Query 021616
Match_columns 310
No_of_seqs 138 out of 1467
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 06:45:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021616.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021616hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nks_A Protoporphyrinogen oxid 100.0 1.9E-37 6.6E-42 291.4 20.7 282 2-303 181-473 (477)
2 1sez_A Protoporphyrinogen oxid 100.0 1.4E-36 4.7E-41 287.7 21.4 295 2-309 187-498 (504)
3 3lov_A Protoporphyrinogen oxid 100.0 6.3E-35 2.1E-39 274.3 24.6 283 2-307 185-468 (475)
4 3i6d_A Protoporphyrinogen oxid 100.0 2E-35 7E-40 276.7 20.5 280 3-304 188-468 (470)
5 2ivd_A PPO, PPOX, protoporphyr 100.0 8.2E-33 2.8E-37 260.0 26.2 285 3-308 187-477 (478)
6 3qj4_A Renalase; FAD/NAD(P)-bi 100.0 1.8E-30 6.1E-35 234.0 18.4 234 47-303 102-341 (342)
7 4dsg_A UDP-galactopyranose mut 99.9 1.2E-26 4E-31 218.4 20.4 235 47-301 206-452 (484)
8 2jae_A L-amino acid oxidase; o 99.9 1.2E-25 4.1E-30 211.9 18.4 245 47-307 229-488 (489)
9 2z3y_A Lysine-specific histone 99.9 1.3E-25 4.3E-30 218.9 19.1 239 48-305 392-659 (662)
10 3ka7_A Oxidoreductase; structu 99.9 2.5E-25 8.5E-30 205.8 20.0 225 49-301 188-424 (425)
11 4gde_A UDP-galactopyranose mut 99.9 2E-25 6.8E-30 211.3 19.0 241 45-302 210-477 (513)
12 2xag_A Lysine-specific histone 99.9 9.6E-26 3.3E-30 223.2 17.1 243 48-308 563-833 (852)
13 1s3e_A Amine oxidase [flavin-c 99.9 1.1E-24 3.6E-29 207.0 23.1 239 48-307 206-457 (520)
14 1b37_A Protein (polyamine oxid 99.9 5.7E-24 1.9E-28 199.7 19.3 242 49-309 198-463 (472)
15 2yg5_A Putrescine oxidase; oxi 99.9 8.1E-24 2.8E-28 197.4 18.4 232 49-305 207-452 (453)
16 2iid_A L-amino-acid oxidase; f 99.9 1.1E-23 3.9E-28 198.8 17.0 240 48-306 232-486 (498)
17 3nrn_A Uncharacterized protein 99.9 1.9E-22 6.4E-27 186.5 20.6 215 49-300 181-403 (421)
18 1yvv_A Amine oxidase, flavin-c 99.9 2.9E-22 1E-26 179.3 20.2 229 48-306 101-329 (336)
19 4gut_A Lysine-specific histone 99.9 5.6E-23 1.9E-27 202.2 16.3 238 48-302 525-775 (776)
20 2vvm_A Monoamine oxidase N; FA 99.9 1.2E-21 4.1E-26 184.8 22.7 228 48-307 246-488 (495)
21 1rsg_A FMS1 protein; FAD bindi 99.8 7.7E-19 2.6E-23 166.5 20.3 240 51-306 197-509 (516)
22 4dgk_A Phytoene dehydrogenase; 99.8 6.1E-19 2.1E-23 166.4 18.3 245 48-305 212-492 (501)
23 2b9w_A Putative aminooxidase; 99.8 3E-18 1E-22 158.3 16.1 221 49-301 198-423 (424)
24 3ayj_A Pro-enzyme of L-phenyla 99.7 4.5E-17 1.5E-21 157.6 15.4 247 48-306 338-681 (721)
25 3k7m_X 6-hydroxy-L-nicotine ox 99.7 8.3E-17 2.8E-21 148.9 16.5 214 51-303 201-425 (431)
26 2bi7_A UDP-galactopyranose mut 99.5 3.5E-13 1.2E-17 122.8 14.1 175 50-307 192-373 (384)
27 1v0j_A UDP-galactopyranose mut 99.5 4.5E-14 1.5E-18 129.4 7.5 184 51-306 199-389 (399)
28 1i8t_A UDP-galactopyranose mut 99.4 8.6E-13 2.9E-17 119.6 11.5 176 50-302 188-365 (367)
29 2e1m_C L-glutamate oxidase; L- 99.0 5.5E-10 1.9E-14 90.7 7.2 108 194-306 37-154 (181)
30 2bcg_G Secretory pathway GDP d 98.8 1.4E-07 4.9E-12 87.5 14.7 196 50-301 235-438 (453)
31 3hdq_A UDP-galactopyranose mut 98.7 6.9E-08 2.4E-12 87.9 10.3 173 50-303 216-390 (397)
32 1d5t_A Guanine nucleotide diss 98.6 1.2E-06 4.1E-11 80.8 16.5 197 49-301 226-427 (433)
33 3kkj_A Amine oxidase, flavin-c 98.4 5.3E-05 1.8E-09 63.7 19.0 87 210-306 243-329 (336)
34 1vg0_A RAB proteins geranylger 98.0 0.0012 4.2E-08 63.3 21.9 212 48-301 369-596 (650)
35 2e1m_B L-glutamate oxidase; L- 97.7 3.1E-05 1.1E-09 58.6 4.9 105 99-231 4-111 (130)
36 3p1w_A Rabgdi protein; GDI RAB 97.2 0.00052 1.8E-08 63.7 7.1 63 48-113 247-313 (475)
37 4hb9_A Similarities with proba 97.1 0.055 1.9E-06 48.4 19.3 54 58-114 113-166 (412)
38 3ihg_A RDME; flavoenzyme, anth 97.0 0.036 1.2E-06 52.1 17.7 47 67-114 133-183 (535)
39 2e1m_A L-glutamate oxidase; L- 96.9 0.0011 3.8E-08 59.7 5.5 45 47-92 310-354 (376)
40 3oz2_A Digeranylgeranylglycero 96.6 0.055 1.9E-06 48.0 15.0 50 64-113 112-161 (397)
41 3dje_A Fructosyl amine: oxygen 96.6 0.062 2.1E-06 48.8 15.4 63 48-114 148-221 (438)
42 3fmw_A Oxygenase; mithramycin, 96.6 0.053 1.8E-06 51.5 15.0 47 67-114 161-207 (570)
43 2qa1_A PGAE, polyketide oxygen 96.4 0.27 9.3E-06 45.7 18.8 47 67-114 119-165 (500)
44 3nix_A Flavoprotein/dehydrogen 96.4 0.13 4.3E-06 46.4 15.8 46 67-113 119-165 (421)
45 3rp8_A Flavoprotein monooxygen 96.4 0.37 1.3E-05 43.2 18.8 53 57-113 127-180 (407)
46 2qa2_A CABE, polyketide oxygen 96.1 0.9 3.1E-05 42.1 24.9 48 66-114 119-166 (499)
47 1ryi_A Glycine oxidase; flavop 96.1 0.019 6.3E-07 51.2 8.4 191 57-302 164-361 (382)
48 3atr_A Conserved archaeal prot 95.9 0.53 1.8E-05 43.0 17.6 56 58-114 101-162 (453)
49 3cgv_A Geranylgeranyl reductas 94.8 1.9 6.6E-05 37.9 18.9 54 59-113 104-161 (397)
50 2gmh_A Electron transfer flavo 93.7 4.8 0.00016 38.0 19.2 34 272-305 347-386 (584)
51 2dkh_A 3-hydroxybenzoate hydro 93.7 5.1 0.00017 38.3 19.1 50 70-119 159-217 (639)
52 3nyc_A D-arginine dehydrogenas 93.4 0.091 3.1E-06 46.4 5.3 61 49-114 143-209 (381)
53 3dme_A Conserved exported prot 92.9 0.21 7.1E-06 43.8 6.9 57 56-114 149-209 (369)
54 3pvc_A TRNA 5-methylaminomethy 92.7 0.19 6.7E-06 48.7 7.0 62 49-113 401-468 (689)
55 3ps9_A TRNA 5-methylaminomethy 92.7 0.2 6.8E-06 48.4 6.9 61 49-113 406-472 (676)
56 3v76_A Flavoprotein; structura 92.1 0.34 1.2E-05 43.9 7.3 57 53-114 128-187 (417)
57 2i0z_A NAD(FAD)-utilizing dehy 91.6 0.35 1.2E-05 44.1 7.0 57 55-114 132-191 (447)
58 3lxd_A FAD-dependent pyridine 91.5 0.46 1.6E-05 42.8 7.6 55 56-113 196-250 (415)
59 2vou_A 2,6-dihydroxypyridine h 91.4 0.44 1.5E-05 42.6 7.2 55 56-114 98-153 (397)
60 2uzz_A N-methyl-L-tryptophan o 91.4 0.36 1.2E-05 42.5 6.5 57 58-120 150-209 (372)
61 2xdo_A TETX2 protein; tetracyc 91.3 0.38 1.3E-05 43.0 6.7 53 58-114 129-182 (398)
62 2gf3_A MSOX, monomeric sarcosi 91.2 0.37 1.3E-05 42.6 6.5 53 57-114 150-205 (389)
63 2oln_A NIKD protein; flavoprot 91.2 0.38 1.3E-05 42.9 6.5 52 57-113 153-207 (397)
64 2gv8_A Monooxygenase; FMO, FAD 91.0 0.4 1.4E-05 43.7 6.6 55 58-113 116-176 (447)
65 3lad_A Dihydrolipoamide dehydr 91.0 0.65 2.2E-05 42.6 8.1 46 67-113 234-279 (476)
66 3fg2_P Putative rubredoxin red 90.7 0.52 1.8E-05 42.3 7.1 54 57-113 187-240 (404)
67 2x3n_A Probable FAD-dependent 90.7 0.43 1.5E-05 42.5 6.5 59 57-119 107-172 (399)
68 3fpz_A Thiazole biosynthetic e 90.7 0.12 4E-06 45.1 2.6 37 270-306 282-326 (326)
69 1xdi_A RV3303C-LPDA; reductase 90.6 0.57 1.9E-05 43.4 7.3 54 56-113 225-278 (499)
70 4at0_A 3-ketosteroid-delta4-5a 90.6 0.48 1.6E-05 44.1 6.8 60 55-114 200-264 (510)
71 3o0h_A Glutathione reductase; 90.5 0.65 2.2E-05 42.8 7.6 44 66-113 244-287 (484)
72 2ywl_A Thioredoxin reductase r 90.5 0.49 1.7E-05 37.0 5.9 50 58-113 57-109 (180)
73 2gag_B Heterotetrameric sarcos 90.4 0.47 1.6E-05 42.2 6.5 63 48-114 162-230 (405)
74 4a9w_A Monooxygenase; baeyer-v 90.4 0.38 1.3E-05 41.7 5.7 54 56-114 78-132 (357)
75 1y56_B Sarcosine oxidase; dehy 90.2 0.56 1.9E-05 41.4 6.7 53 57-114 149-205 (382)
76 3iwa_A FAD-dependent pyridine 89.9 0.65 2.2E-05 42.6 7.1 53 56-112 204-256 (472)
77 3d1c_A Flavin-containing putat 89.7 0.62 2.1E-05 40.8 6.6 49 61-114 95-143 (369)
78 3nlc_A Uncharacterized protein 89.7 0.59 2E-05 44.0 6.7 55 57-114 220-277 (549)
79 2v3a_A Rubredoxin reductase; a 89.4 0.71 2.4E-05 41.1 6.7 43 67-113 200-242 (384)
80 3ef6_A Toluene 1,2-dioxygenase 89.2 0.78 2.7E-05 41.2 6.9 54 56-113 187-240 (410)
81 1fec_A Trypanothione reductase 89.0 0.99 3.4E-05 41.7 7.6 44 67-113 244-287 (490)
82 2wpf_A Trypanothione reductase 88.9 1.1 3.6E-05 41.6 7.8 45 65-112 246-290 (495)
83 2gqf_A Hypothetical protein HI 88.8 0.8 2.7E-05 41.2 6.7 54 56-114 108-168 (401)
84 1ges_A Glutathione reductase; 88.7 1.1 3.9E-05 40.8 7.7 45 65-112 219-263 (450)
85 1pn0_A Phenol 2-monooxygenase; 88.6 17 0.00057 34.9 16.1 33 272-304 351-389 (665)
86 2yqu_A 2-oxoglutarate dehydrog 88.2 0.98 3.3E-05 41.2 6.9 43 67-113 221-263 (455)
87 4dna_A Probable glutathione re 87.8 1 3.6E-05 41.1 6.9 46 65-113 222-267 (463)
88 2qae_A Lipoamide, dihydrolipoy 87.6 1.6 5.5E-05 39.9 8.1 48 65-113 227-275 (468)
89 3gwf_A Cyclohexanone monooxyge 87.6 1 3.5E-05 42.3 6.8 54 56-112 89-145 (540)
90 1y0p_A Fumarate reductase flav 87.6 1.2 4.3E-05 41.9 7.4 57 57-113 255-316 (571)
91 3s5w_A L-ornithine 5-monooxyge 87.5 0.44 1.5E-05 43.5 4.2 57 56-112 129-190 (463)
92 3r9u_A Thioredoxin reductase; 87.5 1.1 3.9E-05 38.0 6.6 55 58-112 187-242 (315)
93 3oc4_A Oxidoreductase, pyridin 87.5 1.3 4.5E-05 40.3 7.4 54 56-114 191-244 (452)
94 4ap3_A Steroid monooxygenase; 87.4 0.97 3.3E-05 42.5 6.5 54 56-112 101-157 (549)
95 1qo8_A Flavocytochrome C3 fuma 87.3 1.8 6E-05 40.8 8.3 58 57-114 250-312 (566)
96 1m6i_A Programmed cell death p 86.8 1.2 4.1E-05 41.1 6.8 45 65-113 237-281 (493)
97 1w4x_A Phenylacetone monooxyge 86.5 1.3 4.4E-05 41.5 6.8 54 57-113 97-153 (542)
98 2hqm_A GR, grase, glutathione 86.4 2 6.8E-05 39.5 7.9 56 55-112 227-283 (479)
99 1d4d_A Flavocytochrome C fumar 86.3 1.6 5.6E-05 41.1 7.5 56 58-113 256-316 (572)
100 1mo9_A ORF3; nucleotide bindin 86.3 1.7 5.8E-05 40.5 7.5 46 65-112 266-314 (523)
101 3e1t_A Halogenase; flavoprotei 86.2 1.5 5.1E-05 40.7 7.0 57 58-114 112-172 (512)
102 2r9z_A Glutathione amide reduc 86.2 1.5 5E-05 40.2 6.9 44 66-112 219-262 (463)
103 1zmd_A Dihydrolipoyl dehydroge 85.8 2.6 8.9E-05 38.5 8.4 57 56-113 222-281 (474)
104 3uox_A Otemo; baeyer-villiger 85.8 1.3 4.6E-05 41.5 6.6 54 56-112 89-145 (545)
105 3lzw_A Ferredoxin--NADP reduct 85.8 1.2 4.1E-05 38.1 5.8 52 57-112 67-121 (332)
106 3itj_A Thioredoxin reductase 1 85.8 1.9 6.6E-05 36.9 7.2 56 57-112 212-269 (338)
107 2a8x_A Dihydrolipoyl dehydroge 85.7 2.6 9E-05 38.4 8.4 55 56-112 214-269 (464)
108 2zbw_A Thioredoxin reductase; 85.6 1.5 5.2E-05 37.7 6.5 53 57-113 65-120 (335)
109 3ab1_A Ferredoxin--NADP reduct 85.6 1.7 5.8E-05 37.9 6.8 53 57-112 74-129 (360)
110 2xve_A Flavin-containing monoo 85.4 1.8 6.3E-05 39.6 7.2 56 57-112 101-164 (464)
111 1onf_A GR, grase, glutathione 85.2 2.3 7.8E-05 39.3 7.8 45 67-113 230-274 (500)
112 1q1r_A Putidaredoxin reductase 85.0 2.5 8.5E-05 38.2 7.8 45 65-112 202-248 (431)
113 3axb_A Putative oxidoreductase 84.9 1.1 3.8E-05 40.5 5.4 53 58-114 182-254 (448)
114 2r0c_A REBC; flavin adenine di 84.8 2.2 7.4E-05 40.0 7.5 55 59-114 140-196 (549)
115 1pj5_A N,N-dimethylglycine oxi 84.5 1.4 4.9E-05 43.5 6.3 62 49-114 140-207 (830)
116 3c96_A Flavin-containing monoo 84.3 2.7 9.1E-05 37.6 7.6 43 70-114 125-169 (410)
117 1dxl_A Dihydrolipoamide dehydr 84.0 2.6 8.8E-05 38.5 7.5 49 65-114 229-279 (470)
118 3l8k_A Dihydrolipoyl dehydroge 83.6 1.8 6E-05 39.6 6.2 56 57-113 214-271 (466)
119 3s5w_A L-ornithine 5-monooxyge 83.6 2.3 7.8E-05 38.6 6.9 44 69-113 331-376 (463)
120 4a5l_A Thioredoxin reductase; 83.6 1.3 4.3E-05 37.8 4.9 38 270-307 275-314 (314)
121 3da1_A Glycerol-3-phosphate de 83.4 2.4 8.2E-05 39.9 7.1 58 57-114 170-232 (561)
122 2cul_A Glucose-inhibited divis 83.2 1.9 6.5E-05 35.3 5.7 33 271-304 198-231 (232)
123 1ebd_A E3BD, dihydrolipoamide 83.1 2.6 9E-05 38.3 7.1 47 66-114 223-270 (455)
124 1trb_A Thioredoxin reductase; 83.0 4.1 0.00014 34.6 8.0 55 59-113 186-246 (320)
125 3urh_A Dihydrolipoyl dehydroge 83.0 2.9 9.8E-05 38.4 7.4 46 67-113 252-299 (491)
126 3ic9_A Dihydrolipoamide dehydr 82.9 3.3 0.00011 38.1 7.8 44 69-113 229-273 (492)
127 2eq6_A Pyruvate dehydrogenase 82.9 2.9 0.0001 38.1 7.4 46 65-112 221-269 (464)
128 2e4g_A Tryptophan halogenase; 82.6 3 0.0001 39.1 7.4 43 68-114 209-252 (550)
129 1k0i_A P-hydroxybenzoate hydro 82.5 2.7 9.2E-05 37.1 6.8 56 58-114 104-163 (394)
130 3ntd_A FAD-dependent pyridine 82.0 3 0.0001 38.9 7.3 54 55-112 193-265 (565)
131 3i3l_A Alkylhalidase CMLS; fla 81.5 3.1 0.00011 39.4 7.1 56 58-114 129-188 (591)
132 2cdu_A NADPH oxidase; flavoenz 81.4 3.4 0.00012 37.5 7.2 55 56-114 193-247 (452)
133 2rgh_A Alpha-glycerophosphate 81.1 3 0.0001 39.3 6.8 57 58-114 189-250 (571)
134 1fl2_A Alkyl hydroperoxide red 81.0 2.7 9.3E-05 35.6 6.1 53 58-113 57-114 (310)
135 1v59_A Dihydrolipoamide dehydr 80.5 3.4 0.00012 37.7 6.9 46 66-113 236-286 (478)
136 2weu_A Tryptophan 5-halogenase 80.5 3.9 0.00013 37.7 7.3 52 59-114 175-230 (511)
137 3klj_A NAD(FAD)-dependent dehy 80.4 2.7 9.1E-05 37.5 6.0 41 66-112 74-114 (385)
138 3dgh_A TRXR-1, thioredoxin red 79.8 6 0.00021 36.2 8.4 46 67-112 240-287 (483)
139 1ojt_A Surface protein; redox- 79.3 2.1 7.1E-05 39.3 5.0 45 67-113 239-285 (482)
140 2i0z_A NAD(FAD)-utilizing dehy 79.3 1.3 4.3E-05 40.4 3.5 37 270-306 403-445 (447)
141 2qcu_A Aerobic glycerol-3-phos 79.2 3 0.0001 38.5 6.1 57 57-114 149-210 (501)
142 3dgz_A Thioredoxin reductase 2 79.1 5.9 0.0002 36.3 8.0 48 66-113 237-286 (488)
143 1zk7_A HGII, reductase, mercur 78.9 3.7 0.00013 37.4 6.5 42 67-113 229-270 (467)
144 1rp0_A ARA6, thiazole biosynth 78.7 3.7 0.00013 34.6 6.1 56 57-112 119-189 (284)
145 3fbs_A Oxidoreductase; structu 78.3 3.9 0.00014 34.1 6.2 53 57-113 56-111 (297)
146 3dk9_A Grase, GR, glutathione 77.7 6.5 0.00022 35.9 7.9 58 56-113 230-292 (478)
147 3f8d_A Thioredoxin reductase ( 77.7 4.5 0.00015 34.2 6.4 52 57-113 70-124 (323)
148 2aqj_A Tryptophan halogenase, 77.0 5.2 0.00018 37.2 7.1 53 58-114 166-222 (538)
149 3vrd_B FCCB subunit, flavocyto 76.9 0.78 2.7E-05 40.9 1.3 40 69-112 217-256 (401)
150 3itj_A Thioredoxin reductase 1 76.6 4 0.00014 34.8 5.8 52 58-112 85-140 (338)
151 2pyx_A Tryptophan halogenase; 76.5 5.8 0.0002 36.7 7.3 45 67-114 189-233 (526)
152 2gqw_A Ferredoxin reductase; f 76.4 6.5 0.00022 35.1 7.3 50 56-113 189-238 (408)
153 2q0l_A TRXR, thioredoxin reduc 76.0 4.5 0.00015 34.2 5.9 51 57-112 59-112 (311)
154 4b63_A L-ornithine N5 monooxyg 76.0 6.6 0.00022 36.2 7.4 56 57-112 148-212 (501)
155 3c4n_A Uncharacterized protein 75.8 1.5 5E-05 39.3 2.8 53 57-114 172-236 (405)
156 2q0l_A TRXR, thioredoxin reduc 75.8 5.2 0.00018 33.8 6.3 54 59-112 184-239 (311)
157 2bry_A NEDD9 interacting prote 75.0 3.8 0.00013 37.8 5.5 58 57-114 166-230 (497)
158 2q7v_A Thioredoxin reductase; 74.7 7.1 0.00024 33.2 6.9 55 58-113 192-248 (325)
159 3f8d_A Thioredoxin reductase ( 74.5 5.6 0.00019 33.6 6.1 54 58-112 194-249 (323)
160 3h8l_A NADH oxidase; membrane 74.4 4.2 0.00014 36.2 5.5 45 60-112 224-268 (409)
161 4g6h_A Rotenone-insensitive NA 74.4 7.7 0.00026 35.8 7.4 56 53-111 271-329 (502)
162 3alj_A 2-methyl-3-hydroxypyrid 74.4 6.1 0.00021 34.7 6.5 50 58-114 108-160 (379)
163 2cul_A Glucose-inhibited divis 74.3 2.6 8.9E-05 34.4 3.8 52 58-113 69-124 (232)
164 3fbs_A Oxidoreductase; structu 73.7 3.6 0.00012 34.4 4.7 38 270-307 256-294 (297)
165 3ab1_A Ferredoxin--NADP reduct 73.5 7.3 0.00025 33.8 6.8 46 68-113 216-262 (360)
166 3ics_A Coenzyme A-disulfide re 73.4 5 0.00017 37.8 6.0 51 56-112 230-280 (588)
167 4eqs_A Coenzyme A disulfide re 73.0 5.6 0.00019 36.0 6.0 52 61-113 64-115 (437)
168 1fl2_A Alkyl hydroperoxide red 72.9 4.2 0.00014 34.4 4.9 39 270-308 268-308 (310)
169 2gqf_A Hypothetical protein HI 72.6 1.8 6.1E-05 38.8 2.6 32 270-301 362-399 (401)
170 1vdc_A NTR, NADPH dependent th 72.3 9.2 0.00031 32.6 7.1 55 59-113 200-258 (333)
171 1coy_A Cholesterol oxidase; ox 72.1 6.6 0.00023 36.3 6.4 50 69-118 242-297 (507)
172 4b1b_A TRXR, thioredoxin reduc 72.0 8.1 0.00028 36.1 6.9 50 59-112 265-317 (542)
173 1n4w_A CHOD, cholesterol oxida 71.9 7 0.00024 36.1 6.5 50 69-118 237-292 (504)
174 3ntd_A FAD-dependent pyridine 71.8 6.1 0.00021 36.8 6.2 51 60-112 64-115 (565)
175 2e5v_A L-aspartate oxidase; ar 71.5 4.4 0.00015 37.1 5.0 54 58-114 120-176 (472)
176 1y56_A Hypothetical protein PH 71.4 12 0.00042 34.3 8.0 60 49-113 253-312 (493)
177 3cty_A Thioredoxin reductase; 71.3 13 0.00045 31.4 7.8 53 59-112 196-250 (319)
178 2wdq_A Succinate dehydrogenase 70.9 10 0.00035 35.8 7.5 58 57-114 143-206 (588)
179 3cty_A Thioredoxin reductase; 70.6 4.6 0.00016 34.4 4.7 37 270-306 279-317 (319)
180 3r9u_A Thioredoxin reductase; 69.7 5 0.00017 33.8 4.7 38 270-307 275-314 (315)
181 3hyw_A Sulfide-quinone reducta 69.3 6.1 0.00021 35.6 5.4 51 57-112 203-254 (430)
182 2ywl_A Thioredoxin reductase r 69.2 6.4 0.00022 30.3 4.9 38 270-307 134-173 (180)
183 1trb_A Thioredoxin reductase; 68.1 5.5 0.00019 33.8 4.6 37 270-306 277-315 (320)
184 1vdc_A NTR, NADPH dependent th 68.0 5.7 0.0002 33.9 4.7 50 58-113 71-123 (333)
185 2a87_A TRXR, TR, thioredoxin r 67.9 8.7 0.0003 32.9 5.9 54 59-113 196-251 (335)
186 1nhp_A NADH peroxidase; oxidor 67.6 10 0.00036 34.1 6.6 42 67-113 204-245 (447)
187 1chu_A Protein (L-aspartate ox 67.5 6.6 0.00023 36.6 5.4 56 59-114 144-208 (540)
188 2vdc_G Glutamate synthase [NAD 67.4 5.6 0.00019 36.3 4.7 37 270-306 408-445 (456)
189 4gcm_A TRXR, thioredoxin reduc 67.3 5.6 0.00019 33.7 4.5 37 270-306 269-307 (312)
190 1hyu_A AHPF, alkyl hydroperoxi 67.2 8.7 0.0003 35.6 6.1 53 58-113 268-325 (521)
191 2h88_A Succinate dehydrogenase 67.2 9.4 0.00032 36.4 6.4 58 57-114 155-217 (621)
192 2zxi_A TRNA uridine 5-carboxym 66.9 8.4 0.00029 36.8 5.9 53 58-114 124-180 (637)
193 3d1c_A Flavin-containing putat 66.6 8.9 0.0003 33.2 5.8 42 69-113 230-271 (369)
194 2a87_A TRXR, TR, thioredoxin r 66.2 10 0.00035 32.5 6.0 37 270-306 279-317 (335)
195 2bc0_A NADH oxidase; flavoprot 66.1 12 0.0004 34.3 6.7 42 67-113 249-290 (490)
196 3ics_A Coenzyme A-disulfide re 65.7 10 0.00035 35.6 6.3 51 60-112 99-150 (588)
197 3qfa_A Thioredoxin reductase 1 65.7 13 0.00044 34.4 6.9 47 67-113 263-314 (519)
198 3sx6_A Sulfide-quinone reducta 65.0 19 0.00064 32.3 7.8 52 57-111 211-266 (437)
199 3cgb_A Pyridine nucleotide-dis 64.9 15 0.00051 33.5 7.1 43 66-113 239-281 (480)
200 3k30_A Histamine dehydrogenase 64.1 13 0.00044 35.8 6.8 45 65-113 578-623 (690)
201 2bs2_A Quinol-fumarate reducta 63.8 19 0.00064 34.5 7.8 57 58-114 159-220 (660)
202 2zbw_A Thioredoxin reductase; 63.7 20 0.00069 30.4 7.5 55 58-113 192-251 (335)
203 3ces_A MNMG, tRNA uridine 5-ca 63.6 9.6 0.00033 36.5 5.6 52 59-114 126-181 (651)
204 1kf6_A Fumarate reductase flav 63.3 15 0.00051 34.8 6.9 58 57-114 134-197 (602)
205 3iwa_A FAD-dependent pyridine 62.9 8.5 0.00029 35.0 5.0 48 63-112 75-123 (472)
206 3v76_A Flavoprotein; structura 62.8 3.5 0.00012 37.2 2.3 30 270-299 381-416 (417)
207 3lzw_A Ferredoxin--NADP reduct 62.2 14 0.00048 31.2 6.1 53 59-113 195-249 (332)
208 3h28_A Sulfide-quinone reducta 61.9 10 0.00035 34.0 5.4 45 64-112 210-254 (430)
209 3oc4_A Oxidoreductase, pyridin 61.1 11 0.00038 34.0 5.5 44 66-112 70-113 (452)
210 2q7v_A Thioredoxin reductase; 61.1 9.4 0.00032 32.4 4.8 37 270-306 275-313 (325)
211 3nlc_A Uncharacterized protein 60.5 5.8 0.0002 37.2 3.5 38 270-307 507-545 (549)
212 4a9w_A Monooxygenase; baeyer-v 58.9 8.6 0.00029 32.9 4.2 37 270-306 313-353 (357)
213 2gjc_A Thiazole biosynthetic e 57.3 7.5 0.00026 33.8 3.4 36 270-305 282-325 (326)
214 4fk1_A Putative thioredoxin re 57.0 6.7 0.00023 33.2 3.1 38 270-307 263-302 (304)
215 1lvl_A Dihydrolipoamide dehydr 56.9 15 0.00051 33.2 5.6 42 67-113 225-267 (458)
216 3ef6_A Toluene 1,2-dioxygenase 56.6 16 0.00056 32.4 5.7 42 66-113 69-110 (410)
217 1jnr_A Adenylylsulfate reducta 56.2 33 0.0011 32.6 8.1 47 68-114 166-218 (643)
218 1q1r_A Putidaredoxin reductase 55.4 18 0.00063 32.4 5.9 42 65-112 71-112 (431)
219 3cgb_A Pyridine nucleotide-dis 55.4 19 0.00063 32.9 6.0 50 61-112 100-150 (480)
220 4fk1_A Putative thioredoxin re 54.5 29 0.001 29.0 6.8 39 71-112 77-115 (304)
221 3hyw_A Sulfide-quinone reducta 54.1 11 0.00037 33.9 4.1 37 70-113 72-108 (430)
222 4eqs_A Coenzyme A disulfide re 53.4 27 0.00092 31.3 6.7 49 56-112 190-238 (437)
223 2cdu_A NADPH oxidase; flavoenz 53.0 22 0.00074 32.0 6.0 46 65-112 69-115 (452)
224 3jsk_A Cypbp37 protein; octame 51.7 11 0.00039 32.9 3.6 36 271-306 293-336 (344)
225 2jbv_A Choline oxidase; alcoho 51.5 18 0.00063 33.6 5.3 50 69-118 224-277 (546)
226 3kd9_A Coenzyme A disulfide re 51.0 20 0.00069 32.2 5.4 39 69-112 204-242 (449)
227 1nhp_A NADH peroxidase; oxidor 50.2 28 0.00095 31.2 6.2 44 67-112 69-113 (447)
228 1xhc_A NADH oxidase /nitrite r 50.0 21 0.00072 31.2 5.2 49 55-112 184-232 (367)
229 3gyx_A Adenylylsulfate reducta 48.8 32 0.0011 32.9 6.6 55 59-113 172-232 (662)
230 2x8g_A Thioredoxin glutathione 48.7 43 0.0015 31.4 7.4 46 68-113 340-394 (598)
231 1ps9_A 2,4-dienoyl-COA reducta 48.6 29 0.00098 33.2 6.3 49 59-113 578-627 (671)
232 2bc0_A NADH oxidase; flavoprot 48.6 26 0.00091 31.9 5.8 45 65-112 103-147 (490)
233 1xhc_A NADH oxidase /nitrite r 48.3 25 0.00086 30.7 5.4 41 65-112 71-111 (367)
234 3lxd_A FAD-dependent pyridine 47.7 24 0.00082 31.3 5.3 42 65-112 76-117 (415)
235 3kd9_A Coenzyme A disulfide re 47.5 19 0.00063 32.4 4.6 43 65-112 70-112 (449)
236 3t37_A Probable dehydrogenase; 47.5 16 0.00055 33.6 4.2 50 70-119 227-276 (526)
237 3mfn_A Uncharacterized protein 46.2 12 0.0004 27.9 2.3 34 272-306 118-151 (157)
238 1hyu_A AHPF, alkyl hydroperoxi 46.0 21 0.0007 33.0 4.7 37 270-306 479-517 (521)
239 3pl8_A Pyranose 2-oxidase; sub 45.2 29 0.00099 32.9 5.7 50 69-118 275-328 (623)
240 1kdg_A CDH, cellobiose dehydro 45.1 16 0.00056 33.8 3.9 60 59-118 201-265 (546)
241 3cp8_A TRNA uridine 5-carboxym 44.8 23 0.00079 33.8 4.8 39 266-304 373-411 (641)
242 1m6i_A Programmed cell death p 44.7 17 0.00059 33.2 3.9 39 68-112 104-142 (493)
243 3h28_A Sulfide-quinone reducta 44.6 26 0.00091 31.2 5.1 37 270-306 285-334 (430)
244 2gqw_A Ferredoxin reductase; f 44.5 26 0.00089 31.1 5.0 39 68-112 73-111 (408)
245 3cp8_A TRNA uridine 5-carboxym 42.2 22 0.00074 34.0 4.2 39 70-113 134-173 (641)
246 3h8l_A NADH oxidase; membrane 41.6 26 0.00089 30.9 4.5 35 270-304 298-335 (409)
247 1qo8_A Flavocytochrome C3 fuma 40.6 11 0.00038 35.2 1.9 35 270-304 520-563 (566)
248 3sx6_A Sulfide-quinone reducta 39.8 32 0.0011 30.7 4.9 37 270-306 296-345 (437)
249 3vrd_B FCCB subunit, flavocyto 39.0 31 0.0011 30.2 4.6 36 270-305 285-324 (401)
250 1rp0_A ARA6, thiazole biosynth 38.9 20 0.00067 30.0 3.1 36 271-306 233-276 (284)
251 1y0p_A Fumarate reductase flav 38.1 12 0.00041 35.0 1.7 35 270-304 525-568 (571)
252 3k30_A Histamine dehydrogenase 37.8 12 0.00041 36.0 1.7 36 270-305 640-675 (690)
253 1cjc_A Protein (adrenodoxin re 37.7 19 0.00066 32.7 3.0 36 271-306 359-396 (460)
254 1d4d_A Flavocytochrome C fumar 36.8 12 0.00042 35.1 1.6 35 270-304 526-569 (572)
255 3lad_A Dihydrolipoamide dehydr 35.2 29 0.00098 31.4 3.8 34 270-303 309-343 (476)
256 2v3a_A Rubredoxin reductase; a 34.8 47 0.0016 28.9 5.1 45 61-112 67-111 (384)
257 2gag_A Heterotetrameric sarcos 34.6 34 0.0012 34.3 4.5 36 270-305 409-444 (965)
258 1chu_A Protein (L-aspartate ox 34.4 23 0.00077 33.0 3.0 35 270-304 366-410 (540)
259 3qvp_A Glucose oxidase; oxidor 34.4 50 0.0017 31.0 5.4 49 70-118 243-297 (583)
260 1y56_A Hypothetical protein PH 34.1 36 0.0012 31.1 4.3 55 57-113 161-218 (493)
261 1o94_A Tmadh, trimethylamine d 33.6 63 0.0022 31.2 6.1 43 68-113 585-645 (729)
262 1ju2_A HydroxynitrIle lyase; f 33.5 53 0.0018 30.4 5.4 50 69-118 209-265 (536)
263 3fg2_P Putative rubredoxin red 33.5 63 0.0021 28.4 5.7 40 66-112 69-108 (404)
264 1lqt_A FPRA; NADP+ derivative, 33.2 25 0.00085 31.9 3.0 37 270-306 350-388 (456)
265 1ebd_A E3BD, dihydrolipoamide 32.6 78 0.0027 28.3 6.3 33 270-302 299-332 (455)
266 1gte_A Dihydropyrimidine dehyd 31.8 43 0.0015 33.9 4.7 36 270-305 472-508 (1025)
267 4at0_A 3-ketosteroid-delta4-5a 31.6 17 0.00058 33.4 1.6 32 270-301 467-507 (510)
268 3ic9_A Dihydrolipoamide dehydr 31.4 42 0.0014 30.6 4.2 33 270-302 304-337 (492)
269 4dna_A Probable glutathione re 31.1 40 0.0014 30.3 4.0 34 270-303 297-331 (463)
270 2x3n_A Probable FAD-dependent 30.9 37 0.0013 29.7 3.7 33 272-304 286-324 (399)
271 3ces_A MNMG, tRNA uridine 5-ca 30.8 44 0.0015 32.0 4.3 39 265-303 378-416 (651)
272 2l5r_A Antimicrobial peptide a 30.4 26 0.00088 17.2 1.4 16 52-67 6-21 (26)
273 3urh_A Dihydrolipoyl dehydroge 29.7 29 0.00098 31.6 2.8 34 270-303 329-363 (491)
274 3o0h_A Glutathione reductase; 29.4 44 0.0015 30.3 4.0 34 270-303 317-351 (484)
275 3c4a_A Probable tryptophan hyd 29.2 43 0.0015 29.2 3.8 31 272-302 262-298 (381)
276 3q9t_A Choline dehydrogenase a 28.7 53 0.0018 30.8 4.5 49 70-118 222-274 (577)
277 4a5l_A Thioredoxin reductase; 28.7 1.1E+02 0.0038 25.2 6.3 51 58-112 67-119 (314)
278 3dk9_A Grase, GR, glutathione 28.3 48 0.0016 29.9 4.1 34 270-303 322-356 (478)
279 3l8k_A Dihydrolipoyl dehydroge 27.9 49 0.0017 29.8 4.0 34 270-303 299-333 (466)
280 1ges_A Glutathione reductase; 27.7 50 0.0017 29.6 4.0 33 270-302 294-327 (450)
281 2hqm_A GR, grase, glutathione 27.2 52 0.0018 29.8 4.1 33 270-302 313-346 (479)
282 1v59_A Dihydrolipoamide dehydr 27.1 55 0.0019 29.5 4.2 34 270-303 316-350 (478)
283 2gag_A Heterotetrameric sarcos 27.0 90 0.0031 31.3 6.0 47 66-112 328-381 (965)
284 2a8x_A Dihydrolipoyl dehydroge 26.9 53 0.0018 29.5 4.1 33 270-302 300-333 (464)
285 3c96_A Flavin-containing monoo 26.6 44 0.0015 29.4 3.4 31 272-302 303-339 (410)
286 2vou_A 2,6-dihydroxypyridine h 26.4 50 0.0017 28.8 3.7 31 272-302 299-335 (397)
287 2gv8_A Monooxygenase; FMO, FAD 26.1 54 0.0018 29.3 3.9 38 71-113 254-291 (447)
288 1kf6_A Fumarate reductase flav 25.6 43 0.0015 31.5 3.3 35 270-304 371-415 (602)
289 3g5s_A Methylenetetrahydrofola 25.3 50 0.0017 29.8 3.4 38 266-303 323-360 (443)
290 2r9z_A Glutathione amide reduc 25.3 58 0.002 29.3 4.0 33 270-302 293-326 (463)
291 1dxl_A Dihydrolipoamide dehydr 25.2 51 0.0018 29.6 3.6 33 270-302 308-341 (470)
292 1gpe_A Protein (glucose oxidas 25.1 53 0.0018 30.8 3.8 50 69-118 246-301 (587)
293 2bs2_A Quinol-fumarate reducta 24.6 51 0.0017 31.5 3.6 35 270-304 384-428 (660)
294 2zxi_A TRNA uridine 5-carboxym 24.4 63 0.0022 30.8 4.1 37 266-302 384-420 (637)
295 3dgh_A TRXR-1, thioredoxin red 24.0 69 0.0024 28.9 4.3 34 270-303 317-352 (483)
296 2wpf_A Trypanothione reductase 24.0 62 0.0021 29.5 4.0 33 270-302 321-354 (495)
297 3jsk_A Cypbp37 protein; octame 23.7 97 0.0033 26.9 4.9 28 57-84 160-191 (344)
298 1zmd_A Dihydrolipoyl dehydroge 23.7 55 0.0019 29.5 3.5 34 270-303 311-345 (474)
299 1k0i_A P-hydroxybenzoate hydro 23.7 61 0.0021 28.1 3.7 33 272-304 279-317 (394)
300 1fec_A Trypanothione reductase 23.6 64 0.0022 29.3 4.0 33 270-302 317-350 (490)
301 2xdo_A TETX2 protein; tetracyc 23.2 53 0.0018 28.7 3.2 30 273-302 315-350 (398)
302 2eq6_A Pyruvate dehydrogenase 23.0 60 0.002 29.2 3.6 33 270-302 300-333 (464)
303 2x8g_A Thioredoxin glutathione 22.8 75 0.0026 29.7 4.4 34 270-303 424-459 (598)
304 2yqu_A 2-oxoglutarate dehydrog 22.6 76 0.0026 28.4 4.2 34 270-303 293-327 (455)
305 2qae_A Lipoamide, dihydrolipoy 21.7 62 0.0021 29.1 3.4 33 270-302 305-339 (468)
306 3dgz_A Thioredoxin reductase 2 21.6 77 0.0026 28.7 4.1 34 270-303 317-352 (488)
307 2r0c_A REBC; flavin adenine di 21.4 55 0.0019 30.3 3.1 33 272-304 309-347 (549)
308 3qfa_A Thioredoxin reductase 1 21.3 77 0.0026 29.0 4.0 33 270-302 345-379 (519)
309 1o94_A Tmadh, trimethylamine d 21.3 30 0.001 33.4 1.3 35 270-304 665-699 (729)
310 1ojt_A Surface protein; redox- 21.3 65 0.0022 29.1 3.5 33 270-302 315-348 (482)
311 3klj_A NAD(FAD)-dependent dehy 21.2 54 0.0019 28.8 2.9 34 270-303 256-294 (385)
312 2xve_A Flavin-containing monoo 20.8 86 0.0029 28.2 4.2 33 270-302 306-338 (464)
313 2gjc_A Thiazole biosynthetic e 20.7 2.1E+02 0.007 24.6 6.4 27 58-84 147-177 (326)
314 3e1t_A Halogenase; flavoprotei 20.5 78 0.0027 28.9 3.9 33 272-304 296-334 (512)
315 1xdi_A RV3303C-LPDA; reductase 20.5 68 0.0023 29.1 3.5 33 270-302 308-341 (499)
316 1lvl_A Dihydrolipoamide dehydr 20.4 80 0.0027 28.3 3.9 33 270-302 296-329 (458)
No 1
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=291.44 Aligned_cols=282 Identities=26% Similarity=0.367 Sum_probs=229.8
Q ss_pred ccccchHHHHHHhcCcHHHHHHHhHhhhccCCCCCCCCCC---CCCCCceeeeccchhhHHHHHHHHHhc---cceeeCc
Q 021616 2 KAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPRL---PKPKGQTVGSFRKGLTMLPEAISKRLG---SKVKLSW 75 (310)
Q Consensus 2 ~~~~p~~~~~e~~~gs~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~gG~~~L~~~L~~~l~---~~i~~~~ 75 (310)
++++|.++++|+++||++.+++.....+. . .+..+ ....++.+++++|||++|+++|++.+. ++|++|+
T Consensus 181 ~~~~~~l~~~e~~~gsl~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~ 255 (477)
T 3nks_A 181 RSCFPSLFQAEQTHRSILLGLLLGAGRTP---Q--PDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQ 255 (477)
T ss_dssp HHHCHHHHHHHHHHSCHHHHHHHC--------C--CCCHHHHHHHHTTCSEEEETTCTTHHHHHHHHHHHHTTCEEECSC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHhccccc---C--CchhhhhhhcccCccEEEECCCHHHHHHHHHHHHHhcCCEEEeCC
Confidence 46789999999999999999986532110 0 00000 001234579999999999999999884 5899999
Q ss_pred eeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchHHHhccCCCCHHHHhhccCCCCCCEEEEEEEecCCccccccc
Q 021616 76 KLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSVDAAGALSQFYYPPVAAVSVSYPKEAIRTECL 155 (310)
Q Consensus 76 ~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~ 155 (310)
+|++|+.++++.|.|++ .++ ++.||+||+|+|++.+..|+++..+...+.+++++|.++.+|++.|++++|+
T Consensus 256 ~V~~i~~~~~~~~~v~~--~~~--~~~ad~vv~a~p~~~~~~ll~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~---- 327 (477)
T 3nks_A 256 PVCGLSLQAEGRWKVSL--RDS--SLEADHVISAIPASVLSELLPAEAAPLARALSAITAVSVAVVNLQYQGAHLP---- 327 (477)
T ss_dssp CCCEEEECGGGCEEEEC--SSC--EEEESEEEECSCHHHHHHHSCGGGHHHHHHHHTCCEEEEEEEEEEETTCCCS----
T ss_pred EEEEEEEcCCceEEEEE--CCe--EEEcCEEEECCCHHHHHHhccccCHHHHHHHhcCCCCcEEEEEEEECCCCCC----
Confidence 99999988764477753 344 6899999999999999999987777788889999999999999999988763
Q ss_pred cCCCcCcceEEecCCCCCceeEEEeccCCCCCCC-CCCcEEEEEEecCCCCCCC----CCCCHHHHHHHHHHHHHHHhCC
Q 021616 156 IDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRA-PAGRVLLLNYIGGATNLGI----LSKKESELVEAVDRDLRKMLIN 230 (310)
Q Consensus 156 ~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~p~~~-p~g~~~l~~~~~g~~~~~~----~~~~~eel~~~~~~~l~~~~~~ 230 (310)
.++||+++|..++..+++++|+|.++|++. +++..++++++++.+...+ ..++++++++.++++|++++|.
T Consensus 328 ----~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~ 403 (477)
T 3nks_A 328 ----VQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGL 403 (477)
T ss_dssp ----SCSSEEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHHCC
T ss_pred ----CCCceEEccCCCCCCceEEEEeccccCCCCCCCCceEEEEEECCccccccccccCCCCHHHHHHHHHHHHHHHhCC
Confidence 467899998877788899999999998643 3477889999987654322 3579999999999999999987
Q ss_pred CCCCCCcEEEEEecCCCCCCCCCChHHHHHHHHHHhhhcCCCCeEEeecccCCCchhHHHHHHHHHHHHHHHH
Q 021616 231 PNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNYVAGVALGRCVESAYEVASEVSNF 303 (310)
Q Consensus 231 ~~~~~p~~~~~~rw~~a~p~~~~g~~~~~~~~~~~~~~~~~~~l~~aG~~~~g~gv~~ai~sG~~aA~~i~~~ 303 (310)
. ..|.+..++||++++|+|++||..++..+++.+.. ..++|++||||+.|.||++|+.||+++|++|+..
T Consensus 404 ~--~~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~-~~~~l~l~G~~~~G~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 404 K--EMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTA-HRLPLTLAGASYEGVAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp C--SCCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHH-TTCSEEECSTTTSCCSHHHHHHHHHHHHHHHHHC
T ss_pred C--CCCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHh-cCCCEEEEccCCCCCcHHHHHHHHHHHHHHHHhc
Confidence 5 57889999999999999999999999888877764 3468999999999999999999999999999864
No 2
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=100.00 E-value=1.4e-36 Score=287.66 Aligned_cols=295 Identities=26% Similarity=0.452 Sum_probs=230.1
Q ss_pred ccccchHHHHHHhcCcHHHHHHHhHhhhccCCCCCCCCCCC-CCCCceeeeccchhhHHHHHHHHHhc-cceeeCceeee
Q 021616 2 KAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPRLP-KPKGQTVGSFRKGLTMLPEAISKRLG-SKVKLSWKLSG 79 (310)
Q Consensus 2 ~~~~p~~~~~e~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gG~~~L~~~L~~~l~-~~i~~~~~V~~ 79 (310)
+++||.+|++|+++||++.+++...+............... .......++++|||++|+++|++.++ .+|++|++|++
T Consensus 187 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~l~~~l~~~l~~~~i~~~~~V~~ 266 (504)
T 1sez_A 187 HHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICKDLREDELRLNSRVLE 266 (504)
T ss_dssp HHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEETTCTHHHHHHHHTTSCTTTEETTCCEEE
T ss_pred HHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceEeeCcHHHHHHHHHHhhcccceEEcCCeEEE
Confidence 35789999999999999999987654321110000000000 11223478999999999999999997 68999999999
Q ss_pred EEEcCCCc-----EEEEEECCCCe--EEEecCEEEEcCCchHHHhccC-----CCCHHHHhhccCCCCCCEEEEEEEecC
Q 021616 80 VKKLDSGE-----YSLTYETPEGL--VSLRSRSVVMTVPSYVASSLLR-----PLSVDAAGALSQFYYPPVAAVSVSYPK 147 (310)
Q Consensus 80 I~~~~~~~-----~~v~~~~~~g~--~~~~ad~VI~a~p~~~~~~ll~-----~~~~~~~~~l~~~~~~~~~~v~l~~~~ 147 (310)
|..++++. |.|++.+.+|. +++.||+||+|+|+..+.+++. +..+ ..+++++|.++.+|++.|++
T Consensus 267 I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~---~~l~~~~~~~~~~v~l~~~~ 343 (504)
T 1sez_A 267 LSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFLL---NFIPEVDYVPLSVVITTFKR 343 (504)
T ss_dssp EEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEESSSSBCCC---TTSCCCCEEEEEEEEEEEEG
T ss_pred EEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHHhhcccCCcccH---HHHhcCCCCceEEEEEEEch
Confidence 99887742 77877544552 3689999999999999999872 2222 23677888899999999998
Q ss_pred CccccccccCCCcCcceEEecCCCC---CceeEEEeccCCCCCCCCCCcEEEEEEecCCCCCCCCCCCHHHHHHHHHHHH
Q 021616 148 EAIRTECLIDGELKGFGQLHPRSQG---VETLGTIYSSSLFPNRAPAGRVLLLNYIGGATNLGILSKKESELVEAVDRDL 224 (310)
Q Consensus 148 ~~~~~~~~~~~~~~g~g~l~~~~~~---~~~~~~~~~s~~~p~~~p~g~~~l~~~~~g~~~~~~~~~~~eel~~~~~~~l 224 (310)
++|.. +..+|++++|..+. ..+++++|+|..+|..+|+|..++++|+++..+..+..++++++++.++++|
T Consensus 344 ~~~~~------~~~~~~~l~~~~~~~~g~~~~~~~~~s~~~~~~~p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L 417 (504)
T 1sez_A 344 ENVKY------PLEGFGVLVPSKEQQHGLKTLGTLFSSMMFPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDL 417 (504)
T ss_dssp GGBSS------CCCSSEEECCGGGGGGTCCSSEEEEHHHHCGGGSCTTEEEEEEEEESTTCGGGTTCCHHHHHHHHHHHH
T ss_pred hhcCC------CCCceEEEcCCCCCCCCCccceEEeeccccCCcCCCCCEEEEEEeCCCCcccccCCCHHHHHHHHHHHH
Confidence 87752 35678988876442 3577888988888877788888899999987776777889999999999999
Q ss_pred HHHhCCCCCCCCcEEEEEecCCCCCCCCCChHHHHHHHHHHhhhcCCCCeEEeecccCCCchhHHHHHHHHHHHHHHHHh
Q 021616 225 RKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNYVAGVALGRCVESAYEVASEVSNFL 304 (310)
Q Consensus 225 ~~~~~~~~~~~p~~~~~~rw~~a~p~~~~g~~~~~~~~~~~~~~~~~~~l~~aG~~~~g~gv~~ai~sG~~aA~~i~~~l 304 (310)
++++|.. ..|....+++|.+++|+|.+||...+..+..... +.+||||||+++.|.++++|+.||++||++|++.+
T Consensus 418 ~~~~g~~--~~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~--~~~~l~~aG~~~~g~~v~gai~sG~~aA~~il~~l 493 (504)
T 1sez_A 418 KQLLGAE--GEPTYVNHLYWSKAFPLYGHNYDSVLDAIDKMEK--NLPGLFYAGNHRGGLSVGKALSSGCNAADLVISYL 493 (504)
T ss_dssp HHHHCBC--SCCSSEEEEEEEEEEECCCTTHHHHHHHHHHHHH--HSTTEEECCSSSSCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCC--CCCeEEEEeECCCCCCccCcCHHHHHHHHHHHHH--hCCCEEEEeecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999874 4688899999999999999999887766655444 36899999999988899999999999999999988
Q ss_pred hhccc
Q 021616 305 SQYAY 309 (310)
Q Consensus 305 ~~~~~ 309 (310)
...+.
T Consensus 494 ~~~~~ 498 (504)
T 1sez_A 494 ESVST 498 (504)
T ss_dssp SSCC-
T ss_pred hhccc
Confidence 76554
No 3
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=100.00 E-value=6.3e-35 Score=274.34 Aligned_cols=283 Identities=22% Similarity=0.296 Sum_probs=230.0
Q ss_pred ccccchHHHHHHhcCcHHHHHHHhHhhhccCCCCCCCCCCCCCCCceeeeccchhhHHHHHHHHHhc-cceeeCceeeeE
Q 021616 2 KAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPRLPKPKGQTVGSFRKGLTMLPEAISKRLG-SKVKLSWKLSGV 80 (310)
Q Consensus 2 ~~~~p~~~~~e~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~L~~~L~~~l~-~~i~~~~~V~~I 80 (310)
+++||.|+++|+++||++.++......+. . . .+.......+..++++++||++|+++|++.+. ++|++|++|++|
T Consensus 185 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~-~--~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~~~i~~~~~V~~i 260 (475)
T 3lov_A 185 FATYPQFVANEQKAGSLFEGMRLMRPLDQ-L-P--QTPQTTIKATGQFLSLETGLESLIERLEEVLERSEIRLETPLLAI 260 (475)
T ss_dssp TTTCHHHHHHHHHHSSHHHHHHHTCC------------------CCSEEEETTCHHHHHHHHHHHCSSCEEESSCCCCEE
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHhccccc-c-c--ccccccccCCCcEEeeCChHHHHHHHHHhhccCCEEEcCCeeeEE
Confidence 46799999999999999999875420000 0 0 00000011234578999999999999999997 589999999999
Q ss_pred EEcCCCcEEEEEECCCCeEEEecCEEEEcCCchHHHhccCCCCHHHHhhccCCCCCCEEEEEEEecCCccccccccCCCc
Q 021616 81 KKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGEL 160 (310)
Q Consensus 81 ~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~ 160 (310)
+..+++ |.|++ .+| ++.||+||+|+|++++.+++.+.+ + +.+++++|.++.++++.|++++ .. +.
T Consensus 261 ~~~~~~-~~v~~--~~g--~~~ad~vV~a~p~~~~~~ll~~~~--~-~~~~~~~~~~~~~v~l~~~~~~-~~------~~ 325 (475)
T 3lov_A 261 SREDGR-YRLKT--DHG--PEYADYVLLTIPHPQVVQLLPDAH--L-PELEQLTTHSTATVTMIFDQQQ-SL------PI 325 (475)
T ss_dssp EEETTE-EEEEC--TTC--CEEESEEEECSCHHHHHHHCTTSC--C-HHHHTCCEEEEEEEEEEEECCS-SC------SS
T ss_pred EEeCCE-EEEEE--CCC--eEECCEEEECCCHHHHHHHcCccC--H-HHHhcCCCCeEEEEEEEECCcC-CC------CC
Confidence 998885 88774 677 589999999999999999986542 2 6678899999999999999875 21 35
Q ss_pred CcceEEecCCCCCceeEEEeccCCCCCCCCCCcEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEE
Q 021616 161 KGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLG 240 (310)
Q Consensus 161 ~g~g~l~~~~~~~~~~~~~~~s~~~p~~~p~g~~~l~~~~~g~~~~~~~~~~~eel~~~~~~~l~~~~~~~~~~~p~~~~ 240 (310)
.++|++++..+...+.+++|+|..|+...|+ ..++++++++..+..+..++++++++.++++|++++|.. ..|.+..
T Consensus 326 ~g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~-~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~L~~~~g~~--~~p~~~~ 402 (475)
T 3lov_A 326 EGTGFVVNRRAPYSITACTAIDQKWNHSAPD-HTVLRAFVGRPGNDHLVHESDEVLQQAVLQDLEKICGRT--LEPKQVI 402 (475)
T ss_dssp SSSEEEECTTSSCSEEEEEEHHHHCTTTCTT-EEEEEEEECBTTBCGGGGSCHHHHHHHHHHHHHHHHSSC--CCCSEEE
T ss_pred CCEEEEecCCCCCceEEEEEEcccCCCCCCC-cEEEEEEeCCCCCCcccCCCHHHHHHHHHHHHHHHhCCC--CCCeEEE
Confidence 6789999888777888999999989887776 678889998877777778899999999999999999975 4789999
Q ss_pred EEecCCCCCCCCCChHHHHHHHHHHhhhcCCCCeEEeecccCCCchhHHHHHHHHHHHHHHHHhhhc
Q 021616 241 VRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNYVAGVALGRCVESAYEVASEVSNFLSQY 307 (310)
Q Consensus 241 ~~rw~~a~p~~~~g~~~~~~~~~~~~~~~~~~~l~~aG~~~~g~gv~~ai~sG~~aA~~i~~~l~~~ 307 (310)
+++|.+++|+|.+||...+..+++.+.. +.+||||||+++.|.+|++|+.||+++|++|++.+...
T Consensus 403 v~~w~~a~p~~~~g~~~~~~~~~~~l~~-~~~~l~~aG~~~~g~g~~~a~~sG~~aA~~i~~~l~~~ 468 (475)
T 3lov_A 403 ISRLMDGLPAYTVGHADRIQRVREEVLA-QYPGIYLAGLAYDGVGLPDCVASAKTMIESIELEQSHT 468 (475)
T ss_dssp EEEEEEEEECCCTTHHHHHHHHHHHHHH-HSTTEEECSTTTSCSSHHHHHHHHHHHHHHHHHTC---
T ss_pred EEEcccCCCCCCCChHHHHHHHHHHHHh-hCCCEEEEccCCCCCCHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999888888776654 46899999999999999999999999999999887553
No 4
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=100.00 E-value=2e-35 Score=276.73 Aligned_cols=280 Identities=26% Similarity=0.476 Sum_probs=217.4
Q ss_pred cccchHHHHHHhcCcHHHHHHHhHhhhccCCCCCCCCCCCCCCCceeeeccchhhHHHHHHHHHhc-cceeeCceeeeEE
Q 021616 3 AAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPRLPKPKGQTVGSFRKGLTMLPEAISKRLG-SKVKLSWKLSGVK 81 (310)
Q Consensus 3 ~~~p~~~~~e~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~L~~~L~~~l~-~~i~~~~~V~~I~ 81 (310)
.++|.+.++++++|+++.++.+...... . ..........++++++|++.|++.|++.+. ++|+++++|++|+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~i~~~~~V~~i~ 260 (470)
T 3i6d_A 188 STFPQFYQTEQKHRSLILGMKKTRPQGS-G------QQLTAKKQGQFQTLSTGLQTLVEEIEKQLKLTKVYKGTKVTKLS 260 (470)
T ss_dssp HHCGGGCC--------------------------------------EEEETTCTHHHHHHHHHTCCSEEEECSCCEEEEE
T ss_pred HHHHHHHHHHHhcCcHHHHHHhhccccc-c------ccccccCCceEEEeCChHHHHHHHHHHhcCCCEEEeCCceEEEE
Confidence 4678888899999999999875421100 0 000111234578999999999999999987 5899999999999
Q ss_pred EcCCCcEEEEEECCCCeEEEecCEEEEcCCchHHHhccCCCCHHHHhhccCCCCCCEEEEEEEecCCccccccccCCCcC
Q 021616 82 KLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELK 161 (310)
Q Consensus 82 ~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~ 161 (310)
.++++ |.|++ .+| +++.||+||+|+|++++.+++.+. ...++++.++|.++.++++.|++++|.. +..
T Consensus 261 ~~~~~-~~v~~--~~g-~~~~ad~vi~a~p~~~~~~l~~~~--~~~~~~~~~~~~~~~~v~l~~~~~~~~~------~~~ 328 (470)
T 3i6d_A 261 HSGSC-YSLEL--DNG-VTLDADSVIVTAPHKAAAGMLSEL--PAISHLKNMHSTSVANVALGFPEGSVQM------EHE 328 (470)
T ss_dssp ECSSS-EEEEE--SSS-CEEEESEEEECSCHHHHHHHTTTS--TTHHHHHTCEEEEEEEEEEEESSTTCCC------SSC
T ss_pred EcCCe-EEEEE--CCC-CEEECCEEEECCCHHHHHHHcCCc--hhhHHHhcCCCCceEEEEEEECchhcCC------CCC
Confidence 99886 88876 677 479999999999999999988653 2456788999999999999999988752 346
Q ss_pred cceEEecCCCCCceeEEEeccCCCCCCCCCCcEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEE
Q 021616 162 GFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGV 241 (310)
Q Consensus 162 g~g~l~~~~~~~~~~~~~~~s~~~p~~~p~g~~~l~~~~~g~~~~~~~~~~~eel~~~~~~~l~~~~~~~~~~~p~~~~~ 241 (310)
++|++++..+...+.+++|+|..++...|+|..++++++++.++..+..++++++++.++++|++++|.. ..|....+
T Consensus 329 ~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~--~~p~~~~~ 406 (470)
T 3i6d_A 329 GTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKVMNIN--GEPEMTCV 406 (470)
T ss_dssp SSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEEEEEECCSSCCGGGTSCHHHHHHHHHHHHGGGSCCC--SCCSEEEE
T ss_pred CeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEEEEEECCCCCccccCCCHHHHHHHHHHHHHHHhCCC--CCceEEEE
Confidence 7899998877777888999998888777888888999998887777788999999999999999999875 47889999
Q ss_pred EecCCCCCCCCCChHHHHHHHHHHhhhcCCCCeEEeecccCCCchhHHHHHHHHHHHHHHHHh
Q 021616 242 RVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNYVAGVALGRCVESAYEVASEVSNFL 304 (310)
Q Consensus 242 ~rw~~a~p~~~~g~~~~~~~~~~~~~~~~~~~l~~aG~~~~g~gv~~ai~sG~~aA~~i~~~l 304 (310)
++|.+++|+|.+|+...+..+++.+.+ +.+||+|||+|+.|.++++|+.||+++|++|++.+
T Consensus 407 ~~w~~a~p~~~~g~~~~~~~~~~~l~~-~~~~l~~aG~~~~g~gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 407 TRWHESMPQYHVGHKQRIKELREALAS-AYPGVYMTGASFEGVGIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp EEEEEEEEECBTTHHHHHHHHHHHHHH-HSTTEEECSTTTSCCSHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCCccCCCCCCHHHHHHHHHHHHHh-hCCCEEEEeecCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999888888777655 45899999999999999999999999999999876
No 5
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=100.00 E-value=8.2e-33 Score=260.04 Aligned_cols=285 Identities=29% Similarity=0.480 Sum_probs=223.8
Q ss_pred cccchHHHHHHhcCcHHHHHHHhHh-hhccCCCCCCCCCCCCCCC----ceeeeccchhhHHHHHHHHHhccceeeCcee
Q 021616 3 AAFGKVWKLEQTGGSIIGGTFKAIQ-EKNKAPKQPRDPRLPKPKG----QTVGSFRKGLTMLPEAISKRLGSKVKLSWKL 77 (310)
Q Consensus 3 ~~~p~~~~~e~~~gs~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~gG~~~L~~~L~~~l~~~i~~~~~V 77 (310)
.+++.++.+|++|||++.+++.... ..+..+. ...+ ...++++||+++|+++|++.++++|+++++|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V 258 (478)
T 2ivd_A 187 ATFPMLVKMEREHRSLILGAIRAQKAQRQAALP--------AGTAPKLSGALSTFDGGLQVLIDALAASLGDAAHVGARV 258 (478)
T ss_dssp HHCHHHHHHHHHHSSHHHHHHHHHHHHTCC------------CCSCCCCCCEEEETTCTHHHHHHHHHHHGGGEESSEEE
T ss_pred HHhHHHHHHHHhcCcHHHHHHHhhhccccccCc--------ccccccccccEEEECCCHHHHHHHHHHHhhhhEEcCCEE
Confidence 4678889999999999999875421 1000000 0011 3578999999999999999998899999999
Q ss_pred eeEEEcCCCcEEEEEEC-CCCeEEEecCEEEEcCCchHHHhccCCCCHHHHhhccCCCCCCEEEEEEEecCCcccccccc
Q 021616 78 SGVKKLDSGEYSLTYET-PEGLVSLRSRSVVMTVPSYVASSLLRPLSVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLI 156 (310)
Q Consensus 78 ~~I~~~~~~~~~v~~~~-~~g~~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~ 156 (310)
++|..++++ |.|++.+ .+| +++.||+||+|+|+..+.+|+++.++...+.+++++|.++.++++.|++++|..
T Consensus 259 ~~i~~~~~~-~~v~~~~~~~g-~~~~ad~vV~a~~~~~~~~ll~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~---- 332 (478)
T 2ivd_A 259 EGLAREDGG-WRLIIEEHGRR-AELSVAQVVLAAPAHATAKLLRPLDDALAALVAGIAYAPIAVVHLGFDAGTLPA---- 332 (478)
T ss_dssp EEEECC--C-CEEEEEETTEE-EEEECSEEEECSCHHHHHHHHTTTCHHHHHHHHTCCBCCEEEEEEEECTTSSCC----
T ss_pred EEEEecCCe-EEEEEeecCCC-ceEEcCEEEECCCHHHHHHHhhccCHHHHHHHhcCCCCcEEEEEEEEccccCCC----
Confidence 999988876 8887522 345 479999999999999999998877777778889999999999999999876641
Q ss_pred CCCcCcceEEecCCCCCceeEEEeccCCCCCCCCCCcEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCC
Q 021616 157 DGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGATNLGILSKKESELVEAVDRDLRKMLINPNAKDP 236 (310)
Q Consensus 157 ~~~~~g~g~l~~~~~~~~~~~~~~~s~~~p~~~p~g~~~l~~~~~g~~~~~~~~~~~eel~~~~~~~l~~~~~~~~~~~p 236 (310)
+ ++|++++|..++.+..+++|++..+|.++|+|..++++++++.++..+...+++++.+.++++|++++|.. ..|
T Consensus 333 --~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~p 407 (478)
T 2ivd_A 333 --P-DGFGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSCMVGGARQPGLVEQDEDALAALAREELKALAGVT--ARP 407 (478)
T ss_dssp --C-CSSEEECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEEEEEECTTCGGGGGSCHHHHHHHHHHHHHHHHCCC--SCC
T ss_pred --C-CceEEEecCCCCCceEEEEEEcccCCCcCCCCCEEEEEEeCCcCCccccCCCHHHHHHHHHHHHHHHhCCC--CCC
Confidence 1 45787776544556778899988777767778788999998876666667899999999999999999875 368
Q ss_pred cEEEEEecCCCCCCCCCChHHHHHHHHHHhhhcCCCCeEEeecccCCCchhHHHHHHHHHHHHHHHHhhhcc
Q 021616 237 LVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNYVAGVALGRCVESAYEVASEVSNFLSQYA 308 (310)
Q Consensus 237 ~~~~~~rw~~a~p~~~~g~~~~~~~~~~~~~~~~~~~l~~aG~~~~g~gv~~ai~sG~~aA~~i~~~l~~~~ 308 (310)
....+++|.+++|.|.+|+......+++.+.. .+||||||+++.|.|+++|+.||+++|++|++.+.+++
T Consensus 408 ~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~--~~~l~~aG~~~~g~gv~gA~~SG~~aA~~i~~~l~~~~ 477 (478)
T 2ivd_A 408 SFTRVFRWPLGIPQYNLGHLERVAAIDAALQR--LPGLHLIGNAYKGVGLNDCIRNAAQLADALVAGNTSHA 477 (478)
T ss_dssp SEEEEEEESSCCBCCBTTHHHHHHHHHHHHHT--STTEEECSTTTSCCSHHHHHHHHHHHHHHHCC------
T ss_pred cEEEEEECCCcccCCCcCHHHHHHHHHHHHhh--CCCEEEEccCCCCCCHHHHHHHHHHHHHHHHHhhccCC
Confidence 88889999999999999998776666655542 57999999998888899999999999999998876653
No 6
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.97 E-value=1.8e-30 Score=234.00 Aligned_cols=234 Identities=15% Similarity=0.149 Sum_probs=183.0
Q ss_pred ceeeeccchhhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchHHHhccCCC----
Q 021616 47 QTVGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPL---- 122 (310)
Q Consensus 47 ~~~~~~~gG~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~---- 122 (310)
...|...+||++++++|++.++.+|+++++|++|+.++++ |.|++ .+| +++.||+||+|+|++.+.+|+.+.
T Consensus 102 ~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~-~~v~~--~~g-~~~~ad~vV~A~p~~~~~~ll~~~~~~l 177 (342)
T 3qj4_A 102 DCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDK-WEVSK--QTG-SPEQFDLIVLTMPVPEILQLQGDITTLI 177 (342)
T ss_dssp CEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSS-EEEEE--SSS-CCEEESEEEECSCHHHHTTCBSTHHHHS
T ss_pred ccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCE-EEEEE--CCC-CEEEcCEEEECCCHHHHHHHhccccccc
Confidence 3468899999999999999888899999999999998886 98886 567 357999999999999999998642
Q ss_pred CHHHHhhccCCCCCCEEEEEEEecCCccccccccCCCcCcceEEecCCCCCceeEEE-eccCCCCCCC-CCCcEEEEEEe
Q 021616 123 SVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTI-YSSSLFPNRA-PAGRVLLLNYI 200 (310)
Q Consensus 123 ~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~~~~~~~~~~-~~s~~~p~~~-p~g~~~l~~~~ 200 (310)
+++..+.+++++|.++.+|++.|+++++. +...+|++++.. +.++++ +++++ |++. +++...+.+++
T Consensus 178 ~~~~~~~l~~~~~~~~~~v~l~~~~~~~~-------~~~~~g~~~~~~---~~~~~~~~~~~k-~~r~~~~~~~~~v~~~ 246 (342)
T 3qj4_A 178 SECQRQQLEAVSYSSRYALGLFYEAGTKI-------DVPWAGQYITSN---PCIRFVSIDNKK-RNIESSEIGPSLVIHT 246 (342)
T ss_dssp CHHHHHHHHTCCBCCEEEEEEECSSCC---------CCSCSEEECSSC---SSEEEEEEHHHH-TTCCCC-CCCEEEEEE
T ss_pred CHHHHHHHhcCCccccEEEEEEECCCCcc-------CCceeeEEccCC---cceEEEEccccC-CCCCCCCCCceEEEEC
Confidence 33567889999999999999999986543 123457777642 234554 55554 6543 33334677888
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCChHHHHHHHHHHhhhcCCCCeEEeecc
Q 021616 201 GGATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNY 280 (310)
Q Consensus 201 ~g~~~~~~~~~~~eel~~~~~~~l~~~~~~~~~~~p~~~~~~rw~~a~p~~~~g~~~~~~~~~~~~~~~~~~~l~~aG~~ 280 (310)
++.++.++.+++++++.+.++++|++++|.. ..|.+++++||++++|+|.... +. ..+.....++|++||||
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~--~~p~~~~v~rW~~a~p~~~~~~--~~----~~~~~~~~~~l~laGd~ 318 (342)
T 3qj4_A 247 TVPFGVTYLEHSIEDVQELVFQQLENILPGL--PQPIATKCQKWRHSQVTNAAAN--CP----GQMTLHHKPFLACGGDG 318 (342)
T ss_dssp CHHHHHHTTTSCHHHHHHHHHHHHHHHSCSC--CCCSEEEEEEETTCSBSSCCSS--SC----SCEEEETTTEEEECSGG
T ss_pred CHHHHHHhhcCCHHHHHHHHHHHHHHhccCC--CCCceeeeccccccccccccCC--Cc----ceeEecCCccEEEEccc
Confidence 8777777888999999999999999999854 5799999999999999995420 00 01210135899999999
Q ss_pred cCCCchhHHHHHHHHHHHHHHHH
Q 021616 281 VAGVALGRCVESAYEVASEVSNF 303 (310)
Q Consensus 281 ~~g~gv~~ai~sG~~aA~~i~~~ 303 (310)
+.|++||+|+.||+++|++|++.
T Consensus 319 ~~g~~v~~ai~sg~~aa~~i~~~ 341 (342)
T 3qj4_A 319 FTQSNFDGCITSALCVLEALKNY 341 (342)
T ss_dssp GSCSSHHHHHHHHHHHHHHHTTC
T ss_pred cCCCCccHHHHHHHHHHHHHHhh
Confidence 99999999999999999999764
No 7
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.95 E-value=1.2e-26 Score=218.42 Aligned_cols=235 Identities=13% Similarity=0.109 Sum_probs=188.2
Q ss_pred ceeeeccchhhHHHHHHHHHhcc-ceeeC--ceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchHHHhccCC--
Q 021616 47 QTVGSFRKGLTMLPEAISKRLGS-KVKLS--WKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRP-- 121 (310)
Q Consensus 47 ~~~~~~~gG~~~L~~~L~~~l~~-~i~~~--~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~-- 121 (310)
.+.|.+.||+++|+++|++.++. +|+++ ++|++|+..+++ |. + .+| +++.||+||+|+|++.+.+++.+
T Consensus 206 ~f~yp~~gG~~~l~~~la~~l~~~~i~~~~~~~V~~I~~~~~~-v~--~--~~G-~~~~ad~VI~a~p~~~~~~ll~~~~ 279 (484)
T 4dsg_A 206 TFRFPQRGGTGIIYQAIKEKLPSEKLTFNSGFQAIAIDADAKT-IT--F--SNG-EVVSYDYLISTVPFDNLLRMTKGTG 279 (484)
T ss_dssp EEEEESSSCTHHHHHHHHHHSCGGGEEECGGGCEEEEETTTTE-EE--E--TTS-CEEECSEEEECSCHHHHHHHEECSS
T ss_pred eEEeecCCCHHHHHHHHHhhhhhCeEEECCCceeEEEEecCCE-EE--E--CCC-CEEECCEEEECCCHHHHHHHhhccC
Confidence 34567789999999999999976 89999 569999987764 54 3 467 47999999999999999999854
Q ss_pred --CCHHHHhhccCCCCCCEEEEEEEecCCccccccccCCCcCcceEEecCCCCCceeEEEeccCCCCCCCCCCcEEEEEE
Q 021616 122 --LSVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNY 199 (310)
Q Consensus 122 --~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~p~~~p~g~~~l~~~ 199 (310)
.+++..+.++.++|.++.+|+++|+.+.... ..+++++++|..+. ++..+++.++.+|..+|+|++++.+.
T Consensus 280 ~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~------~~~~~~i~vp~~~~-~~~ri~~~s~~~p~~ap~g~~~l~~e 352 (484)
T 4dsg_A 280 FKGYDEWPAIADKMVYSSTNVIGIGVKGTPPPH------LKTACWLYFPEDTS-PFYRATVFSNYSKYNVPEGHWSLMLE 352 (484)
T ss_dssp CTTGGGHHHHHHHCCEEEEEEEEEEEESCCCGG------GTTCCEEECCSTTC-SCSEEECGGGTCGGGSCTTEEEEEEE
T ss_pred CCCCHHHHHHHhCCCcCceEEEEEEEcCCCccc------CCCCeEEEEEcCCC-eEEEEEeecCCCcccCCCCeEEEEEE
Confidence 5566778889999999999999999863210 13468888886543 45566777777888788888877776
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCC-cEEEEEecCCCCCCCCCChHHHHHHHHHHhhhcCCCCeEEee
Q 021616 200 IGGATNLGILSKKESELVEAVDRDLRKMLINPNAKDP-LVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGG 278 (310)
Q Consensus 200 ~~g~~~~~~~~~~~eel~~~~~~~l~~~~~~~~~~~p-~~~~~~rw~~a~p~~~~g~~~~~~~~~~~~~~~~~~~l~~aG 278 (310)
++.. ..+..+||++++.++++|.++.+.. ...+ ....++||+.++|+|.+||..+++++++.+.. . ||+++|
T Consensus 353 ~~~~---~~~~~~d~~l~~~a~~~L~~~~~~~-~~~~~~~~~v~r~~~~yP~y~~~~~~~~~~~~~~l~~--~-~l~~~G 425 (484)
T 4dsg_A 353 VSES---KYKPVNHSTLIEDCIVGCLASNLLL-PEDLLVSKWHYRIEKGYPTPFIGRNNLLEKAQPELMS--R-CIYSRG 425 (484)
T ss_dssp EEEB---TTBCCCTTSHHHHHHHHHHHTTSCC-TTCCEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHH--T-TEEECS
T ss_pred EecC---cCCcCCHHHHHHHHHHHHHHcCCCC-ccceEEEEEEEEeCccccCCCccHHHHHHHHHHHHHh--C-CcEeec
Confidence 6533 3456799999999999999986554 2334 34578999999999999999999999998886 3 999999
Q ss_pred c---ccCCC-chhHHHHHHHHHHHHHH
Q 021616 279 N---YVAGV-ALGRCVESAYEVASEVS 301 (310)
Q Consensus 279 ~---~~~g~-gv~~ai~sG~~aA~~i~ 301 (310)
. |..|+ ++++||.+|++||++|+
T Consensus 426 r~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 426 RFGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp TTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred CCcccccCCCChHHHHHHHHHHHHHHH
Confidence 8 44454 79999999999999998
No 8
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.94 E-value=1.2e-25 Score=211.88 Aligned_cols=245 Identities=13% Similarity=0.164 Sum_probs=181.6
Q ss_pred ceeeeccchhhHHHHHHHHHhc-cceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchHHHhccCCCCHH
Q 021616 47 QTVGSFRKGLTMLPEAISKRLG-SKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSVD 125 (310)
Q Consensus 47 ~~~~~~~gG~~~L~~~L~~~l~-~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~~~~ 125 (310)
..+++++||+++|+++|++.++ ++|++|++|++|+..+++ |.|++.+.++.+++.||+||+|+|+.++..+..+.++.
T Consensus 229 ~~~~~~~gG~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~-v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~~l~~~ 307 (489)
T 2jae_A 229 MMMFTPVGGMDRIYYAFQDRIGTDNIVFGAEVTSMKNVSEG-VTVEYTAGGSKKSITADYAICTIPPHLVGRLQNNLPGD 307 (489)
T ss_dssp SSEEEETTCTTHHHHHHHHHHCGGGEETTCEEEEEEEETTE-EEEEEEETTEEEEEEESEEEECSCHHHHTTSEECCCHH
T ss_pred ccEEeecCCHHHHHHHHHHhcCCCeEEECCEEEEEEEcCCe-EEEEEecCCeEEEEECCEEEECCCHHHHHhCccCCCHH
Confidence 4578999999999999999998 789999999999998886 88876422112478999999999999998887666667
Q ss_pred HHhhccCCCCCCEEEEEEEecCCccccccccCCCcCcceEEecCCCCCceeEEEeccCCCCCCCCCCcEEEEEEecCCCC
Q 021616 126 AAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGATN 205 (310)
Q Consensus 126 ~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~p~~~p~g~~~l~~~~~g~~~ 205 (310)
..+++++++|.++.+|++.|++++|.. ....||.+... +.++..+.++|..++ .|+ ..++.+|+++..+
T Consensus 308 ~~~~l~~~~~~~~~kv~l~~~~~~w~~------~~~~~g~~~~~--~~~~~~~~~~s~~~~--~~~-~~l~~~~~~g~~~ 376 (489)
T 2jae_A 308 VLTALKAAKPSSSGKLGIEYSRRWWET------EDRIYGGASNT--DKDISQIMFPYDHYN--SDR-GVVVAYYSSGKRQ 376 (489)
T ss_dssp HHHHHHTEECCCEEEEEEEESSCHHHH------TTCCCSCEEEE--SSTTCEEECCSSSTT--SSC-EEEEEEEEETHHH
T ss_pred HHHHHHhCCCccceEEEEEeCCCCccC------CCCcccccccC--CCCceEEEeCCCCCC--CCC-CEEEEEeeCCchh
Confidence 788889999999999999999988752 12345433322 234566777776543 232 3566678877655
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCC-CCCCCCcEEEEEecCCCCCCCCCCh-----------HHHHHHHHHHhhhcCCCC
Q 021616 206 LGILSKKESELVEAVDRDLRKMLIN-PNAKDPLVLGVRVWQQAIPQFLVGH-----------LDLLDAAKSSLRDNGYQG 273 (310)
Q Consensus 206 ~~~~~~~~eel~~~~~~~l~~~~~~-~~~~~p~~~~~~rw~~a~p~~~~g~-----------~~~~~~~~~~~~~~~~~~ 273 (310)
..+..++++++++.++++|++++|. . ...|.....++|... | |..|. ......+.+.+.. +.++
T Consensus 377 ~~~~~~~~~~~~~~~l~~L~~~~~~~~-~~~~~~~~~~~W~~~-~-~~~G~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~ 452 (489)
T 2jae_A 377 EAFESLTHRQRLAKAIAEGSEIHGEKY-TRDISSSFSGSWRRT-K-YSESAWANWAGSGGSHGGAATPEYEKLLE-PVDK 452 (489)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHHCGGG-GSSEEEEEEEEGGGS-T-TTSCSSCEETTC-------CCHHHHHHTS-CBTT
T ss_pred hhhhcCCHHHHHHHHHHHHHHHcCcch-hhhccccEEEEcCCC-C-CCCCcchhcccccCCCcccchhhHHHHhC-CCCc
Confidence 5566789999999999999999986 3 246777778899753 2 22221 1111123344544 5689
Q ss_pred eEEeeccc--CCCchhHHHHHHHHHHHHHHHHhhhc
Q 021616 274 LFLGGNYV--AGVALGRCVESAYEVASEVSNFLSQY 307 (310)
Q Consensus 274 l~~aG~~~--~g~gv~~ai~sG~~aA~~i~~~l~~~ 307 (310)
|||||+++ .+.++++|+.||+++|++|++.+.+-
T Consensus 453 l~faG~~~~~~~~~v~gAi~sg~~aA~~i~~~l~~~ 488 (489)
T 2jae_A 453 IYFAGDHLSNAIAWQHGALTSARDVVTHIHERVAQE 488 (489)
T ss_dssp EEECSGGGBSSTTSHHHHHHHHHHHHHHHHHHHHC-
T ss_pred EEEeEHHhccCccHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999986 37789999999999999999887653
No 9
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.94 E-value=1.3e-25 Score=218.90 Aligned_cols=239 Identities=15% Similarity=0.206 Sum_probs=183.7
Q ss_pred eeeeccchhhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEEC----CCCeEEEecCEEEEcCCchHHHhc-----
Q 021616 48 TVGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYET----PEGLVSLRSRSVVMTVPSYVASSL----- 118 (310)
Q Consensus 48 ~~~~~~gG~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~----~~g~~~~~ad~VI~a~p~~~~~~l----- 118 (310)
..++++|||++|+++|++.+ +|++|++|++|++++++ +.|++.+ .+| .+++||+||+|+|+.++.++
T Consensus 392 ~~~~~~gG~~~l~~~La~~l--~I~l~~~V~~I~~~~~~-v~V~~~~~~~~~~~-~~~~Ad~VI~tvP~~vL~~l~~~i~ 467 (662)
T 2z3y_A 392 SHLTVRNGYSCVPVALAEGL--DIKLNTAVRQVRYTASG-CEVIAVNTRSTSQT-FIYKCDAVLCTLPLGVLKQQPPAVQ 467 (662)
T ss_dssp CCEEETTCTTHHHHHHTTTC--EEETTEEEEEEEEETTE-EEEEEEESSCTTCE-EEEEESEEEECCCHHHHHCSSCSSE
T ss_pred ceeeecCcHHHHHHHHHhcC--ceecCCeEEEEEECCCc-EEEEEeecccCCCC-eEEEeCEEEECCCHHHHhcccCceE
Confidence 35899999999999999987 89999999999999886 8888743 113 57999999999999999873
Q ss_pred -cCCCCHHHHhhccCCCCCCEEEEEEEecCCccccccccCCCcCcceEEecCCCCCceeEEEeccCCCCCCCCCCcEEEE
Q 021616 119 -LRPLSVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLL 197 (310)
Q Consensus 119 -l~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~p~~~p~g~~~l~ 197 (310)
.+++++...++++++.|.++.+|+|.|++++|.. +..+||++.+.......+.++|++. . ..+|.
T Consensus 468 f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~------~~~~~G~l~~~~~~~~~~~~~~~~~----~----~~vL~ 533 (662)
T 2z3y_A 468 FVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDP------SVNLFGHVGSTTASRGELFLFWNLY----K----APILL 533 (662)
T ss_dssp EESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCT------TCSEEEECCSSSTTTTEEEEEECCS----S----SSEEE
T ss_pred EcCCCCHHHHHHHHhCCccceeEEEEEcCcccccC------CCCceeeecCCCCCCCceeEEEeCC----C----CCEEE
Confidence 3556666778889999999999999999999862 2456888777655556667777653 1 12666
Q ss_pred EEecCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCC------CCCCCCCChHHH-HHHHHHHh----
Q 021616 198 NYIGGATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQ------AIPQFLVGHLDL-LDAAKSSL---- 266 (310)
Q Consensus 198 ~~~~g~~~~~~~~~~~eel~~~~~~~l~~~~~~~~~~~p~~~~~~rw~~------a~p~~~~g~~~~-~~~~~~~~---- 266 (310)
+|++|..+..+..++++++++.++++|++++|......|..+.+++|.. ++..+.+|.... ...+...+
T Consensus 534 ~~~~G~~a~~~~~lsdee~~~~~l~~L~~~~g~~~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~ 613 (662)
T 2z3y_A 534 ALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGP 613 (662)
T ss_dssp EEECTHHHHHHTTSCHHHHHHHHHHHHHHHHCTTSSCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC--
T ss_pred EEeccHhHHHHHhCCHHHHHHHHHHHHHHHhCCcccCCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCcccc
Confidence 7888776666778899999999999999999875345788999999975 555566775322 11222111
Q ss_pred -----hhcCCCCeEEeecccC---CCchhHHHHHHHHHHHHHHHHhh
Q 021616 267 -----RDNGYQGLFLGGNYVA---GVALGRCVESAYEVASEVSNFLS 305 (310)
Q Consensus 267 -----~~~~~~~l~~aG~~~~---g~gv~~ai~sG~~aA~~i~~~l~ 305 (310)
.. +.++|||||+++. ...|+||+.||.+||++|++.+.
T Consensus 614 ~~~~~~~-~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 614 SIPGAPQ-PIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp --------CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccC-CCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHHcc
Confidence 11 2368999999975 24599999999999999998764
No 10
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.94 E-value=2.5e-25 Score=205.84 Aligned_cols=225 Identities=12% Similarity=0.093 Sum_probs=175.2
Q ss_pred eeeccchhhHHHHHHHHHhc---cceeeCceeeeEEEcCCCcEE-EEEECCCCeEEEecCEEEEcCCchHHHhccCCC--
Q 021616 49 VGSFRKGLTMLPEAISKRLG---SKVKLSWKLSGVKKLDSGEYS-LTYETPEGLVSLRSRSVVMTVPSYVASSLLRPL-- 122 (310)
Q Consensus 49 ~~~~~gG~~~L~~~L~~~l~---~~i~~~~~V~~I~~~~~~~~~-v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~-- 122 (310)
.+++.||++.|+++|++.+. .+|++|++|++|..++++ +. |++ +| +++.||.||+|+|+..+.+|+++.
T Consensus 188 ~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~-~~gv~~---~g-~~~~ad~VV~a~~~~~~~~ll~~~~~ 262 (425)
T 3ka7_A 188 TGIPEGGCKGIIDALETVISANGGKIHTGQEVSKILIENGK-AAGIIA---DD-RIHDADLVISNLGHAATAVLCSEALS 262 (425)
T ss_dssp CEEETTSHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTE-EEEEEE---TT-EEEECSEEEECSCHHHHHHHTTTTCC
T ss_pred ccccCCCHHHHHHHHHHHHHHcCCEEEECCceeEEEEECCE-EEEEEE---CC-EEEECCEEEECCCHHHHHHhcCCccc
Confidence 57889999999999998874 589999999999998775 65 654 35 479999999999999999998642
Q ss_pred ---CHHHHhhccCCCCCCEEEEEEEecCCccccccccCCCcCcceEEecCCCCCceeEEEeccCCCCCCCCCCcEEEEEE
Q 021616 123 ---SVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNY 199 (310)
Q Consensus 123 ---~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~p~~~p~g~~~l~~~ 199 (310)
++...+.++++++.+++++++.++++.+ .+++++++.+ ...+.++++.|..+|..+|+|++++.++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~----------~~~~~~~~~~-~~~~~~~~~~s~~~p~~ap~G~~~l~~~ 331 (425)
T 3ka7_A 263 KEADAAYFKMVGTLQPSAGIKICLAADEPLV----------GHTGVLLTPY-TRRINGVNEVTQADPELAPPGKHLTMCH 331 (425)
T ss_dssp TTTTHHHHHHHHHCCCBEEEEEEEEESSCSS----------CSSSEEECCS-SSSEEEEECGGGTCGGGSCTTCEEEEEE
T ss_pred ccCCHHHHHHhhCcCCCceEEEEeecCCCcc----------CcCEEEECCC-hhhcceEEeccCCCCCcCCCCCeEEEEE
Confidence 4556677788889889999999998643 2356666554 3457788999999999999999998887
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCChHHHHHHHHHHhhhcCCCCeEEeec
Q 021616 200 IGGATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGN 279 (310)
Q Consensus 200 ~~g~~~~~~~~~~~eel~~~~~~~l~~~~~~~~~~~p~~~~~~rw~~a~p~~~~g~~~~~~~~~~~~~~~~~~~l~~aG~ 279 (310)
++..|.. .+. ++++++.++++|++++|.. .++...+++|++++|+|.+|+..+ . ....+.+|||+|||
T Consensus 332 ~~~~~~~--~~~-~~~~~~~~~~~l~~~~p~~---~~~~~~v~~~~~~~P~~~~~~~~~-----~-~~~~p~~gL~laG~ 399 (425)
T 3ka7_A 332 QYVAPEN--VKN-LESEIEMGLEDLKEIFPGK---RYEVLLIQSYHDEWPVNRAASGTD-----P-GNETPFSGLYVVGD 399 (425)
T ss_dssp EEECGGG--GGG-HHHHHHHHHHHHHHHSTTC---CEEEEEEEEEBTTBCSBSSCTTCC-----C-CSBCSSBTEEECST
T ss_pred ecccccc--ccc-hHHHHHHHHHHHHHhCCCC---ceEEEEEEEECCCccccccccCCC-----C-CCCCCcCCeEEeCC
Confidence 7654321 112 3456799999999999763 466778999999999999996532 1 11213469999999
Q ss_pred ccCC---CchhHHHHHHHHHHHHHH
Q 021616 280 YVAG---VALGRCVESAYEVASEVS 301 (310)
Q Consensus 280 ~~~g---~gv~~ai~sG~~aA~~i~ 301 (310)
|+.+ .||++|+.||+++|++|+
T Consensus 400 ~~~~~gg~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 400 GAKGKGGIEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp TSCCTTCCHHHHHHHHHHHHHHC--
T ss_pred ccCCCCCCccHHHHHHHHHHHHHhh
Confidence 9865 889999999999999986
No 11
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.93 E-value=2e-25 Score=211.25 Aligned_cols=241 Identities=11% Similarity=0.093 Sum_probs=186.0
Q ss_pred CCceeeeccchhhHHHHHHHHHhc---cceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchHHHhccCC
Q 021616 45 KGQTVGSFRKGLTMLPEAISKRLG---SKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRP 121 (310)
Q Consensus 45 ~~~~~~~~~gG~~~L~~~L~~~l~---~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~ 121 (310)
...+.+.++||+++|+++|++.+. .+|++|++|++|..+++. +++ .+| +++.||+||+|+|++.+..++.+
T Consensus 210 ~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~---v~~--~~G-~~~~ad~vI~t~P~~~l~~~l~~ 283 (513)
T 4gde_A 210 NATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT---VTL--QDG-TTIGYKKLVSTMAVDFLAEAMND 283 (513)
T ss_dssp TBEEEEESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE---EEE--TTS-CEEEEEEEEECSCHHHHHHHTTC
T ss_pred ccceeecccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEccCCE---EEE--cCC-CEEECCEEEECCCHHHHHHhcCc
Confidence 344567789999999999999985 379999999999987653 334 577 48999999999999999999874
Q ss_pred CCHHHHhhccCCCCCCEEEEEEEecCCccccccccCCCcCcceEEecCC--------------------CCCceeEEEec
Q 021616 122 LSVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRS--------------------QGVETLGTIYS 181 (310)
Q Consensus 122 ~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~--------------------~~~~~~~~~~~ 181 (310)
+....+...++|.++.+|++.++...... ..+.++++++.. ....+.++.|.
T Consensus 284 --~~~~~~~~~l~y~~~~~v~l~~~~~~~~~------~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~ 355 (513)
T 4gde_A 284 --QELVGLTKQLFYSSTHVIGVGVRGSRPER------IGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLA 355 (513)
T ss_dssp --HHHHHHHTTCCEEEEEEEEEEEESSCCTT------TTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEET
T ss_pred --hhhHhhhhcccCCceEEEEEEEecccccc------ccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEec
Confidence 45567778899999999999998753321 112223333221 12234455666
Q ss_pred cCCCCCCCCCCcEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCChHHHHHH
Q 021616 182 SSLFPNRAPAGRVLLLNYIGGATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDA 261 (310)
Q Consensus 182 s~~~p~~~p~g~~~l~~~~~g~~~~~~~~~~~eel~~~~~~~l~~~~~~~~~~~p~~~~~~rw~~a~p~~~~g~~~~~~~ 261 (310)
+..++...+.+...+.+++++.....+..+++|++++.++++|.++.+......+....+.||++|+|+|..||..++++
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~de~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~~~ayP~y~~~~~~~~~~ 435 (513)
T 4gde_A 356 DGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGTLTQ 435 (513)
T ss_dssp TSCCCSCCSEECCCEEEEEEEEEEBTTBCCCTTTHHHHHHHHHHHTTSSCTTCEEEEEEEEEEEEEEECCBTTHHHHHHH
T ss_pred cCCCcccccCCcceEEEEEecccchhccCCCHHHHHHHHHHHHHHhcCCCCccceEEEEEEECCCeecccCHhHHHHHHH
Confidence 66677666655556667776655667788999999999999999998876445567888999999999999999999999
Q ss_pred HHHHhhhcCCCCeEEeecc---cCC-CchhHHHHHHHHHHHHHHH
Q 021616 262 AKSSLRDNGYQGLFLGGNY---VAG-VALGRCVESAYEVASEVSN 302 (310)
Q Consensus 262 ~~~~~~~~~~~~l~~aG~~---~~g-~gv~~ai~sG~~aA~~i~~ 302 (310)
+++.+.. +|||+||.. -.. .++++|+.+|++||+.|+.
T Consensus 436 ~~~~l~~---~~l~~~GR~g~~~Y~~~n~D~a~~~g~~aa~~I~~ 477 (513)
T 4gde_A 436 ILPKLQD---KDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVN 477 (513)
T ss_dssp HHHHHHH---TTEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhh---cCcEEecCCcccCcCCCCHHHHHHHHHHHHHHHHc
Confidence 9988875 699999964 111 3699999999999999986
No 12
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.93 E-value=9.6e-26 Score=223.22 Aligned_cols=243 Identities=15% Similarity=0.201 Sum_probs=185.0
Q ss_pred eeeeccchhhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEEC----CCCeEEEecCEEEEcCCchHHHhc-----
Q 021616 48 TVGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYET----PEGLVSLRSRSVVMTVPSYVASSL----- 118 (310)
Q Consensus 48 ~~~~~~gG~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~----~~g~~~~~ad~VI~a~p~~~~~~l----- 118 (310)
..++++|||++|+++|++.+ +|++|++|++|.+++++ |.|++.+ .+| +++.||+||+|+|+.++..+
T Consensus 563 ~~~~~~gG~~~L~~aLa~~l--~I~Lnt~V~~I~~~~~g-V~V~~~~~~~~~~g-~~i~AD~VIvTvPl~vLk~l~~~I~ 638 (852)
T 2xag_A 563 SHLTVRNGYSCVPVALAEGL--DIKLNTAVRQVRYTASG-CEVIAVNTRSTSQT-FIYKCDAVLCTLPLGVLKQQPPAVQ 638 (852)
T ss_dssp CCEEETTCTTHHHHHHTTTC--CEECSEEEEEEEEETTE-EEEEEEESSSTTCE-EEEEESEEEECCCHHHHHCSSCSSE
T ss_pred ceEEecCcHHHHHHHHHhCC--CEEeCCeEEEEEEcCCc-EEEEEeecccCCCC-eEEECCEEEECCCHHHHHhhhcccc
Confidence 35899999999999999987 89999999999999886 8888642 113 57999999999999999874
Q ss_pred c-CCCCHHHHhhccCCCCCCEEEEEEEecCCccccccccCCCcCcceEEecCCCCCceeEEEeccCCCCCCCCCCcEEEE
Q 021616 119 L-RPLSVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLL 197 (310)
Q Consensus 119 l-~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~p~~~p~g~~~l~ 197 (310)
+ +++++...++++++.|.++.+|+|.|++++|.. +..+||++.+.......+.++|++. .. .+|.
T Consensus 639 F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~------~~~~fG~l~~~~~~~~~l~~~~~~~----~~----pvLl 704 (852)
T 2xag_A 639 FVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDP------SVNLFGHVGSTTASRGELFLFWNLY----KA----PILL 704 (852)
T ss_dssp EESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCT------TCCEEEECCSSSTTTTTTCEEEECS----SS----SEEE
T ss_pred cCCCCCHHHHHHHHcCCccceEEEEEEcCCcccCC------CCCeeeeeccccCCCCceEEEecCC----CC----CEEE
Confidence 2 455556677889999999999999999999862 2457888776655555566777754 11 2666
Q ss_pred EEecCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCC------CCCCCCCChHHH-HHHHHHHhh---
Q 021616 198 NYIGGATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQ------AIPQFLVGHLDL-LDAAKSSLR--- 267 (310)
Q Consensus 198 ~~~~g~~~~~~~~~~~eel~~~~~~~l~~~~~~~~~~~p~~~~~~rw~~------a~p~~~~g~~~~-~~~~~~~~~--- 267 (310)
+|++|..+..+..++++++++.++++|.++||......|..+.+++|.. ++..+.+|.... ...+...+.
T Consensus 705 ~~v~G~~a~~l~~lsdeel~~~~l~~L~~ifG~~~~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~~ 784 (852)
T 2xag_A 705 ALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGP 784 (852)
T ss_dssp EEECHHHHHHGGGSCHHHHHHHHHHHHHHHHCTTTCCCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCCC
T ss_pred EEecCcCHHHHhcCCHHHHHHHHHHHHHHHhCccccCCceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCcccccc
Confidence 8888776666778899999999999999999875345789999999975 565566775321 111111110
Q ss_pred -----hcCCCCeEEeecccC---CCchhHHHHHHHHHHHHHHHHhhhcc
Q 021616 268 -----DNGYQGLFLGGNYVA---GVALGRCVESAYEVASEVSNFLSQYA 308 (310)
Q Consensus 268 -----~~~~~~l~~aG~~~~---g~gv~~ai~sG~~aA~~i~~~l~~~~ 308 (310)
..+.++|||||+++. ...|+||+.||.+||++|++.+....
T Consensus 785 ~~p~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~l~~~~ 833 (852)
T 2xag_A 785 SIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAM 833 (852)
T ss_dssp SSTTCCCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHHCCG
T ss_pred ccccccCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHHhhCCC
Confidence 002368999999975 24599999999999999999875543
No 13
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.93 E-value=1.1e-24 Score=206.99 Aligned_cols=239 Identities=15% Similarity=0.200 Sum_probs=180.6
Q ss_pred eeeeccchhhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchHHHhcc--CCCCHH
Q 021616 48 TVGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLL--RPLSVD 125 (310)
Q Consensus 48 ~~~~~~gG~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll--~~~~~~ 125 (310)
..++++||+++|+++|++.++.+|++|++|++|+.++++ |.|++ .+| +++.||+||+|+|+.++.+++ ++.++.
T Consensus 206 ~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~-v~v~~--~~g-~~~~ad~VI~a~p~~~l~~l~~~p~lp~~ 281 (520)
T 1s3e_A 206 QERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTREN-VLVET--LNH-EMYEAKYVISAIPPTLGMKIHFNPPLPMM 281 (520)
T ss_dssp TSEEETTCTHHHHHHHHHHHGGGEESSCCEEEEECSSSS-EEEEE--TTS-CEEEESEEEECSCGGGGGGSEEESCCCHH
T ss_pred ceEEEeCCHHHHHHHHHHHcCCcEEcCCeeEEEEECCCe-EEEEE--CCC-eEEEeCEEEECCCHHHHcceeeCCCCCHH
Confidence 357899999999999999998899999999999988876 88775 677 478999999999999998885 445566
Q ss_pred HHhhccCCCCCCEEEEEEEecCCccccccccCCCcCcc-eEEecCCCCCceeEEEeccCCCCCCCCCCcEEEEEEecCCC
Q 021616 126 AAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGF-GQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGAT 204 (310)
Q Consensus 126 ~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~-g~l~~~~~~~~~~~~~~~s~~~p~~~p~g~~~l~~~~~g~~ 204 (310)
..++++++++.++.++++.|++++|.. .+| |.++..... ..+..+|++... +++..++.+|+++..
T Consensus 282 ~~~~i~~~~~~~~~kv~l~~~~~~w~~--------~~~~g~~~~~~~~-~~~~~~~d~~~~----~~~~~~l~~~~~~~~ 348 (520)
T 1s3e_A 282 RNQMITRVPLGSVIKCIVYYKEPFWRK--------KDYCGTMIIDGEE-APVAYTLDDTKP----EGNYAAIMGFILAHK 348 (520)
T ss_dssp HHHHTTSCCBCCEEEEEEECSSCGGGG--------GTEEEEEEECSTT-CSCSEEEECCCT----TSCSCEEEEEEETHH
T ss_pred HHHHHHhCCCcceEEEEEEeCCCcccC--------CCCCceeeccCCC-CceEEEeeCCCC----CCCCCEEEEEccchh
Confidence 678889999999999999999988752 223 444422222 223356765432 222357778887754
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCC------CC-CCCCCChHHHHHHHHHHhhhcCCCCeEEe
Q 021616 205 NLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQ------AI-PQFLVGHLDLLDAAKSSLRDNGYQGLFLG 277 (310)
Q Consensus 205 ~~~~~~~~~eel~~~~~~~l~~~~~~~~~~~p~~~~~~rw~~------a~-p~~~~g~~~~~~~~~~~~~~~~~~~l~~a 277 (310)
+..+..++++++.+.++++|++++|......|..+..++|.. ++ +.+.+|+.. .+++.+.. +.+|||||
T Consensus 349 a~~~~~~~~~e~~~~vl~~L~~~~~~~~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~---~~~~~l~~-p~~~L~fA 424 (520)
T 1s3e_A 349 ARKLARLTKEERLKKLCELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILT---QYGRVLRQ-PVDRIYFA 424 (520)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHHHTCGGGGCCSEEEEEEGGGCTTTCSSSCBCCCTTHHH---HHGGGTTC-CBTTEEEC
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHhCccccCCccEEEEEeeCCCCCCCCCCccccCCCccc---cchHHHhC-CCCCEEEe
Confidence 455667899999999999999999864235788899999952 23 356778643 33334444 56899999
Q ss_pred ecccC---CCchhHHHHHHHHHHHHHHHHhhhc
Q 021616 278 GNYVA---GVALGRCVESAYEVASEVSNFLSQY 307 (310)
Q Consensus 278 G~~~~---g~gv~~ai~sG~~aA~~i~~~l~~~ 307 (310)
|+++. ..+|++|+.||++||++|++.+.+.
T Consensus 425 G~~t~~~~~g~v~GAi~SG~~aA~~i~~~l~~~ 457 (520)
T 1s3e_A 425 GTETATHWSGYMEGAVEAGERAAREILHAMGKI 457 (520)
T ss_dssp SGGGCSSSTTSHHHHHHHHHHHHHHHHHHTTSS
T ss_pred ehhhcCcCcEEhHHHHHHHHHHHHHHHHHHhcC
Confidence 99862 3369999999999999999987543
No 14
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.92 E-value=5.7e-24 Score=199.66 Aligned_cols=242 Identities=15% Similarity=0.169 Sum_probs=174.1
Q ss_pred eeeccchhhHHHHHHHHHh-----------ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchHHHh
Q 021616 49 VGSFRKGLTMLPEAISKRL-----------GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASS 117 (310)
Q Consensus 49 ~~~~~gG~~~L~~~L~~~l-----------~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ 117 (310)
+..++|||++|+++|++.+ +.+|+++++|++|+..+++ +.|++ .+| ++++||+||+|+|+.++..
T Consensus 198 ~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~-v~v~~--~~g-~~~~ad~vI~a~~~~~l~~ 273 (472)
T 1b37_A 198 FVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGG-VTVKT--EDN-SVYSADYVMVSASLGVLQS 273 (472)
T ss_dssp EECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSC-EEEEE--TTS-CEEEESEEEECSCHHHHHT
T ss_pred eeecCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCc-EEEEE--CCC-CEEEcCEEEEecCHHHhcc
Confidence 3445899999999999986 3479999999999998886 88775 677 4789999999999999987
Q ss_pred cc----CCCCHHHHhhccCCCCCCEEEEEEEecCCccccccccCCCcCcceEEecCCCCCceeEEEeccCCCCCCCCCCc
Q 021616 118 LL----RPLSVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGR 193 (310)
Q Consensus 118 ll----~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~p~~~p~g~ 193 (310)
++ +++++...++++++.+.++.+|++.|++++|.. ..++++++.......... +|.+ ++...|++
T Consensus 274 ~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~-------~~~~~~~~~~~~~~~~~~-~~~~--~~~~~p~~- 342 (472)
T 1b37_A 274 DLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPE-------GKGREFFLYASSRRGYYG-VWQE--FEKQYPDA- 342 (472)
T ss_dssp TSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCSCC-------STTCSEEEECCSSTTSSC-EEEE--CTTTSTTC-
T ss_pred CCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCCCC-------CCCcceEEecccCCccce-eeec--ccCCCCCC-
Confidence 53 345555677788888999999999999988852 123444443322222222 2321 11122333
Q ss_pred EEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEec------CCCCCCCCCChHHHHHHHHHHhh
Q 021616 194 VLLLNYIGGATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVW------QQAIPQFLVGHLDLLDAAKSSLR 267 (310)
Q Consensus 194 ~~l~~~~~g~~~~~~~~~~~eel~~~~~~~l~~~~~~~~~~~p~~~~~~rw------~~a~p~~~~g~~~~~~~~~~~~~ 267 (310)
.+|.+++++..+..+..++++++.+.++++|++++|......|....+++| .++++.+.+|+... ....+.
T Consensus 343 ~~l~~~~~~~~a~~~~~~~~~e~~~~~l~~L~~~~Pg~~~~~~~~~~~~~W~~~~~~~G~~~~~~~g~~~~---~~~~l~ 419 (472)
T 1b37_A 343 NVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPGKDVPDATDILVPRWWSDRFYKGTFSNWPVGVNRY---EYDQLR 419 (472)
T ss_dssp CEEEEEEEHHHHHHHHTSCHHHHHHHHHHHHHHHCTTSCCCCCSEEECCCTTTCTTTSSSEEECBTTCCHH---HHHHHH
T ss_pred CEEEEEechHHHHHHHhCCHHHHHHHHHHHHHHHcCCCCCCCCceEEecccCCCCCCCcccCCCCCCCChh---HHHHHh
Confidence 456566655333335567899999999999999995432356777778899 56777778887542 123344
Q ss_pred hcCCCCeEEeecccC---CCchhHHHHHHHHHHHHHHHHhhhccc
Q 021616 268 DNGYQGLFLGGNYVA---GVALGRCVESAYEVASEVSNFLSQYAY 309 (310)
Q Consensus 268 ~~~~~~l~~aG~~~~---g~gv~~ai~sG~~aA~~i~~~l~~~~~ 309 (310)
+ +.++|||||++++ +.+|++|+.||++||++|++.+.+..+
T Consensus 420 ~-p~~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~~l~~~~~ 463 (472)
T 1b37_A 420 A-PVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQKKMC 463 (472)
T ss_dssp C-CBTTEEECSGGGCTTTTTSHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred c-cCCcEEEeecccCCCCCCchhHHHHHHHHHHHHHHHHHHhCcC
Confidence 4 5689999999975 346999999999999999998876544
No 15
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.91 E-value=8.1e-24 Score=197.37 Aligned_cols=232 Identities=18% Similarity=0.223 Sum_probs=173.6
Q ss_pred eeeccchhhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchHHHhcc--CCCCHHH
Q 021616 49 VGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLL--RPLSVDA 126 (310)
Q Consensus 49 ~~~~~gG~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll--~~~~~~~ 126 (310)
.++++|||++|+++|++.++.+|++|++|++|..++++.|.|+ + +| +++.||+||+|+|+.++.+++ ++.++..
T Consensus 207 ~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~~v~v~--~-~~-~~~~ad~VI~a~p~~~~~~l~~~p~lp~~~ 282 (453)
T 2yg5_A 207 DKRVIGGMQQVSIRMAEALGDDVFLNAPVRTVKWNESGATVLA--D-GD-IRVEASRVILAVPPNLYSRISYDPPLPRRQ 282 (453)
T ss_dssp CEEETTCTHHHHHHHHHHHGGGEECSCCEEEEEEETTEEEEEE--T-TT-EEEEEEEEEECSCGGGGGGSEEESCCCHHH
T ss_pred eEEEcCChHHHHHHHHHhcCCcEEcCCceEEEEEeCCceEEEE--E-CC-eEEEcCEEEEcCCHHHHhcCEeCCCCCHHH
Confidence 4789999999999999999889999999999998876315554 3 55 478999999999999998885 4555666
Q ss_pred HhhccCCCCCCEEEEEEEecCCccccccccCCCcCcc-eEEecCCCCCceeEEEeccCCCCCCCCCC-cEEEEEEecCCC
Q 021616 127 AGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGF-GQLHPRSQGVETLGTIYSSSLFPNRAPAG-RVLLLNYIGGAT 204 (310)
Q Consensus 127 ~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~-g~l~~~~~~~~~~~~~~~s~~~p~~~p~g-~~~l~~~~~g~~ 204 (310)
.++++++++.++.++++.|++++|.. .++ |.+++... ...++|+++. |++ ..++++++++..
T Consensus 283 ~~~i~~~~~~~~~kv~l~~~~~~w~~--------~~~~g~~~~~~~---~~~~~~~~~~-----~~~~~~~l~~~~~~~~ 346 (453)
T 2yg5_A 283 HQMHQHQSLGLVIKVHAVYETPFWRE--------DGLSGTGFGASE---VVQEVYDNTN-----HEDDRGTLVAFVSDEK 346 (453)
T ss_dssp HHHGGGEEECCEEEEEEEESSCGGGG--------GTEEEEEECTTS---SSCEEEECCC-----TTCSSEEEEEEEEHHH
T ss_pred HHHHhcCCCcceEEEEEEECCCCCCC--------CCCCceeecCCC---CeEEEEeCCC-----CCCCCCEEEEEeccHH
Confidence 77888899999999999999988752 123 44443221 2235666542 222 457888887654
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCC------C-CCCCCCChHHHHHHHHHHhhhcCCCCeEEe
Q 021616 205 NLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQ------A-IPQFLVGHLDLLDAAKSSLRDNGYQGLFLG 277 (310)
Q Consensus 205 ~~~~~~~~~eel~~~~~~~l~~~~~~~~~~~p~~~~~~rw~~------a-~p~~~~g~~~~~~~~~~~~~~~~~~~l~~a 277 (310)
+..+..++++++.+.++++|++++|.. ...|..+.+++|.. + .|++.+|+... +.+.+.+ +.+|||||
T Consensus 347 ~~~~~~~~~~~~~~~~l~~L~~~~~~~-~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~---~~~~~~~-p~~~l~~a 421 (453)
T 2yg5_A 347 ADAMFELSAEERKATILASLARYLGPK-AEEPVVYYESDWGSEEWTRGCYAASFDLGGLHR---YGADSRT-PVGPIHFS 421 (453)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHCGG-GGCCSEEEECCTTTCTTTCSSSCEEECTTHHHH---HGGGTTC-CBTTEEEC
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHhCcc-CCCccEEEEeecCCCCCCCCCCcCcCCCCcccc---chHHHhC-CcCceEEe
Confidence 445666789999999999999999864 35788888899963 2 24567886532 2333444 56899999
Q ss_pred ecccC--C-CchhHHHHHHHHHHHHHHHHhh
Q 021616 278 GNYVA--G-VALGRCVESAYEVASEVSNFLS 305 (310)
Q Consensus 278 G~~~~--g-~gv~~ai~sG~~aA~~i~~~l~ 305 (310)
|+++. + .+|++|+.||++||++|++.+.
T Consensus 422 G~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 452 (453)
T 2yg5_A 422 CSDIAAEGYQHVDGAVRMGQRTAADIIARSK 452 (453)
T ss_dssp CGGGCSTTTTSHHHHHHHHHHHHHHHHHHC-
T ss_pred ecccccccccchHHHHHHHHHHHHHHHHHhc
Confidence 99863 2 3599999999999999998763
No 16
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.91 E-value=1.1e-23 Score=198.76 Aligned_cols=240 Identities=17% Similarity=0.220 Sum_probs=172.8
Q ss_pred eeeeccchhhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCC-eEEEecCEEEEcCCchHHHhcc--CCCCH
Q 021616 48 TVGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEG-LVSLRSRSVVMTVPSYVASSLL--RPLSV 124 (310)
Q Consensus 48 ~~~~~~gG~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g-~~~~~ad~VI~a~p~~~~~~ll--~~~~~ 124 (310)
..++++||+++|+++|++.++.+|++|++|++|+.++++ |.|++.+.++ ..++.||+||+|+|+..+..+. +++++
T Consensus 232 ~~~~~~gG~~~l~~~l~~~l~~~i~~~~~V~~I~~~~~~-v~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~Lp~ 310 (498)
T 2iid_A 232 RFDEIVDGMDKLPTAMYRDIQDKVHFNAQVIKIQQNDQK-VTVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLLP 310 (498)
T ss_dssp CEEEETTCTTHHHHHHHHHTGGGEESSCEEEEEEECSSC-EEEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCCH
T ss_pred ceEEeCCcHHHHHHHHHHhcccccccCCEEEEEEECCCe-EEEEEecCCcccceEEeCEEEECCChHHHhheecCCCCCH
Confidence 467999999999999999998899999999999998886 8888743221 1247999999999999998863 56667
Q ss_pred HHHhhccCCCCCCEEEEEEEecCCccccccccCCCcCcceEEecCCCCCceeEEEeccCCCCCCCCCCcEEEEEEecCCC
Q 021616 125 DAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGAT 204 (310)
Q Consensus 125 ~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~p~~~p~g~~~l~~~~~g~~ 204 (310)
...+++++++|.++.+|++.|++++|... .. ++.+...+ .+...+.|++..+ |+|..+|.+++.+..
T Consensus 311 ~~~~ai~~l~~~~~~kv~l~~~~~~w~~~-----~~--~~~~~~~~--~~~~~~~~~s~~~----p~g~~~L~~~~~g~~ 377 (498)
T 2iid_A 311 KKAHALRSVHYRSGTKIFLTCTTKFWEDD-----GI--HGGKSTTD--LPSRFIYYPNHNF----TNGVGVIIAYGIGDD 377 (498)
T ss_dssp HHHHHHHHCCEECEEEEEEEESSCGGGGG-----TC--CSSEEEES--STTCEEECCSSCC----TTSCEEEEEEEEHHH
T ss_pred HHHHHHHhCCCcceeEEEEEeCCCCccCC-----Cc--cCCcccCC--CCcceEEECCCCC----CCCCcEEEEEeCCcc
Confidence 77888899999999999999999988521 11 12122111 2233455655332 445566777776655
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhCCCCCCC----CcEEEEEecCC------CCCCCCCChHHHHHHHHHHhhhcCCCCe
Q 021616 205 NLGILSKKESELVEAVDRDLRKMLINPNAKD----PLVLGVRVWQQ------AIPQFLVGHLDLLDAAKSSLRDNGYQGL 274 (310)
Q Consensus 205 ~~~~~~~~~eel~~~~~~~l~~~~~~~~~~~----p~~~~~~rw~~------a~p~~~~g~~~~~~~~~~~~~~~~~~~l 274 (310)
+..+..++++++.+.++++|++++|... .. +....+++|.. ++..+.++... .+...+.. +.++|
T Consensus 378 a~~~~~~~~~~~~~~~l~~L~~~~g~~~-~~~~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~---~~~~~l~~-p~~~l 452 (498)
T 2iid_A 378 ANFFQALDFKDCADIVFNDLSLIHQLPK-KDIQSFCYPSVIQKWSLDKYAMGGITTFTPYQFQ---HFSDPLTA-SQGRI 452 (498)
T ss_dssp HHTTTTSCHHHHHHHHHHHHHHHHTCCH-HHHHHHEEEEEEEEGGGCTTTCSSEECCCTTHHH---HHHHHHHC-CBTTE
T ss_pred HhhhhcCCHHHHHHHHHHHHHHHcCCCh-hhhhhhcCccEEEecCCCCCCCceeeecCCcchH---HHHHHHhC-CCCcE
Confidence 5566778999999999999999998531 11 12356789975 22223344322 23444554 46899
Q ss_pred EEeecccC--CCchhHHHHHHHHHHHHHHHHhhh
Q 021616 275 FLGGNYVA--GVALGRCVESAYEVASEVSNFLSQ 306 (310)
Q Consensus 275 ~~aG~~~~--g~gv~~ai~sG~~aA~~i~~~l~~ 306 (310)
||||+++. ..++++|+.||+++|++|++.+..
T Consensus 453 ~fAGe~t~~~~g~~~GAi~SG~raA~~i~~~l~~ 486 (498)
T 2iid_A 453 YFAGEYTAQAHGWIDSTIKSGLRAARDVNLASEN 486 (498)
T ss_dssp EECSGGGSSSSSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEcccccCCcCHHHHHHHHHHHHHHHHHHhcC
Confidence 99999973 346999999999999999988743
No 17
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.90 E-value=1.9e-22 Score=186.53 Aligned_cols=215 Identities=11% Similarity=0.038 Sum_probs=158.6
Q ss_pred eeeccchhhHHHHHHHHHhc---cceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchHHHhccC-C-CC
Q 021616 49 VGSFRKGLTMLPEAISKRLG---SKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLR-P-LS 123 (310)
Q Consensus 49 ~~~~~gG~~~L~~~L~~~l~---~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~-~-~~ 123 (310)
.+.++||++.|+++|++.+. .+|++|++|++|+.++++ | |+ .+| +++.||.||+|+|+..+.+|++ + .+
T Consensus 181 ~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~-v-V~---~~g-~~~~ad~Vv~a~~~~~~~~ll~~~~~~ 254 (421)
T 3nrn_A 181 PGLIRGGCKAVIDELERIIMENKGKILTRKEVVEINIEEKK-V-YT---RDN-EEYSFDVAISNVGVRETVKLIGRDYFD 254 (421)
T ss_dssp CEEETTCHHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTE-E-EE---TTC-CEEECSEEEECSCHHHHHHHHCGGGSC
T ss_pred cceecCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCE-E-EE---eCC-cEEEeCEEEECCCHHHHHHhcCcccCC
Confidence 57889999999999998874 589999999999988775 7 53 355 3799999999999999999986 2 45
Q ss_pred HHHHhhccCCCCCCEEEEEEEecCCccccccccCCCcCcceEEecCCCCCceeEEEeccCCCCCCCCCCcEEEEEEecCC
Q 021616 124 VDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGA 203 (310)
Q Consensus 124 ~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~p~~~p~g~~~l~~~~~g~ 203 (310)
++..+.++++.+.+++++++.++++.+ ..++++++.+.. +.++.+.|..+|..+|+|+.++.+..-
T Consensus 255 ~~~~~~~~~~~~~~~~~v~l~~~~~~~----------~~~~~~~~~~~~--~~~i~~~s~~~p~~ap~G~~~~~~~~~-- 320 (421)
T 3nrn_A 255 RDYLKQVDSIEPSEGIKFNLAVPGEPR----------IGNTIVFTPGLM--INGFNEPSALDKSLAREGYTLIMAHMA-- 320 (421)
T ss_dssp HHHHHHHHTCCCCCEEEEEEEEESSCS----------SCSSEEECTTSS--SCEEECGGGTCGGGSCTTEEEEEEEEE--
T ss_pred HHHHHHHhCCCCCceEEEEEEEcCCcc----------cCCeEEEcCCcc--eeeEeccCCCCCCcCCCCceEEEEEEe--
Confidence 566677889999999999999998632 234666665543 667888899888888999887766542
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCChHHHHHHHHHHhhhcCCCCeEEeecccCC
Q 021616 204 TNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNYVAG 283 (310)
Q Consensus 204 ~~~~~~~~~~eel~~~~~~~l~~~~~~~~~~~p~~~~~~rw~~a~p~~~~g~~~~~~~~~~~~~~~~~~~l~~aG~~~~g 283 (310)
+...+.++.++.++++|.+++| . .+...+++|..++|+|...... .+. ..+ +|||+||||+.+
T Consensus 321 ----~~~~~~~~~~~~~~~~L~~~~p-~----~~~~~~~~~~~~~p~~~~~~~~---~~~----~~~-~gl~laGd~~~~ 383 (421)
T 3nrn_A 321 ----LKNGNVKKAIEKGWEELLEIFP-E----GEPLLAQVYRDGNPVNRTRAGL---HIE----WPL-NEVLVVGDGYRP 383 (421)
T ss_dssp ----CTTCCHHHHHHHHHHHHHHHCT-T----CEEEEEEEC----------------CCC----CCC-SSEEECSTTCCC
T ss_pred ----eccccHHHHHHHHHHHHHHHcC-C----CeEEEeeeccCCCCcccccCCC---CCC----CCC-CcEEEECCcccC
Confidence 1123445669999999999998 2 3455678899999998533211 111 225 899999999987
Q ss_pred C-ch--hHHHHHHHHHHHHH
Q 021616 284 V-AL--GRCVESAYEVASEV 300 (310)
Q Consensus 284 ~-gv--~~ai~sG~~aA~~i 300 (310)
. ++ ++|+.||++||+.|
T Consensus 384 ~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 384 PGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp TTCCHHHHHHHHHHHHHHHT
T ss_pred CCceeeehHHHHHHHHHHHh
Confidence 6 55 99999999999998
No 18
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.90 E-value=2.9e-22 Score=179.35 Aligned_cols=229 Identities=16% Similarity=0.173 Sum_probs=180.4
Q ss_pred eeeeccchhhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchHHHhccCCCCHHHH
Q 021616 48 TVGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSVDAA 127 (310)
Q Consensus 48 ~~~~~~gG~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~~~~~~ 127 (310)
..|...+||+.|.+.|++.+ +|+++++|++|+.++++ |.|++ .+|+....||.||+|+|+..+.+++.. .+.+.
T Consensus 101 ~~~~~~~~~~~l~~~l~~g~--~i~~~~~v~~i~~~~~~-~~v~~--~~g~~~~~a~~vV~a~g~~~~~~~~~~-~~~l~ 174 (336)
T 1yvv_A 101 VRWVGKPGMSAITRAMRGDM--PVSFSCRITEVFRGEEH-WNLLD--AEGQNHGPFSHVIIATPAPQASTLLAA-APKLA 174 (336)
T ss_dssp CEEEESSCTHHHHHHHHTTC--CEECSCCEEEEEECSSC-EEEEE--TTSCEEEEESEEEECSCHHHHGGGGTT-CHHHH
T ss_pred ccEEcCccHHHHHHHHHccC--cEEecCEEEEEEEeCCE-EEEEe--CCCcCccccCEEEEcCCHHHHHHhhcc-CHHHH
Confidence 34677789999999999855 89999999999999886 88885 677433359999999999999998865 46677
Q ss_pred hhccCCCCCCEEEEEEEecCCccccccccCCCcCcceEEecCCCCCceeEEEeccCCCCCCCCCCcEEEEEEecCCCCCC
Q 021616 128 GALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGATNLG 207 (310)
Q Consensus 128 ~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~p~~~p~g~~~l~~~~~g~~~~~ 207 (310)
..+..++|.++.++++.|+++.+. +.. +++.+. ..++++|++..+|++.+.+ ..+.++..+.++..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~--~~~~~~----~~~~~l~~~~~~p~~~~~~-~~~v~~~~~~~~~~ 240 (336)
T 1yvv_A 175 SVVAGVKMDPTWAVALAFETPLQT-------PMQ--GCFVQD----SPLDWLARNRSKPERDDTL-DTWILHATSQWSRQ 240 (336)
T ss_dssp HHHTTCCEEEEEEEEEEESSCCSC-------CCC--EEEECS----SSEEEEEEGGGSTTCCCSS-EEEEEEECHHHHHH
T ss_pred HHHhhcCccceeEEEEEecCCCCC-------CCC--eEEeCC----CceeEEEecCcCCCCCCCC-cEEEEEeCHHHHHH
Confidence 888899999999999999987542 222 333432 3467888887777765533 24555555555566
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCChHHHHHHHHHHhhhcCCCCeEEeecccCCCchh
Q 021616 208 ILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNYVAGVALG 287 (310)
Q Consensus 208 ~~~~~~eel~~~~~~~l~~~~~~~~~~~p~~~~~~rw~~a~p~~~~g~~~~~~~~~~~~~~~~~~~l~~aG~~~~g~gv~ 287 (310)
+..++++++.+.+++++.+++|.. ...|.+..++||.+++|++..++. .... ..++|+||||+++|.+++
T Consensus 241 ~~~~~~~~~~~~l~~~l~~~lg~~-~~~p~~~~~~rw~~a~~~~~~~~~--------~~~~-~~~rl~laGDa~~g~gv~ 310 (336)
T 1yvv_A 241 NLDASREQVIEHLHGAFAELIDCT-MPAPVFSLAHRWLYARPAGAHEWG--------ALSD-ADLGIYVCGDWCLSGRVE 310 (336)
T ss_dssp TTTSCHHHHHHHHHHHHHTTCSSC-CCCCSEEEEEEEEEEEESSCCCCS--------CEEE-TTTTEEECCGGGTTSSHH
T ss_pred HHhCCHHHHHHHHHHHHHHHhCCC-CCCCcEEEccccCccCCCCCCCCC--------eeec-CCCCEEEEecCCCCCCHH
Confidence 778899999999999999999865 356888899999999999887753 1111 348999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhh
Q 021616 288 RCVESAYEVASEVSNFLSQ 306 (310)
Q Consensus 288 ~ai~sG~~aA~~i~~~l~~ 306 (310)
+|+.||.++|+.|.+.+..
T Consensus 311 ~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 311 GAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhhh
Confidence 9999999999999988754
No 19
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.89 E-value=5.6e-23 Score=202.17 Aligned_cols=238 Identities=16% Similarity=0.251 Sum_probs=177.9
Q ss_pred eeeeccchhhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchHHHh----ccCCCC
Q 021616 48 TVGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASS----LLRPLS 123 (310)
Q Consensus 48 ~~~~~~gG~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~----ll~~~~ 123 (310)
....+.+|++.|+++|++.+ +|++|++|++|+.++++ |.|++ .+| +++.||+||+|+|+.++.. +.++++
T Consensus 525 ~~~~~~~G~~~l~~aLa~gl--~I~l~t~V~~I~~~~~~-v~V~~--~~G-~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp 598 (776)
T 4gut_A 525 DHTLLTPGYSVIIEKLAEGL--DIQLKSPVQCIDYSGDE-VQVTT--TDG-TGYSAQKVLVTVPLALLQKGAIQFNPPLS 598 (776)
T ss_dssp CEEECTTCTHHHHHHHHTTS--CEESSCCEEEEECSSSS-EEEEE--TTC-CEEEESEEEECCCHHHHHTTCSEEESCCC
T ss_pred CeEEECChHHHHHHHHHhCC--cEEcCCeeEEEEEcCCE-EEEEE--CCC-cEEEcCEEEECCCHHHHhhcccccCCCCC
Confidence 35778999999999999877 89999999999998886 88876 567 4799999999999999975 235666
Q ss_pred HHHHhhccCCCCCCEEEEEEEecCCccccccccCCCcCcceEEecCCCCCceeEEEeccCCCCCCCCCCcEEEEEEecCC
Q 021616 124 VDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGA 203 (310)
Q Consensus 124 ~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~p~~~p~g~~~l~~~~~g~ 203 (310)
+...++++++.+.++.+|++.|++++|... +. ....||++.+..+...+.+++|++. | +.+..+|..+++|.
T Consensus 599 ~~~~~ai~~l~~g~~~KV~l~f~~~FW~~~-~~--g~~~fG~l~~~~~~~~~~~~~~d~~--p---~g~~~vL~~~i~G~ 670 (776)
T 4gut_A 599 EKKMKAINSLGAGIIEKIALQFPYRFWDSK-VQ--GADFFGHVPPSASKRGLFAVFYDMD--P---QKKHSVLMSVIAGE 670 (776)
T ss_dssp HHHHHHHHHEEEECCEEEEEECSSCTTHHH-HT--TCSEEEECCSSGGGTTEEEEEEESC--T---TSCSCEEEEEECTH
T ss_pred HHHHHHHHhCCCeeEEEEEEecCccccccc-CC--CCceEEeecCCcCCCceEEEEecCC--C---CCCceEEEEEecch
Confidence 667788888999999999999999998631 10 1245666655444556677777653 2 11234777788776
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCC------CCCCCCCChHHHHHHHHHHhhhcCCCCeEEe
Q 021616 204 TNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQ------AIPQFLVGHLDLLDAAKSSLRDNGYQGLFLG 277 (310)
Q Consensus 204 ~~~~~~~~~~eel~~~~~~~l~~~~~~~~~~~p~~~~~~rw~~------a~p~~~~g~~~~~~~~~~~~~~~~~~~l~~a 277 (310)
.+..+..++++++++.++++|++++|......|..+.+++|.. ++..+.+|.... ....+..+..++|+||
T Consensus 671 ~a~~l~~lsdeel~~~~l~~L~~ifg~~~~~~P~~~~vt~W~~dp~s~Gsys~~~~g~~~~---~~~~L~~p~~grL~FA 747 (776)
T 4gut_A 671 AVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGE---AYDIIAEDIQGTVFFA 747 (776)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHHTTTSCCCCCSEEEECCGGGCTTTCCSEEEEBTTCCTH---HHHHHHCCBTTTEEEC
T ss_pred hHHHHHcCCHHHHHHHHHHHHHHHhCcccccCcceEEEecCCCCCccCCCCCccCCCCchh---HHHHHhCcCCCcEEEE
Confidence 5556678999999999999999999975446788999999963 222233443211 1123443223789999
Q ss_pred ecccC---CCchhHHHHHHHHHHHHHHH
Q 021616 278 GNYVA---GVALGRCVESAYEVASEVSN 302 (310)
Q Consensus 278 G~~~~---g~gv~~ai~sG~~aA~~i~~ 302 (310)
|+++. ...|+||+.||.++|++|++
T Consensus 748 GE~Ts~~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 748 GEATNRHFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp SGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred ehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence 99975 23599999999999999974
No 20
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.89 E-value=1.2e-21 Score=184.77 Aligned_cols=228 Identities=16% Similarity=0.144 Sum_probs=169.8
Q ss_pred eeeeccchhhHHHHHHHHHhcc----ceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchHHHhcc--CC
Q 021616 48 TVGSFRKGLTMLPEAISKRLGS----KVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLL--RP 121 (310)
Q Consensus 48 ~~~~~~gG~~~L~~~L~~~l~~----~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll--~~ 121 (310)
..|+++||+++|+++|++.+.. +|+++++|++|+..+++ +.|++ .+| +++.||+||+|+|+.++..+. ++
T Consensus 246 ~~~~~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~-v~v~~--~~g-~~~~ad~vI~a~~~~~l~~i~~~p~ 321 (495)
T 2vvm_A 246 MSYKFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDA-ARVTA--RDG-REFVAKRVVCTIPLNVLSTIQFSPA 321 (495)
T ss_dssp HSEEETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSS-EEEEE--TTC-CEEEEEEEEECCCGGGGGGSEEESC
T ss_pred ceEEeCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCE-EEEEE--CCC-CEEEcCEEEECCCHHHHhheeeCCC
Confidence 4678999999999999999853 49999999999988876 88775 567 478999999999999999884 44
Q ss_pred CCHHHHhhccCCCCCCEEEEEEEecCCccccccccCCCcCcceEEecCCCCCceeEEEeccCCCCCCCCCCcEEEEEEec
Q 021616 122 LSVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIG 201 (310)
Q Consensus 122 ~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~p~~~p~g~~~l~~~~~ 201 (310)
+++...++++.+.|.++.+|++.|++++|. ++..+...+. + +..+|+... .|.+..+|.++++
T Consensus 322 lp~~~~~ai~~~~~~~~~kv~l~~~~~~~~----------~~~g~~~~~~--~-~~~~~~~~~----~~~~~~vl~~~~~ 384 (495)
T 2vvm_A 322 LSTERISAMQAGHVSMCTKVHAEVDNKDMR----------SWTGIAYPFN--K-LCYAIGDGT----TPAGNTHLVCFGN 384 (495)
T ss_dssp CCHHHHHHHHHCCCCCCEEEEEEESCGGGG----------GEEEEECSSC--S-SCEEEEEEE----CTTSCEEEEEEEC
T ss_pred CCHHHHHHHHhcCCCceeEEEEEECCccCC----------CceeEecCCC--C-cEEEecCCC----CCCCCeEEEEEeC
Confidence 566667888889999999999999987653 2322332221 2 234554322 2445567777765
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecC------CCCCCCCCChHHHHHHHHHHhhhcCCCCeE
Q 021616 202 GATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQ------QAIPQFLVGHLDLLDAAKSSLRDNGYQGLF 275 (310)
Q Consensus 202 g~~~~~~~~~~~eel~~~~~~~l~~~~~~~~~~~p~~~~~~rw~------~a~p~~~~g~~~~~~~~~~~~~~~~~~~l~ 275 (310)
.. . . +++++..+.++++|+++++.. ..|..+.+++|. ++++.+.+|+... ..+.+.. +.++||
T Consensus 385 ~~-~-~---~~~~e~~~~~~~~L~~~~~~~--~~~~~~~~~~W~~dp~~~g~y~~~~~g~~~~---~~~~l~~-p~~~l~ 453 (495)
T 2vvm_A 385 SA-N-H---IQPDEDVRETLKAVGQLAPGT--FGVKRLVFHNWVKDEFAKGAWFFSRPGMVSE---CLQGLRE-KHGGVV 453 (495)
T ss_dssp ST-T-C---CCTTTCHHHHHHHHHTTSTTS--CCEEEEEECCTTTCTTTSSSSCCCCTTHHHH---HHHHHHC-CBTTEE
T ss_pred cc-c-c---CCCHHHHHHHHHHHHHhcCCC--CCceEEEEeEcCCCCCCCCCccCcCCCcchh---hHHHHhC-cCCCEE
Confidence 32 1 1 455667788999999987652 467888889994 6888889998643 2334444 568999
Q ss_pred EeecccC---CCchhHHHHHHHHHHHHHHHHhhhc
Q 021616 276 LGGNYVA---GVALGRCVESAYEVASEVSNFLSQY 307 (310)
Q Consensus 276 ~aG~~~~---g~gv~~ai~sG~~aA~~i~~~l~~~ 307 (310)
|||+++. ...|++|+.||++||++|++.+.+.
T Consensus 454 fAGe~t~~~~~g~veGAi~SG~raA~~i~~~l~~~ 488 (495)
T 2vvm_A 454 FANSDWALGWRSFIDGAIEEGTRAARVVLEELGTK 488 (495)
T ss_dssp ECCGGGCSSSTTSHHHHHHHHHHHHHHHHHHHCCC
T ss_pred EechhhhcCCceEEEhHHHHHHHHHHHHHHHhccc
Confidence 9999975 3459999999999999999987554
No 21
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.82 E-value=7.7e-19 Score=166.49 Aligned_cols=240 Identities=15% Similarity=0.183 Sum_probs=156.1
Q ss_pred eccchhhHHHHHHHHHhc-cceeeCceeeeEEEc-CCCcEEEEEECCCCeEEEecCEEEEcCCchHHHh-----------
Q 021616 51 SFRKGLTMLPEAISKRLG-SKVKLSWKLSGVKKL-DSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASS----------- 117 (310)
Q Consensus 51 ~~~gG~~~L~~~L~~~l~-~~i~~~~~V~~I~~~-~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~----------- 117 (310)
.+.| +++|+++|++.+. .+|++|++|++|..+ +++ +.|++ .+| +++.||+||+|+|+.++..
T Consensus 197 ~~~g-~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~-v~v~~--~~g-~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~ 271 (516)
T 1rsg_A 197 FALN-YDSVVQRIAQSFPQNWLKLSCEVKSITREPSKN-VTVNC--EDG-TVYNADYVIITVPQSVLNLSVQPEKNLRGR 271 (516)
T ss_dssp EESC-HHHHHHHHHTTSCGGGEETTCCEEEEEECTTSC-EEEEE--TTS-CEEEEEEEEECCCHHHHHGGGSSCSCSTTC
T ss_pred hhhC-HHHHHHHHHHhCCCCEEEECCEEEEEEEcCCCe-EEEEE--CCC-cEEECCEEEECCCHHHhhhccccccccccc
Confidence 4566 9999999999986 479999999999987 454 77776 677 4789999999999999963
Q ss_pred --ccCCCCHHHHhhccCCCCCCEEEEEEEecCCccccccccCCCcCcceEEecCCCCCceeEEEecc-------------
Q 021616 118 --LLRPLSVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSS------------- 182 (310)
Q Consensus 118 --ll~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s------------- 182 (310)
+.+++++...++++++.|.++.+|++.|++++|+. +..++..+..... ++.. .++.
T Consensus 272 i~f~P~Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~------~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~ 342 (516)
T 1rsg_A 272 IEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWSN------ESSKIVTLANSTN--EFVE-IVRNAENLDELDSMLER 342 (516)
T ss_dssp CEEESCCCHHHHHHTTSSCCCCCEEEEEEESSCCSCC------SCSEEEECCCCCH--HHHH-HHHHCCSHHHHHHHC--
T ss_pred eEecCCCCHHHHHHHHhCCCCcceEEEEEeCCCCCCC------CCCcEEEeCCCCc--cchh-hcccCcccchhhhcccc
Confidence 24566677788999999999999999999999863 1223332221110 0000 0000
Q ss_pred ---------CC--CCC-----CCCCCcEEEEEEecCCCCCCCCCC--CHHHHHH---HHHHHHHHHhCC------CCC--
Q 021616 183 ---------SL--FPN-----RAPAGRVLLLNYIGGATNLGILSK--KESELVE---AVDRDLRKMLIN------PNA-- 233 (310)
Q Consensus 183 ---------~~--~p~-----~~p~g~~~l~~~~~g~~~~~~~~~--~~eel~~---~~~~~l~~~~~~------~~~-- 233 (310)
.. +|. ..+.|..+|.+++.|..+..+..+ +++++.+ .+++.|.+++|. ...
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~g~~a~~~~~l~~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~ 422 (516)
T 1rsg_A 343 EDSQKHTSVTCWSQPLFFVNLSKSTGVASFMMLMQAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIE 422 (516)
T ss_dssp -------CCCTTSSCEEEEEHHHHTSCSEEEEEECBTHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTCCCCEECCC---
T ss_pred cccccccccccccCceeEEEeeecCCCcEEEEEecchHHHHHHhcCCCHHHHHHHHHHHHHHHHhhccccccccCCCCcc
Confidence 00 010 001233356678876544444455 8888765 467777777762 110
Q ss_pred -----CCCc--EEEEEecC------CCCCCCCCChHHHHHHHHHHhhhcCCCCeEEeecccC---CCchhHHHHHHHHHH
Q 021616 234 -----KDPL--VLGVRVWQ------QAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNYVA---GVALGRCVESAYEVA 297 (310)
Q Consensus 234 -----~~p~--~~~~~rw~------~a~p~~~~g~~~~~~~~~~~~~~~~~~~l~~aG~~~~---g~gv~~ai~sG~~aA 297 (310)
..|. .+.+++|. +++..+.||.... .+.+.+..++.++|||||+++. ...|+||+.||.+||
T Consensus 423 ~~~~a~~p~~~~~~~~~W~~dp~~~Gsys~~~~g~~~~--~~~~~l~~~~~~rl~FAGe~ts~~~~g~v~GA~~SG~raA 500 (516)
T 1rsg_A 423 NIANANKPVLRNIIVSNWTRDPYSRGAYSACFPGDDPV--DMVVAMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREA 500 (516)
T ss_dssp ----CCSCEEEEEEECCTTTCTTTTTCCCCCBC----C--HHHHHHHHCSSSSEEECSTTSCSTTBTSHHHHHHHHHHHH
T ss_pred cccccCCCccceEEEecCCCCCCCCccCCCcCCCCCHH--HHHHHhccCCCCcEEEeccccccCCCccchhHHHHHHHHH
Confidence 1254 67778895 4555566775321 1122333224578999999974 234999999999999
Q ss_pred HHHHHHhhh
Q 021616 298 SEVSNFLSQ 306 (310)
Q Consensus 298 ~~i~~~l~~ 306 (310)
++|++.+..
T Consensus 501 ~~i~~~~~~ 509 (516)
T 1rsg_A 501 TRISDLLKL 509 (516)
T ss_dssp HHHHHHHHG
T ss_pred HHHHHHhhh
Confidence 999988754
No 22
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.81 E-value=6.1e-19 Score=166.40 Aligned_cols=245 Identities=14% Similarity=0.056 Sum_probs=129.5
Q ss_pred eeeeccchhhHHHHHHHHHhc---cceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchHHH-hccCCCC
Q 021616 48 TVGSFRKGLTMLPEAISKRLG---SKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVAS-SLLRPLS 123 (310)
Q Consensus 48 ~~~~~~gG~~~L~~~L~~~l~---~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~-~ll~~~~ 123 (310)
..|+++|||++|+++|++.+. ++|++|++|++|..++++...|++ .+| +++.||+||+++++..+. .|++..+
T Consensus 212 G~~~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~--~~g-~~~~ad~VV~~a~~~~~~~~Ll~~~~ 288 (501)
T 4dgk_A 212 GVWFPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHL--EDG-RRFLTQAVASNADVVHTYRDLLSQHP 288 (501)
T ss_dssp CEEEETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE--TTS-CEEECSCEEECCC-------------
T ss_pred CeEEeCCCCcchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEe--cCC-cEEEcCEEEECCCHHHHHHHhccccc
Confidence 467899999999999998764 589999999999999885233665 678 589999999999888765 4555432
Q ss_pred --HHHHhhccCCCCC-CEEEEEEEecCCccccccccCCCcCcceEEecCCC--------------CCceeEEEeccCCCC
Q 021616 124 --VDAAGALSQFYYP-PVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQ--------------GVETLGTIYSSSLFP 186 (310)
Q Consensus 124 --~~~~~~l~~~~~~-~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~~--------------~~~~~~~~~~s~~~p 186 (310)
....+.+++.++. +..+++++++..... ...+.+++..+. ..+...+...|...|
T Consensus 289 ~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~--------l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp 360 (501)
T 4dgk_A 289 AAVKQSNKLQTKRMSNSLFVLYFGLNHHHDQ--------LAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDS 360 (501)
T ss_dssp --------------CCEEEEEEEEESSCCTT--------SCSEEEEEECC-------------CCCEEEEEEECGGGTCG
T ss_pred cchhhhhhhhccccCCceeEEEecccCCccc--------cccceeccccchhhhccccccccccccCCceecccCCCCCC
Confidence 2234455666665 577888888875311 111222222110 112222334455556
Q ss_pred CCCCCCcEEEEEEecCCCCCCCCC----CCHHHHHHHHHHHHHHHh-CCCCCCCCcEEEEE---ecCCCCCC-----CCC
Q 021616 187 NRAPAGRVLLLNYIGGATNLGILS----KKESELVEAVDRDLRKML-INPNAKDPLVLGVR---VWQQAIPQ-----FLV 253 (310)
Q Consensus 187 ~~~p~g~~~l~~~~~g~~~~~~~~----~~~eel~~~~~~~l~~~~-~~~~~~~p~~~~~~---rw~~a~p~-----~~~ 253 (310)
..+|+|+..+.+++.... ....+ ..++++.+.+++.|++.+ +.. +...+...+. .|..-+.. |..
T Consensus 361 ~~ap~G~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~vl~~l~~~~~P~~-~~~i~~~~~~tP~~~~~~~~~~~G~~~g~ 438 (501)
T 4dgk_A 361 SLAPEGCGSYYVLAPVPH-LGTANLDWTVEGPKLRDRIFAYLEQHYMPGL-RSQLVTHRMFTPFDFRDQLNAYHGSAFSV 438 (501)
T ss_dssp GGSSTTCEEEEEEEEECC-TTTSCCCHHHHHHHHHHHHHHHHHHHTCTTH-HHHEEEEEEECTTTTC-------------
T ss_pred CcCCCCCceEEEEEecCc-cccccccHHHHHHHHHHHHHHHHHHhhCCCh-HHceEEEEECCHHHHHHHcCCCCccccCh
Confidence 678999888777664221 11112 224677888888888765 433 1223333332 12221111 111
Q ss_pred ChHH-HHHHHHHHhhhcCCCCeEEeecccC-CCchhHHHHHHHHHHHHHHHHhh
Q 021616 254 GHLD-LLDAAKSSLRDNGYQGLFLGGNYVA-GVALGRCVESAYEVASEVSNFLS 305 (310)
Q Consensus 254 g~~~-~~~~~~~~~~~~~~~~l~~aG~~~~-g~gv~~ai~sG~~aA~~i~~~l~ 305 (310)
.+.. ....+++.....+.+|||+||++++ |.||++|+.||+.||++|+++|.
T Consensus 439 ~~~~~q~~~~RP~~~~t~i~gLyl~G~~t~pG~Gv~ga~~SG~~aA~~il~dL~ 492 (501)
T 4dgk_A 439 EPVLTQSAWFRPHNRDKTITNLYLVGAGTHPGAGIPGVIGSAKATAGLMLEDLI 492 (501)
T ss_dssp -----------------CCTTEEECCCH------HHHHHHHHHHHHHHHHHHHC
T ss_pred hcchhhccccCCCCCCCCCCCEEEECCCCCCcccHHHHHHHHHHHHHHHHHHhc
Confidence 1111 0111233222236799999999977 88999999999999999999873
No 23
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.78 E-value=3e-18 Score=158.33 Aligned_cols=221 Identities=13% Similarity=0.186 Sum_probs=146.1
Q ss_pred eeeccchhhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchHHHhccCCCCHHHHh
Q 021616 49 VGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSVDAAG 128 (310)
Q Consensus 49 ~~~~~gG~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~ 128 (310)
.+++.+|+++|+++|++.++.+|++|++|++|..++++ +.|++ .+| ++.||+||+|+|+..+.+++++. +...+
T Consensus 198 ~~~~~~g~~~l~~~l~~~l~~~v~~~~~V~~i~~~~~~-v~v~~--~~g--~~~ad~Vv~a~~~~~~~~~l~~~-~~~~~ 271 (424)
T 2b9w_A 198 LWTWADGTQAMFEHLNATLEHPAERNVDITRITREDGK-VHIHT--TDW--DRESDVLVLTVPLEKFLDYSDAD-DDERE 271 (424)
T ss_dssp CBCCTTCHHHHHHHHHHHSSSCCBCSCCEEEEECCTTC-EEEEE--SSC--EEEESEEEECSCHHHHTTSBCCC-HHHHH
T ss_pred eEEeCChHHHHHHHHHHhhcceEEcCCEEEEEEEECCE-EEEEE--CCC--eEEcCEEEECCCHHHHhhccCCC-HHHHH
Confidence 46889999999999999998889999999999988775 87765 567 38999999999999998887653 44445
Q ss_pred hccCCCCCCEEEEEEEecCCccccccccCCCcCcceEEecCCCCCceeE-EEeccCCCCCCCCCCcEEEEEEecCCCCCC
Q 021616 129 ALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLG-TIYSSSLFPNRAPAGRVLLLNYIGGATNLG 207 (310)
Q Consensus 129 ~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~~~~~~~~-~~~~s~~~p~~~p~g~~~l~~~~~g~~~~~ 207 (310)
.+.++.+.++.+.. .+.... +.++.++|.+......+ .+|+...++. .| ..++++|+++. .+.
T Consensus 272 ~~~~~~~~~~~~~~-~~~~~~-----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~--~~~l~~~~~~~-~~~ 335 (424)
T 2b9w_A 272 YFSKIIHQQYMVDA-CLVKEY-----------PTISGYVPDNMRPERLGHVMVYYHRWAD-DP--HQIITTYLLRN-HPD 335 (424)
T ss_dssp HHTTCEEEEEEEEE-EEESSC-----------CSSEEECGGGGSGGGTTSCCEEEECCTT-CT--TSCEEEEEECC-BTT
T ss_pred HHhcCCcceeEEEE-EEeccC-----------CcccccccCCCCCcCCCcceEEeeecCC-CC--ceEEEEEeccC-CCc
Confidence 66777776644332 232221 11334566433222221 2333333432 12 24566777653 355
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCC----CCCCCCCChHHHHHHHHHHhhhcCCCCeEEeecccCC
Q 021616 208 ILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQ----AIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNYVAG 283 (310)
Q Consensus 208 ~~~~~~eel~~~~~~~l~~~~~~~~~~~p~~~~~~rw~~----a~p~~~~g~~~~~~~~~~~~~~~~~~~l~~aG~~~~g 283 (310)
+...+++++.+.++++|++ ++.. .+.......|.. +.++|..|+..++.. +. ..++|||||+|+..
T Consensus 336 ~~~~~~~~~~~~v~~~l~~-l~~~---~~~~~~~~~w~~~p~~~~~~~~~G~~~~~~~----~~--~~~~l~~aG~~~~~ 405 (424)
T 2b9w_A 336 YADKTQEECRQMVLDDMET-FGHP---VEKIIEEQTWYYFPHVSSEDYKAGWYEKVEG----MQ--GRRNTFYAGEIMSF 405 (424)
T ss_dssp BCCCCHHHHHHHHHHHHHH-TTCC---EEEEEEEEEEEEEEECCHHHHHTTHHHHHHH----TT--TGGGEEECSGGGSC
T ss_pred ccccChHHHHHHHHHHHHH-cCCc---ccccccccceeeeeccCHHHHhccHHHHHHH----Hh--CCCCceEecccccc
Confidence 6678899999999999998 5542 122222335542 223455565443322 22 24789999998763
Q ss_pred CchhHHHHHHHHHHHHHH
Q 021616 284 VALGRCVESAYEVASEVS 301 (310)
Q Consensus 284 ~gv~~ai~sG~~aA~~i~ 301 (310)
..+|+|+.||.++|++|+
T Consensus 406 g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 406 GNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp SSHHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHhc
Confidence 347999999999999875
No 24
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.73 E-value=4.5e-17 Score=157.64 Aligned_cols=247 Identities=11% Similarity=0.056 Sum_probs=157.7
Q ss_pred eeeeccchhhHHHHHHHHHh--ccceeeCceee--eEEEcCCC------cEEEEEECCCCe-EEEecCEEEEcCCchHHH
Q 021616 48 TVGSFRKGLTMLPEAISKRL--GSKVKLSWKLS--GVKKLDSG------EYSLTYETPEGL-VSLRSRSVVMTVPSYVAS 116 (310)
Q Consensus 48 ~~~~~~gG~~~L~~~L~~~l--~~~i~~~~~V~--~I~~~~~~------~~~v~~~~~~g~-~~~~ad~VI~a~p~~~~~ 116 (310)
..+.+.|||++|+++|++.+ +..|+++++|+ +|.+++++ .+.|++. .+|+ .++.||+||+|+|+..+.
T Consensus 338 ~~~~i~GG~~~L~~aLa~~l~~g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~-~~G~~~~~~aD~VIvTvP~~~L~ 416 (721)
T 3ayj_A 338 EYTLPVTENVEFIRNLFLKAQNVGAGKLVVQVRQERVANACHSGTASARAQLLSYD-SHNAVHSEAYDFVILAVPHDQLT 416 (721)
T ss_dssp EECCSSSSTHHHHHHHHHHHHHHTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEE-TTCCEEEEEESEEEECSCHHHHH
T ss_pred ceeEECCcHHHHHHHHHHhcccCCceEeCCEEEeeeEEECCCCCccccceEEEEEe-cCCceEEEEcCEEEECCCHHHHh
Confidence 46899999999999999998 67899999999 99987553 2777553 4552 368999999999999985
Q ss_pred h------c-----------------------cCC-C-C-------HHHHhhccCCCCCCEEEEEEEe-----cCCccccc
Q 021616 117 S------L-----------------------LRP-L-S-------VDAAGALSQFYYPPVAAVSVSY-----PKEAIRTE 153 (310)
Q Consensus 117 ~------l-----------------------l~~-~-~-------~~~~~~l~~~~~~~~~~v~l~~-----~~~~~~~~ 153 (310)
. + .++ + + ....++++++.|.+..+|.+.| ++++|...
T Consensus 417 ~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~~~ 496 (721)
T 3ayj_A 417 PIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVPQW 496 (721)
T ss_dssp HHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSCEE
T ss_pred hccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCccccc
Confidence 3 2 133 2 3 4567889999999999999999 88888631
Q ss_pred cccCCCcCc--ceEEecCCCCCceeEEEe-ccCCCCCCCCCC-cEEEEEEecCCCCCCC------CCCCHH-------HH
Q 021616 154 CLIDGELKG--FGQLHPRSQGVETLGTIY-SSSLFPNRAPAG-RVLLLNYIGGATNLGI------LSKKES-------EL 216 (310)
Q Consensus 154 ~~~~~~~~g--~g~l~~~~~~~~~~~~~~-~s~~~p~~~p~g-~~~l~~~~~g~~~~~~------~~~~~e-------el 216 (310)
.| .+..+ .+. ++..+.+ .+-...+..+++ ..+|..|..+..+..+ ..++++ ++
T Consensus 497 -------~g~~i~~s~-TD~--~~r~~~~~p~p~~~d~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~ 566 (721)
T 3ayj_A 497 -------RGEPIKAVV-SDS--GLAASYVVPSPIVEDGQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGM 566 (721)
T ss_dssp -------TTEECCEEE-ETT--TTEEEEEEECSCC----CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHH
T ss_pred -------CCCCceeee-cCC--CcceEEEeccCcccccCCCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHH
Confidence 11 12122 222 2222222 211000111222 3455556654422223 233333 34
Q ss_pred HHHHHHHHH--HHhCCCCC------------CCCcEEEEEecC-----CCCCCCCCChHHHHHHHHHH-----hhhcCCC
Q 021616 217 VEAVDRDLR--KMLINPNA------------KDPLVLGVRVWQ-----QAIPQFLVGHLDLLDAAKSS-----LRDNGYQ 272 (310)
Q Consensus 217 ~~~~~~~l~--~~~~~~~~------------~~p~~~~~~rw~-----~a~p~~~~g~~~~~~~~~~~-----~~~~~~~ 272 (310)
++.++++|+ ++++.... -.+.....+.|. +++..+.||.......+.+. +.. +..
T Consensus 567 ~~~~l~~la~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~dW~~dps~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~-~~g 645 (721)
T 3ayj_A 567 YRTMVNRAYRYVKYAGASNAQPWWFYQLLAEARTADRFVFDWTTNKTAGGFKLDMTGDHHQSNLCFRYHTHALAAS-LDN 645 (721)
T ss_dssp HHHHHHHTCCEECCTTCSSCEECHHHHHHHTSCSTTCEEEEGGGSTTSSSEECCBTTTHHHHHHHHHGGGGGGCTT-TCC
T ss_pred HHHHHHHHhhhccCccccccccchhhhhhhhcccCceEEEeCCCCCCCCccccCCCccchhhhhhhhhhhhccccC-CCC
Confidence 999999999 78875420 013345677885 34455677762211111122 222 347
Q ss_pred CeEEeecccC--CCchhHHHHHHHHHHHHHHHHhhh
Q 021616 273 GLFLGGNYVA--GVALGRCVESAYEVASEVSNFLSQ 306 (310)
Q Consensus 273 ~l~~aG~~~~--g~gv~~ai~sG~~aA~~i~~~l~~ 306 (310)
+|||||+++. +..++||+.||.+||..|...+..
T Consensus 646 ri~fAGe~~S~~~GWieGAl~Sa~~Aa~~i~~~~~~ 681 (721)
T 3ayj_A 646 RFFIASDSYSHLGGWLEGAFMSALNAVAGLIVRANR 681 (721)
T ss_dssp CEEECSGGGSSCTTSHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEeehhhccCCceehHHHHHHHHHHHHHHHHhcC
Confidence 8999999864 445999999999999999987643
No 25
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.72 E-value=8.3e-17 Score=148.86 Aligned_cols=214 Identities=14% Similarity=0.169 Sum_probs=149.0
Q ss_pred eccchhhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchHHHhcc--CCCCHHHHh
Q 021616 51 SFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLL--RPLSVDAAG 128 (310)
Q Consensus 51 ~~~gG~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll--~~~~~~~~~ 128 (310)
.+.+|++.|++.+++.++ +|++|++|++|+.++++ +.|++ .+| ++++||+||+|+|++++..+. ++.++...+
T Consensus 201 ~~~~g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~-v~v~~--~~g-~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~ 275 (431)
T 3k7m_X 201 VFSNGSADLVDAMSQEIP-EIRLQTVVTGIDQSGDV-VNVTV--KDG-HAFQAHSVIVATPMNTWRRIVFTPALPERRRS 275 (431)
T ss_dssp EETTCTHHHHHHHHTTCS-CEESSCCEEEEECSSSS-EEEEE--TTS-CCEEEEEEEECSCGGGGGGSEEESCCCHHHHH
T ss_pred hcCCcHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCe-EEEEE--CCC-CEEEeCEEEEecCcchHhheeeCCCCCHHHHH
Confidence 579999999999999888 99999999999998886 88776 577 369999999999999998874 455555566
Q ss_pred hccCCCCCCEEEEEEEecCCccccccccCCCcCcceEEecCCCCCceeEEEeccCCCCCCCCCCcEEEEEEecCCCCCCC
Q 021616 129 ALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGATNLGI 208 (310)
Q Consensus 129 ~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~p~~~p~g~~~l~~~~~g~~~~~~ 208 (310)
+++.+.+....+|++.|+.++. +++...+ .....+|++... ..+..++..++.+.. +
T Consensus 276 ~~~~~~~~~~~kv~~~~~~~~~-------------~i~~~~d---~~~~~~~~~~~~----~~~~~~l~~~~~g~~---~ 332 (431)
T 3k7m_X 276 VIEEGHGGQGLKILIHVRGAEA-------------GIECVGD---GIFPTLYDYCEV----SESERLLVAFTDSGS---F 332 (431)
T ss_dssp HHHHCCCCCEEEEEEEEESCCT-------------TEEEEBS---SSSSEEEEEEEC----SSSEEEEEEEEETTT---C
T ss_pred HHHhCCCcceEEEEEEECCCCc-------------CceEcCC---CCEEEEEeCcCC----CCCCeEEEEEecccc---C
Confidence 7777888889999999987642 1121111 112234443321 123456777776543 3
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecC------CCCCCCCCChHHHHHHHHHHhhhcCCCCeEEeecccC
Q 021616 209 LSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQ------QAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNYVA 282 (310)
Q Consensus 209 ~~~~~eel~~~~~~~l~~~~~~~~~~~p~~~~~~rw~------~a~p~~~~g~~~~~~~~~~~~~~~~~~~l~~aG~~~~ 282 (310)
...+.+ .+.+.|+++++.. .|..+..++|. +++..+.||... ...+.+.. +.++|||||+.+.
T Consensus 333 ~~~~~~----~~~~~l~~~~~~~---~~~~~~~~~W~~d~~~~G~~~~~~~g~~~---~~~~~l~~-p~g~~~fAGe~t~ 401 (431)
T 3k7m_X 333 DPTDIG----AVKDAVLYYLPEV---EVLGIDYHDWIADPLFEGPWVAPRVGQFS---RVHKELGE-PAGRIHFVGSDVS 401 (431)
T ss_dssp CTTCHH----HHHHHHHHHCTTC---EEEEEECCCTTTCTTTSSSSCCCCTTTTT---TSSGGGGS-CBTTEEECSGGGC
T ss_pred CCCCHH----HHHHHHHHhcCCC---CccEeEecccCCCCCCCCCCCCcCCCCCc---ccHHHHhC-CCCcEEEEehhhh
Confidence 223333 3456777787643 26677778995 355556677432 22234554 4679999997654
Q ss_pred ---CCchhHHHHHHHHHHHHHHHH
Q 021616 283 ---GVALGRCVESAYEVASEVSNF 303 (310)
Q Consensus 283 ---g~gv~~ai~sG~~aA~~i~~~ 303 (310)
...|+||+.||.+||++|+..
T Consensus 402 ~~~~g~~~GA~~sg~raa~~i~~~ 425 (431)
T 3k7m_X 402 LEFPGYIEGALETAECAVNAILHS 425 (431)
T ss_dssp SSSTTSHHHHHHHHHHHHHHHHHC
T ss_pred ccCCeEehHHHHHHHHHHHHHHhh
Confidence 234999999999999999864
No 26
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.48 E-value=3.5e-13 Score=122.84 Aligned_cols=175 Identities=13% Similarity=0.071 Sum_probs=121.7
Q ss_pred eeccchhhHHHHHHHHHhccceeeCceee-eEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchHHHhccCCCCHHHHh
Q 021616 50 GSFRKGLTMLPEAISKRLGSKVKLSWKLS-GVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSVDAAG 128 (310)
Q Consensus 50 ~~~~gG~~~L~~~L~~~l~~~i~~~~~V~-~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~ 128 (310)
.+++||+++|+++|++.++.+|++|++|+ +|.. .||+||+|+|++.+..+
T Consensus 192 ~~p~gG~~~l~~~l~~~~g~~I~l~~~V~~~i~~-------------------~~d~VI~a~p~~~~~~~---------- 242 (384)
T 2bi7_A 192 GMPKCGYTQMIKSILNHENIKVDLQREFIVEERT-------------------HYDHVFYSGPLDAFYGY---------- 242 (384)
T ss_dssp EEETTHHHHHHHHHHCSTTEEEEESCCCCGGGGG-------------------GSSEEEECSCHHHHTTT----------
T ss_pred EEECcCHHHHHHHHHhcCCCEEEECCeeehhhhc-------------------cCCEEEEcCCHHHHHHh----------
Confidence 38999999999999987777899999998 7631 29999999999998775
Q ss_pred hccCCCCCCEEEEEEEecCCccccccccCCCcCcceEEecCCCCCceeEEEeccCCCCCCCCCCcEEEEEEecCCCCCCC
Q 021616 129 ALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGATNLGI 208 (310)
Q Consensus 129 ~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~p~~~p~g~~~l~~~~~g~~~~~~ 208 (310)
.+..++|.++.++++.++ +... + . .++.++.. +.+...+++.+...|...+ ++++++..+++
T Consensus 243 ~lg~l~y~s~~~v~~~~d-~~~~-------~-~-~~~n~~~~-~~~~~ri~~~~~~~~~~~~-~~~~v~~e~~~------ 304 (384)
T 2bi7_A 243 QYGRLGYRTLDFKKFTYQ-GDYQ-------G-C-AVMNYCSV-DVPYTRITEHKYFSPWEQH-DGSVCYKEYSR------ 304 (384)
T ss_dssp TTCCCCEEEEEEEEEEEE-SCSS-------S-S-SEEEECST-TSSSSEEEEGGGGCTTSCC-SEEEEEEEEEE------
T ss_pred hcCCCCcceEEEEEEEeC-CCCC-------C-C-EEEEecCC-CCCeeeEEEeeccCCCCCC-CCEEEEEEEec------
Confidence 255789999999999987 3221 1 1 12234432 2333445544443354433 44555544332
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecC-CC---CCCCCCChHHHHHHHHHHhhhcCCCCeEEeecc--cC
Q 021616 209 LSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQ-QA---IPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNY--VA 282 (310)
Q Consensus 209 ~~~~~eel~~~~~~~l~~~~~~~~~~~p~~~~~~rw~-~a---~p~~~~g~~~~~~~~~~~~~~~~~~~l~~aG~~--~~ 282 (310)
.|. .. +|.++.++....+++++.+.. .++|+|||.+ +.
T Consensus 305 ----------------------------------~~~~~~~p~ypv~~~~~~~~~~~~~~~~~~--~~~~~~~Gr~~~~~ 348 (384)
T 2bi7_A 305 ----------------------------------ACEENDIPYYPIRQMGEMALLEKYLSLAEN--ETNITFVGRLGTYR 348 (384)
T ss_dssp ----------------------------------ECCTTCCCCEECCCHHHHHHHHHHHHHHTT--CSSEEECHHHHTTC
T ss_pred ----------------------------------cccCCCccccccCChhHHHHHHHHHHHHhc--CCCEEEccccEEEE
Confidence 121 23 455555788888887776642 4799999986 45
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhhc
Q 021616 283 GVALGRCVESAYEVASEVSNFLSQY 307 (310)
Q Consensus 283 g~gv~~ai~sG~~aA~~i~~~l~~~ 307 (310)
+.++++||.||+++|++|++.+...
T Consensus 349 ~~~~~d~i~sa~~~a~~~~~~~~~~ 373 (384)
T 2bi7_A 349 YLDMDVTIAEALKTAEVYLNSLTEN 373 (384)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eCCHHHHHHHHHHHHHHHhhhhhcc
Confidence 7889999999999999999877543
No 27
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.47 E-value=4.5e-14 Score=129.44 Aligned_cols=184 Identities=13% Similarity=0.054 Sum_probs=124.9
Q ss_pred eccchhhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEE-ecCEEEEcCCchHHHhccCCCCHHHHhh
Q 021616 51 SFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSL-RSRSVVMTVPSYVASSLLRPLSVDAAGA 129 (310)
Q Consensus 51 ~~~gG~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~-~ad~VI~a~p~~~~~~ll~~~~~~~~~~ 129 (310)
+++||+++|+++|++.++.+|++|++|++|... | + ++ .||+||+|+|++.+.++ .
T Consensus 199 ~p~gG~~~l~~~l~~~~g~~I~l~~~V~~I~~~----v-------~---~~~~aD~VI~t~p~~~l~~~----------~ 254 (399)
T 1v0j_A 199 LPTDGYTAWLQNMAADHRIEVRLNTDWFDVRGQ----L-------R---PGSPAAPVVYTGPLDRYFDY----------A 254 (399)
T ss_dssp CBTTHHHHHHHHHTCSTTEEEECSCCHHHHHHH----H-------T---TTSTTCCEEECSCHHHHTTT----------T
T ss_pred cccccHHHHHHHHHhcCCeEEEECCchhhhhhh----h-------h---hcccCCEEEECCcHHHHHhh----------h
Confidence 889999999999999887899999999999631 2 1 24 79999999999998765 3
Q ss_pred ccCCCCCCEEEEEEEecCCccccccccCCCcCcceEEecCCCCCceeEEEeccCCCCCCC-CCCcEEEEEEecCCCCCCC
Q 021616 130 LSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRA-PAGRVLLLNYIGGATNLGI 208 (310)
Q Consensus 130 l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~p~~~-p~g~~~l~~~~~g~~~~~~ 208 (310)
+..++|.++..+++.++.+... + . ....++.. +.+...+++.++..|..+ |+++.+++..+...|.
T Consensus 255 l~~l~y~s~~~~~~~~~~~~~~-------~-~-~~~~~~~~-~~~~~ri~~~~~~~~~~~~~~~~~~v~~e~~~~~~--- 321 (399)
T 1v0j_A 255 EGRLGWRTLDFEVEVLPIGDFQ-------G-T-AVMNYNDL-DVPYTRIHEFRHFHPERDYPTDKTVIMREYSRFAE--- 321 (399)
T ss_dssp TCCCCEEEEEEEEEEESSSCSS-------S-S-SEEEECCT-TSSCSEEEEGGGGCTTSCCCSSCEEEEEEEEEECC---
T ss_pred hCCCCcceEEEEEEEEccccCC-------C-C-eEEEeCCC-CCCcceeEeecCCCCCCcCCCCCeEEEEeeccccc---
Confidence 5678999988899998764321 1 1 12334432 233445555544335554 4455666654432110
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCChHHHHHHHHHHhhhcCC---CCeEEeecc--cCC
Q 021616 209 LSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGY---QGLFLGGNY--VAG 283 (310)
Q Consensus 209 ~~~~~eel~~~~~~~l~~~~~~~~~~~p~~~~~~rw~~a~p~~~~g~~~~~~~~~~~~~~~~~---~~l~~aG~~--~~g 283 (310)
+ .-...+|.++.++...+++++..+.. . ++|+|||++ +.+
T Consensus 322 ---------------------------~------~~~~~ypv~~~~~~~~~~~~~~~~~~--~~~~~~v~~~G~~~~~~~ 366 (399)
T 1v0j_A 322 ---------------------------D------DDEPYYPINTEADRALLATYRARAKS--ETASSKVLFGGRLGTYQY 366 (399)
T ss_dssp ---------------------------T------TSCCCEECCCHHHHHHHHHHHHHHHH--HHHHHCEEECHHHHHTCC
T ss_pred ---------------------------C------CCccccccCcHHHHHHHHHHHHHHHh--ccccCCEEEccceEEEEe
Confidence 0 00112455555677777777665542 3 699999986 567
Q ss_pred CchhHHHHHHHHHHHHHHHHhhh
Q 021616 284 VALGRCVESAYEVASEVSNFLSQ 306 (310)
Q Consensus 284 ~gv~~ai~sG~~aA~~i~~~l~~ 306 (310)
.++++||.||+++|++|.+....
T Consensus 367 ~~~e~~i~sa~~~a~~l~~~~~~ 389 (399)
T 1v0j_A 367 LDMHMAIASALNMYDNVLAPHLR 389 (399)
T ss_dssp CCHHHHHHHHHHHHHHTHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHhhhhhc
Confidence 78999999999999999875543
No 28
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.42 E-value=8.6e-13 Score=119.59 Aligned_cols=176 Identities=11% Similarity=0.022 Sum_probs=118.4
Q ss_pred eeccchhhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchHHHhccCCCCHHHHhh
Q 021616 50 GSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSVDAAGA 129 (310)
Q Consensus 50 ~~~~gG~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~ 129 (310)
.+++||+++|+++|++. .+|++|++|++|.. . | .+.||+||+|+|++.+..+ .
T Consensus 188 ~~p~gG~~~l~~~l~~g--~~i~l~~~V~~i~~---~-v-----------~~~~D~VV~a~p~~~~~~~----------~ 240 (367)
T 1i8t_A 188 GIPVGGYTKLIEKMLEG--VDVKLGIDFLKDKD---S-L-----------ASKAHRIIYTGPIDQYFDY----------R 240 (367)
T ss_dssp ECBTTCHHHHHHHHHTT--SEEECSCCGGGSHH---H-H-----------HTTEEEEEECSCHHHHTTT----------T
T ss_pred cccCCCHHHHHHHHhcC--CEEEeCCceeeech---h-h-----------hccCCEEEEeccHHHHHHH----------h
Confidence 38899999999999984 58999999998851 1 2 1369999999999987643 3
Q ss_pred ccCCCCCCEEEEEEEecCCccccccccCCCcCcceEEecCCCCCceeEEEeccCCCCCCCCCCcEEEEEEecCCCCCCCC
Q 021616 130 LSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGATNLGIL 209 (310)
Q Consensus 130 l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~p~~~p~g~~~l~~~~~g~~~~~~~ 209 (310)
+..++|.++.++++.+++..+. . . .+..++. .+.+...+++.+...|.. .++++++.-+.+.|.
T Consensus 241 l~~l~y~s~~~v~~~~d~~~~~-----~---~-~~~~~~~-~~~~~~ri~~~~~~~~~~--~~~~~v~~e~~~~~~---- 304 (367)
T 1i8t_A 241 FGALEYRSLKFETERHEFPNFQ-----G---N-AVINFTD-ANVPYTRIIEHKHFDYVE--TKHTVVTKEYPLEWK---- 304 (367)
T ss_dssp TCCCCEEEEEEEEEEESSSCSS-----S---S-SEEEECC-TTSSCSEEEEGGGGSCCC--CSCEEEEEEEEEECC----
T ss_pred hCCCCCceEEEEEEEeccccCC-----C---C-eEEEeCC-CCCceeeEEeecccCCCC--CCCEEEEEEEecccC----
Confidence 5679999999999999875431 1 1 2233442 233455566555544442 234555443322110
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCChHHHHHHHHHHhhhcCCCCeEEeecc--cCCCchh
Q 021616 210 SKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNY--VAGVALG 287 (310)
Q Consensus 210 ~~~~eel~~~~~~~l~~~~~~~~~~~p~~~~~~rw~~a~p~~~~g~~~~~~~~~~~~~~~~~~~l~~aG~~--~~g~gv~ 287 (310)
+ +-...+|.++.++...++++++.+.. .+|++|||.+ +.+.+++
T Consensus 305 --------------------------~------~~~p~ypv~~~~~~~~~~~~~~~~~~--~~~~~~~Gr~~~~~y~~~~ 350 (367)
T 1i8t_A 305 --------------------------V------GDEPYYPVNDNKNMELFKKYRELASR--EDKVIFGGRLAEYKYYDMH 350 (367)
T ss_dssp --------------------------T------TSCCCEECCSHHHHHHHHHHHHHHHH--CTTEEECSTTTTTSCCCHH
T ss_pred --------------------------C------CCeeecccCChhHHHHHHHHHHHHhc--CCCEEEcccceeeEecCHH
Confidence 0 01122444555666666677665553 5899999986 6678899
Q ss_pred HHHHHHHHHHHHHHH
Q 021616 288 RCVESAYEVASEVSN 302 (310)
Q Consensus 288 ~ai~sG~~aA~~i~~ 302 (310)
+||.||+++|++|++
T Consensus 351 d~i~sa~~~a~~~~~ 365 (367)
T 1i8t_A 351 QVISAALYQVKNIMS 365 (367)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999864
No 29
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.01 E-value=5.5e-10 Score=90.71 Aligned_cols=108 Identities=13% Similarity=0.057 Sum_probs=78.6
Q ss_pred EEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEE--EEEecCC------CCCCCCCChHHHHHHHHHH
Q 021616 194 VLLLNYIGGATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVL--GVRVWQQ------AIPQFLVGHLDLLDAAKSS 265 (310)
Q Consensus 194 ~~l~~~~~g~~~~~~~~~~~eel~~~~~~~l~~~~~~~~~~~p~~~--~~~rw~~------a~p~~~~g~~~~~~~~~~~ 265 (310)
.+|.+|+.+..+..+..++++++++.++++|+++||... ..+... ..++|.. ++..+.+|.... +.+.
T Consensus 37 ~~L~~~~~g~~A~~~~~l~~~e~~~~~l~~L~~~~g~~~-~~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~---~~~~ 112 (181)
T 2e1m_C 37 VVLAAYSWSDDAARWDSFDDAERYGYALENLQSVHGRRI-EVFYTGAGQTQSWLRDPYACGEAAVYTPHQMTA---FHLD 112 (181)
T ss_dssp EEEEEEEEHHHHHHHTTSCTTTTHHHHHHHHHHHHCGGG-GGTEEEEEEEEESSSCTTTSSSEECCCTTHHHH---HHHH
T ss_pred EEEEEEcCChHHHHHHcCCHHHHHHHHHHHHHHHhCCCc-HhhccCcceecccCCCCCCCCcccCcCCCchHH---HHHH
Confidence 577778866555556678999999999999999997542 223356 7889953 344466776532 2334
Q ss_pred hhhcCCCCeEEeecccC--CCchhHHHHHHHHHHHHHHHHhhh
Q 021616 266 LRDNGYQGLFLGGNYVA--GVALGRCVESAYEVASEVSNFLSQ 306 (310)
Q Consensus 266 ~~~~~~~~l~~aG~~~~--g~gv~~ai~sG~~aA~~i~~~l~~ 306 (310)
+.. +..+|||||+++. ...|++|+.||.++|++|++.+..
T Consensus 113 l~~-p~grl~FAGe~ts~~~g~~eGAl~SG~raA~~i~~~l~~ 154 (181)
T 2e1m_C 113 VVR-PEGPVYFAGEHVSLKHAWIEGAVETAVRAAIAVNEAPVG 154 (181)
T ss_dssp HHS-CBTTEEECSGGGTTSTTSHHHHHHHHHHHHHHHHTCCC-
T ss_pred HhC-CCCcEEEEEHHHcCCccCHHHHHHHHHHHHHHHHHHhcc
Confidence 444 4589999999976 445999999999999999986643
No 30
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.75 E-value=1.4e-07 Score=87.54 Aligned_cols=196 Identities=13% Similarity=0.078 Sum_probs=111.8
Q ss_pred eeccchhhHHHHHHHHHh---ccceeeCceeeeEEEc--CCCcEEEEEECCCCeEEEecCEEEEcCCchHHHhccCCCCH
Q 021616 50 GSFRKGLTMLPEAISKRL---GSKVKLSWKLSGVKKL--DSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSV 124 (310)
Q Consensus 50 ~~~~gG~~~L~~~L~~~l---~~~i~~~~~V~~I~~~--~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~~~ 124 (310)
.+++||++.|+++|++.+ +++|+++++|++|... +++.+.|.+ +| +++.||+||+|+++..-
T Consensus 235 ~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~---~g-~~~~ad~VV~a~~~~~~--------- 301 (453)
T 2bcg_G 235 LYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT---KL-GTFKAPLVIADPTYFPE--------- 301 (453)
T ss_dssp EEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE---TT-EEEECSCEEECGGGCGG---------
T ss_pred EeeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE---CC-eEEECCEEEECCCccch---------
Confidence 488999999999999876 5689999999999987 553234543 46 47899999999988621
Q ss_pred HHHhhccCCC-CCCEEEEEEEecCCccccccccCCCcCcceEEecCCC--CCceeEEEeccCCCCCCCCCCcEEEEEEec
Q 021616 125 DAAGALSQFY-YPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQ--GVETLGTIYSSSLFPNRAPAGRVLLLNYIG 201 (310)
Q Consensus 125 ~~~~~l~~~~-~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~~--~~~~~~~~~~s~~~p~~~p~g~~~l~~~~~ 201 (310)
.+++.. + .+..+.+ ++++. .+ .+....+.++++... ..+..-+...|... ..+|+|+.++.+++.
T Consensus 302 ----~l~~~~~~-~~~~~~i-~~~~~-~~----~~~~~~~~ii~~~~~~~~~~~~~v~~~s~~d-~~aP~G~~~~~v~~~ 369 (453)
T 2bcg_G 302 ----KCKSTGQR-VIRAICI-LNHPV-PN----TSNADSLQIIIPQSQLGRKSDIYVAIVSDAH-NVCSKGHYLAIISTI 369 (453)
T ss_dssp ----GEEEEEEE-EEEEEEE-ESSCC-TT----STTCSSEEEEECGGGTTCSSCEEEEEEEGGG-TSSCTTCEEEEEEEE
T ss_pred ----hhcccCCc-ceeEEEE-Ecccc-CC----CCCCccEEEEeCccccCCCCCEEEEEeCCCC-CCCCCCcEEEEEEEe
Confidence 111111 1 2222222 55532 10 001122344555321 12222233333322 467999888877764
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCChHHHHHHHHHHhhhcCCCCeEEeeccc
Q 021616 202 GATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNYV 281 (310)
Q Consensus 202 g~~~~~~~~~~~eel~~~~~~~l~~~~~~~~~~~p~~~~~~rw~~a~p~~~~g~~~~~~~~~~~~~~~~~~~l~~aG~~~ 281 (310)
... .+.++-++.+++ ++.+.. -..+.+..+ |.+-. . . ..+|||+||++.
T Consensus 370 ~~~------~~~~~~l~~~~~---~l~~~~----~~~~~~~~~------~~~~~--------~--~--~~~~~~~~~~~~ 418 (453)
T 2bcg_G 370 IET------DKPHIELEPAFK---LLGPIE----EKFMGIAEL------FEPRE--------D--G--SKDNIYLSRSYD 418 (453)
T ss_dssp CCS------SCHHHHTHHHHG---GGCSCS----EEEEEEEEE------EEESS--------C--S--TTTSEEECCCCC
T ss_pred cCC------CCHHHHHHHHHH---HhhhHH----Hhhccchhe------eeecC--------C--C--CCCCEEECCCCC
Confidence 321 122222222222 222211 112233321 11110 0 0 237999999998
Q ss_pred CCCchhHHHHHHHHHHHHHH
Q 021616 282 AGVALGRCVESAYEVASEVS 301 (310)
Q Consensus 282 ~g~gv~~ai~sG~~aA~~i~ 301 (310)
.....++|+.+++.++++|.
T Consensus 419 ~~~~~~~~~~~~~~~~~~~~ 438 (453)
T 2bcg_G 419 ASSHFESMTDDVKDIYFRVT 438 (453)
T ss_dssp SCSBSHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHH
Confidence 78888999999999999997
No 31
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.69 E-value=6.9e-08 Score=87.87 Aligned_cols=173 Identities=11% Similarity=0.016 Sum_probs=115.0
Q ss_pred eeccchhhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchHHHhccCCCCHHHHhh
Q 021616 50 GSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSVDAAGA 129 (310)
Q Consensus 50 ~~~~gG~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~ 129 (310)
..++||+++|+++|++..+.+|++|++|.++ + .++.+|+||+|+|++.+... .
T Consensus 216 g~P~gGy~~l~e~l~~~~g~~V~l~~~v~~~----------------~-~~~~~d~vI~T~P~d~~~~~----------~ 268 (397)
T 3hdq_A 216 AMPLHGYTRMFQNMLSSPNIKVMLNTDYREI----------------A-DFIPFQHMIYTGPVDAFFDF----------C 268 (397)
T ss_dssp EEETTCHHHHHHHHTCSTTEEEEESCCGGGT----------------T-TTSCEEEEEECSCHHHHTTT----------T
T ss_pred eccCCCHHHHHHHHHhccCCEEEECCeEEec----------------c-ccccCCEEEEcCCHHHHHHH----------h
Confidence 4689999999999998877899999999843 1 13579999999999887421 3
Q ss_pred ccCCCCCCEEEEEEEecCCccccccccCCCcCcceEEecCCCCCceeEEEeccCCCCCCCCCCcEEEEEEecCCCCCCCC
Q 021616 130 LSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGATNLGIL 209 (310)
Q Consensus 130 l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~p~~~p~g~~~l~~~~~g~~~~~~~ 209 (310)
+.+++|.++..+.+.++.+.+. ....+-+|..+ ++..++.-+. |++. +.++++++.-++..
T Consensus 269 ~g~L~yrsl~~~~~~~~~~~~~---------~~~~vn~~d~~--p~tRi~e~k~-~~~~-~~~~t~i~~Ey~~~------ 329 (397)
T 3hdq_A 269 YGKLPYRSLEFRHETHDTEQLL---------PTGTVNYPNDY--AYTRVSEFKH-ITGQ-RHHQTSVVYEYPRA------ 329 (397)
T ss_dssp TCCCCEEEEEEEEEEESSSCSC---------SSSEEECSSSS--SCSEEEEHHH-HHCC-CCSSEEEEEEEEES------
T ss_pred cCCCCCceEEEEEEEeccccCC---------CCeEEEeCCCC--cceEEEeecc-cCCC-CCCCEEEEEEECCC------
Confidence 5678999999999999876432 11234455433 5555554333 2333 23456665544320
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCChHHHHHHHHHHhhhcCCCCeEEeecc--cCCCchh
Q 021616 210 SKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNY--VAGVALG 287 (310)
Q Consensus 210 ~~~~eel~~~~~~~l~~~~~~~~~~~p~~~~~~rw~~a~p~~~~g~~~~~~~~~~~~~~~~~~~l~~aG~~--~~g~gv~ 287 (310)
+. .| .+|.+.........++++.... .++|+|+|.. +....|+
T Consensus 330 -------------------~~----~p----------yYpv~~~~~~~~~~~y~~~a~~--~~~v~~~GRlg~y~Y~~md 374 (397)
T 3hdq_A 330 -------------------EG----DP----------YYPVPRPENAELYKKYEALADA--AQDVTFVGRLATYRYYNMD 374 (397)
T ss_dssp -------------------SS----SC----------CEECCSHHHHHHHHHHHHHHHH--CTTEEECSTTTTTCCCCHH
T ss_pred -------------------CC----cc----------ccccCchhHHHHHHHHHHHHhc--CCCEEEcccceEEEeccHH
Confidence 00 11 1555555555555555544332 4799999996 3357799
Q ss_pred HHHHHHHHHHHHHHHH
Q 021616 288 RCVESAYEVASEVSNF 303 (310)
Q Consensus 288 ~ai~sG~~aA~~i~~~ 303 (310)
.+|.+|..+++++++.
T Consensus 375 ~~i~~al~~~~~~~~~ 390 (397)
T 3hdq_A 375 QVVAQALATFRRLQGQ 390 (397)
T ss_dssp HHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999998764
No 32
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.61 E-value=1.2e-06 Score=80.82 Aligned_cols=197 Identities=11% Similarity=0.059 Sum_probs=112.7
Q ss_pred eeeccchhhHHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchHHHhccCCCCHH
Q 021616 49 VGSFRKGLTMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSVD 125 (310)
Q Consensus 49 ~~~~~gG~~~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~~~~ 125 (310)
++++.||++.|+++|++.+ +++|+++++|++|...+++ +.... .+| +++.||+||+|+++... .+
T Consensus 226 ~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~-v~~v~--~~g-~~~~ad~VV~a~~~~~~--~~------ 293 (433)
T 1d5t_A 226 YLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENGK-VVGVK--SEG-EVARCKQLICDPSYVPD--RV------ 293 (433)
T ss_dssp EEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETTE-EEEEE--ETT-EEEECSEEEECGGGCGG--GE------
T ss_pred EEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCE-EEEEE--ECC-eEEECCEEEECCCCCcc--cc------
Confidence 6789999999999998765 5689999999999988764 54322 256 47999999999988632 11
Q ss_pred HHhhccCCCCCCEEEEEEEecCCccccccccCCCcCcceEEecCCC--CCceeEEEeccCCCCCCCCCCcEEEEEEecCC
Q 021616 126 AAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQ--GVETLGTIYSSSLFPNRAPAGRVLLLNYIGGA 203 (310)
Q Consensus 126 ~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~~--~~~~~~~~~~s~~~p~~~p~g~~~l~~~~~g~ 203 (310)
+++.. .+..+.+ ++++. .. + +....+.++++... ..+...+...| ..|..+|+|+.++.++....
T Consensus 294 -----~~~~~-~~~~~~i-l~~~~-~~--~--~~~~~~~i~~~~~~~~~~~~~~v~~~s-~d~~~aP~G~~~~~~~~~~p 360 (433)
T 1d5t_A 294 -----RKAGQ-VIRIICI-LSHPI-KN--T--NDANSCQIIIPQNQVNRKSDIYVCMIS-YAHNVAAQGKYIAIASTTVE 360 (433)
T ss_dssp -----EEEEE-EEEEEEE-ESSCC-TT--S--TTCSSEEEEECGGGTTCSSCEEEEEEE-GGGTSSCTTCEEEEEEEECC
T ss_pred -----cccCc-ceeEEEE-EcCcc-cc--c--CCCceEEEEeCccccCCCCCEEEEEEC-CCCcccCCCCEEEEEEEecC
Confidence 11111 1222222 55432 10 0 00122344555322 12333344444 45667899988887766432
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCChHHHHHHHHHHhhhcCCCCeEEeecccCC
Q 021616 204 TNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNYVAG 283 (310)
Q Consensus 204 ~~~~~~~~~~eel~~~~~~~l~~~~~~~~~~~p~~~~~~rw~~a~p~~~~g~~~~~~~~~~~~~~~~~~~l~~aG~~~~g 283 (310)
. .+.++-++.++ +++.+.. . ....+.. .|.+-. . . ..+|||+|+++..+
T Consensus 361 ~------~~~~~~l~~~~---~~l~~~~--~--~~~~~~~------~~~~~~--------~-~---~~~~~~~~~~~d~~ 409 (433)
T 1d5t_A 361 T------TDPEKEVEPAL---GLLEPID--Q--KFVAISD------LYEPID--------D-G---SESQVFCSCSYDAT 409 (433)
T ss_dssp S------SCHHHHTHHHH---TTTCSCS--E--EEEEEEE------EEEESC--------C-S---TTTCEEECCCCCSC
T ss_pred C------CCHHHHHHHHH---HHhhhHH--h--heeccce------eeeecC--------C-C---CCCCEEECCCCCcc
Confidence 1 12222122222 2221111 0 1222332 121110 0 0 23789999999878
Q ss_pred CchhHHHHHHHHHHHHHH
Q 021616 284 VALGRCVESAYEVASEVS 301 (310)
Q Consensus 284 ~gv~~ai~sG~~aA~~i~ 301 (310)
...++|+.+++.+-++|.
T Consensus 410 ~~~e~~~~~~~~~~~~~~ 427 (433)
T 1d5t_A 410 THFETTCNDIKDIYKRMA 427 (433)
T ss_dssp SBSHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHh
Confidence 888999999999988875
No 33
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.35 E-value=5.3e-05 Score=63.68 Aligned_cols=87 Identities=15% Similarity=0.199 Sum_probs=64.9
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCChHHHHHHHHHHhhhcCCCCeEEeecccCCCchhHH
Q 021616 210 SKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNYVAGVALGRC 289 (310)
Q Consensus 210 ~~~~eel~~~~~~~l~~~~~~~~~~~p~~~~~~rw~~a~p~~~~g~~~~~~~~~~~~~~~~~~~l~~aG~~~~g~gv~~a 289 (310)
.....+..+.....+....+.. ...+.....++|+.+.|....... .... ..++|++|||++.|.++++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~w~~a~~~~~~~~~--------~~~~-~~~~v~l~GDa~~g~gv~~A 312 (336)
T 3kkj_A 243 DASREQVIEHLHGAFAELIDCT-MPAPVFSLAHRWLYARPAGAHEWG--------ALSD-ADLGIYVCGDWCLSGRVEGA 312 (336)
T ss_dssp TSCHHHHHHHHHHHHHTTCSSC-CCCCSEEEEEEEEEEEESSCCCCS--------SEEE-TTTTEEECCGGGTTSSHHHH
T ss_pred cccchhhhhhhhhhhhhhccCC-cCcchheeccceeecccccccCcc--------ceee-CCCCEEEEecccCCcCHHHH
Confidence 4455666777777777777655 367888899999877665433211 1111 24799999999999999999
Q ss_pred HHHHHHHHHHHHHHhhh
Q 021616 290 VESAYEVASEVSNFLSQ 306 (310)
Q Consensus 290 i~sG~~aA~~i~~~l~~ 306 (310)
+.||+.||+.|++.|.+
T Consensus 313 ~~sG~~aA~~I~~~L~~ 329 (336)
T 3kkj_A 313 WLSGQEAARRLLEHLQL 329 (336)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 99999999999999865
No 34
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.99 E-value=0.0012 Score=63.26 Aligned_cols=212 Identities=14% Similarity=0.084 Sum_probs=112.8
Q ss_pred eeeeccchhhHHHHHHHHHh---ccceeeCceeeeEEEcCC-CcEEEEEECCCCeEEEecCEEEEcCCchHHHhccCCCC
Q 021616 48 TVGSFRKGLTMLPEAISKRL---GSKVKLSWKLSGVKKLDS-GEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLS 123 (310)
Q Consensus 48 ~~~~~~gG~~~L~~~L~~~l---~~~i~~~~~V~~I~~~~~-~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~~ 123 (310)
.++++.|||+.|+++|++.+ |++|+++++|++|...++ |++.... +.+| +++.||+||++. .. ++..
T Consensus 369 g~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~-~~~G-e~i~A~~VVs~~--~~----lp~~- 439 (650)
T 1vg0_A 369 PFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVI-DQFG-QRIISKHFIIED--SY----LSEN- 439 (650)
T ss_dssp SEEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEE-ETTS-CEEECSEEEEEG--GG----BCTT-
T ss_pred ceEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEE-eCCC-CEEEcCEEEECh--hh----cCHh-
Confidence 56889999999999996654 579999999999998762 3343332 3678 579999999932 22 2211
Q ss_pred HHHHhhccCCCCCCEEEEEEEecCCccccccccCCCcCcce-EEecCCC-CCceeEEEeccCCCCCCCCCCcEEEEEEec
Q 021616 124 VDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFG-QLHPRSQ-GVETLGTIYSSSLFPNRAPAGRVLLLNYIG 201 (310)
Q Consensus 124 ~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g-~l~~~~~-~~~~~~~~~~s~~~p~~~p~g~~~l~~~~~ 201 (310)
. ..+.++..+..+++.++++.... . .....+ .++|..+ ..+..-++..|. .+...|+|+.++.+..-
T Consensus 440 --~---~~~~~~~~v~R~i~i~~~pi~~~----~-~~~~~~~iiiP~~~g~~~~V~i~~~Ss-~~~~cP~G~~Vv~lst~ 508 (650)
T 1vg0_A 440 --T---CSRVQYRQISRAVLITDGSVLRT----D-ADQQVSILTVPAEEPGSFAVRVIELCS-STMTCMKGTYLVHLTCM 508 (650)
T ss_dssp --T---TTTCCCEEEEEEEEEESSCSSCC----S-CCCCCEEEEECCSSTTSCCEEEEEECG-GGTSSCTTCEEEEEEEE
T ss_pred --H---hccccccceEEEEEEecCCCCCc----C-CCcceEEEEccCccCCCCCEEEEEeCC-CCCCCCCCCEEEEEEee
Confidence 1 12234556777888888753210 0 010123 2345443 222222322232 44567889876654321
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCC--------CCCc--EEEEEecCCCCCCCCCChHHHHHHHHHHhhhcCC
Q 021616 202 GATNLGILSKKESELVEAVDRDLRKMLINPNA--------KDPL--VLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGY 271 (310)
Q Consensus 202 g~~~~~~~~~~~eel~~~~~~~l~~~~~~~~~--------~~p~--~~~~~rw~~a~p~~~~g~~~~~~~~~~~~~~~~~ 271 (310)
. ..+.+..++.+++ ++++.... ..|. |.-....... +.+. ...... ..
T Consensus 509 ---~----~~~~~~eLe~~l~---~L~~~~~~~~~~~~~~~~~~vLws~~~~~~~~---~~~~--------~~~~~~-~~ 566 (650)
T 1vg0_A 509 ---S----SKTAREDLERVVQ---KLFTPYTEIEAENEQVEKPRLLWALYFNMRDS---SDIS--------RDCYND-LP 566 (650)
T ss_dssp ---C----SSCHHHHHHHHHH---HHCBSCSCCC-------CCBEEEEEEEEEEEC---TTCC--------GGGSSS-CC
T ss_pred ---c----CCCHHHHHHHHHH---HHhccccccccccccccCCceEEEEEEEeecc---cccc--------cccccC-CC
Confidence 1 1122333343333 34332210 1222 2221122111 1111 001111 23
Q ss_pred CCeEEeecccCCCchhHHHHHHHHHHHHHH
Q 021616 272 QGLFLGGNYVAGVALGRCVESAYEVASEVS 301 (310)
Q Consensus 272 ~~l~~aG~~~~g~gv~~ai~sG~~aA~~i~ 301 (310)
.||++|-.+-.....++++..++.+-++|.
T Consensus 567 ~ni~~~~~~d~~~~fe~~v~~~~~i~~~i~ 596 (650)
T 1vg0_A 567 SNVYVCSGPDSGLGNDNAVKQAETLFQQIC 596 (650)
T ss_dssp TTEEEECCCCSSSSSHHHHHHHHHHHHHHS
T ss_pred CCEEEeCCCCCccCHHHHHHHHHHHHHHHc
Confidence 689998877556778888888888777764
No 35
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.74 E-value=3.1e-05 Score=58.63 Aligned_cols=105 Identities=13% Similarity=0.107 Sum_probs=59.2
Q ss_pred EEEecCEEEEcCCchHHHhc-c-CCCCHHHHhhccCCCCCCEEEEEEEecCCccccccccCCCcCcceEEecCCCCCcee
Q 021616 99 VSLRSRSVVMTVPSYVASSL-L-RPLSVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETL 176 (310)
Q Consensus 99 ~~~~ad~VI~a~p~~~~~~l-l-~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~~~~~~~ 176 (310)
++++||+||+|+|+.++..+ + +++++...+++++++|.+..++.+.|++++|.+ ++..+
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~--------~~~~g----------- 64 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRFVKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWEF--------TEADW----------- 64 (130)
T ss_dssp EEEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGC--------CHHHH-----------
T ss_pred eEEEcCEEEEcCCHHHHhcCcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCCC--------CCccc-----------
Confidence 36899999999999999877 3 566667788899999999999999999999862 11111
Q ss_pred EEEeccCCCCCCCCCCcEEEEEEec-CCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 021616 177 GTIYSSSLFPNRAPAGRVLLLNYIG-GATNLGILSKKESELVEAVDRDLRKMLINP 231 (310)
Q Consensus 177 ~~~~~s~~~p~~~p~g~~~l~~~~~-g~~~~~~~~~~~eel~~~~~~~l~~~~~~~ 231 (310)
+.+ .++.. .| ++.+|++ |..+..+..+++ +-.+.++..|..++|..
T Consensus 65 ----d~s-~~~~~-pg--~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~~ 111 (130)
T 2e1m_B 65 ----KRE-LDAIA-PG--LYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPSV 111 (130)
T ss_dssp ----HHH-HHHHS-TT--HHHHHHHHCCCSCCCC----------------------
T ss_pred ----ccc-CCCCC-Ce--EEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCCC
Confidence 100 00011 13 5556774 776777777765 55677888888888754
No 36
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.24 E-value=0.00052 Score=63.67 Aligned_cols=63 Identities=16% Similarity=0.090 Sum_probs=49.0
Q ss_pred eeeeccchhhHHHHHHHHHh---ccceeeCceeeeEEE-cCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 48 TVGSFRKGLTMLPEAISKRL---GSKVKLSWKLSGVKK-LDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 48 ~~~~~~gG~~~L~~~L~~~l---~~~i~~~~~V~~I~~-~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
.+.+++||++.|+++|++.+ +++|+++++|++|.. .++..+.|.+ .+| +++.||+||+++...
T Consensus 247 ~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~--~~G-~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 247 PFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKS--SDG-EIAYCDKVICDPSYV 313 (475)
T ss_dssp SEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEE--TTS-CEEEEEEEEECGGGC
T ss_pred ceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEE--CCC-cEEECCEEEECCCcc
Confidence 46789999999999998775 468999999999998 4443345654 677 479999999998653
No 37
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.11 E-value=0.055 Score=48.37 Aligned_cols=54 Identities=15% Similarity=0.225 Sum_probs=43.1
Q ss_pred HHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 58 MLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 58 ~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
.|-+.|.+.++.+|+++++|++++..+++.+.|++ +|| ++++||.||-|--...
T Consensus 113 ~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~--~dG-~~~~adlvVgADG~~S 166 (412)
T 4hb9_A 113 ELKEILNKGLANTIQWNKTFVRYEHIENGGIKIFF--ADG-SHENVDVLVGADGSNS 166 (412)
T ss_dssp HHHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEE--TTS-CEEEESEEEECCCTTC
T ss_pred HHHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEE--CCC-CEEEeeEEEECCCCCc
Confidence 46677777787789999999999987665577876 688 4799999999866543
No 38
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.02 E-value=0.036 Score=52.06 Aligned_cols=47 Identities=19% Similarity=0.305 Sum_probs=37.0
Q ss_pred hccceeeCceeeeEEEcCC----CcEEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 67 LGSKVKLSWKLSGVKKLDS----GEYSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 67 l~~~i~~~~~V~~I~~~~~----~~~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
.+.+|+++++|++|+.+++ + +.+++.+.+|+.+++||.||.|.-...
T Consensus 133 ~gv~i~~~~~v~~i~~~~~~~~~~-v~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 133 HGGAIRFGTRLLSFRQHDDDAGAG-VTARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp TTCEEESSCEEEEEEEECGGGCSE-EEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred CCCEEEeCCEEEEEEECCCCcccc-EEEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 3568999999999999887 6 777775444445799999999987743
No 39
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=96.88 E-value=0.0011 Score=59.65 Aligned_cols=45 Identities=22% Similarity=0.325 Sum_probs=37.5
Q ss_pred ceeeeccchhhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEE
Q 021616 47 QTVGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTY 92 (310)
Q Consensus 47 ~~~~~~~gG~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~ 92 (310)
...+.+.|||++|+++|++.++.+|++|++|++|..+++| +.+..
T Consensus 310 ~~~~~i~GG~~~l~~~l~~~l~~~i~l~~~V~~I~~~~~g-v~v~~ 354 (376)
T 2e1m_A 310 ATYWEIEGGSRMLPETLAKDLRDQIVMGQRMVRLEYYDPG-RDGHH 354 (376)
T ss_dssp CCEEEETTCTTHHHHHHHHHGGGTEECSEEEEEEEECCCC------
T ss_pred CceEEECCcHHHHHHHHHHhcCCcEEecCeEEEEEECCCc-eEEEe
Confidence 4579999999999999999998899999999999999887 55543
No 40
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=96.63 E-value=0.055 Score=47.97 Aligned_cols=50 Identities=16% Similarity=0.139 Sum_probs=33.7
Q ss_pred HHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 64 SKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 64 ~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
+...+.+++++++|+.+...++....+.....++..++++|.||-|.-..
T Consensus 112 a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~ 161 (397)
T 3oz2_A 112 AAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp HHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred HHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCccc
Confidence 33445689999999999988775223333222222468999999997654
No 41
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=96.61 E-value=0.062 Score=48.84 Aligned_cols=63 Identities=10% Similarity=0.007 Sum_probs=46.3
Q ss_pred eeeeccc-h---hhHHHHHHHHHh---ccceeeCc---eeeeEEEcCCCcEE-EEEECCCCeEEEecCEEEEcCCchH
Q 021616 48 TVGSFRK-G---LTMLPEAISKRL---GSKVKLSW---KLSGVKKLDSGEYS-LTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 48 ~~~~~~g-G---~~~L~~~L~~~l---~~~i~~~~---~V~~I~~~~~~~~~-v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
.++...+ | ...+++.|.+.+ +.+|++++ +|++|...+++ +. |.+ .+| +++.||.||+|+-...
T Consensus 148 g~~~~~~~g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~-v~gV~t--~~G-~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 148 GYFARSGAGWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENND-VKGAVT--ADG-KIWRAERTFLCAGASA 221 (438)
T ss_dssp EEEESSSCEEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTE-EEEEEE--TTT-EEEECSEEEECCGGGG
T ss_pred EEEeCCCCEEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCe-EEEEEE--CCC-CEEECCEEEECCCCCh
Confidence 3444444 4 355666666554 56899999 99999988774 65 665 677 4799999999998864
No 42
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=96.56 E-value=0.053 Score=51.46 Aligned_cols=47 Identities=15% Similarity=0.184 Sum_probs=37.9
Q ss_pred hccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 67 LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 67 l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
.+.+|+.+++|++|+.++++ +.|++.+.+|+++++||.||.|.-...
T Consensus 161 ~gv~i~~~~~v~~l~~~~~~-v~v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 161 AGAEIPRGHEVTRLRQDAEA-VEVTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp HTEECCBSCEEEECCBCSSC-EEEEEEETTEEEEEEESEEEECSCSSC
T ss_pred CCCEEEeCCEEEEEEEcCCe-EEEEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 45689999999999998886 888875466645799999999987643
No 43
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=96.43 E-value=0.27 Score=45.68 Aligned_cols=47 Identities=19% Similarity=0.285 Sum_probs=37.4
Q ss_pred hccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 67 LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 67 l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
.+.+|+++++|++|+.++++ +.|++.+.+|++++++|.||.|.-...
T Consensus 119 ~gv~v~~~~~v~~i~~~~~~-v~v~~~~~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 119 LGADIRRGHEVLSLTDDGAG-VTVEVRGPEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp TTCEEEETCEEEEEEEETTE-EEEEEEETTEEEEEEESEEEECCCTTC
T ss_pred CCCEEECCcEEEEEEEcCCe-EEEEEEcCCCCEEEEeCEEEECCCcch
Confidence 45689999999999998886 888875444444789999999977754
No 44
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=96.36 E-value=0.13 Score=46.36 Aligned_cols=46 Identities=15% Similarity=0.138 Sum_probs=36.4
Q ss_pred hccceeeCceeeeEEEcCCCcEEEEEECCCCeE-EEecCEEEEcCCch
Q 021616 67 LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLV-SLRSRSVVMTVPSY 113 (310)
Q Consensus 67 l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~-~~~ad~VI~a~p~~ 113 (310)
.+.+|+.+++|++|+..+++ +.+.+.+.+|+. ++.||.||.|+-..
T Consensus 119 ~gv~i~~~~~v~~i~~~~~~-~~v~v~~~~g~~~~~~a~~vV~A~G~~ 165 (421)
T 3nix_A 119 QGVDVEYEVGVTDIKFFGTD-SVTTIEDINGNKREIEARFIIDASGYG 165 (421)
T ss_dssp HTCEEECSEEEEEEEEETTE-EEEEEEETTSCEEEEEEEEEEECCGGG
T ss_pred CCCEEEcCCEEEEEEEeCCE-EEEEEEcCCCCEEEEEcCEEEECCCCc
Confidence 36799999999999998775 666665577732 68999999998764
No 45
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=96.36 E-value=0.37 Score=43.20 Aligned_cols=53 Identities=13% Similarity=0.214 Sum_probs=42.0
Q ss_pred hHHHHHHHHHhc-cceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 57 TMLPEAISKRLG-SKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 57 ~~L~~~L~~~l~-~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
..|.+.|.+.+. .+|+++++|++|+.++++ +.|++ .+| +++.+|.||.|.-..
T Consensus 127 ~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~~--~~g-~~~~a~~vV~AdG~~ 180 (407)
T 3rp8_A 127 AELQREMLDYWGRDSVQFGKRVTRCEEDADG-VTVWF--TDG-SSASGDLLIAADGSH 180 (407)
T ss_dssp HHHHHHHHHHHCGGGEEESCCEEEEEEETTE-EEEEE--TTS-CEEEESEEEECCCTT
T ss_pred HHHHHHHHHhCCcCEEEECCEEEEEEecCCc-EEEEE--cCC-CEEeeCEEEECCCcC
Confidence 346666766664 489999999999999886 88876 677 479999999997664
No 46
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=96.07 E-value=0.9 Score=42.11 Aligned_cols=48 Identities=19% Similarity=0.166 Sum_probs=38.2
Q ss_pred HhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 66 RLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 66 ~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
..+.+|+++++|++|+.++++ +.|++.+.+|+++++||.||.|.-...
T Consensus 119 ~~gv~v~~~~~v~~i~~~~~~-v~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 119 GRGAELLRGHTVRALTDEGDH-VVVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp HTTCEEEESCEEEEEEECSSC-EEEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred hCCCEEEcCCEEEEEEEeCCE-EEEEEEcCCCcEEEEeCEEEEccCccc
Confidence 345689999999999998886 888875444545789999999977754
No 47
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=96.07 E-value=0.019 Score=51.20 Aligned_cols=191 Identities=15% Similarity=0.124 Sum_probs=100.5
Q ss_pred hHHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchH--HHhccCCCCHHHHhhcc
Q 021616 57 TMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV--ASSLLRPLSVDAAGALS 131 (310)
Q Consensus 57 ~~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~--~~~ll~~~~~~~~~~l~ 131 (310)
..+.+.|.+.+ +.+|+++++|++|..++++ |.|.+ .+| ++.||.||+|+.... +...+..
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~-~~v~~--~~g--~~~a~~vV~A~G~~s~~l~~~~~~---------- 228 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEA-LFIKT--PSG--DVWANHVVVASGVWSGMFFKQLGL---------- 228 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSSSS-EEEEE--TTE--EEEEEEEEECCGGGTHHHHHHTTC----------
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCE-EEEEc--CCc--eEEcCEEEECCChhHHHHHHhcCC----------
Confidence 45667676654 4589999999999988775 76664 555 689999999998743 2222211
Q ss_pred CCCCCCEEEEEEEecCCccccccccCCCcCcceEEecCCCCCceeEEEeccCCCCCCCCCCcEEEEEEecCCCC-CCCCC
Q 021616 132 QFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGATN-LGILS 210 (310)
Q Consensus 132 ~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~p~~~p~g~~~l~~~~~g~~~-~~~~~ 210 (310)
.++..++....+.++.+.. ... ..++.. ...++ |. ++|.. .+|+... .....
T Consensus 229 ~~~~~~~~g~~~~~~~~~~--------~~~--~~~~~~------~~~~~-----p~--~~g~~----~vG~~~~~~~~~~ 281 (382)
T 1ryi_A 229 NNAFLPVKGECLSVWNDDI--------PLT--KTLYHD------HCYIV-----PR--KSGRL----VVGATMKPGDWSE 281 (382)
T ss_dssp CCCCEEEEEEEEEEECCSS--------CCC--SEEEET------TEEEE-----EC--TTSEE----EEECCCEETCCCC
T ss_pred CCceeccceEEEEECCCCC--------Ccc--ceEEcC------CEEEE-----Ec--CCCeE----EEeecccccCCCC
Confidence 1222233333334432210 000 011110 01111 11 12322 2232211 11222
Q ss_pred CCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCChHHHHHHHHHHhhh-cCCCCeEEeecccCCCchhHH
Q 021616 211 KKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRD-NGYQGLFLGGNYVAGVALGRC 289 (310)
Q Consensus 211 ~~~eel~~~~~~~l~~~~~~~~~~~p~~~~~~rw~~a~p~~~~g~~~~~~~~~~~~~~-~~~~~l~~aG~~~~g~gv~~a 289 (310)
..+++..+..++.+.+++|... ... ....|....|. +++.. ..+.. +..+|+|+++.+ .|.|+..|
T Consensus 282 ~~~~~~~~~l~~~~~~~~p~l~--~~~--~~~~w~g~~~~-t~d~~-------p~ig~~~~~~~l~~~~G~-~g~G~~~a 348 (382)
T 1ryi_A 282 TPDLGGLESVMKKAKTMLPAIQ--NMK--VDRFWAGLRPG-TKDGK-------PYIGRHPEDSRILFAAGH-FRNGILLA 348 (382)
T ss_dssp SCCHHHHHHHHHHHHHHCGGGG--GSE--EEEEEEEEEEE-CSSSC-------CEEEEETTEEEEEEEECC-SSCTTTTH
T ss_pred CCCHHHHHHHHHHHHHhCCCcC--CCc--eeeEEEEeccc-CCCCC-------cEeccCCCcCCEEEEEcC-CcchHHHh
Confidence 3456677888889999987542 111 13344332221 22211 01110 013689988764 57788999
Q ss_pred HHHHHHHHHHHHH
Q 021616 290 VESAYEVASEVSN 302 (310)
Q Consensus 290 i~sG~~aA~~i~~ 302 (310)
..+|+.+|+.|..
T Consensus 349 ~~~g~~la~~i~~ 361 (382)
T 1ryi_A 349 PATGALISDLIMN 361 (382)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999865
No 48
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=95.90 E-value=0.53 Score=42.95 Aligned_cols=56 Identities=11% Similarity=-0.075 Sum_probs=39.5
Q ss_pred HHHHHHHHHh---ccceeeCceeeeEEEcCCCcEE-EEEECC-CCe-EEEecCEEEEcCCchH
Q 021616 58 MLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYS-LTYETP-EGL-VSLRSRSVVMTVPSYV 114 (310)
Q Consensus 58 ~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~-v~~~~~-~g~-~~~~ad~VI~a~p~~~ 114 (310)
.+.+.|.+.+ +.+|+++++|++|..++++ +. |++.+. +|+ .++.||.||.|+-...
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~-v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGY-VKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEETTE-EEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEECCE-EEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 3555555443 4589999999999987764 43 655433 563 3789999999987754
No 49
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=94.83 E-value=1.9 Score=37.94 Aligned_cols=54 Identities=15% Similarity=0.150 Sum_probs=37.9
Q ss_pred HHHHHHHH---hccceeeCceeeeEEEcCCCcEE-EEEECCCCeEEEecCEEEEcCCch
Q 021616 59 LPEAISKR---LGSKVKLSWKLSGVKKLDSGEYS-LTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 59 L~~~L~~~---l~~~i~~~~~V~~I~~~~~~~~~-v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
|.+.|.+. .+.+|+.+++|++|..++++ +. |++.+.++..+++||.||.|+-..
T Consensus 104 l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~-v~gv~~~~~~~~~~~~a~~vV~A~G~~ 161 (397)
T 3cgv_A 104 FDKHLAALAAKAGADVWVKSPALGVIKENGK-VAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp HHHHHHHHHHHHTCEEESSCCEEEEEEETTE-EEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHhCCCEEEECCEEEEEEEeCCE-EEEEEEEECCeEEEEEcCEEEECCCcc
Confidence 44444433 35689999999999988774 65 666433223579999999998654
No 50
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=93.67 E-value=4.8 Score=38.00 Aligned_cols=34 Identities=21% Similarity=0.078 Sum_probs=29.2
Q ss_pred CCeEEeecccC------CCchhHHHHHHHHHHHHHHHHhh
Q 021616 272 QGLFLGGNYVA------GVALGRCVESAYEVASEVSNFLS 305 (310)
Q Consensus 272 ~~l~~aG~~~~------g~gv~~ai~sG~~aA~~i~~~l~ 305 (310)
+|+.++||..+ |-|++-|+.+|..+|+.|.+.+.
T Consensus 347 ~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~ 386 (584)
T 2gmh_A 347 PGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLT 386 (584)
T ss_dssp TTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHH
Confidence 78999999743 67899999999999999987663
No 51
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=93.67 E-value=5.1 Score=38.26 Aligned_cols=50 Identities=16% Similarity=0.137 Sum_probs=35.8
Q ss_pred ceeeCceeeeEEEcCC---CcEEEEEEC----CCC-eEEEecCEEEEcCCchH-HHhcc
Q 021616 70 KVKLSWKLSGVKKLDS---GEYSLTYET----PEG-LVSLRSRSVVMTVPSYV-ASSLL 119 (310)
Q Consensus 70 ~i~~~~~V~~I~~~~~---~~~~v~~~~----~~g-~~~~~ad~VI~a~p~~~-~~~ll 119 (310)
+|+++++|++|+.+++ ..+.|++.+ .+| .++++||+||.|.-... ..+.+
T Consensus 159 ~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~l 217 (639)
T 2dkh_A 159 EPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAI 217 (639)
T ss_dssp CCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHT
T ss_pred EEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHh
Confidence 8999999999998763 137777653 244 24789999999987744 33444
No 52
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=93.35 E-value=0.091 Score=46.44 Aligned_cols=61 Identities=11% Similarity=0.196 Sum_probs=45.6
Q ss_pred eeeccch---hhHHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 49 VGSFRKG---LTMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 49 ~~~~~gG---~~~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
++...+| ...++..|.+.+ +.+|+++++|++|..++++ |.|++ .+| ++.||+||+|+-...
T Consensus 143 ~~~~~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~-~~V~t--~~g--~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 143 TYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGA-WEVRC--DAG--SYRAAVLVNAAGAWC 209 (381)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTE-EEEEC--SSE--EEEESEEEECCGGGH
T ss_pred EEcCCCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCe-EEEEe--CCC--EEEcCEEEECCChhH
Confidence 4455455 256777776654 5689999999999998875 77764 566 689999999998754
No 53
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=92.88 E-value=0.21 Score=43.77 Aligned_cols=57 Identities=14% Similarity=0.139 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEECCCCe-EEEecCEEEEcCCchH
Q 021616 56 LTMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPSYV 114 (310)
Q Consensus 56 ~~~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~-~~~~ad~VI~a~p~~~ 114 (310)
...+.+.|.+.+ +.+|+++++|++|..++++.+.|.+ .+|+ .++.||.||+|+-...
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~--~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDF--GGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEE--CTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEE--CCCceeEEEeCEEEECCCcch
Confidence 345677776654 4689999999999998765477765 4552 4789999999998753
No 54
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=92.73 E-value=0.19 Score=48.67 Aligned_cols=62 Identities=18% Similarity=0.269 Sum_probs=45.9
Q ss_pred eeeccchh---hHHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 49 VGSFRKGL---TMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 49 ~~~~~gG~---~~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
++...+|. ..++++|.+.+ +.+|+++++|++|..++++ |.|.+ .+|..++.||.||+|+-..
T Consensus 401 ~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v~V~t--~~G~~~i~Ad~VVlAtG~~ 468 (689)
T 3pvc_A 401 IHYPAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ-WQLTF--GQSQAAKHHATVILATGHR 468 (689)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS-EEEEE--C-CCCCEEESEEEECCGGG
T ss_pred EEecCCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe-EEEEe--CCCcEEEECCEEEECCCcc
Confidence 44454553 56777777654 4689999999999999886 87775 5662168999999999886
No 55
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=92.67 E-value=0.2 Score=48.44 Aligned_cols=61 Identities=13% Similarity=0.205 Sum_probs=45.8
Q ss_pred eeeccchh---hHHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 49 VGSFRKGL---TMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 49 ~~~~~gG~---~~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
++...+|. ..+++.|.+.+ +.+|+++++|++|..++++ |.|.+ .+|. ++.||.||+|+-..
T Consensus 406 ~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v~V~t--~~G~-~i~Ad~VVlAtG~~ 472 (676)
T 3ps9_A 406 ITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDC-WLLNF--AGDQ-QATHSVVVLANGHQ 472 (676)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTE-EEEEE--TTSC-EEEESEEEECCGGG
T ss_pred EEecCCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCe-EEEEE--CCCC-EEECCEEEECCCcc
Confidence 44444442 56777776654 4689999999999998885 87775 5663 69999999999876
No 56
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=92.11 E-value=0.34 Score=43.94 Aligned_cols=57 Identities=16% Similarity=0.306 Sum_probs=44.3
Q ss_pred cchhhHHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 53 RKGLTMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 53 ~gG~~~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
......+.+.|.+.+ +.+|+++++|++|...+++ +.|.+ .+| ++.||.||+|+-...
T Consensus 128 ~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~-~~V~~--~~g--~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 128 DHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG-FRVTT--SAG--TVDAASLVVASGGKS 187 (417)
T ss_dssp SSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE-EEEEE--TTE--EEEESEEEECCCCSS
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE-EEEEE--CCc--EEEeeEEEECCCCcc
Confidence 344557777777665 4589999999999988875 87775 566 689999999987753
No 57
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=91.65 E-value=0.35 Score=44.12 Aligned_cols=57 Identities=18% Similarity=0.244 Sum_probs=41.9
Q ss_pred hhhHHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 55 GLTMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 55 G~~~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
.-..+.+.|.+.+ +.+|+++++|++|..++++.+.|.+ .+| +++.||.||+|+-...
T Consensus 132 ~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~--~~G-~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 132 KAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVIL--QTG-EVLETNHVVIAVGGKS 191 (447)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE--TTC-CEEECSCEEECCCCSS
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEE--CCC-CEEECCEEEECCCCCc
Confidence 3456777776655 4589999999999987653366665 567 3699999999986644
No 58
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=91.54 E-value=0.46 Score=42.78 Aligned_cols=55 Identities=9% Similarity=0.136 Sum_probs=39.4
Q ss_pred hhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 56 LTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 56 ~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
+........+..+.+|++++.|++|...+++...|.+ .+| +++.+|.||+++...
T Consensus 196 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l--~dG-~~i~aD~Vv~a~G~~ 250 (415)
T 3lxd_A 196 LSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRM--QDG-SVIPADIVIVGIGIV 250 (415)
T ss_dssp HHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEE--SSS-CEEECSEEEECSCCE
T ss_pred HHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEe--CCC-CEEEcCEEEECCCCc
Confidence 4444444444556799999999999987664225665 577 479999999998753
No 59
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=91.37 E-value=0.44 Score=42.58 Aligned_cols=55 Identities=11% Similarity=0.137 Sum_probs=44.0
Q ss_pred hhHHHHHHHHHhc-cceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 56 LTMLPEAISKRLG-SKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 56 ~~~L~~~L~~~l~-~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
...|.+.|.+.+. .+|+++++|++|+.++++ +.|++ .+| +++.+|.||.|.-...
T Consensus 98 ~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~~--~~g-~~~~ad~vV~AdG~~S 153 (397)
T 2vou_A 98 YDSIYGGLYELFGPERYHTSKCLVGLSQDSET-VQMRF--SDG-TKAEANWVIGADGGAS 153 (397)
T ss_dssp HHHHHHHHHHHHCSTTEETTCCEEEEEECSSC-EEEEE--TTS-CEEEESEEEECCCTTC
T ss_pred HHHHHHHHHHhCCCcEEEcCCEEEEEEecCCE-EEEEE--CCC-CEEECCEEEECCCcch
Confidence 3567777777764 589999999999998886 88876 567 4799999999977643
No 60
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=91.36 E-value=0.36 Score=42.51 Aligned_cols=57 Identities=12% Similarity=0.313 Sum_probs=42.5
Q ss_pred HHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchHHHhccC
Q 021616 58 MLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLR 120 (310)
Q Consensus 58 ~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~ 120 (310)
.+++.|.+.+ +.+|+.+++|++|+.++++ +.|.+ .+| ++.||.||+|+-... ..+++
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~-~~v~~--~~g--~~~a~~vV~a~G~~s-~~l~~ 209 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG-VTIET--ADG--EYQAKKAIVCAGTWV-KDLLP 209 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-EEEEE--SSC--EEEEEEEEECCGGGG-GGTST
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE-EEEEE--CCC--eEEcCEEEEcCCccH-Hhhcc
Confidence 5666666554 4589999999999998775 77764 566 489999999998763 34443
No 61
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=91.26 E-value=0.38 Score=43.00 Aligned_cols=53 Identities=17% Similarity=0.140 Sum_probs=41.9
Q ss_pred HHHHHHHHHhc-cceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 58 MLPEAISKRLG-SKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 58 ~L~~~L~~~l~-~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
.|.+.|.+.+. .+|+++++|++|+.++++ |.|++ .+| ++++||.||.|.-...
T Consensus 129 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~~--~~g-~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 129 DLRAILLNSLENDTVIWDRKLVMLEPGKKK-WTLTF--ENK-PSETADLVILANGGMS 182 (398)
T ss_dssp HHHHHHHHTSCTTSEEESCCEEEEEECSSS-EEEEE--TTS-CCEEESEEEECSCTTC
T ss_pred HHHHHHHhhcCCCEEEECCEEEEEEECCCE-EEEEE--CCC-cEEecCEEEECCCcch
Confidence 46667776664 379999999999998876 88886 567 4789999999987643
No 62
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=91.22 E-value=0.37 Score=42.64 Aligned_cols=53 Identities=11% Similarity=0.149 Sum_probs=41.3
Q ss_pred hHHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 57 TMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 57 ~~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
..+.+.|.+.+ +.+|+++++|++|+.++++ +.|.+ .+| ++.||.||+|+-...
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-~~v~~--~~g--~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDISPDS-VKIET--ANG--SYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC-EEEEE--TTE--EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe-EEEEe--CCC--EEEeCEEEEecCccH
Confidence 45666666654 4589999999999998775 77764 455 689999999998753
No 63
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=91.16 E-value=0.38 Score=42.90 Aligned_cols=52 Identities=19% Similarity=0.238 Sum_probs=39.3
Q ss_pred hHHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 57 TMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 57 ~~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
..+...|.+.+ +.+|+++++|++|+.++++ |.|.. .+| ++.||.||+|+-..
T Consensus 153 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~-v~v~t--~~g--~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 153 RGTLAALFTLAQAAGATLRAGETVTELVPDADG-VSVTT--DRG--TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTE-EEEEE--SSC--EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCe-EEEEE--CCC--EEEcCEEEEcCCcC
Confidence 34556665543 4689999999999988775 77654 455 68999999999775
No 64
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=90.98 E-value=0.4 Score=43.72 Aligned_cols=55 Identities=20% Similarity=0.192 Sum_probs=38.7
Q ss_pred HHHHHHHHH---hccceeeCceeeeEEEcCCCcEEEEEEC-CCCe--EEEecCEEEEcCCch
Q 021616 58 MLPEAISKR---LGSKVKLSWKLSGVKKLDSGEYSLTYET-PEGL--VSLRSRSVVMTVPSY 113 (310)
Q Consensus 58 ~L~~~L~~~---l~~~i~~~~~V~~I~~~~~~~~~v~~~~-~~g~--~~~~ad~VI~a~p~~ 113 (310)
.+.+.|.+. ++..|+++++|++|+..+++ |.|++.+ .+|+ .++.||+||+|+-..
T Consensus 116 ~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~-~~V~~~~~~~G~~~~~~~~d~VVvAtG~~ 176 (447)
T 2gv8_A 116 TIQEYQRIYAQPLLPFIKLATDVLDIEKKDGS-WVVTYKGTKAGSPISKDIFDAVSICNGHY 176 (447)
T ss_dssp HHHHHHHHHHGGGGGGEECSEEEEEEEEETTE-EEEEEEESSTTCCEEEEEESEEEECCCSS
T ss_pred HHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCe-EEEEEeecCCCCeeEEEEeCEEEECCCCC
Confidence 344444433 34479999999999988775 8888743 2252 268999999998763
No 65
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=90.97 E-value=0.65 Score=42.62 Aligned_cols=46 Identities=17% Similarity=0.252 Sum_probs=36.0
Q ss_pred hccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 67 LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 67 l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
.+.+++++++|++|+.++++ +.+.+.+.+|.+++.+|.||+++...
T Consensus 234 ~Gv~v~~~~~v~~i~~~~~~-~~v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 234 QGLKILLGARVTGTEVKNKQ-VTVKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp TTEEEEETCEEEEEEECSSC-EEEEEESSSEEEEEEESEEEECSCEE
T ss_pred CCCEEEECCEEEEEEEcCCE-EEEEEEeCCCcEEEECCEEEEeeCCc
Confidence 34589999999999988775 77777544443578999999998764
No 66
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=90.73 E-value=0.52 Score=42.28 Aligned_cols=54 Identities=11% Similarity=0.102 Sum_probs=38.0
Q ss_pred hHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 57 TMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 57 ~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
........+..+.+++++++|++|..++++...|.+ .+| +++.+|.||+++...
T Consensus 187 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~--~dG-~~i~aD~Vv~a~G~~ 240 (404)
T 3fg2_P 187 SSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVL--SDG-NTLPCDLVVVGVGVI 240 (404)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE--TTS-CEEECSEEEECCCEE
T ss_pred HHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEe--CCC-CEEEcCEEEECcCCc
Confidence 333333334445689999999999987654234655 677 479999999998763
No 67
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=90.71 E-value=0.43 Score=42.55 Aligned_cols=59 Identities=15% Similarity=0.173 Sum_probs=43.7
Q ss_pred hHHHHHHHHHh----ccceeeCceeeeEEEcCCCcE--EEEEECCCCeEEEecCEEEEcCCchH-HHhcc
Q 021616 57 TMLPEAISKRL----GSKVKLSWKLSGVKKLDSGEY--SLTYETPEGLVSLRSRSVVMTVPSYV-ASSLL 119 (310)
Q Consensus 57 ~~L~~~L~~~l----~~~i~~~~~V~~I~~~~~~~~--~v~~~~~~g~~~~~ad~VI~a~p~~~-~~~ll 119 (310)
..|.+.|.+.+ +.+|+++++|++|+.++++ + .|++ .+|+ ++++|.||.|+-... +.+.+
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~g~v~~--~~g~-~~~ad~vV~AdG~~s~vr~~l 172 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-AIDQVRL--NDGR-VLRPRVVVGADGIASYVRRRL 172 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-CEEEEEE--TTSC-EEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-eEEEEEE--CCCC-EEECCEEEECCCCChHHHHHh
Confidence 35666666665 3479999999999998886 7 7776 5674 799999999987744 33444
No 68
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=90.66 E-value=0.12 Score=45.08 Aligned_cols=37 Identities=22% Similarity=0.411 Sum_probs=29.5
Q ss_pred CCCCeEEeecccC--------CCchhHHHHHHHHHHHHHHHHhhh
Q 021616 270 GYQGLFLGGNYVA--------GVALGRCVESAYEVASEVSNFLSQ 306 (310)
Q Consensus 270 ~~~~l~~aG~~~~--------g~gv~~ai~sG~~aA~~i~~~l~~ 306 (310)
..|+||.|||... |+...+++.||+.||+.|++.|++
T Consensus 282 ~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~laa 326 (326)
T 3fpz_A 282 GVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFAA 326 (326)
T ss_dssp TSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhcC
Confidence 4689999999631 344567799999999999999874
No 69
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=90.58 E-value=0.57 Score=43.39 Aligned_cols=54 Identities=17% Similarity=0.246 Sum_probs=39.0
Q ss_pred hhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 56 LTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 56 ~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
+........+..+.+|+++++|++|+.++++ +.|.. .+| +++.+|.||+++...
T Consensus 225 ~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~-v~v~~--~~g-~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 225 AALVLEESFAERGVRLFKNARAASVTRTGAG-VLVTM--TDG-RTVEGSHALMTIGSV 278 (499)
T ss_dssp HHHHHHHHHHHTTCEEETTCCEEEEEECSSS-EEEEE--TTS-CEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEeCCE-EEEEE--CCC-cEEEcCEEEECCCCC
Confidence 4444433334445689999999999987765 76664 566 479999999998654
No 70
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=90.56 E-value=0.48 Score=44.08 Aligned_cols=60 Identities=20% Similarity=0.323 Sum_probs=40.5
Q ss_pred hhhHHHHHHHHHh---ccceeeCceeeeEEEcCCCcE-EEEEECCCCeEEEecC-EEEEcCCchH
Q 021616 55 GLTMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEY-SLTYETPEGLVSLRSR-SVVMTVPSYV 114 (310)
Q Consensus 55 G~~~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~-~v~~~~~~g~~~~~ad-~VI~a~p~~~ 114 (310)
|...|.+.|.+.+ +.+|+++++|++|..++++++ .|.+.+.++..++.|| .||+|+-...
T Consensus 200 g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 200 GGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp TTHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred CHHHHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 3336777776654 458999999999998843333 3555333333468996 9999987643
No 71
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=90.49 E-value=0.65 Score=42.79 Aligned_cols=44 Identities=14% Similarity=0.252 Sum_probs=35.7
Q ss_pred HhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 66 RLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 66 ~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
..+.+++++++|++|+..+++ +.|.+ .+| +++.+|.||+++...
T Consensus 244 ~~Gv~i~~~~~V~~i~~~~~~-v~v~~--~~g-~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 244 AKGISIIYEATVSQVQSTENC-YNVVL--TNG-QTICADRVMLATGRV 287 (484)
T ss_dssp HHTCEEESSCCEEEEEECSSS-EEEEE--TTS-CEEEESEEEECCCEE
T ss_pred HCCCEEEeCCEEEEEEeeCCE-EEEEE--CCC-cEEEcCEEEEeeCCC
Confidence 345689999999999988775 77776 577 479999999998763
No 72
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=90.46 E-value=0.49 Score=36.96 Aligned_cols=50 Identities=14% Similarity=0.302 Sum_probs=37.4
Q ss_pred HHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 58 MLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 58 ~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
.+.+.+.+.+ +.+++++ +|++|+.++++ +.|++ .+| ++.+|.||+|+-..
T Consensus 57 ~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~-~~v~~--~~g--~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 57 ELLRRLEAHARRYGAEVRPG-VVKGVRDMGGV-FEVET--EEG--VEKAERLLLCTHKD 109 (180)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CCCEEEECSSS-EEEEC--SSC--EEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCE-EEEEE--CCC--EEEECEEEECCCCC
Confidence 4555555444 4589999 99999988775 77764 566 68999999998763
No 73
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=90.45 E-value=0.47 Score=42.19 Aligned_cols=63 Identities=13% Similarity=0.189 Sum_probs=44.7
Q ss_pred eeeeccchhh---HHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 48 TVGSFRKGLT---MLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 48 ~~~~~~gG~~---~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
.++...+|.- .+.+.|.+.+ +.+|+++++|++|..++++.+.|.+ .+| ++.+|.||+|+-...
T Consensus 162 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~--~~g--~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 162 ATWQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKT--TRG--TIHAGKVALAGAGHS 230 (405)
T ss_dssp EEEETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEE--TTC--CEEEEEEEECCGGGH
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEe--CCc--eEECCEEEECCchhH
Confidence 3455555533 5666666554 4589999999999988664355654 566 589999999998753
No 74
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=90.35 E-value=0.38 Score=41.74 Aligned_cols=54 Identities=7% Similarity=0.089 Sum_probs=40.3
Q ss_pred hhHHHHHHHHHhccceeeCceeeeEEEcCCCcEE-EEEECCCCeEEEecCEEEEcCCchH
Q 021616 56 LTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYS-LTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 56 ~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~-v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
+......+++..+.+++++++|++|+..+++ |. |++ .+| ++.||+||+|+-...
T Consensus 78 ~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~-~~~v~~--~~g--~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 78 VLAYLAQYEQKYALPVLRPIRVQRVSHFGER-LRVVAR--DGR--QWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHHHHHHTTCCEECSCCEEEEEEETTE-EEEEET--TSC--EEEEEEEEECCCSGG
T ss_pred HHHHHHHHHHHcCCEEEcCCEEEEEEECCCc-EEEEEe--CCC--EEEeCEEEECCCCCC
Confidence 4444444445556689999999999998874 77 763 566 689999999998643
No 75
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=90.23 E-value=0.56 Score=41.43 Aligned_cols=53 Identities=13% Similarity=0.157 Sum_probs=40.3
Q ss_pred hHHHHHHHHHh---ccceeeCceeeeEEEcCCCcEE-EEEECCCCeEEEecCEEEEcCCchH
Q 021616 57 TMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYS-LTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 57 ~~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~-v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
..+.+.|.+.+ +.+|+++++|++|+.++++ +. |.+ .+| ++.||.||+|+-...
T Consensus 149 ~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-v~gv~~--~~g--~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 149 FEATTAFAVKAKEYGAKLLEYTEVKGFLIENNE-IKGVKT--NKG--IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSB-EEEEEE--TTE--EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEECCceEEEEEEECCE-EEEEEE--CCc--EEECCEEEECcchhH
Confidence 45666665554 4689999999999988775 66 664 566 689999999998753
No 76
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=89.90 E-value=0.65 Score=42.58 Aligned_cols=53 Identities=9% Similarity=0.050 Sum_probs=38.1
Q ss_pred hhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 56 LTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 56 ~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
+........+..+.+++++++|++|+..+++ +.|.+ .+| +++.+|.||+|+..
T Consensus 204 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-v~v~~--~~g-~~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 204 LSQMLRHDLEKNDVVVHTGEKVVRLEGENGK-VARVI--TDK-RTLDADLVILAAGV 256 (472)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEESSSB-EEEEE--ESS-CEEECSEEEECSCE
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEccCCe-EEEEE--eCC-CEEEcCEEEECCCC
Confidence 3333333334445689999999999986664 76766 466 47999999999876
No 77
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=89.75 E-value=0.62 Score=40.84 Aligned_cols=49 Identities=6% Similarity=0.160 Sum_probs=37.5
Q ss_pred HHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 61 EAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 61 ~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
..+++..+.+++++++|++|+..+++ |.|.. .+| ++.||+||+|+-...
T Consensus 95 ~~~~~~~gv~i~~~~~v~~i~~~~~~-~~v~~--~~g--~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 95 QVVANHYELNIFENTVVTNISADDAY-YTIAT--TTE--TYHADYIFVATGDYN 143 (369)
T ss_dssp HHHHHHTTCEEECSCCEEEEEECSSS-EEEEE--SSC--CEEEEEEEECCCSTT
T ss_pred HHHHHHcCCeEEeCCEEEEEEECCCe-EEEEe--CCC--EEEeCEEEECCCCCC
Confidence 33444455689999999999998775 88875 455 589999999988753
No 78
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=89.71 E-value=0.59 Score=43.99 Aligned_cols=55 Identities=20% Similarity=0.352 Sum_probs=41.5
Q ss_pred hHHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 57 TMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 57 ~~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
..+.+.|.+.+ +.+|+++++|++|...+++.+.|++ .+| +++.||.||+|+-...
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l--~~G-~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTL--SNG-EEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEE--TTS-CEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEE--CCC-CEEECCEEEECCCCCh
Confidence 55666676554 4589999999999988775344665 577 4799999999987743
No 79
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=89.40 E-value=0.71 Score=41.06 Aligned_cols=43 Identities=26% Similarity=0.305 Sum_probs=34.5
Q ss_pred hccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 67 LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 67 l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
.+.+++++++|++|+.++++ +.|.+ .+| +++.+|.||+|+...
T Consensus 200 ~gv~i~~~~~v~~i~~~~~~-~~v~~--~~g-~~i~~d~vv~a~G~~ 242 (384)
T 2v3a_A 200 LGVRFHLGPVLASLKKAGEG-LEAHL--SDG-EVIPCDLVVSAVGLR 242 (384)
T ss_dssp TTCEEEESCCEEEEEEETTE-EEEEE--TTS-CEEEESEEEECSCEE
T ss_pred cCCEEEeCCEEEEEEecCCE-EEEEE--CCC-CEEECCEEEECcCCC
Confidence 34589999999999987764 77765 567 479999999998753
No 80
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=89.15 E-value=0.78 Score=41.24 Aligned_cols=54 Identities=17% Similarity=0.189 Sum_probs=38.2
Q ss_pred hhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 56 LTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 56 ~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
+........+..+.++++++.|++|+.++. ...|.+ .+| +++.+|.||+++...
T Consensus 187 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~v~~--~dg-~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 187 IGAWLRGLLTELGVQVELGTGVVGFSGEGQ-LEQVMA--SDG-RSFVADSALICVGAE 240 (410)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEECSSS-CCEEEE--TTS-CEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeccCc-EEEEEE--CCC-CEEEcCEEEEeeCCe
Confidence 333333333444568999999999987654 356766 577 479999999998764
No 81
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=89.04 E-value=0.99 Score=41.69 Aligned_cols=44 Identities=16% Similarity=0.208 Sum_probs=34.3
Q ss_pred hccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 67 LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 67 l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
.+.+|+++++|++|+..+++.+.|.+ .+| +++.+|.||+++...
T Consensus 244 ~GV~i~~~~~v~~i~~~~~~~~~v~~--~~G-~~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 244 NGINVRTHENPAKVTKNADGTRHVVF--ESG-AEADYDVVMLAIGRV 287 (490)
T ss_dssp TTEEEEETCCEEEEEECTTSCEEEEE--TTS-CEEEESEEEECSCEE
T ss_pred CCCEEEeCCEEEEEEEcCCCEEEEEE--CCC-cEEEcCEEEEccCCC
Confidence 34689999999999987654366665 577 479999999998653
No 82
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=88.91 E-value=1.1 Score=41.56 Aligned_cols=45 Identities=18% Similarity=0.220 Sum_probs=34.6
Q ss_pred HHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 65 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 65 ~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
+..+.+++++++|++|+..+++.+.|++ .+| +++++|.||+++..
T Consensus 246 ~~~GV~i~~~~~v~~i~~~~~~~~~v~~--~~G-~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 246 TANGIEIMTNENPAKVSLNTDGSKHVTF--ESG-KTLDVDVVMMAIGR 290 (495)
T ss_dssp HHTTCEEEESCCEEEEEECTTSCEEEEE--TTS-CEEEESEEEECSCE
T ss_pred HhCCCEEEeCCEEEEEEEcCCceEEEEE--CCC-cEEEcCEEEECCCC
Confidence 3345689999999999987653366665 577 47999999999865
No 83
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=88.84 E-value=0.8 Score=41.19 Aligned_cols=54 Identities=13% Similarity=0.270 Sum_probs=39.9
Q ss_pred hhHHHHHHHHHh---ccceeeCceeeeEEEc----CCCcEEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 56 LTMLPEAISKRL---GSKVKLSWKLSGVKKL----DSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 56 ~~~L~~~L~~~l---~~~i~~~~~V~~I~~~----~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
-..+.+.|.+.+ +.+|+++++|++|..+ +++ |.|.. .+| ++.||+||+|+-...
T Consensus 108 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~--~~g--~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 108 AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQV--NST--QWQCKNLIVATGGLS 168 (401)
T ss_dssp THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEE--TTE--EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEE--CCC--EEECCEEEECCCCcc
Confidence 455666666554 4689999999999987 554 77765 455 689999999985543
No 84
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=88.70 E-value=1.1 Score=40.76 Aligned_cols=45 Identities=16% Similarity=0.192 Sum_probs=34.5
Q ss_pred HHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 65 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 65 ~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
+..+.+++++++|++|+..+++.+.|++ .+| +++.+|.||+++..
T Consensus 219 ~~~Gv~i~~~~~v~~i~~~~~~~~~v~~--~~g-~~i~~D~vv~a~G~ 263 (450)
T 1ges_A 219 NAEGPQLHTNAIPKAVVKNTDGSLTLEL--EDG-RSETVDCLIWAIGR 263 (450)
T ss_dssp HHHSCEEECSCCEEEEEECTTSCEEEEE--TTS-CEEEESEEEECSCE
T ss_pred HHCCCEEEeCCEEEEEEEeCCcEEEEEE--CCC-cEEEcCEEEECCCC
Confidence 3345689999999999987654366665 577 47899999999855
No 85
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=88.57 E-value=17 Score=34.90 Aligned_cols=33 Identities=15% Similarity=0.407 Sum_probs=27.1
Q ss_pred CCeEEeecccC------CCchhHHHHHHHHHHHHHHHHh
Q 021616 272 QGLFLGGNYVA------GVALGRCVESAYEVASEVSNFL 304 (310)
Q Consensus 272 ~~l~~aG~~~~------g~gv~~ai~sG~~aA~~i~~~l 304 (310)
++++++||..| |-|++-+|..+...|..|...+
T Consensus 351 gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl 389 (665)
T 1pn0_A 351 ERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVL 389 (665)
T ss_dssp TTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHH
Confidence 68999999843 6789999999999988886644
No 86
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=88.16 E-value=0.98 Score=41.18 Aligned_cols=43 Identities=16% Similarity=0.237 Sum_probs=34.3
Q ss_pred hccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 67 LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 67 l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
.+.+++++++|++|+.++++ +.+.+ .+| +++.+|.||+|+...
T Consensus 221 ~Gv~i~~~~~V~~i~~~~~~-v~v~~--~~g-~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 221 QGLTIRTGVRVTAVVPEAKG-ARVEL--EGG-EVLEADRVLVAVGRR 263 (455)
T ss_dssp HTCEEECSCCEEEEEEETTE-EEEEE--TTS-CEEEESEEEECSCEE
T ss_pred CCCEEEECCEEEEEEEeCCE-EEEEE--CCC-eEEEcCEEEECcCCC
Confidence 35689999999999987774 77665 466 479999999998664
No 87
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=87.82 E-value=1 Score=41.11 Aligned_cols=46 Identities=13% Similarity=0.144 Sum_probs=34.6
Q ss_pred HHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 65 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 65 ~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
+..+.+|+++++|++|+.++++.+.|.. ..+| + +.+|.||+++...
T Consensus 222 ~~~Gv~i~~~~~v~~i~~~~~~~~~v~~-~~~g-~-i~aD~Vv~a~G~~ 267 (463)
T 4dna_A 222 EEKGIRILCEDIIQSVSADADGRRVATT-MKHG-E-IVADQVMLALGRM 267 (463)
T ss_dssp HHTTCEEECSCCEEEEEECTTSCEEEEE-SSSC-E-EEESEEEECSCEE
T ss_pred HHCCCEEECCCEEEEEEEcCCCEEEEEE-cCCC-e-EEeCEEEEeeCcc
Confidence 3345689999999999988665345551 3677 4 9999999998763
No 88
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=87.65 E-value=1.6 Score=39.87 Aligned_cols=48 Identities=21% Similarity=0.170 Sum_probs=34.5
Q ss_pred HHhccceeeCceeeeEEEcCCCcEEEEEECCCCe-EEEecCEEEEcCCch
Q 021616 65 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPSY 113 (310)
Q Consensus 65 ~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~-~~~~ad~VI~a~p~~ 113 (310)
+..+.+++++++|++|+.++++ +.+.+.+.+|+ +++.+|.||+++...
T Consensus 227 ~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~~~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 227 KNEKMKFMTSTKVVGGTNNGDS-VSLEVEGKNGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp HHTCCEEECSCEEEEEEECSSS-EEEEEECC---EEEEEESEEEECSCEE
T ss_pred hcCCcEEEeCCEEEEEEEcCCe-EEEEEEcCCCceEEEECCEEEECCCcc
Confidence 3445689999999999987765 77776432452 468999999998653
No 89
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=87.60 E-value=1 Score=42.27 Aligned_cols=54 Identities=20% Similarity=0.247 Sum_probs=40.0
Q ss_pred hhHHHHHHHHHhcc--ceeeCceeeeEEEcCC-CcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 56 LTMLPEAISKRLGS--KVKLSWKLSGVKKLDS-GEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 56 ~~~L~~~L~~~l~~--~i~~~~~V~~I~~~~~-~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
+....+..++..+. +|+++++|++++.+++ +.|.|++ .+| +++.||+||+|+-.
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~--~~G-~~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTT--DHG-EVYRAKYVVNAVGL 145 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEE--TTS-CEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEE--cCC-CEEEeCEEEECCcc
Confidence 44444555555543 7999999999998865 2478876 677 47899999999875
No 90
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=87.56 E-value=1.2 Score=41.86 Aligned_cols=57 Identities=7% Similarity=0.047 Sum_probs=39.6
Q ss_pred hHHHHHHHHHh---ccceeeCceeeeEEEcC-CCcEEEEEECCCCe-EEEecCEEEEcCCch
Q 021616 57 TMLPEAISKRL---GSKVKLSWKLSGVKKLD-SGEYSLTYETPEGL-VSLRSRSVVMTVPSY 113 (310)
Q Consensus 57 ~~L~~~L~~~l---~~~i~~~~~V~~I~~~~-~~~~~v~~~~~~g~-~~~~ad~VI~a~p~~ 113 (310)
..+.+.|.+.+ +.+|+++++|++|..++ +..+.|.+.+.+|+ .++.||.||+|+-..
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~ 316 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGF 316 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCc
Confidence 35666666554 45899999999999876 43233555433563 368999999998663
No 91
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=87.55 E-value=0.44 Score=43.48 Aligned_cols=57 Identities=5% Similarity=0.065 Sum_probs=36.5
Q ss_pred hhHHHHHHHHHhccceeeCceeeeEEEcC--CCcE--EEEEECCCCeE-EEecCEEEEcCCc
Q 021616 56 LTMLPEAISKRLGSKVKLSWKLSGVKKLD--SGEY--SLTYETPEGLV-SLRSRSVVMTVPS 112 (310)
Q Consensus 56 ~~~L~~~L~~~l~~~i~~~~~V~~I~~~~--~~~~--~v~~~~~~g~~-~~~ad~VI~a~p~ 112 (310)
+....+..++.++.+++++++|++|+..+ ++.| .|++.+.+|+. ++.||+||+|+-.
T Consensus 129 ~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 129 FNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 33444444455556899999999999872 2234 45443222322 6899999999875
No 92
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=87.54 E-value=1.1 Score=37.97 Aligned_cols=55 Identities=15% Similarity=0.041 Sum_probs=39.0
Q ss_pred HHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCe-EEEecCEEEEcCCc
Q 021616 58 MLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPS 112 (310)
Q Consensus 58 ~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~-~~~~ad~VI~a~p~ 112 (310)
.+.+.+.+..+.+++++++|.+|..++++...|.+...+|+ .++.+|.||+++..
T Consensus 187 ~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 187 STVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp HHHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCE
T ss_pred HHHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcC
Confidence 45555555556689999999999887754234655444663 36899999999875
No 93
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=87.52 E-value=1.3 Score=40.29 Aligned_cols=54 Identities=9% Similarity=0.100 Sum_probs=37.8
Q ss_pred hhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 56 LTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 56 ~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
+........+..+.+|+++++|++|+..+++ +.|.+ ++| ++.+|.||+++....
T Consensus 191 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-v~v~~--~~g--~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 191 MVAEVQKSLEKQAVIFHFEETVLGIEETANG-IVLET--SEQ--EISCDSGIFALNLHP 244 (452)
T ss_dssp HHHHHHHHHHTTTEEEEETCCEEEEEECSSC-EEEEE--SSC--EEEESEEEECSCCBC
T ss_pred HHHHHHHHHHHcCCEEEeCCEEEEEEccCCe-EEEEE--CCC--EEEeCEEEECcCCCC
Confidence 3333333333345589999999999977775 66665 455 689999999987643
No 94
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=87.37 E-value=0.97 Score=42.51 Aligned_cols=54 Identities=9% Similarity=0.208 Sum_probs=39.5
Q ss_pred hhHHHHHHHHHhcc--ceeeCceeeeEEEcCC-CcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 56 LTMLPEAISKRLGS--KVKLSWKLSGVKKLDS-GEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 56 ~~~L~~~L~~~l~~--~i~~~~~V~~I~~~~~-~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
+....+.+++..+. +++++++|++++.+++ +.|.|++ .+| +++.||+||+|+-.
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~--~~G-~~i~ad~lV~AtG~ 157 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRT--DRG-DEVSARFLVVAAGP 157 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEE--TTC-CEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEE--CCC-CEEEeCEEEECcCC
Confidence 33444444555543 7999999999998765 2478876 677 47999999999884
No 95
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=87.32 E-value=1.8 Score=40.81 Aligned_cols=58 Identities=14% Similarity=0.148 Sum_probs=40.0
Q ss_pred hHHHHHHHHHh---ccceeeCceeeeEEEcC-CCcEEEEEECCCCe-EEEecCEEEEcCCchH
Q 021616 57 TMLPEAISKRL---GSKVKLSWKLSGVKKLD-SGEYSLTYETPEGL-VSLRSRSVVMTVPSYV 114 (310)
Q Consensus 57 ~~L~~~L~~~l---~~~i~~~~~V~~I~~~~-~~~~~v~~~~~~g~-~~~~ad~VI~a~p~~~ 114 (310)
..|.+.|.+.+ +.+|+++++|++|..++ +..+.|.+.+.+|+ ..+.||.||+|+-...
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 34666665554 46899999999999887 53233555434663 2689999999987643
No 96
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=86.85 E-value=1.2 Score=41.14 Aligned_cols=45 Identities=18% Similarity=0.174 Sum_probs=34.6
Q ss_pred HHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 65 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 65 ~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
+..+.++++++.|++|+..++. +.|.+ .+| +++.+|.||+++...
T Consensus 237 ~~~GV~v~~~~~V~~i~~~~~~-~~v~l--~dG-~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 237 RREGVKVMPNAIVQSVGVSSGK-LLIKL--KDG-RKVETDHIVAAVGLE 281 (493)
T ss_dssp HTTTCEEECSCCEEEEEEETTE-EEEEE--TTS-CEEEESEEEECCCEE
T ss_pred HhcCCEEEeCCEEEEEEecCCe-EEEEE--CCC-CEEECCEEEECCCCC
Confidence 3345689999999999876653 66665 577 479999999998763
No 97
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=86.53 E-value=1.3 Score=41.50 Aligned_cols=54 Identities=9% Similarity=0.204 Sum_probs=39.0
Q ss_pred hHHHHHHHHHhc--cceeeCceeeeEEEcCC-CcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 57 TMLPEAISKRLG--SKVKLSWKLSGVKKLDS-GEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 57 ~~L~~~L~~~l~--~~i~~~~~V~~I~~~~~-~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
....+.+++.++ .+|+++++|++++.+++ +.|.|++ .+| +++.||+||+|+-..
T Consensus 97 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~--~~G-~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDT--NHG-DRIRARYLIMASGQL 153 (542)
T ss_dssp HHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEE--TTC-CEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEE--CCC-CEEEeCEEEECcCCC
Confidence 333444455543 47999999999998754 3488876 567 478999999998753
No 98
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=86.40 E-value=2 Score=39.46 Aligned_cols=56 Identities=11% Similarity=-0.006 Sum_probs=37.4
Q ss_pred hhhHHHHHHHHHhccceeeCceeeeEEEcCCC-cEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 55 GLTMLPEAISKRLGSKVKLSWKLSGVKKLDSG-EYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 55 G~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~-~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
.+........+..+.+++++++|++|+..+++ .+.|.+ .+|++++.+|.||+++..
T Consensus 227 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~--~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 227 CIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHM--NDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEE--TTSCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEE--CCCcEEEEcCEEEECCCC
Confidence 34443333333345689999999999876553 256665 566237899999999875
No 99
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=86.34 E-value=1.6 Score=41.11 Aligned_cols=56 Identities=7% Similarity=0.145 Sum_probs=38.5
Q ss_pred HHHHHHHHHh---ccceeeCceeeeEEEcC-CCcEEEEEECCCCe-EEEecCEEEEcCCch
Q 021616 58 MLPEAISKRL---GSKVKLSWKLSGVKKLD-SGEYSLTYETPEGL-VSLRSRSVVMTVPSY 113 (310)
Q Consensus 58 ~L~~~L~~~l---~~~i~~~~~V~~I~~~~-~~~~~v~~~~~~g~-~~~~ad~VI~a~p~~ 113 (310)
.+.+.|.+.+ +.+|+++++|++|..++ +..+.|.+.+.+|+ .++.||.||+|+-..
T Consensus 256 ~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~ 316 (572)
T 1d4d_A 256 HVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGF 316 (572)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCC
Confidence 4666666554 45899999999998876 53234555434563 368999999998753
No 100
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=86.29 E-value=1.7 Score=40.46 Aligned_cols=46 Identities=13% Similarity=0.231 Sum_probs=33.8
Q ss_pred HHhccceeeCceeeeEEEcCCCc---EEEEEECCCCeEEEecCEEEEcCCc
Q 021616 65 KRLGSKVKLSWKLSGVKKLDSGE---YSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 65 ~~l~~~i~~~~~V~~I~~~~~~~---~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
+..+.+|+++++|++|+..+++. +.|++ .+|++++.+|.||+|+..
T Consensus 266 ~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~--~~G~~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 266 KEQGMEIISGSNVTRIEEDANGRVQAVVAMT--PNGEMRIETDFVFLGLGE 314 (523)
T ss_dssp HHTTCEEESSCEEEEEEECTTSBEEEEEEEE--TTEEEEEECSCEEECCCC
T ss_pred HhCCcEEEECCEEEEEEEcCCCceEEEEEEE--CCCcEEEEcCEEEECcCC
Confidence 33456899999999999865542 44554 577327999999999854
No 101
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=86.22 E-value=1.5 Score=40.69 Aligned_cols=57 Identities=14% Similarity=0.192 Sum_probs=39.9
Q ss_pred HHHHHHHHH---hccceeeCceeeeEEEcCCCcEEEEEECCCCe-EEEecCEEEEcCCchH
Q 021616 58 MLPEAISKR---LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPSYV 114 (310)
Q Consensus 58 ~L~~~L~~~---l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~-~~~~ad~VI~a~p~~~ 114 (310)
.|.+.|.+. .+.+|+++++|++|...+++...|++.+.+|+ .++.||.||.|+-...
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 344444443 35689999999999997764223666556674 3789999999987743
No 102
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=86.17 E-value=1.5 Score=40.18 Aligned_cols=44 Identities=18% Similarity=0.240 Sum_probs=34.1
Q ss_pred HhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 66 RLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 66 ~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
..+.+++++++|++|+..+++ +.|.+ .+|++++.+|.||+++..
T Consensus 219 ~~gv~i~~~~~v~~i~~~~~~-~~v~~--~~G~~~i~~D~vv~a~G~ 262 (463)
T 2r9z_A 219 AQGIETHLEFAVAALERDAQG-TTLVA--QDGTRLEGFDSVIWAVGR 262 (463)
T ss_dssp HTTCEEESSCCEEEEEEETTE-EEEEE--TTCCEEEEESEEEECSCE
T ss_pred HCCCEEEeCCEEEEEEEeCCe-EEEEE--eCCcEEEEcCEEEECCCC
Confidence 335689999999999987765 77766 567216899999999765
No 103
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=85.85 E-value=2.6 Score=38.53 Aligned_cols=57 Identities=18% Similarity=0.261 Sum_probs=38.1
Q ss_pred hhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEE---CCCCeEEEecCEEEEcCCch
Q 021616 56 LTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYE---TPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 56 ~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~---~~~g~~~~~ad~VI~a~p~~ 113 (310)
+........+..+.+++++++|++|+.++++.+.+++. +.+| +++.+|.||+++...
T Consensus 222 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~-~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 222 ISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKA-EVITCDVLLVCIGRR 281 (474)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCC-EEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCc-eEEEcCEEEECcCCC
Confidence 33333333334456899999999999876532566542 2345 478999999998653
No 104
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=85.82 E-value=1.3 Score=41.47 Aligned_cols=54 Identities=4% Similarity=0.147 Sum_probs=40.2
Q ss_pred hhHHHHHHHHHhc--cceeeCceeeeEEEcCC-CcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 56 LTMLPEAISKRLG--SKVKLSWKLSGVKKLDS-GEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 56 ~~~L~~~L~~~l~--~~i~~~~~V~~I~~~~~-~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
+....+.+++..+ .+++++++|++++.+++ +.|.|++ .+| +++.||+||+|+-.
T Consensus 89 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~--~~G-~~~~ad~lV~AtG~ 145 (545)
T 3uox_A 89 MLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTL--DNE-EVVTCRFLISATGP 145 (545)
T ss_dssp HHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEE--TTT-EEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEE--CCC-CEEEeCEEEECcCC
Confidence 4444555555554 37999999999998754 3488876 677 57999999999884
No 105
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=85.79 E-value=1.2 Score=38.14 Aligned_cols=52 Identities=19% Similarity=0.312 Sum_probs=39.9
Q ss_pred hHHHHHHHHHhc---cceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 57 TMLPEAISKRLG---SKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 57 ~~L~~~L~~~l~---~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
..+.+.|.+.+. .+++++++|++|+..+++.|.|.+ .+| .+.+|+||+|+-.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~--~~g--~~~~d~vVlAtG~ 121 (332)
T 3lzw_A 67 QELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVT--NEE--THYSKTVIITAGN 121 (332)
T ss_dssp HHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEE--SSE--EEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEE--CCC--EEEeCEEEECCCC
Confidence 456666665543 478999999999998764488876 566 3899999999876
No 106
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=85.75 E-value=1.9 Score=36.91 Aligned_cols=56 Identities=9% Similarity=-0.000 Sum_probs=38.7
Q ss_pred hHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEEC-CCCe-EEEecCEEEEcCCc
Q 021616 57 TMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYET-PEGL-VSLRSRSVVMTVPS 112 (310)
Q Consensus 57 ~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~-~~g~-~~~~ad~VI~a~p~ 112 (310)
..+.+.|.+..+.++++++.|.+|+.++++...|++.+ .+|+ +++.+|.||+++..
T Consensus 212 ~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 269 (338)
T 3itj_A 212 TIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGH 269 (338)
T ss_dssp HHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCE
T ss_pred HHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCC
Confidence 44555565544568999999999998876423366532 2332 47899999999876
No 107
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=85.68 E-value=2.6 Score=38.35 Aligned_cols=55 Identities=18% Similarity=0.233 Sum_probs=37.8
Q ss_pred hhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCe-EEEecCEEEEcCCc
Q 021616 56 LTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPS 112 (310)
Q Consensus 56 ~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~-~~~~ad~VI~a~p~ 112 (310)
+........+..+.+++++++|++|+.++++ +.+.+. .+|+ +++.+|.||+++..
T Consensus 214 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~~v~~~-~~g~~~~~~~D~vv~a~G~ 269 (464)
T 2a8x_A 214 VSKEIEKQFKKLGVTILTATKVESIADGGSQ-VTVTVT-KDGVAQELKAEKVLQAIGF 269 (464)
T ss_dssp HHHHHHHHHHHHTCEEECSCEEEEEEECSSC-EEEEEE-SSSCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHcCCEEEeCcEEEEEEEcCCe-EEEEEE-cCCceEEEEcCEEEECCCC
Confidence 3333333333445689999999999987764 777663 2342 47899999999865
No 108
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=85.64 E-value=1.5 Score=37.68 Aligned_cols=53 Identities=9% Similarity=0.180 Sum_probs=39.7
Q ss_pred hHHHHHHHHHhc---cceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 57 TMLPEAISKRLG---SKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 57 ~~L~~~L~~~l~---~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
..+.+.|.+.+. .++++++.|++|+..++. |.|.+ .+| +++.+|+||+|+-..
T Consensus 65 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~-~~v~~--~~g-~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 65 KDLVKGLVEQVAPFNPVYSLGERAETLEREGDL-FKVTT--SQG-NAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHHHHHHHHGGGCCEEEESCCEEEEEEETTE-EEEEE--TTS-CEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCE-EEEEE--CCC-CEEEeCEEEECCCCC
Confidence 455666655543 478899999999988764 88775 566 478999999998763
No 109
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=85.59 E-value=1.7 Score=37.92 Aligned_cols=53 Identities=25% Similarity=0.305 Sum_probs=39.5
Q ss_pred hHHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 57 TMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 57 ~~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
..+.+.|.+.+ +.+++++++|++|+..+++.|.|++ .+| +++.+|+||+|+-.
T Consensus 74 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~--~~g-~~~~~~~li~AtG~ 129 (360)
T 3ab1_A 74 IDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRT--NTG-NVYRSRAVLIAAGL 129 (360)
T ss_dssp HHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEE--TTS-CEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEE--CCC-cEEEeeEEEEccCC
Confidence 45556665554 3478899999999987653477775 566 47999999999876
No 110
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=85.43 E-value=1.8 Score=39.57 Aligned_cols=56 Identities=16% Similarity=0.173 Sum_probs=37.7
Q ss_pred hHHHHHHHHH---hccc--eeeCceeeeEEEcCC-CcEEEEEEC-CCCe-EEEecCEEEEcCCc
Q 021616 57 TMLPEAISKR---LGSK--VKLSWKLSGVKKLDS-GEYSLTYET-PEGL-VSLRSRSVVMTVPS 112 (310)
Q Consensus 57 ~~L~~~L~~~---l~~~--i~~~~~V~~I~~~~~-~~~~v~~~~-~~g~-~~~~ad~VI~a~p~ 112 (310)
..+.+.|.+. .+.+ |+++++|++|+..++ +.|.|++.+ .+|+ .++.||+||+|+-.
T Consensus 101 ~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~ 164 (464)
T 2xve_A 101 EVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGH 164 (464)
T ss_dssp HHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCS
T ss_pred HHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCC
Confidence 3444444433 3334 899999999998765 248888743 1342 46899999999884
No 111
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=85.20 E-value=2.3 Score=39.31 Aligned_cols=45 Identities=13% Similarity=0.121 Sum_probs=33.9
Q ss_pred hccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 67 LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 67 l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
.+.+++++++|++|+..+++.+.|.+ .+|++.+.+|.||+++...
T Consensus 230 ~gv~i~~~~~v~~i~~~~~~~~~v~~--~~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 230 NNINIVTFADVVEIKKVSDKNLSIHL--SDGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp TTCEEECSCCEEEEEESSTTCEEEEE--TTSCEEEEESEEEECCCBC
T ss_pred CCCEEEECCEEEEEEEcCCceEEEEE--CCCcEEEECCEEEECCCCC
Confidence 34689999999999986543366665 5774228999999998764
No 112
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=85.02 E-value=2.5 Score=38.22 Aligned_cols=45 Identities=11% Similarity=0.203 Sum_probs=33.5
Q ss_pred HHhccceeeCceeeeEEE--cCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 65 KRLGSKVKLSWKLSGVKK--LDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 65 ~~l~~~i~~~~~V~~I~~--~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
+..+.+++++++|++|+. .+++...|.+ .+| +++.+|.||+++..
T Consensus 202 ~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~--~~G-~~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 202 REAGVDIRTGTQVCGFEMSTDQQKVTAVLC--EDG-TRLPADLVIAGIGL 248 (431)
T ss_dssp HHHTCEEECSCCEEEEEECTTTCCEEEEEE--TTS-CEEECSEEEECCCE
T ss_pred HhCCeEEEeCCEEEEEEeccCCCcEEEEEe--CCC-CEEEcCEEEECCCC
Confidence 334568999999999997 4443225665 577 47899999999875
No 113
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=84.89 E-value=1.1 Score=40.55 Aligned_cols=53 Identities=11% Similarity=0.228 Sum_probs=38.7
Q ss_pred HHHHHHHHHh---ccceeeCceeeeEEE---------------cCCCcEEEEEECCCCeEEE--ecCEEEEcCCchH
Q 021616 58 MLPEAISKRL---GSKVKLSWKLSGVKK---------------LDSGEYSLTYETPEGLVSL--RSRSVVMTVPSYV 114 (310)
Q Consensus 58 ~L~~~L~~~l---~~~i~~~~~V~~I~~---------------~~~~~~~v~~~~~~g~~~~--~ad~VI~a~p~~~ 114 (310)
.+.+.|.+.+ +.+|+++++|++|.. .+++.+.|.+ .+| ++ .||.||+|+-...
T Consensus 182 ~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t--~~g--~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 182 KVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVL--SDG--TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEE--TTS--CEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEe--CCC--EEeecCCEEEECCCcCH
Confidence 5666666654 458999999999998 4443234554 567 57 9999999998753
No 114
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=84.82 E-value=2.2 Score=40.03 Aligned_cols=55 Identities=15% Similarity=0.225 Sum_probs=40.6
Q ss_pred HHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEEC-CCCe-EEEecCEEEEcCCchH
Q 021616 59 LPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYET-PEGL-VSLRSRSVVMTVPSYV 114 (310)
Q Consensus 59 L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~-~~g~-~~~~ad~VI~a~p~~~ 114 (310)
|-+.|.+.+...|+++++|++|+.++++ |.|++.+ .+|+ ++++||+||.|.-...
T Consensus 140 l~~~L~~~a~~~v~~~~~v~~~~~~~~~-v~v~~~~~~~G~~~~i~a~~vVgADG~~S 196 (549)
T 2r0c_A 140 LAPLLAEAVGERLRTRSRLDSFEQRDDH-VRATITDLRTGATRAVHARYLVACDGASS 196 (549)
T ss_dssp HHHHHHHHHGGGEECSEEEEEEEECSSC-EEEEEEETTTCCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhcccCcEEEEEEEeCCE-EEEEEEECCCCCEEEEEeCEEEECCCCCc
Confidence 4456666654339999999999998886 8887753 2352 4799999999987744
No 115
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=84.49 E-value=1.4 Score=43.53 Aligned_cols=62 Identities=16% Similarity=0.178 Sum_probs=43.9
Q ss_pred eeeccchh---hHHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 49 VGSFRKGL---TMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 49 ~~~~~gG~---~~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
++...+|. ..++..|.+.+ +.+|+++++|++|..++++.+.|.+ .+| ++.||.||+|+-...
T Consensus 140 ~~~~~~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t--~~G--~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 140 LHVPSDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQT--ADG--VIPADIVVSCAGFWG 207 (830)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE--TTE--EEECSEEEECCGGGH
T ss_pred EEECCCceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEE--CCc--EEECCEEEECCccch
Confidence 44444442 35777776654 4589999999999987764234554 566 689999999998764
No 116
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=84.32 E-value=2.7 Score=37.55 Aligned_cols=43 Identities=14% Similarity=0.089 Sum_probs=33.4
Q ss_pred ceeeCceeeeEEEcCCCcEEEEEEC-CCCe-EEEecCEEEEcCCchH
Q 021616 70 KVKLSWKLSGVKKLDSGEYSLTYET-PEGL-VSLRSRSVVMTVPSYV 114 (310)
Q Consensus 70 ~i~~~~~V~~I~~~~~~~~~v~~~~-~~g~-~~~~ad~VI~a~p~~~ 114 (310)
+|+++++|++|+. +++ +.|++.+ .+|+ +++.+|.||.|.-...
T Consensus 125 ~v~~~~~v~~i~~-~~~-v~v~~~~~~~g~~~~~~ad~vV~AdG~~S 169 (410)
T 3c96_A 125 AVRTGLGVERIEE-RDG-RVLIGARDGHGKPQALGADVLVGADGIHS 169 (410)
T ss_dssp SEEESEEEEEEEE-ETT-EEEEEEEETTSCEEEEEESEEEECCCTTC
T ss_pred EEEECCEEEEEec-CCc-cEEEEecCCCCCceEEecCEEEECCCccc
Confidence 7999999999998 665 8887742 1352 4689999999987744
No 117
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=84.04 E-value=2.6 Score=38.45 Aligned_cols=49 Identities=27% Similarity=0.349 Sum_probs=35.3
Q ss_pred HHhccceeeCceeeeEEEcCCCcEEEEEECC-CC-eEEEecCEEEEcCCchH
Q 021616 65 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETP-EG-LVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 65 ~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~-~g-~~~~~ad~VI~a~p~~~ 114 (310)
+..+.+|+++++|++|+.++++ +.|++.+. +| .+++.+|.||+++....
T Consensus 229 ~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 279 (470)
T 1dxl_A 229 EKQGMKFKLKTKVVGVDTSGDG-VKLTVEPSAGGEQTIIEADVVLVSAGRTP 279 (470)
T ss_dssp HHSSCCEECSEEEEEEECSSSS-EEEEEEESSSCCCEEEEESEEECCCCEEE
T ss_pred HHcCCEEEeCCEEEEEEEcCCe-EEEEEEecCCCcceEEECCEEEECCCCCc
Confidence 3345689999999999987765 77766321 33 24789999999987643
No 118
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=83.65 E-value=1.8 Score=39.64 Aligned_cols=56 Identities=23% Similarity=0.342 Sum_probs=40.9
Q ss_pred hHHHHHHHHHhccceeeCceeeeEEEcC-CCcEEEEEECCCCe-EEEecCEEEEcCCch
Q 021616 57 TMLPEAISKRLGSKVKLSWKLSGVKKLD-SGEYSLTYETPEGL-VSLRSRSVVMTVPSY 113 (310)
Q Consensus 57 ~~L~~~L~~~l~~~i~~~~~V~~I~~~~-~~~~~v~~~~~~g~-~~~~ad~VI~a~p~~ 113 (310)
..+.+.+.+.+..+++++++|++|+..+ ++ +.|.+.+.+|+ +++.+|.||+++...
T Consensus 214 ~~~~~~l~~~l~v~i~~~~~v~~i~~~~~~~-v~v~~~~~~G~~~~i~~D~vi~a~G~~ 271 (466)
T 3l8k_A 214 QDIVNTLLSILKLNIKFNSPVTEVKKIKDDE-YEVIYSTKDGSKKSIFTNSVVLAAGRR 271 (466)
T ss_dssp HHHHHHHHHHHCCCEECSCCEEEEEEEETTE-EEEEECCTTSCCEEEEESCEEECCCEE
T ss_pred HHHHHHHHhcCEEEEEECCEEEEEEEcCCCc-EEEEEEecCCceEEEEcCEEEECcCCC
Confidence 3455666666656899999999999876 64 77776322553 378999999998763
No 119
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=83.59 E-value=2.3 Score=38.63 Aligned_cols=44 Identities=9% Similarity=0.065 Sum_probs=34.1
Q ss_pred cceeeCceeeeEEEcCCCcEEEEEECC-CCe-EEEecCEEEEcCCch
Q 021616 69 SKVKLSWKLSGVKKLDSGEYSLTYETP-EGL-VSLRSRSVVMTVPSY 113 (310)
Q Consensus 69 ~~i~~~~~V~~I~~~~~~~~~v~~~~~-~g~-~~~~ad~VI~a~p~~ 113 (310)
.+|++++.|++|...+++ +.|++... +|+ +++.+|.||+|+-..
T Consensus 331 v~i~~~~~v~~v~~~~~~-~~v~~~~~~~g~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 331 HAFRCMTTVERATATAQG-IELALRDAGSGELSVETYDAVILATGYE 376 (463)
T ss_dssp SEEETTEEEEEEEEETTE-EEEEEEETTTCCEEEEEESEEEECCCEE
T ss_pred eEEEeCCEEEEEEecCCE-EEEEEEEcCCCCeEEEECCEEEEeeCCC
Confidence 479999999999988775 88877422 453 358999999998763
No 120
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=83.56 E-value=1.3 Score=37.80 Aligned_cols=38 Identities=18% Similarity=0.173 Sum_probs=31.2
Q ss_pred CCCCeEEeecccCCCc--hhHHHHHHHHHHHHHHHHhhhc
Q 021616 270 GYQGLFLGGNYVAGVA--LGRCVESAYEVASEVSNFLSQY 307 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g--v~~ai~sG~~aA~~i~~~l~~~ 307 (310)
..|+||.|||-..+.. +.-|+.+|..||..+.+.|.+|
T Consensus 275 s~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~~~~yL~~H 314 (314)
T 4a5l_A 275 SVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCEKWLQTH 314 (314)
T ss_dssp SSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEeccCCcchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4689999999765443 5668889999999999999876
No 121
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=83.36 E-value=2.4 Score=39.90 Aligned_cols=58 Identities=14% Similarity=0.069 Sum_probs=41.4
Q ss_pred hHHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEEC-CCC-eEEEecCEEEEcCCchH
Q 021616 57 TMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYET-PEG-LVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 57 ~~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~-~~g-~~~~~ad~VI~a~p~~~ 114 (310)
..|+..|++.+ +.+|+++++|++|..++++.+.|++.+ .+| ..++.||.||.|+-+..
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 45666666553 568999999999999877534566532 133 24789999999998754
No 122
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=83.19 E-value=1.9 Score=35.26 Aligned_cols=33 Identities=24% Similarity=0.251 Sum_probs=27.8
Q ss_pred CCCeEEeecccCCCch-hHHHHHHHHHHHHHHHHh
Q 021616 271 YQGLFLGGNYVAGVAL-GRCVESAYEVASEVSNFL 304 (310)
Q Consensus 271 ~~~l~~aG~~~~g~gv-~~ai~sG~~aA~~i~~~l 304 (310)
.|+||.+||.. +.++ ..++.+|+.+|+.|++.+
T Consensus 198 ~p~iya~G~~a-~~g~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 198 LEGLYAVGLCV-REGDYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp SBSEEECGGGT-SCCCHHHHHHHHHHHHHHHHHHC
T ss_pred cccceeeeecc-cCccHHHHHHHHHHHHHHHHhhc
Confidence 58999999987 5554 567999999999998875
No 123
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=83.14 E-value=2.6 Score=38.25 Aligned_cols=47 Identities=23% Similarity=0.323 Sum_probs=34.6
Q ss_pred HhccceeeCceeeeEEEcCCCcEEEEEECC-CCeEEEecCEEEEcCCchH
Q 021616 66 RLGSKVKLSWKLSGVKKLDSGEYSLTYETP-EGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 66 ~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~-~g~~~~~ad~VI~a~p~~~ 114 (310)
..+.+++++++|++|+.++++ +.+++.+. +| +++.+|.||+++....
T Consensus 223 ~~gv~i~~~~~v~~i~~~~~~-~~v~~~~~g~~-~~~~~D~vv~a~G~~p 270 (455)
T 1ebd_A 223 KKGVEVVTNALAKGAEEREDG-VTVTYEANGET-KTIDADYVLVTVGRRP 270 (455)
T ss_dssp HTTCEEEESEEEEEEEEETTE-EEEEEEETTEE-EEEEESEEEECSCEEE
T ss_pred HCCCEEEeCCEEEEEEEeCCe-EEEEEEeCCce-eEEEcCEEEECcCCCc
Confidence 345689999999999987764 66665321 33 4789999999987643
No 124
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=83.03 E-value=4.1 Score=34.59 Aligned_cols=55 Identities=11% Similarity=0.099 Sum_probs=36.9
Q ss_pred HHHHHHHH---hccceeeCceeeeEEEcCCCcEEEEEECC-C-C-eEEEecCEEEEcCCch
Q 021616 59 LPEAISKR---LGSKVKLSWKLSGVKKLDSGEYSLTYETP-E-G-LVSLRSRSVVMTVPSY 113 (310)
Q Consensus 59 L~~~L~~~---l~~~i~~~~~V~~I~~~~~~~~~v~~~~~-~-g-~~~~~ad~VI~a~p~~ 113 (310)
+.+.|.+. .+.+++++++|++|..++++...|.+.+. + | .+++.+|.||+++...
T Consensus 186 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 186 LIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp HHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred HHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 44455444 34589999999999987654234665431 1 3 2478999999998764
No 125
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=82.99 E-value=2.9 Score=38.45 Aligned_cols=46 Identities=26% Similarity=0.389 Sum_probs=34.7
Q ss_pred hccceeeCceeeeEEEcCCCcEEEEEECCC-C-eEEEecCEEEEcCCch
Q 021616 67 LGSKVKLSWKLSGVKKLDSGEYSLTYETPE-G-LVSLRSRSVVMTVPSY 113 (310)
Q Consensus 67 l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~-g-~~~~~ad~VI~a~p~~ 113 (310)
.+.+++++++|++|+..+++ +.+.+.+.+ | .+++.+|.||+++...
T Consensus 252 ~gV~v~~~~~v~~i~~~~~~-~~v~~~~~~~g~~~~i~~D~Vi~a~G~~ 299 (491)
T 3urh_A 252 QGIDFKLGAKVTGAVKSGDG-AKVTFEPVKGGEATTLDAEVVLIATGRK 299 (491)
T ss_dssp TTCEEECSEEEEEEEEETTE-EEEEEEETTSCCCEEEEESEEEECCCCE
T ss_pred CCCEEEECCeEEEEEEeCCE-EEEEEEecCCCceEEEEcCEEEEeeCCc
Confidence 34589999999999988775 777764322 4 2478999999998753
No 126
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=82.93 E-value=3.3 Score=38.13 Aligned_cols=44 Identities=7% Similarity=0.003 Sum_probs=34.6
Q ss_pred cceeeCceeeeEEEcCCCcEEEEEECCCCe-EEEecCEEEEcCCch
Q 021616 69 SKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPSY 113 (310)
Q Consensus 69 ~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~-~~~~ad~VI~a~p~~ 113 (310)
.+++++++|++|+..+++ +.+++.+.+|+ +++.+|.||+++...
T Consensus 229 V~i~~~~~v~~i~~~~~~-v~v~~~~~~G~~~~i~~D~Vi~a~G~~ 273 (492)
T 3ic9_A 229 FYFDAKARVISTIEKEDA-VEVIYFDKSGQKTTESFQYVLAATGRK 273 (492)
T ss_dssp SEEETTCEEEEEEECSSS-EEEEEECTTCCEEEEEESEEEECSCCE
T ss_pred cEEEECCEEEEEEEcCCE-EEEEEEeCCCceEEEECCEEEEeeCCc
Confidence 489999999999988875 77776433552 478999999998763
No 127
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=82.91 E-value=2.9 Score=38.12 Aligned_cols=46 Identities=22% Similarity=0.300 Sum_probs=34.2
Q ss_pred HHhccceeeCceeeeEEEcCCCcEEEEEECCC--Ce-EEEecCEEEEcCCc
Q 021616 65 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPE--GL-VSLRSRSVVMTVPS 112 (310)
Q Consensus 65 ~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~--g~-~~~~ad~VI~a~p~ 112 (310)
+..+.+++++++|++|+..+++ +.|++.. + |+ +++.+|.||+++..
T Consensus 221 ~~~gV~i~~~~~v~~i~~~~~~-~~v~~~~-~~~g~~~~i~~D~vv~a~G~ 269 (464)
T 2eq6_A 221 EKEGIRVRTKTKAVGYEKKKDG-LHVRLEP-AEGGEGEEVVVDKVLVAVGR 269 (464)
T ss_dssp HHTTCEEECSEEEEEEEEETTE-EEEEEEE-TTCCSCEEEEESEEEECSCE
T ss_pred HhcCCEEEcCCEEEEEEEeCCE-EEEEEee-cCCCceeEEEcCEEEECCCc
Confidence 3345689999999999987764 7777631 3 52 36899999999854
No 128
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=82.59 E-value=3 Score=39.06 Aligned_cols=43 Identities=14% Similarity=0.081 Sum_probs=32.5
Q ss_pred ccceeeCceeeeEEEcCCCc-EEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 68 GSKVKLSWKLSGVKKLDSGE-YSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 68 ~~~i~~~~~V~~I~~~~~~~-~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
+.+++++ +|++|...+++. +.|.+ .+| +++.||.||.|+-...
T Consensus 209 Gv~i~~~-~V~~i~~~~~g~~~~v~~--~~G-~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 209 GVRHVED-RVEHVQRDANGNIESVRT--ATG-RVFDADLFVDCSGFRG 252 (550)
T ss_dssp CCEEEEC-CEEEEEECTTSCEEEEEE--TTS-CEEECSEEEECCGGGC
T ss_pred CcEEEEC-eEeEEEEcCCCCEEEEEE--CCC-CEEECCEEEECCCCch
Confidence 5689999 999999876542 34444 567 4799999999987643
No 129
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=82.49 E-value=2.7 Score=37.14 Aligned_cols=56 Identities=11% Similarity=0.052 Sum_probs=38.6
Q ss_pred HHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEECCCCe-EEEecCEEEEcCCchH
Q 021616 58 MLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPSYV 114 (310)
Q Consensus 58 ~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~-~~~~ad~VI~a~p~~~ 114 (310)
.+.+.|.+.+ +.+|+++++|++|+.++++.+.|++. .+|+ .++++|.||.|.-...
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~-~~g~~~~~~a~~vV~AdG~~S 163 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFE-RDGERLRLDCDYIAGCDGFHG 163 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEE-ETTEEEEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEe-cCCcEEEEEeCEEEECCCCCc
Confidence 3444554443 45899999999999874323777762 3563 2689999999987644
No 130
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=81.97 E-value=3 Score=38.94 Aligned_cols=54 Identities=20% Similarity=0.272 Sum_probs=37.2
Q ss_pred hhhHHHHHHHHHhccceeeCceeeeEEEc-------------------CCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 55 GLTMLPEAISKRLGSKVKLSWKLSGVKKL-------------------DSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 55 G~~~L~~~L~~~l~~~i~~~~~V~~I~~~-------------------~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
.+........+..+.++++++.|++|+.+ ++ .+.+.. .+| +++.+|.||+++..
T Consensus 193 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~--~~g-~~i~~D~vi~a~G~ 265 (565)
T 3ntd_A 193 EMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKG-HLSLTL--SNG-ELLETDLLIMAIGV 265 (565)
T ss_dssp HHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTC-EEEEEE--TTS-CEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCC-cEEEEE--cCC-CEEEcCEEEECcCC
Confidence 34444433334445689999999999873 33 366665 567 47999999999765
No 131
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=81.48 E-value=3.1 Score=39.43 Aligned_cols=56 Identities=20% Similarity=0.100 Sum_probs=38.9
Q ss_pred HHHHHHHHH---hccceeeCceeeeEEEcCCCcEEEEEECCCCe-EEEecCEEEEcCCchH
Q 021616 58 MLPEAISKR---LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPSYV 114 (310)
Q Consensus 58 ~L~~~L~~~---l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~-~~~~ad~VI~a~p~~~ 114 (310)
.+.+.|.+. .+.+++.+++|++|...+++.+.|++.+ +|+ .++.||.||.|+-...
T Consensus 129 ~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~-~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 129 EFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRR-GGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEE-TTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEec-CCceEEEEcCEEEECCCCcc
Confidence 344444433 4568999999999998644347787742 452 4789999999987643
No 132
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=81.41 E-value=3.4 Score=37.47 Aligned_cols=55 Identities=13% Similarity=0.151 Sum_probs=36.3
Q ss_pred hhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 56 LTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 56 ~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
+........+..+.+|+++++|++|+..+++ +.... . +| +++.+|.||+++....
T Consensus 193 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-v~~v~-~-~g-~~i~~D~vv~a~G~~p 247 (452)
T 2cdu_A 193 FTDILAKDYEAHGVNLVLGSKVAAFEEVDDE-IITKT-L-DG-KEIKSDIAILCIGFRP 247 (452)
T ss_dssp HHHHHHHHHHHTTCEEEESSCEEEEEEETTE-EEEEE-T-TS-CEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHCCCEEEcCCeeEEEEcCCCe-EEEEE-e-CC-CEEECCEEEECcCCCC
Confidence 3333333334445699999999999875553 43222 2 56 4799999999987643
No 133
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=81.10 E-value=3 Score=39.35 Aligned_cols=57 Identities=14% Similarity=0.073 Sum_probs=39.5
Q ss_pred HHHHHHHHH---hccceeeCceeeeEEEcCCCcEEEEEEC-CCCe-EEEecCEEEEcCCchH
Q 021616 58 MLPEAISKR---LGSKVKLSWKLSGVKKLDSGEYSLTYET-PEGL-VSLRSRSVVMTVPSYV 114 (310)
Q Consensus 58 ~L~~~L~~~---l~~~i~~~~~V~~I~~~~~~~~~v~~~~-~~g~-~~~~ad~VI~a~p~~~ 114 (310)
.++..|++. .+.+|+.+++|++|..++++.+.|.+.+ .+|+ .++.||.||+|+-+..
T Consensus 189 ~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 189 RLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 455555544 3568999999999998876434566532 1332 3689999999998764
No 134
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=81.01 E-value=2.7 Score=35.58 Aligned_cols=53 Identities=19% Similarity=0.193 Sum_probs=37.4
Q ss_pred HHHHHHHHHh---ccceeeCceeeeEEEcCC--CcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 58 MLPEAISKRL---GSKVKLSWKLSGVKKLDS--GEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 58 ~L~~~L~~~l---~~~i~~~~~V~~I~~~~~--~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
.+.+.+.+.+ +.+++++++|+.|+...+ +.+.|.+ ++| +++.+|+||+|+-..
T Consensus 57 ~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~--~~g-~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 57 KLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIET--ASG-AVLKARSIIVATGAK 114 (310)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEE--TTS-CEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEE--CCC-CEEEeCEEEECcCCC
Confidence 4555554443 458999999999987532 2377776 566 478999999998763
No 135
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=80.53 E-value=3.4 Score=37.73 Aligned_cols=46 Identities=20% Similarity=0.212 Sum_probs=33.0
Q ss_pred HhccceeeCceeeeEEE--cCCCcEEEEEEC---CCCeEEEecCEEEEcCCch
Q 021616 66 RLGSKVKLSWKLSGVKK--LDSGEYSLTYET---PEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 66 ~l~~~i~~~~~V~~I~~--~~~~~~~v~~~~---~~g~~~~~ad~VI~a~p~~ 113 (310)
..+.+++++++|++|+. .+++ +.|.+.. .+| +++.+|.||+++...
T Consensus 236 ~~gv~i~~~~~v~~i~~~~~~~~-~~v~~~~~~~g~~-~~~~~D~vv~a~G~~ 286 (478)
T 1v59_A 236 KQGLDFKLSTKVISAKRNDDKNV-VEIVVEDTKTNKQ-ENLEAEVLLVAVGRR 286 (478)
T ss_dssp HTTCEEECSEEEEEEEEETTTTE-EEEEEEETTTTEE-EEEEESEEEECSCEE
T ss_pred HCCCEEEeCCEEEEEEEecCCCe-EEEEEEEcCCCCc-eEEECCEEEECCCCC
Confidence 33568999999999997 4443 6666531 133 478999999998653
No 136
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=80.46 E-value=3.9 Score=37.70 Aligned_cols=52 Identities=10% Similarity=0.008 Sum_probs=36.4
Q ss_pred HHHHHHHH---hccceeeCceeeeEEEcCCCc-EEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 59 LPEAISKR---LGSKVKLSWKLSGVKKLDSGE-YSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 59 L~~~L~~~---l~~~i~~~~~V~~I~~~~~~~-~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
+.+.|.+. .+.+++.+ +|++|..++++. +.|++ .+| +++++|.||.|+-...
T Consensus 175 l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~--~~g-~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 175 VARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHT--KQH-GEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEE--SSS-CEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEE--CCC-CEEEcCEEEECCCcch
Confidence 44444443 45689999 999999866542 34544 567 4799999999987753
No 137
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=80.44 E-value=2.7 Score=37.46 Aligned_cols=41 Identities=15% Similarity=0.144 Sum_probs=31.7
Q ss_pred HhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 66 RLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 66 ~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
..+.+++++++|++|+..+. .|++ .+| +++.||++|+||-.
T Consensus 74 ~~~i~~~~~~~V~~id~~~~---~v~~--~~g-~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 74 KNNIKVITSEFATSIDPNNK---LVTL--KSG-EKIKYEKLIIASGS 114 (385)
T ss_dssp HTTCEEECSCCEEEEETTTT---EEEE--TTS-CEEECSEEEECCCE
T ss_pred HCCCEEEeCCEEEEEECCCC---EEEE--CCC-CEEECCEEEEecCC
Confidence 34457999999999987665 3444 567 47999999999875
No 138
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=79.84 E-value=6 Score=36.16 Aligned_cols=46 Identities=20% Similarity=0.157 Sum_probs=33.4
Q ss_pred hccceeeCceeeeEEEcCCCcEEEEEECCC-C-eEEEecCEEEEcCCc
Q 021616 67 LGSKVKLSWKLSGVKKLDSGEYSLTYETPE-G-LVSLRSRSVVMTVPS 112 (310)
Q Consensus 67 l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~-g-~~~~~ad~VI~a~p~ 112 (310)
.+.+|++++.|++|+..+++.+.|++.+.+ | ..++.+|.||+++..
T Consensus 240 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 240 RGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp TTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCE
T ss_pred CCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccc
Confidence 345899999999999876544666663322 2 236899999999865
No 139
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=79.31 E-value=2.1 Score=39.34 Aligned_cols=45 Identities=16% Similarity=0.141 Sum_probs=33.4
Q ss_pred hccceeeCceeeeEEEcCCCcEEEEEEC-CC-CeEEEecCEEEEcCCch
Q 021616 67 LGSKVKLSWKLSGVKKLDSGEYSLTYET-PE-GLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 67 l~~~i~~~~~V~~I~~~~~~~~~v~~~~-~~-g~~~~~ad~VI~a~p~~ 113 (310)
.+.+++++++|++|+.++++ +.|++.+ .+ | +++.+|.||+++...
T Consensus 239 ~gV~i~~~~~v~~i~~~~~~-~~v~~~~~~~~g-~~~~~D~vv~a~G~~ 285 (482)
T 1ojt_A 239 RFDNIMVNTKTVAVEPKEDG-VYVTFEGANAPK-EPQRYDAVLVAAGRA 285 (482)
T ss_dssp GEEEEECSCEEEEEEEETTE-EEEEEESSSCCS-SCEEESCEEECCCEE
T ss_pred cCCEEEECCEEEEEEEcCCe-EEEEEeccCCCc-eEEEcCEEEECcCCC
Confidence 34589999999999987764 6777632 11 5 368899999998653
No 140
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=79.29 E-value=1.3 Score=40.40 Aligned_cols=37 Identities=11% Similarity=0.173 Sum_probs=29.3
Q ss_pred CCCCeEEeecc------cCCCchhHHHHHHHHHHHHHHHHhhh
Q 021616 270 GYQGLFLGGNY------VAGVALGRCVESAYEVASEVSNFLSQ 306 (310)
Q Consensus 270 ~~~~l~~aG~~------~~g~gv~~ai~sG~~aA~~i~~~l~~ 306 (310)
..+|||+||+- +.|.++..|+.+|+.|++.+.+....
T Consensus 403 ~i~GLy~aGEv~~v~g~~GG~~l~~a~~~G~~Ag~~aa~~~~~ 445 (447)
T 2i0z_A 403 FTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGENAKM 445 (447)
T ss_dssp SSBTEEECGGGBSCBCCTTTHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred cCCCEEEEEeeccCccCCCcHHHHHHHHHHHHHHHHHHHhhhh
Confidence 57999999985 33566889999999999998776544
No 141
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=79.25 E-value=3 Score=38.54 Aligned_cols=57 Identities=18% Similarity=0.225 Sum_probs=41.5
Q ss_pred hHHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEEC-CCCe-EEEecCEEEEcCCchH
Q 021616 57 TMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYET-PEGL-VSLRSRSVVMTVPSYV 114 (310)
Q Consensus 57 ~~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~-~~g~-~~~~ad~VI~a~p~~~ 114 (310)
..++..|.+.+ +.+|+++++|++|..+++ .+.|.+.+ .+|+ .++.||.||.|+-+..
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~-~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARRENG-LWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEETT-EEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCC-EEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 45666666554 468999999999998775 47777632 3452 3689999999998764
No 142
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=79.12 E-value=5.9 Score=36.32 Aligned_cols=48 Identities=19% Similarity=0.205 Sum_probs=33.9
Q ss_pred HhccceeeCceeeeEEEcCCCcEEEEEECC-CCe-EEEecCEEEEcCCch
Q 021616 66 RLGSKVKLSWKLSGVKKLDSGEYSLTYETP-EGL-VSLRSRSVVMTVPSY 113 (310)
Q Consensus 66 ~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~-~g~-~~~~ad~VI~a~p~~ 113 (310)
..+.++++++.|++|...+++.+.|++.+. +|+ .++.+|.||+++...
T Consensus 237 ~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 237 SHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRV 286 (488)
T ss_dssp HTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred HCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCC
Confidence 334589999999999886544466766432 353 247899999998753
No 143
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=78.85 E-value=3.7 Score=37.42 Aligned_cols=42 Identities=21% Similarity=0.210 Sum_probs=32.4
Q ss_pred hccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 67 LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 67 l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
.+.+++++++|++|+.+++. +.|.+ . + .++.+|.||+++...
T Consensus 229 ~Gv~i~~~~~v~~i~~~~~~-~~v~~--~-~-~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 229 EGIEVLEHTQASQVAHMDGE-FVLTT--T-H-GELRADKLLVATGRT 270 (467)
T ss_dssp TTCEEETTCCEEEEEEETTE-EEEEE--T-T-EEEEESEEEECSCEE
T ss_pred CCCEEEcCCEEEEEEEeCCE-EEEEE--C-C-cEEEcCEEEECCCCC
Confidence 34689999999999886653 66665 3 4 378999999998764
No 144
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=78.73 E-value=3.7 Score=34.65 Aligned_cols=56 Identities=9% Similarity=-0.005 Sum_probs=35.7
Q ss_pred hHHHHHHHHHh----ccceeeCceeeeEEEcCCCcEEEEEEC-------CC---C-eEEEecCEEEEcCCc
Q 021616 57 TMLPEAISKRL----GSKVKLSWKLSGVKKLDSGEYSLTYET-------PE---G-LVSLRSRSVVMTVPS 112 (310)
Q Consensus 57 ~~L~~~L~~~l----~~~i~~~~~V~~I~~~~~~~~~v~~~~-------~~---g-~~~~~ad~VI~a~p~ 112 (310)
..+...|.+.+ +.+++++++|++|..+++....|.+.+ .+ | ..++.||.||+|+-.
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~ 189 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGH 189 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCC
Confidence 34555555443 348999999999998766322344321 12 1 246899999999764
No 145
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=78.29 E-value=3.9 Score=34.12 Aligned_cols=53 Identities=4% Similarity=0.069 Sum_probs=38.3
Q ss_pred hHHHHHHHHHhcc--ce-eeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 57 TMLPEAISKRLGS--KV-KLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 57 ~~L~~~L~~~l~~--~i-~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
..+.+.+.+.+.. .+ .++++|+.|+..+++ |.|++ .+| +++.+|+||+|+-..
T Consensus 56 ~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~-~~v~~--~~g-~~~~~d~vviAtG~~ 111 (297)
T 3fbs_A 56 GEIIAEARRQIERYPTIHWVEGRVTDAKGSFGE-FIVEI--DGG-RRETAGRLILAMGVT 111 (297)
T ss_dssp HHHHHHHHHHHTTCTTEEEEESCEEEEEEETTE-EEEEE--TTS-CEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCe-EEEEE--CCC-CEEEcCEEEECCCCC
Confidence 4566666666542 22 236799999998875 88876 567 479999999998763
No 146
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=77.71 E-value=6.5 Score=35.85 Aligned_cols=58 Identities=17% Similarity=0.082 Sum_probs=37.0
Q ss_pred hhHHHHHHHHHhccceeeCceeeeEEEcCCC-cEEEEEECCC-Ce---EEEecCEEEEcCCch
Q 021616 56 LTMLPEAISKRLGSKVKLSWKLSGVKKLDSG-EYSLTYETPE-GL---VSLRSRSVVMTVPSY 113 (310)
Q Consensus 56 ~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~-~~~v~~~~~~-g~---~~~~ad~VI~a~p~~ 113 (310)
+........+..+.++++++.|++|+..+++ .+.|.+.+.+ |+ +++.+|.||+++...
T Consensus 230 ~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~ 292 (478)
T 3dk9_A 230 ISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRV 292 (478)
T ss_dssp HHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccc
Confidence 3333333333345689999999999987665 2455552211 21 478999999998753
No 147
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=77.66 E-value=4.5 Score=34.20 Aligned_cols=52 Identities=10% Similarity=0.141 Sum_probs=36.6
Q ss_pred hHHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 57 TMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 57 ~~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
..+.+.+.+.+ +.++++ ++|.+|+..++. +.|.. .+| .++.+|+||+|+-..
T Consensus 70 ~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~-~~v~~--~~g-~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 70 SDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDE-FVVKT--KRK-GEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--C-EEEEE--SSS-CEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCE-EEEEE--CCC-CEEEcCEEEECcCCC
Confidence 34555555443 347888 999999988775 88876 566 478999999998664
No 148
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=77.02 E-value=5.2 Score=37.20 Aligned_cols=53 Identities=13% Similarity=0.151 Sum_probs=36.9
Q ss_pred HHHHHHHHH---hccceeeCceeeeEEEcCCCc-EEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 58 MLPEAISKR---LGSKVKLSWKLSGVKKLDSGE-YSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 58 ~L~~~L~~~---l~~~i~~~~~V~~I~~~~~~~-~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
.|.+.|.+. .+.+++.+ +|++|...+++. +.|++ .+| +++.+|.||.|+-...
T Consensus 166 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~--~~g-~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 166 LVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLT--KEG-RTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEE--TTS-CEECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEE--CCC-cEEEeCEEEECCCCch
Confidence 444455444 34689999 899999876652 34554 567 4799999999987643
No 149
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=76.88 E-value=0.78 Score=40.90 Aligned_cols=40 Identities=10% Similarity=0.070 Sum_probs=32.6
Q ss_pred cceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 69 SKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 69 ~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
.++++++.|..++.+.++ ..+.+ .+| +++.+|.||+++|.
T Consensus 217 i~v~~~~~v~~v~~~~~~-~~v~~--~~g-~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 217 IEWHPGPDAAVVKTDTEA-MTVET--SFG-ETFKAAVINLIPPQ 256 (401)
T ss_dssp EEEECTTTTCEEEEETTT-TEEEE--TTS-CEEECSEEEECCCE
T ss_pred cEEEeCceEEEEEecccc-eEEEc--CCC-cEEEeeEEEEecCc
Confidence 379999999999988775 56665 677 58999999998875
No 150
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=76.58 E-value=4 Score=34.83 Aligned_cols=52 Identities=12% Similarity=0.229 Sum_probs=36.9
Q ss_pred HHHHHHHHH---hccceeeCceeeeEEEcCCCcEEEEEEC-CCCeEEEecCEEEEcCCc
Q 021616 58 MLPEAISKR---LGSKVKLSWKLSGVKKLDSGEYSLTYET-PEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 58 ~L~~~L~~~---l~~~i~~~~~V~~I~~~~~~~~~v~~~~-~~g~~~~~ad~VI~a~p~ 112 (310)
.+.+.|.+. .+.++++++ |.+|+..++. |.+.... .++ ..+.+|+||+|+-.
T Consensus 85 ~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~-~~v~~~~~~~~-~~~~~d~vvlAtG~ 140 (338)
T 3itj_A 85 ELMDRMREQSTKFGTEIITET-VSKVDLSSKP-FKLWTEFNEDA-EPVTTDAIILATGA 140 (338)
T ss_dssp HHHHHHHHHHHHTTCEEECSC-EEEEECSSSS-EEEEETTCSSS-CCEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHcCCEEEEeE-EEEEEEcCCE-EEEEEEecCCC-cEEEeCEEEECcCC
Confidence 455555444 345899998 9999988875 8877522 244 47899999999766
No 151
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=76.47 E-value=5.8 Score=36.75 Aligned_cols=45 Identities=11% Similarity=0.017 Sum_probs=32.0
Q ss_pred hccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 67 LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 67 l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
.+.+++.+ .|++|+.++++ +.+.+.+.+|. +++||.||.|+-...
T Consensus 189 ~Gv~i~~~-~v~~i~~~~~g-~~~~v~~~~g~-~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 189 LGVTHIRD-HVSQIINNQHG-DIEKLITKQNG-EISGQLFIDCTGAKS 233 (526)
T ss_dssp SCCEEEEC-CEEEEEECTTS-CEEEEEESSSC-EEECSEEEECSGGGC
T ss_pred CCCEEEEe-EEEEEEecCCC-cEEEEEECCCC-EEEcCEEEECCCcch
Confidence 45689999 59999987665 43333235663 599999999987643
No 152
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=76.43 E-value=6.5 Score=35.10 Aligned_cols=50 Identities=14% Similarity=0.259 Sum_probs=34.5
Q ss_pred hhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 56 LTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 56 ~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
+........+..+.+++++++|++|+ ++ .|++ .+| +++.+|.||+++...
T Consensus 189 ~~~~l~~~l~~~GV~i~~~~~v~~i~--~~---~v~~--~~g-~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 189 LADFVARYHAAQGVDLRFERSVTGSV--DG---VVLL--DDG-TRIAADMVVVGIGVL 238 (408)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEE--TT---EEEE--TTS-CEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHcCcEEEeCCEEEEEE--CC---EEEE--CCC-CEEEcCEEEECcCCC
Confidence 33333333344456899999999998 32 3454 567 479999999998763
No 153
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=75.96 E-value=4.5 Score=34.18 Aligned_cols=51 Identities=18% Similarity=0.280 Sum_probs=36.5
Q ss_pred hHHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 57 TMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 57 ~~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
..+.+.|.+.+ +.++++ ++|.+|+..+++ |.|++ .+| +++.+|+||+|+-.
T Consensus 59 ~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~-~~v~~--~~g-~~~~~~~vv~AtG~ 112 (311)
T 2q0l_A 59 LDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSH-FVILA--EDG-KTFEAKSVIIATGG 112 (311)
T ss_dssp HHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTE-EEEEE--TTS-CEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCE-EEEEE--cCC-CEEECCEEEECCCC
Confidence 34555554443 346777 799999988774 88765 466 47999999999875
No 154
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=75.95 E-value=6.6 Score=36.24 Aligned_cols=56 Identities=14% Similarity=0.159 Sum_probs=38.9
Q ss_pred hHHHHHHHHHhccceeeCceeeeEEEcCCC-------cEEEEEECC-CC-eEEEecCEEEEcCCc
Q 021616 57 TMLPEAISKRLGSKVKLSWKLSGVKKLDSG-------EYSLTYETP-EG-LVSLRSRSVVMTVPS 112 (310)
Q Consensus 57 ~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~-------~~~v~~~~~-~g-~~~~~ad~VI~a~p~ 112 (310)
..-.+..+++++..|+++++|++|++.+.+ .|.|++.+. .| .+++.|+.||+++..
T Consensus 148 ~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 148 EDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 333444456666679999999999876532 388887432 23 246899999999884
No 155
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=75.82 E-value=1.5 Score=39.32 Aligned_cols=53 Identities=8% Similarity=0.098 Sum_probs=35.0
Q ss_pred hHHHHHHHHHh---ccceeeCceee---------eEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 57 TMLPEAISKRL---GSKVKLSWKLS---------GVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 57 ~~L~~~L~~~l---~~~i~~~~~V~---------~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
..+.+.|.+.+ +.+|+.+++|+ +|..++++ |.|. +.+| ++.||.||+|+-...
T Consensus 172 ~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~-v~v~--~~~g--~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 172 GSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTH-QIVV--HETR--QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC--------C--BCCE--EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCe-EEEE--ECCc--EEECCEEEECCCccH
Confidence 44777776655 35799999999 98877664 6554 3555 689999999998753
No 156
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=75.82 E-value=5.2 Score=33.77 Aligned_cols=54 Identities=15% Similarity=0.040 Sum_probs=35.8
Q ss_pred HHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEEC-CCCe-EEEecCEEEEcCCc
Q 021616 59 LPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYET-PEGL-VSLRSRSVVMTVPS 112 (310)
Q Consensus 59 L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~-~~g~-~~~~ad~VI~a~p~ 112 (310)
+.+.|.+..+.+++++++|++|..++++...|.+.. .+|+ .++.+|.||+++..
T Consensus 184 ~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 184 TLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp HHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecC
Confidence 455554433458999999999987755322455532 2453 36899999998864
No 157
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=75.01 E-value=3.8 Score=37.79 Aligned_cols=58 Identities=10% Similarity=0.126 Sum_probs=39.3
Q ss_pred hHHHHHHHHHh---ccceeeCceeeeEEEcC--CCcEEEEEECC-CCe-EEEecCEEEEcCCchH
Q 021616 57 TMLPEAISKRL---GSKVKLSWKLSGVKKLD--SGEYSLTYETP-EGL-VSLRSRSVVMTVPSYV 114 (310)
Q Consensus 57 ~~L~~~L~~~l---~~~i~~~~~V~~I~~~~--~~~~~v~~~~~-~g~-~~~~ad~VI~a~p~~~ 114 (310)
..|.+.|.+.+ +.+|+++++|++|...+ ++.+.|++... +|+ +++.+|.||.|+-...
T Consensus 166 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 166 RQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 34445555443 45899999999998752 22377776434 552 3589999999987754
No 158
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=74.65 E-value=7.1 Score=33.23 Aligned_cols=55 Identities=11% Similarity=0.059 Sum_probs=36.2
Q ss_pred HHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEEC-CCCe-EEEecCEEEEcCCch
Q 021616 58 MLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYET-PEGL-VSLRSRSVVMTVPSY 113 (310)
Q Consensus 58 ~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~-~~g~-~~~~ad~VI~a~p~~ 113 (310)
.+.+.+.+..+.+++++++|++|..++. ...|.+.. .+|+ .++.+|.||+++...
T Consensus 192 ~~~~~l~~~~gv~i~~~~~v~~i~~~~~-v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 248 (325)
T 2q7v_A 192 VAQARAFANPKMKFIWDTAVEEIQGADS-VSGVKLRNLKTGEVSELATDGVFIFIGHV 248 (325)
T ss_dssp HHHHHHHTCTTEEEECSEEEEEEEESSS-EEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHHHHhcCCceEecCCceEEEccCCc-EEEEEEEECCCCcEEEEEcCEEEEccCCC
Confidence 3445554433458999999999987533 23555532 2553 368999999998653
No 159
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=74.50 E-value=5.6 Score=33.61 Aligned_cols=54 Identities=15% Similarity=0.148 Sum_probs=37.1
Q ss_pred HHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEEC-CCCe-EEEecCEEEEcCCc
Q 021616 58 MLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYET-PEGL-VSLRSRSVVMTVPS 112 (310)
Q Consensus 58 ~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~-~~g~-~~~~ad~VI~a~p~ 112 (310)
.+.+.+.+..+.+++++++|++|+.++. ...|.+.+ .+|+ .++.+|.||+++..
T Consensus 194 ~~~~~~~~~~gv~~~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 249 (323)
T 3f8d_A 194 IYVETVKKKPNVEFVLNSVVKEIKGDKV-VKQVVVENLKTGEIKELNVNGVFIEIGF 249 (323)
T ss_dssp HHHHHHHTCTTEEEECSEEEEEEEESSS-EEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHHhCCCcEEEeCCEEEEEeccCc-eeEEEEEECCCCceEEEEcCEEEEEECC
Confidence 4455555544558999999999998744 34566532 2353 36899999999865
No 160
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=74.38 E-value=4.2 Score=36.21 Aligned_cols=45 Identities=16% Similarity=0.340 Sum_probs=31.7
Q ss_pred HHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 60 PEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 60 ~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
...+.+..+.+++++++|++|+. ++ |.+ .+| +++.+|.||++++.
T Consensus 224 ~~~~l~~~gV~~~~~~~v~~i~~--~~---v~~--~~g-~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 224 VASIYNQLGIKLVHNFKIKEIRE--HE---IVD--EKG-NTIPADITILLPPY 268 (409)
T ss_dssp HHHHHHHHTCEEECSCCEEEECS--SE---EEE--TTS-CEEECSEEEEECCE
T ss_pred HHHHHHHCCCEEEcCCceEEECC--Ce---EEE--CCC-CEEeeeEEEECCCC
Confidence 33333444568999999999963 32 444 567 47999999999875
No 161
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=74.37 E-value=7.7 Score=35.82 Aligned_cols=56 Identities=13% Similarity=0.142 Sum_probs=37.3
Q ss_pred cchhhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCe---EEEecCEEEEcCC
Q 021616 53 RKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL---VSLRSRSVVMTVP 111 (310)
Q Consensus 53 ~gG~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~---~~~~ad~VI~a~p 111 (310)
..-++..+....+..+.+|++|++|++|+. ++ +.+.....+|+ +++.+|.||.|+-
T Consensus 271 ~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~--~~-~~~~~~~~dg~~~~~~i~ad~viwa~G 329 (502)
T 4g6h_A 271 EKKLSSYAQSHLENTSIKVHLRTAVAKVEE--KQ-LLAKTKHEDGKITEETIPYGTLIWATG 329 (502)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEECS--SE-EEEEEECTTSCEEEEEEECSEEEECCC
T ss_pred CHHHHHHHHHHHHhcceeeecCceEEEEeC--Cc-eEEEEEecCcccceeeeccCEEEEccC
Confidence 334555555444555679999999999863 33 44444445663 4689999999874
No 162
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=74.36 E-value=6.1 Score=34.68 Aligned_cols=50 Identities=20% Similarity=0.218 Sum_probs=35.5
Q ss_pred HHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 58 MLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 58 ~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
.|.+.|.+.+ +.+|+++++|++|+. ++ .|++ .+| +++.+|.||.|+-...
T Consensus 108 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~--~v~~--~~g-~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 108 HLHDALVNRARALGVDISVNSEAVAADP--VG--RLTL--QTG-EVLEADLIVGADGVGS 160 (379)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEET--TT--EEEE--TTS-CEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC--EEEE--CCC-CEEEcCEEEECCCccH
Confidence 3444444443 458999999999987 43 5655 567 4799999999987643
No 163
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=74.34 E-value=2.6 Score=34.42 Aligned_cols=52 Identities=17% Similarity=0.116 Sum_probs=35.5
Q ss_pred HHHHHHHHHhc----cceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 58 MLPEAISKRLG----SKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 58 ~L~~~L~~~l~----~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
.+.+.|.+.+. .+++ +++|++|..++++.+.|.+ .+| +++.||.||+|+-..
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~--~~g-~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRT--WEG-PPARGEKVVLAVGSF 124 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEE--TTS-CCEECSEEEECCTTC
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEE--CCC-CEEECCEEEECCCCC
Confidence 44455555442 3566 6799999987764234554 567 479999999998874
No 164
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=73.73 E-value=3.6 Score=34.38 Aligned_cols=38 Identities=11% Similarity=0.080 Sum_probs=31.1
Q ss_pred CCCCeEEeecccCC-CchhHHHHHHHHHHHHHHHHhhhc
Q 021616 270 GYQGLFLGGNYVAG-VALGRCVESAYEVASEVSNFLSQY 307 (310)
Q Consensus 270 ~~~~l~~aG~~~~g-~gv~~ai~sG~~aA~~i~~~l~~~ 307 (310)
..++||.+||.... ..+..|+.+|+.||..|.+.+...
T Consensus 256 ~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 294 (297)
T 3fbs_A 256 TARGIFACGDVARPAGSVALAVGDGAMAGAAAHRSILFP 294 (297)
T ss_dssp SSTTEEECSGGGCTTCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEEEeecCCchHHHHHHHHhHHHHHHHHHHHHhhh
Confidence 45899999998663 447889999999999999887643
No 165
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=73.51 E-value=7.3 Score=33.77 Aligned_cols=46 Identities=7% Similarity=0.118 Sum_probs=32.8
Q ss_pred ccceeeCceeeeEEEcCCCcEEEEEECCCCe-EEEecCEEEEcCCch
Q 021616 68 GSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPSY 113 (310)
Q Consensus 68 ~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~-~~~~ad~VI~a~p~~ 113 (310)
+.+++++++|++|+..+++...|.+...+|+ +++.+|.||+++...
T Consensus 216 gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 216 TIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp SEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBC
T ss_pred ceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCC
Confidence 3589999999999987653224554323553 478999999998753
No 166
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=73.41 E-value=5 Score=37.77 Aligned_cols=51 Identities=4% Similarity=0.108 Sum_probs=34.8
Q ss_pred hhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 56 LTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 56 ~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
+........+..+.+++++++|++|+..+++ |.+ .+| +++.+|.||+++..
T Consensus 230 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~---v~~--~~g-~~i~~D~Vi~a~G~ 280 (588)
T 3ics_A 230 MAAYVHEHMKNHDVELVFEDGVDALEENGAV---VRL--KSG-SVIQTDMLILAIGV 280 (588)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEGGGTE---EEE--TTS-CEEECSEEEECSCE
T ss_pred HHHHHHHHHHHcCCEEEECCeEEEEecCCCE---EEE--CCC-CEEEcCEEEEccCC
Confidence 3333333334445689999999999876542 444 466 47999999999764
No 167
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=73.03 E-value=5.6 Score=35.97 Aligned_cols=52 Identities=10% Similarity=0.047 Sum_probs=35.8
Q ss_pred HHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 61 EAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 61 ~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
+.+.+..+.+++++++|++|+..... +.+.....+....+.||++|+||-..
T Consensus 64 ~~~~~~~~i~~~~~~~V~~id~~~~~-~~~~~~~~~~~~~~~yd~lVIATGs~ 115 (437)
T 4eqs_A 64 EKFYDRKQITVKTYHEVIAINDERQT-VSVLNRKTNEQFEESYDKLILSPGAS 115 (437)
T ss_dssp HHHHHHHCCEEEETEEEEEEETTTTE-EEEEETTTTEEEEEECSEEEECCCEE
T ss_pred HHHHHhcCCEEEeCCeEEEEEccCcE-EEEEeccCCceEEEEcCEEEECCCCc
Confidence 34555555688999999999987763 55554221222468999999998763
No 168
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=72.90 E-value=4.2 Score=34.38 Aligned_cols=39 Identities=10% Similarity=0.170 Sum_probs=31.3
Q ss_pred CCCCeEEeecccCCC--chhHHHHHHHHHHHHHHHHhhhcc
Q 021616 270 GYQGLFLGGNYVAGV--ALGRCVESAYEVASEVSNFLSQYA 308 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~--gv~~ai~sG~~aA~~i~~~l~~~~ 308 (310)
..++||.+||..... .+..|+.+|+.||..|.+.+....
T Consensus 268 ~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 308 (310)
T 1fl2_A 268 NVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLIRTK 308 (310)
T ss_dssp SSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEeecccCCcchhhhhhHhhHHHHHHHHHHHHHHhc
Confidence 358999999986543 467899999999999998876543
No 169
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=72.58 E-value=1.8 Score=38.84 Aligned_cols=32 Identities=28% Similarity=0.427 Sum_probs=26.7
Q ss_pred CCCCeEEeecc------cCCCchhHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNY------VAGVALGRCVESAYEVASEVS 301 (310)
Q Consensus 270 ~~~~l~~aG~~------~~g~gv~~ai~sG~~aA~~i~ 301 (310)
..|||||||+- +.|.++..|+.||+.|++.+.
T Consensus 362 ~~~gly~~GE~ldv~g~~GGynlq~a~~sg~~ag~~~~ 399 (401)
T 2gqf_A 362 QVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSIS 399 (401)
T ss_dssp SSTTEEECGGGBSCEECTTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEeEEeccCCCCHHHHHHHHHHHHHHHHHh
Confidence 46899999995 446778999999999998774
No 170
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=72.30 E-value=9.2 Score=32.57 Aligned_cols=55 Identities=7% Similarity=-0.047 Sum_probs=35.6
Q ss_pred HHHHHHHHhccceeeCceeeeEEEcCC--CcEEEEEEC-CCCe-EEEecCEEEEcCCch
Q 021616 59 LPEAISKRLGSKVKLSWKLSGVKKLDS--GEYSLTYET-PEGL-VSLRSRSVVMTVPSY 113 (310)
Q Consensus 59 L~~~L~~~l~~~i~~~~~V~~I~~~~~--~~~~v~~~~-~~g~-~~~~ad~VI~a~p~~ 113 (310)
+.+.+.+..+.++++++.|++|..+++ +...|.+.+ .+|+ +++.+|.||+++...
T Consensus 200 ~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 258 (333)
T 1vdc_A 200 MQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHE 258 (333)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCc
Confidence 333443333458999999999998764 322355532 2342 478999999998763
No 171
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=72.06 E-value=6.6 Score=36.28 Aligned_cols=50 Identities=12% Similarity=0.120 Sum_probs=36.0
Q ss_pred cceeeCceeeeEEEcCCC--cEEEEEECCCC----eEEEecCEEEEcCCchHHHhc
Q 021616 69 SKVKLSWKLSGVKKLDSG--EYSLTYETPEG----LVSLRSRSVVMTVPSYVASSL 118 (310)
Q Consensus 69 ~~i~~~~~V~~I~~~~~~--~~~v~~~~~~g----~~~~~ad~VI~a~p~~~~~~l 118 (310)
.+|++++.|++|..++++ .+.|.+...+| ..++.|+.||+++-.....+|
T Consensus 242 ~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~l 297 (507)
T 1coy_A 242 LTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKL 297 (507)
T ss_dssp EEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHH
T ss_pred cEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHH
Confidence 489999999999988633 34565543355 246889999999888655444
No 172
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=71.96 E-value=8.1 Score=36.15 Aligned_cols=50 Identities=12% Similarity=0.120 Sum_probs=36.4
Q ss_pred HHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 59 LPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 59 L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
+.+.+.+.+ +.++++++.|++++..+++ +.|.+ .++ .++.+|.|++|+--
T Consensus 265 i~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~-~~v~~--~~~-~~~~~D~vLvAvGR 317 (542)
T 4b1b_A 265 CAVKVKLYMEEQGVMFKNGILPKKLTKMDDK-ILVEF--SDK-TSELYDTVLYAIGR 317 (542)
T ss_dssp HHHHHHHHHHHTTCEEEETCCEEEEEEETTE-EEEEE--TTS-CEEEESEEEECSCE
T ss_pred HHHHHHHHHHhhcceeecceEEEEEEecCCe-EEEEE--cCC-CeEEEEEEEEcccc
Confidence 344444443 4589999999999998885 77776 455 36789999999743
No 173
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=71.93 E-value=7 Score=36.08 Aligned_cols=50 Identities=10% Similarity=0.255 Sum_probs=35.5
Q ss_pred cceeeCceeeeEEEcCCC--cEEEEEECCCC----eEEEecCEEEEcCCchHHHhc
Q 021616 69 SKVKLSWKLSGVKKLDSG--EYSLTYETPEG----LVSLRSRSVVMTVPSYVASSL 118 (310)
Q Consensus 69 ~~i~~~~~V~~I~~~~~~--~~~v~~~~~~g----~~~~~ad~VI~a~p~~~~~~l 118 (310)
.+|++++.|++|..++++ .+.|.+.+.+| ..++.|+.||+|+-......|
T Consensus 237 ~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~l 292 (504)
T 1n4w_A 237 VTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTEL 292 (504)
T ss_dssp EEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHH
T ss_pred cEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHH
Confidence 489999999999988632 24455543355 246889999999887655443
No 174
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=71.81 E-value=6.1 Score=36.83 Aligned_cols=51 Identities=10% Similarity=0.232 Sum_probs=36.2
Q ss_pred HHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCe-EEEecCEEEEcCCc
Q 021616 60 PEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPS 112 (310)
Q Consensus 60 ~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~-~~~~ad~VI~a~p~ 112 (310)
.+.+.+..+.+++++++|++|+..++. +.+.. ..+|+ .++.+|+||+||-.
T Consensus 64 ~~~~~~~~~i~~~~~~~V~~id~~~~~-v~~~~-~~~g~~~~~~~d~lviAtG~ 115 (565)
T 3ntd_A 64 PESFKARFNVEVRVKHEVVAIDRAAKL-VTVRR-LLDGSEYQESYDTLLLSPGA 115 (565)
T ss_dssp HHHHHHHHCCEEETTEEEEEEETTTTE-EEEEE-TTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHhcCcEEEECCEEEEEECCCCE-EEEEe-cCCCCeEEEECCEEEECCCC
Confidence 345555556688999999999987763 66553 12332 36899999999865
No 175
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=71.48 E-value=4.4 Score=37.11 Aligned_cols=54 Identities=11% Similarity=0.036 Sum_probs=35.7
Q ss_pred HHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 58 MLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 58 ~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
.|.+.|.+.+ +.+|+.+++| +|..+++....+.+.+.+| .+.+|.||+|+-...
T Consensus 120 ~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g--~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 120 EIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGL--VEDVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEE--ECCCSEEEECCCCCG
T ss_pred HHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCC--eEEeeeEEECCCCCc
Confidence 4555555443 4589999999 9987765322344423344 477999999987754
No 176
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=71.41 E-value=12 Score=34.30 Aligned_cols=60 Identities=7% Similarity=-0.014 Sum_probs=41.2
Q ss_pred eeeccchhhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 49 VGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 49 ~~~~~gG~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
+.-+-+|...+-+.| +..+.+|++++.|++|..+++ ...|.. .+| +++.+|.||+++...
T Consensus 253 vvViGgG~~gle~~l-~~~GV~v~~~~~v~~i~~~~~-v~~v~~--~~g-~~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 253 VAVTGSKADEVIQEL-ERWGIDYVHIPNVKRVEGNEK-VERVID--MNN-HEYKVDALIFADGRR 312 (493)
T ss_dssp EEEESTTHHHHHHHH-HHHTCEEEECSSEEEEECSSS-CCEEEE--TTC-CEEECSEEEECCCEE
T ss_pred EEEECCCHHHHHHHH-HhCCcEEEeCCeeEEEecCCc-eEEEEe--CCC-eEEEeCEEEECCCcC
Confidence 444445555554444 445679999999999986544 345554 567 479999999998764
No 177
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=71.28 E-value=13 Score=31.39 Aligned_cols=53 Identities=9% Similarity=0.096 Sum_probs=35.0
Q ss_pred HHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEEC-CCCe-EEEecCEEEEcCCc
Q 021616 59 LPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYET-PEGL-VSLRSRSVVMTVPS 112 (310)
Q Consensus 59 L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~-~~g~-~~~~ad~VI~a~p~ 112 (310)
+.+.|. ..+.+++++++|++|..+++....|.+.. .+|+ +++.+|.||+++..
T Consensus 196 l~~~l~-~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 196 YVQEIK-KRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp HHHHHH-HTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCE
T ss_pred HHHHHh-cCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCC
Confidence 444444 33558999999999998754222455432 2553 36899999998864
No 178
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=70.85 E-value=10 Score=35.80 Aligned_cols=58 Identities=16% Similarity=0.144 Sum_probs=39.2
Q ss_pred hHHHHHHHHHh---ccceeeCceeeeEEEc-CCCcEEEEEE-CCCCe-EEEecCEEEEcCCchH
Q 021616 57 TMLPEAISKRL---GSKVKLSWKLSGVKKL-DSGEYSLTYE-TPEGL-VSLRSRSVVMTVPSYV 114 (310)
Q Consensus 57 ~~L~~~L~~~l---~~~i~~~~~V~~I~~~-~~~~~~v~~~-~~~g~-~~~~ad~VI~a~p~~~ 114 (310)
..+.+.|.+.+ +.+|+++++|++|..+ ++..+.|.+. +.+|+ ..+.||.||+|+-...
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 35666666554 4589999999999986 4432334432 24553 3689999999988744
No 179
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=70.65 E-value=4.6 Score=34.36 Aligned_cols=37 Identities=14% Similarity=0.257 Sum_probs=30.3
Q ss_pred CCCCeEEeecccCC--CchhHHHHHHHHHHHHHHHHhhh
Q 021616 270 GYQGLFLGGNYVAG--VALGRCVESAYEVASEVSNFLSQ 306 (310)
Q Consensus 270 ~~~~l~~aG~~~~g--~gv~~ai~sG~~aA~~i~~~l~~ 306 (310)
..++||.+||...+ .....|+.+|+.||..|.+.+..
T Consensus 279 ~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 317 (319)
T 3cty_A 279 SVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLYSDSIS 317 (319)
T ss_dssp SSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEeecccCcchhhHHHHHHHHHHHHHHHHHHhhc
Confidence 35899999998654 34678999999999999988754
No 180
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=69.74 E-value=5 Score=33.82 Aligned_cols=38 Identities=13% Similarity=0.178 Sum_probs=30.9
Q ss_pred CCCCeEEeecccC-C-CchhHHHHHHHHHHHHHHHHhhhc
Q 021616 270 GYQGLFLGGNYVA-G-VALGRCVESAYEVASEVSNFLSQY 307 (310)
Q Consensus 270 ~~~~l~~aG~~~~-g-~gv~~ai~sG~~aA~~i~~~l~~~ 307 (310)
..++||.+||... + ..+..|+.+|+.||..|.+.+...
T Consensus 275 ~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 314 (315)
T 3r9u_A 275 SVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAMAYIESL 314 (315)
T ss_dssp SSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEeecccCCchhhhhhHHhhHHHHHHHHHHHHHhc
Confidence 4589999999853 3 347889999999999999888653
No 181
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=69.28 E-value=6.1 Score=35.57 Aligned_cols=51 Identities=6% Similarity=-0.012 Sum_probs=34.6
Q ss_pred hHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCC-eEEEecCEEEEcCCc
Q 021616 57 TMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEG-LVSLRSRSVVMTVPS 112 (310)
Q Consensus 57 ~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g-~~~~~ad~VI~a~p~ 112 (310)
..+++.+.+..+.++++|+.|++|+. ++ +.+. +.+| .+++.+|.||++++.
T Consensus 203 ~~~l~~~l~~~GV~~~~~~~v~~v~~--~~-~~~~--~~~g~~~~i~~d~vi~~~G~ 254 (430)
T 3hyw_A 203 KRLVEDLFAERNIDWIANVAVKAIEP--DK-VIYE--DLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEECS--SE-EEEE--CTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHhCCeEEEeCceEEEEeC--Cc-eEEE--eeCCCceEeecceEEEeccC
Confidence 44555555555679999999999853 32 4443 3343 257999999999764
No 182
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=69.22 E-value=6.4 Score=30.27 Aligned_cols=38 Identities=16% Similarity=0.049 Sum_probs=30.2
Q ss_pred CCCCeEEeecccCCC--chhHHHHHHHHHHHHHHHHhhhc
Q 021616 270 GYQGLFLGGNYVAGV--ALGRCVESAYEVASEVSNFLSQY 307 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~--gv~~ai~sG~~aA~~i~~~l~~~ 307 (310)
..++||.+||-.... ....|+.+|..+|..|...+...
T Consensus 134 ~~~~i~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~ 173 (180)
T 2ywl_A 134 SYPRVYAAGVARGKVPGHAIISAGDGAYVAVHLVSDLRGE 173 (180)
T ss_dssp SSTTEEECGGGGTCCSCCHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEeecccCcchhhHHHHHHhHHHHHHHHHHHhhhc
Confidence 358999999986533 45789999999999998877544
No 183
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=68.10 E-value=5.5 Score=33.75 Aligned_cols=37 Identities=14% Similarity=0.226 Sum_probs=30.3
Q ss_pred CCCCeEEeecccCC--CchhHHHHHHHHHHHHHHHHhhh
Q 021616 270 GYQGLFLGGNYVAG--VALGRCVESAYEVASEVSNFLSQ 306 (310)
Q Consensus 270 ~~~~l~~aG~~~~g--~gv~~ai~sG~~aA~~i~~~l~~ 306 (310)
..++||.+||.... .....|+.+|..||..|.+.|..
T Consensus 277 ~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 315 (320)
T 1trb_A 277 SIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDG 315 (320)
T ss_dssp SSTTEEECGGGGCSSSCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEcccccCCcchhhhhhhccHHHHHHHHHHHHHh
Confidence 45899999998653 24678999999999999988854
No 184
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=67.97 E-value=5.7 Score=33.92 Aligned_cols=50 Identities=12% Similarity=0.218 Sum_probs=36.5
Q ss_pred HHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 58 MLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 58 ~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
.+.+.|.+.+ +.++++++ |..|+..+++ |.|++ +| .++.+|+||+|+-..
T Consensus 71 ~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~-~~v~~---~~-~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 71 ELTDKFRKQSERFGTTIFTET-VTKVDFSSKP-FKLFT---DS-KAILADAVILAIGAV 123 (333)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-CCEEECSSSS-EEEEC---SS-EEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCE-EEEEE---CC-cEEEcCEEEECCCCC
Confidence 4555554443 35788887 9999987775 88764 56 479999999998764
No 185
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=67.90 E-value=8.7 Score=32.92 Aligned_cols=54 Identities=9% Similarity=0.059 Sum_probs=35.4
Q ss_pred HHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEEC-CCCe-EEEecCEEEEcCCch
Q 021616 59 LPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYET-PEGL-VSLRSRSVVMTVPSY 113 (310)
Q Consensus 59 L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~-~~g~-~~~~ad~VI~a~p~~ 113 (310)
+.+.+.+..+.+++++++|++|+.+++ ...|.+.. .+|+ +++.+|.||+++...
T Consensus 196 ~~~~~~~~~gV~v~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2a87_A 196 MLDRARNNDKIRFLTNHTVVAVDGDTT-VTGLRVRDTNTGAETTLPVTGVFVAIGHE 251 (335)
T ss_dssp HHHHHHHCTTEEEECSEEEEEEECSSS-CCEEEEEEETTSCCEEECCSCEEECSCEE
T ss_pred HHHHHhccCCcEEEeCceeEEEecCCc-EeEEEEEEcCCCceEEeecCEEEEccCCc
Confidence 444554444568999999999987653 23344421 2342 478999999998753
No 186
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=67.60 E-value=10 Score=34.12 Aligned_cols=42 Identities=7% Similarity=-0.061 Sum_probs=30.8
Q ss_pred hccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 67 LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 67 l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
.+.+++++++|++|+.+ ++.+.+.. +| .++.+|.||+++...
T Consensus 204 ~gv~i~~~~~v~~i~~~-~~v~~v~~---~~-~~i~~d~vi~a~G~~ 245 (447)
T 1nhp_A 204 NNITIATGETVERYEGD-GRVQKVVT---DK-NAYDADLVVVAVGVR 245 (447)
T ss_dssp TTEEEEESCCEEEEECS-SBCCEEEE---SS-CEEECSEEEECSCEE
T ss_pred CCCEEEcCCEEEEEEcc-CcEEEEEE---CC-CEEECCEEEECcCCC
Confidence 34589999999999876 33234554 34 368999999998764
No 187
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=67.55 E-value=6.6 Score=36.64 Aligned_cols=56 Identities=7% Similarity=-0.104 Sum_probs=35.6
Q ss_pred HHHHHHHHhccceeeCceeeeEEEc-CC------CcEEEEEEC-CCCe-EEEecCEEEEcCCchH
Q 021616 59 LPEAISKRLGSKVKLSWKLSGVKKL-DS------GEYSLTYET-PEGL-VSLRSRSVVMTVPSYV 114 (310)
Q Consensus 59 L~~~L~~~l~~~i~~~~~V~~I~~~-~~------~~~~v~~~~-~~g~-~~~~ad~VI~a~p~~~ 114 (310)
|.+.+.+..+.+|++++.|++|..+ ++ ..+.|.+.+ .+|+ .++.||.||+|+-...
T Consensus 144 L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 144 LVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp CHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 3344333234589999999999983 33 323354432 3563 3689999999987744
No 188
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=67.36 E-value=5.6 Score=36.29 Aligned_cols=37 Identities=16% Similarity=0.412 Sum_probs=31.0
Q ss_pred CCCCeEEeecccCCCc-hhHHHHHHHHHHHHHHHHhhh
Q 021616 270 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSNFLSQ 306 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g-v~~ai~sG~~aA~~i~~~l~~ 306 (310)
..++||.+||...+.. +..|+.+|+.||..|...|..
T Consensus 408 s~~~VfA~GD~~~g~~~v~~A~~~G~~aA~~i~~~L~~ 445 (456)
T 2vdc_G 408 NMDGVFAAGDIVRGASLVVWAIRDGRDAAEGIHAYAKA 445 (456)
T ss_dssp SSTTEEECGGGGSSCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeccccCCchHHHHHHHHHHHHHHHHHHHhhc
Confidence 4589999999876544 688999999999999988754
No 189
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=67.30 E-value=5.6 Score=33.70 Aligned_cols=37 Identities=14% Similarity=0.345 Sum_probs=29.1
Q ss_pred CCCCeEEeecccC-CC-chhHHHHHHHHHHHHHHHHhhh
Q 021616 270 GYQGLFLGGNYVA-GV-ALGRCVESAYEVASEVSNFLSQ 306 (310)
Q Consensus 270 ~~~~l~~aG~~~~-g~-gv~~ai~sG~~aA~~i~~~l~~ 306 (310)
..|+||.+||-.. +. -+..|+.+|+.||..|.+.|..
T Consensus 269 s~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~~ 307 (312)
T 4gcm_A 269 SVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIEH 307 (312)
T ss_dssp SSTTEEECSTTBSCSCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeecCCCcchHHHHHHHHHHHHHHHHHHHHHh
Confidence 4689999999764 33 3578999999999999777643
No 190
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=67.24 E-value=8.7 Score=35.58 Aligned_cols=53 Identities=19% Similarity=0.218 Sum_probs=37.5
Q ss_pred HHHHHHHHHh---ccceeeCceeeeEEEcC--CCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 58 MLPEAISKRL---GSKVKLSWKLSGVKKLD--SGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 58 ~L~~~L~~~l---~~~i~~~~~V~~I~~~~--~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
.+.+.|.+.+ +.+++.+++|++|+... ++.+.|++ .+| +++.+|+||+|+-..
T Consensus 268 ~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~--~~g-~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 268 KLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIET--ASG-AVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEE--TTS-CEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEE--CCC-CEEEcCEEEECCCCC
Confidence 3555554443 45899999999998652 22377776 567 479999999998763
No 191
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=67.24 E-value=9.4 Score=36.36 Aligned_cols=58 Identities=10% Similarity=0.065 Sum_probs=40.4
Q ss_pred hHHHHHHHHHhc---cceeeCceeeeEEEcCCCcEEEEEEC-CCCe-EEEecCEEEEcCCchH
Q 021616 57 TMLPEAISKRLG---SKVKLSWKLSGVKKLDSGEYSLTYET-PEGL-VSLRSRSVVMTVPSYV 114 (310)
Q Consensus 57 ~~L~~~L~~~l~---~~i~~~~~V~~I~~~~~~~~~v~~~~-~~g~-~~~~ad~VI~a~p~~~ 114 (310)
..|...|.+.+. .+|+.++.|.+|..+++....|.+.+ .+|+ ..+.|+.||+|+-...
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 357778877653 58999999999987655322344322 4553 3689999999987754
No 192
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=66.92 E-value=8.4 Score=36.76 Aligned_cols=53 Identities=13% Similarity=0.159 Sum_probs=36.4
Q ss_pred HHHHHHHHHh----ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 58 MLPEAISKRL----GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 58 ~L~~~L~~~l----~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
.+.+.|.+.+ +.+| +++.|+.|..+++..+.|.+ .+| ..+.||.||+|+-...
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t--~dG-~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRT--NLG-VEYKTKAVVVTTGTFL 180 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEE--TTS-CEEECSEEEECCTTCB
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEE--CCC-cEEEeCEEEEccCCCc
Confidence 3455555444 2366 67899999887764234654 577 4799999999987643
No 193
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=66.60 E-value=8.9 Score=33.18 Aligned_cols=42 Identities=5% Similarity=0.197 Sum_probs=30.9
Q ss_pred cceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 69 SKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 69 ~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
.++++++.|.+|+..+++ +.|.+ .+|+....+|.||+++...
T Consensus 230 v~~~~~~~v~~i~~~~~~-~~v~~--~~g~~~~~~d~vi~a~G~~ 271 (369)
T 3d1c_A 230 IEMNVHYTVKDIDFNNGQ-YHISF--DSGQSVHTPHEPILATGFD 271 (369)
T ss_dssp EEEECSCCEEEEEEETTE-EEEEE--SSSCCEEESSCCEECCCBC
T ss_pred EEEecCcEEEEEEecCCc-eEEEe--cCCeEeccCCceEEeeccC
Confidence 589999999999876664 66765 5674333569999998653
No 194
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=66.22 E-value=10 Score=32.49 Aligned_cols=37 Identities=19% Similarity=0.320 Sum_probs=29.3
Q ss_pred CCCCeEEeecccCC--CchhHHHHHHHHHHHHHHHHhhh
Q 021616 270 GYQGLFLGGNYVAG--VALGRCVESAYEVASEVSNFLSQ 306 (310)
Q Consensus 270 ~~~~l~~aG~~~~g--~gv~~ai~sG~~aA~~i~~~l~~ 306 (310)
..++||.+||.... .....|+.+|+.||..|.+.+..
T Consensus 279 ~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~~~l~~ 317 (335)
T 2a87_A 279 SLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAERWLAE 317 (335)
T ss_dssp SSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeeecCCccHHHHHHHHHhHHHHHHHHHHHhhc
Confidence 46899999998653 23677899999999999887654
No 195
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=66.14 E-value=12 Score=34.32 Aligned_cols=42 Identities=10% Similarity=0.066 Sum_probs=30.5
Q ss_pred hccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 67 LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 67 l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
.+.+|+++++|++|+. +++...|.. +| +++.+|.||+++...
T Consensus 249 ~GV~i~~~~~v~~i~~-~~~v~~v~~---~g-~~i~~D~Vi~a~G~~ 290 (490)
T 2bc0_A 249 HGIQLAFGETVKEVAG-NGKVEKIIT---DK-NEYDVDMVILAVGFR 290 (490)
T ss_dssp TTCEEEETCCEEEEEC-SSSCCEEEE---SS-CEEECSEEEECCCEE
T ss_pred CCeEEEeCCEEEEEEc-CCcEEEEEE---CC-cEEECCEEEECCCCC
Confidence 3468999999999986 333223554 45 478999999998653
No 196
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=65.73 E-value=10 Score=35.61 Aligned_cols=51 Identities=10% Similarity=0.157 Sum_probs=36.7
Q ss_pred HHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCe-EEEecCEEEEcCCc
Q 021616 60 PEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPS 112 (310)
Q Consensus 60 ~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~-~~~~ad~VI~a~p~ 112 (310)
.+.+.+..+.++++++.|++|+..++. +.+.. ..+|+ ..+.+|+||+|+-.
T Consensus 99 ~~~~~~~~gi~v~~~~~V~~id~~~~~-v~v~~-~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 99 VERMSKRFNLDIRVLSEVVKINKEEKT-ITIKN-VTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp HHHHHHHTTCEEECSEEEEEEETTTTE-EEEEE-TTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHhcCcEEEECCEEEEEECCCCE-EEEee-cCCCCEEEEeCCEEEECCCC
Confidence 345555566689999999999987773 66653 23442 36899999999875
No 197
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=65.69 E-value=13 Score=34.37 Aligned_cols=47 Identities=11% Similarity=0.185 Sum_probs=31.5
Q ss_pred hccceeeCceeeeEEEcCC---CcEEEEEECCCCe--EEEecCEEEEcCCch
Q 021616 67 LGSKVKLSWKLSGVKKLDS---GEYSLTYETPEGL--VSLRSRSVVMTVPSY 113 (310)
Q Consensus 67 l~~~i~~~~~V~~I~~~~~---~~~~v~~~~~~g~--~~~~ad~VI~a~p~~ 113 (310)
.+.+|++++.|++|...++ +.+.+++...+|. ..+.+|.||+++...
T Consensus 263 ~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~ 314 (519)
T 3qfa_A 263 HGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRD 314 (519)
T ss_dssp TTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEE
T ss_pred CCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCc
Confidence 3458999999888876432 2355655334442 256899999998764
No 198
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=65.03 E-value=19 Score=32.29 Aligned_cols=52 Identities=15% Similarity=0.066 Sum_probs=33.2
Q ss_pred hHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCC----eEEEecCEEEEcCC
Q 021616 57 TMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEG----LVSLRSRSVVMTVP 111 (310)
Q Consensus 57 ~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g----~~~~~ad~VI~a~p 111 (310)
....+...+..+.++++++.|++|+. ++ +.+...+.+| .+++.+|.||++++
T Consensus 211 ~~~~~~~l~~~gI~~~~~~~v~~v~~--~~-v~~~~~~~~g~~~~~~~i~~D~vv~~~g 266 (437)
T 3sx6_A 211 KGILTKGLKEEGIEAYTNCKVTKVED--NK-MYVTQVDEKGETIKEMVLPVKFGMMIPA 266 (437)
T ss_dssp HHHHHHHHHHTTCEEECSEEEEEEET--TE-EEEEEECTTSCEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHCCCEEEcCCEEEEEEC--Ce-EEEEecccCCccccceEEEEeEEEEcCC
Confidence 33333333444568999999999963 33 4444323343 25789999999965
No 199
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=64.92 E-value=15 Score=33.51 Aligned_cols=43 Identities=7% Similarity=0.005 Sum_probs=30.8
Q ss_pred HhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 66 RLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 66 ~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
..+.+++++++|++|+.++ +.+.+.. + + .++.+|.||+++...
T Consensus 239 ~~Gv~i~~~~~v~~i~~~~-~v~~v~~--~-~-~~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 239 KHHIEILTNENVKAFKGNE-RVEAVET--D-K-GTYKADLVLVSVGVK 281 (480)
T ss_dssp HTTCEEECSCCEEEEEESS-BEEEEEE--T-T-EEEECSEEEECSCEE
T ss_pred HcCcEEEcCCEEEEEEcCC-cEEEEEE--C-C-CEEEcCEEEECcCCC
Confidence 3356899999999998753 2234443 3 3 378999999998764
No 200
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=64.12 E-value=13 Score=35.77 Aligned_cols=45 Identities=16% Similarity=0.123 Sum_probs=31.0
Q ss_pred HHhccceeeCceeeeEEEcCCCcEEEEEE-CCCCeEEEecCEEEEcCCch
Q 021616 65 KRLGSKVKLSWKLSGVKKLDSGEYSLTYE-TPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 65 ~~l~~~i~~~~~V~~I~~~~~~~~~v~~~-~~~g~~~~~ad~VI~a~p~~ 113 (310)
+..+.+|+++++|++|+. ++ ..+... +.++ +++.+|.||+++...
T Consensus 578 ~~~GV~i~~~~~V~~i~~--~~-~~v~~~~~~~~-~~i~aD~VV~A~G~~ 623 (690)
T 3k30_A 578 IENGVARVTDHAVVAVGA--GG-VTVRDTYASIE-RELECDAVVMVTARL 623 (690)
T ss_dssp HHTTCEEEESEEEEEEET--TE-EEEEETTTCCE-EEEECSEEEEESCEE
T ss_pred HHCCCEEEcCcEEEEEEC--Ce-EEEEEccCCeE-EEEECCEEEECCCCC
Confidence 334568999999999974 32 444432 2234 579999999998663
No 201
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=63.75 E-value=19 Score=34.55 Aligned_cols=57 Identities=11% Similarity=0.154 Sum_probs=38.9
Q ss_pred HHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEE-ECCCCe-EEEecCEEEEcCCchH
Q 021616 58 MLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTY-ETPEGL-VSLRSRSVVMTVPSYV 114 (310)
Q Consensus 58 ~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~-~~~~g~-~~~~ad~VI~a~p~~~ 114 (310)
.|...|.+.+ +.+|+.++.|.+|...++....|.+ ++.+|+ ..+.||.||+|+-...
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 5667776554 4589999999999876552223433 234563 2589999999987754
No 202
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=63.67 E-value=20 Score=30.36 Aligned_cols=55 Identities=11% Similarity=-0.007 Sum_probs=36.6
Q ss_pred HHHHHHHHHh---ccceeeCceeeeEEEcCCCcEEEEEECC-CCe-EEEecCEEEEcCCch
Q 021616 58 MLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETP-EGL-VSLRSRSVVMTVPSY 113 (310)
Q Consensus 58 ~L~~~L~~~l---~~~i~~~~~V~~I~~~~~~~~~v~~~~~-~g~-~~~~ad~VI~a~p~~ 113 (310)
.+.+.|.+.+ +.++++++.|.+|+.+++ ...|.+... +|+ +++.+|.||+++...
T Consensus 192 ~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2zbw_A 192 ASVKELMKAHEEGRLEVLTPYELRRVEGDER-VRWAVVFHNQTQEELALEVDAVLILAGYI 251 (335)
T ss_dssp HHHHHHHHHHHTTSSEEETTEEEEEEEESSS-EEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHHHhccccCCeEEecCCcceeEccCCC-eeEEEEEECCCCceEEEecCEEEEeecCC
Confidence 3445555543 458999999999998433 235555321 452 478999999998764
No 203
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=63.56 E-value=9.6 Score=36.48 Aligned_cols=52 Identities=15% Similarity=0.272 Sum_probs=35.8
Q ss_pred HHHHHHHHh----ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchH
Q 021616 59 LPEAISKRL----GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 114 (310)
Q Consensus 59 L~~~L~~~l----~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~ 114 (310)
+.+.|.+.+ +.+| +++.|+.|..+++..+.|.+ .+| .++.||.||+|+-...
T Consensus 126 ~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t--~dG-~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 126 YRQAVRTALENQPNLMI-FQQAVEDLIVENDRVVGAVT--QMG-LKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEE--TTS-EEEEEEEEEECCSTTT
T ss_pred HHHHHHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEE--CCC-CEEECCEEEEcCCCCc
Confidence 444444443 3367 67899999887764235654 577 5799999999987653
No 204
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=63.29 E-value=15 Score=34.78 Aligned_cols=58 Identities=16% Similarity=0.030 Sum_probs=39.9
Q ss_pred hHHHHHHHHHh---c-cceeeCceeeeEEEcCCCcEEEEE-ECCCCe-EEEecCEEEEcCCchH
Q 021616 57 TMLPEAISKRL---G-SKVKLSWKLSGVKKLDSGEYSLTY-ETPEGL-VSLRSRSVVMTVPSYV 114 (310)
Q Consensus 57 ~~L~~~L~~~l---~-~~i~~~~~V~~I~~~~~~~~~v~~-~~~~g~-~~~~ad~VI~a~p~~~ 114 (310)
..|...|.+.+ + .+|++++.|++|..+++..+.|.+ +..+|+ ..+.||.||+|+-...
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCc
Confidence 35777777665 3 479999999999987653223332 235663 2689999999987744
No 205
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=62.89 E-value=8.5 Score=35.01 Aligned_cols=48 Identities=8% Similarity=0.113 Sum_probs=31.0
Q ss_pred HHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCe-EEEecCEEEEcCCc
Q 021616 63 ISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPS 112 (310)
Q Consensus 63 L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~-~~~~ad~VI~a~p~ 112 (310)
+.+..+.+++++++|++|+..++. +.+.. ..+|+ ..+.+|++|+|+-.
T Consensus 75 ~~~~~gi~~~~~~~V~~id~~~~~-v~~~~-~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 75 FRINKDVEALVETRAHAIDRAAHT-VEIEN-LRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp ------CEEECSEEEEEEETTTTE-EEEEE-TTTCCEEEEECSEEEECCCE
T ss_pred HhhhcCcEEEECCEEEEEECCCCE-EEEee-cCCCCEEEEECCEEEEeCCC
Confidence 333344578899999999987763 66553 12342 36899999999865
No 206
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=62.80 E-value=3.5 Score=37.19 Aligned_cols=30 Identities=17% Similarity=0.374 Sum_probs=24.3
Q ss_pred CCCCeEEeecc------cCCCchhHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNY------VAGVALGRCVESAYEVASE 299 (310)
Q Consensus 270 ~~~~l~~aG~~------~~g~gv~~ai~sG~~aA~~ 299 (310)
..+||||||+- +.|..+.-|..||+.|++.
T Consensus 381 ~~~gLy~aGE~lD~~~~~GGynlq~a~stG~~ag~~ 416 (417)
T 3v76_A 381 EVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQD 416 (417)
T ss_dssp TSTTEEECGGGBSEEECSSSHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEeEecccCCCCHHHHHHHHHHHHHhCc
Confidence 46899999963 5577789999999988764
No 207
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=62.15 E-value=14 Score=31.17 Aligned_cols=53 Identities=11% Similarity=-0.021 Sum_probs=36.1
Q ss_pred HHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEEC-CCC-eEEEecCEEEEcCCch
Q 021616 59 LPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYET-PEG-LVSLRSRSVVMTVPSY 113 (310)
Q Consensus 59 L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~-~~g-~~~~~ad~VI~a~p~~ 113 (310)
..+.| +..+.+++++++|.+|..+++. ..|++.+ .+| .+++.+|.||+++...
T Consensus 195 ~~~~l-~~~gv~~~~~~~v~~i~~~~~~-~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 249 (332)
T 3lzw_A 195 SVENL-HASKVNVLTPFVPAELIGEDKI-EQLVLEEVKGDRKEILEIDDLIVNYGFV 249 (332)
T ss_dssp HHHHH-HHSSCEEETTEEEEEEECSSSC-CEEEEEETTSCCEEEEECSEEEECCCEE
T ss_pred HHHHH-hcCCeEEEeCceeeEEecCCce-EEEEEEecCCCceEEEECCEEEEeeccC
Confidence 33444 2335689999999999987663 5666643 222 2468999999998753
No 208
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=61.92 E-value=10 Score=33.96 Aligned_cols=45 Identities=0% Similarity=-0.144 Sum_probs=29.3
Q ss_pred HHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 64 SKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 64 ~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
.+..+.++++++.|++|+. ++ +.+.....+| +++.+|.||++++.
T Consensus 210 l~~~GV~i~~~~~v~~v~~--~~-v~~~~~~~~g-~~i~~D~vv~a~G~ 254 (430)
T 3h28_A 210 FAERNIDWIANVAVKAIEP--DK-VIYEDLNGNT-HEVPAKFTMFMPSF 254 (430)
T ss_dssp HHHTTCEEECSCEEEEECS--SE-EEEECTTSCE-EEEECSEEEEECEE
T ss_pred HHHCCCEEEeCCEEEEEeC--Ce-EEEEecCCCc-eEEeeeEEEECCCC
Confidence 3444568999999999953 32 4443101124 57999999998654
No 209
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=61.12 E-value=11 Score=33.99 Aligned_cols=44 Identities=9% Similarity=0.049 Sum_probs=33.2
Q ss_pred HhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 66 RLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 66 ~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
..+.+++++++|++|+..++. +.+.. ..++ +.+.+|++|+|+-.
T Consensus 70 ~~gi~~~~~~~V~~id~~~~~-v~v~~-~~~~-~~~~~d~lviAtG~ 113 (452)
T 3oc4_A 70 RQKIQLLLNREVVAMDVENQL-IAWTR-KEEQ-QWYSYDKLILATGA 113 (452)
T ss_dssp HTTEEEECSCEEEEEETTTTE-EEEEE-TTEE-EEEECSEEEECCCC
T ss_pred HCCCEEEECCEEEEEECCCCE-EEEEe-cCce-EEEEcCEEEECCCc
Confidence 344578899999999988774 77652 2344 57999999999865
No 210
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=61.08 E-value=9.4 Score=32.44 Aligned_cols=37 Identities=19% Similarity=0.142 Sum_probs=30.1
Q ss_pred CCCCeEEeecccCC--CchhHHHHHHHHHHHHHHHHhhh
Q 021616 270 GYQGLFLGGNYVAG--VALGRCVESAYEVASEVSNFLSQ 306 (310)
Q Consensus 270 ~~~~l~~aG~~~~g--~gv~~ai~sG~~aA~~i~~~l~~ 306 (310)
..++||.+||.... .....|+.+|+.||..|...+..
T Consensus 275 ~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 313 (325)
T 2q7v_A 275 NIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTERQLAA 313 (325)
T ss_dssp SSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35899999998653 34678999999999999987754
No 211
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=60.46 E-value=5.8 Score=37.22 Aligned_cols=38 Identities=13% Similarity=0.138 Sum_probs=31.0
Q ss_pred CCCCeEEeecccC-CCchhHHHHHHHHHHHHHHHHhhhc
Q 021616 270 GYQGLFLGGNYVA-GVALGRCVESAYEVASEVSNFLSQY 307 (310)
Q Consensus 270 ~~~~l~~aG~~~~-g~gv~~ai~sG~~aA~~i~~~l~~~ 307 (310)
..+|||.|||... ..|+-.|..+|..+|+.|++.+...
T Consensus 507 ~~~gly~~GegaG~a~gi~~Aa~~G~~~a~~i~~~~~~~ 545 (549)
T 3nlc_A 507 NLKGFYPAGEGAGYAGGILSAGIDGIKVAEAVARDIVAA 545 (549)
T ss_dssp TCBTEEECHHHHTSCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEccccCChhhHHHHHHHHHHHHHHHHHHHhhhc
Confidence 3578999999754 3568999999999999999887643
No 212
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=58.91 E-value=8.6 Score=32.88 Aligned_cols=37 Identities=16% Similarity=0.273 Sum_probs=28.8
Q ss_pred CCCCeEEee--cccC-C-CchhHHHHHHHHHHHHHHHHhhh
Q 021616 270 GYQGLFLGG--NYVA-G-VALGRCVESAYEVASEVSNFLSQ 306 (310)
Q Consensus 270 ~~~~l~~aG--~~~~-g-~gv~~ai~sG~~aA~~i~~~l~~ 306 (310)
..++||.+| |... + ..+..|+.+|+.+|..|.+.+..
T Consensus 313 ~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 313 AVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp SCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred CCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHHHHh
Confidence 468999999 4443 2 34678999999999999988764
No 213
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=57.30 E-value=7.5 Score=33.78 Aligned_cols=36 Identities=19% Similarity=0.396 Sum_probs=28.9
Q ss_pred CCCCeEEeeccc--------CCCchhHHHHHHHHHHHHHHHHhh
Q 021616 270 GYQGLFLGGNYV--------AGVALGRCVESAYEVASEVSNFLS 305 (310)
Q Consensus 270 ~~~~l~~aG~~~--------~g~gv~~ai~sG~~aA~~i~~~l~ 305 (310)
.+|+||++|... .|+-..+-+.||+.||+.|++.|+
T Consensus 282 ~~~~~~~~g~~~~~~~~~~r~g~~fg~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 282 GVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp TSTTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCEEECChHHHHhcCCCCCChhhhhhhhhhHHHHHHHHHHhh
Confidence 368999999852 144467789999999999999885
No 214
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=57.03 E-value=6.7 Score=33.19 Aligned_cols=38 Identities=13% Similarity=0.231 Sum_probs=29.8
Q ss_pred CCCCeEEeecccC-CC-chhHHHHHHHHHHHHHHHHhhhc
Q 021616 270 GYQGLFLGGNYVA-GV-ALGRCVESAYEVASEVSNFLSQY 307 (310)
Q Consensus 270 ~~~~l~~aG~~~~-g~-gv~~ai~sG~~aA~~i~~~l~~~ 307 (310)
..|+||.|||-.. +. .+..|+.+|+.||..|.+.|...
T Consensus 263 s~p~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~~e 302 (304)
T 4fk1_A 263 SEKNIYLAGETTTQGPSSLIIAASQGNKAAIAINSDITDE 302 (304)
T ss_dssp SSTTEEECSHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeccCCCcchHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4689999999653 32 26778999999999998887653
No 215
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=56.92 E-value=15 Score=33.25 Aligned_cols=42 Identities=19% Similarity=0.281 Sum_probs=30.7
Q ss_pred hccceeeCceeeeEEEcCCCcEEEEEECCCCe-EEEecCEEEEcCCch
Q 021616 67 LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPSY 113 (310)
Q Consensus 67 l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~-~~~~ad~VI~a~p~~ 113 (310)
.+.+++++++|++|+. ++ +.+. ..+|+ +++.+|.||+++...
T Consensus 225 ~gv~i~~~~~v~~i~~--~~-v~v~--~~~G~~~~i~~D~vv~a~G~~ 267 (458)
T 1lvl_A 225 LGIALHLGHSVEGYEN--GC-LLAN--DGKGGQLRLEADRVLVAVGRR 267 (458)
T ss_dssp HTCEEETTCEEEEEET--TE-EEEE--CSSSCCCEECCSCEEECCCEE
T ss_pred CCCEEEECCEEEEEEe--CC-EEEE--ECCCceEEEECCEEEECcCCC
Confidence 3568999999999986 43 5554 24452 468999999998763
No 216
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=56.62 E-value=16 Score=32.38 Aligned_cols=42 Identities=10% Similarity=0.195 Sum_probs=31.9
Q ss_pred HhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 66 RLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 66 ~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
..+.+++++++|+.|+.... .|++ .+| +++.+|++|+|+-..
T Consensus 69 ~~~i~~~~~~~v~~id~~~~---~v~~--~~g-~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 69 EARIDMLTGPEVTALDVQTR---TISL--DDG-TTLSADAIVIATGSR 110 (410)
T ss_dssp HTTCEEEESCCEEEEETTTT---EEEE--TTS-CEEECSEEEECCCEE
T ss_pred HCCCEEEeCCEEEEEECCCC---EEEE--CCC-CEEECCEEEEccCCc
Confidence 34558999999999987654 4554 567 479999999998753
No 217
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=56.23 E-value=33 Score=32.61 Aligned_cols=47 Identities=9% Similarity=0.043 Sum_probs=32.7
Q ss_pred cc-ceeeCceeeeEEEcCC---CcEEEEE-ECCCCe-EEEecCEEEEcCCchH
Q 021616 68 GS-KVKLSWKLSGVKKLDS---GEYSLTY-ETPEGL-VSLRSRSVVMTVPSYV 114 (310)
Q Consensus 68 ~~-~i~~~~~V~~I~~~~~---~~~~v~~-~~~~g~-~~~~ad~VI~a~p~~~ 114 (310)
+. +|+.++.|++|..+++ ..+.|.. ...+|+ ..+.|+.||+|+-...
T Consensus 166 gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 166 GEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp CGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred CCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 67 8999999999998765 3223332 224553 3689999999976643
No 218
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=55.45 E-value=18 Score=32.35 Aligned_cols=42 Identities=7% Similarity=0.132 Sum_probs=31.6
Q ss_pred HHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 65 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 65 ~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
+..+.++++++.|+.|+..+. .|++ .+| +++.+|+||+|+-.
T Consensus 71 ~~~gv~~~~~~~v~~i~~~~~---~v~~--~~g-~~~~~d~lviAtG~ 112 (431)
T 1q1r_A 71 AAQNIQLLGGTQVTAINRDRQ---QVIL--SDG-RALDYDRLVLATGG 112 (431)
T ss_dssp HHTTEEEECSCCEEEEETTTT---EEEE--TTS-CEEECSEEEECCCE
T ss_pred HhCCCEEEeCCEEEEEECCCC---EEEE--CCC-CEEECCEEEEcCCC
Confidence 344558999999999987554 4554 466 47999999999865
No 219
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=55.37 E-value=19 Score=32.85 Aligned_cols=50 Identities=8% Similarity=0.068 Sum_probs=34.7
Q ss_pred HHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCe-EEEecCEEEEcCCc
Q 021616 61 EAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPS 112 (310)
Q Consensus 61 ~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~-~~~~ad~VI~a~p~ 112 (310)
+.+.+..+.++++++.|+.|+..++. +.+.. ..+|+ .++.||+||+|+-.
T Consensus 100 ~~~~~~~gv~~~~~~~v~~i~~~~~~-v~v~~-~~~g~~~~~~~d~lviAtG~ 150 (480)
T 3cgb_A 100 KTFRDKYGIDAKVRHEVTKVDTEKKI-VYAEH-TKTKDVFEFSYDRLLIATGV 150 (480)
T ss_dssp HHHHHTTCCEEESSEEEEEEETTTTE-EEEEE-TTTCCEEEEECSEEEECCCE
T ss_pred HHHHhhcCCEEEeCCEEEEEECCCCE-EEEEE-cCCCceEEEEcCEEEECCCC
Confidence 34444445588999999999887763 66543 13453 26899999999875
No 220
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=54.55 E-value=29 Score=29.05 Aligned_cols=39 Identities=8% Similarity=0.107 Sum_probs=27.5
Q ss_pred eeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 71 VKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 71 i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
...+..|..+...+.+.+.|.. .+| +++.||+||+||-.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~v~~--~~g-~~~~a~~liiATGs 115 (304)
T 4fk1_A 77 HYYEKTVVMITKQSTGLFEIVT--KDH-TKYLAERVLLATGM 115 (304)
T ss_dssp EEEECCEEEEEECTTSCEEEEE--TTC-CEEEEEEEEECCCC
T ss_pred EEEeeEEEEeeecCCCcEEEEE--CCC-CEEEeCEEEEccCC
Confidence 4455666777666554477765 567 47999999999864
No 221
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=54.06 E-value=11 Score=33.89 Aligned_cols=37 Identities=11% Similarity=0.107 Sum_probs=26.9
Q ss_pred ceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 70 KVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 70 ~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
+++.+ +|++|+.+++ +|++ ++| +++.||++|+|+-..
T Consensus 72 ~~i~~-~v~~Id~~~~---~V~~--~~g-~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 72 EFINE-KAESIDPDAN---TVTT--QSG-KKIEYDYLVIATGPK 108 (430)
T ss_dssp EEECS-CEEEEETTTT---EEEE--TTC-CEEECSEEEECCCCE
T ss_pred EEEEe-EEEEEECCCC---EEEE--CCC-CEEECCEEEEeCCCC
Confidence 45444 7899987665 3444 577 479999999998764
No 222
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=53.43 E-value=27 Score=31.35 Aligned_cols=49 Identities=8% Similarity=0.077 Sum_probs=33.7
Q ss_pred hhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 56 LTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 56 ~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
+...+....+..+.++++++.|++++. ..+++ .+| +++.+|.||+++..
T Consensus 190 ~~~~~~~~l~~~gV~i~~~~~v~~~~~-----~~v~~--~~g-~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 190 MNQPILDELDKREIPYRLNEEINAING-----NEITF--KSG-KVEHYDMIIEGVGT 238 (437)
T ss_dssp GGHHHHHHHHHTTCCEEESCCEEEEET-----TEEEE--TTS-CEEECSEEEECCCE
T ss_pred hHHHHHHHhhccceEEEeccEEEEecC-----Ceeee--cCC-eEEeeeeEEEEece
Confidence 444444444444568999999999852 23554 567 47999999999765
No 223
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=52.99 E-value=22 Score=32.00 Aligned_cols=46 Identities=15% Similarity=0.169 Sum_probs=32.7
Q ss_pred HHhccceeeCceeeeEEEcCCCcEEEEEECCCC-eEEEecCEEEEcCCc
Q 021616 65 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEG-LVSLRSRSVVMTVPS 112 (310)
Q Consensus 65 ~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g-~~~~~ad~VI~a~p~ 112 (310)
+..+.+++++++|..|+..++. +.+.. ..+| .+++.+|++|+|+-.
T Consensus 69 ~~~gv~~~~~~~v~~i~~~~~~-v~v~~-~~~g~~~~~~~d~lviAtGs 115 (452)
T 2cdu_A 69 SNLGANVQMRHQVTNVDPETKT-IKVKD-LITNEEKTEAYDKLIMTTGS 115 (452)
T ss_dssp HHTTCEEEESEEEEEEEGGGTE-EEEEE-TTTCCEEEEECSEEEECCCE
T ss_pred HHcCCEEEeCCEEEEEEcCCCE-EEEEe-cCCCceEEEECCEEEEccCC
Confidence 3345588899999999877763 66543 1222 257999999999875
No 224
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=51.70 E-value=11 Score=32.92 Aligned_cols=36 Identities=25% Similarity=0.368 Sum_probs=29.0
Q ss_pred CCCeEEeeccc--------CCCchhHHHHHHHHHHHHHHHHhhh
Q 021616 271 YQGLFLGGNYV--------AGVALGRCVESAYEVASEVSNFLSQ 306 (310)
Q Consensus 271 ~~~l~~aG~~~--------~g~gv~~ai~sG~~aA~~i~~~l~~ 306 (310)
+|+||++|... -|+-..+=+.||+.||+.|++.|..
T Consensus 293 ~~gl~~~gm~~~~~~g~~rmgp~fg~m~~sg~~~a~~~~~~~~~ 336 (344)
T 3jsk_A 293 VPGLIVGGMELSEIDGANRMGPTFGAMALSGVKAAHEAIRVFDL 336 (344)
T ss_dssp ETTEEECGGGHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEechhhHhhcCCCCCCcccceeeecCHHHHHHHHHHHHh
Confidence 58999999862 1444567799999999999998854
No 225
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=51.47 E-value=18 Score=33.63 Aligned_cols=50 Identities=12% Similarity=0.020 Sum_probs=34.5
Q ss_pred cceeeCceeeeEEEcC-CCcEEEEEECC-CCe-EEEecC-EEEEcCCchHHHhc
Q 021616 69 SKVKLSWKLSGVKKLD-SGEYSLTYETP-EGL-VSLRSR-SVVMTVPSYVASSL 118 (310)
Q Consensus 69 ~~i~~~~~V~~I~~~~-~~~~~v~~~~~-~g~-~~~~ad-~VI~a~p~~~~~~l 118 (310)
.+|++++.|++|..++ +..+.|.+... +|+ .++.|+ .||+|+-......|
T Consensus 224 ~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~l 277 (546)
T 2jbv_A 224 FTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKL 277 (546)
T ss_dssp EEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHH
T ss_pred cEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchh
Confidence 4899999999999876 43234655432 142 368898 89999877544444
No 226
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=51.03 E-value=20 Score=32.20 Aligned_cols=39 Identities=5% Similarity=0.058 Sum_probs=28.7
Q ss_pred cceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 69 SKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 69 ~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
.++++++.|.+|+..+ +...+. .+| .++.+|.||+++..
T Consensus 204 v~i~~~~~v~~i~~~~-~v~~v~---~~g-~~i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 204 VNLRLQEITMKIEGEE-RVEKVV---TDA-GEYKAELVILATGI 242 (449)
T ss_dssp SEEEESCCEEEEECSS-SCCEEE---ETT-EEEECSEEEECSCE
T ss_pred cEEEeCCeEEEEeccC-cEEEEE---eCC-CEEECCEEEEeeCC
Confidence 5899999999998655 322333 245 47999999999865
No 227
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=50.18 E-value=28 Score=31.22 Aligned_cols=44 Identities=7% Similarity=0.066 Sum_probs=31.5
Q ss_pred hccceeeCceeeeEEEcCCCcEEEEEECCCCe-EEEecCEEEEcCCc
Q 021616 67 LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPS 112 (310)
Q Consensus 67 l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~-~~~~ad~VI~a~p~ 112 (310)
.+.++++++.|..|+..++. +.+.. ..+|+ .++.+|++|+|+-.
T Consensus 69 ~gv~~~~~~~v~~i~~~~~~-v~~~~-~~~g~~~~~~~d~lviAtG~ 113 (447)
T 1nhp_A 69 RGVNVFSNTEITAIQPKEHQ-VTVKD-LVSGEERVENYDKLIISPGA 113 (447)
T ss_dssp TTCEEEETEEEEEEETTTTE-EEEEE-TTTCCEEEEECSEEEECCCE
T ss_pred CCCEEEECCEEEEEeCCCCE-EEEEe-cCCCceEEEeCCEEEEcCCC
Confidence 34588899999999877763 55542 13453 25899999999865
No 228
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=50.00 E-value=21 Score=31.20 Aligned_cols=49 Identities=12% Similarity=0.197 Sum_probs=33.1
Q ss_pred hhhHHHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 55 GLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 55 G~~~L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
-+........+..+.+++++++|++|+ .+ .|.+ .+| + +.+|.||+++..
T Consensus 184 ~~~~~l~~~l~~~gV~i~~~~~v~~i~--~~---~v~~--~~g-~-i~~D~vi~a~G~ 232 (367)
T 1xhc_A 184 ELSNMIKDMLEETGVKFFLNSELLEAN--EE---GVLT--NSG-F-IEGKVKICAIGI 232 (367)
T ss_dssp HHHHHHHHHHHHTTEEEECSCCEEEEC--SS---EEEE--TTE-E-EECSCEEEECCE
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEE--ee---EEEE--CCC-E-EEcCEEEECcCC
Confidence 344444333344456899999999997 22 3454 567 4 999999999865
No 229
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=48.84 E-value=32 Score=32.93 Aligned_cols=55 Identities=7% Similarity=-0.026 Sum_probs=35.5
Q ss_pred HHHHHHHHh-ccceeeCceeeeEEEcCC---CcEEEEE-ECCCCe-EEEecCEEEEcCCch
Q 021616 59 LPEAISKRL-GSKVKLSWKLSGVKKLDS---GEYSLTY-ETPEGL-VSLRSRSVVMTVPSY 113 (310)
Q Consensus 59 L~~~L~~~l-~~~i~~~~~V~~I~~~~~---~~~~v~~-~~~~g~-~~~~ad~VI~a~p~~ 113 (310)
|.+.+.+.. +.+|+.++.|.+|..+++ ..+.|.. +..+|+ ..+.|+.||+|+-..
T Consensus 172 L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~ 232 (662)
T 3gyx_A 172 VAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGA 232 (662)
T ss_dssp HHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred HHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCcc
Confidence 444444432 458999999999988766 3223332 223442 468999999998653
No 230
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=48.66 E-value=43 Score=31.37 Aligned_cols=46 Identities=17% Similarity=0.159 Sum_probs=29.4
Q ss_pred ccceeeCceeeeEEEc------C--CCcEEEEEECCCCeE-EEecCEEEEcCCch
Q 021616 68 GSKVKLSWKLSGVKKL------D--SGEYSLTYETPEGLV-SLRSRSVVMTVPSY 113 (310)
Q Consensus 68 ~~~i~~~~~V~~I~~~------~--~~~~~v~~~~~~g~~-~~~ad~VI~a~p~~ 113 (310)
+.++++++.|++|... + .+.+.+.+...+|++ .+.+|.||+++...
T Consensus 340 gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~ 394 (598)
T 2x8g_A 340 GVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGRE 394 (598)
T ss_dssp TCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEE
T ss_pred CCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCc
Confidence 4589999988888643 2 123555543346632 23599999998753
No 231
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=48.61 E-value=29 Score=33.18 Aligned_cols=49 Identities=16% Similarity=0.158 Sum_probs=33.6
Q ss_pred HHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCe-EEEecCEEEEcCCch
Q 021616 59 LPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPSY 113 (310)
Q Consensus 59 L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~-~~~~ad~VI~a~p~~ 113 (310)
+.....+..+.++++++.|++|+ +++ +.+. .+|+ +++.+|.||+++...
T Consensus 578 ~~~~~l~~~GV~v~~~~~v~~i~--~~~-v~~~---~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 578 IHRTTLLSRGVKMIPGVSYQKID--DDG-LHVV---INGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp HHHHHHHHTTCEEECSCEEEEEE--TTE-EEEE---ETTEEEEECCSEEEECCCEE
T ss_pred HHHHHHHhcCCEEEeCcEEEEEe--CCe-EEEe---cCCeEEEEeCCEEEECCCcc
Confidence 33333344466999999999997 343 5553 2453 478999999998764
No 232
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=48.56 E-value=26 Score=31.88 Aligned_cols=45 Identities=11% Similarity=0.086 Sum_probs=32.1
Q ss_pred HHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 65 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 65 ~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
+..+.+++++++|..|+..++. +.+.. +.++ +++.+|+||+|+-.
T Consensus 103 ~~~gv~v~~~~~v~~i~~~~~~-v~v~~-~g~~-~~~~~d~lviAtG~ 147 (490)
T 2bc0_A 103 ESLGAKVYMESPVQSIDYDAKT-VTALV-DGKN-HVETYDKLIFATGS 147 (490)
T ss_dssp HHTTCEEETTCCEEEEETTTTE-EEEEE-TTEE-EEEECSEEEECCCE
T ss_pred HhCCCEEEeCCEEEEEECCCCE-EEEEe-CCcE-EEEECCEEEECCCC
Confidence 3345578899999999877763 65542 2122 47899999999875
No 233
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=48.29 E-value=25 Score=30.69 Aligned_cols=41 Identities=10% Similarity=0.140 Sum_probs=29.9
Q ss_pred HHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 65 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 65 ~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
+..+.+++++++|+.|+... +.|+. +| +++.||++|+||-.
T Consensus 71 ~~~~v~~~~g~~v~~id~~~---~~V~~---~g-~~~~~d~lViATGs 111 (367)
T 1xhc_A 71 RKRGIEIRLAEEAKLIDRGR---KVVIT---EK-GEVPYDTLVLATGA 111 (367)
T ss_dssp HHHTEEEECSCCEEEEETTT---TEEEE---SS-CEEECSEEEECCCE
T ss_pred HhCCcEEEECCEEEEEECCC---CEEEE---CC-cEEECCEEEECCCC
Confidence 33445889999999998654 34542 45 47999999999875
No 234
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=47.66 E-value=24 Score=31.26 Aligned_cols=42 Identities=7% Similarity=0.180 Sum_probs=31.6
Q ss_pred HHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 65 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 65 ~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
+..+.+++++++|+.|+.... .|.+ .+| +.+.+|++|+|+-.
T Consensus 76 ~~~~i~~~~~~~v~~id~~~~---~v~~--~~g-~~~~~d~lvlAtG~ 117 (415)
T 3lxd_A 76 EDKAVEMKLGAEVVSLDPAAH---TVKL--GDG-SAIEYGKLIWATGG 117 (415)
T ss_dssp HHTTEEEEETCCEEEEETTTT---EEEE--TTS-CEEEEEEEEECCCE
T ss_pred HHCCcEEEeCCEEEEEECCCC---EEEE--CCC-CEEEeeEEEEccCC
Confidence 344558999999999987654 4554 566 47999999999864
No 235
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=47.48 E-value=19 Score=32.44 Aligned_cols=43 Identities=16% Similarity=0.077 Sum_probs=31.0
Q ss_pred HHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 65 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 65 ~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
+..+.+++++++|+.|+... +.|.. .+|+..+.+|+||+|+-.
T Consensus 70 ~~~gi~v~~~~~v~~i~~~~---~~v~~--~~g~~~~~~d~lviAtG~ 112 (449)
T 3kd9_A 70 KKRGIDLHLNAEVIEVDTGY---VRVRE--NGGEKSYEWDYLVFANGA 112 (449)
T ss_dssp HHTTCEEETTCEEEEECSSE---EEEEC--SSSEEEEECSEEEECCCE
T ss_pred HhcCcEEEecCEEEEEecCC---CEEEE--CCceEEEEcCEEEECCCC
Confidence 44455899999999986432 55553 556447899999999864
No 236
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=47.46 E-value=16 Score=33.56 Aligned_cols=50 Identities=14% Similarity=0.141 Sum_probs=37.1
Q ss_pred ceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCchHHHhcc
Q 021616 70 KVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLL 119 (310)
Q Consensus 70 ~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll 119 (310)
+|.+++.|.+|..+++....|.+...++...+.++.||++.-+-...+||
T Consensus 227 ~v~~~~~v~~i~~~~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LL 276 (526)
T 3t37_A 227 TILTGSRVRRLKLEGNQVRSLEVVGRQGSAEVFADQIVLCAGALESPALL 276 (526)
T ss_dssp EEECSCEEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHH
T ss_pred EEEeCCEEEEEEecCCeEEEEEEEecCceEEEeecceEEcccccCCcchh
Confidence 79999999999988774344555445555568899999998776666654
No 237
>3mfn_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 2.02A {Dyadobacter fermentans}
Probab=46.21 E-value=12 Score=27.86 Aligned_cols=34 Identities=21% Similarity=0.342 Sum_probs=28.4
Q ss_pred CCeEEeecccCCCchhHHHHHHHHHHHHHHHHhhh
Q 021616 272 QGLFLGGNYVAGVALGRCVESAYEVASEVSNFLSQ 306 (310)
Q Consensus 272 ~~l~~aG~~~~g~gv~~ai~sG~~aA~~i~~~l~~ 306 (310)
.-|++|+.| .|....+.+..|.++|+.|+.-.+.
T Consensus 118 ~~LhlAM~Y-dG~~~a~v~K~Gl~~Ae~iI~wvE~ 151 (157)
T 3mfn_A 118 EQLHLVMAY-DGVGDAEVVKLGFQRAEIIIDWVER 151 (157)
T ss_dssp HHHCCCCCC-TCCCBHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhc-cCcchHHHHHHHHHHHHHHHHHHHH
Confidence 458888876 6888899999999999999976654
No 238
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=46.05 E-value=21 Score=33.03 Aligned_cols=37 Identities=11% Similarity=0.200 Sum_probs=30.0
Q ss_pred CCCCeEEeecccCCC--chhHHHHHHHHHHHHHHHHhhh
Q 021616 270 GYQGLFLGGNYVAGV--ALGRCVESAYEVASEVSNFLSQ 306 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~--gv~~ai~sG~~aA~~i~~~l~~ 306 (310)
..++||.+||..... .+..|+.+|..||..|.+.|..
T Consensus 479 s~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~L~~ 517 (521)
T 1hyu_A 479 SVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLIR 517 (521)
T ss_dssp SSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeecccCCCcceeeehHHhHHHHHHHHHHHHHh
Confidence 458999999986533 4688999999999999887754
No 239
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=45.19 E-value=29 Score=32.93 Aligned_cols=50 Identities=14% Similarity=0.035 Sum_probs=34.7
Q ss_pred cceeeCceeeeEEEcCCC--cEEEEEEC-CCCe-EEEecCEEEEcCCchHHHhc
Q 021616 69 SKVKLSWKLSGVKKLDSG--EYSLTYET-PEGL-VSLRSRSVVMTVPSYVASSL 118 (310)
Q Consensus 69 ~~i~~~~~V~~I~~~~~~--~~~v~~~~-~~g~-~~~~ad~VI~a~p~~~~~~l 118 (310)
.+|++++.|++|..++++ ...|++.+ .+|+ .++.||.||+++-......+
T Consensus 275 v~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~l 328 (623)
T 3pl8_A 275 FNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQL 328 (623)
T ss_dssp EEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHH
T ss_pred EEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHH
Confidence 379999999999987532 23455533 3453 46889999999887555444
No 240
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=45.07 E-value=16 Score=33.83 Aligned_cols=60 Identities=15% Similarity=0.134 Sum_probs=37.6
Q ss_pred HHHHHHHHhccceeeCceeeeEEEcCCCcEEEEEECC-CCeE-EE---ecCEEEEcCCchHHHhc
Q 021616 59 LPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETP-EGLV-SL---RSRSVVMTVPSYVASSL 118 (310)
Q Consensus 59 L~~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~-~g~~-~~---~ad~VI~a~p~~~~~~l 118 (310)
+.+.+.+.-+.+|++++.|++|..+++....|.+... +|+. ++ .++.||+|+-......|
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~l 265 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRI 265 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHH
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHH
Confidence 4444433223489999999999987653335665322 3531 23 78999999887554444
No 241
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=44.78 E-value=23 Score=33.78 Aligned_cols=39 Identities=8% Similarity=0.149 Sum_probs=28.9
Q ss_pred hhhcCCCCeEEeecccCCCchhHHHHHHHHHHHHHHHHh
Q 021616 266 LRDNGYQGLFLGGNYVAGVALGRCVESAYEVASEVSNFL 304 (310)
Q Consensus 266 ~~~~~~~~l~~aG~~~~g~gv~~ai~sG~~aA~~i~~~l 304 (310)
++....+||||||+-....|.+.|..+|..|+..+...+
T Consensus 373 le~k~~~gLf~AGqi~g~~Gy~eA~a~G~~AG~naa~~~ 411 (641)
T 3cp8_A 373 METRPVENLFFAGQINGTSGYEEAAAQGLMAGINAVRKI 411 (641)
T ss_dssp SBBSSSBTEEECSGGGTBCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCcCCEEEEEeecCCccHHHHHHHHHHHHHHHHHHh
Confidence 443235899999998765678899999888887765543
No 242
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=44.73 E-value=17 Score=33.24 Aligned_cols=39 Identities=13% Similarity=0.191 Sum_probs=30.0
Q ss_pred ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 68 GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 68 ~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
+.+++++++|++|+..+. .|++ .+| +++.||++|+||-.
T Consensus 104 gv~~~~g~~v~~id~~~~---~V~~--~~g-~~i~yd~lviATGs 142 (493)
T 1m6i_A 104 GVAVLTGKKVVQLDVRDN---MVKL--NDG-SQITYEKCLIATGG 142 (493)
T ss_dssp EEEEEETCCEEEEEGGGT---EEEE--TTS-CEEEEEEEEECCCE
T ss_pred CeEEEcCCEEEEEECCCC---EEEE--CCC-CEEECCEEEECCCC
Confidence 347899999999987654 4554 567 47999999999864
No 243
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=44.61 E-value=26 Score=31.18 Aligned_cols=37 Identities=22% Similarity=0.108 Sum_probs=29.1
Q ss_pred CCCCeEEeecccCCC-------------chhHHHHHHHHHHHHHHHHhhh
Q 021616 270 GYQGLFLGGNYVAGV-------------ALGRCVESAYEVASEVSNFLSQ 306 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~-------------gv~~ai~sG~~aA~~i~~~l~~ 306 (310)
..++||.+||..... ....|+.+|..+|+.|.+.+.-
T Consensus 285 ~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g 334 (430)
T 3h28_A 285 TYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRN 334 (430)
T ss_dssp SSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcC
Confidence 468999999975422 2456899999999999988754
No 244
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=44.52 E-value=26 Score=31.06 Aligned_cols=39 Identities=10% Similarity=0.129 Sum_probs=29.9
Q ss_pred ccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 68 GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 68 ~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
+.+++++++|+.|+..+ +.|++ .+| +++.+|+||+|+-.
T Consensus 73 ~v~~~~~~~v~~i~~~~---~~v~~--~~g-~~~~~d~lviAtG~ 111 (408)
T 2gqw_A 73 EVEWLLGVTAQSFDPQA---HTVAL--SDG-RTLPYGTLVLATGA 111 (408)
T ss_dssp SCEEEETCCEEEEETTT---TEEEE--TTS-CEEECSEEEECCCE
T ss_pred CCEEEcCCEEEEEECCC---CEEEE--CCC-CEEECCEEEECCCC
Confidence 34789999999998754 34555 466 47999999999876
No 245
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=42.15 E-value=22 Score=34.01 Aligned_cols=39 Identities=15% Similarity=0.379 Sum_probs=29.2
Q ss_pred ceeeCceeeeEEEcCCCcEE-EEEECCCCeEEEecCEEEEcCCch
Q 021616 70 KVKLSWKLSGVKKLDSGEYS-LTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 70 ~i~~~~~V~~I~~~~~~~~~-v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
+| ++..|+.|..++++ +. |.+ .+| +++.||.||+|+-..
T Consensus 134 ~I-~~~~V~~L~~d~g~-V~GV~t--~~G-~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 134 DL-LQDTVIGVSANSGK-FSSVTV--RSG-RAIQAKAAILACGTF 173 (641)
T ss_dssp EE-EECCEEEEEEETTE-EEEEEE--TTS-CEEEEEEEEECCTTC
T ss_pred EE-EeeEEEEEEecCCE-EEEEEE--CCC-cEEEeCEEEECcCCC
Confidence 56 46699999887764 54 654 567 479999999998754
No 246
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=41.57 E-value=26 Score=30.89 Aligned_cols=35 Identities=17% Similarity=0.089 Sum_probs=28.4
Q ss_pred CCCCeEEeecccC--C-CchhHHHHHHHHHHHHHHHHh
Q 021616 270 GYQGLFLGGNYVA--G-VALGRCVESAYEVASEVSNFL 304 (310)
Q Consensus 270 ~~~~l~~aG~~~~--g-~gv~~ai~sG~~aA~~i~~~l 304 (310)
..++||.+||... . .....|..+|..+|..|...+
T Consensus 298 ~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 298 KYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp SCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 4689999999864 2 235779999999999999887
No 247
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=40.56 E-value=11 Score=35.25 Aligned_cols=35 Identities=20% Similarity=0.279 Sum_probs=27.2
Q ss_pred CCCCeEEeecccC---------CCchhHHHHHHHHHHHHHHHHh
Q 021616 270 GYQGLFLGGNYVA---------GVALGRCVESAYEVASEVSNFL 304 (310)
Q Consensus 270 ~~~~l~~aG~~~~---------g~gv~~ai~sG~~aA~~i~~~l 304 (310)
+.+|||-||+... |.++..|+..|+.|++.+.+..
T Consensus 520 ~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~~ 563 (566)
T 1qo8_A 520 PIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKHA 563 (566)
T ss_dssp EEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHh
Confidence 4689999998632 2346789999999999987654
No 248
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=39.84 E-value=32 Score=30.68 Aligned_cols=37 Identities=14% Similarity=0.037 Sum_probs=28.7
Q ss_pred CCCCeEEeecccCCC-------------chhHHHHHHHHHHHHHHHHhhh
Q 021616 270 GYQGLFLGGNYVAGV-------------ALGRCVESAYEVASEVSNFLSQ 306 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~-------------gv~~ai~sG~~aA~~i~~~l~~ 306 (310)
..++||.+||..... ....|+.+|..+|+.|.+.+.-
T Consensus 296 ~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g 345 (437)
T 3sx6_A 296 KYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEG 345 (437)
T ss_dssp SCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 468999999975421 2346899999999999988753
No 249
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=38.97 E-value=31 Score=30.21 Aligned_cols=36 Identities=17% Similarity=0.104 Sum_probs=28.4
Q ss_pred CCCCeEEeecccCCCc----hhHHHHHHHHHHHHHHHHhh
Q 021616 270 GYQGLFLGGNYVAGVA----LGRCVESAYEVASEVSNFLS 305 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g----v~~ai~sG~~aA~~i~~~l~ 305 (310)
.+++||.+||-..+.. ...|..+|..+|+.|++.+.
T Consensus 285 ~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~~~l~ 324 (401)
T 3vrd_B 285 LQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVVALLK 324 (401)
T ss_dssp SSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhc
Confidence 4689999999765422 35678999999999998875
No 250
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=38.94 E-value=20 Score=30.05 Aligned_cols=36 Identities=19% Similarity=0.234 Sum_probs=29.4
Q ss_pred CCCeEEeeccc--------CCCchhHHHHHHHHHHHHHHHHhhh
Q 021616 271 YQGLFLGGNYV--------AGVALGRCVESAYEVASEVSNFLSQ 306 (310)
Q Consensus 271 ~~~l~~aG~~~--------~g~gv~~ai~sG~~aA~~i~~~l~~ 306 (310)
.|++|.+|+.. .|+...+++.||..+|..|.+.|..
T Consensus 233 ~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~~l~~ 276 (284)
T 1rp0_A 233 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGL 276 (284)
T ss_dssp ETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHHHhhh
Confidence 48999999853 2455788999999999999998754
No 251
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=38.07 E-value=12 Score=35.04 Aligned_cols=35 Identities=17% Similarity=0.274 Sum_probs=26.9
Q ss_pred CCCCeEEeeccc---------CCCchhHHHHHHHHHHHHHHHHh
Q 021616 270 GYQGLFLGGNYV---------AGVALGRCVESAYEVASEVSNFL 304 (310)
Q Consensus 270 ~~~~l~~aG~~~---------~g~gv~~ai~sG~~aA~~i~~~l 304 (310)
+.+|||-||+.. .|.++..|+..|+.|++.+.+..
T Consensus 525 ~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~~ 568 (571)
T 1y0p_A 525 VIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKYS 568 (571)
T ss_dssp EEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHHHh
Confidence 468999999852 23457789999999999987653
No 252
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=37.76 E-value=12 Score=36.04 Aligned_cols=36 Identities=19% Similarity=0.051 Sum_probs=29.8
Q ss_pred CCCCeEEeecccCCCchhHHHHHHHHHHHHHHHHhh
Q 021616 270 GYQGLFLGGNYVAGVALGRCVESAYEVASEVSNFLS 305 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~gv~~ai~sG~~aA~~i~~~l~ 305 (310)
..++||.+||......+..|+.+|+.+|..|...+.
T Consensus 640 ~~~~VyaiGD~~~~~~~~~A~~~g~~aa~~i~~~l~ 675 (690)
T 3k30_A 640 EIASVRGIGDAWAPGTIAAAVWSGRRAAEEFDAVLP 675 (690)
T ss_dssp SCSEEEECGGGTSCBCHHHHHHHHHHHHHHTTCCCC
T ss_pred CCCCEEEEeCCCchhhHHHHHHHHHHHHHHHHhhcc
Confidence 468999999987655677899999999999987653
No 253
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=37.69 E-value=19 Score=32.66 Aligned_cols=36 Identities=14% Similarity=0.209 Sum_probs=29.2
Q ss_pred CCCeEEeecccCCC-c-hhHHHHHHHHHHHHHHHHhhh
Q 021616 271 YQGLFLGGNYVAGV-A-LGRCVESAYEVASEVSNFLSQ 306 (310)
Q Consensus 271 ~~~l~~aG~~~~g~-g-v~~ai~sG~~aA~~i~~~l~~ 306 (310)
.++||.+||-..|. + +..++..|+.+|..|+..+..
T Consensus 359 ~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 359 VPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp CTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 48999999975443 3 568999999999999988765
No 254
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=36.76 E-value=12 Score=35.05 Aligned_cols=35 Identities=20% Similarity=0.338 Sum_probs=27.1
Q ss_pred CCCCeEEeeccc---------CCCchhHHHHHHHHHHHHHHHHh
Q 021616 270 GYQGLFLGGNYV---------AGVALGRCVESAYEVASEVSNFL 304 (310)
Q Consensus 270 ~~~~l~~aG~~~---------~g~gv~~ai~sG~~aA~~i~~~l 304 (310)
+.+|||-||+.. .|.++..|+..|+.|++.+.+..
T Consensus 526 ~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~~~ 569 (572)
T 1d4d_A 526 PITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAKFA 569 (572)
T ss_dssp EEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHHHh
Confidence 468999999852 23357789999999999987654
No 255
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=35.22 E-value=29 Score=31.42 Aligned_cols=34 Identities=21% Similarity=0.346 Sum_probs=27.6
Q ss_pred CCCCeEEeecccCCCc-hhHHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSNF 303 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g-v~~ai~sG~~aA~~i~~~ 303 (310)
..++||.+||...+.. ...|+.+|+.+|+.|...
T Consensus 309 ~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 343 (476)
T 3lad_A 309 SVPGVYAIGDVVRGAMLAHKASEEGVVVAERIAGH 343 (476)
T ss_dssp SSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEccCCCcccHHHHHHHHHHHHHHhcCC
Confidence 4689999999875443 577999999999999864
No 256
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=34.84 E-value=47 Score=28.92 Aligned_cols=45 Identities=16% Similarity=0.291 Sum_probs=31.9
Q ss_pred HHHHHHhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 61 EAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 61 ~~L~~~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
+.+.+..+.+++++++|+.|+..+. .|.+ .++ ++.+|++|+|+-.
T Consensus 67 ~~~~~~~~v~~~~~~~v~~i~~~~~---~v~~--~~~--~~~~d~lviAtG~ 111 (384)
T 2v3a_A 67 GAMAEQLNARILTHTRVTGIDPGHQ---RIWI--GEE--EVRYRDLVLAWGA 111 (384)
T ss_dssp HHHHHHTTCEEECSCCCCEEEGGGT---EEEE--TTE--EEECSEEEECCCE
T ss_pred HHHHHhCCcEEEeCCEEEEEECCCC---EEEE--CCc--EEECCEEEEeCCC
Confidence 3444445557888999999987544 4554 333 6899999999876
No 257
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=34.57 E-value=34 Score=34.33 Aligned_cols=36 Identities=6% Similarity=0.104 Sum_probs=30.3
Q ss_pred CCCCeEEeecccCCCchhHHHHHHHHHHHHHHHHhh
Q 021616 270 GYQGLFLGGNYVAGVALGRCVESAYEVASEVSNFLS 305 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~gv~~ai~sG~~aA~~i~~~l~ 305 (310)
..++||.+||.....++..|+.+|+.||..|...+.
T Consensus 409 s~p~IyAaGD~a~~~~l~~A~~~G~~aA~~i~~~lg 444 (965)
T 2gag_A 409 AVANQHLAGAMTGRLDTASALSTGAATGAAAATAAG 444 (965)
T ss_dssp CCTTEEECGGGGTCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEecCCchhHHHHHHHHHHHHHHHHHHcC
Confidence 358999999986655677899999999999998764
No 258
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=34.42 E-value=23 Score=32.99 Aligned_cols=35 Identities=17% Similarity=0.384 Sum_probs=27.1
Q ss_pred CCCCeEEeeccc-C---------CCchhHHHHHHHHHHHHHHHHh
Q 021616 270 GYQGLFLGGNYV-A---------GVALGRCVESAYEVASEVSNFL 304 (310)
Q Consensus 270 ~~~~l~~aG~~~-~---------g~gv~~ai~sG~~aA~~i~~~l 304 (310)
+.+|||.||+.. . |.++.+|+..|+.|++.+.+.+
T Consensus 366 ~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~ 410 (540)
T 1chu_A 366 DVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRM 410 (540)
T ss_dssp SSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHhc
Confidence 579999999953 2 2246779999999999987654
No 259
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=34.39 E-value=50 Score=31.04 Aligned_cols=49 Identities=14% Similarity=0.184 Sum_probs=33.9
Q ss_pred ceeeCceeeeEEEcC---CC-cEEEEEECCCCe-EEEecC-EEEEcCCchHHHhc
Q 021616 70 KVKLSWKLSGVKKLD---SG-EYSLTYETPEGL-VSLRSR-SVVMTVPSYVASSL 118 (310)
Q Consensus 70 ~i~~~~~V~~I~~~~---~~-~~~v~~~~~~g~-~~~~ad-~VI~a~p~~~~~~l 118 (310)
+|.+++.|++|..++ ++ .+.|.+...+|. .++.|+ -||+++-+-...+|
T Consensus 243 ~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqL 297 (583)
T 3qvp_A 243 QVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTI 297 (583)
T ss_dssp EEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHH
T ss_pred EEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHH
Confidence 799999999999873 22 245666434553 357786 59999877666555
No 260
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=34.13 E-value=36 Score=31.07 Aligned_cols=55 Identities=15% Similarity=0.178 Sum_probs=37.2
Q ss_pred hHHHHHHHHHh--ccceeeCceeeeEEEcCCCcEEEEEECCCCe-EEEecCEEEEcCCch
Q 021616 57 TMLPEAISKRL--GSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPSY 113 (310)
Q Consensus 57 ~~L~~~L~~~l--~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~-~~~~ad~VI~a~p~~ 113 (310)
..+.+.+.+.+ +.++++++.|.+|+..++. +.+... .+++ ..+.+|++|+|+-..
T Consensus 161 ~~~~~~l~~~l~~~v~~~~~~~v~~i~~~~~~-~~~~~~-~~~~~~~~~~d~lvlAtGa~ 218 (493)
T 1y56_A 161 RKVVEELVGKLNENTKIYLETSALGVFDKGEY-FLVPVV-RGDKLIEILAKRVVLATGAI 218 (493)
T ss_dssp HHHHHHHHHTCCTTEEEETTEEECCCEECSSS-EEEEEE-ETTEEEEEEESCEEECCCEE
T ss_pred HHHHHHHHHHHhcCCEEEcCCEEEEEEcCCcE-EEEEEe-cCCeEEEEECCEEEECCCCC
Confidence 34555655544 3468899999999988774 655432 2342 368999999998653
No 261
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=33.61 E-value=63 Score=31.20 Aligned_cols=43 Identities=9% Similarity=-0.076 Sum_probs=28.4
Q ss_pred ccceeeCceeeeEEEcCCCcEEEEEECCCCeE------------------EEecCEEEEcCCch
Q 021616 68 GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLV------------------SLRSRSVVMTVPSY 113 (310)
Q Consensus 68 ~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~------------------~~~ad~VI~a~p~~ 113 (310)
+.++++++.|++|.. ++ +.+.....++.+ ++.+|.||+++...
T Consensus 585 GV~i~~~~~v~~i~~--~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~ 645 (729)
T 1o94_A 585 HVEELGDHFCSRIEP--GR-MEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRH 645 (729)
T ss_dssp TCEEECSEEEEEEET--TE-EEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEE
T ss_pred CCEEEcCcEEEEEEC--Ce-EEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCC
Confidence 568999999999973 33 444431122212 38999999998753
No 262
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=33.50 E-value=53 Score=30.36 Aligned_cols=50 Identities=10% Similarity=0.144 Sum_probs=34.3
Q ss_pred cceeeCceeeeEEEcCC---CcEEEEEECCCCeE-EE---ecCEEEEcCCchHHHhc
Q 021616 69 SKVKLSWKLSGVKKLDS---GEYSLTYETPEGLV-SL---RSRSVVMTVPSYVASSL 118 (310)
Q Consensus 69 ~~i~~~~~V~~I~~~~~---~~~~v~~~~~~g~~-~~---~ad~VI~a~p~~~~~~l 118 (310)
.+|++++.|++|..+++ ..+.|.+.+.+|.. ++ .++.||+|+-.....+|
T Consensus 209 ~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~l 265 (536)
T 1ju2_A 209 LRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQL 265 (536)
T ss_dssp EEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHH
T ss_pred cEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHH
Confidence 48999999999998763 22446664445632 34 56899999887655544
No 263
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=33.46 E-value=63 Score=28.36 Aligned_cols=40 Identities=8% Similarity=0.151 Sum_probs=29.6
Q ss_pred HhccceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 66 RLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 66 ~l~~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
..+.++++ ++|++|+..+. .|++ .+| +++.+|++|+|+-.
T Consensus 69 ~~~i~~~~-~~v~~id~~~~---~v~~--~~g-~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 69 DQAIELIS-DRMVSIDREGR---KLLL--ASG-TAIEYGHLVLATGA 108 (404)
T ss_dssp HTTEEEEC-CCEEEEETTTT---EEEE--SSS-CEEECSEEEECCCE
T ss_pred hCCCEEEE-EEEEEEECCCC---EEEE--CCC-CEEECCEEEEeeCC
Confidence 34457888 99999987654 3444 466 47899999999865
No 264
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=33.19 E-value=25 Score=31.87 Aligned_cols=37 Identities=16% Similarity=0.228 Sum_probs=28.8
Q ss_pred CCCCeEEeecccCCC-c-hhHHHHHHHHHHHHHHHHhhh
Q 021616 270 GYQGLFLGGNYVAGV-A-LGRCVESAYEVASEVSNFLSQ 306 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~-g-v~~ai~sG~~aA~~i~~~l~~ 306 (310)
..++||.+||-..|+ + +..|+..|..+|..|+..+..
T Consensus 350 ~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~~l~~ 388 (456)
T 1lqt_A 350 GSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLGN 388 (456)
T ss_dssp TCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 358999999975443 2 457999999999999887754
No 265
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=32.56 E-value=78 Score=28.26 Aligned_cols=33 Identities=18% Similarity=0.239 Sum_probs=26.5
Q ss_pred CCCCeEEeecccCCCc-hhHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSN 302 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g-v~~ai~sG~~aA~~i~~ 302 (310)
..++||.+||...+.. ...|+.+|+.+|..|..
T Consensus 299 ~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 332 (455)
T 1ebd_A 299 SVPNIFAIGDIVPGPALAHKASYEGKVAAEAIAG 332 (455)
T ss_dssp SSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcC
Confidence 4589999999865544 46789999999999875
No 266
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=31.85 E-value=43 Score=33.88 Aligned_cols=36 Identities=14% Similarity=0.222 Sum_probs=29.8
Q ss_pred CCCCeEEeecccCCCc-hhHHHHHHHHHHHHHHHHhh
Q 021616 270 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSNFLS 305 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g-v~~ai~sG~~aA~~i~~~l~ 305 (310)
..++||.+||-..+.. +..|+..|+.||..|...|.
T Consensus 472 s~~~VfA~GD~~~~~~~~~~A~~~G~~aA~~i~~~L~ 508 (1025)
T 1gte_A 472 SEPWVFAGGDIVGMANTTVESVNDGKQASWYIHKYIQ 508 (1025)
T ss_dssp SSTTEEECSGGGCSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 3589999999876543 57899999999999998765
No 267
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=31.57 E-value=17 Score=33.43 Aligned_cols=32 Identities=22% Similarity=0.318 Sum_probs=24.9
Q ss_pred CCCCeEEeecccC---------CCchhHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVA---------GVALGRCVESAYEVASEVS 301 (310)
Q Consensus 270 ~~~~l~~aG~~~~---------g~gv~~ai~sG~~aA~~i~ 301 (310)
+.+|||-||+-.. |.++..|+.+|+.|++.+.
T Consensus 467 ~I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa 507 (510)
T 4at0_A 467 PIPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAA 507 (510)
T ss_dssp EEEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHH
T ss_pred CcCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHH
Confidence 4689999998532 3347789999999998875
No 268
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=31.37 E-value=42 Score=30.59 Aligned_cols=33 Identities=9% Similarity=0.232 Sum_probs=27.3
Q ss_pred CCCCeEEeecccCCCc-hhHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSN 302 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g-v~~ai~sG~~aA~~i~~ 302 (310)
..++||.+||...+.. ...|+.+|+.||..|..
T Consensus 304 ~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 304 SVDHIFVAGDANNTLTLLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp SSTTEEECGGGGTSSCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEecCCCCccHHHHHHHHHHHHHHHcC
Confidence 4589999999876544 46899999999999986
No 269
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=31.05 E-value=40 Score=30.34 Aligned_cols=34 Identities=12% Similarity=0.087 Sum_probs=27.4
Q ss_pred CCCCeEEeecccCCCc-hhHHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSNF 303 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g-v~~ai~sG~~aA~~i~~~ 303 (310)
..++||.+||-..+.. ...|+.+|+.+|+.|+..
T Consensus 297 ~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 331 (463)
T 4dna_A 297 STPGIYALGDVTDRVQLTPVAIHEAMCFIETEYKN 331 (463)
T ss_dssp SSTTEEECSGGGSSCCCHHHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEEEecCCCCCChHHHHHHHHHHHHHHcCC
Confidence 4689999999866444 467999999999999753
No 270
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=30.86 E-value=37 Score=29.66 Aligned_cols=33 Identities=18% Similarity=0.305 Sum_probs=27.8
Q ss_pred CCeEEeeccc------CCCchhHHHHHHHHHHHHHHHHh
Q 021616 272 QGLFLGGNYV------AGVALGRCVESAYEVASEVSNFL 304 (310)
Q Consensus 272 ~~l~~aG~~~------~g~gv~~ai~sG~~aA~~i~~~l 304 (310)
+++.++||.. .|-|++-|+.+|..+|+.|.+.+
T Consensus 286 ~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~ 324 (399)
T 2x3n_A 286 DNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLAL 324 (399)
T ss_dssp TTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhh
Confidence 6899999984 26789999999999999987654
No 271
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=30.83 E-value=44 Score=31.96 Aligned_cols=39 Identities=15% Similarity=0.253 Sum_probs=27.2
Q ss_pred HhhhcCCCCeEEeecccCCCchhHHHHHHHHHHHHHHHH
Q 021616 265 SLRDNGYQGLFLGGNYVAGVALGRCVESAYEVASEVSNF 303 (310)
Q Consensus 265 ~~~~~~~~~l~~aG~~~~g~gv~~ai~sG~~aA~~i~~~ 303 (310)
.++....+||||||.-..-.|-+.|..+|..|+......
T Consensus 378 tle~k~~~gLf~AGqinGttGYeEAaaqGl~AG~nAa~~ 416 (651)
T 3ces_A 378 TLESKFIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARL 416 (651)
T ss_dssp TSBBSSSBTEEECSGGGTCCCHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCeEEEEEecCCcChHHHHHHHHHHHHHHHHH
Confidence 344334589999998765456788888887777665443
No 272
>2l5r_A Antimicrobial peptide alyteserin-1C; alpha helix, antimicrobial protein; NMR {Alytes obstetricans}
Probab=30.44 E-value=26 Score=17.15 Aligned_cols=16 Identities=31% Similarity=0.592 Sum_probs=13.3
Q ss_pred ccchhhHHHHHHHHHh
Q 021616 52 FRKGLTMLPEAISKRL 67 (310)
Q Consensus 52 ~~gG~~~L~~~L~~~l 67 (310)
|+.|+++|++.++..+
T Consensus 6 fkaglgslvkgiaahv 21 (26)
T 2l5r_A 6 FKAGLGSLVKGIAAHV 21 (26)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHH
Confidence 5679999999988765
No 273
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=29.74 E-value=29 Score=31.61 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=27.3
Q ss_pred CCCCeEEeecccCCCc-hhHHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSNF 303 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g-v~~ai~sG~~aA~~i~~~ 303 (310)
..++||.+||-..+.. ...|+.+|+.+|+.|...
T Consensus 329 ~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 363 (491)
T 3urh_A 329 SIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQ 363 (491)
T ss_dssp SSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTTS
T ss_pred CCCCEEEEEecCCCccchhHHHHHHHHHHHHHcCC
Confidence 4589999999865443 578999999999998754
No 274
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=29.36 E-value=44 Score=30.29 Aligned_cols=34 Identities=6% Similarity=0.049 Sum_probs=26.9
Q ss_pred CCCCeEEeecccCCCc-hhHHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSNF 303 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g-v~~ai~sG~~aA~~i~~~ 303 (310)
..++||.+||...+.. ...|+.+|+.+|+.|+..
T Consensus 317 ~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 351 (484)
T 3o0h_A 317 NVSHIWAVGDVTGHIQLTPVAIHDAMCFVKNAFEN 351 (484)
T ss_dssp SSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHC-
T ss_pred CCCCEEEEEecCCCCcCHHHHHHHHHHHHHHHcCC
Confidence 4689999999865443 468999999999999753
No 275
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=29.15 E-value=43 Score=29.15 Aligned_cols=31 Identities=19% Similarity=0.154 Sum_probs=26.0
Q ss_pred CCeEEeecccC------CCchhHHHHHHHHHHHHHHH
Q 021616 272 QGLFLGGNYVA------GVALGRCVESAYEVASEVSN 302 (310)
Q Consensus 272 ~~l~~aG~~~~------g~gv~~ai~sG~~aA~~i~~ 302 (310)
+++.++||..+ |-|++.|+.+|..+|+.|..
T Consensus 262 grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~ 298 (381)
T 3c4a_A 262 GKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCT 298 (381)
T ss_dssp TTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhc
Confidence 68999999843 66789999999999988854
No 276
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=28.67 E-value=53 Score=30.80 Aligned_cols=49 Identities=12% Similarity=0.110 Sum_probs=32.7
Q ss_pred ceeeCceeeeEEEcC--CCcEEEEEECCCCe-EEEec-CEEEEcCCchHHHhc
Q 021616 70 KVKLSWKLSGVKKLD--SGEYSLTYETPEGL-VSLRS-RSVVMTVPSYVASSL 118 (310)
Q Consensus 70 ~i~~~~~V~~I~~~~--~~~~~v~~~~~~g~-~~~~a-d~VI~a~p~~~~~~l 118 (310)
+|.+++.|++|..++ +....|.+...+|. .++.| +.||+++-.-...+|
T Consensus 222 ~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~l 274 (577)
T 3q9t_A 222 TIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKL 274 (577)
T ss_dssp EEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHH
T ss_pred EEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHH
Confidence 799999999999873 32234555434353 35677 469999877655544
No 277
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=28.67 E-value=1.1e+02 Score=25.21 Aligned_cols=51 Identities=14% Similarity=0.160 Sum_probs=30.8
Q ss_pred HHHHHHHHHhc--cceeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCc
Q 021616 58 MLPEAISKRLG--SKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 112 (310)
Q Consensus 58 ~L~~~L~~~l~--~~i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~ 112 (310)
.|.+.+.+.+. ........|..+....+. ..+.. .++ .++.+|+||+||-.
T Consensus 67 ~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~--~~~-~~~~~~~liiATG~ 119 (314)
T 4a5l_A 67 ELMMNMRTQSEKYGTTIITETIDHVDFSTQP-FKLFT--EEG-KEVLTKSVIIATGA 119 (314)
T ss_dssp HHHHHHHHHHHHTTCEEECCCEEEEECSSSS-EEEEE--TTC-CEEEEEEEEECCCE
T ss_pred HHHHHHHHHHhhcCcEEEEeEEEEeecCCCc-eEEEE--CCC-eEEEEeEEEEcccc
Confidence 35555544432 123344556667666664 55554 455 47999999999865
No 278
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=28.32 E-value=48 Score=29.93 Aligned_cols=34 Identities=9% Similarity=0.256 Sum_probs=27.2
Q ss_pred CCCCeEEeecccCCCc-hhHHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSNF 303 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g-v~~ai~sG~~aA~~i~~~ 303 (310)
..++||.+||-..+.. ...|+.+|+.+|+.|+..
T Consensus 322 ~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 322 NVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp SSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEEecCCCCccHhHHHHHHHHHHHHHcCC
Confidence 4589999999875433 578999999999998754
No 279
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=27.93 E-value=49 Score=29.79 Aligned_cols=34 Identities=12% Similarity=0.112 Sum_probs=27.3
Q ss_pred CCCCeEEeecccCCCc-hhHHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSNF 303 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g-v~~ai~sG~~aA~~i~~~ 303 (310)
..++||.+||...+.. ...|+.+|+.||+.|+..
T Consensus 299 ~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 299 NIPNVFATGDANGLAPYYHAAVRMSIAAANNIMAN 333 (466)
T ss_dssp SSTTEEECGGGTCSCCSHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEecCCCCccHhHHHHHHHHHHHHHhCC
Confidence 4589999999865433 477999999999999853
No 280
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=27.70 E-value=50 Score=29.58 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=26.8
Q ss_pred CCCCeEEeecccCCCc-hhHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSN 302 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g-v~~ai~sG~~aA~~i~~ 302 (310)
..++||.+||...+.. ...|+.+|+.+|+.|..
T Consensus 294 ~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 327 (450)
T 1ges_A 294 NIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFN 327 (450)
T ss_dssp SSTTEEECSGGGTSCCCHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcC
Confidence 4589999999865433 57899999999999975
No 281
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=27.21 E-value=52 Score=29.77 Aligned_cols=33 Identities=9% Similarity=0.173 Sum_probs=26.7
Q ss_pred CCCCeEEeecccCCC-chhHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAGV-ALGRCVESAYEVASEVSN 302 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~-gv~~ai~sG~~aA~~i~~ 302 (310)
..++||.+||-..+. ....|+.+|+.+|+.|+.
T Consensus 313 ~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 346 (479)
T 2hqm_A 313 NVPNIYSLGDVVGKVELTPVAIAAGRKLSNRLFG 346 (479)
T ss_dssp SSTTEEECGGGTTSSCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEEecCCCcccHHHHHHHHHHHHHHhcC
Confidence 468999999986543 357899999999999875
No 282
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=27.06 E-value=55 Score=29.48 Aligned_cols=34 Identities=9% Similarity=0.079 Sum_probs=27.4
Q ss_pred CCCCeEEeecccCCCc-hhHHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSNF 303 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g-v~~ai~sG~~aA~~i~~~ 303 (310)
..++||.+||-..+.. ...|+.+|+.+|+.|...
T Consensus 316 ~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 350 (478)
T 1v59_A 316 KFPHIKVVGDVTFGPMLAHKAEEEGIAAVEMLKTG 350 (478)
T ss_dssp SSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEeeccCCCcccHHHHHHHHHHHHHHHcCC
Confidence 4689999999866543 467999999999999863
No 283
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=26.98 E-value=90 Score=31.29 Aligned_cols=47 Identities=6% Similarity=-0.043 Sum_probs=32.0
Q ss_pred HhccceeeCceeeeEEEc-CCCcEEEEEEC--C---CC-eEEEecCEEEEcCCc
Q 021616 66 RLGSKVKLSWKLSGVKKL-DSGEYSLTYET--P---EG-LVSLRSRSVVMTVPS 112 (310)
Q Consensus 66 ~l~~~i~~~~~V~~I~~~-~~~~~~v~~~~--~---~g-~~~~~ad~VI~a~p~ 112 (310)
..+.+|++++.|++|... +++...|++.+ . +| .+++.+|.||+++..
T Consensus 328 ~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~ 381 (965)
T 2gag_A 328 ADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGF 381 (965)
T ss_dssp HTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCE
T ss_pred hCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCc
Confidence 345689999999999874 33322455532 1 24 257899999999764
No 284
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=26.94 E-value=53 Score=29.48 Aligned_cols=33 Identities=6% Similarity=0.015 Sum_probs=26.9
Q ss_pred CCCCeEEeecccCCCc-hhHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSN 302 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g-v~~ai~sG~~aA~~i~~ 302 (310)
..++||.+||-..+.. ...|+.+|+.+|+.|..
T Consensus 300 ~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 300 NVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIAG 333 (464)
T ss_dssp SSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEeECcCCCccCHHHHHHHHHHHHHHhcC
Confidence 4589999999866544 46789999999999975
No 285
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=26.63 E-value=44 Score=29.36 Aligned_cols=31 Identities=13% Similarity=0.197 Sum_probs=26.1
Q ss_pred CCeEEeeccc------CCCchhHHHHHHHHHHHHHHH
Q 021616 272 QGLFLGGNYV------AGVALGRCVESAYEVASEVSN 302 (310)
Q Consensus 272 ~~l~~aG~~~------~g~gv~~ai~sG~~aA~~i~~ 302 (310)
+++.++||.. .|-|++.|+.+|..+|+.|..
T Consensus 303 grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~ 339 (410)
T 3c96_A 303 GRITLLGDAAHLMYPMGANGASQAILDGIELAAALAR 339 (410)
T ss_dssp TTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhc
Confidence 6899999973 367899999999999988864
No 286
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=26.36 E-value=50 Score=28.84 Aligned_cols=31 Identities=13% Similarity=0.175 Sum_probs=25.5
Q ss_pred CCeEEeecccC------CCchhHHHHHHHHHHHHHHH
Q 021616 272 QGLFLGGNYVA------GVALGRCVESAYEVASEVSN 302 (310)
Q Consensus 272 ~~l~~aG~~~~------g~gv~~ai~sG~~aA~~i~~ 302 (310)
+++.++||..| |-|++.|+..|...|+.|..
T Consensus 299 grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~ 335 (397)
T 2vou_A 299 GRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTK 335 (397)
T ss_dssp TTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhc
Confidence 68999999854 66788999999988887753
No 287
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=26.13 E-value=54 Score=29.29 Aligned_cols=38 Identities=8% Similarity=0.023 Sum_probs=24.2
Q ss_pred eeeCceeeeEEEcCCCcEEEEEECCCCeEEEecCEEEEcCCch
Q 021616 71 VKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 113 (310)
Q Consensus 71 i~~~~~V~~I~~~~~~~~~v~~~~~~g~~~~~ad~VI~a~p~~ 113 (310)
|.++..|++|...++ .|++ .+|+..+.+|.||+|+-..
T Consensus 254 i~~~~~v~~~~~~~~---~v~~--~dG~~~~~~D~vi~atG~~ 291 (447)
T 2gv8_A 254 LQQVPEITKFDPTTR---EIYL--KGGKVLSNIDRVIYCTGYL 291 (447)
T ss_dssp EEEECCEEEEETTTT---EEEE--TTTEEECCCSEEEECCCBC
T ss_pred eEEecCeEEEecCCC---EEEE--CCCCEeccCCEEEECCCCC
Confidence 445566777653332 4555 5785347899999998654
No 288
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=25.65 E-value=43 Score=31.54 Aligned_cols=35 Identities=20% Similarity=0.213 Sum_probs=26.8
Q ss_pred CCCCeEEeeccc----CC------CchhHHHHHHHHHHHHHHHHh
Q 021616 270 GYQGLFLGGNYV----AG------VALGRCVESAYEVASEVSNFL 304 (310)
Q Consensus 270 ~~~~l~~aG~~~----~g------~gv~~ai~sG~~aA~~i~~~l 304 (310)
+.+|||-||+-. +| .++.+|+..|+.|++.+.+.+
T Consensus 371 ~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~ 415 (602)
T 1kf6_A 371 RIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERA 415 (602)
T ss_dssp SSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHHHhh
Confidence 468999999952 22 236789999999999887664
No 289
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=25.34 E-value=50 Score=29.77 Aligned_cols=38 Identities=11% Similarity=0.110 Sum_probs=25.5
Q ss_pred hhhcCCCCeEEeecccCCCchhHHHHHHHHHHHHHHHH
Q 021616 266 LRDNGYQGLFLGGNYVAGVALGRCVESAYEVASEVSNF 303 (310)
Q Consensus 266 ~~~~~~~~l~~aG~~~~g~gv~~ai~sG~~aA~~i~~~ 303 (310)
++....+||||||+-..-.|.+.|..+|..|+..+...
T Consensus 323 le~k~~~~Lf~AGqi~G~~Gy~eAaa~Gl~AG~naa~~ 360 (443)
T 3g5s_A 323 LEFREAEGLYAAGVLAGVEGYLESAATGFLAGLNAARK 360 (443)
T ss_dssp SEETTEEEEEECGGGGTBCSHHHHHHHHHHHHHHHHHH
T ss_pred ceecCCCCEEECccccccHHHHHHHHhHHHHHHHHHHH
Confidence 44323579999999865456677777777776555443
No 290
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=25.25 E-value=58 Score=29.31 Aligned_cols=33 Identities=9% Similarity=0.168 Sum_probs=26.6
Q ss_pred CCCCeEEeecccCCCc-hhHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSN 302 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g-v~~ai~sG~~aA~~i~~ 302 (310)
..++||.+||...+.. ...|+.+|+.+|+.|..
T Consensus 293 ~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g 326 (463)
T 2r9z_A 293 NVPGVYALGDITGRDQLTPVAIAAGRRLAERLFD 326 (463)
T ss_dssp SSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcC
Confidence 3589999999865433 57789999999999874
No 291
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=25.17 E-value=51 Score=29.60 Aligned_cols=33 Identities=12% Similarity=0.260 Sum_probs=26.7
Q ss_pred CCCCeEEeecccCCCc-hhHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSN 302 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g-v~~ai~sG~~aA~~i~~ 302 (310)
..++||.+||...+.. ...|+.+|+.||..|..
T Consensus 308 ~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g 341 (470)
T 1dxl_A 308 NVSGVYAIGDVIPGPMLAHKAEEDGVACVEYLAG 341 (470)
T ss_dssp SSTTEEECSTTSSSCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcC
Confidence 4689999999865544 46789999999999875
No 292
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=25.11 E-value=53 Score=30.79 Aligned_cols=50 Identities=8% Similarity=0.118 Sum_probs=33.2
Q ss_pred cceeeCceeeeEEEcCC---C-cEEEEEECCCCe-EEEec-CEEEEcCCchHHHhc
Q 021616 69 SKVKLSWKLSGVKKLDS---G-EYSLTYETPEGL-VSLRS-RSVVMTVPSYVASSL 118 (310)
Q Consensus 69 ~~i~~~~~V~~I~~~~~---~-~~~v~~~~~~g~-~~~~a-d~VI~a~p~~~~~~l 118 (310)
.+|++++.|++|..+++ + ...|.+.+.+|. .++.| +.||+|+-.-...+|
T Consensus 246 l~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~l 301 (587)
T 1gpe_A 246 LEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLI 301 (587)
T ss_dssp EEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHH
T ss_pred cEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHH
Confidence 38999999999987642 1 234544323453 35778 889999887555444
No 293
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=24.64 E-value=51 Score=31.51 Aligned_cols=35 Identities=20% Similarity=0.318 Sum_probs=26.8
Q ss_pred CCCCeEEeecc----cCC------CchhHHHHHHHHHHHHHHHHh
Q 021616 270 GYQGLFLGGNY----VAG------VALGRCVESAYEVASEVSNFL 304 (310)
Q Consensus 270 ~~~~l~~aG~~----~~g------~gv~~ai~sG~~aA~~i~~~l 304 (310)
+.+|||-||+. ++| .++.+|+..|+.|++.+.+..
T Consensus 384 ~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~ 428 (660)
T 2bs2_A 384 KLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHC 428 (660)
T ss_dssp SSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 46899999994 222 346789999999999887655
No 294
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=24.39 E-value=63 Score=30.76 Aligned_cols=37 Identities=16% Similarity=0.269 Sum_probs=25.3
Q ss_pred hhhcCCCCeEEeecccCCCchhHHHHHHHHHHHHHHH
Q 021616 266 LRDNGYQGLFLGGNYVAGVALGRCVESAYEVASEVSN 302 (310)
Q Consensus 266 ~~~~~~~~l~~aG~~~~g~gv~~ai~sG~~aA~~i~~ 302 (310)
++....+||||||+-..-.|-++|..+|..|+-....
T Consensus 384 Le~k~~~gLf~AGqinGt~GyeEAaaqGl~AG~nAa~ 420 (637)
T 2zxi_A 384 LETKKIRGLFHAGNFNGTTGYEEAAGQGIVAGINAAL 420 (637)
T ss_dssp SBBSSSBTEEECGGGGTBCSHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCEEEeeecCCcchHHHHHHHHHHHHHHHHH
Confidence 4432458999999976556677887777776655443
No 295
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=23.99 E-value=69 Score=28.93 Aligned_cols=34 Identities=12% Similarity=0.083 Sum_probs=26.9
Q ss_pred CCCCeEEeecccCC-C-chhHHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAG-V-ALGRCVESAYEVASEVSNF 303 (310)
Q Consensus 270 ~~~~l~~aG~~~~g-~-gv~~ai~sG~~aA~~i~~~ 303 (310)
..++||.+||...| . ....|+.+|+.+|+.|+..
T Consensus 317 ~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~ 352 (483)
T 3dgh_A 317 NVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGG 352 (483)
T ss_dssp SSTTEEECSTTBTTSCCCHHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEEcccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 46899999998643 3 3578999999999998753
No 296
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=23.98 E-value=62 Score=29.48 Aligned_cols=33 Identities=6% Similarity=0.113 Sum_probs=26.9
Q ss_pred CCCCeEEeecccCCCc-hhHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSN 302 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g-v~~ai~sG~~aA~~i~~ 302 (310)
..++||.+||-..+.. ...|+.+|+.+|+.|+.
T Consensus 321 ~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 321 NVPNIYAIGDITDRLMLTPVAINEGAALVDTVFG 354 (495)
T ss_dssp SSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcC
Confidence 4589999999876443 57899999999999875
No 297
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=23.71 E-value=97 Score=26.91 Aligned_cols=28 Identities=4% Similarity=0.096 Sum_probs=19.2
Q ss_pred hHHHHHHHHHh----ccceeeCceeeeEEEcC
Q 021616 57 TMLPEAISKRL----GSKVKLSWKLSGVKKLD 84 (310)
Q Consensus 57 ~~L~~~L~~~l----~~~i~~~~~V~~I~~~~ 84 (310)
..+.+.|.+.+ +.+++.++.|+.|...+
T Consensus 160 ~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~ 191 (344)
T 3jsk_A 160 ALFTSTVLSKVLQRPNVKLFNATTVEDLITRK 191 (344)
T ss_dssp HHHHHHHHHHHHTCTTEEEEETEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEeCCEEEEEEecC
Confidence 34455555543 34799999999998765
No 298
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=23.68 E-value=55 Score=29.47 Aligned_cols=34 Identities=12% Similarity=0.142 Sum_probs=27.2
Q ss_pred CCCCeEEeecccCCCc-hhHHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSNF 303 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g-v~~ai~sG~~aA~~i~~~ 303 (310)
..++||.+||-..+.. ...|+.+|+.+|+.|...
T Consensus 311 ~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 345 (474)
T 1zmd_A 311 KIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGG 345 (474)
T ss_dssp SSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEeeecCCCCccHHHHHHHHHHHHHHhcCC
Confidence 4589999999866544 467899999999998753
No 299
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=23.68 E-value=61 Score=28.11 Aligned_cols=33 Identities=15% Similarity=0.155 Sum_probs=27.5
Q ss_pred CCeEEeecccC------CCchhHHHHHHHHHHHHHHHHh
Q 021616 272 QGLFLGGNYVA------GVALGRCVESAYEVASEVSNFL 304 (310)
Q Consensus 272 ~~l~~aG~~~~------g~gv~~ai~sG~~aA~~i~~~l 304 (310)
+++.++||..+ |-|++-|+.+|..+|+.|...+
T Consensus 279 grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~ 317 (394)
T 1k0i_A 279 GRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAY 317 (394)
T ss_dssp TTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHh
Confidence 68999999843 6788999999999999987643
No 300
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=23.63 E-value=64 Score=29.33 Aligned_cols=33 Identities=9% Similarity=0.112 Sum_probs=27.0
Q ss_pred CCCCeEEeecccCCCc-hhHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSN 302 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g-v~~ai~sG~~aA~~i~~ 302 (310)
..++||.+||-..+.. ...|+.+|+.+|+.|..
T Consensus 317 ~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 317 NVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp SSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcC
Confidence 4589999999876443 57899999999999875
No 301
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=23.23 E-value=53 Score=28.70 Aligned_cols=30 Identities=13% Similarity=0.241 Sum_probs=25.6
Q ss_pred CeEEeeccc------CCCchhHHHHHHHHHHHHHHH
Q 021616 273 GLFLGGNYV------AGVALGRCVESAYEVASEVSN 302 (310)
Q Consensus 273 ~l~~aG~~~------~g~gv~~ai~sG~~aA~~i~~ 302 (310)
++.++||.. .|-|++.|+..|..+|+.|..
T Consensus 315 rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~ 350 (398)
T 2xdo_A 315 PITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLAD 350 (398)
T ss_dssp CEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHS
T ss_pred cEEEEeehhccCCCccCccHHHHHHHHHHHHHHHHh
Confidence 899999973 377899999999999998854
No 302
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=22.96 E-value=60 Score=29.23 Aligned_cols=33 Identities=9% Similarity=0.146 Sum_probs=26.5
Q ss_pred CCCCeEEeecccCCCc-hhHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSN 302 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g-v~~ai~sG~~aA~~i~~ 302 (310)
..++||.+||-..+.. ...|+.+|+.+|+.|..
T Consensus 300 ~~~~Iya~GD~~~~~~l~~~A~~~g~~aa~~i~g 333 (464)
T 2eq6_A 300 SVPGVYAIGDAARPPLLAHKAMREGLIAAENAAG 333 (464)
T ss_dssp SSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcC
Confidence 3589999999865443 46789999999999875
No 303
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=22.78 E-value=75 Score=29.65 Aligned_cols=34 Identities=12% Similarity=0.070 Sum_probs=27.1
Q ss_pred CCCCeEEeecccCC-C-chhHHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAG-V-ALGRCVESAYEVASEVSNF 303 (310)
Q Consensus 270 ~~~~l~~aG~~~~g-~-gv~~ai~sG~~aA~~i~~~ 303 (310)
..++||.+||...+ . ....|+.+|+.+|+.|+..
T Consensus 424 s~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 424 TVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp SSTTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEeeecCCCCccHHHHHHhHHHHHHHHhcC
Confidence 46899999998443 2 3578999999999999764
No 304
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=22.65 E-value=76 Score=28.35 Aligned_cols=34 Identities=12% Similarity=0.128 Sum_probs=27.1
Q ss_pred CCCCeEEeecccCCCc-hhHHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSNF 303 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g-v~~ai~sG~~aA~~i~~~ 303 (310)
..++||.+||-..+.. ...|..+|+.+|+.|...
T Consensus 293 ~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 327 (455)
T 2yqu_A 293 RVPHIYAIGDVVRGPMLAHKASEEGIAAVEHMVRG 327 (455)
T ss_dssp SSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEecCCCCccCHHHHHHhHHHHHHHHcCC
Confidence 3589999999866544 456899999999999863
No 305
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=21.67 E-value=62 Score=29.07 Aligned_cols=33 Identities=12% Similarity=0.203 Sum_probs=26.7
Q ss_pred CCCCeEEeecccC-CCc-hhHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVA-GVA-LGRCVESAYEVASEVSN 302 (310)
Q Consensus 270 ~~~~l~~aG~~~~-g~g-v~~ai~sG~~aA~~i~~ 302 (310)
..++||.+||... +.. ...|+.+|+.+|+.|..
T Consensus 305 ~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 339 (468)
T 2qae_A 305 SIPDVYAIGDVVDKGPMLAHKAEDEGVACAEILAG 339 (468)
T ss_dssp SSTTEEECGGGBSSSCSCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEeeccCCCCCccHhHHHHHHHHHHHHHcC
Confidence 4589999999866 443 46789999999999875
No 306
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=21.58 E-value=77 Score=28.66 Aligned_cols=34 Identities=9% Similarity=0.106 Sum_probs=26.7
Q ss_pred CCCCeEEeecccCC-C-chhHHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAG-V-ALGRCVESAYEVASEVSNF 303 (310)
Q Consensus 270 ~~~~l~~aG~~~~g-~-gv~~ai~sG~~aA~~i~~~ 303 (310)
..++||.+||-..+ . ....|+.+|+.+|+.|+..
T Consensus 317 ~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~ 352 (488)
T 3dgz_A 317 SVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGK 352 (488)
T ss_dssp SSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEeEEecCCCCcchhHHHHHHHHHHHHHcCC
Confidence 46899999998633 3 3578999999999998753
No 307
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=21.39 E-value=55 Score=30.30 Aligned_cols=33 Identities=21% Similarity=0.363 Sum_probs=27.0
Q ss_pred CCeEEeecccC------CCchhHHHHHHHHHHHHHHHHh
Q 021616 272 QGLFLGGNYVA------GVALGRCVESAYEVASEVSNFL 304 (310)
Q Consensus 272 ~~l~~aG~~~~------g~gv~~ai~sG~~aA~~i~~~l 304 (310)
++++++||..| |-|++.+|..+...|..|...+
T Consensus 309 grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l 347 (549)
T 2r0c_A 309 GRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATL 347 (549)
T ss_dssp TTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEccccccCCCccCCccccccHHHHHHHHHHHHHH
Confidence 68999999843 5678899999999998887654
No 308
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=21.33 E-value=77 Score=29.05 Aligned_cols=33 Identities=9% Similarity=0.128 Sum_probs=26.4
Q ss_pred CCCCeEEeecccCC-Cc-hhHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAG-VA-LGRCVESAYEVASEVSN 302 (310)
Q Consensus 270 ~~~~l~~aG~~~~g-~g-v~~ai~sG~~aA~~i~~ 302 (310)
..++||.+||-..+ .. ...|+.+|+.+|+.|+.
T Consensus 345 s~~~IyA~GD~~~g~~~~~~~A~~~g~~aa~~i~g 379 (519)
T 3qfa_A 345 NVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYA 379 (519)
T ss_dssp SSTTEEECGGGBSSSCCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEEeccCCCCccHHHHHHHHHHHHHHHcC
Confidence 46899999998633 33 57899999999999874
No 309
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=21.29 E-value=30 Score=33.45 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=28.1
Q ss_pred CCCCeEEeecccCCCchhHHHHHHHHHHHHHHHHh
Q 021616 270 GYQGLFLGGNYVAGVALGRCVESAYEVASEVSNFL 304 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~gv~~ai~sG~~aA~~i~~~l 304 (310)
..++||.+||......+..|+.+|+.||..|...+
T Consensus 665 ~~~~VyAiGD~~~~~~~~~A~~~G~~aA~~i~~~l 699 (729)
T 1o94_A 665 DIKGIYLIGDAEAPRLIADATFTGHRVAREIEEAN 699 (729)
T ss_dssp TCCEEEECGGGTSCCCHHHHHHHHHHHHHTTTSSC
T ss_pred CCCCeEEEeCccchhhHHHHHHHHHHHHHHhhhhc
Confidence 45899999997654457789999999999987644
No 310
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=21.26 E-value=65 Score=29.10 Aligned_cols=33 Identities=12% Similarity=0.149 Sum_probs=26.7
Q ss_pred CCCCeEEeecccCCCc-hhHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSN 302 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g-v~~ai~sG~~aA~~i~~ 302 (310)
..++||.+||-..+.. ...|+.+|+.+|+.|..
T Consensus 315 ~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 315 NVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp SSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEcccCCCccHHHHHHHHHHHHHHHcC
Confidence 4589999999866443 46799999999999875
No 311
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=21.20 E-value=54 Score=28.76 Aligned_cols=34 Identities=6% Similarity=0.099 Sum_probs=26.3
Q ss_pred CCCCeEEeecccC--C--C-chhHHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVA--G--V-ALGRCVESAYEVASEVSNF 303 (310)
Q Consensus 270 ~~~~l~~aG~~~~--g--~-gv~~ai~sG~~aA~~i~~~ 303 (310)
..++||.+||... + . ....|+.+|+.||..|+..
T Consensus 256 ~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~ 294 (385)
T 3klj_A 256 SIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGE 294 (385)
T ss_dssp SSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcCC
Confidence 4689999999743 1 2 2578999999999998753
No 312
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=20.77 E-value=86 Score=28.23 Aligned_cols=33 Identities=9% Similarity=-0.011 Sum_probs=25.6
Q ss_pred CCCCeEEeecccCCCchhHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAGVALGRCVESAYEVASEVSN 302 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~gv~~ai~sG~~aA~~i~~ 302 (310)
..|+||++||-..+.....+-.+|+.+|..|..
T Consensus 306 ~~p~i~aiGd~~~~~~~~~a~~qa~~~a~~l~G 338 (464)
T 2xve_A 306 DNPKFFYIGMQDQWYSFNMFDAQAWYARDVIMG 338 (464)
T ss_dssp SSTTEEECSCSCCSSCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeCcccccchHHHHHHHHHHHHHHcC
Confidence 358999999976555567788888888887754
No 313
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=20.70 E-value=2.1e+02 Score=24.57 Aligned_cols=27 Identities=4% Similarity=0.014 Sum_probs=18.7
Q ss_pred HHHHHHHHHh----ccceeeCceeeeEEEcC
Q 021616 58 MLPEAISKRL----GSKVKLSWKLSGVKKLD 84 (310)
Q Consensus 58 ~L~~~L~~~l----~~~i~~~~~V~~I~~~~ 84 (310)
.+...|.+.+ +.+++.+++|++|..++
T Consensus 147 ~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~ 177 (326)
T 2gjc_A 147 LFISTVLSKVLQLPNVKLFNATCVEDLVTRP 177 (326)
T ss_dssp HHHHHHHHHHHTSTTEEEETTEEEEEEEECC
T ss_pred HHHHHHHHHHHHhcCcEEEecceeeeeeecc
Confidence 4455555443 34789999999998874
No 314
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=20.52 E-value=78 Score=28.88 Aligned_cols=33 Identities=24% Similarity=0.243 Sum_probs=27.7
Q ss_pred CCeEEeeccc------CCCchhHHHHHHHHHHHHHHHHh
Q 021616 272 QGLFLGGNYV------AGVALGRCVESAYEVASEVSNFL 304 (310)
Q Consensus 272 ~~l~~aG~~~------~g~gv~~ai~sG~~aA~~i~~~l 304 (310)
+|+.++||.. .|-|++.|+.+|..+|+.|...+
T Consensus 296 ~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~L~~~l 334 (512)
T 3e1t_A 296 NGMALVGDAACFVDPVFSSGVHLATYSALLVARAINTCL 334 (512)
T ss_dssp SSEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEechhhcCCCccccCHHHHHHHHHHHHHHHHHHH
Confidence 6899999983 36789999999999999887654
No 315
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=20.46 E-value=68 Score=29.14 Aligned_cols=33 Identities=6% Similarity=0.023 Sum_probs=26.8
Q ss_pred CCCCeEEeecccCCCc-hhHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSN 302 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g-v~~ai~sG~~aA~~i~~ 302 (310)
..++||.+||-..+.. ...|+.+|+.+|+.|..
T Consensus 308 ~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g 341 (499)
T 1xdi_A 308 LATGIYAAGDCTGLLPLASVAAMQGRIAMYHALG 341 (499)
T ss_dssp SSTTEEECSGGGTSCSCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcC
Confidence 4689999999866544 46799999999999875
No 316
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=20.37 E-value=80 Score=28.30 Aligned_cols=33 Identities=12% Similarity=0.150 Sum_probs=26.7
Q ss_pred CCCCeEEeecccCCCc-hhHHHHHHHHHHHHHHH
Q 021616 270 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSN 302 (310)
Q Consensus 270 ~~~~l~~aG~~~~g~g-v~~ai~sG~~aA~~i~~ 302 (310)
..++||.+||-..+.. ...|..+|+.+|+.|..
T Consensus 296 ~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g 329 (458)
T 1lvl_A 296 SMHNVWAIGDVAGEPMLAHRAMAQGEMVAEIIAG 329 (458)
T ss_dssp SSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEeeccCCCcccHHHHHHHHHHHHHHhcC
Confidence 4589999999876544 46789999999999874
Done!