BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021613
(310 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P14671|TRPB1_ARATH Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis
thaliana GN=TSB1 PE=2 SV=1
Length = 470
Score = 437 bits (1124), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/277 (78%), Positives = 233/277 (84%), Gaps = 11/277 (3%)
Query: 26 QSPFKLKKFTASPAKSTSIR-----CTIARDPVVPMEAKKESDPAPWQRPDVFGRFGRFG 80
+SPFK K+T P+ + CTIA+DP V M A SDPA WQRPD FGRFG+FG
Sbjct: 28 KSPFKAVKYTPLPSSRSKSSSFSVSCTIAKDPPVLMAAG--SDPALWQRPDSFGRFGKFG 85
Query: 81 GKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRRPN 140
GK+VPETLM+ALSELESA + LA D DFQ EL+GIL+DYVGRE+PLYFAERLTEHYRR N
Sbjct: 86 GKYVPETLMHALSELESAFYALATDDDFQRELAGILKDYVGRESPLYFAERLTEHYRREN 145
Query: 141 GGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQHGVATATVCARFG 200
G GP IYLKREDLNHTGAHKINNAV QALLAKRLGK RIIAETGAGQHGVATATVCARFG
Sbjct: 146 GEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFG 205
Query: 201 LQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYI 260
L+CI+YMGAQDMERQALNVFRMRLLGAEVR VHSGTATLKDATSEAIRDWVTNVETTHYI
Sbjct: 206 LECIIYMGAQDMERQALNVFRMRLLGAEVRGVHSGTATLKDATSEAIRDWVTNVETTHYI 265
Query: 261 LGSVAGPHPYPMMVRDFHATSIGEMGWETRCADCMRW 297
LGSVAGPHPYPMMVRDFHA +G ETR +W
Sbjct: 266 LGSVAGPHPYPMMVRDFHAV----IGKETRKQALEKW 298
>sp|P25269|TRBP2_ARATH Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis
thaliana GN=TSB2 PE=2 SV=2
Length = 475
Score = 434 bits (1115), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/305 (71%), Positives = 241/305 (79%), Gaps = 18/305 (5%)
Query: 7 SSSCCKLAKPCAFTTSNSS---QSPFKLKKFTASPAKSTSIR------CTIARDPVVPME 57
++S +P + + S+ +SP KL KFT P+ + CTIA+DP V M
Sbjct: 3 TASTAATFRPSSVSASSELTHLRSPSKLPKFTPLPSARSRSSSSFSVSCTIAKDPAVVMA 62
Query: 58 AKKE-----SDPAPWQRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEEL 112
++ SDP WQRPD FGRFG+FGGK+VPETLM+ALSELE+A + LA D DFQ EL
Sbjct: 63 DSEKIKAAGSDPTMWQRPDSFGRFGKFGGKYVPETLMHALSELETAFYSLATDEDFQREL 122
Query: 113 SGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAK 172
+ IL+DYVGRE+PLYFAERLTEHYRR NG GP IYLKREDLNHTGAHKINNAV QALLAK
Sbjct: 123 AEILKDYVGRESPLYFAERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQALLAK 182
Query: 173 RLGKTRIIAETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAV 232
RLGK RIIAETGAGQHGVATATVCARFGLQCI+YMGAQDMERQALNVFRMRLLGAEVR V
Sbjct: 183 RLGKKRIIAETGAGQHGVATATVCARFGLQCIIYMGAQDMERQALNVFRMRLLGAEVRGV 242
Query: 233 HSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRCA 292
HSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHA +G ETR
Sbjct: 243 HSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAV----IGKETRKQ 298
Query: 293 DCMRW 297
+W
Sbjct: 299 AMEKW 303
>sp|O50046|TRPB_CAMAC Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca
acuminata GN=TSB PE=2 SV=1
Length = 466
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/279 (75%), Positives = 232/279 (83%), Gaps = 11/279 (3%)
Query: 22 SNSSQSPFKLKKFT--ASPAKSTSIRCTIARDPVVPMEAKK-ESDPAPWQRPDVFGRFGR 78
SN S+ F L KF S K SI CTIAR+ ME ++ E +P QRPD FGRFG+
Sbjct: 24 SNPSRFSFNLDKFRPRTSAIKVPSICCTIARE----MEKERSEREPDVLQRPDSFGRFGK 79
Query: 79 FGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHYRR 138
FGGK+VPETLMYAL+ELESA L+ D+ FQ+EL GIL+DYVGRE+PLYFAERLT HY+R
Sbjct: 80 FGGKYVPETLMYALTELESAFRSLSGDQVFQKELDGILKDYVGRESPLYFAERLTLHYKR 139
Query: 139 PNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQHGVATATVCAR 198
PNG GP IYLKREDLNHTGAHKINNAV QALLAKRLGK RIIAETGAGQHGVATATVCAR
Sbjct: 140 PNGEGPEIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCAR 199
Query: 199 FGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTH 258
FGLQC++YMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVE+TH
Sbjct: 200 FGLQCVIYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVESTH 259
Query: 259 YILGSVAGPHPYPMMVRDFHATSIGEMGWETRCADCMRW 297
YILGSVAGPHPYPMMVR+FHA +G ETR +W
Sbjct: 260 YILGSVAGPHPYPMMVREFHAV----IGKETRKQALEKW 294
>sp|P43284|TRPB2_MAIZE Tryptophan synthase beta chain 2, chloroplastic (Fragment) OS=Zea
mays GN=TSB2 PE=2 SV=1
Length = 443
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/231 (83%), Positives = 205/231 (88%), Gaps = 4/231 (1%)
Query: 67 WQRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPL 126
QRPD GRFGRFGGK+VPETLM+AL+ELESA H LA D +FQ+EL GIL+DYVGRE+PL
Sbjct: 45 LQRPDAMGRFGRFGGKYVPETLMHALTELESAFHALATDDEFQKELDGILKDYVGRESPL 104
Query: 127 YFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAG 186
YFAERLTEHY+R +G GP IYLKREDLNHTGAHKINNAV QALLAKRLGK RIIAETGAG
Sbjct: 105 YFAERLTEHYKRADGTGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKQRIIAETGAG 164
Query: 187 QHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEA 246
QHGVATATVC RFGLQCI+YMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEA
Sbjct: 165 QHGVATATVCRRFGLQCIIYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEA 224
Query: 247 IRDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRCADCMRW 297
IRDWVTNVETTHYILGSVAGPHPYPMMVR+FH +G ETR +W
Sbjct: 225 IRDWVTNVETTHYILGSVAGPHPYPMMVREFHKV----IGKETRRQAMDKW 271
>sp|P43283|TRPB1_MAIZE Tryptophan synthase beta chain 1 (Fragment) OS=Zea mays GN=TSB1
PE=2 SV=1
Length = 389
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/221 (82%), Positives = 198/221 (89%), Gaps = 4/221 (1%)
Query: 77 GRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTEHY 136
GRFGGK+VPETLM+AL+ELE+A H LA D +FQ+EL GIL+DYVGRE+PLYFAERLTEHY
Sbjct: 1 GRFGGKYVPETLMHALTELENAFHALATDDEFQKELDGILKDYVGRESPLYFAERLTEHY 60
Query: 137 RRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQHGVATATVC 196
+R +G GP IYLKREDLNH GAHKINNAV QALLAKRLGK RIIAETGAGQHGVATATVC
Sbjct: 61 KRADGTGPLIYLKREDLNHRGAHKINNAVAQALLAKRLGKQRIIAETGAGQHGVATATVC 120
Query: 197 ARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVET 256
ARFGLQCI+YMGAQDMERQALNVFRM+LLGAEVRAVHSGTATLKDATSEAIRDWVTNVET
Sbjct: 121 ARFGLQCIIYMGAQDMERQALNVFRMKLLGAEVRAVHSGTATLKDATSEAIRDWVTNVET 180
Query: 257 THYILGSVAGPHPYPMMVRDFHATSIGEMGWETRCADCMRW 297
THYILGSVAGPHPYPMMVR+FH +G ETR +W
Sbjct: 181 THYILGSVAGPHPYPMMVREFHKV----IGKETRRQAMHKW 217
>sp|Q3MBV3|TRPB_ANAVT Tryptophan synthase beta chain OS=Anabaena variabilis (strain ATCC
29413 / PCC 7937) GN=trpB PE=3 SV=1
Length = 413
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/249 (73%), Positives = 200/249 (80%), Gaps = 10/249 (4%)
Query: 62 SDPAPWQRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVG 121
S P+ Q PD+ GRFGRFGGK+VPETLM AL+ELE+A K D FQ EL +LRDYVG
Sbjct: 9 STPSNAQVPDIQGRFGRFGGKYVPETLMPALAELETAYQKYRHDPGFQAELQQLLRDYVG 68
Query: 122 RETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIA 181
R TPLYFAERLT HY RP+G G IYLKREDLNHTGAHKINNA+GQ LLAKR+GK RIIA
Sbjct: 69 RATPLYFAERLTAHYARPDGTGAQIYLKREDLNHTGAHKINNALGQVLLAKRMGKQRIIA 128
Query: 182 ETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKD 241
ETGAGQHGVATATVCARFGL+C++YMG DMERQALNVFRMRL+GAEVR V +GT TLKD
Sbjct: 129 ETGAGQHGVATATVCARFGLECVIYMGVHDMERQALNVFRMRLMGAEVRPVEAGTGTLKD 188
Query: 242 ATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRCADCMRWWWFK 301
ATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHA +G ETR +W
Sbjct: 189 ATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAV----IGQETRAQALEKW---- 240
Query: 302 CHGSLPRIC 310
G LP I
Sbjct: 241 --GGLPDIL 247
>sp|Q8YQM6|TRPB2_NOSS1 Tryptophan synthase beta chain 2 OS=Nostoc sp. (strain PCC 7120 /
UTEX 2576) GN=trpB2 PE=3 SV=1
Length = 413
Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/248 (73%), Positives = 201/248 (81%), Gaps = 10/248 (4%)
Query: 62 SDPAPWQRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVG 121
S P+ Q PD+ GRFGRFGGK+VPETLM AL+ELE+A + +D FQ EL +LRDYVG
Sbjct: 9 STPSNVQVPDIQGRFGRFGGKYVPETLMPALAELETAYQQYRNDPGFQAELQQLLRDYVG 68
Query: 122 RETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIA 181
R TPLYFAERLT HY RP+G G IYLKREDLNHTGAHKINNA+GQ LLAKR+GK RIIA
Sbjct: 69 RATPLYFAERLTAHYARPDGTGAQIYLKREDLNHTGAHKINNALGQVLLAKRMGKQRIIA 128
Query: 182 ETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKD 241
ETGAGQHGVATATVCARFGL+C++YMG DMERQALNVFRMRL+GAEVR V +GT TLKD
Sbjct: 129 ETGAGQHGVATATVCARFGLECVIYMGVHDMERQALNVFRMRLMGAEVRPVAAGTGTLKD 188
Query: 242 ATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRCADCMRWWWFK 301
ATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHA +G ETR +W
Sbjct: 189 ATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAV----IGQETRAQALEKW---- 240
Query: 302 CHGSLPRI 309
G LP I
Sbjct: 241 --GGLPDI 246
>sp|Q118P8|TRPB_TRIEI Tryptophan synthase beta chain OS=Trichodesmium erythraeum (strain
IMS101) GN=trpB PE=3 SV=1
Length = 409
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/236 (75%), Positives = 200/236 (84%), Gaps = 5/236 (2%)
Query: 63 DPAPWQRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGR 122
+P Q+PD GRFG+FGGK+VPETLM AL +LE+A K + D F++EL +LRDYVGR
Sbjct: 7 NPTSTQQPDSLGRFGKFGGKYVPETLMPALLQLETACKKYSQDPTFKQELQQLLRDYVGR 66
Query: 123 ETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAE 182
+PLYFAERLT HY +P+G GP IYLKREDLNHTGAHKINNA+GQALLA+R+GK RIIAE
Sbjct: 67 PSPLYFAERLTAHYTKPDGTGPQIYLKREDLNHTGAHKINNALGQALLAQRMGKQRIIAE 126
Query: 183 TGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDA 242
TGAGQHGVATATVCARFGL+C++YMG DMERQALNVFRMRL+GAEVR V +GT TLKDA
Sbjct: 127 TGAGQHGVATATVCARFGLKCVIYMGIHDMERQALNVFRMRLMGAEVRPVEAGTGTLKDA 186
Query: 243 TSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRCADCMRWW 298
TSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHA +G ETR A C+ W
Sbjct: 187 TSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAV----IGVETR-AQCLEKW 237
>sp|Q8YZP7|TRPB1_NOSS1 Tryptophan synthase beta chain 1 OS=Nostoc sp. (strain PCC 7120 /
UTEX 2576) GN=trpB1 PE=3 SV=1
Length = 409
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/241 (73%), Positives = 195/241 (80%), Gaps = 10/241 (4%)
Query: 69 RPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYF 128
RPD GRFG+FGGK+VPETLM AL ELE+A K DD +Q EL +LRDYVGR +PLYF
Sbjct: 13 RPDALGRFGKFGGKYVPETLMPALGELETAYQKYRDDASYQTELQNLLRDYVGRPSPLYF 72
Query: 129 AERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQH 188
AERLTE+Y RP+G G IYLKREDLNHTGAHKINNA+ Q LLAKR+GK R+IAETGAGQH
Sbjct: 73 AERLTEYYARPDGTGAQIYLKREDLNHTGAHKINNALAQVLLAKRIGKQRVIAETGAGQH 132
Query: 189 GVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIR 248
GVATATVCARFGL C++YMG DMERQALNVFRM+L+GAEVR V +GT TLKDATSEAIR
Sbjct: 133 GVATATVCARFGLDCVIYMGIHDMERQALNVFRMKLMGAEVRPVEAGTGTLKDATSEAIR 192
Query: 249 DWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRCADCMRWWWFKCHGSLPR 308
DWVTNVETTHYILGSVAGPHPYPM+VRDFHA +G ETR C W G LP
Sbjct: 193 DWVTNVETTHYILGSVAGPHPYPMIVRDFHAI----IGKETRV-QCQEKW-----GGLPD 242
Query: 309 I 309
I
Sbjct: 243 I 243
>sp|Q59992|TRPB_SYNY3 Tryptophan synthase beta chain OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=trpB PE=3 SV=1
Length = 412
Score = 362 bits (930), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 175/243 (72%), Positives = 195/243 (80%), Gaps = 10/243 (4%)
Query: 68 QRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLY 127
Q PD GRFG +GGK+VPETLM AL+ELE A ++ + FQEEL+G+L+DYVGR +PLY
Sbjct: 13 QYPDALGRFGNYGGKYVPETLMPALTELEEAYYRYRAESSFQEELAGLLKDYVGRSSPLY 72
Query: 128 FAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQ 187
FAERL+ HY RP+G P IYLKREDLNHTGAHKINNA+GQ LLAKR+GK RIIAETGAGQ
Sbjct: 73 FAERLSAHYARPDGTYPLIYLKREDLNHTGAHKINNALGQVLLAKRMGKKRIIAETGAGQ 132
Query: 188 HGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAI 247
HGVATATVCARFGL+CI+YMG QDMERQ LNVFRM LLGA V+ V +GT TLKDATSEAI
Sbjct: 133 HGVATATVCARFGLECIIYMGVQDMERQKLNVFRMNLLGARVQPVTAGTGTLKDATSEAI 192
Query: 248 RDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRCADCMRWWWFKCHGSLP 307
RDWVTNVETTHYILGSVAGPHPYPMMVRDFH +G ETR +W G LP
Sbjct: 193 RDWVTNVETTHYILGSVAGPHPYPMMVRDFHRV----IGQETRQQALKKW------GGLP 242
Query: 308 RIC 310
I
Sbjct: 243 DIL 245
>sp|Q8DG49|TRPB_THEEB Tryptophan synthase beta chain OS=Thermosynechococcus elongatus
(strain BP-1) GN=trpB PE=3 SV=1
Length = 410
Score = 352 bits (902), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 177/241 (73%), Positives = 192/241 (79%), Gaps = 11/241 (4%)
Query: 69 RPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYF 128
RPD GRFGRFGGK+VPETLM ALSELE+A D DFQ EL +LRDYVGR +PLYF
Sbjct: 14 RPDARGRFGRFGGKYVPETLMPALSELEAAFAHYRQDPDFQAELQQLLRDYVGRPSPLYF 73
Query: 129 AERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQH 188
AERL+ HY + P IYLKREDLNHTGAHKINNA+GQ LLAKR+GK RIIAETGAGQH
Sbjct: 74 AERLSAHYAH-DQVQPQIYLKREDLNHTGAHKINNALGQVLLAKRMGKQRIIAETGAGQH 132
Query: 189 GVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIR 248
GVATATVCARFGLQC++YMG QDMERQ LNV RMRLLGAEV V +GT TLKDATSEAIR
Sbjct: 133 GVATATVCARFGLQCVIYMGVQDMERQRLNVLRMRLLGAEVAPVSAGTGTLKDATSEAIR 192
Query: 249 DWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRCADCMRWWWFKCHGSLPR 308
DWVTNVETTHYILGSVAGPHPYPM+VR+FHA +G ETR C+ W G LP
Sbjct: 193 DWVTNVETTHYILGSVAGPHPYPMLVREFHAV----IGAETR-QQCLEKW-----GGLPD 242
Query: 309 I 309
I
Sbjct: 243 I 243
>sp|A2BZZ2|TRPB_PROM1 Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain
NATL1A) GN=trpB PE=3 SV=1
Length = 417
Score = 347 bits (891), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 168/225 (74%), Positives = 189/225 (84%), Gaps = 1/225 (0%)
Query: 60 KESDPAPWQRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDY 119
K+SD +P RP+ GRFG++GG++VPETL+ AL ELE A + D F EL+ +L+ Y
Sbjct: 10 KDSDLSPLTRPNALGRFGKYGGQYVPETLIPALIELEQAAKEAWKDSSFNSELNHLLKTY 69
Query: 120 VGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRI 179
VGR TPLY A RLTEHYR+ GP I+LKREDLNHTGAHKINNA+GQALLA R+GK RI
Sbjct: 70 VGRSTPLYEATRLTEHYRKNTLKGPRIWLKREDLNHTGAHKINNALGQALLAIRMGKKRI 129
Query: 180 IAETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATL 239
IAETGAGQHGVATATVCARFGL+CI+YMG +DM RQALNVFRM+LLGA VR V SGTATL
Sbjct: 130 IAETGAGQHGVATATVCARFGLECIIYMGKEDMRRQALNVFRMQLLGASVRPVTSGTATL 189
Query: 240 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGE 284
KDATSEAIRDWVTNVETTHYILGSVAGPHPYPM+VRDFHA IGE
Sbjct: 190 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMLVRDFHAV-IGE 233
>sp|Q46HK9|TRPB_PROMT Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain
NATL2A) GN=trpB PE=3 SV=1
Length = 417
Score = 347 bits (891), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 168/225 (74%), Positives = 189/225 (84%), Gaps = 1/225 (0%)
Query: 60 KESDPAPWQRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDY 119
K+SD +P RP+ GRFG++GG++VPETL+ AL ELE A + D F EL+ +L+ Y
Sbjct: 10 KDSDLSPLTRPNTLGRFGKYGGQYVPETLIPALIELEQAAKEAWKDSSFNSELNHLLKTY 69
Query: 120 VGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRI 179
VGR TPLY A RLTEHYR+ GP I+LKREDLNHTGAHKINNA+GQALLA R+GK RI
Sbjct: 70 VGRSTPLYEATRLTEHYRKNTLKGPRIWLKREDLNHTGAHKINNALGQALLAIRMGKKRI 129
Query: 180 IAETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATL 239
IAETGAGQHGVATATVCARFGL+CI+YMG +DM RQALNVFRM+LLGA VR V SGTATL
Sbjct: 130 IAETGAGQHGVATATVCARFGLECIIYMGKEDMRRQALNVFRMQLLGASVRPVTSGTATL 189
Query: 240 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGE 284
KDATSEAIRDWVTNVETTHYILGSVAGPHPYPM+VRDFHA IGE
Sbjct: 190 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMLVRDFHAV-IGE 233
>sp|A9BD24|TRPB_PROM4 Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain
MIT 9211) GN=trpB PE=3 SV=1
Length = 416
Score = 337 bits (865), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 164/225 (72%), Positives = 190/225 (84%), Gaps = 2/225 (0%)
Query: 60 KESDPAPWQRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDY 119
K+ + A RP V GRFGRFGG++VPETLM AL+ELE + D F ELS +L+ Y
Sbjct: 10 KDMELANSSRPSVHGRFGRFGGQYVPETLMPALAELEKKAAEAWQDSSFTNELSHLLKTY 69
Query: 120 VGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRI 179
VGR TPLY A+RL++HY GG P I+LKREDLNHTGAHKINNA+GQALLA R+GK RI
Sbjct: 70 VGRATPLYEAKRLSQHYMSREGG-PRIWLKREDLNHTGAHKINNALGQALLAIRMGKKRI 128
Query: 180 IAETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATL 239
IAETGAGQHGVATATVCARFGL+C++YMG +DMERQALNVFRM+LLGA+V++V +GTATL
Sbjct: 129 IAETGAGQHGVATATVCARFGLECVIYMGQEDMERQALNVFRMKLLGAKVQSVTAGTATL 188
Query: 240 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGE 284
KDATSEAIRDWVTNVE+THYILGSVAGPHPYPM+VRDFH+ IGE
Sbjct: 189 KDATSEAIRDWVTNVESTHYILGSVAGPHPYPMLVRDFHSV-IGE 232
>sp|Q7VE26|TRPB_PROMA Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain
SARG / CCMP1375 / SS120) GN=trpB PE=3 SV=1
Length = 416
Score = 335 bits (859), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 165/225 (73%), Positives = 187/225 (83%), Gaps = 2/225 (0%)
Query: 60 KESDPAPWQRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDY 119
++ D RP GRFGRFGG++VPETL+ AL+ELE A D F +EL+ +L+ Y
Sbjct: 10 QDPDLVLSARPSAHGRFGRFGGQYVPETLIPALTELEQAAATAWKDESFTKELTQLLKTY 69
Query: 120 VGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRI 179
VGRETPLY A RLT+HY R G P I+LKREDLNHTGAHKINNA+GQALLA R+GK RI
Sbjct: 70 VGRETPLYEATRLTKHYERGTVG-PRIWLKREDLNHTGAHKINNALGQALLAIRMGKKRI 128
Query: 180 IAETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATL 239
IAETGAGQHGVATATVCARFGL+CI+YMG +DM RQ+LNVFRM+LLGA+VR V +GTATL
Sbjct: 129 IAETGAGQHGVATATVCARFGLECIIYMGQEDMRRQSLNVFRMKLLGAKVRPVTAGTATL 188
Query: 240 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGE 284
KDATSEAIRDWVTNVETTHYILGSVAGPHPYPM+VRDFHA IGE
Sbjct: 189 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMLVRDFHAV-IGE 232
>sp|A2BNV9|TRPB_PROMS Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain
AS9601) GN=trpB PE=3 SV=1
Length = 414
Score = 334 bits (857), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 166/242 (68%), Positives = 197/242 (81%), Gaps = 11/242 (4%)
Query: 68 QRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLY 127
+P + GRFG++GG++VPETLM AL ELE A D+ F EEL+ +L+ YVGRETPLY
Sbjct: 18 NQPSIEGRFGKYGGQYVPETLMPALFELEDAASNAWKDKLFVEELNHLLKTYVGRETPLY 77
Query: 128 FAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQ 187
A+RLTEHY+ P I+LKREDLNHTGAHKINNA+GQALLA R+GK RIIAETGAGQ
Sbjct: 78 EAKRLTEHYKNKQAT-PRIWLKREDLNHTGAHKINNALGQALLAIRMGKKRIIAETGAGQ 136
Query: 188 HGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAI 247
HGVATATVCARFGL+CI+YMGA+D++RQ+LNVFRM+LLGAEV+ V+SGTATLKDATSEAI
Sbjct: 137 HGVATATVCARFGLKCIIYMGAEDIKRQSLNVFRMKLLGAEVKVVNSGTATLKDATSEAI 196
Query: 248 RDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRCADCMRWWWFKCHGSLP 307
RDWV+NVETTHYILGSVAGPHP+P +VRDFHA +G ET+ C+ + GSLP
Sbjct: 197 RDWVSNVETTHYILGSVAGPHPFPKIVRDFHAV----IGEETK-KQCLESF-----GSLP 246
Query: 308 RI 309
I
Sbjct: 247 DI 248
>sp|Q3AW11|TRPB_SYNS9 Tryptophan synthase beta chain OS=Synechococcus sp. (strain CC9902)
GN=trpB PE=3 SV=1
Length = 418
Score = 333 bits (854), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 167/227 (73%), Positives = 188/227 (82%), Gaps = 5/227 (2%)
Query: 61 ESDPA---PWQRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILR 117
+ DP+ P RP GRFGRFGG++VPETLM AL+ELE + + D F L+ +L+
Sbjct: 10 QPDPSSLQPSARPGAHGRFGRFGGQYVPETLMPALAELEQSAAQAWADPAFTGRLNHLLK 69
Query: 118 DYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKT 177
YVGR TPLY AERLT HYRR +GG P I+LKREDLNHTGAHKINNA+GQALLA R+GK
Sbjct: 70 TYVGRATPLYEAERLTAHYRRDDGG-PRIWLKREDLNHTGAHKINNALGQALLALRMGKK 128
Query: 178 RIIAETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTA 237
RIIAETGAGQHGVATATVCARFGL C++YMGA+DM RQALNVFRMRLLGA V V +G+A
Sbjct: 129 RIIAETGAGQHGVATATVCARFGLDCVIYMGAEDMRRQALNVFRMRLLGATVAPVTAGSA 188
Query: 238 TLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGE 284
TLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPM+VRDFHA IG+
Sbjct: 189 TLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMLVRDFHAV-IGQ 234
>sp|A3PAN2|TRPB_PROM0 Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain
MIT 9301) GN=trpB PE=3 SV=1
Length = 414
Score = 331 bits (848), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 165/242 (68%), Positives = 196/242 (80%), Gaps = 11/242 (4%)
Query: 68 QRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLY 127
+P GRFG++GG++VPETLM AL ELE+A D+ F EEL+ +L+ YVGRETPLY
Sbjct: 18 NQPSKEGRFGKYGGQYVPETLMPALFELETAASNAWKDKLFVEELNHLLKTYVGRETPLY 77
Query: 128 FAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQ 187
A+RLTEHY+ P I+LKREDLNHTGAHKINNA+GQALLA R+GK RIIAETGAGQ
Sbjct: 78 EAKRLTEHYKTKQAT-PRIWLKREDLNHTGAHKINNALGQALLAIRMGKKRIIAETGAGQ 136
Query: 188 HGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAI 247
HGVATATVCARFGL+CI+YMGA+D++RQ+LNVFRM+LLGAEV+ V+SGTATLKDATSEAI
Sbjct: 137 HGVATATVCARFGLKCIIYMGAEDIKRQSLNVFRMKLLGAEVKVVNSGTATLKDATSEAI 196
Query: 248 RDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRCADCMRWWWFKCHGSLP 307
RDWV+NVETTHYILGSVAGPHP+P +VRDFHA +G ET+ C+ + GS P
Sbjct: 197 RDWVSNVETTHYILGSVAGPHPFPKIVRDFHAV----IGEETK-KQCLESF-----GSFP 246
Query: 308 RI 309
I
Sbjct: 247 DI 248
>sp|Q3AGY2|TRPB_SYNSC Tryptophan synthase beta chain OS=Synechococcus sp. (strain CC9605)
GN=trpB PE=3 SV=1
Length = 418
Score = 330 bits (847), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 171/225 (76%), Positives = 193/225 (85%), Gaps = 5/225 (2%)
Query: 63 DPAPWQ---RPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDY 119
DP+ Q RP GRFGRFGG++VPETLM AL+ELE A + +D F +EL+ +L++Y
Sbjct: 12 DPSSLQPAVRPGAHGRFGRFGGQYVPETLMPALAELEQAAAQAWNDPAFTDELNRLLKNY 71
Query: 120 VGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRI 179
VGR TPLY AERLT HYRR +GG P I+LKREDLNHTGAHKINNA+GQALLA R+GK RI
Sbjct: 72 VGRATPLYEAERLTAHYRRADGG-PRIWLKREDLNHTGAHKINNALGQALLALRMGKKRI 130
Query: 180 IAETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATL 239
IAETGAGQHGVATATVCARFGL+C++YMGA+DM RQALNVFRMRLLGA V+ V +GTATL
Sbjct: 131 IAETGAGQHGVATATVCARFGLECVIYMGAEDMRRQALNVFRMRLLGATVQPVTAGTATL 190
Query: 240 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGE 284
KDATSEAIRDWVTNVETTHYILGSVAGPHPYPM+VRDFHA IGE
Sbjct: 191 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMLVRDFHAV-IGE 234
>sp|Q7TUH0|TRPB_PROMP Tryptophan synthase beta chain OS=Prochlorococcus marinus subsp.
pastoris (strain CCMP1986 / MED4) GN=trpB PE=3 SV=1
Length = 414
Score = 330 bits (847), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 167/257 (64%), Positives = 199/257 (77%), Gaps = 11/257 (4%)
Query: 53 VVPMEAKKESDPAPWQRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEEL 112
V + + +++ +P GRFG++GG++VPETLM AL ELE A D+ F EL
Sbjct: 2 VSTISRQDQNNNDDLNQPSKEGRFGKYGGQYVPETLMPALFELEEAASDAWKDKQFVNEL 61
Query: 113 SGILRDYVGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAK 172
+ +L+ YVGRETPLY A+RLTEHY+ I+LKREDLNHTGAHKINNA+GQALLA
Sbjct: 62 NHLLKTYVGRETPLYEAKRLTEHYQTKTST-SRIWLKREDLNHTGAHKINNALGQALLAI 120
Query: 173 RLGKTRIIAETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAV 232
R+GK RIIAETGAGQHGVATATVCARFGLQCI+YMGA+D++RQ+LNVFRM+LLGAEV+ V
Sbjct: 121 RMGKQRIIAETGAGQHGVATATVCARFGLQCIIYMGAEDIKRQSLNVFRMKLLGAEVKVV 180
Query: 233 HSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRCA 292
SGTATLKDATSEAIRDWV+NVETTHYILGSVAGPHP+PM+VRDFHA IGE + +C
Sbjct: 181 TSGTATLKDATSEAIRDWVSNVETTHYILGSVAGPHPFPMIVRDFHAV-IGEEA-KKQC- 237
Query: 293 DCMRWWWFKCHGSLPRI 309
+ GSLP I
Sbjct: 238 -------LESFGSLPDI 247
>sp|Q2JLD7|TRPB_SYNJB Tryptophan synthase beta chain OS=Synechococcus sp. (strain
JA-2-3B'a(2-13)) GN=trpB PE=3 SV=1
Length = 425
Score = 330 bits (846), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 170/249 (68%), Positives = 189/249 (75%), Gaps = 16/249 (6%)
Query: 63 DPA-PWQRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVG 121
DP P RPD GRFG FGG+FVPETLM AL+ELE A D DF+ E +LRD+VG
Sbjct: 14 DPLDPQVRPDPQGRFGPFGGRFVPETLMSALTELEEAFEHHWRDPDFRAEFHNLLRDFVG 73
Query: 122 RETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIA 181
R +PLYFA+RLTE+Y GGP IYLKREDLNHTGAHKINNA+GQ LLA R+GK RIIA
Sbjct: 74 RPSPLYFAQRLTEYY-----GGPQIYLKREDLNHTGAHKINNALGQVLLAVRMGKRRIIA 128
Query: 182 ETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKD 241
ETGAGQHGVATATVCARFGL+C++YMGA DMERQA NV RMRLLGAEVR V SGT TLKD
Sbjct: 129 ETGAGQHGVATATVCARFGLECVIYMGALDMERQAPNVQRMRLLGAEVRGVESGTRTLKD 188
Query: 242 ATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRCADCMRWWWFK 301
A SEAIRDWVTNVETTHY++G+VAGPHPYP +VR FH +G ETR C W
Sbjct: 189 ALSEAIRDWVTNVETTHYVIGTVAGPHPYPKLVRAFHDV----IGQETR-QQCQEKW--- 240
Query: 302 CHGSLPRIC 310
G LP +
Sbjct: 241 --GGLPDVL 247
>sp|A5GP60|TRPB_SYNPW Tryptophan synthase beta chain OS=Synechococcus sp. (strain WH7803)
GN=trpB PE=3 SV=1
Length = 416
Score = 330 bits (845), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/229 (75%), Positives = 191/229 (83%), Gaps = 5/229 (2%)
Query: 62 SDPAPWQRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVG 121
SD A RP GRFGR+GG++VPETLM AL+ELE A + D F EL+ +L+ YVG
Sbjct: 12 SDLAVSSRPAAAGRFGRYGGQYVPETLMPALAELEQAAAQAWKDPAFTAELNRLLKSYVG 71
Query: 122 RETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIA 181
R TPLY AERLTEHYRR +GG P I+LKREDLNHTGAHKINNA+GQALLA R+GK R+IA
Sbjct: 72 RATPLYEAERLTEHYRRADGG-PRIWLKREDLNHTGAHKINNALGQALLALRMGKKRVIA 130
Query: 182 ETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKD 241
ETGAGQHGVATATVCARFGL+C+VYMGA+DM RQALNVFRMRLLGA V V +GTATLKD
Sbjct: 131 ETGAGQHGVATATVCARFGLECVVYMGAEDMRRQALNVFRMRLLGATVHPVTAGTATLKD 190
Query: 242 ATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETR 290
ATSEAIRDWVTNVETTHYILGSVAGPHPYPM+VRDFHA +G ETR
Sbjct: 191 ATSEAIRDWVTNVETTHYILGSVAGPHPYPMLVRDFHAV----IGQETR 235
>sp|Q7TTS6|TRPB_SYNPX Tryptophan synthase beta chain OS=Synechococcus sp. (strain WH8102)
GN=trpB PE=3 SV=1
Length = 418
Score = 328 bits (842), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/231 (74%), Positives = 193/231 (83%), Gaps = 8/231 (3%)
Query: 63 DPAPWQ---RPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDY 119
DPA Q RP GRFGRFGG++VPETLM AL+ELE A + +D F EL+ +L++Y
Sbjct: 12 DPASLQPSVRPGAHGRFGRFGGQYVPETLMPALAELEQAAAQAWNDPAFTAELNQLLKNY 71
Query: 120 VGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRI 179
VGR TPLY AERLT HYRR +GG P I+LKREDLNHTGAHKINNA+GQALLA R+GK RI
Sbjct: 72 VGRATPLYEAERLTAHYRRADGG-PRIWLKREDLNHTGAHKINNALGQALLALRMGKKRI 130
Query: 180 IAETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATL 239
IAETGAGQHGVATATVCARFGL+C++YMGA+DM RQALNVFRMRLLGA V+ V +GTATL
Sbjct: 131 IAETGAGQHGVATATVCARFGLECVIYMGAEDMRRQALNVFRMRLLGATVQPVTAGTATL 190
Query: 240 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETR 290
KDATSEAIRDWVTNVE+THYILGSVAGPHPYPM+VRDFHA +G E R
Sbjct: 191 KDATSEAIRDWVTNVESTHYILGSVAGPHPYPMLVRDFHAV----IGQEAR 237
>sp|Q0I6V1|TRPB_SYNS3 Tryptophan synthase beta chain OS=Synechococcus sp. (strain CC9311)
GN=trpB PE=3 SV=1
Length = 418
Score = 328 bits (841), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 168/221 (76%), Positives = 189/221 (85%), Gaps = 4/221 (1%)
Query: 63 DPA---PWQRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDY 119
DPA P RP+ GR+GR+GG++VPETLM AL+ELE A + D F EL+ +L+ Y
Sbjct: 12 DPASLMPSVRPEAHGRYGRYGGQYVPETLMPALAELEQAAAEAWKDSAFTTELNRLLKSY 71
Query: 120 VGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRI 179
VGR TPLY AERL+ HYRR +GG P I+LKREDLNHTGAHKINNA+GQALLA R+GK RI
Sbjct: 72 VGRATPLYEAERLSAHYRRSDGG-PRIWLKREDLNHTGAHKINNALGQALLALRMGKKRI 130
Query: 180 IAETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATL 239
IAETGAGQHGVATATVCARFGL+C+VYMGA+DM RQALNVFRMRLLGA V+AV +GTATL
Sbjct: 131 IAETGAGQHGVATATVCARFGLECVVYMGAEDMRRQALNVFRMRLLGATVQAVTAGTATL 190
Query: 240 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAT 280
KDATSEAIRDWVTNVETTHYILGSVAGPHPYPM+VRDFHA
Sbjct: 191 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMLVRDFHAV 231
>sp|A2BUE1|TRPB_PROM5 Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain
MIT 9515) GN=trpB PE=3 SV=1
Length = 414
Score = 327 bits (839), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 165/242 (68%), Positives = 194/242 (80%), Gaps = 11/242 (4%)
Query: 68 QRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLY 127
+P GRFG++GG++VPETLM AL ELE A D+ F +EL+ +L+ YVGRETPLY
Sbjct: 18 NQPSKEGRFGKYGGQYVPETLMPALFELEKAASDAWKDKQFVDELNHLLKTYVGRETPLY 77
Query: 128 FAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQ 187
A+RLTEHY+ I+LKREDLNHTGAHKINNA+GQALLA R+GK RIIAETGAGQ
Sbjct: 78 EAKRLTEHYQTKTCT-SRIWLKREDLNHTGAHKINNALGQALLAIRMGKERIIAETGAGQ 136
Query: 188 HGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAI 247
HGVATATVCARFGL+CI+YMGA+D++RQ+LNVFRM+LLGAEV+ V SGTATLKDATSEAI
Sbjct: 137 HGVATATVCARFGLKCIIYMGAEDIKRQSLNVFRMKLLGAEVKVVTSGTATLKDATSEAI 196
Query: 248 RDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRCADCMRWWWFKCHGSLP 307
RDWV+NVETTHYILGSVAGPHP+PM+VRDFHA IGE + +C + GSLP
Sbjct: 197 RDWVSNVETTHYILGSVAGPHPFPMIVRDFHAV-IGEEA-KKQCVESF--------GSLP 246
Query: 308 RI 309
I
Sbjct: 247 DI 248
>sp|A8G2H0|TRPB_PROM2 Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain
MIT 9215) GN=trpB PE=3 SV=1
Length = 414
Score = 326 bits (836), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 163/242 (67%), Positives = 197/242 (81%), Gaps = 11/242 (4%)
Query: 68 QRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLY 127
+P GRFG++GG++VPETLM AL ELE+A D+ F +EL+ +L+ YVGRETPLY
Sbjct: 18 NQPSKDGRFGKYGGQYVPETLMPALFELETAASNAWKDKLFVKELNHLLKTYVGRETPLY 77
Query: 128 FAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQ 187
A+RLTE+Y+ P I+LKREDLNHTGAHKINNA+GQALLA R+GK RIIAETGAGQ
Sbjct: 78 EAKRLTEYYKTKKAI-PKIWLKREDLNHTGAHKINNALGQALLAIRMGKKRIIAETGAGQ 136
Query: 188 HGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAI 247
HGVATATVCARFGL+CI+YMGA+D++RQ+LNVFRM+LLGAEV+ V+SGTATLKDATSEAI
Sbjct: 137 HGVATATVCARFGLKCIIYMGAEDIKRQSLNVFRMKLLGAEVKVVNSGTATLKDATSEAI 196
Query: 248 RDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRCADCMRWWWFKCHGSLP 307
RDWV+NVE+THYILGSVAGPHP+P +VRDFHA +G ET+ C+ + GSLP
Sbjct: 197 RDWVSNVESTHYILGSVAGPHPFPKIVRDFHAV----IGEETK-KQCLESF-----GSLP 246
Query: 308 RI 309
I
Sbjct: 247 DI 248
>sp|Q7TUL2|TRPB_PROMM Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain
MIT 9313) GN=trpB PE=3 SV=1
Length = 436
Score = 326 bits (835), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/236 (73%), Positives = 192/236 (81%), Gaps = 7/236 (2%)
Query: 60 KESDPAPWQRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDY 119
K++D A RP GRFGR+GG++VPETLM AL+ELE A D F EL +LR Y
Sbjct: 30 KDADLAVSARPSAQGRFGRYGGQYVPETLMPALAELEQAAALAWKDPAFTAELDRLLRSY 89
Query: 120 VGRETPLYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRI 179
VGR TPLY AERLT HY R +GG P I+LKREDLNHTGAHKINNA+GQALLA R+GK RI
Sbjct: 90 VGRATPLYEAERLTAHYCRSDGG-PRIWLKREDLNHTGAHKINNALGQALLALRMGKKRI 148
Query: 180 IAETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATL 239
IAETGAGQHGVATATVCARFGL+C+VYMGA+DM RQALNVFRMRLLGA V+ V +GTATL
Sbjct: 149 IAETGAGQHGVATATVCARFGLECVVYMGAEDMRRQALNVFRMRLLGATVQPVTAGTATL 208
Query: 240 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETR--CAD 293
KDATSEAIRDWVTNVETTHYILGSVAGPHPYPM+VRDFHA +G E R CA+
Sbjct: 209 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMLVRDFHAV----IGQEARQQCAE 260
>sp|Q31D17|TRPB_PROM9 Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain
MIT 9312) GN=trpB PE=3 SV=1
Length = 414
Score = 325 bits (834), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 163/242 (67%), Positives = 196/242 (80%), Gaps = 11/242 (4%)
Query: 68 QRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLY 127
+P GRFG++GG++VPETLM AL ELE+A D+ F +EL+ +L+ YVGRETPLY
Sbjct: 18 NQPSKEGRFGKYGGQYVPETLMPALFELETAASNAWKDKLFVKELNHLLKTYVGRETPLY 77
Query: 128 FAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQ 187
A+RLTEHY+ + I+LKREDLNHTGAHKINNA+GQALLA R+GK RIIAETGAGQ
Sbjct: 78 EAKRLTEHYKTKHAT-TRIWLKREDLNHTGAHKINNALGQALLAIRMGKKRIIAETGAGQ 136
Query: 188 HGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAI 247
HGVATATVCARFG++CI+YMGA+D++RQ+LNVFRM+LLGAEV+ V+SGTATLKDATSEAI
Sbjct: 137 HGVATATVCARFGMKCIIYMGAEDIKRQSLNVFRMKLLGAEVKVVNSGTATLKDATSEAI 196
Query: 248 RDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRCADCMRWWWFKCHGSLP 307
RDWV+NVETTHYILGSVAGPHP+P +VRDFHA +G ET+ C + GSLP
Sbjct: 197 RDWVSNVETTHYILGSVAGPHPFPKIVRDFHAV----IGEETK-KQCQESF-----GSLP 246
Query: 308 RI 309
I
Sbjct: 247 DI 248
>sp|Q7NGX9|TRPB_GLOVI Tryptophan synthase beta chain OS=Gloeobacter violaceus (strain PCC
7421) GN=trpB PE=3 SV=1
Length = 414
Score = 325 bits (833), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 160/222 (72%), Positives = 183/222 (82%), Gaps = 9/222 (4%)
Query: 70 PDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFA 129
PD GRFGRFGG++VPETLM AL++LE+A ++ D F E +G LRD+VGR TPLYFA
Sbjct: 20 PDSRGRFGRFGGQYVPETLMSALAQLEAAFNQYRHDPQFLAEFAGHLRDFVGRPTPLYFA 79
Query: 130 ERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQHG 189
ERLT H+ GG I+LKREDLNHTGAHKINNA+GQALLA R+GK RIIAETGAGQHG
Sbjct: 80 ERLTAHW-----GGGRIFLKREDLNHTGAHKINNALGQALLALRMGKRRIIAETGAGQHG 134
Query: 190 VATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRD 249
VATATVCARFGL+CI+YMG D+ERQ LNV+RM+LLGAEVR V +GT TLKDATSEAIRD
Sbjct: 135 VATATVCARFGLECIIYMGVHDIERQKLNVYRMKLLGAEVRPVAAGTGTLKDATSEAIRD 194
Query: 250 WVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRC 291
WVT+VETTHYILGS AGPHPYP+MVR+F A +G ETR
Sbjct: 195 WVTHVETTHYILGSAAGPHPYPLMVREFQAV----IGRETRV 232
>sp|O66923|TRPB1_AQUAE Tryptophan synthase beta chain 1 OS=Aquifex aeolicus (strain VF5)
GN=trpB1 PE=3 SV=1
Length = 397
Score = 304 bits (779), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 147/224 (65%), Positives = 174/224 (77%), Gaps = 9/224 (4%)
Query: 67 WQRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPL 126
+ PD G FG FGGKFVPETLMYAL ELE +L D +FQ+EL LR+Y GR TPL
Sbjct: 2 YNYPDERGYFGPFGGKFVPETLMYALEELEEKYRELKSDPEFQKELDYYLREYAGRPTPL 61
Query: 127 YFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAG 186
YFAE+LT++ GG IYLKREDL HTGAHKINN +GQ LL KR+GK R+IAETGAG
Sbjct: 62 YFAEKLTKYV-----GGAKIYLKREDLLHTGAHKINNTIGQCLLTKRMGKKRVIAETGAG 116
Query: 187 QHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEA 246
QHGVATAT A FGL+C+VYMG +D ERQALNVFRM+LLGA+V V SG+ TLKDA +EA
Sbjct: 117 QHGVATATASALFGLECVVYMGEEDAERQALNVFRMKLLGAKVEIVKSGSRTLKDAINEA 176
Query: 247 IRDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETR 290
+RDWVTNVE+THY++GSV GPHP+PM+VRDF + +G ET+
Sbjct: 177 LRDWVTNVESTHYVIGSVVGPHPFPMIVRDFQSV----IGRETK 216
>sp|B4RCL0|TRPB_PHEZH Tryptophan synthase beta chain OS=Phenylobacterium zucineum (strain
HLK1) GN=trpB PE=3 SV=1
Length = 406
Score = 301 bits (771), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 151/221 (68%), Positives = 173/221 (78%), Gaps = 9/221 (4%)
Query: 70 PDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFA 129
PD+ GRFG +GG++VPETLM + EL +A D FQ EL+G L YVGR +PLYFA
Sbjct: 14 PDLKGRFGDYGGQYVPETLMPLVHELTAAYEAAKADPAFQAELAGYLTHYVGRPSPLYFA 73
Query: 130 ERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQHG 189
ERLT HY GG IYLKRE+LNHTG+HKINN +GQ LLA+R+GKTRIIAETGAGQHG
Sbjct: 74 ERLTRHY-----GGAKIYLKREELNHTGSHKINNCMGQILLAQRMGKTRIIAETGAGQHG 128
Query: 190 VATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRD 249
VATATVCARFGL C+VYMGA D+ERQ NVFRM LLGAEVR V SG+ATLKDA +EA+RD
Sbjct: 129 VATATVCARFGLPCVVYMGAVDVERQKPNVFRMNLLGAEVRPVTSGSATLKDAMNEALRD 188
Query: 250 WVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETR 290
WVTNV T+Y++GS AG HPYPMMVRDF A +G ETR
Sbjct: 189 WVTNVHDTYYLIGSAAGMHPYPMMVRDFQAV----IGRETR 225
>sp|Q97EF5|TRPB_CLOAB Tryptophan synthase beta chain OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=trpB PE=3 SV=1
Length = 394
Score = 294 bits (752), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 142/234 (60%), Positives = 173/234 (73%), Gaps = 15/234 (6%)
Query: 74 GRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLT 133
GRFG+FGG++VPETLM A++ELE +K +D F E L YVGRETPLYFAE +T
Sbjct: 3 GRFGKFGGQYVPETLMNAINELEVEFNKAINDEKFMMEYKYYLEKYVGRETPLYFAENMT 62
Query: 134 EHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQHGVATA 193
+ N GG IYLKREDLNHTG+HK+NNA+GQ LLAKR+GK R+IAETGAGQHGVATA
Sbjct: 63 K-----NLGGAKIYLKREDLNHTGSHKLNNALGQVLLAKRMGKKRVIAETGAGQHGVATA 117
Query: 194 TVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTN 253
T A FGL+C V+MGA+D+ERQALNVFRM++LGA+V +V SGT TLKDA + A+RDWVTN
Sbjct: 118 TAAALFGLECEVFMGAEDVERQALNVFRMKILGAKVNSVKSGTNTLKDAINAAMRDWVTN 177
Query: 254 VETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRCADCMRWWWFKCHGSLP 307
++ T+Y++GSV GPHPYP +V+DF IGE R K G LP
Sbjct: 178 IDNTYYVIGSVMGPHPYPTIVKDFQKI-IGEEA---------RKQILKAEGRLP 221
>sp|P07345|TRPB_PSEAE Tryptophan synthase beta chain OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=trpB
PE=3 SV=2
Length = 402
Score = 294 bits (752), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 146/221 (66%), Positives = 170/221 (76%), Gaps = 9/221 (4%)
Query: 70 PDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFA 129
PD G FGRFGG++V ETLM + +L K DD FQEEL+ RDYVGR +PLYFA
Sbjct: 8 PDAKGLFGRFGGQYVAETLMPLILDLAREYEKAKDDPAFQEELAYFQRDYVGRPSPLYFA 67
Query: 130 ERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQHG 189
ERLTEH GG IYLKRE+LNHTGAHKINN +GQ LLA+R+GK RIIAETGAG HG
Sbjct: 68 ERLTEHC-----GGAKIYLKREELNHTGAHKINNCIGQILLARRMGKKRIIAETGAGMHG 122
Query: 190 VATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRD 249
VATATV ARFGLQC++YMG D++RQ NVFRM+LLGAEV V +GT TLKDA +EA+RD
Sbjct: 123 VATATVAARFGLQCVIYMGTTDIDRQQANVFRMKLLGAEVIPVTAGTGTLKDAMNEALRD 182
Query: 250 WVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETR 290
WVTNV++T Y++G+VAGPHPYP MVRDF A +G ETR
Sbjct: 183 WVTNVDSTFYLIGTVAGPHPYPAMVRDFQAV----IGKETR 219
>sp|Q5SJB9|TRPB_THET8 Tryptophan synthase beta chain OS=Thermus thermophilus (strain HB8
/ ATCC 27634 / DSM 579) GN=trpB PE=3 SV=1
Length = 418
Score = 292 bits (748), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 143/215 (66%), Positives = 171/215 (79%), Gaps = 6/215 (2%)
Query: 70 PDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFA 129
PD GRFG +GG++VPETL+ AL ELE+A + D F EEL LR + GR TPLY A
Sbjct: 24 PDARGRFGPYGGRYVPETLIPALEELEAAYREAKKDPAFLEELDHYLRQFAGRPTPLYHA 83
Query: 130 ERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQHG 189
+RL+E++ GG ++LKREDL HTGAHKINN +GQALLA+R+GK R+IAETGAGQHG
Sbjct: 84 KRLSEYW-----GGAQVFLKREDLLHTGAHKINNTLGQALLARRMGKRRVIAETGAGQHG 138
Query: 190 VATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRD 249
V+ ATV A FGL+C+VYMG +D+ RQALNVFRM+LLGAEVR V +G+ TLKDAT+EAIRD
Sbjct: 139 VSVATVAALFGLECVVYMGEEDVRRQALNVFRMKLLGAEVRPVAAGSRTLKDATNEAIRD 198
Query: 250 WVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGE 284
W+TNV TT YILGSV GPHPYPMMVRDF + IGE
Sbjct: 199 WITNVRTTFYILGSVVGPHPYPMMVRDFQSV-IGE 232
>sp|Q1ISI9|TRPB_KORVE Tryptophan synthase beta chain OS=Koribacter versatilis (strain
Ellin345) GN=trpB PE=3 SV=1
Length = 408
Score = 292 bits (748), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 138/213 (64%), Positives = 167/213 (78%), Gaps = 5/213 (2%)
Query: 66 PWQRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETP 125
P + G FG +GG+FVPETLM AL ELE+A D+ F+EE+ +LR+Y GR TP
Sbjct: 14 PKKVESQVGYFGSYGGRFVPETLMAALQELEAAYEAAKRDKKFKEEIESLLREYAGRPTP 73
Query: 126 LYFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGA 185
L+ A+ LT+ GG IYLKREDL HTGAHKINN +GQ LLA+R+GK RIIAETGA
Sbjct: 74 LFLAKNLTQKL-----GGAKIYLKREDLLHTGAHKINNCIGQGLLARRMGKHRIIAETGA 128
Query: 186 GQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSE 245
GQHGVA+ATV A FG++C+VYMG++D+ RQ LNVFRM+LLGAEV +V+SG+ TLKDA +E
Sbjct: 129 GQHGVASATVAALFGMECVVYMGSEDVRRQELNVFRMKLLGAEVVSVNSGSRTLKDAINE 188
Query: 246 AIRDWVTNVETTHYILGSVAGPHPYPMMVRDFH 278
A+RDWVTNV TTHY+LGSV G HPYPMMVRDFH
Sbjct: 189 AMRDWVTNVRTTHYLLGSVLGAHPYPMMVRDFH 221
>sp|P16609|TRPB_THET2 Tryptophan synthase beta chain OS=Thermus thermophilus (strain HB27
/ ATCC BAA-163 / DSM 7039) GN=trpB PE=1 SV=1
Length = 404
Score = 292 bits (748), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 143/215 (66%), Positives = 171/215 (79%), Gaps = 6/215 (2%)
Query: 70 PDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFA 129
PD GRFG +GG++VPETL+ AL ELE+A + D F EEL LR + GR TPLY A
Sbjct: 10 PDARGRFGPYGGRYVPETLIPALEELEAAYREAKKDPAFLEELDHYLRQFAGRPTPLYHA 69
Query: 130 ERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQHG 189
+RL+E++ GG ++LKREDL HTGAHKINN +GQALLA+R+GK R+IAETGAGQHG
Sbjct: 70 KRLSEYW-----GGAQVFLKREDLLHTGAHKINNTLGQALLARRMGKRRVIAETGAGQHG 124
Query: 190 VATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRD 249
V+ ATV A FGL+C+VYMG +D+ RQALNVFRM+LLGAEVR V +G+ TLKDAT+EAIRD
Sbjct: 125 VSVATVAALFGLECVVYMGEEDVRRQALNVFRMKLLGAEVRPVAAGSRTLKDATNEAIRD 184
Query: 250 WVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGE 284
W+TNV TT YILGSV GPHPYPMMVRDF + IGE
Sbjct: 185 WITNVRTTFYILGSVVGPHPYPMMVRDFQSV-IGE 218
>sp|Q8R9M9|TRPB_THETN Tryptophan synthase beta chain OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=trpB PE=3 SV=1
Length = 391
Score = 290 bits (743), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 138/205 (67%), Positives = 161/205 (78%), Gaps = 5/205 (2%)
Query: 74 GRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLT 133
GRFGRFGG++VPET+M AL ELE + D F EE L++Y GR TPLY+AE LT
Sbjct: 3 GRFGRFGGQYVPETVMNALIELEREFEEAKKDEKFMEEYRYYLKEYSGRPTPLYYAENLT 62
Query: 134 EHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQHGVATA 193
+ GG IYLKREDLNHTGAHKINN +GQ LLAKR+GK RIIAETGAGQHGVATA
Sbjct: 63 KRL-----GGAKIYLKREDLNHTGAHKINNVLGQVLLAKRMGKKRIIAETGAGQHGVATA 117
Query: 194 TVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTN 253
T A FG++C ++MG +D++RQALNVFRM+LLGA+V AV SGT TLKDA +EAIRDWVTN
Sbjct: 118 TAAAMFGMECEIFMGEEDIKRQALNVFRMKLLGAKVTAVTSGTRTLKDAVNEAIRDWVTN 177
Query: 254 VETTHYILGSVAGPHPYPMMVRDFH 278
+ETT Y++GSV GPHPYP MVRDF
Sbjct: 178 IETTFYVIGSVVGPHPYPTMVRDFQ 202
>sp|A6TM76|TRPB_ALKMQ Tryptophan synthase beta chain OS=Alkaliphilus metalliredigens
(strain QYMF) GN=trpB PE=3 SV=1
Length = 400
Score = 290 bits (743), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 137/204 (67%), Positives = 164/204 (80%), Gaps = 5/204 (2%)
Query: 75 RFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLTE 134
+FG+FGG+FVPETLM AL ELE + +D +FQE +R+Y GR TPLY+AE LT+
Sbjct: 10 KFGKFGGQFVPETLMNALIELERQFIQTKEDDEFQEMYRYYVREYSGRPTPLYYAENLTK 69
Query: 135 HYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQHGVATAT 194
GG IYLKREDLNHTGAHKINN +GQ LLA+++ K RIIAETGAGQHGVATAT
Sbjct: 70 KL-----GGGKIYLKREDLNHTGAHKINNVIGQVLLARKMKKKRIIAETGAGQHGVATAT 124
Query: 195 VCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNV 254
+CA F L+C+VYMGA+D+ERQALNVF+M +LGAEV +V SGTATLKDAT+EAIRDWV NV
Sbjct: 125 ICAMFDLECVVYMGAEDIERQALNVFKMEMLGAEVVSVTSGTATLKDATNEAIRDWVANV 184
Query: 255 ETTHYILGSVAGPHPYPMMVRDFH 278
+ T+Y++GSV GPHPYP MVRDF
Sbjct: 185 KDTYYVIGSVVGPHPYPTMVRDFQ 208
>sp|B5EK18|TRPB_ACIF5 Tryptophan synthase beta chain OS=Acidithiobacillus ferrooxidans
(strain ATCC 53993) GN=trpB PE=3 SV=1
Length = 399
Score = 290 bits (742), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 144/229 (62%), Positives = 175/229 (76%), Gaps = 10/229 (4%)
Query: 67 WQRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPL 126
+ PD FG +G +GG+FV ETL+ AL ELE A + D +F+ EL LR +VGR PL
Sbjct: 4 YALPDAFGHYGPYGGRFVAETLIPALEELERAYQEAQRDPEFRAELHSELRQFVGRPNPL 63
Query: 127 YFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAG 186
Y A RL+ GG IYLKREDLNHTGAHKINNAVGQALLA+R+GK R+IAETGAG
Sbjct: 64 YHAGRLSREL-----GGAQIYLKREDLNHTGAHKINNAVGQALLARRMGKKRVIAETGAG 118
Query: 187 QHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEA 246
QHGVATATV R+G++C+VYMG +D++RQ+ NVFRMRLLGA+V AV SGT TLKDA +EA
Sbjct: 119 QHGVATATVATRYGMECLVYMGEEDIQRQSSNVFRMRLLGAQVTAVSSGTRTLKDALNEA 178
Query: 247 IRDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRCADCM 295
+RDWVTNVE+T Y++G+VAGPHPYP+MVRDFH +G E R A C+
Sbjct: 179 LRDWVTNVESTFYVIGTVAGPHPYPVMVRDFHRV----IGDEAR-AQCL 222
>sp|B7J4S9|TRPB_ACIF2 Tryptophan synthase beta chain OS=Acidithiobacillus ferrooxidans
(strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=trpB PE=3
SV=1
Length = 399
Score = 290 bits (742), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 144/229 (62%), Positives = 175/229 (76%), Gaps = 10/229 (4%)
Query: 67 WQRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPL 126
+ PD FG +G +GG+FV ETL+ AL ELE A + D +F+ EL LR +VGR PL
Sbjct: 4 YALPDAFGHYGPYGGRFVAETLIPALEELERAYQEAQRDPEFRAELHSELRQFVGRPNPL 63
Query: 127 YFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAG 186
Y A RL+ GG IYLKREDLNHTGAHKINNAVGQALLA+R+GK R+IAETGAG
Sbjct: 64 YHAGRLSREL-----GGAQIYLKREDLNHTGAHKINNAVGQALLARRMGKKRVIAETGAG 118
Query: 187 QHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEA 246
QHGVATATV R+G++C+VYMG +D++RQ+ NVFRMRLLGA+V AV SGT TLKDA +EA
Sbjct: 119 QHGVATATVATRYGMECLVYMGEEDIQRQSSNVFRMRLLGAQVTAVSSGTRTLKDALNEA 178
Query: 247 IRDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRCADCM 295
+RDWVTNVE+T Y++G+VAGPHPYP+MVRDFH +G E R A C+
Sbjct: 179 LRDWVTNVESTFYVIGTVAGPHPYPVMVRDFHRV----IGDEAR-AQCL 222
>sp|Q2J2G4|TRPB_RHOP2 Tryptophan synthase beta chain OS=Rhodopseudomonas palustris
(strain HaA2) GN=trpB PE=3 SV=1
Length = 404
Score = 289 bits (740), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/222 (64%), Positives = 167/222 (75%), Gaps = 9/222 (4%)
Query: 70 PDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFA 129
PD G FG FGG+FV ETLM + LE A + DD F+ E+ G L+ YVGR +PLYFA
Sbjct: 13 PDERGHFGIFGGRFVAETLMPLILALEKAYAEAKDDPAFRAEMDGYLKHYVGRPSPLYFA 72
Query: 130 ERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQHG 189
ERLTEH+ GG IY KREDLNHTGAHK+NN +GQ +LA+R+GK RIIAETGAG HG
Sbjct: 73 ERLTEHF-----GGAKIYFKREDLNHTGAHKVNNVLGQIMLARRMGKPRIIAETGAGMHG 127
Query: 190 VATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRD 249
VATAT+CA+FGLQC+VYMGA D++RQ NV RM+ LGAEVR V SG ATLKDA +EA+RD
Sbjct: 128 VATATMCAKFGLQCVVYMGAVDVDRQQPNVLRMKALGAEVRPVTSGAATLKDAMNEALRD 187
Query: 250 WVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRC 291
WVTNV T Y +G+VAGPHPYPMMVRDF A +G E R
Sbjct: 188 WVTNVHDTFYCIGTVAGPHPYPMMVRDFQAV----IGQEVRA 225
>sp|Q5ZVY4|TRPB_LEGPH Tryptophan synthase beta chain OS=Legionella pneumophila subsp.
pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM
7513) GN=trpB PE=3 SV=1
Length = 399
Score = 288 bits (738), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 140/224 (62%), Positives = 172/224 (76%), Gaps = 9/224 (4%)
Query: 68 QRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLY 127
+ PD FG FG +GG FV +TL++AL +LE A K +D+DF EL L+DYVGR PLY
Sbjct: 5 ELPDEFGHFGPYGGMFVADTLVHALKQLEHAYTKYRNDQDFLSELHTELKDYVGRPNPLY 64
Query: 128 FAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQ 187
A L++ GG IYLKREDLNHTGAHKINN +GQALLAKR+GKTR+IAETGAGQ
Sbjct: 65 HAVHLSKKI-----GGAQIYLKREDLNHTGAHKINNTIGQALLAKRMGKTRVIAETGAGQ 119
Query: 188 HGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAI 247
HGVATATV A+FG QC+VYMG++D++RQ+ NV+RM+LLGAEV V SG+ TLKDA +EA+
Sbjct: 120 HGVATATVAAKFGFQCVVYMGSEDIKRQSSNVYRMKLLGAEVVPVTSGSKTLKDALNEAL 179
Query: 248 RDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRC 291
RDWV++V+ T YI+G+VAGPHPYP MVRDF A +G E R
Sbjct: 180 RDWVSHVDDTFYIIGTVAGPHPYPQMVRDFQAI----IGVEARA 219
>sp|Q13EQ2|TRPB_RHOPS Tryptophan synthase beta chain OS=Rhodopseudomonas palustris
(strain BisB5) GN=trpB PE=3 SV=1
Length = 404
Score = 288 bits (738), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 143/221 (64%), Positives = 166/221 (75%), Gaps = 9/221 (4%)
Query: 70 PDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFA 129
PD G FG FGG+FV ETLM + ELE A + DD F+ E+ G L+ YVGR +PLYFA
Sbjct: 13 PDERGHFGIFGGRFVAETLMPLILELEKAYAEAKDDPAFRTEMDGYLKHYVGRPSPLYFA 72
Query: 130 ERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQHG 189
ERLTEH+ GG IY KREDLNHTGAHK+NN +GQ +LA+R+GK RIIAETGAG HG
Sbjct: 73 ERLTEHF-----GGAKIYFKREDLNHTGAHKVNNVLGQIMLARRMGKQRIIAETGAGMHG 127
Query: 190 VATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRD 249
VATAT+CA+FGLQC+VYMGA D+ERQ NV RM+ LGAEVR V SG TLKDA +EA+RD
Sbjct: 128 VATATMCAKFGLQCVVYMGAVDVERQQPNVLRMKALGAEVRPVTSGANTLKDAMNEALRD 187
Query: 250 WVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETR 290
WVTNV T Y +G+VAGPHPYPMMVRDF +G E R
Sbjct: 188 WVTNVHDTFYCIGTVAGPHPYPMMVRDFQEV----IGQEVR 224
>sp|Q5WX32|TRPB_LEGPL Tryptophan synthase beta chain OS=Legionella pneumophila (strain
Lens) GN=trpB PE=3 SV=1
Length = 399
Score = 288 bits (738), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 140/224 (62%), Positives = 172/224 (76%), Gaps = 9/224 (4%)
Query: 68 QRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLY 127
+ PD FG FG +GG FV +TL++AL +LE A K +D+DF EL L+DYVGR PLY
Sbjct: 5 ELPDEFGHFGPYGGMFVADTLVHALKQLEHAYTKYRNDQDFLSELHTELKDYVGRPNPLY 64
Query: 128 FAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQ 187
A L++ GG IYLKREDLNHTGAHKINN +GQALLAKR+GKTR+IAETGAGQ
Sbjct: 65 HAVHLSKKI-----GGAQIYLKREDLNHTGAHKINNTIGQALLAKRMGKTRVIAETGAGQ 119
Query: 188 HGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAI 247
HGVATATV A+FG QC+VYMG++D++RQ+ NV+RM+LLGAEV V SG+ TLKDA +EA+
Sbjct: 120 HGVATATVAAKFGFQCVVYMGSEDIKRQSSNVYRMKLLGAEVVPVTSGSKTLKDALNEAL 179
Query: 248 RDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRC 291
RDWV++V+ T YI+G+VAGPHPYP MVRDF A +G E R
Sbjct: 180 RDWVSHVDDTFYIIGTVAGPHPYPQMVRDFQAI----IGVEARA 219
>sp|Q5X5Q2|TRPB_LEGPA Tryptophan synthase beta chain OS=Legionella pneumophila (strain
Paris) GN=trpB PE=3 SV=1
Length = 399
Score = 288 bits (738), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 140/224 (62%), Positives = 172/224 (76%), Gaps = 9/224 (4%)
Query: 68 QRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLY 127
+ PD FG FG +GG FV +TL++AL +LE A K +D+DF EL L+DYVGR PLY
Sbjct: 5 ELPDEFGHFGPYGGMFVADTLVHALKQLEHAYTKYRNDQDFLSELHTELKDYVGRPNPLY 64
Query: 128 FAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQ 187
A L++ GG IYLKREDLNHTGAHKINN +GQALLAKR+GKTR+IAETGAGQ
Sbjct: 65 HAVHLSKKI-----GGAQIYLKREDLNHTGAHKINNTIGQALLAKRMGKTRVIAETGAGQ 119
Query: 188 HGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAI 247
HGVATATV A+FG QC+VYMG++D++RQ+ NV+RM+LLGAEV V SG+ TLKDA +EA+
Sbjct: 120 HGVATATVAAKFGFQCVVYMGSEDIKRQSSNVYRMKLLGAEVVPVTSGSKTLKDALNEAL 179
Query: 248 RDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRC 291
RDWV++V+ T YI+G+VAGPHPYP MVRDF A +G E R
Sbjct: 180 RDWVSHVDDTFYIIGTVAGPHPYPQMVRDFQAI----IGVEARA 219
>sp|B0K2T9|TRPB_THEPX Tryptophan synthase beta chain OS=Thermoanaerobacter sp. (strain
X514) GN=trpB PE=3 SV=1
Length = 391
Score = 288 bits (737), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 135/205 (65%), Positives = 159/205 (77%), Gaps = 5/205 (2%)
Query: 74 GRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLT 133
GRFGRFGG++VPET+M AL ELE K D+DF EE LR+Y GR TPLY+AE LT
Sbjct: 3 GRFGRFGGQYVPETVMNALIELEREFEKAKQDKDFMEEYRYYLREYSGRPTPLYYAENLT 62
Query: 134 EHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQHGVATA 193
+ GG IYLKREDLNHTGAHKINN +GQ LLAKR+ K R+IAETGAGQHGVATA
Sbjct: 63 KKL-----GGAKIYLKREDLNHTGAHKINNVLGQILLAKRMNKKRVIAETGAGQHGVATA 117
Query: 194 TVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTN 253
T A FG++C ++MG +D++RQ+LNVFRM+LLGA+V V SGT TLKDA +EAIRDWVTN
Sbjct: 118 TAAAMFGMECEIFMGEEDIKRQSLNVFRMKLLGAKVTPVKSGTGTLKDAVNEAIRDWVTN 177
Query: 254 VETTHYILGSVAGPHPYPMMVRDFH 278
+ T Y++GSV GPHPYP MVRDF
Sbjct: 178 INDTFYVIGSVVGPHPYPTMVRDFQ 202
>sp|C1DH66|TRPB_AZOVD Tryptophan synthase beta chain OS=Azotobacter vinelandii (strain DJ
/ ATCC BAA-1303) GN=trpB PE=3 SV=1
Length = 406
Score = 288 bits (736), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 145/221 (65%), Positives = 168/221 (76%), Gaps = 9/221 (4%)
Query: 70 PDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFA 129
PD G FGRFGG++V ETLM + +L + D F EEL+ RDYVGR +PLYFA
Sbjct: 10 PDEKGLFGRFGGQYVAETLMPLILDLAEEYERAKVDPAFLEELAYFQRDYVGRPSPLYFA 69
Query: 130 ERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQHG 189
ERLTEH GG IYLKRE+LNHTGAHKINN +GQ LLA+R+GK RIIAETGAG HG
Sbjct: 70 ERLTEHC-----GGAKIYLKREELNHTGAHKINNCIGQILLARRMGKQRIIAETGAGMHG 124
Query: 190 VATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRD 249
VATATV ARFGLQC++YMG D++RQ NVFRM+LLGAEV V +GT TLKDA +EA+RD
Sbjct: 125 VATATVAARFGLQCVIYMGTTDIDRQQANVFRMKLLGAEVIPVTAGTGTLKDAMNEALRD 184
Query: 250 WVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETR 290
WVTNVETT Y++G+VAGPHPYP MVRDF A +G ETR
Sbjct: 185 WVTNVETTFYLIGTVAGPHPYPAMVRDFQAV----IGKETR 221
>sp|B0K8T6|TRPB_THEP3 Tryptophan synthase beta chain OS=Thermoanaerobacter
pseudethanolicus (strain ATCC 33223 / 39E) GN=trpB PE=3
SV=1
Length = 391
Score = 288 bits (736), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 134/205 (65%), Positives = 161/205 (78%), Gaps = 5/205 (2%)
Query: 74 GRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLYFAERLT 133
GRFGRFGG++VPET+M AL ELE K +D+DF EE LR+Y GR TPLY+AE LT
Sbjct: 3 GRFGRFGGQYVPETVMNALIELEREFEKAKEDKDFMEEYRYYLREYSGRPTPLYYAENLT 62
Query: 134 EHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQHGVATA 193
+ GG IYLKREDLNHTGAHKINN +GQ LLAKR+ K R+IAETGAGQHGVATA
Sbjct: 63 KRL-----GGAKIYLKREDLNHTGAHKINNVLGQILLAKRMNKKRVIAETGAGQHGVATA 117
Query: 194 TVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTN 253
T A FG++C ++MG +D++RQ+LNVFRM+LLGA+V V +GT TLKDA +EAIRDWVTN
Sbjct: 118 TAAAMFGMECEIFMGEEDIKRQSLNVFRMKLLGAKVTPVTTGTKTLKDAVNEAIRDWVTN 177
Query: 254 VETTHYILGSVAGPHPYPMMVRDFH 278
++ T Y++GSV GPHPYP MVRDF
Sbjct: 178 IDNTFYVIGSVVGPHPYPTMVRDFQ 202
>sp|A5IBF7|TRPB_LEGPC Tryptophan synthase beta chain OS=Legionella pneumophila (strain
Corby) GN=trpB PE=3 SV=1
Length = 399
Score = 288 bits (736), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 140/224 (62%), Positives = 171/224 (76%), Gaps = 9/224 (4%)
Query: 68 QRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPLY 127
+ PD FG FG +GG FV +TL+ AL +LE A K +D+DF EL L+DYVGR PLY
Sbjct: 5 ELPDEFGHFGPYGGMFVADTLVSALKQLEHAYTKYRNDQDFLSELHTELKDYVGRPNPLY 64
Query: 128 FAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAGQ 187
A L++ GG IYLKREDLNHTGAHKINN +GQALLAKR+GKTR+IAETGAGQ
Sbjct: 65 HAVHLSKKI-----GGAQIYLKREDLNHTGAHKINNTIGQALLAKRMGKTRVIAETGAGQ 119
Query: 188 HGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAI 247
HGVATATV A+FG QC+VYMG++D++RQ+ NV+RM+LLGAEV V SG+ TLKDA +EA+
Sbjct: 120 HGVATATVAAKFGFQCVVYMGSEDIKRQSSNVYRMKLLGAEVVPVTSGSKTLKDALNEAL 179
Query: 248 RDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRC 291
RDWV++V+ T YI+G+VAGPHPYP MVRDF A +G E R
Sbjct: 180 RDWVSHVDDTFYIIGTVAGPHPYPQMVRDFQAI----IGVEARA 219
>sp|Q8ESU4|TRPB_OCEIH Tryptophan synthase beta chain OS=Oceanobacillus iheyensis (strain
DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) GN=trpB PE=3
SV=1
Length = 399
Score = 288 bits (736), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 140/241 (58%), Positives = 171/241 (70%), Gaps = 15/241 (6%)
Query: 67 WQRPDVFGRFGRFGGKFVPETLMYALSELESALHKLADDRDFQEELSGILRDYVGRETPL 126
+ P+ G++G FGG+FVPE LM A+ ELE A D F EEL L +Y+GRETPL
Sbjct: 4 YSFPNTKGKYGEFGGRFVPELLMPAVLELEKAYEDALKDESFNEELQTYLTEYIGRETPL 63
Query: 127 YFAERLTEHYRRPNGGGPHIYLKREDLNHTGAHKINNAVGQALLAKRLGKTRIIAETGAG 186
Y A++LTEH GG IYLKREDLNHTGAHKINN +GQALL R+GK +++AETGAG
Sbjct: 64 YHAKKLTEH-----AGGAQIYLKREDLNHTGAHKINNTIGQALLTLRMGKKKVVAETGAG 118
Query: 187 QHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEA 246
QHGVATATVC+ GL+CIV+MG +D++RQ LNVFRM LLGAEV +V G+ TLKDA +EA
Sbjct: 119 QHGVATATVCSLLGLECIVFMGEEDIKRQKLNVFRMELLGAEVVSVSQGSGTLKDAVNEA 178
Query: 247 IRDWVTNVETTHYILGSVAGPHPYPMMVRDFHATSIGEMGWETRCADCMRWWWFKCHGSL 306
+R WV NV THYI+GSV GPHP+P +VRDF + +G ET + K GSL
Sbjct: 179 LRYWVNNVNDTHYIIGSVVGPHPFPKIVRDFQSV----IGKET------KEQSMKKIGSL 228
Query: 307 P 307
P
Sbjct: 229 P 229
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,307,960
Number of Sequences: 539616
Number of extensions: 4907426
Number of successful extensions: 13610
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 12672
Number of HSP's gapped (non-prelim): 558
length of query: 310
length of database: 191,569,459
effective HSP length: 117
effective length of query: 193
effective length of database: 128,434,387
effective search space: 24787836691
effective search space used: 24787836691
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)