Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>021608
MTLLEVITKAVANHELPGSQLEHPIILNPDNIFLNLKPELEGASAASLVNPVSGWQISEV
DTYLIDSGKKFHAKLKRKLKDTNNFDKDEFIGILNPYLQKIGEKVGISTRINRSDSGYTQ
GLIEKVGFLMGRDVASLVLEACISLRIWELVETLIVHGLVDHSSYSNLVTRLATEKRSDL
LCLCVKYSPDLGSSELLCILKYFLCPPKDAYGSMGSVRMEWESQALLAIEKAGPCPEASF
GLGLKACDWVPKLEVIVQCLGLVLDENFSSLVLLPEFQEELRSIEGVVSTLASEARYCCS
LANVVKRFGS

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  021608
        (310 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2034969 - symbol:AT1G18850 "AT1G18850" species...   628  2.5e-83   2


>TAIR|locus:2034969 [details] [associations]
            symbol:AT1G18850 "AT1G18850" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005730 "nucleolus" evidence=IDA] [GO:0001510 "RNA
            methylation" evidence=RCA] [GO:0006626 "protein targeting to
            mitochondrion" evidence=RCA] EMBL:CP002684 GO:GO:0005730
            EMBL:AC011809 EMBL:AY056212 EMBL:AY096629 IPI:IPI00547005
            PIR:D86322 RefSeq:NP_564065.1 UniGene:At.11907 STRING:Q9M9V4
            PRIDE:Q9M9V4 DNASU:838466 EnsemblPlants:AT1G18850.1 GeneID:838466
            KEGG:ath:AT1G18850 TAIR:At1g18850 InParanoid:Q9M9V4 OMA:ELCLHYL
            PhylomeDB:Q9M9V4 ProtClustDB:CLSN2687861 ArrayExpress:Q9M9V4
            Genevestigator:Q9M9V4 Uniprot:Q9M9V4
        Length = 399

 Score = 628 (226.1 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
 Identities = 132/236 (55%), Positives = 163/236 (69%)

Query:     1 MTLLEVITKAVANHELPGSQLEHPIILNPDNIFLNLKPELEGASAASLVNPVSGWQISEV 60
             MTLLE I+ AVAN +   SQ ++PI L+ D IF NLKP+LE  +  +LVNP+SGW ISE 
Sbjct:     1 MTLLEAISNAVANQDKVDSQSDYPIPLSHDGIFANLKPKLENPNLGTLVNPISGWGISES 60

Query:    61 DTYLIDSGXXXXXXXXXXXXDTNNFDKDEFIGILNPYLQKIGEKVGISTRINRSDSGYTQ 120
             D  +ID G            DTN F KDEF+ +L  +L+KIGEKVGIS   +    G   
Sbjct:    61 DVEVIDLGKKFSSKLKRKLKDTNGFVKDEFVKMLKQFLEKIGEKVGISEAESEMVLGDQA 120

Query:   121 G-----LIEKVGFLMGRDVASLVLEACISLRIWELVETLIVHGLVDHSSYSNLVTRLATE 175
             G     L+EK GFLMGRDV+ LVL+ CISL +WELVE LI + LVDHSSYS LV+ L  +
Sbjct:   121 GSEIQILVEKNGFLMGRDVSGLVLKGCISLEMWELVEILISNSLVDHSSYSYLVSNLVEK 180

Query:   176 KRSDLLCLCVKYSPDLGSSELLCILKYFLCPPKDAYGSMGSVRMEWESQALLAIEK 231
             +RSDLLC+ +K + DLG++ELL ILKYFLCP K+A  +M  VR EWESQA+LAIEK
Sbjct:   181 QRSDLLCVVIKEASDLGATELLSILKYFLCPSKEAISTMAKVREEWESQAMLAIEK 236

 Score = 226 (84.6 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
 Identities = 43/76 (56%), Positives = 58/76 (76%)

Query:   231 KAGPCPEASFGLGLKACDWVPKLEVIVQCLGLVLDENFSSLVLLPEFQEELRSIEGVVST 290
             +AGPCP+A+  LGLK C+WVP+L  I +CLGL++DENFS+LVL  +  EEL+SI  V   
Sbjct:   315 QAGPCPKAASKLGLKLCNWVPELTDITKCLGLLIDENFSTLVLYSDLHEELKSIARVADG 374

Query:   291 LASEARYCCSLANVVK 306
             LASE++  C +ANVV+
Sbjct:   375 LASESKLSCFVANVVE 390


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.137   0.406    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      310       298   0.00094  115 3  11 22  0.40    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  618 (66 KB)
  Total size of DFA:  215 KB (2119 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.68u 0.09s 21.77t   Elapsed:  00:00:01
  Total cpu time:  21.68u 0.09s 21.77t   Elapsed:  00:00:01
  Start:  Fri May 10 03:20:11 2013   End:  Fri May 10 03:20:12 2013

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