Query 021600
Match_columns 310
No_of_seqs 15 out of 17
Neff 1.8
Searched_HMMs 13730
Date Mon Mar 25 06:30:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021600.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021600hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1c3pa_ c.42.1.2 (A:) HDAC hom 51.5 9.3 0.00068 32.8 5.3 81 194-284 221-303 (372)
2 d1v54d_ f.23.1.1 (D:) Mitochon 35.8 7.8 0.00057 30.6 2.0 24 52-75 100-123 (144)
3 d1u5pa2 a.7.1.1 (A:1772-1872) 33.9 54 0.0039 21.0 8.1 55 252-306 2-62 (101)
4 d1rxwa2 c.120.1.2 (A:3-219) Fl 32.4 34 0.0025 26.3 5.4 85 50-138 75-163 (217)
5 d2pq6a1 c.87.1.10 (A:8-480) (I 32.2 23 0.0016 27.1 4.2 68 49-137 379-457 (473)
6 d1u5pa1 a.7.1.1 (A:1662-1771) 31.1 64 0.0047 21.0 7.9 55 253-307 7-67 (110)
7 d3beca1 b.105.1.1 (A:263-355) 27.9 6.3 0.00046 27.1 0.2 40 213-253 27-72 (93)
8 d1xp4a1 b.105.1.1 (A:294-386) 23.9 21 0.0015 24.9 2.4 37 217-253 31-73 (93)
9 d2bcqa1 a.60.6.1 (A:252-327) D 23.8 16 0.0011 24.6 1.6 54 86-141 21-74 (76)
10 d1f5na2 c.37.1.8 (A:7-283) Int 23.7 38 0.0027 27.4 4.3 79 181-266 190-269 (277)
11 d2nxoa1 c.94.1.1 (A:5-281) Hyp 21.6 71 0.0052 23.9 5.3 65 105-172 192-260 (277)
12 d1b43a2 c.120.1.2 (A:1-219) Fl 21.0 19 0.0014 28.0 1.8 86 50-138 76-165 (219)
13 d3c10a1 c.42.1.2 (A:515-900) H 20.5 23 0.0017 30.0 2.4 81 196-285 253-337 (386)
14 d1np3a2 c.2.1.6 (A:1-182) Clas 20.2 11 0.00084 30.7 0.3 27 221-249 101-127 (182)
No 1
>d1c3pa_ c.42.1.2 (A:) HDAC homologue {Aquifex aeolicus [TaxId: 63363]}
Probab=51.50 E-value=9.3 Score=32.84 Aligned_cols=81 Identities=19% Similarity=0.141 Sum_probs=55.2
Q ss_pred ccCCCCchHHHHHHhhhhhccCCCCCCceeecCCCCCCcCC--CCCCCCCCCCCcceeehhhHHHHHHHHHHHHHHHhhh
Q 021600 194 MHDGFDDEGWLKECKKHMVDTFPREDPFTILAPAGFDIDKH--QGPLPPPPEVDAVLLRVDFVREVDALLKEVRLEQNEA 271 (310)
Q Consensus 194 mhDGfdd~~WLk~crk~Mi~~FprEdpFtil~p~gFd~~~h--~Gpi~~p~e~Dd~LLRvDFvREVDeLlkEV~~eq~e~ 271 (310)
|-+|.+|++|+.-.++.+....-.-+|=-|++-+|||.-.. .|.+. |-.....++..+++++.. ---.
T Consensus 221 L~~g~~D~~y~~~~~~~l~p~~~~f~Pd~IvvsaG~D~~~~Dplg~l~---------lt~~~~~~~~~~~~~~~~-~~~~ 290 (372)
T d1c3pa_ 221 LPKGLNDNEFLFALEKSLEIVKEVFEPEVYLLQLGTDPLLEDYLSKFN---------LSNVAFLKAFNIVREVFG-EGVY 290 (372)
T ss_dssp ECTTCCHHHHHHHHHHHHHHHHHHCCCSEEEEECCSTTBTTCTTCSCC---------BCHHHHHHHHHHHHHHHC-SCEE
T ss_pred CCcccccHHHHHHHHHhHHHHHHhcCCcEEEEECCcccCCcCcccCCc---------CCHHHHHHHHHHHHHhCC-CeEE
Confidence 45889999999999987765555557779999999996432 23232 334455677888877642 1112
Q ss_pred hccCCCChHHHHH
Q 021600 272 QTAEGLDPESVAR 284 (310)
Q Consensus 272 ~~~~g~DpesVA~ 284 (310)
--.-||++.++|.
T Consensus 291 vleGGY~~~~~a~ 303 (372)
T d1c3pa_ 291 LGGGGYHPYALAR 303 (372)
T ss_dssp ECCCCCCHHHHHH
T ss_pred EEcCCCcHHHHHH
Confidence 2456799999885
No 2
>d1v54d_ f.23.1.1 (D:) Mitochondrial cytochrome c oxidase subunit IV {Cow (Bos taurus) [TaxId: 9913]}
Probab=35.82 E-value=7.8 Score=30.64 Aligned_cols=24 Identities=21% Similarity=0.632 Sum_probs=19.3
Q ss_pred ccCCCCCCCcHHHHHHHHHhhHHH
Q 021600 52 LEGMPPEYYDDEWQAQRREKTKEL 75 (310)
Q Consensus 52 legmp~e~yd~EWqa~qRektkel 75 (310)
..|=+|+-+++|||++|-|+.+++
T Consensus 100 v~p~~P~T~~~Ewqeaq~erm~~~ 123 (144)
T d1v54d_ 100 VYGPIPHTFEEEWVAKQTKRMLDM 123 (144)
T ss_dssp TCCCCCGGGSHHHHHHHHHHHHHT
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHc
Confidence 345578999999999998877654
No 3
>d1u5pa2 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=33.94 E-value=54 Score=20.97 Aligned_cols=55 Identities=16% Similarity=0.241 Sum_probs=33.9
Q ss_pred hhHHHHHHHHHHHHHHHhhh-hccCCCChHHHHHHHHHHHHHHH-H----HHHHHHHHHHh
Q 021600 252 DFVREVDALLKEVRLEQNEA-QTAEGLDPESVARRLKQQEKQKT-I----RQVEALLDLAI 306 (310)
Q Consensus 252 DFvREVDeLlkEV~~eq~e~-~~~~g~DpesVA~rLkqQEK~rt-i----rqVe~Ll~lA~ 306 (310)
.|.+++++++.=+...+.-- ....|=|+++|-..+++.+-..+ | ..|..|...|-
T Consensus 2 ~F~~~~~el~~Wl~e~~~~l~s~~~g~d~~~~~~ll~~h~~~~~~i~~~~~~~~~l~~~~~ 62 (101)
T d1u5pa2 2 QFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGK 62 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 58888888876555433222 24568899999888877665432 1 23445555443
No 4
>d1rxwa2 c.120.1.2 (A:3-219) Flap endonuclease-1 (Fen-1 nuclease) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=32.40 E-value=34 Score=26.33 Aligned_cols=85 Identities=18% Similarity=0.285 Sum_probs=52.6
Q ss_pred hhccCCCCCCCcHHHHHHHHHhhHHHHHhhhhhhHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHH----hhchHHH
Q 021600 50 TLLEGMPPEYYDDEWQAQRREKTKELHRRRQEEDEEERRKIEEYRDIGMRLKGYPEEDVRNARKLVSSF----IRAEEEV 125 (310)
Q Consensus 50 ~~legmp~e~yd~EWqa~qRektkel~r~r~~EeeEEer~~~eYReIg~rLK~yP~eev~kArklVssf----Ira~eev 125 (310)
.-.+|.||..-..++..|+..+.+.+..+....++-. .+-+....+....+.+.+..++.++.++ |.|.-|-
T Consensus 75 fVFDG~~p~~K~~~~~~R~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~vt~~~~~~~~~lL~~~gi~~i~Ap~EA 150 (217)
T d1rxwa2 75 FVFDGEPPEFKKAEIEERKKRRAEAEEMWIAALQAGD----KDAKKYAQAAGRVDEYIVDSAKTLLSYMGIPFVDAPSEG 150 (217)
T ss_dssp EEECCSCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTC----TTHHHHHHHHCCCCHHHHHHHHHHHHHTTCCEEECSSCH
T ss_pred EEECCCCCcchhhHHHHHHHHHHhhhhhhhhhhhhhh----HHHHHHHHhhccCCHHHHHHHHHHHHHcCceEEecCchH
Confidence 3579999999888887776655555444332211111 1123344556667788888888888774 6676666
Q ss_pred HHHHHHHHhhcCc
Q 021600 126 EERIEETAERGEL 138 (310)
Q Consensus 126 Ee~IeeAae~gEL 138 (310)
|...-.-..+|-.
T Consensus 151 eaqcA~L~~~g~v 163 (217)
T d1rxwa2 151 EAQAAYMAAKGDV 163 (217)
T ss_dssp HHHHHHHHHTTSS
T ss_pred HHHHHHHHhCCCe
Confidence 6666655555543
No 5
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}
Probab=32.17 E-value=23 Score=27.07 Aligned_cols=68 Identities=21% Similarity=0.353 Sum_probs=45.8
Q ss_pred hhhccCCC----CCCCcHHHHHHHHHhhHHHHHhhhhhhHHHHHHHHHHHHHhhhcc-CCCHHHHHHHHHHH------HH
Q 021600 49 ETLLEGMP----PEYYDDEWQAQRREKTKELHRRRQEEDEEERRKIEEYRDIGMRLK-GYPEEDVRNARKLV------SS 117 (310)
Q Consensus 49 e~~legmp----~e~yd~EWqa~qRektkel~r~r~~EeeEEer~~~eYReIg~rLK-~yP~eev~kArklV------ss 117 (310)
|..-.|.| |-++|+-=-|++= ++ =..+|.+|+ +...+++++|=+-| +.
T Consensus 379 Eal~~GVP~lv~P~~~DQ~~na~rv--------------------~~-~~G~G~~l~~~~t~~~l~~ai~~vl~d~~~~~ 437 (473)
T d2pq6a1 379 ESICAGVPMLCWPFFADQPTDCRFI--------------------CN-EWEIGMEIDTNVKREELAKLINEVIAGDKGKK 437 (473)
T ss_dssp HHHHHTCCEEECCCSTTHHHHHHHH--------------------HH-TSCCEEECCSSCCHHHHHHHHHHHHTSHHHHH
T ss_pred HHHHcCCCEEeccchhhhHHHHHHH--------------------HH-HcCeEEeeCCCcCHHHHHHHHHHHHcCChHHH
Confidence 77777777 7788875444221 11 124667776 55678888884444 34
Q ss_pred HhhchHHHHHHHHHHHhhcC
Q 021600 118 FIRAEEEVEERIEETAERGE 137 (310)
Q Consensus 118 fIra~eevEe~IeeAae~gE 137 (310)
|-+.+.++.+++++|.+.|.
T Consensus 438 ~r~~a~~l~~~~~~a~~~gg 457 (473)
T d2pq6a1 438 MKQKAMELKKKAEENTRPGG 457 (473)
T ss_dssp HHHHHHHHHHHHHHHTSTTC
T ss_pred HHHHHHHHHHHHHHHHhCCC
Confidence 88889999999999988776
No 6
>d1u5pa1 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=31.13 E-value=64 Score=20.99 Aligned_cols=55 Identities=18% Similarity=0.060 Sum_probs=32.7
Q ss_pred hHHHHHHHHHHHHHHH-hhhhccCCCChHHHHHHHHHHHHHH-----HHHHHHHHHHHHhh
Q 021600 253 FVREVDALLKEVRLEQ-NEAQTAEGLDPESVARRLKQQEKQK-----TIRQVEALLDLAIN 307 (310)
Q Consensus 253 FvREVDeLlkEV~~eq-~e~~~~~g~DpesVA~rLkqQEK~r-----tirqVe~Ll~lA~~ 307 (310)
|.++|++|+.=+..-+ .-.....|-|+++|-..+++.+..+ .-..|+.|.+.|..
T Consensus 7 F~~~~~el~~Wl~e~e~~l~~~~~g~d~~~~~~~~~~h~~~~~ei~~~~~~i~~l~~~~~~ 67 (110)
T d1u5pa1 7 FNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADS 67 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 6677777655443322 2233567889999999888876544 12344555555443
No 7
>d3beca1 b.105.1.1 (A:263-355) Penicillin-binding protein 5, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=27.92 E-value=6.3 Score=27.06 Aligned_cols=40 Identities=15% Similarity=0.144 Sum_probs=29.0
Q ss_pred ccCCCCCCceeecCCCCC------CcCCCCCCCCCCCCCcceeehhh
Q 021600 213 DTFPREDPFTILAPAGFD------IDKHQGPLPPPPEVDAVLLRVDF 253 (310)
Q Consensus 213 ~~FprEdpFtil~p~gFd------~~~h~Gpi~~p~e~Dd~LLRvDF 253 (310)
...+. ++++++.|.|-. +.--.+||.+|+..++.+-.+.+
T Consensus 27 ~l~~~-~di~~~~~k~~~~~~~~~~~~~~~~l~APi~kG~~vG~l~i 72 (93)
T d3beca1 27 SLGVD-KDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGTINF 72 (93)
T ss_dssp EEECS-SCEEEEEETTGGGGCEEEEEESSSSEESCBCTTCEEEEEEE
T ss_pred EEEEC-CCEEEEeecccccceeEEEEEcchhccCCccCCCEEEEEEE
Confidence 33444 559999999933 22236899999999999887765
No 8
>d1xp4a1 b.105.1.1 (A:294-386) D,D-carboxypeptidase DacA, C-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=23.93 E-value=21 Score=24.90 Aligned_cols=37 Identities=14% Similarity=0.373 Sum_probs=28.1
Q ss_pred CCCCceeecCCC------CCCcCCCCCCCCCCCCCcceeehhh
Q 021600 217 REDPFTILAPAG------FDIDKHQGPLPPPPEVDAVLLRVDF 253 (310)
Q Consensus 217 rEdpFtil~p~g------Fd~~~h~Gpi~~p~e~Dd~LLRvDF 253 (310)
..++++++.|.| +.+.-..+||..|+.-++++-.+-|
T Consensus 31 ~~~di~~~vpk~~~~~~~~~i~~~~~~l~APIkkG~~vG~l~i 73 (93)
T d1xp4a1 31 APEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTVVGHLTY 73 (93)
T ss_dssp CSSCEEEEEESSCSSCCCCCCCCBSSSBCSCBCTTSEEEEEEC
T ss_pred ECCceEEEEECCcccCcEEEEEecCCcEeccccCCCEEEEEEE
Confidence 356788999998 3344446899999999999887654
No 9
>d2bcqa1 a.60.6.1 (A:252-327) DNA polymerase lambda {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.82 E-value=16 Score=24.56 Aligned_cols=54 Identities=22% Similarity=0.303 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHhhcCchHH
Q 021600 86 ERRKIEEYRDIGMRLKGYPEEDVRNARKLVSSFIRAEEEVEERIEETAERGELTEL 141 (310)
Q Consensus 86 Eer~~~eYReIg~rLK~yP~eev~kArklVssfIra~eevEe~IeeAae~gELteL 141 (310)
+.-++..|+.....|++||.+ |..... +.+.=-=|..+-++|.|-.+.|.|..|
T Consensus 21 d~fr~~AY~~A~~~l~~l~~~-i~~~~~-l~~lpGiG~~i~~kI~Eil~tG~l~~l 74 (76)
T d2bcqa1 21 DKWRALGYAKAINALKSFHKP-VTSYQE-ACSIPGIGKRMAEKIIEILESGHLRKL 74 (76)
T ss_dssp CHHHHHHHHHHHHHHHSCCSC-CCCHHH-HHTSTTCCHHHHHHHHHHHHSSSCGGG
T ss_pred ChHHHHHHHHHHHHHHhCCcc-cCCHHH-HhcCCCccHHHHHHHHHHHHhCccHhh
Confidence 346788999999999999963 332222 233334488899999999999998765
No 10
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.74 E-value=38 Score=27.43 Aligned_cols=79 Identities=19% Similarity=0.247 Sum_probs=54.0
Q ss_pred cChhHHHHHHHhcccCCCCchHH-HHHHhhhhhccCCCCCCceeecCCCCCCcCCCCCCCCCCCCCcceeehhhHHHHHH
Q 021600 181 ATPAMRLLNDLLNMHDGFDDEGW-LKECKKHMVDTFPREDPFTILAPAGFDIDKHQGPLPPPPEVDAVLLRVDFVREVDA 259 (310)
Q Consensus 181 AtPAMrLLNdLLNmhDGfdd~~W-Lk~crk~Mi~~FprEdpFtil~p~gFd~~~h~Gpi~~p~e~Dd~LLRvDFvREVDe 259 (310)
.|| ...|++.|...+|++.... .+..|+....-||--+-|++..|. +... ...+. +.+.-=|+=+|+.+|++
T Consensus 190 ~t~-~eyLe~~l~~~~~~~~~~~~~N~~R~~i~~~F~dv~cf~Lp~P~--~~~~-l~~l~---~~~~~~L~~~F~~~v~~ 262 (277)
T d1f5na2 190 LTP-DEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCFVFDRPV--HRRK-LAQLE---KLQDEELDPEFVQQVAD 262 (277)
T ss_dssp CCH-HHHHHHHTCCCCCCSHHHHHHHHHHHHHHHHCSCEEEEECCCCS--CGGG-GGGGG---GSCGGGSCHHHHHHHHH
T ss_pred ccH-HHHHHHHHhcccCchhhhHhhhhHHHHHHHhcCCCeEEeCCCCc--chhh-hchhh---cCCccccCHHHHHHHHH
Confidence 344 6889999999999986554 457788888889987888888773 2221 11110 11222367899999999
Q ss_pred HHHHHHH
Q 021600 260 LLKEVRL 266 (310)
Q Consensus 260 LlkEV~~ 266 (310)
|-+-+-.
T Consensus 263 L~k~I~~ 269 (277)
T d1f5na2 263 FCSYIFS 269 (277)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9988754
No 11
>d2nxoa1 c.94.1.1 (A:5-281) Hypothetical protein SCo4506 {Streptomyces coelicolor [TaxId: 1902]}
Probab=21.61 E-value=71 Score=23.93 Aligned_cols=65 Identities=22% Similarity=0.271 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHhhchHHH----HHHHHHHHhhcCchHHHHHHHHhhhhhhhcchhHHHHHHHHHHHHHH
Q 021600 105 EEDVRNARKLVSSFIRAEEEV----EERIEETAERGELTELVLMVIWNRLDLARRDEEKDAIRSLDLLYRRV 172 (310)
Q Consensus 105 ~eev~kArklVssfIra~eev----Ee~IeeAae~gELteLvLmVIwnRLdlARrDdEkdAirsLDLLyRRV 172 (310)
++.-...++++..+.+|.+-+ +|-++.+++...+++=++.-.|+.+.. +=..+.+.+|...||++
T Consensus 192 ~~~p~~~~~~~~a~~~a~~~~~~~p~ea~~~~a~~~~i~~~~~~~~~~~~~~---~~~~~~~~~l~~f~~~~ 260 (277)
T d2nxoa1 192 EREPVITRKVHEAFLASRNLSLEEVEKVAEQAARWEAFDEDTLAKYFTTLDF---RFGAPQLEAVTEFARRV 260 (277)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSSSCHHHHHHHHHHSBC---CCSHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHcCCCHHHHHHHHHhCcC---CCCHHHHHHHHHHHHHH
Confidence 444455666666666665544 455555667777888888888887743 21233477788888875
No 12
>d1b43a2 c.120.1.2 (A:1-219) Flap endonuclease-1 (Fen-1 nuclease) {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=20.98 E-value=19 Score=28.04 Aligned_cols=86 Identities=26% Similarity=0.419 Sum_probs=57.7
Q ss_pred hhccCCCCCCCcHHHHHHHHHhhHHHHHhhhhhhHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHH----hhchHHH
Q 021600 50 TLLEGMPPEYYDDEWQAQRREKTKELHRRRQEEDEEERRKIEEYRDIGMRLKGYPEEDVRNARKLVSSF----IRAEEEV 125 (310)
Q Consensus 50 ~~legmp~e~yd~EWqa~qRektkel~r~r~~EeeEEer~~~eYReIg~rLK~yP~eev~kArklVssf----Ira~eev 125 (310)
.-.+|.||..-.++|+.|+..+.+....... ..++-...+.+....+.-..+.+.+..++.+..+| |.|..|-
T Consensus 76 FVFDG~~~~~K~~~~~~R~~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~lL~~~gv~~i~Ap~EA 152 (219)
T d1b43a2 76 YVFDGEPPEFKKKELEKRREAREEAEEKWRE---ALEKGEIEEARKYAQRATRVNEMLIEDAKKLLELMGIPIVQAPSEG 152 (219)
T ss_dssp EEECCSCCCCSSCSSTTCCCCTTHHHHHHHH---HHHHSCHHHHHHHHHTSGGGTHHHHHHHHHHHHHHTCCEEECSSCH
T ss_pred EEeCCCCCHHHhhhHHhhhhhHHHHHHHhhh---hhhccchhhhhhhhcccccCCHHHHHHHHHHHHHcCCceeeCchHH
Confidence 4578999888888887765444333332221 11222334556667777788889999999999886 7888888
Q ss_pred HHHHHHHHhhcCc
Q 021600 126 EERIEETAERGEL 138 (310)
Q Consensus 126 Ee~IeeAae~gEL 138 (310)
|...-.-..+|..
T Consensus 153 daqcA~L~~~g~v 165 (219)
T d1b43a2 153 EAQAAYMAAKGSV 165 (219)
T ss_dssp HHHHHHHHHHTSS
T ss_pred HHHHHHHHhcCCe
Confidence 8777777776654
No 13
>d3c10a1 c.42.1.2 (A:515-900) Histone deacetylase 7, HDAC7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.46 E-value=23 Score=30.01 Aligned_cols=81 Identities=17% Similarity=0.226 Sum_probs=51.1
Q ss_pred CCCCchHHHHHHhhhhh---ccCCCCCCceeecCCCCCCcCCCC-CCCCCCCCCcceeehhhHHHHHHHHHHHHHHHhhh
Q 021600 196 DGFDDEGWLKECKKHMV---DTFPREDPFTILAPAGFDIDKHQG-PLPPPPEVDAVLLRVDFVREVDALLKEVRLEQNEA 271 (310)
Q Consensus 196 DGfdd~~WLk~crk~Mi---~~FprEdpFtil~p~gFd~~~h~G-pi~~p~e~Dd~LLRvDFvREVDeLlkEV~~eq~e~ 271 (310)
.|.+|++|+...++.+. +.| .|=-|++-+|||.-.... |+- ..-|.....+.+.+.|.++..----.
T Consensus 253 ~~~~d~~yl~~~~~~l~~~~~~f---~PdlIvvsaG~D~~~~D~~pLg------~l~lt~~~~~~~~~~l~~~~~~~vv~ 323 (386)
T d3c10a1 253 PPMGDPEYLAAFRIVVMPIAREF---SPDLVLVSAGFDAAEGHPAPLG------GYHVSAKCFGYMTQQLMNLAGGAVVL 323 (386)
T ss_dssp SCCBHHHHHHHHHHTHHHHHHHH---CCSEEEEEECCTTBTTCCGGGC------CCBBCHHHHHHHHHHHTTSGGGCEEE
T ss_pred CCCChHHHHHHHHHHHHHHHHhc---CCCEEEEeCCccccccCcchhh------cCccCHHHHHHHHHHHHHHcCCCEEE
Confidence 66779999999988664 556 455899999999865331 210 12234556677887777653101111
Q ss_pred hccCCCChHHHHHH
Q 021600 272 QTAEGLDPESVARR 285 (310)
Q Consensus 272 ~~~~g~DpesVA~r 285 (310)
-..-||+++++|..
T Consensus 324 vleGGY~~~~l~~~ 337 (386)
T d3c10a1 324 ALEGGHDLTAICDA 337 (386)
T ss_dssp EECSCCCHHHHHHH
T ss_pred EeCCCCChhHHHHH
Confidence 24567999888754
No 14
>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.15 E-value=11 Score=30.74 Aligned_cols=27 Identities=26% Similarity=0.576 Sum_probs=21.1
Q ss_pred ceeecCCCCCCcCCCCCCCCCCCCCccee
Q 021600 221 FTILAPAGFDIDKHQGPLPPPPEVDAVLL 249 (310)
Q Consensus 221 Ftil~p~gFd~~~h~Gpi~~p~e~Dd~LL 249 (310)
-++.|.-||+| |.|.|.||...|-++.
T Consensus 101 ~~L~FaHGfnI--h~~~I~pp~~vdV~mv 127 (182)
T d1np3a2 101 ATLAFAHGFSI--HYNQVVPRADLDVIMI 127 (182)
T ss_dssp CEEEESCCHHH--HTTSSCCCTTCEEEEE
T ss_pred cEEEEeccceE--EeeeeecCCCCceEee
Confidence 46778899998 8999999966665543
Done!