----HH
Confidence 4455566666554422 1123455556667764 444445566555421 112344555566776544 44
Q ss_pred HHhcCCCC--ChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHH------------HHHHHHHHHhcCCHHHHH
Q 021583 149 IFLDHLEG--TPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSI------------VSMMGNAFQKLGMLDKYE 214 (310)
Q Consensus 149 m~~~~~~~--~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~t------------y~~li~~~~~~g~~~~a~ 214 (310)
+.+.|... .+...++.| ...+..|+.+-+ +.+.+.|..++... -.+.+...+..|+.+-+.
T Consensus 91 Ll~~g~~~~~~~~~g~t~L-~~A~~~~~~~~~----~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~ 165 (285)
T 1wdy_A 91 FLSKGADVNECDFYGFTAF-MEAAVYGKVKAL----KFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLK 165 (285)
T ss_dssp HHHTTCCTTCBCTTCCBHH-HHHHHTTCHHHH----HHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHH
T ss_pred HHHcCCCCCccCcccCCHH-HHHHHhCCHHHH----HHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHH
Confidence 44445421 111223333 334566765544 44444555443210 113444556778888888
Q ss_pred HHHHh
Q 021583 215 KLKKK 219 (310)
Q Consensus 215 ~l~~~ 219 (310)
.+++.
T Consensus 166 ~Ll~~ 170 (285)
T 1wdy_A 166 ILLDE 170 (285)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 88764
No 280
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2
Probab=39.98 E-value=1.3e+02 Score=24.26 Aligned_cols=22 Identities=0% Similarity=-0.080 Sum_probs=12.8
Q ss_pred HHHHHHhcCCHHHHHHHHHHHH
Q 021583 94 ALKTLENEKDWKRIIQVTKWML 115 (310)
Q Consensus 94 li~~~~~~~~~~~a~~~~~~m~ 115 (310)
-+..+....++++|.++.++.+
T Consensus 24 eLDv~IA~r~feeAv~lle~~~ 45 (235)
T 2d2s_A 24 EIDIELARLRFESAVETLLDIE 45 (235)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHH
Confidence 3555556666666666665544
No 281
>2w57_A Ferric uptake regulation protein; gene regulation, transcription regulation, transport, iron, repressor, DNA-binding, transcription; 2.60A {Vibrio cholerae}
Probab=39.77 E-value=82 Score=23.27 Aligned_cols=60 Identities=18% Similarity=0.274 Sum_probs=26.9
Q ss_pred HHHcCCCCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCH
Q 021583 79 FIAWELEFPLITVKKALKTLENEK-DWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGRL 139 (310)
Q Consensus 79 m~~~~~~p~~~~~~~li~~~~~~~-~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~ 139 (310)
+.+.|++++..=. .++..+...+ .+-.|.++++.+.+.+-..+..|.=--|+.+...|-+
T Consensus 8 l~~~g~r~T~qR~-~Il~~L~~~~~~h~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv 68 (150)
T 2w57_A 8 LKDAGLKVTLPRL-KILEVLQQPECQHISAEELYKKLIDLGEEIGLATVYRVLNQFDDAGIV 68 (150)
T ss_dssp HHHTTCCCCHHHH-HHHHHHTSGGGSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTSE
T ss_pred HHHcCCCCCHHHH-HHHHHHHhCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHCCcE
Confidence 4445555554322 2333333333 3445555555555554444444333334444444443
No 282
>1mzb_A Ferric uptake regulation protein; ferric uptake regulator, iron, DTXR, gene regulation; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.42
Probab=38.61 E-value=80 Score=22.82 Aligned_cols=63 Identities=14% Similarity=0.182 Sum_probs=45.3
Q ss_pred HHHhcCCCCChHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHH
Q 021583 148 KIFLDHLEGTPRIFFDKMISIYYNRG-MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212 (310)
Q Consensus 148 ~m~~~~~~~~~~~~y~~li~~~~~~g-~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~ 212 (310)
.|++.|++.. ..--.++..+...+ .+-.|.++++.+.+.+-..+..|.---++.+...|-+.+
T Consensus 8 ~l~~~g~r~T--~qR~~Il~~L~~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~~ 71 (136)
T 1mzb_A 8 ELRKAGLKVT--LPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVR 71 (136)
T ss_dssp HHHHTTCCCC--HHHHHHHHHHHCC-CCSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTSEEE
T ss_pred HHHHCCCCCC--HHHHHHHHHHHhCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHHHHHCCcEEE
Confidence 4667787533 33456666666666 788899999999998777787776666777888887765
No 283
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=37.98 E-value=72 Score=23.42 Aligned_cols=65 Identities=14% Similarity=0.124 Sum_probs=45.4
Q ss_pred HHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHH
Q 021583 145 LWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212 (310)
Q Consensus 145 ~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~ 212 (310)
+-+.+++.|++..+ --..++..+...+ +-.|.++++.+.+.+-..+..|.---++.+...|-+.+
T Consensus 6 ~~~~L~~~g~r~T~--qR~~Il~~l~~~~-h~ta~ei~~~l~~~~~~is~~TVYR~L~~L~e~Glv~~ 70 (145)
T 3eyy_A 6 WKSDLRQRGYRLTP--QRQLVLEAVDTLE-HATPDDILGEVRKTASGINISTVYRTLELLEELGLVSH 70 (145)
T ss_dssp HHHHHHTTTCCCCH--HHHHHHHHHHHHS-SBCHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHTSEEE
T ss_pred HHHHHHHcCCCcCH--HHHHHHHHHHhcC-CCCHHHHHHHHHhhCCCCCHhHHHHHHHHHHHCCcEEE
Confidence 34456777886333 3445555555666 77899999999988877787666666777888887754
No 284
>3vu7_H DNA repair protein REV1; DNA replication, translesion DNA synthesis, damage tolerance, DNA repair, replication; HET: DNA; 2.80A {Homo sapiens} PDB: 2lsj_A*
Probab=34.11 E-value=1.1e+02 Score=22.10 Aligned_cols=43 Identities=26% Similarity=0.230 Sum_probs=29.0
Q ss_pred HHHHHHHHHcCCCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 021583 73 YGALDSFIAWELEFP---LITVKKALKTLENEKDWKRIIQVTKWML 115 (310)
Q Consensus 73 ~~~~~~m~~~~~~p~---~~~~~~li~~~~~~~~~~~a~~~~~~m~ 115 (310)
..++.+|....-.|. +..+...+.-+.+.++++++..++.+|.
T Consensus 42 K~lL~~Wv~s~~~P~~~DV~~l~~yL~~lVeek~Lek~~~vlk~l~ 87 (124)
T 3vu7_H 42 KTLLREWITTISDPMEEDILQVVKYCTDLIEEKDLEKLDLVIKYMK 87 (124)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHHHHhhcccHHHHHHHHHHHH
Confidence 666777765433464 4455555666677888888888877764
No 285
>4fjo_A DNA repair protein REV1; translesion synthesis, transferase -DNA binding protein COMP transferase-DNA binding protein complex; HET: DNA; 2.72A {Mus musculus} PDB: 2lsg_A* 2lsk_A* 2lsy_A*
Probab=33.42 E-value=1.1e+02 Score=20.77 Aligned_cols=46 Identities=24% Similarity=0.263 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHcCCCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 021583 70 EEVYGALDSFIAWELEFP---LITVKKALKTLENEKDWKRIIQVTKWML 115 (310)
Q Consensus 70 ~~~~~~~~~m~~~~~~p~---~~~~~~li~~~~~~~~~~~a~~~~~~m~ 115 (310)
.++..++.+|....-.|. +..+..-+..+.+.++.+++..+..++.
T Consensus 12 ~dvr~~l~~Wv~~~~~P~~~DV~~l~~yL~~lv~~~~lek~~~vlk~l~ 60 (97)
T 4fjo_A 12 SDVKTLLKEWITTISDPMEEDILQVVRYCTDLIEEKDLEKLDLVIKYMK 60 (97)
T ss_dssp HHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhhccCHHHHHHHHHHHH
Confidence 344667777776544564 4455555666667788888887777653
No 286
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=33.11 E-value=1.1e+02 Score=22.38 Aligned_cols=14 Identities=0% Similarity=-0.225 Sum_probs=6.4
Q ss_pred HHHHHHHHHHHHCC
Q 021583 105 KRIIQVTKWMLSKG 118 (310)
Q Consensus 105 ~~a~~~~~~m~~~g 118 (310)
-.|.++++.+.+.+
T Consensus 34 ~ta~ei~~~l~~~~ 47 (145)
T 3eyy_A 34 ATPDDILGEVRKTA 47 (145)
T ss_dssp BCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHhhC
Confidence 34444444444443
No 287
>2w57_A Ferric uptake regulation protein; gene regulation, transcription regulation, transport, iron, repressor, DNA-binding, transcription; 2.60A {Vibrio cholerae}
Probab=32.59 E-value=96 Score=22.90 Aligned_cols=65 Identities=17% Similarity=0.170 Sum_probs=46.4
Q ss_pred HHHHHhcCCCCChHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHH
Q 021583 146 WTKIFLDHLEGTPRIFFDKMISIYYNRG-MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212 (310)
Q Consensus 146 ~~~m~~~~~~~~~~~~y~~li~~~~~~g-~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~ 212 (310)
.+.|++.|++..+ .--.++..+...+ .+-.|.++++.+.+.+-..+..|.---|+.+...|-+.+
T Consensus 5 ~~~l~~~g~r~T~--qR~~Il~~L~~~~~~h~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~~ 70 (150)
T 2w57_A 5 NQALKDAGLKVTL--PRLKILEVLQQPECQHISAEELYKKLIDLGEEIGLATVYRVLNQFDDAGIVTR 70 (150)
T ss_dssp HHHHHHTTCCCCH--HHHHHHHHHTSGGGSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHcCCCCCH--HHHHHHHHHHhCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHCCcEEE
Confidence 3456777875332 3455666666666 677899999999988777777776666788888888765
No 288
>2fu4_A Ferric uptake regulation protein; DNA binding domain, helix-turn-helix, DNA binding protein; 1.80A {Escherichia coli}
Probab=32.01 E-value=1e+02 Score=19.73 Aligned_cols=62 Identities=13% Similarity=0.218 Sum_probs=33.5
Q ss_pred HHHhcCCCCChHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHH
Q 021583 148 KIFLDHLEGTPRIFFDKMISIYYNRG-MHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLD 211 (310)
Q Consensus 148 ~m~~~~~~~~~~~~y~~li~~~~~~g-~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~ 211 (310)
.|.+.|++ .+ ..--.++..+...+ ..-.+.++++.+.+.+...+..|..-.++.+...|-+.
T Consensus 7 ~l~~~g~~-~t-~~r~~IL~~l~~~~~~~~s~~el~~~l~~~~~~is~~TVyR~L~~L~~~Glv~ 69 (83)
T 2fu4_A 7 ALKKAGLK-VT-LPRLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLNQFDDAGIVT 69 (83)
T ss_dssp HHHHTTCC-CC-HHHHHHHHHHTSGGGSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTSEE
T ss_pred HHHHcCCC-cC-HHHHHHHHHHHhCCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCCeE
Confidence 34555553 22 22344555554443 45556667777766655556666556666666666553
No 289
>3ygs_P Procaspase 9; apoptosis, caspase activation, caspase recruitment, recognition complex; 2.50A {Homo sapiens} SCOP: a.77.1.3
Probab=31.95 E-value=79 Score=21.45 Aligned_cols=36 Identities=19% Similarity=0.109 Sum_probs=19.9
Q ss_pred CHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHH
Q 021583 138 RLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKM 178 (310)
Q Consensus 138 ~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a 178 (310)
..++|.++++.+..+|- ..|..++.++...|+..-|
T Consensus 52 ~~~~ar~Lld~L~~rG~-----~Af~~F~~aL~et~~~~La 87 (97)
T 3ygs_P 52 RRDQARQLIIDLETRGS-----QALPLFISCLEDTGQDMLA 87 (97)
T ss_dssp HHHHHHHHHHHHTTSCT-----THHHHHHHHHHTTTCHHHH
T ss_pred hHHHHHHHHHHHHHcCh-----HHHHHHHHHHHHcCcHHHH
Confidence 45566666666666553 2566666666554554444
No 290
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=31.69 E-value=2.7e+02 Score=24.63 Aligned_cols=96 Identities=9% Similarity=0.093 Sum_probs=70.3
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHH--HCCCCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhc--CCCCChH---H
Q 021583 91 VKKALKTLENEKDWKRIIQVTKWML--SKGQGRT---MGTYFLLLNALAEDGRLDEAEELWTKIFLD--HLEGTPR---I 160 (310)
Q Consensus 91 ~~~li~~~~~~~~~~~a~~~~~~m~--~~g~~p~---~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~--~~~~~~~---~ 160 (310)
...|...|...|++.+|.++++.+. -.|.... +..|-..+..|...+++.+|..++.+.... ...+++. .
T Consensus 140 ~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~ 219 (445)
T 4b4t_P 140 TKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLE 219 (445)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHH
Confidence 3567788889999999999999976 2333222 466777899999999999999999886532 1112332 2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHH
Q 021583 161 FFDKMISIYYNRGMHEKMFEIFADME 186 (310)
Q Consensus 161 ~y~~li~~~~~~g~~~~a~~l~~~m~ 186 (310)
-|..++.-+...+++.+|-+.|.+.-
T Consensus 220 ~~~~~~~~~~~e~~y~~a~~~y~e~~ 245 (445)
T 4b4t_P 220 YYNLLVKISLHKREYLEVAQYLQEIY 245 (445)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 56777777788889988888777664
No 291
>3ygs_P Procaspase 9; apoptosis, caspase activation, caspase recruitment, recognition complex; 2.50A {Homo sapiens} SCOP: a.77.1.3
Probab=31.54 E-value=1.1e+02 Score=20.76 Aligned_cols=66 Identities=12% Similarity=0.196 Sum_probs=46.1
Q ss_pred HHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHH
Q 021583 144 ELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKYEKL 216 (310)
Q Consensus 144 ~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a~~l 216 (310)
.+++.+.+.++ .+..-...+-. .......+.|.+++..+..+|- ..|..++.++...|+..-|..+
T Consensus 25 ~vld~L~~~~v--lt~~~~e~I~~-~~~~t~~~~ar~Lld~L~~rG~----~Af~~F~~aL~et~~~~La~lL 90 (97)
T 3ygs_P 25 QLWDVLLSREL--FRPHMIEDIQR-AGSGSRRDQARQLIIDLETRGS----QALPLFISCLEDTGQDMLASFL 90 (97)
T ss_dssp TTHHHHHHTTS--SCHHHHHHHHT-STTCCHHHHHHHHHHHHTTSCT----THHHHHHHHHHTTTCHHHHHHH
T ss_pred HHHHHHHHcCC--CCHHHHHHHHh-ccCCChHHHHHHHHHHHHHcCh----HHHHHHHHHHHHcCcHHHHHHH
Confidence 47888888887 44443443332 1112578999999999988663 4588999999887888777555
No 292
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=30.76 E-value=1.3e+02 Score=20.67 Aligned_cols=57 Identities=9% Similarity=-0.000 Sum_probs=37.9
Q ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHH----HHCCCCCCHHHHHHH
Q 021583 72 VYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWM----LSKGQGRTMGTYFLL 129 (310)
Q Consensus 72 ~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m----~~~g~~p~~~ty~~l 129 (310)
+.++.++....|+.|+......++..|...+- +.-.-+-+|| ...|..|+..+.+.+
T Consensus 28 ae~L~eEfdefGi~~~d~VldKc~ELC~~y~l-da~e~VeeWmAFsts~~g~~pT~enL~~F 88 (101)
T 2keb_A 28 AQQLAEELQIFGLDCEEALIEKLVELCVQYGQ-NEEGMVGELIAFCTSTHKVGLTSEILNSF 88 (101)
T ss_dssp HHHHHHHHHHHTCBCCHHHHHHHHHHHHHHTC-CHHHHHHHHHHHHHHHTCSBCCHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHhcCCCCCCHHHHHHH
Confidence 35666777888999998888999888877764 3222233333 255777877666544
No 293
>4ets_A Ferric uptake regulation protein; metal binding protein, transcription factor; 2.10A {Campylobacter jejuni subsp}
Probab=30.58 E-value=1.1e+02 Score=23.02 Aligned_cols=71 Identities=13% Similarity=0.148 Sum_probs=50.0
Q ss_pred HHHHHHH-HHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHhcCCHHH
Q 021583 140 DEAEELW-TKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEEL--GVRPNVSIVSMMGNAFQKLGMLDK 212 (310)
Q Consensus 140 ~~A~~~~-~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~--g~~p~~~ty~~li~~~~~~g~~~~ 212 (310)
+++++-+ +.+++.|++.. .---.++..+...+.+-.|.++++.+.+. +-..+..|.---++.+...|-+.+
T Consensus 14 ~~~~~~~~~~L~~~g~r~T--~qR~~IL~~L~~~~~h~sA~eI~~~l~~~~~~~~is~aTVYRtL~~L~e~Glv~~ 87 (162)
T 4ets_A 14 DVLLERFKKILRQGGLKYT--KQREVLLKTLYHSDTHYTPESLYMEIKQAEPDLNVGIATVYRTLNLLEEAEMVTS 87 (162)
T ss_dssp HHHHHHHHHHHHHHTCCCC--HHHHHHHHHHHSCCSCBCHHHHHHHHHHHCGGGCCCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHHcCCCCC--HHHHHHHHHHHhCCCCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHCCCEEE
Confidence 4444444 35667787533 34566777777778888999999999987 766777665555677888887755
No 294
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=30.45 E-value=1.8e+02 Score=22.26 Aligned_cols=121 Identities=4% Similarity=-0.126 Sum_probs=69.4
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHH--HHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC--ChHHHHHHHHHHH
Q 021583 94 ALKTLENEKDWKRIIQVTKWMLSKGQGRTMGT--YFLLLNALAEDGRLDEAEELWTKIFLDHLEG--TPRIFFDKMISIY 169 (310)
Q Consensus 94 li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~t--y~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~--~~~~~y~~li~~~ 169 (310)
.+...++.|+.+.+..+++.+.+.|..++... -.+.+...+..|+.+- ++.+.+.|..+ .+...++ .+...
T Consensus 12 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~----v~~Ll~~g~~~~~~~~~g~t-~l~~A 86 (241)
T 1k1a_A 12 PLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSV----VRLLVTAGASPMALDRHGQT-AAHLA 86 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHH----HHHHHHTTCCTTCCCTTSCC-HHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHH----HHHHHHcCCCccccCCCCCC-HHHHH
Confidence 45566778899888888888777777665432 2345666667777754 44444555431 1112233 34444
Q ss_pred HHcCCHHHHHHHHHHHHHCCCCCCH--HHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 170 YNRGMHEKMFEIFADMEELGVRPNV--SIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 170 ~~~g~~~~a~~l~~~m~~~g~~p~~--~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
+..|+.+-+..+++.....++.++. ..-.+.+...+..|..+-+..+++.
T Consensus 87 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 138 (241)
T 1k1a_A 87 CEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLER 138 (241)
T ss_dssp HHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 6678777666665553332233332 1222344555677888877777654
No 295
>1ug3_A EIF4GI, eukaryotic protein synthesis initiation factor 4G; heat repeat, translation; 2.24A {Homo sapiens} SCOP: a.118.1.14 a.118.1.14
Probab=30.36 E-value=45 Score=28.66 Aligned_cols=65 Identities=11% Similarity=0.000 Sum_probs=44.6
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHCCCCC
Q 021583 126 YFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRG-MHEKMFEIFADMEELGVRP 192 (310)
Q Consensus 126 y~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g-~~~~a~~l~~~m~~~g~~p 192 (310)
...++.=|...|++++|...++++...+. .+.+++..+..++=+.. ..+.+.+++..+.+.|+-+
T Consensus 14 ~~~ll~Ey~~~~d~~Ea~~ci~el~~p~~--~~~~v~~~i~~~le~~~~~re~~~~Ll~~L~~~~~is 79 (339)
T 1ug3_A 14 SKAIIEEYLHLNDMKEAVQCVQELASPSL--LFIFVRHGVESTLERSAIAREHMGQLLHQLLCAGHLS 79 (339)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHTTCCGGG--HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHcCCccc--HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHCCCCC
Confidence 46789999999999999999999864433 33445555555554322 2455677788887766554
No 296
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=30.17 E-value=1.6e+02 Score=21.49 Aligned_cols=66 Identities=14% Similarity=0.075 Sum_probs=30.4
Q ss_pred CCHHHHHHHHHHHHhcCCH---HHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 021583 121 RTMGTYFLLLNALAEDGRL---DEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEE 187 (310)
Q Consensus 121 p~~~ty~~ll~~~~~~g~~---~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~ 187 (310)
|+..|-=.+-.++.+..+. .++..+++++.+.+-. ......=-|--|+.+.|++++|.+..+.+.+
T Consensus 38 vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~-~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~ 106 (134)
T 3o48_A 38 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAES-RRRECLYYLTIGCYKLGEYSMAKRYVDTLFE 106 (134)
T ss_dssp SCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGG-GHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT
T ss_pred CChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcc-hhHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 4443333344444444332 3455555555544310 1122344444455556666666666555554
No 297
>4ets_A Ferric uptake regulation protein; metal binding protein, transcription factor; 2.10A {Campylobacter jejuni subsp}
Probab=29.79 E-value=1.7e+02 Score=21.82 Aligned_cols=37 Identities=22% Similarity=0.143 Sum_probs=19.6
Q ss_pred HHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q 021583 115 LSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLD 152 (310)
Q Consensus 115 ~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~ 152 (310)
++.|++++..= ..++..+...++.-.|.++++.+.+.
T Consensus 25 ~~~g~r~T~qR-~~IL~~L~~~~~h~sA~eI~~~l~~~ 61 (162)
T 4ets_A 25 RQGGLKYTKQR-EVLLKTLYHSDTHYTPESLYMEIKQA 61 (162)
T ss_dssp HHHTCCCCHHH-HHHHHHHHSCCSCBCHHHHHHHHHHH
T ss_pred HHcCCCCCHHH-HHHHHHHHhCCCCCCHHHHHHHHHhh
Confidence 35566555432 33444555555555666666666554
No 298
>3eiq_C Programmed cell death protein 4; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Mus musculus}
Probab=29.39 E-value=1.3e+02 Score=26.08 Aligned_cols=109 Identities=16% Similarity=0.146 Sum_probs=70.6
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCC--HHHHHHHHHHHHhcCCCCChHHHHHHHHH
Q 021583 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGR--LDEAEELWTKIFLDHLEGTPRIFFDKMIS 167 (310)
Q Consensus 90 ~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~--~~~A~~~~~~m~~~~~~~~~~~~y~~li~ 167 (310)
..+.+|.-|...++.++|.+.++++..... ....++..+..++-+.++ .+...+++..+...++ ++=+.+..
T Consensus 219 ki~~lL~EY~~s~D~~EA~~ci~EL~~p~f-hhe~V~~av~~aLE~~~~~~re~~~~LL~~L~~~gl-----ls~~q~~~ 292 (358)
T 3eiq_C 219 EIDMLLKEYLLSGDISEAEHCLKELEVPHF-HHELVYEAIVMVLESTGESAFKMILDLLKSLWKSST-----ITIDQMKR 292 (358)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHCCTTC-HHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTC-----SCHHHHHH
T ss_pred HHHHHHHHhccCCCHHHHHHHHHHccCCcc-hHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCC-----CCHHHHHH
Confidence 478999999999999999999999874322 235666777777776544 4568899999999888 34455666
Q ss_pred HHHHcCCHHHHHHHHHHHHHCCCCCCHHHH-HHHHHHHHhcCCHHH
Q 021583 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIV-SMMGNAFQKLGMLDK 212 (310)
Q Consensus 168 ~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty-~~li~~~~~~g~~~~ 212 (310)
||.+ ..+.+.++.-- .|.+..| ..++.-+...|-+..
T Consensus 293 Gf~~------vl~~ldDl~lD--iP~A~~~la~~varai~~g~l~~ 330 (358)
T 3eiq_C 293 GYER------IYNEIPDINLD--VPHSYSVLERFVEECFQAGIISK 330 (358)
T ss_dssp HHHH------HHHHHHHHHHH--CTTHHHHHHHHHHHHHHHTSSCH
T ss_pred HHHH------HHHhccHhhcc--cccHHHHHHHHHHHHHHCCCCCH
Confidence 6554 33344443311 3666444 334444445555444
No 299
>2f6m_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomes, trafficking complex, vacuole protei sorting, ESCRT protein complexes; HET: DDQ; 2.10A {Saccharomyces cerevisiae} SCOP: a.2.17.1 PDB: 2f66_A*
Probab=29.20 E-value=96 Score=19.54 Aligned_cols=44 Identities=20% Similarity=0.107 Sum_probs=24.5
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHH
Q 021583 126 YFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYN 171 (310)
Q Consensus 126 y~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~ 171 (310)
++-+++.++...-++++...+++..+.|. .+..+|---++.+++
T Consensus 5 ~~Qll~l~Aed~AieDaiy~L~~aL~~g~--I~l~~ylK~vR~LaR 48 (65)
T 2f6m_A 5 LNQLYNLVAQDYALTDTIEALSRMLHRGT--IPLDTFVKQGRELAR 48 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTS--SCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CCHHHHHHHHHHHHH
Confidence 44555556655556666666666666665 343445544555444
No 300
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=28.47 E-value=88 Score=22.75 Aligned_cols=62 Identities=8% Similarity=-0.090 Sum_probs=42.9
Q ss_pred HHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHH
Q 021583 149 IFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212 (310)
Q Consensus 149 m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~ 212 (310)
+++.|++ .+.--..++..+...+.+-.|.++++.+.+.+-..+..|.---|+.+...|-+.+
T Consensus 5 ~r~~g~r--~T~qR~~Il~~L~~~~~h~sa~eI~~~l~~~~~~is~aTVYR~L~~L~e~Glv~~ 66 (139)
T 3mwm_A 5 GPPVKGR--ATRQRAAVSAALQEVEEFRSAQELHDMLKHKGDAVGLTTVYRTLQSLADAGEVDV 66 (139)
T ss_dssp -----CH--HHHHHHHHHHHHTTCSSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTSSEE
T ss_pred cCCCCCc--cCHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHCCCEEE
Confidence 3445552 2234566777777777788899999999998877787776666788888888755
No 301
>2zu6_B Programmed cell death protein 4; protein-protein complex, ATP-binding, helicase, hydrolase, initiation factor, nucleotide-binding; 2.80A {Homo sapiens} PDB: 3eij_A
Probab=28.44 E-value=1e+02 Score=25.99 Aligned_cols=108 Identities=14% Similarity=0.117 Sum_probs=67.7
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCC--HHHHHHHHHHHHhcCCCCChHHHHHHHHH
Q 021583 90 TVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGR--LDEAEELWTKIFLDHLEGTPRIFFDKMIS 167 (310)
Q Consensus 90 ~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~--~~~A~~~~~~m~~~~~~~~~~~~y~~li~ 167 (310)
..+.++.-|...|+.++|.+.++++..... ....++..+..++-+.++ .+.+.+++..+.+.++- +=+.+..
T Consensus 168 ki~~lL~EY~~~~D~~EA~~ci~EL~~p~f-~~e~V~~ai~~alE~~~~~~re~~~~LL~~L~~~~~l-----s~~q~~~ 241 (307)
T 2zu6_B 168 EIDMLLKEYLLSGDISEAEHCLKELEVPHF-HHELVYEAIIMVLESTGESTFKMILDLLKSLWKSSTI-----TVDQMKR 241 (307)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHCCGGG-HHHHHHHHHHHHHTCCSSHHHHHHHHHHHHHHHHCSS-----CHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHcCCCcc-hHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHCCCC-----CHHHHHH
Confidence 467889999999999999999999874322 234666677777777544 45678999999988882 3444555
Q ss_pred HHHHcCCHHHHHHHHHHHHHCCCCCCHHHH-HHHHHHHHhcCCHH
Q 021583 168 IYYNRGMHEKMFEIFADMEELGVRPNVSIV-SMMGNAFQKLGMLD 211 (310)
Q Consensus 168 ~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty-~~li~~~~~~g~~~ 211 (310)
||.+ ..+.+.++.-. .|+...| ..++.-+...|-+.
T Consensus 242 Gf~~------vl~~l~Dl~lD--iP~A~~~la~~v~~ai~~g~l~ 278 (307)
T 2zu6_B 242 GYER------IYNEIPDINLD--VPHSYSVLERFVEECFQAGIIS 278 (307)
T ss_dssp HHHH------HHHHHHHHHHH--CTTHHHHHHHHHHHHHHHTSSC
T ss_pred HHHH------HHHhccHhhcc--cccHHHHHHHHHHHHHHCCCCC
Confidence 5443 33333333211 3665443 33444444455444
No 302
>2p1h_A APAF-1, apoptotic protease-activating factor 1; folding, unfolding, apoptosis; 1.59A {Homo sapiens} SCOP: a.77.1.3 PDB: 1cww_A 1c15_A 1cy5_A 3ygs_C 2ygs_A
Probab=28.07 E-value=1.3e+02 Score=19.90 Aligned_cols=61 Identities=10% Similarity=-0.024 Sum_probs=29.0
Q ss_pred HHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHH
Q 021583 144 ELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKY 213 (310)
Q Consensus 144 ~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a 213 (310)
.+++.+.+.++ .+..-+..+-.. ....++|.++++.+..+ +...|..++.++...+...-|
T Consensus 26 ~lld~L~~~~v--lt~~~~e~I~~~---~t~~~kar~Lld~l~~k----G~~af~~F~~aL~~~~~~~La 86 (94)
T 2p1h_A 26 YIMDHMISDGF--LTISEEEKVRNE---PTQQQRAAMLIKMILKK----DNDSYVSFYNALLHEGYKDLA 86 (94)
T ss_dssp HHHHHHHHHTS--SCHHHHHHHHTS---SSHHHHHHHHHHHHTTS----CHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHCCC--CCHHHHHHHHcC---CChHHHHHHHHHHHHHc----CHHHHHHHHHHHHHcCHHHHH
Confidence 45555555555 333333333322 44555566666555432 234455555555555544433
No 303
>2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, GE regulation; 2.70A {Mycobacterium tuberculosis}
Probab=27.59 E-value=1e+02 Score=21.97 Aligned_cols=51 Identities=10% Similarity=0.123 Sum_probs=40.2
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHH
Q 021583 162 FDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDK 212 (310)
Q Consensus 162 y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~ 212 (310)
--.++..+...+.+-.|.++++.+.+.+-..+..|.---++.+...|-+.+
T Consensus 13 R~~Il~~l~~~~~~~sa~ei~~~l~~~~~~is~~TVYR~L~~L~e~Glv~~ 63 (131)
T 2o03_A 13 RAAISTLLETLDDFRSAQELHDELRRRGENIGLTTVYRTLQSMASSGLVDT 63 (131)
T ss_dssp HHHHHHHHHHCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTTSEEE
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCCEEE
Confidence 445677777777888899999999998777777776667788888888765
No 304
>2of5_H Leucine-rich repeat and death domain-containing protein; death domain complex, apoptosis; 3.20A {Homo sapiens}
Probab=27.45 E-value=1.4e+02 Score=21.07 Aligned_cols=50 Identities=14% Similarity=0.207 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHhCCCCccch
Q 021583 176 EKMFEIFADMEELGVRPN-VSIVSMMGNAFQKLGMLDKYEKLKKKYPPPKWEY 227 (310)
Q Consensus 176 ~~a~~l~~~m~~~g~~p~-~~ty~~li~~~~~~g~~~~a~~l~~~~~p~~~~~ 227 (310)
+.+.+++....+. .+. ..|...|+.++.+.|+-+-|.++-..+.+....|
T Consensus 54 eq~~~mL~~W~~~--~g~~~Atv~~L~~aL~~~~r~diae~l~~~ie~~~~~y 104 (118)
T 2of5_H 54 EQIRHMLFSWAER--QAGQPGAVGLLVQALEQSDRQDVAEEVRAVLELGRRKY 104 (118)
T ss_dssp HHHHHHHHHHHHT--TSSCSSHHHHHHHHHHHTTCHHHHHHHHHHTCCC----
T ss_pred HHHHHHHHHHHhc--cCCCCcHHHHHHHHHHHcCcHHHHHHHHHHHhhhhHHH
Confidence 4445555444433 111 3455666666666666666665555444443333
No 305
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=27.27 E-value=67 Score=23.00 Aligned_cols=113 Identities=12% Similarity=-0.054 Sum_probs=51.1
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC--CChHHHHHHHHHHHH
Q 021583 94 ALKTLENEKDWKRIIQVTKWMLSKG-QGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLE--GTPRIFFDKMISIYY 170 (310)
Q Consensus 94 li~~~~~~~~~~~a~~~~~~m~~~g-~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~--~~~~~~y~~li~~~~ 170 (310)
.+...++.|+.+.+..+++. .... -..|..-. +.+.. +..|+.+-+..++ +.|.. ..+...++.|.. .+
T Consensus 5 ~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~-t~L~~-~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~-A~ 76 (156)
T 1bd8_A 5 RLSGAAARGDVQEVRRLLHR-ELVHPDALNRFGK-TALQV-MMFGSTAIALELL----KQGASPNVQDTSGTSPVHD-AA 76 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHHT-TCCCTTCCCTTSC-CHHHH-SCTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHH-HH
T ss_pred HHHHHHHhCCHHHHHHHHHh-hCcCccccCCCCC-cHHHH-HHcCCHHHHHHHH----HCCCCCCCcCCCCCCHHHH-HH
Confidence 34445666777777777665 2001 11222222 23333 6667665444443 33432 111122333333 34
Q ss_pred HcCCHHHHHHHHHHHHHCCCCCCH---HHHHHHHHHHHhcCCHHHHHHHHHh
Q 021583 171 NRGMHEKMFEIFADMEELGVRPNV---SIVSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 171 ~~g~~~~a~~l~~~m~~~g~~p~~---~ty~~li~~~~~~g~~~~a~~l~~~ 219 (310)
..|+.+-+.-+ .+.|..++. .-. +.+...+..|+.+-+..+++.
T Consensus 77 ~~~~~~~v~~L----l~~g~~~~~~~~~g~-t~L~~A~~~~~~~~v~~Ll~~ 123 (156)
T 1bd8_A 77 RTGFLDTLKVL----VEHGADVNVPDGTGA-LPIHLAVQEGHTAVVSFLAAE 123 (156)
T ss_dssp HTTCHHHHHHH----HHTTCCSCCCCTTSC-CHHHHHHHHTCHHHHHHHHTT
T ss_pred HcCcHHHHHHH----HHcCCCCCCcCCCCC-cHHHHHHHhChHHHHHHHHhc
Confidence 55666544333 344544432 122 233334566777776666544
No 306
>2yru_A Steroid receptor RNA activator 1; SRAP, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=26.66 E-value=1.2e+02 Score=21.63 Aligned_cols=41 Identities=10% Similarity=0.176 Sum_probs=19.1
Q ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 021583 75 ALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWML 115 (310)
Q Consensus 75 ~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~ 115 (310)
+|+.|....+.|++..--.-|......++++.|..+.-.+.
T Consensus 48 LfdkLn~~~Ls~~v~~~L~~l~~al~~~dy~~A~~ih~~l~ 88 (118)
T 2yru_A 48 LREQWAGGKLSIPVKKRMALLVQELLHHQWDAADDIHRSLM 88 (118)
T ss_dssp HHHHHHHTCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34444444544444333333344444555555555555443
No 307
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=25.94 E-value=3e+02 Score=23.22 Aligned_cols=16 Identities=6% Similarity=0.005 Sum_probs=9.3
Q ss_pred HHhcCCHHHHHHHHHh
Q 021583 204 FQKLGMLDKYEKLKKK 219 (310)
Q Consensus 204 ~~~~g~~~~a~~l~~~ 219 (310)
|...|++..|..+|+.
T Consensus 198 yL~l~n~~~A~~~~~~ 213 (312)
T 2wpv_A 198 YLFISNISFAHESKDI 213 (312)
T ss_dssp HHHTTBHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHH
Confidence 4455666666666554
No 308
>1fad_A Protein (FADD protein); apoptosis, death domain; NMR {Mus musculus} SCOP: a.77.1.2
Probab=22.98 E-value=93 Score=21.03 Aligned_cols=24 Identities=17% Similarity=-0.136 Sum_probs=13.9
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHH
Q 021583 125 TYFLLLNALAEDGRLDEAEELWTK 148 (310)
Q Consensus 125 ty~~ll~~~~~~g~~~~A~~~~~~ 148 (310)
|...|+.++.+.|.-+-|..+-+.
T Consensus 73 t~~~L~~AL~~~~~~~iae~i~~~ 96 (99)
T 1fad_A 73 SVAGLVKALRTCRLNLVADLVEEA 96 (99)
T ss_dssp SHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHCCcHHHHHHHHHH
Confidence 456666666666666555555443
No 309
>2yru_A Steroid receptor RNA activator 1; SRAP, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=22.66 E-value=2.1e+02 Score=20.29 Aligned_cols=46 Identities=13% Similarity=0.142 Sum_probs=32.2
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC
Q 021583 108 IQVTKWMLSKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDH 153 (310)
Q Consensus 108 ~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~ 153 (310)
.-+|+.+.+..+.|++...-.-|-.+...++++.|.++.-.+....
T Consensus 46 ~~LfdkLn~~~Ls~~v~~~L~~l~~al~~~dy~~A~~ih~~l~t~~ 91 (118)
T 2yru_A 46 ALLREQWAGGKLSIPVKKRMALLVQELLHHQWDAADDIHRSLMVDH 91 (118)
T ss_dssp HHHHHHHHHTCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHST
T ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCc
Confidence 3455556666676665555555666678899999999998888753
No 310
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=22.58 E-value=2.1e+02 Score=20.18 Aligned_cols=115 Identities=21% Similarity=0.175 Sum_probs=61.4
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCH---HHHHHHHHHH
Q 021583 128 LLLNALAEDGRLDEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNV---SIVSMMGNAF 204 (310)
Q Consensus 128 ~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~---~ty~~li~~~ 204 (310)
+.+...++.|+.+.+..+++. ........+...++.|. . +..|+.+-+..++ +.|..++. .-. +.+...
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~-~-~~~~~~~~v~~Ll----~~g~~~~~~~~~g~-t~L~~A 75 (156)
T 1bd8_A 4 DRLSGAAARGDVQEVRRLLHR-ELVHPDALNRFGKTALQ-V-MMFGSTAIALELL----KQGASPNVQDTSGT-SPVHDA 75 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHT-TCCCTTCCCTTSCCHHH-H-SCTTCHHHHHHHH----HTTCCTTCCCTTSC-CHHHHH
T ss_pred hHHHHHHHhCCHHHHHHHHHh-hCcCccccCCCCCcHHH-H-HHcCCHHHHHHHH----HCCCCCCCcCCCCC-CHHHHH
Confidence 456667788999998888877 31122222323344443 3 6677766554444 45655443 222 334445
Q ss_pred HhcCCHHHHHHHHHhC-CCCccchheeccCcccCChhhhhHhhhc-cCCChhhHHhhhch
Q 021583 205 QKLGMLDKYEKLKKKY-PPPKWEYRYIKGKRVRIPAKPKYELDSA-TEGKTNEVETTKNP 262 (310)
Q Consensus 205 ~~~g~~~~a~~l~~~~-~p~~~~~~~~~~~~~~~~~~~~~~li~~-~~g~~~~a~~~~~~ 262 (310)
+..|+.+-+..+++.- .++ ..+....+.|..+ ..|+.+-++-+++.
T Consensus 76 ~~~~~~~~v~~Ll~~g~~~~------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 123 (156)
T 1bd8_A 76 ARTGFLDTLKVLVEHGADVN------------VPDGTGALPIHLAVQEGHTAVVSFLAAE 123 (156)
T ss_dssp HHTTCHHHHHHHHHTTCCSC------------CCCTTSCCHHHHHHHHTCHHHHHHHHTT
T ss_pred HHcCcHHHHHHHHHcCCCCC------------CcCCCCCcHHHHHHHhChHHHHHHHHhc
Confidence 5678888877776541 111 1122233444445 56666666555544
No 311
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=22.47 E-value=2.4e+02 Score=20.86 Aligned_cols=67 Identities=13% Similarity=0.068 Sum_probs=34.0
Q ss_pred CCCHHHHHHHHHHHHhcCCH---HHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 021583 120 GRTMGTYFLLLNALAEDGRL---DEAEELWTKIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEE 187 (310)
Q Consensus 120 ~p~~~ty~~ll~~~~~~g~~---~~A~~~~~~m~~~~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~ 187 (310)
.|+..+-=.+-.++.+.... .++..+++++.+.+-. ......=-|--||.+.|++++|.+..+.+.+
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~-~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~ 105 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAES-RRRECLYYLTIGCYKLGEYSMAKRYVDTLFE 105 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCS-THHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcc-chhHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 34444444444555555443 3455666665554321 1222333344456666666666666666665
No 312
>1wty_A Hypothetical protein TTHA0048; structural genomics, riken structural genomics/proteomics in RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: a.24.16.2 PDB: 2ywa_A
Probab=22.44 E-value=2e+02 Score=20.06 Aligned_cols=73 Identities=14% Similarity=0.124 Sum_probs=44.2
Q ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH-HCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 021583 73 YGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTKWML-SKGQGRTMGTYFLLLNALAEDGRLDEAEELWTKIFL 151 (310)
Q Consensus 73 ~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~~m~-~~g~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~ 151 (310)
..-+++..+. .+|......++..+-.+ ++.+.++..... ..|+ +..++.-.+....+.|-+++. +.|..|..
T Consensus 8 l~~L~e~~~~--~~~~~~~dg~i~~fe~t--~Elawk~~k~~l~~~g~--~~~s~rd~~r~a~~~glI~~~-~~w~~m~~ 80 (119)
T 1wty_A 8 VERLKAALER--PKDEFIRDSAIQRFEFT--FELAWKTLKTFLELQGL--EARSPRAAIRGAFQVGLLPED-PFWLEMLE 80 (119)
T ss_dssp HHHHHHHHSS--CCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHTC--CCSSHHHHHHHHHHHTSSCCC-HHHHHHHH
T ss_pred HHHHHHHHhc--CCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHcCC--CCCCHHHHHHHHHHcCCCCcH-HHHHHHHH
Confidence 4444444333 45666666666666543 455555555544 3566 467778888888888887666 55655554
Q ss_pred c
Q 021583 152 D 152 (310)
Q Consensus 152 ~ 152 (310)
.
T Consensus 81 ~ 81 (119)
T 1wty_A 81 L 81 (119)
T ss_dssp H
T ss_pred H
Confidence 3
No 313
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=22.21 E-value=76 Score=24.63 Aligned_cols=144 Identities=10% Similarity=-0.068 Sum_probs=77.9
Q ss_pred CcHHHHHHHHHHHHHcCCCCCHHH--HHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHH--HHHHHHHHHhcCCHHHH
Q 021583 67 NVKEEVYGALDSFIAWELEFPLIT--VKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGT--YFLLLNALAEDGRLDEA 142 (310)
Q Consensus 67 ~~~~~~~~~~~~m~~~~~~p~~~~--~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~t--y~~ll~~~~~~g~~~~A 142 (310)
+..+.+..+++.+.+.|..++... -.+.+...+..|+.+ +++.+.+.|..++... -.+.+...+..|+.+-+
T Consensus 20 g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~ 95 (241)
T 1k1a_A 20 GNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPS----VVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCL 95 (241)
T ss_dssp TCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHH----HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHH----HHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHH
Confidence 445555555555555666655321 223455556677765 4445556776655322 23456666778888777
Q ss_pred HHHHHHHHhcCCC--CChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHH---HHHHHHHHHHhcCCHHHHHHHH
Q 021583 143 EELWTKIFLDHLE--GTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVS---IVSMMGNAFQKLGMLDKYEKLK 217 (310)
Q Consensus 143 ~~~~~~m~~~~~~--~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~---ty~~li~~~~~~g~~~~a~~l~ 217 (310)
..+++.....+.. ..+...++.|.. .+..|+.+- ++.+.+.|..++.. .-.+.+...+..|+.+-+..++
T Consensus 96 ~~Ll~~~~~~~~~~~~~~~~g~t~L~~-A~~~~~~~~----~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 170 (241)
T 1k1a_A 96 RALLDSAAPGTLDLEARNYDGLTALHV-AVNTECQET----VQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLL 170 (241)
T ss_dssp HHHHHHSCTTSCCTTCCCTTSCCHHHH-HHHHTCHHH----HHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHcCCCccccccccCcCCCcHHHH-HHHcCCHHH----HHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHH
Confidence 6666654422111 122223344443 455666544 44455566665532 2334555566788988877776
Q ss_pred Hh
Q 021583 218 KK 219 (310)
Q Consensus 218 ~~ 219 (310)
+.
T Consensus 171 ~~ 172 (241)
T 1k1a_A 171 QH 172 (241)
T ss_dssp HT
T ss_pred Hc
Confidence 54
No 314
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=21.91 E-value=2.6e+02 Score=21.18 Aligned_cols=88 Identities=9% Similarity=0.104 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHC-C-CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCChH-HHHHHHH
Q 021583 90 TVKKALKTLENEKDWKRIIQVTKWMLSK-G-QGRTMGTYFLLLNALAEDGRLDEAEELWTKIFLDHLEGTPR-IFFDKMI 166 (310)
Q Consensus 90 ~~~~li~~~~~~~~~~~a~~~~~~m~~~-g-~~p~~~ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~~~~-~~y~~li 166 (310)
++..+-.++...+++.+|...|+..... . +.-+..+++.+ ........ .... ..+. +=|- +-
T Consensus 65 ~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~----~~~ss~p~---------s~~~-~~e~Elkyk-ia 129 (167)
T 3ffl_A 65 LLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPST----GNSASTPQ---------SQCL-PSEIEVKYK-LA 129 (167)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC---------------------------------CC-CCHHHHHHH-HH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccc----cccCCCcc---------cccc-cchHHHHHH-HH
Confidence 5667788889999999999999995422 2 22122222211 00000000 0111 1222 2344 77
Q ss_pred HHHHHcCCHHHHHHHHHHHHHCCCCC
Q 021583 167 SIYYNRGMHEKMFEIFADMEELGVRP 192 (310)
Q Consensus 167 ~~~~~~g~~~~a~~l~~~m~~~g~~p 192 (310)
.+|.+.+++++|+.+++....+...|
T Consensus 130 ~C~~~l~~~~~Ai~~Le~Ip~k~Rt~ 155 (167)
T 3ffl_A 130 ECYTVLKQDKDAIAILDGIPSRQRTP 155 (167)
T ss_dssp HHHHHTTCHHHHHHHHHTSCGGGCCH
T ss_pred HHHHHHCCHHHHHHHHhcCCchhcCH
Confidence 88899999999999988765443333
No 315
>2rg8_A Programmed cell death protein 4; MA3 domain, heat repeats, anti-oncogene, apoptosis, cell cycle, cytoplasm, nucleus, phosphorylation, polymorphism; 1.80A {Homo sapiens} PDB: 2kzt_A
Probab=21.89 E-value=1.5e+02 Score=22.35 Aligned_cols=25 Identities=4% Similarity=0.069 Sum_probs=14.3
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHH
Q 021583 91 VKKALKTLENEKDWKRIIQVTKWML 115 (310)
Q Consensus 91 ~~~li~~~~~~~~~~~a~~~~~~m~ 115 (310)
...+|.-|...++.++|..-++++.
T Consensus 13 ~~~ii~EYf~~~D~~Ea~~~l~eL~ 37 (165)
T 2rg8_A 13 LTPIIQEYFEHGDTNEVAEMLRDLN 37 (165)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHhC
Confidence 3455556655666666666665544
No 316
>3l6a_A Eukaryotic translation initiation factor 4 gamma; C-terminal region, MA2 domain, W2 domain, EIF4G2, EIF family translation; HET: MES PG4; 2.00A {Homo sapiens}
Probab=21.47 E-value=1.7e+02 Score=25.36 Aligned_cols=66 Identities=8% Similarity=0.003 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCC-HHHHHHHHHHHHhcCC
Q 021583 89 ITVKKALKTLENEKDWKRIIQVTKWMLSKGQGRTMGTYFLLLNALAEDGR-LDEAEELWTKIFLDHL 154 (310)
Q Consensus 89 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~ty~~ll~~~~~~g~-~~~A~~~~~~m~~~~~ 154 (310)
-....+|.-|...|+.++|.+-++++.....-...+.+..+..++-+... -+.+-.++..+...++
T Consensus 13 k~~~~ii~EY~~~~D~~Ea~~~l~eL~~p~~~~~~~v~~~i~~aLer~~~~re~~~~LL~~L~~~~~ 79 (364)
T 3l6a_A 13 KLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKASSLISLLKQEGI 79 (364)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHTCCGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHhCCchhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHCCC
Confidence 35678899999999999999999887532111113444555555544322 2446677777777666
No 317
>3f3f_C Nucleoporin NUP85; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_C 3f3p_C 3ewe_B
Probab=21.22 E-value=2.1e+02 Score=26.52 Aligned_cols=72 Identities=13% Similarity=0.129 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHHHhc-CCCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCCHHHH
Q 021583 138 RLDEAEELWTKIFLD-HLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKLGMLDKY 213 (310)
Q Consensus 138 ~~~~A~~~~~~m~~~-~~~~~~~~~y~~li~~~~~~g~~~~a~~l~~~m~~~g~~p~~~ty~~li~~~~~~g~~~~a 213 (310)
+.........++..+ .+ .+..--.-++..|.+.|..+.|.++++.|-.+-+. +...| .-+..|+|+|+++.+
T Consensus 496 ~~~~gr~~IselLpr~Pl--~Tndd~e~vL~iCa~l~L~~~ar~I~k~~g~k~l~-~g~~g-eAL~~f~rA~~~~~V 568 (570)
T 3f3f_C 496 TRSAKKMVIAELLPHYPF--VTNDDIEWMLSICVEWRLPEIAKEIYTTLGNQMLS-AHNII-ESIANFSRAGKYELV 568 (570)
T ss_dssp CHHHHHHHHHHHGGGCCC--CSHHHHHHHHHHHHHHTCHHHHHHHHHHHHC--------------------------
T ss_pred chhHHHHHHHHHhccCCC--CCHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHH-CccHH-HHHHHHHHcCChhhc
Confidence 334444455444433 22 22234556666777777777777777666543322 33344 445556777766654
No 318
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=20.94 E-value=2.4e+02 Score=22.60 Aligned_cols=49 Identities=8% Similarity=0.028 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHCCCCCCH--HHHH-----HHHHHHHhcCCHHHHHHHHHHHHhc
Q 021583 104 WKRIIQVTKWMLSKGQGRTM--GTYF-----LLLNALAEDGRLDEAEELWTKIFLD 152 (310)
Q Consensus 104 ~~~a~~~~~~m~~~g~~p~~--~ty~-----~ll~~~~~~g~~~~A~~~~~~m~~~ 152 (310)
++.|+.+|+.+...--.++. .... ..+-.|.++|.+++|.++|++....
T Consensus 88 LESAl~v~~~I~~e~~l~~~l~e~i~~llk~qAV~VCiek~~f~kA~eiLkr~~~~ 143 (235)
T 3bu8_A 88 LESAINVLEMIKTEFTLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMSK 143 (235)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhcC
Confidence 46688888888754322221 1222 3345678889999999998887765
No 319
>2hpi_A DNA polymerase III alpha subunit; POL-beta-like nucleotidyltransferase fold, transferase; HET: DNA; 3.00A {Thermus aquaticus} PDB: 2hpm_A* 3e0d_A*
Probab=20.48 E-value=5.6e+02 Score=26.29 Aligned_cols=64 Identities=22% Similarity=0.232 Sum_probs=37.8
Q ss_pred HHHHHHHHHhcCCH-HHHHHHHHHHHhcCCCCCh----------------------HHHHHHHHHHHHHcCCHHHHHHHH
Q 021583 126 YFLLLNALAEDGRL-DEAEELWTKIFLDHLEGTP----------------------RIFFDKMISIYYNRGMHEKMFEIF 182 (310)
Q Consensus 126 y~~ll~~~~~~g~~-~~A~~~~~~m~~~~~~~~~----------------------~~~y~~li~~~~~~g~~~~a~~l~ 182 (310)
...++.++.++|-. +.|.++|+.|....-...| ..-|.++++.. .|+.++...++
T Consensus 781 r~~F~~g~~~~G~~~~~a~~ifd~i~~Fa~YgFnKSHAaAYa~laYqtAyLK~hyP~eF~aAlLt~~--~~~~~k~~~~i 858 (1220)
T 2hpi_A 781 RERFVRGAKERGVPEEEANRLFDMLEAFANYGFNKSHAAAYSLLSYQTAYVKAHYPVEFMAALLSVE--RHDSDKVAEYI 858 (1220)
T ss_dssp HHHHHHHHHHHSCCSHHHHHHHHHHHHHTTSCBCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHT--TTCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHHhCHHHHHHHHhHhh--cCCchHHHHHH
Confidence 34567777777654 4577788887655322222 22233344333 56777777777
Q ss_pred HHHHHCCCC
Q 021583 183 ADMEELGVR 191 (310)
Q Consensus 183 ~~m~~~g~~ 191 (310)
+++++.|++
T Consensus 859 ~ear~~Gi~ 867 (1220)
T 2hpi_A 859 RDARALGIP 867 (1220)
T ss_dssp HHHHTTTCC
T ss_pred HHHHHCCCe
Confidence 888777755
No 320
>2of5_H Leucine-rich repeat and death domain-containing protein; death domain complex, apoptosis; 3.20A {Homo sapiens}
Probab=20.42 E-value=1.9e+02 Score=20.33 Aligned_cols=43 Identities=16% Similarity=0.077 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHH
Q 021583 69 KEEVYGALDSFIAWELEFPLITVKKALKTLENEKDWKRIIQVTK 112 (310)
Q Consensus 69 ~~~~~~~~~~m~~~~~~p~~~~~~~li~~~~~~~~~~~a~~~~~ 112 (310)
.+.++++|..|.+..-. ...|...|+.++.+.|+-+-|.++-.
T Consensus 53 ~eq~~~mL~~W~~~~g~-~~Atv~~L~~aL~~~~r~diae~l~~ 95 (118)
T 2of5_H 53 DEQIRHMLFSWAERQAG-QPGAVGLLVQALEQSDRQDVAEEVRA 95 (118)
T ss_dssp HHHHHHHHHHHHHTTSS-CSSHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCC-CCcHHHHHHHHHHHcCcHHHHHHHHH
Confidence 45566666666654211 12455666666666666665555443
No 321
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=20.38 E-value=2.6e+02 Score=21.88 Aligned_cols=115 Identities=12% Similarity=-0.013 Sum_probs=61.0
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHH---HHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC--ChHHHHHHHH
Q 021583 92 KKALKTLENEKDWKRIIQVTKWMLSKGQGRTMG---TYFLLLNALAEDGRLDEAEELWTKIFLDHLEG--TPRIFFDKMI 166 (310)
Q Consensus 92 ~~li~~~~~~~~~~~a~~~~~~m~~~g~~p~~~---ty~~ll~~~~~~g~~~~A~~~~~~m~~~~~~~--~~~~~y~~li 166 (310)
++.+...++.|+++.+..++ +.|..++.. .-.+.+...+..|+.+-+.. +.+.|..+ .+...++.|
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll----~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~----Ll~~g~~~~~~~~~g~t~L- 76 (285)
T 1wdy_A 6 NHLLIKAVQNEDVDLVQQLL----EGGANVNFQEEEGGWTPLHNAVQMSREDIVEL----LLRHGADPVLRKKNGATPF- 76 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHH----HHHTTCCTTCCCTTCCCHH-
T ss_pred chHHHHHHHcCCHHHHHHHH----HcCCCcccccCCCCCcHHHHHHHcCCHHHHHH----HHHcCCCCcccCCCCCCHH-
Confidence 34566667788876555444 455544322 12345666677788754444 44445421 111123333
Q ss_pred HHHHHcCCHHHHHHHHHHHHHCCCCCCHHH--HHHHHHHHHhcCCHHHHHHHHHh
Q 021583 167 SIYYNRGMHEKMFEIFADMEELGVRPNVSI--VSMMGNAFQKLGMLDKYEKLKKK 219 (310)
Q Consensus 167 ~~~~~~g~~~~a~~l~~~m~~~g~~p~~~t--y~~li~~~~~~g~~~~a~~l~~~ 219 (310)
...+..|+.+- ++.+.+.|..++... -.+.+...+..|+.+-+..+++.
T Consensus 77 ~~A~~~~~~~~----v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 127 (285)
T 1wdy_A 77 LLAAIAGSVKL----LKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKR 127 (285)
T ss_dssp HHHHHHTCHHH----HHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHcCCHHH----HHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHh
Confidence 33455676554 444445666554311 12334445677888888777765
Done!