Query 021592
Match_columns 310
No_of_seqs 198 out of 1273
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 04:11:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021592.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021592hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 2E-107 4E-112 769.9 24.5 299 7-310 21-324 (324)
2 cd00693 secretory_peroxidase H 100.0 2E-102 4E-107 733.7 25.1 298 10-309 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 5.5E-73 1.2E-77 517.1 9.9 228 27-274 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 1.3E-70 2.9E-75 512.5 21.1 231 25-307 15-257 (289)
5 cd00691 ascorbate_peroxidase A 100.0 1.8E-67 3.8E-72 486.1 19.8 229 22-296 11-252 (253)
6 PLN02364 L-ascorbate peroxidas 100.0 2.1E-66 4.5E-71 477.5 21.5 231 13-295 3-248 (250)
7 PLN02879 L-ascorbate peroxidas 100.0 7.2E-65 1.6E-69 466.7 20.6 219 25-295 18-248 (251)
8 cd00692 ligninase Ligninase an 100.0 7.3E-65 1.6E-69 481.6 20.9 236 23-310 16-287 (328)
9 cd00314 plant_peroxidase_like 100.0 8.6E-60 1.9E-64 435.9 18.1 222 26-291 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 4.6E-59 1E-63 448.8 19.3 267 16-300 35-401 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 1.3E-55 2.8E-60 448.9 20.1 265 16-298 45-406 (716)
12 PRK15061 catalase/hydroperoxid 100.0 1.4E-52 3E-57 424.6 20.3 272 11-300 41-414 (726)
13 cd08201 plant_peroxidase_like_ 100.0 1.7E-51 3.7E-56 378.0 11.7 217 29-291 29-264 (264)
14 cd08200 catalase_peroxidase_2 100.0 2.1E-41 4.5E-46 314.8 17.8 219 29-293 17-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 1.3E-35 2.8E-40 302.7 17.6 220 26-294 429-710 (716)
16 PRK15061 catalase/hydroperoxid 100.0 3.9E-35 8.5E-40 297.8 17.7 220 29-293 442-721 (726)
17 COG0376 KatG Catalase (peroxid 100.0 3.8E-32 8.2E-37 265.1 16.0 251 26-293 71-416 (730)
18 COG0376 KatG Catalase (peroxid 99.5 3.3E-13 7.2E-18 133.1 14.1 216 29-293 452-725 (730)
19 PF11895 DUF3415: Domain of un 55.3 9.8 0.00021 29.4 2.1 18 278-295 3-20 (80)
20 PTZ00411 transaldolase-like pr 44.5 19 0.00041 35.1 2.8 64 104-167 161-230 (333)
21 PRK12346 transaldolase A; Prov 39.8 22 0.00048 34.4 2.5 66 103-168 149-220 (316)
22 PRK01362 putative translaldola 33.2 33 0.00072 31.2 2.4 73 84-172 89-163 (214)
23 KOG0400 40S ribosomal protein 32.1 36 0.00078 28.8 2.2 33 151-183 31-64 (151)
24 TIGR00875 fsa_talC_mipB fructo 31.7 44 0.00096 30.3 2.9 72 84-171 89-162 (213)
25 PF06163 DUF977: Bacterial pro 20.1 1.6E+02 0.0034 24.8 3.8 28 280-307 72-100 (127)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=1.8e-107 Score=769.94 Aligned_cols=299 Identities=46% Similarity=0.811 Sum_probs=283.2
Q ss_pred cccCCCccchhcCChhHHHHHHHHHHHHHhcCchhhhhHHHHHhcccCCCCCCcccccCCCCCCccccCCCCCCCCCchH
Q 021592 7 VSCQLDYKYYDDTCPSLTRIVRYGVWSAISNETRMAASLLRLHFHDCFVKGCDGSVLLDDTSTTKGEKNAFPNRNSARGF 86 (310)
Q Consensus 7 ~~~~l~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSill~~~~~~~~E~~~~~N~~~l~g~ 86 (310)
+.++|+++||++|||++|+||+++|++++.++|+++|++|||+||||||+||||||||+++ ..||++++|. +|+||
T Consensus 21 ~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~-~l~Gf 96 (324)
T PLN03030 21 QGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNL-LLRGY 96 (324)
T ss_pred hhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCc-CcchH
Confidence 3467999999999999999999999999999999999999999999999999999999864 3699999998 99999
Q ss_pred HHHHHHHHHHHhhCCCCCChhhHHHHhHHHHHHhcCCCceeecCCCCCCCCCCccccCCCCCCCCCHHHHHHHHHHCCCC
Q 021592 87 EVIDAIKANLEKACPATVSCTDILTLVAREAVFLGGGPFWAVPLGRRDGLTASESEANNLPSPFEPLQNITAKFTARGLD 166 (310)
Q Consensus 87 ~~i~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~Gls 166 (310)
++|+.||++||++||++|||||||||||||||+++|||.|+|++||||+++|....+.+||.|+.++++|++.|+++||+
T Consensus 97 ~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~~LP~p~~~~~~l~~~F~~~Gl~ 176 (324)
T PLN03030 97 DVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDASNLPGFTDSIDVQKQKFAAKGLN 176 (324)
T ss_pred HHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCcccccCCcCCCCCHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999987766558999999999999999999999
Q ss_pred cccceeecccceeeccccccccccccCCCCCC-CCCCCcCHHHHHHhhhcCCCCCCCCCccccccCCcccccchHHHHHh
Q 021592 167 LKDVVVLSGGHTIGFAQCLSFKNRLFDFSGSG-KPDPTLDASLLQSLQSTCPSQADSDTKLVALDSVTTNKFDNIYFQNL 245 (310)
Q Consensus 167 ~~elVaLsGaHtiG~~hc~~f~~Rl~~~~g~~-~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l 245 (310)
.+|||+||||||||++||.+|.+|||||.|++ .+||+||+.|+..|+..|| ..++....++||+.||.+|||+||+||
T Consensus 177 ~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp-~~~~~~~~~~lD~~Tp~~FDn~Yy~nl 255 (324)
T PLN03030 177 TQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCP-QNGDGSRRIALDTGSSNRFDASFFSNL 255 (324)
T ss_pred HHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCC-CCCCCCccccCCCCCCcccccHHHHHH
Confidence 99999999999999999999999999999875 5899999999999999999 333333468899999999999999999
Q ss_pred hhccccccchhhhcCChhHHHHHHHhhcCh----hhHHHHHHHHHHHhHhCCCCCCCCCccccccccCC
Q 021592 246 VNKSGLLQSDQALMGDNRTAAMVQYYSKYP----YFFSKDFGASMVKMANIGVLTGQDGEIRKNCRVVN 310 (310)
Q Consensus 246 ~~~~glL~sD~~L~~d~~t~~~V~~yA~d~----~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n 310 (310)
+.++|+|+|||+|+.|++|+++|++||.|+ +.|+++|++||+||++|+|+||.+|||||+|+++|
T Consensus 256 l~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN 324 (324)
T PLN03030 256 KNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN 324 (324)
T ss_pred HhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence 999999999999999999999999999875 59999999999999999999999999999999998
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=2e-102 Score=733.67 Aligned_cols=298 Identities=56% Similarity=0.947 Sum_probs=286.3
Q ss_pred CCCccchhcCChhHHHHHHHHHHHHHhcCchhhhhHHHHHhcccCCCCCCcccccCCCCCCccccCCCCCCCCCchHHHH
Q 021592 10 QLDYKYYDDTCPSLTRIVRYGVWSAISNETRMAASLLRLHFHDCFVKGCDGSVLLDDTSTTKGEKNAFPNRNSARGFEVI 89 (310)
Q Consensus 10 ~l~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSill~~~~~~~~E~~~~~N~~~l~g~~~i 89 (310)
||+++||++|||++|+||+++|++.+.++++++|++|||+||||||+||||||||+.++++.+|+++++|. +|+||++|
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~-~l~g~~~i 79 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNL-SLRGFDVI 79 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCC-CcchhHHH
Confidence 69999999999999999999999999999999999999999999999999999999887778999999998 99999999
Q ss_pred HHHHHHHHhhCCCCCChhhHHHHhHHHHHHhcCCCceeecCCCCCCCCCCccccCCCCCCCCCHHHHHHHHHHCCCCccc
Q 021592 90 DAIKANLEKACPATVSCTDILTLVAREAVFLGGGPFWAVPLGRRDGLTASESEANNLPSPFEPLQNITAKFTARGLDLKD 169 (310)
Q Consensus 90 ~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~e 169 (310)
+.||+++|++||++||||||||||||+||+++|||.|+|++||+|+.+|.+..+.+||+|+.++++|++.|+++||+++|
T Consensus 80 ~~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~G~~~~d 159 (298)
T cd00693 80 DDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDVGNLPSPFFSVSQLISLFASKGLTVTD 159 (298)
T ss_pred HHHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccccCCCCcccCHHHHHHHHHHcCCCHHH
Confidence 99999999999999999999999999999999999999999999999886654448999999999999999999999999
Q ss_pred ceeecccceeeccccccccccccCCCCCCCCCCCcCHHHHHHhhhcCCCCCCCCCccccccCCcccccchHHHHHhhhcc
Q 021592 170 VVVLSGGHTIGFAQCLSFKNRLFDFSGSGKPDPTLDASLLQSLQSTCPSQADSDTKLVALDSVTTNKFDNIYFQNLVNKS 249 (310)
Q Consensus 170 lVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~~~ 249 (310)
||||+||||||++||.+|.+|||||+|++.+||+||+.|+..|++.|| ..++.+..++||+.||.+|||+||++|+.++
T Consensus 160 ~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp-~~~~~~~~~~lD~~Tp~~FDn~Yy~~l~~~~ 238 (298)
T cd00693 160 LVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCP-AGGDDDTLVPLDPGTPNTFDNSYYKNLLAGR 238 (298)
T ss_pred heeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCC-CCCCCCccccCCCCCCCccccHHHHHHHhcc
Confidence 999999999999999999999999999989999999999999999999 4334456789999999999999999999999
Q ss_pred ccccchhhhcCChhHHHHHHHhhcChhhHHHHHHHHHHHhHhCCCCCCCCCccccccccC
Q 021592 250 GLLQSDQALMGDNRTAAMVQYYSKYPYFFSKDFGASMVKMANIGVLTGQDGEIRKNCRVV 309 (310)
Q Consensus 250 glL~sD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~ 309 (310)
|+|+||++|+.|++|+++|++||.||+.|+++|++||+||++|||+||.+||||++|+++
T Consensus 239 glL~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 239 GLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred cCccCCHHhccCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 999999999999999999999999999999999999999999999999999999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=5.5e-73 Score=517.08 Aligned_cols=228 Identities=53% Similarity=0.880 Sum_probs=208.2
Q ss_pred HHHHHHHHHhcCchhhhhHHHHHhcccCC-CCCCcccccCCCCCCccccCCCCCCCCCc-hHHHHHHHHHHHHhhCCCCC
Q 021592 27 VRYGVWSAISNETRMAASLLRLHFHDCFV-KGCDGSVLLDDTSTTKGEKNAFPNRNSAR-GFEVIDAIKANLEKACPATV 104 (310)
Q Consensus 27 V~~~v~~~~~~~~~~aa~llRL~FHDcfv-~GcDgSill~~~~~~~~E~~~~~N~~~l~-g~~~i~~iK~~le~~cp~~V 104 (310)
||++|++++.++++++|+||||+|||||+ +|||||||+. ..|+++++|. +|+ ++++|+.||+++|++||++|
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~-----~~e~~~~~N~-gl~~~~~~i~~ik~~~~~~cp~~V 74 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLF-----SAEKDAPPNR-GLRDGFDVIDPIKAKLEAACPGVV 74 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGS-----TTGGGSGGGT-THHHHHHHHHHHHHHHCHHSTTTS
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceecc-----cccccccccc-CcceeeechhhHHhhhcccccCCC
Confidence 89999999999999999999999999999 9999999983 3799999999 997 99999999999999999999
Q ss_pred ChhhHHHHhHHHHHHhcCCCceeecCCCCCCCCCCccccCCCCCCCCCHHHHHHHHHHCCCCcccceeecccceeecccc
Q 021592 105 SCTDILTLVAREAVFLGGGPFWAVPLGRRDGLTASESEANNLPSPFEPLQNITAKFTARGLDLKDVVVLSGGHTIGFAQC 184 (310)
Q Consensus 105 ScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~elVaLsGaHtiG~~hc 184 (310)
||||||+||||+||+.+|||.|+|++||+|++++.+.++.+||.|+.++++|++.|+++|||++|||||+||||||++||
T Consensus 75 S~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsGaHTiG~~~c 154 (230)
T PF00141_consen 75 SCADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGASNLPSPTDSVDQLLAFFARKGLSAEEMVALSGAHTIGRAHC 154 (230)
T ss_dssp -HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHHHHSSTTTSHHHHHHHHHHHTT--HHHHHHHHGGGGSTEESG
T ss_pred CHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccchhhhhhhccccchhhhcceeccccccccee
Confidence 99999999999999999999999999999999998865335999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCCcCHHHHHHhhhcCCCCCCCCCccccccCCcccccchHHHHHhhhccccccchhhhcCChhH
Q 021592 185 LSFKNRLFDFSGSGKPDPTLDASLLQSLQSTCPSQADSDTKLVALDSVTTNKFDNIYFQNLVNKSGLLQSDQALMGDNRT 264 (310)
Q Consensus 185 ~~f~~Rl~~~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~~~glL~sD~~L~~d~~t 264 (310)
.+|. ||| + .+||+||+.|+.. .|+ ..+ .+ .+++| ||.+|||+||++|+.++|+|+||++|+.|++|
T Consensus 155 ~~f~-rl~-~----~~dp~~d~~~~~~---~C~-~~~-~~-~~~~d--tp~~fDN~Yy~~ll~~~gll~SD~~L~~d~~t 220 (230)
T PF00141_consen 155 SSFS-RLY-F----PPDPTMDPGYAGQ---NCN-SGG-DN-GVPLD--TPTVFDNSYYKNLLNGRGLLPSDQALLNDPET 220 (230)
T ss_dssp GCTG-GTS-C----SSGTTSTHHHHHH---SSS-TSG-CT-CEESS--STTS-SSHHHHHHHHTEEEEHHHHHHHHSTTH
T ss_pred cccc-ccc-c----cccccccccccee---ccC-CCc-cc-ccccc--CCCcchhHHHHHHhcCCCcCHHHHHHhcCHHH
Confidence 9999 999 5 5699999999988 894 332 22 78899 99999999999999999999999999999999
Q ss_pred HHHHHHhhcC
Q 021592 265 AAMVQYYSKY 274 (310)
Q Consensus 265 ~~~V~~yA~d 274 (310)
+++|++||+|
T Consensus 221 ~~~V~~yA~d 230 (230)
T PF00141_consen 221 RPIVERYAQD 230 (230)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHhcC
Confidence 9999999976
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=1.3e-70 Score=512.45 Aligned_cols=231 Identities=29% Similarity=0.427 Sum_probs=209.2
Q ss_pred HHHHHHHHHHHhcCchhhhhHHHHHhcccC-------CCCCCcccccCCCCCCccccCCCCCCCCC-chHHHHHHHHHHH
Q 021592 25 RIVRYGVWSAISNETRMAASLLRLHFHDCF-------VKGCDGSVLLDDTSTTKGEKNAFPNRNSA-RGFEVIDAIKANL 96 (310)
Q Consensus 25 ~iV~~~v~~~~~~~~~~aa~llRL~FHDcf-------v~GcDgSill~~~~~~~~E~~~~~N~~~l-~g~~~i~~iK~~l 96 (310)
+.++++|.+ +.++|.++|.+|||+||||| ++||||||+++ +|+++++|. +| +||++|++||+++
T Consensus 15 ~~~~~~~~~-~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~------~E~~~~~N~-gL~~g~~vid~iK~~~ 86 (289)
T PLN02608 15 EKARRDLRA-LIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE------EEYSHGANN-GLKIAIDLCEPVKAKH 86 (289)
T ss_pred HHHHHHHHH-HHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc------cccCCcccc-chHHHHHHHHHHHHHc
Confidence 456667744 66799999999999999999 89999999984 599999998 99 6999999999987
Q ss_pred HhhCCCCCChhhHHHHhHHHHHHhcCCCceeecCCCCCCCCCCccccCCCCCCCCCHHHHHHHHHHCCCCcccceeeccc
Q 021592 97 EKACPATVSCTDILTLVAREAVFLGGGPFWAVPLGRRDGLTASESEANNLPSPFEPLQNITAKFTARGLDLKDVVVLSGG 176 (310)
Q Consensus 97 e~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~elVaLsGa 176 (310)
++|||||||+||||+||+.+|||.|+|++||+|++++.+.. +||+|+.+++++++.|+++||+++|||+|+||
T Consensus 87 -----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~--~LP~p~~~~~~l~~~F~~~Gl~~~D~VaLsGA 159 (289)
T PLN02608 87 -----PKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPEEG--RLPDAKKGAKHLRDVFYRMGLSDKDIVALSGG 159 (289)
T ss_pred -----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCccC--CCcCCCCCHHHHHHHHHHcCCCHHHHhhhccc
Confidence 38999999999999999999999999999999999986432 89999999999999999999999999999999
Q ss_pred ceeeccccccccccccCCCCCCCCCCCcCHHHHHHhhhcCCCCCCCCCccccccCCcccccchHHHHHhhhc--ccc--c
Q 021592 177 HTIGFAQCLSFKNRLFDFSGSGKPDPTLDASLLQSLQSTCPSQADSDTKLVALDSVTTNKFDNIYFQNLVNK--SGL--L 252 (310)
Q Consensus 177 HtiG~~hc~~f~~Rl~~~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~~--~gl--L 252 (310)
||||++||. |+ +|.| | | + .||.+|||+||++|+.+ +|+ |
T Consensus 160 HTiG~ahc~----r~-g~~g--------------------~-----~------~-~Tp~~FDN~Yy~~ll~~~~~gll~L 202 (289)
T PLN02608 160 HTLGRAHPE----RS-GFDG--------------------P-----W------T-KEPLKFDNSYFVELLKGESEGLLKL 202 (289)
T ss_pred ccccccccc----CC-CCCC--------------------C-----C------C-CCCCccChHHHHHHHcCCcCCcccc
Confidence 999999994 54 4322 1 1 1 69999999999999998 788 7
Q ss_pred cchhhhcCChhHHHHHHHhhcChhhHHHHHHHHHHHhHhCCCCCCCCCccccccc
Q 021592 253 QSDQALMGDNRTAAMVQYYSKYPYFFSKDFGASMVKMANIGVLTGQDGEIRKNCR 307 (310)
Q Consensus 253 ~sD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~ 307 (310)
+||++|+.|++|+++|+.||.||+.|+++|++||+||++|||+||++||+.+.-+
T Consensus 203 ~SD~~L~~d~~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~~ 257 (289)
T PLN02608 203 PTDKALLEDPEFRPYVELYAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKSTS 257 (289)
T ss_pred ccCHhhhcChhHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCcccccCc
Confidence 9999999999999999999999999999999999999999999999999987543
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=1.8e-67 Score=486.11 Aligned_cols=229 Identities=27% Similarity=0.362 Sum_probs=207.1
Q ss_pred hHHHHHHHHHHHHHhcCchhhhhHHHHHhcccCCCCCCcccccCC---CCCCccccCCCCCCCCC-chHHHHHHHHHHHH
Q 021592 22 SLTRIVRYGVWSAISNETRMAASLLRLHFHDCFVKGCDGSVLLDD---TSTTKGEKNAFPNRNSA-RGFEVIDAIKANLE 97 (310)
Q Consensus 22 ~~e~iV~~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSill~~---~~~~~~E~~~~~N~~~l-~g~~~i~~iK~~le 97 (310)
..++||+++|++.+. +++++|++|||+|||||+ ||+|+++++ +..+.+|+++++|. +| +||++|+.||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~~--~d~s~~~~G~d~s~~~~~E~~~~~N~-~L~~~~~~i~~iK~~~- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSGT--YDKETKTGGSNGTIRFDPELNHGANA-GLDIARKLLEPIKKKY- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHhc--cccccCCCCCCccccchhhcCCcccc-chHHHHHHHHHHHHHc-
Confidence 457899999999999 999999999999999994 777777643 33345799999998 89 8999999999986
Q ss_pred hhCCCCCChhhHHHHhHHHHHHhcCCCceeecCCCCCCCCCCccccC-CCCCCCCCHHHHHHHHHHCCCCcccceeeccc
Q 021592 98 KACPATVSCTDILTLVAREAVFLGGGPFWAVPLGRRDGLTASESEAN-NLPSPFEPLQNITAKFTARGLDLKDVVVLSGG 176 (310)
Q Consensus 98 ~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~-~lP~p~~~~~~l~~~F~~~Gls~~elVaLsGa 176 (310)
| +||||||||||||+||+.+|||.|+|++||+|+.++....++ +||.|+.++++|++.|+++||+++|||+|+||
T Consensus 86 ---~-~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~d~VaLsGa 161 (253)
T cd00691 86 ---P-DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQEIVALSGA 161 (253)
T ss_pred ---C-CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHHHHHHhccc
Confidence 4 899999999999999999999999999999999999877677 89999999999999999999999999999999
Q ss_pred ceeeccccccccccccCCCCCCCCCCCcCHHHHHHhhhcCCCCCCCCCccccccCCcccccchHHHHHhhhccc------
Q 021592 177 HTIGFAQCLSFKNRLFDFSGSGKPDPTLDASLLQSLQSTCPSQADSDTKLVALDSVTTNKFDNIYFQNLVNKSG------ 250 (310)
Q Consensus 177 HtiG~~hc~~f~~Rl~~~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~~~g------ 250 (310)
||||++||.. ++|.|. +. .||.+|||+||++|+.++|
T Consensus 162 HTiG~a~c~~-----~~~~g~-------------------------~~-------~tp~~FDn~Yy~~ll~~~g~~~~~~ 204 (253)
T cd00691 162 HTLGRCHKER-----SGYDGP-------------------------WT-------KNPLKFDNSYFKELLEEDWKLPTPG 204 (253)
T ss_pred ceeecccccC-----CCCCCC-------------------------CC-------CCCCcccHHHHHHHhcCCCccCcCc
Confidence 9999999943 233221 11 5999999999999999999
Q ss_pred --cccchhhhcCChhHHHHHHHhhcChhhHHHHHHHHHHHhHhCCCCC
Q 021592 251 --LLQSDQALMGDNRTAAMVQYYSKYPYFFSKDFGASMVKMANIGVLT 296 (310)
Q Consensus 251 --lL~sD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~t 296 (310)
+|+||++|+.|++|+++|+.||.|++.|+++|++||+||+++||..
T Consensus 205 ~~~L~sD~~L~~d~~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v~~ 252 (253)
T cd00691 205 LLMLPTDKALLEDPKFRPYVELYAKDQDAFFKDYAEAHKKLSELGVPF 252 (253)
T ss_pred ceechhhHHHHcCccHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999999999999999999999999963
No 6
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=2.1e-66 Score=477.52 Aligned_cols=231 Identities=29% Similarity=0.429 Sum_probs=207.6
Q ss_pred ccchhc--CChhHHHHHHHHHHHHHhcCchhhhhHHHHHhc-----ccCCC--CCCcccccCCCCCCccccCCCCCCCCC
Q 021592 13 YKYYDD--TCPSLTRIVRYGVWSAISNETRMAASLLRLHFH-----DCFVK--GCDGSVLLDDTSTTKGEKNAFPNRNSA 83 (310)
Q Consensus 13 ~~fY~~--sCp~~e~iV~~~v~~~~~~~~~~aa~llRL~FH-----Dcfv~--GcDgSill~~~~~~~~E~~~~~N~~~l 83 (310)
-+||.. -|+.+++.++..|++.+ .+++++|.||||+|| ||+++ ||||||.+ .+|+++++|. +|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~------~~E~~~~~N~-gl 74 (250)
T PLN02364 3 KNYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRF------DAEQAHGANS-GI 74 (250)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCccccc------cccccCCCcc-CH
Confidence 356653 48899999999999988 689999999999999 88876 99999954 3699999998 88
Q ss_pred -chHHHHHHHHHHHHhhCCCCCChhhHHHHhHHHHHHhcCCCceeecCCCCCCCCCCccccCCCCCCCCCHHHHHHHHHH
Q 021592 84 -RGFEVIDAIKANLEKACPATVSCTDILTLVAREAVFLGGGPFWAVPLGRRDGLTASESEANNLPSPFEPLQNITAKFTA 162 (310)
Q Consensus 84 -~g~~~i~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~ 162 (310)
+||++|+.||+++ ++|||||||+||||+||+++|||.|+|++||+|++++.+.. +||.|+.++++|++.|++
T Consensus 75 ~~~~~~i~~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~--~lP~p~~~~~~l~~~F~~ 147 (250)
T PLN02364 75 HIALRLLDPIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPPEG--RLPDATKGCDHLRDVFAK 147 (250)
T ss_pred HHHHHHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccccC--CCCCCCcCHHHHHHHHHH
Confidence 8999999999987 48999999999999999999999999999999999987543 799999999999999997
Q ss_pred -CCCCcccceeecccceeeccccccccccccCCCCCCCCCCCcCHHHHHHhhhcCCCCCCCCCccccccCCcccccchHH
Q 021592 163 -RGLDLKDVVVLSGGHTIGFAQCLSFKNRLFDFSGSGKPDPTLDASLLQSLQSTCPSQADSDTKLVALDSVTTNKFDNIY 241 (310)
Q Consensus 163 -~Gls~~elVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Y 241 (310)
+|||++|||||+||||||++|| .|+ +|.| .+ + .||.+|||+|
T Consensus 148 ~~Gl~~~d~VaLsGaHTiG~~hc----~r~-~~~g-------------------------~~------~-~tp~~fDn~Y 190 (250)
T PLN02364 148 QMGLSDKDIVALSGAHTLGRCHK----DRS-GFEG-------------------------AW------T-SNPLIFDNSY 190 (250)
T ss_pred hcCCCHHHheeeecceeeccccC----CCC-CCCC-------------------------CC------C-CCCCccchHH
Confidence 6999999999999999999999 454 3322 01 1 6999999999
Q ss_pred HHHhhhc--ccccc--chhhhcCChhHHHHHHHhhcChhhHHHHHHHHHHHhHhCCCC
Q 021592 242 FQNLVNK--SGLLQ--SDQALMGDNRTAAMVQYYSKYPYFFSKDFGASMVKMANIGVL 295 (310)
Q Consensus 242 y~~l~~~--~glL~--sD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 295 (310)
|++|+.+ +|+|. ||++|+.|++|+.+|+.||.|++.|+++|++||+||++||+-
T Consensus 191 y~~ll~~~~~gll~l~sD~~L~~d~~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 191 FKELLSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred HHHHhcCCcCCCccccchHHHccCchHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 9999999 89865 999999999999999999999999999999999999999974
No 7
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=7.2e-65 Score=466.67 Aligned_cols=219 Identities=28% Similarity=0.404 Sum_probs=197.7
Q ss_pred HHHHHHHHHHHhcCchhhhhHHHHHhcccCC-------CCCCcccccCCCCCCccccCCCCCCCCCc-hHHHHHHHHHHH
Q 021592 25 RIVRYGVWSAISNETRMAASLLRLHFHDCFV-------KGCDGSVLLDDTSTTKGEKNAFPNRNSAR-GFEVIDAIKANL 96 (310)
Q Consensus 25 ~iV~~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GcDgSill~~~~~~~~E~~~~~N~~~l~-g~~~i~~iK~~l 96 (310)
+-++..|.+.+. +...+|.+|||+||||.+ |||||||++. .|+++++|. ||+ ++++|++||+++
T Consensus 18 ~~~~~~~~~~~~-~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~------~E~~~~~N~-gL~~~~~~i~~iK~~~ 89 (251)
T PLN02879 18 QRCKRKLRGLIA-EKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHP------QELAHDANN-GLDIAVRLLDPIKELF 89 (251)
T ss_pred HHHHHHHHHHHh-CCCchhHhHHHHHhhhccccCCCCCCCCCeeecCh------hhccCCCcC-ChHHHHHHHHHHHHHc
Confidence 446777888774 579999999999999974 8999999863 599999998 997 999999999987
Q ss_pred HhhCCCCCChhhHHHHhHHHHHHhcCCCceeecCCCCCCCCCCccccCCCCCCCCCHHHHHHHHHHCCCCcccceeeccc
Q 021592 97 EKACPATVSCTDILTLVAREAVFLGGGPFWAVPLGRRDGLTASESEANNLPSPFEPLQNITAKFTARGLDLKDVVVLSGG 176 (310)
Q Consensus 97 e~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~elVaLsGa 176 (310)
++|||||||+||||+||+.+|||.|+|++||+|+..+.+.. +||.|+.++++|++.|++|||+++|||||+||
T Consensus 90 -----~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~~~--~lP~p~~~~~~l~~~F~~~Gl~~~dlVALsGa 162 (251)
T PLN02879 90 -----PILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPPEG--RLPQATKGVDHLRDVFGRMGLNDKDIVALSGG 162 (251)
T ss_pred -----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCccc--CCCCCCCCHHHHHHHHHHcCCCHHHHeeeecc
Confidence 48999999999999999999999999999999999886433 89999999999999999999999999999999
Q ss_pred ceeeccccccccccccCCCCCCCCCCCcCHHHHHHhhhcCCCCCCCCCccccccCCcccccchHHHHHhhhc--ccc--c
Q 021592 177 HTIGFAQCLSFKNRLFDFSGSGKPDPTLDASLLQSLQSTCPSQADSDTKLVALDSVTTNKFDNIYFQNLVNK--SGL--L 252 (310)
Q Consensus 177 HtiG~~hc~~f~~Rl~~~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~~--~gl--L 252 (310)
||||++||. | ++|.| .| | .||.+|||+||++|+.+ +|+ |
T Consensus 163 HTiG~ah~~----r-~g~~g-------------------------~~------d-~tp~~FDN~Yy~~ll~~~~~gll~L 205 (251)
T PLN02879 163 HTLGRCHKE----R-SGFEG-------------------------AW------T-PNPLIFDNSYFKEILSGEKEGLLQL 205 (251)
T ss_pred ccccccccc----c-ccCCC-------------------------CC------C-CCccceeHHHHHHHHcCCcCCCccc
Confidence 999999994 4 34422 12 2 59999999999999999 888 6
Q ss_pred cchhhhcCChhHHHHHHHhhcChhhHHHHHHHHHHHhHhCCCC
Q 021592 253 QSDQALMGDNRTAAMVQYYSKYPYFFSKDFGASMVKMANIGVL 295 (310)
Q Consensus 253 ~sD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 295 (310)
+||++|+.|++|+++|++||.||++||++|++||+||++||+.
T Consensus 206 ~SD~aL~~D~~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 206 PTDKALLDDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred hhhHHHhcCCcHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 8999999999999999999999999999999999999999985
No 8
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=7.3e-65 Score=481.63 Aligned_cols=236 Identities=27% Similarity=0.368 Sum_probs=211.1
Q ss_pred HHHHHHHHHHHHHhcC---chhhhhHHHHHhcccCC------------CCCCcccccCCCCCCccccCCCCCCCCCchHH
Q 021592 23 LTRIVRYGVWSAISNE---TRMAASLLRLHFHDCFV------------KGCDGSVLLDDTSTTKGEKNAFPNRNSARGFE 87 (310)
Q Consensus 23 ~e~iV~~~v~~~~~~~---~~~aa~llRL~FHDcfv------------~GcDgSill~~~~~~~~E~~~~~N~~~l~g~~ 87 (310)
+|..|++.|++.+..+ ...|+.+|||+||||++ +||||||||+.+ .|+++++|. +|+ +
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~----~E~~~~~N~-gL~--~ 88 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDD----IETAFHANI-GLD--E 88 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCc----ccccCCCCC-CHH--H
Confidence 4789999999999854 45778899999999996 899999999753 599999998 887 8
Q ss_pred HHHHHHHHHHhhCCCCCChhhHHHHhHHHHHHh-cCCCceeecCCCCCCCCCCccccCCCCCCCCCHHHHHHHHHHCCCC
Q 021592 88 VIDAIKANLEKACPATVSCTDILTLVAREAVFL-GGGPFWAVPLGRRDGLTASESEANNLPSPFEPLQNITAKFTARGLD 166 (310)
Q Consensus 88 ~i~~iK~~le~~cp~~VScADilalAar~av~~-~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~Gls 166 (310)
+|+.||..+|+.| ||||||||||||+||+. .|||.|+|++||+|++++.+.+ +||.|+.++++|++.|+++||+
T Consensus 89 vvd~lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~~g--~LP~p~~sv~~l~~~F~~~Gf~ 163 (328)
T cd00692 89 IVEALRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAPDG--LVPEPFDSVDKILARFADAGFS 163 (328)
T ss_pred HHHHHHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCccc--CCCCCCCCHHHHHHHHHHcCCC
Confidence 9999999999998 99999999999999995 5999999999999999987544 7999999999999999999999
Q ss_pred cccceeecccceeeccccccccccccCCCCCCCCCCCcCHHHHHHhhhcCCCCCCCCCccccccCCcccccchHHHHHhh
Q 021592 167 LKDVVVLSGGHTIGFAQCLSFKNRLFDFSGSGKPDPTLDASLLQSLQSTCPSQADSDTKLVALDSVTTNKFDNIYFQNLV 246 (310)
Q Consensus 167 ~~elVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l~ 246 (310)
.+|||+|+||||||++|. +||+++ ..++| .||.+|||+||+|++
T Consensus 164 ~~E~VaLsGAHTiG~a~~---------------~Dps~~--------------------g~p~D-~TP~~FDn~Yf~~ll 207 (328)
T cd00692 164 PDELVALLAAHSVAAQDF---------------VDPSIA--------------------GTPFD-STPGVFDTQFFIETL 207 (328)
T ss_pred HHHHhhhcccccccccCC---------------CCCCCC--------------------CCCCC-CCcchhcHHHHHHHH
Confidence 999999999999999982 256554 14577 699999999999987
Q ss_pred -hccc-------------------cccchhhhcCChhHHHHHHHhhcChhhHHHHHHHHHHHhHhCCCCCCCCCcccccc
Q 021592 247 -NKSG-------------------LLQSDQALMGDNRTAAMVQYYSKYPYFFSKDFGASMVKMANIGVLTGQDGEIRKNC 306 (310)
Q Consensus 247 -~~~g-------------------lL~sD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C 306 (310)
.+++ +|+||++|+.|++|+.+|++||.||++|+++|++||+||++|||. ...+.+|
T Consensus 208 ~~~~~~~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~----~~~l~dc 283 (328)
T cd00692 208 LKGTAFPGSGGNQGEVESPLPGEFRLQSDFLLARDPRTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQD----NISLTDC 283 (328)
T ss_pred HcCCCCCCccccccccccCccccccccchHHHhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCC----cchhccC
Confidence 4555 499999999999999999999999999999999999999999987 3378899
Q ss_pred ccCC
Q 021592 307 RVVN 310 (310)
Q Consensus 307 ~~~n 310 (310)
+.|+
T Consensus 284 s~v~ 287 (328)
T cd00692 284 SDVI 287 (328)
T ss_pred cccC
Confidence 9875
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=8.6e-60 Score=435.93 Aligned_cols=222 Identities=32% Similarity=0.457 Sum_probs=203.9
Q ss_pred HHHHHHHHHHhcCchhhhhHHHHHhcccCCC--------CCCcccccCCCCCCccccCCCCCCCCC-chHHHHHHHHHHH
Q 021592 26 IVRYGVWSAISNETRMAASLLRLHFHDCFVK--------GCDGSVLLDDTSTTKGEKNAFPNRNSA-RGFEVIDAIKANL 96 (310)
Q Consensus 26 iV~~~v~~~~~~~~~~aa~llRL~FHDcfv~--------GcDgSill~~~~~~~~E~~~~~N~~~l-~g~~~i~~iK~~l 96 (310)
.|++.|++.+.+++.+++++|||+||||++. ||||||+++. |+++++|. +| +++++|++||.++
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~~------e~~~~~N~-~l~~~~~~l~~ik~~~ 74 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFEP------ELDRPENG-GLDKALRALEPIKSAY 74 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEeccc------cccCcccc-cHHHHHHHHHHHHHHc
Confidence 5889999999999999999999999999996 9999999973 99999998 75 8999999999999
Q ss_pred HhhCCCCCChhhHHHHhHHHHHHhc--CCCceeecCCCCCCCCCC--ccccC-CCCCCCCCHHHHHHHHHHCCCCcccce
Q 021592 97 EKACPATVSCTDILTLVAREAVFLG--GGPFWAVPLGRRDGLTAS--ESEAN-NLPSPFEPLQNITAKFTARGLDLKDVV 171 (310)
Q Consensus 97 e~~cp~~VScADilalAar~av~~~--GGP~~~v~~GR~D~~~s~--~~~~~-~lP~p~~~~~~l~~~F~~~Gls~~elV 171 (310)
|. |++|||||||+||+++||+.+ |||.|+|++||+|++.+. ...+. ++|.|+.+++++++.|+++||+++|||
T Consensus 75 ~~--~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~e~V 152 (255)
T cd00314 75 DG--GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPSELV 152 (255)
T ss_pred CC--CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHHHHH
Confidence 98 899999999999999999999 999999999999999764 33334 788888999999999999999999999
Q ss_pred eec-cccee-eccccccccccccCCCCCCCCCCCcCHHHHHHhhhcCCCCCCCCCccccccCCcccccchHHHHHhhhcc
Q 021592 172 VLS-GGHTI-GFAQCLSFKNRLFDFSGSGKPDPTLDASLLQSLQSTCPSQADSDTKLVALDSVTTNKFDNIYFQNLVNKS 249 (310)
Q Consensus 172 aLs-GaHti-G~~hc~~f~~Rl~~~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~~~ 249 (310)
||+ ||||| |++||..+..|+ |+ ++..||.+|||+||++|+.++
T Consensus 153 AL~~GaHti~G~~~~~~~~~~~------------------------~~-----------~~~~tp~~fDN~yy~~l~~~~ 197 (255)
T cd00314 153 ALSAGAHTLGGKNHGDLLNYEG------------------------SG-----------LWTSTPFTFDNAYFKNLLDMN 197 (255)
T ss_pred hhccCCeeccCcccCCCCCccc------------------------CC-----------CCCCCCCccchHHHHHHhcCC
Confidence 999 99999 999998876664 22 223799999999999999988
Q ss_pred ----------------ccccchhhhcCChhHHHHHHHhhcChhhHHHHHHHHHHHhHh
Q 021592 250 ----------------GLLQSDQALMGDNRTAAMVQYYSKYPYFFSKDFGASMVKMAN 291 (310)
Q Consensus 250 ----------------glL~sD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 291 (310)
++|+||++|+.|++|+.+|++||.|++.|+++|++||+||++
T Consensus 198 ~~~~~~~~~~~~~~~~~~l~sD~~L~~d~~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 198 WEWRVGSPDPDGVKGPGLLPSDYALLSDSETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred cccccCCccCCCcccCCCchhhHHHhcCHhHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 899999999999999999999999999999999999999984
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=4.6e-59 Score=448.75 Aligned_cols=267 Identities=20% Similarity=0.298 Sum_probs=232.6
Q ss_pred hhcCChhHH-HHHHHHHHHHHhcC--------chhhhhHHHHHhcccCC-------CCCC-cccccCCCCCCccccCCCC
Q 021592 16 YDDTCPSLT-RIVRYGVWSAISNE--------TRMAASLLRLHFHDCFV-------KGCD-GSVLLDDTSTTKGEKNAFP 78 (310)
Q Consensus 16 Y~~sCp~~e-~iV~~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~GcD-gSill~~~~~~~~E~~~~~ 78 (310)
|.+.+-.+. +.|++.|++.+... ...+|.+|||+||++.+ ||++ |+|.+. +|++++.
T Consensus 35 ~~~~~~~~d~~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~------pe~~~~~ 108 (409)
T cd00649 35 YAEEFKKLDLEALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFA------PLNSWPD 108 (409)
T ss_pred HHHHhhhccHHHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccc------cccCcHh
Confidence 444443332 68999999999864 37999999999999986 7997 788765 6999999
Q ss_pred CCCCC-chHHHHHHHHHHHHhhCCCCCChhhHHHHhHHHHHHhcCCCceeecCCCCCCCCCCc-----------------
Q 021592 79 NRNSA-RGFEVIDAIKANLEKACPATVSCTDILTLVAREAVFLGGGPFWAVPLGRRDGLTASE----------------- 140 (310)
Q Consensus 79 N~~~l-~g~~~i~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~----------------- 140 (310)
|. +| +++.++++||+++ |..||+||+|+||+.+|||.+|||.|+|.+||.|...+..
T Consensus 109 N~-gL~~a~~~L~pik~k~----~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~ 183 (409)
T cd00649 109 NV-NLDKARRLLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYS 183 (409)
T ss_pred hh-hHHHHHHHHHHHHHHc----CCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccccc
Confidence 98 88 5899999999987 3479999999999999999999999999999999975432
Q ss_pred ---------------------cccCCCCCCCCCHHHHHHHHHHCCCCcccceee-cccceeeccccccccccccCCCCCC
Q 021592 141 ---------------------SEANNLPSPFEPLQNITAKFTARGLDLKDVVVL-SGGHTIGFAQCLSFKNRLFDFSGSG 198 (310)
Q Consensus 141 ---------------------~~~~~lP~p~~~~~~l~~~F~~~Gls~~elVaL-sGaHtiG~~hc~~f~~Rl~~~~g~~ 198 (310)
+++..||+|..++.+|++.|.+||||++||||| +||||||++||..|.+||.
T Consensus 184 ~~~~l~~pl~a~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg------ 257 (409)
T cd00649 184 GDRDLENPLAAVQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASHVG------ 257 (409)
T ss_pred cchhhccchhhhhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHHHHeeeccCCcceeecCcccccccCC------
Confidence 232379999999999999999999999999999 5999999999999999982
Q ss_pred CCCCCcCHHHHHHhh--hcCCCCCCCCCcccccc---CCcccccchHHHHHhhh--------------------------
Q 021592 199 KPDPTLDASLLQSLQ--STCPSQADSDTKLVALD---SVTTNKFDNIYFQNLVN-------------------------- 247 (310)
Q Consensus 199 ~~dp~~d~~~~~~L~--~~Cp~~~~~~~~~~~lD---~~tp~~FDN~Yy~~l~~-------------------------- 247 (310)
+||.+++.|+..|+ ..||...+..+....+| ..||++|||+||++|+.
T Consensus 258 -~dP~~~~~~~~gLgw~~~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~ 336 (409)
T cd00649 258 -PEPEAAPIEQQGLGWKNSYGTGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTV 336 (409)
T ss_pred -CCCCcCHHHHHhhcccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccC
Confidence 59999999999995 89994334444456788 47999999999999998
Q ss_pred ----------ccccccchhhhcCChhHHHHHHHhhcChhhHHHHHHHHHHHh--HhCCCCCCCCC
Q 021592 248 ----------KSGLLQSDQALMGDNRTAAMVQYYSKYPYFFSKDFGASMVKM--ANIGVLTGQDG 300 (310)
Q Consensus 248 ----------~~glL~sD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km--~~lgv~tg~~G 300 (310)
+.|||+||++|+.|++|+++|++||.|+++||++|++||+|| +.+|+++.--|
T Consensus 337 ~d~~~~~~~~~~gmL~SD~aL~~Dp~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~~~~g 401 (409)
T cd00649 337 PDAHDPSKKHAPMMLTTDLALRFDPEYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKSRYLG 401 (409)
T ss_pred CCccccccccCcccchhhHhhhcCccHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchhhhcC
Confidence 568999999999999999999999999999999999999999 69999987655
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=1.3e-55 Score=448.88 Aligned_cols=265 Identities=21% Similarity=0.288 Sum_probs=227.8
Q ss_pred hhcCChhH-HHHHHHHHHHHHhcC--------chhhhhHHHHHhcccCC-------CCCC-cccccCCCCCCccccCCCC
Q 021592 16 YDDTCPSL-TRIVRYGVWSAISNE--------TRMAASLLRLHFHDCFV-------KGCD-GSVLLDDTSTTKGEKNAFP 78 (310)
Q Consensus 16 Y~~sCp~~-e~iV~~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~GcD-gSill~~~~~~~~E~~~~~ 78 (310)
|.+-+-.+ .+.|++.|++.+... ...+|.+|||+||++.+ |||+ |+|.+. +|++++.
T Consensus 45 y~~~~~~ld~~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~------P~~sw~~ 118 (716)
T TIGR00198 45 YAEEFQQLDLAAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFA------PLNSWPD 118 (716)
T ss_pred HHHHhhhccHHHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecc------cccCchh
Confidence 55544433 257999999999864 37999999999999986 7884 788765 6999999
Q ss_pred CCCCC-chHHHHHHHHHHHHhhCCCCCChhhHHHHhHHHHHHhcCCCceeecCCCCCCCCCC------------------
Q 021592 79 NRNSA-RGFEVIDAIKANLEKACPATVSCTDILTLVAREAVFLGGGPFWAVPLGRRDGLTAS------------------ 139 (310)
Q Consensus 79 N~~~l-~g~~~i~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~------------------ 139 (310)
|. +| +++.++++||++ ||++|||||||+||+++||+.+|||.|+|.+||+|+..+.
T Consensus 119 N~-~Ldka~~lL~pIk~k----yp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~~~ 193 (716)
T TIGR00198 119 NV-NLDKARRLLWPIKKK----YGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSRED 193 (716)
T ss_pred hh-hHHHHHHHHHHHHHH----CCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhhccccc
Confidence 98 88 688999999985 7899999999999999999999999999999999994321
Q ss_pred -------------------ccccCCCCCCCCCHHHHHHHHHHCCCCcccceeec-ccceeeccccccccccccCCCCCCC
Q 021592 140 -------------------ESEANNLPSPFEPLQNITAKFTARGLDLKDVVVLS-GGHTIGFAQCLSFKNRLFDFSGSGK 199 (310)
Q Consensus 140 -------------------~~~~~~lP~p~~~~~~l~~~F~~~Gls~~elVaLs-GaHtiG~~hc~~f~~Rl~~~~g~~~ 199 (310)
+++++.+|.|..++.+|++.|.+||||++|||||+ ||||||++||.+|.+|| +
T Consensus 194 ~~~l~~p~a~~~~Gliyvnpeg~~~lPdP~~sa~~Lrd~F~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rl-------g 266 (716)
T TIGR00198 194 RESLENPLAATEMGLIYVNPEGPDGHPDPLCTAQDIRTTFARMGMNDEETVALIAGGHTVGKCHGAGPAELI-------G 266 (716)
T ss_pred cccccccchhhhccccccCcccccCCCCCCCCHHHHHHHHHHcCCChHHHeeeecCceeccccCCCcccccC-------C
Confidence 12222699999999999999999999999999995 99999999999999998 2
Q ss_pred CCCCcCHHHHHHhhhcCCCCC--CCCCcccccc---CCcccccchHHHHHhhhc--------------------------
Q 021592 200 PDPTLDASLLQSLQSTCPSQA--DSDTKLVALD---SVTTNKFDNIYFQNLVNK-------------------------- 248 (310)
Q Consensus 200 ~dp~~d~~~~~~L~~~Cp~~~--~~~~~~~~lD---~~tp~~FDN~Yy~~l~~~-------------------------- 248 (310)
+||++++.|++.|+..||... +..+....+| ..||.+|||+||+||+..
T Consensus 267 ~dP~~~~~~~~gLg~~c~~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~ 346 (716)
T TIGR00198 267 PDPEGAPIEEQGLGWHNQYGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDV 346 (716)
T ss_pred CCCCcCHHHHHHhcccCCCCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeecccccccccc
Confidence 799999999999999998432 2233356777 479999999999999974
Q ss_pred --------cccccchhhhcCChhHHHHHHHhhcChhhHHHHHHHHHHHhH--hCCCCCCC
Q 021592 249 --------SGLLQSDQALMGDNRTAAMVQYYSKYPYFFSKDFGASMVKMA--NIGVLTGQ 298 (310)
Q Consensus 249 --------~glL~sD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~--~lgv~tg~ 298 (310)
.+||+||++|..|++++++|++||.|++.|+++|++||.||+ .+|++..-
T Consensus 347 ~~~~~~~~~~mL~SDlaL~~Dp~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~~~y 406 (716)
T TIGR00198 347 EDPNKKHNPIMLDADLALRFDPEFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPKSRY 406 (716)
T ss_pred cccccccccCccchhHHhccCccHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCchhhh
Confidence 689999999999999999999999999999999999999999 67776543
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=1.4e-52 Score=424.61 Aligned_cols=272 Identities=21% Similarity=0.306 Sum_probs=231.0
Q ss_pred CCccc-hhcCChhH-HHHHHHHHHHHHhcC--------chhhhhHHHHHhcccCC-------CCCC-cccccCCCCCCcc
Q 021592 11 LDYKY-YDDTCPSL-TRIVRYGVWSAISNE--------TRMAASLLRLHFHDCFV-------KGCD-GSVLLDDTSTTKG 72 (310)
Q Consensus 11 l~~~f-Y~~sCp~~-e~iV~~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~GcD-gSill~~~~~~~~ 72 (310)
+-.+| |.+-+-.+ .+.|++.|++.+... ...+|.+|||+||++.+ |||+ |+|.+. +
T Consensus 41 ~~~~f~y~~~~~~ld~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf~------p 114 (726)
T PRK15061 41 MGEDFDYAEEFKKLDLEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFA------P 114 (726)
T ss_pred CCCCCCHHHHhchhhHHHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccCc------c
Confidence 33344 55544443 257999999999864 37999999999999986 7886 788764 6
Q ss_pred ccCCCCCCCCC-chHHHHHHHHHHHHhhCCCCCChhhHHHHhHHHHHHhcCCCceeecCCCCCCCCCCc-----------
Q 021592 73 EKNAFPNRNSA-RGFEVIDAIKANLEKACPATVSCTDILTLVAREAVFLGGGPFWAVPLGRRDGLTASE----------- 140 (310)
Q Consensus 73 E~~~~~N~~~l-~g~~~i~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~----------- 140 (310)
|.+++.|. +| +++.++++||+++ |..||+||+|+||+..|||.+|||.|+|.+||.|...+..
T Consensus 115 e~~w~~N~-gL~ka~~~L~pik~ky----~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l 189 (726)
T PRK15061 115 LNSWPDNV-NLDKARRLLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWL 189 (726)
T ss_pred cccchhhh-hHHHHHHHHHHHHHHh----CCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCcccccc
Confidence 99999998 88 6899999999987 4579999999999999999999999999999999865432
Q ss_pred ----------------------------cccCCCCCCCCCHHHHHHHHHHCCCCcccceeec-ccceeeccccccccccc
Q 021592 141 ----------------------------SEANNLPSPFEPLQNITAKFTARGLDLKDVVVLS-GGHTIGFAQCLSFKNRL 191 (310)
Q Consensus 141 ----------------------------~~~~~lP~p~~~~~~l~~~F~~~Gls~~elVaLs-GaHtiG~~hc~~f~~Rl 191 (310)
++++.+|+|..++.+|++.|.+||||++|||||+ ||||||++||..|.+||
T Consensus 190 ~~~~r~~~~~~l~~pl~a~~mgliyvnpegp~glPdP~~sa~~lR~tF~RMGmnDeEtVALiaGgHT~GkaHca~~~~rl 269 (726)
T PRK15061 190 GGDERYSGERDLENPLAAVQMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDASHV 269 (726)
T ss_pred ccccccccccccccchhhhhccceecCCCCCCCCCCcccCHHHHHHHHHHcCCCHHHheeeccCCceeeeCCCcCccccc
Confidence 1222489999999999999999999999999995 99999999999999997
Q ss_pred cCCCCCCCCCCCcCHHHHHHhh--hcCCCCCCCCCcccccc---CCcccccchHHHHHhhhc------------------
Q 021592 192 FDFSGSGKPDPTLDASLLQSLQ--STCPSQADSDTKLVALD---SVTTNKFDNIYFQNLVNK------------------ 248 (310)
Q Consensus 192 ~~~~g~~~~dp~~d~~~~~~L~--~~Cp~~~~~~~~~~~lD---~~tp~~FDN~Yy~~l~~~------------------ 248 (310)
++||++++.+++.|. ..||...+.++....+| ..||++|||+||++|+.+
T Consensus 270 -------gpdP~~a~~~~qgLgw~~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~ 342 (726)
T PRK15061 270 -------GPEPEAAPIEEQGLGWKNSYGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKD 342 (726)
T ss_pred -------CCCCCcCHHHHHhccccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccC
Confidence 269999999999985 89994334444456788 579999999999999984
Q ss_pred ------------------cccccchhhhcCChhHHHHHHHhhcChhhHHHHHHHHHHHh--HhCCCCCCCCC
Q 021592 249 ------------------SGLLQSDQALMGDNRTAAMVQYYSKYPYFFSKDFGASMVKM--ANIGVLTGQDG 300 (310)
Q Consensus 249 ------------------~glL~sD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km--~~lgv~tg~~G 300 (310)
.+||+||++|..|++++++|++||.|+++|+++|++||.|| ..+|+++.--|
T Consensus 343 ~~~~~~~pd~~~~~~~~~~~MLtSD~AL~~DP~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~~ry~g 414 (726)
T PRK15061 343 GAAEDTVPDAHDPSKKHAPTMLTTDLALRFDPEYEKISRRFLENPEEFADAFARAWFKLTHRDMGPKSRYLG 414 (726)
T ss_pred ccccccCCcccccccccCcccccccHHhhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCchhhhcC
Confidence 58999999999999999999999999999999999999999 55787665433
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=1.7e-51 Score=377.98 Aligned_cols=217 Identities=22% Similarity=0.280 Sum_probs=178.1
Q ss_pred HHHHHHHhcCchhhhhHHHHHhcccC-------CCCCCcccccCCCCCCccccC-CCCCCCCCchHHHHHHHHHHHHhhC
Q 021592 29 YGVWSAISNETRMAASLLRLHFHDCF-------VKGCDGSVLLDDTSTTKGEKN-AFPNRNSARGFEVIDAIKANLEKAC 100 (310)
Q Consensus 29 ~~v~~~~~~~~~~aa~llRL~FHDcf-------v~GcDgSill~~~~~~~~E~~-~~~N~~~l~g~~~i~~iK~~le~~c 100 (310)
..-..+...++.+++.||||+||||| ++||||||+++.. .+|+. .+.|. +|++|+.|+.+
T Consensus 29 ~c~~~~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~~---~~En~G~~~n~-~l~~~~~i~~~-------- 96 (264)
T cd08201 29 PCTDCAPGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYELD---RPENIGSGFNT-TLNFFVNFYSP-------- 96 (264)
T ss_pred cccccCcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecCC---ChhhccCchhh-ccccceeeccC--------
Confidence 33334455789999999999999999 8999999999742 35776 45555 77888776432
Q ss_pred CCCCChhhHHHHhHHHHHHhcCCCceeecCCCCCCCCCCccccCCCCCCCCCHHHHHHHHHHCCCCcccceeecc-ccee
Q 021592 101 PATVSCTDILTLVAREAVFLGGGPFWAVPLGRRDGLTASESEANNLPSPFEPLQNITAKFTARGLDLKDVVVLSG-GHTI 179 (310)
Q Consensus 101 p~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~elVaLsG-aHti 179 (310)
+||||||||||||+||+.+|||.|+|++||+|++.+.+. .||.|+.++++|++.|++|||+++|||+|+| ||||
T Consensus 97 --~VScADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~---glP~P~~~v~~l~~~Fa~~Gfs~~DmVaLsggaHTi 171 (264)
T cd08201 97 --RSSMADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA---GVPEPQTDLGTTTESFRRQGFSTSEMIALVACGHTL 171 (264)
T ss_pred --ccCHHHHHHHHHHHHHHHcCCCeecccccCCCccccccc---cCCCCccCHHHHHHHHHHcCCChHHHheeecCCeee
Confidence 699999999999999999999999999999999988765 5999999999999999999999999999995 9999
Q ss_pred eccccccccccccCCCCCCCCCCCcCHHHHHHhhhcCCCCCCCCCccccccCCcccccchHHHHHhhhcc--c-------
Q 021592 180 GFAQCLSFKNRLFDFSGSGKPDPTLDASLLQSLQSTCPSQADSDTKLVALDSVTTNKFDNIYFQNLVNKS--G------- 250 (310)
Q Consensus 180 G~~hc~~f~~Rl~~~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~~~--g------- 250 (310)
|++||..|.++.- |. ...+...++| .||.+|||+||.+++.+. +
T Consensus 172 G~ahc~~f~~~~~---------~g-----------------~~~~~~~p~d-stp~~FDn~~f~E~l~g~~~~~L~~~~~ 224 (264)
T cd08201 172 GGVHSEDFPEIVP---------PG-----------------SVPDTVLQFF-DTTIQFDNKVVTEYLSGTTNNPLVVGPN 224 (264)
T ss_pred eecccccchhhcC---------Cc-----------------cccCCCCCCC-CCccccchHHHHHHhcCCCCCceeecCC
Confidence 9999998876631 10 0001234577 799999999999999874 2
Q ss_pred -cccchhhhcCChhHHHHHHHhhcChhhHHHHHHHHHHHhHh
Q 021592 251 -LLQSDQALMGDNRTAAMVQYYSKYPYFFSKDFGASMVKMAN 291 (310)
Q Consensus 251 -lL~sD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 291 (310)
.+.||..++..+.-. .++.+| +++.|.+.++..++||.+
T Consensus 225 ~~~~sd~r~f~~d~n~-t~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 225 NTTNSDLRIFSSDGNV-TMNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred CCccchhhheecCccH-HHHHhc-ChHHHHHHHHHHHHHHhC
Confidence 357999999765443 567777 789999999999999974
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=2.1e-41 Score=314.81 Aligned_cols=219 Identities=20% Similarity=0.220 Sum_probs=180.3
Q ss_pred HHHHHHHhcCchhhhhHHHHHhcccCC-------CCCCcc-cccCCCCCCccccCCCCCCCC--C-chHHHHHHHHHHHH
Q 021592 29 YGVWSAISNETRMAASLLRLHFHDCFV-------KGCDGS-VLLDDTSTTKGEKNAFPNRNS--A-RGFEVIDAIKANLE 97 (310)
Q Consensus 29 ~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GcDgS-ill~~~~~~~~E~~~~~N~~~--l-~g~~~i~~iK~~le 97 (310)
+.|++.+......++.||||+||++.+ ||++|+ |.|. +|++++.|. + | +.+.++++||+++.
T Consensus 17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl~------pe~~w~~N~-~~~L~~~~~~Le~ik~~~~ 89 (297)
T cd08200 17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRLA------PQKDWEVNE-PEELAKVLAVLEGIQKEFN 89 (297)
T ss_pred HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccCc------cccCcCccC-cHHHHHHHHHHHHHHHHhc
Confidence 667777777778899999999999986 899998 7664 699999998 7 7 58899999999984
Q ss_pred hh-CCC-CCChhhHHHHhHHHHHHhcCC-----CceeecCCCCCCCCCCcccc--C-CCCCCC------------CCHHH
Q 021592 98 KA-CPA-TVSCTDILTLVAREAVFLGGG-----PFWAVPLGRRDGLTASESEA--N-NLPSPF------------EPLQN 155 (310)
Q Consensus 98 ~~-cp~-~VScADilalAar~av~~~GG-----P~~~v~~GR~D~~~s~~~~~--~-~lP~p~------------~~~~~ 155 (310)
.. -++ .||+||+|+||+..|||.+|| |.|+|.+||.|...+..... . .+|.+. ...++
T Consensus 90 ~~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~ 169 (297)
T cd08200 90 ESQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEM 169 (297)
T ss_pred ccccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHH
Confidence 21 122 799999999999999999999 99999999999987643211 1 345332 23578
Q ss_pred HHHHHHHCCCCcccceeecccc-eeeccccccccccccCCCCCCCCCCCcCHHHHHHhhhcCCCCCCCCCccccccCCcc
Q 021592 156 ITAKFTARGLDLKDVVVLSGGH-TIGFAQCLSFKNRLFDFSGSGKPDPTLDASLLQSLQSTCPSQADSDTKLVALDSVTT 234 (310)
Q Consensus 156 l~~~F~~~Gls~~elVaLsGaH-tiG~~hc~~f~~Rl~~~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp 234 (310)
|++.|.++|||++|||||+||| ++|+.|..+ +. |.|+ .+|
T Consensus 170 Lrd~f~rlglsd~EmvaL~Gg~r~lG~~~~~s-------~~-------------------------G~wT-------~~p 210 (297)
T cd08200 170 LVDKAQLLTLTAPEMTVLVGGLRVLGANYGGS-------KH-------------------------GVFT-------DRP 210 (297)
T ss_pred HHHHHHhCCCChHHHhheecchhhcccCCCCC-------CC-------------------------CCCc-------CCC
Confidence 9999999999999999999997 799887422 11 2255 689
Q ss_pred cccchHHHHHhhhc--------------------cc-----cccchhhhcCChhHHHHHHHhhcC--hhhHHHHHHHHHH
Q 021592 235 NKFDNIYFQNLVNK--------------------SG-----LLQSDQALMGDNRTAAMVQYYSKY--PYFFSKDFGASMV 287 (310)
Q Consensus 235 ~~FDN~Yy~~l~~~--------------------~g-----lL~sD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~ 287 (310)
.+|||.||+||+.- .| ++.+|.+|.+|++.|++|+.||.| ++.||+||++||.
T Consensus 211 ~~f~N~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~~~R~~ve~YA~dd~~~~F~~DF~~A~~ 290 (297)
T cd08200 211 GVLTNDFFVNLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNSELRAVAEVYASDDAQEKFVKDFVAAWT 290 (297)
T ss_pred CccccHHHHHHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCHHHHHHHHHHhcccchhHHHHHHHHHHH
Confidence 99999999999951 01 268899999999999999999999 9999999999999
Q ss_pred HhHhCC
Q 021592 288 KMANIG 293 (310)
Q Consensus 288 Km~~lg 293 (310)
||+++.
T Consensus 291 Klmeld 296 (297)
T cd08200 291 KVMNLD 296 (297)
T ss_pred HHHhcC
Confidence 999874
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=1.3e-35 Score=302.72 Aligned_cols=220 Identities=22% Similarity=0.243 Sum_probs=176.1
Q ss_pred HHHHHHHH---HHhcCchhhhhHHHHHhcccCC-------CCCCcc-cccCCCCCCccccCCCCC--CCCC-chHHHHHH
Q 021592 26 IVRYGVWS---AISNETRMAASLLRLHFHDCFV-------KGCDGS-VLLDDTSTTKGEKNAFPN--RNSA-RGFEVIDA 91 (310)
Q Consensus 26 iV~~~v~~---~~~~~~~~aa~llRL~FHDcfv-------~GcDgS-ill~~~~~~~~E~~~~~N--~~~l-~g~~~i~~ 91 (310)
+|+++|.+ .+.......+.||||+||++.+ ||++|+ |.|. +|++++.| . +| +.+.++++
T Consensus 429 ~v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~------pe~~w~~N~p~-gL~~vl~~Le~ 501 (716)
T TIGR00198 429 LSEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLE------PQKNWPVNEPT-RLAKVLAVLEK 501 (716)
T ss_pred hHHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecc------hhcCcccCCHH-HHHHHHHHHHH
Confidence 34555554 3555667889999999999986 899998 7665 69999999 6 77 58899999
Q ss_pred HHHHHHhhCCCCCChhhHHHHhHHHHHHhc---CCC--ceeecCCCCCCCCCCccccCCC---CCC------------CC
Q 021592 92 IKANLEKACPATVSCTDILTLVAREAVFLG---GGP--FWAVPLGRRDGLTASESEANNL---PSP------------FE 151 (310)
Q Consensus 92 iK~~le~~cp~~VScADilalAar~av~~~---GGP--~~~v~~GR~D~~~s~~~~~~~l---P~p------------~~ 151 (310)
||+++.. ..||+||+|+||+..|||.+ ||| .++|.+||.|++.......... |.+ ..
T Consensus 502 Ik~~f~~---~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~td~~~~~~l~p~adgfRn~~~~~~~~~ 578 (716)
T TIGR00198 502 IQAEFAK---GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMTDAESFTPLEPIADGFRNYLKRDYAVT 578 (716)
T ss_pred HHHHcCC---CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCCCccccccCCCCCcccchhccccccCC
Confidence 9998842 27999999999999999999 898 5899999999987642211111 211 23
Q ss_pred CHHHHHHHHHHCCCCcccceeeccc-ceeeccccccccccccCCCCCCCCCCCcCHHHHHHhhhcCCCCCCCCCcccccc
Q 021592 152 PLQNITAKFTARGLDLKDVVVLSGG-HTIGFAQCLSFKNRLFDFSGSGKPDPTLDASLLQSLQSTCPSQADSDTKLVALD 230 (310)
Q Consensus 152 ~~~~l~~~F~~~Gls~~elVaLsGa-HtiG~~hc~~f~~Rl~~~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD 230 (310)
....|++.|.++|||++|||||+|| |++|++|..+ +. |.|+
T Consensus 579 ~~~~l~d~a~~lglt~~EmvaL~Gg~r~lG~~~~~s-------~~-------------------------G~~T------ 620 (716)
T TIGR00198 579 PEELLLDKAQLLTLTAPEMTVLIGGMRVLGANHGGS-------KH-------------------------GVFT------ 620 (716)
T ss_pred HHHHHHHHHHhCCCChHHHHheecchhhccccCCCC-------CC-------------------------CCCc------
Confidence 3567889999999999999999999 5999998522 11 2244
Q ss_pred CCcccccchHHHHHhhhcc--------------------c---c--ccchhhhcCChhHHHHHHHhhcCh--hhHHHHHH
Q 021592 231 SVTTNKFDNIYFQNLVNKS--------------------G---L--LQSDQALMGDNRTAAMVQYYSKYP--YFFSKDFG 283 (310)
Q Consensus 231 ~~tp~~FDN~Yy~~l~~~~--------------------g---l--L~sD~~L~~d~~t~~~V~~yA~d~--~~F~~~Fa 283 (310)
.+|.+|||.||+||+.-. | + ..+|.+|..|++.|++|+.||+|+ +.||+||+
T Consensus 621 -~~p~~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~~lra~aE~YA~dd~~~~F~~DF~ 699 (716)
T TIGR00198 621 -DRVGVLSNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNSILRAVAEVYAQDDAREKFVKDFV 699 (716)
T ss_pred -CCCCccccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCHHHHHHHHHHhcccccchHHHHHH
Confidence 589999999999998620 1 2 278999999999999999999997 89999999
Q ss_pred HHHHHhHhCCC
Q 021592 284 ASMVKMANIGV 294 (310)
Q Consensus 284 ~Am~Km~~lgv 294 (310)
+||.|+++++-
T Consensus 700 ~Aw~Klm~ldr 710 (716)
T TIGR00198 700 AAWTKVMNLDR 710 (716)
T ss_pred HHHHHHHhCCC
Confidence 99999999873
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=3.9e-35 Score=297.80 Aligned_cols=220 Identities=21% Similarity=0.233 Sum_probs=179.9
Q ss_pred HHHHHHHhcCchhhhhHHHHHhcccCC-------CCCCcc-cccCCCCCCccccCCCCCCC-CC-chHHHHHHHHHHHHh
Q 021592 29 YGVWSAISNETRMAASLLRLHFHDCFV-------KGCDGS-VLLDDTSTTKGEKNAFPNRN-SA-RGFEVIDAIKANLEK 98 (310)
Q Consensus 29 ~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GcDgS-ill~~~~~~~~E~~~~~N~~-~l-~g~~~i~~iK~~le~ 98 (310)
..+++.+....-..+.|||++||++.+ ||++|+ |.|. +|++++.|.. +| +.+.+++.||++++.
T Consensus 442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~------Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~ 515 (726)
T PRK15061 442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNEPAQLAKVLAVLEGIQAEFNA 515 (726)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc------cccCccccCHHHHHHHHHHHHHHHHHHhh
Confidence 567777777778899999999999986 899998 8775 6999999973 46 578999999999864
Q ss_pred hC--CCCCChhhHHHHhHHHHHHhc---CC--CceeecCCCCCCCCCCcccc--C-CCCCCC------------CCHHHH
Q 021592 99 AC--PATVSCTDILTLVAREAVFLG---GG--PFWAVPLGRRDGLTASESEA--N-NLPSPF------------EPLQNI 156 (310)
Q Consensus 99 ~c--p~~VScADilalAar~av~~~---GG--P~~~v~~GR~D~~~s~~~~~--~-~lP~p~------------~~~~~l 156 (310)
.- ...||+||+|+||+..|||.+ || |.+++.+||.|++....... . .+|.+. .....|
T Consensus 516 ~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~td~esf~~l~P~Adgfrny~~~~~~~~~e~~L 595 (726)
T PRK15061 516 AQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQTDVESFAVLEPKADGFRNYLKKGYSVSPEELL 595 (726)
T ss_pred ccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCCCcccccccCCCCccccccccccCCCCHHHHH
Confidence 32 136999999999999999999 68 99999999999987543221 1 456543 234789
Q ss_pred HHHHHHCCCCcccceeecccc-eeeccccccccccccCCCCCCCCCCCcCHHHHHHhhhcCCCCCCCCCccccccCCccc
Q 021592 157 TAKFTARGLDLKDVVVLSGGH-TIGFAQCLSFKNRLFDFSGSGKPDPTLDASLLQSLQSTCPSQADSDTKLVALDSVTTN 235 (310)
Q Consensus 157 ~~~F~~~Gls~~elVaLsGaH-tiG~~hc~~f~~Rl~~~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~ 235 (310)
++.|.++|||++|||||+||| ++|+.|-.+ +. |.|+ .+|.
T Consensus 596 ~d~a~~lglt~~EmvaL~Gg~r~Lg~~~~~S-------~~-------------------------G~~T-------~~p~ 636 (726)
T PRK15061 596 VDKAQLLTLTAPEMTVLVGGLRVLGANYGGS-------KH-------------------------GVFT-------DRPG 636 (726)
T ss_pred HHHHHhCCCChHHHhheecchhhcccCCCCC-------CC-------------------------CCCc-------CCCC
Confidence 999999999999999999997 788887321 11 2244 5899
Q ss_pred ccchHHHHHhhhc----------c----------c---c--ccchhhhcCChhHHHHHHHhhcC--hhhHHHHHHHHHHH
Q 021592 236 KFDNIYFQNLVNK----------S----------G---L--LQSDQALMGDNRTAAMVQYYSKY--PYFFSKDFGASMVK 288 (310)
Q Consensus 236 ~FDN~Yy~~l~~~----------~----------g---l--L~sD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~K 288 (310)
+|||.||+||+.- . | + +.+|.+|.+|++.|++|+.||.| ++.||+||++||.|
T Consensus 637 ~fsNdfFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds~lRa~aEvYA~dd~~~kF~~DF~~Aw~K 716 (726)
T PRK15061 637 VLTNDFFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNSQLRALAEVYASDDAKEKFVRDFVAAWTK 716 (726)
T ss_pred ccccHHHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCHHHHHHHHHHhcccchhHHHHHHHHHHHH
Confidence 9999999999951 1 1 1 47899999999999999999999 99999999999999
Q ss_pred hHhCC
Q 021592 289 MANIG 293 (310)
Q Consensus 289 m~~lg 293 (310)
+++++
T Consensus 717 vmeld 721 (726)
T PRK15061 717 VMNLD 721 (726)
T ss_pred HHhCC
Confidence 99987
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.98 E-value=3.8e-32 Score=265.12 Aligned_cols=251 Identities=21% Similarity=0.288 Sum_probs=197.6
Q ss_pred HHHHHHHHHHhcC--------chhhhhHHHHHhcccCC-------CCCCcccccCCCCCCccccCCCCCCCCC-chHHHH
Q 021592 26 IVRYGVWSAISNE--------TRMAASLLRLHFHDCFV-------KGCDGSVLLDDTSTTKGEKNAFPNRNSA-RGFEVI 89 (310)
Q Consensus 26 iV~~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~GcDgSill~~~~~~~~E~~~~~N~~~l-~g~~~i 89 (310)
.|+..+.+.+... ...+|.+|||+||-+.+ ||..+ +..+|.++.++|.|. +| +++.++
T Consensus 71 Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~-----G~qRFaPlnSWPDN~-nLDKarRLL 144 (730)
T COG0376 71 AVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGG-----GQQRFAPLNSWPDNA-NLDKARRLL 144 (730)
T ss_pred HHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCC-----CceecccccCCCccc-chHHHHHHh
Confidence 4566666666644 25899999999999986 34433 234567789999998 88 699999
Q ss_pred HHHHHHHHhhCCCCCChhhHHHHhHHHHHHhcCCCceeecCCCCCCCCCCc-----------------------------
Q 021592 90 DAIKANLEKACPATVSCTDILTLVAREAVFLGGGPFWAVPLGRRDGLTASE----------------------------- 140 (310)
Q Consensus 90 ~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~----------------------------- 140 (310)
.+||+++ +.+||+||+|+||+.+|++.+|++.+.+..||.|-..+..
T Consensus 145 WPIKkKY----G~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~Plaav 220 (730)
T COG0376 145 WPIKKKY----GRKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAV 220 (730)
T ss_pred hhHhHhh----cccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhh
Confidence 9999988 4699999999999999999999999999999999887765
Q ss_pred ---------cccCCCCCCCCCHHHHHHHHHHCCCCcccceeec-ccceeeccccccccccccCCCCCCCCCCCcCHHHHH
Q 021592 141 ---------SEANNLPSPFEPLQNITAKFTARGLDLKDVVVLS-GGHTIGFAQCLSFKNRLFDFSGSGKPDPTLDASLLQ 210 (310)
Q Consensus 141 ---------~~~~~lP~p~~~~~~l~~~F~~~Gls~~elVaLs-GaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~d~~~~~ 210 (310)
++++..|+|..+..+++..|++|+|+++|.|||+ ||||+|++|...-.+- -+++|.-.+--.+
T Consensus 221 qMGLIYVNPEGpng~PDpl~aA~dIRetFaRMaMNDeETVALiaGGHtfGKtHGag~a~~-------vg~ePe~a~ie~q 293 (730)
T COG0376 221 QMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASN-------VGPEPEAAPIEQQ 293 (730)
T ss_pred eeeeEEeCCCCCCCCCChhhhHHHHHHHHHHhcCCcHhhhhhhhcccccccccCCCchhh-------cCCCccccchhhh
Confidence 4444789999999999999999999999999998 7999999997542211 1356654444344
Q ss_pred Hhh--hcCCCCCCCCCcccccc---CCcccccchHHHHHhhhcc-----------------------------------c
Q 021592 211 SLQ--STCPSQADSDTKLVALD---SVTTNKFDNIYFQNLVNKS-----------------------------------G 250 (310)
Q Consensus 211 ~L~--~~Cp~~~~~~~~~~~lD---~~tp~~FDN~Yy~~l~~~~-----------------------------------g 250 (310)
.|- ..|-...+.++....+. ..||++|||+||.+|+... .
T Consensus 294 GlGW~~~~g~G~G~dtitsGlE~~Wt~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~ 373 (730)
T COG0376 294 GLGWANTYGSGKGPDTITSGLEGAWTTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPM 373 (730)
T ss_pred ccccccccCCCcCcccccccccccCCCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCce
Confidence 332 23331222222222232 2689999999999998631 4
Q ss_pred cccchhhhcCChhHHHHHHHhhcChhhHHHHHHHHHHHhHhCC
Q 021592 251 LLQSDQALMGDNRTAAMVQYYSKYPYFFSKDFGASMVKMANIG 293 (310)
Q Consensus 251 lL~sD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lg 293 (310)
||.+|.+|.-||..++|.++|..|++.|.+.|++||-||..-.
T Consensus 374 MlttDlaLr~DP~Y~kIs~rf~e~pd~F~~~FArAWfKLtHRD 416 (730)
T COG0376 374 MLTTDLALRFDPEYEKISRRFLEDPDEFADAFARAWFKLTHRD 416 (730)
T ss_pred eeccchhhhcChHHHHHHHHHHhCHHHHHHHHHHHHHHHhhcc
Confidence 8999999999999999999999999999999999999998643
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.49 E-value=3.3e-13 Score=133.12 Aligned_cols=216 Identities=22% Similarity=0.292 Sum_probs=156.1
Q ss_pred HHHHHHHhcCchhhhhHHHHHhcccCC-------CCCCc-ccccCCCCCCccccCCCCCCC-CC-chHHHHHHHHHHHHh
Q 021592 29 YGVWSAISNETRMAASLLRLHFHDCFV-------KGCDG-SVLLDDTSTTKGEKNAFPNRN-SA-RGFEVIDAIKANLEK 98 (310)
Q Consensus 29 ~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GcDg-Sill~~~~~~~~E~~~~~N~~-~l-~g~~~i~~iK~~le~ 98 (310)
..+++.+....-....|+-.+|-.+-+ +|.+| -|.|. +.++++.|.. -| +-+.+++.|.+..+
T Consensus 452 ~~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLa------PqkdWevN~P~~l~kvl~~le~iq~~fn- 524 (730)
T COG0376 452 AALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNQPAELAKVLAVLEKIQKEFN- 524 (730)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeec------ccccCCCCCHHHHHHHHHHHHHHHHHhc-
Confidence 456677777777888999999998865 68887 46664 5889999963 23 46788888888886
Q ss_pred hCCCCCChhhHHHHhHHHHHHhc---CCCc--eeecCCCCCCCCCCccccC-CC--CCC------------CCCHHHHHH
Q 021592 99 ACPATVSCTDILTLVAREAVFLG---GGPF--WAVPLGRRDGLTASESEAN-NL--PSP------------FEPLQNITA 158 (310)
Q Consensus 99 ~cp~~VScADilalAar~av~~~---GGP~--~~v~~GR~D~~~s~~~~~~-~l--P~p------------~~~~~~l~~ 158 (310)
..||.||+|+|++..|||.+ .|-. +++.+||.|+......... .+ |-. ...-.-|++
T Consensus 525 ---kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv~sf~~LeP~aDGfRNy~~~~~~~~pe~~LvD 601 (730)
T COG0376 525 ---KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDVESFAVLEPIADGFRNYVKKDYVLTPEELLVD 601 (730)
T ss_pred ---CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcchhhhhcccccchhhhhhccCCCcCCHHHHHHH
Confidence 47999999999999999986 6664 5778999999765432111 11 111 122344667
Q ss_pred HHHHCCCCcccceeecccce-eeccccccccccccCCCCCCCCCCCcCHHHHHHhhhcCCCCCCCCCccccccCCccccc
Q 021592 159 KFTARGLDLKDVVVLSGGHT-IGFAQCLSFKNRLFDFSGSGKPDPTLDASLLQSLQSTCPSQADSDTKLVALDSVTTNKF 237 (310)
Q Consensus 159 ~F~~~Gls~~elVaLsGaHt-iG~~hc~~f~~Rl~~~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~F 237 (310)
.-+-++||.-||++|+||-- +|. |+.|+ ...+..| .|..+
T Consensus 602 kAqlL~LtapemtVLiGGlRvLg~-----------n~g~s--------------------------~~GVfT~--~pg~L 642 (730)
T COG0376 602 KAQLLTLTAPEMTVLIGGLRVLGA-----------NYGGS--------------------------KHGVFTD--RPGVL 642 (730)
T ss_pred HHHHhccCCccceEEEcceEeecc-----------CCCCC--------------------------ccceecc--Ccccc
Confidence 88889999999999998742 332 22221 1112223 67888
Q ss_pred chHHHHHhhhc----------c----------cc-----ccchhhhcCChhHHHHHHHhhcC--hhhHHHHHHHHHHHhH
Q 021592 238 DNIYFQNLVNK----------S----------GL-----LQSDQALMGDNRTAAMVQYYSKY--PYFFSKDFGASMVKMA 290 (310)
Q Consensus 238 DN~Yy~~l~~~----------~----------gl-----L~sD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~ 290 (310)
.|.||.||+.= + |- -..|..+-+++..|.+.+-||.| ++.|.+||+.||.|..
T Consensus 643 tndFFvnLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns~LRA~aEVYa~dda~ekFv~DFvaaw~kVM 722 (730)
T COG0376 643 TNDFFVNLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNSELRALAEVYASDDAKEKFVKDFVAAWTKVM 722 (730)
T ss_pred cchhhhhhhhccceeeeccccccceeccccccCceEeeeeEEeEEecCcHHHHHHHHHHhccchHHHHHHHHHHHHHHHh
Confidence 88888888851 1 21 24677778899999999999976 7889999999999998
Q ss_pred hCC
Q 021592 291 NIG 293 (310)
Q Consensus 291 ~lg 293 (310)
++.
T Consensus 723 n~D 725 (730)
T COG0376 723 NLD 725 (730)
T ss_pred ccc
Confidence 864
No 19
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=55.29 E-value=9.8 Score=29.36 Aligned_cols=18 Identities=33% Similarity=0.464 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHhHhCCCC
Q 021592 278 FSKDFGASMVKMANIGVL 295 (310)
Q Consensus 278 F~~~Fa~Am~Km~~lgv~ 295 (310)
...+|..||.||+.||..
T Consensus 3 m~~~F~~am~KlavLG~d 20 (80)
T PF11895_consen 3 MQSAFKAAMAKLAVLGHD 20 (80)
T ss_dssp HHHHHHHHHHHHCTTTS-
T ss_pred HHHHHHHHHHHHHHhcCC
Confidence 567999999999999864
No 20
>PTZ00411 transaldolase-like protein; Provisional
Probab=44.45 E-value=19 Score=35.09 Aligned_cols=64 Identities=16% Similarity=0.155 Sum_probs=36.1
Q ss_pred CChhhHHHHhHHHHHH--hcCCCceeecCCCCCCCCCCccccCCC-CCCC---CCHHHHHHHHHHCCCCc
Q 021592 104 VSCTDILTLVAREAVF--LGGGPFWAVPLGRRDGLTASESEANNL-PSPF---EPLQNITAKFTARGLDL 167 (310)
Q Consensus 104 VScADilalAar~av~--~~GGP~~~v~~GR~D~~~s~~~~~~~l-P~p~---~~~~~l~~~F~~~Gls~ 167 (310)
|.|-=.+.+....|+. .+|-..+..+.||.+...-.+...... +... ..+.++.+.|++.|+..
T Consensus 161 I~~N~TlvFS~~QA~aaaeAGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~g~~T 230 (333)
T PTZ00411 161 IHCNLTLLFSFAQAVACAQAGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYYKKHGYKT 230 (333)
T ss_pred CceeEeEecCHHHHHHHHHcCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHHHHcCCCe
Confidence 4444444444444433 347788999999986543222111112 2122 34677888888888864
No 21
>PRK12346 transaldolase A; Provisional
Probab=39.85 E-value=22 Score=34.35 Aligned_cols=66 Identities=12% Similarity=0.109 Sum_probs=39.3
Q ss_pred CCChhhHHHHhHHHHHHh--cCCCceeecCCCCCCCCCCccccCCCCC-C---CCCHHHHHHHHHHCCCCcc
Q 021592 103 TVSCTDILTLVAREAVFL--GGGPFWAVPLGRRDGLTASESEANNLPS-P---FEPLQNITAKFTARGLDLK 168 (310)
Q Consensus 103 ~VScADilalAar~av~~--~GGP~~~v~~GR~D~~~s~~~~~~~lP~-p---~~~~~~l~~~F~~~Gls~~ 168 (310)
.|+|-=.+.+....|+.. +|-..+..+.||.|-..-.......++. . -..+.++.+.|++.|+..+
T Consensus 149 GI~~n~TliFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~~~~T~ 220 (316)
T PRK12346 149 GINCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARKPMDPYVVEEDPGVKSVRNIYDYYKQHRYETI 220 (316)
T ss_pred CCceeEEEecCHHHHHHHHHcCCCEEEecccHHHHhhhhccccccccccCCChHHHHHHHHHHHHHcCCCcE
Confidence 455555555555555443 5888999999999865322111011211 1 2347778888888887643
No 22
>PRK01362 putative translaldolase; Provisional
Probab=33.20 E-value=33 Score=31.19 Aligned_cols=73 Identities=18% Similarity=0.374 Sum_probs=44.3
Q ss_pred chHHHHHHHHHHHHhhCCCCCChhhHHHHhHHHHHHh--cCCCceeecCCCCCCCCCCccccCCCCCCCCCHHHHHHHHH
Q 021592 84 RGFEVIDAIKANLEKACPATVSCTDILTLVAREAVFL--GGGPFWAVPLGRRDGLTASESEANNLPSPFEPLQNITAKFT 161 (310)
Q Consensus 84 ~g~~~i~~iK~~le~~cp~~VScADilalAar~av~~--~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~ 161 (310)
.|+++|..++++ .|.+--...+....|+.. +|--.+..++||.|-..- ++..-+.++.+.++
T Consensus 89 ~G~~a~~~L~~~-------Gi~v~~T~vfs~~Qa~~Aa~aGa~yispyvgRi~d~g~---------dg~~~i~~~~~~~~ 152 (214)
T PRK01362 89 EGLKAVKALSKE-------GIKTNVTLIFSANQALLAAKAGATYVSPFVGRLDDIGT---------DGMELIEDIREIYD 152 (214)
T ss_pred HHHHHHHHHHHC-------CCceEEeeecCHHHHHHHHhcCCcEEEeecchHhhcCC---------CHHHHHHHHHHHHH
Confidence 377777666553 233333334444444333 355577999999876421 23345778888999
Q ss_pred HCCCCccccee
Q 021592 162 ARGLDLKDVVV 172 (310)
Q Consensus 162 ~~Gls~~elVa 172 (310)
+.|+..+=|+|
T Consensus 153 ~~~~~tkilaA 163 (214)
T PRK01362 153 NYGFDTEIIAA 163 (214)
T ss_pred HcCCCcEEEEe
Confidence 99987655544
No 23
>KOG0400 consensus 40S ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
Probab=32.09 E-value=36 Score=28.81 Aligned_cols=33 Identities=24% Similarity=0.414 Sum_probs=26.8
Q ss_pred CCHHHHHHHHHHCCCCccccee-ecccceeeccc
Q 021592 151 EPLQNITAKFTARGLDLKDVVV-LSGGHTIGFAQ 183 (310)
Q Consensus 151 ~~~~~l~~~F~~~Gls~~elVa-LsGaHtiG~~h 183 (310)
+++.+.+-.|+++||++.++=+ |--+|-||++.
T Consensus 31 ddvkeqI~K~akKGltpsqIGviLRDshGi~q~r 64 (151)
T KOG0400|consen 31 DDVKEQIYKLAKKGLTPSQIGVILRDSHGIGQVR 64 (151)
T ss_pred HHHHHHHHHHHHcCCChhHceeeeecccCcchhh
Confidence 4566777799999999999755 45999999875
No 24
>TIGR00875 fsa_talC_mipB fructose-6-phosphate aldolase, TalC/MipB family. This model represents a family that includes the E. coli transaldolase homologs TalC and MipB, both shown to be fructose-6-phosphate aldolases rather than transaldolases as previously thought. It is related to but distinct from the transaldolase family of E. coli TalA and TalB. The member from Bacillus subtilis becomes phosphorylated during early stationary phase but not during exponential growth.
Probab=31.67 E-value=44 Score=30.33 Aligned_cols=72 Identities=15% Similarity=0.335 Sum_probs=42.9
Q ss_pred chHHHHHHHHHHHHhhCCCCCChhhHHHHhHHHHHHh--cCCCceeecCCCCCCCCCCccccCCCCCCCCCHHHHHHHHH
Q 021592 84 RGFEVIDAIKANLEKACPATVSCTDILTLVAREAVFL--GGGPFWAVPLGRRDGLTASESEANNLPSPFEPLQNITAKFT 161 (310)
Q Consensus 84 ~g~~~i~~iK~~le~~cp~~VScADilalAar~av~~--~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~ 161 (310)
.|++.|..+++. .|.+--...+....|+.. +|--.+..+.||.|-..- ++-.-+.++...++
T Consensus 89 ~Gl~A~~~L~~~-------Gi~v~~T~vfs~~Qa~~Aa~aGa~yispyvgRi~d~g~---------dg~~~v~~~~~~~~ 152 (213)
T TIGR00875 89 EGLKAVKILKKE-------GIKTNVTLVFSAAQALLAAKAGATYVSPFVGRLDDIGG---------DGMKLIEEVKTIFE 152 (213)
T ss_pred HHHHHHHHHHHC-------CCceeEEEecCHHHHHHHHHcCCCEEEeecchHHHcCC---------CHHHHHHHHHHHHH
Confidence 377776666542 233332333444433322 365678999999876431 12344778888999
Q ss_pred HCCCCcccce
Q 021592 162 ARGLDLKDVV 171 (310)
Q Consensus 162 ~~Gls~~elV 171 (310)
..|++.+=|+
T Consensus 153 ~~~~~tkIla 162 (213)
T TIGR00875 153 NHAPDTEVIA 162 (213)
T ss_pred HcCCCCEEEE
Confidence 9999877444
No 25
>PF06163 DUF977: Bacterial protein of unknown function (DUF977); InterPro: IPR010382 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=20.07 E-value=1.6e+02 Score=24.82 Aligned_cols=28 Identities=32% Similarity=0.488 Sum_probs=18.1
Q ss_pred HHHHHHHHHhHhCCCCCC-CCCccccccc
Q 021592 280 KDFGASMVKMANIGVLTG-QDGEIRKNCR 307 (310)
Q Consensus 280 ~~Fa~Am~Km~~lgv~tg-~~GeiR~~C~ 307 (310)
.||-.|-.||..-+.... ++||||+.=+
T Consensus 72 ~dw~~~~~~~~~~~~~~~~pdg~~rry~~ 100 (127)
T PF06163_consen 72 KDWDKARKKLVDPDLIWKLPDGEIRRYDR 100 (127)
T ss_pred HHHHHhHHhhccchhhhhCCCcccccccc
Confidence 566777777755443333 6899998533
Done!