BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021611
(310 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q1CM50|NLPI_YERPN Lipoprotein NlpI OS=Yersinia pestis bv. Antiqua (strain Nepal516)
GN=nlpI PE=3 SV=1
Length = 294
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 131 GMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNPN 190
G+ L + G+ + FD +ELDP RG++LYY RF + + +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYARLNRGIALYYGGRFPLAQDDLQAFYQDDPN 162
Query: 191 DTEESIWCFLCEAQL 205
D S+W +L E ++
Sbjct: 163 DPFRSLWLYLVEREI 177
>sp|Q7CKI5|NLPI_YERPE Lipoprotein NlpI OS=Yersinia pestis GN=nlpI PE=3 SV=1
Length = 294
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 131 GMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNPN 190
G+ L + G+ + FD +ELDP RG++LYY RF + + +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYARLNRGIALYYGGRFPLAQDDLQAFYQDDPN 162
Query: 191 DTEESIWCFLCEAQL 205
D S+W +L E ++
Sbjct: 163 DPFRSLWLYLVEREI 177
>sp|Q1C3L9|NLPI_YERPA Lipoprotein NlpI OS=Yersinia pestis bv. Antiqua (strain Antiqua)
GN=nlpI PE=3 SV=1
Length = 294
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 131 GMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNPN 190
G+ L + G+ + FD +ELDP RG++LYY RF + + +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYARLNRGIALYYGGRFPLAQDDLQAFYQDDPN 162
Query: 191 DTEESIWCFLCEAQL 205
D S+W +L E ++
Sbjct: 163 DPFRSLWLYLVEREI 177
>sp|Q7CPQ1|NLPI_SALTY Lipoprotein NlpI OS=Salmonella typhimurium (strain LT2 / SGSC1412 /
ATCC 700720) GN=nlpI PE=3 SV=1
Length = 294
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 131 GMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNPN 190
G+ L + G+ + FD +ELDP RG++LYY R + + +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPN 162
Query: 191 DTEESIWCFLCEAQL 205
D S+W +L E +L
Sbjct: 163 DPYRSLWLYLVEQKL 177
>sp|Q8XG77|NLPI_SALTI Lipoprotein NlpI OS=Salmonella typhi GN=nlpI PE=3 SV=1
Length = 294
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 131 GMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNPN 190
G+ L + G+ + FD +ELDP RG++LYY R + + +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPN 162
Query: 191 DTEESIWCFLCEAQL 205
D S+W +L E +L
Sbjct: 163 DPYRSLWLYLVEQKL 177
>sp|Q57JI4|NLPI_SALCH Lipoprotein NlpI OS=Salmonella choleraesuis (strain SC-B67) GN=nlpI
PE=3 SV=1
Length = 294
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 131 GMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNPN 190
G+ L + G+ + FD +ELDP RG++LYY R + + +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPN 162
Query: 191 DTEESIWCFLCEAQL 205
D S+W +L E +L
Sbjct: 163 DPYRSLWLYLVEQKL 177
>sp|Q31W42|NLPI_SHIBS Lipoprotein NlpI OS=Shigella boydii serotype 4 (strain Sb227)
GN=nlpI PE=3 SV=1
Length = 294
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 131 GMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNPN 190
G+ L + G+ + FD +ELDP RG++LYY R + + +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPN 162
Query: 191 DTEESIWCFLCEAQL 205
D S+W +L E +L
Sbjct: 163 DPFRSLWLYLAEQKL 177
>sp|P0AFB4|NLPI_SHIFL Lipoprotein NlpI OS=Shigella flexneri GN=nlpI PE=3 SV=1
Length = 294
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 131 GMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNPN 190
G+ L + G+ + FD +ELDP RG++LYY R + + +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPN 162
Query: 191 DTEESIWCFLCEAQL 205
D S+W +L E +L
Sbjct: 163 DPFRSLWLYLAEQKL 177
>sp|P0AFB1|NLPI_ECOLI Lipoprotein NlpI OS=Escherichia coli (strain K12) GN=nlpI PE=1 SV=1
Length = 294
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 131 GMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNPN 190
G+ L + G+ + FD +ELDP RG++LYY R + + +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPN 162
Query: 191 DTEESIWCFLCEAQL 205
D S+W +L E +L
Sbjct: 163 DPFRSLWLYLAEQKL 177
>sp|P0AFB2|NLPI_ECOL6 Lipoprotein NlpI OS=Escherichia coli O6:H1 (strain CFT073 / ATCC
700928 / UPEC) GN=nlpI PE=3 SV=1
Length = 294
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 131 GMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNPN 190
G+ L + G+ + FD +ELDP RG++LYY R + + +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPN 162
Query: 191 DTEESIWCFLCEAQL 205
D S+W +L E +L
Sbjct: 163 DPFRSLWLYLAEQKL 177
>sp|Q0TCU6|NLPI_ECOL5 Lipoprotein NlpI OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC)
GN=nlpI PE=3 SV=1
Length = 294
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 131 GMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNPN 190
G+ L + G+ + FD +ELDP RG++LYY R + + +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPN 162
Query: 191 DTEESIWCFLCEAQL 205
D S+W +L E +L
Sbjct: 163 DPFRSLWLYLAEQKL 177
>sp|D5D1H3|NLPI_ECOKI Lipoprotein NlpI OS=Escherichia coli O18:K1:H7 (strain IHE3034 /
ExPEC) GN=nlpI PE=3 SV=1
Length = 294
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 131 GMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNPN 190
G+ L + G+ + FD +ELDP RG++LYY R + + +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPN 162
Query: 191 DTEESIWCFLCEAQL 205
D S+W +L E +L
Sbjct: 163 DPFRSLWLYLAEQKL 177
>sp|A1AG68|NLPI_ECOK1 Lipoprotein NlpI OS=Escherichia coli O1:K1 / APEC GN=nlpI PE=3 SV=1
Length = 294
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 131 GMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNPN 190
G+ L + G+ + FD +ELDP RG++LYY R + + +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPN 162
Query: 191 DTEESIWCFLCEAQL 205
D S+W +L E +L
Sbjct: 163 DPFRSLWLYLAEQKL 177
>sp|B1XGX5|NLPI_ECODH Lipoprotein NlpI OS=Escherichia coli (strain K12 / DH10B) GN=nlpI
PE=3 SV=1
Length = 294
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 131 GMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNPN 190
G+ L + G+ + FD +ELDP RG++LYY R + + +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPN 162
Query: 191 DTEESIWCFLCEAQL 205
D S+W +L E +L
Sbjct: 163 DPFRSLWLYLAEQKL 177
>sp|C4ZSQ4|NLPI_ECOBW Lipoprotein NlpI OS=Escherichia coli (strain K12 / MC4100 / BW2952)
GN=nlpI PE=2 SV=1
Length = 294
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 131 GMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNPN 190
G+ L + G+ + FD +ELDP RG++LYY R + + +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPN 162
Query: 191 DTEESIWCFLCEAQL 205
D S+W +L E +L
Sbjct: 163 DPFRSLWLYLAEQKL 177
>sp|C6EH62|NLPI_ECOBD Lipoprotein NlpI OS=Escherichia coli (strain B / BL21-DE3) GN=nlpI
PE=3 SV=1
Length = 294
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 131 GMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNPN 190
G+ L + G+ + FD +ELDP RG++LYY R + + +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPN 162
Query: 191 DTEESIWCFLCEAQL 205
D S+W +L E +L
Sbjct: 163 DPFRSLWLYLAEQKL 177
>sp|E4P9W4|NLPI_ECO8N Lipoprotein NlpI OS=Escherichia coli O83:H1 (strain NRG 857C /
AIEC) GN=nlpI PE=3 SV=1
Length = 294
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 131 GMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNPN 190
G+ L + G+ + FD +ELDP RG++LYY R + + +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPN 162
Query: 191 DTEESIWCFLCEAQL 205
D S+W +L E +L
Sbjct: 163 DPFRSLWLYLAEQKL 177
>sp|P0AFB3|NLPI_ECO57 Lipoprotein NlpI OS=Escherichia coli O157:H7 GN=nlpI PE=2 SV=1
Length = 294
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 131 GMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNPN 190
G+ L + G+ + FD +ELDP RG++LYY R + + +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPN 162
Query: 191 DTEESIWCFLCEAQL 205
D S+W +L E +L
Sbjct: 163 DPFRSLWLYLAEQKL 177
>sp|B7NDE9|NLPI_ECOLU Lipoprotein NlpI OS=Escherichia coli O17:K52:H18 (strain UMN026 /
ExPEC) GN=nlpI PE=3 SV=1
Length = 294
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 131 GMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNPN 190
G+ L + G+ + FD +ELDP RG++LYY R + + +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPN 162
Query: 191 DTEESIWCFLCEAQL 205
D S+W +L E +L
Sbjct: 163 DPFRSLWLYLAEQKL 177
>sp|Q57992|Y572_METJA Uncharacterized protein MJ0572 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0572 PE=4 SV=1
Length = 86
Score = 39.7 bits (91), Expect = 0.025, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 118 NNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEG 177
+ N ++A ++G+ + +GDV ++ F+KAIEL+P + + + L+L L R+EE
Sbjct: 2 DENIKKAEYYYKKGVEVGNKGDVEKALEYFNKAIELNPFYRDAWFNKALALRILGRYEEA 61
Query: 178 AEQF 181
E F
Sbjct: 62 RECF 65
>sp|Q8CJ00|NOXA1_MOUSE NADPH oxidase activator 1 OS=Mus musculus GN=Noxa1 PE=1 SV=1
Length = 444
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 111 WDALTGGNNNSREAVVAI--RRGMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSL 168
WD+ ++ RE + + RG + GD ++ FD+A+ D QRG++
Sbjct: 23 WDSALCFFSDVREPLARMYFNRGCVHLMAGDPEAALRAFDQAVTKDTCMAVGFLQRGVAN 82
Query: 169 YYLDRFEEGAEQFRIDVAQ 187
+ L RF+E F++ +AQ
Sbjct: 83 FQLQRFQEAVSDFQLALAQ 101
>sp|Q9MAH1|TTL1_ARATH TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana
GN=TTL1 PE=1 SV=1
Length = 699
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 42/97 (43%)
Query: 129 RRGMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQN 188
R G ++R+G ++ +D+AI L P AY R +L L R E ++ V +
Sbjct: 232 RVGNEMYRKGLFNEALKLYDRAIALSPTNAAYRSNRAAALIGLSRIGEAVKECEDAVRSD 291
Query: 189 PNDTEESIWCFLCEAQLYGVDEARNRFLEVGRDPRPV 225
PN L +L V+ AR +GR P+
Sbjct: 292 PNYGRAHHRLALLLIRLGQVNSARKHLCFLGRPSDPM 328
>sp|F4IXE4|TTL2_ARATH TPR repeat-containing thioredoxin TTL2 OS=Arabidopsis thaliana
GN=TTL2 PE=2 SV=2
Length = 730
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 129 RRGMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQN 188
R G +FR+G ++ +D+AIEL P Y R +L L + E + I + +
Sbjct: 263 RFGNEMFRKGCFAEALKLYDRAIELSPSNATYHSNRAAALSSLGQIGEAVNECEIAIKLD 322
Query: 189 PN 190
PN
Sbjct: 323 PN 324
>sp|Q84JR9|TTL4_ARATH TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis thaliana
GN=TTL4 PE=2 SV=1
Length = 682
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 129 RRGMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQN 188
+ G +++R+G+ ++A +D+AI L P AY R +L R EE ++ V +
Sbjct: 216 KAGNVMYRKGNYAEALALYDRAISLSPENPAYRSNRAAALAASGRLEEAVKECLEAVRCD 275
Query: 189 PN 190
P+
Sbjct: 276 PS 277
>sp|Q9SAB1|HSP7Q_ARATH Heat shock 70 kDa protein 16 OS=Arabidopsis thaliana GN=HSP70-16
PE=2 SV=1
Length = 763
Score = 35.4 bits (80), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 26/183 (14%)
Query: 59 LYSFHRSLLTSKAPLSVQTHINSLFST----PRGHYLQNRAPTFTRRLFIPSVSGIWDAL 114
L +H+ +TS+ +S + H +S P + N P +R+ IP V+ + AL
Sbjct: 495 LIEYHKENITSEEMISEENHQSSAMKDGSLDPSSGSIGNE-PKAIKRMEIPVVANVSGAL 553
Query: 115 TGGNNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRF 174
T E A +R L Q + S + A+E +++++ + L+ +
Sbjct: 554 TKD-----ELSEAKQRENSLVEQDLKMESTKDKKNALE------SFVYE--MRDKMLNTY 600
Query: 175 EEGA-EQFRIDVAQNPNDTEESIWCFLCEAQLYGVDEARNRFLEVGRDPRPVMREAYNMF 233
A E R +A+N +TEE W + G DE+ N ++E D + ++ N F
Sbjct: 601 RNTATESERECIARNLQETEE--WLYE-----DGDDESENAYIEKLNDVKKLIDPIENRF 653
Query: 234 KGG 236
K G
Sbjct: 654 KDG 656
>sp|Q58741|Y1345_METJA TPR repeat-containing protein MJ1345 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1345 PE=4 SV=1
Length = 314
Score = 34.7 bits (78), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 37/71 (52%)
Query: 122 REAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQF 181
+ A+ +G +L+R+G + S+ FD A++++P+ L +G L+ L R+ E +
Sbjct: 145 KSAIAWAEKGEILYREGKLKKSLECFDNALKINPKDCQSLLYKGEILFKLGRYGEALKCL 204
Query: 182 RIDVAQNPNDT 192
+ +N D
Sbjct: 205 KKVFERNNKDI 215
>sp|Q5I0X7|TTC32_HUMAN Tetratricopeptide repeat protein 32 OS=Homo sapiens GN=TTC32 PE=2
SV=1
Length = 151
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 130 RGMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNP 189
RG + + + D ++ ++ AIE+ P + + RGL LY L F++ E F+ + NP
Sbjct: 64 RGQIKYFRVDFYEAMDDYTSAIEVQPNFEVPYYNRGLILYRLGYFDDALEDFKKVLDLNP 123
>sp|Q54DA8|STIP1_DICDI Protein STIP1 homolog OS=Dictyostelium discoideum GN=sti1 PE=3 SV=1
Length = 564
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 120 NSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEG 177
N+++A +G F D +V FD+AIELDP R SL LD+ E+
Sbjct: 4 NAQKATEFKNQGNAAFSSKDYNSAVKCFDQAIELDPSNHILYSNRSASLLALDKNEDA 61
>sp|Q8NBP0|TTC13_HUMAN Tetratricopeptide repeat protein 13 OS=Homo sapiens GN=TTC13 PE=2
SV=3
Length = 860
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%)
Query: 130 RGMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEG 177
RGM+L+ G + ++ F + ++L+P + + +GLS + +F EG
Sbjct: 357 RGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEG 404
>sp|P53043|PPT1_YEAST Serine/threonine-protein phosphatase T OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PPT1 PE=1 SV=1
Length = 513
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 38/83 (45%)
Query: 120 NSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAE 179
+S +++ R F+ + ++ + D+AI+LDP+ +R LS L F++ +
Sbjct: 42 DSTQSIYFSNRAFAHFKVDNFQSALNDCDEAIKLDPKNIKAYHRRALSCMALLEFKKARK 101
Query: 180 QFRIDVAQNPNDTEESIWCFLCE 202
+ + PND + C+
Sbjct: 102 DLNVLLKAKPNDPAATKALLTCD 124
>sp|O27283|FLPA_METTH Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase
OS=Methanothermobacter thermautotrophicus (strain ATCC
29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
GN=flpA PE=3 SV=1
Length = 224
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 168 LYYLDRFEEGAEQFRIDVAQNPNDTE---ESIWCFLCEAQLYGVDEARNRFLEVGRDPRP 224
L YL R E A+ DVAQ P+ T E++ CFL + YG+ + R ++V R PR
Sbjct: 130 LSYL-RMVEAADLVYCDVAQ-PDQTRLFIENMDCFL-KRDGYGLIMIKARSIDVTRSPRK 186
Query: 225 VMREAYNMFKGGG 237
+ RE + G
Sbjct: 187 IFREEVGKLESSG 199
>sp|Q28G25|BBS4_XENTR Bardet-Biedl syndrome 4 protein homolog OS=Xenopus tropicalis
GN=bbs4 PE=2 SV=1
Length = 516
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 102 LFIPSVSGIWDALTGGNNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPR 156
LF+ +S + LT R+ + AI G + ++GD+ G++ F +A++L P
Sbjct: 143 LFLKDLSKSKEQLTLALQLHRQDLSAITLGKIQLQEGDIDGAIQTFTQALQLSPE 197
>sp|B0BN85|SUGT1_RAT Suppressor of G2 allele of SKP1 homolog OS=Rattus norvegicus
GN=Sugt1 PE=2 SV=1
Length = 336
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 28/65 (43%)
Query: 138 GDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNPNDTEESIW 197
G +A+ K++EL+P L ++G+ YY + E F + DT IW
Sbjct: 59 GKYCDGIADVKKSLELNPNNSTALLRKGICEYYEKDYASALETFAEGQKLDGTDTNFDIW 118
Query: 198 CFLCE 202
C+
Sbjct: 119 IKRCQ 123
>sp|A7E3N7|NOXA1_RAT NADPH oxidase activator 1 OS=Rattus norvegicus GN=Noxa1 PE=2 SV=1
Length = 446
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 111 WDALTGGNNNSREAVVAI--RRGMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSL 168
WD+ ++ RE + + G + GD ++ FD+A+ D QRG++
Sbjct: 23 WDSALCFFSDVREPLAKMYFNMGCVHLMAGDPEAALRAFDQAVTKDTCMAVGFLQRGVAN 82
Query: 169 YYLDRFEEGAEQFRIDVAQ 187
+ L R +E F++ +AQ
Sbjct: 83 FQLQRLQEAVSDFQLALAQ 101
>sp|Q3A825|NUBCD_PELCD NADH-quinone oxidoreductase subunit B/C/D OS=Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1) GN=nuoBCD PE=3
SV=1
Length = 794
Score = 32.0 bits (71), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 69 SKAPLSVQTHINSLFSTPRGHYLQNRAPTFTRRLFIPSVSGIWDALTGGNNNSREA 124
S+ P T + L S R YL+ +AP R +PS++G+W A N REA
Sbjct: 288 SQRPAHDLTMVYHLLSFERAGYLRVKAPLRNDRAEVPSITGLWPA---ANWYEREA 340
>sp|O70593|SGTA_RAT Small glutamine-rich tetratricopeptide repeat-containing protein
alpha OS=Rattus norvegicus GN=Sgta PE=1 SV=1
Length = 314
Score = 32.0 bits (71), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 120 NSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAE 179
N AV R + G+ VG+V + ++AI +DP + GL+L L++ E
Sbjct: 121 NPANAVYFCNRAAAYSKLGNYVGAVQDCERAIGIDPGYSKAYGRMGLALSSLNKHAEAVA 180
Query: 180 QFRIDVAQNP-NDTEES 195
++ + +P NDT +S
Sbjct: 181 YYKKALELDPDNDTYKS 197
>sp|Q8BJU0|SGTA_MOUSE Small glutamine-rich tetratricopeptide repeat-containing protein
alpha OS=Mus musculus GN=Sgta PE=1 SV=2
Length = 315
Score = 32.0 bits (71), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 120 NSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAE 179
N AV R + G+ VG+V + ++AI +DP + GL+L L++ E
Sbjct: 122 NPANAVYFCNRAAAYSKLGNYVGAVQDCERAIGIDPGYSKAYGRMGLALSSLNKHAEAVA 181
Query: 180 QFRIDVAQNP-NDTEES 195
++ + +P NDT +S
Sbjct: 182 YYKKALELDPDNDTYKS 198
>sp|Q9CX34|SUGT1_MOUSE Suppressor of G2 allele of SKP1 homolog OS=Mus musculus GN=Sugt1
PE=2 SV=3
Length = 336
Score = 31.6 bits (70), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 138 GDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNPNDTEESIW 197
GD ++ E KA+E +P Y QR L ++ +G + + NPN+ +
Sbjct: 25 GDPQAALEELTKALEQNPDDAQYYCQRAYCHILLGKYRDGIADVKKSLELNPNNCTALLR 84
Query: 198 CFLCE 202
+CE
Sbjct: 85 KGICE 89
>sp|Q9CZW5|TOM70_MOUSE Mitochondrial import receptor subunit TOM70 OS=Mus musculus
GN=Tomm70a PE=1 SV=2
Length = 611
Score = 31.6 bits (70), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 128 IRRGMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQF 181
I+RG + +Q + S +F+ A E+DP RG LD EE F
Sbjct: 374 IKRGTMCMQQQQPMLSTQDFNMAAEIDPMNSDVYHHRGQLKILLDLVEEAVADF 427
>sp|Q54IP0|DNJC7_DICDI DnaJ homolog subfamily C member 7 homolog OS=Dictyostelium
discoideum GN=dnajc7 PE=1 SV=1
Length = 539
Score = 31.6 bits (70), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 151 IELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRIDVAQNPNDTEESI 196
++ D R YL+ RGLSLYY + F + F+ + +P+ +E +
Sbjct: 182 LQEDSRNPEYLYVRGLSLYYQNNFPLALQHFQNSLTYDPDYSESRV 227
>sp|Q75Q39|TOM70_RAT Mitochondrial import receptor subunit TOM70 OS=Rattus norvegicus
GN=Tomm70a PE=1 SV=1
Length = 610
Score = 31.6 bits (70), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 128 IRRGMLLFRQGDVVGSVAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQF 181
I+RG + +Q + S +F+ A E+DP RG LD EE F
Sbjct: 373 IKRGTMCMQQQQPMLSTQDFNMAAEIDPMNSDVYHHRGQLKILLDLVEEAVADF 426
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,854,445
Number of Sequences: 539616
Number of extensions: 4937668
Number of successful extensions: 10052
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 9974
Number of HSP's gapped (non-prelim): 74
length of query: 310
length of database: 191,569,459
effective HSP length: 117
effective length of query: 193
effective length of database: 128,434,387
effective search space: 24787836691
effective search space used: 24787836691
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)