Query 021602
Match_columns 310
No_of_seqs 121 out of 822
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 06:32:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021602.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021602hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ct4_A PTS-dependent dihydroxy 100.0 1E-108 4E-113 788.3 27.1 261 1-266 70-332 (332)
2 2iu4_A DHA-DHAQ, dihydroxyacet 100.0 1E-108 4E-113 788.4 23.7 262 1-267 66-330 (336)
3 1oi2_A Hypothetical protein YC 100.0 4E-108 1E-112 789.8 25.0 267 1-268 78-365 (366)
4 1un8_A Dihydroxyacetone kinase 100.0 1.1E-99 4E-104 766.6 26.3 255 1-268 73-330 (552)
5 3nyi_A FAT acid-binding protei 87.7 2.2 7.6E-05 39.5 9.1 96 12-121 66-166 (297)
6 3fdj_A DEGV family protein; GU 87.2 3 0.0001 38.2 9.6 195 12-246 61-276 (278)
7 3jr7_A Uncharacterized EGV fam 87.1 2.2 7.5E-05 39.7 8.7 196 12-235 81-287 (298)
8 3pl5_A SMU_165, putative uncha 86.5 2.4 8.1E-05 40.0 8.6 183 13-235 98-303 (320)
9 1pzx_A Hypothetical protein AP 78.2 8.1 0.00028 35.5 8.6 97 12-122 63-164 (289)
10 2dt8_A DEGV family protein; fa 77.0 8.2 0.00028 35.3 8.2 93 12-122 62-158 (280)
11 2bz1_A GTP cyclohydrolase II; 73.0 1.8 6.2E-05 38.4 2.6 56 4-59 53-143 (196)
12 3gx1_A LIN1832 protein; APC633 71.8 21 0.00071 29.1 8.7 77 17-116 49-125 (130)
13 3ct6_A PTS-dependent dihydroxy 71.3 6.9 0.00024 32.2 5.6 79 15-119 45-125 (131)
14 3egl_A DEGV family protein; al 68.6 6.1 0.00021 36.3 5.2 197 13-249 44-264 (277)
15 3b48_A Uncharacterized protein 66.3 11 0.00038 30.7 5.9 77 15-113 50-129 (135)
16 3lup_A DEGV family protein; PS 63.0 12 0.00039 34.5 5.9 195 12-246 65-282 (285)
17 3fys_A Protein DEGV; fatty aci 58.1 48 0.0016 30.9 9.4 185 12-235 96-301 (315)
18 2g7z_A Conserved hypothetical 57.7 23 0.0008 32.3 7.0 94 12-122 66-163 (282)
19 1mgp_A Hypothetical protein TM 52.8 26 0.00091 32.7 6.6 94 12-122 89-188 (313)
20 2yxd_A Probable cobalt-precorr 42.9 85 0.0029 24.4 7.4 56 3-66 102-157 (183)
21 3lub_A Putative creatinine ami 40.0 74 0.0025 28.6 7.3 60 151-226 83-143 (254)
22 3djh_A Macrophage migration in 39.3 16 0.00054 28.6 2.4 41 190-230 57-97 (114)
23 1uiz_A MIF, macrophage migrati 37.1 21 0.00071 27.6 2.7 43 188-230 56-98 (115)
24 2lnd_A De novo designed protei 36.6 62 0.0021 25.4 5.3 51 150-213 24-74 (112)
25 3gdw_A Sigma-54 interaction do 35.5 45 0.0015 27.4 4.7 73 16-111 48-122 (139)
26 4dh4_A MIF; trimer, isomerase; 35.5 16 0.00055 28.4 1.9 42 189-230 57-98 (114)
27 3b64_A Macrophage migration in 35.4 20 0.00069 27.6 2.4 43 188-230 56-98 (112)
28 2os5_A Acemif; macrophage migr 34.1 28 0.00096 27.1 3.1 44 187-230 55-98 (119)
29 1hfo_A Migration inhibitory fa 33.7 22 0.00074 27.3 2.3 43 188-230 55-97 (113)
30 3fwu_A Macrophage migration in 33.4 19 0.00066 29.3 2.1 43 188-230 77-119 (133)
31 1uf3_A Hypothetical protein TT 29.7 51 0.0018 27.0 4.1 37 5-41 37-75 (228)
32 2q8u_A Exonuclease, putative; 29.1 29 0.001 31.4 2.7 51 5-57 66-122 (336)
33 2w43_A Hypothetical 2-haloalka 28.8 1E+02 0.0036 24.5 5.8 52 3-63 116-169 (201)
34 3fwt_A Macrophage migration in 28.6 19 0.00066 29.2 1.2 42 189-230 78-119 (133)
35 2xcz_A Possible ATLS1-like lig 28.4 25 0.00085 27.1 1.8 43 188-230 56-98 (115)
36 3t5s_A Gilaa.00834.A, macropha 26.6 19 0.00065 29.4 0.9 43 188-230 77-119 (135)
37 2id1_A Hypothetical protein; a 26.5 2E+02 0.0069 23.6 7.1 92 162-260 2-110 (130)
38 2wkb_A Macrophage migration in 24.9 26 0.00089 27.7 1.4 43 188-230 56-98 (125)
39 3jwg_A HEN1, methyltransferase 23.9 1.7E+02 0.0059 23.8 6.4 67 3-69 104-195 (219)
40 4f0j_A Probable hydrolytic enz 23.5 77 0.0027 26.1 4.1 36 186-227 44-79 (315)
41 1boo_A Protein (N-4 cytosine-s 23.4 69 0.0024 29.3 4.1 52 18-69 65-123 (323)
42 3e05_A Precorrin-6Y C5,15-meth 23.0 2.8E+02 0.0097 22.3 7.6 57 3-64 110-166 (204)
43 1bs0_A Protein (8-amino-7-oxon 21.7 1.8E+02 0.0061 25.7 6.5 52 15-71 154-208 (384)
44 3ihu_A Transcriptional regulat 21.5 1.6E+02 0.0056 24.8 5.9 63 162-237 17-83 (222)
45 4fbl_A LIPS lipolytic enzyme; 21.2 89 0.003 26.7 4.2 34 187-226 49-83 (281)
46 1pdo_A Mannose permease; phosp 21.1 1.2E+02 0.0039 24.3 4.6 78 16-115 45-122 (135)
47 1byr_A Protein (endonuclease); 21.1 1.1E+02 0.0038 23.9 4.4 51 10-64 7-60 (155)
48 2dr1_A PH1308 protein, 386AA l 20.7 1.8E+02 0.0061 25.5 6.2 53 14-71 132-186 (386)
49 3e8s_A Putative SAM dependent 20.7 1.5E+02 0.005 23.9 5.3 64 2-65 117-208 (227)
No 1
>3ct4_A PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DHAK; dihydroxyacetone kinase subunit, tranferase; 2.50A {Lactococcus lactis subsp}
Probab=100.00 E-value=1.1e-108 Score=788.29 Aligned_cols=261 Identities=36% Similarity=0.588 Sum_probs=248.0
Q ss_pred CcceeecCCccCCCCHHHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 021602 1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR 80 (310)
Q Consensus 1 MLdAav~G~VFaSPs~~qIl~ai~~v~~~~GvL~iv~NYtGD~LNFgmA~E~A~~~Gi~v~~ViV~DDvA~~~~~~~~gR 80 (310)
||||||||+||||||++||++|||++++++|||+||||||||+||||||+|+|+++||+|++|+|+||||++++.+++||
T Consensus 70 MLdAAv~G~VFaSPs~~qi~~aikav~~g~GvL~ivkNYtGDvlNF~mAaE~a~~eGi~v~~VvV~DDvA~~~~~~~~gR 149 (332)
T 3ct4_A 70 MLSAAVCGAIFTSPTPDQIYEAIKSADEGAGVLLIIKNYLGDVMNFEMAREMAEMEEIKVEQIIVDDDIAVENSLYTQGR 149 (332)
T ss_dssp SBSEEEEEEETCCCCHHHHHHHHHHHCCSSCEEEEEESCHHHHHHHHHHHHHHHHTTCCEEEEEECCBCSSSSCTTCSSS
T ss_pred ccceeeecccCCCCCHHHHHHHHHhhcCCCCEEEEeCCcHHHhhcHHHHHHHHHhcCCcEEEEEeCCcccCCCcCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999987778999
Q ss_pred ccccchhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccceeeccccccCC-CCCCCCCCCCeeEEeccccCCCCccccc
Q 021602 81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPG-QVTSDRLGPGKMELGLGIHGEPGAAVAD 159 (310)
Q Consensus 81 RGlAGtvlv~KIaGAaAe~G~sL~ev~~~a~~~~~~~~Tigvals~c~~Pg-~~~~f~L~~~emEiGmGIHGEpG~~r~~ 159 (310)
||+|||||||||+|||||+|+||+||++++|++++|+|||||+|++||+|+ ++|+|+|++||||||||||||||++|.+
T Consensus 150 RGvAGtvlv~KIaGAaAe~G~~L~ev~~~a~~~~~~~~SiGval~~ctvP~~g~p~f~l~~~emE~G~GIHGEpG~~r~~ 229 (332)
T 3ct4_A 150 RGVAGTVLVHKILGAAAHQEASLDEIKDLADKVVKNIKTIGLALSAATVPEVGKPGFVLDDNEIEYGVGIHSEPGYRREK 229 (332)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTEEEEEEESSCCCCC----------CCEEEETCCTTSCCCSEEEE
T ss_pred CchhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECCCcCCCCCCCCCCccCCCceEeccccCCCCccccCC
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeeeccccccCCC
Q 021602 160 LQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMA 239 (310)
Q Consensus 160 ~~sa~elv~~ml~~ll~~~r~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG~~~TSldm~ 239 (310)
++|++|++++|+++|+++ +++++||+|+|||||||+||.+|||++++++.++|+++ ||+|+|+|+|+|||||||+
T Consensus 230 ~~~a~el~~~m~~~ll~~----~~~~~gd~v~vlVNgLG~t~~~El~i~~~~v~~~L~~~-gi~v~r~~vG~~~TSldM~ 304 (332)
T 3ct4_A 230 MKTSYELATELVGKLKEE----FKFEAGQKYGILVNGMGATPLMEQFIFMNDVAKLLTEE-NIEILFKKVGNYMTSIDMA 304 (332)
T ss_dssp CCCHHHHHHHHHHHHHHH----HTCCTTCEEEEEEEECBSSCHHHHHHHHHHHHHHHHTT-TCEEEEEEEECSSCCTTBC
T ss_pred CCCHHHHHHHHHHHHHhh----cCcCCCCeEEEEEECCCCcCHHHHHHHHHHHHHHHHHC-CCeEEEEEeeccccccCCC
Confidence 999999999999999997 88999999999999999999999999999999999888 9999999999999999999
Q ss_pred cceEEEecccH-HHHHhhcCCCCCCCCC
Q 021602 240 GFSISIMKADE-VILKHLDATTKAPHWP 266 (310)
Q Consensus 240 GfSiTLl~ldd-~ll~lldaP~~ap~w~ 266 (310)
||||||+|+|| |+++|||+||+||+|+
T Consensus 305 G~SiTll~ldd~el~~lldaP~~tp~w~ 332 (332)
T 3ct4_A 305 GLSLTMIKLEDDQWLKNLNEDVKTISWG 332 (332)
T ss_dssp EEEEEEEECCSHHHHHHHTSCCBCSCC-
T ss_pred ccEEEEEECCHHHHHHHhCCCCCCCCCC
Confidence 99999999999 9999999999999995
No 2
>2iu4_A DHA-DHAQ, dihydroxyacetone kinase; transferase, CO-activa kinase; HET: HIQ; 1.96A {Lactococcus lactis} PDB: 2iu6_A
Probab=100.00 E-value=1.3e-108 Score=788.37 Aligned_cols=262 Identities=32% Similarity=0.497 Sum_probs=257.2
Q ss_pred CcceeecCCccCCCCHHHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 021602 1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR 80 (310)
Q Consensus 1 MLdAav~G~VFaSPs~~qIl~ai~~v~~~~GvL~iv~NYtGD~LNFgmA~E~A~~~Gi~v~~ViV~DDvA~~~~~~~~gR 80 (310)
||||||||+||||||++||++|||++++++|||+||||||||+||||||+|+|+++||+|++|+|+||||++++.+++||
T Consensus 66 MLdAAv~G~VFaSPs~~qi~~aikav~~g~GvL~ivkNYtGDvlNF~mAaE~a~~eGi~v~~VvV~DDvA~~~~~~~~gR 145 (336)
T 2iu4_A 66 MLAAAVTGPLFIPPKSKNILKAIRQVNSGKGVFVIIKNFEADLKEFNEAIKEARTEGIDVRYIVSHDDISVNAYNFHKRH 145 (336)
T ss_dssp SBSEEEEEEETSCCCHHHHHHHHHHHCSSSCEEEEEESCHHHHHHHHHHHHHHHHTTCCEEEEEECCBCHHHHHTCCSCC
T ss_pred ccceeeecccCCCCCHHHHHHHHHhhcCCCCEEEEeCCcHHHhhcHHHHHHHHHhCCCcEEEEEecCceecCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877778999
Q ss_pred ccccchhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccceeeccccccCCCCCCCCCCCCeeEEeccccCCCCcccccC
Q 021602 81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADL 160 (310)
Q Consensus 81 RGlAGtvlv~KIaGAaAe~G~sL~ev~~~a~~~~~~~~Tigvals~c~~Pg~~~~f~L~~~emEiGmGIHGEpG~~r~~~ 160 (310)
||+|||||||||+|||||+|+||+||++++|++++|+|||||+|++||+|+.+|+|+|++||||||||||||||++|.++
T Consensus 146 RGvAGtvlv~KIaGAaAe~G~~L~ev~~~a~~~~~~~~SiGvaL~~ctvP~~~p~F~l~~~emE~G~GIHGEpG~~r~~~ 225 (336)
T 2iu4_A 146 RGVAGTILLHKILGAFAKEGGSIDEIEQLALSLSPEIYTLGVALAPVHFPHQKTSFVLAEDEVSFGIGIXGEPGYRVEKF 225 (336)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCCHHHHHHHHHHHGGGEEEEEEEEECCEETTTEESSCCCTTEEEESCCCCCCCCSEEEEC
T ss_pred CchhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECCCccCCCCCCCCccCCCceEecccccCCCCccccCC
Confidence 99999999999999999999999999999999999999999999999999998999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCC--CCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeeeccccccCC
Q 021602 161 QPVDVVVSHVLKQILSTETNYVPIT--RGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDM 238 (310)
Q Consensus 161 ~sa~elv~~ml~~ll~~~r~~l~~~--~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG~~~TSldm 238 (310)
+|+++++++|+++|+++ ++++ +||+|+|||||||+||.||||++++++.++|+++ ||+|+|+|+|+|||||||
T Consensus 226 ~~a~el~~~m~~~ll~~----l~~~~~~gd~v~vlVNgLG~t~~~El~i~~~~v~~~L~~~-gi~v~r~~vG~~~TSLdM 300 (336)
T 2iu4_A 226 EGSERIAIELVNKLKAE----INWQKKANKNYILLVNGLGSTTLMELYSFQYDVMRLLELE-GLSVKFCKVGNLMTSCDM 300 (336)
T ss_dssp CCHHHHHHHHHHHHHHH----HCGGGCSCCEEEEEEEECBSSCHHHHHHHHHHHHHHHHHT-TCEEEEEEEECSSCCTTB
T ss_pred CCHHHHHHHHHHHHHhh----CccccCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHHC-CCeEEEEeeecccCccCC
Confidence 99999999999999997 7888 8999999999999999999999999999999888 999999999999999999
Q ss_pred CcceEEEecccH-HHHHhhcCCCCCCCCCC
Q 021602 239 AGFSISIMKADE-VILKHLDATTKAPHWPV 267 (310)
Q Consensus 239 ~GfSiTLl~ldd-~ll~lldaP~~ap~w~~ 267 (310)
+||||||+|+|| |+++|||+||+||+|+.
T Consensus 301 ~G~SiTll~ldd~el~~lldaP~~tpa~~~ 330 (336)
T 2iu4_A 301 SGISLTLCSVKDPKWLDYLNVPTGAFAWLE 330 (336)
T ss_dssp EEEEEEEEECCSTHHHHHHHSCCCCTTCCC
T ss_pred CccEEEEEECCHHHHHHHhcCCCCCcccch
Confidence 999999999999 99999999999999974
No 3
>1oi2_A Hypothetical protein YCGT; kinase, dihydroxyacetone kinase; 1.75A {Escherichia coli} SCOP: c.119.1.2 PDB: 1oi3_A 1uod_A* 1uoe_A 3pnl_A* 3pnk_A* 3pno_A 3pnq_A 3pnm_A
Probab=100.00 E-value=4.1e-108 Score=789.77 Aligned_cols=267 Identities=39% Similarity=0.624 Sum_probs=251.1
Q ss_pred CcceeecCCccCCCCHHHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 021602 1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR 80 (310)
Q Consensus 1 MLdAav~G~VFaSPs~~qIl~ai~~v~~~~GvL~iv~NYtGD~LNFgmA~E~A~~~Gi~v~~ViV~DDvA~~~~~~~~gR 80 (310)
||||||||+||||||++||++|||++++++|||+||||||||+||||||+|+|+++||+|++|+|+||||++++.+++||
T Consensus 78 MLdaAv~G~VFaSPs~~qi~~ai~av~~g~GvL~ivkNYtGDvlNF~mA~E~a~~eGi~v~~Vvv~DDvAv~~~~~~~gR 157 (366)
T 1oi2_A 78 MLSGACPGEIFTSPTPDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDSLYTAGR 157 (366)
T ss_dssp SBSEEEEEEETSCCCHHHHHHHHHHHCCSSCEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEEECCBCSCBSCTTCSSB
T ss_pred ccceeeecccCCCCCHHHHHHHHHhhcCCCCEEEEeCCcHHHhhcHHHHHHHHHhcCCcEEEEEecCceecCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999987778999
Q ss_pred ccccchhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccceeeccccccCC-CCCCCCCCCCeeEEeccccCCCCccccc
Q 021602 81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPG-QVTSDRLGPGKMELGLGIHGEPGAAVAD 159 (310)
Q Consensus 81 RGlAGtvlv~KIaGAaAe~G~sL~ev~~~a~~~~~~~~Tigvals~c~~Pg-~~~~f~L~~~emEiGmGIHGEpG~~r~~ 159 (310)
||+|||||||||+|||||+|+||+||++++|+++++++||||||++||+|+ ++|+|+|++||||||||||||||++|.+
T Consensus 158 RGvAGtvlv~KiaGAaAe~G~sL~ev~~~a~~~~~~~~SiGvaL~~ctvP~~g~p~F~l~~~emE~G~GIHGEPG~~r~~ 237 (366)
T 1oi2_A 158 RGVANTVLIEKLVGAAAERGDSLDACAELGRKLNNQGHSIGIALGACTVPAAGKPSFTLADNEMEFGVGIHGEPGIDRRP 237 (366)
T ss_dssp CCCTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHTTEEEEEEEEECC-----------CCTTEEEETCCTTSCCCSEEEE
T ss_pred CchhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECCCcCCCCCCCCCCccCCCceEeccccCCCCccccCC
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcc--------------------cCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhh
Q 021602 160 LQPVDVVVSHVLKQILST--------------------ETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLE 219 (310)
Q Consensus 160 ~~sa~elv~~ml~~ll~~--------------------~r~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~ 219 (310)
++|+++++++|+++|+++ +|.++++++||+|+|||||||+||.+|||++++++.++|+++
T Consensus 238 ~~sa~elv~~m~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~v~vLVNgLG~T~~~El~iv~~~v~~~L~~~ 317 (366)
T 1oi2_A 238 FSSLDQTVDEMFDTLLVNGSYHRTLRFWDYQQGSWQEEQQTKQPLQSGDRVIALVNNLGATPLSELYGVYNRLTTRCQQA 317 (366)
T ss_dssp CCCHHHHHHHHHHHHHHSCCEEEEEEEEETTTTEEEEEEEEECCCCTTCEEEEEEEECBSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcccccccccccccccccccccccccCCCCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHHC
Confidence 999999999999999986 145689999999999999999999999999999999999988
Q ss_pred cCCeEEEeeeeccccccCCCcceEEEecccHHHHHhhcCCCCCCCCCCC
Q 021602 220 HGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDATTKAPHWPVG 268 (310)
Q Consensus 220 ~gi~v~r~~vG~~~TSldm~GfSiTLl~ldd~ll~lldaP~~ap~w~~~ 268 (310)
||+|+|+++|+|||||||+||||||+|+|||+++|||+||+||+|+|+
T Consensus 318 -gi~v~r~~vG~y~TSLdM~G~SiTLl~lddel~~lldaP~~tpa~~~g 365 (366)
T 1oi2_A 318 -GLTIERNLIGAYCTSLDMTGFSITLLKVDDETLALWDAPVHTPALNWG 365 (366)
T ss_dssp -TCEEEEEEEECSSCCTTBEEEEEEEEEECHHHHHHHHSCEESSSCEEC
T ss_pred -CCeEEEEeeecccCCCCCCccEEEEEecCHHHHHHhCCCCCCCcCCCC
Confidence 999999999999999999999999999999999999999999999975
No 4
>1un8_A Dihydroxyacetone kinase; transferase; HET: MYY; 2.5A {Citrobacter freundii} SCOP: a.208.1.1 c.119.1.2 PDB: 1un9_A*
Probab=100.00 E-value=1.1e-99 Score=766.59 Aligned_cols=255 Identities=50% Similarity=0.782 Sum_probs=250.0
Q ss_pred CcceeecCCccCCCCHHHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 021602 1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR 80 (310)
Q Consensus 1 MLdAav~G~VFaSPs~~qIl~ai~~v~~~~GvL~iv~NYtGD~LNFgmA~E~A~~~Gi~v~~ViV~DDvA~~~~~~~~gR 80 (310)
||||||||+||||||++||++|||++++++|||+||||||||+||||||+|+|+++||+|++|+|+||||++++ +||
T Consensus 73 ml~aav~G~vFaSPs~~~i~~ai~a~~~g~Gvl~ivkNYtGD~lnF~~A~e~a~~~gi~v~~v~v~DDva~~~~---~~R 149 (552)
T 1un8_A 73 MLTAAVCGDVFASPSVDAVLTAIQAVTGEAGCLLIVKNYTGDRLNFGLAAEKARRLGYNVEMLIVGDDISLPDN---KHP 149 (552)
T ss_dssp SBSEEEEEEETSCCCHHHHHHHHHHHCCTTCEEEEEESCHHHHHHHHHHHHHHHHTTCCEEEEEECCBCSCTTC---SSC
T ss_pred ccceeeecCcCCCCCHHHHHHHHHhhcCCCCEEEEecccHHHHhhHHHHHHHHHhcCCcEEEEEecCcccCCCC---CCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999864 899
Q ss_pred ccccchhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccceeeccccccCCCCCCC-CCCCCeeEEeccccCCCCccccc
Q 021602 81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSD-RLGPGKMELGLGIHGEPGAAVAD 159 (310)
Q Consensus 81 RGlAGtvlv~KIaGAaAe~G~sL~ev~~~a~~~~~~~~Tigvals~c~~Pg~~~~f-~L~~~emEiGmGIHGEpG~~r~~ 159 (310)
||+|||||||||+||+||+|+||+||++++|++++|+|||||+|++||+|+++|+| +|++||||||||||||||++|.+
T Consensus 150 RGvaGtv~v~KiaGAaAe~G~~L~ev~~~a~~~~~~~~s~gval~~ctvP~~~~~f~~l~~~e~E~G~GiHGEpG~~~~~ 229 (552)
T 1un8_A 150 RGIAGTILVHKIAGYFAERGYNLATVLREAQYAASNTFSLGVALSSCHLPQETDAAPRHHPGHAELGMGIHGEPGASVID 229 (552)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTEEEEEEEEECCCCSSCCSSSCCBCTTCEEETCCTTCCCCSEEES
T ss_pred CchhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhhceEEEEEcCCccCCCCCCCcccCCCCceEeccccCCCCCccCCC
Confidence 99999999999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeee--ccccccC
Q 021602 160 LQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG--SFMTSLD 237 (310)
Q Consensus 160 ~~sa~elv~~ml~~ll~~~r~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG--~~~TSld 237 (310)
+.|+++++++|+++|+++ ++++ |+|+|||||||+||.||||++++++.++|+++ | +|+|+| +||||||
T Consensus 230 ~~~a~~~~~~l~~~ll~~----~~~~--~~v~~lvN~lG~t~~~El~i~~~~v~~~L~~~-g---~~~~vG~~~~~Tsld 299 (552)
T 1un8_A 230 TQNSAQVVNLMVDKLLAA----LPET--GRLAVMINNLGGVSVAEMAIITRELASSPLHS-R---IDWLIGPASLVTALD 299 (552)
T ss_dssp CCBHHHHHHHHHHHHHHH----SCSS--CCEEEEEEECBCSCHHHHHHHHHHHHTSTTGG-G---EEEEEEEECSSCCTT
T ss_pred CCCHHHHHHHHHHHHHhh----CCCc--CcEEEEEeCCCCCCHHHHHHHHHHHHHHHHHc-C---CeeeeCCccccCccC
Confidence 999999999999999987 7877 99999999999999999999999999999888 8 999999 9999999
Q ss_pred CCcceEEEecccHHHHHhhcCCCCCCCCCCC
Q 021602 238 MAGFSISIMKADEVILKHLDATTKAPHWPVG 268 (310)
Q Consensus 238 m~GfSiTLl~ldd~ll~lldaP~~ap~w~~~ 268 (310)
|+||||||+++|||+++|||+||++|+|++.
T Consensus 300 m~G~SiTll~ld~el~~~ldap~~~~~~~~~ 330 (552)
T 1un8_A 300 MKGFSLTAIVLEESIEKALLTEVETSNWPTP 330 (552)
T ss_dssp BEEEEEEEEECCTTHHHHHHSCCCCSSCCCC
T ss_pred CCcceEEeecCCHHHHHHhcCCCCCCCCCCc
Confidence 9999999999999999999999999999975
No 5
>3nyi_A FAT acid-binding protein; stearic acid, DEGV family protein, structural genomics, PSI- protein structure initiative; HET: STE; 1.90A {Eubacterium ventriosum} SCOP: c.119.1.0
Probab=87.68 E-value=2.2 Score=39.50 Aligned_cols=96 Identities=11% Similarity=0.086 Sum_probs=68.6
Q ss_pred CCCCHHHHHHHHHhc-cCCCceEEEe--eccccccccHHHHHHHHHhc--CCcEEEEEecccccCCCCCCCCCcccccch
Q 021602 12 ASPPVDSILAGIHAV-TGPMGCLLIV--TNYTGDRLNFGLAAEQAKSE--GYKVEIVIVGDDCALPPPRGIAGRRGLAGT 86 (310)
Q Consensus 12 aSPs~~qIl~ai~~v-~~~~GvL~iv--~NYtGD~LNFgmA~E~A~~~--Gi~v~~ViV~DDvA~~~~~~~~gRRGlAGt 86 (310)
+.||+.++.++.+.. ..+..||+|- ..-+|=.=+.-+|+++.+++ +.+|..| |- |..-.|.
T Consensus 66 Sqps~~~~~~~f~~l~~~g~~ii~i~iSs~LSGTy~sA~~aa~~~~e~~~~~~I~Vi---DS-----------~~~s~g~ 131 (297)
T 3nyi_A 66 SLPSVESYADVFRSFVEQGFPVVCFTITTLFSGSYNSAINAKSLVLEDYPDANICVI---DS-----------KQNTVTQ 131 (297)
T ss_dssp ECCCHHHHHHHHHHHHTTTCCEEEEESCTTTCSHHHHHHHHHHHHHHHCTTCCEEEE---EC-----------SCCHHHH
T ss_pred cCCCHHHHHHHHHHHHHCCCeEEEEECCCcHhHHHHHHHHHHHHHHhhCCCCeEEEE---eC-----------CchHHHH
Confidence 358999999998765 4557788776 55677777788888887554 4454432 31 2233455
Q ss_pred hhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccce
Q 021602 87 ILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMG 121 (310)
Q Consensus 87 vlv~KIaGAaAe~G~sL~ev~~~a~~~~~~~~Tig 121 (310)
-++..-|-.++++|.|++|+.+..++..+++++.=
T Consensus 132 g~~v~~A~~l~~~G~s~~eI~~~l~~~~~~~~~~f 166 (297)
T 3nyi_A 132 ALLIDQFVRMLEDGLSFEQAMSKLDALMASARIFF 166 (297)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCEEEE
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcEEEE
Confidence 55555578899999999999999999998877653
No 6
>3fdj_A DEGV family protein; GUT microbiome, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE P6G PG4; 1.80A {Eubacterium eligens} SCOP: c.119.1.0
Probab=87.18 E-value=3 Score=38.24 Aligned_cols=195 Identities=11% Similarity=0.108 Sum_probs=110.2
Q ss_pred CCCCHHHHHHHHHhccCCCceEEEe--eccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCcccccchhhH
Q 021602 12 ASPPVDSILAGIHAVTGPMGCLLIV--TNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILV 89 (310)
Q Consensus 12 aSPs~~qIl~ai~~v~~~~GvL~iv--~NYtGD~LNFgmA~E~A~~~Gi~v~~ViV~DDvA~~~~~~~~gRRGlAGtvlv 89 (310)
+.||+.++.++.+ ....||+|- ..-+|=.=+.-+|+++..++--..++.+|+- |..-.|.-++
T Consensus 61 Sqps~~~~~~~f~---~~~~ii~i~iSs~LSGTy~sA~~aa~~~~ee~~~~~I~ViDS------------~~~s~g~g~~ 125 (278)
T 3fdj_A 61 ACPGIDAWLEAFG---DDDEIFVVTITAGMSGTYNSAMAARAVYLEEHPQAKVRVIDS------------KSTGPQMRII 125 (278)
T ss_dssp ECCCHHHHHHHHT---TCSEEEEEESCTTTCSHHHHHHHHHHHHHTTCTTCEEEEEEC------------SSCTHHHHHH
T ss_pred cCCCHHHHHHHHh---cCCcEEEEECCCcHhHHHHHHHHHHHHHHhhCCCCeEEEEcC------------CchhHHHHHH
Confidence 3588999888886 456677765 4567766678888888765522233333322 2233555566
Q ss_pred HHHHhHHHHcCCCHHHHHHHHHHHHhhhccceeecc--ccccCCC--------------CCCCCC-CCCeeEEeccccCC
Q 021602 90 NKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALS--VCTLPGQ--------------VTSDRL-GPGKMELGLGIHGE 152 (310)
Q Consensus 90 ~KIaGAaAe~G~sL~ev~~~a~~~~~~~~Tigvals--~c~~Pg~--------------~~~f~L-~~~emEiGmGIHGE 152 (310)
..-|-.++++|.|++|+.+..++..+++++.=+-=+ .=.-=|+ +|-.++ .+|+++
T Consensus 126 v~~A~~~~~~G~s~~eI~~~l~~~~~~~~~~f~v~~L~~L~kGGRis~~~a~ig~lL~IKPIl~~~~~G~l~-------- 197 (278)
T 3fdj_A 126 LEQLQQMIEEGKKFEEIDGAIDAYMQKTRLFCSLKSLHNLAQNGRVSKVVASAAEVLGISVIGTASSHGTLE-------- 197 (278)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHTTEEEEEEESCCHHHHHTTSSCHHHHHGGGSTTEEEEEEECTTSSEE--------
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhcceEEEEECChHHHHHCCcchHHHHHHHHhhCcEEEEEEccCCeEE--------
Confidence 666778999999999999999999988876533111 0000011 122222 233332
Q ss_pred CCcccccCCCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcC-CeEEEeeeec
Q 021602 153 PGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHG-LAVERVYTGS 231 (310)
Q Consensus 153 pG~~r~~~~sa~elv~~ml~~ll~~~r~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~g-i~v~r~~vG~ 231 (310)
...+..+-+..++.|++.+.+. .. ...++. +.+. .. . |. +.++.+.|+++++ .++.-..+|.
T Consensus 198 ---~~~KvRg~kka~~~l~~~~~~~-----~~-~~~~v~-i~h~--~~-~-e~---a~~l~~~l~~~~~~~~i~i~~~g~ 260 (278)
T 3fdj_A 198 ---AIGKCRGDKKLLVKLQALLDDA-----GY-EGGKLR-ICHV--EN-E-AL---ADKIADMIKQAYGTTDVCVYKAGG 260 (278)
T ss_dssp ---EEEEEESHHHHHHHHHHHHHHH-----TC-CSCCEE-EEES--SC-H-HH---HHHHHHHHHHHHCCCCEEEEECCH
T ss_pred ---EeeeecCHHHHHHHHHHHHHHh-----CC-CCcEEE-EEec--CC-H-HH---HHHHHHHHHHhCCCCcEEEEEeCc
Confidence 2344555566778888877653 11 233443 3332 22 2 32 3445555666554 3455555666
Q ss_pred ccc-ccCCCcceEEEe
Q 021602 232 FMT-SLDMAGFSISIM 246 (310)
Q Consensus 232 ~~T-Sldm~GfSiTLl 246 (310)
.++ =.+-.|+.|...
T Consensus 261 vi~~h~G~gal~i~~~ 276 (278)
T 3fdj_A 261 LCSYYAERGGIILSCE 276 (278)
T ss_dssp HHHHHHCTTCEEEEEE
T ss_pred EEEEEECCCeEEEEEE
Confidence 554 455566666543
No 7
>3jr7_A Uncharacterized EGV family protein COG1307; structural genomics, PSI2, MCSG, protein struct initiative; HET: PG6; 2.00A {Ruminococcus gnavus}
Probab=87.12 E-value=2.2 Score=39.69 Aligned_cols=196 Identities=14% Similarity=0.169 Sum_probs=109.0
Q ss_pred CCCCHHHHHHHHHhccCCCceEEEe--eccccccccHHHHHHHHHhc--CCcEEEEEecccccCCCCCCCCCcccccchh
Q 021602 12 ASPPVDSILAGIHAVTGPMGCLLIV--TNYTGDRLNFGLAAEQAKSE--GYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (310)
Q Consensus 12 aSPs~~qIl~ai~~v~~~~GvL~iv--~NYtGD~LNFgmA~E~A~~~--Gi~v~~ViV~DDvA~~~~~~~~gRRGlAGtv 87 (310)
+.||+.++.++.+. ....||+|- ..-+|=.=+.-+|+++...+ +.+|. +| |- |..-.|.=
T Consensus 81 Sqps~~~~~~~f~~--~~~~Ii~i~iSs~LSGTy~sA~~Aa~~~~e~~~~~~I~--Vi-DS-----------~~~s~g~g 144 (298)
T 3jr7_A 81 SCPSPERYMESYHC--DAERIYVVTLSAELSGSYNSAVLGKNLYEEEYGEKQIH--VF-NS-----------RSASVGET 144 (298)
T ss_dssp ECCCHHHHHHHHCS--SCSEEEEEESCTTTCSHHHHHHHHHHHHHHHHCCCEEE--EE-EC-----------SSCTHHHH
T ss_pred CCCCHHHHHHHHHh--cCCeEEEEECCcchhHHHHHHHHHHHHHHhhCCCCeEE--EE-CC-----------CchhHHHH
Confidence 35899999999885 556777765 45677666777888877654 33433 33 31 22334555
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccceee--ccccccCCC-CCCCCCCCCeeEEeccc-cCCCCc--ccccCC
Q 021602 88 LVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVA--LSVCTLPGQ-VTSDRLGPGKMELGLGI-HGEPGA--AVADLQ 161 (310)
Q Consensus 88 lv~KIaGAaAe~G~sL~ev~~~a~~~~~~~~Tigva--ls~c~~Pg~-~~~f~L~~~emEiGmGI-HGEpG~--~r~~~~ 161 (310)
++..-|-.++++|.|++||.+..++..+++++.=+- |..=.-=|+ .....+--+-+-|=-=+ +.+-|. ...|..
T Consensus 145 ~lv~~Aa~l~~~G~s~eeI~~~l~~~~~~~~~~f~v~~L~~L~kGGRis~~~a~ig~lL~IKPIl~~~~~G~l~~~~KvR 224 (298)
T 3jr7_A 145 LIALKVQQCEKAGMTFEEVVESVECYIEEQHTYFVLENLDTLRKNGRLTGIKSLVAGALNIKPIMGSTPQGTICQKEKAR 224 (298)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCEEEECSCCHHHHHTTCSTTCCC--CCCTTEEEEEEECTTSCEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhhCeEEEEeCChHHHHhCCeehHHHHHHHhhcCcEEEEEEccCCeEEEeeecC
Confidence 666667789999999999999999999988876431 111111011 00000001111121222 233442 235566
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCC-eEEEeeeeccccc
Q 021602 162 PVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGL-AVERVYTGSFMTS 235 (310)
Q Consensus 162 sa~elv~~ml~~ll~~~r~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi-~v~r~~vG~~~TS 235 (310)
+-+..++.|++.+.++ .. ......+.+.+. +. . |. +.++.+.|+++++. ++.-..+|..+.+
T Consensus 225 g~kka~~~l~~~~~~~----~~-~~~~~~v~I~h~-~~--~-e~---a~~l~~~l~~~~~~~~i~i~~~g~vig~ 287 (298)
T 3jr7_A 225 GMKKALVKMADCVAAD----VV-NAGDKILAIAHC-NC--E-ER---AKEVQRLLKERFAVKSSFIVDTSGISTV 287 (298)
T ss_dssp SHHHHHHHHHHHHHHH----CC-SGGGCEEEEEES-SC--H-HH---HHHHHHHHHHHCCCSEEEEEECCHHHHH
T ss_pred CHHHHHHHHHHHHHHH----hc-cCCCcEEEEEeC-CC--H-HH---HHHHHHHHHhhcCCCcEEEEEEccEEEE
Confidence 6677788888888664 22 112233334442 22 2 32 34556666777654 4555566665554
No 8
>3pl5_A SMU_165, putative uncharacterized protein; fatty acid binding protein, lipid binding protein; HET: PLM; 2.04A {Streptococcus mutans}
Probab=86.51 E-value=2.4 Score=40.04 Aligned_cols=183 Identities=17% Similarity=0.139 Sum_probs=108.4
Q ss_pred CCCHHHHHHHHHhc-cCCCceEEEe--eccccccccHHHHHHHHHhc--CCcEEEEEecccccCCCCCCCCCcccccchh
Q 021602 13 SPPVDSILAGIHAV-TGPMGCLLIV--TNYTGDRLNFGLAAEQAKSE--GYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (310)
Q Consensus 13 SPs~~qIl~ai~~v-~~~~GvL~iv--~NYtGD~LNFgmA~E~A~~~--Gi~v~~ViV~DDvA~~~~~~~~gRRGlAGtv 87 (310)
.||+.++.++.+.. ..+..||+|- ..-+|=.=+.-+|+++...+ +.+|.. | |- +..-.|.-
T Consensus 98 qPs~~~~~~~f~~l~~~g~~Ii~I~iSS~LSGTy~sA~~Aa~~~~e~~~~~~I~V--i-DS-----------~~~s~g~g 163 (320)
T 3pl5_A 98 QVNVGQFESYFRQSAENGQEVLYIAFSSVLSGTYQSAVMARDIVLEEYPQASIEI--V-DT-----------LAATGGEG 163 (320)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEECCTTTCTHHHHHHHHHHHHHHHCTTCCEEE--E-EC-----------CCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCeEEEEecCchHhHHHHHHHHHHHHHHhhCCCCeEEE--E-cC-----------CchHHHHH
Confidence 58999999998765 3456788775 45677777788888887654 444433 2 31 22335555
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccceeecc--cc----ccCC----------CCCCCCCC-CCeeEEecccc
Q 021602 88 LVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALS--VC----TLPG----------QVTSDRLG-PGKMELGLGIH 150 (310)
Q Consensus 88 lv~KIaGAaAe~G~sL~ev~~~a~~~~~~~~Tigvals--~c----~~Pg----------~~~~f~L~-~~emEiGmGIH 150 (310)
++..-|-.++++|+|++||++..++..+++++.=+-=+ .= -++. =+|-..+. +|+++
T Consensus 164 ~lv~~Aa~l~~~G~s~eeI~~~le~~~~~~~~~f~v~~L~yL~kGGRIs~~~a~iG~lL~IKPIl~~~~dG~l~------ 237 (320)
T 3pl5_A 164 YLAMLAAQAREEGKSLKETKELILDVGPRLRTFFLVDNLYHLMRGGRLSKTSAIVGSLVNIKPLLWLDASGKLV------ 237 (320)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHGGGEEEEEECSCSHHHHHHTCCC--------CTTEEEEEEECTTSCEE------
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECChHHHHhCCCccHHHHHHHhhhCceEEEEEccCCeEE------
Confidence 66666678999999999999999999988876533110 00 0000 01112222 23322
Q ss_pred CCCCcccccCCCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCC-eEEEeee
Q 021602 151 GEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGL-AVERVYT 229 (310)
Q Consensus 151 GEpG~~r~~~~sa~elv~~ml~~ll~~~r~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi-~v~r~~v 229 (310)
...|..+-+..++.|++.+.+. .. ..+ +.+... + . .|. +.++.+.|+++++. ++.-..+
T Consensus 238 -----~~~KvRg~kka~~~lv~~~~~~----~~---~~~-v~I~h~-~-~--~e~---a~~l~~~l~~~~~~~~i~i~~i 297 (320)
T 3pl5_A 238 -----PIAKLRGRKKGMKEMLKRATAD----VA---HDT-AVVAYA-N-D--SEA---AENLKEQLLANEKIKNVVTLPL 297 (320)
T ss_dssp -----EEEEEESHHHHHHHHHHHHTSS----CC---SSE-EEEEES-S-C--HHH---HHHHHHHHHTSTTCCEEEEEEC
T ss_pred -----EEeeecCHHHHHHHHHHHHHHh----cC---CCE-EEEEeC-C-C--HHH---HHHHHHHHHhhcCCCcEEEEEe
Confidence 2355566677888899888653 22 233 444442 2 2 233 35666777777664 4444555
Q ss_pred eccccc
Q 021602 230 GSFMTS 235 (310)
Q Consensus 230 G~~~TS 235 (310)
|.-+.+
T Consensus 298 g~vIg~ 303 (320)
T 3pl5_A 298 GPVIST 303 (320)
T ss_dssp CHHHHH
T ss_pred ccEEEE
Confidence 655543
No 9
>1pzx_A Hypothetical protein APC36103; structural genomics, two domains containing mixed alpha/beta structures, PSI; HET: PLM; 2.00A {Geobacillus stearothermophilus} SCOP: c.119.1.1
Probab=78.24 E-value=8.1 Score=35.50 Aligned_cols=97 Identities=12% Similarity=0.074 Sum_probs=66.1
Q ss_pred CCCCHHHHHHHHHhc-cCCCceEEEee--ccccccccHHHHHHHHHh--cCCcEEEEEecccccCCCCCCCCCcccccch
Q 021602 12 ASPPVDSILAGIHAV-TGPMGCLLIVT--NYTGDRLNFGLAAEQAKS--EGYKVEIVIVGDDCALPPPRGIAGRRGLAGT 86 (310)
Q Consensus 12 aSPs~~qIl~ai~~v-~~~~GvL~iv~--NYtGD~LNFgmA~E~A~~--~Gi~v~~ViV~DDvA~~~~~~~~gRRGlAGt 86 (310)
+.||+.++.++.+.. ..+..||+|-- .-+|=.=+.-+|+++..+ .+.+|. +| | -|..-.|.
T Consensus 63 Sqps~~~~~~~f~~l~~~g~~ii~i~iSs~LSGTy~sA~~aa~~~~ee~~~~~I~--Vi-D-----------S~~~s~g~ 128 (289)
T 1pzx_A 63 AQPSPLAMKELFLPYAKENRPCLYIAFSSKLSGTYQTAMAVRSELLDEYPEFRLT--II-D-----------SKCASLGQ 128 (289)
T ss_dssp ECCCHHHHHHHHHHHHHTTCCEEEEECCTTTCSHHHHHHHHHHHHHHHSTTCCEE--EE-E-----------CCCCHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEECCCchhHHHHHHHHHHHhhHhhCCCCeEE--EE-c-----------CchhhHHH
Confidence 458999999999765 44567777653 345555566677776543 244433 22 3 12334555
Q ss_pred hhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccee
Q 021602 87 ILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGV 122 (310)
Q Consensus 87 vlv~KIaGAaAe~G~sL~ev~~~a~~~~~~~~Tigv 122 (310)
-++..-|-.++++|+|++||.+..++..+++++.=+
T Consensus 129 g~~v~~A~~l~~~G~s~eeI~~~l~~~~~~~~~~f~ 164 (289)
T 1pzx_A 129 GLAVMKAVELAKQNTPYNLLCETIESYCRHMEHIFT 164 (289)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCEEEEE
Confidence 666667778899999999999999999998887644
No 10
>2dt8_A DEGV family protein; fatty acid binding, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: PLM; 1.48A {Thermus thermophilus}
Probab=76.99 E-value=8.2 Score=35.32 Aligned_cols=93 Identities=20% Similarity=0.087 Sum_probs=58.5
Q ss_pred CCCCHHHHHHHHHhcc-CCCceEEEee--ccccccccHHHHHHHHHhc-CCcEEEEEecccccCCCCCCCCCcccccchh
Q 021602 12 ASPPVDSILAGIHAVT-GPMGCLLIVT--NYTGDRLNFGLAAEQAKSE-GYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (310)
Q Consensus 12 aSPs~~qIl~ai~~v~-~~~GvL~iv~--NYtGD~LNFgmA~E~A~~~-Gi~v~~ViV~DDvA~~~~~~~~gRRGlAGtv 87 (310)
+.||+.++.++.+... .+..||+|-- .-+|= |.-| .+|+.+ ..+| .|=| -|..-.|.-
T Consensus 62 Sqps~~~~~~~f~~l~~~~~~ii~i~lSs~LSGT---y~sA-~~aa~~~~~~I---~ViD-----------S~~~s~g~g 123 (280)
T 2dt8_A 62 SQPSPEDFARVYREALEEADHVLSLHISGKLSGT---VQSA-ELAAQEFPGRV---TVVD-----------TQAASLGVG 123 (280)
T ss_dssp ECCCHHHHHHHHHHHTTSCSEEEEEESCTTTCTH---HHHH-HHHHTTSTTSE---EEEE-----------CSCCTHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEECCCcHhHH---HHHH-HHHHHhCCCCE---EEEC-----------CchhHHHHH
Confidence 3589999999997763 4456766642 22332 3333 333322 2122 2222 123335556
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccee
Q 021602 88 LVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGV 122 (310)
Q Consensus 88 lv~KIaGAaAe~G~sL~ev~~~a~~~~~~~~Tigv 122 (310)
++..-|-.++++|+|++||.+..++..+++++.=+
T Consensus 124 ~~v~~a~~l~~~G~s~eei~~~l~~~~~~~~~~f~ 158 (280)
T 2dt8_A 124 MMVLRAKELLEEGQSLEAVLAELERLRRDHFVRFS 158 (280)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHSCEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhhcEEEEE
Confidence 66667778899999999999999999998876543
No 11
>2bz1_A GTP cyclohydrolase II; riboflavin biosynthesis, catalytic zinc, magnesium; 1.54A {Escherichia coli} SCOP: c.144.1.1 PDB: 2bz0_A
Probab=72.96 E-value=1.8 Score=38.42 Aligned_cols=56 Identities=23% Similarity=0.237 Sum_probs=42.1
Q ss_pred eeecCCccCCC---CHHHHHHHHHhcc-CCCceEEEeecc-------------------------------ccccccHHH
Q 021602 4 AAICGDVFASP---PVDSILAGIHAVT-GPMGCLLIVTNY-------------------------------TGDRLNFGL 48 (310)
Q Consensus 4 Aav~G~VFaSP---s~~qIl~ai~~v~-~~~GvL~iv~NY-------------------------------tGD~LNFgm 48 (310)
.+..||||-|. .-.|+-+|++.+. .+.|||+..-.= ..|-=+||+
T Consensus 53 ec~tgDvfgs~rcdcg~qL~~Al~~I~~~G~GVlvyLrqegrgigL~~kl~ay~lqd~g~dt~~an~~lg~~~d~R~ygi 132 (196)
T 2bz1_A 53 ECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTL 132 (196)
T ss_dssp CCHHHHTSCCSSCSHHHHHHHHHHHHHHHTSEEEEEECCHHHHTCHHHHHHHHHHHHTTCCHHHHHHHTTCCSCCCCTHH
T ss_pred cCChHHHhCCCCCCChHHHHHHHHHHHHhCCEEEEEECCCCcchhHHHHHHHHhhhccCCcccccccccCCCCccccHHH
Confidence 46789999997 4568999999887 477999887421 125567888
Q ss_pred HHHHHHhcCCc
Q 021602 49 AAEQAKSEGYK 59 (310)
Q Consensus 49 A~E~A~~~Gi~ 59 (310)
+++..+.-|++
T Consensus 133 gAqIL~dLGV~ 143 (196)
T 2bz1_A 133 CADMFKLLGVN 143 (196)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHcCCC
Confidence 88888887775
No 12
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=71.84 E-value=21 Score=29.05 Aligned_cols=77 Identities=17% Similarity=0.223 Sum_probs=48.1
Q ss_pred HHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCcccccchhhHHHHHhHH
Q 021602 17 DSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAA 96 (310)
Q Consensus 17 ~qIl~ai~~v~~~~GvL~iv~NYtGD~LNFgmA~E~A~~~Gi~v~~ViV~DDvA~~~~~~~~gRRGlAGtvlv~KIaGAa 96 (310)
+++.++|+.++.++|||+++== |=-.||. ....+..+.++++| +=+.. -++.+++ -.
T Consensus 49 ~~i~~~i~~~d~~~GVLiL~Dm--GSp~n~a--~~l~~~~~~~v~vI---~gvnl---------------pmllea~-~~ 105 (130)
T 3gx1_A 49 EKLKQTVVKLNPVKGVLILSDM--GSLTSFG--NILTEELGIRTKTV---TMVST---------------PVVLEAM-RK 105 (130)
T ss_dssp HHHHHHHHTSCCTTCEEEEECS--GGGGTHH--HHHHHHHCCCEEEE---CSCCH---------------HHHHHHH-HH
T ss_pred HHHHHHHHhhCCCCCEEEEEeC--CCHHHHH--HHHHHhcCCCEEEE---eCCCH---------------HHHHHHH-HH
Confidence 5566678888999999999932 6666653 33333336677654 12222 3444543 23
Q ss_pred HHcCCCHHHHHHHHHHHHhh
Q 021602 97 AAAGLSLADVAAEAKRASEM 116 (310)
Q Consensus 97 Ae~G~sL~ev~~~a~~~~~~ 116 (310)
+..+.+|+|+++.++..-++
T Consensus 106 ~~~~~~l~el~~~~~~~~~~ 125 (130)
T 3gx1_A 106 ASLGRGLEDIYQSCEQLFEN 125 (130)
T ss_dssp HHTTCCHHHHHHHHHHHHHH
T ss_pred hhcCCCHHHHHHHHHHHHHH
Confidence 45566999999888776554
No 13
>3ct6_A PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DHAM; mixed alpha beta structure, glycerol metabolism; 1.10A {Lactococcus lactis} SCOP: c.54.1.2 PDB: 3cr3_C*
Probab=71.32 E-value=6.9 Score=32.16 Aligned_cols=79 Identities=16% Similarity=0.245 Sum_probs=52.1
Q ss_pred CHHHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCcccccchhhHHHHHh
Q 021602 15 PVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAG 94 (310)
Q Consensus 15 s~~qIl~ai~~v~~~~GvL~iv~NYtGD~LNFgmA~E~A~~~Gi~v~~ViV~DDvA~~~~~~~~gRRGlAGtvlv~KIaG 94 (310)
..++|.++|+.++ +.|||+++== -|=.+|-.++.++.+ -+|+.+ ..| +|....-
T Consensus 45 ~~~~i~~ai~~~~-~dgVlvltDL-Ggsp~N~~~al~~~~---~~v~vi------NlP---------------mvega~~ 98 (131)
T 3ct6_A 45 SFDRVMNAIEENE-ADNLLTFFDL-GSARMNLDLVSEMTD---KELTIF------NVP---------------LIEGAYT 98 (131)
T ss_dssp CHHHHHHHHHHSS-CSEEEEEESS-GGGHHHHHHHHHTCS---SEEEEC------CSC---------------HHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCEEEEEeC-CCChHHHHHHHHhcC---CCEEEE------Ehh---------------HHHHHHH
Confidence 4789999999988 6899988744 666677777766432 255554 222 3433333
Q ss_pred H--HHHcCCCHHHHHHHHHHHHhhhcc
Q 021602 95 A--AAAAGLSLADVAAEAKRASEMVGT 119 (310)
Q Consensus 95 A--aAe~G~sL~ev~~~a~~~~~~~~T 119 (310)
| .+..|.+++|+.+-+.....+-||
T Consensus 99 aa~~~~~~~~l~el~~~~~~~~~~~~~ 125 (131)
T 3ct6_A 99 ASALLEAGATFEAIKEQLEKMLIEKRS 125 (131)
T ss_dssp HHHHHHTTCCHHHHHHHHGGGCCCCCC
T ss_pred HHHHhhcCCCHHHHHHHHHHHHhCccc
Confidence 2 346799999998888776555443
No 14
>3egl_A DEGV family protein; alpha-beta-alpha sandwich, methylated lysines, structural GE PSI-2, protein structure initiative; HET: MLY MSE PLM; 2.41A {Corynebacterium glutamicum}
Probab=68.58 E-value=6.1 Score=36.28 Aligned_cols=197 Identities=15% Similarity=0.002 Sum_probs=108.2
Q ss_pred CCCHHHHHHHHHh-ccC--CCceEEEe--eccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCcccccchh
Q 021602 13 SPPVDSILAGIHA-VTG--PMGCLLIV--TNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (310)
Q Consensus 13 SPs~~qIl~ai~~-v~~--~~GvL~iv--~NYtGD~LNFgmA~E~A~~~Gi~v~~ViV~DDvA~~~~~~~~gRRGlAGtv 87 (310)
.||+.++.+..+. ... ...||+|- ..-+|=.=+.-+|+++.. +.+ |.|=| -|..-.|.-
T Consensus 44 qps~~~~~~~f~~~~~~~~~d~Ii~I~iSs~LSGTy~sA~~aa~~~~--~~~---I~ViD-----------S~~~s~g~g 107 (277)
T 3egl_A 44 GLSSLELAASYARQLERGGDDGVLALHISXELSSTWSAAVTAAAVFD--DDS---VRVVD-----------TSSLGMAVG 107 (277)
T ss_dssp CCCHHHHHHHHHHHHHHTTTSCEEEECSCTTTCSHHHHHHHHHTTSS--TTS---EEEEC-----------CSCCTHHHH
T ss_pred CcCHHHHHHHHHHHHHhCCCCcEEEEEeCcchhhhhHHHHHHHHhCC--CCC---EEEEC-----------CCchhHHHH
Confidence 3999999999854 332 35688775 345554434444443321 223 22223 133345666
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccceee--ccccccCCC--------------CCCCCCCCCeeEEeccccC
Q 021602 88 LVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVA--LSVCTLPGQ--------------VTSDRLGPGKMELGLGIHG 151 (310)
Q Consensus 88 lv~KIaGAaAe~G~sL~ev~~~a~~~~~~~~Tigva--ls~c~~Pg~--------------~~~f~L~~~emEiGmGIHG 151 (310)
++..-|-.++++|+|++|+.+..++..+++++.=+- |..=.-=|+ +|-.++.+|+++
T Consensus 108 ~~v~~Aa~l~~~G~s~eeI~~~l~~~~~~~~~~f~v~~L~~L~kGGRis~~~a~ig~lL~IKPIl~~~dG~l~------- 180 (277)
T 3egl_A 108 AAAMAAARMAXDGASLQECYDIAVDTLXRSETWIYLHRIDEIWXSGRISTATAMVSTALATRPIMRFNGGRME------- 180 (277)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHTEEEEEECSCSHHHHHTTCSCTTTCSSGGGGCSSCEEEEETTEEE-------
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhhceEEEEcCCHHHHhhCCccchHHHHHhhccceEEEEEEeCCEEE-------
Confidence 667777789999999999999999999888765331 110000011 122222233322
Q ss_pred CCCcccccCCCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCC--eEEEeee
Q 021602 152 EPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGL--AVERVYT 229 (310)
Q Consensus 152 EpG~~r~~~~sa~elv~~ml~~ll~~~r~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi--~v~r~~v 229 (310)
...|..+.+...+.|++.+.+. . ..++..+.+.+. +. .|. +.++.+.|+++++. ++.-..+
T Consensus 181 ----~~~KvRg~kka~~~l~~~~~~~----~--~~~~~~i~i~h~-~~---~e~---a~~l~~~l~~~~~~~~~i~i~~i 243 (277)
T 3egl_A 181 ----IAAXTRTQSXAFAXLVELAQIR----A--DGEPVFIAIGQN-EA---REA---AXQLEELLRNALPEGSSFMSVDI 243 (277)
T ss_dssp ----EEECCCSHHHHHHHHHHHHHHH----H--TTSCCEEEEEEE-SC---HHH---HHHHHHHHHHHSCTTCEEEEEEC
T ss_pred ----EEEecCChhHHHHHHHHHHHHH----h--CCCCEEEEEEeC-CC---HHH---HHHHHHHHHHhcCCCceEEEEEE
Confidence 2356666677778888887653 2 122323333332 22 222 34556666666553 5666667
Q ss_pred ecccccc-CCCcceEEEeccc
Q 021602 230 GSFMTSL-DMAGFSISIMKAD 249 (310)
Q Consensus 230 G~~~TSl-dm~GfSiTLl~ld 249 (310)
|.-+.+= +-..+.|..++-+
T Consensus 244 g~vIg~H~Gpg~igi~~~~~~ 264 (277)
T 3egl_A 244 DPTLAVHSGPGAVSVSAVFAN 264 (277)
T ss_dssp CHHHHHHHCTTEEEEEEECSS
T ss_pred ccEEEEEeCCCeEEEEEEECC
Confidence 7666543 3444667666543
No 15
>3b48_A Uncharacterized protein; enterococcus faecalis V583, structural genomics, PSI-2, PROT structure initiative; 2.21A {Enterococcus faecalis} SCOP: c.54.1.2
Probab=66.34 E-value=11 Score=30.75 Aligned_cols=77 Identities=21% Similarity=0.214 Sum_probs=51.2
Q ss_pred CHHHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhc-CCcEEEEEecccccCCCCCCCCCcccccchhhHHHHH
Q 021602 15 PVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSE-GYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIA 93 (310)
Q Consensus 15 s~~qIl~ai~~v~~~~GvL~iv~NYtGD~LNFgmA~E~A~~~-Gi~v~~ViV~DDvA~~~~~~~~gRRGlAGtvlv~KIa 93 (310)
..++|.++|+.++.+.|||+++== -|=.+|-.+|.+....+ .-+|+.+ ..| +|.+..
T Consensus 50 ~~~~i~~ai~~~~~~dgVlvltDL-Ggsp~N~~~~~~~~~~~~~~~v~vv------NlP---------------mv~~~l 107 (135)
T 3b48_A 50 DPMKIIDTINEADSDREFLIFADL-GSAVLSSELAFDMLEEDQQKHYHLV------DAP---------------LVEGAF 107 (135)
T ss_dssp CHHHHHHHHHHSCSSCEEEEEECS-HHHHHHHHHHHHHSCHHHHTTEEEC------CSC---------------HHHHHH
T ss_pred HHHHHHHHHHhcCCCCCEEEEEeC-CCChhHHHHHHHHhcccccCCEEEE------EHH---------------HHHHHH
Confidence 478999999999999999998833 55556766777765432 1256553 221 555554
Q ss_pred hH--HHHcCCCHHHHHHHHHHH
Q 021602 94 GA--AAAAGLSLADVAAEAKRA 113 (310)
Q Consensus 94 GA--aAe~G~sL~ev~~~a~~~ 113 (310)
-| .+..|.+++|+.+.+...
T Consensus 108 ~aa~~~~~~~~l~el~~~a~~~ 129 (135)
T 3b48_A 108 ASAITAGVSDDLTQILAEAQNA 129 (135)
T ss_dssp HHHHHHC-CCCHHHHHHHHHTC
T ss_pred HHHHHhhcCCCHHHHHHHHHHH
Confidence 43 245699999998877653
No 16
>3lup_A DEGV family protein; PSI-2, MCSG, structural genomics, fatty acid binding, protei structure initiative; HET: ELA; 2.65A {Streptococcus agalactiae} SCOP: c.119.1.0
Probab=63.00 E-value=12 Score=34.45 Aligned_cols=195 Identities=12% Similarity=0.080 Sum_probs=104.1
Q ss_pred CCCCHHHHHHHHHhccC-C-CceEEEe--eccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCcccccchh
Q 021602 12 ASPPVDSILAGIHAVTG-P-MGCLLIV--TNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (310)
Q Consensus 12 aSPs~~qIl~ai~~v~~-~-~GvL~iv--~NYtGD~LNFgmA~E~A~~~Gi~v~~ViV~DDvA~~~~~~~~gRRGlAGtv 87 (310)
+.||+.++.++.+.... + ..||+|- ..-+|=.=+.-+|+|+. .+.+ |.|=| -|..-.|.-
T Consensus 65 Sqps~~~~~~~f~~l~~~g~d~ii~i~iSs~LSGTy~sA~~a~~~~--~~~~---I~ViD-----------S~~~s~g~g 128 (285)
T 3lup_A 65 SQPSLAELDDLLCQLEKEGYTHVLGLFIAAGISGFWQNIQFLIEEH--PNLT---IAFPD-----------TKITSAPQG 128 (285)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCEEEECCSCGGGCTHHHHHTTHHHHC--TTSE---EECCC-----------CCCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEEeCCCchhHHHHHHHHHHHhC--CCCC---EEEEc-----------CCchHHHHH
Confidence 45899999999977643 3 4577654 34455433333343321 2322 22222 234445666
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccceeecc--cc--------------ccCCCCCCCCCC-CCeeEEecccc
Q 021602 88 LVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALS--VC--------------TLPGQVTSDRLG-PGKMELGLGIH 150 (310)
Q Consensus 88 lv~KIaGAaAe~G~sL~ev~~~a~~~~~~~~Tigvals--~c--------------~~Pg~~~~f~L~-~~emEiGmGIH 150 (310)
++..-|-.++++|+|++|+.+..++..+++++.=+-=+ .= ++=.=+|-.++. +|+++
T Consensus 129 ~~v~~A~~l~~~G~s~eeI~~~l~~~~~~~~~~f~v~~L~~L~kGGRis~~~a~ig~lL~IKPIl~~~~~G~l~------ 202 (285)
T 3lup_A 129 NLVRNALMCSREGMDFDVIVNKIQSQIEKIEGFIVVNDLNHLVKGGRLSNGSAIIGNLLSIKPVLHFNEEGKIV------ 202 (285)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHTTCEEEEECSCTHHHHHHTCBTTHHHHHHHHTTSCCEEEECTTSCEE------
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhhcEEEEEECChHHHhhCCCccHHHHHHHHhhCcEEEEEEccCceEE------
Confidence 66777778999999999999999999988776533100 00 000112333443 44444
Q ss_pred CCCCcccccCCCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcC-CeEEEeee
Q 021602 151 GEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHG-LAVERVYT 229 (310)
Q Consensus 151 GEpG~~r~~~~sa~elv~~ml~~ll~~~r~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~g-i~v~r~~v 229 (310)
-..|..+-+...+.|++.+.+. .. . ++..+.+... + .+ |. +.++.+.|++++. .++....+
T Consensus 203 -----~~~KvRg~kka~~~l~~~~~~~----~~-~-~~~~v~i~h~-~-~~--e~---a~~l~~~l~~~~~~~~i~i~~i 264 (285)
T 3lup_A 203 -----VYEKVRTEKKALKRLAEIVKEM----TA-D-GEYDIAIIHS-R-AQ--DK---AEQLYNLLAKAGLKDDLEIVSF 264 (285)
T ss_dssp -----EEECCSSHHHHHHHHHHHHHHH----GG-G-SCEEEEEEES-S-CH--HH---HHHHHHHHHHTTCGGGEEEEEC
T ss_pred -----EeeecCCHHHHHHHHHHHHHHh----hc-C-CCcEEEEEeC-C-CH--HH---HHHHHHHHHhhCCCCeEEEEEE
Confidence 2345566667778888777653 22 1 2222334432 2 22 32 2345555555543 24555566
Q ss_pred eccccccCCCc-ceEEEe
Q 021602 230 GSFMTSLDMAG-FSISIM 246 (310)
Q Consensus 230 G~~~TSldm~G-fSiTLl 246 (310)
|.-+.+-=.+| +.|..+
T Consensus 265 g~vig~H~Gpg~igi~~~ 282 (285)
T 3lup_A 265 GGVIATHLGEGAVAFGIT 282 (285)
T ss_dssp CHHHHHHHCTTCEEEEEE
T ss_pred CcEEEEEecCCeEEEEEE
Confidence 66554433333 444443
No 17
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=58.09 E-value=48 Score=30.90 Aligned_cols=185 Identities=12% Similarity=0.078 Sum_probs=98.5
Q ss_pred CCCCHHHHHHHHHhcc-CCCceEEEe--eccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCcccccchhh
Q 021602 12 ASPPVDSILAGIHAVT-GPMGCLLIV--TNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTIL 88 (310)
Q Consensus 12 aSPs~~qIl~ai~~v~-~~~GvL~iv--~NYtGD~LNFgmA~E~A~~~Gi~v~~ViV~DDvA~~~~~~~~gRRGlAGtvl 88 (310)
+.||+.++.++.+... ....||+|- ..-+|=.=+.-+|+++. .+.+ + .|=| -|..-.|.-+
T Consensus 96 SqPs~~~~~~~fe~l~~~~~~Ii~I~iSS~LSGTy~sA~~Aa~~~--~~~~--I-~ViD-----------S~~~s~g~g~ 159 (315)
T 3fys_A 96 SQPPIGELVALYEELGKSYDAVISIHLSSGISGTFSSAAAADSMV--DNID--V-YPFD-----------SEISCLAQGF 159 (315)
T ss_dssp ECCCHHHHHHHHHHHTTTCSEEEEEESCTTTCSHHHHHHHGGGGC--SSCE--E-EEEE-----------CSSCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEeCCCcHhHHHHHHHHHHHhC--CCCC--E-EEEC-----------CchhHHHHHH
Confidence 4589999999997754 456677765 33444333333333221 2322 2 2222 1333455556
Q ss_pred HHHHHhHHHHcCC-CHHHHHHHHHHHHhhhccceeecc--c--------------cccCCCCCCCCCCCCeeEEeccccC
Q 021602 89 VNKIAGAAAAAGL-SLADVAAEAKRASEMVGTMGVALS--V--------------CTLPGQVTSDRLGPGKMELGLGIHG 151 (310)
Q Consensus 89 v~KIaGAaAe~G~-sL~ev~~~a~~~~~~~~Tigvals--~--------------c~~Pg~~~~f~L~~~emEiGmGIHG 151 (310)
+..-|-.++++|. |++||++..++..+++++.=+-=+ . .++=.=+|-.++.+|+++.
T Consensus 160 lv~~Aa~l~~~G~~s~eeI~~~l~~~~~~~~~~f~v~~L~yL~kGGRIs~~~a~ig~lL~IKPIl~~~dG~l~~------ 233 (315)
T 3fys_A 160 YALKAAELIKNGASSPEDIIKELEEMKKTVRAYFMVDDLAHLQRGGRLSSAQAFIGSLLKVKPILHFDNKVIVP------ 233 (315)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHTTTCEEEEECSCTHHHHHHTTTHHHHHHHSSCCCSCEEEEEETTEEEE------
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHhccEEEEEECchHHHHhCCcchHHHHHHHhhcCcEEEEEEECCEEEE------
Confidence 6667778999999 999999999999887776533100 0 0000012233333333322
Q ss_pred CCCcccccCCCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCC-eEEEeeee
Q 021602 152 EPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGL-AVERVYTG 230 (310)
Q Consensus 152 EpG~~r~~~~sa~elv~~ml~~ll~~~r~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi-~v~r~~vG 230 (310)
..|..+.+...+.|++.+.+. .. ...+..+.+... + . .| .+.++.+.|+++++. ++....+|
T Consensus 234 -----~~KvRg~kka~~~l~~~~~~~----~~-~~~~~~v~I~h~-~-~--~e---~a~~l~~~l~~~~~~~~i~i~~ig 296 (315)
T 3fys_A 234 -----FEKIRTRKKAISRIYELLDED----AS-KGLPMRAAVIHA-N-R--EE---EAAKIIEELSAKYPHVEFYNSYFG 296 (315)
T ss_dssp -----EEECSCHHHHHHHHHHHHHHH----HT-TCCCEEEEEEES-S-C--HH---HHHHHHHHHHHHCTTEEEEEEECC
T ss_pred -----EeeeccHHHHHHHHHHHHHHH----hh-cCCCcEEEEEec-C-C--HH---HHHHHHHHHHHhCCCCcEEEEEEc
Confidence 355566667778888777653 11 112233334432 2 2 23 234556666666554 34444556
Q ss_pred ccccc
Q 021602 231 SFMTS 235 (310)
Q Consensus 231 ~~~TS 235 (310)
.-+.+
T Consensus 297 ~vIg~ 301 (315)
T 3fys_A 297 AVIGT 301 (315)
T ss_dssp HHHHH
T ss_pred cEEEE
Confidence 55543
No 18
>2g7z_A Conserved hypothetical protein SPY1493; long-fatty acid binding protein, lipid binding protein, PSI, structural genomics; HET: MSE HXA; 2.05A {Streptococcus pyogenes}
Probab=57.75 E-value=23 Score=32.33 Aligned_cols=94 Identities=18% Similarity=0.062 Sum_probs=61.5
Q ss_pred CCCCHHHHHHHHHhcc-CC-CceEEEee--ccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCcccccchh
Q 021602 12 ASPPVDSILAGIHAVT-GP-MGCLLIVT--NYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (310)
Q Consensus 12 aSPs~~qIl~ai~~v~-~~-~GvL~iv~--NYtGD~LNFgmA~E~A~~~Gi~v~~ViV~DDvA~~~~~~~~gRRGlAGtv 87 (310)
+.||+.++.++.+... .+ ..||+|-- .-+|=.=+.-+|++ . ++.+|. |=| -|..-.|.-
T Consensus 66 Sqps~~~~~~~f~~l~~~gy~~ii~i~iSs~LSGTy~sA~~aa~-~--~~~~I~---ViD-----------S~~~s~g~g 128 (282)
T 2g7z_A 66 SQPPVGLFAETYENLVKKGVTDIVAIHLSPALSGTIEASRQGAE-I--AEAPVT---VLD-----------SGFTDQAMK 128 (282)
T ss_dssp ECCCHHHHHHHHHHHHHTTCCEEEEEECCTTTCTHHHHHHHHHH-H--HTCCEE---EEE-----------CSSCHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCeEEEEECCCcHhHHHHHHHHHHh-C--CCCeEE---EEC-----------CCchhHHHH
Confidence 4589999999997663 34 46776642 33454444555555 3 222332 222 133345556
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccee
Q 021602 88 LVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGV 122 (310)
Q Consensus 88 lv~KIaGAaAe~G~sL~ev~~~a~~~~~~~~Tigv 122 (310)
++..-|-.++++|+|++||.+..++..+++++.=+
T Consensus 129 ~~v~~A~~l~~~G~s~~eI~~~l~~~~~~~~~~f~ 163 (282)
T 2g7z_A 129 FQVVEAAKMAKAGASLNEILAAVQAIKSKTELYIG 163 (282)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhhcEEEEE
Confidence 66667778899999999999999999998876643
No 19
>1mgp_A Hypothetical protein TM841; two domain structure with mixed alpha/beta structures in BOTH domains, structural genomics; HET: PLM; 2.00A {Thermotoga maritima} SCOP: c.119.1.1 PDB: 1vpv_A*
Probab=52.81 E-value=26 Score=32.66 Aligned_cols=94 Identities=14% Similarity=0.112 Sum_probs=58.9
Q ss_pred CCCCHHHHHHHHHhcc-CC-CceEEEee--ccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCcccccchh
Q 021602 12 ASPPVDSILAGIHAVT-GP-MGCLLIVT--NYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (310)
Q Consensus 12 aSPs~~qIl~ai~~v~-~~-~GvL~iv~--NYtGD~LNFgmA~E~A~~~Gi~v~~ViV~DDvA~~~~~~~~gRRGlAGtv 87 (310)
+.||+.++.++.+... .+ ..||+|-- .-+|=.=+.-+|+++. +.+| .|=|- +..-.|.-
T Consensus 89 SqPs~~~~~e~f~~l~~~g~d~Ii~I~iSs~LSGTy~sA~~Aa~~~---~~~I---~ViDS-----------~~~s~g~g 151 (313)
T 1mgp_A 89 SQPSVEDFKKRYLKYKEEDYDVVLVLTLSSKLSGTYNSAVLASKEV---DIPV---YVVDT-----------LLASGAIP 151 (313)
T ss_dssp ECCCHHHHHHHHHHHHHTTCSEEEEEESCTTTCSHHHHHHHHHHHS---SSCE---EEEEC-----------SCCGGGTH
T ss_pred CCcCHHHHHHHHHHHHHcCCCeEEEEECCccHhHHHHHHHHHHhcC---CCeE---EEEeC-----------CcchHHHH
Confidence 4589999999997663 33 35776642 2344333344444432 2222 22231 22334555
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHh--hhcccee
Q 021602 88 LVNKIAGAAAAAGLSLADVAAEAKRASE--MVGTMGV 122 (310)
Q Consensus 88 lv~KIaGAaAe~G~sL~ev~~~a~~~~~--~~~Tigv 122 (310)
++..-|-.++++|+|++||++..++..+ ++++.=+
T Consensus 152 ~lv~~Aa~l~~~G~s~eeI~~~l~~~~~~~~~~~~f~ 188 (313)
T 1mgp_A 152 LPARVAREMLENGATIEEVLKKLDERMKNKDFKAIFY 188 (313)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHhhhCceEEEEE
Confidence 6666677889999999999999999999 8776543
No 20
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=42.92 E-value=85 Score=24.44 Aligned_cols=56 Identities=18% Similarity=0.217 Sum_probs=39.6
Q ss_pred ceeecCCccCCCCHHHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEEec
Q 021602 3 TAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVG 66 (310)
Q Consensus 3 dAav~G~VFaSPs~~qIl~ai~~v~~~~GvL~iv~NYtGD~LNFgmA~E~A~~~Gi~v~~ViV~ 66 (310)
|.+++..+ ....++++.++.+ +.|.|++......+ +.-..+.++..|.+++.+-+.
T Consensus 102 D~i~~~~~---~~~~~~l~~~~~~--~gG~l~~~~~~~~~---~~~~~~~l~~~g~~~~~~~~~ 157 (183)
T 2yxd_A 102 NKAFIGGT---KNIEKIIEILDKK--KINHIVANTIVLEN---AAKIINEFESRGYNVDAVNVF 157 (183)
T ss_dssp SEEEECSC---SCHHHHHHHHHHT--TCCEEEEEESCHHH---HHHHHHHHHHTTCEEEEEEEE
T ss_pred cEEEECCc---ccHHHHHHHHhhC--CCCEEEEEeccccc---HHHHHHHHHHcCCeEEEEEee
Confidence 55565555 6778888888887 88888888644332 445677788889888877543
No 21
>3lub_A Putative creatinine amidohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Bacteroides fragilis}
Probab=40.04 E-value=74 Score=28.61 Aligned_cols=60 Identities=12% Similarity=0.213 Sum_probs=38.5
Q ss_pred CCCCcccccCCCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhc-CCeEEE
Q 021602 151 GEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEH-GLAVER 226 (310)
Q Consensus 151 GEpG~~r~~~~sa~elv~~ml~~ll~~~r~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~-gi~v~r 226 (310)
+=||.-.....+...++..+++.|.. .|=+=+|+||+=||-. +..+++++. .++ ++.+..
T Consensus 83 ~fPGTisl~~~tl~~~l~di~~sl~~---------~G~rrlvivNgHGGN~---l~~a~~~l~----~~~~~~~v~~ 143 (254)
T 3lub_A 83 ELPFCIHTRYATQQAILEDIVSSLHV---------QGFRKLLILSGHGGNN---FKGMIRDLA----FEYPDFLIAA 143 (254)
T ss_dssp TSTTCCBCCHHHHHHHHHHHHHHHHH---------TTCCEEEEEESCTTCC---CHHHHHHHH----HHCTTCEEEE
T ss_pred CcCCeEEeCHHHHHHHHHHHHHHHHH---------cCCCEEEEEeCCchHH---HHHHHHHHH----HHCCCcEEEE
Confidence 45786555555566666666666644 3666799999999987 444555555 443 666553
No 22
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=39.26 E-value=16 Score=28.57 Aligned_cols=41 Identities=12% Similarity=0.086 Sum_probs=36.3
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeee
Q 021602 190 VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (310)
Q Consensus 190 v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG 230 (310)
..+-|..+|+.+.-+---+++++.+.|++++|+...|+|+=
T Consensus 57 a~~~v~sig~~~~~~n~~~s~~i~~~l~~~Lgi~~~riyI~ 97 (114)
T 3djh_A 57 ALCSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYIN 97 (114)
T ss_dssp EEEEEEESSCCSHHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred EEEEEEEccCCCHHHHHHHHHHHHHHHHHHhCcCcceEEEE
Confidence 56778889999987778899999999999999999999984
No 23
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=37.09 E-value=21 Score=27.61 Aligned_cols=43 Identities=14% Similarity=0.064 Sum_probs=36.7
Q ss_pred CeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeee
Q 021602 188 NRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (310)
Q Consensus 188 d~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG 230 (310)
+-+.+=|..+|+.+..+.-.+++++.+.|.+.+|+...|+|+=
T Consensus 56 ~~~~v~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (115)
T 1uiz_A 56 PCAVCSLCSIGKIGGPQNKSYTKLLCDILTKQLNIPANRVYIN 98 (115)
T ss_dssp SCEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcceEEEE
Confidence 3456678889999988888999999999999889999988873
No 24
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=36.60 E-value=62 Score=25.44 Aligned_cols=51 Identities=16% Similarity=0.304 Sum_probs=33.1
Q ss_pred cCCCCcccccCCCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHH
Q 021602 150 HGEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAV 213 (310)
Q Consensus 150 HGEpG~~r~~~~sa~elv~~ml~~ll~~~r~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~ 213 (310)
|+=||.....-.+..++ +.++..+. +.|...+|+|| |.|.-...-+-+++.
T Consensus 24 hnypgryirtatssqdi-rdiiksmk---------dngkplvvfvn---gasqndvnefqneak 74 (112)
T 2lnd_A 24 HNYPGRYIRTATSSQDI-RDIIKSMK---------DNGKPLVVFVN---GASQNDVNEFQNEAK 74 (112)
T ss_dssp HHSCTTTEEEECSHHHH-HHHHHHHT---------TCCSCEEEEEC---SCCHHHHHHHHHHHH
T ss_pred cCCCCceeeeccchhhH-HHHHHHHH---------hcCCeEEEEec---CcccccHHHHHHHHH
Confidence 88899876666676666 44444442 35889999999 455555555555443
No 25
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=35.53 E-value=45 Score=27.43 Aligned_cols=73 Identities=19% Similarity=0.265 Sum_probs=45.5
Q ss_pred HHHHHHHHHh--ccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCcccccchhhHHHHH
Q 021602 16 VDSILAGIHA--VTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIA 93 (310)
Q Consensus 16 ~~qIl~ai~~--v~~~~GvL~iv~NYtGD~LNFgmA~E~A~~~Gi~v~~ViV~DDvA~~~~~~~~gRRGlAGtvlv~KIa 93 (310)
.+++.++|+. ++.++|||+++== |=-.||. ....+..+.++++| +=|. +-++.+++
T Consensus 48 ~~~i~~~i~~~~~d~g~GVLiL~Dm--GSp~n~a--~~l~~~~~~~v~vI---~gvn---------------lpmllea~ 105 (139)
T 3gdw_A 48 YEQLRNQVITQKESLNNGILLLTDM--GSLNSFG--NMLFEETGIRTKAI---TMTS---------------TMIVLEAI 105 (139)
T ss_dssp HHHHHHHHHTSTGGGTTCEEEEECS--GGGGGHH--HHHHHHHCCCEEEE---CSCC---------------HHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCCCEEEEEeC--CCHHHHH--HHHHHhhCCCEEEE---eCCC---------------HHHHHHHH
Confidence 3556667777 7789999999932 5555553 33333336677664 2222 23455544
Q ss_pred hHHHHcCCCHHHHHHHHH
Q 021602 94 GAAAAAGLSLADVAAEAK 111 (310)
Q Consensus 94 GAaAe~G~sL~ev~~~a~ 111 (310)
-.+..+.+|+|+++.++
T Consensus 106 -~~~~~~~~L~el~~~~~ 122 (139)
T 3gdw_A 106 -RMASVGRSLEDIYQNIQ 122 (139)
T ss_dssp -HHHHTTCCHHHHHHHHH
T ss_pred -HHhhcCCCHHHHHHHHH
Confidence 33457999999999884
No 26
>4dh4_A MIF; trimer, isomerase; 1.82A {Toxoplasma gondii}
Probab=35.52 E-value=16 Score=28.38 Aligned_cols=42 Identities=14% Similarity=0.193 Sum_probs=36.2
Q ss_pred eEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeee
Q 021602 189 RVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (310)
Q Consensus 189 ~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG 230 (310)
-..+-|..+|+.+...---+.+.+.+.|++.+|+...|+|+=
T Consensus 57 ~a~v~i~~ig~~~~e~~~~l~~~i~~~l~~~Lgi~~~riyI~ 98 (114)
T 4dh4_A 57 CAFIRVASIGGITSSTNCKIAAALSAACERHLGVPKNRIYTT 98 (114)
T ss_dssp CEEEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred eEEEEEEEEcCCCHHHHHHHHHHHHHHHHHHhCcCcccEEEE
Confidence 356778889999997777899999999999999999999873
No 27
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=35.41 E-value=20 Score=27.58 Aligned_cols=43 Identities=14% Similarity=0.206 Sum_probs=36.8
Q ss_pred CeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeee
Q 021602 188 NRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (310)
Q Consensus 188 d~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG 230 (310)
+-+.+=|...|+.+..+.--+++++.+.|++.+|+...|+|+=
T Consensus 56 ~~~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (112)
T 3b64_A 56 PVACVRVEALGGYGPSEPEKVTSIVTAAITKECGIVADRIFVL 98 (112)
T ss_dssp SCEEEEEECTTCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcCcceEEEE
Confidence 3456678889999988888999999999999989999998874
No 28
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=34.07 E-value=28 Score=27.13 Aligned_cols=44 Identities=16% Similarity=0.120 Sum_probs=37.4
Q ss_pred CCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeee
Q 021602 187 GNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (310)
Q Consensus 187 gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG 230 (310)
.+-+.+=|..+|+.+..+.-.+++++.+.|.+.+|+...|+|+=
T Consensus 55 ~~~~~i~I~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (119)
T 2os5_A 55 NPVAVIKVESIGALSADDNIRHTQKITQFCQDTLKLPKDKVIIT 98 (119)
T ss_dssp SSCEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CCeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcccEEEE
Confidence 34466778889999988888999999999999889999998874
No 29
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=33.72 E-value=22 Score=27.35 Aligned_cols=43 Identities=14% Similarity=0.152 Sum_probs=36.5
Q ss_pred CeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeee
Q 021602 188 NRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (310)
Q Consensus 188 d~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG 230 (310)
+-+.+=|..+|+.+..+.-.+++++.+.|++.+|+...|+|+=
T Consensus 55 ~~~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 97 (113)
T 1hfo_A 55 PAAFGTLMSIGGIEPSRNRDHSAKLFDHLNTKLGIPKNRMYIH 97 (113)
T ss_dssp SCEEEEEEESSSCSHHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcCeEEEE
Confidence 3356668889999988888999999999999889999988873
No 30
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=33.44 E-value=19 Score=29.28 Aligned_cols=43 Identities=14% Similarity=0.206 Sum_probs=37.1
Q ss_pred CeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeee
Q 021602 188 NRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (310)
Q Consensus 188 d~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG 230 (310)
+-+.+-|..+|+.+.-+--.+++.+.+.|++++||...|+|+-
T Consensus 77 P~a~v~i~sig~~~~e~n~~~s~~i~~~l~~~LgI~~~riyI~ 119 (133)
T 3fwu_A 77 PVACVRVEALGGYGPSEPEKVTSIVTAAITKECGIVADRIFVL 119 (133)
T ss_dssp SCEEEEEECTTCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcChhhEEEE
Confidence 3466778889999887777899999999999999999999984
No 31
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=29.72 E-value=51 Score=26.97 Aligned_cols=37 Identities=8% Similarity=0.099 Sum_probs=24.5
Q ss_pred eecCCccCCC-CHHHHHHHHHhccC-CCceEEEeecccc
Q 021602 5 AICGDVFASP-PVDSILAGIHAVTG-PMGCLLIVTNYTG 41 (310)
Q Consensus 5 av~G~VFaSP-s~~qIl~ai~~v~~-~~GvL~iv~NYtG 41 (310)
.++||+|-.. ++++..+.++.+.. +..+++|.+|+--
T Consensus 37 i~~GDl~~~~~~~~~~~~~~~~l~~~~~pv~~v~GNHD~ 75 (228)
T 1uf3_A 37 ALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYVPGPQDA 75 (228)
T ss_dssp EEESCSSCTTCCHHHHHHHHHHHGGGCSCEEEECCTTSC
T ss_pred EECCCCCCCCCCHHHHHHHHHHHHhcCCcEEEECCCCCc
Confidence 4689998765 66655445544432 4569999999943
No 32
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=29.15 E-value=29 Score=31.39 Aligned_cols=51 Identities=18% Similarity=0.208 Sum_probs=26.9
Q ss_pred eecCC-cc--CCCCHHH---HHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcC
Q 021602 5 AICGD-VF--ASPPVDS---ILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEG 57 (310)
Q Consensus 5 av~G~-VF--aSPs~~q---Il~ai~~v~~~~GvL~iv~NYtGD~LNFgmA~E~A~~~G 57 (310)
.++|| +| ..|+... ..+.++.+.....|++|.+|+--..+ +...+..+..|
T Consensus 66 liaGD~l~d~~~~~~~~~~~~~~~l~~L~~~~pv~~i~GNHD~~~~--~~~~~~l~~~g 122 (336)
T 2q8u_A 66 LLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAPVVVLPGNHDWKGL--KLFGNFVTSIS 122 (336)
T ss_dssp EEESCSBSCSSCCCHHHHHHHHHHHHHHHHHSCEEECCC------C--HHHHHHHHHHC
T ss_pred EECCccccCCCCCCHHHHHHHHHHHHHHHhcCCEEEECCCCCcccc--ccHHHHHHhcC
Confidence 46999 99 4566543 44455544322679999999965543 33344555556
No 33
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=28.81 E-value=1e+02 Score=24.47 Aligned_cols=52 Identities=12% Similarity=0.143 Sum_probs=36.5
Q ss_pred ceeecCCcc--CCCCHHHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEE
Q 021602 3 TAAICGDVF--ASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIV 63 (310)
Q Consensus 3 dAav~G~VF--aSPs~~qIl~ai~~v~~~~GvL~iv~NYtGD~LNFgmA~E~A~~~Gi~v~~V 63 (310)
+..++++.. .-|.++-+..+++... ..-|++| ||..| ++ +.|++.|+++-+|
T Consensus 116 ~~~~~~~~~~~~Kp~~~~~~~~~~~~~-~~~~~~v-----GD~~~-Di--~~a~~aG~~~~~~ 169 (201)
T 2w43_A 116 KGIFSAESVKEYKPSPKVYKYFLDSIG-AKEAFLV-----SSNAF-DV--IGAKNAGMRSIFV 169 (201)
T ss_dssp SEEEEGGGGTCCTTCHHHHHHHHHHHT-CSCCEEE-----ESCHH-HH--HHHHHTTCEEEEE
T ss_pred cEEEehhhcCCCCCCHHHHHHHHHhcC-CCcEEEE-----eCCHH-Hh--HHHHHCCCEEEEE
Confidence 444555432 4688888888888887 6777776 89988 65 5578889876443
No 34
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=28.56 E-value=19 Score=29.23 Aligned_cols=42 Identities=14% Similarity=0.249 Sum_probs=35.8
Q ss_pred eEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeee
Q 021602 189 RVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (310)
Q Consensus 189 ~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG 230 (310)
-+.+-|..+|+.+.-+---+++++.+.|++++||...|+|+=
T Consensus 78 ~a~v~v~sig~~~~e~n~~~s~~i~~~l~~~LgI~~~rvyI~ 119 (133)
T 3fwt_A 78 AAYVRVESWGEYAPSKPKMMTPRIAAAITKECGIPAERIYVF 119 (133)
T ss_dssp CEEEEEEEEECCCTHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred eEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCcChhhEEEE
Confidence 356667777888887778899999999999999999999984
No 35
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=28.43 E-value=25 Score=27.13 Aligned_cols=43 Identities=14% Similarity=0.284 Sum_probs=36.5
Q ss_pred CeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeee
Q 021602 188 NRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (310)
Q Consensus 188 d~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG 230 (310)
+-+.+=|..+|+.+..+.-.+++++.+.|.+.+|+...|+|+=
T Consensus 56 ~~~~v~i~~~~g~t~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (115)
T 2xcz_A 56 PTCYVEVKSIGALDGSRTQEVSELVCGHIEQNLGIPADRIYIG 98 (115)
T ss_dssp SCEEEEEEESSCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred cEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcccEEEE
Confidence 3356667789989988888999999999999889999988873
No 36
>3t5s_A Gilaa.00834.A, macrophage migration inhibitory factor; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Giardia lamblia}
Probab=26.58 E-value=19 Score=29.39 Aligned_cols=43 Identities=14% Similarity=0.073 Sum_probs=32.9
Q ss_pred CeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeee
Q 021602 188 NRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (310)
Q Consensus 188 d~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG 230 (310)
+-+.+-|..+|+.+.-+---+++.+.+.|++.+|+...|+|+=
T Consensus 77 p~a~v~i~sig~~t~e~n~~~s~~i~~~l~~~Lgi~~~riyI~ 119 (135)
T 3t5s_A 77 LCCFVDFYCIGVISQAKNPSISAAITGCLTQHFKVKPERVYIS 119 (135)
T ss_dssp SCEEEEEECCC-----CCHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred eEEEEEEEEEEEEeccCCchHHHHHHHHHHHhcccCccEEEEE
Confidence 3466778889999888788899999999999999999999984
No 37
>2id1_A Hypothetical protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.00A {Chromobacterium violaceum} SCOP: d.218.1.12
Probab=26.51 E-value=2e+02 Score=23.63 Aligned_cols=92 Identities=7% Similarity=0.054 Sum_probs=58.3
Q ss_pred CHHHHHHHHHHHHHccc---------CCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee--e
Q 021602 162 PVDVVVSHVLKQILSTE---------TNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT--G 230 (310)
Q Consensus 162 sa~elv~~ml~~ll~~~---------r~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~v--G 230 (310)
+..++++.+++.|-+.+ +.... =-.+.|+.+ |+|.=-...+++++.+.|++. |+++.++-- .
T Consensus 2 ~~~~l~~~i~~al~dkKa~DI~vlDv~~~s~---~~DyfVIaT---g~S~rqv~Aiad~v~~~lk~~-g~~~~~~EG~~~ 74 (130)
T 2id1_A 2 EIQEISKLAIEALEDIKGKDIIELDTSKLTS---LFQRMIVAT---GDSNRQVKALANSVQVKLKEA-GVDIVGSEGHES 74 (130)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEEEEEGGGTCS---SCSEEEEEE---CSSHHHHHHHHHHHHHHHHHT-TCCCCBCCSTTT
T ss_pred CHHHHHHHHHHHHHHcCCCCeEEEEcCCCCc---ccCEEEEEE---cCCHHHHHHHHHHHHHHHHHc-CCcCccccCCCC
Confidence 45678888777775543 11111 134777887 788888999999999999988 987665421 1
Q ss_pred ccccccCCCcceEEEecccH----HHHHhh--cCCC
Q 021602 231 SFMTSLDMAGFSISIMKADE----VILKHL--DATT 260 (310)
Q Consensus 231 ~~~TSldm~GfSiTLl~ldd----~ll~ll--daP~ 260 (310)
.-=.-+|...+-+-++.=+. +|.+|| |+|.
T Consensus 75 ~~WvLlD~GdVvVHIf~~e~RefY~LE~LW~~da~~ 110 (130)
T 2id1_A 75 GEWVLVDAGDVVVHVMLPAVRDYYDIEALWGGQKPS 110 (130)
T ss_dssp SSEEEEEETTEEEEEECHHHHHHHCHHHHTTCCCCC
T ss_pred CCEEEEecCCEEEEcCCHHHHhHcCHHHHhcCCCcc
Confidence 11223455555555554332 488899 6664
No 38
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=24.85 E-value=26 Score=27.67 Aligned_cols=43 Identities=16% Similarity=0.170 Sum_probs=32.2
Q ss_pred CeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeee
Q 021602 188 NRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (310)
Q Consensus 188 d~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG 230 (310)
+-+.+=|..+|+.+.-+.-.+++++.+.|.+.+|+...|+||=
T Consensus 56 p~~~v~I~~~~g~t~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (125)
T 2wkb_A 56 GYCFVRLTSIGGINRSNNSLLADKITKILSNHLSVKPRRVYIE 98 (125)
T ss_dssp SCEEEEEECC-----CTHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CcEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCcCcceEEEE
Confidence 3356678889999988888999999999999889999988873
No 39
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=23.86 E-value=1.7e+02 Score=23.83 Aligned_cols=67 Identities=19% Similarity=0.196 Sum_probs=41.6
Q ss_pred ceeecCCccCCCCH---HHHHHHHHhccCCCceEEEeeccccccc------------------c---H-HHHHHHHHhcC
Q 021602 3 TAAICGDVFASPPV---DSILAGIHAVTGPMGCLLIVTNYTGDRL------------------N---F-GLAAEQAKSEG 57 (310)
Q Consensus 3 dAav~G~VFaSPs~---~qIl~ai~~v~~~~GvL~iv~NYtGD~L------------------N---F-gmA~E~A~~~G 57 (310)
|.+++.++|--=+. .++++.++.+-.+.|+++++-|..-... . | .+..+.+++.|
T Consensus 104 D~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~G 183 (219)
T 3jwg_A 104 DAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYG 183 (219)
T ss_dssp SEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHT
T ss_pred CEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCC
Confidence 56666666543333 4677777666667788888777532110 0 1 12225567789
Q ss_pred CcEEEEEecccc
Q 021602 58 YKVEIVIVGDDC 69 (310)
Q Consensus 58 i~v~~ViV~DDv 69 (310)
++|+..-++|..
T Consensus 184 f~v~~~~~g~~~ 195 (219)
T 3jwg_A 184 YSVRFLQIGEID 195 (219)
T ss_dssp EEEEEEEESCCC
T ss_pred cEEEEEecCCcc
Confidence 999999888864
No 40
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=23.50 E-value=77 Score=26.09 Aligned_cols=36 Identities=19% Similarity=0.237 Sum_probs=28.1
Q ss_pred CCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEe
Q 021602 186 RGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERV 227 (310)
Q Consensus 186 ~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~ 227 (310)
....++|++.|+|+.+.. .+.+.+.|.++ |+.|...
T Consensus 44 ~~~p~vv~~hG~~~~~~~-----~~~~~~~l~~~-g~~v~~~ 79 (315)
T 4f0j_A 44 ANGRTILLMHGKNFCAGT-----WERTIDVLADA-GYRVIAV 79 (315)
T ss_dssp CCSCEEEEECCTTCCGGG-----GHHHHHHHHHT-TCEEEEE
T ss_pred CCCCeEEEEcCCCCcchH-----HHHHHHHHHHC-CCeEEEe
Confidence 345789999999998874 55677888888 8887754
No 41
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=23.38 E-value=69 Score=29.28 Aligned_cols=52 Identities=13% Similarity=0.073 Sum_probs=33.4
Q ss_pred HHHHHHHhccCCCceEEEeecc---ccc----cccHHHHHHHHHhcCCcEEEEEecccc
Q 021602 18 SILAGIHAVTGPMGCLLIVTNY---TGD----RLNFGLAAEQAKSEGYKVEIVIVGDDC 69 (310)
Q Consensus 18 qIl~ai~~v~~~~GvL~iv~NY---tGD----~LNFgmA~E~A~~~Gi~v~~ViV~DDv 69 (310)
+++..++.+-.+.|+++|.--. .|- ..++.+..+.++..|.+..-.+|.+--
T Consensus 65 ~~l~~~~rvLk~~G~i~i~~~d~~~~g~~~~~~~~~~~i~~~~~~~Gf~~~~~iiW~k~ 123 (323)
T 1boo_A 65 SFAKVVNKKLKPDGSFVVDFGGAYMKGVPARSIYNFRVLIRMIDEVGFFLAEDFYWFNP 123 (323)
T ss_dssp HHHHHHHHHEEEEEEEEEEECCCEETTEEEECCHHHHHHHHHHHTTCCEEEEEEEEECS
T ss_pred HHHHHHHHHCcCCcEEEEEECCEecCCCcccccchHHHHHHHHHhCCCEEEEEEEEecC
Confidence 3444444555678998886432 232 346777778788889887766776543
No 42
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=23.00 E-value=2.8e+02 Score=22.32 Aligned_cols=57 Identities=16% Similarity=0.197 Sum_probs=37.4
Q ss_pred ceeecCCccCCCCHHHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEE
Q 021602 3 TAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVI 64 (310)
Q Consensus 3 dAav~G~VFaSPs~~qIl~ai~~v~~~~GvL~iv~NYtGD~LNFgmA~E~A~~~Gi~v~~Vi 64 (310)
|.+++...+ +...++++.+..+-.+.|.|++..... -++.-..+..++.|++++.+-
T Consensus 110 D~i~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~~l~~~g~~~~~~~ 166 (204)
T 3e05_A 110 DRVFIGGSG--GMLEEIIDAVDRRLKSEGVIVLNAVTL---DTLTKAVEFLEDHGYMVEVAC 166 (204)
T ss_dssp SEEEESCCT--TCHHHHHHHHHHHCCTTCEEEEEECBH---HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEECCCC--cCHHHHHHHHHHhcCCCeEEEEEeccc---ccHHHHHHHHHHCCCceeEEE
Confidence 444444433 257788888877778889999874432 246666777788897555443
No 43
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=21.72 E-value=1.8e+02 Score=25.74 Aligned_cols=52 Identities=10% Similarity=0.069 Sum_probs=34.9
Q ss_pred CHHHHHHHHHhccCCCceEEEeecc---ccccccHHHHHHHHHhcCCcEEEEEecccccC
Q 021602 15 PVDSILAGIHAVTGPMGCLLIVTNY---TGDRLNFGLAAEQAKSEGYKVEIVIVGDDCAL 71 (310)
Q Consensus 15 s~~qIl~ai~~v~~~~GvL~iv~NY---tGD~LNFgmA~E~A~~~Gi~v~~ViV~DDvA~ 71 (310)
..+++-++++...... .++++.|. ||.+++..--++.|++.|+ .+|-|++-.
T Consensus 154 d~~~l~~~l~~~~~~~-~~v~~~~~~nptG~~~~l~~i~~l~~~~~~----~li~De~~~ 208 (384)
T 1bs0_A 154 DVTHLARLLASPCPGQ-QMVVTEGVFSMDGDSAPLAEIQQVTQQHNG----WLMVDDAHG 208 (384)
T ss_dssp CHHHHHHHHHSCCSSC-EEEEEESBCTTTCCBCCHHHHHHHHHHTTC----EEEEECTTT
T ss_pred CHHHHHHHHHhcCCCC-eEEEEeCCCCCCCCccCHHHHHHHHHHcCc----EEEEECCcc
Confidence 4566666665432222 56666556 9999998877888888774 566787753
No 44
>3ihu_A Transcriptional regulator, GNTR family; YP_298823.1, DNA binding protein, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.92A {Ralstonia eutropha}
Probab=21.53 E-value=1.6e+02 Score=24.81 Aligned_cols=63 Identities=17% Similarity=0.230 Sum_probs=46.3
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHH----HHHHHHHhhhhhcCCeEEEeeeeccccccC
Q 021602 162 PVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMI----AAGKAVPNLQLEHGLAVERVYTGSFMTSLD 237 (310)
Q Consensus 162 sa~elv~~ml~~ll~~~r~~l~~~~gd~v~vlVNnLG~ts~lEl~i----~~~~v~~~L~~~~gi~v~r~~vG~~~TSld 237 (310)
-.+.+.+.+.+.|++ -.+.+|+++- .+ ...|.+- -.|++.+.|+.. |+-..+...|.|++.++
T Consensus 17 ~~~~v~~~l~~~I~~-----g~l~pG~~L~--E~-----~La~~lgVSRtpVREAl~~L~~e-Glv~~~~~~G~~V~~~~ 83 (222)
T 3ihu_A 17 ASDTVFFGIMSGLEL-----GTFVPGQRLV--ET-----DLVAHFGVGRNSVREALQRLAAE-GIVDLQRHRGAVIRRLS 83 (222)
T ss_dssp HHHHHHHHHHHHHHH-----TSSCTTCEEC--HH-----HHHHHHTCCHHHHHHHHHHHHHT-TSEEECSTTCEEECCCC
T ss_pred HHHHHHHHHHHHHHh-----CCCCCCCccC--HH-----HHHHHHCCCHHHHHHHHHHHHHC-CCEEEecCCCeEEecCC
Confidence 346677888888887 3678999853 22 1223332 578999999999 99888888999998765
No 45
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=21.17 E-value=89 Score=26.68 Aligned_cols=34 Identities=24% Similarity=0.347 Sum_probs=25.8
Q ss_pred CCe-EEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEE
Q 021602 187 GNR-VVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVER 226 (310)
Q Consensus 187 gd~-v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r 226 (310)
|.+ -|||+-|+|+++.. .+.+.+.|.++ |+.|..
T Consensus 49 G~~~~VlllHG~~~s~~~-----~~~la~~La~~-Gy~Via 83 (281)
T 4fbl_A 49 GSRIGVLVSHGFTGSPQS-----MRFLAEGFARA-GYTVAT 83 (281)
T ss_dssp CSSEEEEEECCTTCCGGG-----GHHHHHHHHHT-TCEEEE
T ss_pred CCCceEEEECCCCCCHHH-----HHHHHHHHHHC-CCEEEE
Confidence 444 48999999998753 45667888888 998874
No 46
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=21.11 E-value=1.2e+02 Score=24.29 Aligned_cols=78 Identities=15% Similarity=0.233 Sum_probs=45.2
Q ss_pred HHHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCcccccchhhHHHHHhH
Q 021602 16 VDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGA 95 (310)
Q Consensus 16 ~~qIl~ai~~v~~~~GvL~iv~NYtGD~LNFgmA~E~A~~~Gi~v~~ViV~DDvA~~~~~~~~gRRGlAGtvlv~KIaGA 95 (310)
.+++.++++.++.++|||+++==|-|=..|+ |.+..+. ..+++.| + -+.. -++..++ .
T Consensus 45 ~~~i~~~i~~~~~~~gvliLtDl~GGSp~n~--a~~~~~~-~~~v~vi--~-GvNl---------------pmlle~~-~ 102 (135)
T 1pdo_A 45 IEKYNAQLAKLDTTKGVLFLVDTWGGSPFNA--ASRIVVD-KEHYEVI--A-GVNI---------------PMLVETL-M 102 (135)
T ss_dssp HHHHHHHHTTSCCTTCEEEEESSTTSHHHHH--HHHHHTT-CTTEEEE--E-SCCH---------------HHHHHHH-H
T ss_pred HHHHHHHHHhcCCCCCEEEEEECCCCCHHHH--HHHHHhc-cCCEEEE--e-CCCH---------------HHHHHHH-H
Confidence 3456667777778889999984444444666 5555543 2345432 1 1222 2244433 2
Q ss_pred HHHcCCCHHHHHHHHHHHHh
Q 021602 96 AAAAGLSLADVAAEAKRASE 115 (310)
Q Consensus 96 aAe~G~sL~ev~~~a~~~~~ 115 (310)
.+..+.+++|+.+.+.....
T Consensus 103 ~~~~~~~l~el~~~~~~~g~ 122 (135)
T 1pdo_A 103 ARDDDPSFDELVALAVETGR 122 (135)
T ss_dssp HHTTCCCHHHHHHHHHHHHH
T ss_pred hcccCCCHHHHHHHHHHHhh
Confidence 34458999999876665543
No 47
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=21.09 E-value=1.1e+02 Score=23.89 Aligned_cols=51 Identities=25% Similarity=0.215 Sum_probs=28.6
Q ss_pred ccCCCCH---HHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEE
Q 021602 10 VFASPPV---DSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVI 64 (310)
Q Consensus 10 VFaSPs~---~qIl~ai~~v~~~~GvL~iv~NYtGD~LNFgmA~E~A~~~Gi~v~~Vi 64 (310)
++-+|.. +.+++.|+.+. --++|..-|-.|. .+--|...|...|++|++++
T Consensus 7 ~~f~p~~~~~~~~~~~i~~A~---~~I~i~~~~~~~~-~i~~aL~~a~~rGV~Vril~ 60 (155)
T 1byr_A 7 VGYSPEGSARVLVLSAIDSAK---TSIRMMAYSFTAP-DIMKALVAAKKRGVDVKIVI 60 (155)
T ss_dssp EEEETTTHHHHHHHHHHHHCS---SEEEEEESSBCCH-HHHHHHHHHHHTTCEEEEEE
T ss_pred EEECCCCcHHHHHHHHHHHHh---hEEEEEEEEeCCH-HHHHHHHHHHHCCCEEEEEE
Confidence 4456653 34555555544 3566665555441 23334555667899998765
No 48
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=20.75 E-value=1.8e+02 Score=25.51 Aligned_cols=53 Identities=13% Similarity=0.050 Sum_probs=36.0
Q ss_pred CCHHHHHHHHHhccCCCceEEEe--eccccccccHHHHHHHHHhcCCcEEEEEecccccC
Q 021602 14 PPVDSILAGIHAVTGPMGCLLIV--TNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCAL 71 (310)
Q Consensus 14 Ps~~qIl~ai~~v~~~~GvL~iv--~NYtGD~LNFgmA~E~A~~~Gi~v~~ViV~DDvA~ 71 (310)
++++++.++++.-...+ ++++. .|.||.++...--++.|++.|+ .++-|++-.
T Consensus 132 ~d~~~l~~~l~~~~~~~-~v~~~~~~nptG~~~~l~~i~~l~~~~~~----~li~D~a~~ 186 (386)
T 2dr1_A 132 VKPEDLDDALRKNPDVE-AVTITYNETSTGVLNPLPELAKVAKEHDK----LVFVDAVSA 186 (386)
T ss_dssp CCHHHHHHHHHHCTTCC-EEEEESEETTTTEECCHHHHHHHHHHTTC----EEEEECTTT
T ss_pred CCHHHHHHHHhcCCCCc-EEEEEeecCCcchhCCHHHHHHHHHHcCC----eEEEEcccc
Confidence 57888888886523333 34443 5779999998777888888775 455666643
No 49
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=20.65 E-value=1.5e+02 Score=23.93 Aligned_cols=64 Identities=11% Similarity=0.054 Sum_probs=46.0
Q ss_pred cceeecCCccCCCCHHHHHHHHHhccCCCceEEEeeccccc----------------------------cccHHHHHHHH
Q 021602 2 LTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGD----------------------------RLNFGLAAEQA 53 (310)
Q Consensus 2 LdAav~G~VFaSPs~~qIl~ai~~v~~~~GvL~iv~NYtGD----------------------------~LNFgmA~E~A 53 (310)
.|.+++..+|-.+.+.+++..++.+-.+.|.|++....... ....+--.+.+
T Consensus 117 fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 196 (227)
T 3e8s_A 117 YDLICANFALLHQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNAL 196 (227)
T ss_dssp EEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHH
T ss_pred ccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHH
Confidence 46777777777888899999998888889999987542111 11445667778
Q ss_pred HhcCCcEEEEEe
Q 021602 54 KSEGYKVEIVIV 65 (310)
Q Consensus 54 ~~~Gi~v~~ViV 65 (310)
++.|.++..+.-
T Consensus 197 ~~aGf~~~~~~~ 208 (227)
T 3e8s_A 197 DMAGLRLVSLQE 208 (227)
T ss_dssp HHTTEEEEEEEC
T ss_pred HHcCCeEEEEec
Confidence 888988876654
Done!