Query 021617
Match_columns 310
No_of_seqs 217 out of 372
Neff 5.6
Searched_HMMs 13730
Date Mon Mar 25 06:46:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021617.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021617hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1k1fa_ a.147.1.1 (A:) Bcr-Abl 44.3 13 0.00096 25.3 4.1 21 85-105 31-51 (67)
2 d1q08a_ a.6.1.3 (A:) Transcrip 30.5 22 0.0016 25.1 3.8 26 81-106 43-68 (94)
3 d2azeb1 e.63.1.2 (B:201-301) T 28.0 44 0.0032 24.2 5.2 26 79-104 3-28 (101)
4 d2b7ta1 d.50.1.1 (A:1-73) dsRN 19.7 13 0.00094 25.3 0.5 21 288-308 47-68 (73)
5 d2e74e1 f.23.24.1 (E:1-32) Pet 16.9 50 0.0036 18.7 2.5 12 217-228 11-22 (32)
6 d2azea1 e.63.1.1 (A:199-346) T 16.1 72 0.0053 24.8 4.3 18 81-98 10-27 (148)
7 d1nkpa_ a.38.1.1 (A:) Myc prot 14.2 1.3E+02 0.0092 20.4 4.9 25 81-105 56-80 (88)
8 d2b7va1 d.50.1.1 (A:1-71) dsRN 14.1 21 0.0016 24.0 0.5 21 288-308 44-65 (71)
9 d2azea1 e.63.1.1 (A:199-346) T 13.6 87 0.0064 24.3 4.1 26 80-105 2-27 (148)
10 d1nlwa_ a.38.1.1 (A:) Mad prot 11.2 1.4E+02 0.01 19.7 4.3 25 81-105 51-75 (79)
No 1
>d1k1fa_ a.147.1.1 (A:) Bcr-Abl oncoprotein oligomerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.34 E-value=13 Score=25.32 Aligned_cols=21 Identities=43% Similarity=0.624 Sum_probs=16.5
Q ss_pred hHHHHHHHHHHHHHHHHhhHH
Q 021617 85 KEKELQAKEAELRRREQDVRR 105 (310)
Q Consensus 85 k~~EL~~kE~EL~rRE~eL~~ 105 (310)
-|+||++....|+|.|+++.+
T Consensus 31 iE~eLerCk~~irrLeqel~~ 51 (67)
T d1k1fa_ 31 IEQELERAKASIRRLEQEVNQ 51 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 567888888888888888853
No 2
>d1q08a_ a.6.1.3 (A:) Transcriptional regulator ZntR {Escherichia coli [TaxId: 562]}
Probab=30.51 E-value=22 Score=25.12 Aligned_cols=26 Identities=23% Similarity=0.396 Sum_probs=20.5
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhhHHH
Q 021617 81 DLKKKEKELQAKEAELRRREQDVRRK 106 (310)
Q Consensus 81 ~l~~k~~EL~~kE~EL~rRE~eL~~r 106 (310)
-+.+|-+|+++|-+||++.+++|+.-
T Consensus 43 l~~~kl~~i~~kI~~L~~l~~~L~~l 68 (94)
T d1q08a_ 43 IVQERLQEVEARIAELQSMQRSLQRL 68 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35778888888888888888888753
No 3
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.98 E-value=44 Score=24.21 Aligned_cols=26 Identities=19% Similarity=0.198 Sum_probs=17.9
Q ss_pred hHHHHHhHHHHHHHHHHHHHHHHhhH
Q 021617 79 AADLKKKEKELQAKEAELRRREQDVR 104 (310)
Q Consensus 79 ~~~l~~k~~EL~~kE~EL~rRE~eL~ 104 (310)
.+.|++--++|+++|++|++.-+.++
T Consensus 3 ~~~L~~El~~L~~~E~~LD~li~~~~ 28 (101)
T d2azeb1 3 LEGLTQDLRQLQESEQQLDHLMNICT 28 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677777788888888887654443
No 4
>d2b7ta1 d.50.1.1 (A:1-73) dsRNA-specific editase 1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=19.72 E-value=13 Score=25.28 Aligned_cols=21 Identities=43% Similarity=0.626 Sum_probs=15.7
Q ss_pred HcCCChH-HHHHHHHHhhHHhh
Q 021617 288 FRGSGKA-AEMKREAARGAMRA 308 (310)
Q Consensus 288 yR~~G~s-~~a~~e~a~~~~~~ 308 (310)
|+|+|.| .+||+++|..++++
T Consensus 47 ~~g~G~SKK~Aeq~AA~~aL~~ 68 (73)
T d2b7ta1 47 FEGSGPTKKKAKLHAAEKALRS 68 (73)
T ss_dssp EEEEESSHHHHHHHHHHHHHHH
T ss_pred EEcCCCcHHHHHHHHHHHHHHH
Confidence 4677777 45888888888775
No 5
>d2e74e1 f.23.24.1 (E:1-32) PetL subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=16.88 E-value=50 Score=18.73 Aligned_cols=12 Identities=25% Similarity=0.465 Sum_probs=4.6
Q ss_pred HHHHHHHHHHHh
Q 021617 217 FLFYLLHIGFCI 228 (310)
Q Consensus 217 F~~~~~~i~f~v 228 (310)
|+..++.++.-+
T Consensus 11 fialffgiavgi 22 (32)
T d2e74e1 11 FIALFFGIAVGI 22 (32)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhhh
Confidence 333334443333
No 6
>d2azea1 e.63.1.1 (A:199-346) Transcription factor DP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.12 E-value=72 Score=24.76 Aligned_cols=18 Identities=11% Similarity=0.444 Sum_probs=10.3
Q ss_pred HHHHhHHHHHHHHHHHHH
Q 021617 81 DLKKKEKELQAKEAELRR 98 (310)
Q Consensus 81 ~l~~k~~EL~~kE~EL~r 98 (310)
|.+++.+++++|.++|++
T Consensus 10 E~~~~~erI~~K~~~Lqe 27 (148)
T d2azea1 10 ERQRRLERIKQKQSQLQE 27 (148)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 445555566666666654
No 7
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.22 E-value=1.3e+02 Score=20.37 Aligned_cols=25 Identities=24% Similarity=0.534 Sum_probs=12.1
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhhHH
Q 021617 81 DLKKKEKELQAKEAELRRREQDVRR 105 (310)
Q Consensus 81 ~l~~k~~EL~~kE~EL~rRE~eL~~ 105 (310)
.|+++.++|....++|+++.++|++
T Consensus 56 ~L~~~~~~l~~~~~~l~~~~~~L~~ 80 (88)
T d1nkpa_ 56 SVQAEEQKLISEEDLLRKRREQLKH 80 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555544455544444443
No 8
>d2b7va1 d.50.1.1 (A:1-71) dsRNA-specific editase 1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=14.06 E-value=21 Score=23.95 Aligned_cols=21 Identities=38% Similarity=0.575 Sum_probs=15.0
Q ss_pred HcCCChH-HHHHHHHHhhHHhh
Q 021617 288 FRGSGKA-AEMKREAARGAMRA 308 (310)
Q Consensus 288 yR~~G~s-~~a~~e~a~~~~~~ 308 (310)
|.++|.| .+||+++|.-+++.
T Consensus 44 ~~g~G~SKK~Ak~~AA~~aL~~ 65 (71)
T d2b7va1 44 FEGSGRNKKLAKARAAQSALAT 65 (71)
T ss_dssp EEEEESSHHHHHHHHHHHHHHH
T ss_pred EEecCCCHHHHHHHHHHHHHHH
Confidence 3677777 45888888887763
No 9
>d2azea1 e.63.1.1 (A:199-346) Transcription factor DP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.61 E-value=87 Score=24.26 Aligned_cols=26 Identities=12% Similarity=0.298 Sum_probs=17.7
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHhhHH
Q 021617 80 ADLKKKEKELQAKEAELRRREQDVRR 105 (310)
Q Consensus 80 ~~l~~k~~EL~~kE~EL~rRE~eL~~ 105 (310)
+|.++-++|.++|.+.++++.++|+.
T Consensus 2 Qe~~~Le~E~~~~~erI~~K~~~Lqe 27 (148)
T d2azea1 2 QECQNLEVERQRRLERIKQKQSQLQE 27 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35556667777777777777766654
No 10
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.22 E-value=1.4e+02 Score=19.70 Aligned_cols=25 Identities=16% Similarity=0.441 Sum_probs=12.1
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhhHH
Q 021617 81 DLKKKEKELQAKEAELRRREQDVRR 105 (310)
Q Consensus 81 ~l~~k~~EL~~kE~EL~rRE~eL~~ 105 (310)
+|.++.++|...-++|.+.-++|++
T Consensus 51 ~L~~~~~~l~~~~~~L~~~~~~L~~ 75 (79)
T d1nlwa_ 51 KLEDSDRKAVHQIDQLQREQRHLKR 75 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555444455444444443
Done!