Query 021587
Match_columns 310
No_of_seqs 262 out of 1618
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 06:19:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021587.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021587hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s3t_A Nucleotide-binding prot 99.9 3E-25 1E-29 182.9 16.0 141 109-266 4-146 (146)
2 1mjh_A Protein (ATP-binding do 99.9 4.3E-25 1.5E-29 185.6 17.2 149 110-269 5-161 (162)
3 2dum_A Hypothetical protein PH 99.9 1.6E-24 5.6E-29 183.7 14.0 154 110-272 5-161 (170)
4 3idf_A USP-like protein; unive 99.9 2.8E-24 9.5E-29 175.7 14.6 136 110-266 1-138 (138)
5 3hgm_A Universal stress protei 99.9 2.7E-25 9.2E-30 183.0 8.5 143 110-265 2-147 (147)
6 3fg9_A Protein of universal st 99.9 6.1E-24 2.1E-28 177.8 15.8 139 109-266 14-156 (156)
7 2gm3_A Unknown protein; AT3G01 99.9 4.2E-24 1.4E-28 182.3 13.9 150 109-269 4-165 (175)
8 1tq8_A Hypothetical protein RV 99.9 5.1E-24 1.7E-28 181.6 13.1 142 109-269 16-160 (163)
9 3tnj_A Universal stress protei 99.9 2E-23 6.8E-28 173.0 13.1 143 109-269 5-149 (150)
10 2z08_A Universal stress protei 99.9 1.5E-23 5.1E-28 171.8 11.6 135 110-266 2-137 (137)
11 3dlo_A Universal stress protei 99.9 3.3E-23 1.1E-27 175.2 13.1 131 109-266 23-155 (155)
12 3fdx_A Putative filament prote 99.9 2.9E-23 9.8E-28 170.4 11.6 137 111-266 2-143 (143)
13 1jmv_A USPA, universal stress 99.9 7.1E-22 2.4E-26 161.9 9.0 138 110-269 2-140 (141)
14 3olq_A Universal stress protei 99.8 7.1E-21 2.4E-25 176.0 14.0 147 109-269 6-152 (319)
15 3ab8_A Putative uncharacterize 99.8 1.3E-20 4.4E-25 170.4 11.6 148 111-269 1-151 (268)
16 3cis_A Uncharacterized protein 99.8 4E-20 1.4E-24 171.3 14.8 141 109-269 18-163 (309)
17 3loq_A Universal stress protei 99.8 1.3E-20 4.4E-25 173.2 10.4 142 110-270 22-165 (294)
18 3mt0_A Uncharacterized protein 99.8 7E-20 2.4E-24 168.2 14.2 138 109-269 133-278 (290)
19 1q77_A Hypothetical protein AQ 99.8 1.9E-20 6.5E-25 153.1 8.5 132 109-266 3-138 (138)
20 3cis_A Uncharacterized protein 99.8 5E-19 1.7E-23 163.9 15.4 136 109-268 170-307 (309)
21 3mt0_A Uncharacterized protein 99.8 1.1E-19 3.7E-24 166.9 10.2 125 109-269 6-130 (290)
22 3olq_A Universal stress protei 99.8 3.1E-19 1.1E-23 164.9 12.2 143 109-269 155-307 (319)
23 3loq_A Universal stress protei 99.8 6.1E-19 2.1E-23 161.9 12.9 125 108-269 168-292 (294)
24 3ab8_A Putative uncharacterize 99.7 5.1E-17 1.7E-21 146.7 12.5 116 109-266 153-268 (268)
25 3a2k_A TRNA(Ile)-lysidine synt 93.5 0.41 1.4E-05 46.9 10.6 97 110-232 18-130 (464)
26 1wy5_A TILS, hypothetical UPF0 92.9 0.75 2.6E-05 42.5 11.1 96 110-232 24-136 (317)
27 2iel_A Hypothetical protein TT 87.6 1.4 4.7E-05 36.7 6.7 80 177-266 52-134 (138)
28 1ni5_A Putative cell cycle pro 85.6 3.8 0.00013 39.6 9.9 39 110-148 13-52 (433)
29 1k92_A Argininosuccinate synth 79.2 3.7 0.00013 40.4 7.0 36 109-148 9-44 (455)
30 3bl5_A Queuosine biosynthesis 77.7 14 0.00049 31.1 9.7 35 110-148 3-37 (219)
31 1zun_A Sulfate adenylyltransfe 75.4 5.5 0.00019 37.1 6.8 37 111-147 47-83 (325)
32 1o97_C Electron transferring f 72.8 14 0.00047 33.4 8.6 81 118-233 34-124 (264)
33 4grd_A N5-CAIR mutase, phospho 71.3 11 0.00038 32.4 7.1 65 187-266 30-97 (173)
34 1efp_B ETF, protein (electron 70.0 55 0.0019 29.2 11.9 80 119-233 35-125 (252)
35 1efv_B Electron transfer flavo 69.1 48 0.0017 29.7 11.3 80 119-233 38-128 (255)
36 2xry_A Deoxyribodipyrimidine p 68.9 18 0.00062 35.2 9.1 92 118-231 46-137 (482)
37 2ywx_A Phosphoribosylaminoimid 68.1 14 0.00048 31.2 7.0 68 187-269 17-84 (157)
38 1sur_A PAPS reductase; assimil 67.8 13 0.00044 31.8 7.0 34 111-148 45-78 (215)
39 2pg3_A Queuosine biosynthesis 67.6 24 0.00082 30.3 8.8 34 111-148 3-36 (232)
40 4b4k_A N5-carboxyaminoimidazol 65.9 20 0.00067 31.0 7.5 67 187-268 40-109 (181)
41 2nz2_A Argininosuccinate synth 65.7 15 0.00051 35.5 7.6 35 110-148 5-39 (413)
42 1xmp_A PURE, phosphoribosylami 64.8 18 0.00061 31.0 7.0 67 187-268 29-98 (170)
43 3kuu_A Phosphoribosylaminoimid 63.7 19 0.00064 31.0 7.0 66 187-267 30-98 (174)
44 1u11_A PURE (N5-carboxyaminoim 63.5 19 0.00064 31.2 6.9 67 187-268 39-108 (182)
45 3oow_A Phosphoribosylaminoimid 63.3 23 0.00077 30.2 7.4 67 187-268 23-92 (166)
46 3trh_A Phosphoribosylaminoimid 63.1 18 0.00061 31.0 6.7 67 187-268 24-93 (169)
47 2c5s_A THII, probable thiamine 62.9 50 0.0017 31.4 10.7 35 110-148 187-221 (413)
48 2hma_A Probable tRNA (5-methyl 61.7 33 0.0011 32.4 9.1 35 110-148 9-43 (376)
49 3ih5_A Electron transfer flavo 61.6 20 0.00067 31.4 7.0 86 111-232 4-102 (217)
50 1kor_A Argininosuccinate synth 60.7 18 0.00061 34.7 7.1 35 111-148 1-35 (400)
51 3ors_A N5-carboxyaminoimidazol 60.3 24 0.00082 30.0 7.0 66 187-267 21-89 (163)
52 3umv_A Deoxyribodipyrimidine p 59.8 21 0.00071 35.3 7.6 95 112-227 39-135 (506)
53 3rg8_A Phosphoribosylaminoimid 59.3 28 0.00095 29.4 7.2 66 187-267 20-89 (159)
54 1o4v_A Phosphoribosylaminoimid 59.2 25 0.00086 30.4 7.0 68 187-269 31-101 (183)
55 2ywb_A GMP synthase [glutamine 58.8 33 0.0011 33.6 8.8 34 111-148 210-243 (503)
56 3lp6_A Phosphoribosylaminoimid 57.5 22 0.00076 30.5 6.4 67 187-268 25-94 (174)
57 1iv0_A Hypothetical protein; r 56.4 15 0.00051 28.3 4.7 48 209-267 39-93 (98)
58 3g40_A Na-K-CL cotransporter; 55.9 27 0.00092 32.4 7.1 97 106-234 151-257 (294)
59 2oq2_A Phosphoadenosine phosph 54.1 24 0.00081 31.4 6.3 36 111-147 42-77 (261)
60 2wq7_A RE11660P; lyase-DNA com 53.7 44 0.0015 33.1 8.8 94 118-230 38-133 (543)
61 3tqi_A GMP synthase [glutamine 52.7 28 0.00097 34.4 7.2 35 111-148 231-265 (527)
62 1u3d_A Cryptochrome 1 apoprote 51.7 84 0.0029 30.7 10.4 96 112-230 13-110 (509)
63 2wsi_A FAD synthetase; transfe 51.3 45 0.0015 30.5 7.9 23 111-133 54-76 (306)
64 1np7_A DNA photolyase; protein 50.6 62 0.0021 31.4 9.2 95 118-230 15-109 (489)
65 2j07_A Deoxyribodipyrimidine p 47.7 45 0.0015 31.9 7.5 46 182-230 51-96 (420)
66 2l69_A Rossmann 2X3 fold prote 47.3 19 0.00065 28.2 3.9 51 183-234 13-63 (134)
67 2der_A TRNA-specific 2-thiouri 47.1 41 0.0014 31.9 7.1 35 109-147 16-50 (380)
68 2dpl_A GMP synthetase, GMP syn 47.0 35 0.0012 31.2 6.4 35 111-148 21-55 (308)
69 3g40_A Na-K-CL cotransporter; 46.6 45 0.0015 30.9 7.0 95 111-232 21-120 (294)
70 3fy4_A 6-4 photolyase; DNA rep 42.7 53 0.0018 32.7 7.4 45 183-230 68-112 (537)
71 2j4d_A Cryptochrome 3, cryptoc 42.4 93 0.0032 30.6 9.1 102 111-230 40-144 (525)
72 1vbk_A Hypothetical protein PH 38.8 1.8E+02 0.006 26.5 9.9 87 109-230 178-264 (307)
73 2h31_A Multifunctional protein 37.7 80 0.0027 30.7 7.5 69 185-268 281-353 (425)
74 3zqu_A Probable aromatic acid 37.1 41 0.0014 29.4 5.0 36 110-146 4-39 (209)
75 3qjg_A Epidermin biosynthesis 36.8 36 0.0012 28.8 4.5 34 111-145 6-39 (175)
76 2qv7_A Diacylglycerol kinase D 35.9 64 0.0022 29.4 6.4 72 186-269 45-116 (337)
77 1sbz_A Probable aromatic acid 35.9 45 0.0015 28.9 4.9 35 111-145 1-35 (197)
78 1owl_A Photolyase, deoxyribodi 34.4 63 0.0022 31.4 6.3 84 124-230 18-101 (484)
79 2ejb_A Probable aromatic acid 33.5 52 0.0018 28.1 4.9 33 111-144 2-34 (189)
80 1vl2_A Argininosuccinate synth 33.4 85 0.0029 30.4 6.9 34 110-147 14-47 (421)
81 3da8_A Probable 5'-phosphoribo 32.7 1.1E+02 0.0037 26.7 7.0 86 109-232 11-100 (215)
82 2e0i_A 432AA long hypothetical 32.5 95 0.0033 29.9 7.2 82 125-230 17-98 (440)
83 3kcq_A Phosphoribosylglycinami 31.9 1.4E+02 0.0047 26.0 7.5 87 109-232 7-93 (215)
84 1gpm_A GMP synthetase, XMP ami 31.5 1E+02 0.0035 30.2 7.4 35 111-148 228-262 (525)
85 1dnp_A DNA photolyase; DNA rep 31.2 59 0.002 31.5 5.5 48 182-230 55-104 (471)
86 3tqr_A Phosphoribosylglycinami 31.2 2.2E+02 0.0077 24.6 8.8 86 110-232 5-94 (215)
87 1g63_A Epidermin modifying enz 31.1 40 0.0014 28.6 3.8 35 111-146 3-37 (181)
88 3o1l_A Formyltetrahydrofolate 29.3 2.5E+02 0.0086 25.7 9.2 86 109-232 104-192 (302)
89 3n0v_A Formyltetrahydrofolate 29.1 2.1E+02 0.0072 25.9 8.6 86 109-232 89-177 (286)
90 3tvs_A Cryptochrome-1; circadi 28.7 87 0.003 31.1 6.3 85 125-229 20-107 (538)
91 3lou_A Formyltetrahydrofolate 28.4 2.6E+02 0.0089 25.4 9.1 86 109-232 94-182 (292)
92 1vhx_A Putative holliday junct 28.1 27 0.00093 28.7 2.1 54 208-269 42-100 (150)
93 2o8v_A Phosphoadenosine phosph 27.7 1.6E+02 0.0054 25.7 7.3 33 111-147 46-78 (252)
94 1v6t_A Hypothetical UPF0271 pr 27.4 1.7E+02 0.0058 26.5 7.4 55 178-232 84-147 (255)
95 1p3y_1 MRSD protein; flavoprot 25.5 60 0.002 27.9 3.9 35 110-145 8-42 (194)
96 1qzu_A Hypothetical protein MD 24.2 53 0.0018 28.5 3.4 37 109-145 18-54 (206)
97 2o2z_A Hypothetical protein; s 23.9 1.8E+02 0.0061 27.1 7.1 64 197-268 154-219 (323)
98 2fyw_A Conserved hypothetical 22.7 58 0.002 29.1 3.4 32 108-146 36-67 (267)
99 3rjz_A N-type ATP pyrophosphat 22.5 4E+02 0.014 23.4 10.6 95 111-232 5-101 (237)
100 3p9x_A Phosphoribosylglycinami 22.1 3.8E+02 0.013 23.1 9.2 86 111-232 3-92 (211)
101 3iwt_A 178AA long hypothetical 21.9 1.5E+02 0.0051 24.3 5.7 41 192-233 49-94 (178)
102 3nbm_A PTS system, lactose-spe 21.8 89 0.003 24.2 3.9 59 190-267 28-86 (108)
103 3hzh_A Chemotaxis response reg 21.5 2.7E+02 0.0092 21.1 7.7 50 210-269 70-121 (157)
104 3qk7_A Transcriptional regulat 21.4 3.3E+02 0.011 23.1 8.2 47 184-230 28-74 (294)
105 2ohh_A Type A flavoprotein FPR 21.0 4.4E+02 0.015 23.7 9.3 47 183-232 272-318 (404)
106 3fni_A Putative diflavin flavo 20.9 1.1E+02 0.0038 24.6 4.6 41 191-234 28-69 (159)
107 3lqk_A Dipicolinate synthase s 20.8 80 0.0027 27.3 3.8 35 110-145 7-42 (201)
108 2bon_A Lipid kinase; DAG kinas 20.8 1.5E+02 0.0052 26.9 5.9 72 189-271 50-122 (332)
109 1mvl_A PPC decarboxylase athal 20.6 1E+02 0.0035 26.8 4.5 34 110-145 19-52 (209)
110 3s40_A Diacylglycerol kinase; 20.6 1.3E+02 0.0043 27.0 5.3 70 188-270 31-100 (304)
111 1to6_A Glycerate kinase; glyce 20.5 88 0.003 29.8 4.3 43 220-269 277-319 (371)
112 2amj_A Modulator of drug activ 20.4 94 0.0032 26.2 4.2 47 182-231 33-80 (204)
113 3hly_A Flavodoxin-like domain; 20.4 1.4E+02 0.0048 23.9 5.1 39 192-233 25-63 (161)
No 1
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=99.93 E-value=3e-25 Score=182.88 Aligned_cols=141 Identities=14% Similarity=0.181 Sum_probs=120.0
Q ss_pred CCCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 021587 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (310)
Q Consensus 109 ~~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~ 188 (310)
.+++||||+|+|+.+.+|++||+++|...+++|++|||+++...... . .......+.++.++.+++.|+++
T Consensus 4 ~~~~ILv~~D~s~~s~~al~~A~~la~~~~a~l~ll~v~~~~~~~~~--~-------~~~~~~~~~~~~~~~~~~~l~~~ 74 (146)
T 3s3t_A 4 RYTNILVPVDSSDAAQAAFTEAVNIAQRHQANLTALYVVDDSAYHTP--A-------LDPVLSELLDAEAAHAKDAMRQR 74 (146)
T ss_dssp CCCEEEEECCSSHHHHHHHHHHHHHHHHHTCEEEEEEEEECCCCCCG--G-------GHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEcCCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCcccccc--c-------cccccHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999988999999999987532110 0 00123445666778889999999
Q ss_pred HHHhhcCCC-cEEEEEEEcCChHHHHHH-HhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEEEc
Q 021587 189 LDTCSQSKV-MVDTVLIESDLVAKAILD-LIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKVVC 266 (310)
Q Consensus 189 ~~~~~~~gV-~ve~~vveG~~~aeaIve-~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV~ 266 (310)
.+.+...|+ .++..+..|+ ++++|++ +|++.++||||||++|++. +.++ ++||++.+|+++++ ||||||+
T Consensus 75 ~~~~~~~g~~~~~~~~~~g~-~~~~I~~~~a~~~~~dliV~G~~~~~~--~~~~---~~Gs~~~~vl~~~~--~pVlvV~ 146 (146)
T 3s3t_A 75 QQFVATTSAPNLKTEISYGI-PKHTIEDYAKQHPEIDLIVLGATGTNS--PHRV---AVGSTTSYVVDHAP--CNVIVIR 146 (146)
T ss_dssp HHHHTTSSCCCCEEEEEEEC-HHHHHHHHHHHSTTCCEEEEESCCSSC--TTTC---SSCHHHHHHHHHCS--SEEEEEC
T ss_pred HHHHHhcCCcceEEEEecCC-hHHHHHHHHHhhcCCCEEEECCCCCCC--cceE---EEcchHHHHhccCC--CCEEEeC
Confidence 999988899 9998888885 6999999 9999999999999999977 6777 79999999999998 9999996
No 2
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=99.93 E-value=4.3e-25 Score=185.59 Aligned_cols=149 Identities=12% Similarity=0.154 Sum_probs=119.1
Q ss_pred CCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCC-----CcCCCCCCC--C-CCCCCChhHHHHHHHHHHHHH
Q 021587 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQV-----KFVPSPLGK--L-PRNQVNPEQLETFMAQETGKR 181 (310)
Q Consensus 110 ~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~-----~~ip~~~g~--i-p~~~~~~e~~e~~~~~~~e~a 181 (310)
+++||||+|+|+.+.+|++||+++|...+++|++|||+++. ......... + + ......+.+.++.++.+
T Consensus 5 ~~~ILv~vD~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 81 (162)
T 1mjh_A 5 YKKILYPTDFSETAEIALKHVKAFKTLKAEEVILLHVIDEREIKKRDIFSLLLGVAGLNK---SVEEFENELKNKLTEEA 81 (162)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHTCCSSCCEEEEEEEEEGGGTC--------------------CHHHHHHHHHHHHHHH
T ss_pred cceEEEEeCCCHHHHHHHHHHHHHHhhcCCeEEEEEEecCcccccccccccccccccccc---chhhhHHHHHHHHHHHH
Confidence 68999999999999999999999999899999999999753 110000000 1 1 00111334556677788
Q ss_pred HHHHHHHHHHhhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCce
Q 021587 182 RQLLQKFLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCE 261 (310)
Q Consensus 182 ~elL~~~~~~~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~Cp 261 (310)
++.|+++.+.+...|++++.++..|+ ++++|+++|+++++||||||+||++. ++++ ++|||+.+|+++++ ||
T Consensus 82 ~~~l~~~~~~~~~~g~~~~~~v~~G~-~~~~I~~~a~~~~~dlIV~G~~g~~~--~~~~---~~GSv~~~vl~~~~--~p 153 (162)
T 1mjh_A 82 KNKMENIKKELEDVGFKVKDIIVVGI-PHEEIVKIAEDEGVDIIIMGSHGKTN--LKEI---LLGSVTENVIKKSN--KP 153 (162)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEEC-HHHHHHHHHHHTTCSEEEEESCCSSC--CTTC---SSCHHHHHHHHHCC--SC
T ss_pred HHHHHHHHHHHHHcCCceEEEEcCCC-HHHHHHHHHHHcCCCEEEEcCCCCCC--ccce---EecchHHHHHHhCC--CC
Confidence 89999999988888999998888875 69999999999999999999999977 6777 79999999999998 99
Q ss_pred EEEEcCCc
Q 021587 262 IKVVCEGK 269 (310)
Q Consensus 262 VlVV~~~k 269 (310)
|+||+...
T Consensus 154 Vlvv~~~~ 161 (162)
T 1mjh_A 154 VLVVKRKN 161 (162)
T ss_dssp EEEECCCC
T ss_pred EEEEeCCC
Confidence 99998753
No 3
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=99.92 E-value=1.6e-24 Score=183.70 Aligned_cols=154 Identities=10% Similarity=0.045 Sum_probs=114.6
Q ss_pred CCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCCh-hHHHHHHHHHHHHHHHHHHHH
Q 021587 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNP-EQLETFMAQETGKRRQLLQKF 188 (310)
Q Consensus 110 ~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~-e~~e~~~~~~~e~a~elL~~~ 188 (310)
+++||||+|+|+.+.+|++||+++|...+++|++|||+++... ......++..+..+ ...+.+.++.++.+++.|+++
T Consensus 5 ~~~ILv~vD~s~~s~~al~~A~~la~~~~a~l~ll~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 83 (170)
T 2dum_A 5 FRKVLFPTDFSEGAYRAVEVFEKRNKMEVGEVILLHVIDEGTL-EELMDGYSFFYDNAEIELKDIKEKLKEEASRKLQEK 83 (170)
T ss_dssp CSEEEEECCSSHHHHHHHHHHHHHCCSCCSEEEEEEEEETTGG-GCCC------------CCTTSHHHHHHHHHHHHHHH
T ss_pred cceEEEEecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCccc-cccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999976421 00000011000000 000122344556777888888
Q ss_pred HHHhhcCCCcEEE--EEEEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEEEc
Q 021587 189 LDTCSQSKVMVDT--VLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKVVC 266 (310)
Q Consensus 189 ~~~~~~~gV~ve~--~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV~ 266 (310)
.+.+...|++++. .+..|+ ++++|+++|+++++||||||+||++. ++++ ++||++.+|+++++ ||||||+
T Consensus 84 ~~~~~~~g~~~~~~~~~~~g~-~~~~I~~~a~~~~~DlIV~G~~g~~~--~~~~---~~Gsv~~~vl~~~~--~PVlvv~ 155 (170)
T 2dum_A 84 AEEVKRAFRAKNVRTIIRFGI-PWDEIVKVAEEENVSLIILPSRGKLS--LSHE---FLGSTVMRVLRKTK--KPVLIIK 155 (170)
T ss_dssp HHHHHHHTTCSEEEEEEEEEC-HHHHHHHHHHHTTCSEEEEESCCCCC----TT---CCCHHHHHHHHHCS--SCEEEEC
T ss_pred HHHHHHcCCceeeeeEEecCC-hHHHHHHHHHHcCCCEEEECCCCCCc--cccc---eechHHHHHHHhCC--CCEEEEc
Confidence 8887777888887 777775 69999999999999999999999977 6777 79999999999998 9999999
Q ss_pred CCcccc
Q 021587 267 EGKEVI 272 (310)
Q Consensus 267 ~~k~v~ 272 (310)
....-.
T Consensus 156 ~~~~~~ 161 (170)
T 2dum_A 156 EVDENE 161 (170)
T ss_dssp CCCCC-
T ss_pred cCCccc
Confidence 765433
No 4
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=99.92 E-value=2.8e-24 Score=175.74 Aligned_cols=136 Identities=20% Similarity=0.275 Sum_probs=114.3
Q ss_pred CCEEEEeecCCHHHHHHHHHHHHHh-cCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHH-HHHHHHHHH
Q 021587 110 EDIIYVAVGKSQSSMDALSWTLRHA-VNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQET-GKRRQLLQK 187 (310)
Q Consensus 110 ~~kILVAVDgSe~S~~AL~wAl~lA-~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~-e~a~elL~~ 187 (310)
+++||||+|+|+.+.+|++||+++| ...+++|++|||+++.... .. .........++.+ +.+++.|++
T Consensus 1 ~~~ILv~~D~s~~s~~al~~a~~la~~~~~a~l~ll~v~~~~~~~----~~------~~~~~~~~~~~~~~~~~~~~l~~ 70 (138)
T 3idf_A 1 MKKLLFAIDDTEACERAAQYILDMFGKDADCTLTLIHVKPEFMLY----GE------AVLAAYDEIEMKEEEKAKLLTQK 70 (138)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHHHHTTCTTEEEEEEEEECCCCCC----HH------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCHHHHHHHHHHHHHhccCCCCEEEEEEEecCCCcc----cc------cccCcHHHHHHHHHHHHHHHHHH
Confidence 3689999999999999999999999 8899999999999865321 00 0011123445566 788899999
Q ss_pred HHHHhhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEEEc
Q 021587 188 FLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKVVC 266 (310)
Q Consensus 188 ~~~~~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV~ 266 (310)
+.+.+...|++++..+..|+ ++++|+++|+ ++||||||+||++. +.++ + ||++.+|+++++ |||||||
T Consensus 71 ~~~~~~~~g~~~~~~v~~g~-~~~~I~~~a~--~~dliV~G~~~~~~--~~~~---~-Gs~~~~vl~~~~--~pVlvv~ 138 (138)
T 3idf_A 71 FSTFFTEKGINPFVVIKEGE-PVEMVLEEAK--DYNLLIIGSSENSF--LNKI---F-ASHQDDFIQKAP--IPVLIVK 138 (138)
T ss_dssp HHHHHHTTTCCCEEEEEESC-HHHHHHHHHT--TCSEEEEECCTTST--TSSC---C-CCTTCHHHHHCS--SCEEEEC
T ss_pred HHHHHHHCCCCeEEEEecCC-hHHHHHHHHh--cCCEEEEeCCCcch--HHHH---h-CcHHHHHHhcCC--CCEEEeC
Confidence 99999888999998888875 6999999999 99999999999977 6777 7 999999999998 9999996
No 5
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=99.92 E-value=2.7e-25 Score=183.01 Aligned_cols=143 Identities=15% Similarity=0.193 Sum_probs=113.6
Q ss_pred CCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 021587 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFL 189 (310)
Q Consensus 110 ~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~~ 189 (310)
+++||||+|+|+.|.+|++||+++|...+++|++|||+++........+..+ ....+.+.+..++.+++.|+++.
T Consensus 2 ~~~ILv~vD~s~~s~~al~~A~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~ 76 (147)
T 3hgm_A 2 FNRIMVPVDGSKGAVKALEKGVGLQQLTGAELYILCVFKHHSLLEASLSMAR-----PEQLDIPDDALKDYATEIAVQAK 76 (147)
T ss_dssp CSEEEEECCSBHHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHTBSSCC-----CGGGCCCTTHHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCcccccccccccC-----hhhhhhHHHHHHHHHHHHHHHHH
Confidence 5899999999999999999999999988999999999986431000000001 01111123345567788888988
Q ss_pred HHhhcCCCcE---EEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEEE
Q 021587 190 DTCSQSKVMV---DTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKVV 265 (310)
Q Consensus 190 ~~~~~~gV~v---e~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV 265 (310)
+.+...|+.+ +..+..|+ ++++|+++|+++++||||||+||++. ++++ ++||++.+|+++++ |||+||
T Consensus 77 ~~~~~~g~~~~~~~~~~~~g~-~~~~I~~~a~~~~~dliV~G~~~~~~--~~~~---~~Gs~~~~vl~~~~--~pVlvV 147 (147)
T 3hgm_A 77 TRATELGVPADKVRAFVKGGR-PSRTIVRFARKRECDLVVIGAQGTNG--DKSL---LLGSVAQRVAGSAH--CPVLVV 147 (147)
T ss_dssp HHHHHTTCCGGGEEEEEEESC-HHHHHHHHHHHTTCSEEEECSSCTTC--CSCC---CCCHHHHHHHHHCS--SCEEEC
T ss_pred HHHHhcCCCccceEEEEecCC-HHHHHHHHHHHhCCCEEEEeCCCCcc--ccce---eeccHHHHHHhhCC--CCEEEC
Confidence 8888889888 88888774 69999999999999999999999876 5777 79999999999998 999986
No 6
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=99.91 E-value=6.1e-24 Score=177.75 Aligned_cols=139 Identities=17% Similarity=0.204 Sum_probs=114.6
Q ss_pred CCCEEEEeec--CCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 021587 109 EEDIIYVAVG--KSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQ 186 (310)
Q Consensus 109 ~~~kILVAVD--gSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~ 186 (310)
.+++||||+| +|+.+.+|++||+++|...+++|++|||+++.... . .. .. . ..+.+..++.+++.|+
T Consensus 14 ~~~~ILv~vD~~~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~-~-~~-----~~-~---~~~~~~~~~~~~~~l~ 82 (156)
T 3fg9_A 14 VYRRILLTVDEDDNTSSERAFRYATTLAHDYDVPLGICSVLESEDIN-I-FD-----SL-T---PSKIQAKRKHVEDVVA 82 (156)
T ss_dssp CCC-EEEECCSCCCHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCTT-C-CC-----SS-H---HHHHHHHHHHHHHHHH
T ss_pred cCceEEEEECCCCCHHHHHHHHHHHHHHHhcCCEEEEEEEEeCCCcc-c-cc-----cC-C---HHHHHHHHHHHHHHHH
Confidence 5789999999 99999999999999999889999999999875321 1 01 01 1 2345566778888999
Q ss_pred HHHHHhhcCCC-cEEEEEEEcCChHHHHHHH-hccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEE
Q 021587 187 KFLDTCSQSKV-MVDTVLIESDLVAKAILDL-IPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKV 264 (310)
Q Consensus 187 ~~~~~~~~~gV-~ve~~vveG~~~aeaIve~-A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlV 264 (310)
++.+.+...|+ .++..+..+++++++|+++ |++.++||||||+||++. ++ . ++||++.+|+++++ |||||
T Consensus 83 ~~~~~~~~~g~~~~~~~v~~~g~~~~~I~~~~a~~~~~DlIV~G~~g~~~--~~-~---~~Gs~~~~vl~~a~--~PVlv 154 (156)
T 3fg9_A 83 EYVQLAEQRGVNQVEPLVYEGGDVDDVILEQVIPEFKPDLLVTGADTEFP--HS-K---IAGAIGPRLARKAP--ISVIV 154 (156)
T ss_dssp HHHHHHHHHTCSSEEEEEEECSCHHHHHHHTHHHHHCCSEEEEETTCCCT--TS-S---SCSCHHHHHHHHCS--SEEEE
T ss_pred HHHHHHHHcCCCceEEEEEeCCCHHHHHHHHHHHhcCCCEEEECCCCCCc--cc-e---eecchHHHHHHhCC--CCEEE
Confidence 99888888899 5888888834579999999 999999999999999977 55 3 58999999999999 99999
Q ss_pred Ec
Q 021587 265 VC 266 (310)
Q Consensus 265 V~ 266 (310)
|+
T Consensus 155 V~ 156 (156)
T 3fg9_A 155 VR 156 (156)
T ss_dssp EC
T ss_pred eC
Confidence 96
No 7
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=99.91 E-value=4.2e-24 Score=182.28 Aligned_cols=150 Identities=21% Similarity=0.280 Sum_probs=108.7
Q ss_pred CCCEEEEeecCCH---------HHHHHHHHHHHHhcC---CCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHH
Q 021587 109 EEDIIYVAVGKSQ---------SSMDALSWTLRHAVN---PSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQ 176 (310)
Q Consensus 109 ~~~kILVAVDgSe---------~S~~AL~wAl~lA~~---~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~ 176 (310)
.+++||||+|+|+ .+.+||+||++++.+ .+++|++|||+++... .. .. ...........+.+.++
T Consensus 4 ~~~~ILv~vD~s~~~~~~~~~~~s~~al~~a~~la~~~~~~~a~l~ll~v~~~~~~-~~-~~-~~~~~~~~~~~~~~~~~ 80 (175)
T 2gm3_A 4 EPTKVMVAVNASTIKDYPNPSISCKRAFEWTLEKIVRSNTSDFKILLLHVQVVDED-GF-DD-VDSIYASPEDFRDMRQS 80 (175)
T ss_dssp -CEEEEEECCBCSSSCTTCBCHHHHHHHHHHHHHTTTTCTTSEEEEEEEEEC-------------CCCCSHHHHHHHTTS
T ss_pred CccEEEEEECCCcccccccccHHHHHHHHHHHHHhhcccCCCCEEEEEEEeecccc-cc-cc-cccccCCHHHHHHHHHH
Confidence 4689999999999 999999999998754 5899999999864321 00 00 00001123333344444
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhC
Q 021587 177 ETGKRRQLLQKFLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTA 256 (310)
Q Consensus 177 ~~e~a~elL~~~~~~~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~A 256 (310)
.++.+++.|+++.+.+...|+.++.++..|+ ++++|+++|+++++||||||+||++. ++++ ++||++.+|++++
T Consensus 81 ~~~~~~~~l~~~~~~~~~~g~~~~~~v~~G~-~~~~I~~~a~~~~~DLIVmG~~g~~~--~~~~---~~Gsva~~vl~~a 154 (175)
T 2gm3_A 81 NKAKGLHLLEFFVNKCHEIGVGCEAWIKTGD-PKDVICQEVKRVRPDFLVVGSRGLGR--FQKV---FVGTVSAFCVKHA 154 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCEEEEEEEESC-HHHHHHHHHHHHCCSEEEEEECCCC-------------CHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHCCCceEEEEecCC-HHHHHHHHHHHhCCCEEEEeCCCCCh--hhhh---hcCchHHHHHhCC
Confidence 5566778888888888778899988888875 69999999999999999999999977 6777 7999999999999
Q ss_pred CCCceEEEEcCCc
Q 021587 257 PETCEIKVVCEGK 269 (310)
Q Consensus 257 p~~CpVlVV~~~k 269 (310)
+ ||||||+...
T Consensus 155 ~--~pVlvv~~~~ 165 (175)
T 2gm3_A 155 E--CPVMTIKRNA 165 (175)
T ss_dssp S--SCEEEEECCG
T ss_pred C--CCEEEEcCCc
Confidence 8 9999999754
No 8
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=99.91 E-value=5.1e-24 Score=181.64 Aligned_cols=142 Identities=15% Similarity=0.147 Sum_probs=109.8
Q ss_pred CCCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEE--EEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 021587 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLI--HVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQ 186 (310)
Q Consensus 109 ~~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LV--HVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~ 186 (310)
.+++||||+|+|+.|.+|++||+++|. .+++|++| ||+++.... .+. . .. ...+.++.++.+++.|+
T Consensus 16 ~~~~ILv~vD~s~~s~~al~~A~~lA~-~~a~l~ll~a~v~~~~~~~---~~~-~---~~---~~~~~~~~~~~~~~~l~ 84 (163)
T 1tq8_A 16 AYKTVVVGTDGSDSSMRAVDRAAQIAG-ADAKLIIASAYLPQHEDAR---AAD-I---LK---DESYKVTGTAPIYEILH 84 (163)
T ss_dssp CCCEEEEECCSSHHHHHHHHHHHHHHT-TTSEEEEEEECCC------------------------------CCTHHHHHH
T ss_pred cCCEEEEEcCCCHHHHHHHHHHHHHhC-CCCEEEEEEeeeccCcccc---ccc-c---cc---cHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999 99999999 877653210 010 0 00 01222334556778888
Q ss_pred HHHHHhhcCCCc-EEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEEE
Q 021587 187 KFLDTCSQSKVM-VDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKVV 265 (310)
Q Consensus 187 ~~~~~~~~~gV~-ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV 265 (310)
++.+.+...|++ ++..+..|+ ++++|+++|++.++||||||++|++. ++++ ++||++.+|+++++ |||+||
T Consensus 85 ~~~~~~~~~gv~~v~~~v~~G~-~~~~I~~~a~~~~~DLIV~G~~g~~~--~~~~---~lGSva~~vl~~a~--~PVlvV 156 (163)
T 1tq8_A 85 DAKERAHNAGAKNVEERPIVGA-PVDALVNLADEEKADLLVVGNVGLST--IAGR---LLGSVPANVSRRAK--VDVLIV 156 (163)
T ss_dssp HHHHHHHTTTCCEEEEEEECSS-HHHHHHHHHHHTTCSEEEEECCCCCS--HHHH---HTBBHHHHHHHHTT--CEEEEE
T ss_pred HHHHHHHHcCCCeEEEEEecCC-HHHHHHHHHHhcCCCEEEECCCCCCc--ccce---eeccHHHHHHHhCC--CCEEEE
Confidence 888888888998 988888775 69999999999999999999999987 6787 79999999999998 999999
Q ss_pred cCCc
Q 021587 266 CEGK 269 (310)
Q Consensus 266 ~~~k 269 (310)
+...
T Consensus 157 ~~~~ 160 (163)
T 1tq8_A 157 HTTE 160 (163)
T ss_dssp CCC-
T ss_pred eCCC
Confidence 8643
No 9
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=99.90 E-value=2e-23 Score=172.96 Aligned_cols=143 Identities=19% Similarity=0.166 Sum_probs=100.4
Q ss_pred CCCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCC-CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 021587 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVP-SPLGKLPRNQVNPEQLETFMAQETGKRRQLLQK 187 (310)
Q Consensus 109 ~~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip-~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~ 187 (310)
.+++||||+|+|+.|.+|++||+++|...+++|++|||+++..... ...+..+.. .+.+.++.++++++.|++
T Consensus 5 ~~~~ILv~vD~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~ 78 (150)
T 3tnj_A 5 VYHHILLAVDFSSEDSQVVQKVRNLASQIGARLSLIHVLDNIPMPDTPYGTAIPLD------TETTYDAMLDVEKQKLSQ 78 (150)
T ss_dssp CCSEEEEECCCSTTHHHHHHHHHHHHHHHTCEEEEEEEEC--------CTTCCCSS------SCCCHHHHHHHHHHHHHH
T ss_pred ccceEEEEeCCCHHHHHHHHHHHHHHhhcCCEEEEEEEEcCccccccccccccCcC------HHHHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999998899999999998643210 111111111 011233445566666766
Q ss_pred HHHHhhcCCCc-EEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEEEc
Q 021587 188 FLDTCSQSKVM-VDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKVVC 266 (310)
Q Consensus 188 ~~~~~~~~gV~-ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV~ 266 (310)
+.+.+ |+. ++..+..| .++++|+++|+++++||||||+||++. +. + ++||++.+|+++++ |||+||+
T Consensus 79 ~~~~~---~~~~~~~~~~~g-~~~~~I~~~a~~~~~dliV~G~~~~~~--~~-~---~~Gs~~~~vl~~~~--~pVlvv~ 146 (150)
T 3tnj_A 79 IGNTL---GIDPAHRWLVWG-EPREEIIRIAEQENVDLIVVGSHGRHG--LA-L---LLGSTANSVLHYAK--CDVLAVR 146 (150)
T ss_dssp HHHHH---TCCGGGEEEEES-CHHHHHHHHHHHTTCSEEEEEEC--------------CCCHHHHHHHHCS--SEEEEEE
T ss_pred HHHHc---CCCcceEEEecC-CHHHHHHHHHHHcCCCEEEEecCCCCC--cC-e---EecchHHHHHHhCC--CCEEEEe
Confidence 65544 455 35566666 569999999999999999999999977 56 6 79999999999998 9999999
Q ss_pred CCc
Q 021587 267 EGK 269 (310)
Q Consensus 267 ~~k 269 (310)
...
T Consensus 147 ~~~ 149 (150)
T 3tnj_A 147 LRD 149 (150)
T ss_dssp CCC
T ss_pred CCC
Confidence 754
No 10
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=99.90 E-value=1.5e-23 Score=171.81 Aligned_cols=135 Identities=20% Similarity=0.224 Sum_probs=104.5
Q ss_pred CCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 021587 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFL 189 (310)
Q Consensus 110 ~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~~ 189 (310)
+++||||+|+|+.+.+|++||+++|...+++|++|||+++... . ...+ .+ +.+.++.++.+++.|+++.
T Consensus 2 ~~~ILv~~D~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~-~--~~~~-----~~---~~~~~~~~~~~~~~l~~~~ 70 (137)
T 2z08_A 2 FKTILLAYDGSEHARRAAEVAKAEAEAHGARLIVVHAYEPVPD-Y--LGEP-----FF---EEALRRRLERAEGVLEEAR 70 (137)
T ss_dssp CSEEEEECCSSHHHHHHHHHHHHHHHHHTCEEEEEEEECC-------------------------CHHHHHHHHHHHHHH
T ss_pred cceEEEEeCCCHHHHHHHHHHHHHHhhcCCEEEEEEEecCCCc-c--cccc-----ch---HHHHHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999988999999999975321 0 0100 01 1122344556677777765
Q ss_pred HHhhcCCC-cEEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEEEc
Q 021587 190 DTCSQSKV-MVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKVVC 266 (310)
Q Consensus 190 ~~~~~~gV-~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV~ 266 (310)
+. .|+ +++..+..|+ ++++|+++|+++++||||||+||++. ++++ ++||++.+|+++++ |||+||+
T Consensus 71 ~~---~g~~~~~~~~~~g~-~~~~I~~~a~~~~~dliV~G~~~~~~--~~~~---~~Gs~~~~vl~~~~--~pVlvv~ 137 (137)
T 2z08_A 71 AL---TGVPKEDALLLEGV-PAEAILQAARAEKADLIVMGTRGLGA--LGSL---FLGSQSQRVVAEAP--CPVLLVR 137 (137)
T ss_dssp HH---HCCCGGGEEEEESS-HHHHHHHHHHHTTCSEEEEESSCTTC--CSCS---SSCHHHHHHHHHCS--SCEEEEC
T ss_pred HH---cCCCccEEEEEecC-HHHHHHHHHHHcCCCEEEECCCCCch--hhhh---hhccHHHHHHhcCC--CCEEEeC
Confidence 54 467 7777777774 79999999999999999999999876 5777 79999999999998 9999986
No 11
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=99.90 E-value=3.3e-23 Score=175.24 Aligned_cols=131 Identities=16% Similarity=0.164 Sum_probs=109.8
Q ss_pred CCCEEEEeecC-CHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 021587 109 EEDIIYVAVGK-SQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQK 187 (310)
Q Consensus 109 ~~~kILVAVDg-Se~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~ 187 (310)
-+++||||+|+ |+.+.+|++||+++|...+++|++|||+++... .. +...+.+++.|++
T Consensus 23 m~~~ILv~vD~~s~~s~~al~~A~~la~~~~a~l~llhV~~~~~~------------~~--------~~~~~~~~~~l~~ 82 (155)
T 3dlo_A 23 IYMPIVVAVDKKSDRAERVLRFAAEEARLRGVPVYVVHSLPGGGR------------TK--------DEDIIEAKETLSW 82 (155)
T ss_dssp CCCCEEEECCSSSHHHHHHHHHHHHHHHHHTCCEEEEEEECCSTT------------SC--------HHHHHHHHHHHHH
T ss_pred ccCeEEEEECCCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCCCc------------cc--------HHHHHHHHHHHHH
Confidence 46899999999 999999999999999988999999999975310 01 1234567778888
Q ss_pred HHHHhhcCCCcEEEEE-EEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEEEc
Q 021587 188 FLDTCSQSKVMVDTVL-IESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKVVC 266 (310)
Q Consensus 188 ~~~~~~~~gV~ve~~v-veG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV~ 266 (310)
+.+.+.+.++.++..+ +..++++++|+++|++.++||||||++|++. ++++ ++||++.+|+++++ ||||||+
T Consensus 83 ~~~~~~~~g~~~~~~~~v~~G~~~~~I~~~a~~~~~DLIV~G~~g~~~--~~~~---~lGSv~~~vl~~a~--~PVLvVr 155 (155)
T 3dlo_A 83 AVSIIRKEGAEGEEHLLVRGKEPPDDIVDFADEVDAIAIVIGIRKRSP--TGKL---IFGSVARDVILKAN--KPVICIK 155 (155)
T ss_dssp HHHHHHHTTCCEEEEEEESSSCHHHHHHHHHHHTTCSEEEEECCEECT--TSCE---ECCHHHHHHHHHCS--SCEEEEC
T ss_pred HHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHcCCCEEEECCCCCCC--CCCE---EeccHHHHHHHhCC--CCEEEeC
Confidence 8888888888887643 3445679999999999999999999999876 6777 79999999999998 9999985
No 12
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=99.89 E-value=2.9e-23 Score=170.37 Aligned_cols=137 Identities=15% Similarity=0.205 Sum_probs=99.2
Q ss_pred CEEEEeecCCHH--HHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 021587 111 DIIYVAVGKSQS--SMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (310)
Q Consensus 111 ~kILVAVDgSe~--S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~ 188 (310)
++||||+|+|+. +.+|++||+++|...+++|++|||+++...... .+. . . ... .+..++..++.++.+
T Consensus 2 k~ILv~vD~s~~~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~-~~~---~-~-~~~----~~~~~~~~~~~~~~l 71 (143)
T 3fdx_A 2 NAILVPIDISDKEFTERIISHVESEARIDDAEVHFLTVIPSLPYYAS-LGM---A-Y-TAE----LPGMDELREGSETQL 71 (143)
T ss_dssp CEEEEECCTTCSSCCTTHHHHHHHHHHHHTCEEEEEEEECC--------------------------CHHHHHHHHHHHH
T ss_pred CEEEEEecCChHhhHHHHHHHHHHHHHhcCCeEEEEEEecCCccccc-ccc---c-c-cch----hhhHHHHHHHHHHHH
Confidence 799999999999 999999999999989999999999987532111 010 0 0 000 111122333344444
Q ss_pred HHHhhcCC---CcEEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEEE
Q 021587 189 LDTCSQSK---VMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKVV 265 (310)
Q Consensus 189 ~~~~~~~g---V~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV 265 (310)
.+.+.+.+ +.++..+..| +++++|+++|+++++||||||+|| +. ++++ ++||++.+|+++++ ||||||
T Consensus 72 ~~~~~~~~~~~~~v~~~~~~g-~~~~~I~~~a~~~~~dliV~G~~~-~~--~~~~---~~Gs~~~~v~~~~~--~pVlvv 142 (143)
T 3fdx_A 72 KEIAKKFSIPEDRMHFHVAEG-SPKDKILALAKSLPADLVIIASHR-PD--ITTY---LLGSNAAAVVRHAE--CSVLVV 142 (143)
T ss_dssp HHHHTTSCCCGGGEEEEEEES-CHHHHHHHHHHHTTCSEEEEESSC-TT--CCSC---SSCHHHHHHHHHCS--SEEEEE
T ss_pred HHHHHHcCCCCCceEEEEEec-ChHHHHHHHHHHhCCCEEEEeCCC-CC--Ceee---eeccHHHHHHHhCC--CCEEEe
Confidence 44454443 5678888877 579999999999999999999997 44 4776 79999999999998 999999
Q ss_pred c
Q 021587 266 C 266 (310)
Q Consensus 266 ~ 266 (310)
|
T Consensus 143 ~ 143 (143)
T 3fdx_A 143 R 143 (143)
T ss_dssp C
T ss_pred C
Confidence 6
No 13
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=99.86 E-value=7.1e-22 Score=161.93 Aligned_cols=138 Identities=17% Similarity=0.158 Sum_probs=101.3
Q ss_pred CCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 021587 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFL 189 (310)
Q Consensus 110 ~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~~ 189 (310)
+++||||+|+|+.+.+|++||+++|...+++|++|||+++.... . .+. .....+.+.++.++++++.|+++.
T Consensus 2 ~~~ILv~~D~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~-~-~~~------~~~~~~~~~~~~~~~~~~~l~~~~ 73 (141)
T 1jmv_A 2 YKHILVAVDLSEESPILLKKAVGIAKRHDAKLSIIHVDVNFSDL-Y-TGL------IDVNMSSMQDRISTETQKALLDLA 73 (141)
T ss_dssp CSEEEEEECCSTTHHHHHHHHHHHHHHHTCEEEEEEEEECCGGG-C-CCC------EEHHHHHHTTCCCCHHHHHHHHHH
T ss_pred CceEEEEecCchhhHHHHHHHHHHHHhcCCEEEEEEEecCchhh-h-ccc------cccchHHHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999889999999999542110 0 111 011112222222345556666654
Q ss_pred HHhhcCCCcE-EEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEEEcCC
Q 021587 190 DTCSQSKVMV-DTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKVVCEG 268 (310)
Q Consensus 190 ~~~~~~gV~v-e~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV~~~ 268 (310)
+. .|+.+ +..+..|+ ++++|+++|+++++||||||++ ++. ++++ ||++.+|+++++ |||+||+.+
T Consensus 74 ~~---~~~~~~~~~~~~g~-~~~~I~~~a~~~~~dliV~G~~-~~~--~~~l-----gs~~~~vl~~~~--~pVlvv~~~ 139 (141)
T 1jmv_A 74 ES---VDYPISEKLSGSGD-LGQVLSDAIEQYDVDLLVTGHH-QDF--WSKL-----MSSTRQVMNTIK--IDMLVVPLR 139 (141)
T ss_dssp HH---SSSCCCCEEEEEEC-HHHHHHHHHHHTTCCEEEEEEC-CCC--HHHH-----HHHHHHHHTTCC--SEEEEEECC
T ss_pred HH---cCCCceEEEEecCC-HHHHHHHHHHhcCCCEEEEeCC-Cch--hhhh-----cchHHHHHhcCC--CCEEEeeCC
Confidence 43 46665 45566664 6999999999999999999999 876 4543 799999999998 999999875
Q ss_pred c
Q 021587 269 K 269 (310)
Q Consensus 269 k 269 (310)
.
T Consensus 140 ~ 140 (141)
T 1jmv_A 140 D 140 (141)
T ss_dssp C
T ss_pred C
Confidence 3
No 14
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=99.85 E-value=7.1e-21 Score=175.98 Aligned_cols=147 Identities=10% Similarity=0.100 Sum_probs=119.4
Q ss_pred CCCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 021587 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (310)
Q Consensus 109 ~~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~ 188 (310)
.+++||||+|+|+.+..|++||+.+|+..+++|++|||+++... .. .+. ......+.+.+...+.+++.|+++
T Consensus 6 ~~k~ILv~~D~s~~s~~al~~A~~lA~~~~a~l~ll~v~~~~~~-~~-~~~-----~~~~~~~~~~~~~~~~~~~~l~~~ 78 (319)
T 3olq_A 6 KYQNLLVVIDPNQDDQPALRRAVYIVQRNGGRIKAFLPVYDLSY-DM-TTL-----LSPDERNAMRKGVINQKTAWIKQQ 78 (319)
T ss_dssp CSCEEEEECCTTCSCCHHHHHHHHHHHHHCCEEEEEEEECCGGG-GC-TTT-----SCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEECCCcccHHHHHHHHHHHHHcCCeEEEEEEecccch-hh-ccc-----cChhhHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999875321 11 111 123344455566667788889999
Q ss_pred HHHhhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEEEcCC
Q 021587 189 LDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKVVCEG 268 (310)
Q Consensus 189 ~~~~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV~~~ 268 (310)
.+.+...|+.++..+...+.+.+.|+++|++.++||||||++|++. ++++ ++||++.+|+++++ ||||||+.+
T Consensus 79 ~~~~~~~~v~~~~~~~~~g~~~~~i~~~a~~~~~DLiV~G~~g~~~--~~~~---~~Gs~~~~vl~~~~--~PVlvv~~~ 151 (319)
T 3olq_A 79 ARYYLEAGIQIDIKVIWHNRPYEAIIEEVITDKHDLLIKMAHQHDK--LGSL---IFTPLDWQLLRKCP--APVWMVKDK 151 (319)
T ss_dssp HHHHHHTTCCEEEEEEECSCHHHHHHHHHHHHTCSEEEEEEBCC----CCSC---BCCHHHHHHHHHCS--SCEEEEESS
T ss_pred HHHHhhcCCeEEEEEEecCChHHHHHHHHHhcCCCEEEEecCcCch--hhcc---cccccHHHHHhcCC--CCEEEecCc
Confidence 8888888999998888344579999999999999999999999876 5776 79999999999998 999999976
Q ss_pred c
Q 021587 269 K 269 (310)
Q Consensus 269 k 269 (310)
.
T Consensus 152 ~ 152 (319)
T 3olq_A 152 E 152 (319)
T ss_dssp C
T ss_pred c
Confidence 4
No 15
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=99.83 E-value=1.3e-20 Score=170.39 Aligned_cols=148 Identities=18% Similarity=0.128 Sum_probs=113.2
Q ss_pred CEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcC-CCCCCCCCCCCCChhHHH-HHHHHHHHHHHHHHHHH
Q 021587 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFV-PSPLGKLPRNQVNPEQLE-TFMAQETGKRRQLLQKF 188 (310)
Q Consensus 111 ~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~i-p~~~g~ip~~~~~~e~~e-~~~~~~~e~a~elL~~~ 188 (310)
++||||+|+|+.+.+|++||+++|+..+++|++|||+++.... ....+ .+.......+++ ...+..++.+++.|+++
T Consensus 1 k~ILv~vD~s~~s~~al~~A~~lA~~~~a~l~ll~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 79 (268)
T 3ab8_A 1 MRILLATDGSPQARGAEALAEWLAYKLSAPLTVLFVVDTRLARIPELLD-FGALTVPVPVLRTELERALALRGEAVLERV 79 (268)
T ss_dssp CCEEEECCSCGGGHHHHHHHHHHHHHHTCCEEEEEEEEHHHHTHHHHC--------CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHHhCCcEEEEEEeccCCcccccccC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4799999999999999999999999889999999998753210 00001 000000000111 11344566788899999
Q ss_pred HHHhhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCC-chhhhhcccCCCCcHHHHHHhhCCCCceEEEEcC
Q 021587 189 LDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSS-LRVLRKSKSGRISGMADHILQTAPETCEIKVVCE 267 (310)
Q Consensus 189 ~~~~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g-~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV~~ 267 (310)
.+.+...|++++..+..|+ ++++|+++ +.++||||||+||++ . ++++ ++||++.+|+++++ |||+||+.
T Consensus 80 ~~~~~~~g~~~~~~~~~g~-~~~~I~~~--~~~~dliV~G~~g~~~~--~~~~---~~Gs~~~~v~~~a~--~PVlvv~~ 149 (268)
T 3ab8_A 80 RQSALAAGVAVEAVLEEGV-PHEAILRR--ARAADLLVLGRSGEAHG--DGFG---GLGSTADRVLRASP--VPVLLAPG 149 (268)
T ss_dssp HHHHHHTTCCEEEEEEEEC-HHHHHHHH--HTTCSEEEEESSCTTSC--TTCC---SCCHHHHHHHHHCS--SCEEEECS
T ss_pred HHHHHhCCCCeEEEEecCC-HHHHHHhh--ccCCCEEEEeccCCCcc--cccc---ccchhHHHHHHhCC--CCEEEECC
Confidence 9988888999998888775 69999999 789999999999987 6 5777 79999999999998 99999997
Q ss_pred Cc
Q 021587 268 GK 269 (310)
Q Consensus 268 ~k 269 (310)
+.
T Consensus 150 ~~ 151 (268)
T 3ab8_A 150 EP 151 (268)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 16
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=99.83 E-value=4e-20 Score=171.28 Aligned_cols=141 Identities=16% Similarity=0.244 Sum_probs=112.0
Q ss_pred CCCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 021587 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (310)
Q Consensus 109 ~~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~ 188 (310)
.+++||||+|+|+.+..|++||+.+|+..+++|++|||+++.. ..+..+. ... .+.+..++.+++.|+++
T Consensus 18 ~~~~ILv~~D~s~~s~~al~~A~~lA~~~~a~l~ll~v~~~~~-~~~~~~~-----~~~----~~~~~~~~~~~~~l~~~ 87 (309)
T 3cis_A 18 SSLGIIVGIDDSPAAQVAVRWAARDAELRKIPLTLVHAVSPEV-ATWLEVP-----LPP----GVLRWQQDHGRHLIDDA 87 (309)
T ss_dssp CTTEEEEECCSSHHHHHHHHHHHHHHHHHTCCEEEEEECCCCC-CCTTCCC-----CCH----HHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcc-cccccCC-----CCc----hhhHHHHHHHHHHHHHH
Confidence 5689999999999999999999999998899999999997431 1111111 111 22334456667777777
Q ss_pred HHHhhcC-----CCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEE
Q 021587 189 LDTCSQS-----KVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIK 263 (310)
Q Consensus 189 ~~~~~~~-----gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVl 263 (310)
.+.+... |++++..+..| +++++|+++|+ ++||||||++|++. ++++ ++||++.+|+++++ |||+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~g-~~~~~I~~~a~--~~DliV~G~~g~~~--~~~~---~~Gs~~~~vl~~~~--~PVl 157 (309)
T 3cis_A 88 LKVVEQASLRAGPPTVHSEIVPA-AAVPTLVDMSK--DAVLMVVGCLGSGR--WPGR---LLGSVSSGLLRHAH--CPVV 157 (309)
T ss_dssp HHHHHHHCSSSCCSCEEEEEESS-CHHHHHHHHGG--GEEEEEEESSCTTC--CTTC---CSCHHHHHHHHHCS--SCEE
T ss_pred HHHHHHhcccCCCceEEEEEecC-CHHHHHHHHhc--CCCEEEECCCCCcc--cccc---ccCcHHHHHHHhCC--CCEE
Confidence 7777654 88999888776 46999999997 89999999999876 5777 79999999999998 9999
Q ss_pred EEcCCc
Q 021587 264 VVCEGK 269 (310)
Q Consensus 264 VV~~~k 269 (310)
||+...
T Consensus 158 vv~~~~ 163 (309)
T 3cis_A 158 IIHDED 163 (309)
T ss_dssp EECTTC
T ss_pred EEcCCc
Confidence 999764
No 17
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=99.83 E-value=1.3e-20 Score=173.16 Aligned_cols=142 Identities=11% Similarity=0.178 Sum_probs=115.9
Q ss_pred CCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 021587 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFL 189 (310)
Q Consensus 110 ~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~~ 189 (310)
+++||||+|+|+.+..|++||+++|+..+++|++|||+++........+ ... ..+.+..++.+++.|+++.
T Consensus 22 ~~~ILv~vD~s~~s~~al~~A~~lA~~~~a~l~ll~v~~~~~~~~~~~~------~~~---~~~~~~~~~~~~~~l~~~~ 92 (294)
T 3loq_A 22 SNAMLLPTDLSENSFKVLEYLGDFKKVGVEEIGVLFVINLTKLSTVSGG------IDI---DHYIDEMSEKAEEVLPEVA 92 (294)
T ss_dssp TCEEEEECCSCTGGGGGGGGHHHHHHTTCCEEEEECCEECTTC-----C------CCT---THHHHHHHHHHHHHHHHHH
T ss_pred hccEEEecCCCHHHHHHHHHHHHHHhhcCCEEEEEEEecCccccccccc------ccH---HHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999986532111011 011 2334556678888999999
Q ss_pred HHhhcCCCcEEE-EEE-EcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEEEcC
Q 021587 190 DTCSQSKVMVDT-VLI-ESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKVVCE 267 (310)
Q Consensus 190 ~~~~~~gV~ve~-~vv-eG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV~~ 267 (310)
+.+...|++++. .+. .|+ ++++| ++++.++||||||++|++. ++++ ++||++.+|+++++ |||+||+.
T Consensus 93 ~~~~~~g~~~~~~~v~~~g~-~~~~I--~a~~~~~DliV~G~~g~~~--~~~~---~~Gs~~~~vl~~~~--~PVlvv~~ 162 (294)
T 3loq_A 93 QKIEAAGIKAEVIKPFPAGD-PVVEI--IKASENYSFIAMGSRGASK--FKKI---LLGSVSEGVLHDSK--VPVYIFKH 162 (294)
T ss_dssp HHHHHTTCEEEECSSCCEEC-HHHHH--HHHHTTSSEEEEECCCCCH--HHHH---HHCCHHHHHHHHCS--SCEEEECC
T ss_pred HHHHHcCCCcceeEeeccCC-hhHhe--eeccCCCCEEEEcCCCCcc--ccce---eeccHHHHHHhcCC--CCEEEecC
Confidence 988888999997 666 665 68999 9999999999999999987 6777 68999999999998 99999998
Q ss_pred Ccc
Q 021587 268 GKE 270 (310)
Q Consensus 268 ~k~ 270 (310)
+..
T Consensus 163 ~~~ 165 (294)
T 3loq_A 163 DMV 165 (294)
T ss_dssp CTT
T ss_pred ccc
Confidence 753
No 18
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=99.82 E-value=7e-20 Score=168.17 Aligned_cols=138 Identities=16% Similarity=0.139 Sum_probs=105.9
Q ss_pred CCCEEEEeecCCHH-------HHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHH
Q 021587 109 EEDIIYVAVGKSQS-------SMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKR 181 (310)
Q Consensus 109 ~~~kILVAVDgSe~-------S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a 181 (310)
.+++||||+|+|+. +.+|++||++++...+++|++|||+++.... .. . ++ . .+.++.+++.
T Consensus 133 ~~~~Ilva~D~s~~~~~~~~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~---~~-~------~~-~-~~~~~~~~~~ 200 (290)
T 3mt0_A 133 TGGKILAAVDVGNNDGEHRSLHAGIISHAYDIAGLAKATLHVISAHPSPMLS---SA-D------PT-F-QLSETIEARY 200 (290)
T ss_dssp TTCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEC-------------------C-H-HHHHHHHHHH
T ss_pred CCCeEEEEECCCCcchhhhHHHHHHHHHHHHHHHHcCCeEEEEEEecCcccc---cc-C------ch-h-HHHHHHHHHH
Confidence 57899999999998 9999999999999899999999999864310 00 0 11 1 2334445556
Q ss_pred HHHHHHHHHHhhcCCCc-EEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCc
Q 021587 182 RQLLQKFLDTCSQSKVM-VDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETC 260 (310)
Q Consensus 182 ~elL~~~~~~~~~~gV~-ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~C 260 (310)
++.|+++.+.. |+. ++..+..| +++++|+++|+++++||||||++|++. ++++ ++|||+.+|+++++ |
T Consensus 201 ~~~l~~~~~~~---g~~~~~~~v~~g-~~~~~I~~~a~~~~~dLiVmG~~g~~~--~~~~---~~Gsv~~~vl~~~~--~ 269 (290)
T 3mt0_A 201 REACRTFQAEY---GFSDEQLHIEEG-PADVLIPRTAQKLDAVVTVIGTVARTG--LSGA---LIGNTAEVVLDTLE--S 269 (290)
T ss_dssp HHHHHHHHHHH---TCCTTTEEEEES-CHHHHHHHHHHHHTCSEEEEECCSSCC--GGGC---CSCHHHHHHHTTCS--S
T ss_pred HHHHHHHHHHc---CCCcceEEEecc-CHHHHHHHHHHhcCCCEEEECCCCCcC--Ccce---ecchHHHHHHhcCC--C
Confidence 66666655443 553 45566666 579999999999999999999999987 6887 79999999999998 9
Q ss_pred eEEEEcCCc
Q 021587 261 EIKVVCEGK 269 (310)
Q Consensus 261 pVlVV~~~k 269 (310)
|||||++..
T Consensus 270 pVLvv~~~~ 278 (290)
T 3mt0_A 270 DVLVLKPDD 278 (290)
T ss_dssp EEEEECCHH
T ss_pred CEEEECCCC
Confidence 999998643
No 19
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=99.82 E-value=1.9e-20 Score=153.14 Aligned_cols=132 Identities=8% Similarity=0.043 Sum_probs=99.1
Q ss_pred CCCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEe-cC-CCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 021587 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVF-PQ-VKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQ 186 (310)
Q Consensus 109 ~~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi-~~-~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~ 186 (310)
.+++||||+|+|+.+.+|++||+++|...+++|++|||+ +. +.........++. .. .+.++.++.+++.|+
T Consensus 3 ~~~~ILv~~D~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~~~l~ 75 (138)
T 1q77_A 3 AMKVLLVLTDAYSDCEKAITYAVNFSEKLGAELDILAVLEDVYNLERANVTFGLPF---PP----EIKEESKKRIERRLR 75 (138)
T ss_dssp CCEEEEEEESTTCCCHHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHHHHCCCC---CT----HHHHHHHHHHHHHHH
T ss_pred cccEEEEEccCCHhHHHHHHHHHHHHHHcCCeEEEEEEecccccccccccccCCCC---Ch----HHHHHHHHHHHHHHH
Confidence 368999999999999999999999999999999999999 63 1000000001110 11 233445566777777
Q ss_pred HHHHH--hhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEE
Q 021587 187 KFLDT--CSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKV 264 (310)
Q Consensus 187 ~~~~~--~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlV 264 (310)
++ +. +...| +++..+..| +++++|+++|+++++||||||+||+ |++.+|+++++ |||+|
T Consensus 76 ~~-~~~~~~~~~-~~~~~~~~g-~~~~~I~~~a~~~~~dliV~G~~g~--------------sv~~~vl~~a~--~PVlv 136 (138)
T 1q77_A 76 EV-WEKLTGSTE-IPGVEYRIG-PLSEEVKKFVEGKGYELVVWACYPS--------------AYLCKVIDGLN--LASLI 136 (138)
T ss_dssp HH-HHHHHSCCC-CCCEEEECS-CHHHHHHHHHTTSCCSEEEECSCCG--------------GGTHHHHHHSS--SEEEE
T ss_pred HH-HHHhhccCC-cceEEEEcC-CHHHHHHHHHHhcCCCEEEEeCCCC--------------chHHHHHHhCC--CceEe
Confidence 77 66 35556 777777766 5799999999999999999999865 35889999998 99999
Q ss_pred Ec
Q 021587 265 VC 266 (310)
Q Consensus 265 V~ 266 (310)
|+
T Consensus 137 v~ 138 (138)
T 1q77_A 137 VK 138 (138)
T ss_dssp CC
T ss_pred eC
Confidence 86
No 20
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=99.80 E-value=5e-19 Score=163.88 Aligned_cols=136 Identities=16% Similarity=0.218 Sum_probs=105.2
Q ss_pred CCCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 021587 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (310)
Q Consensus 109 ~~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~ 188 (310)
..++||||+|+|+.+.+|++||++++...+++|++|||+++.... + .+. . ..+. ..+++++.|+++
T Consensus 170 ~~~~Ilv~~D~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~----~-~~~--~---~~~~----~~~~~~~~l~~~ 235 (309)
T 3cis_A 170 QQAPVLVGVDGSSASELATAIAFDEASRRNVDLVALHAWSDVDVS----E-WPG--I---DWPA----TQSMAEQVLAER 235 (309)
T ss_dssp CCCCEEEECCSSHHHHHHHHHHHHHHHHTTCCEEEEEESCSSCCT----T-CSS--C---CHHH----HHHHHHHHHHHH
T ss_pred CCCeEEEEeCCChHHHHHHHHHHHHHHhcCCEEEEEEEeeccccc----C-CCc--c---cHHH----HHHHHHHHHHHH
Confidence 468999999999999999999999999889999999998754211 1 110 1 1122 233444555555
Q ss_pred HHHhhc--CCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEEEc
Q 021587 189 LDTCSQ--SKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKVVC 266 (310)
Q Consensus 189 ~~~~~~--~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV~ 266 (310)
.+.+.. .++.++..+..| +++++|+++|+ ++||||||++|++. ++++ ++||++.+|+++++ |||+||+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~g-~~~~~I~~~a~--~adliV~G~~~~~~--~~~~---l~Gsv~~~vl~~~~--~pVlvv~ 305 (309)
T 3cis_A 236 LAGWQERYPNVAITRVVVRD-QPARQLVQRSE--EAQLVVVGSRGRGG--YAGM---LVGSVGETVAQLAR--TPVIVAR 305 (309)
T ss_dssp HTTHHHHCTTSCEEEEEESS-CHHHHHHHHHT--TCSEEEEESSCSSC--CTTC---SSCHHHHHHHHHCS--SCEEEEC
T ss_pred HHHHHhhCCCCcEEEEEEcC-CHHHHHHHhhC--CCCEEEECCCCCCC--cccc---ccCcHHHHHHhcCC--CCEEEeC
Confidence 544433 478888887776 57999999998 89999999999977 6887 79999999999998 9999998
Q ss_pred CC
Q 021587 267 EG 268 (310)
Q Consensus 267 ~~ 268 (310)
..
T Consensus 306 ~~ 307 (309)
T 3cis_A 306 ES 307 (309)
T ss_dssp C-
T ss_pred CC
Confidence 63
No 21
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=99.80 E-value=1.1e-19 Score=166.93 Aligned_cols=125 Identities=14% Similarity=0.085 Sum_probs=104.7
Q ss_pred CCCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 021587 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (310)
Q Consensus 109 ~~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~ 188 (310)
.+++||||+|+|+.+..|++||+.+|...+++|++|||.++. .+++.|+++
T Consensus 6 ~~~~ILv~~D~s~~s~~al~~A~~la~~~~a~l~ll~v~~~~-----------------------------~~~~~l~~~ 56 (290)
T 3mt0_A 6 AIRSILVVIEPDQLEGLALKRAQLIAGVTQSHLHLLVCEKRR-----------------------------DHSAALNDL 56 (290)
T ss_dssp TCCEEEEECCSSCSCCHHHHHHHHHHHHHCCEEEEEEECSSS-----------------------------CCHHHHHHH
T ss_pred hhceEEEEeCCCccchHHHHHHHHHHHhcCCeEEEEEeeCcH-----------------------------HHHHHHHHH
Confidence 368999999999999999999999999999999999998630 112233344
Q ss_pred HHHhhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEEEcCC
Q 021587 189 LDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKVVCEG 268 (310)
Q Consensus 189 ~~~~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV~~~ 268 (310)
.+.+...|+.++..+..++.+.++|+++|++.++||||||++|++. ++++ ++|+++.+|+++++ ||||||+.+
T Consensus 57 ~~~~~~~~~~~~~~~~~~g~~~~~i~~~a~~~~~dliV~G~~~~~~--~~~~---~~gs~~~~vl~~~~--~PVlvv~~~ 129 (290)
T 3mt0_A 57 AQELREEGYSVSTNQAWKDSLHQTIIAEQQAEGCGLIIKQHFPDNP--LKKA---ILTPDDWKLLRFAP--CPVLMTKTA 129 (290)
T ss_dssp HHHHHHTTCCEEEEEECSSSHHHHHHHHHHHHTCSEEEEECCCSCT--TSTT---SCCHHHHHHHHHCS--SCEEEECCC
T ss_pred HHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhcCCCEEEEecccCCc--hhhc---ccCHHHHHHHhcCC--CCEEEecCC
Confidence 4444567899998888666789999999999999999999999976 5777 79999999999998 999999954
Q ss_pred c
Q 021587 269 K 269 (310)
Q Consensus 269 k 269 (310)
.
T Consensus 130 ~ 130 (290)
T 3mt0_A 130 R 130 (290)
T ss_dssp S
T ss_pred C
Confidence 3
No 22
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=99.79 E-value=3.1e-19 Score=164.93 Aligned_cols=143 Identities=15% Similarity=0.182 Sum_probs=110.0
Q ss_pred CCCEEEEeecCCH-------HHHHHHHHHHHHhcCC--CCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHH
Q 021587 109 EEDIIYVAVGKSQ-------SSMDALSWTLRHAVNP--STLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETG 179 (310)
Q Consensus 109 ~~~kILVAVDgSe-------~S~~AL~wAl~lA~~~--ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e 179 (310)
.+++||||+|+|+ .+.+|++||+.++... +++|+||||+++..... ....+ ....+.+.++.++
T Consensus 155 ~~~~Ilva~D~s~~~~~~~~~s~~al~~a~~la~~~~~~a~l~ll~v~~~~~~~~--~~~~~-----~~~~~~~~~~~~~ 227 (319)
T 3olq_A 155 EYGTIVVAANLSNEESYHDALNLKLIELTNDLSHRIQKDPDVHLLSAYPVAPINI--AIELP-----DFDPNLYNNALRG 227 (319)
T ss_dssp TTCEEEEECCCSCCSTHHHHHHHHHHHHHHHHHHHHCSSCCEEEEEEECCCSCSC--CTTCT-----TCCHHHHHHHHHH
T ss_pred cCCeEEEEECCCCcchhHHHHHHHHHHHHHHHHHhccCCCeEEEEEeecCcchhh--hccCC-----cccHHHHHHHHHH
Confidence 5789999999998 6899999999999877 99999999998653210 01111 1123345555666
Q ss_pred HHHHHHHHHHHHhhcCCC-cEEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCC
Q 021587 180 KRRQLLQKFLDTCSQSKV-MVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPE 258 (310)
Q Consensus 180 ~a~elL~~~~~~~~~~gV-~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~ 258 (310)
.+++.|+.+.+. .++ .++.++..| .++++|+++|+++++||||||++|++. ++++ ++|||+.+|+++++
T Consensus 228 ~~~~~l~~~~~~---~~~~~~~~~v~~g-~~~~~I~~~a~~~~~dLiV~G~~g~~~--~~~~---~~Gsv~~~vl~~~~- 297 (319)
T 3olq_A 228 QHLIAMKELRQK---FSIPEEKTHVKEG-LPEQVIPQVCEELNAGIVVLGILGRTG--LSAA---FLGNTAEQLIDHIK- 297 (319)
T ss_dssp HHHHHHHHHHHH---TTCCGGGEEEEES-CHHHHHHHHHHHTTEEEEEEECCSCCS--THHH---HHHHHHHHHHTTCC-
T ss_pred HHHHHHHHHHHH---hCCCcccEEEecC-CcHHHHHHHHHHhCCCEEEEeccCccC--Cccc---cccHHHHHHHhhCC-
Confidence 667777666544 344 344556666 469999999999999999999999987 6777 78999999999998
Q ss_pred CceEEEEcCCc
Q 021587 259 TCEIKVVCEGK 269 (310)
Q Consensus 259 ~CpVlVV~~~k 269 (310)
||||||+...
T Consensus 298 -~pVLvv~~~~ 307 (319)
T 3olq_A 298 -CDLLAIKPDG 307 (319)
T ss_dssp -SEEEEECCTT
T ss_pred -CCEEEECCCC
Confidence 9999998754
No 23
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=99.79 E-value=6.1e-19 Score=161.92 Aligned_cols=125 Identities=16% Similarity=0.169 Sum_probs=105.4
Q ss_pred CCCCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 021587 108 QEEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQK 187 (310)
Q Consensus 108 ~~~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~ 187 (310)
..+++||||+|+|+.+.+|++||+.++...+++|++|||+++.. .++.+++
T Consensus 168 ~~~~~Ilv~~d~s~~s~~al~~a~~la~~~~~~l~ll~v~~~~~-----------------------------~~~~l~~ 218 (294)
T 3loq_A 168 SLFDRVLVAYDFSKWADRALEYAKFVVKKTGGELHIIHVSEDGD-----------------------------KTADLRV 218 (294)
T ss_dssp CTTSEEEEECCSSHHHHHHHHHHHHHHHHHTCEEEEEEECSSSC-----------------------------CHHHHHH
T ss_pred ccCCEEEEEECCCHHHHHHHHHHHHHhhhcCCEEEEEEEccCch-----------------------------HHHHHHH
Confidence 46789999999999999999999999988899999999986521 1123334
Q ss_pred HHHHhhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEEEcC
Q 021587 188 FLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKVVCE 267 (310)
Q Consensus 188 ~~~~~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV~~ 267 (310)
+.+.+...+++++..+..| +++++|+++|++.++||||||++|++. ++++ ++||++.+|+++++ ||||||++
T Consensus 219 ~~~~l~~~~~~~~~~~~~g-~~~~~I~~~a~~~~~dLlV~G~~~~~~--~~~~---~~Gs~~~~vl~~~~--~pvLvv~~ 290 (294)
T 3loq_A 219 MEEVIGAEGIEVHVHIESG-TPHKAILAKREEINATTIFMGSRGAGS--VMTM---ILGSTSESVIRRSP--VPVFVCKR 290 (294)
T ss_dssp HHHHHHHTTCCEEEEEECS-CHHHHHHHHHHHTTCSEEEEECCCCSC--HHHH---HHHCHHHHHHHHCS--SCEEEECS
T ss_pred HHHHHHHcCCcEEEEEecC-CHHHHHHHHHHhcCcCEEEEeCCCCCC--ccce---eeCcHHHHHHhcCC--CCEEEECC
Confidence 4444555688888877776 679999999999999999999999987 6887 78999999999998 99999997
Q ss_pred Cc
Q 021587 268 GK 269 (310)
Q Consensus 268 ~k 269 (310)
+.
T Consensus 291 ~~ 292 (294)
T 3loq_A 291 GD 292 (294)
T ss_dssp CT
T ss_pred CC
Confidence 64
No 24
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=99.71 E-value=5.1e-17 Score=146.72 Aligned_cols=116 Identities=14% Similarity=0.095 Sum_probs=95.8
Q ss_pred CCCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 021587 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (310)
Q Consensus 109 ~~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~ 188 (310)
.+++||||+|+|+.+.+|+++|.+++...+++|++|||+++. +..++.++++
T Consensus 153 ~~~~ilv~~d~s~~~~~al~~a~~la~~~~a~l~ll~v~~~~----------------------------~~~~~~l~~~ 204 (268)
T 3ab8_A 153 ELEGALLGYDASESAVRALHALAPLARALGLGVRVVSVHEDP----------------------------ARAEAWALEA 204 (268)
T ss_dssp CCCEEEEECCSCHHHHHHHHHHHHHHHHHTCCEEEEEECSSH----------------------------HHHHHHHHHH
T ss_pred CCCEEEEEECCCHHHHHHHHHHHHhhhcCCCEEEEEEEcCcH----------------------------HHHHHHHHHH
Confidence 568999999999999999999999998889999999997531 0123344555
Q ss_pred HHHhhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEEEc
Q 021587 189 LDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKVVC 266 (310)
Q Consensus 189 ~~~~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV~ 266 (310)
.+.+...|++++..+..| +++++|++++++. ||||||+ ++ +++ ++||++.+|+++++ |||+||+
T Consensus 205 ~~~l~~~~~~~~~~~~~g-~~~~~i~~~a~~~--dliV~G~---~~---~~~---~~Gs~~~~vl~~~~--~pvlvv~ 268 (268)
T 3ab8_A 205 EAYLRDHGVEASALVLGG-DAADHLLRLQGPG--DLLALGA---PV---RRL---VFGSTAERVIRNAQ--GPVLTAR 268 (268)
T ss_dssp HHHHHHTTCCEEEEEECS-CHHHHHHHHCCTT--EEEEEEC---CC---SCC---SSCCHHHHHHHHCS--SCEEEEC
T ss_pred HHHHHHcCCceEEEEeCC-ChHHHHHHHHHhC--CEEEECC---cc---ccc---EeccHHHHHHhcCC--CCEEEeC
Confidence 555666789988877766 5799999999987 9999999 33 555 78999999999998 9999986
No 25
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=93.48 E-value=0.41 Score=46.92 Aligned_cols=97 Identities=14% Similarity=0.143 Sum_probs=65.0
Q ss_pred CCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 021587 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFL 189 (310)
Q Consensus 110 ~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~~ 189 (310)
.++|+||+.|...|..++.++.++....+.+++++||-... .| + ...+..+...
T Consensus 18 ~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~~~v~avhvdhgl------rg--------~------------~s~~~~~~v~ 71 (464)
T 3a2k_A 18 GAAVIVGVSGGPDSLALLHVFLSLRDEWKLQVIAAHVDHMF------RG--------R------------ESEEEMEFVK 71 (464)
T ss_dssp SSBEEEECCSSHHHHHHHHHHHHHHHTTTCBCEEEEEECTT------CT--------H------------HHHHHHHHHH
T ss_pred CCEEEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEEEEECCC------Cc--------c------------ccHHHHHHHH
Confidence 36899999999999999988887776678899999996421 00 1 1112223445
Q ss_pred HHhhcCCCcEEEEEEE--------cCCh--------HHHHHHHhccCCCCEEEECCCCC
Q 021587 190 DTCSQSKVMVDTVLIE--------SDLV--------AKAILDLIPVLNIRKLVVGTTKS 232 (310)
Q Consensus 190 ~~~~~~gV~ve~~vve--------G~~~--------aeaIve~A~e~~aDLIVMGSrG~ 232 (310)
+.|+..|+.....-+. +..+ ...+.++|++++++.|++|.|..
T Consensus 72 ~~~~~lgi~~~v~~~~~~~~~~~~~~~~e~~aR~~Ry~~l~~~a~~~g~~~IatgH~~d 130 (464)
T 3a2k_A 72 RFCVERRILCETAQIDVPAFQRSAGLGAQEAARICRYRFFAELMEKHQAGYVAVGHHGD 130 (464)
T ss_dssp HHHHHTTCEEEEEECCCHHHHTTTTCCSHHHHHHHHHHHHHHHHHTTTCCEEECCCCHH
T ss_pred HHHHHcCCcEEEEEechhhhhhccCCCHHHHHHHHHHHHHHHHHHHcCcCEEEEeCChH
Confidence 5666677766543332 1111 13556788899999999999854
No 26
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=92.95 E-value=0.75 Score=42.54 Aligned_cols=96 Identities=8% Similarity=-0.024 Sum_probs=60.2
Q ss_pred CCEEEEeecCCHHHHHHHHHHHHHhcCCCCE-EEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 021587 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTL-IFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (310)
Q Consensus 110 ~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~-L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~ 188 (310)
.++|+|++-|...|.-++.++.+.....+.+ ++++||-... .. ...+..+.+
T Consensus 24 ~~~vlva~SGG~DS~~Ll~ll~~~~~~~g~~~v~av~vd~g~---------------r~------------~s~~~~~~v 76 (317)
T 1wy5_A 24 ERRVLIAFSGGVDSVVLTDVLLKLKNYFSLKEVALAHFNHML---------------RE------------SAERDEEFC 76 (317)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHSTTTTTCSEEEEEEEECCS---------------ST------------HHHHHHHHH
T ss_pred CCEEEEEecchHHHHHHHHHHHHHHHHcCCCEEEEEEEECCC---------------Cc------------ccHHHHHHH
Confidence 4689999999999999888777665555667 9999996321 00 001112233
Q ss_pred HHHhhcCCCcEEEEEEE--------cCCh--------HHHHHHHhccCCCCEEEECCCCC
Q 021587 189 LDTCSQSKVMVDTVLIE--------SDLV--------AKAILDLIPVLNIRKLVVGTTKS 232 (310)
Q Consensus 189 ~~~~~~~gV~ve~~vve--------G~~~--------aeaIve~A~e~~aDLIVMGSrG~ 232 (310)
.+.|+..|+.....-+. +..+ ...+.++|++++++.|+.|.|..
T Consensus 77 ~~~a~~lgi~~~v~~~~~~~~~~~~~~~~e~~ar~~Ry~~l~~~a~~~g~~~i~~Gh~~d 136 (317)
T 1wy5_A 77 KEFAKERNMKIFVGKEDVRAFAKENRMSLEEAGRFLRYKFLKEILESEGFDCIATAHHLN 136 (317)
T ss_dssp HHHHHHHTCCEEEEECCHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHTTCSEEECCCCHH
T ss_pred HHHHHHcCCcEEEEEEechhhhccCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeCchh
Confidence 33455556765543321 1111 12456778899999999999854
No 27
>2iel_A Hypothetical protein TT0030; TT0030,thermus thermophilus, structural genomics, PSI, protein structure initiative; 1.60A {Thermus thermophilus} SCOP: c.26.2.4
Probab=87.55 E-value=1.4 Score=36.72 Aligned_cols=80 Identities=9% Similarity=-0.043 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcEE-EEEEEcCChHHHHHHHhccCC--CCEEEECCCCCCchhhhhcccCCCCcHHHHHH
Q 021587 177 ETGKRRQLLQKFLDTCSQSKVMVD-TVLIESDLVAKAILDLIPVLN--IRKLVVGTTKSSLRVLRKSKSGRISGMADHIL 253 (310)
Q Consensus 177 ~~e~a~elL~~~~~~~~~~gV~ve-~~vveG~~~aeaIve~A~e~~--aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl 253 (310)
.++.+++.|+.....++..|..++ ..+...+ |-.+|.+...+.+ +|-||+-+.-+.. .+| |--.++.+.=
T Consensus 52 a~~~A~~~l~~sl~aL~~~G~~a~~G~v~d~~-Pl~AL~~~v~~~~~~~deiIV~T~Ph~v---s~~---fh~DwasrAr 124 (138)
T 2iel_A 52 VRRRAEEEAAAAKRALEAQGIPVEEAKAGDIS-PLLAIEEELLAHPGAYQGIVLSTLPPGL---SRW---LRLDVHTQAE 124 (138)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCCSEEEEEESS-HHHHHHHHHHHSTTSCSEEEEEECCTTT---CHH---HHTTHHHHGG
T ss_pred HHHHHHHHHHHHHHHHHHcCCcccccccCCCC-hHHHHHHHHHhcCCCCceEEEEcCCchH---HHH---HhccHHHHHH
Confidence 455677778888888888899988 8888766 5899999999999 9999999987754 444 3345566665
Q ss_pred hhCCCCceEEEEc
Q 021587 254 QTAPETCEIKVVC 266 (310)
Q Consensus 254 ~~Ap~~CpVlVV~ 266 (310)
+ -. .||+-+-
T Consensus 125 ~-~g--vPVlhl~ 134 (138)
T 2iel_A 125 R-FG--LPVIHVI 134 (138)
T ss_dssp G-GS--SCEEEEE
T ss_pred h-cC--CCEEEEe
Confidence 5 43 7887654
No 28
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=85.62 E-value=3.8 Score=39.63 Aligned_cols=39 Identities=23% Similarity=0.207 Sum_probs=32.9
Q ss_pred CCEEEEeecCCHHHHHHHHHHHHHhcC-CCCEEEEEEEec
Q 021587 110 EDIIYVAVGKSQSSMDALSWTLRHAVN-PSTLIFLIHVFP 148 (310)
Q Consensus 110 ~~kILVAVDgSe~S~~AL~wAl~lA~~-~ga~L~LVHVi~ 148 (310)
.++|+||+-|...|..++.++.++... .+-+++++||-.
T Consensus 13 ~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~g~~v~avhvdh 52 (433)
T 1ni5_A 13 SRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHH 52 (433)
T ss_dssp CSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECC
T ss_pred CCEEEEEEcchHHHHHHHHHHHHHHHhcCCCeEEEEEEEC
Confidence 468999999999999999888776655 678999999963
No 29
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=79.21 E-value=3.7 Score=40.38 Aligned_cols=36 Identities=14% Similarity=0.145 Sum_probs=30.5
Q ss_pred CCCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEec
Q 021587 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (310)
Q Consensus 109 ~~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~ 148 (310)
..+||+|++-|...|--++.|+.+. +.+|+.+|+-.
T Consensus 9 ~~~KVvVA~SGGlDSSvll~~L~e~----G~eViavtvd~ 44 (455)
T 1k92_A 9 VGQRIGIAFSGGLDTSAALLWMRQK----GAVPYAYTANL 44 (455)
T ss_dssp TTSEEEEECCSSHHHHHHHHHHHHT----TCEEEEEEEEC
T ss_pred CCCeEEEEEcChHHHHHHHHHHHHc----CCEEEEEEEEc
Confidence 3479999999999999999998662 78999999964
No 30
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=77.74 E-value=14 Score=31.09 Aligned_cols=35 Identities=17% Similarity=0.236 Sum_probs=28.3
Q ss_pred CCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEec
Q 021587 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (310)
Q Consensus 110 ~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~ 148 (310)
.++|+|++-|...|.-++.++.+. +.+|+.+|+..
T Consensus 3 ~~~v~v~lSGG~DS~~ll~ll~~~----~~~v~~~~~~~ 37 (219)
T 3bl5_A 3 KEKAIVVFSGGQDSTTCLLWALKE----FEEVETVTFHY 37 (219)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHH----CSEEEEEEEES
T ss_pred CCCEEEEccCcHHHHHHHHHHHHc----CCceEEEEEeC
Confidence 368999999999999888877654 36788899864
No 31
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2
Probab=75.44 E-value=5.5 Score=37.11 Aligned_cols=37 Identities=14% Similarity=-0.018 Sum_probs=30.0
Q ss_pred CEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEe
Q 021587 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVF 147 (310)
Q Consensus 111 ~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi 147 (310)
.+|+|++-|.+.|.-.|..+.+.+...+-.+.+||+-
T Consensus 47 ~~ivVa~SGGkDS~vLL~Ll~~~~~~~~~~i~vv~vD 83 (325)
T 1zun_A 47 DNPVMLYSIGKDSAVMLHLARKAFFPGKLPFPVMHVD 83 (325)
T ss_dssp SSEEEECCSSHHHHHHHHHHHHHHTTSCCSSCEEEEC
T ss_pred CCEEEEEcChHHHHHHHHHHHHhccccCCCEEEEEEE
Confidence 5799999999999999988877765445578888885
No 32
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=72.82 E-value=14 Score=33.44 Aligned_cols=81 Identities=16% Similarity=0.162 Sum_probs=50.4
Q ss_pred cCCHHHHHHHHHHHHHhcCCCC--EEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 021587 118 GKSQSSMDALSWTLRHAVNPST--LIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLDTCSQS 195 (310)
Q Consensus 118 DgSe~S~~AL~wAl~lA~~~ga--~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~~~~~~~~ 195 (310)
-.++.+.+||..|+++..+.+. +|++|.+=++ .+++.++++.. .
T Consensus 34 ~lnp~d~~ale~A~~Lke~~g~~~~V~av~~G~~------------------------------~~~~~lr~ala----~ 79 (264)
T 1o97_C 34 DLNEWDDFSLEEAMKIKESSDTDVEVVVVSVGPD------------------------------RVDESLRKCLA----K 79 (264)
T ss_dssp EECHHHHHHHHHHHHHHHHCSSCCEEEEEEESCG------------------------------GGHHHHHHHHH----T
T ss_pred ccCHHHHHHHHHHHHHHHhcCCCceEEEEEeCch------------------------------hHHHHHHHHHh----c
Confidence 3478999999999998765555 8888776321 01122333321 2
Q ss_pred CCcEEEEEEEcC--------ChHHHHHHHhccCCCCEEEECCCCCC
Q 021587 196 KVMVDTVLIESD--------LVAKAILDLIPVLNIRKLVVGTTKSS 233 (310)
Q Consensus 196 gV~ve~~vveG~--------~~aeaIve~A~e~~aDLIVMGSrG~g 233 (310)
|+.-- +++... ..+..|.+++++.++|+|++|....+
T Consensus 80 GaD~v-i~v~d~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~~s~d 124 (264)
T 1o97_C 80 GADRA-VRVWDDAAEGSDAIVVGRILTEVIKKEAPDMVFAGVQSSD 124 (264)
T ss_dssp TCSEE-EEECCGGGTTCCHHHHHHHHHHHHHHHCCSEEEEESCCTT
T ss_pred CCCEE-EEEcCcccccCCHHHHHHHHHHHHHhcCCCEEEEcCCccC
Confidence 44332 223211 24557788888889999999998643
No 33
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=71.27 E-value=11 Score=32.37 Aligned_cols=65 Identities=9% Similarity=0.151 Sum_probs=42.5
Q ss_pred HHHHHhhcCCCcEEEEEEEcCChHHHHHHH---hccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEE
Q 021587 187 KFLDTCSQSKVMVDTVLIESDLVAKAILDL---IPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIK 263 (310)
Q Consensus 187 ~~~~~~~~~gV~ve~~vveG~~~aeaIve~---A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVl 263 (310)
++...+++.|+.++..+.-....-+.+.++ +++.+++.||.|+-+.+. | +.-|....+ +||+
T Consensus 30 ~a~~~l~~~gi~~ev~V~saHR~p~~l~~~~~~a~~~g~~ViIa~AG~aah--L-----------pgvvA~~t~--~PVI 94 (173)
T 4grd_A 30 HAVAILQEFGVPYEAKVVSAHRMPDEMFDYAEKARERGLRAIIAGAGGAAH--L-----------PGMLAAKTT--VPVL 94 (173)
T ss_dssp HHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHTTTTCSEEEEEEESSCC--H-----------HHHHHHHCC--SCEE
T ss_pred HHHHHHHHcCCCEEEEEEccccCHHHHHHHHHHHHhcCCeEEEEecccccc--c-----------hhhheecCC--CCEE
Confidence 344445566899988777544334555554 555789999998877665 3 233455555 8999
Q ss_pred EEc
Q 021587 264 VVC 266 (310)
Q Consensus 264 VV~ 266 (310)
-||
T Consensus 95 gVP 97 (173)
T 4grd_A 95 GVP 97 (173)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
No 34
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=69.95 E-value=55 Score=29.16 Aligned_cols=80 Identities=11% Similarity=0.058 Sum_probs=49.8
Q ss_pred CCHHHHHHHHHHHHHhcCCCC--EEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 021587 119 KSQSSMDALSWTLRHAVNPST--LIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLDTCSQSK 196 (310)
Q Consensus 119 gSe~S~~AL~wAl~lA~~~ga--~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~~~~~~~~g 196 (310)
.++.+.+||..|+++..+ +. +|++|.+=++. +++.++++..+ |
T Consensus 35 lnp~d~~Ale~A~~Lke~-g~~~~V~av~~G~~~------------------------------a~~~lr~ala~----G 79 (252)
T 1efp_B 35 MNPFDEIAVEEAIRLKEK-GQAEEIIAVSIGVKQ------------------------------AAETLRTALAM----G 79 (252)
T ss_dssp ECHHHHHHHHHHHHHHTT-TSCSEEEEEEEESGG------------------------------GHHHHHHHHHH----T
T ss_pred CCHHHHHHHHHHHHHHhc-CCCceEEEEEeCChh------------------------------HHHHHHHHHhc----C
Confidence 478899999999998765 55 88888774310 11222333222 4
Q ss_pred CcEEEEEE-E-----cC---ChHHHHHHHhccCCCCEEEECCCCCC
Q 021587 197 VMVDTVLI-E-----SD---LVAKAILDLIPVLNIRKLVVGTTKSS 233 (310)
Q Consensus 197 V~ve~~vv-e-----G~---~~aeaIve~A~e~~aDLIVMGSrG~g 233 (310)
+.--.++- . +. ..+..|.+++++.++|+|++|....+
T Consensus 80 aD~vi~v~~d~~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~~s~d 125 (252)
T 1efp_B 80 ADRAILVVAADDVQQDIEPLAVAKILAAVARAEGTELIIAGKQAID 125 (252)
T ss_dssp CSEEEEEECCSSTTCCCCHHHHHHHHHHHHHHHTCSEEEEESCCTT
T ss_pred CCEEEEEecChhhcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccC
Confidence 43332222 1 11 24557778888888999999998653
No 35
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=69.13 E-value=48 Score=29.67 Aligned_cols=80 Identities=10% Similarity=0.032 Sum_probs=50.0
Q ss_pred CCHHHHHHHHHHHHHhcCCCC--EEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 021587 119 KSQSSMDALSWTLRHAVNPST--LIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLDTCSQSK 196 (310)
Q Consensus 119 gSe~S~~AL~wAl~lA~~~ga--~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~~~~~~~~g 196 (310)
.++.+..||..|+++..+ +. +|++|.+=++. +++.++++... |
T Consensus 38 lnp~d~~Ale~A~~Lke~-g~~~~V~av~~G~~~------------------------------a~~~lr~ala~----G 82 (255)
T 1efv_B 38 MNPFCEIAVEEAVRLKEK-KLVKEVIAVSCGPAQ------------------------------CQETIRTALAM----G 82 (255)
T ss_dssp ECHHHHHHHHHHHHHHHT-TSCSEEEEEEEESTT------------------------------HHHHHHHHHHH----T
T ss_pred CCHHHHHHHHHHHHHHhc-CCCceEEEEEeCChh------------------------------HHHHHHHHHhc----C
Confidence 478899999999998765 55 88888775321 12223333222 4
Q ss_pred CcEEEEEE-E-----cC---ChHHHHHHHhccCCCCEEEECCCCCC
Q 021587 197 VMVDTVLI-E-----SD---LVAKAILDLIPVLNIRKLVVGTTKSS 233 (310)
Q Consensus 197 V~ve~~vv-e-----G~---~~aeaIve~A~e~~aDLIVMGSrG~g 233 (310)
+.--.++- . +. ..+..|.+++++.++|+|++|....+
T Consensus 83 aD~vi~v~~d~~~~~~~~~~~~A~~La~~i~~~~~dlVl~G~~s~d 128 (255)
T 1efv_B 83 ADRGIHVEVPPAEAERLGPLQVARVLAKLAEKEKVDLVLLGKQAID 128 (255)
T ss_dssp CSEEEEEECCHHHHTTCCHHHHHHHHHHHHHHHTCSEEEEESCCTT
T ss_pred CCEEEEEecChhhcccCCHHHHHHHHHHHHHhcCCCEEEEeCcccC
Confidence 43332222 1 11 24557778888888999999998653
No 36
>2xry_A Deoxyribodipyrimidine photolyase; DNA damage, DNA repair; HET: FAD; 1.50A {Methanosarcina mazei} PDB: 2xrz_A*
Probab=68.93 E-value=18 Score=35.15 Aligned_cols=92 Identities=14% Similarity=0.079 Sum_probs=58.5
Q ss_pred cCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 021587 118 GKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLDTCSQSKV 197 (310)
Q Consensus 118 DgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~~~~~~~~gV 197 (310)
|.=-.-..||..|++.+...+..|+.|.++++... . . .... ..-..+-|..+.+.+++.|+
T Consensus 46 DLRl~DN~aL~~A~~~a~~~~~~v~~vfi~dp~~~-~--~--------~~~r--------~~Fl~~sL~~L~~~L~~~G~ 106 (482)
T 2xry_A 46 DQRAEDNWALLFSRAIAKEANVPVVVVFCLTDEFL-E--A--------GIRQ--------YEFMLKGLQELEVSLSRKKI 106 (482)
T ss_dssp CCCSSSCHHHHHHHHHHHHHTSCEEEEEEECTTGG-G--S--------CHHH--------HHHHHHHHHHHHHHHHHTTC
T ss_pred CCCccccHHHHHHHHHHHHcCCcEEEEEEeChhhh-c--c--------CHHH--------HHHHHHHHHHHHHHHHHcCC
Confidence 54344456777887766545678999999986421 0 0 1111 11223445555566666677
Q ss_pred cEEEEEEEcCChHHHHHHHhccCCCCEEEECCCC
Q 021587 198 MVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTK 231 (310)
Q Consensus 198 ~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG 231 (310)
.+. ++.|. +.+.|.+++++++++.|+.-...
T Consensus 107 ~L~--v~~g~-~~~~l~~l~~~~~~~~V~~~~~~ 137 (482)
T 2xry_A 107 PSF--FLRGD-PGEKISRFVKDYNAGTLVTDFSP 137 (482)
T ss_dssp CEE--EEESC-HHHHHHHHHHHTTCSEEEEECCC
T ss_pred cEE--EEeCC-HHHHHHHHHHHcCCCEEEEeccc
Confidence 654 45564 68999999999999999986543
No 37
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=68.14 E-value=14 Score=31.23 Aligned_cols=68 Identities=6% Similarity=0.022 Sum_probs=46.8
Q ss_pred HHHHHhhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEEEc
Q 021587 187 KFLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKVVC 266 (310)
Q Consensus 187 ~~~~~~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV~ 266 (310)
++...++..|+.++..+.--...-+.+.+++++...+.||.|+-+.+. + +.-|....+ +||+-||
T Consensus 17 ~a~~~l~~~gi~~dv~V~saHR~p~~~~~~~~~a~~~ViIa~AG~aa~--L-----------pgvva~~t~--~PVIgVP 81 (157)
T 2ywx_A 17 KAVNILKEFGVEFEVRVASAHRTPELVEEIVKNSKADVFIAIAGLAAH--L-----------PGVVASLTT--KPVIAVP 81 (157)
T ss_dssp HHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHCCCSEEEEEEESSCC--H-----------HHHHHTTCS--SCEEEEE
T ss_pred HHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHhcCCCEEEEEcCchhh--h-----------HHHHHhccC--CCEEEec
Confidence 444455566899888777554446888888886666889888876655 2 333555555 9999888
Q ss_pred CCc
Q 021587 267 EGK 269 (310)
Q Consensus 267 ~~k 269 (310)
-+.
T Consensus 82 ~~~ 84 (157)
T 2ywx_A 82 VDA 84 (157)
T ss_dssp ECS
T ss_pred CCC
Confidence 733
No 38
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=67.85 E-value=13 Score=31.75 Aligned_cols=34 Identities=9% Similarity=-0.129 Sum_probs=27.1
Q ss_pred CEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEec
Q 021587 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (310)
Q Consensus 111 ~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~ 148 (310)
++|+|++-|...|.-.|..+.+.. .++.++|+-.
T Consensus 45 ~~v~Va~SGGkDS~vLL~ll~~~~----~~v~~v~vd~ 78 (215)
T 1sur_A 45 GEYVLSSSFGIQAAVSLHLVNQIR----PDIPVILTDT 78 (215)
T ss_dssp SEEEEECCCCTTHHHHHHHHHHHS----TTCEEEEEEC
T ss_pred CCEEEEecCCHHHHHHHHHHHHhC----CCCeEEEeeC
Confidence 589999999999998887776553 4578888864
No 39
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1
Probab=67.57 E-value=24 Score=30.34 Aligned_cols=34 Identities=18% Similarity=0.025 Sum_probs=28.1
Q ss_pred CEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEec
Q 021587 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (310)
Q Consensus 111 ~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~ 148 (310)
++|+|++-|...|.-++.|+.+.. .+|+.||+..
T Consensus 3 ~kvvv~lSGG~DS~~~l~ll~~~~----~~v~av~~~~ 36 (232)
T 2pg3_A 3 KRAVVVFSGGQDSTTCLIQALQDY----DDVHCITFDY 36 (232)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHC----SEEEEEEEES
T ss_pred CCEEEEecCcHHHHHHHHHHHHcC----CCEEEEEEEC
Confidence 589999999999999998887643 5888888853
No 40
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=65.88 E-value=20 Score=31.04 Aligned_cols=67 Identities=6% Similarity=0.081 Sum_probs=43.7
Q ss_pred HHHHHhhcCCCcEEEEEEEcCChHHHHHHH---hccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEE
Q 021587 187 KFLDTCSQSKVMVDTVLIESDLVAKAILDL---IPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIK 263 (310)
Q Consensus 187 ~~~~~~~~~gV~ve~~vveG~~~aeaIve~---A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVl 263 (310)
++.+.+++.|+.++..++-...--+.+.++ +++.+++.||.|+-+... | +.-|....+ .||+
T Consensus 40 ~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~a~~~g~~ViIa~AG~aah--L-----------pGvvAa~T~--~PVI 104 (181)
T 4b4k_A 40 YACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAH--L-----------PGMVAAKTN--LPVI 104 (181)
T ss_dssp HHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEECSSCC--H-----------HHHHHTTCC--SCEE
T ss_pred HHHHHHHHcCCCeeEEEEccccChHHHHHHHHHHHhcCceEEEEecccccc--c-----------hhhHHhcCC--CCEE
Confidence 444455566899998877544334555555 456789999999876655 2 233444555 8999
Q ss_pred EEcCC
Q 021587 264 VVCEG 268 (310)
Q Consensus 264 VV~~~ 268 (310)
=||-.
T Consensus 105 GVPv~ 109 (181)
T 4b4k_A 105 GVPVQ 109 (181)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 99863
No 41
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=65.66 E-value=15 Score=35.49 Aligned_cols=35 Identities=9% Similarity=0.040 Sum_probs=29.3
Q ss_pred CCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEec
Q 021587 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (310)
Q Consensus 110 ~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~ 148 (310)
.++|+|++-|...|.-++.|+.+. +.+|+.+|+-.
T Consensus 5 ~~kVvvalSGGlDSsvll~lL~e~----G~eV~av~vd~ 39 (413)
T 2nz2_A 5 KGSVVLAYSGGLDTSCILVWLKEQ----GYDVIAYLANI 39 (413)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHHT----TEEEEEEEEES
T ss_pred CCeEEEEEcChHHHHHHHHHHHHc----CCEEEEEEEEC
Confidence 368999999999999999988653 67899999864
No 42
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=64.82 E-value=18 Score=31.01 Aligned_cols=67 Identities=6% Similarity=0.083 Sum_probs=43.6
Q ss_pred HHHHHhhcCCCcEEEEEEEcCChHHHHHHHhc---cCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEE
Q 021587 187 KFLDTCSQSKVMVDTVLIESDLVAKAILDLIP---VLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIK 263 (310)
Q Consensus 187 ~~~~~~~~~gV~ve~~vveG~~~aeaIve~A~---e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVl 263 (310)
++...++..|+.++..+.--...-+.+.++++ +.+++.||.|+-+.+. | +.-|....+ +||+
T Consensus 29 ~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~--L-----------pgvvA~~t~--~PVI 93 (170)
T 1xmp_A 29 YACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAH--L-----------PGMVAAKTN--LPVI 93 (170)
T ss_dssp HHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCC--H-----------HHHHHTTCC--SCEE
T ss_pred HHHHHHHHcCCCEEEEEEeccCCHHHHHHHHHHHHhCCCcEEEEECCchhh--h-----------HHHHHhccC--CCEE
Confidence 34444555689998877744333466666654 4568999888876665 3 333555555 9999
Q ss_pred EEcCC
Q 021587 264 VVCEG 268 (310)
Q Consensus 264 VV~~~ 268 (310)
-||-.
T Consensus 94 gVP~~ 98 (170)
T 1xmp_A 94 GVPVQ 98 (170)
T ss_dssp EEEEC
T ss_pred EeeCC
Confidence 88854
No 43
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=63.72 E-value=19 Score=30.97 Aligned_cols=66 Identities=8% Similarity=0.081 Sum_probs=43.3
Q ss_pred HHHHHhhcCCCcEEEEEEEcCChHHHHHHHh---ccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEE
Q 021587 187 KFLDTCSQSKVMVDTVLIESDLVAKAILDLI---PVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIK 263 (310)
Q Consensus 187 ~~~~~~~~~gV~ve~~vveG~~~aeaIve~A---~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVl 263 (310)
++...++..|+.++..+.--...-+.+.+++ ++.+++.||.|+-+.+. | +.-|....+ +||+
T Consensus 30 ~a~~~L~~~Gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~--L-----------pgvvA~~t~--~PVI 94 (174)
T 3kuu_A 30 FAADVLTTLNVPFHVEVVSAHRTPDRLFSFAEQAEANGLHVIIAGNGGAAH--L-----------PGMLAAKTL--VPVL 94 (174)
T ss_dssp HHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCSEEEEEEESSCC--H-----------HHHHHHTCS--SCEE
T ss_pred HHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEECChhhh--h-----------HHHHHhccC--CCEE
Confidence 4444555668999887775443346666554 45689999988876655 2 333555565 8999
Q ss_pred EEcC
Q 021587 264 VVCE 267 (310)
Q Consensus 264 VV~~ 267 (310)
=||-
T Consensus 95 gVP~ 98 (174)
T 3kuu_A 95 GVPV 98 (174)
T ss_dssp EEEE
T ss_pred EeeC
Confidence 8874
No 44
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=63.46 E-value=19 Score=31.20 Aligned_cols=67 Identities=7% Similarity=0.045 Sum_probs=44.0
Q ss_pred HHHHHhhcCCCcEEEEEEEcCChHHHHHHHhc---cCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEE
Q 021587 187 KFLDTCSQSKVMVDTVLIESDLVAKAILDLIP---VLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIK 263 (310)
Q Consensus 187 ~~~~~~~~~gV~ve~~vveG~~~aeaIve~A~---e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVl 263 (310)
++...++..|+.++..+.--...-+.+.++++ +.+++.||.|+-+.+. | +.-|....+ +||+
T Consensus 39 ~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~--L-----------pgvvA~~t~--~PVI 103 (182)
T 1u11_A 39 HADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGAAH--L-----------PGMCAAWTR--LPVL 103 (182)
T ss_dssp HHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEEESSCC--H-----------HHHHHHHCS--SCEE
T ss_pred HHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEecCchhh--h-----------HHHHHhccC--CCEE
Confidence 34444555689998877754433466666654 4568999888876655 2 333555666 8999
Q ss_pred EEcCC
Q 021587 264 VVCEG 268 (310)
Q Consensus 264 VV~~~ 268 (310)
-||-.
T Consensus 104 gVP~~ 108 (182)
T 1u11_A 104 GVPVE 108 (182)
T ss_dssp EEEEC
T ss_pred EeeCC
Confidence 88853
No 45
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=63.30 E-value=23 Score=30.22 Aligned_cols=67 Identities=7% Similarity=0.107 Sum_probs=44.0
Q ss_pred HHHHHhhcCCCcEEEEEEEcCChHHHHHHHhc---cCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEE
Q 021587 187 KFLDTCSQSKVMVDTVLIESDLVAKAILDLIP---VLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIK 263 (310)
Q Consensus 187 ~~~~~~~~~gV~ve~~vveG~~~aeaIve~A~---e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVl 263 (310)
++...++..|+.++..+.--..--+.+.++++ +.+++.||.|+-+.+. | +.-|....+ +||+
T Consensus 23 ~a~~~l~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~--L-----------pgvvA~~t~--~PVI 87 (166)
T 3oow_A 23 ECCDILDNLGIGYECEVVSAHRTPDKMFDYAETAKERGLKVIIAGAGGAAH--L-----------PGMVAAKTT--LPVL 87 (166)
T ss_dssp HHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEECSSCC--H-----------HHHHHHTCS--SCEE
T ss_pred HHHHHHHHcCCCEEEEEEcCcCCHHHHHHHHHHHHhCCCcEEEEECCcchh--h-----------HHHHHhccC--CCEE
Confidence 44445556688888777754433466666654 4578999999877665 2 334555665 9999
Q ss_pred EEcCC
Q 021587 264 VVCEG 268 (310)
Q Consensus 264 VV~~~ 268 (310)
=||-.
T Consensus 88 gVP~~ 92 (166)
T 3oow_A 88 GVPVK 92 (166)
T ss_dssp EEECC
T ss_pred EeecC
Confidence 88853
No 46
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=63.05 E-value=18 Score=30.96 Aligned_cols=67 Identities=7% Similarity=0.054 Sum_probs=44.0
Q ss_pred HHHHHhhcCCCcEEEEEEEcCChHHHHHHHh---ccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEE
Q 021587 187 KFLDTCSQSKVMVDTVLIESDLVAKAILDLI---PVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIK 263 (310)
Q Consensus 187 ~~~~~~~~~gV~ve~~vveG~~~aeaIve~A---~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVl 263 (310)
++...++..|+.++..+.--..--+.+.+++ ++.+++.||.|+-+.+. | +.-|....+ +||+
T Consensus 24 ~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~--L-----------pgvvA~~t~--~PVI 88 (169)
T 3trh_A 24 TAFTELKSLGIPFEAHILSAHRTPKETVEFVENADNRGCAVFIAAAGLAAH--L-----------AGTIAAHTL--KPVI 88 (169)
T ss_dssp HHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHHHTTEEEEEEEECSSCC--H-----------HHHHHHTCS--SCEE
T ss_pred HHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEECChhhh--h-----------HHHHHhcCC--CCEE
Confidence 4444555668999877775443345566554 45789999988876655 2 334555665 9999
Q ss_pred EEcCC
Q 021587 264 VVCEG 268 (310)
Q Consensus 264 VV~~~ 268 (310)
=||-.
T Consensus 89 gVP~~ 93 (169)
T 3trh_A 89 GVPMA 93 (169)
T ss_dssp EEECC
T ss_pred EeecC
Confidence 88854
No 47
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=62.86 E-value=50 Score=31.43 Aligned_cols=35 Identities=14% Similarity=0.105 Sum_probs=29.0
Q ss_pred CCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEec
Q 021587 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (310)
Q Consensus 110 ~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~ 148 (310)
.++|+|++-|...|.-|+.++.+ .+.+++.||+..
T Consensus 187 ~~kvlvalSGGvDS~vll~ll~~----~G~~v~av~v~~ 221 (413)
T 2c5s_A 187 GGKVMVLLSGGIDSPVAAYLTMK----RGVSVEAVHFHS 221 (413)
T ss_dssp TEEEEEECCSSSHHHHHHHHHHH----BTEEEEEEEEEC
T ss_pred CCeEEEEeCCCChHHHHHHHHHH----cCCcEEEEEEeC
Confidence 57899999999999988877754 378999999964
No 48
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=61.69 E-value=33 Score=32.38 Aligned_cols=35 Identities=9% Similarity=-0.075 Sum_probs=28.0
Q ss_pred CCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEec
Q 021587 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (310)
Q Consensus 110 ~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~ 148 (310)
.++|+|++-|...|.-++.++.+ .+-+|+.||+..
T Consensus 9 ~~kVlVa~SGGvDSsv~a~lL~~----~G~~V~~v~~~~ 43 (376)
T 2hma_A 9 KTRVVVGMSGGVDSSVTALLLKE----QGYDVIGIFMKN 43 (376)
T ss_dssp GSEEEEECCSSHHHHHHHHHHHH----TTCEEEEEEEEC
T ss_pred CCeEEEEEeCHHHHHHHHHHHHH----cCCcEEEEEEEC
Confidence 46899999999999888776654 367899999864
No 49
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=61.56 E-value=20 Score=31.37 Aligned_cols=86 Identities=10% Similarity=0.042 Sum_probs=55.4
Q ss_pred CEEEEeecC-----CHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH
Q 021587 111 DIIYVAVGK-----SQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLL 185 (310)
Q Consensus 111 ~kILVAVDg-----Se~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL 185 (310)
+.|||=++- .+.+.++|..|.+++...+.++++|-+=+... +.++
T Consensus 4 ~~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~---------------------------~~~~--- 53 (217)
T 3ih5_A 4 NNLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLK---------------------------EIEK--- 53 (217)
T ss_dssp CCEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCT---------------------------TTHH---
T ss_pred ccEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHH---------------------------HHHH---
Confidence 468887763 68899999999999877778888876643210 0011
Q ss_pred HHHHHHhhcCCCcEEEEEEEcC--------ChHHHHHHHhccCCCCEEEECCCCC
Q 021587 186 QKFLDTCSQSKVMVDTVLIESD--------LVAKAILDLIPVLNIRKLVVGTTKS 232 (310)
Q Consensus 186 ~~~~~~~~~~gV~ve~~vveG~--------~~aeaIve~A~e~~aDLIVMGSrG~ 232 (310)
+ +...|+.-- +++... ..++.|.++++++++|+|++|....
T Consensus 54 -~----~~~~Gad~v-~~v~~~~~~~~~~~~~a~~l~~~i~~~~p~~Vl~g~t~~ 102 (217)
T 3ih5_A 54 -Q----ILPYGVDKL-HVFDAEGLYPYTSLPHTSILVNLFKEEQPQICLMGATVI 102 (217)
T ss_dssp -H----HGGGTCSEE-EEEECGGGSSCCHHHHHHHHHHHHHHHCCSEEEEECSHH
T ss_pred -H----HHhcCCCEE-EEecCcccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcc
Confidence 1 112344322 233221 2466888999999999999998644
No 50
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A*
Probab=60.75 E-value=18 Score=34.69 Aligned_cols=35 Identities=11% Similarity=0.022 Sum_probs=29.3
Q ss_pred CEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEec
Q 021587 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (310)
Q Consensus 111 ~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~ 148 (310)
+||+|++-|...|--++.|+.+.. +.+|+.+|+-.
T Consensus 1 ~kVvva~SGG~DSsvll~ll~~~~---g~~V~av~vd~ 35 (400)
T 1kor_A 1 MKIVLAYSGGLDTSIILKWLKETY---RAEVIAFTADI 35 (400)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHH---TCEEEEEEEES
T ss_pred CcEEEEEeChHHHHHHHHHHHHhh---CCcEEEEEEeC
Confidence 479999999999999999987653 56899999863
No 51
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=60.30 E-value=24 Score=29.97 Aligned_cols=66 Identities=8% Similarity=0.080 Sum_probs=43.0
Q ss_pred HHHHHhhcCCCcEEEEEEEcCChHHHHHHHh---ccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEE
Q 021587 187 KFLDTCSQSKVMVDTVLIESDLVAKAILDLI---PVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIK 263 (310)
Q Consensus 187 ~~~~~~~~~gV~ve~~vveG~~~aeaIve~A---~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVl 263 (310)
++...++..|+.++..+.--...-+.+.+++ ++.+++.||.|+-+.+. | +.-|....+ +||+
T Consensus 21 ~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~--L-----------pgvvA~~t~--~PVI 85 (163)
T 3ors_A 21 ESCNMLDYFEIPYEKQVVSAHRTPKMMVQFASEARERGINIIIAGAGGAAH--L-----------PGMVASLTT--LPVI 85 (163)
T ss_dssp HHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCC--H-----------HHHHHHHCS--SCEE
T ss_pred HHHHHHHHcCCCEEEEEECCcCCHHHHHHHHHHHHhCCCcEEEEECCchhh--h-----------HHHHHhccC--CCEE
Confidence 4444555668998887775443345655554 45678999988876655 2 333555666 8999
Q ss_pred EEcC
Q 021587 264 VVCE 267 (310)
Q Consensus 264 VV~~ 267 (310)
=||-
T Consensus 86 gVP~ 89 (163)
T 3ors_A 86 GVPI 89 (163)
T ss_dssp EEEE
T ss_pred EeeC
Confidence 8874
No 52
>3umv_A Deoxyribodipyrimidine photo-lyase; CPD cyclobutane pyrimidine dimers, UV damaged DNA, DNA repai flavoprotein; HET: FAD; 1.71A {Oryza sativa japonica group}
Probab=59.78 E-value=21 Score=35.32 Aligned_cols=95 Identities=14% Similarity=0.085 Sum_probs=58.0
Q ss_pred EEEEee--cCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 021587 112 IIYVAV--GKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFL 189 (310)
Q Consensus 112 kILVAV--DgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~~ 189 (310)
.+||=. |.--+-..||..|++.+...+..|+.|.|+++....+ + ..... ..=..+-|..+.
T Consensus 39 ~vlvWFRrDLRl~DN~AL~~A~~~a~~~~~pVl~vfildp~~~~~---~------~~~~r--------~~FL~~sL~dL~ 101 (506)
T 3umv_A 39 PVVYWMLRDQRLADNWALLHAAGLAAASASPLAVAFALFPRPFLL---S------ARRRQ--------LGFLLRGLRRLA 101 (506)
T ss_dssp CEEEEESSCCCSTTCHHHHHHHHHHHHHTCCEEEEEECCCTTCGG---G------CCHHH--------HHHHHHHHHHHH
T ss_pred EEEEEeCCCcchhhcHHHHHHHHhhhhcCCCEEEEEeccchhhcc---C------CCHHH--------HHHHHHHHHHHH
Confidence 344433 5544455688888887755567899999998752111 0 11111 112233444555
Q ss_pred HHhhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEE
Q 021587 190 DTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVV 227 (310)
Q Consensus 190 ~~~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVM 227 (310)
+.+++.|+.. +++.|++ .+. .+++++++|+.|+.
T Consensus 102 ~~L~~lG~~L--~v~~G~p-~~v-~~L~~~~~a~~V~~ 135 (506)
T 3umv_A 102 ADAAARHLPF--FLFTGGP-AEI-PALVQRLGASTLVA 135 (506)
T ss_dssp HHHHHTTCCE--EEESSCT-THH-HHHHHHTTCSEEEE
T ss_pred HHHHHcCCce--EEEecCh-HHH-HHHHHhcCCCEEEe
Confidence 5555556554 4566765 677 99999999999997
No 53
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=59.27 E-value=28 Score=29.45 Aligned_cols=66 Identities=8% Similarity=0.021 Sum_probs=43.4
Q ss_pred HHHHHhhcCCCcEEEEEEEcCChHHHHHHHhc---cC-CCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceE
Q 021587 187 KFLDTCSQSKVMVDTVLIESDLVAKAILDLIP---VL-NIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEI 262 (310)
Q Consensus 187 ~~~~~~~~~gV~ve~~vveG~~~aeaIve~A~---e~-~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpV 262 (310)
++...++..|+.++..+.--...-+.+.++++ +. +++.||.|+-+.+. | +.-|....+ +||
T Consensus 20 ~a~~~l~~~gi~~ev~V~saHR~p~~~~~~~~~a~~~~~~~ViIa~AG~aa~--L-----------pgvvA~~t~--~PV 84 (159)
T 3rg8_A 20 KIASELKTFGIEYAIRIGSAHKTAEHVVSMLKEYEALDRPKLYITIAGRSNA--L-----------SGFVDGFVK--GAT 84 (159)
T ss_dssp HHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHHHTSCSCEEEEEECCSSCC--H-----------HHHHHHHSS--SCE
T ss_pred HHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHhhhcCCCcEEEEECCchhh--h-----------HHHHHhccC--CCE
Confidence 44445556688888777754433466666654 33 68999999877665 2 333555666 999
Q ss_pred EEEcC
Q 021587 263 KVVCE 267 (310)
Q Consensus 263 lVV~~ 267 (310)
+=||-
T Consensus 85 IgVP~ 89 (159)
T 3rg8_A 85 IACPP 89 (159)
T ss_dssp EECCC
T ss_pred EEeeC
Confidence 98884
No 54
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=59.22 E-value=25 Score=30.41 Aligned_cols=68 Identities=6% Similarity=0.084 Sum_probs=43.5
Q ss_pred HHHHHhhcCCCcEEEEEEEcCChHHHHHHH---hccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEE
Q 021587 187 KFLDTCSQSKVMVDTVLIESDLVAKAILDL---IPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIK 263 (310)
Q Consensus 187 ~~~~~~~~~gV~ve~~vveG~~~aeaIve~---A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVl 263 (310)
++...++..|+.++..+.--...-+.+.++ +++.+++.||.|+-+.+. | +.-|....+ +||+
T Consensus 31 ~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~--L-----------pgvvA~~t~--~PVI 95 (183)
T 1o4v_A 31 QAAEILEEFGIDYEITIVSAHRTPDRMFEYAKNAEERGIEVIIAGAGGAAH--L-----------PGMVASITH--LPVI 95 (183)
T ss_dssp HHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEEESSCC--H-----------HHHHHHHCS--SCEE
T ss_pred HHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEecCcccc--c-----------HHHHHhccC--CCEE
Confidence 344445556899888777443334555555 445678999988876665 2 333555666 8999
Q ss_pred EEcCCc
Q 021587 264 VVCEGK 269 (310)
Q Consensus 264 VV~~~k 269 (310)
-||-..
T Consensus 96 gVP~~~ 101 (183)
T 1o4v_A 96 GVPVKT 101 (183)
T ss_dssp EEEECC
T ss_pred EeeCCC
Confidence 888543
No 55
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=58.80 E-value=33 Score=33.60 Aligned_cols=34 Identities=15% Similarity=0.027 Sum_probs=28.5
Q ss_pred CEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEec
Q 021587 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (310)
Q Consensus 111 ~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~ 148 (310)
++|+|++-|...|.-++.++.+. +.+++.||+-.
T Consensus 210 ~kvvvalSGGvDSsvla~ll~~~----g~~v~av~vd~ 243 (503)
T 2ywb_A 210 DRVLLAVSGGVDSSTLALLLAKA----GVDHLAVFVDH 243 (503)
T ss_dssp SEEEEEECSSHHHHHHHHHHHHH----TCEEEEEEEEC
T ss_pred ccEEEEecCCcchHHHHHHHHHc----CCeEEEEEEeC
Confidence 68999999999999888777654 68899999853
No 56
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=57.54 E-value=22 Score=30.48 Aligned_cols=67 Identities=7% Similarity=0.140 Sum_probs=43.4
Q ss_pred HHHHHhhcCCCcEEEEEEEcCChHHHHHHH---hccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEE
Q 021587 187 KFLDTCSQSKVMVDTVLIESDLVAKAILDL---IPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIK 263 (310)
Q Consensus 187 ~~~~~~~~~gV~ve~~vveG~~~aeaIve~---A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVl 263 (310)
++...++..|+.++..+.--...-+.+.++ +++.+++.||.|+-+.+. | +.-|....+ +||+
T Consensus 25 ~a~~~L~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~--L-----------pgvvA~~t~--~PVI 89 (174)
T 3lp6_A 25 DAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAGGAAH--L-----------PGMVAAATP--LPVI 89 (174)
T ss_dssp HHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHHHHHTCCEEEEEEESSCC--H-----------HHHHHHHCS--SCEE
T ss_pred HHHHHHHHcCCCEEEEEECCCCCHHHHHHHHHHHHhCCCCEEEEecCchhh--h-----------HHHHHhccC--CCEE
Confidence 444455566898887777543334555555 455689999988876655 2 333555666 8999
Q ss_pred EEcCC
Q 021587 264 VVCEG 268 (310)
Q Consensus 264 VV~~~ 268 (310)
=||-.
T Consensus 90 gVP~~ 94 (174)
T 3lp6_A 90 GVPVP 94 (174)
T ss_dssp EEEEC
T ss_pred EeeCC
Confidence 88743
No 57
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=56.41 E-value=15 Score=28.26 Aligned_cols=48 Identities=23% Similarity=0.242 Sum_probs=31.0
Q ss_pred hHHHHHHHhccCCCCEEEECCC----CC-C--chhhhhcccCCCCcHHHHHHhhCCCCceEEEEcC
Q 021587 209 VAKAILDLIPVLNIRKLVVGTT----KS-S--LRVLRKSKSGRISGMADHILQTAPETCEIKVVCE 267 (310)
Q Consensus 209 ~aeaIve~A~e~~aDLIVMGSr----G~-g--~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV~~ 267 (310)
..+.|.+++++++++.||||-. |. + ....++| +.++-+. + .||..+-+
T Consensus 39 ~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f--------~~~L~~~-~--lpV~~~DE 93 (98)
T 1iv0_A 39 DVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPL--------VEALRAR-G--VEVELWDE 93 (98)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHH--------HHHHHHT-T--CEEEEECC
T ss_pred HHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHH--------HHHHhcC-C--CCEEEECC
Confidence 3578888999999999999933 21 1 1112232 5566554 4 89988765
No 58
>3g40_A Na-K-CL cotransporter; alpha/beta fold 10-stranded twisted beta sheet, transport protein; 1.90A {Methanosarcina acetivorans}
Probab=55.87 E-value=27 Score=32.40 Aligned_cols=97 Identities=8% Similarity=0.007 Sum_probs=58.4
Q ss_pred CCCCCCEEEEeecC----------CHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 021587 106 GTQEEDIIYVAVGK----------SQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMA 175 (310)
Q Consensus 106 ~~~~~~kILVAVDg----------Se~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~ 175 (310)
+-..+++|=|=+.+ ..+..-++-.|..+....+++|.|+-|++..
T Consensus 151 ~fg~~~~IdvW~~~~~~~W~~g~~~~Ng~LmlllAylL~~nW~A~I~L~~vV~de------------------------- 205 (294)
T 3g40_A 151 GLGRQNLINLWIENRGLDWDISMELGNMDLALLIAYKLKSNWKASLSFMTFAPTA------------------------- 205 (294)
T ss_dssp TTTTSCEEEEECCCC---CCCCSCCCTTHHHHHHHHHHHHHHTCEEEEEEECSSH-------------------------
T ss_pred CCCCCceEEEecCCCCCcccccccccchhHHHHHHHHHhhCcCCeEEEEEecCCH-------------------------
Confidence 33456777776433 2233445555555554569999999997531
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCc
Q 021587 176 QETGKRRQLLQKFLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSL 234 (310)
Q Consensus 176 ~~~e~a~elL~~~~~~~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~ 234 (310)
..++.+++.|+++.+.++- +... .++. ++ -..|+..+ -+|||+++|-...--
T Consensus 206 ~a~~~a~~~l~~Lv~~~Ri-~a~~--~vv~-~~-F~~il~~s--~~ADL~flGl~~~~d 257 (294)
T 3g40_A 206 IQAQAAENFLQSLAELARI-PNVK--MQVL-RE-NPIKSSKL--PFASLHIFSLDPNPD 257 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTC-CSCE--EEEE-SS-CTTTSSSC--CCCSEEEEECCSSCC
T ss_pred HHHHHHHHHHHHHHHHhcC-CceE--EEec-Cc-hHHHHhhC--cCCCEEEEcCCCCCc
Confidence 1235667777777777653 3333 2334 55 45555544 469999999876533
No 59
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae}
Probab=54.07 E-value=24 Score=31.42 Aligned_cols=36 Identities=3% Similarity=0.002 Sum_probs=28.4
Q ss_pred CEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEe
Q 021587 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVF 147 (310)
Q Consensus 111 ~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi 147 (310)
.+|+|++-|.+.|.-.|..+.+.... +..+.++|+-
T Consensus 42 ~~v~va~SGGkDS~vLL~ll~~~~~~-~~~i~vv~iD 77 (261)
T 2oq2_A 42 PHLFQTTAFGLTGLVTIDMLSKLSEK-YYMPELLFID 77 (261)
T ss_dssp SSEEEECCCCHHHHHHHHHHHHHTTT-SCCCEEEEEC
T ss_pred CCEEEEecCCHHHHHHHHHHHHhCcc-CCCeeEEEec
Confidence 36999999999999888887766543 4578888884
No 60
>2wq7_A RE11660P; lyase-DNA complex, DNA repair, DNA lesion, lyase; HET: TDY Z FAD; 2.00A {Drosophila melanogaster} PDB: 2wb2_A* 2wq6_A* 3cvu_A* 3cvv_A* 3cvy_A* 3cvw_A* 3cvx_A*
Probab=53.65 E-value=44 Score=33.10 Aligned_cols=94 Identities=13% Similarity=0.094 Sum_probs=57.3
Q ss_pred cCCHHHHHHHHHHHHHhcC--CCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 021587 118 GKSQSSMDALSWTLRHAVN--PSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLDTCSQS 195 (310)
Q Consensus 118 DgSe~S~~AL~wAl~lA~~--~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~~~~~~~~ 195 (310)
|.=-.-..||..|++.+.. .+..|+.|.++++... +... .....+ .-..+-|..+.+.+++.
T Consensus 38 DLRl~DN~aL~~A~~~~~~~~~~~pv~~vfi~dp~~~-----~~~~---~~~~r~--------~Fl~~sL~~L~~~L~~~ 101 (543)
T 2wq7_A 38 GLRLHDNPALSHIFTAANAAPGRYFVRPIFILDPGIL-----DWMQ---VGANRW--------RFLQQTLEDLDNQLRKL 101 (543)
T ss_dssp CCCSTTCHHHHHHHHHHHHSTTTEEEEEEEEECTTGG-----GCTT---SCHHHH--------HHHHHHHHHHHHHHHHT
T ss_pred CcCcchHHHHHHHHHhCccccCCCeEEEEEEECchhh-----cccC---CCHHHH--------HHHHHHHHHHHHHHHHC
Confidence 5444455678888776643 3566999999987532 1000 111111 12234455555556666
Q ss_pred CCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCC
Q 021587 196 KVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT 230 (310)
Q Consensus 196 gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSr 230 (310)
|..+. ++.|+ +.+.|.+++++++++.|+.-..
T Consensus 102 G~~L~--v~~g~-~~~~l~~l~~~~~~~~v~~~~~ 133 (543)
T 2wq7_A 102 NSRLF--VVRGK-PAEVFPRIFKSWRVEMLTFETD 133 (543)
T ss_dssp TCCCE--EEESC-HHHHHHHHHHHTTEEEEEEECC
T ss_pred CCeEE--EEeCC-HHHHHHHHHHHcCCCEEEEecC
Confidence 76554 45565 6899999999999999988644
No 61
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=52.68 E-value=28 Score=34.38 Aligned_cols=35 Identities=9% Similarity=0.060 Sum_probs=28.6
Q ss_pred CEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEec
Q 021587 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (310)
Q Consensus 111 ~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~ 148 (310)
++|+|++-|...|.-++.++.+.. +.+++.|||-.
T Consensus 231 ~kvlvalSGGvDSsvla~ll~~~~---G~~v~av~vd~ 265 (527)
T 3tqi_A 231 EQVIVGLSGGVDSAVTATLVHKAI---GDQLVCVLVDT 265 (527)
T ss_dssp SCEEEECTTTHHHHHHHHHHHHHH---GGGEEEEEECC
T ss_pred CeEEEEEecCcCHHHHHHHHHHHh---CCeEEEEEecc
Confidence 689999999999998888776543 56899999853
No 62
>1u3d_A Cryptochrome 1 apoprotein; photolyase, AMPPNP, signaling protein; HET: FAD ANP NDS; 2.45A {Arabidopsis thaliana} SCOP: a.99.1.1 c.28.1.1 PDB: 1u3c_A*
Probab=51.71 E-value=84 Score=30.68 Aligned_cols=96 Identities=10% Similarity=0.013 Sum_probs=56.9
Q ss_pred EEEEee--cCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 021587 112 IIYVAV--GKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFL 189 (310)
Q Consensus 112 kILVAV--DgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~~ 189 (310)
++||=+ |.=-.-..||..|++. + .++.|.|+++..... ..+ .. . . +.-..+-|..+.
T Consensus 13 ~~l~WfrrDLRl~DN~aL~~A~~~----~-~v~pvfi~dp~~~~~----~~~----~~-~----~---~~fl~~sL~~L~ 71 (509)
T 1u3d_A 13 CSIVWFRRDLRVEDNPALAAAVRA----G-PVIALFVWAPEEEGH----YHP----GR-V----S---RWWLKNSLAQLD 71 (509)
T ss_dssp CEEEEESSCCCSTTCHHHHHHHHH----S-CEEEEEEECGGGGTT----CCC----CH-H----H---HHHHHHHHHHHH
T ss_pred cEEEEECCCCccchhHHHHHHHhC----C-CEEEEEEECchhccc----CCc----ch-H----H---HHHHHHHHHHHH
Confidence 344443 5544455677777764 2 577888887642210 000 00 0 0 012344455666
Q ss_pred HHhhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCC
Q 021587 190 DTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT 230 (310)
Q Consensus 190 ~~~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSr 230 (310)
+.+++.|+.+. ++.++++.+.|.+++++++++.|+.-..
T Consensus 72 ~~L~~~G~~L~--v~~~g~~~~~l~~l~~~~~~~~V~~~~~ 110 (509)
T 1u3d_A 72 SSLRSLGTCLI--TKRSTDSVASLLDVVKSTGASQIFFNHL 110 (509)
T ss_dssp HHHHHTTCCEE--EEECSCHHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHHCCCeEE--EEeCCCHHHHHHHHHHHcCCCEEEEecc
Confidence 66666677643 4555567899999999999999988654
No 63
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae}
Probab=51.33 E-value=45 Score=30.52 Aligned_cols=23 Identities=13% Similarity=-0.025 Sum_probs=19.7
Q ss_pred CEEEEeecCCHHHHHHHHHHHHH
Q 021587 111 DIIYVAVGKSQSSMDALSWTLRH 133 (310)
Q Consensus 111 ~kILVAVDgSe~S~~AL~wAl~l 133 (310)
.+|+|++-|.+.|.-.|..+.+.
T Consensus 54 ~~i~vafSGGKDS~VLL~L~~~~ 76 (306)
T 2wsi_A 54 GEISFSYNGGKDCQVLLLLYLSC 76 (306)
T ss_dssp SSEEEECCSCHHHHHHHHHHHHH
T ss_pred CCEEEEecCCHHHHHHHHHHHHH
Confidence 47999999999999888877665
No 64
>1np7_A DNA photolyase; protein with FAD cofactor; HET: DNA FAD; 1.90A {Synechocystis SP} SCOP: a.99.1.1 c.28.1.1
Probab=50.60 E-value=62 Score=31.43 Aligned_cols=95 Identities=11% Similarity=0.102 Sum_probs=53.7
Q ss_pred cCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 021587 118 GKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLDTCSQSKV 197 (310)
Q Consensus 118 DgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~~~~~~~~gV 197 (310)
|.=-.-..||..|++ .+..|+.|.|+++........+... .....+ .-..+-|..+.+.+++.|+
T Consensus 15 DLRl~DN~aL~~A~~----~~~~v~~vfi~dp~~~~~~~~~~~~---~~~~r~--------~Fl~~sL~~L~~~L~~~G~ 79 (489)
T 1np7_A 15 DLRLHDHEPLHRALK----SGLAITAVYCYDPRQFAQTHQGFAK---TGPWRS--------NFLQQSVQNLAESLQKVGN 79 (489)
T ss_dssp CCCSTTCHHHHHHHH----TTSEEEEEEEECGGGGSBCTTSCBS---SCHHHH--------HHHHHHHHHHHHHHHHTTC
T ss_pred CCCcchHHHHHHHHh----cCCCEEEEEEECchhhcccccccCC---CCHHHH--------HHHHHHHHHHHHHHHHCCC
Confidence 443334456666654 3457889999876432110001100 111111 1223445555556666676
Q ss_pred cEEEEEEEcCChHHHHHHHhccCCCCEEEECCC
Q 021587 198 MVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT 230 (310)
Q Consensus 198 ~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSr 230 (310)
.+. ++.|. +.+.|.+++++++++.|+.-..
T Consensus 80 ~L~--v~~g~-~~~~l~~l~~~~~~~~V~~~~~ 109 (489)
T 1np7_A 80 KLL--VTTGL-PEQVIPQIAKQINAKTIYYHRE 109 (489)
T ss_dssp CEE--EEESC-HHHHHHHHHHHTTEEEEEEECC
T ss_pred cEE--EEECC-HHHHHHHHHHHcCCCEEEEecc
Confidence 654 45565 6899999999999998888654
No 65
>2j07_A Deoxyribodipyrimidine photo-lyase; flavoprotein, nucleotide-binding, DNA repair; HET: FAD HDF; 1.95A {Thermus thermophilus} SCOP: a.99.1.1 c.28.1.1 PDB: 1iqu_A* 1iqr_A* 2j08_A* 2j09_A*
Probab=47.66 E-value=45 Score=31.88 Aligned_cols=46 Identities=7% Similarity=-0.010 Sum_probs=32.9
Q ss_pred HHHHHHHHHHhhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCC
Q 021587 182 RQLLQKFLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT 230 (310)
Q Consensus 182 ~elL~~~~~~~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSr 230 (310)
.+-|..+.+.+++.|+... +..|+ +.+.|.+++++++++.|+.-..
T Consensus 51 ~~sL~~l~~~L~~~g~~l~--~~~g~-~~~~l~~l~~~~~~~~v~~~~~ 96 (420)
T 2j07_A 51 LENVRALREAYRARGGALW--VLEGL-PWEKVPEAARRLKAKAVYALTS 96 (420)
T ss_dssp HHHHHHHHHHHHHTTCCEE--EEESC-HHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHHHHHCCCeEE--EEeCC-HHHHHHHHHHHcCCCEEEEecc
Confidence 3445555556666676654 45565 6899999999999999998544
No 66
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=47.29 E-value=19 Score=28.17 Aligned_cols=51 Identities=24% Similarity=0.253 Sum_probs=36.4
Q ss_pred HHHHHHHHHhhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCc
Q 021587 183 QLLQKFLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSL 234 (310)
Q Consensus 183 elL~~~~~~~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~ 234 (310)
+.|.+|.++.++.|+++.++-- -....+.|-++.+++++.++|+--....|
T Consensus 13 etlrkfkdiikkngfkvrtvrs-pqelkdsieelvkkynativvvvvddkew 63 (134)
T 2l69_A 13 ETLRKFKDIIKKNGFKVRTVRS-PQELKDSIEELVKKYNATIVVVVVDDKEW 63 (134)
T ss_dssp HHHHHHHHHHHHTTCEEEEECS-HHHHHHHHHHHTTCCCCEEEEEECSSHHH
T ss_pred HHHHHHHHHHHhcCceEEEecC-HHHHHHHHHHHHHHhCCeEEEEEEccHHH
Confidence 3466788888888988875422 22346778889999999988887655433
No 67
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=47.10 E-value=41 Score=31.86 Aligned_cols=35 Identities=6% Similarity=-0.102 Sum_probs=26.8
Q ss_pred CCCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEe
Q 021587 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVF 147 (310)
Q Consensus 109 ~~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi 147 (310)
..++|+|++-|...|.-++.++. +.+-+|+.||+.
T Consensus 16 ~~~kVvVa~SGGvDSsv~a~lL~----~~G~~V~~v~~~ 50 (380)
T 2der_A 16 TAKKVIVGMSGGVDSSVSAWLLQ----QQGYQVEGLFMK 50 (380)
T ss_dssp -CCEEEEECCSCSTTHHHHHHHH----TTCCEEEEEEEE
T ss_pred CCCEEEEEEEChHHHHHHHHHHH----HcCCeEEEEEEE
Confidence 45799999999888887766543 347889999986
No 68
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A
Probab=46.98 E-value=35 Score=31.18 Aligned_cols=35 Identities=11% Similarity=0.060 Sum_probs=28.3
Q ss_pred CEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEec
Q 021587 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (310)
Q Consensus 111 ~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~ 148 (310)
++|+|++-|...|.-++.++.+.. +.+++.||+-.
T Consensus 21 ~kvlvalSGGvDSsvla~ll~~~~---g~~v~av~vd~ 55 (308)
T 2dpl_A 21 SKAIIALSGGVDSSTAAVLAHKAI---GDRLHAVFVNT 55 (308)
T ss_dssp SCEEEECCSSHHHHHHHHHHHHHH---GGGEEEEEEEC
T ss_pred CCEEEEEeChHHHHHHHHHHHHhh---CCCEEEEEEcC
Confidence 589999999999998888776643 46788999864
No 69
>3g40_A Na-K-CL cotransporter; alpha/beta fold 10-stranded twisted beta sheet, transport protein; 1.90A {Methanosarcina acetivorans}
Probab=46.55 E-value=45 Score=30.88 Aligned_cols=95 Identities=13% Similarity=0.181 Sum_probs=59.0
Q ss_pred CEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 021587 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLD 190 (310)
Q Consensus 111 ~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~~~ 190 (310)
-+|||+++........++.|..+.. +.+-+++++|.+... . +.+ . ++ ++.+.+
T Consensus 21 P~iLV~sg~p~~~~~li~la~~lt~-~~G~ltv~~i~p~~~------~---------~~l---~----~q----l~~l~~ 73 (294)
T 3g40_A 21 ANLLVPVEDPRELMGTFDFLRDITY-PKGSVKLLGLAGNTD------K---------ENL---L----SQ----LPSISE 73 (294)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHHT-TTCEEEEEECC---C------T---------TCH---H----HH----HHHHHH
T ss_pred CcEEEecCCchhhhhHHHHHHHhcc-CceeEEEEEEccCCC------c---------cHH---H----HH----HHHHHH
Confidence 3699999887788889999987765 667899999975421 0 000 0 11 244455
Q ss_pred HhhcCCCcEEEEEEEcCChHHHHHHHhccCC-----CCEEEECCCCC
Q 021587 191 TCSQSKVMVDTVLIESDLVAKAILDLIPVLN-----IRKLVVGTTKS 232 (310)
Q Consensus 191 ~~~~~gV~ve~~vveG~~~aeaIve~A~e~~-----aDLIVMGSrG~ 232 (310)
.++++++.+-..++...++...+...++.++ ...|+||-...
T Consensus 74 ~l~~r~v~a~~~vi~a~d~~~G~~~lvq~yglg~l~PNTilLg~~~~ 120 (294)
T 3g40_A 74 GFQEEGVFSSWTIIDTAEFEENLVVGMEALTGSFFRPSILFLRLPEN 120 (294)
T ss_dssp HHHHTTCEEEEEEC-----CHHHHHHHHHHTTCSSCSCEEEEECCSS
T ss_pred HHHhCCceeEEEEEecCChhHHHHHHHHHcCCCCCCCCEEEeCCCCC
Confidence 6677788877777766666777776666544 56788876654
No 70
>3fy4_A 6-4 photolyase; DNA repair, clock cryptochrome; HET: MES FAD; 2.70A {Arabidopsis thaliana}
Probab=42.71 E-value=53 Score=32.70 Aligned_cols=45 Identities=4% Similarity=0.180 Sum_probs=31.3
Q ss_pred HHHHHHHHHhhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCC
Q 021587 183 QLLQKFLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT 230 (310)
Q Consensus 183 elL~~~~~~~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSr 230 (310)
+-|..+.+.+++.|... ++..|+ +.+.|.+++++++|+.|+.-..
T Consensus 68 ~sL~~L~~~L~~~G~~L--~v~~G~-~~~vl~~L~~~~~~~~V~~n~~ 112 (537)
T 3fy4_A 68 ESLKDLDSSLKKLGSRL--LVFKGE-PGEVLVRCLQEWKVKRLCFEYD 112 (537)
T ss_dssp HHHHHHHHHHHHTTCCC--EEEESC-HHHHHHHHHTTSCEEEEEECCC
T ss_pred HHHHHHHHHHHHcCCce--EEEECC-HHHHHHHHHHHcCCCEEEEecc
Confidence 34445555555556543 345665 6899999999999999998654
No 71
>2j4d_A Cryptochrome 3, cryptochrome DASH; DNA-binding protein, flavoprotein, FAD, mitochondrion, plastid, chromophore, chloroplast; HET: FAD MHF; 1.9A {Arabidopsis thaliana} PDB: 2vtb_A* 2ijg_X* 2vtb_B*
Probab=42.38 E-value=93 Score=30.59 Aligned_cols=102 Identities=10% Similarity=0.012 Sum_probs=58.0
Q ss_pred CEEEEee--cCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCC-CCCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 021587 111 DIIYVAV--GKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPL-GKLPRNQVNPEQLETFMAQETGKRRQLLQK 187 (310)
Q Consensus 111 ~kILVAV--DgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~-g~ip~~~~~~e~~e~~~~~~~e~a~elL~~ 187 (310)
+.+||=+ |.=-.-..||..|++. +..|+.|.|+++........ +... .....+ .-..+-|..
T Consensus 40 ~~~l~WfrrDLRl~DN~AL~~A~~~----~~~v~~vfi~dp~~~~~~~~~~~~~---~~~~r~--------~Fl~~sL~~ 104 (525)
T 2j4d_A 40 GVTILWFRNDLRVLDNDALYKAWSS----SDTILPVYCLDPRLFHTTHFFNFPK---TGALRG--------GFLMECLVD 104 (525)
T ss_dssp CEEEEEESSCCCSTTCHHHHHHHHT----CSEEEEEEEECGGGGSBCTTTCCBS---SCHHHH--------HHHHHHHHH
T ss_pred CeEEEEeCCCcCcchhHHHHHHHhc----CCcEEEEEEECchhhcccccccCCC---CCHHHH--------HHHHHHHHH
Confidence 4555554 5544445567766653 45799999998643211000 1110 111111 122344555
Q ss_pred HHHHhhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCC
Q 021587 188 FLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT 230 (310)
Q Consensus 188 ~~~~~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSr 230 (310)
+.+.+++.|+.+. ++.|. +.+.|.+++++++++.|+.-..
T Consensus 105 L~~~L~~~G~~L~--v~~g~-~~~~l~~l~~~~~~~~V~~~~~ 144 (525)
T 2j4d_A 105 LRKNLMKRGLNLL--IRSGK-PEEILPSLAKDFGARTVFAHKE 144 (525)
T ss_dssp HHHHHHHTTCCCE--EEESC-HHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHcCCeEE--EEeCC-HHHHHHHHHHHcCCCEEEEecc
Confidence 5555666676554 45564 6899999999999999988644
No 72
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=38.85 E-value=1.8e+02 Score=26.47 Aligned_cols=87 Identities=16% Similarity=0.151 Sum_probs=50.4
Q ss_pred CCCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 021587 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (310)
Q Consensus 109 ~~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~ 188 (310)
...+++|++-| -.|.-|+.++. +.|.+++.+|... + ... .+.++++.+.+
T Consensus 178 ~~~kvlvllSG-vDS~vaa~ll~----~~G~~v~~v~~~~---------~--------~~~--------~~~a~~~a~~l 227 (307)
T 1vbk_A 178 TEGRMIGILHD-ELSALAIFLMM----KRGVEVIPVYIGK---------D--------DKN--------LEKVRSLWNLL 227 (307)
T ss_dssp TTCEEEEECSS-HHHHHHHHHHH----HBTCEEEEEEESC---------S--------SHH--------HHHHHHHHHHH
T ss_pred CCCcEEEEEeC-CcHHHHHHHHH----hCCCeEEEEEEEE---------C--------HHH--------HHHHHHHHHHH
Confidence 34699999999 99976665443 3688999999861 1 001 11222222222
Q ss_pred HHHhhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCC
Q 021587 189 LDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT 230 (310)
Q Consensus 189 ~~~~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSr 230 (310)
....-..+++. .++. .. ..+.++|++.++|.|+.|.+
T Consensus 228 ~~~~~~~~i~~--~vv~--~~-~~~~~~A~~~ga~~I~tG~~ 264 (307)
T 1vbk_A 228 KRYSYGSKGFL--VVAE--SF-DRVLKLIRDFGVKGVIKGLR 264 (307)
T ss_dssp HTTCTTSCCCC--EEES--SH-HHHHHHHHHHTCCEEECCCC
T ss_pred hhhccCCCCcE--EEeC--CC-HHHHHHHHHcCCCEEEECcc
Confidence 11101123433 3332 12 33448999999999999987
No 73
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=37.70 E-value=80 Score=30.67 Aligned_cols=69 Identities=10% Similarity=0.037 Sum_probs=40.3
Q ss_pred HHHHHHHhhcCCCcEEEEEEEcCChHHHHHHH---hccCCC-CEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCc
Q 021587 185 LQKFLDTCSQSKVMVDTVLIESDLVAKAILDL---IPVLNI-RKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETC 260 (310)
Q Consensus 185 L~~~~~~~~~~gV~ve~~vveG~~~aeaIve~---A~e~~a-DLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~C 260 (310)
.+++...++..|+.++..+.-....-+.+.++ +++.++ +.||.|+-+.+. | +.-|....+ +
T Consensus 281 ~~~a~~~l~~~gi~~~v~V~saHR~p~~~~~~~~~~~~~g~~~viIa~AG~~a~--L-----------pgvva~~t~--~ 345 (425)
T 2h31_A 281 CEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNG--L-----------GPVMSGNTA--Y 345 (425)
T ss_dssp HHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHHHTTCCCEEEEEECCSSCC--H-----------HHHHHHHCS--S
T ss_pred HHHHHHHHHHcCCceEEeeeeccCCHHHHHHHHHHHHHCCCCeEEEEEcCcccc--h-----------HhHHhccCC--C
Confidence 34445555566787777666433223444443 445667 577777765554 2 334555666 9
Q ss_pred eEEEEcCC
Q 021587 261 EIKVVCEG 268 (310)
Q Consensus 261 pVlVV~~~ 268 (310)
||+-||-.
T Consensus 346 PVIgvP~~ 353 (425)
T 2h31_A 346 PVISCPPL 353 (425)
T ss_dssp CEEECCCC
T ss_pred CEEEeeCc
Confidence 99988864
No 74
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=37.14 E-value=41 Score=29.37 Aligned_cols=36 Identities=8% Similarity=-0.010 Sum_probs=28.5
Q ss_pred CCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEE
Q 021587 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHV 146 (310)
Q Consensus 110 ~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHV 146 (310)
.+||+|+|-|+-.+.++++.+-.+.+ .+.+|+++-.
T Consensus 4 ~k~IllgvTGaiaa~k~~~ll~~L~~-~g~eV~vv~T 39 (209)
T 3zqu_A 4 PERITLAMTGASGAQYGLRLLDCLVQ-EEREVHFLIS 39 (209)
T ss_dssp CSEEEEEECSSSCHHHHHHHHHHHHH-TTCEEEEEEC
T ss_pred CCEEEEEEECHHHHHHHHHHHHHHHH-CCCEEEEEEC
Confidence 47999999999999999988765544 5788776654
No 75
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=36.83 E-value=36 Score=28.83 Aligned_cols=34 Identities=9% Similarity=0.141 Sum_probs=26.7
Q ss_pred CEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEE
Q 021587 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIH 145 (310)
Q Consensus 111 ~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVH 145 (310)
+||+|+|-|+-.+.+++++.-. +++.+.+|+++-
T Consensus 6 k~IllgvTGs~aa~k~~~ll~~-L~~~g~~V~vv~ 39 (175)
T 3qjg_A 6 ENVLICLCGSVNSINISHYIIE-LKSKFDEVNVIA 39 (175)
T ss_dssp CEEEEEECSSGGGGGHHHHHHH-HTTTCSEEEEEE
T ss_pred CEEEEEEeCHHHHHHHHHHHHH-HHHCCCEEEEEE
Confidence 7999999999999999987654 555677766554
No 76
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=35.92 E-value=64 Score=29.40 Aligned_cols=72 Identities=14% Similarity=0.042 Sum_probs=35.6
Q ss_pred HHHHHHhhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEEE
Q 021587 186 QKFLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKVV 265 (310)
Q Consensus 186 ~~~~~~~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV 265 (310)
+++...+++.++.++........-+..+++.+...++|+||+. -|.|. +. .++..+++ +...+|+.++
T Consensus 45 ~~i~~~L~~~g~~~~~~~t~~~~~a~~~~~~~~~~~~d~vvv~-GGDGT--v~--------~v~~~l~~-~~~~~pl~iI 112 (337)
T 2qv7_A 45 PDALIKLEKAGYETSAYATEKIGDATLEAERAMHENYDVLIAA-GGDGT--LN--------EVVNGIAE-KPNRPKLGVI 112 (337)
T ss_dssp HHHHHHHHHTTEEEEEEECCSTTHHHHHHHHHTTTTCSEEEEE-ECHHH--HH--------HHHHHHTT-CSSCCEEEEE
T ss_pred HHHHHHHHHcCCeEEEEEecCcchHHHHHHHHhhcCCCEEEEE-cCchH--HH--------HHHHHHHh-CCCCCcEEEe
Confidence 3444445555666554433332224555555555577866542 13343 22 23444432 1223788888
Q ss_pred cCCc
Q 021587 266 CEGK 269 (310)
Q Consensus 266 ~~~k 269 (310)
|-|.
T Consensus 113 P~GT 116 (337)
T 2qv7_A 113 PMGT 116 (337)
T ss_dssp ECSS
T ss_pred cCCc
Confidence 8665
No 77
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=35.87 E-value=45 Score=28.86 Aligned_cols=35 Identities=9% Similarity=0.002 Sum_probs=26.7
Q ss_pred CEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEE
Q 021587 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIH 145 (310)
Q Consensus 111 ~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVH 145 (310)
+||+|+|-||-.+.++++..-.+.+..+.+|+++-
T Consensus 1 ~~IllgvTGsiaa~k~~~ll~~L~~~~g~~V~vv~ 35 (197)
T 1sbz_A 1 MKLIVGMTGATGAPLGVALLQALREMPNVETHLVM 35 (197)
T ss_dssp CEEEEEECSSSCHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred CEEEEEEeChHHHHHHHHHHHHHHhccCCEEEEEE
Confidence 38999999999999999887665543377776654
No 78
>1owl_A Photolyase, deoxyribodipyrimidine photolyase; DNA repair, flavin enzyme, photoreactivating enzyme; HET: FAD; 1.80A {Synechococcus elongatus} SCOP: a.99.1.1 c.28.1.1 PDB: 1owm_A* 1own_A* 1owo_A* 1owp_A* 1qnf_A* 1tez_A*
Probab=34.40 E-value=63 Score=31.39 Aligned_cols=84 Identities=12% Similarity=0.103 Sum_probs=48.4
Q ss_pred HHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE
Q 021587 124 MDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLDTCSQSKVMVDTVL 203 (310)
Q Consensus 124 ~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~~~~~~~~gV~ve~~v 203 (310)
..||..|++.. ..|+.|.++++... +... .....+ .-..+-|..+.+.+++.|+.+. +
T Consensus 18 n~aL~~A~~~~----~~v~~vfi~dp~~~-----~~~~---~~~~r~--------~fl~~sL~~L~~~L~~~G~~L~--v 75 (484)
T 1owl_A 18 NIGLAAARAQS----AQLIGLFCLDPQIL-----QSAD---MAPARV--------AYLQGCLQELQQRYQQAGSRLL--L 75 (484)
T ss_dssp CHHHHHHHHHC----SCEEEEEEECHHHH-----TCTT---CCHHHH--------HHHHHHHHHHHHHHHHHTSCEE--E
T ss_pred hHHHHHHHhcC----CCEEEEEEEcchhh-----cCCC---CCHHHH--------HHHHHHHHHHHHHHHHCCCeEE--E
Confidence 34666666532 36889999876321 1000 011111 1223334444445555566544 4
Q ss_pred EEcCChHHHHHHHhccCCCCEEEECCC
Q 021587 204 IESDLVAKAILDLIPVLNIRKLVVGTT 230 (310)
Q Consensus 204 veG~~~aeaIve~A~e~~aDLIVMGSr 230 (310)
+.|. +.+.|.+++++++++.|+.-..
T Consensus 76 ~~g~-~~~~l~~l~~~~~~~~v~~~~~ 101 (484)
T 1owl_A 76 LQGD-PQHLIPQLAQQLQAEAVYWNQD 101 (484)
T ss_dssp EESC-HHHHHHHHHHHTTCSEEEEECC
T ss_pred EeCC-HHHHHHHHHHHcCCCEEEEecc
Confidence 5564 6899999999999999998543
No 79
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=33.55 E-value=52 Score=28.13 Aligned_cols=33 Identities=6% Similarity=-0.020 Sum_probs=25.8
Q ss_pred CEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEE
Q 021587 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLI 144 (310)
Q Consensus 111 ~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LV 144 (310)
+||+|++-|+-.+.+++++.-.+.+ .+.+++++
T Consensus 2 k~IllgvTGs~aa~k~~~l~~~L~~-~g~~V~vv 34 (189)
T 2ejb_A 2 QKIALCITGASGVIYGIKLLQVLEE-LDFSVDLV 34 (189)
T ss_dssp CEEEEEECSSTTHHHHHHHHHHHHH-TTCEEEEE
T ss_pred CEEEEEEECHHHHHHHHHHHHHHHH-CCCEEEEE
Confidence 5899999999889999988766654 47766554
No 80
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=33.39 E-value=85 Score=30.38 Aligned_cols=34 Identities=9% Similarity=0.087 Sum_probs=28.1
Q ss_pred CCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEe
Q 021587 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVF 147 (310)
Q Consensus 110 ~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi 147 (310)
.+||+|++-|.-.|--++.|+.+ .+.+|+.|++-
T Consensus 14 ~~KVVVA~SGGlDSSv~a~~Lke----~G~eViavt~d 47 (421)
T 1vl2_A 14 KEKVVLAYSGGLDTSVILKWLCE----KGFDVIAYVAN 47 (421)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHH----TTCEEEEEEEE
T ss_pred cCCEEEEeCCcHHHHHHHHHHHH----CCCeEEEEEEE
Confidence 46899999999999888888754 26788888885
No 81
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=32.69 E-value=1.1e+02 Score=26.70 Aligned_cols=86 Identities=12% Similarity=-0.018 Sum_probs=51.2
Q ss_pred CCCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 021587 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (310)
Q Consensus 109 ~~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~ 188 (310)
...||.|-+-|+.....+|-.+... ..+++|.+| +..... ..
T Consensus 11 ~~~ri~vl~SG~gsnl~all~~~~~--~~~~eI~~V--is~~~a----------------------------------~~ 52 (215)
T 3da8_A 11 APARLVVLASGTGSLLRSLLDAAVG--DYPARVVAV--GVDREC----------------------------------RA 52 (215)
T ss_dssp SSEEEEEEESSCCHHHHHHHHHSST--TCSEEEEEE--EESSCC----------------------------------HH
T ss_pred CCcEEEEEEeCChHHHHHHHHHHhc--cCCCeEEEE--EeCCch----------------------------------HH
Confidence 4568999999998888888766521 234555444 432110 01
Q ss_pred HHHhhcCCCcEEEEEEEc-CC---hHHHHHHHhccCCCCEEEECCCCC
Q 021587 189 LDTCSQSKVMVDTVLIES-DL---VAKAILDLIPVLNIRKLVVGTTKS 232 (310)
Q Consensus 189 ~~~~~~~gV~ve~~vveG-~~---~aeaIve~A~e~~aDLIVMGSrG~ 232 (310)
.+.|++.|+.+...-... .. -.+++++..+++++|+||+-.-++
T Consensus 53 ~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~Dlivlagy~~ 100 (215)
T 3da8_A 53 AEIAAEASVPVFTVRLADHPSRDAWDVAITAATAAHEPDLVVSAGFMR 100 (215)
T ss_dssp HHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHTTCCSEEEEEECCS
T ss_pred HHHHHHcCCCEEEeCcccccchhhhhHHHHHHHHhhCCCEEEEcCchh
Confidence 234455677765321100 00 135788888899999999977654
No 82
>2e0i_A 432AA long hypothetical deoxyribodipyrimidine PHO; photolyase, FAD, DNA repair, lyase; HET: FAD; 2.80A {Sulfolobus tokodaii}
Probab=32.50 E-value=95 Score=29.86 Aligned_cols=82 Identities=9% Similarity=0.148 Sum_probs=47.8
Q ss_pred HHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEEE
Q 021587 125 DALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLDTCSQSKVMVDTVLI 204 (310)
Q Consensus 125 ~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~~~~~~~~gV~ve~~vv 204 (310)
.||..|++ .+..|+.|.|+++...-.. + ...... ..=..+-|..+.+.+++.|.... ++
T Consensus 17 ~aL~~A~~----~~~~v~~vfi~dp~~~~~~-----~--~~~~~r--------~~Fl~~sL~~L~~~L~~~G~~L~--v~ 75 (440)
T 2e0i_A 17 TGLNYALS----ECDRVIPVFIADPRQLINN-----P--YKSEFA--------VSFMINSLLELDDELRKKGSRLN--VF 75 (440)
T ss_dssp HHHHHHHH----HSSEEEEEEEECHHHHSSC-----T--TCCHHH--------HHHHHHHHHHHHHHHHTTTCCCE--EE
T ss_pred HHHHHHHh----cCCCEEEEEEeChhhhccC-----C--cCCHHH--------HHHHHHHHHHHHHHHHHcCCeEE--EE
Confidence 46666655 3568999999976421000 0 001111 11233445556666666676554 44
Q ss_pred EcCChHHHHHHHhccCCCCEEEECCC
Q 021587 205 ESDLVAKAILDLIPVLNIRKLVVGTT 230 (310)
Q Consensus 205 eG~~~aeaIve~A~e~~aDLIVMGSr 230 (310)
.|. +.+.|.++++ +++.|+.-..
T Consensus 76 ~g~-~~~~l~~l~~--~~~~v~~~~~ 98 (440)
T 2e0i_A 76 FGE-AEKVVSRFFN--KVDAIYVNED 98 (440)
T ss_dssp ESC-HHHHHHHHCT--TCSEEEEECC
T ss_pred ECC-HHHHHHHHHc--CCCEEEEecc
Confidence 564 6899999998 9999888543
No 83
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=31.86 E-value=1.4e+02 Score=26.01 Aligned_cols=87 Identities=11% Similarity=0.037 Sum_probs=51.8
Q ss_pred CCCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 021587 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (310)
Q Consensus 109 ~~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~ 188 (310)
...||.|=+-|+.....|+-.++. ..+-..-++-|+....- . . .
T Consensus 7 ~~~ri~vl~SG~gsnl~all~~~~---~~~~~~~I~~Vis~~~~-----a-------~--------------~------- 50 (215)
T 3kcq_A 7 KELRVGVLISGRGSNLEALAKAFS---TEESSVVISCVISNNAE-----A-------R--------------G------- 50 (215)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHTC---CC-CSEEEEEEEESCTT-----C-------T--------------H-------
T ss_pred CCCEEEEEEECCcHHHHHHHHHHH---cCCCCcEEEEEEeCCcc-----h-------H--------------H-------
Confidence 346899999998888887776652 22222344555543210 0 0 0
Q ss_pred HHHhhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCCCC
Q 021587 189 LDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKS 232 (310)
Q Consensus 189 ~~~~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~ 232 (310)
.+.|++.|+.+...-...-. .+++++..+++++|+||+-.-++
T Consensus 51 l~~A~~~gIp~~~~~~~~~~-~~~~~~~L~~~~~Dlivlagy~~ 93 (215)
T 3kcq_A 51 LLIAQSYGIPTFVVKRKPLD-IEHISTVLREHDVDLVCLAGFMS 93 (215)
T ss_dssp HHHHHHTTCCEEECCBTTBC-HHHHHHHHHHTTCSEEEESSCCS
T ss_pred HHHHHHcCCCEEEeCcccCC-hHHHHHHHHHhCCCEEEEeCCce
Confidence 12355567776532111111 37889999999999999998765
No 84
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=31.50 E-value=1e+02 Score=30.22 Aligned_cols=35 Identities=11% Similarity=0.007 Sum_probs=28.7
Q ss_pred CEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEec
Q 021587 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFP 148 (310)
Q Consensus 111 ~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~ 148 (310)
++|+|++-|...|.-++.++.+.. +.+++.||+-.
T Consensus 228 ~~vvvalSGGvDSsv~a~ll~~a~---G~~v~av~v~~ 262 (525)
T 1gpm_A 228 DKVILGLSGGVDSSVTAMLLHRAI---GKNLTCVFVDN 262 (525)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHH---GGGEEEEEEEC
T ss_pred cceEEEecCCCCHHHHHHHHHHHh---CCCEEEEEEeC
Confidence 689999999999998888876543 46789999864
No 85
>1dnp_A DNA photolyase; DNA repair, electron transfer, excitation energy transfer, carbon-carbon, lyase (carbon-carbon); HET: DNA FAD MHF; 2.30A {Escherichia coli} SCOP: a.99.1.1 c.28.1.1
Probab=31.24 E-value=59 Score=31.53 Aligned_cols=48 Identities=4% Similarity=-0.050 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhhcCCCcEEEEEE--EcCChHHHHHHHhccCCCCEEEECCC
Q 021587 182 RQLLQKFLDTCSQSKVMVDTVLI--ESDLVAKAILDLIPVLNIRKLVVGTT 230 (310)
Q Consensus 182 ~elL~~~~~~~~~~gV~ve~~vv--eG~~~aeaIve~A~e~~aDLIVMGSr 230 (310)
.+-|..+.+.+++.|.......+ .|. +.+.|.+++++++++.|+.-..
T Consensus 55 ~~sL~~L~~~L~~~G~~L~v~~~~~~g~-~~~~l~~l~~~~~~~~v~~~~~ 104 (471)
T 1dnp_A 55 NAQLNGLQIALAEKGIPLLFREVDDFVA-SVEIVKQVCAENSVTHLFYNYQ 104 (471)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSSHHH-HHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHHHHHHHCCCeEEEEEccCCCC-HHHHHHHHHHHcCCCEEEEecc
Confidence 34455555566666776543211 454 5899999999999999988544
No 86
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=31.16 E-value=2.2e+02 Score=24.61 Aligned_cols=86 Identities=12% Similarity=0.091 Sum_probs=51.9
Q ss_pred CCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 021587 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFL 189 (310)
Q Consensus 110 ~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~~ 189 (310)
..||.|-+-|+.....||-.+.+.- .+.+|.+ |+.... . . .. .
T Consensus 5 ~~riavl~SG~Gsnl~all~~~~~~--~~~eI~~--Vis~~~------~--------a------------~~-------~ 47 (215)
T 3tqr_A 5 PLPIVVLISGNGTNLQAIIGAIQKG--LAIEIRA--VISNRA------D--------A------------YG-------L 47 (215)
T ss_dssp CEEEEEEESSCCHHHHHHHHHHHTT--CSEEEEE--EEESCT------T--------C------------HH-------H
T ss_pred CcEEEEEEeCCcHHHHHHHHHHHcC--CCCEEEE--EEeCCc------c--------h------------HH-------H
Confidence 4589999999988888888776532 3445444 443210 0 0 00 1
Q ss_pred HHhhcCCCcEEEEEEEc-CC---hHHHHHHHhccCCCCEEEECCCCC
Q 021587 190 DTCSQSKVMVDTVLIES-DL---VAKAILDLIPVLNIRKLVVGTTKS 232 (310)
Q Consensus 190 ~~~~~~gV~ve~~vveG-~~---~aeaIve~A~e~~aDLIVMGSrG~ 232 (310)
+.+++.|+.+...-... .. ..+++++..+++++|+||+-.-++
T Consensus 48 ~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~Dliv~agy~~ 94 (215)
T 3tqr_A 48 KRAQQADIPTHIIPHEEFPSRTDFESTLQKTIDHYDPKLIVLAGFMR 94 (215)
T ss_dssp HHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHTTCCSEEEESSCCS
T ss_pred HHHHHcCCCEEEeCccccCchhHhHHHHHHHHHhcCCCEEEEccchh
Confidence 33455677765321110 11 135788999999999999988764
No 87
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=31.10 E-value=40 Score=28.64 Aligned_cols=35 Identities=3% Similarity=0.045 Sum_probs=27.7
Q ss_pred CEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEE
Q 021587 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHV 146 (310)
Q Consensus 111 ~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHV 146 (310)
+||+|+|-|+-.+.+++++.-.+ ++.+.+|+++-.
T Consensus 3 k~IllgvTGs~aa~k~~~l~~~L-~~~g~~V~vv~T 37 (181)
T 1g63_A 3 GKLLICATASINVININHYIVEL-KQHFDEVNILFS 37 (181)
T ss_dssp CCEEEEECSCGGGGGHHHHHHHH-TTTSSCEEEEEC
T ss_pred CEEEEEEECHHHHHHHHHHHHHH-HHCCCEEEEEEc
Confidence 68999999999999999887655 445777766654
No 88
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=29.35 E-value=2.5e+02 Score=25.65 Aligned_cols=86 Identities=8% Similarity=0.057 Sum_probs=53.7
Q ss_pred CCCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 021587 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (310)
Q Consensus 109 ~~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~ 188 (310)
..+||+|-+-++.....||-++.+.- ..+++|.+ |+.... + +
T Consensus 104 ~~~ri~vl~Sg~g~nl~~ll~~~~~g-~l~~~I~~--Visn~~----------------~------------~------- 145 (302)
T 3o1l_A 104 QKKRVVLMASRESHCLADLLHRWHSD-ELDCDIAC--VISNHQ----------------D------------L------- 145 (302)
T ss_dssp SCCEEEEEECSCCHHHHHHHHHHHTT-CSCSEEEE--EEESSS----------------T------------T-------
T ss_pred CCcEEEEEEeCCchhHHHHHHHHHCC-CCCcEEEE--EEECcH----------------H------------H-------
Confidence 45789999999888989988876432 23455544 443210 0 0
Q ss_pred HHHhhcCCCcEEEEEEEc-CC--hHHHHHHHhccCCCCEEEECCCCC
Q 021587 189 LDTCSQSKVMVDTVLIES-DL--VAKAILDLIPVLNIRKLVVGTTKS 232 (310)
Q Consensus 189 ~~~~~~~gV~ve~~vveG-~~--~aeaIve~A~e~~aDLIVMGSrG~ 232 (310)
...+++.|+.+...-... .. -.+++++..+++++|+||+..-++
T Consensus 146 ~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~DliVlagym~ 192 (302)
T 3o1l_A 146 RSMVEWHDIPYYHVPVDPKDKEPAFAEVSRLVGHHQADVVVLARYMQ 192 (302)
T ss_dssp HHHHHTTTCCEEECCCCSSCCHHHHHHHHHHHHHTTCSEEEESSCCS
T ss_pred HHHHHHcCCCEEEcCCCcCCHHHHHHHHHHHHHHhCCCEEEHhHhhh
Confidence 012455677765321111 11 125788999999999999988765
No 89
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=29.07 E-value=2.1e+02 Score=25.87 Aligned_cols=86 Identities=9% Similarity=0.114 Sum_probs=53.2
Q ss_pred CCCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 021587 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (310)
Q Consensus 109 ~~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~ 188 (310)
...||+|-+-++.+...+|-++.+.- ..+++|.+ |+.... + ++
T Consensus 89 ~~~ri~vl~Sg~g~~l~~ll~~~~~g-~l~~~i~~--Visn~~------~----------------------~~------ 131 (286)
T 3n0v_A 89 HRPKVVIMVSKADHCLNDLLYRQRIG-QLGMDVVA--VVSNHP------D----------------------LE------ 131 (286)
T ss_dssp CCCEEEEEESSCCHHHHHHHHHHHTT-SSCCEEEE--EEESSS------T----------------------TH------
T ss_pred CCcEEEEEEeCCCCCHHHHHHHHHCC-CCCcEEEE--EEeCcH------H----------------------HH------
Confidence 46789999999989999998886432 23455544 443221 0 00
Q ss_pred HHHhhcCCCcEEEEEEEcCC---hHHHHHHHhccCCCCEEEECCCCC
Q 021587 189 LDTCSQSKVMVDTVLIESDL---VAKAILDLIPVLNIRKLVVGTTKS 232 (310)
Q Consensus 189 ~~~~~~~gV~ve~~vveG~~---~aeaIve~A~e~~aDLIVMGSrG~ 232 (310)
..+++.|+.+...-..... -.+++++..+++++|+||+..-++
T Consensus 132 -~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~Dlivla~y~~ 177 (286)
T 3n0v_A 132 -PLAHWHKIPYYHFALDPKDKPGQERKVLQVIEETGAELVILARYMQ 177 (286)
T ss_dssp -HHHHHTTCCEEECCCBTTBHHHHHHHHHHHHHHHTCSEEEESSCCS
T ss_pred -HHHHHcCCCEEEeCCCcCCHHHHHHHHHHHHHhcCCCEEEeccccc
Confidence 1244567776532111111 124788999999999999988765
No 90
>3tvs_A Cryptochrome-1; circadian clock light entrainment, jetlag, phosphorylation, gene regulation, signaling protein; HET: TPO FAD; 2.30A {Drosophila melanogaster} PDB: 4gu5_A*
Probab=28.72 E-value=87 Score=31.07 Aligned_cols=85 Identities=14% Similarity=0.144 Sum_probs=49.8
Q ss_pred HHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcC---CCcEEE
Q 021587 125 DALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLDTCSQS---KVMVDT 201 (310)
Q Consensus 125 ~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~~~~~~~~---gV~ve~ 201 (310)
.||..|++.+. .+..|+.|.|+++... +. + ...... ..=..+-|..+.+.+++. |...
T Consensus 20 ~AL~~A~~~~~-~g~~vl~vfi~dp~~~-----~~-~--~~~~~r--------~~Fl~~sL~~L~~~L~~~~~~G~~L-- 80 (538)
T 3tvs_A 20 PALLAALADKD-QGIALIPVFIFDGESA-----GT-K--NVGYNR--------MRFLLDSLQDIDDQLQAATDGRGRL-- 80 (538)
T ss_dssp HHHHTTTGGGT-TTCBCCEEEEECSSSS-----CS-T--TCCHHH--------HHHHHHHHHHHHHHGGGSCSSSSCC--
T ss_pred HHHHHHHHhCC-CCCCEEEEEecChhhh-----cc-C--CCCHHH--------HHHHHHHHHHHHHHHHHhhcCCCeE--
Confidence 45665655442 3448999999986432 10 0 011111 112334455555556655 6543
Q ss_pred EEEEcCChHHHHHHHhccCCCCEEEECC
Q 021587 202 VLIESDLVAKAILDLIPVLNIRKLVVGT 229 (310)
Q Consensus 202 ~vveG~~~aeaIve~A~e~~aDLIVMGS 229 (310)
++..|+ +.+.|.+++++++|+.|+.-.
T Consensus 81 ~v~~G~-~~~vl~~L~~~~~a~~V~~n~ 107 (538)
T 3tvs_A 81 LVFEGE-PAYIFRRLHEQVRLHRICIEQ 107 (538)
T ss_dssp EEEESC-HHHHHHHHHHHHCEEEECEEC
T ss_pred EEEeCC-HHHHHHHHHHHcCCCEEEEcc
Confidence 345665 589999999999999998743
No 91
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=28.39 E-value=2.6e+02 Score=25.36 Aligned_cols=86 Identities=10% Similarity=0.091 Sum_probs=53.8
Q ss_pred CCCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 021587 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKF 188 (310)
Q Consensus 109 ~~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~ 188 (310)
..+||+|-+-++.+...+|-++.+.- ...++|.+ |+.... + ++
T Consensus 94 ~~~ri~vl~Sg~g~~l~~ll~~~~~g-~l~~~i~~--Visn~~------~----------------------~~------ 136 (292)
T 3lou_A 94 ARPKVLIMVSKLEHCLADLLFRWKMG-ELKMDIVG--IVSNHP------D----------------------FA------ 136 (292)
T ss_dssp SCCEEEEEECSCCHHHHHHHHHHHHT-SSCCEEEE--EEESSS------T----------------------TH------
T ss_pred CCCEEEEEEcCCCcCHHHHHHHHHcC-CCCcEEEE--EEeCcH------H----------------------HH------
Confidence 45789999999989999998886543 23455544 443321 0 00
Q ss_pred HHHhhcCCCcEEEEEEEcCC---hHHHHHHHhccCCCCEEEECCCCC
Q 021587 189 LDTCSQSKVMVDTVLIESDL---VAKAILDLIPVLNIRKLVVGTTKS 232 (310)
Q Consensus 189 ~~~~~~~gV~ve~~vveG~~---~aeaIve~A~e~~aDLIVMGSrG~ 232 (310)
..+++.|+.+...-..... -.+++++..+++++|+||+..-++
T Consensus 137 -~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~Dlivla~y~~ 182 (292)
T 3lou_A 137 -PLAAQHGLPFRHFPITADTKAQQEAQWLDVFETSGAELVILARYMQ 182 (292)
T ss_dssp -HHHHHTTCCEEECCCCSSCHHHHHHHHHHHHHHHTCSEEEESSCCS
T ss_pred -HHHHHcCCCEEEeCCCcCCHHHHHHHHHHHHHHhCCCEEEecCchh
Confidence 1244567776532111111 124788999999999999988765
No 92
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=28.07 E-value=27 Score=28.75 Aligned_cols=54 Identities=19% Similarity=0.114 Sum_probs=33.3
Q ss_pred ChHHHHHHHhccCCCCEEEECCC----CC-CchhhhhcccCCCCcHHHHHHhhCCCCceEEEEcCCc
Q 021587 208 LVAKAILDLIPVLNIRKLVVGTT----KS-SLRVLRKSKSGRISGMADHILQTAPETCEIKVVCEGK 269 (310)
Q Consensus 208 ~~aeaIve~A~e~~aDLIVMGSr----G~-g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV~~~k 269 (310)
...+.|.+++++++++.||||-- |. +.. ..+ .-.++..+.+..+ +||..|.+..
T Consensus 42 ~~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~-~~~-----ar~f~~~L~~~~~--lpV~~vDEr~ 100 (150)
T 1vhx_A 42 YGLSRLSELIKDYTIDKIVLGFPKNMNGTVGPR-GEA-----SQTFAKVLETTYN--VPVVLWDERL 100 (150)
T ss_dssp CCHHHHHHHHTTSEEEEEEEECCCCBTTBCCHH-HHH-----HHHHHHHHHHHHC--SCEEEECCSS
T ss_pred HHHHHHHHHHHHcCCCEEEEeeeecCCcchhHH-HHH-----HHHHHHHHHHhhC--CCEEEecCCC
Confidence 35789999999999999999933 21 210 110 0112445554444 8998887644
No 93
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=27.66 E-value=1.6e+02 Score=25.67 Aligned_cols=33 Identities=9% Similarity=-0.134 Sum_probs=25.4
Q ss_pred CEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEe
Q 021587 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVF 147 (310)
Q Consensus 111 ~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi 147 (310)
++|+|++-|...|.-.|..+.+.. ..|.++|+-
T Consensus 46 ~~v~va~SGG~DS~vLL~ll~~~~----~~v~vv~id 78 (252)
T 2o8v_A 46 GEYVLSSSFGIQAAVSLHLVNQIR----PDIPVILTD 78 (252)
T ss_dssp SCEEEECCCSTTHHHHHHHHHHHS----TTCEEEECC
T ss_pred CCEEEEeCCCHHHHHHHHHHHHhC----CCCeEEEec
Confidence 479999999999998887776654 356777764
No 94
>1v6t_A Hypothetical UPF0271 protein PH0986; TIM-barrel, lactam utilization protein, structural genomics; 1.70A {Pyrococcus horikoshii} SCOP: c.6.2.5
Probab=27.38 E-value=1.7e+02 Score=26.46 Aligned_cols=55 Identities=11% Similarity=0.076 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCcEEEEEEEc---------CChHHHHHHHhccCCCCEEEECCCCC
Q 021587 178 TGKRRQLLQKFLDTCSQSKVMVDTVLIES---------DLVAKAILDLIPVLNIRKLVVGTTKS 232 (310)
Q Consensus 178 ~e~a~elL~~~~~~~~~~gV~ve~~vveG---------~~~aeaIve~A~e~~aDLIVMGSrG~ 232 (310)
.......+..+..+|+..|.++..+--+| ...+++|++.++..+.+|++||-.|.
T Consensus 84 ~~~v~YQiGAL~a~a~~~G~~l~hVKPHGALYN~~~~d~~~A~av~~av~~~d~~L~l~~l~gs 147 (255)
T 1v6t_A 84 RNYILYQVGALYAFAKAEGLELQHVKPHGALYNAMVKEEDLARAVIEGILDFDKDLILVTLSNS 147 (255)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEECCCHHHHHHHHHCHHHHHHHHHHHHHHCTTCEEEEETTC
T ss_pred HHHHHHHHHHHHHHHHHcCCEeEEeccCHHHHHHHhhCHHHHHHHHHHHHHhCCCcEEEecCCh
Confidence 34455556677778888898887544343 34688999999999999999996654
No 95
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=25.52 E-value=60 Score=27.88 Aligned_cols=35 Identities=17% Similarity=0.120 Sum_probs=27.2
Q ss_pred CCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEE
Q 021587 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIH 145 (310)
Q Consensus 110 ~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVH 145 (310)
.+||+|+|-|+-.+.++++++-.+ ++.+.+|+++-
T Consensus 8 ~k~IllgvTGs~aa~k~~~l~~~L-~~~g~~V~vv~ 42 (194)
T 1p3y_1 8 DKKLLIGICGSISSVGISSYLLYF-KSFFKEIRVVM 42 (194)
T ss_dssp GCEEEEEECSCGGGGGTHHHHHHH-TTTSSEEEEEE
T ss_pred CCEEEEEEECHHHHHHHHHHHHHH-HHCCCEEEEEE
Confidence 479999999999999998877655 44677766553
No 96
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=24.24 E-value=53 Score=28.51 Aligned_cols=37 Identities=11% Similarity=0.039 Sum_probs=26.4
Q ss_pred CCCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEE
Q 021587 109 EEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIH 145 (310)
Q Consensus 109 ~~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVH 145 (310)
..+||+|+|-|+-.+.++++++-.+.+..+.+|+++-
T Consensus 18 ~~k~IllgvTGsiaa~k~~~lv~~L~~~~g~~V~vv~ 54 (206)
T 1qzu_A 18 RKFHVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVT 54 (206)
T ss_dssp SSEEEEEEECSSGGGGTHHHHHHHHC---CEEEEEEE
T ss_pred CCCEEEEEEeChHHHHHHHHHHHHHhcccCCEEEEEE
Confidence 3579999999999999998877655331576666654
No 97
>2o2z_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, NAD-binding protein; HET: NAD; 2.60A {Bacillus halodurans} PDB: 2hzb_A
Probab=23.89 E-value=1.8e+02 Score=27.10 Aligned_cols=64 Identities=16% Similarity=0.269 Sum_probs=42.5
Q ss_pred CcEEEEEEEcC--ChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEEEcCC
Q 021587 197 VMVDTVLIESD--LVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKVVCEG 268 (310)
Q Consensus 197 V~ve~~vveG~--~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV~~~ 268 (310)
..++.+.+.+. .+....+++++ ++|+||+|-...-.+.+-.+ ++..+.+.+ +.++ |+++.|++-
T Consensus 154 ~~i~~v~~~p~~~~~~p~~l~AI~--~AD~IvlgPGS~~TSI~P~L---lv~gi~~Ai-~~s~--A~kV~v~Nl 219 (323)
T 2o2z_A 154 KKIKRVFLTPKDTKPLREGLEAIR--KADVIVIGPGSLYTSVLPNL---LVPGICEAI-KQST--ARKVYICNV 219 (323)
T ss_dssp SCEEEEEEESTTCCCCHHHHHHHH--HCSEEEECSSCTTTTHHHHH---TSTTHHHHH-HHCC--SEEEEECCS
T ss_pred CCceEEEEeCCCCCCCHHHHHHHH--hCCEEEECCCCCHHHhcccc---cCchHHHHH-HhCC--CCEEEEcCC
Confidence 45666666543 34566777766 48999999876522223344 677788875 5566 999999986
No 98
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=22.66 E-value=58 Score=29.14 Aligned_cols=32 Identities=6% Similarity=0.172 Sum_probs=23.1
Q ss_pred CCCCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEE
Q 021587 108 QEEDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHV 146 (310)
Q Consensus 108 ~~~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHV 146 (310)
..-++|++++|.++ .+++.|++ .++.+++.|=
T Consensus 36 ~~V~~I~~alD~t~---~vi~eAi~----~gadlIitHH 67 (267)
T 2fyw_A 36 KGIQRVMVALDIRE---ETVAEAIE----KGVDLIIVKH 67 (267)
T ss_dssp SBCSEEEEESCCCH---HHHHHHHH----TTCSEEEESS
T ss_pred CccCEEEEEEcCCH---HHHHHHHH----CCCCEEEECC
Confidence 46689999999975 44555543 5788888773
No 99
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=22.46 E-value=4e+02 Score=23.40 Aligned_cols=95 Identities=12% Similarity=0.092 Sum_probs=49.6
Q ss_pred CEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 021587 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLD 190 (310)
Q Consensus 111 ~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~~~ 190 (310)
.|++|.+.|...|--|+-+|.+ .+-+|+.|+..-+... ...... ... ++.+..
T Consensus 5 MKvvvl~SGGkDSs~al~~l~~----~G~eV~~L~~~~~~~~----~s~~~h-~~~------------------~e~a~~ 57 (237)
T 3rjz_A 5 ADVAVLYSGGKDSNYALYWAIK----NRFSVKFLVTMVSENE----ESYMYH-TIN------------------ANLTDL 57 (237)
T ss_dssp SEEEEECCSSHHHHHHHHHHHH----TTCEEEEEEEEECC-------------CCS------------------SSHHHH
T ss_pred CEEEEEecCcHHHHHHHHHHHH----cCCeEEEEEEEcCCCC----CccccC-Ccc------------------HHHHHH
Confidence 5899999999999977776653 4567776654422110 000000 000 011112
Q ss_pred HhhcCCCcEEEEEEEcC--ChHHHHHHHhccCCCCEEEECCCCC
Q 021587 191 TCSQSKVMVDTVLIESD--LVAKAILDLIPVLNIRKLVVGTTKS 232 (310)
Q Consensus 191 ~~~~~gV~ve~~vveG~--~~aeaIve~A~e~~aDLIVMGSrG~ 232 (310)
.|+..|+....+-+.|. .-.+.+.++.++.+++.+|.|.--.
T Consensus 58 ~A~~LGIpl~~v~~~g~~~~e~e~l~~~l~~~~i~~vv~Gdi~s 101 (237)
T 3rjz_A 58 QARALGIPLVKGFTQGEKEKEVEDLKRVLSGLKIQGIVAGALAS 101 (237)
T ss_dssp HHHHHTCCEEEEEC------CHHHHHHHHTTSCCSEEECC---C
T ss_pred HHHHcCCCEEEEECCCCchHHHHHHHHHHHhcCCcEEEECCcch
Confidence 23444666554434332 1146677777778999999998643
No 100
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=22.14 E-value=3.8e+02 Score=23.08 Aligned_cols=86 Identities=8% Similarity=0.032 Sum_probs=52.6
Q ss_pred CEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEEEecCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 021587 111 DIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIHVFPQVKFVPSPLGKLPRNQVNPEQLETFMAQETGKRRQLLQKFLD 190 (310)
Q Consensus 111 ~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVHVi~~~~~ip~~~g~ip~~~~~~e~~e~~~~~~~e~a~elL~~~~~ 190 (310)
+||.|=+.|+-....||-.+.+.- ...++|.+|-.-.+. . ..++
T Consensus 3 ~riavl~Sg~Gsnl~ali~~~~~~-~l~~eI~~Visn~~~-------a----------------------------~v~~ 46 (211)
T 3p9x_A 3 KRVAIFASGSGTNAEAIIQSQKAG-QLPCEVALLITDKPG-------A----------------------------KVVE 46 (211)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHTT-CCSSEEEEEEESCSS-------S----------------------------HHHH
T ss_pred CEEEEEEeCCchHHHHHHHHHHcC-CCCcEEEEEEECCCC-------c----------------------------HHHH
Confidence 589998899888888888876432 234566554432110 0 1223
Q ss_pred HhhcCCCcEEEEEEEc-CC---hHHHHHHHhccCCCCEEEECCCCC
Q 021587 191 TCSQSKVMVDTVLIES-DL---VAKAILDLIPVLNIRKLVVGTTKS 232 (310)
Q Consensus 191 ~~~~~gV~ve~~vveG-~~---~aeaIve~A~e~~aDLIVMGSrG~ 232 (310)
.|++.|+.+...-... .. -.+++++..+++++|+||+-.-++
T Consensus 47 ~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~Dliv~agy~~ 92 (211)
T 3p9x_A 47 RVKVHEIPVCALDPKTYPSKEAYEIEVVQQLKEKQIDFVVLAGYMR 92 (211)
T ss_dssp HHHTTTCCEEECCGGGSSSHHHHHHHHHHHHHHTTCCEEEESSCCS
T ss_pred HHHHcCCCEEEeChhhcCchhhhHHHHHHHHHhcCCCEEEEeCchh
Confidence 4556677764211110 11 125788889999999999988765
No 101
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=21.89 E-value=1.5e+02 Score=24.28 Aligned_cols=41 Identities=15% Similarity=0.105 Sum_probs=26.2
Q ss_pred hhcCCCcEEEEEEEcCChHHHHHHH----hccCCCCEEEE-CCCCCC
Q 021587 192 CSQSKVMVDTVLIESDLVAKAILDL----IPVLNIRKLVV-GTTKSS 233 (310)
Q Consensus 192 ~~~~gV~ve~~vveG~~~aeaIve~----A~e~~aDLIVM-GSrG~g 233 (310)
+.+.|+++....+.+|+ .+.|.+. ....++|+||. |--|.+
T Consensus 49 L~~~G~~v~~~~iV~Dd-~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 49 LIENGHKIIGYSLVPDD-KIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp HHHTTCEEEEEEEECSC-HHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred HHHCCCEEEEEEEeCCC-HHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 44568888877777887 4555443 33457898876 444544
No 102
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=21.82 E-value=89 Score=24.21 Aligned_cols=59 Identities=10% Similarity=0.008 Sum_probs=30.8
Q ss_pred HHhhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEEEcC
Q 021587 190 DTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKVVCE 267 (310)
Q Consensus 190 ~~~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV~~ 267 (310)
+.+++.|++++..-..-.. +-+.++ ++|+|++|-+=+.. +..+ ......- .+||.+++.
T Consensus 28 ~~a~~~gi~v~i~a~~~~~----~~~~~~--~~DvvLLgPQV~y~--~~~i---------k~~~~~~--~ipV~vI~~ 86 (108)
T 3nbm_A 28 EGANLTEVRVIANSGAYGA----HYDIMG--VYDLIILAPQVRSY--YREM---------KVDAERL--GIQIVATRG 86 (108)
T ss_dssp HHHHHHTCSEEEEEEETTS----CTTTGG--GCSEEEECGGGGGG--HHHH---------HHHHTTT--TCEEEECCH
T ss_pred HHHHHCCCceEEEEcchHH----HHhhcc--CCCEEEEChHHHHH--HHHH---------HHHhhhc--CCcEEEeCH
Confidence 3344457877754332111 222333 58999999884433 2332 1222222 389988864
No 103
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=21.54 E-value=2.7e+02 Score=21.14 Aligned_cols=50 Identities=8% Similarity=0.041 Sum_probs=28.4
Q ss_pred HHHHHHHhccC--CCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEEEcCCc
Q 021587 210 AKAILDLIPVL--NIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKVVCEGK 269 (310)
Q Consensus 210 aeaIve~A~e~--~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV~~~k 269 (310)
.+..++.+.+. .+|+|++.-.-.+. ..+ .+...+-+..+ .+||+++....
T Consensus 70 ~~~al~~l~~~~~~~dliilD~~l~~~---~g~------~~~~~lr~~~~-~~~ii~ls~~~ 121 (157)
T 3hzh_A 70 GEEAVIKYKNHYPNIDIVTLXITMPKM---DGI------TCLSNIMEFDK-NARVIMISALG 121 (157)
T ss_dssp HHHHHHHHHHHGGGCCEEEECSSCSSS---CHH------HHHHHHHHHCT-TCCEEEEESCC
T ss_pred HHHHHHHHHhcCCCCCEEEEeccCCCc---cHH------HHHHHHHhhCC-CCcEEEEeccC
Confidence 45555666666 79999998763322 111 11233433333 48888886543
No 104
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=21.38 E-value=3.3e+02 Score=23.13 Aligned_cols=47 Identities=11% Similarity=0.092 Sum_probs=25.5
Q ss_pred HHHHHHHHhhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCC
Q 021587 184 LLQKFLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTT 230 (310)
Q Consensus 184 lL~~~~~~~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSr 230 (310)
+++.+.+.+.+.|+.+.........-...+++.....++|-||+-..
T Consensus 28 ~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~ 74 (294)
T 3qk7_A 28 MISWIGIELGKRGLDLLLIPDEPGEKYQSLIHLVETRRVDALIVAHT 74 (294)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECTTCCCHHHHHHHHHTCCSEEEECSC
T ss_pred HHHHHHHHHHHCCCEEEEEeCCChhhHHHHHHHHHcCCCCEEEEeCC
Confidence 33444445555676655433322222356667666777887777544
No 105
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=20.98 E-value=4.4e+02 Score=23.75 Aligned_cols=47 Identities=13% Similarity=0.145 Sum_probs=25.2
Q ss_pred HHHHHHHHHhhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCCCC
Q 021587 183 QLLQKFLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKS 232 (310)
Q Consensus 183 elL~~~~~~~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~ 232 (310)
++.+.+.+.+.+.|++++..-+...+ ...+.+... ++|.||+|+.-.
T Consensus 272 ~la~~i~~~l~~~g~~v~~~~~~~~~-~~~~~~~l~--~~d~iiigsP~y 318 (404)
T 2ohh_A 272 KMAHAIAEGAMSEGVDVRVYCLHEDD-RSEIVKDIL--ESGAIALGAPTI 318 (404)
T ss_dssp HHHHHHHHHHHTTTCEEEEEETTTSC-HHHHHHHHH--TCSEEEEECCEE
T ss_pred HHHHHHHHHHHhCCCeEEEEECCCCC-HHHHHHHHH--HCCEEEEECccc
Confidence 34444444455556666543322222 344444333 589999999843
No 106
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=20.94 E-value=1.1e+02 Score=24.62 Aligned_cols=41 Identities=20% Similarity=0.261 Sum_probs=22.8
Q ss_pred HhhcCCCcEEEEEEEcC-ChHHHHHHHhccCCCCEEEECCCCCCc
Q 021587 191 TCSQSKVMVDTVLIESD-LVAKAILDLIPVLNIRKLVVGTTKSSL 234 (310)
Q Consensus 191 ~~~~~gV~ve~~vveG~-~~aeaIve~A~e~~aDLIVMGSrG~g~ 234 (310)
.+.+.|+.++..-+... + ...|+.... ++|+||+|+.-.+.
T Consensus 28 ~l~~~g~~v~~~~~~~~~~-~~~~~~~~~--~~d~ii~Gspty~g 69 (159)
T 3fni_A 28 GITKTGVGVDVVDLGAAVD-LQELRELVG--RCTGLVIGMSPAAS 69 (159)
T ss_dssp HHHHTTCEEEEEESSSCCC-HHHHHHHHH--TEEEEEEECCBTTS
T ss_pred HHHHCCCeEEEEECcCcCC-HHHHHHHHH--hCCEEEEEcCcCCC
Confidence 33445776654333222 3 344444333 47999999986643
No 107
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=20.79 E-value=80 Score=27.25 Aligned_cols=35 Identities=9% Similarity=0.009 Sum_probs=26.3
Q ss_pred CCEEEEeecCCHHHH-HHHHHHHHHhcCCCCEEEEEE
Q 021587 110 EDIIYVAVGKSQSSM-DALSWTLRHAVNPSTLIFLIH 145 (310)
Q Consensus 110 ~~kILVAVDgSe~S~-~AL~wAl~lA~~~ga~L~LVH 145 (310)
.+||+|+|-|+-.+. ++++..-.+. +.+.+|+++-
T Consensus 7 ~k~I~lgiTGs~aa~~k~~~ll~~L~-~~g~eV~vv~ 42 (201)
T 3lqk_A 7 GKHVGFGLTGSHCTYHEVLPQMERLV-ELGAKVTPFV 42 (201)
T ss_dssp TCEEEEECCSCGGGGGGTHHHHHHHH-HTTCEEEEEC
T ss_pred CCEEEEEEEChHHHHHHHHHHHHHHh-hCCCEEEEEE
Confidence 479999999998888 8888775554 3577766553
No 108
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=20.75 E-value=1.5e+02 Score=26.86 Aligned_cols=72 Identities=6% Similarity=0.090 Sum_probs=35.6
Q ss_pred HHHhhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhC-CCCceEEEEcC
Q 021587 189 LDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTA-PETCEIKVVCE 267 (310)
Q Consensus 189 ~~~~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~A-p~~CpVlVV~~ 267 (310)
...+.+.++.+.........-+..+++.+...++|+||+. -|.|. +. .++..+++.. ...+|+.++|-
T Consensus 50 ~~~l~~~g~~~~~~~t~~~~~~~~~~~~~~~~~~d~vvv~-GGDGT--l~--------~v~~~l~~~~~~~~~plgiiP~ 118 (332)
T 2bon_A 50 IMLLREEGMTIHVRVTWEKGDAARYVEEARKFGVATVIAG-GGDGT--IN--------EVSTALIQCEGDDIPALGILPL 118 (332)
T ss_dssp HHHHHTTTCCEEEEECCSTTHHHHHHHHHHHHTCSEEEEE-ESHHH--HH--------HHHHHHHHCCSSCCCEEEEEEC
T ss_pred HHHHHHcCCcEEEEEecCcchHHHHHHHHHhcCCCEEEEE-ccchH--HH--------HHHHHHhhcccCCCCeEEEecC
Confidence 3344556777664443322223444444434467866542 13344 22 2355555321 12378888887
Q ss_pred Cccc
Q 021587 268 GKEV 271 (310)
Q Consensus 268 ~k~v 271 (310)
|..=
T Consensus 119 Gt~N 122 (332)
T 2bon_A 119 GTAN 122 (332)
T ss_dssp SSSC
T ss_pred cCHH
Confidence 7644
No 109
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=20.65 E-value=1e+02 Score=26.80 Aligned_cols=34 Identities=6% Similarity=-0.055 Sum_probs=25.9
Q ss_pred CCEEEEeecCCHHHHHHHHHHHHHhcCCCCEEEEEE
Q 021587 110 EDIIYVAVGKSQSSMDALSWTLRHAVNPSTLIFLIH 145 (310)
Q Consensus 110 ~~kILVAVDgSe~S~~AL~wAl~lA~~~ga~L~LVH 145 (310)
.+||+|+|-|+-.+.++++++-.+. +.+ +|++|-
T Consensus 19 ~k~IllgvTGsiaa~k~~~ll~~L~-~~g-~V~vv~ 52 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIKFGNLCHCFT-EWA-EVRAVV 52 (209)
T ss_dssp CCEEEEEECSSGGGGGHHHHHHHHH-TTS-EEEEEE
T ss_pred CCEEEEEEeCcHHHHHHHHHHHHHh-cCC-CEEEEE
Confidence 4799999999999999988776654 445 665554
No 110
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=20.63 E-value=1.3e+02 Score=27.04 Aligned_cols=70 Identities=4% Similarity=-0.024 Sum_probs=36.2
Q ss_pred HHHHhhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEEEcC
Q 021587 188 FLDTCSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKVVCE 267 (310)
Q Consensus 188 ~~~~~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV~~ 267 (310)
+...+.+.++.++....+...-+..+++.+.+ ++|+||+. -|.|. +.. |++.++... ..+|+.++|-
T Consensus 31 i~~~l~~~~~~~~~~~t~~~~~a~~~~~~~~~-~~d~vv~~-GGDGT--l~~--------v~~~l~~~~-~~~~l~iiP~ 97 (304)
T 3s40_A 31 IVPPLAAAFPDLHILHTKEQGDATKYCQEFAS-KVDLIIVF-GGDGT--VFE--------CTNGLAPLE-IRPTLAIIPG 97 (304)
T ss_dssp HHHHHHHHCSEEEEEECCSTTHHHHHHHHHTT-TCSEEEEE-ECHHH--HHH--------HHHHHTTCS-SCCEEEEEEC
T ss_pred HHHHHHHcCCeEEEEEccCcchHHHHHHHhhc-CCCEEEEE-ccchH--HHH--------HHHHHhhCC-CCCcEEEecC
Confidence 33344444666665544443335666665544 77866553 23344 222 244444321 2378888887
Q ss_pred Ccc
Q 021587 268 GKE 270 (310)
Q Consensus 268 ~k~ 270 (310)
|.-
T Consensus 98 Gt~ 100 (304)
T 3s40_A 98 GTC 100 (304)
T ss_dssp SSC
T ss_pred CcH
Confidence 653
No 111
>1to6_A Glycerate kinase; glycerate metabolism, structural genomics T831, PSI, protein structure initiative; 2.50A {Neisseria meningitidis serogroup A} SCOP: c.141.1.1
Probab=20.54 E-value=88 Score=29.83 Aligned_cols=43 Identities=9% Similarity=0.213 Sum_probs=32.9
Q ss_pred CCCCEEEECCCCCCchhhhhcccCCCCcHHHHHHhhCCCCceEEEEcCCc
Q 021587 220 LNIRKLVVGTTKSSLRVLRKSKSGRISGMADHILQTAPETCEIKVVCEGK 269 (310)
Q Consensus 220 ~~aDLIVMGSrG~g~~~l~r~~s~llGSVA~~Vl~~Ap~~CpVlVV~~~k 269 (310)
.++||||.|--..-. +. +.|.+...|.+.|+...||++++-..
T Consensus 277 ~~ADLVITGEG~~D~---QT----~~GK~p~gVa~~A~~~~PviaiaG~~ 319 (371)
T 1to6_A 277 SDVDLVIVGEGRLDR---QS----LAGKAPIGVAKRTPVGVPVVAICGSL 319 (371)
T ss_dssp TTCSEEEECCSEECS---TT----TTTCHHHHHHTTSCTTCCEEEEESEE
T ss_pred cCCCEEEECCCCCCC---CC----CCCcHHHHHHHHHhcCCCEEEEeCCC
Confidence 479999999865432 22 47899999999887679999998543
No 112
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=20.42 E-value=94 Score=26.21 Aligned_cols=47 Identities=13% Similarity=-0.113 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhhcCCCcEEEEEEE-cCChHHHHHHHhccCCCCEEEECCCC
Q 021587 182 RQLLQKFLDTCSQSKVMVDTVLIE-SDLVAKAILDLIPVLNIRKLVVGTTK 231 (310)
Q Consensus 182 ~elL~~~~~~~~~~gV~ve~~vve-G~~~aeaIve~A~e~~aDLIVMGSrG 231 (310)
+.+++.+.+.+++.|.+++.+-+. +.+ .+.+.+... .+|.||+++.-
T Consensus 33 ~~l~~~~~~~~~~~g~~v~~~dL~~~~d-~~~~~~~l~--~AD~iV~~~P~ 80 (204)
T 2amj_A 33 DTLTEVADGTLRDLGHDVRIVRADSDYD-VKAEVQNFL--WADVVIWQMPG 80 (204)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESSSCCC-HHHHHHHHH--HCSEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEEEeCCcccc-HHHHHHHHH--hCCEEEEECCc
Confidence 344555555555557777654443 334 455555544 48999999974
No 113
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=20.39 E-value=1.4e+02 Score=23.93 Aligned_cols=39 Identities=21% Similarity=0.339 Sum_probs=21.6
Q ss_pred hhcCCCcEEEEEEEcCChHHHHHHHhccCCCCEEEECCCCCC
Q 021587 192 CSQSKVMVDTVLIESDLVAKAILDLIPVLNIRKLVVGTTKSS 233 (310)
Q Consensus 192 ~~~~gV~ve~~vveG~~~aeaIve~A~e~~aDLIVMGSrG~g 233 (310)
+...|+.++..-+...+ ...++..+. ++|+||+|+.-.+
T Consensus 25 l~~~g~~v~~~~~~~~~-~~~~~~~~~--~~d~ii~Gspty~ 63 (161)
T 3hly_A 25 LVKTGVAVEMVDLRAVD-PQELIEAVS--SARGIVLGTPPSQ 63 (161)
T ss_dssp HHHTTCCEEEEETTTCC-HHHHHHHHH--HCSEEEEECCBSS
T ss_pred HHhCCCeEEEEECCCCC-HHHHHHHHH--hCCEEEEEcCCcC
Confidence 34457766543332233 344443332 4799999998653
Done!