BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021621
(310 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|148906450|gb|ABR16378.1| unknown [Picea sitchensis]
Length = 367
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/375 (54%), Positives = 241/375 (64%), Gaps = 85/375 (22%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M+ N +P+ GY MPAEWE HSQCWMGWP ER DNWR+ A+H QRVF +VA+AISKFE
Sbjct: 1 MDNNASPSEFGYRMPAEWEFHSQCWMGWP---ERPDNWRESAMHGQRVFVEVASAISKFE 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
VTVCASAAQW++AR+QLP+NIRV+EMSMN +WFRD GPT VV ++S VAGI
Sbjct: 58 SVTVCASAAQWDSARAQLPKNIRVLEMSMNDAWFRDIGPTFVVCDRTSS-------VAGI 110
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DW+FNSWGG ++GCY+DWSLD VARKI+ ERL RFPHSMVLEGGSIHVDGEGTC+TTE
Sbjct: 111 DWSFNSWGGAENGCYKDWSLDSLVARKIIEVERLTRFPHSMVLEGGSIHVDGEGTCITTE 170
Query: 181 ECLLNKNRNPHL------------------------------TKGQIEN----------- 199
ECLLN NRNPHL T G I+N
Sbjct: 171 ECLLNPNRNPHLTREAIEHQLKHYLGVTTIIWLPWGLYGDDDTNGHIDNMCCFVRPGVVM 230
Query: 200 --------------ELKAY-------------LGVMKIIWLPRGLFGMIHDGEA------ 226
L+AY L ++KI +P LF + +
Sbjct: 231 LAWTDDENDPQYERSLEAYSVLSKAIDAHGRTLQIIKI-HVPEPLFMTEEEADGLQALDG 289
Query: 227 KPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIV 286
KPR AGTRLAASY+NFYIAN GI+ P FGD+K D EAV VL+ AFP +EV+ + AREIV
Sbjct: 290 KPRNAGTRLAASYINFYIANKGIVAPAFGDEKRDKEAVDVLTAAFPDHEVITVSGAREIV 349
Query: 287 LGGGNIHCITQQQPA 301
LGGGNIHCITQQQPA
Sbjct: 350 LGGGNIHCITQQQPA 364
>gi|225455756|ref|XP_002269435.1| PREDICTED: agmatine deiminase [Vitis vinifera]
gi|297734125|emb|CBI15372.3| unnamed protein product [Vitis vinifera]
Length = 374
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/219 (80%), Positives = 190/219 (86%), Gaps = 3/219 (1%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
ME+ GTPALHGY MPAEWEPHSQCWMGWP ER DNWRD A AQRVFA+VA+AISKFE
Sbjct: 1 MEIEGTPALHGYHMPAEWEPHSQCWMGWP---ERPDNWRDHAGPAQRVFAEVASAISKFE 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
PVTVCASAAQW NARS LP++IRV+EMSM+ SWFRDTGPT VV K + SS A K+AGI
Sbjct: 58 PVTVCASAAQWANARSLLPQHIRVVEMSMDDSWFRDTGPTFVVIKPTPSSAAPVQKIAGI 117
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DWNFNSWGG DDGCY DWSLDL VA+KIL ER+PRFP SM+LEGGSIHVDGEGTCLTTE
Sbjct: 118 DWNFNSWGGYDDGCYNDWSLDLLVAKKILEIERVPRFPQSMILEGGSIHVDGEGTCLTTE 177
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
ECLLNKNRNPHLTK QIE ELK+YLGV K+IWLPRGLFG
Sbjct: 178 ECLLNKNRNPHLTKEQIEAELKSYLGVKKVIWLPRGLFG 216
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 71/84 (84%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G++ D AK R+AGTRLAASYVNFYIANG II P FGD+KWD EAVRVLS AFP +EVVG
Sbjct: 290 GILQDDNAKLRVAGTRLAASYVNFYIANGRIIAPVFGDQKWDDEAVRVLSLAFPNHEVVG 349
Query: 279 IERAREIVLGGGNIHCITQQQPAI 302
I+ AREI L GGNIHCITQQQPAI
Sbjct: 350 IKGAREIALAGGNIHCITQQQPAI 373
>gi|317106658|dbj|BAJ53162.1| JHL10I11.8 [Jatropha curcas]
Length = 378
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/218 (80%), Positives = 191/218 (87%), Gaps = 5/218 (2%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++ GTPA HGY MPAEWEPHS W+GWP ER DNWRD+A+HAQ VFAKVATAISKFEP
Sbjct: 3 DIAGTPAFHGYRMPAEWEPHSHTWIGWP---ERPDNWRDNAVHAQHVFAKVATAISKFEP 59
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VTVCASA+QWE ARS LPE+IRV+EMSMN SWFRDTGPT VVN S++SS Q KVAGID
Sbjct: 60 VTVCASASQWEKARSLLPEHIRVVEMSMNDSWFRDTGPTFVVNASNSSSPGQ--KVAGID 117
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
W FNSWGGVDDGCY+DWSLDL VARKIL E+LPRFPH M+LEGGSIHVDGEGTCLTTEE
Sbjct: 118 WKFNSWGGVDDGCYQDWSLDLLVARKILQIEKLPRFPHFMILEGGSIHVDGEGTCLTTEE 177
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
CLLNKNRNPHLTK QIEN+LK YLGV K+IWLPRGL+G
Sbjct: 178 CLLNKNRNPHLTKEQIENQLKEYLGVQKVIWLPRGLYG 215
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/90 (83%), Positives = 80/90 (88%), Gaps = 1/90 (1%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G+I DGEAKPRL GTRLAASYVNFYIANGGIITPQFGD++ D EAVRVLSQAFP +EVV
Sbjct: 289 GVIQDGEAKPRLPGTRLAASYVNFYIANGGIITPQFGDQERDDEAVRVLSQAFPNHEVVR 348
Query: 279 IERAREIVLGGGNIHCITQQQP-AIPTNAA 307
IE AREIVLGGGNIHCITQQQP A P+N A
Sbjct: 349 IEGAREIVLGGGNIHCITQQQPAAAPSNLA 378
>gi|255541906|ref|XP_002512017.1| Agmatine deiminase, putative [Ricinus communis]
gi|223549197|gb|EEF50686.1| Agmatine deiminase, putative [Ricinus communis]
Length = 377
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/218 (80%), Positives = 189/218 (86%), Gaps = 5/218 (2%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++ GTP LHGY MPAEWEPHSQ WMGWP ER DNWR+ A+HAQ+ F KVATAISKFEP
Sbjct: 3 DLTGTPVLHGYRMPAEWEPHSQTWMGWP---ERPDNWRNSAVHAQQAFVKVATAISKFEP 59
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VTVCAS QWENAR QLPE+I VIEMSMN +WFRDTGPT VVN S+A S Q KVAGID
Sbjct: 60 VTVCASTGQWENARRQLPEHITVIEMSMNDAWFRDTGPTFVVNASNAGSVEQ--KVAGID 117
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
WNFNSWGGVDDGCY+DWSLDL VARKIL +++PRFPHSMVLEGGSIHVDGEGTCLTTEE
Sbjct: 118 WNFNSWGGVDDGCYQDWSLDLLVARKILGIQKVPRFPHSMVLEGGSIHVDGEGTCLTTEE 177
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
CLLNKNRNPHLTK QIENELK YLGV K+IWLPRGL+G
Sbjct: 178 CLLNKNRNPHLTKEQIENELKVYLGVQKVIWLPRGLYG 215
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/85 (84%), Positives = 76/85 (89%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G+I D EAKPRL GTRLAASYVNFYIANGGIITPQFGD+KWD EAVRVLSQAFP +EVV
Sbjct: 289 GVIQDNEAKPRLPGTRLAASYVNFYIANGGIITPQFGDQKWDDEAVRVLSQAFPNHEVVR 348
Query: 279 IERAREIVLGGGNIHCITQQQPAIP 303
IE AREIVL GGN HCITQQQPA+P
Sbjct: 349 IECAREIVLAGGNFHCITQQQPAVP 373
>gi|449440870|ref|XP_004138207.1| PREDICTED: agmatine deiminase-like [Cucumis sativus]
Length = 381
Score = 364 bits (934), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 168/219 (76%), Positives = 190/219 (86%), Gaps = 3/219 (1%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M++ G P+L + MPAEWEPHSQCW+GWP ER DNWRD+A+H QRVF KVA+AISKFE
Sbjct: 1 MDLEGHPSLLHFHMPAEWEPHSQCWLGWP---ERPDNWRDNAVHGQRVFVKVASAISKFE 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
PVTVCASA+QWENARSQLP NIRV+E+ MN SWFRDTGPT VV KS ++SG VAGI
Sbjct: 58 PVTVCASASQWENARSQLPANIRVVELGMNDSWFRDTGPTFVVRKSISNSGTAVESVAGI 117
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DW FNSWGG +DGCY DWSLDLQVARKIL ERLPRFP++++LEGGSIHVDGEGTCLTTE
Sbjct: 118 DWTFNSWGGAEDGCYADWSLDLQVARKILDIERLPRFPNTIILEGGSIHVDGEGTCLTTE 177
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
ECLLNKNRNPHL+KGQIE+ LK+YLGV KIIWLPRGL+G
Sbjct: 178 ECLLNKNRNPHLSKGQIEDILKSYLGVKKIIWLPRGLYG 216
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 79/90 (87%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G++ DG+AKPR G RLAASYVNFYIANGGII PQFGD+KWD EA+RVL+ AFP +E+VG
Sbjct: 290 GIVQDGDAKPRPPGMRLAASYVNFYIANGGIIAPQFGDQKWDDEAIRVLAGAFPNHEIVG 349
Query: 279 IERAREIVLGGGNIHCITQQQPAIPTNAAK 308
IE AREIVLGGGNIHCITQQQPAI ++ ++
Sbjct: 350 IEGAREIVLGGGNIHCITQQQPAITSSLSR 379
>gi|224130088|ref|XP_002328651.1| predicted protein [Populus trichocarpa]
gi|222838827|gb|EEE77178.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 359 bits (922), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 166/213 (77%), Positives = 187/213 (87%), Gaps = 3/213 (1%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
PA+HGY MPAEWEPHSQ WMGWP ER DNWRD+ALHAQ VF KVA AISKFEPVTVCA
Sbjct: 8 PAVHGYSMPAEWEPHSQTWMGWP---ERPDNWRDNALHAQLVFTKVAIAISKFEPVTVCA 64
Query: 67 SAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
S+AQWENARSQLPE++RV+EMSMN SWFRD GPT VV K+ ++ G ++AGIDWNFN
Sbjct: 65 SSAQWENARSQLPEHVRVLEMSMNDSWFRDIGPTFVVRKNGSNHGNLEQRIAGIDWNFNG 124
Query: 127 WGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNK 186
WGGVDDGCY+DWSLDL VARKI+ TE+LPRFPH M+LEGGSIHVDG+GTCLTTEECLLNK
Sbjct: 125 WGGVDDGCYQDWSLDLLVARKIIGTEKLPRFPHFMILEGGSIHVDGDGTCLTTEECLLNK 184
Query: 187 NRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
NRNP+LTK QIE++LKAYLGV K+IWLP GL+G
Sbjct: 185 NRNPNLTKEQIEDQLKAYLGVQKVIWLPYGLYG 217
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/83 (85%), Positives = 75/83 (90%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G++ DG AKPRL GTRLAASYVNFYIANGGIITPQFGD+KWD EAVRVLSQAFP +EVV
Sbjct: 291 GVVQDGNAKPRLPGTRLAASYVNFYIANGGIITPQFGDQKWDDEAVRVLSQAFPNHEVVR 350
Query: 279 IERAREIVLGGGNIHCITQQQPA 301
IE AREIVL GGNIHCITQQQPA
Sbjct: 351 IEGAREIVLAGGNIHCITQQQPA 373
>gi|147842216|emb|CAN66917.1| hypothetical protein VITISV_043040 [Vitis vinifera]
Length = 369
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 172/219 (78%), Positives = 186/219 (84%), Gaps = 8/219 (3%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
ME+ GTPALHGY MPAEWEPHSQCWMGWP ER DNWRD A AQRVFA+VA+AISKFE
Sbjct: 1 MEIEGTPALHGYHMPAEWEPHSQCWMGWP---ERPDNWRDHAGPAQRVFAEVASAISKFE 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
PVTVCASAAQW NARS LP++IRV+EMSM+ SWFRDTGPT + SS A K+ GI
Sbjct: 58 PVTVCASAAQWANARSLLPQHIRVVEMSMDDSWFRDTGPT-----PTPSSAAPVQKIVGI 112
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DWNFNSWGG DDGCY DWSLDL VA+KIL ER+PRFP SM+LEGGSIHVDGEGTCLTTE
Sbjct: 113 DWNFNSWGGYDDGCYNDWSLDLLVAKKILEIERVPRFPQSMILEGGSIHVDGEGTCLTTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
ECLLNKNRNPHLTK QIE ELK+YLGV K+IWLPRGLFG
Sbjct: 173 ECLLNKNRNPHLTKEQIEAELKSYLGVKKVIWLPRGLFG 211
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 71/84 (84%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G++ D AK R+AGTRLAASYVNFYIANG II P FGD+KWD EAVRVLS AFP +EVVG
Sbjct: 285 GILQDDNAKLRVAGTRLAASYVNFYIANGRIIAPVFGDQKWDDEAVRVLSLAFPNHEVVG 344
Query: 279 IERAREIVLGGGNIHCITQQQPAI 302
I+ AREI L GGNIHCITQQQPAI
Sbjct: 345 IKGAREIALAGGNIHCITQQQPAI 368
>gi|356562666|ref|XP_003549590.1| PREDICTED: agmatine deiminase-like [Glycine max]
Length = 376
Score = 354 bits (908), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 163/220 (74%), Positives = 188/220 (85%), Gaps = 4/220 (1%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M +NGTP G+ MPAEWE H+QCWMGWP ER DNWRD A+HAQRVFA+VA+AIS+FE
Sbjct: 3 MHLNGTPCALGFHMPAEWETHAQCWMGWP---ERADNWRDGAVHAQRVFARVASAISRFE 59
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSA-SSGAQAPKVAG 119
VTVC S+AQWENARSQLPE+IRV+EM+MN SWFRD GPT VV +S+ SG ++AG
Sbjct: 60 SVTVCVSSAQWENARSQLPEHIRVVEMNMNDSWFRDIGPTFVVRRSTTPESGDAVSRIAG 119
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTT 179
IDWNFNSWGG++DGCY DWSLDL VA+KIL E++PRF HSMVLEGGSIHVDGEGTCLTT
Sbjct: 120 IDWNFNSWGGLEDGCYCDWSLDLLVAKKILGIEKIPRFSHSMVLEGGSIHVDGEGTCLTT 179
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
EECLLNKNRNPHL+K QIE+ELK YLG+ K+IWLPRGL+G
Sbjct: 180 EECLLNKNRNPHLSKNQIEDELKTYLGIRKVIWLPRGLYG 219
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/84 (83%), Positives = 73/84 (86%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G+ D EAKPRL GTRLAASYVNFYIAN II PQFGDKKWD EAVRVLS+AFP +EVVG
Sbjct: 293 GVSLDNEAKPRLPGTRLAASYVNFYIANKAIIAPQFGDKKWDDEAVRVLSKAFPHHEVVG 352
Query: 279 IERAREIVLGGGNIHCITQQQPAI 302
IE AREIVL GGNIHCITQQQPAI
Sbjct: 353 IEGAREIVLAGGNIHCITQQQPAI 376
>gi|357477779|ref|XP_003609175.1| Agmatine deiminase [Medicago truncatula]
gi|355510230|gb|AES91372.1| Agmatine deiminase [Medicago truncatula]
Length = 322
Score = 343 bits (881), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 155/219 (70%), Positives = 182/219 (83%), Gaps = 3/219 (1%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M + TP HG+ MPAEWEPHSQCW+GWP ER DNWRD A+HAQ VF +VA AIS+FE
Sbjct: 2 MHLENTPTFHGFHMPAEWEPHSQCWIGWP---ERADNWRDGAVHAQLVFTRVAAAISRFE 58
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
VTVCAS+AQWENAR+QLP+++RV+E+S N SWFRD GPT VV + ++ S ++AGI
Sbjct: 59 KVTVCASSAQWENARNQLPDHVRVVEISSNDSWFRDIGPTFVVRRETSKSDDAEHRIAGI 118
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DW FNSWGG++DGCY DWSLD V +KIL ER+PRF HSMVLEGGSIHVDGEGTC+TTE
Sbjct: 119 DWTFNSWGGLEDGCYCDWSLDSLVKKKILDVERIPRFSHSMVLEGGSIHVDGEGTCITTE 178
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
ECLLNKNRNPHL+K QIE+ELKAYLGV K+IWLPRGL+G
Sbjct: 179 ECLLNKNRNPHLSKSQIEDELKAYLGVRKVIWLPRGLYG 217
>gi|388492142|gb|AFK34137.1| unknown [Medicago truncatula]
Length = 374
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 154/219 (70%), Positives = 181/219 (82%), Gaps = 3/219 (1%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M + TP HG+ MPAEWEPHSQCW+GWP ER DNWRD A+HAQ VF +VA AIS+FE
Sbjct: 2 MHLENTPTFHGFHMPAEWEPHSQCWIGWP---ERADNWRDGAVHAQLVFTRVAAAISRFE 58
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
VTVCAS+AQWENAR+QLP+++RV+E+S N SWFRD GPT VV + ++ S ++AGI
Sbjct: 59 KVTVCASSAQWENARNQLPDHVRVVEISSNDSWFRDIGPTFVVGRETSKSDDAEHRIAGI 118
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DW FNSWGG++DGCY DWSLD V +KIL R+PRF HSMVLEGGSIHVDGEGTC+TTE
Sbjct: 119 DWTFNSWGGLEDGCYCDWSLDSLVKKKILDVGRIPRFSHSMVLEGGSIHVDGEGTCITTE 178
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
ECLLNKNRNPHL+K QIE+ELKAYLGV K+IWLPRGL+G
Sbjct: 179 ECLLNKNRNPHLSKSQIEDELKAYLGVRKVIWLPRGLYG 217
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/84 (78%), Positives = 71/84 (84%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G+ D AKPRL GTRLAASYVNFYIANG II PQFGDKKWD EA+RVL + FP +EVVG
Sbjct: 291 GVFQDDGAKPRLPGTRLAASYVNFYIANGAIIAPQFGDKKWDDEAIRVLFKTFPHHEVVG 350
Query: 279 IERAREIVLGGGNIHCITQQQPAI 302
IE +REIVL GGNIHCITQQQPAI
Sbjct: 351 IEGSREIVLSGGNIHCITQQQPAI 374
>gi|217072080|gb|ACJ84400.1| unknown [Medicago truncatula]
Length = 374
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 154/219 (70%), Positives = 181/219 (82%), Gaps = 3/219 (1%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M + TP HG+ MPAEWEPHSQCW+GWP ER DNWRD A+HAQ VF +VA AIS+FE
Sbjct: 2 MHLENTPTFHGFHMPAEWEPHSQCWIGWP---ERADNWRDGAVHAQLVFTRVAAAISRFE 58
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
VTVCAS+AQWENAR+QLP+++RV+E+S N SWFRD GPT VV + ++ S ++AGI
Sbjct: 59 KVTVCASSAQWENARNQLPDHVRVVEISSNDSWFRDIGPTFVVGRETSKSDDAEHRIAGI 118
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DW FNSWGG++DGCY DWSLD V +KIL R+PRF HSMVLEGGSIHVDGEGTC+TTE
Sbjct: 119 DWTFNSWGGLEDGCYCDWSLDSLVKKKILDVGRIPRFSHSMVLEGGSIHVDGEGTCITTE 178
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
ECLLNKNRNPHL+K QIE+ELKAYLGV K+IWLPRGL+G
Sbjct: 179 ECLLNKNRNPHLSKSQIEDELKAYLGVRKVIWLPRGLYG 217
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/84 (79%), Positives = 72/84 (85%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G+ D AKPRL GTRLAASYVNFYIANG II PQFGDKKWD EA+RVLS+ FP +EVVG
Sbjct: 291 GVFQDDGAKPRLPGTRLAASYVNFYIANGAIIAPQFGDKKWDDEAIRVLSKTFPHHEVVG 350
Query: 279 IERAREIVLGGGNIHCITQQQPAI 302
IE +REIVL GGNIHCITQQQPAI
Sbjct: 351 IEGSREIVLSGGNIHCITQQQPAI 374
>gi|15241536|ref|NP_196434.1| agmatine deiminase [Arabidopsis thaliana]
gi|73622159|sp|Q8GWW7.2|AGUA_ARATH RecName: Full=Agmatine deiminase; AltName: Full=Agmatine
iminohydrolase; AltName: Full=Protein EMBRYO DEFECTIVE
1873
gi|8346554|emb|CAB93718.1| putative protein [Arabidopsis thaliana]
gi|332003878|gb|AED91261.1| agmatine deiminase [Arabidopsis thaliana]
Length = 383
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 155/218 (71%), Positives = 175/218 (80%), Gaps = 3/218 (1%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
E +PA HGY MPAEW+ H+Q W+GWP ER DNWR +AL AQRVFA VA AISKFEP
Sbjct: 3 ESRESPAEHGYYMPAEWDSHAQTWIGWP---ERQDNWRHNALPAQRVFADVAKAISKFEP 59
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VTVCAS AQWENAR QLPE+IRV+EMSMN SWFRD+GPT +V K + +AGID
Sbjct: 60 VTVCASPAQWENARKQLPEDIRVVEMSMNDSWFRDSGPTFIVRKRPVKLSSLNRNIAGID 119
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
WNFN+WGG +DGCY DWS DL V+RKIL+ ER+PRF HSM+LEGGSIHVDGEGTCL TEE
Sbjct: 120 WNFNAWGGANDGCYNDWSHDLLVSRKILALERIPRFQHSMILEGGSIHVDGEGTCLVTEE 179
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
CLLNKNRNPH++K QIE ELK YLGV IWLPRGL+G
Sbjct: 180 CLLNKNRNPHMSKEQIEEELKKYLGVQSFIWLPRGLYG 217
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/105 (67%), Positives = 80/105 (76%), Gaps = 7/105 (6%)
Query: 211 IWLPRGLF-------GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEA 263
+++P L+ G+ DGEA PRLAGTRLAASYVNFYIANGGII PQFGD D EA
Sbjct: 276 LYIPEPLYMTEEESSGITQDGEAIPRLAGTRLAASYVNFYIANGGIIAPQFGDPIRDKEA 335
Query: 264 VRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIPTNAAK 308
+RVLS FP + VVGIE AREIVL GGNIHCITQQQPA PT+ A+
Sbjct: 336 IRVLSDTFPHHSVVGIENAREIVLAGGNIHCITQQQPAEPTSVAE 380
>gi|26452202|dbj|BAC43189.1| unknown protein [Arabidopsis thaliana]
gi|28950963|gb|AAO63405.1| At5g08170 [Arabidopsis thaliana]
Length = 383
Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 155/218 (71%), Positives = 175/218 (80%), Gaps = 3/218 (1%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
E +PA HGY MPAEW+ H+Q W+GWP ER DNWR +AL AQRVFA VA AISKFEP
Sbjct: 3 ESRESPAEHGYYMPAEWDSHAQTWIGWP---ERQDNWRHNALPAQRVFAGVAKAISKFEP 59
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VTVCAS AQWENAR QLPE+IRV+EMSMN SWFRD+GPT +V K + +AGID
Sbjct: 60 VTVCASPAQWENARKQLPEDIRVVEMSMNDSWFRDSGPTFIVRKRPVKLSSLNRNIAGID 119
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
WNFN+WGG +DGCY DWS DL V+RKIL+ ER+PRF HSM+LEGGSIHVDGEGTCL TEE
Sbjct: 120 WNFNAWGGANDGCYNDWSHDLLVSRKILALERIPRFQHSMILEGGSIHVDGEGTCLVTEE 179
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
CLLNKNRNPH++K QIE ELK YLGV IWLPRGL+G
Sbjct: 180 CLLNKNRNPHMSKEQIEEELKKYLGVQSFIWLPRGLYG 217
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/105 (67%), Positives = 80/105 (76%), Gaps = 7/105 (6%)
Query: 211 IWLPRGLF-------GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEA 263
+++P L+ G+ DGEA PRLAGTRLAASYVNFYIANGGII PQFGD D EA
Sbjct: 276 LYIPEPLYMTEEESSGITQDGEAIPRLAGTRLAASYVNFYIANGGIIAPQFGDPIRDKEA 335
Query: 264 VRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIPTNAAK 308
+RVLS FP + VVGIE AREIVL GGNIHCITQQQPA PT+ A+
Sbjct: 336 IRVLSDTFPHHSVVGIENAREIVLAGGNIHCITQQQPAEPTSVAE 380
>gi|297810923|ref|XP_002873345.1| EMB1873 [Arabidopsis lyrata subsp. lyrata]
gi|297319182|gb|EFH49604.1| EMB1873 [Arabidopsis lyrata subsp. lyrata]
Length = 383
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 154/218 (70%), Positives = 174/218 (79%), Gaps = 3/218 (1%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
E +P HGY MPAEWEPH+Q W+GWP ER DNWR +AL AQRVFA VA AISKFEP
Sbjct: 3 ESRESPVEHGYYMPAEWEPHAQTWIGWP---ERQDNWRHNALPAQRVFADVAKAISKFEP 59
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VTVCAS AQWENAR QLPE+IRV+EMSMN SWFRD+GPT +V K + +AGID
Sbjct: 60 VTVCASPAQWENARKQLPEDIRVVEMSMNDSWFRDSGPTFIVRKRPLKLSSLNQNIAGID 119
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
WNFN+WGG +DGCY DWS DL V+RKIL+ ER+P F H+M+LEGGSIHVDGEGTCL TEE
Sbjct: 120 WNFNAWGGANDGCYNDWSHDLLVSRKILALERIPIFQHTMILEGGSIHVDGEGTCLVTEE 179
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
CLLNKNRNPH++K QIE ELK YLGV IWLPRGL+G
Sbjct: 180 CLLNKNRNPHMSKEQIEEELKKYLGVKTFIWLPRGLYG 217
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/90 (75%), Positives = 75/90 (83%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G+ DGEA PRLAGTRLAASYVNFYIANGGII PQFGD D EA+RVLS+ FP + VVG
Sbjct: 291 GITQDGEAIPRLAGTRLAASYVNFYIANGGIIAPQFGDPIRDKEAIRVLSETFPHHSVVG 350
Query: 279 IERAREIVLGGGNIHCITQQQPAIPTNAAK 308
IE AREIVL GGNIHCITQQQPA P++ A+
Sbjct: 351 IENAREIVLAGGNIHCITQQQPAEPSSVAE 380
>gi|312162106|gb|ADQ37300.1| putative agmatine iminohydrolase [Pinus sylvestris]
Length = 367
Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 156/219 (71%), Positives = 179/219 (81%), Gaps = 10/219 (4%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M+ N +P+ GY MPAEWE HSQCWMGWP ER DNWR++ LH QRVFA+VA+AISKFE
Sbjct: 1 MDNNASPSEFGYHMPAEWEFHSQCWMGWP---ERPDNWRENGLHGQRVFAEVASAISKFE 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
VTVCAS AQW++AR+QLP+NIRV+EMSMN +WFRD GPT VV ++S VAGI
Sbjct: 58 NVTVCASVAQWDSARAQLPKNIRVLEMSMNDAWFRDIGPTFVVCDRTSS-------VAGI 110
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DWNFNSWGG +DGCY+DWSLD VARKI+ ERL RFPHSMVLEGGSIHVDGEGTC+TTE
Sbjct: 111 DWNFNSWGGAEDGCYKDWSLDNLVARKIIEVERLTRFPHSMVLEGGSIHVDGEGTCITTE 170
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
ECLLN NRN HLT+ IE++LK YLGV KIIWLP GL+G
Sbjct: 171 ECLLNPNRNSHLTREAIEHQLKQYLGVTKIIWLPWGLYG 209
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 63/77 (81%)
Query: 225 EAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERARE 284
+ KPR+AGTRLAASY+NFYIAN GI+ P FGD+K D EA VLS FP +EVV + ARE
Sbjct: 288 DGKPRIAGTRLAASYINFYIANKGIVAPAFGDEKRDKEAFDVLSATFPDHEVVMVSGARE 347
Query: 285 IVLGGGNIHCITQQQPA 301
IVLGGGNIHCITQQQPA
Sbjct: 348 IVLGGGNIHCITQQQPA 364
>gi|14289303|dbj|BAB59127.1| hypothetical protein [Arabidopsis thaliana]
Length = 379
Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 152/214 (71%), Positives = 172/214 (80%), Gaps = 3/214 (1%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
+PA HGY MPAEW+ H+Q W+GWP ER DNWR +AL AQRVFA VA AISKFE VTVC
Sbjct: 3 SPAEHGYYMPAEWDSHAQTWIGWP---ERQDNWRHNALPAQRVFADVAKAISKFELVTVC 59
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
AS AQWENAR QLPE+IRV+EMSMN SWFRD+GPT +V K + +AGIDWNFN
Sbjct: 60 ASPAQWENARKQLPEDIRVVEMSMNDSWFRDSGPTFIVRKRPVKLSSLNRNIAGIDWNFN 119
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+W G +DGCY DWS DL V+RKIL+ ER+PRF HSM+LEGGSIHVDGEGTCL TEECLLN
Sbjct: 120 AWVGANDGCYNDWSHDLLVSRKILALERIPRFQHSMILEGGSIHVDGEGTCLVTEECLLN 179
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
KNRNPH++K QIE ELK YLGV IWLPRGL+G
Sbjct: 180 KNRNPHMSKEQIEEELKKYLGVQSFIWLPRGLYG 213
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/105 (67%), Positives = 80/105 (76%), Gaps = 7/105 (6%)
Query: 211 IWLPRGLF-------GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEA 263
+++P L+ G+ DGEA PRLAGTRLAASYVNFYIANGGII PQFGD D EA
Sbjct: 272 LYIPEPLYMTEEESSGITQDGEAIPRLAGTRLAASYVNFYIANGGIIAPQFGDPIRDKEA 331
Query: 264 VRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIPTNAAK 308
+RVLS FP + VVGIE AREIVL GGNIHCITQQQPA PT+ A+
Sbjct: 332 IRVLSDTFPHHSVVGIENAREIVLAGGNIHCITQQQPAEPTSVAE 376
>gi|238537984|pdb|3H7K|A Chain A, Crystal Structure Of Arabidopsis Thaliana Agmatine
Deiminase Complexed With A Covalently Bound Reaction
Intermediate
Length = 383
Score = 323 bits (827), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 151/218 (69%), Positives = 170/218 (77%), Gaps = 3/218 (1%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
E +PA HGY PAEW+ H+Q W+GWP ER DNWR +AL AQRVFA VA AISKFEP
Sbjct: 3 ESRESPAEHGYYXPAEWDSHAQTWIGWP---ERQDNWRHNALPAQRVFAGVAKAISKFEP 59
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VTVCAS AQWENAR QLPE+IRV+E S N SWFRD+GPT +V K + +AGID
Sbjct: 60 VTVCASPAQWENARKQLPEDIRVVEXSXNDSWFRDSGPTFIVRKRPVKLSSLNRNIAGID 119
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
WNFN+WGG +DGCY DWS DL V+RKIL+ ER+PRF HS +LEGGSIHVDGEGTCL TEE
Sbjct: 120 WNFNAWGGANDGCYNDWSHDLLVSRKILALERIPRFQHSXILEGGSIHVDGEGTCLVTEE 179
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
CLLNKNRNPH +K QIE ELK YLGV IWLPRGL+G
Sbjct: 180 CLLNKNRNPHXSKEQIEEELKKYLGVQSFIWLPRGLYG 217
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/105 (66%), Positives = 79/105 (75%), Gaps = 7/105 (6%)
Query: 211 IWLPRGLF-------GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEA 263
+++P L+ G+ DGEA PRLAGTRLAASYVNFYIANGGII PQFGD D EA
Sbjct: 276 LYIPEPLYXTEEESSGITQDGEAIPRLAGTRLAASYVNFYIANGGIIAPQFGDPIRDKEA 335
Query: 264 VRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIPTNAAK 308
+RVLS FP + VVGIE AREIVL GGNIH ITQQQPA PT+ A+
Sbjct: 336 IRVLSDTFPHHSVVGIENAREIVLAGGNIHXITQQQPAEPTSVAE 380
>gi|52696125|pdb|1VKP|A Chain A, X-Ray Structure Of Gene Product From Arabidopsis Thaliana
At5g08170, Agmatine Iminohydrolase
gi|52696126|pdb|1VKP|B Chain B, X-Ray Structure Of Gene Product From Arabidopsis Thaliana
At5g08170, Agmatine Iminohydrolase
gi|150261464|pdb|2Q3U|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Gene Product From Arabidopsis Thaliana At5g08170,
Agmatine Iminohydrolase
gi|150261465|pdb|2Q3U|B Chain B, Ensemble Refinement Of The Protein Crystal Structure Of
Gene Product From Arabidopsis Thaliana At5g08170,
Agmatine Iminohydrolase
Length = 383
Score = 323 bits (827), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 151/218 (69%), Positives = 170/218 (77%), Gaps = 3/218 (1%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
E +PA HGY PAEW+ H+Q W+GWP ER DNWR +AL AQRVFA VA AISKFEP
Sbjct: 3 ESRESPAEHGYYXPAEWDSHAQTWIGWP---ERQDNWRHNALPAQRVFAGVAKAISKFEP 59
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VTVCAS AQWENAR QLPE+IRV+E S N SWFRD+GPT +V K + +AGID
Sbjct: 60 VTVCASPAQWENARKQLPEDIRVVEXSXNDSWFRDSGPTFIVRKRPVKLSSLNRNIAGID 119
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
WNFN+WGG +DGCY DWS DL V+RKIL+ ER+PRF HS +LEGGSIHVDGEGTCL TEE
Sbjct: 120 WNFNAWGGANDGCYNDWSHDLLVSRKILALERIPRFQHSXILEGGSIHVDGEGTCLVTEE 179
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
CLLNKNRNPH +K QIE ELK YLGV IWLPRGL+G
Sbjct: 180 CLLNKNRNPHXSKEQIEEELKKYLGVQSFIWLPRGLYG 217
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/105 (67%), Positives = 80/105 (76%), Gaps = 7/105 (6%)
Query: 211 IWLPRGLF-------GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEA 263
+++P L+ G+ DGEA PRLAGTRLAASYVNFYIANGGII PQFGD D EA
Sbjct: 276 LYIPEPLYXTEEESSGITQDGEAIPRLAGTRLAASYVNFYIANGGIIAPQFGDPIRDKEA 335
Query: 264 VRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIPTNAAK 308
+RVLS FP + VVGIE AREIVL GGNIHCITQQQPA PT+ A+
Sbjct: 336 IRVLSDTFPHHSVVGIENAREIVLAGGNIHCITQQQPAEPTSVAE 380
>gi|238537983|pdb|3H7C|X Chain X, Crystal Structure Of Arabidopsis Thaliana Agmatine
Deiminase From Cell Free Expression
Length = 383
Score = 322 bits (826), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 151/218 (69%), Positives = 170/218 (77%), Gaps = 3/218 (1%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
E +PA HGY PAEW+ H+Q W+GWP ER DNWR +AL AQRVFA VA AISKFEP
Sbjct: 3 ESRESPAEHGYYXPAEWDSHAQTWIGWP---ERQDNWRHNALPAQRVFAGVAKAISKFEP 59
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VTVCAS AQWENAR QLPE+IRV+E S N SWFRD+GPT +V K + +AGID
Sbjct: 60 VTVCASPAQWENARKQLPEDIRVVEXSXNDSWFRDSGPTFIVRKRPVKLSSLNRNIAGID 119
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
WNFN+WGG +DGCY DWS DL V+RKIL+ ER+PRF HS +LEGGSIHVDGEGTCL TEE
Sbjct: 120 WNFNAWGGANDGCYNDWSHDLLVSRKILALERIPRFQHSXILEGGSIHVDGEGTCLVTEE 179
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
CLLNKNRNPH +K QIE ELK YLGV IWLPRGL+G
Sbjct: 180 CLLNKNRNPHXSKEQIEEELKKYLGVQSFIWLPRGLYG 217
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/105 (67%), Positives = 80/105 (76%), Gaps = 7/105 (6%)
Query: 211 IWLPRGLF-------GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEA 263
+++P L+ G+ DGEA PRLAGTRLAASYVNFYIANGGII PQFGD D EA
Sbjct: 276 LYIPEPLYXTEEESSGITQDGEAIPRLAGTRLAASYVNFYIANGGIIAPQFGDPIRDKEA 335
Query: 264 VRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIPTNAAK 308
+RVLS FP + VVGIE AREIVL GGNIHCITQQQPA PT+ A+
Sbjct: 336 IRVLSDTFPHHSVVGIENAREIVLAGGNIHCITQQQPAEPTSVAE 380
>gi|168012476|ref|XP_001758928.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690065|gb|EDQ76434.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 433
Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 144/217 (66%), Positives = 172/217 (79%), Gaps = 3/217 (1%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M GTP HG+ MPAEWE H+Q WMGWP ER DNWR+ A+HAQR F +VATAIS+FEPV
Sbjct: 1 MKGTPKEHGFYMPAEWELHAQTWMGWP---EREDNWREKAVHAQRAFVEVATAISEFEPV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCA+ +QWE ARSQLP N+RV+EMSMN +WFRDTGPT VV + + +VAG+ W
Sbjct: 58 TVCATGSQWEAARSQLPPNVRVLEMSMNDAWFRDTGPTFVVLDNVETETESIREVAGVRW 117
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG ++GCY DW+LD VARKIL ER+P+F +LEGGSIHVDGEGTCLTTEEC
Sbjct: 118 TFNAWGGKENGCYDDWTLDALVARKILDAERVPQFSQQFILEGGSIHVDGEGTCLTTEEC 177
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
LL+ NRNPHL +G+IE +LK YLGV K+IWLPRGL+G
Sbjct: 178 LLHPNRNPHLNQGEIEEQLKLYLGVEKVIWLPRGLYG 214
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
Query: 210 IIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQ 269
+ + P + G++ + A R G RLA+SYVNFYI NGG+I P FGD D A VL
Sbjct: 279 LYFKPEEVSGLVQNS-AVIRHEGQRLASSYVNFYICNGGVIAPAFGDLAADQAAEDVLRS 337
Query: 270 AFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
AFP ++VV I+ AREI+LGGGNIHCITQQQPA
Sbjct: 338 AFPTHKVVMIQHAREILLGGGNIHCITQQQPA 369
>gi|357164052|ref|XP_003579933.1| PREDICTED: agmatine deiminase-like [Brachypodium distachyon]
Length = 379
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/219 (65%), Positives = 167/219 (76%), Gaps = 5/219 (2%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M G PA G+ MPAEWEPH QCWMGWP ER DNWR++A A++ FA+ A AISKFEPV
Sbjct: 5 MAGCPAKMGFRMPAEWEPHEQCWMGWP---ERPDNWRENAGPARKTFARTAIAISKFEPV 61
Query: 63 TVCASAAQWENARS--QLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
T+CASA Q+ Q NIRV+EMSMN SWFRDTGPT + K + G +AGI
Sbjct: 62 TICASAEQYPYVHKLMQHQPNIRVVEMSMNDSWFRDTGPTFITRKGGSDIGLTDQTIAGI 121
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DW FN+WGGV GCY DWSLD +A+KI+ ER+PRFPH MVLEGGSIHVDGEGTC+TTE
Sbjct: 122 DWEFNAWGGVGGGCYDDWSLDRNIAKKIIDMERIPRFPHRMVLEGGSIHVDGEGTCITTE 181
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
ECLLN NRNP++TK +IENELK +LGV KIIW+PRGL+G
Sbjct: 182 ECLLNPNRNPNMTKLEIENELKDFLGVTKIIWIPRGLYG 220
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 77/108 (71%), Gaps = 8/108 (7%)
Query: 204 YLGVMKIIWLPRGLF-------GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGD 256
++ V+KI +PR L+ G+ G A PR+ G RLAASYVNFY ANGGII P FGD
Sbjct: 273 HIEVVKIN-IPRPLYITKEEGDGVDATGHAVPRVPGDRLAASYVNFYAANGGIIAPAFGD 331
Query: 257 KKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIPT 304
K+ D EA VL +AFP +E+V +E AREIVLGGGNIHCITQQQP P+
Sbjct: 332 KQRDDEAREVLQKAFPDHEIVMVEGAREIVLGGGNIHCITQQQPVRPS 379
>gi|302793562|ref|XP_002978546.1| hypothetical protein SELMODRAFT_108641 [Selaginella moellendorffii]
gi|300153895|gb|EFJ20532.1| hypothetical protein SELMODRAFT_108641 [Selaginella moellendorffii]
Length = 368
Score = 303 bits (775), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 161/214 (75%), Gaps = 5/214 (2%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP GY MPAEWE HS CWMGWP ER DNWRDDA AQ F +VATAIS+FE VTVC
Sbjct: 3 TPRDLGYYMPAEWERHSGCWMGWP---ERTDNWRDDAKPAQAAFVEVATAISQFEDVTVC 59
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
ASAAQWENARSQLP+ +RVIEMSM+ SWFRDTGPT VV + AGIDW FN
Sbjct: 60 ASAAQWENARSQLPKRVRVIEMSMSDSWFRDTGPTFVVKRVRLPGAGGG--TAGIDWTFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WGG GCYR+W D VARKIL RLPRF H+MVLEGG+IHVDGEGTCLTTEECLLN
Sbjct: 118 AWGGATAGCYRNWEFDSLVARKILEVARLPRFSHTMVLEGGAIHVDGEGTCLTTEECLLN 177
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
NRN +TK +IE +LK YLGV +IWLPRGL G
Sbjct: 178 PNRNASMTKQEIEEQLKLYLGVEAVIWLPRGLHG 211
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 62/81 (76%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ + A R AG RLAASYVNFYIANGGI+ P FGD D +A +VLS+AFP +VV ++
Sbjct: 286 VKELSAVSRPAGERLAASYVNFYIANGGIVAPAFGDAARDEQAFKVLSEAFPNRKVVMVK 345
Query: 281 RAREIVLGGGNIHCITQQQPA 301
R REIVLGGGNIHCIT QQP+
Sbjct: 346 RGREIVLGGGNIHCITLQQPS 366
>gi|302774108|ref|XP_002970471.1| hypothetical protein SELMODRAFT_231554 [Selaginella moellendorffii]
gi|300161987|gb|EFJ28601.1| hypothetical protein SELMODRAFT_231554 [Selaginella moellendorffii]
Length = 368
Score = 300 bits (768), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 145/214 (67%), Positives = 159/214 (74%), Gaps = 5/214 (2%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP GY MPAEWE HS CWMGWP ER DNWRDDA AQ F +VATAIS+FE VTVC
Sbjct: 3 TPRDLGYYMPAEWEHHSGCWMGWP---ERTDNWRDDAKPAQAAFVEVATAISRFEDVTVC 59
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
AS AQWENARSQLPE +RVIEMSM+ SWFRDTGPT V + AGIDW FN
Sbjct: 60 ASVAQWENARSQLPERVRVIEMSMSDSWFRDTGPTFVAKRVRLPGAGGG--TAGIDWTFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WGG GCYR+W D VARKIL RLPRF H+M+LEGG+IHVDGEGTCLTTEECLLN
Sbjct: 118 AWGGATAGCYRNWEFDSLVARKILEVARLPRFLHTMILEGGAIHVDGEGTCLTTEECLLN 177
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
NRN +TK +IE +LK YLGV +IWLPRGL G
Sbjct: 178 PNRNASMTKQEIEEQLKLYLGVEAVIWLPRGLHG 211
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 62/81 (76%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ + A R AG RLAASYVNFYIANGGI+ P FGD D +A +VLS+AFP +VV ++
Sbjct: 286 VKELSAVSRPAGERLAASYVNFYIANGGIVAPAFGDAARDEQAFKVLSEAFPNRKVVMVK 345
Query: 281 RAREIVLGGGNIHCITQQQPA 301
R REIVLGGGNIHCIT QQP+
Sbjct: 346 RGREIVLGGGNIHCITLQQPS 366
>gi|38606518|emb|CAE05993.3| OSJNBa0016O02.3 [Oryza sativa Japonica Group]
Length = 410
Score = 299 bits (766), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 140/219 (63%), Positives = 165/219 (75%), Gaps = 5/219 (2%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M G PA G+ MPAEWEPH QCWMGWP ER DNWR+ A A++VFA+ A AISKFE V
Sbjct: 7 MEGRPAKMGFRMPAEWEPHEQCWMGWP---ERRDNWRELAGPARKVFARTAIAISKFESV 63
Query: 63 TVCASAAQWENARSQL--PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
T+CASA Q+ + NIRV+EMSMN WFRD GPT +V K + G +AGI
Sbjct: 64 TICASAKQYPYVHELMLHQPNIRVVEMSMNDCWFRDIGPTFIVRKGAPGLGITEKNIAGI 123
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DW FN+WGG DGCY DWSLD VA+KI+ ER+PRFPH+MVLEGGSIHVDGEGTC+TTE
Sbjct: 124 DWEFNAWGGATDGCYVDWSLDSYVAKKIVEIERIPRFPHTMVLEGGSIHVDGEGTCITTE 183
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
ECLLN NRNP++TK +IENELK +LGV K+IW+P GL+G
Sbjct: 184 ECLLNPNRNPNMTKLEIENELKDFLGVAKVIWIPHGLYG 222
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVV 277
G++ A PR GTRLAASYVNFYIANGGI+ P FGD KWD EA VL +AFP +EV+
Sbjct: 296 GVVKTEHAIPREPGTRLAASYVNFYIANGGIVAPAFGD-KWDEEACAVLQKAFPDHEVI 353
>gi|116309723|emb|CAH66768.1| OSIGBa0115M15.6 [Oryza sativa Indica Group]
gi|215769308|dbj|BAH01537.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629018|gb|EEE61150.1| hypothetical protein OsJ_15109 [Oryza sativa Japonica Group]
Length = 380
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 140/219 (63%), Positives = 165/219 (75%), Gaps = 5/219 (2%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M G PA G+ MPAEWEPH QCWMGWP ER DNWR+ A A++VFA+ A AISKFE V
Sbjct: 7 MEGRPAKMGFRMPAEWEPHEQCWMGWP---ERRDNWRELAGPARKVFARTAIAISKFESV 63
Query: 63 TVCASAAQWENARSQL--PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
T+CASA Q+ + NIRV+EMSMN WFRD GPT +V K + G +AGI
Sbjct: 64 TICASAKQYPYVHELMLHQPNIRVVEMSMNDCWFRDIGPTFIVRKGAPGLGITEKNIAGI 123
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DW FN+WGG DGCY DWSLD VA+KI+ ER+PRFPH+MVLEGGSIHVDGEGTC+TTE
Sbjct: 124 DWEFNAWGGATDGCYVDWSLDSYVAKKIVEIERIPRFPHTMVLEGGSIHVDGEGTCITTE 183
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
ECLLN NRNP++TK +IENELK +LGV K+IW+P GL+G
Sbjct: 184 ECLLNPNRNPNMTKLEIENELKDFLGVAKVIWIPHGLYG 222
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G++ A PR GTRLAASYVNFYIANGGI+ P FGDK WD EA VL +AFP +EVV
Sbjct: 296 GVVKTEHAIPREPGTRLAASYVNFYIANGGIVAPAFGDK-WDEEACAVLQKAFPDHEVVM 354
Query: 279 IERAREIVLGGGNIHCITQQQPAIPT 304
+E AREIVL GGNIHCITQQQP P+
Sbjct: 355 VEGAREIVLAGGNIHCITQQQPVRPS 380
>gi|218195011|gb|EEC77438.1| hypothetical protein OsI_16239 [Oryza sativa Indica Group]
Length = 374
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 140/219 (63%), Positives = 165/219 (75%), Gaps = 5/219 (2%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M G PA G+ MPAEWEPH QCWMGWP ER DNWR+ A A++VFA+ A AISKFE V
Sbjct: 1 MEGRPAKMGFRMPAEWEPHEQCWMGWP---ERRDNWRELAGPARKVFARTAIAISKFESV 57
Query: 63 TVCASAAQWENARSQL--PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
T+CASA Q+ + NIRV+EMSMN WFRD GPT +V K + G +AGI
Sbjct: 58 TICASAKQYPYVHELMLHQPNIRVVEMSMNDCWFRDIGPTFIVRKGAPGLGITEKNIAGI 117
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DW FN+WGG DGCY DWSLD VA+KI+ ER+PRFPH+MVLEGGSIHVDGEGTC+TTE
Sbjct: 118 DWEFNAWGGATDGCYVDWSLDSYVAKKIVEIERIPRFPHTMVLEGGSIHVDGEGTCITTE 177
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
ECLLN NRNP++TK +IENELK +LGV K+IW+P GL+G
Sbjct: 178 ECLLNPNRNPNMTKLEIENELKDFLGVAKVIWIPHGLYG 216
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G++ A PR GTRLAASYVNFYIANGGI+ P FGDK WD EA VL +AFP +EVV
Sbjct: 290 GVVKTEHAIPREPGTRLAASYVNFYIANGGIVAPAFGDK-WDEEACAVLQKAFPDHEVVM 348
Query: 279 IERAREIVLGGGNIHCITQQQPAIPT 304
+E AREIVL GGNIHCITQQQP P+
Sbjct: 349 VEGAREIVLAGGNIHCITQQQPVRPS 374
>gi|326493960|dbj|BAJ85442.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 379
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/217 (62%), Positives = 160/217 (73%), Gaps = 5/217 (2%)
Query: 5 GTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTV 64
G PA G+ MPAEWEPH QCWMGWP ER DNWR+ A A++ F + A AISKFEPVT+
Sbjct: 7 GCPAKMGFRMPAEWEPHEQCWMGWP---ERPDNWREHAGPARKTFERTAIAISKFEPVTI 63
Query: 65 CASAAQWENARS--QLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
CAS Q+ Q NIRV+EMSMN SWFRDTGPT + + + G +AGIDW
Sbjct: 64 CASTKQYPYVHELMQHQPNIRVVEMSMNDSWFRDTGPTFITREGGSDIGLAEQTIAGIDW 123
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG+ GC+ DWSLD +ARKI+ ER+P F H+MVLEGGSIHVDGEGTC+TTEEC
Sbjct: 124 EFNAWGGLGGGCFDDWSLDRSIARKIVEIERIPWFAHTMVLEGGSIHVDGEGTCITTEEC 183
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
LLN NRNPH+TK +IENELK +LGV KIIW+P GL G
Sbjct: 184 LLNPNRNPHMTKLEIENELKDFLGVTKIIWIPLGLHG 220
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 65/86 (75%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G++ G A PR+ G RLAASYVN Y ANGGII P FGDKK D A VL +AFP +EVV
Sbjct: 294 GVLATGHAVPRVPGKRLAASYVNLYQANGGIIAPAFGDKKRDDAAREVLQKAFPDHEVVM 353
Query: 279 IERAREIVLGGGNIHCITQQQPAIPT 304
+E AREIVLGGGNIHCITQQQP P+
Sbjct: 354 VEGAREIVLGGGNIHCITQQQPVRPS 379
>gi|226508546|ref|NP_001149900.1| agmatine deiminase [Zea mays]
gi|195635343|gb|ACG37140.1| agmatine deiminase [Zea mays]
Length = 372
Score = 286 bits (733), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 138/219 (63%), Positives = 164/219 (74%), Gaps = 11/219 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ G PA G+ MPAEWEPH QCWMGWP ER DNWR++A AQ VFA+ A AISKFEPV
Sbjct: 5 IQGRPAEMGFRMPAEWEPHEQCWMGWP---ERPDNWRENAGPAQEVFARTAIAISKFEPV 61
Query: 63 TVCASAAQWENARSQLPE--NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
T+CASA Q+ + NIRV+EMSMN SWFRD GPT V +K SG +AGI
Sbjct: 62 TLCASAKQYPKVHELMEHETNIRVVEMSMNDSWFRDMGPTFVTHK--GDSGIAEQTIAGI 119
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DW FN+WGG+ Y DWSLD VA+KI+ ER+PRFP ++LEGGSIHVDGEGTC+TTE
Sbjct: 120 DWQFNAWGGI----YDDWSLDSDVAKKIVEIERIPRFPQKIILEGGSIHVDGEGTCITTE 175
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
ECLLN NRNP++TK +IENELK +LGV K+IW+PRGL+G
Sbjct: 176 ECLLNPNRNPNMTKLEIENELKDFLGVSKVIWIPRGLYG 214
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G++ G + PR AGTRLAASYVNFYIANGGII P FGD+ WD EA VL +AFP +EVV
Sbjct: 288 GVVSSGHSVPRPAGTRLAASYVNFYIANGGIIAPSFGDR-WDEEAYAVLQKAFPDHEVVM 346
Query: 279 IERAREIVLGGGNIHCITQQQPAIPT 304
+E REI LGGGNIHCITQQQP P+
Sbjct: 347 VEGGREIALGGGNIHCITQQQPVRPS 372
>gi|224031277|gb|ACN34714.1| unknown [Zea mays]
gi|413918590|gb|AFW58522.1| agmatine deiminase [Zea mays]
Length = 372
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 138/219 (63%), Positives = 163/219 (74%), Gaps = 11/219 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ G PA G+ MPAEWEPH QCWMGWP ER DNWR++A AQ VFA+ A AISKFEPV
Sbjct: 5 IQGRPAEMGFRMPAEWEPHEQCWMGWP---ERPDNWRENAGPAQEVFARTAIAISKFEPV 61
Query: 63 TVCASAAQWENARSQLPE--NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
T+CASA Q+ + NIRV+EMSMN SWFRD GPT V K SG +AGI
Sbjct: 62 TLCASAKQYPKVHELMEHQTNIRVVEMSMNDSWFRDMGPTFVTCK--GDSGIAEQTIAGI 119
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DW FN+WGG+ Y DWSLD VA+KI+ ER+PRFP ++LEGGSIHVDGEGTC+TTE
Sbjct: 120 DWQFNAWGGI----YDDWSLDSDVAKKIVEIERIPRFPQKIILEGGSIHVDGEGTCITTE 175
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
ECLLN NRNP++TK +IENELK +LGV K+IW+PRGL+G
Sbjct: 176 ECLLNPNRNPNMTKLEIENELKDFLGVSKVIWIPRGLYG 214
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G++ G + PR AGTRLAASYVNFYIANGGII P FGD+ WD EA VL +AFP +EVV
Sbjct: 288 GVVSSGHSVPRPAGTRLAASYVNFYIANGGIIAPSFGDR-WDEEAYAVLQKAFPDHEVVM 346
Query: 279 IERAREIVLGGGNIHCITQQQPAIPT 304
+E REI LGGGNIHCITQQQP P+
Sbjct: 347 VEGGREIALGGGNIHCITQQQPVRPS 372
>gi|413918591|gb|AFW58523.1| hypothetical protein ZEAMMB73_799556 [Zea mays]
Length = 414
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 138/219 (63%), Positives = 163/219 (74%), Gaps = 11/219 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ G PA G+ MPAEWEPH QCWMGWP ER DNWR++A AQ VFA+ A AISKFEPV
Sbjct: 5 IQGRPAEMGFRMPAEWEPHEQCWMGWP---ERPDNWRENAGPAQEVFARTAIAISKFEPV 61
Query: 63 TVCASAAQWENARSQLPE--NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
T+CASA Q+ + NIRV+EMSMN SWFRD GPT V K SG +AGI
Sbjct: 62 TLCASAKQYPKVHELMEHQTNIRVVEMSMNDSWFRDMGPTFVTCK--GDSGIAEQTIAGI 119
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DW FN+WGG+ Y DWSLD VA+KI+ ER+PRFP ++LEGGSIHVDGEGTC+TTE
Sbjct: 120 DWQFNAWGGI----YDDWSLDSDVAKKIVEIERIPRFPQKIILEGGSIHVDGEGTCITTE 175
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
ECLLN NRNP++TK +IENELK +LGV K+IW+PRGL+G
Sbjct: 176 ECLLNPNRNPNMTKLEIENELKDFLGVSKVIWIPRGLYG 214
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 67/128 (52%), Gaps = 43/128 (33%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYE--- 275
G++ G + PR AGTRLAASYVNFYIANGGII P FGD +WD EA VL +AFP +E
Sbjct: 288 GVVSSGHSVPRPAGTRLAASYVNFYIANGGIIAPSFGD-RWDEEAYAVLQKAFPDHEVVY 346
Query: 276 ---------------------------------------VVGIERAREIVLGGGNIHCIT 296
VV +E REI LGGGNIHCIT
Sbjct: 347 LCFLFHLRTLRLLTIALCAVEHLLEVRRWCDECCGWHAQVVMVEGGREIALGGGNIHCIT 406
Query: 297 QQQPAIPT 304
QQQP P+
Sbjct: 407 QQQPVRPS 414
>gi|242073404|ref|XP_002446638.1| hypothetical protein SORBIDRAFT_06g019370 [Sorghum bicolor]
gi|241937821|gb|EES10966.1| hypothetical protein SORBIDRAFT_06g019370 [Sorghum bicolor]
Length = 375
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/214 (63%), Positives = 159/214 (74%), Gaps = 11/214 (5%)
Query: 8 ALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCAS 67
A G+ MPAEWEPH QCWMGWP ER DNWR++A AQ VFA+ A AISKFE VT+CAS
Sbjct: 11 AKMGFRMPAEWEPHEQCWMGWP---ERPDNWRENAGPAQEVFARTAIAISKFENVTLCAS 67
Query: 68 AAQWENARSQLPE--NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A Q+ + NIRV+EMSMN SWFRD GPT + K SG +AGIDW FN
Sbjct: 68 AKQYPKVHELMEHQTNIRVVEMSMNDSWFRDMGPTFITRK--GDSGNAEKTIAGIDWQFN 125
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WGG+ Y DWSLD VA+KI+ ER+PRF H M+LEGGSIHVDGEGTC+TTEECLLN
Sbjct: 126 AWGGI----YDDWSLDSDVAKKIVEIERIPRFLHKMILEGGSIHVDGEGTCITTEECLLN 181
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
NRNP++TK +IENELK +LGV K+IW+PRGL+G
Sbjct: 182 PNRNPNMTKLEIENELKDFLGVSKVIWIPRGLYG 215
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/87 (70%), Positives = 69/87 (79%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G++ G A PR GTRLAASYVNFYIANGGI+ P FGD KWD EA VL +AFP +EVV
Sbjct: 289 GVVSTGHAVPREPGTRLAASYVNFYIANGGIVAPSFGDNKWDKEAYAVLQKAFPDHEVVM 348
Query: 279 IERAREIVLGGGNIHCITQQQPAIPTN 305
+E AREIVLGGGNIHCITQQQP P++
Sbjct: 349 VEGAREIVLGGGNIHCITQQQPVRPSS 375
>gi|239626207|ref|ZP_04669238.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520437|gb|EEQ60303.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 363
Score = 259 bits (663), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 160/370 (43%), Positives = 201/370 (54%), Gaps = 90/370 (24%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+EPH CW+ WP ER DNWR A AQ+VF +VA AIS+FEPVTVC
Sbjct: 7 TPKQDGFRMPGEFEPHEGCWIIWP---ERPDNWRLGAKPAQKVFVEVAKAISQFEPVTVC 63
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S AQ++NARSQLPE++RV+EMS + SW RD GPT V N S +V G+DW+FN
Sbjct: 64 VSNAQYDNARSQLPEDVRVVEMSTDDSWIRDCGPTFVTNGS---------EVRGVDWSFN 114
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGT------CLT 178
+WGG+ DG Y W D VARK+ ER R+ +LEGGSIHVDGEGT CL
Sbjct: 115 AWGGLVDGLYFPWDKDDHVARKVCDIERKDRYRLDDFILEGGSIHVDGEGTLIVTGECLL 174
Query: 179 TE--ECLLNKNRNPHL---------------------TKGQIENEL-------------- 201
+E L K H+ T G ++N +
Sbjct: 175 SEGRNSHLTKEEIEHVLKEYLNLEKIIWIPYGIYNDETNGHVDNIIHYIAPGEVILAWTD 234
Query: 202 -----------KAY-------------LGVMKIIWLPRGLFGMIHDGEAK-------PRL 230
KAY L + K++ LP+ + + E PR+
Sbjct: 235 DKEDPQYDICQKAYAVLSSETDAKGRSLKIHKLM-LPKNILITKEESEGVDAVDGTLPRM 293
Query: 231 AGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGG 290
G RLAASY NFYIANGG++ P FGD+ D +A + L + FP +VVG+ AREI+LGGG
Sbjct: 294 EGDRLAASYANFYIANGGVVFPMFGDEN-DEKARKTLEECFPGRKVVGL-YAREILLGGG 351
Query: 291 NIHCITQQQP 300
NIHCITQQQP
Sbjct: 352 NIHCITQQQP 361
>gi|313112098|ref|ZP_07797881.1| agmatine deiminase [Pseudomonas aeruginosa 39016]
gi|355646475|ref|ZP_09054449.1| agmatine deiminase [Pseudomonas sp. 2_1_26]
gi|386063291|ref|YP_005978595.1| agmatine deiminase [Pseudomonas aeruginosa NCGM2.S1]
gi|416880002|ref|ZP_11921129.1| agmatine deiminase [Pseudomonas aeruginosa 152504]
gi|310884383|gb|EFQ42977.1| agmatine deiminase [Pseudomonas aeruginosa 39016]
gi|334836801|gb|EGM15593.1| agmatine deiminase [Pseudomonas aeruginosa 152504]
gi|348031850|dbj|BAK87210.1| agmatine deiminase [Pseudomonas aeruginosa NCGM2.S1]
gi|354828532|gb|EHF12651.1| agmatine deiminase [Pseudomonas sp. 2_1_26]
Length = 368
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 149/221 (67%), Gaps = 13/221 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEWEPH Q WM WP ER DNWR+ AQ F VA AI++FEPVTVC
Sbjct: 7 TPRADGFRMPAEWEPHEQTWMVWP---ERPDNWRNGGKPAQAAFTAVAKAIARFEPVTVC 63
Query: 66 ASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
ASA Q+ENAR++L + NIRV+E+S + +W RDTGPT V++ V G+DW F
Sbjct: 64 ASAGQYENARARLDDGNIRVVEISSDDAWVRDTGPTFVIDDKG--------DVRGVDWGF 115
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECL 183
N+WGG + G Y W D QVARKIL ER R+ VLEGGSIHVDGEGT +TTEECL
Sbjct: 116 NAWGGFEGGLYFPWQRDDQVARKILEIERRARYRTDDFVLEGGSIHVDGEGTLITTEECL 175
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LN NRNPHL++ +IE L+ YL V IIWLP GL+ DG
Sbjct: 176 LNHNRNPHLSQAEIERTLRDYLAVDSIIWLPNGLYNDETDG 216
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++PR RLA SYVNF I NGGI+ P F D K D EA +L + FP++EVV + REI
Sbjct: 291 SQPRDPSIRLAGSYVNFLIVNGGIVAPSFDDPK-DAEARAILQRVFPEHEVVMVP-GREI 348
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHCITQQQPA
Sbjct: 349 LLGGGNIHCITQQQPA 364
>gi|452879042|ref|ZP_21956190.1| agmatine deiminase [Pseudomonas aeruginosa VRFPA01]
gi|452184352|gb|EME11370.1| agmatine deiminase [Pseudomonas aeruginosa VRFPA01]
Length = 368
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 150/221 (67%), Gaps = 13/221 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEWEPH Q WM WP ER DNWR+ AQ F VA AI++FEPVTVC
Sbjct: 7 TPRADGFRMPAEWEPHEQTWMVWP---ERPDNWRNGGKPAQAAFTAVAKAIARFEPVTVC 63
Query: 66 ASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
ASAAQ+ENAR++L + NIRV+E+S + +W RDTGPT V++ V G+DW F
Sbjct: 64 ASAAQYENARARLDDANIRVVEISTDDAWVRDTGPTFVIDDQG--------DVRGVDWGF 115
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECL 183
N+WGG + G Y W D QVARKIL ER R+ VLEGGSIHVDGEGT +TTEECL
Sbjct: 116 NAWGGFEGGLYFPWQRDDQVARKILEIERRARYRTDDFVLEGGSIHVDGEGTLITTEECL 175
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LN NRNPHL++ +IE L+ +L V IIWLP GL+ DG
Sbjct: 176 LNHNRNPHLSQAEIEGILRDHLAVDSIIWLPNGLYNDETDG 216
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++PR RLA SYVNF I NGGI+ P F D K D EA +L + FP+ EVV + REI
Sbjct: 291 SQPRDPSIRLAGSYVNFLIVNGGIVAPSFDDPK-DAEARAILQRVFPEQEVVMVP-GREI 348
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHCITQQQPA
Sbjct: 349 LLGGGNIHCITQQQPA 364
>gi|152987588|ref|YP_001345778.1| agmatine deiminase [Pseudomonas aeruginosa PA7]
gi|166919511|sp|A6UY93.1|AGUA_PSEA7 RecName: Full=Agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|150962746|gb|ABR84771.1| agmatine deiminase [Pseudomonas aeruginosa PA7]
Length = 368
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 150/221 (67%), Gaps = 13/221 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEWEPH Q WM WP ER DNWR+ AQ F VA AI++FEPVTVC
Sbjct: 7 TPRADGFRMPAEWEPHEQTWMVWP---ERPDNWRNGGKPAQAAFTAVAKAIARFEPVTVC 63
Query: 66 ASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
ASAAQ+ENAR++L + NIRV+E+S + +W RDTGPT V++ V G+DW F
Sbjct: 64 ASAAQYENARARLDDTNIRVVEISTDDAWVRDTGPTFVIDDQG--------DVRGVDWGF 115
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECL 183
N+WGG + G Y W D QVARKIL ER R+ VLEGGSIHVDGEGT +TTEECL
Sbjct: 116 NAWGGFEGGLYFPWQRDDQVARKILEIERRARYRTDDFVLEGGSIHVDGEGTLITTEECL 175
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LN NRNPHL++ +IE L+ +L V IIWLP GL+ DG
Sbjct: 176 LNHNRNPHLSQAEIEGILRDHLAVDSIIWLPNGLYNDETDG 216
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++PR RLA SYVNF I NGGI+ P F D K D EA +L + FP++EVV + REI
Sbjct: 291 SQPRDPSIRLAGSYVNFLIVNGGIVAPSFDDPK-DAEARAILQRVFPEHEVVMVP-GREI 348
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHCITQQQPA
Sbjct: 349 LLGGGNIHCITQQQPA 364
>gi|421615509|ref|ZP_16056533.1| agmatine deiminase [Pseudomonas stutzeri KOS6]
gi|409782582|gb|EKN62137.1| agmatine deiminase [Pseudomonas stutzeri KOS6]
Length = 368
Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 150/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP GY MPAEW PHSQ WM WP +R DNWRD+A AQ F VA AI++FEPV
Sbjct: 4 LSSTPRQDGYYMPAEWAPHSQTWMVWP---QRPDNWRDNATPAQAAFTAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TVCASA Q+ AR+ L + IRV+EMS + +W RDTGPT V++ + G+D
Sbjct: 61 TVCASAEQYLAARAALDDPRIRVVEMSTDDAWVRDTGPTFVIDDHGG--------LRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y DW D +VARKIL E R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WTFNAWGGDDGGLYSDWQRDDEVARKILEVEHCDRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL++ +IE L+ +L V IIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLSREEIETVLRDHLAVDTIIWLPHGLFNDETDG 216
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 91/181 (50%), Gaps = 31/181 (17%)
Query: 144 VARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIENE 200
V R L+ + + PH + + HVD + E LL + +P+ + Q
Sbjct: 192 VLRDHLAVDTIIWLPHGLFNDETDGHVDNFCCFVRPGEVLLAWTDDANDPNFERCQ---- 247
Query: 201 LKAYLGVMKIIWLPRG---------LFGMIHDGE-----------AKPRLAGTRLAASYV 240
A + V++ RG + G +H E ++PR RLA SYV
Sbjct: 248 --AAMAVLQTARDARGRALTVHRMPIPGPLHATEQECAGVLPLDGSQPRDPSIRLAGSYV 305
Query: 241 NFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
NF I NGGII P FGD D EA R+L Q FP++EVV + REI+LGGGNIHCITQQQP
Sbjct: 306 NFLIVNGGIIAPAFGD-PLDAEAERILVQLFPEHEVVMVA-GREILLGGGNIHCITQQQP 363
Query: 301 A 301
A
Sbjct: 364 A 364
>gi|429210729|ref|ZP_19201895.1| agmatine deiminase [Pseudomonas sp. M1]
gi|428158143|gb|EKX04690.1| agmatine deiminase [Pseudomonas sp. M1]
Length = 367
Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 149/217 (68%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MPAEWEPH+Q WM WP ER DNWR AQ F+ VA AI++FEPV
Sbjct: 4 LTSTPRADGFRMPAEWEPHTQTWMVWP---ERPDNWRLGGKPAQAAFSAVAEAIARFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVC SAAQ+ENAR++L + IRVIE+S + +W RDTGPT VV+ V G+DW
Sbjct: 61 TVCVSAAQFENARARLSDAIRVIEISNDDAWVRDTGPTFVVDDQGG--------VRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG+D G Y W D QVA KIL ER R+ VLEGGSIHVDGEGT +TTEE
Sbjct: 113 TFNAWGGLDGGLYFPWLRDDQVAAKILQVERCDRYRTEGFVLEGGSIHVDGEGTLITTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLLN+NRNPHL++ +IE L+ +L V +IWLP GL+
Sbjct: 173 CLLNRNRNPHLSREEIEQVLREHLAVDSVIWLPDGLY 209
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++ R RLA SYVNF I NGGI+ P F D K D EA +L + FP++EVV + REI
Sbjct: 290 SQERDPSIRLAGSYVNFLIVNGGIVAPSFDDPK-DAEAKAILQRVFPEHEVVMVP-GREI 347
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHCITQQQPA
Sbjct: 348 LLGGGNIHCITQQQPA 363
>gi|399519015|ref|ZP_10759823.1| Agmatine deiminase [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399112839|emb|CCH36381.1| Agmatine deiminase [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 368
Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 153/224 (68%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW PHSQ WM WP ER DNWR+ AQ F VA AI++FEPV
Sbjct: 4 LNTTPRADGFHMPAEWAPHSQTWMVWP---ERPDNWRNGGKPAQAAFTAVAKAIAQFEPV 60
Query: 63 TVCASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TVC SAAQ+ENAR++L + NIR++E++ + +W RDTGPT V N S +V G+D
Sbjct: 61 TVCVSAAQYENARARLDDDNIRLVEITTDDAWVRDTGPTFVTNASG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W D QVARKIL E R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WAFNAWGGFDGGLYWPWLRDDQVARKILEIEGCKRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL++ +IEN L+ +L + +IWLP GL+ DG
Sbjct: 173 ECLLNRNRNPHLSREEIENVLREHLAIDTVIWLPDGLYNDETDG 216
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 56/81 (69%), Gaps = 3/81 (3%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
I DG ++ R RLA SYVNF I NGGI+ P F D K D EA +L + FP++ VV +
Sbjct: 287 IVDG-SQERSPEVRLAGSYVNFLIVNGGIVAPSFDDPK-DEEARAILQRIFPEHRVVMVP 344
Query: 281 RAREIVLGGGNIHCITQQQPA 301
REI+LGGGNIHCITQQQPA
Sbjct: 345 -GREILLGGGNIHCITQQQPA 364
>gi|452750141|ref|ZP_21949893.1| agmatine deiminase [Pseudomonas stutzeri NF13]
gi|452005791|gb|EMD98071.1| agmatine deiminase [Pseudomonas stutzeri NF13]
Length = 393
Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 150/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP GY MPAEW PHSQ WM WP +R DNWRD+ AQ F VA AI++FEPV
Sbjct: 4 LSSTPRQDGYFMPAEWAPHSQAWMVWP---QRPDNWRDNGAPAQAAFTAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TVCASA Q+ AR+ L + IRV+E+S + +W RDTGPT V++ + G+D
Sbjct: 61 TVCASAEQYLAARAALDDPRIRVVELSSDDAWVRDTGPTFVIDDQGG--------LRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y DW D +VARKIL E R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WTFNAWGGEDGGLYADWQRDDEVARKILEIEYCDRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL++ QIE L+ +L V +IIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLSREQIEAVLREHLAVDRIIWLPHGLFNDETDG 216
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 94/177 (53%), Gaps = 25/177 (14%)
Query: 144 VARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQ---- 196
V R+ L+ +R+ PH + + HVD + E LL + +P+ + Q
Sbjct: 192 VLREHLAVDRIIWLPHGLFNDETDGHVDNFCCFVRPGEVLLAWTDDANDPNFARCQAAMT 251
Query: 197 -IENELKAYLGVMKIIWLPRGLFGMIH------------DGEAKPRLAGTRLAASYVNFY 243
+++ A + + +P + G +H DG ++PR RLA SYVNF
Sbjct: 252 VLQSTRDAKGRALTVHKMP--IPGPLHATTEECAGVLALDG-SQPRDPSIRLAGSYVNFL 308
Query: 244 IANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
I NGGII P FGD D EA R+L+Q FP+++V + REI+LGGGNIHCITQQQP
Sbjct: 309 IVNGGIIAPAFGD-PLDAEAERILAQLFPEHQVAMVS-GREILLGGGNIHCITQQQP 363
>gi|399002250|ref|ZP_10704939.1| agmatine deiminase [Pseudomonas sp. GM18]
gi|398125335|gb|EJM14819.1| agmatine deiminase [Pseudomonas sp. GM18]
Length = 368
Score = 243 bits (620), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 127/224 (56%), Positives = 149/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LNSTPRADGFYMPAEWAPQTQTWMVWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RDTGPT V+N S +V G+D
Sbjct: 61 TVAVSAGQYENARTRLDVPNIRVVEMSSDDAWVRDTGPTFVINNSG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QVA KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYSPWNRDSQVAGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPH+ + QIE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHMNREQIEAVLSANLAVDKIIWLPDGLFNDETDG 216
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D DG A +L FP++EVV + RE++LG
Sbjct: 294 RNPTVRLAGSYVNFLIVNGGIIAPSF-DDPLDGPAKEILQSVFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|209964758|ref|YP_002297673.1| agmatine deiminase [Rhodospirillum centenum SW]
gi|209958224|gb|ACI98860.1| agmatine deiminase [Rhodospirillum centenum SW]
Length = 338
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 144/352 (40%), Positives = 190/352 (53%), Gaps = 74/352 (21%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRV-FAKVATAISKFEPVTV 64
PA G+ MPAEW PHS+CWM WPVR E N L A R+ +A+VA AI++FEPVT+
Sbjct: 5 VPASLGFRMPAEWSPHSRCWMAWPVRAETFPN----GLAAARLAYAEVAKAIAQFEPVTM 60
Query: 65 CASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
++ + + V+ ++++ SW RD GPT +VN +G QA G+ W F
Sbjct: 61 LCPESEVAEVSLSCGKGVEVMPLTLSDSWLRDNGPTFLVN----DAGQQA----GVHWGF 112
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL 184
N+WG Y D+ D +VA +IL LPRF +V+EGGS HVDGEGT LTT+ECLL
Sbjct: 113 NAWGR----NYEDFQPDTEVAARILDRLGLPRFVAPLVMEGGSFHVDGEGTLLTTQECLL 168
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRG---------------------LFGMIHD 223
N NRNP L+K +IE L+ +LGV +I+WL RG + + D
Sbjct: 169 NPNRNPGLSKAEIEGHLRDFLGVREILWLERGYEQDETDGHIDEIACFVRPGVVLALTTD 228
Query: 224 GEAKP----------RL------------------------AGTRLAASYVNFYIANGGI 249
A P RL +G RL SY+NFY+ANGG+
Sbjct: 229 DTADPNYPVFRENIERLKASKDAAGRTLEVVTIRTPARKEQSGIRLTLSYINFYLANGGV 288
Query: 250 ITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
+ P F D + D EA R+ + FP +VV + A +IV GGG IHCITQQQPA
Sbjct: 289 VMPAFEDPE-DVEAFRLFRRLFPDRDVVQVP-ALDIVRGGGGIHCITQQQPA 338
>gi|357053688|ref|ZP_09114780.1| agmatine deiminase 1 [Clostridium clostridioforme 2_1_49FAA]
gi|355385314|gb|EHG32366.1| agmatine deiminase 1 [Clostridium clostridioforme 2_1_49FAA]
Length = 349
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 153/363 (42%), Positives = 192/363 (52%), Gaps = 92/363 (25%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MP E+EPH CW+ WP ER DNWR A AQ+VF +VA AIS+FEPVTVC S AQ++N
Sbjct: 1 MPGEFEPHEGCWIIWP---ERPDNWRLGAKPAQKVFVEVAKAISRFEPVTVCVSNAQYDN 57
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
AR QLPE++RV+EMS + SW RD GPT V N + +V G+DW+FN+WGG+ DG
Sbjct: 58 ARCQLPEDVRVVEMSTDDSWIRDCGPTFVTNGT---------EVRGVDWSFNAWGGLVDG 108
Query: 134 CYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVD---------------GEGTCL 177
Y W D VARK+ ER R+ +LEGGSIHVD G + L
Sbjct: 109 LYFPWDKDDHVARKVCDIERKGRYRLDDFILEGGSIHVDGEGTLIVTEECLLSGGRNSHL 168
Query: 178 TTEEC-------------------LLNKNRNPH-------LTKGQI-------------- 197
T EE + N N H + GQ+
Sbjct: 169 TKEEIEDVLKEYLNLEKIIWIPYGIYNDETNGHVDNIIHYIAPGQVILAWTDDKDDPQYD 228
Query: 198 -----------ENELKAYLGVMKIIWLPRGLFGMIHDGEAK---------PRLAGTRLAA 237
E + K + + LP+ + +I GE++ PR+ G RLAA
Sbjct: 229 ICQKAYEVLRAETDAKGRKLNIHKLTLPKNI--LITRGESEGVDAVDGTLPRMEGDRLAA 286
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY NFYIANGG++ P F D+ D +A R L + FP EVVGI AREI+LGGGNIHCITQ
Sbjct: 287 SYANFYIANGGVVFPMFHDEN-DEKARRTLEECFPGREVVGI-YAREILLGGGNIHCITQ 344
Query: 298 QQP 300
QQP
Sbjct: 345 QQP 347
>gi|422652967|ref|ZP_16715742.1| agmatine deiminase [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330966025|gb|EGH66285.1| agmatine deiminase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 368
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/224 (55%), Positives = 149/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+EMS N +W RD+GPT V+N ++ G++
Sbjct: 61 TVAVSAAQYDNARARLDMPNIRVVEMSSNDAWVRDSGPTFVINGRG--------ELRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD QV K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQVGSKVLEIERCPRYATEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIETVLSDYLAVDKIIWLPDGLFNDETDG 216
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++ R RLA SYVNF I NGGII P F D D +A +L + FP++EVV + RE+
Sbjct: 291 SQERNPSVRLAGSYVNFLIVNGGIIAPSF-DDPMDEKAREILQKLFPEHEVV-MAPGREL 348
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHC+TQQQPA
Sbjct: 349 LLGGGNIHCLTQQQPA 364
>gi|422608640|ref|ZP_16680615.1| agmatine deiminase [Pseudomonas syringae pv. mori str. 301020]
gi|330892257|gb|EGH24918.1| agmatine deiminase [Pseudomonas syringae pv. mori str. 301020]
Length = 368
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 150/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVAIAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+EMS N +W RD+GPT V+N +V G++
Sbjct: 61 TVAVSAAQYDNARARLDMPNIRVVEMSSNDAWVRDSGPTFVINDRG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD Q+ RK+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQLGRKVLEIERCPRYVTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V K++WLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIEAILGDYLAVDKVVWLPDGLFNDETDG 216
>gi|443472352|ref|ZP_21062381.1| Agmatine deiminase [Pseudomonas pseudoalcaligenes KF707]
gi|442902694|gb|ELS28210.1| Agmatine deiminase [Pseudomonas pseudoalcaligenes KF707]
Length = 368
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 151/224 (67%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N P G+ MPAEWEPH++ WM WP ER DNWR AQ F VA AI++FEPV
Sbjct: 4 LNSLPRDDGFRMPAEWEPHTRTWMVWP---ERSDNWRLGGKPAQAAFTAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TVC SA Q+ENAR++L E NIRV+E+S + +W RDTGPT V+N +V G+D
Sbjct: 61 TVCVSAGQYENARARLDEPNIRVVEISNDDAWVRDTGPTFVINDQG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+ D QVARKIL E R+ + VLEGGSIHVDGEGT +TTE
Sbjct: 113 WTFNAWGGFDGGLYFPWNRDDQVARKILEIEGCKRYRTNGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L+ L + +IWLP GL+ DG
Sbjct: 173 ECLLNRNRNPHLTREQIEAVLREQLAIDTVIWLPDGLYNDETDG 216
>gi|28872501|ref|NP_795120.1| hypothetical protein PSPTO_5393 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|73622171|sp|Q87UB2.1|AGUA_PSESM RecName: Full=Agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|28855756|gb|AAO58815.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 368
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 149/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVAIAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+EMS N +W RD+GPT V+N ++ G++
Sbjct: 61 TVAVSAAQYDNARARLDMPNIRVVEMSSNDAWVRDSGPTFVINDRG--------ELRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD QV K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQVGSKVLEIERCPRYATQGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIEAVLSDYLAVDKIIWLPDGLFNDETDG 216
>gi|422588169|ref|ZP_16662838.1| agmatine deiminase [Pseudomonas syringae pv. morsprunorum str.
M302280]
gi|330874348|gb|EGH08497.1| agmatine deiminase [Pseudomonas syringae pv. morsprunorum str.
M302280]
Length = 368
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 149/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVAIAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+EMS N +W RD+GPT V+N+ ++ G+
Sbjct: 61 TVAVSAAQYDNARARLDMPNIRVVEMSSNDAWVRDSGPTFVINERG--------ELRGVH 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD QV K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQVGSKVLEIERCPRYATEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIETVLSDYLAVDKIIWLPDGLFNDETDG 216
>gi|407367046|ref|ZP_11113578.1| agmatine deiminase [Pseudomonas mandelii JR-1]
Length = 368
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 126/224 (56%), Positives = 150/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LNSTPRADGFYMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RDTGPT V+N S +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRVVEMSSDDAWVRDTGPTFVINNSG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FNSWGG D G Y W+ D QV KIL ER R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNSWGGFDGGLYSPWNRDSQVGGKILEIERSQRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL++G+IE L A+L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLSRGEIEAVLSAHLAVDKIIWLPDGLFNDETDG 216
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D DG A +L FP++EVV + RE++LG
Sbjct: 294 RNPSVRLAGSYVNFLIVNGGIIAPSF-DDPLDGPAKEILQALFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|398837895|ref|ZP_10595180.1| agmatine deiminase [Pseudomonas sp. GM102]
gi|398117567|gb|EJM07316.1| agmatine deiminase [Pseudomonas sp. GM102]
Length = 368
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 126/224 (56%), Positives = 148/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LNSTPRTDGFYMPAEWAPQTQTWMVWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RDTGPT V+N +V G+D
Sbjct: 61 TVAVSAGQYENARARLDVPNIRVVEMSSDDAWVRDTGPTFVINNRG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QVA KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYSPWNRDSQVAGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPH+ + QIE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHMDRAQIEAVLSANLAVDKIIWLPDGLFNDETDG 216
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D DG A +L FP++EVV + RE++LG
Sbjct: 294 RNPTVRLAGSYVNFLIVNGGIIAPSF-DDPLDGPAKEILQALFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|422300755|ref|ZP_16388264.1| hypothetical protein Pav631_4930 [Pseudomonas avellanae BPIC 631]
gi|407986982|gb|EKG29882.1| hypothetical protein Pav631_4930 [Pseudomonas avellanae BPIC 631]
Length = 368
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 149/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKLAQAAHVAIARAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+EMS N +W RD+GPT V+N ++ G++
Sbjct: 61 TVAVSAAQYDNARARLDMPNIRVVEMSSNDAWVRDSGPTFVINGRG--------ELRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD QV K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQVGSKVLEIERCPRYATEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIETVLSDYLAVDKIIWLPDGLFNDETDG 216
>gi|301383033|ref|ZP_07231451.1| agmatine deiminase [Pseudomonas syringae pv. tomato Max13]
gi|302063438|ref|ZP_07254979.1| agmatine deiminase [Pseudomonas syringae pv. tomato K40]
gi|302130749|ref|ZP_07256739.1| agmatine deiminase [Pseudomonas syringae pv. tomato NCPPB 1108]
Length = 368
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 149/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVAIAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+EMS N +W RD+GPT V+N ++ G++
Sbjct: 61 TVAVSAAQYDNARARLDMPNIRVVEMSSNDAWVRDSGPTFVINDRG--------ELRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD QV K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQVGSKVLEIERCPRYATQGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIEAVLSDYLAVDKIIWLPGGLFNDETDG 216
>gi|398898522|ref|ZP_10648388.1| agmatine deiminase [Pseudomonas sp. GM50]
gi|398184085|gb|EJM71545.1| agmatine deiminase [Pseudomonas sp. GM50]
Length = 368
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 125/224 (55%), Positives = 148/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LNSTPRTDGFYMPAEWAPQTQTWMVWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIR++EMS + +W RDTGPT V+N +V G+D
Sbjct: 61 TVAVSAGQYENARARLDVPNIRLVEMSSDDAWVRDTGPTFVINNGG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QVA KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYSPWNRDSQVAGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPH+ + QIE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHMDRAQIEAVLSANLAVDKIIWLPDGLFNDETDG 216
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D DG A +L FP++EVV + RE++LG
Sbjct: 294 RNPTVRLAGSYVNFLIVNGGIIAPSF-DDPLDGPAKEILQALFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|398857520|ref|ZP_10613219.1| agmatine deiminase [Pseudomonas sp. GM79]
gi|398240801|gb|EJN26469.1| agmatine deiminase [Pseudomonas sp. GM79]
Length = 368
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 125/224 (55%), Positives = 148/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LNSTPRTDGFYMPAEWAPQTQTWMVWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIR++EMS + +W RDTGPT V+N +V G+D
Sbjct: 61 TVAVSAGQYENARARLDVPNIRLVEMSSDDAWVRDTGPTFVINNRG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QVA KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYSPWNRDSQVAGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPH+ + QIE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHMDRAQIEAVLSANLAVDKIIWLPDGLFNDETDG 216
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D DG A +L FP++EVV + RE++LG
Sbjct: 294 RNPTVRLAGSYVNFLIVNGGIIAPSF-DDPLDGPAKEILQALFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|300175037|emb|CBK20348.2| unnamed protein product [Blastocystis hominis]
Length = 367
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 122/219 (55%), Positives = 150/219 (68%), Gaps = 11/219 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ G A G+ PAEW+ H Q WMG+P +R D WR++A AQ+VFA VA AI++FEPV
Sbjct: 4 LPGFAADDGFKAPAEWDVHEQTWMGFP---QRPDIWRENAAPAQKVFANVANAIARFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCA + ARS L +N+RV+EMSMN SWFRDTG V N+ V G +W
Sbjct: 61 TVCAPKELYTVARSLLDKNVRVVEMSMNDSWFRDTGAIFVKNEEGV--------VRGTNW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FNSWGG++ GCY W DL VA K+ + ER+P + ++M+LEGGSI DGEGT LTTEEC
Sbjct: 113 LFNSWGGLNGGCYDYWEDDLLVAGKMCNIERVPYYKYNMILEGGSISFDGEGTLLTTEEC 172
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMI 221
LLN NRNP +TK QIE ELK LGV K+IWLP GLFG +
Sbjct: 173 LLNPNRNPSMTKEQIEAELKRGLGVEKVIWLPNGLFGDV 211
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 210 IIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQ 269
II P G+ + R RL ASYVNFY ANG II+P FG K+ D A +V +
Sbjct: 274 IIRTPEEFAGLTQEEGTIEREENQRLPASYVNFYFANGAIISPCFGVKE-DEMARKVFQE 332
Query: 270 AFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
FP+ EVV + RE++LGGGNIHCITQQQP
Sbjct: 333 VFPEREVVMVP-TREVILGGGNIHCITQQQP 362
>gi|419955804|ref|ZP_14471926.1| agmatine deiminase [Pseudomonas stutzeri TS44]
gi|387967400|gb|EIK51703.1| agmatine deiminase [Pseudomonas stutzeri TS44]
Length = 365
Score = 240 bits (613), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 152/224 (67%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MPAEW PHSQ WM WP ER DNWR+DA AQ+ F VA AI++FEPV
Sbjct: 4 LTSTPRQDGFHMPAEWAPHSQTWMVWP---ERPDNWRNDAGPAQQAFTAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TVCASAAQ+ AR QL + IRV+E+S + +W RDTGPT V++ + G+D
Sbjct: 61 TVCASAAQYLAAREQLDDPRIRVVEISSDDAWVRDTGPTFVIDGKGG--------LRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y DW D +VARKIL ER R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WSFNAWGGEDGGLYADWQRDDEVARKILEIERCERYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNP L++ +IE L +L + K+IWLP GL+ DG
Sbjct: 173 ECLLNRNRNPQLSREEIEAVLAEHLAIDKVIWLPWGLYNDETDG 216
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++ R A RLA SYVNF I NGGI+ P F D +D EA +L + FP+ EVV + REI
Sbjct: 291 SQTRAATIRLAGSYVNFLIVNGGIVAPSF-DDPYDSEAEAILRRLFPEREVVMVP-GREI 348
Query: 286 VLGGGNIHCITQQQP 300
+LGGGNIHCITQQQP
Sbjct: 349 LLGGGNIHCITQQQP 363
>gi|424074616|ref|ZP_17812024.1| hypothetical protein Pav037_4749 [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407994018|gb|EKG34631.1| hypothetical protein Pav037_4749 [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
Length = 368
Score = 240 bits (613), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 149/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVAIAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+EMS N +W RD+GPT V+N +V G++
Sbjct: 61 TVAVSAAQYDNARARLDMPNIRVVEMSSNDAWVRDSGPTFVINDRG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD Q+ K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQLGSKVLEIERCPRYVTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V K+IWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIETILGDYLAVDKVIWLPDGLFNDETDG 216
>gi|300122779|emb|CBK23796.2| unnamed protein product [Blastocystis hominis]
Length = 389
Score = 240 bits (613), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 122/219 (55%), Positives = 150/219 (68%), Gaps = 11/219 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ G A G+ PAEW+ H Q WMG+P +R D WR++A AQ+VFA VA AI++FEPV
Sbjct: 26 LPGFAADDGFKAPAEWDVHEQTWMGFP---QRPDIWRENAAPAQKVFANVANAIARFEPV 82
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCA + ARS L +N+RV+EMSMN SWFRDTG V N+ V G +W
Sbjct: 83 TVCAPKELYTVARSLLDKNVRVVEMSMNDSWFRDTGAIFVKNEEGV--------VRGTNW 134
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FNSWGG++ GCY W DL VA K+ + ER+P + ++M+LEGGSI DGEGT LTTEEC
Sbjct: 135 LFNSWGGLNGGCYDYWEDDLLVAGKMCNIERVPYYKYNMILEGGSISFDGEGTLLTTEEC 194
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMI 221
LLN NRNP +TK QIE ELK LGV K+IWLP GLFG +
Sbjct: 195 LLNPNRNPSMTKEQIEAELKRGLGVEKVIWLPNGLFGDV 233
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 210 IIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQ 269
II P G+ + R RL ASYVNFY ANG II+P FG K+ D A +V +
Sbjct: 296 IIRTPEEFAGLTQEEGTIEREENQRLPASYVNFYFANGAIISPCFGVKE-DEMARKVFQE 354
Query: 270 AFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
FP+ EVV + RE++LGGGNIHCITQQQP
Sbjct: 355 VFPEREVVMVP-TREVILGGGNIHCITQQQP 384
>gi|424069822|ref|ZP_17807266.1| hypothetical protein Pav013_4607 [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|407993858|gb|EKG34481.1| hypothetical protein Pav013_4607 [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
Length = 368
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 149/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVAIAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+EMS N +W RD+GPT V+N +V G++
Sbjct: 61 TVAVSAAQYDNARARLDMPNIRVVEMSSNDAWVRDSGPTFVINDRG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD Q+ K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQLGSKVLEIERCPRYVTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V K+IWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIETILGDYLTVDKVIWLPEGLFNDETDG 216
>gi|418293178|ref|ZP_12905097.1| agmatine deiminase [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379064580|gb|EHY77323.1| agmatine deiminase [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 368
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 147/216 (68%), Gaps = 13/216 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQ 70
GY MPAEW PHSQ WM WP +R DNWRD+ AQ F VA AI++FEPVTVCASA Q
Sbjct: 12 GYFMPAEWAPHSQTWMVWP---QRPDNWRDNGAPAQAAFTAVAKAIARFEPVTVCASAEQ 68
Query: 71 WENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+ AR+ L + IRV+EMS + +W RDTGPT V++ + + G+DW FN+WGG
Sbjct: 69 YLAARAALDDPRIRVVEMSTDDAWVRDTGPTFVIDDNGG--------LRGVDWTFNAWGG 120
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKNR 188
D G Y DW D +VARKIL E R+ VLEGGSIHVDGEGT +TTEECLLN+NR
Sbjct: 121 EDGGLYADWQRDDEVARKILEIEYCDRYRTEGFVLEGGSIHVDGEGTLITTEECLLNRNR 180
Query: 189 NPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
NPHL++ QIE L+ +L V +IIWLP GLF DG
Sbjct: 181 NPHLSREQIEAVLREHLAVDRIIWLPHGLFNDETDG 216
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 93/182 (51%), Gaps = 33/182 (18%)
Query: 144 VARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIENE 200
V R+ L+ +R+ PH + + HVD + E LL + +P+ + Q
Sbjct: 192 VLREHLAVDRIIWLPHGLFNDETDGHVDNFCCFVRPGEVLLAWTDDANDPNFERCQ---- 247
Query: 201 LKAYLGVMKIIWLPRGLFGMIH---------------------DGEAKPRLAGTRLAASY 239
A + V++ RG +H DG ++PR RLA SY
Sbjct: 248 --AAMAVLQTTRDARGRALTVHKMPIPGPLHASAEECAGVLALDG-SQPRDPSIRLAGSY 304
Query: 240 VNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQ 299
VNF I NGGII P FGD D EA R+L+Q FP+++VV + REI+LGGGNIHCITQQQ
Sbjct: 305 VNFLIVNGGIIAPAFGD-PLDAEAERILAQLFPEHQVVMVP-GREILLGGGNIHCITQQQ 362
Query: 300 PA 301
PA
Sbjct: 363 PA 364
>gi|302187444|ref|ZP_07264117.1| agmatine deiminase [Pseudomonas syringae pv. syringae 642]
Length = 368
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 149/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVAIAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+EMS N +W RD+GPT V+N +V G++
Sbjct: 61 TVAVSAAQYDNARARLDMPNIRVVEMSSNDAWVRDSGPTFVINDRG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD Q+ K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQLGSKVLEIERCPRYVTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V K+IWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIETILGDYLAVDKVIWLPDGLFNDETDG 216
>gi|443641625|ref|ZP_21125475.1| Agmatine deiminase [Pseudomonas syringae pv. syringae B64]
gi|443281642|gb|ELS40647.1| Agmatine deiminase [Pseudomonas syringae pv. syringae B64]
Length = 368
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 149/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVAIAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+EMS N +W RD+GPT V+N +V G++
Sbjct: 61 TVAVSAAQYDNARARLDMPNIRVVEMSSNDAWVRDSGPTFVINDRG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD Q+ K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQLGSKVLEIERCPRYVTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V K+IWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIETILGDYLAVDKVIWLPDGLFNDETDG 216
>gi|66048156|ref|YP_237997.1| agmatine deiminase [Pseudomonas syringae pv. syringae B728a]
gi|75500112|sp|Q4ZLL3.1|AGUA_PSEU2 RecName: Full=Agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|63258863|gb|AAY39959.1| agmatine deiminase [Pseudomonas syringae pv. syringae B728a]
Length = 368
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 149/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVAIAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+EMS N +W RD+GPT V+N +V G++
Sbjct: 61 TVAVSAAQYDNARARLDMPNIRVVEMSSNDAWVRDSGPTFVINDRG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD Q+ K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQLGGKVLEIERCPRYVTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V K+IWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIETILGDYLAVDKVIWLPEGLFNDETDG 216
>gi|289672196|ref|ZP_06493086.1| agmatine deiminase [Pseudomonas syringae pv. syringae FF5]
Length = 368
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 149/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVAIAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+EMS N +W RD+GPT V+N +V G++
Sbjct: 61 TVAVSAAQYDNARARLDMPNIRVVEMSSNDAWVRDSGPTFVINDRG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD Q+ K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQLGSKVLEIERCPRYVTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V K+IWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIETILGDYLAVDKVIWLPDGLFNDETDG 216
>gi|422642454|ref|ZP_16705872.1| agmatine deiminase [Pseudomonas syringae Cit 7]
gi|330954836|gb|EGH55096.1| agmatine deiminase [Pseudomonas syringae Cit 7]
Length = 368
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 149/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVAIAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+EMS N +W RD+GPT V+N +V G++
Sbjct: 61 TVAVSAAQYDNARARLDMPNIRVVEMSSNDAWVRDSGPTFVINDRG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD Q+ K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQLGSKVLEIERCPRYVTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V K+IWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIETILGDYLAVDKVIWLPDGLFNDETDG 216
>gi|440723967|ref|ZP_20904317.1| agmatine deiminase [Pseudomonas syringae BRIP34876]
gi|440728760|ref|ZP_20908965.1| agmatine deiminase [Pseudomonas syringae BRIP34881]
gi|440358610|gb|ELP95956.1| agmatine deiminase [Pseudomonas syringae BRIP34876]
gi|440360893|gb|ELP98148.1| agmatine deiminase [Pseudomonas syringae BRIP34881]
Length = 368
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 149/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVAIAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+EMS N +W RD+GPT V+N +V G++
Sbjct: 61 TVAVSAAQYDNARARLDMPNIRVVEMSSNDAWVRDSGPTFVINDRG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD Q+ K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQLGSKVLEIERCPRYVTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V K+IWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIETILGDYLAVDKVIWLPDGLFNDETDG 216
>gi|422668227|ref|ZP_16728085.1| agmatine deiminase [Pseudomonas syringae pv. aptata str. DSM 50252]
gi|330980594|gb|EGH78697.1| agmatine deiminase [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 368
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 149/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVAIAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+EMS N +W RD+GPT V+N +V G++
Sbjct: 61 TVAVSAAQYDNARARLDMPNIRVVEMSSNDAWVRDSGPTFVINDRG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD Q+ K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQLGSKVLEIERCPRYVTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V K+IWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIETILGDYLAVDKVIWLPDGLFNDETDG 216
>gi|388454924|ref|ZP_10137219.1| peptidylarginine deiminase [Fluoribacter dumoffii Tex-KL]
Length = 343
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 137/351 (39%), Positives = 189/351 (53%), Gaps = 72/351 (20%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRV-FAKVATAISKFEPVTV 64
TP G+ MPAEW PH +CWM WP L W L RV +A+VA AI+++EPVT+
Sbjct: 2 TPKQSGFHMPAEWHPHERCWMAWPCH---LQTWSKIGLQKARVAYARVAQAIAQYEPVTM 58
Query: 65 CASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
+ E+A+S + I +I + +N SW RDTGPT ++N + ++AG+DW
Sbjct: 59 LVNPGDEESAKSLCGDTITLISLPINDSWTRDTGPTFLLNNQA--------QLAGVDWIH 110
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL 184
N+WGG Y++ +LD Q+A IL RF +V+EGGS HVDGEGT LT+ ECLL
Sbjct: 111 NAWGGN----YQECALDNQIAGAILKRTHALRFSAPLVMEGGSFHVDGEGTLLTSRECLL 166
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG----------------------MIH 222
N+NRNP L++ +IEN L +LG KIIWL +GL G + H
Sbjct: 167 NENRNPTLSQQEIENYLYDFLGCEKIIWLNKGLVGDETDGHIDEIACFVAPGKVLCLITH 226
Query: 223 DGE-------------------AKPR--------------LAGTRLAASYVNFYIANGGI 249
D + A+ R + G RL SY+NFY+AN GI
Sbjct: 227 DKDDPNYAILHENLETLKSATDAQGRKLEVYTVEQPPATYMHGERLTLSYINFYLANQGI 286
Query: 250 ITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
+ P FG ++ D A ++ +Q +P Y + I+ A ++ GGG IHCITQQQP
Sbjct: 287 VMPAFGYEQQDKAAYQLFTQLYPGYHISQID-ALDVFAGGGGIHCITQQQP 336
>gi|257483689|ref|ZP_05637730.1| agmatine deiminase [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|422682819|ref|ZP_16741083.1| agmatine deiminase [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|331012157|gb|EGH92213.1| agmatine deiminase [Pseudomonas syringae pv. tabaci str. ATCC
11528]
Length = 368
Score = 240 bits (612), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 150/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+EMS N +W RD+GPT V+N+ +V G++
Sbjct: 61 TVAVSAAQYDNARARLDMPNIRVVEMSSNDAWVRDSGPTFVINERG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD Q+ K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQLGSKVLEIERCPRYVTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V K++WLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIEAILGDYLAVDKVVWLPDGLFNDETDG 216
>gi|90409628|ref|ZP_01217645.1| hypothetical protein P3TCK_02656 [Photobacterium profundum 3TCK]
gi|90328981|gb|EAS45238.1| hypothetical protein P3TCK_02656 [Photobacterium profundum 3TCK]
Length = 363
Score = 240 bits (612), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 148/373 (39%), Positives = 191/373 (51%), Gaps = 85/373 (22%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
+++ P G+ MPAE EP S WM WP ER DNWR A AQ F +VA AI+K P
Sbjct: 4 QLSTNPKQDGFRMPAEHEPQSAIWMAWP---ERTDNWRYGAKPAQATFVEVAKAIAKTTP 60
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VT+ SA Q+ENAR LP I+V+EMS + SW RD GP+ VVN G +D
Sbjct: 61 VTMVVSAEQFENARVVLPSYIQVLEMSTDDSWMRDIGPSYVVNDHGERRG--------VD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
W+FN+WGG+ DG Y W D VARK+ T + +VLEGGSIHVDGEGT TTEE
Sbjct: 113 WHFNAWGGLVDGLYFPWDKDDAVARKVCETLGDDSYRAPIVLEGGSIHVDGEGTLYTTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF---------GMIH---------- 222
CLL+ +RNP LT+ +IE+ LKA L + K+IW+P+GL+ +IH
Sbjct: 173 CLLHPSRNPDLTREEIEDVLKANLSIEKVIWIPQGLYNDETNGHVDNLIHVVRPGEIALT 232
Query: 223 --DGEAKPRLAGTRLAAS------------------------YVNFYIANG--------- 247
D E P+ +R A Y++ ANG
Sbjct: 233 WCDDETDPQYIISRKAMDVLLTETDAKGRQIKIHKLPMPGPLYISEDEANGVDVSEGMER 292
Query: 248 ------------------GIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGG 289
+I P D+ D + +L+ +P YEV G+ AREI+LGG
Sbjct: 293 VPGERLAGSYANYLISNKHVIYPLL-DEVHDKDVAMLLADLYPNYEVTGV-NAREILLGG 350
Query: 290 GNIHCITQQQPAI 302
GNIHCITQQ P +
Sbjct: 351 GNIHCITQQIPKV 363
>gi|440745374|ref|ZP_20924669.1| agmatine deiminase [Pseudomonas syringae BRIP39023]
gi|440372741|gb|ELQ09527.1| agmatine deiminase [Pseudomonas syringae BRIP39023]
Length = 368
Score = 239 bits (611), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 149/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVAIAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+EMS N +W RD+GPT V+N +V G++
Sbjct: 61 TVAVSAAQYDNARARLDMPNIRVVEMSSNDAWVRDSGPTFVINDRG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD Q+ K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQLGSKVLEIERCPRYVTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V K+IWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIETILCDYLAVDKVIWLPDGLFNDETDG 216
>gi|146305377|ref|YP_001185842.1| agmatine deiminase [Pseudomonas mendocina ymp]
gi|166919512|sp|A4XP44.1|AGUA_PSEMY RecName: Full=Agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|145573578|gb|ABP83110.1| agmatine deiminase [Pseudomonas mendocina ymp]
Length = 368
Score = 239 bits (611), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 121/224 (54%), Positives = 151/224 (67%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MPAEW PHSQ WM WP ER DNWR+ AQ F VA AI++FEPV
Sbjct: 4 LTTTPRADGFHMPAEWAPHSQTWMVWP---ERPDNWRNGGKPAQAAFTAVAKAIAQFEPV 60
Query: 63 TVCASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TVC SAAQ+ENAR++L + NIR++E++ + +W RDTGPT V+N +V G+D
Sbjct: 61 TVCVSAAQYENARARLDDDNIRLVEITTDDAWVRDTGPTFVINGRG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W D QVARKIL E R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WTFNAWGGFDGGLYWPWQRDDQVARKILDIEGCKRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL++ +IE L+ +L + +IWLP GL+ DG
Sbjct: 173 ECLLNRNRNPHLSREEIEAVLREHLAIDTVIWLPEGLYNDETDG 216
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++ R RLA SYVNF I NGGI+ P F D K D EA +L Q FP++ VV + REI
Sbjct: 291 SQERSPAVRLAGSYVNFLIVNGGIVAPSFDDPK-DAEARAILQQVFPEHRVVMVP-GREI 348
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHCITQQQPA
Sbjct: 349 LLGGGNIHCITQQQPA 364
>gi|73622168|sp|Q6LG16.2|AGUA_PHOPR RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
Length = 363
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 148/373 (39%), Positives = 192/373 (51%), Gaps = 85/373 (22%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
+++ +P G+ MPAE EP S WM WP ER DNWR A AQ F +VA AI+K P
Sbjct: 4 QLSTSPKQDGFRMPAEHEPQSAIWMAWP---ERTDNWRYGAKPAQATFVEVAKAIAKTTP 60
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VT+ SA Q+ENAR LP I+V+EMS + SW RD GP+ VVN K G+D
Sbjct: 61 VTMVVSAEQFENARVVLPSYIQVLEMSTDDSWMRDIGPSYVVNDHG--------KRRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
W+FN+ G + DG Y W D VARK+ T + +VLEGGSIHVDGEGT TTEE
Sbjct: 113 WHFNALGQIGDGLYSPWDKDDAVARKVCETLGDDSYRAPIVLEGGSIHVDGEGTLYTTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF---------GMIH---------- 222
CLL+ +RNP LT+ +IE+ LK L + K+IW+P+GL+ +IH
Sbjct: 173 CLLHPSRNPDLTREEIEDVLKVTLSIEKVIWIPQGLYNDETNGHVDNLIHVVRPGEIALT 232
Query: 223 --DGEAKPRLAGTRLAAS------------------------YVNFYIANG--------- 247
D E P+ +R A Y++ ANG
Sbjct: 233 WCDDETDPQYLISRKAMDVLLTETDAKGRQIKIHKLPMPGPLYISEDEANGVDVSEGMER 292
Query: 248 ------------------GIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGG 289
II P D+K D + +L++ +P YEV G+ AREI+LGG
Sbjct: 293 VPGERLAGSYANYLISNEHIIYPLL-DEKHDKDVAMLLAKLYPNYEVTGV-NAREILLGG 350
Query: 290 GNIHCITQQQPAI 302
GNIHCITQQ P +
Sbjct: 351 GNIHCITQQIPKV 363
>gi|422598830|ref|ZP_16673085.1| agmatine deiminase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|330989102|gb|EGH87205.1| agmatine deiminase [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 368
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 150/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVAIAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+EMS N +W RD+GPT V+N+ +V G++
Sbjct: 61 TVAVSAAQYDNARARLDMPNIRVVEMSSNDAWVRDSGPTFVINERG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD Q+ K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQLGSKVLEIERCPRYVTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V K++WLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIEAILGDYLAVDKVVWLPDGLFNDETDG 216
>gi|422620552|ref|ZP_16689230.1| agmatine deiminase [Pseudomonas syringae pv. japonica str. M301072]
gi|330900910|gb|EGH32329.1| agmatine deiminase [Pseudomonas syringae pv. japonica str. M301072]
Length = 368
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 149/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVAIAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+EMS N +W RD+GPT V+N +V G++
Sbjct: 61 TVAVSAAQYDNARARLDMPNIRVVEMSSNDAWVRDSGPTFVINDRG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD Q+ K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQLGSKVLEIERCPRYVTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V K+IWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIETILGDYLTVDKVIWLPDGLFNDETDG 216
>gi|71734057|ref|YP_272461.1| agmatine deiminase [Pseudomonas syringae pv. phaseolicola 1448A]
gi|123638855|sp|Q48Q55.1|AGUA_PSE14 RecName: Full=Agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|71554610|gb|AAZ33821.1| peptidyl-arginine deiminase-like protein [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 368
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 150/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVAIAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+EMS N +W RD+GPT V+N+ +V G++
Sbjct: 61 TVAVSAAQYDNARARLDVPNIRVVEMSSNDAWVRDSGPTFVINERG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD Q+ K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQLGSKVLEIERCPRYVTKGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V K++WLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIEAILGDYLAVDKVVWLPDGLFNDETDG 216
>gi|416013616|ref|ZP_11561609.1| agmatine deiminase [Pseudomonas syringae pv. glycinea str. B076]
gi|416023797|ref|ZP_11568025.1| agmatine deiminase [Pseudomonas syringae pv. glycinea str. race 4]
gi|422402537|ref|ZP_16479597.1| agmatine deiminase [Pseudomonas syringae pv. glycinea str. race 4]
gi|320326577|gb|EFW82627.1| agmatine deiminase [Pseudomonas syringae pv. glycinea str. B076]
gi|320331101|gb|EFW87073.1| agmatine deiminase [Pseudomonas syringae pv. glycinea str. race 4]
gi|330871972|gb|EGH06121.1| agmatine deiminase [Pseudomonas syringae pv. glycinea str. race 4]
Length = 368
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 150/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVAIAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+EMS N +W RD+GPT V+N+ +V G++
Sbjct: 61 TVAVSAAQYDNARARLDVPNIRVVEMSSNDAWVRDSGPTFVINERG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD Q+ K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQLGSKVLEIERCPRYVTKGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V K++WLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIEAILGDYLAVDKVVWLPDGLFNDETDG 216
>gi|422672838|ref|ZP_16732200.1| agmatine deiminase [Pseudomonas syringae pv. aceris str. M302273]
gi|330970574|gb|EGH70640.1| agmatine deiminase [Pseudomonas syringae pv. aceris str. M302273]
Length = 368
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 149/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVAIAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+EMS N +W RD+GPT V+N +V G++
Sbjct: 61 TVAVSAAQYDNARARLDMPNIRVVEMSSNDAWVRDSGPTFVINDRG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD Q+ K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQLGGKVLEIERCPRYVTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V K+IWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIETILGDYLAVDKVIWLPDGLFNDETDG 216
>gi|298160741|gb|EFI01760.1| Agmatine deiminase [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 368
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 149/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVAIAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+EMS N +W RD+GPT V+N +V G++
Sbjct: 61 TVAVSAAQYDNARARLDMPNIRVVEMSSNDAWVRDSGPTFVINDRG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD Q+ K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQLGSKVLEIERCPRYVTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V K++WLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIEAILGDYLAVDKVVWLPDGLFNDETDG 216
>gi|421505539|ref|ZP_15952477.1| agmatine deiminase [Pseudomonas mendocina DLHK]
gi|400343948|gb|EJO92320.1| agmatine deiminase [Pseudomonas mendocina DLHK]
Length = 368
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/224 (54%), Positives = 150/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MPAEW PHSQ WM WP ER DNWR+ AQ F VA AI++FEPV
Sbjct: 4 LTTTPRADGFHMPAEWAPHSQTWMVWP---ERPDNWRNGGKPAQAAFTAVAKAIAQFEPV 60
Query: 63 TVCASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TVC SAAQ+ENAR++L + NIR++E++ + +W RDTGPT V+N V G+D
Sbjct: 61 TVCVSAAQYENARARLDDDNIRLVEITTDDAWVRDTGPTFVINGRG--------DVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W D QVARKIL E R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WTFNAWGGFDGGLYWPWQRDDQVARKILEIEGCKRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL++ +IE L+ +L + +IWLP GL+ DG
Sbjct: 173 ECLLNRNRNPHLSREEIEAVLREHLAIDTVIWLPDGLYNDETDG 216
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++ R RLA SYVNF I NGGI+ P F D K D EA +L Q FP++ VV + REI
Sbjct: 291 SQERSPEVRLAGSYVNFLIVNGGIVAPSFDDPK-DAEARAILEQVFPEHRVVMVP-GREI 348
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHCITQQQPA
Sbjct: 349 LLGGGNIHCITQQQPA 364
>gi|319652586|ref|ZP_08006700.1| agmatine deiminase [Bacillus sp. 2_A_57_CT2]
gi|317395660|gb|EFV76384.1| agmatine deiminase [Bacillus sp. 2_A_57_CT2]
Length = 365
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/231 (52%), Positives = 151/231 (65%), Gaps = 12/231 (5%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
+ MNGTP G+ MP E+E H WM WPVR D WR A AQRV+ +VA AI++FE
Sbjct: 3 LTMNGTPKKDGFRMPGEFEKHKGTWMLWPVR---TDTWRAGAKPAQRVYVEVAKAIAQFE 59
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
PVT+C Q+ENAR+ LPE+IRVIE+S N +W RD GPT V N +V GI
Sbjct: 60 PVTMCVRPEQFENARALLPEHIRVIEISSNDAWMRDIGPTFVKNDQG--------EVRGI 111
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHS-MVLEGGSIHVDGEGTCLTT 179
DW FN+WGG+++G Y W LDLQV RK+L E + R+ + VLEGG+I VDGEGT +TT
Sbjct: 112 DWGFNAWGGIEEGLYFPWDLDLQVKRKVLEIEHISRYDATEFVLEGGAITVDGEGTLITT 171
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAKPRL 230
E+C+LNKNRN +LTK ++E L +L V KIIWL GL G DG L
Sbjct: 172 EQCVLNKNRNKNLTKEEVEERLSEFLNVEKIIWLKDGLVGDETDGHVDEVL 222
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 218 FGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVV 277
F + + + R ++Y+N Y+ NGG+I P F D + D AV + FP ++V
Sbjct: 283 FEIDYSRHSYERSTHVTFISTYINCYLCNGGVILPTFNDPQ-DEHAVAAFQRMFPDRQIV 341
Query: 278 GIERAREIVLGGGNIHCITQQQP 300
+ RE+ +GGGNIHCITQQQP
Sbjct: 342 TV-NTREVSVGGGNIHCITQQQP 363
>gi|422810930|ref|ZP_16859341.1| agmatine deiminase [Listeria monocytogenes FSL J1-208]
gi|378751135|gb|EHY61726.1| agmatine deiminase [Listeria monocytogenes FSL J1-208]
Length = 364
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 154/372 (41%), Positives = 199/372 (53%), Gaps = 87/372 (23%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ + G+ MP E+E H+ C++ WP ER DNWR A AQ+ F VATAIS+FEPV
Sbjct: 4 IDSSSKKDGFRMPGEFEKHAGCYIIWP---ERPDNWRLGAKPAQKAFVDVATAISRFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV AS++Q+ NAR LP+ IRV+EM + +W RD+GPT VVN S V G+DW
Sbjct: 61 TVVASSSQYINARYMLPDEIRVVEMDNDDAWVRDSGPTFVVNDSG--------DVRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHS-MVLEGGSIHVDGEGT------ 175
+FNSWGG+ DG Y W D QVA+KI ER R+ + VLEGGSIHVDGEGT
Sbjct: 113 SFNSWGGLVDGLYFPWDKDDQVAQKICELERKDRYRLADFVLEGGSIHVDGEGTLVTTEE 172
Query: 176 CLTTE-----------ECLLNKNRNPH----LTKGQIENELKAYL---------GVMKII 211
CL +E E +L + N L +G +E ++ GV+ +
Sbjct: 173 CLLSEGRNPQLSKQQIEMVLKEYLNLEKIIWLKRGIYLDETNGHVDNIFNYVRPGVVALA 232
Query: 212 W----------LPRGLFG------------------------MIHDGEAK---------P 228
W + + F +I D E+K P
Sbjct: 233 WTDDETDPQYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLP 292
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R G RLAASY+N+Y ANGG+I P FGD D A L Q +P +EVVG+ +AREI+LG
Sbjct: 293 REEGDRLAASYINYYTANGGVIFPLFGDPN-DELAREKLQQLYPNFEVVGV-KAREILLG 350
Query: 289 GGNIHCITQQQP 300
GGNIHCITQQ P
Sbjct: 351 GGNIHCITQQVP 362
>gi|409396635|ref|ZP_11247615.1| agmatine deiminase [Pseudomonas sp. Chol1]
gi|409118817|gb|EKM95208.1| agmatine deiminase [Pseudomonas sp. Chol1]
Length = 365
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 152/224 (67%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MPAEW PHSQ WM WP ER DNWR+DA AQ+ F VA AI++FEPV
Sbjct: 4 LTSTPRQDGFHMPAEWAPHSQTWMVWP---ERPDNWRNDAGPAQQAFTTVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TVCASAAQ+ AR QL + IRV+E+S + +W RDTGPT V++ + G+D
Sbjct: 61 TVCASAAQYLAAREQLDDPRIRVVEISSDDAWVRDTGPTFVIDGKGG--------LRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y DW D +VA+KIL ER R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WSFNAWGGEDGGLYADWQRDDEVAQKILELERCERYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNP L++ +IE L +L + K+IWLP GL+ DG
Sbjct: 173 ECLLNRNRNPQLSREEIEAVLTEHLAIDKVIWLPWGLYNDETDG 216
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++ R A RLA SYVNF I NGGI+ P F D D EA +L + FP+ EVV + REI
Sbjct: 291 SQTRAATIRLAGSYVNFLIVNGGIVAPSFDDPH-DSEAEAILRRLFPEREVVMVP-GREI 348
Query: 286 VLGGGNIHCITQQQP 300
+LGGGNIHCITQQQP
Sbjct: 349 LLGGGNIHCITQQQP 363
>gi|422648593|ref|ZP_16711714.1| agmatine deiminase [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330962128|gb|EGH62388.1| agmatine deiminase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 368
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 148/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQIWMVWP---ERPDNWRLGGKPAQAAHVAIAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q++NAR++L NIRV+EMS N +W RD+GPT V+N +V G++
Sbjct: 61 TVAVSAGQYDNARARLDMPNIRVVEMSSNDAWVRDSGPTFVINDRG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG + G Y W+LD Q+ K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFNGGLYAPWNLDSQLGSKVLEIERCPRYATEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIETVLSDYLAVDKIIWLPDGLFNDETDG 216
>gi|270158390|ref|ZP_06187047.1| agmatine deiminase [Legionella longbeachae D-4968]
gi|289163365|ref|YP_003453503.1| peptidylarginine deiminase [Legionella longbeachae NSW150]
gi|269990415|gb|EEZ96669.1| agmatine deiminase [Legionella longbeachae D-4968]
gi|288856538|emb|CBJ10333.1| putative peptidylarginine deiminase and related enzymes [Legionella
longbeachae NSW150]
Length = 341
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/352 (38%), Positives = 188/352 (53%), Gaps = 73/352 (20%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALH-AQRVFAKVATAISKFEPVTV 64
TP G+ MPAEW PH +CWM WP E W L AQ +A+VA AI+++EPVT+
Sbjct: 2 TPKQSGFFMPAEWHPHERCWMAWPCHVE---TWSKIGLQRAQIAYARVAQAIAQYEPVTM 58
Query: 65 CASAAQWENARSQL-PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWN 123
+ E+A+ +NI ++ + +N SW RDTGPT +++K+ ++AG+DW
Sbjct: 59 LVNPGDEESAKDLCGNKNITLLSLPINDSWTRDTGPTFLLDKTQ--------RLAGVDWI 110
Query: 124 FNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECL 183
N+WGG Y+D +LD Q+A I+ + F +V+EGGS HVDGEGT LT+ ECL
Sbjct: 111 HNAWGG----NYQDCALDNQIASAIIKQTQALSFRAPLVMEGGSFHVDGEGTILTSRECL 166
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG------------------- 224
LN+NRNP L++ +IE L +LG KIIWL +GL G DG
Sbjct: 167 LNENRNPQLSQQKIERYLYDFLGGQKIIWLNKGLLGDETDGHIDEIACFIAPGKVLCLIT 226
Query: 225 ----------------------EAKPR--------------LAGTRLAASYVNFYIANGG 248
+AK R + G RL SY+NFY+AN G
Sbjct: 227 DDKKDPNYENLHENLEILKSTTDAKGRKLEVYTVEQPPATYINGERLTLSYINFYLANKG 286
Query: 249 IITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
I+ P FG +K D A ++ +Q FP YE+ ++ ++ GGG IHCITQQQP
Sbjct: 287 IVMPAFGYEKQDKAAYQLFAQLFPNYEITQMD-VLDVFAGGGGIHCITQQQP 337
>gi|237802174|ref|ZP_04590635.1| agmatine deiminase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331025031|gb|EGI05087.1| agmatine deiminase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 368
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 147/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q++NAR++L NIRV+EMS N +W RD+GPT V+N +V G++
Sbjct: 61 TVAVSAGQYDNARARLDMPNIRVVEMSSNDAWVRDSGPTFVINDRG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD Q+ K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQLGSKVLEIERCPRYATEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V K IWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIEAVLSDYLAVDKTIWLPYGLFNDETDG 216
>gi|410091608|ref|ZP_11288164.1| agmatine deiminase [Pseudomonas viridiflava UASWS0038]
gi|409761074|gb|EKN46175.1| agmatine deiminase [Pseudomonas viridiflava UASWS0038]
Length = 368
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 149/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWATQTQVWMVWP---ERPDNWRLGGKPAQAAHIAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+E+S N +W RDTGPT V+N +V G+D
Sbjct: 61 TVAVSAAQYDNARARLDMPNIRVVEISNNDAWVRDTGPTFVINHRG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+LD QVA KI+ ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYAPWNLDSQVASKIMEIERCPRYVTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPH+T+ QIE L L V KI+WLP GLF DG
Sbjct: 173 ECLLNRNRNPHMTREQIETVLSDSLAVDKIVWLPDGLFNDETDG 216
>gi|422660152|ref|ZP_16722569.1| agmatine deiminase [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|331018762|gb|EGH98818.1| agmatine deiminase [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 368
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 148/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWALQTQVWMVWP---ERPDNWRLGGKPAQAAHVAIAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+EMS N +W RD+GPT V+N ++ G++
Sbjct: 61 TVAVSAAQYDNARARLDMPNIRVVEMSSNDAWVRDSGPTFVINDRG--------ELRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD QV K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQVGSKVLEIERCPRYATQGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIEAVLSDYLAVDKIIWLPDGLFNDETDG 216
>gi|384251004|gb|EIE24482.1| agmatine deiminase [Coccomyxa subellipsoidea C-169]
Length = 349
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 116/206 (56%), Positives = 143/206 (69%), Gaps = 6/206 (2%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA-SAAQWE 72
MPAEWEPH QCWMGWP+R DNWR+ A AQ FA V AI+ FEPVTVC + AQ +
Sbjct: 1 MPAEWEPHKQCWMGWPLRP---DNWRNKAQPAQEAFAAVVAAITAFEPVTVCGPNPAQVK 57
Query: 73 NARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDD 132
A +++P V+ M N SWFRD+GPT VV S G + ++AG+DW FN+WGG+
Sbjct: 58 VASTKVPAGTEVLCMYQNDSWFRDSGPTFVVRDKPGSPGER--ELAGVDWVFNAWGGLTG 115
Query: 133 GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
G Y+DW D +A +IL + + R+ S VLEGGSIH DGEGT LTTEECLLN NRNP +
Sbjct: 116 GLYKDWRNDDMIAGRILRLQGVKRYKCSAVLEGGSIHTDGEGTLLTTEECLLNPNRNPSM 175
Query: 193 TKGQIENELKAYLGVMKIIWLPRGLF 218
TK QIE LK YLGV K++WLP+GL+
Sbjct: 176 TKAQIEQMLKDYLGVQKVLWLPKGLY 201
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 10/75 (13%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR AG RLAASYVNFY+ NGG + PQ A+ L + FPK +VVG+ RE++L
Sbjct: 285 PRKAGERLAASYVNFYLPNGGAVIPQ---------ALEGLREVFPKRKVVGVP-TREVLL 334
Query: 288 GGGNIHCITQQQPAI 302
GGGNIHCITQQQPA+
Sbjct: 335 GGGNIHCITQQQPAV 349
>gi|229587857|ref|YP_002869976.1| agmatine deiminase [Pseudomonas fluorescens SBW25]
gi|259710049|sp|C3K5U8.1|AGUA_PSEFS RecName: Full=Agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|229359723|emb|CAY46571.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 368
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 148/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LHSTPRADGFHMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RDTGPT V+N+S +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRVVEMSSDDAWVRDTGPTFVINRSG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D Q+ KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYSPWNRDSQIGGKILEIERAPRYCTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN NRNPHL + QIE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNSNRNPHLDRAQIEAVLSANLAVDKIIWLPDGLFNDETDG 216
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D D +A +L FP++EVV + RE++LG
Sbjct: 294 RNPTVRLAGSYVNFLIVNGGIIAPSF-DDPLDSQAKAILQDLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|398892125|ref|ZP_10645335.1| agmatine deiminase [Pseudomonas sp. GM55]
gi|398186020|gb|EJM73406.1| agmatine deiminase [Pseudomonas sp. GM55]
Length = 368
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 148/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LNSTPRADGFYMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RD+GPT V+N S +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRVVEMSSDDAWVRDSGPTFVINNSG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYSPWNRDSQVGGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPH+ + +IE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHMNRAEIEAVLSANLSVDKIIWLPDGLFNDETDG 216
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D + DG A +L FP++EVV + RE++LG
Sbjct: 294 RNPTVRLAGSYVNFLIVNGGIIAPSFDDPQ-DGPAKEILQNLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|408484420|ref|ZP_11190639.1| agmatine deiminase [Pseudomonas sp. R81]
Length = 368
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 148/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LHSTPRADGFRMPAEWAPQTQVWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RDTGPT V+N S +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRVVEMSSDDAWVRDTGPTFVINDSG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYSPWNRDSQVGGKILEIERTPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL + +IE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLDRAEIEAVLSANLAVDKIIWLPDGLFNDETDG 216
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D D +A +L FP++EVV + RE++LG
Sbjct: 294 RNPTVRLAGSYVNFLIVNGGIIAPSF-DDPLDSQAKAILQDLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|330501310|ref|YP_004378179.1| agmatine deiminase [Pseudomonas mendocina NK-01]
gi|328915596|gb|AEB56427.1| agmatine deiminase [Pseudomonas mendocina NK-01]
Length = 365
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 120/224 (53%), Positives = 152/224 (67%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MPAEWE HS+ WM WP ER DNWR+ AQ F VA AI++FEPV
Sbjct: 4 LTTTPRADGFRMPAEWETHSKTWMVWP---ERPDNWRNGGKPAQAAFTAVAKAIAQFEPV 60
Query: 63 TVCASAAQWENARSQLPEN-IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
T+C SAAQ+ENAR++L ++ IR++E++ + +W RDTGPT V N + +V G+D
Sbjct: 61 TICVSAAQYENARARLDDDAIRLVEITTDDAWVRDTGPTFVTNANG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W D QVARKIL E R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WTFNAWGGFDGGLYWPWLRDDQVARKILEIEGCKRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLNKNRNPHL++ +IEN L+ +L + +IWLP GL+ DG
Sbjct: 173 ECLLNKNRNPHLSREEIENVLRDHLSIDTVIWLPDGLYNDETDG 216
>gi|383935166|ref|ZP_09988604.1| agmatine deiminase [Rheinheimera nanhaiensis E407-8]
gi|383703931|dbj|GAB58695.1| agmatine deiminase [Rheinheimera nanhaiensis E407-8]
Length = 371
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 123/228 (53%), Positives = 148/228 (64%), Gaps = 17/228 (7%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW PH Q WM WP ER D+WR A AQ+ F V AI+ FEPV
Sbjct: 6 LNSTPRADGFSMPAEWAPHKQTWMVWP---ERTDSWRLGAKPAQQAFVAVIKAIAGFEPV 62
Query: 63 TVCASAAQWENARSQLPE-----NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKV 117
TV ASAAQ+ NA SQL + IRV+E+S N +W RDTGPT V N V
Sbjct: 63 TVGASAAQYANALSQLTDVGTKFPIRVVEISNNDAWCRDTGPTFVTNAKG--------DV 114
Query: 118 AGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTC 176
GIDW FN+WGG++ G Y W D QVA K+L E+LPR+ VLEGG+IHVDGEGT
Sbjct: 115 RGIDWTFNAWGGLNGGLYFPWDKDDQVASKVLGIEQLPRYRTEGFVLEGGAIHVDGEGTL 174
Query: 177 LTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LTTEECLLN NRNPHL + QIE +++ YLG+ K++WL G+F DG
Sbjct: 175 LTTEECLLNSNRNPHLNREQIEQQMRDYLGIDKVLWLKDGIFNDETDG 222
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
A PR A RLA SY+NFY+ NGG+I P F D D A +L + +P+++VV + REI
Sbjct: 297 AIPREANARLAGSYINFYLCNGGLILPTFDDPN-DKVAAEILQRLYPEHKVVTVP-GREI 354
Query: 286 VLGGGNIHCITQQQP 300
+LGGGNIHCITQQQP
Sbjct: 355 LLGGGNIHCITQQQP 369
>gi|398870120|ref|ZP_10625470.1| agmatine deiminase [Pseudomonas sp. GM74]
gi|398209519|gb|EJM96192.1| agmatine deiminase [Pseudomonas sp. GM74]
Length = 368
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 148/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LNSTPRADGFYMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RD+GPT V+N S +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRVVEMSSDDAWVRDSGPTFVINNSG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYSPWNRDSQVGGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPH+ + +IE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHMDRAEIEAVLSANLAVDKIIWLPDGLFNDETDG 216
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D + D A +L FP++EVV + RE++LG
Sbjct: 294 RNPTVRLAGSYVNFLIVNGGIIAPSFDDPQ-DDPAKEILQNLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|423694821|ref|ZP_17669311.1| agmatine deiminase [Pseudomonas fluorescens Q8r1-96]
gi|388009501|gb|EIK70752.1| agmatine deiminase [Pseudomonas fluorescens Q8r1-96]
Length = 368
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 150/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MPAEW +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LHSTPRADGFHMPAEWATQTQVWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ+ENAR++L NIR++EMS + +W RDTGPT ++N + A V G+D
Sbjct: 61 TVAVSAAQYENARARLDVPNIRLVEMSSDDAWVRDTGPTFIINDNGA--------VRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QVA KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYAPWNRDAQVAGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL++ +IE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLSREEIEAVLSAQLAVDKIIWLPDGLFNDETDG 216
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++ R RLA SYVNF I NGGII P F D D A +L FP++EVV + RE+
Sbjct: 291 SQERNPTVRLAGSYVNFLIVNGGIIAPSF-DDPLDAPARDILQNLFPQHEVVMVP-GREL 348
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHC+TQQQPA
Sbjct: 349 LLGGGNIHCLTQQQPA 364
>gi|288961600|ref|YP_003451910.1| agmatine deiminase [Azospirillum sp. B510]
gi|288913880|dbj|BAI75366.1| agmatine deiminase [Azospirillum sp. B510]
Length = 343
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 146/350 (41%), Positives = 181/350 (51%), Gaps = 73/350 (20%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQ-RVFAKVATAISKFEPVTVC 65
P G+ MP EW HS CWM WP R E W + A A +A+VA AI++FEPVT+
Sbjct: 9 PTGQGFHMPGEWARHSGCWMAWPCRPE---TWPEGAFDAACDAYAEVAQAIARFEPVTMV 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A A I+++ + ++ SW RDTGP+ VV+ +AG+ W FN
Sbjct: 66 CDPADVAEASLACGPGIQILPLPISDSWIRDTGPSFVVDGKGG--------LAGVHWGFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WGG DGC +D QV R IL +LPRF +V+EGGS HVDGEGT +TTE+CLLN
Sbjct: 118 AWGGNYDGCEKDQ----QVGRLILDHLKLPRFAAPLVMEGGSFHVDGEGTLITTEQCLLN 173
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGL---------------------------- 217
NRNP LT+ +IE LK +LGV +IWL +G
Sbjct: 174 PNRNPGLTREEIERTLKDHLGVETVIWLGQGYQDDETDGHIDEIALFVRPGVVMAITTDD 233
Query: 218 -----FGMIHDG--------EAKPR--------------LAGTRLAASYVNFYIANGGII 250
F + D +AK R L G RL SY N YIANGGI+
Sbjct: 234 PGDPNFKIFQDNLDRLKRARDAKGRELEVIPVQQPARRDLNGVRLTLSYTNLYIANGGIV 293
Query: 251 TPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
P F D D EA RV+ +AFP EVV I A +IV GGG IHCITQQQP
Sbjct: 294 MPAFEDPA-DDEAFRVVRKAFPDREVVQIA-ALDIVRGGGGIHCITQQQP 341
>gi|398881909|ref|ZP_10636882.1| agmatine deiminase [Pseudomonas sp. GM60]
gi|398199928|gb|EJM86859.1| agmatine deiminase [Pseudomonas sp. GM60]
Length = 368
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 147/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LNSTPRADGFYMPAEWAAQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RDTGPT V+N S +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRVVEMSSDDAWVRDTGPTFVINNSG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FNSWGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNSWGGFDGGLYSPWNRDSQVGGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPH+ + +IE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHMNRAEIEAMLSANLAVDKIIWLPDGLFNDETDG 216
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D DG A +L FP++EVV + RE++LG
Sbjct: 294 RNPTVRLAGSYVNFLIVNGGIIAPSF-DDPLDGPAKEILQSLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|398877919|ref|ZP_10633054.1| agmatine deiminase [Pseudomonas sp. GM67]
gi|398201323|gb|EJM88204.1| agmatine deiminase [Pseudomonas sp. GM67]
Length = 368
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 147/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LNSTPRADGFYMPAEWAAQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RDTGPT V+N S +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRVVEMSSDDAWVRDTGPTFVINNSG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FNSWGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNSWGGFDGGLYSPWNRDSQVGGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPH+ + +IE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHMNRAEIEAMLSANLAVDKIIWLPDGLFNDETDG 216
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D DG A +L FP++EVV + RE++LG
Sbjct: 294 RNPTVRLAGSYVNFLIVNGGIIAPSF-DDPLDGPAKEILQSLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|398921123|ref|ZP_10659659.1| agmatine deiminase [Pseudomonas sp. GM49]
gi|398166642|gb|EJM54735.1| agmatine deiminase [Pseudomonas sp. GM49]
Length = 368
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 148/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LNSTPRADGFYMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RD+GPT V+N S +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRVVEMSSDDAWVRDSGPTFVINNSG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYSPWNRDSQVGGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPH+ + +IE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHMNREEIEAVLSANLAVDKIIWLPDGLFNDETDG 216
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D + DG A +L FP++EVV + RE++LG
Sbjct: 294 RNPSVRLAGSYVNFLIVNGGIIAPSFDDPQ-DGPAKEILQNLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|153871389|ref|ZP_02000572.1| peptidylarginine deiminase [Beggiatoa sp. PS]
gi|152072147|gb|EDN69430.1| peptidylarginine deiminase [Beggiatoa sp. PS]
Length = 346
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 135/354 (38%), Positives = 184/354 (51%), Gaps = 70/354 (19%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M TP + + MPAEW PHS CWMGWP R E NW + Q +AKV AI++FE +
Sbjct: 1 MKNTPVIDRFYMPAEWYPHSHCWMGWPCRAE---NWPFELARVQASYAKVIRAIARFESI 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ S + A EN+ I + ++ +W RDTGPT V++ +AGIDW
Sbjct: 58 KMIISPEFKKEAAQLCGENVEFISLPIDDNWLRDTGPTFVIDGQGG--------LAGIDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WG + D+ D+ +A+ +L ++PR+ VLEGG+I VDGEGT LT+EEC
Sbjct: 110 QFNAWGENREN-LADYQQDVILAQHLLEYSQIPRYVAPFVLEGGAICVDGEGTLLTSEEC 168
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL------------------------- 217
LLN NRNP+LT+ IE L YLG+ K++WL +GL
Sbjct: 169 LLNPNRNPNLTRSDIEKLLHDYLGISKVLWLGQGLQDDETAGHIDNLACFVRPGVVVALT 228
Query: 218 --------FGMIHDGEAKPRLA-----------------------GTRLAASYVNFYIAN 246
+ + D + R A G RLA SY+NFYIAN
Sbjct: 229 CHDPQDNNYAPLQDNLHRLRCATDAKGRQLKIIEIEQPAYREDHNGLRLALSYMNFYIAN 288
Query: 247 GGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
GGII P F D D A+ L+Q FP +++V ++ +++ GGG IHCITQQQP
Sbjct: 289 GGIIMPTFSDPA-DKAAIATLTQTFPNHQIVPVD-ILDLIYGGGGIHCITQQQP 340
>gi|398865298|ref|ZP_10620819.1| agmatine deiminase [Pseudomonas sp. GM78]
gi|398243616|gb|EJN29199.1| agmatine deiminase [Pseudomonas sp. GM78]
Length = 368
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 147/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N +P G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LNSSPRADGFYMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RDTGPT V+N S +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRVVEMSSDDAWVRDTGPTFVINNSG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FNSWGG D G Y W+ D QV KIL ER R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNSWGGFDGGLYSPWNRDSQVGGKILEIERSSRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPH+ + QIE LK L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHMNRAQIEAVLKDNLAVDKIIWLPDGLFNDETDG 216
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D DG A +L FP++EVV + RE++LG
Sbjct: 294 RNPSVRLAGSYVNFLIVNGGIIAPSF-DDPLDGPAKEILQTLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|312958396|ref|ZP_07772917.1| Agmatine deiminase [Pseudomonas fluorescens WH6]
gi|311287460|gb|EFQ66020.1| Agmatine deiminase [Pseudomonas fluorescens WH6]
Length = 368
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 148/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LHSTPRADGFHMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RDTGPT V+N + +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRVVEMSSDDAWVRDTGPTFVINNNG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT LTTE
Sbjct: 113 WDFNAWGGFDGGLYAPWNRDSQVGGKILEVERAPRYRTEGFVLEGGSIHVDGEGTLLTTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL + +IE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLDRARIEAVLSANLAVDKIIWLPDGLFNDETDG 216
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++ R RLA SYVNF I NGGII P F D D +A +L FP++EVV + RE+
Sbjct: 291 SQERNPSVRLAGSYVNFLIVNGGIIAPSF-DDPLDSQAKAILQNLFPQHEVVMVP-GREL 348
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHC+TQQQPA
Sbjct: 349 LLGGGNIHCLTQQQPA 364
>gi|426407149|ref|YP_007027248.1| agmatine deiminase [Pseudomonas sp. UW4]
gi|426265366|gb|AFY17443.1| agmatine deiminase [Pseudomonas sp. UW4]
Length = 368
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 148/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LNSTPRADGFYMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RD+GPT V+N S +V G++
Sbjct: 61 TVAVSAGQYENARARLDMPNIRVVEMSSDDAWVRDSGPTFVINNSG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYSPWNRDSQVGGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPH+ + +IE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHMNREEIEAVLSANLAVDKIIWLPDGLFNDETDG 216
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D + DG A +L FP++EVV + RE++LG
Sbjct: 294 RNPTVRLAGSYVNFLIVNGGIIAPCFDDPQ-DGPAKEILQNLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|392423259|ref|YP_006459863.1| agmatine deiminase [Pseudomonas stutzeri CCUG 29243]
gi|390985447|gb|AFM35440.1| agmatine deiminase [Pseudomonas stutzeri CCUG 29243]
Length = 371
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 145/216 (67%), Gaps = 13/216 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQ 70
GY MPAEW PHSQ WM WP +R DNWR++ AQ F VA AI++FEPVTVCASA Q
Sbjct: 12 GYFMPAEWAPHSQAWMVWP---QRPDNWRNNGAPAQAAFTAVAKAIARFEPVTVCASAEQ 68
Query: 71 WENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+ AR+ L + IRV+E+S + +W RDTGPT V++ + G+DW FN+WGG
Sbjct: 69 YLAARAALDDPRIRVVELSTDDAWVRDTGPTFVIDDQGG--------LRGVDWTFNAWGG 120
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKNR 188
D G Y DW D +VARKIL E R+ VLEGGSIHVDGEGT +TTEECLLN+NR
Sbjct: 121 EDGGLYADWQRDDEVARKILELEYCDRYRTEGFVLEGGSIHVDGEGTLITTEECLLNRNR 180
Query: 189 NPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
NPHL++ QIE+ L+ L V IIWLP GLF DG
Sbjct: 181 NPHLSREQIESVLREQLAVDSIIWLPHGLFNDETDG 216
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 96/190 (50%), Gaps = 34/190 (17%)
Query: 144 VARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIENE 200
V R+ L+ + + PH + + HVD + E LL + +P+ + Q
Sbjct: 192 VLREQLAVDSIIWLPHGLFNDETDGHVDNFCCFVRPGEVLLAWTDDANDPNFERCQ---- 247
Query: 201 LKAYLGVMKIIWLPRGLFGMIH---------------------DGEAKPRLAGTRLAASY 239
A + V++ + +G +H DG ++PR RLA SY
Sbjct: 248 --AAMAVLQSVRDAKGRTLTVHKMPIPGPLHATAEECAGVLALDG-SQPRDPSIRLAGSY 304
Query: 240 VNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQ 299
VNF I NGGII P FGD D EA R+L+Q FP++ VV + REI+LGGGNIHCITQQQ
Sbjct: 305 VNFLIVNGGIIAPAFGD-PLDAEAERILAQVFPEHRVVMVP-GREILLGGGNIHCITQQQ 362
Query: 300 PAIPTNAAKL 309
PA P N + +
Sbjct: 363 PA-PLNRSAM 371
>gi|46906269|ref|YP_012658.1| agmatine deiminase [Listeria monocytogenes serotype 4b str. F2365]
gi|47092163|ref|ZP_00229955.1| peptidyl-arginine deiminase-like protein [Listeria monocytogenes
str. 4b H7858]
gi|226222683|ref|YP_002756790.1| hypothetical protein Lm4b_00047b [Listeria monocytogenes serotype
4b str. CLIP 80459]
gi|254824733|ref|ZP_05229734.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|254851796|ref|ZP_05241144.1| predicted protein [Listeria monocytogenes FSL R2-503]
gi|254930823|ref|ZP_05264182.1| agmatine deiminase [Listeria monocytogenes HPB2262]
gi|300765688|ref|ZP_07075665.1| peptidyl-arginine deiminase [Listeria monocytogenes FSL N1-017]
gi|386730807|ref|YP_006204303.1| agmatine deiminase [Listeria monocytogenes 07PF0776]
gi|404279595|ref|YP_006680493.1| agmatine deiminase [Listeria monocytogenes SLCC2755]
gi|404285410|ref|YP_006691996.1| agmatine deiminase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|405748381|ref|YP_006671847.1| agmatine deiminase [Listeria monocytogenes ATCC 19117]
gi|405751251|ref|YP_006674716.1| agmatine deiminase [Listeria monocytogenes SLCC2378]
gi|405754123|ref|YP_006677587.1| agmatine deiminase [Listeria monocytogenes SLCC2540]
gi|406702821|ref|YP_006753175.1| agmatine deiminase [Listeria monocytogenes L312]
gi|417314095|ref|ZP_12100801.1| agmatine deiminase [Listeria monocytogenes J1816]
gi|424712898|ref|YP_007013613.1| Putative agmatine deiminase 1 [Listeria monocytogenes serotype 4b
str. LL195]
gi|424821704|ref|ZP_18246717.1| Putative agmatine deiminase 1 [Listeria monocytogenes str. Scott A]
gi|73622155|sp|Q725C6.1|AGUA1_LISMF RecName: Full=Putative agmatine deiminase 1; AltName: Full=Agmatine
iminohydrolase 1
gi|46879533|gb|AAT02835.1| peptidyl-arginine deiminase-like protein [Listeria monocytogenes
serotype 4b str. F2365]
gi|47019365|gb|EAL10106.1| peptidyl-arginine deiminase-like protein [Listeria monocytogenes
str. 4b H7858]
gi|156602110|gb|ABU86952.1| hypothetical protein lmo0038 [Listeria monocytogenes]
gi|156602118|gb|ABU86956.1| hypothetical protein lmo0038 [Listeria monocytogenes]
gi|156621266|gb|ABU88873.1| conserved hypothetical protein Lmo0038 [Listeria monocytogenes]
gi|225875145|emb|CAS03837.1| unnamed protein product [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258605089|gb|EEW17697.1| predicted protein [Listeria monocytogenes FSL R2-503]
gi|293582365|gb|EFF94397.1| agmatine deiminase [Listeria monocytogenes HPB2262]
gi|293593972|gb|EFG01733.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|300513561|gb|EFK40631.1| peptidyl-arginine deiminase [Listeria monocytogenes FSL N1-017]
gi|328468366|gb|EGF39372.1| agmatine deiminase [Listeria monocytogenes J1816]
gi|332310384|gb|EGJ23479.1| Putative agmatine deiminase 1 [Listeria monocytogenes str. Scott A]
gi|384389565|gb|AFH78635.1| agmatine deiminase [Listeria monocytogenes 07PF0776]
gi|404217581|emb|CBY68945.1| agmatine deiminase [Listeria monocytogenes ATCC 19117]
gi|404220451|emb|CBY71814.1| agmatine deiminase [Listeria monocytogenes SLCC2378]
gi|404223323|emb|CBY74685.1| agmatine deiminase [Listeria monocytogenes SLCC2540]
gi|404226230|emb|CBY47635.1| agmatine deiminase [Listeria monocytogenes SLCC2755]
gi|404244339|emb|CBY02564.1| agmatine deiminase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406359851|emb|CBY66124.1| agmatine deiminase [Listeria monocytogenes L312]
gi|424012082|emb|CCO62622.1| Putative agmatine deiminase 1 [Listeria monocytogenes serotype 4b
str. LL195]
Length = 364
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 153/372 (41%), Positives = 198/372 (53%), Gaps = 87/372 (23%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ + G+ MP E+E H+ C++ WP ER DNWR A AQ+ F VATAIS+FEPV
Sbjct: 4 IDSSSKKDGFRMPGEFEKHAGCYIIWP---ERPDNWRLGAKPAQKAFVDVATAISRFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV AS++Q+ NAR LP+ IRV+EM + +W RD+GPT VVN S V G+DW
Sbjct: 61 TVVASSSQYVNARYMLPDEIRVVEMDNDDAWVRDSGPTFVVNDSG--------DVRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHS-MVLEGGSIHVDGEGT------ 175
+FNSWGG+ DG Y W D QVA+KI ER R+ + VLEGGSIHVDGEGT
Sbjct: 113 SFNSWGGLVDGLYFPWDKDDQVAQKICELERKDRYRLADFVLEGGSIHVDGEGTLVTTEE 172
Query: 176 CLTTE-----------ECLLNKNRNPH----LTKGQIENELKAYL---------GVMKII 211
CL +E E +L + N L +G +E ++ GV+ +
Sbjct: 173 CLLSEGRNPQLSKQQIEMVLKEYLNLEKIIWLKRGIYLDETNGHVDNIFNYVRPGVVALA 232
Query: 212 W----------LPRGLFG------------------------MIHDGEAK---------P 228
W + + F +I D E+K P
Sbjct: 233 WTDDETDPQYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLP 292
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R G RLAASY+N+Y ANGG++ P FGD D A L Q +P EVVG+ +AREI+LG
Sbjct: 293 REEGDRLAASYINYYTANGGVVFPLFGDPN-DELAREKLRQLYPNCEVVGV-KAREILLG 350
Query: 289 GGNIHCITQQQP 300
GGNIHCITQQ P
Sbjct: 351 GGNIHCITQQVP 362
>gi|378948251|ref|YP_005205739.1| protein AguA [Pseudomonas fluorescens F113]
gi|359758265|gb|AEV60344.1| AguA [Pseudomonas fluorescens F113]
Length = 368
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 150/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MPAEW +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LHSTPRADGFHMPAEWAIQTQVWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ+ENAR++L NIR++EMS + +W RDTGPT V+N + +V G+D
Sbjct: 61 TVAVSAAQYENARARLDVPNIRLVEMSSDDAWVRDTGPTFVINDNG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QVA KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYAPWNRDAQVAGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL++ +IE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLSREEIEAVLSAQLAVDKIIWLPDGLFNDETDG 216
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++ R RLA SYVNF I NGGII P F D D A +L FP++EVV + RE+
Sbjct: 291 SQERNPSVRLAGSYVNFLIVNGGIIAPSF-DDPLDASARDILQNLFPQHEVVMVP-GREL 348
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHC+TQQQPA
Sbjct: 349 LLGGGNIHCLTQQQPA 364
>gi|331703672|ref|YP_004400359.1| putative agmatine deiminase [Mycoplasma mycoides subsp. capri LC
str. 95010]
gi|328802227|emb|CBW54381.1| Putative agmatine deiminase [Mycoplasma mycoides subsp. capri LC
str. 95010]
Length = 364
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/217 (53%), Positives = 142/217 (65%), Gaps = 11/217 (5%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++N TP G+ MP EWE H QCWM WP ER DNWR A AQ+VFA VA AI+K+E
Sbjct: 4 KINSTPKKDGFWMPGEWEKHDQCWMIWP---ERSDNWRLGAKPAQKVFANVANAIAKYEK 60
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
+T+ S Q+ENAR+ L EN+RVIEMS + SW RD GPTIV NK ++ G+D
Sbjct: 61 LTMLVSHQQFENARNLLDENVRVIEMSNDDSWMRDVGPTIVKNKDG--------EIRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
W FN+WGG G Y W D +ARK+ + + VLEGGSIH DG+GT TTEE
Sbjct: 113 WVFNAWGGFKGGLYFPWDKDDAIARKVCEISNIDYYRTDFVLEGGSIHTDGDGTLYTTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLLN+NRNP LTK QIE LK Y GV K+IWLP G++
Sbjct: 173 CLLNENRNPDLTKEQIEENLKQYCGVEKVIWLPWGVY 209
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
R+ ASY N+YIAN +I P FGDK +D AV+ L +P +++ + AREI+LGGGNIH
Sbjct: 297 RMPASYANYYIANNAVILPIFGDK-YDDLAVKTLQSVYPNHKIETV-MAREILLGGGNIH 354
Query: 294 CITQQQPA 301
CITQQQP
Sbjct: 355 CITQQQPT 362
>gi|330806987|ref|YP_004351449.1| agmatine deiminase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375095|gb|AEA66445.1| Putative agmatine deiminase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 368
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 149/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MPAEW +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LHSTPRADGFHMPAEWATQTQVWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ+ENAR+ L NIR++EMS + +W RDTGPT ++N + A V G+D
Sbjct: 61 TVAVSAAQYENARACLDVPNIRLVEMSSDDAWVRDTGPTFIINDNGA--------VRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QVA KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYAPWNRDAQVAGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL++ +IE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLSREEIEAVLSAQLAVDKIIWLPDGLFNDETDG 216
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++ R RLA SYVNF I NGGII P F D D A +L FP++EVV + RE+
Sbjct: 291 SQERNPTVRLAGSYVNFLIVNGGIIAPSF-DDPLDAPARDILQNLFPQHEVVMVP-GREL 348
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHC+TQQQPA
Sbjct: 349 LLGGGNIHCLTQQQPA 364
>gi|125971574|gb|ABN58812.1| unknown [Listeria ivanovii]
gi|156621268|gb|ABU88874.1| conserved hypothetical protein Lmo0038 [Listeria ivanovii]
Length = 364
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 152/372 (40%), Positives = 197/372 (52%), Gaps = 87/372 (23%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ + G+ MP E+E H+ C++ WP ER DNWR A AQ+ F VATAISKFEPV
Sbjct: 4 IDSSSKKDGFRMPGEFEKHTGCYIIWP---ERPDNWRLGAKPAQKAFVDVATAISKFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV AS++Q+ NAR +P+ IRV+EM + +W RD GPT V+N S V G+DW
Sbjct: 61 TVVASSSQYVNARYMIPDEIRVVEMDNDDAWVRDCGPTFVINDSG--------DVRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHS-MVLEGGSIHVDGEGT------ 175
+FNSWGG+ DG Y W D QVA+KI ER R+ + VLEGGSIHVDGEGT
Sbjct: 113 SFNSWGGLVDGLYFPWDKDDQVAQKICELERKDRYRLADFVLEGGSIHVDGEGTLVTTEE 172
Query: 176 CLTTE-----------ECLLNKNRNPH----LTKGQIENELKAYL---------GVMKII 211
CL +E E +L + N L +G +E ++ GV+ +
Sbjct: 173 CLLSEGRNPQLSKKQIEMVLKEYLNLEKIIWLKRGIYLDETNGHVDNIFNYVRPGVVALA 232
Query: 212 W----------LPRGLFG------------------------MIHDGEAK---------P 228
W + + F +I D E+K P
Sbjct: 233 WTDDESDPQYEISKECFDILSNETDAKGRKLEVHKIHVPKPILITDEESKGVDAVEGTLP 292
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R G RLAASY+N+Y ANGG++ P FGD D A L Q +P EVVG+ +AREI+LG
Sbjct: 293 REEGDRLAASYINYYTANGGVVFPLFGDPN-DELAREKLQQLYPDREVVGV-KAREILLG 350
Query: 289 GGNIHCITQQQP 300
GGNIHCITQQ P
Sbjct: 351 GGNIHCITQQVP 362
>gi|347547545|ref|YP_004853873.1| hypothetical protein LIV_0036 [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346980616|emb|CBW84517.1| Conserved hypothetical protein [Listeria ivanovii subsp. ivanovii
PAM 55]
Length = 364
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 152/372 (40%), Positives = 197/372 (52%), Gaps = 87/372 (23%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ + G+ MP E+E H+ C++ WP ER DNWR A AQ+ F VATAISKFEPV
Sbjct: 4 IDSSSKKDGFRMPGEFEKHTGCYIIWP---ERPDNWRLGAKPAQKAFVDVATAISKFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV AS++Q+ NAR +P+ IRV+EM + +W RD GPT V+N S V G+DW
Sbjct: 61 TVVASSSQYVNARYMIPDEIRVVEMDNDDAWVRDCGPTFVINDSG--------DVRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHS-MVLEGGSIHVDGEGT------ 175
+FNSWGG+ DG Y W D QVA+KI ER R+ + VLEGGSIHVDGEGT
Sbjct: 113 SFNSWGGLVDGLYFPWDKDDQVAQKICELERKDRYRLADFVLEGGSIHVDGEGTLVTTEE 172
Query: 176 CLTTE-----------ECLLNKNRNPH----LTKGQIENELKAYL---------GVMKII 211
CL +E E +L + N L +G +E ++ GV+ +
Sbjct: 173 CLLSEGRNPQLSKKQIEMVLKEYLNLEKIIWLKRGIYLDETNGHVDNIFNYVRPGVVALA 232
Query: 212 W----------LPRGLFG------------------------MIHDGEAK---------P 228
W + + F +I D E+K P
Sbjct: 233 WTDDESDPQYEISKECFDILSNETDAKGRKLEVHKIHVPKPILITDEESKGVDAVEGTLP 292
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R G RLAASY+N+Y ANGG++ P FGD D A L Q +P EVVG+ +AREI+LG
Sbjct: 293 REEGDRLAASYINYYTANGGVVFPLFGDPN-DELAREKLQQLYPDREVVGV-KAREILLG 350
Query: 289 GGNIHCITQQQP 300
GGNIHCITQQ P
Sbjct: 351 GGNIHCITQQVP 362
>gi|395797215|ref|ZP_10476506.1| agmatine deiminase [Pseudomonas sp. Ag1]
gi|395338639|gb|EJF70489.1| agmatine deiminase [Pseudomonas sp. Ag1]
Length = 368
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 148/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LHSTPRADGFYMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIR++EMS + +W RDTGPT V+N S +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRLVEMSSDDAWVRDTGPTFVINNSG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYSPWNRDSQVGGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL + +IE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLQREEIEVVLSASLAVDKIIWLPDGLFNDETDG 216
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D D A +L FP++EVV + RE++LG
Sbjct: 294 RNPTVRLAGSYVNFLIVNGGIIAPSF-DDPLDSRAKEILQSLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|83319708|ref|YP_424617.1| agmatine deiminase [Mycoplasma capricolum subsp. capricolum ATCC
27343]
gi|313665532|ref|YP_004047403.1| agmatine deiminase [Mycoplasma leachii PG50]
gi|392389130|ref|YP_005907539.1| agmatine deiminase [Mycoplasma leachii 99/014/6]
gi|123535573|sp|Q2SRJ6.1|AGUA_MYCCT RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|83283594|gb|ABC01526.1| peptidylarginine deiminase-related protein, putative [Mycoplasma
capricolum subsp. capricolum ATCC 27343]
gi|312949328|gb|ADR23924.1| agmatine deiminase [Mycoplasma leachii PG50]
gi|339276775|emb|CBV67354.1| Putative agmatine deiminase [Mycoplasma leachii 99/014/6]
Length = 364
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/217 (53%), Positives = 141/217 (64%), Gaps = 11/217 (5%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
+MN TP G+ MP EWE H QCWM WP ER DNWR A AQRVFA VA AI+K+E
Sbjct: 4 KMNSTPKKDGFWMPGEWEKHDQCWMIWP---ERSDNWRLGAKPAQRVFANVANAIAKYEK 60
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VT+ S Q+ENAR+ L +N+RVIE S + SW RD GPTIV NK ++ G+D
Sbjct: 61 VTMLVSHQQFENARNLLDQNVRVIECSNDDSWMRDVGPTIVKNKDG--------EIRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
W FN+WGG G Y W D +ARK+ + + VLEGGSIH DG+GT TTEE
Sbjct: 113 WVFNAWGGFKGGLYFPWDKDDAIARKVCEISNIDYYRTDFVLEGGSIHTDGDGTLYTTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLLN+NRNP L+K QIE LK Y GV K+IWLP G++
Sbjct: 173 CLLNENRNPDLSKEQIEENLKEYCGVEKVIWLPLGVY 209
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
R+ ASY NFYIAN II P FGDK +D AV+ L +P +++ + AREI+LGGGNIH
Sbjct: 297 RMPASYANFYIANNAIILPIFGDK-YDDLAVKTLQSVYPNHKIETV-MAREILLGGGNIH 354
Query: 294 CITQQQPA 301
CITQQQP
Sbjct: 355 CITQQQPT 362
>gi|226946892|ref|YP_002801965.1| agmatine deiminase [Azotobacter vinelandii DJ]
gi|226721819|gb|ACO80990.1| Porphyromonas-type peptidyl-arginine deiminase [Azotobacter
vinelandii DJ]
Length = 372
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 152/224 (67%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++GTP G+ MPAEWEPH+Q WM WP ER DNWR AQ FA VA AI++FEPV
Sbjct: 8 LSGTPRADGFRMPAEWEPHAQTWMLWP---ERPDNWRLGGKPAQAAFATVARAIARFEPV 64
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ+ENA +L +IRV+E+S + +W RDTGPT +V+ + +V G+D
Sbjct: 65 TVGVSAAQYENACVRLAGADIRVVELSSDDAWVRDTGPTFLVDDAG--------EVRGVD 116
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG G Y W+ D QVARKIL ER R+ VLEGG+IHVDGEGT LTTE
Sbjct: 117 WTFNAWGGFAGGLYAPWNRDDQVARKILGIERCARYRTEGFVLEGGAIHVDGEGTLLTTE 176
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN NRNPHL++ +IE L +L V ++IWLP+GL+ DG
Sbjct: 177 ECLLNPNRNPHLSREEIEAVLAGHLAVERVIWLPQGLYNDETDG 220
>gi|5712716|gb|AAD47622.1| unknown [Pseudomonas synxantha BG33R]
Length = 376
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 147/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LHSTPRADGFHMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIR++EMS + +W RDTGPT V+N S +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRLVEMSSDDAWVRDTGPTFVINDSG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYAPWNRDSQVGGKILEIERAPRYRTQGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL + IE L +L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLDRAAIEAVLADHLAVDKIIWLPDGLFNDETDG 216
>gi|398951497|ref|ZP_10674101.1| agmatine deiminase [Pseudomonas sp. GM33]
gi|398156429|gb|EJM44848.1| agmatine deiminase [Pseudomonas sp. GM33]
Length = 368
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 148/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LNSTPRADGFYMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RD+GPT V+N + +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRVVEMSSDDAWVRDSGPTFVINNNG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYSPWNRDSQVGGKILEIERNPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPH+ + +IE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHMNREEIEAVLSANLAVDKIIWLPDGLFNDETDG 216
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D + DG A +L FP++EVV + RE++LG
Sbjct: 294 RNPTVRLAGSYVNFLIVNGGIIAPSFDDPQ-DGPAKEILQNLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|47095106|ref|ZP_00232718.1| peptidyl-arginine deiminase-like protein [Listeria monocytogenes
str. 1/2a F6854]
gi|254913156|ref|ZP_05263168.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254937537|ref|ZP_05269234.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|386045678|ref|YP_005964010.1| agmatine deiminase [Listeria monocytogenes J0161]
gi|47016451|gb|EAL07372.1| peptidyl-arginine deiminase-like protein [Listeria monocytogenes
str. 1/2a F6854]
gi|258610138|gb|EEW22746.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|293591157|gb|EFF99491.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|345532669|gb|AEO02110.1| agmatine deiminase [Listeria monocytogenes J0161]
Length = 364
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 153/372 (41%), Positives = 197/372 (52%), Gaps = 87/372 (23%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ + G+ MP E+E H+ C++ WP ER DNWR A AQ+ F VATAIS FEPV
Sbjct: 4 IDSSSKKDGFRMPGEFEKHAGCYIIWP---ERPDNWRLGAKPAQKAFVDVATAISHFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV AS++Q+ NAR LP+ IRV+EM + +W RD+GPT VVN S V G+DW
Sbjct: 61 TVVASSSQYVNARYMLPDEIRVVEMDNDDAWVRDSGPTFVVNDSG--------DVRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHS-MVLEGGSIHVDGEGT------ 175
+FNSWGG+ DG Y W D QVA+KI ER R+ + VLEGGSIHVDGEGT
Sbjct: 113 SFNSWGGLVDGLYFPWDKDDQVAQKICELERKDRYRLADFVLEGGSIHVDGEGTLVTTEE 172
Query: 176 CLTTE-----------ECLLNKNRNPH----LTKGQIENELKAYL---------GVMKII 211
CL +E E +L + N L +G +E ++ GV+ +
Sbjct: 173 CLLSEGRNPQLSKQQIEMVLKEYLNLEKIIWLKRGIYLDETNGHVDNIFNYVRPGVVALA 232
Query: 212 W----------LPRGLFG------------------------MIHDGEAK---------P 228
W + + F +I D E+K P
Sbjct: 233 WTDDETDPQYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLP 292
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R G RLAASY+N+Y ANGG++ P FGD D A L Q +P EVVG+ +AREI+LG
Sbjct: 293 REEGDRLAASYINYYTANGGVVFPLFGDPN-DELAREKLQQLYPNCEVVGV-KAREILLG 350
Query: 289 GGNIHCITQQQP 300
GGNIHCITQQ P
Sbjct: 351 GGNIHCITQQVP 362
>gi|421140702|ref|ZP_15600699.1| Porphyromonas-type peptidyl-arginine deiminase [Pseudomonas
fluorescens BBc6R8]
gi|404508156|gb|EKA22129.1| Porphyromonas-type peptidyl-arginine deiminase [Pseudomonas
fluorescens BBc6R8]
Length = 368
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 148/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LHSTPRADGFYMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIR++EMS + +W RDTGPT V+N S +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRLVEMSSDDAWVRDTGPTFVINSSG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYSPWNRDSQVGGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL + +IE L A L V K+IWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLQREEIEAVLSANLAVDKVIWLPDGLFNDETDG 216
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D D A +L FP++EVV + RE++LG
Sbjct: 294 RNPTVRLAGSYVNFLIVNGGIIAPSF-DDPLDSHAKEILQNLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|404412150|ref|YP_006697737.1| agmatine deiminase [Listeria monocytogenes SLCC7179]
gi|404237849|emb|CBY59250.1| agmatine deiminase [Listeria monocytogenes SLCC7179]
Length = 364
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 153/372 (41%), Positives = 197/372 (52%), Gaps = 87/372 (23%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ + G+ MP E+E H+ C++ WP ER DNWR A AQ+ F VATAIS FEPV
Sbjct: 4 IDSSSKKDGFRMPGEFEKHAGCYIIWP---ERPDNWRLGAKPAQKAFVDVATAISHFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV AS++Q+ NAR LP+ IRV+EM + +W RD+GPT VVN S V G+DW
Sbjct: 61 TVVASSSQYVNARYMLPDEIRVVEMDNDDAWVRDSGPTFVVNDSG--------DVRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHS-MVLEGGSIHVDGEGT------ 175
+FNSWGG+ DG Y W D QVA+KI ER R+ + VLEGGSIHVDGEGT
Sbjct: 113 SFNSWGGLVDGLYFPWDKDDQVAQKICELERKDRYRLADFVLEGGSIHVDGEGTLVTTEE 172
Query: 176 CLTTE-----------ECLLNKNRNPH----LTKGQIENELKAYL---------GVMKII 211
CL +E E +L + N L +G +E ++ GV+ +
Sbjct: 173 CLLSEGRNPQLSKQQIEMVLKEYLNLEKIIWLKRGIYLDETNGHVDNIFNYVRPGVVALA 232
Query: 212 W----------LPRGLFG------------------------MIHDGEAK---------P 228
W + + F +I D E+K P
Sbjct: 233 WTDDETDPQYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLP 292
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R G RLAASY+N+Y ANGG++ P FGD D A L Q +P EVVG+ +AREI+LG
Sbjct: 293 REEGDRLAASYINYYTANGGVVFPLFGDPN-DELAREKLRQLYPNCEVVGV-KAREILLG 350
Query: 289 GGNIHCITQQQP 300
GGNIHCITQQ P
Sbjct: 351 GGNIHCITQQVP 362
>gi|374260552|ref|ZP_09619149.1| hypothetical protein LDG_5488 [Legionella drancourtii LLAP12]
gi|363539133|gb|EHL32530.1| hypothetical protein LDG_5488 [Legionella drancourtii LLAP12]
Length = 342
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 135/351 (38%), Positives = 185/351 (52%), Gaps = 72/351 (20%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRV-FAKVATAISKFEPVTV 64
TP G+ MPAEW PH +CWM WP LD W L R+ +A+VA AI+++EPVT+
Sbjct: 2 TPKQTGFFMPAEWYPHERCWMAWPCH---LDTWSKIGLDKARLAYARVAHAIAQYEPVTM 58
Query: 65 CASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
E+AR +I + +++N SW RDTGPT ++NK A ++AG++W
Sbjct: 59 LVHPHDEESARRLCGNDITLQTLAINDSWTRDTGPTFLLNK--------AKQLAGVNWIH 110
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL 184
N+WGG Y+D +LD +++ IL + F +V+EGGS HVDGEGT LT+ ECLL
Sbjct: 111 NAWGGN----YQDCALDNEISGVILQKTQALAFSAPLVMEGGSFHVDGEGTILTSRECLL 166
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG----------------------MIH 222
N NRNP L++ +IE L +LG KIIWL +GL G + H
Sbjct: 167 NANRNPQLSQQEIEQHLYDFLGGEKIIWLNKGLLGDETDGHIDEIACFVAPGKVLCLITH 226
Query: 223 DGE-------------------AKPR--------------LAGTRLAASYVNFYIANGGI 249
D E A+ R + G RL SY+NFY+ N GI
Sbjct: 227 DKEDPNYASLHENLEILKSATDAQGRKLAVYTVEQPPATYMDGERLTLSYINFYLGNKGI 286
Query: 250 ITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
+ P FG + D A + SQ +P Y++ I+ A ++ GGG IHCITQQQP
Sbjct: 287 VMPAFGHEAQDKAAYALFSQLYPDYQITQID-ALDVFAGGGGIHCITQQQP 336
>gi|256384461|gb|ACU79031.1| agmatine deiminase [Mycoplasma mycoides subsp. capri str. GM12]
gi|256385294|gb|ACU79863.1| agmatine deiminase [Mycoplasma mycoides subsp. capri str. GM12]
gi|296455471|gb|ADH21706.1| agmatine deiminase [synthetic Mycoplasma mycoides JCVI-syn1.0]
Length = 364
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 117/217 (53%), Positives = 142/217 (65%), Gaps = 11/217 (5%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++N TP G+ MP EWE H QCWM WP ER DNWR A AQ+VFA VA AI+K+E
Sbjct: 4 KINSTPKKDGFWMPGEWEKHDQCWMIWP---ERSDNWRLGAKPAQKVFANVANAIAKYEK 60
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
+T+ S Q+ENAR+ L EN+RVIEMS + SW RD GPTIV NK ++ G+D
Sbjct: 61 LTMLVSHQQFENARNLLDENVRVIEMSNDDSWMRDVGPTIVKNKDG--------EIRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
W FN+WGG G Y W D +ARK+ + + VLEGGSIH DG+GT TTEE
Sbjct: 113 WVFNAWGGFKGGLYFPWDKDDAIARKVCEICNIDYYRTDFVLEGGSIHTDGDGTLYTTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLLN+NRNP LTK QIE LK Y GV K+IWLP G++
Sbjct: 173 CLLNENRNPDLTKEQIEENLKQYCGVEKVIWLPWGVY 209
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
R+ ASY N+YIAN +I P FGDK +D AV+ L +P +++ + AREI+LGGGNIH
Sbjct: 297 RMPASYANYYIANNAVILPIFGDK-YDDLAVKTLQSVYPNHKIETV-MAREILLGGGNIH 354
Query: 294 CITQQQPA 301
CITQQQP
Sbjct: 355 CITQQQPT 362
>gi|433450191|ref|ZP_20412539.1| agmatine deiminase [Mycoplasma sp. G5847]
gi|431933891|gb|ELK20446.1| agmatine deiminase [Mycoplasma sp. G5847]
Length = 364
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 115/218 (52%), Positives = 142/218 (65%), Gaps = 11/218 (5%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++N TP G+ MPAEWE H QCWM WP ER DNWR A AQRVFA VA ISK+E
Sbjct: 4 KLNSTPKQDGFRMPAEWEVHDQCWMIWP---ERTDNWRLGAKPAQRVFANVANTISKYEK 60
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
V++ S Q+E+AR+ L EN+R++EMS + SW RD GPTIV N + ++ G+D
Sbjct: 61 VSMVVSHQQFEHARNLLNENVRLVEMSNDDSWMRDVGPTIVKNSNG--------EIRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
W FN+WGG G Y W D +ARK+ + + VLEGGSIH DG+GT TTEE
Sbjct: 113 WVFNAWGGFKGGLYFPWDKDDAIARKVCEISNIDYYRTDFVLEGGSIHTDGDGTLYTTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
CLLN+NRNP LTK QIE LK Y GV K+IWLP G++
Sbjct: 173 CLLNENRNPDLTKQQIEENLKQYCGVEKVIWLPLGVYN 210
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RL ASY N+YIAN II P FGDK D A+R L +P Y + + AREI+LGGGNIH
Sbjct: 297 RLPASYANYYIANNAIILPIFGDKN-DESAIRTLQSVYPDYTIEPV-MAREILLGGGNIH 354
Query: 294 CITQQQPA 301
CITQQQP
Sbjct: 355 CITQQQPT 362
>gi|374293810|ref|YP_005040833.1| Agmatine deiminase [Azospirillum lipoferum 4B]
gi|357427213|emb|CBS90154.1| Agmatine deiminase [Azospirillum lipoferum 4B]
Length = 343
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 144/351 (41%), Positives = 180/351 (51%), Gaps = 73/351 (20%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQ-RVFAKVATAISKFEPVTV 64
TP G+ MP EW HS CWM WP R E W + A A +A+VA AIS+FEPVT+
Sbjct: 8 TPTGQGFHMPGEWARHSGCWMAWPCRPE---TWPEGAFDAACDAYAEVAQAISRFEPVTM 64
Query: 65 CASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
A A ++++ + ++ SW RDTGP+ VV+ +AG+ W F
Sbjct: 65 VCDPADVAEASLACGPGVQILPLPISDSWIRDTGPSFVVDGKGG--------LAGVHWGF 116
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL 184
N+WGG DGC +D QV R IL +LP F +V+EGGS HVDGEGT +TTE+CLL
Sbjct: 117 NAWGGNYDGCDKD----RQVGRLILDHLKLPCFSAPLVMEGGSFHVDGEGTLITTEQCLL 172
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL--------------------------- 217
N NRNP L+K +IE LK +LG+ +IWL G
Sbjct: 173 NPNRNPGLSKEEIERNLKDHLGIETVIWLGEGYQDDETDGHIDEIALFVRPGVVMAITTD 232
Query: 218 ------FGMIHDG--------EAKPR--------------LAGTRLAASYVNFYIANGGI 249
F + D +AK R + G RL SY N YIANGGI
Sbjct: 233 DPGDPNFKIFQDNLDRLKRARDAKGRELEVIPIQQPARRDMNGVRLTLSYTNLYIANGGI 292
Query: 250 ITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
+ P F D D EA RV+ +AFP EVV I A +IV GGG IHCITQQQP
Sbjct: 293 VMPAFEDPA-DDEAYRVVRKAFPDREVVQIA-AMDIVRGGGGIHCITQQQP 341
>gi|398998368|ref|ZP_10701145.1| agmatine deiminase [Pseudomonas sp. GM21]
gi|398120559|gb|EJM10215.1| agmatine deiminase [Pseudomonas sp. GM21]
Length = 368
Score = 233 bits (595), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 147/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LHTTPRADGFHMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RDTGPT V+NK +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRVVEMSSDDAWVRDTGPTFVINKRG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FNSWGG D G Y W+ D QV KIL ER R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNSWGGFDGGLYSPWNRDSQVGGKILEIERSQRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL + +IE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLDRAEIEAVLSANLAVDKIIWLPDGLFNDETDG 216
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D DG A +L FP++EVV + RE++LG
Sbjct: 294 RNPTVRLAGSYVNFLIVNGGIIAPSF-DDPLDGPAKEILQTLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|388471800|ref|ZP_10146009.1| agmatine deiminase [Pseudomonas synxantha BG33R]
gi|388008497|gb|EIK69763.1| agmatine deiminase [Pseudomonas synxantha BG33R]
Length = 368
Score = 233 bits (594), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 147/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LHSTPRADGFHMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIR++EMS + +W RDTGPT V+N S +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRLVEMSSDDAWVRDTGPTFVINDSG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYAPWNRDSQVGGKILEIERAPRYRTQGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL + IE L +L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLDRAAIEAVLADHLAVDKIIWLPDGLFNDETDG 216
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++ R RLA SYVNF I NGGII P F D D +A ++L FP++EVV + RE+
Sbjct: 291 SQERNPSVRLAGSYVNFLIVNGGIIAPSF-DDPLDHQAKQILQSLFPQHEVVMVP-GREL 348
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHC+TQQQPA
Sbjct: 349 LLGGGNIHCLTQQQPA 364
>gi|42561227|ref|NP_975678.1| agmatine deiminase [Mycoplasma mycoides subsp. mycoides SC str.
PG1]
gi|73622167|sp|Q6MSR8.1|AGUA_MYCMS RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|42492725|emb|CAE77320.1| Conserved hypothetical protein [Mycoplasma mycoides subsp. mycoides
SC str. PG1]
gi|301321436|gb|ADK70079.1| agmatine deiminase [Mycoplasma mycoides subsp. mycoides SC str.
Gladysdale]
Length = 364
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 117/218 (53%), Positives = 140/218 (64%), Gaps = 11/218 (5%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
+MN TP G+ MP EWE H QCWM WP ER DNWR A AQRVF VA AI+K+E
Sbjct: 4 KMNSTPKKDGFWMPGEWEKHDQCWMIWP---ERSDNWRLGAKPAQRVFVNVANAIAKYEK 60
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VT+ S Q+ENAR+ L +N+RVIEMS + SW RD GPTIV NK ++ G+D
Sbjct: 61 VTMLVSHQQFENARNLLDQNVRVIEMSNDDSWMRDVGPTIVKNKDG--------EIRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
W FN+W G G Y W D +ARK+ + + VLEGGSIH DG+GT TTEE
Sbjct: 113 WVFNAWEGFKGGLYFPWDKDDAIARKVCEICNIDYYRTDFVLEGGSIHTDGDGTLYTTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
CLLN+NRNP LTK QIE LK Y GV K+IWLP G++
Sbjct: 173 CLLNENRNPDLTKEQIEENLKEYCGVEKVIWLPLGVYN 210
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
R+ ASY N+YIAN II P FGDK +D AV+ L +P +++ + AREI+LGGGNIH
Sbjct: 297 RMPASYANYYIANNAIILPIFGDK-YDDLAVKTLQSVYPNHKIETV-MAREILLGGGNIH 354
Query: 294 CITQQQPA 301
CITQQQP
Sbjct: 355 CITQQQPT 362
>gi|431929356|ref|YP_007242390.1| agmatine deiminase [Pseudomonas stutzeri RCH2]
gi|431827643|gb|AGA88760.1| agmatine deiminase [Pseudomonas stutzeri RCH2]
Length = 368
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 145/216 (67%), Gaps = 13/216 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQ 70
GY MPAEW PHSQ WM WP +R DNWRD+ AQ F VA AI++FEPVTVCASA +
Sbjct: 12 GYFMPAEWAPHSQTWMVWP---QRPDNWRDNGSPAQAAFTAVAKAIARFEPVTVCASAEE 68
Query: 71 WENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+ AR+ L + IRV+E+S + +W RDTGPT +V+ + + G+DW FN+WGG
Sbjct: 69 YLAARAALNDPRIRVVEISTDDAWVRDTGPTFIVDDNGG--------LRGVDWTFNAWGG 120
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKNR 188
D G Y DW D +VARKIL E R+ VLEGGSIHVDG+GT +TTEECLLN+NR
Sbjct: 121 EDGGLYADWQRDDEVARKILEIEYCDRYRTEGFVLEGGSIHVDGQGTLITTEECLLNRNR 180
Query: 189 NPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
NP LT+ QIE L+ +L V IIWLP GLF DG
Sbjct: 181 NPQLTREQIEAVLREHLAVDSIIWLPHGLFNDETDG 216
>gi|289649200|ref|ZP_06480543.1| agmatine deiminase [Pseudomonas syringae pv. aesculi str. 2250]
Length = 368
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 120/224 (53%), Positives = 147/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWALQTQVWMVWP---ERPDNWRLGGKPAQAAHVAIAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++ AR++L NIRV+EMS N +W RD+GPT V+N +V G++
Sbjct: 61 TVAVSAAQYDTARARLDMPNIRVVEMSSNDAWVRDSGPTFVINDRG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+LD Q+ K+L ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WEFNAWGGFDGGLYAPWNLDSQLGSKVLEIERCPRYVTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L YL V K++WLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREQIEAILGDYLAVDKVVWLPDGLFNDETDG 216
>gi|395496060|ref|ZP_10427639.1| agmatine deiminase [Pseudomonas sp. PAMC 25886]
Length = 368
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 147/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LHSTPRADGFYMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIR++EMS + +W RDTGPT V+N +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRLVEMSSDDAWVRDTGPTFVINNGG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYSPWNRDSQVGGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL + +IE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLGREEIEAVLSANLAVDKIIWLPDGLFNDETDG 216
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D D A +L FP++EVV + RE++LG
Sbjct: 294 RNPTVRLAGSYVNFLIVNGGIIAPSF-DDPLDSRAKEILQNLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|423689392|ref|ZP_17663912.1| agmatine deiminase [Pseudomonas fluorescens SS101]
gi|388000909|gb|EIK62238.1| agmatine deiminase [Pseudomonas fluorescens SS101]
Length = 368
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 146/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LHSTPRADGFHMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RDTGPT V+N S +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRVVEMSNDDAWVRDTGPTFVINGSG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYSPWNRDSQVGGKILEMERTPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL + IE L L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLDRAAIEAVLSDNLAVDKIIWLPDGLFNDETDG 216
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++ R RLA SYVNF I NGGII P F D D +A ++L FP++EVV + RE+
Sbjct: 291 SQERNPTVRLAGSYVNFLIVNGGIIAPSF-DDPLDDQAKQILQNLFPQHEVVMVP-GREL 348
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHC+TQQQPA
Sbjct: 349 LLGGGNIHCLTQQQPA 364
>gi|398939009|ref|ZP_10668228.1| agmatine deiminase [Pseudomonas sp. GM41(2012)]
gi|398164645|gb|EJM52775.1| agmatine deiminase [Pseudomonas sp. GM41(2012)]
Length = 368
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 146/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LHSTPRADGFYMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RDTGPT V+N +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRVVEMSSDDAWVRDTGPTFVINNGG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FNSWGG D G Y W+ D QV KIL ER R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNSWGGFDGGLYSPWNRDSQVGGKILEIERSQRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPH+ + +IE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHMNRAEIEAVLSANLAVDKIIWLPDGLFNDETDG 216
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D DG A +L FP++EVV + RE++LG
Sbjct: 294 RNPTVRLAGSYVNFLIVNGGIIAPSF-DDPLDGPAKEILQALFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|441469586|emb|CCQ19341.1| Putative agmatine deiminase 1 [Listeria monocytogenes]
gi|441472719|emb|CCQ22473.1| Putative agmatine deiminase 1 [Listeria monocytogenes N53-1]
Length = 364
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 153/372 (41%), Positives = 196/372 (52%), Gaps = 87/372 (23%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ + G+ MP E+E H+ C++ WP ER DNWR A AQ+ F VATAIS FEPV
Sbjct: 4 IDSSSKKDGFRMPGEFEKHAGCYIIWP---ERPDNWRLGAKPAQKAFVDVATAISHFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV AS++Q+ NAR L + IRV+EM + +W RD+GPT VVN S V G+DW
Sbjct: 61 TVVASSSQYVNARYMLSDEIRVVEMDNDDAWVRDSGPTFVVNDSG--------DVRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHS-MVLEGGSIHVDGEGT------ 175
+FNSWGG+ DG Y W D QVA+KI ER R+ + VLEGGSIHVDGEGT
Sbjct: 113 SFNSWGGLVDGLYFPWDKDDQVAQKICELERKDRYRLADFVLEGGSIHVDGEGTLVTTEE 172
Query: 176 CLTTE-----------ECLLNKNRNPH----LTKGQIENELKAYL---------GVMKII 211
CL +E E +L + N L +G +E ++ GV+ +
Sbjct: 173 CLLSEGRNPQLSKQQIEMVLKEYLNLEKIIWLKRGIYLDETNGHVDNIFNYVRPGVVALA 232
Query: 212 W----------LPRGLFG------------------------MIHDGEAK---------P 228
W + + F +I D E+K P
Sbjct: 233 WTDDETDPQYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLP 292
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R G RLAASY+N+Y ANGG+I P FGD D A L Q +P EVVG+ +AREI+LG
Sbjct: 293 REEGDRLAASYINYYTANGGVIFPLFGDPN-DELAREKLQQLYPNSEVVGV-KAREILLG 350
Query: 289 GGNIHCITQQQP 300
GGNIHCITQQ P
Sbjct: 351 GGNIHCITQQVP 362
>gi|333898565|ref|YP_004472438.1| agmatine deiminase [Pseudomonas fulva 12-X]
gi|333113830|gb|AEF20344.1| Agmatine deiminase [Pseudomonas fulva 12-X]
Length = 368
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 144/224 (64%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MPAEWEPHSQ WM WP ER DNWR AQ F VA AI++FEPV
Sbjct: 4 LTSTPRADGFRMPAEWEPHSQTWMVWP---ERPDNWRLGGKPAQHAFTAVAKAIAEFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TVC SA Q+ENA + L E IRV+EM+ + +W RDTGPT V NK +V G+D
Sbjct: 61 TVCVSAGQYENACAHLDHERIRVVEMTTDDAWIRDTGPTFVTNKKG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG + G Y W D QVA KIL+ E R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WAFNAWGGFEGGLYFPWLRDDQVASKILNIEGRDRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN NRNPHL + QIE L +L + +IWLP GL+ DG
Sbjct: 173 ECLLNHNRNPHLNREQIEAVLADHLAIDTVIWLPHGLYNDETDG 216
>gi|16802086|ref|NP_463571.1| agmatine deiminase [Listeria monocytogenes EGD-e]
gi|386048967|ref|YP_005966958.1| agmatine deiminase [Listeria monocytogenes FSL R2-561]
gi|404282468|ref|YP_006683365.1| agmatine deiminase [Listeria monocytogenes SLCC2372]
gi|405757025|ref|YP_006686301.1| agmatine deiminase [Listeria monocytogenes SLCC2479]
gi|73622156|sp|Q8YAS5.1|AGUA1_LISMO RecName: Full=Putative agmatine deiminase 1; AltName: Full=Agmatine
iminohydrolase 1
gi|16409397|emb|CAC98253.1| lmo0038 [Listeria monocytogenes EGD-e]
gi|156602108|gb|ABU86951.1| truncated hypothetical protein [Listeria monocytogenes]
gi|346422813|gb|AEO24338.1| agmatine deiminase [Listeria monocytogenes FSL R2-561]
gi|404231970|emb|CBY53373.1| agmatine deiminase [Listeria monocytogenes SLCC2372]
gi|404234907|emb|CBY56309.1| agmatine deiminase [Listeria monocytogenes SLCC2479]
Length = 363
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 153/372 (41%), Positives = 196/372 (52%), Gaps = 87/372 (23%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ + G+ MP E+E H+ C++ WP ER DNWR A AQ+ F VATAIS FEPV
Sbjct: 4 IDSSSKKDGFRMPGEFEKHAGCYIIWP---ERPDNWRLGAKPAQKAFVDVATAISHFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV AS++Q+ NAR L + IRV+EM + +W RD+GPT VVN S V G+DW
Sbjct: 61 TVVASSSQYVNARYMLSDEIRVVEMDNDDAWVRDSGPTFVVNDSG--------DVRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHS-MVLEGGSIHVDGEGT------ 175
+FNSWGG+ DG Y W D QVA+KI ER R+ + VLEGGSIHVDGEGT
Sbjct: 113 SFNSWGGLVDGLYFPWDKDDQVAQKICELERKDRYRLADFVLEGGSIHVDGEGTLVTTEE 172
Query: 176 CLTTE-----------ECLLNKNRNPH----LTKGQIENELKAYL---------GVMKII 211
CL +E E +L + N L +G +E ++ GV+ +
Sbjct: 173 CLLSEGRNPQLSKQQIEMVLKEYLNLEKIIWLKRGIYLDETNGHVDNIFNYVRPGVVALA 232
Query: 212 W----------LPRGLFG------------------------MIHDGEAK---------P 228
W + + F +I D E+K P
Sbjct: 233 WTDDETDPQYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLP 292
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R G RLAASY+N+Y ANGG+I P FGD D A L Q +P EVVG+ +AREI+LG
Sbjct: 293 REEGDRLAASYINYYTANGGVIFPLFGDPN-DELAREKLQQLYPNCEVVGV-KAREILLG 350
Query: 289 GGNIHCITQQQP 300
GGNIHCITQQ P
Sbjct: 351 GGNIHCITQQVP 362
>gi|395651880|ref|ZP_10439730.1| agmatine deiminase [Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 368
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 146/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LHSTPRADGFHMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIR++EMS + +W RDTGPT V+NK +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRLVEMSSDDAWVRDTGPTFVINKRG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYSPWNRDSQVGGKILEIERAPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL + IE L L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLDRAAIEAVLSDNLAVDKIIWLPDGLFNDETDG 216
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D DG+A +L FP++EVV + RE++LG
Sbjct: 294 RNPSVRLAGSYVNFLIVNGGIIAPSF-DDPLDGQAKAILQNLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|170724099|ref|YP_001751787.1| agmatine deiminase [Pseudomonas putida W619]
gi|169762102|gb|ACA75418.1| agmatine deiminase [Pseudomonas putida W619]
Length = 368
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/224 (53%), Positives = 146/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P SQ WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQSQVWMVWP---ERSDNWRLGGKPAQAAHVTLAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR QL NIRV+E+S + +W RDTGPT V+N S +V G+D
Sbjct: 61 TVAVSAGQYENARRQLDLPNIRVVEISNDDAWVRDTGPTFVINDSG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+ D ++A K+L ER R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WGFNAWGGFDGGLYAPWNRDEELAAKVLEMERCQRYQTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL + QIE L+ +L V I+WLP GL+ DG
Sbjct: 173 ECLLNRNRNPHLNREQIEEILREHLAVETIVWLPDGLYNDETDG 216
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 91/176 (51%), Gaps = 19/176 (10%)
Query: 143 QVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIEN 199
++ R+ L+ E + P + + HVD ++ E LL + + +P+ +
Sbjct: 191 EILREHLAVETIVWLPDGLYNDETDGHVDNFCCYVSPGEVLLAWTDDSNDPNYARCHAAY 250
Query: 200 EL-------KAYLGVMKIIWLPRGLF-------GMIHDGEAKPRLAGTRLAASYVNFYIA 245
E+ K V+ + +P LF G+ H ++ R RLA SYVNF I
Sbjct: 251 EVLKNSRDAKGREFVVHKMPIPGPLFATEEECAGVDHVVGSQERDPSVRLAGSYVNFLIV 310
Query: 246 NGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
NGGII P F D D +A +L++ FP +EVV I RE++LGGGNIHC+TQQQPA
Sbjct: 311 NGGIIAPSFNDPA-DAQARAILAKVFPDHEVVMIP-GRELLLGGGNIHCLTQQQPA 364
>gi|386042385|ref|YP_005961190.1| agmatine deiminase [Listeria monocytogenes 10403S]
gi|386052316|ref|YP_005969874.1| agmatine deiminase [Listeria monocytogenes Finland 1998]
gi|404409277|ref|YP_006694865.1| agmatine deiminase [Listeria monocytogenes SLCC5850]
gi|156602112|gb|ABU86953.1| hypothetical protein lmo0038 [Listeria monocytogenes]
gi|156602114|gb|ABU86954.1| hypothetical protein lmo0038 [Listeria monocytogenes]
gi|156602116|gb|ABU86955.1| hypothetical protein lmo0038 [Listeria monocytogenes]
gi|345535619|gb|AEO05059.1| agmatine deiminase [Listeria monocytogenes 10403S]
gi|346644967|gb|AEO37592.1| agmatine deiminase [Listeria monocytogenes Finland 1998]
gi|404229103|emb|CBY50507.1| agmatine deiminase [Listeria monocytogenes SLCC5850]
Length = 364
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 153/372 (41%), Positives = 196/372 (52%), Gaps = 87/372 (23%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ + G+ MP E+E H+ C++ WP ER DNWR A AQ+ F VATAIS FEPV
Sbjct: 4 IDSSSKKDGFRMPGEFEKHAGCYIIWP---ERPDNWRLGAKPAQKAFVDVATAISHFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV AS++Q+ NAR L + IRV+EM + +W RD+GPT VVN S V G+DW
Sbjct: 61 TVVASSSQYVNARYMLSDEIRVVEMDNDDAWVRDSGPTFVVNDSG--------DVRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHS-MVLEGGSIHVDGEGT------ 175
+FNSWGG+ DG Y W D QVA+KI ER R+ + VLEGGSIHVDGEGT
Sbjct: 113 SFNSWGGLVDGLYFPWDKDDQVAQKICELERKDRYRLADFVLEGGSIHVDGEGTLVTTEE 172
Query: 176 CLTTE-----------ECLLNKNRNPH----LTKGQIENELKAYL---------GVMKII 211
CL +E E +L + N L +G +E ++ GV+ +
Sbjct: 173 CLLSEGRNPQLSKQQIEMVLKEYLNLEKIIWLKRGIYLDETNGHVDNIFNYVRPGVVALA 232
Query: 212 W----------LPRGLFG------------------------MIHDGEAK---------P 228
W + + F +I D E+K P
Sbjct: 233 WTDDETDPQYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLP 292
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R G RLAASY+N+Y ANGG+I P FGD D A L Q +P EVVG+ +AREI+LG
Sbjct: 293 REEGDRLAASYINYYTANGGVIFPLFGDPN-DELAREKLQQLYPNCEVVGV-KAREILLG 350
Query: 289 GGNIHCITQQQP 300
GGNIHCITQQ P
Sbjct: 351 GGNIHCITQQVP 362
>gi|374703143|ref|ZP_09710013.1| agmatine deiminase [Pseudomonas sp. S9]
Length = 368
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/224 (53%), Positives = 146/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N P G+ MPAEWE HS+ WM WP +R DNWR AQ+ F VA AI++FEPV
Sbjct: 4 LNTNPRADGFRMPAEWEAHSKTWMVWP---QRPDNWRLGGKPAQQAFTAVAKAIAEFEPV 60
Query: 63 TVCASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TVC SA Q+ENA ++L NIRV+EMS + +W RDTGPT V+N S V G+D
Sbjct: 61 TVCVSAQQYENACARLDHSNIRVVEMSSDDAWVRDTGPTFVINDSG--------DVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG + G Y W+ D QVA KIL E R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WQFNAWGGFNGGLYSPWNRDDQVASKILQIESCARYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN NRNPH+T+ Q E L +L + K+IWLP GL+ DG
Sbjct: 173 ECLLNPNRNPHMTREQTEAVLSQHLAIDKVIWLPDGLYNDETDG 216
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++ R +RLA SYVNF I NGGII P F D + D EA +L Q FP + VV + REI
Sbjct: 291 SQDRHPESRLAGSYVNFLIVNGGIIAPSFDDPR-DEEAKAILGQVFPDHRVVMVP-GREI 348
Query: 286 VLGGGNIHCITQQQPAIPT 304
+LGGGNIHCITQQQPA T
Sbjct: 349 LLGGGNIHCITQQQPAPQT 367
>gi|398962278|ref|ZP_10679177.1| agmatine deiminase [Pseudomonas sp. GM30]
gi|398151271|gb|EJM39829.1| agmatine deiminase [Pseudomonas sp. GM30]
Length = 368
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 146/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LKSTPRDDGFYMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RDTGPT V+N S +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRVVEMSSDDAWVRDTGPTFVINNSG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FNSWGG + G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNSWGGFEGGLYSPWNRDSQVGGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN NRNPHL + +IE L+ L V KIIWLP GLF DG
Sbjct: 173 ECLLNHNRNPHLGREEIEAVLRDNLSVDKIIWLPDGLFNDETDG 216
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D D A +L + FP++EVV + RE++LG
Sbjct: 294 RNPSVRLAGSYVNFLIVNGGIIAPSF-DDPMDAPAREILQKLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|254827469|ref|ZP_05232156.1| agmatine deiminase [Listeria monocytogenes FSL N3-165]
gi|258599846|gb|EEW13171.1| agmatine deiminase [Listeria monocytogenes FSL N3-165]
Length = 364
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 152/372 (40%), Positives = 196/372 (52%), Gaps = 87/372 (23%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ + G+ MP E+E H+ C++ WP ER DNWR A AQ+ F VATAIS FEPV
Sbjct: 4 IDSSSKKDGFRMPGEFEKHAGCYIIWP---ERPDNWRLGAKPAQKAFVDVATAISHFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV AS++Q+ NAR L + IRV+EM + +W RD+GPT VVN S V G+DW
Sbjct: 61 TVVASSSQYVNARYMLSDEIRVVEMDNDDAWVRDSGPTFVVNDSG--------DVRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHS-MVLEGGSIHVDGEGT------ 175
+FNSWGG+ DG Y W D QVA+KI ER R+ + VLEGGSIHVDGEGT
Sbjct: 113 SFNSWGGLVDGLYFPWDKDDQVAQKICELERKDRYRLADFVLEGGSIHVDGEGTLVTTEE 172
Query: 176 CLTTE-----------ECLLNKNRNPH----LTKGQIENELKAYL---------GVMKII 211
CL +E E +L + N L +G +E ++ GV+ +
Sbjct: 173 CLLSEGRNPQLSKQQIEMVLKEYLNLEKIIWLKRGIYLDETNGHVDNIFNYVRPGVVALA 232
Query: 212 W----------LPRGLFG------------------------MIHDGEAK---------P 228
W + + F +I D E+K P
Sbjct: 233 WTDDETDPQYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLP 292
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R G RLAASY+N+Y ANGG++ P FGD D A L Q +P EVVG+ +AREI+LG
Sbjct: 293 REEGDRLAASYINYYTANGGVVFPLFGDPN-DELAREKLRQLYPNCEVVGV-KAREILLG 350
Query: 289 GGNIHCITQQQP 300
GGNIHCITQQ P
Sbjct: 351 GGNIHCITQQVP 362
>gi|325275468|ref|ZP_08141396.1| agmatine deiminase [Pseudomonas sp. TJI-51]
gi|324099399|gb|EGB97317.1| agmatine deiminase [Pseudomonas sp. TJI-51]
Length = 368
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 147/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERSDNWRLGGKPAQAAHVALAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR QL + NIRV+E+S + +W RDTGPT V+N +V G+D
Sbjct: 61 TVAVSAGQYENARRQLDQPNIRVVEISNDDAWVRDTGPTFVINDQG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+ D ++A K+L ER R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WGFNAWGGFDGGLYAPWNRDEELAAKVLEMERCQRYHTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ QIE L+ +L V ++WLP GL+ DG
Sbjct: 173 ECLLNRNRNPHLTREQIEAVLRDHLAVDTVVWLPDGLYNDETDG 216
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G+ H ++ R RLA SYVNF I NGGII P F D D EA +L++ FP +EVV
Sbjct: 284 GVDHVAGSQERDPSVRLAGSYVNFLIVNGGIIAPSFDDPA-DAEARAILARIFPDHEVVM 342
Query: 279 IERAREIVLGGGNIHCITQQQPA 301
I RE++LGGGNIHC+TQQQPA
Sbjct: 343 IP-GRELLLGGGNIHCLTQQQPA 364
>gi|339485196|ref|YP_004699724.1| agmatine deiminase [Pseudomonas putida S16]
gi|338836039|gb|AEJ10844.1| agmatine deiminase [Pseudomonas putida S16]
Length = 368
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 147/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVTLAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR QL + NIRV+E+S + +W RDTGPT V+N +V G+D
Sbjct: 61 TVAVSAGQYENARRQLDQPNIRVVEISNDDAWVRDTGPTFVINDQG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+ D ++A K+L ER R+ S VLEGGSIHVDGEGT +TTE
Sbjct: 113 WGFNAWGGFDGGLYAPWNRDEELAAKVLEMERCQRYHTESFVLEGGSIHVDGEGTVITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL + QIE L+ +L V ++WLP GL+ DG
Sbjct: 173 ECLLNRNRNPHLNREQIEAVLRDHLAVDTVVWLPDGLYNDETDG 216
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 144 VARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIENE 200
V R L+ + + P + + HVD + E LL + + +P+ + E
Sbjct: 192 VLRDHLAVDTVVWLPDGLYNDETDGHVDNFCCYVRPGEVLLAWTDDSNDPNYARCHAAME 251
Query: 201 L-------KAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGT-------RLAASYVNFYIAN 246
+ K ++ + +P LF + ++AG+ RLA SYVNF I N
Sbjct: 252 VLKNTRDAKGREFIVHKMPIPGPLFATAEECAGVDQVAGSQERDPSVRLAGSYVNFLIVN 311
Query: 247 GGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
GGII P F D D EA +L++ FP +EVV I RE++LGGGNIHC+TQQQPA
Sbjct: 312 GGIIAPSFDDPA-DAEARAILAKIFPDHEVVMIP-GRELLLGGGNIHCLTQQQPA 364
>gi|387891536|ref|YP_006321833.1| agmatine deiminase [Pseudomonas fluorescens A506]
gi|387159947|gb|AFJ55146.1| agmatine deiminase [Pseudomonas fluorescens A506]
Length = 368
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 147/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LHSTPRADGFHMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA+Q+ENAR++L NIR++EMS + +W RDTGPT V+N S +V G++
Sbjct: 61 TVAVSASQYENARARLDVPNIRLVEMSNDDAWVRDTGPTFVINGSG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYFPWNRDSQVGGKILEMERAPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL + IE L L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLDRAAIEAVLSDNLAVDKIIWLPDGLFNDETDG 216
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++ R RLA SYVNF I NGGII P F D D +A ++L FP++EVV + RE+
Sbjct: 291 SQERNPTVRLAGSYVNFLIVNGGIIAPSF-DDPLDDQAKQILQNLFPQHEVVMVP-GREL 348
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHC+TQQQPA
Sbjct: 349 LLGGGNIHCLTQQQPA 364
>gi|397695259|ref|YP_006533140.1| Agmatine deiminase [Pseudomonas putida DOT-T1E]
gi|397331989|gb|AFO48348.1| Agmatine deiminase [Pseudomonas putida DOT-T1E]
Length = 368
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 148/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVTLAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV ASA Q+ENAR QL + NIRV+E+S + +W RDTGPT V+N +V G+D
Sbjct: 61 TVAASAGQYENARRQLDQPNIRVVEISNDDAWVRDTGPTFVINDHG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+ D ++A K+L ER R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WGFNAWGGFDGGLYAPWNRDEELAAKVLEMERCQRYQTEGFVLEGGSIHVDGEGTVITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL++ QIE L+ +L V ++WLP GL+ DG
Sbjct: 173 ECLLNRNRNPHLSREQIEAVLRDHLAVDTVVWLPDGLYNDETDG 216
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 89/175 (50%), Gaps = 19/175 (10%)
Query: 144 VARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNP-----HLTKG 195
V R L+ + + P + + HVD + E LL + + +P H
Sbjct: 192 VLRDHLAVDTVVWLPDGLYNDETDGHVDNFCCYVRPGEVLLAWTDDSNDPNYARCHAAMD 251
Query: 196 QIEN--ELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGT-------RLAASYVNFYIAN 246
++N + K ++ + +P LF + ++AG+ RLA SYVNF I N
Sbjct: 252 VLKNTRDAKGREFIVHKMPIPGPLFATAEECAGVDQVAGSQERDPSVRLAGSYVNFLIVN 311
Query: 247 GGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
GGII P F D D EA +L++ FP +EVV I RE++LGGGNIHC+TQQQPA
Sbjct: 312 GGIIAPSFDDPA-DAEARAILARIFPDHEVVMIP-GRELLLGGGNIHCLTQQQPA 364
>gi|148545537|ref|YP_001265639.1| agmatine deiminase [Pseudomonas putida F1]
gi|395446614|ref|YP_006386867.1| agmatine deiminase [Pseudomonas putida ND6]
gi|166919513|sp|A5VX45.1|AGUA_PSEP1 RecName: Full=Agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|148509595|gb|ABQ76455.1| agmatine deiminase [Pseudomonas putida F1]
gi|388560611|gb|AFK69752.1| agmatine deiminase [Pseudomonas putida ND6]
Length = 368
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 148/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVTLAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV ASA Q+ENAR QL + NIRV+E+S + +W RDTGPT V+N +V G+D
Sbjct: 61 TVAASAGQYENARRQLDQPNIRVVEISNDDAWVRDTGPTFVINGHG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+ D ++A K+L ER R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WGFNAWGGFDGGLYAPWNRDEELAAKVLEMERCQRYQTEGFVLEGGSIHVDGEGTVITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL++ QIE L+ +L V ++WLP GL+ DG
Sbjct: 173 ECLLNRNRNPHLSREQIEAVLRDHLAVDTVVWLPDGLYNDETDG 216
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++ R RLA SYVNF I NGGII P F D D EA +L++ FP +EVV I RE+
Sbjct: 291 SQERDPSVRLAGSYVNFLIVNGGIIAPSFDDPA-DAEARAILARIFPDHEVVMIP-GREL 348
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHC+TQQQPA
Sbjct: 349 LLGGGNIHCLTQQQPA 364
>gi|386009924|ref|YP_005928201.1| protein AguA [Pseudomonas putida BIRD-1]
gi|313496630|gb|ADR57996.1| AguA [Pseudomonas putida BIRD-1]
Length = 368
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 148/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVTLAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV ASA Q+ENAR QL + NIRV+E+S + +W RDTGPT V+N +V G+D
Sbjct: 61 TVAASAGQYENARRQLDQPNIRVVEISNDDAWVRDTGPTFVINDHG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+ D ++A K+L ER R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WGFNAWGGFDGGLYAPWNRDEELAAKLLEMERCQRYQTEGFVLEGGSIHVDGEGTVITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL++ QIE L+ +L V ++WLP GL+ DG
Sbjct: 173 ECLLNRNRNPHLSREQIEAVLRDHLAVDTVVWLPDGLYNDETDG 216
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 89/175 (50%), Gaps = 19/175 (10%)
Query: 144 VARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNP-----HLTKG 195
V R L+ + + P + + HVD + E LL + + +P H
Sbjct: 192 VLRDHLAVDTVVWLPDGLYNDETDGHVDNFCCYVRPGEVLLAWTDDSNDPNYARCHAAMD 251
Query: 196 QIEN--ELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGT-------RLAASYVNFYIAN 246
++N + K ++ + +P LF + ++AG+ RLA SYVNF I N
Sbjct: 252 VLKNTRDAKGREFIVHKMPIPGPLFATAEECAGVDQVAGSQERDPSVRLAGSYVNFLIVN 311
Query: 247 GGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
GGII P F D D EA +L++ FP +EVV I RE++LGGGNIHC+TQQQPA
Sbjct: 312 GGIIAPSFDDPA-DAEARAILARIFPDHEVVMIP-GRELLLGGGNIHCLTQQQPA 364
>gi|398848278|ref|ZP_10605101.1| agmatine deiminase [Pseudomonas sp. GM84]
gi|398248802|gb|EJN34200.1| agmatine deiminase [Pseudomonas sp. GM84]
Length = 368
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 120/224 (53%), Positives = 146/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P SQ WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQSQVWMVWP---ERSDNWRLGGKPAQAAHVTLAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR QL NIRV+E+S + +W RDTGPT V+N A +V G+D
Sbjct: 61 TVAVSAGQYENARRQLDLPNIRVVEISNDDAWVRDTGPTFVIN--------DAGEVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+ D ++A K+L ER R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WGFNAWGGFDGGLYAPWNRDEELAAKVLEMERCQRYHTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL + QIE L+ +L V I+WLP GL+ DG
Sbjct: 173 ECLLNRNRNPHLNREQIEAILRDHLAVETIVWLPDGLYNDETDG 216
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 89/175 (50%), Gaps = 19/175 (10%)
Query: 144 VARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIENE 200
+ R L+ E + P + + HVD ++ E LL + + +P+ + E
Sbjct: 192 ILRDHLAVETIVWLPDGLYNDETDGHVDNFCCYVSPGEVLLAWTDDSNDPNYARCHAAYE 251
Query: 201 L-------KAYLGVMKIIWLPRGLF-------GMIHDGEAKPRLAGTRLAASYVNFYIAN 246
+ K V+ + +P LF G+ H ++ R RLA SYVNF I N
Sbjct: 252 VLKNSRDAKGREFVVHKMPIPGPLFATEAECAGVDHVAGSQERDPSVRLAGSYVNFLIVN 311
Query: 247 GGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
GGII P F D D +A +L++ FP +EVV I RE++LGGGNIHC+TQQQPA
Sbjct: 312 GGIIAPSFDDPA-DAQARAILAKVFPNHEVVMIP-GRELLLGGGNIHCLTQQQPA 364
>gi|440740007|ref|ZP_20919506.1| agmatine deiminase [Pseudomonas fluorescens BRIP34879]
gi|440378333|gb|ELQ14956.1| agmatine deiminase [Pseudomonas fluorescens BRIP34879]
Length = 368
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 143/220 (65%), Gaps = 13/220 (5%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
P G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPVTV
Sbjct: 8 PRADGFHMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPVTVAV 64
Query: 67 SAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
SA Q+ENAR++L NIRV+EMS + +W RDTGPT V+N S +V G++W+FN
Sbjct: 65 SAGQYENARARLDVPNIRVVEMSSDDAWVRDTGPTFVINDSG--------EVRGVNWDFN 116
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTEECLL
Sbjct: 117 AWGGFDGGLYAPWNRDTQVGGKILEIERTPRYRTEGFVLEGGSIHVDGEGTVITTEECLL 176
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
N+NRNPH+ + IE L L V KIIWLP GLF DG
Sbjct: 177 NRNRNPHMDRAAIEAVLSDNLAVDKIIWLPDGLFNDETDG 216
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++ R RLA SYVNF I NGGII P F D D +A +L FP++EVV + RE+
Sbjct: 291 SQERNPTVRLAGSYVNFLIVNGGIIAPSF-DDPLDSQARDILRGLFPQHEVVMVP-GREL 348
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHC+TQQQPA
Sbjct: 349 LLGGGNIHCLTQQQPA 364
>gi|447919451|ref|YP_007400019.1| agmatine deiminase [Pseudomonas poae RE*1-1-14]
gi|445203314|gb|AGE28523.1| agmatine deiminase [Pseudomonas poae RE*1-1-14]
Length = 368
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 143/220 (65%), Gaps = 13/220 (5%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
P G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPVTV
Sbjct: 8 PRADGFHMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPVTVAV 64
Query: 67 SAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
SA Q+ENAR++L NIRV+EMS + +W RDTGPT V+N S +V G++W+FN
Sbjct: 65 SAGQYENARARLDVPNIRVVEMSSDDAWVRDTGPTFVINDSG--------EVRGVNWDFN 116
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTEECLL
Sbjct: 117 AWGGFDGGLYAPWNRDTQVGGKILEIERTPRYRTEGFVLEGGSIHVDGEGTVITTEECLL 176
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
N+NRNPH+ + IE L L V KIIWLP GLF DG
Sbjct: 177 NRNRNPHMDRAAIEAVLSDNLAVDKIIWLPDGLFNDETDG 216
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++ R RLA SYVNF I NGGII P F D D +A +L FP++EVV + RE+
Sbjct: 291 SQERNPTVRLAGSYVNFLIVNGGIIAPSF-DDPLDSQARHILQGLFPQHEVVMVP-GREL 348
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHC+TQQQPA
Sbjct: 349 LLGGGNIHCLTQQQPA 364
>gi|167031309|ref|YP_001666540.1| agmatine deiminase [Pseudomonas putida GB-1]
gi|189027500|sp|B0KI18.1|AGUA_PSEPG RecName: Full=Agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|166857797|gb|ABY96204.1| agmatine deiminase [Pseudomonas putida GB-1]
Length = 368
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 146/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVTLAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV ASA Q+ENAR QL + NIRV+E+S + +W RDTGPT V+N +V G+D
Sbjct: 61 TVAASAGQYENARRQLDQPNIRVVEISNDDAWVRDTGPTFVINDHG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+ D ++A K+L ER R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WGFNAWGGFDGGLYAPWNRDEELAAKVLEMERCQRYQTEGFVLEGGSIHVDGEGTVITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPH+ + QIE L+ L V ++WLP GLF DG
Sbjct: 173 ECLLNRNRNPHMNREQIEAVLRDQLAVDTVVWLPDGLFNDETDG 216
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 144 VARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIENE 200
V R L+ + + P + + HVD + E LL + + +P+ + E
Sbjct: 192 VLRDQLAVDTVVWLPDGLFNDETDGHVDNFCCYVRPGEVLLAWTDDSNDPNYARCHAAME 251
Query: 201 L-------KAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGT-------RLAASYVNFYIAN 246
+ K ++ + +P LF + ++AG+ RLA SYVNF I N
Sbjct: 252 VLKNTRDAKGREFIVHKMPIPGPLFATAEECAGVDQVAGSQERDPSVRLAGSYVNFLIVN 311
Query: 247 GGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
GGII P F D D EA +L++ FP +EVV I RE++LGGGNIHC+TQQQPA
Sbjct: 312 GGIIAPSFDDPA-DAEARAILAKIFPDHEVVMIP-GRELLLGGGNIHCLTQQQPA 364
>gi|284803221|ref|YP_003415086.1| agmatine deiminase [Listeria monocytogenes 08-5578]
gi|284996362|ref|YP_003418130.1| agmatine deiminase [Listeria monocytogenes 08-5923]
gi|284058783|gb|ADB69724.1| agmatine deiminase [Listeria monocytogenes 08-5578]
gi|284061829|gb|ADB72768.1| agmatine deiminase [Listeria monocytogenes 08-5923]
Length = 364
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 151/372 (40%), Positives = 195/372 (52%), Gaps = 87/372 (23%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ + G+ MP E+E H+ C++ WP ER DNWR A AQ+ F ATAIS FEPV
Sbjct: 4 IDSSSKKDGFRMPGEFEKHAGCYIIWP---ERPDNWRLGAKPAQKAFVDAATAISHFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV AS++Q+ NAR L + IRV+EM + +W RD+GPT VVN S V G+DW
Sbjct: 61 TVVASSSQYVNARYMLSDEIRVVEMDNDDAWVRDSGPTFVVNDSG--------DVRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHS-MVLEGGSIHVDGEGT------ 175
+FNSWGG+ DG Y W D QVA+KI ER R+ + VLEGGSIHVDGEGT
Sbjct: 113 SFNSWGGLVDGLYFPWDKDDQVAQKICELERKDRYRLADFVLEGGSIHVDGEGTLVTTEE 172
Query: 176 CLTTE-----------ECLLNKNRNPH----LTKGQIENELKAYL---------GVMKII 211
CL +E E +L + N L +G +E ++ GV+ +
Sbjct: 173 CLLSEGRNPQLSKQQIEMVLKEYLNLEKIIWLKRGIYLDETNGHVDNIFNYVRPGVVALA 232
Query: 212 W----------LPRGLFG------------------------MIHDGEAK---------P 228
W + + F +I D E+K P
Sbjct: 233 WTDDETDPQYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLP 292
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R G RLAASY+N+Y ANGG++ P FGD D A L Q +P EVVG+ +AREI+LG
Sbjct: 293 REEGDRLAASYINYYTANGGVVFPLFGDPN-DELAREKLQQLYPNCEVVGV-KAREILLG 350
Query: 289 GGNIHCITQQQP 300
GGNIHCITQQ P
Sbjct: 351 GGNIHCITQQVP 362
>gi|218889032|ref|YP_002437896.1| agmatine deiminase [Pseudomonas aeruginosa LESB58]
gi|254237475|ref|ZP_04930798.1| agmatine deiminase [Pseudomonas aeruginosa C3719]
gi|254243389|ref|ZP_04936711.1| agmatine deiminase [Pseudomonas aeruginosa 2192]
gi|386056356|ref|YP_005972878.1| agmatine deiminase [Pseudomonas aeruginosa M18]
gi|392981700|ref|YP_006480287.1| agmatine deiminase [Pseudomonas aeruginosa DK2]
gi|419756612|ref|ZP_14282958.1| agmatine deiminase [Pseudomonas aeruginosa PADK2_CF510]
gi|421157288|ref|ZP_15616671.1| agmatine deiminase [Pseudomonas aeruginosa ATCC 25324]
gi|421165004|ref|ZP_15623367.1| agmatine deiminase [Pseudomonas aeruginosa ATCC 700888]
gi|424943295|ref|ZP_18359058.1| agmatine deiminase [Pseudomonas aeruginosa NCMG1179]
gi|254802191|sp|B7V2K4.1|AGUA_PSEA8 RecName: Full=Agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|126169406|gb|EAZ54917.1| agmatine deiminase [Pseudomonas aeruginosa C3719]
gi|126196767|gb|EAZ60830.1| agmatine deiminase [Pseudomonas aeruginosa 2192]
gi|218769255|emb|CAW25015.1| agmatine deiminase [Pseudomonas aeruginosa LESB58]
gi|346059741|dbj|GAA19624.1| agmatine deiminase [Pseudomonas aeruginosa NCMG1179]
gi|347302662|gb|AEO72776.1| agmatine deiminase [Pseudomonas aeruginosa M18]
gi|384396985|gb|EIE43402.1| agmatine deiminase [Pseudomonas aeruginosa PADK2_CF510]
gi|392317205|gb|AFM62585.1| agmatine deiminase [Pseudomonas aeruginosa DK2]
gi|404543690|gb|EKA52939.1| agmatine deiminase [Pseudomonas aeruginosa ATCC 700888]
gi|404550770|gb|EKA59493.1| agmatine deiminase [Pseudomonas aeruginosa ATCC 25324]
Length = 368
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 150/221 (67%), Gaps = 13/221 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEWEPH Q WM WP ER DNWR+ AQ FA VA AI++FEPVTVC
Sbjct: 7 TPRADGFRMPAEWEPHEQTWMVWP---ERPDNWRNGGKPAQAAFAAVAKAIARFEPVTVC 63
Query: 66 ASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
ASA Q+ENAR++L + NIRV+E+S + +W RDTGPT V++ V G+DW F
Sbjct: 64 ASAGQYENARARLDDGNIRVVEISSDDAWVRDTGPTFVIDDKG--------DVRGVDWGF 115
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECL 183
N+WGG + G Y W D QVARKIL ER R+ VLEGGSIHVDGEGT +TTEECL
Sbjct: 116 NAWGGFEGGLYFPWQRDDQVARKILEIERRARYRTDDFVLEGGSIHVDGEGTLITTEECL 175
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LN NRNPHL++ +IE L+ YL V IIWLP GL+ DG
Sbjct: 176 LNHNRNPHLSQAEIERTLRDYLAVESIIWLPNGLYNDETDG 216
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++PR RLA SYVNF I NGGII P F D K D EA +L + FP++EVV + REI
Sbjct: 291 SQPRDPSIRLAGSYVNFLIVNGGIIAPSFDDPK-DAEARAILQRVFPEHEVVMVP-GREI 348
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHCITQQQPA
Sbjct: 349 LLGGGNIHCITQQQPA 364
>gi|389686495|ref|ZP_10177816.1| agmatine deiminase [Pseudomonas chlororaphis O6]
gi|388549956|gb|EIM13228.1| agmatine deiminase [Pseudomonas chlororaphis O6]
Length = 368
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 119/224 (53%), Positives = 146/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MPAEW +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LHSTPRADGFYMPAEWATQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIR++EMS + +W RDTGPT V+N +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRLVEMSSDDAWVRDTGPTFVINDKG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYSPWNRDSQVGGKILEIERSPRYRTEGFVLEGGSIHVDGEGTVITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL + +IE L A L V K+IWLP GL+ DG
Sbjct: 173 ECLLNRNRNPHLNRAEIEAVLSANLAVDKVIWLPDGLYNDETDG 216
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D D +A +L FP++EVV + RE++LG
Sbjct: 294 RNPSVRLAGSYVNFLIVNGGIIAPSF-DDPLDAQAKEILQNLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|104779545|ref|YP_606043.1| agmatine deiminase [Pseudomonas entomophila L48]
gi|95108532|emb|CAK13226.1| Agmatine deiminase [Pseudomonas entomophila L48]
Length = 368
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 117/224 (52%), Positives = 147/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVTLAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR QL NIRV+E+S + +W RDTGPT V+N +V G+D
Sbjct: 61 TVAVSAGQYENARRQLDLPNIRVVEISNDDAWVRDTGPTFVINDHG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+ D ++A K++ ER+ R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WGFNAWGGFDGGLYAPWNRDEELAAKVMEMERVQRYHTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL + QIE+ L+ +L V I+WLP GL+ DG
Sbjct: 173 ECLLNRNRNPHLNREQIEDILREHLAVETIVWLPDGLYNDETDG 216
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 89/176 (50%), Gaps = 19/176 (10%)
Query: 143 QVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIEN 199
+ R+ L+ E + P + + HVD ++ E LL + + +P+ +
Sbjct: 191 DILREHLAVETIVWLPDGLYNDETDGHVDNFCCYVSPGEVLLAWTDDSNDPNYARCHAAY 250
Query: 200 EL-------KAYLGVMKIIWLPRGLF-------GMIHDGEAKPRLAGTRLAASYVNFYIA 245
E+ K V+ + +P L+ G+ H ++ R RLA SYVNF I
Sbjct: 251 EVLKNTRDAKGREFVVHKMPIPGPLYATQAECDGVDHVAGSQERDPSVRLAGSYVNFLIV 310
Query: 246 NGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
NGGII P F D D A +L++ FP +EVV I RE++LGGGNIHC+TQQQPA
Sbjct: 311 NGGIIAPSFDDPA-DAPARAILAKVFPDHEVVMIP-GRELLLGGGNIHCLTQQQPA 364
>gi|15595489|ref|NP_248983.1| agmatine deiminase [Pseudomonas aeruginosa PAO1]
gi|416861450|ref|ZP_11914628.1| agmatine deiminase [Pseudomonas aeruginosa 138244]
gi|418584338|ref|ZP_13148400.1| agmatine deiminase [Pseudomonas aeruginosa MPAO1/P1]
gi|418593776|ref|ZP_13157605.1| agmatine deiminase [Pseudomonas aeruginosa MPAO1/P2]
gi|421514904|ref|ZP_15961590.1| agmatine deiminase [Pseudomonas aeruginosa PAO579]
gi|73622169|sp|Q9I6J9.1|AGUA_PSEAE RecName: Full=Agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|9946136|gb|AAG03681.1|AE004467_3 agmatine deiminase [Pseudomonas aeruginosa PAO1]
gi|334836822|gb|EGM15613.1| agmatine deiminase [Pseudomonas aeruginosa 138244]
gi|375045836|gb|EHS38409.1| agmatine deiminase [Pseudomonas aeruginosa MPAO1/P1]
gi|375046154|gb|EHS38720.1| agmatine deiminase [Pseudomonas aeruginosa MPAO1/P2]
gi|404348632|gb|EJZ74969.1| agmatine deiminase [Pseudomonas aeruginosa PAO579]
gi|453045344|gb|EME93064.1| agmatine deiminase [Pseudomonas aeruginosa PA21_ST175]
Length = 368
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 150/221 (67%), Gaps = 13/221 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEWEPH Q WM WP ER DNWR+ AQ FA VA AI++FEPVTVC
Sbjct: 7 TPRADGFRMPAEWEPHEQTWMVWP---ERPDNWRNGGKPAQAAFAAVAKAIARFEPVTVC 63
Query: 66 ASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
ASA Q+ENAR++L + NIRV+E+S + +W RDTGPT V++ V G+DW F
Sbjct: 64 ASAGQYENARARLDDGNIRVVEISSDDAWVRDTGPTFVIDDKG--------DVRGVDWGF 115
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECL 183
N+WGG + G Y W D QVARKIL ER R+ VLEGGSIHVDGEGT +TTEECL
Sbjct: 116 NAWGGFEGGLYFPWQRDDQVARKILEIERRARYRTDDFVLEGGSIHVDGEGTLITTEECL 175
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LN NRNPHL++ +IE L+ YL V IIWLP GL+ DG
Sbjct: 176 LNHNRNPHLSQAEIERTLRDYLAVESIIWLPNGLYNDETDG 216
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++PR RLA SYVNF I NGGII P F D K D EA +L + FP++EVV + REI
Sbjct: 291 SQPRDPSIRLAGSYVNFLIVNGGIIAPSFDDPK-DAEARAILQRVFPEHEVVMVP-GREI 348
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHCITQQQPA
Sbjct: 349 LLGGGNIHCITQQQPA 364
>gi|107099273|ref|ZP_01363191.1| hypothetical protein PaerPA_01000285 [Pseudomonas aeruginosa PACS2]
gi|421181413|ref|ZP_15638918.1| agmatine deiminase [Pseudomonas aeruginosa E2]
gi|451984073|ref|ZP_21932332.1| Agmatine deiminase [Pseudomonas aeruginosa 18A]
gi|404543745|gb|EKA52983.1| agmatine deiminase [Pseudomonas aeruginosa E2]
gi|451758309|emb|CCQ84855.1| Agmatine deiminase [Pseudomonas aeruginosa 18A]
Length = 368
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 150/221 (67%), Gaps = 13/221 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEWEPH Q WM WP ER DNWR+ AQ FA VA AI++FEPVTVC
Sbjct: 7 TPRADGFRMPAEWEPHEQTWMVWP---ERPDNWRNGGKPAQAAFAAVAKAIARFEPVTVC 63
Query: 66 ASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
ASA Q+ENAR++L + NIRV+E+S + +W RDTGPT V++ V G+DW F
Sbjct: 64 ASAGQYENARARLDDGNIRVVEISSDDAWVRDTGPTFVIDDKG--------DVRGVDWGF 115
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECL 183
N+WGG + G Y W D QVARKIL ER R+ VLEGGSIHVDGEGT +TTEECL
Sbjct: 116 NAWGGFEGGLYFPWQRDDQVARKILEIERRARYRTDDFVLEGGSIHVDGEGTLITTEECL 175
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LN NRNPHL++ +IE L+ YL V IIWLP GL+ DG
Sbjct: 176 LNHNRNPHLSQAEIERTLRDYLAVESIIWLPNGLYNDETDG 216
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++PR RLA SYVNF I NGGI+ P F D K D EA +L + FP++EVV + REI
Sbjct: 291 SQPRDPSIRLAGSYVNFLIVNGGIVAPSFDDPK-DAEARAILQRVFPEHEVVMVP-GREI 348
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHCITQQQPA
Sbjct: 349 LLGGGNIHCITQQQPA 364
>gi|26987008|ref|NP_742433.1| agmatine deiminase [Pseudomonas putida KT2440]
gi|73622170|sp|Q88R68.1|AGUA_PSEPK RecName: Full=Agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|24981625|gb|AAN65897.1|AE016217_9 conserved hypothetical protein [Pseudomonas putida KT2440]
Length = 368
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 117/224 (52%), Positives = 147/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVTLAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR QL + NIRV+E+S + +W RDTGPT V+N +V G+D
Sbjct: 61 TVAVSAGQYENARRQLDQPNIRVVEISNDDAWVRDTGPTFVINDHG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+ D ++A K+L ER R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WGFNAWGGFDGGLYAPWNRDEELAAKVLEMERCQRYQTEGFVLEGGSIHVDGEGTVITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL++ QIE L+ +L V ++WLP GL+ DG
Sbjct: 173 ECLLNRNRNPHLSREQIEAVLRDHLAVDTVVWLPDGLYNDETDG 216
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 89/175 (50%), Gaps = 19/175 (10%)
Query: 144 VARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNP-----HLTKG 195
V R L+ + + P + + HVD + E LL + + +P H
Sbjct: 192 VLRDHLAVDTVVWLPDGLYNDETDGHVDNFCCYVRPGEVLLAWTDDSNDPNYARCHAAMD 251
Query: 196 QIEN--ELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGT-------RLAASYVNFYIAN 246
++N + K ++ + +P LF + ++AG+ RLA SYVNF I N
Sbjct: 252 VLKNTRDAKGREFIVHKMPIPGPLFATAEECAGVDQVAGSQERDPSVRLAGSYVNFLIVN 311
Query: 247 GGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
GGII P F D D EA +L++ FP +EVV I RE++LGGGNIHC+TQQQPA
Sbjct: 312 GGIIAPSFDDPA-DAEARAILARIFPDHEVVMIP-GRELLLGGGNIHCLTQQQPA 364
>gi|399010302|ref|ZP_10712677.1| agmatine deiminase [Pseudomonas sp. GM17]
gi|398107348|gb|EJL97349.1| agmatine deiminase [Pseudomonas sp. GM17]
Length = 368
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 146/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MPAEW +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LHSTPRADGFYMPAEWATQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIR++EMS + +W RDTGPT V+N +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRLVEMSSDDAWVRDTGPTFVINDQG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYSPWNRDSQVGGKILEIERSPRYRTEGFVLEGGSIHVDGEGTVITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPH+ + +IE L A L V K+IWLP GL+ DG
Sbjct: 173 ECLLNRNRNPHMNRAEIEAVLSANLAVDKVIWLPDGLYNDETDG 216
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D D +A +L FP++EVV + RE++LG
Sbjct: 294 RNPSVRLAGSYVNFLIVNGGIIAPSF-DDPLDAQAKEILQNLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|421525096|ref|ZP_15971717.1| agmatine deiminase [Pseudomonas putida LS46]
gi|402751559|gb|EJX12072.1| agmatine deiminase [Pseudomonas putida LS46]
Length = 368
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 117/224 (52%), Positives = 148/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVTLAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV ASA Q+ENAR QL + NIRV+E+S + +W RDTGPT V++ +V G+D
Sbjct: 61 TVAASAGQYENARRQLDQPNIRVVEISNDDAWVRDTGPTFVIDGHG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+ D ++A K+L ER R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WGFNAWGGFDGGLYAPWNRDEELAAKVLEMERCQRYQTEGFVLEGGSIHVDGEGTVITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL++ QIE L+ +L V ++WLP GL+ DG
Sbjct: 173 ECLLNRNRNPHLSREQIEAVLRDHLAVDTVVWLPDGLYNDETDG 216
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 89/175 (50%), Gaps = 19/175 (10%)
Query: 144 VARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNP-----HLTKG 195
V R L+ + + P + + HVD + E LL + + +P H
Sbjct: 192 VLRDHLAVDTVVWLPDGLYNDETDGHVDNFCCYVRPGEVLLAWTDDSNDPNYARCHAAMD 251
Query: 196 QIEN--ELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGT-------RLAASYVNFYIAN 246
++N + K ++ + +P LF + ++AG+ RLA SYVNF I N
Sbjct: 252 VLKNTRDAKGREFIVHKMPIPGPLFATAEECAGVDQVAGSQERDPSVRLAGSYVNFLIVN 311
Query: 247 GGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
GGII P F D D EA +L++ FP +EVV I RE++LGGGNIHC+TQQQPA
Sbjct: 312 GGIIAPSFDDPA-DAEARAILARIFPDHEVVMIP-GRELLLGGGNIHCLTQQQPA 364
>gi|425896978|ref|ZP_18873569.1| agmatine deiminase [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|397884210|gb|EJL00696.1| agmatine deiminase [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
Length = 368
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 146/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MPAEW +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LHSTPRADGFYMPAEWATQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIR++EMS + +W RDTGPT V+N +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRLVEMSSDDAWVRDTGPTFVINDQG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYAPWNRDSQVGGKILEIERSPRYRTEGFVLEGGSIHVDGEGTVITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPH+ + +IE L A L V K+IWLP GL+ DG
Sbjct: 173 ECLLNRNRNPHMNRAEIEAVLSANLAVDKVIWLPDGLYNDETDG 216
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D D +A +L FP++EVV + RE++LG
Sbjct: 294 RNPSVRLAGSYVNFLIVNGGIIAPSF-DDPLDAQAKEILQNLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|431800309|ref|YP_007227212.1| agmatine deiminase [Pseudomonas putida HB3267]
gi|430791074|gb|AGA71269.1| agmatine deiminase [Pseudomonas putida HB3267]
Length = 368
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/224 (52%), Positives = 146/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ +A AI++FEPV
Sbjct: 4 LNSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPAQAAHVTLAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR QL + NIRV+E+S + +W RDTGPT V+N +V G+D
Sbjct: 61 TVAVSAGQYENARRQLDQPNIRVVEISNDDAWVRDTGPTFVINDQG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+ D ++A K+L ER R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WGFNAWGGFDGGLYAPWNRDEELAAKVLEMERCQRYHTEGFVLEGGSIHVDGEGTVITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL + QIE L+ +L V ++WLP GL+ DG
Sbjct: 173 ECLLNRNRNPHLNREQIEAVLRDHLAVDTLVWLPDGLYNDETDG 216
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 144 VARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIENE 200
V R L+ + L P + + HVD + E LL + + +P+ + E
Sbjct: 192 VLRDHLAVDTLVWLPDGLYNDETDGHVDNFCCYVRPGEVLLAWTDDSNDPNYARCHAAME 251
Query: 201 L-------KAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGT-------RLAASYVNFYIAN 246
+ K ++ + +P LF + ++AG+ RLA SYVNF I N
Sbjct: 252 VLKNTRDAKGREFIVHKMPIPGPLFATAEECAGVDQVAGSQERDPSVRLAGSYVNFLIVN 311
Query: 247 GGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
GGII P F D D EA +L++ FP +EVV I RE++LGGGNIHC+TQQQPA
Sbjct: 312 GGIIAPSFDDPA-DAEARAILAKIFPDHEVVMIP-GRELLLGGGNIHCLTQQQPA 364
>gi|422417474|ref|ZP_16494429.1| agmatine deiminase [Listeria seeligeri FSL N1-067]
gi|313635435|gb|EFS01689.1| agmatine deiminase [Listeria seeligeri FSL N1-067]
Length = 364
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/217 (53%), Positives = 148/217 (68%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ + G+ MP E+E H+ C++ WP ER DNWR A AQ+ F VATAIS+FEPV
Sbjct: 4 IDSSSKKDGFRMPGEFEKHTGCYIIWP---ERPDNWRLGAKPAQKAFVDVATAISEFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV AS++Q+ NAR LP+ IRV+EM + +W RD+GPT VVN S V G+DW
Sbjct: 61 TVVASSSQYVNARYMLPDEIRVVEMDNDDAWVRDSGPTFVVNDSG--------DVRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHS-MVLEGGSIHVDGEGTCLTTEE 181
+FNSWGG+ DG Y W D QVA+KI ER R+ + VLEGGSIHVDGEGT +TTEE
Sbjct: 113 SFNSWGGLVDGLYFPWDKDDQVAQKICELERKDRYRLADFVLEGGSIHVDGEGTLVTTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL++ RNP L+K QIE LK YL + KIIWL RG++
Sbjct: 173 CLLSEGRNPQLSKKQIEMVLKEYLNLEKIIWLKRGIY 209
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G RLAASY+N+Y ANGG+I P FGD D A L Q +P +VVG+ +AREI+L
Sbjct: 292 PREEGDRLAASYINYYTANGGVIFPLFGDPN-DELAREKLQQLYPDRKVVGV-KAREILL 349
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQ P
Sbjct: 350 GGGNIHCITQQVP 362
>gi|397665632|ref|YP_006507169.1| Agmatine deiminase (Agmatine iminohydrolase) [Legionella
pneumophila subsp. pneumophila]
gi|395129043|emb|CCD07265.1| Agmatine deiminase (Agmatine iminohydrolase) [Legionella
pneumophila subsp. pneumophila]
Length = 346
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 132/355 (37%), Positives = 181/355 (50%), Gaps = 73/355 (20%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDAL-HAQRVFAKVATAISKFEP 61
MN P +G+ MPAEW PH +CWM WP + D W L A+ +A+VA AI++FEP
Sbjct: 1 MNTAPKQYGFYMPAEWYPHERCWMAWPCHH---DTWSKIGLDKAKMAYARVAKAIAQFEP 57
Query: 62 VTVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
VT+ + ++A + NI +I + +N SW RDTG T ++N ++AG+
Sbjct: 58 VTLLVNPGDEDSAENLCKGHNIEIISLPINDSWTRDTGATFLINNEK--------QLAGV 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DW N+WGG Y D SLD +A ++ F +V+EGGS HVDGEGT LT++
Sbjct: 110 DWIHNAWGG----NYADCSLDNLIASHLIKRTEAQYFHAPLVMEGGSFHVDGEGTILTSK 165
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWL---------------------PRGLFG 219
ECLLN NRNPHL++ +IE L YLG +IIWL P +
Sbjct: 166 ECLLNSNRNPHLSQQEIEQYLINYLGAERIIWLNMGLIGDETDGHVDEIATFIAPGKVLC 225
Query: 220 MIHDGEAKPR----------------------------------LAGTRLAASYVNFYIA 245
+I + P L G RL SY+NFY+A
Sbjct: 226 LITKDKEDPNYHRLQENFEILKSSKDARGRTFEVYTVEQPPPTYLNGERLTLSYINFYMA 285
Query: 246 NGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
N GI+ P FG + +D A ++ Q FP Y++ I+ A ++ GGG IHCITQQQP
Sbjct: 286 NQGIVMPAFGYESFDRLAYQLFVQIFPGYQITQID-ALDVFSGGGGIHCITQQQP 339
>gi|433776055|ref|YP_007306522.1| agmatine deiminase [Mesorhizobium australicum WSM2073]
gi|433668070|gb|AGB47146.1| agmatine deiminase [Mesorhizobium australicum WSM2073]
Length = 368
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 110/215 (51%), Positives = 145/215 (67%), Gaps = 11/215 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ P E+EP S CW+ WP ER D WR A AQR+FA VA AI++ EP+
Sbjct: 5 LSTTPRQDGFRAPGEFEPKSGCWLIWP---ERPDTWRLGAKPAQRLFANVAAAIAQSEPM 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV AS+ QW+NAR++LP ++RV+EMS N SW RD+GP VVN +V G+DW
Sbjct: 62 TVAASSRQWQNARARLPSHVRVVEMSTNDSWLRDSGPNFVVNDRG--------EVRGVDW 113
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG D G Y W LD VA+K+L ER+ R+ ++ EGG + DG+GT +TTE+C
Sbjct: 114 IFNAYGGFDGGLYSPWDLDDLVAQKVLDIERMDRYRAPLIAEGGGLQCDGQGTLITTEQC 173
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
LLN+NRN HL K ++E +L YLGV KIIWLPRG
Sbjct: 174 LLNRNRNAHLGKAKVEQQLGDYLGVDKIIWLPRGF 208
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R G R+AASY+N+Y N ++ P+FG DG+A + L+ FP +++VGIE +REI+LG
Sbjct: 293 RPTGNRIAASYINYYPGNSVVVVPEFG-CNLDGKAKQQLATLFPDHKLVGIENSREILLG 351
Query: 289 GGNIHCIT 296
GGN+ CIT
Sbjct: 352 GGNVACIT 359
>gi|116054019|ref|YP_788461.1| agmatine deiminase [Pseudomonas aeruginosa UCBPP-PA14]
gi|421151296|ref|ZP_15610915.1| agmatine deiminase [Pseudomonas aeruginosa ATCC 14886]
gi|421172010|ref|ZP_15629791.1| agmatine deiminase [Pseudomonas aeruginosa CI27]
gi|122261841|sp|Q02UC5.1|AGUA_PSEAB RecName: Full=Agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|115589240|gb|ABJ15255.1| agmatine deiminase [Pseudomonas aeruginosa UCBPP-PA14]
gi|404527586|gb|EKA37734.1| agmatine deiminase [Pseudomonas aeruginosa ATCC 14886]
gi|404538449|gb|EKA47988.1| agmatine deiminase [Pseudomonas aeruginosa CI27]
Length = 368
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 150/221 (67%), Gaps = 13/221 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEWEPH Q WM WP ER DNWR+ AQ FA VA AI++FEPVTVC
Sbjct: 7 TPRADGFRMPAEWEPHEQTWMVWP---ERPDNWRNGGKPAQAAFAAVAKAIARFEPVTVC 63
Query: 66 ASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
ASA Q+ENAR++L + NIRV+E+S + +W RDTGPT V++ V G+DW F
Sbjct: 64 ASAGQYENARARLDDGNIRVVEISSDDAWVRDTGPTFVIDDKG--------DVRGVDWGF 115
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECL 183
N+WGG + G Y W D QVARKIL ER R+ VLEGGSIHVDGEGT +TTEECL
Sbjct: 116 NAWGGFEGGLYFPWQRDDQVARKILEIERRARYRTDDFVLEGGSIHVDGEGTLITTEECL 175
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LN NRNPHL++ +IE L+ YL V IIWLP GL+ DG
Sbjct: 176 LNHNRNPHLSQVEIERTLRDYLAVDSIIWLPNGLYNDETDG 216
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++PR RLA SYVNF I NGGI+ P F D K D EA +L + FP++EVV + REI
Sbjct: 291 SQPRDPSIRLAGSYVNFLIVNGGIVAPSFDDPK-DAEARAILQRVFPEHEVVMVP-GREI 348
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHCITQQQPA
Sbjct: 349 LLGGGNIHCITQQQPA 364
>gi|452823386|gb|EME30397.1| agmatine deiminase [Galdieria sulphuraria]
Length = 367
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 108/211 (51%), Positives = 144/211 (68%), Gaps = 9/211 (4%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQ 70
G+ PAEWE H Q W+GWP ERLDNWRD+A+ AQ F +V I++FEPVTV SA
Sbjct: 8 GFRFPAEWERHKQTWIGWP---ERLDNWRDNAVPAQNTFEEVIRTIAEFEPVTVIVSANS 64
Query: 71 WENARSQLPEN--IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWG 128
W R + +N +RVIEMS + W RDTGP +V+++ SS ++ G+D+ FN+WG
Sbjct: 65 WTQVRERFKDNHNVRVIEMSTDDCWLRDTGPIFIVSRTGESSC----QLCGVDFVFNAWG 120
Query: 129 GVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNR 188
GV +GCY +W D +A KIL ER R+ ++VLEGG++ DG+GT L TEEC+L+ NR
Sbjct: 121 GVKEGCYVNWDKDAMIAWKILELERFKRYVSNLVLEGGAVSTDGQGTLLATEECVLHSNR 180
Query: 189 NPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
NP+ ++ IE ELK YLGV KIIWLP G++G
Sbjct: 181 NPNWSRDMIEKELKLYLGVEKIIWLPLGVYG 211
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G+I +A R RL ASYVNFY AN +I P FG+ WD EA ++ P+ ++
Sbjct: 285 GVISTSQAVDRKVNERLVASYVNFYFANNVLIMPSFGE-PWDSEARKIFQSIVPERQIRQ 343
Query: 279 IERAREIVLGGGNIHCITQQQP 300
+ AREI+LGGG IHC+TQQQP
Sbjct: 344 VA-AREIILGGGGIHCVTQQQP 364
>gi|334341176|ref|YP_004546156.1| agmatine deiminase [Desulfotomaculum ruminis DSM 2154]
gi|334092530|gb|AEG60870.1| agmatine deiminase [Desulfotomaculum ruminis DSM 2154]
Length = 339
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 139/353 (39%), Positives = 183/353 (51%), Gaps = 73/353 (20%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP + MPAEW H+ +M WPV E+ W D A+ FA+VA I+ FEPVT+
Sbjct: 2 TPGDFHFKMPAEWSRHACTFMEWPVHEEQ---WPDCYHEAKGAFAEVARTIASFEPVTML 58
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A+ Q A +R++ + + SW RD GPT VVN +VAG++W FN
Sbjct: 59 ANPEQAREAARLCGPTVRIVSIEHDDSWMRDNGPTFVVNLKG--------EVAGVNWIFN 110
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WG +R W+ D QVA ++L LP F +VLEGGS+HVDGEGT LTTEECLLN
Sbjct: 111 AWGEK----FRPWAKDDQVAPELLKQLGLPCFNAPIVLEGGSVHVDGEGTLLTTEECLLN 166
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG--------------------- 224
KNRNPHL+K +IE L+ +LG+ K+IWL +GL+G DG
Sbjct: 167 KNRNPHLSKEEIEEVLRKFLGIEKLIWLKKGLYGDETDGHVDNVACFAEPGVILVHTCSN 226
Query: 225 --------------------EAKPR--------------LAGTRLAASYVNFYIANGGII 250
+AK R G RL SY+NFY NGGI+
Sbjct: 227 RNEPNYEILKENLAILEKSSDAKGRKLEIIKMELPPVQYFGGERLTLSYINFYFVNGGIV 286
Query: 251 TPQFGD--KKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
P FG ++ D +A++VL + +VV + IV GGGN+HCITQQ P
Sbjct: 287 LPVFGGECEETDRQALQVLQKTLCNRKVVTV-NGLPIVKGGGNVHCITQQMPG 338
>gi|452819836|gb|EME26887.1| agmatine deiminase [Galdieria sulphuraria]
Length = 376
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 139/217 (64%), Gaps = 6/217 (2%)
Query: 5 GTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTV 64
G L ++ PAEW HSQ W+GWP ER DNWR D AQ F K+ +SK+E +TV
Sbjct: 2 GVMKLEEFVYPAEWVQHSQSWIGWP---ERPDNWRKDGKPAQEAFVKLIETLSKYEKITV 58
Query: 65 CASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
AS + W+ R+ LP N+R++E+ N W RDTGP + K + G+D+ F
Sbjct: 59 AASISSWKQCRNLLPSNVRIVEIQTNDCWLRDTGPIFLTRKVPCEGSTN---ICGVDFAF 115
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL 184
N+WGG +GCY DW D V KIL ER+PR S+VLEGG++ DGEGT +TTEECLL
Sbjct: 116 NAWGGSLEGCYPDWEYDSLVTSKILEIERIPRVEASLVLEGGAVVTDGEGTIITTEECLL 175
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMI 221
N+NRNP +TK ++E +LK YL V K+IWLP G++G I
Sbjct: 176 NRNRNPGMTKKEVEAKLKEYLHVEKVIWLPFGVYGDI 212
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
A R G RL ASYVN YI NG +I P + D D A+ + + FP+ VV + AREI
Sbjct: 293 ALSRNTGQRLPASYVNAYIGNGVVILPSYDDPN-DKLALDLFQELFPERSVVQVP-AREI 350
Query: 286 VLGGGNIHCITQQQPAI 302
+LGGG IHC+ +QP++
Sbjct: 351 LLGGGGIHCVVLEQPSV 367
>gi|402701554|ref|ZP_10849533.1| agmatine deiminase [Pseudomonas fragi A22]
Length = 368
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/224 (52%), Positives = 148/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ +P G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LHSSPRADGFHMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHVAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENA + L NIRV+EMS + +W RD+GPT V+N S +V G++
Sbjct: 61 TVGVSAGQYENACAHLDVPNIRVVEMSSDDAWVRDSGPTFVINDSG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QV KIL ER R+ VLEGGSIHVDGEGT +TT
Sbjct: 113 WDFNAWGGFDGGLYSPWNRDRQVGSKILEIERSARYHTEGFVLEGGSIHVDGEGTLITTT 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECL+N+NRNPHL++ +IE+ L+++L V KIIWLP GLF DG
Sbjct: 173 ECLMNRNRNPHLSREEIEDVLRSHLAVDKIIWLPDGLFNDETDG 216
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 143 QVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQI-- 197
V R L+ +++ P + + HVD + E LL + +NP+ +
Sbjct: 191 DVLRSHLAVDKIIWLPDGLFNDETDGHVDNFCCYVAPGEVLLAWTDDEQNPNYARCHAAM 250
Query: 198 -----ENELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGT-------RLAASYVNFYIA 245
+ K V+ + +P ++ + + ++AG+ RLA SYVNF I
Sbjct: 251 DVLASSTDAKGRPFVVHKMPIPGPMYATQEECDGVDKVAGSQDRNPSERLAGSYVNFLIV 310
Query: 246 NGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
NGGII P F D D A +L FP++EVV + RE++LGGGNIHC+TQQQPA
Sbjct: 311 NGGIIAPSF-DDPMDAPAKVILQNLFPQHEVVMVP-GRELLLGGGNIHCLTQQQPA 364
>gi|398940924|ref|ZP_10669532.1| agmatine deiminase [Pseudomonas sp. GM41(2012)]
gi|398162168|gb|EJM50373.1| agmatine deiminase [Pseudomonas sp. GM41(2012)]
Length = 374
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/214 (50%), Positives = 143/214 (66%), Gaps = 10/214 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP L G+ +P E+E S CW+GWP ER D WR+ A AQ+V+ ++ TAIS+ EPV
Sbjct: 5 LDSTPKLDGFRLPGEFETKSGCWLGWP---ERTDVWRNGAKPAQKVWVQIVTAISQSEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCASAAQ+ AR QLP +RV+EM+ N +WFRD+GP VVN S +V G+D+
Sbjct: 62 TVCASAAQFATARRQLPPQVRVVEMTCNDTWFRDSGPCFVVNDDSG-------EVRGVDF 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG+D G Y W D Q+A KIL ER R+ ++ E G I DG+G+ LTTE+C
Sbjct: 115 EFNAYGGLDGGLYYPWDKDDQIASKILEIERFDRYRAPLIAELGGIQSDGQGSILTTEQC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN+NRN HL K ++ L YLG +IIWLPRG
Sbjct: 175 LLNRNRNQHLGKDEVTRRLTDYLGAEQIIWLPRG 208
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 212 WLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAF 271
W G+ R AGT++ ASY+N+Y N I+ P FGD+ D A L++ F
Sbjct: 277 WTAEEAEGLDQQDSTHTRQAGTKICASYINYYAGNTSIVVPLFGDRN-DQAAQATLAELF 335
Query: 272 PKYEVVGIERAREIVLGGGNIHCITQQQPA 301
P++++VGIE +REI+LGGGN+ CIT Q A
Sbjct: 336 PQHKIVGIENSREILLGGGNVACITMPQYA 365
>gi|261252005|ref|ZP_05944579.1| agmatine deiminase [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417952890|ref|ZP_12595940.1| agmatine deiminase [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|260938878|gb|EEX94866.1| agmatine deiminase [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342818132|gb|EGU53002.1| agmatine deiminase [Vibrio orientalis CIP 102891 = ATCC 33934]
Length = 363
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/216 (51%), Positives = 147/216 (68%), Gaps = 11/216 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MP E EPH++ WM WP ER DNWRD A AQ+VF+ VA ISK PV
Sbjct: 5 IDTTPKHDGFRMPGEHEPHNEIWMAWP---ERTDNWRDGAKPAQKVFSDVAKQISKTTPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ AS+AQ++NA S+LPE+IRV+E+S + SW RD G T VV+ + G +DW
Sbjct: 62 TMLASSAQYDNAVSRLPEDIRVLEVSTDDSWMRDIGATYVVDDNGERRG--------VDW 113
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG DG Y W+ D QVA+K+ T R R+ +VLEGGSIHVDGEGT TTEEC
Sbjct: 114 EFNAWGGFVDGLYSPWNRDNQVAQKMCETIRDSRYRAPIVLEGGSIHVDGEGTLYTTEEC 173
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
LL+++RNP L+K ++ L +L V K++WLPRGL+
Sbjct: 174 LLHESRNPDLSKQELTEVLCEHLNVEKVVWLPRGLY 209
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 224 GEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAR 283
E R AG RLAASY N+ I N I+ P DK++D + + +L + +P YEV GI AR
Sbjct: 287 AEGMEREAGERLAASYANYLITNKQIVLPLL-DKRYDDDVIEILEEIYPGYEVNGIP-AR 344
Query: 284 EIVLGGGNIHCITQQQPAI 302
EI+LGGGNIHCITQQ P I
Sbjct: 345 EILLGGGNIHCITQQVPRI 363
>gi|254282061|ref|ZP_04957029.1| agmatine deiminase [gamma proteobacterium NOR51-B]
gi|219678264|gb|EED34613.1| agmatine deiminase [gamma proteobacterium NOR51-B]
Length = 368
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 143/214 (66%), Gaps = 11/214 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MP E+EP S CW+GWP ER D WR+ +AQ V+ ++ AI++ EPV
Sbjct: 5 LESTPLQDGFRMPGEFEPKSGCWLGWP---ERPDVWRNGGKNAQHVWVEICAAIARSEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVC SAAQ+ NAR++LP +IRVIEMS N SWFRD+ +VN +V G DW
Sbjct: 62 TVCVSAAQYANARNRLPTDIRVIEMSTNDSWFRDSACAFLVNDKG--------EVRGTDW 113
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG++DG Y W D Q+A+KIL E L R+ S++ E G I DGEGT LTTE+C
Sbjct: 114 TFNAYGGLNDGLYFPWDKDDQIAQKILEIENLDRYRSSLIAEMGGIQCDGEGTLLTTEQC 173
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN NRN HL K +E +L+ Y+GV KI+WLPRG
Sbjct: 174 LLNPNRNGHLGKTAVEEQLREYMGVEKILWLPRG 207
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 212 WLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAF 271
W P G+ A R AGT++ ASY+N+YI N ++ P+F D D A +L F
Sbjct: 276 WTPEEAAGLDVGTGAHERTAGTKICASYINYYIGNTVVVVPEFDDPH-DEPAKAMLQVLF 334
Query: 272 PKYEVVGIERAREIVLGGGNIHCITQQQPA 301
P +EV+GI+ AREI+LGGGNI CITQ Q A
Sbjct: 335 PDHEVIGIKNAREILLGGGNIACITQPQYA 364
>gi|409418104|ref|ZP_11258114.1| agmatine deiminase [Pseudomonas sp. HYS]
Length = 368
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/224 (52%), Positives = 145/224 (64%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MPAEW P +Q WM WP ER DNWR Q +A AI++FEPV
Sbjct: 4 LTSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPVQAAHVTLAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ++NAR++L NIRV+E+S + +W RDTGPT V+N S +V G+D
Sbjct: 61 TVAVSAAQYDNARARLDLPNIRVVEISNDDAWVRDTGPTFVINDSG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG + G Y W+ D Q+A K+L ER R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WGFNAWGGFEGGLYSPWNRDEQLASKVLEMERCQRYHTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN NRNPHL + QIE L+ +L V IIWLP GL+ DG
Sbjct: 173 ECLLNHNRNPHLNREQIEAILRDHLAVDTIIWLPDGLYNDETDG 216
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++ R RLA SYVNF I NGGII P F D D EA +L++ FP +EVV I RE+
Sbjct: 291 SQERNPSVRLAGSYVNFLIVNGGIIAPSFDDPA-DAEARAILARVFPDHEVVMIP-GREM 348
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHC+TQQQPA
Sbjct: 349 LLGGGNIHCLTQQQPA 364
>gi|104781319|ref|YP_607817.1| peptidyl-arginine deiminase [Pseudomonas entomophila L48]
gi|95110306|emb|CAK15013.1| putative Porphyromonas-type peptidyl-arginine deiminase
[Pseudomonas entomophila L48]
Length = 369
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 146/214 (68%), Gaps = 10/214 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ +P E+EP + CW+GWP ER D WR+ AQ+V+ ++ +AI+ EPV
Sbjct: 5 LTTTPKADGFRLPGEFEPKAGCWLGWP---ERPDVWRNGGKPAQKVWVEIVSAIASSEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCASAAQ+ NAR+QLP ++RV+EM+ N +WFRD+GP VVN S +V G+D+
Sbjct: 62 TVCASAAQYSNARNQLPAHVRVVEMTCNDTWFRDSGPCFVVNDDSG-------EVRGVDF 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG+D G Y W D Q+ARKIL E+L R+ ++ E G I DG+G+ LTTE+C
Sbjct: 115 EFNAYGGLDGGLYYPWDKDDQIARKILEIEQLDRYRAPLIAELGGIQSDGQGSLLTTEQC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN+NRN HL K ++ L+ YLG ++IWLPRG
Sbjct: 175 LLNRNRNAHLGKDEVTRRLQDYLGAEQVIWLPRG 208
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R AGT++ ASY+N+Y N I+ P FGD+ D A L++ FP + ++GIE +REI+LG
Sbjct: 294 RQAGTQICASYINYYAGNSVIVVPLFGDRN-DSVAQATLAELFPGHRIIGIENSREILLG 352
Query: 289 GGNIHCITQQQPA 301
GGN+ CIT Q A
Sbjct: 353 GGNVACITMPQYA 365
>gi|429331154|ref|ZP_19211920.1| agmatine deiminase [Pseudomonas putida CSV86]
gi|428764127|gb|EKX86276.1| agmatine deiminase [Pseudomonas putida CSV86]
Length = 369
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 120/225 (53%), Positives = 145/225 (64%), Gaps = 14/225 (6%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MPAEW P +Q WM WP ER DNWR AQ VA AI++FEPV
Sbjct: 4 LTSTPRDDGFHMPAEWAPQTQVWMIWP---ERPDNWRLGGKPAQAAHTAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLPE--NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
TV SAAQ+ENA S+L + NIRV+E+S + +W RDTGPT V+N S +V G+
Sbjct: 61 TVGVSAAQYENAVSRLGDEPNIRVVELSNDDAWVRDTGPTFVINGSG--------EVRGV 112
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTT 179
DW FN+WGG + G Y W+ D QVA KI+ ER R+ VLEGGSIHVDGEGT +TT
Sbjct: 113 DWGFNAWGGFNGGLYAPWNRDEQVAGKIMGLERTARYVTEGFVLEGGSIHVDGEGTLITT 172
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
EECLLN NRNPHL + QIE L+ L V I+WLP GL+ DG
Sbjct: 173 EECLLNANRNPHLNREQIETILRDNLAVDTIVWLPDGLYNDETDG 217
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++ R +RLA SYVNF I NGGII P F D D EA +L++ FP++E+V + RE+
Sbjct: 292 SQERSPSSRLAGSYVNFLIVNGGIIAPSFDDPA-DAEARTILARLFPEHEIVMVP-GREL 349
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHC+TQQQPA
Sbjct: 350 LLGGGNIHCLTQQQPA 365
>gi|386018702|ref|YP_005936726.1| agmatine deiminase [Pseudomonas stutzeri DSM 4166]
gi|327478674|gb|AEA81984.1| agmatine deiminase [Pseudomonas stutzeri DSM 4166]
Length = 368
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/224 (55%), Positives = 151/224 (67%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP GY MPAEW PHSQ WM WP +R DNWRD+A AQ FA VA AI++FEPV
Sbjct: 4 LSSTPRQDGYFMPAEWAPHSQTWMVWP---QRPDNWRDNAAPAQTAFAAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TVCASA Q+ AR+ L + IRV+EMS + +W RDTGPT V++ + + G+D
Sbjct: 61 TVCASAEQYLAARAALDDPRIRVVEMSSDDAWVRDTGPTFVIDDNGG--------LRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y DW D +VARKIL E R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WTFNAWGGEDGGLYADWQRDDEVARKILEIEYCDRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNP L++ QIE L+ +L V IIWLP GLF DG
Sbjct: 173 ECLLNRNRNPQLSREQIEAVLREHLAVDSIIWLPHGLFNDETDG 216
>gi|452818705|gb|EME25929.1| agmatine deiminase [Galdieria sulphuraria]
Length = 372
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 112/208 (53%), Positives = 137/208 (65%), Gaps = 9/208 (4%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
PAEWE H Q W+GWP ERLDNWRD A AQ F +V +IS+FEPV V SA QW+
Sbjct: 13 FPAEWERHKQTWIGWP---ERLDNWRDGAGPAQNTFVRVIQSISEFEPVNVLVSAKQWKR 69
Query: 74 ARSQLPEN--IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
R+ N +RVIE+S + W RDTGP +++ + + KV G+D+ FN+WGGV
Sbjct: 70 VRACFRSNERVRVIELSTDDCWLRDTGPLMIMARQRDT----LCKVQGVDFAFNAWGGVT 125
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
DGCY W D VA KIL ERL R+ +VLEGG+I DGEGT +TTEECLLN NRNP
Sbjct: 126 DGCYSKWDQDSVVAWKILDLERLKRYSSGLVLEGGAISCDGEGTLVTTEECLLNPNRNPG 185
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGLFG 219
T+ IE EL YLG+ K+IWLP G+FG
Sbjct: 186 WTRTMIEEELNKYLGIDKVIWLPYGVFG 213
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G++ EA R G RL ASYVNFY NG +I P FG+ WD A V FP+ ++
Sbjct: 287 GLVFSDEAVVRRVGERLVASYVNFYFVNGAVIVPSFGE-PWDSNADEVFKHVFPRRQIRR 345
Query: 279 IERAREIVLGGGNIHCITQQQP 300
+ AREI+LGGG IHCITQQQP
Sbjct: 346 VA-AREIILGGGGIHCITQQQP 366
>gi|146280457|ref|YP_001170610.1| agmatine deiminase [Pseudomonas stutzeri A1501]
gi|166919514|sp|A4VFL7.1|AGUA_PSEU5 RecName: Full=Agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|145568662|gb|ABP77768.1| peptidyl-arginine deiminase-like protein [Pseudomonas stutzeri
A1501]
Length = 368
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 125/224 (55%), Positives = 150/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP GY MPAEW PHSQ WM WP +R DNWRD+A AQ FA VA AI++FEPV
Sbjct: 4 LTSTPRQDGYYMPAEWAPHSQTWMVWP---QRPDNWRDNAAPAQAAFAAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TVCASA Q+ AR+ L + IRV+EMS + +W RDTGPT V++ + + G+D
Sbjct: 61 TVCASAEQYLAARAALDDPRIRVVEMSSDDAWVRDTGPTFVIDDNGG--------LRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y DW D +VARKIL E R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WTFNAWGGKDGGLYADWQRDDEVARKILEIEYCDRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNP L++ QIE L+ +L V IIWLP GLF DG
Sbjct: 173 ECLLNRNRNPQLSREQIEAVLREHLAVDSIIWLPHGLFNDETDG 216
>gi|398924684|ref|ZP_10661369.1| agmatine deiminase [Pseudomonas sp. GM48]
gi|398173126|gb|EJM60971.1| agmatine deiminase [Pseudomonas sp. GM48]
Length = 368
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 149/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MPAEW P +Q WM WP ER DNWR AQ A VA AI++FEPV
Sbjct: 4 LNSTPRADGFYMPAEWAPQTQAWMIWP---ERPDNWRLGGKPAQAAHAAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RD+GPT V+N S +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRVVEMSSDDAWVRDSGPTFVINNSG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYSPWNRDSQVGGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPH+ + +IE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHMNREEIEAVLSANLAVDKIIWLPDGLFNDETDG 216
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D + DG A +L FP++EVV + RE++LG
Sbjct: 294 RNPTVRLAGSYVNFLIVNGGIIAPSFDDPQ-DGPAKEILQNLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|339492146|ref|YP_004712439.1| agmatine deiminase [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338799518|gb|AEJ03350.1| agmatine deiminase [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 368
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 125/224 (55%), Positives = 150/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP GY MPAEW PHSQ WM WP +R DNWRD+A AQ FA VA AI++FEPV
Sbjct: 4 LTSTPRQDGYYMPAEWAPHSQTWMVWP---QRPDNWRDNAAPAQAAFAAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TVCASA Q+ AR+ L + IRV+EMS + +W RDTGPT V++ + + G+D
Sbjct: 61 TVCASAEQYLAARAALDDPRIRVVEMSSDDAWVRDTGPTFVIDDNGG--------LRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y DW D +VARKIL E R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WTFNAWGGEDGGLYADWQRDDEVARKILEIEYCDRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNP L++ QIE L+ +L V IIWLP GLF DG
Sbjct: 173 ECLLNRNRNPQLSREQIEAVLREHLAVDSIIWLPHGLFNDETDG 216
>gi|357153463|ref|XP_003576459.1| PREDICTED: agmatine deiminase-like [Brachypodium distachyon]
Length = 395
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 147/219 (67%), Gaps = 12/219 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ GTPA G+ MPAEWEPH QCW+GWP + WRD A AQ+ FA V IS+FEPV
Sbjct: 29 LEGTPAALGFRMPAEWEPHDQCWIGWP---DAQGLWRDAAAPAQKAFANVVNRISRFEPV 85
Query: 63 TVCASAAQWENARSQL--PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
TVC SA Q+ + N+RV+EMS W RD GPT VV + + +AG+
Sbjct: 86 TVCCSAGQYARVADLMEHKSNVRVVEMSARVVWMRDLGPTFVVREGKTRLRRE---IAGV 142
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DW +N++GG ++ S D VARKIL ER+PRF S VLEGGSIHVDGEGTC+TTE
Sbjct: 143 DWQYNAYGGQEEYL----SEDNLVARKILELERVPRFKTSFVLEGGSIHVDGEGTCITTE 198
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
+CL + NRNPH++K +IE +LK YLGV K+IWLP+GL+G
Sbjct: 199 QCLCHGNRNPHMSKDEIEKQLKIYLGVSKVIWLPKGLYG 237
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/69 (73%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLA SYVNFYIANGGII P FGD+ WD EA +VL +AFP +EVV +E REIVLGGGNIH
Sbjct: 322 RLAGSYVNFYIANGGIIAPAFGDR-WDEEARKVLEKAFPNHEVVMVEGGREIVLGGGNIH 380
Query: 294 CITQQQPAI 302
C TQQQPA+
Sbjct: 381 CATQQQPAL 389
>gi|84386497|ref|ZP_00989524.1| hypothetical protein V12B01_17486 [Vibrio splendidus 12B01]
gi|84378602|gb|EAP95458.1| hypothetical protein V12B01_17486 [Vibrio splendidus 12B01]
Length = 363
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 113/216 (52%), Positives = 145/216 (67%), Gaps = 11/216 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MP E EPHS+ WM WP ER DNWR+ A AQ VFA VAT IS PV
Sbjct: 5 IDTTPKHDGFRMPGEHEPHSEIWMAWP---ERTDNWRNGAKPAQAVFADVATKISHTTPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ AS+ Q++NA S+LPE+IRV+E+S + SW RD G T VV+ S G +DW
Sbjct: 62 TMLASSDQYDNAVSRLPEDIRVLEISTDDSWMRDIGATYVVDDSGERRG--------VDW 113
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG DG Y W+ D QVA+K+ T R R+ +VLEGGSIHVDGEGT TTEEC
Sbjct: 114 EFNAWGGFVDGLYSPWNRDNQVAQKMCETIRDSRYRAPIVLEGGSIHVDGEGTLYTTEEC 173
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
LL+++RNP ++K ++ L +L V K+IWLPRGL+
Sbjct: 174 LLHESRNPDMSKEELTEVLCEHLNVEKVIWLPRGLY 209
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R AG RLAASY N+ I N I+ P D+++D + + +L +P YEV G+ AREI+LG
Sbjct: 292 REAGERLAASYANYLITNNQIVLPLL-DQRYDNDVIGILEGIYPGYEVNGVP-AREILLG 349
Query: 289 GGNIHCITQQQPAI 302
GGNIHCITQQ P +
Sbjct: 350 GGNIHCITQQVPRV 363
>gi|307608755|emb|CBW98137.1| hypothetical protein LPW_00041 [Legionella pneumophila 130b]
Length = 348
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 133/357 (37%), Positives = 183/357 (51%), Gaps = 73/357 (20%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDAL-HAQRVFAKVATAISKF 59
M MN P +G+ MPAEW PH +CWM WP +E W L A+ +A+VA AI++F
Sbjct: 1 MNMNTAPKQYGFYMPAEWYPHERCWMAWPCHHE---TWSKIGLDKAKMAYARVAKAIAQF 57
Query: 60 EPVTVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVA 118
EPVT+ + ++A++ NI +I + +N SW RDTG T ++N ++A
Sbjct: 58 EPVTLLVNPGDEDSAKNLCKGHNIEIISLPINDSWTRDTGATFLINNER--------QLA 109
Query: 119 GIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLT 178
G+DW N+WGG Y D SLD +A ++ F +V+EGGS HVDGEGT LT
Sbjct: 110 GVDWIHNAWGG----NYADCSLDNFIASHLIKYTEAQYFHAPLVMEGGSFHVDGEGTILT 165
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG-------------- 224
++ECLLN NRNPHL++ +IE L YLG +IIWL GL G DG
Sbjct: 166 SKECLLNSNRNPHLSQQEIEQYLINYLGAERIIWLNMGLIGDETDGHVDEIATFIAPGKV 225
Query: 225 ---------------------------EAKPRLAGTRLA----ASYVN----------FY 243
+A+ R A+Y+N FY
Sbjct: 226 LCLITKDKEDPNYDRLQENFEILKSSKDARGRTFEVHTVEQPPATYLNGERLTLSYINFY 285
Query: 244 IANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
+AN GI+ P FG + +D A ++ Q FP Y++ I+ A ++ GGG IHCITQQQP
Sbjct: 286 MANQGIVMPAFGYESFDRLAYQLFVQIFPGYQITQID-ALDVFSGGGGIHCITQQQP 341
>gi|160894945|ref|ZP_02075719.1| hypothetical protein CLOL250_02495 [Clostridium sp. L2-50]
gi|156863376|gb|EDO56807.1| agmatine deiminase [Clostridium sp. L2-50]
Length = 365
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/215 (51%), Positives = 140/215 (65%), Gaps = 12/215 (5%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N TP G+ MP E+E Q +M WP ER DNWR A AQ+ FA VA AIS+FEPVT
Sbjct: 7 NSTPKADGFRMPGEFEEQKQIFMIWP---ERTDNWRAGAKPAQKTFANVAAAISEFEPVT 63
Query: 64 VCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWN 123
+C SAAQ+E+A++ LP +R+IEMS N +W RD GP+ ++N ++ DW+
Sbjct: 64 MCVSAAQYEHAKAMLPAGVRIIEMSSNDAWCRDMGPSFLINDKG--------EIRACDWS 115
Query: 124 FNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG+ DG Y W D Q+A KI E++ + VLEGGS HVDGEGT +TTE C
Sbjct: 116 FNAWGGLVDGLYFPWDKDDQIASKICELEQIDSYRTDDFVLEGGSFHVDGEGTLITTEMC 175
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
LL+K RNPHLTK QIE +LK YL V IIW+ G+
Sbjct: 176 LLSKGRNPHLTKAQIEQKLKDYLNVDTIIWIKDGI 210
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
+ PR G ASY+NF I NGGII PQ+GD+ D A+R + FP+ +VVG+ R EI
Sbjct: 291 SAPRKTGDLAIASYLNFLIVNGGIILPQYGDEN-DALAIRQVQSMFPERKVVGV-RTEEI 348
Query: 286 VLGGGNIHCITQQQP 300
GGGNIHCITQQQP
Sbjct: 349 AYGGGNIHCITQQQP 363
>gi|407364584|ref|ZP_11111116.1| peptidyl-arginine deiminase [Pseudomonas mandelii JR-1]
Length = 374
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 143/214 (66%), Gaps = 10/214 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP L G+ +P E+E + CW+GWP ER D WR+ A AQ+V+ ++ TAI++ EPV
Sbjct: 5 LDSTPKLDGFRLPGEFETKAGCWLGWP---ERTDVWRNGAKPAQKVWVQIVTAIAQSEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCASAAQ+ AR QLP +RV+EM+ N +WFRD+GP VVN S +V G+D+
Sbjct: 62 TVCASAAQFATARRQLPPEVRVVEMTCNDTWFRDSGPCFVVNDDSG-------EVRGVDF 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG+D G Y W D Q+A KIL ER R+ ++ E G I DG+G+ LTTE+C
Sbjct: 115 EFNAYGGLDGGLYYPWDKDDQIASKILEIERFDRYRAPLIAEMGGIQSDGQGSILTTEQC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN+NRN HL K ++ L YLG +IIWLPRG
Sbjct: 175 LLNRNRNQHLGKEEVTRRLTDYLGAEQIIWLPRG 208
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 212 WLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAF 271
W G+ R AGT++ ASY+N+Y N I+ P FGD+ D A L++ F
Sbjct: 277 WTAEEAEGLDQQDSTHTRQAGTQICASYINYYAGNSSIVVPLFGDRN-DQAAQATLAELF 335
Query: 272 PKYEVVGIERAREIVLGGGNIHCITQQQPAIPTN 305
P++ +VGIE +REI+LGGGN+ CIT Q A P N
Sbjct: 336 PQHTIVGIENSREILLGGGNVACITMPQYAAPAN 369
>gi|52840261|ref|YP_094060.1| peptidylarginine deiminase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378775966|ref|YP_005184392.1| peptidylarginine deiminase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|73622165|sp|Q5ZZK4.1|AGUA_LEGPH RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|52627372|gb|AAU26113.1| peptidylarginine deiminase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364506769|gb|AEW50293.1| peptidylarginine deiminase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 348
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 183/357 (51%), Gaps = 73/357 (20%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDAL-HAQRVFAKVATAISKF 59
M MN P +G+ MPAEW PH +CWM WP +E W L A+ +A+VA AI++F
Sbjct: 1 MNMNTAPKQYGFYMPAEWYPHERCWMAWPCHHE---TWSKIGLDKAKMAYARVAKAIAQF 57
Query: 60 EPVTVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVA 118
EPVT+ + ++A + NI +I + +N SW RDTG T ++N ++A
Sbjct: 58 EPVTLLVNPGDEDSAENLCKGHNIEIISLPINDSWTRDTGATFLINNER--------QLA 109
Query: 119 GIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLT 178
G+DW N+WGG Y D SLD +A ++ F +V+EGGS HVDGEGT LT
Sbjct: 110 GVDWIHNAWGG----NYADCSLDNLIASHLIKYTEAQYFHAPLVMEGGSFHVDGEGTILT 165
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG-------------- 224
++ECLLN NRNPHL++ +IE L YLG +IIWL GL G DG
Sbjct: 166 SKECLLNSNRNPHLSQQEIEQYLINYLGAERIIWLNMGLIGDETDGHVDEIATFIAPGKV 225
Query: 225 -----------------EAKPRLAGTRLA--------------ASYVN----------FY 243
E L ++ A A+Y+N FY
Sbjct: 226 LCLITKDKEDPNYHRLQENFEILKSSKDARGRTFEVYTVEQPPATYLNGERLTLSYINFY 285
Query: 244 IANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
+AN GI+ P FG + +D A ++ Q FP Y++ I+ A ++ GGG IHCITQQQP
Sbjct: 286 MANQGIVMPAFGYESFDRLAYQLFVQIFPGYQITQID-ALDVFSGGGGIHCITQQQP 341
>gi|261251837|ref|ZP_05944411.1| agmatine deiminase [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417953854|ref|ZP_12596896.1| hypothetical protein VIOR3934_21026 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|260938710|gb|EEX94698.1| agmatine deiminase [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342816499|gb|EGU51396.1| hypothetical protein VIOR3934_21026 [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length = 360
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 194/375 (51%), Gaps = 89/375 (23%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M+++ TPA G+ PAE++P SQ W+ WP ER DNWRD AL AQ+ FA++A AI+
Sbjct: 1 MQLSTTPAQDGFYFPAEFQPVSQVWLAWP---ERRDNWRDSALPAQQTFARIANAIADVT 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
V V S+ Q+++AR L IR++E+ N +W RD GPT+VVNK+ G I
Sbjct: 58 KVCVAVSSKQFDHARQVLHCEIRLVEIPYNDAWMRDIGPTVVVNKAGERRG--------I 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG +G Y +W D VA + + + VLEGG+IH DGEGT TTE
Sbjct: 110 SWTFNAWGGAYNGLYENWQQDDLVASSVCDIIGIDHYRAPFVLEGGAIHTDGEGTLYTTE 169
Query: 181 ECLLN-------------KNRNPHL----------------TKGQIEN------------ 199
ECLL+ KN +L T G ++N
Sbjct: 170 ECLLSPGRNPQLSKAEIEKNLREYLSIEKVIWLPKGLFNDETDGHVDNLMHVIAPGKVVL 229
Query: 200 -------------------ELKAYLGV----MKIIWLPRGLFGMIH--DGEAK------- 227
LKA+ +++I LP L G +H +GEA
Sbjct: 230 SWTDDPSDPQYALSREAEKVLKAHKDAKGRSIEVIRLP--LPGPLHYSEGEASGIDISKG 287
Query: 228 -PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIV 286
R AG RL+ASY NF I N + P D+K D EA+ +L++A P+Y+++GI +RE++
Sbjct: 288 MNRHAGERLSASYANFLIVNEHVFLPLL-DEKTDAEAMAILNEAMPEYQIIGIP-SREVL 345
Query: 287 LGGGNIHCITQQQPA 301
LGGGNIHCITQQ PA
Sbjct: 346 LGGGNIHCITQQIPA 360
>gi|410664460|ref|YP_006916831.1| agmatine deiminase [Simiduia agarivorans SA1 = DSM 21679]
gi|409026817|gb|AFU99101.1| agmatine deiminase [Simiduia agarivorans SA1 = DSM 21679]
Length = 362
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/225 (53%), Positives = 140/225 (62%), Gaps = 14/225 (6%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M TP G+ MPAEW P Q WM WP ER DNWR A AQ F V AI++++P+
Sbjct: 1 MMSTPRADGFAMPAEWAPQKQAWMIWP---ERTDNWRLGAKPAQAAFMAVMRAIAQYQPL 57
Query: 63 TVCASAAQWENARSQLP--ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
TV S AQ+ENA QL NIRV+E+S N +W RDTGPT V N A +V +
Sbjct: 58 TVGVSHAQFENASEQLAGIANIRVVEISNNDAWVRDTGPTFVRNS--------AGEVRAV 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTT 179
DW FN+WGG++ G Y W D VARKI E R+ VLEGGSIHVDGEGT +TT
Sbjct: 110 DWRFNAWGGLNGGLYFPWDKDDAVARKIAQIENTARYRTDEFVLEGGSIHVDGEGTLITT 169
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
EECLLN NRNPHLT+ QIE L YL V K+IWLP GL+ DG
Sbjct: 170 EECLLNANRNPHLTREQIEAYLADYLSVEKVIWLPDGLYNDETDG 214
>gi|388547021|ref|ZP_10150291.1| agmatine deiminase [Pseudomonas sp. M47T1]
gi|388274942|gb|EIK94534.1| agmatine deiminase [Pseudomonas sp. M47T1]
Length = 368
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/224 (50%), Positives = 144/224 (64%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
TP G+ MPAEW P +Q WM WP ER DNWR Q +A AI++FEPV
Sbjct: 4 FTSTPRADGFHMPAEWAPQTQVWMVWP---ERPDNWRLGGKPVQAAHVVLAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQL-PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q++NAR++L NIRV+E+S + +W RDTGPT V+N +V G+D
Sbjct: 61 TVAVSAGQYDNARARLDAPNIRVVEISNDDAWVRDTGPTFVINDQG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+ D Q+A K++ ER R+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WGFNAWGGFDGGLYSPWNRDEQLASKVMEIERCGRYHTEGFVLEGGSIHVDGEGTLVTTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL++ +IE L+ +L V I+WLP GLF DG
Sbjct: 173 ECLLNRNRNPHLSREEIEAVLRDHLAVDTIVWLPDGLFNDETDG 216
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 87/175 (49%), Gaps = 19/175 (10%)
Query: 144 VARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQI--- 197
V R L+ + + P + + HVD + E LL + + +P+ + +
Sbjct: 192 VLRDHLAVDTIVWLPDGLFNDETDGHVDNFCCYVRPGEVLLAWTDDSNDPNYARCRAAMN 251
Query: 198 ----ENELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGT-------RLAASYVNFYIAN 246
+ + V+ + +P L+ + + +AGT RLA SYVNF I N
Sbjct: 252 VLANTKDARGRTFVVHKMPIPGPLYATAEECDGVDPVAGTQERNPSVRLAGSYVNFLIVN 311
Query: 247 GGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
GGII P F D K D EA +L FP +EV+ I RE++LGGGNIHC+TQQQPA
Sbjct: 312 GGIIAPSFDDPK-DAEAKVILQGIFPDHEVIMIP-GRELLLGGGNIHCLTQQQPA 364
>gi|398966778|ref|ZP_10681650.1| agmatine deiminase [Pseudomonas sp. GM30]
gi|398145450|gb|EJM34233.1| agmatine deiminase [Pseudomonas sp. GM30]
Length = 373
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 141/214 (65%), Gaps = 10/214 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ +P E+E S CW+GWP ER D WR+ A AQ+V+ ++ TAIS EPV
Sbjct: 5 LDSTPKRDGFRLPGEFEAKSGCWLGWP---ERTDVWRNGAKPAQKVWVQIVTAISHSEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCASAAQ+ AR QLP +RV+EM+ N +WFRD+GP VVN S +V G+D+
Sbjct: 62 TVCASAAQFATARRQLPPQVRVVEMTCNDTWFRDSGPCFVVNDQSG-------EVRGVDF 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG+D G Y W D Q+A KIL ER R+ ++ E G I DG+G+ LTTE+C
Sbjct: 115 EFNAYGGLDGGLYYPWDKDDQIASKILEIERFDRYRAPLIAELGGIQSDGQGSILTTEQC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN+NRN HL K ++ L YLG ++IWLPRG
Sbjct: 175 LLNRNRNQHLGKAEVTRRLTDYLGAEQVIWLPRG 208
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 212 WLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAF 271
W G+ R AGT++ ASY+N+Y N I+ P FGD+ D A+ L++ F
Sbjct: 277 WTAEEAEGLDQQDSTHTRQAGTQICASYINYYAGNSSIVVPLFGDRN-DQVALATLAELF 335
Query: 272 PKYEVVGIERAREIVLGGGNIHCITQQQPAIPTN 305
P++++VGIE +REI+LGGGN+ CIT Q A +N
Sbjct: 336 PQHKIVGIENSREILLGGGNVACITMPQYAGTSN 369
>gi|148358144|ref|YP_001249351.1| peptidylarginine deiminase [Legionella pneumophila str. Corby]
gi|296105502|ref|YP_003617202.1| peptidylarginine deiminase [Legionella pneumophila 2300/99 Alcoy]
gi|148279917|gb|ABQ54005.1| peptidylarginine deiminase [Legionella pneumophila str. Corby]
gi|295647403|gb|ADG23250.1| peptidylarginine deiminase [Legionella pneumophila 2300/99 Alcoy]
Length = 348
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 183/357 (51%), Gaps = 73/357 (20%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDAL-HAQRVFAKVATAISKF 59
M MN P +G+ MPAEW PH +CWM WP + D W L A+ +A+VA AI++F
Sbjct: 1 MNMNTAPKQYGFYMPAEWYPHERCWMAWPCHH---DTWSKIGLDKAKMAYARVAKAIAQF 57
Query: 60 EPVTVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVA 118
EPVT+ + ++A + NI +I + +N SW RDTG T ++N ++A
Sbjct: 58 EPVTLLVNPGDEDSAENLCKGHNIEIISLPINDSWTRDTGATFLINNER--------QLA 109
Query: 119 GIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLT 178
G+DW N+WGG Y D SLD +A ++ F +V+EGGS HVDGEGT LT
Sbjct: 110 GVDWIHNAWGG----NYADCSLDNLLASHLIKYTEAQYFHAPLVMEGGSFHVDGEGTILT 165
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG-------------- 224
++ECLLN NRNPHL++ +IE L YLG +IIWL GL G DG
Sbjct: 166 SKECLLNSNRNPHLSQQEIEQYLINYLGAERIIWLNMGLIGDETDGHVDEIATFIAPGKV 225
Query: 225 -----------------EAKPRLAGTRLA--------------ASYVN----------FY 243
E L ++ A A+Y+N FY
Sbjct: 226 LCLITKDKEDPNYHRLQENFEILKSSKDARGRTFEVYTVEQPPATYLNGERLTLSYINFY 285
Query: 244 IANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
+AN GI+ P FG + +D A ++ Q FP Y++ I+ A ++ GGG IHCITQQQP
Sbjct: 286 MANQGIVMPAFGYESFDRLAYQLFVQIFPGYQITQID-ALDVFSGGGGIHCITQQQP 341
>gi|157961030|ref|YP_001501064.1| agmatine deiminase [Shewanella pealeana ATCC 700345]
gi|157846030|gb|ABV86529.1| Agmatine deiminase [Shewanella pealeana ATCC 700345]
Length = 368
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 143/214 (66%), Gaps = 11/214 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TP G+ MP E+EP CW+GWP ER D WR+ A AQ+V+ ++ TAI+ E V
Sbjct: 5 LNSTPREDGFRMPGEFEPKKGCWLGWP---ERSDVWRNGAKPAQKVWVEICTAIASSELV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVC S AQ+ENAR+ LPE +RV+EMS N +WFRD+ +VN + +V G DW
Sbjct: 62 TVCVSQAQYENARNMLPETVRVVEMSTNDAWFRDSACAFLVNDTG--------EVRGTDW 113
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG++ G Y W D ++A+KIL E L R+ +++ E G I DG+GT LTTE+C
Sbjct: 114 EFNAYGGLNGGLYFPWDKDEKIAQKILEIENLDRYRSTLIAEMGGIQCDGQGTLLTTEQC 173
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN NRN HL K ++E +L+ Y+GV KIIWLPRG
Sbjct: 174 LLNVNRNAHLGKAEVEQQLRDYMGVEKIIWLPRG 207
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R+AGT++ ASY+N+YI N I+ P + D D A +L + FP ++V+GI+ AREI+LG
Sbjct: 293 RVAGTKICASYINYYIGNSVIMVPAY-DDPMDETAQAILRKLFPNHKVIGIQNAREILLG 351
Query: 289 GGNIHCITQQQPA 301
GGN+ CITQ Q A
Sbjct: 352 GGNVACITQPQYA 364
>gi|54292969|ref|YP_125384.1| hypothetical protein lpl0005 [Legionella pneumophila str. Lens]
gi|73622166|sp|Q5X0L4.1|AGUA_LEGPL RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|53752801|emb|CAH14235.1| hypothetical protein lpl0005 [Legionella pneumophila str. Lens]
Length = 347
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/355 (37%), Positives = 183/355 (51%), Gaps = 73/355 (20%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDAL-HAQRVFAKVATAISKFEP 61
MN P +G+ MPAEW PH +CWM WP +E W L A+ +A+VA AI++FEP
Sbjct: 1 MNTAPKQYGFYMPAEWYPHERCWMAWPCHHE---TWSKIGLDKAKMAYARVAKAIAQFEP 57
Query: 62 VTVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
VT+ + ++A++ NI +I + +N SW RDTG T ++N ++AG+
Sbjct: 58 VTLLVNPGDEDSAKNLCKGHNIEIISLPINDSWTRDTGATFLINNER--------QLAGV 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DW N+WGG Y D SLD +A I+ F +V+EGGS HVDGEGT LT++
Sbjct: 110 DWIHNAWGG----NYADCSLDNFIASHIIKYTEAQYFHAPLVMEGGSFHVDGEGTILTSK 165
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG---------------- 224
ECLLN NRNPHL++ +IE L YLG +IIWL GL G DG
Sbjct: 166 ECLLNSNRNPHLSQQEIEQYLINYLGAERIIWLNMGLIGDETDGHVDEIATFIAPGKVLC 225
Query: 225 ---------------EAKPRLAGTRLA--------------ASYVN----------FYIA 245
E L ++ A A+Y+N FY+A
Sbjct: 226 LITKDKEDPNYHRLQENFEILKSSKDARGRTFEVYTVEQPPATYLNGERLTLSYINFYMA 285
Query: 246 NGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
N GI+ P FG + +D A ++ Q FP Y++ I+ A ++ GGG IHCITQQQP
Sbjct: 286 NQGIVMPAFGYESFDRLAYQLFVQIFPGYQITQID-ALDVFSGGGGIHCITQQQP 339
>gi|367468037|ref|ZP_09467941.1| Agmatine deiminase [Patulibacter sp. I11]
gi|365816886|gb|EHN11880.1| Agmatine deiminase [Patulibacter sp. I11]
Length = 377
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/222 (50%), Positives = 139/222 (62%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TPA G+ MPAEWEPHS CWM WP ER DNWR A AQ +A VA AI +PV
Sbjct: 5 IGSTPAADGFRMPAEWEPHSGCWMVWP---ERADNWRWGAKPAQEAYAAVAHAIQPSDPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ SA Q+++ RS L IRV+EMS + +W RD GPT VV+ G +DW
Sbjct: 62 TMAVSAEQFDHCRSVLRPEIRVVEMSADDAWMRDMGPTFVVDDRGHRRG--------VDW 113
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
+FN+WGG+D G Y W D ARK+L ER R+ +VLEGGSIHVDGEGT + TE+C
Sbjct: 114 HFNAWGGLDGGLYFPWDADEHAARKVLEIERADRYRAPIVLEGGSIHVDGEGTVMATEQC 173
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNP L + QIE L Y+G K++WL G+F DG
Sbjct: 174 LLNHNRNPELGREQIERILCDYVGAEKVLWLREGVFNDETDG 215
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR AG RLAASYVNFY+ ++ P D+++D A +L+ FP+ EVVG+ AREI+L
Sbjct: 292 PRRAGDRLAASYVNFYLGTSRVVFPLL-DERYDDVAAEILAGCFPEREVVGVP-AREILL 349
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQ PA
Sbjct: 350 GGGNIHCITQQVPA 363
>gi|423098070|ref|ZP_17085866.1| agmatine deiminase [Pseudomonas fluorescens Q2-87]
gi|397884605|gb|EJL01088.1| agmatine deiminase [Pseudomonas fluorescens Q2-87]
Length = 368
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/224 (55%), Positives = 150/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MPAEW +Q WM WP ER DNWR AQ A VA AI++FEPV
Sbjct: 4 LHSTPRADGFHMPAEWAAQTQVWMIWP---ERPDNWRLGGKPAQAAHAAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ+ENAR++L NIR++EMS + +W RDTGPT V+N + +V G+D
Sbjct: 61 TVAVSAAQYENARARLDVPNIRLVEMSSDDAWVRDTGPTFVINNNG--------EVRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QVA KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYAPWNRDSQVAGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL++ IE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLSREAIEAVLSAQLAVDKIIWLPDGLFNDETDG 216
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++ R RLA SYVNF I NGGII P F D D A+ +L FP++EVV + RE+
Sbjct: 291 SQERNPSVRLAGSYVNFLIVNGGIIAPSF-DDPLDAPAMAILQGLFPQHEVVMVP-GREL 348
Query: 286 VLGGGNIHCITQQQPAIPTN 305
+LGGGNIHC+TQQQPA N
Sbjct: 349 LLGGGNIHCLTQQQPAPRAN 368
>gi|307111389|gb|EFN59623.1| hypothetical protein CHLNCDRAFT_133066 [Chlorella variabilis]
Length = 375
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/209 (52%), Positives = 139/209 (66%), Gaps = 13/209 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQ 70
GY MP EWEPH WMGWP +R DNWRD+A+H QR F VATAIS+FEPVTVCA+ Q
Sbjct: 22 GYRMPGEWEPHKGTWMGWP---QRPDNWRDNAVHVQREFVAVATAISQFEPVTVCANEEQ 78
Query: 71 WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
AR+ LPE ++V+ + + SWFRDTGPT +V + G ++ VAG+DW FN+WGG+
Sbjct: 79 VSAARAALPEQVQVMCVPQDDSWFRDTGPTFIVKEEGGYGGERS--VAGVDWQFNAWGGL 136
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
+ G Y W D QVA IL E + RF +V+EGGSIHVDGEGT LTT E +L++
Sbjct: 137 EGGLYTSWERDQQVAGTILGMEGVRRFACPIVMEGGSIHVDGEGTLLTTGEAVLSRE--- 193
Query: 191 HLTKGQIENELKAYLGVMKIIWLPRGLFG 219
IE L+ LG+ K+IWLP GL+G
Sbjct: 194 -----DIEGWLRRMLGIQKVIWLPLGLYG 217
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 61/78 (78%), Gaps = 3/78 (3%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDK--KWDGEAVRVLSQAFPKYEVVGIERAR 283
+KPR+AG R+AASY N+YI NGG++ P FG + D +A +VL++ +P+ VV ++ +R
Sbjct: 298 SKPRVAGDRMAASYANYYICNGGVVMPAFGGEAAAADEQARQVLAEVYPERRVVAVQ-SR 356
Query: 284 EIVLGGGNIHCITQQQPA 301
EI+LGGGNIHCITQQQPA
Sbjct: 357 EILLGGGNIHCITQQQPA 374
>gi|299822840|ref|ZP_07054726.1| agmatine deiminase [Listeria grayi DSM 20601]
gi|299816369|gb|EFI83607.1| agmatine deiminase [Listeria grayi DSM 20601]
Length = 365
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/217 (52%), Positives = 141/217 (64%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++G P G+ MP E+E H C++ WP ER DNWR A AQ+ F VATAI++FE V
Sbjct: 4 IDGFPKAEGFRMPGEFEAHKGCYLIWP---ERTDNWRLGAKPAQQAFTNVATAIAEFEKV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV S Q++NAR QLP+ IRVIEM+ + +W RD GPT V N +A +V GIDW
Sbjct: 61 TVLVSNRQYKNARYQLPDEIRVIEMASDDAWVRDCGPTFVKN--------EAGEVRGIDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FNSWGG+ DG Y W D VA+K+ E R+ VLEGGSIHVDGEGT +TTEE
Sbjct: 113 TFNSWGGLVDGLYFPWDNDNMVAQKVCEIEACDRYELPEFVLEGGSIHVDGEGTLITTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL++ RNP +K QIE L YL + KIIWL RG++
Sbjct: 173 CLLSEGRNPQFSKAQIEKILSEYLNIQKIIWLKRGIY 209
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G RLAASY+N+Y ANGGI+ P FGD D +A L++ +P +VVG+ RAREI+L
Sbjct: 292 PREEGDRLAASYINYYTANGGIVFPLFGDPN-DEKARTALTELYPDRKVVGV-RAREILL 349
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQ P
Sbjct: 350 GGGNIHCITQQVP 362
>gi|426409810|ref|YP_007029909.1| peptidyl-arginine deiminase [Pseudomonas sp. UW4]
gi|426268027|gb|AFY20104.1| peptidyl-arginine deiminase [Pseudomonas sp. UW4]
Length = 369
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 141/214 (65%), Gaps = 10/214 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ +P E+E S CW+GWP ER D WR+ A AQ+V+ ++ TAIS EPV
Sbjct: 5 LDTTPKQDGFRLPGEFEAKSGCWLGWP---ERTDVWRNGAKPAQKVWVQIVTAISMSEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCASAAQ+ AR QLP +RV+EM+ N +WFRD+GP VVN S +V G+D+
Sbjct: 62 TVCASAAQFATARRQLPPQVRVVEMTCNDTWFRDSGPCFVVNDQSG-------EVRGVDF 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG+D G Y W D Q+A KIL ER R+ ++ E G I DG+G+ LTTE+C
Sbjct: 115 EFNAYGGLDGGLYYPWDKDDQIASKILEIERFDRYRAPLIAELGGIQSDGQGSILTTEQC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN+NRN HL K ++ L YLG ++IWLPRG
Sbjct: 175 LLNRNRNQHLGKDEVTRRLTDYLGAEQVIWLPRG 208
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 212 WLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAF 271
W G+ R AGT++ ASY+N+Y N I+ P FGD+ D A+ L++ F
Sbjct: 277 WTAEEAEGLDQQDSTHTRQAGTKICASYINYYAGNSAIVVPLFGDRN-DKVALATLAELF 335
Query: 272 PKYEVVGIERAREIVLGGGNIHCITQQQPA 301
PK+ +VGIE +REI+LGGGN+ CIT Q A
Sbjct: 336 PKHSIVGIENSREILLGGGNVACITMPQYA 365
>gi|398853302|ref|ZP_10609913.1| agmatine deiminase [Pseudomonas sp. GM80]
gi|398240407|gb|EJN26088.1| agmatine deiminase [Pseudomonas sp. GM80]
Length = 374
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 141/214 (65%), Gaps = 10/214 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ +P E+E S CW+GWP ER D WR+ A AQ+V+ ++ TAIS EPV
Sbjct: 5 LDSTPKHDGFRLPGEFESKSGCWLGWP---ERTDVWRNGAKPAQKVWVQIVTAISHSEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCASAAQ+ AR QLP +RV+EM+ N +WFRD+GP VVN S +V G+D+
Sbjct: 62 TVCASAAQFATARRQLPPQVRVVEMTCNDTWFRDSGPCFVVNDQSG-------EVRGVDF 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG+D G Y W D Q+A KIL ER R+ ++ E G I DG+G+ LTTE+C
Sbjct: 115 EFNAYGGLDGGLYYPWDKDDQIASKILEIERFDRYRAPLIAELGGIQSDGQGSILTTEQC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN+NRN HL K ++ L YLG ++IWLPRG
Sbjct: 175 LLNRNRNQHLGKDEVTRRLTDYLGAEQVIWLPRG 208
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 212 WLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAF 271
W G+ R AGT++ ASY+N+Y N I+ P FGD++ D A+ L++ F
Sbjct: 277 WTAEEAEGLDQQDSTHTRQAGTKICASYINYYAGNSSIVVPLFGDRQ-DRVALATLAELF 335
Query: 272 PKYEVVGIERAREIVLGGGNIHCITQQQPA 301
P+ ++VGIE +REI+LGGGN+ CIT Q A
Sbjct: 336 PQQKIVGIENSREILLGGGNVACITMPQYA 365
>gi|398883865|ref|ZP_10638813.1| agmatine deiminase [Pseudomonas sp. GM60]
gi|398195907|gb|EJM82932.1| agmatine deiminase [Pseudomonas sp. GM60]
Length = 369
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 143/214 (66%), Gaps = 10/214 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ +P E+E + CW+GWP ER D WR+ A AQ+V+ ++ TAIS+ EPV
Sbjct: 5 LDTTPKQDGFRLPGEFETKAGCWLGWP---ERTDVWRNGAKPAQKVWVQIVTAISQSEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCASAAQ+ AR QLP +RV+EM+ N +WFRD+GP VVN +S +V G+D+
Sbjct: 62 TVCASAAQFATARRQLPPQVRVVEMTCNDTWFRDSGPCFVVNDASG-------EVRGVDF 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG+D G Y W D Q+A KIL ER R+ ++ E G I DG+G+ LTTE+C
Sbjct: 115 EFNAYGGLDGGLYYPWDKDDQIASKILEIERFDRYRAPLIAELGGIQSDGQGSILTTEQC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN+NRN HL K ++ L YLG ++IWLPRG
Sbjct: 175 LLNRNRNQHLGKEEVTRRLTDYLGAEQVIWLPRG 208
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 212 WLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAF 271
W G+ R AGTR+ ASY+N+Y N I+ P FGD+ D A+ L++ F
Sbjct: 277 WTAEEAEGLDQQDSTHTRQAGTRICASYINYYAGNTSIVVPLFGDRN-DQAALATLAELF 335
Query: 272 PKYEVVGIERAREIVLGGGNIHCITQQQPA 301
P++++VGIE +REI+LGGGN+ CIT Q A
Sbjct: 336 PQHKIVGIENSREILLGGGNVACITMPQYA 365
>gi|319784452|ref|YP_004143928.1| agmatine deiminase [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317170340|gb|ADV13878.1| agmatine deiminase [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 368
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 107/215 (49%), Positives = 140/215 (65%), Gaps = 11/215 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ P G+ P E+EP S CWM WP ER D WR A AQ++FA VA AI++ EPV
Sbjct: 5 LSTRPKQDGFRAPGEFEPKSGCWMIWP---ERPDTWRLGAKPAQKLFADVAAAIAQSEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV ASA QW+NAR++LP ++RV+EMS N SW RD+GP VVN V G+DW
Sbjct: 62 TVAASARQWQNARARLPGHVRVVEMSTNDSWLRDSGPNFVVNDQG--------DVRGVDW 113
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG D G Y W LD A+K+L E + R+ ++ EGG + DG+GT +TTE+C
Sbjct: 114 IFNAYGGFDGGLYSPWDLDDLAAQKVLEIENMDRYRAPLIAEGGGLQCDGQGTLITTEQC 173
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
LLN+NRN HL K ++E +L YLGV +IWLPRG
Sbjct: 174 LLNRNRNAHLGKAEVERQLGDYLGVDTVIWLPRGF 208
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R AG R+AASY+N+Y N ++ PQFG D +A R L++ FP + +VGIE +REI+LG
Sbjct: 293 RPAGNRIAASYINYYPGNSVVVVPQFG-CDLDVKAKRTLAELFPDHRIVGIENSREILLG 351
Query: 289 GGNIHCIT 296
GGN+ CIT
Sbjct: 352 GGNVACIT 359
>gi|398876734|ref|ZP_10631887.1| agmatine deiminase [Pseudomonas sp. GM67]
gi|398203882|gb|EJM90695.1| agmatine deiminase [Pseudomonas sp. GM67]
Length = 369
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 143/214 (66%), Gaps = 10/214 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ +P E+E + CW+GWP ER D WR+ A AQ+V+ ++ TAIS+ EPV
Sbjct: 5 LDTTPKQDGFRLPGEFETKAGCWLGWP---ERTDVWRNGAKPAQKVWVQIVTAISQSEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCASAAQ+ AR QLP +RV+EM+ N +WFRD+GP VVN +S +V G+D+
Sbjct: 62 TVCASAAQFATARRQLPPQVRVVEMTCNDTWFRDSGPCFVVNDASG-------EVRGVDF 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG+D G Y W D Q+A KIL ER R+ ++ E G I DG+G+ LTTE+C
Sbjct: 115 EFNAYGGLDGGLYYPWDKDDQIASKILEIERFDRYRAPLIAELGGIQSDGQGSILTTEQC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN+NRN HL K ++ L YLG ++IWLPRG
Sbjct: 175 LLNRNRNQHLGKEEVTRRLTDYLGAEQVIWLPRG 208
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 212 WLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAF 271
W G+ R AGT++ ASY+N+Y N I+ P FGD+ D A+ L++ F
Sbjct: 277 WTAEEAEGLDQQDSTHTRQAGTKICASYINYYAGNTSIVVPLFGDRN-DQVALATLAELF 335
Query: 272 PKYEVVGIERAREIVLGGGNIHCITQQQPA 301
P++++VGIE +REI+LGGGN+ CIT Q A
Sbjct: 336 PQHKIVGIENSREILLGGGNVACITMPQYA 365
>gi|398890351|ref|ZP_10643988.1| agmatine deiminase [Pseudomonas sp. GM55]
gi|398188315|gb|EJM75623.1| agmatine deiminase [Pseudomonas sp. GM55]
Length = 374
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 141/214 (65%), Gaps = 10/214 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ +P E+E S CW+GWP ER D WR+ A AQ+V+ ++ TAIS EPV
Sbjct: 5 LDTTPKQDGFRLPGEFEAKSGCWLGWP---ERTDVWRNGAKPAQKVWVQIVTAISMSEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCASAAQ+ AR QLP +RV+EM+ N +WFRD+GP VVN S +V G+D+
Sbjct: 62 TVCASAAQFATARRQLPPQVRVVEMTCNDTWFRDSGPCFVVNDQSG-------EVRGVDF 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG+D G Y W D Q+A KIL ER R+ ++ E G I DG+G+ LTTE+C
Sbjct: 115 EFNAYGGLDGGLYYPWDKDDQIASKILEIERFDRYRAPLIAELGGIQSDGQGSILTTEQC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN+NRN HL K ++ L YLG ++IWLPRG
Sbjct: 175 LLNRNRNQHLGKDEVTRRLTDYLGAEQVIWLPRG 208
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Query: 212 WLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAF 271
W G+ R AGT++ ASY+N+Y N I+ P FGD+ D A+ L++ F
Sbjct: 277 WTAEEAEGLDRQDSTHTRQAGTKICASYINYYAGNRSIVVPLFGDRN-DKVALATLAELF 335
Query: 272 PKYEVVGIERAREIVLGGGNIHCITQQQPAIPTNAAK 308
P++ +VGIE +REI+LGGGN+ CIT Q A T++ K
Sbjct: 336 PQHSIVGIENSREILLGGGNVACITMPQYAATTSSKK 372
>gi|398954917|ref|ZP_10676188.1| agmatine deiminase [Pseudomonas sp. GM33]
gi|398151865|gb|EJM40401.1| agmatine deiminase [Pseudomonas sp. GM33]
Length = 374
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 141/214 (65%), Gaps = 10/214 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ +P E+E S CW+GWP ER D WR+ A AQ+V+ ++ TAIS EPV
Sbjct: 5 LDTTPKQDGFRLPGEFEAKSGCWLGWP---ERTDVWRNGAKPAQKVWVQIVTAISMSEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCASAAQ+ AR QLP +RV+EM+ N +WFRD+GP VVN S +V G+D+
Sbjct: 62 TVCASAAQFATARRQLPPQVRVVEMTCNDTWFRDSGPCFVVNDQSG-------EVRGVDF 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG+D G Y W D Q+A KIL ER R+ ++ E G I DG+G+ LTTE+C
Sbjct: 115 EFNAYGGLDGGLYYPWDKDDQIASKILEIERFDRYRAPLIAELGGIQSDGQGSILTTEQC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN+NRN HL K ++ L YLG ++IWLPRG
Sbjct: 175 LLNRNRNQHLGKDEVTRRLTDYLGAEQVIWLPRG 208
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 212 WLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAF 271
W G+ R AGT++ ASY+N+Y N I+ P FGD+ D A+ L++ F
Sbjct: 277 WTAEEAEGLDQQDSTHTRQAGTKICASYINYYAGNSAIVVPLFGDRN-DKVALATLAELF 335
Query: 272 PKYEVVGIERAREIVLGGGNIHCITQQQPA 301
PK+ +VGIE +REI+LGGGN+ CIT Q A
Sbjct: 336 PKHSIVGIENSREILLGGGNVACITMPQYA 365
>gi|307546512|ref|YP_003898991.1| agmatine deiminase [Halomonas elongata DSM 2581]
gi|307218536|emb|CBV43806.1| agmatine deiminase [Halomonas elongata DSM 2581]
Length = 370
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 111/224 (49%), Positives = 147/224 (65%), Gaps = 11/224 (4%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M + TPA G+ MPAE+EPH CWM WP +R DNWR A AQ+ F +VATAI++ E
Sbjct: 4 MTSSATPAALGFSMPAEFEPHDACWMLWP---QRPDNWRYGAKPAQQAFVEVATAIAESE 60
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
V V + Q+ENAR+QLP+N+RV+E+S N +W RD GPT + + ++A +
Sbjct: 61 TVFVGVNDEQYENARNQLPDNVRVVELSSNDAWMRDVGPTFLTHPDG--------RLALV 112
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DW FN+WGG++ G Y W D ++ KI + RF S+VLEGG+IHVDGEGT +TTE
Sbjct: 113 DWEFNAWGGLEGGLYFPWDKDRRIRTKIAEMLGVTRFEASVVLEGGAIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN NRNP+L++ +E L+ LGV IIWLPRG + DG
Sbjct: 173 ECLLNANRNPNLSRDDMEQVLRDTLGVETIIWLPRGCYLDETDG 216
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 81/175 (46%), Gaps = 19/175 (10%)
Query: 143 QVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELK 202
QV R L E + P L+ HVD + + L+ +P + I E
Sbjct: 191 QVLRDTLGVETIIWLPRGCYLDETDGHVDNLCCFIAPGQVALSWTDDPADPQHAISREAL 250
Query: 203 AYLGV--------MKIIWLPRGLFGMIHDGEAK---------PRLAGTRLAASYVNFYIA 245
A L +++ LP+ I EA PR G R+A SYVNFYI
Sbjct: 251 AILEQARDAKGRPLEVHKLPQPGPLTIDADEASGIDRLSHSHPRRPGDRMAGSYVNFYIG 310
Query: 246 NGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
N ++ P D D EA ++ + FP V+G+ AREI+LGGGNIHCITQQQP
Sbjct: 311 NSVVVMPLL-DPARDDEARAIIEKLFPTRRVIGVP-AREILLGGGNIHCITQQQP 363
>gi|398922524|ref|ZP_10660316.1| agmatine deiminase [Pseudomonas sp. GM49]
gi|398162607|gb|EJM50795.1| agmatine deiminase [Pseudomonas sp. GM49]
Length = 369
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 141/214 (65%), Gaps = 10/214 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ +P E+E S CW+GWP ER D WR+ A AQ+V+ ++ TAIS EPV
Sbjct: 5 LDTTPKQDGFRLPGEFEAKSGCWLGWP---ERTDVWRNGAKPAQKVWVQIVTAISMSEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCASAAQ+ AR QLP +RV+EM+ N +WFRD+GP VVN S +V G+D+
Sbjct: 62 TVCASAAQFATARRQLPPQVRVVEMTCNDTWFRDSGPCFVVNDRSG-------EVRGVDF 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG+D G Y W D Q+A KIL ER R+ ++ E G I DG+G+ LTTE+C
Sbjct: 115 EFNAYGGLDGGLYYPWDKDDQIASKILEIERFDRYRAPLIAELGGIQSDGQGSILTTEQC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN+NRN HL K ++ L YLG ++IWLPRG
Sbjct: 175 LLNRNRNQHLGKDEVTRRLTDYLGAEQVIWLPRG 208
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 212 WLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAF 271
W G+ R AGT++ ASY+N+Y N I+ P FGD+ D A L++ F
Sbjct: 277 WTAEEAEGLDQQDSTHTRQAGTKICASYINYYAGNRTIVVPLFGDRN-DKVAQATLAELF 335
Query: 272 PKYEVVGIERAREIVLGGGNIHCITQQQPA 301
P++ +VGIE +REI+LGGGN+ CIT Q A
Sbjct: 336 PEHNIVGIENSREILLGGGNVACITMPQYA 365
>gi|398924047|ref|ZP_10661019.1| agmatine deiminase [Pseudomonas sp. GM48]
gi|398174004|gb|EJM61814.1| agmatine deiminase [Pseudomonas sp. GM48]
Length = 369
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 141/214 (65%), Gaps = 10/214 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ +P E+E S CW+GWP ER D WR+ A AQ+V+ ++ TAIS EPV
Sbjct: 5 LDTTPKQDGFRLPGEFEAKSGCWLGWP---ERTDVWRNGAKPAQKVWVQIVTAISMSEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCASAAQ+ AR QLP +RV+EM+ N +WFRD+GP VVN S +V G+D+
Sbjct: 62 TVCASAAQFATARRQLPPQVRVVEMTCNDTWFRDSGPCFVVNDRSG-------EVRGVDF 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG+D G Y W D Q+A KIL ER R+ ++ E G I DG+G+ LTTE+C
Sbjct: 115 EFNAYGGLDGGLYYPWDKDDQIASKILEIERFDRYRAPLIAELGGIQSDGQGSILTTEQC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN+NRN HL K ++ L YLG ++IWLPRG
Sbjct: 175 LLNRNRNQHLGKDEVTRRLTDYLGAEQVIWLPRG 208
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 212 WLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAF 271
W G+ R AGT++ ASY+N+Y N I+ P FGD+ D A L++ F
Sbjct: 277 WTAEEAEGLDRQDSTHTRQAGTKICASYINYYAGNKTIVVPLFGDRN-DKVAQATLAELF 335
Query: 272 PKYEVVGIERAREIVLGGGNIHCITQQQPA 301
P++ +VGIE +REI+LGGGN+ CIT Q A
Sbjct: 336 PEHNIVGIENSREILLGGGNVACITMPQYA 365
>gi|398978561|ref|ZP_10687884.1| agmatine deiminase [Pseudomonas sp. GM25]
gi|398136961|gb|EJM26035.1| agmatine deiminase [Pseudomonas sp. GM25]
Length = 371
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 141/214 (65%), Gaps = 10/214 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ +P E+E S CW+GWP ER D WR+ A AQ+V+ ++ TAIS EPV
Sbjct: 5 LDSTPKQDGFRLPGEFEAKSGCWLGWP---ERTDVWRNGAKPAQKVWVQIVTAISHSEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCASA+Q+ AR QLP +RV+EM+ N +WFRD+GP VVN S +V G+D+
Sbjct: 62 TVCASASQFATARRQLPPQVRVVEMTCNDTWFRDSGPCFVVNDQSG-------EVRGVDF 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG+D G Y W D Q+A KIL ER R+ ++ E G I DG+G+ LTTE+C
Sbjct: 115 EFNAYGGLDGGLYYPWDKDDQIASKILEIERFDRYRAPLIAELGGIQSDGQGSILTTEQC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN+NRN HL K ++ L YLG ++IWLPRG
Sbjct: 175 LLNRNRNQHLGKDEVTRRLTDYLGAEQVIWLPRG 208
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 212 WLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAF 271
W G+ R AGT++ ASY+N+Y N I+ P FGD+ D A+ L++ F
Sbjct: 277 WTAEEAEGLDQQDSTHTRQAGTKICASYINYYAGNSSIVVPLFGDRN-DQVALATLAELF 335
Query: 272 PKYEVVGIERAREIVLGGGNIHCITQQQPA 301
P++++VGIE +REI+LGGGN+ CIT Q A
Sbjct: 336 PQHKIVGIENSREILLGGGNVACITMPQYA 365
>gi|54295988|ref|YP_122357.1| hypothetical protein lpp0005 [Legionella pneumophila str. Paris]
gi|73622164|sp|Q5X986.1|AGUA_LEGPA RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|53749773|emb|CAH11153.1| hypothetical protein lpp0005 [Legionella pneumophila str. Paris]
Length = 346
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 182/355 (51%), Gaps = 73/355 (20%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDAL-HAQRVFAKVATAISKFEP 61
MN P +G+ MPAEW PH +CWM WP +E W L A+ +A+VA AI++FEP
Sbjct: 1 MNTAPKQYGFYMPAEWYPHERCWMAWPCHHE---TWSKIGLDKAKMAYARVAKAIAQFEP 57
Query: 62 VTVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
VT+ + ++A + NI +I + +N SW RDTG T ++N ++AG+
Sbjct: 58 VTLLVNPGDEDSATNLCKGHNIEIISLPINDSWTRDTGATFLINNEK--------QLAGV 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DW N+WGG Y D SLD +A ++ F +V+EGGS HVDGEGT LT++
Sbjct: 110 DWIHNAWGG----NYADCSLDNLIASHLIKCTEAQYFHAPLVMEGGSFHVDGEGTILTSK 165
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG---------------- 224
ECLLN NRNPHL++ +IE L YLG +IIWL GL G DG
Sbjct: 166 ECLLNSNRNPHLSQQEIEQYLINYLGAERIIWLNMGLIGDETDGHIDEIATFIAPGKVLC 225
Query: 225 ---------------EAKPRLAGTRLA--------------ASYVN----------FYIA 245
E L ++ A A+Y+N FY+A
Sbjct: 226 LITKDKEDPNYHRLQENFEILKSSKDARGRTFEVYTVEQPPATYLNGERLTLSYINFYMA 285
Query: 246 NGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
N GI+ P FG + +D A ++ Q FP Y++ I+ A ++ GGG IHCITQQQP
Sbjct: 286 NQGIVMPAFGYESFDRLAYQLFVQIFPGYQITQID-ALDVFSGGGGIHCITQQQP 339
>gi|397662561|ref|YP_006504099.1| Agmatine deiminase (Agmatine iminohydrolase) [Legionella
pneumophila subsp. pneumophila]
gi|395125972|emb|CCD04147.1| Agmatine deiminase (Agmatine iminohydrolase) [Legionella
pneumophila subsp. pneumophila]
Length = 346
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 182/355 (51%), Gaps = 73/355 (20%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDAL-HAQRVFAKVATAISKFEP 61
MN P +G+ MPAEW PH +CWM WP +E W L A+ +A+VA AI++FEP
Sbjct: 1 MNTAPKKYGFYMPAEWYPHERCWMAWPCHHE---TWSKIGLDKAKMAYARVAKAIAQFEP 57
Query: 62 VTVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
VT+ + ++A + NI +I + +N SW RDTG T ++N ++AG+
Sbjct: 58 VTLLVNPGDEDSAENLCKGHNIEIISLPINDSWTRDTGATFLINNER--------QLAGV 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DW N+WGG Y D SLD +A ++ F +V+EGGS HVDGEGT LT++
Sbjct: 110 DWIHNAWGG----NYADCSLDNLIASHLIKYTEAQYFHAPLVMEGGSFHVDGEGTILTSK 165
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG---------------- 224
ECLLN NRNPHL++ +IE L YLG +IIWL GL G DG
Sbjct: 166 ECLLNSNRNPHLSQQEIEQYLINYLGAERIIWLNMGLIGDETDGHVDEIATFIAPGKVLC 225
Query: 225 ---------------EAKPRLAGTRLA--------------ASYVN----------FYIA 245
E L ++ A A+Y+N FY+A
Sbjct: 226 LITKDKEDPNYHRLQENFEILKSSKDARGRTFEVYTVEQPPATYLNGERLTLSYINFYMA 285
Query: 246 NGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
N GI+ P FG + +D A ++ Q FP Y++ I+ A ++ GGG IHCITQQQP
Sbjct: 286 NQGIVMPAFGYESFDRLAYQLFVQIFPGYQITQID-ALDVFSGGGGIHCITQQQP 339
>gi|397688821|ref|YP_006526140.1| agmatine deiminase [Pseudomonas stutzeri DSM 10701]
gi|395810377|gb|AFN79782.1| agmatine deiminase [Pseudomonas stutzeri DSM 10701]
Length = 365
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 121/224 (54%), Positives = 150/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP GY MPAEW PHSQ WM WP +R DNWR A AQ FA VA AI++FEPV
Sbjct: 4 LSSTPRPDGYFMPAEWAPHSQTWMVWP---QRPDNWRQQATPAQAAFAAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TVCA+A Q+ AR+ L + IRV+EMS + +W RDTGPT V++ + G+D
Sbjct: 61 TVCATAEQYHAARAALDDPRIRVVEMSTDDAWVRDTGPTFVIDGQGG--------LRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG+D G Y DW D +VA KIL ER R+ VLEGG+IHVDGEGT +TTE
Sbjct: 113 WTFNAWGGLDGGLYADWQRDDEVACKILEIERCERYRTEGFVLEGGAIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNP L++ QIEN L +L + K+IWLP GL+ DG
Sbjct: 173 ECLLNRNRNPQLSREQIENVLAEHLAIDKVIWLPHGLYNDETDG 216
>gi|398991001|ref|ZP_10694163.1| agmatine deiminase [Pseudomonas sp. GM24]
gi|399011480|ref|ZP_10713811.1| agmatine deiminase [Pseudomonas sp. GM16]
gi|398117628|gb|EJM07374.1| agmatine deiminase [Pseudomonas sp. GM16]
gi|398141889|gb|EJM30796.1| agmatine deiminase [Pseudomonas sp. GM24]
Length = 368
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 148/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MPAEW P +Q WM WP ER DNWR AQ A VA AI++FEPV
Sbjct: 4 LKSTPRADGFHMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHAAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RD+GPT V+N S +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRVVEMSSDDAWVRDSGPTFVINNSG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYSPWNRDSQVGGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL + +IE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLGREEIEAVLSANLSVDKIIWLPDGLFNDETDG 216
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D D A +L + FP++EVV + RE++LG
Sbjct: 294 RNPSVRLAGSYVNFLIVNGGIIAPSF-DDPMDAPAREILQKLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|77458381|ref|YP_347886.1| peptidyl-arginine deiminase [Pseudomonas fluorescens Pf0-1]
gi|77382384|gb|ABA73897.1| agmatine deiminase [Pseudomonas fluorescens Pf0-1]
Length = 371
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 104/214 (48%), Positives = 142/214 (66%), Gaps = 10/214 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ +P E+E + CW+GWP ER D WR+ A AQ+V+ ++ TAIS+ EPV
Sbjct: 5 LDTTPKQDGFRLPGEFEAKAGCWLGWP---ERTDVWRNGAKPAQKVWVQIVTAISQSEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCASA+Q+ AR QLP +RV+EM+ N +WFRD+GP VVN S +V G+D+
Sbjct: 62 TVCASASQFATARRQLPPQVRVVEMTCNDTWFRDSGPCFVVNDQSG-------EVRGVDF 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG+D G Y W D Q+A KIL ER R+ ++ E G I DG+G+ LTTE+C
Sbjct: 115 EFNAYGGLDGGLYYPWDKDDQIASKILEIERFDRYRAPLIAELGGIQSDGQGSILTTEQC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN+NRN HL K ++ L YLG ++IWLPRG
Sbjct: 175 LLNRNRNQHLGKDEVTRRLTDYLGAEQVIWLPRG 208
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 212 WLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAF 271
W G+ R AGT++ ASY+N+Y N I+ P FGD+ D A+ L++ F
Sbjct: 277 WTAEEAEGLDQQDSTHTRQAGTKICASYINYYAGNSSIVVPLFGDRN-DQVALATLAELF 335
Query: 272 PKYEVVGIERAREIVLGGGNIHCITQQQPA 301
P++++VGIE +REI+LGGGN+ CIT Q A
Sbjct: 336 PQHKIVGIENSREILLGGGNVACITMPQYA 365
>gi|398868041|ref|ZP_10623467.1| agmatine deiminase [Pseudomonas sp. GM78]
gi|398234611|gb|EJN20474.1| agmatine deiminase [Pseudomonas sp. GM78]
Length = 374
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 141/214 (65%), Gaps = 10/214 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP L G+ +P E+E S CW+GWP ER D WR+ A AQ+V+ ++ TAIS+ EPV
Sbjct: 5 LDSTPKLDGFRLPGEFETKSGCWLGWP---ERTDVWRNGAKPAQKVWVQIVTAISQSEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCASA Q+ AR QLP +RV+EM+ N +WFRD+GP VVN S +V G+D+
Sbjct: 62 TVCASATQFATARRQLPPQVRVVEMTCNDTWFRDSGPCFVVNDQSG-------EVRGVDF 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG+D G Y W D Q+A KIL E R+ ++ E G I DG+G+ LTTE+C
Sbjct: 115 EFNAYGGLDGGLYYPWDKDDQIASKILEIEGFDRYRAPLIAELGGIQSDGQGSILTTEQC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN+NRN HL K ++ L YLG ++IWLPRG
Sbjct: 175 LLNRNRNQHLGKDEVTRRLTDYLGAEQVIWLPRG 208
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G+ R AGT++ ASY+N+Y N I+ P FGD+ D A+ L++ FP++++VG
Sbjct: 284 GLDQQDSTHTRQAGTKICASYINYYAGNTSIVVPLFGDRN-DQVALATLAELFPRHKIVG 342
Query: 279 IERAREIVLGGGNIHCITQQQPA 301
IE +REI+LGGGN+ CIT Q A
Sbjct: 343 IENSREILLGGGNVACITMPQYA 365
>gi|375131223|ref|YP_004993323.1| agmatine deiminase (Agmatine iminohydrolase) [Vibrio furnissii NCTC
11218]
gi|315180397|gb|ADT87311.1| hypothetical agmatine deiminase (Agmatine iminohydrolase) [Vibrio
furnissii NCTC 11218]
Length = 362
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 113/224 (50%), Positives = 137/224 (61%), Gaps = 11/224 (4%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
ME+ GTP +G+ PAE+ P Q WM WP R DNWRD+ AQR FA VA AIS+
Sbjct: 1 MELTGTPKQNGFYFPAEFAPQEQVWMAWPFR---PDNWRDNGEPAQRAFADVAMAISRKA 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
VTV +A E AR+ LPE I V+EMS N +W RD GPT+VVN G I
Sbjct: 58 KVTVAVTADYLEAARALLPEPISVVEMSYNDAWMRDIGPTMVVNADGERRG--------I 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG +G Y W D QVA +I + + + VLEGG+IH DGEGT TTE
Sbjct: 110 SWQFNAWGGEYNGLYAHWREDDQVAGQICNQLNVDHYQAPFVLEGGAIHTDGEGTLYTTE 169
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLL+ RNPHL++ IE +L YLG+ K+IWLPRGLF DG
Sbjct: 170 ECLLSPGRNPHLSREAIEAQLAQYLGIRKVIWLPRGLFNDETDG 213
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R AG RL SY NF + N I P D D +A+ VL A P YE++G+ REI+LG
Sbjct: 290 RAAGERLGGSYANFLMCNQSIFLPLL-DDTMDNQAIAVLQTALPDYEIIGVA-TREILLG 347
Query: 289 GGNIHCITQQQPA 301
GGNIHCITQQ PA
Sbjct: 348 GGNIHCITQQIPA 360
>gi|359781787|ref|ZP_09285010.1| agmatine deiminase [Pseudomonas psychrotolerans L19]
gi|359370157|gb|EHK70725.1| agmatine deiminase [Pseudomonas psychrotolerans L19]
Length = 365
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 141/216 (65%), Gaps = 15/216 (6%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEW Q WM WP ER DNWR AQ F VA AI++FEPVTV
Sbjct: 6 TPRADGFHMPAEWADQRQIWMVWP---ERPDNWRLGGKPAQAAFTAVAQAIARFEPVTVG 62
Query: 66 ASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
ASA Q+ENAR++L +IRV+E+S + +W RDTGPT V + V G+DW+F
Sbjct: 63 ASAQQYENARARLQHPHIRVVEISNDDAWCRDTGPTFVSDGQGG--------VRGVDWSF 114
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLP--RFPHSMVLEGGSIHVDGEGTCLTTEEC 182
N+WGG+D G Y W D QVA KIL+ E LP R P VLEGGSIHVDGEGT +TTEEC
Sbjct: 115 NAWGGLDGGLYFPWQRDDQVAGKILAIENLPGYRTP-DFVLEGGSIHVDGEGTLITTEEC 173
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
LLN NRNPHL + IE L YL V K+IWLP GL+
Sbjct: 174 LLNTNRNPHLDRETIERYLSDYLAVDKVIWLPHGLY 209
>gi|424922739|ref|ZP_18346100.1| agmatine deiminase [Pseudomonas fluorescens R124]
gi|404303899|gb|EJZ57861.1| agmatine deiminase [Pseudomonas fluorescens R124]
Length = 373
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 104/214 (48%), Positives = 142/214 (66%), Gaps = 10/214 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ +P E+E S CW+GWP ER D WR+ A AQ+V+ ++ +AI++ EPV
Sbjct: 5 LDSTPKHDGFRLPGEFEAKSGCWLGWP---ERTDVWRNGAKPAQKVWVQIVSAIAQSEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCASAAQ+ AR QLP +RV+EM+ N +WFRD+GP VVN S +V G+D+
Sbjct: 62 TVCASAAQFATARRQLPPQVRVVEMTCNDTWFRDSGPCFVVNDQSG-------EVRGVDF 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG+D G Y W D Q+A KIL ER R+ ++ E G I DG+G+ LTTE+C
Sbjct: 115 EFNAYGGLDGGLYYPWDKDDQIASKILEIERFDRYRAPLIAELGGIQSDGQGSILTTEQC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN+NRN HL K ++ L YLG ++IWLPRG
Sbjct: 175 LLNRNRNQHLGKDEVTRRLTDYLGAEQVIWLPRG 208
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 212 WLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAF 271
W G+ R AGT++ ASY+N+Y N I+ P FGD+ D A+ L++ F
Sbjct: 277 WTAEEAEGLDQQDSTHTRQAGTQICASYINYYAGNSSIVVPLFGDRN-DQVALATLAELF 335
Query: 272 PKYEVVGIERAREIVLGGGNIHCITQQQPA 301
P++++VGIE +REI+LGGGN+ CIT Q A
Sbjct: 336 PQHKIVGIENSREILLGGGNVACITMPQYA 365
>gi|430853638|ref|ZP_19471366.1| agmatine deiminase [Enterococcus faecium E1258]
gi|430540719|gb|ELA80921.1| agmatine deiminase [Enterococcus faecium E1258]
Length = 368
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 143/217 (65%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ +P + MP E+ H +M WP +R DNWRD AQR FA+VA AI+ FEPV
Sbjct: 4 IDSSPKKDHFRMPGEFSAHEGVYMLWP---QRPDNWRDGGKPAQRAFAEVARAIANFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ ++ Q++NAR LPE+IRV+E++ N SW RD GPT V N KV G+DW
Sbjct: 61 TMGVNSDQYDNARHMLPEHIRVVEIANNDSWVRDCGPTFVTNSQG--------KVRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG++DG Y W D QVA+KI E R+ + VLEGGSIHVDGEGT +TTEE
Sbjct: 113 TFNAWGGLEDGLYFPWDQDDQVAQKICEIEWKDRYRLDNFVLEGGSIHVDGEGTLITTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+K RNP L+K QIEN L YL + K+IWL RG++
Sbjct: 173 CLLSKGRNPQLSKEQIENILGEYLNIDKVIWLKRGIY 209
>gi|448932261|gb|AGE55821.1| agmatine deiminase [Acanthocystis turfacea Chlorella virus
MN0810.1]
Length = 361
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/373 (37%), Positives = 186/373 (49%), Gaps = 90/373 (24%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+EPH++ WM +P R DNWR+DA AQ+VF+ +A ISK E V +
Sbjct: 3 TPRQDGFRMPGEFEPHARTWMTFP---HRPDNWRNDAKDAQKVFSDLAREISKHEEVVML 59
Query: 66 ASAAQWENARSQLPEN-IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
A + L + +++ + W RDTG T V N ++ G+ W+F
Sbjct: 60 TPREHMYTAMTLLHDTKVKITAFPSDDCWVRDTGATFVSN---------GKEIRGVSWDF 110
Query: 125 NSWGGVDDGCYRDWSLDLQVARK--ILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
N+WGG DGCY W D +VA + +++ + R VLEGGSIHVDGE TC+TTEEC
Sbjct: 111 NAWGGHHDGCYTSWDKDSKVADRMGVVANASVYR-TEGFVLEGGSIHVDGEETCITTEEC 169
Query: 183 LLNKNRNP-------------HL----------------TKGQIEN-------------- 199
LL++ RNP HL T G ++N
Sbjct: 170 LLSEGRNPHLSKEDIENVLKEHLNVDKVLWLKHGVVDDETNGHVDNMACFARPGEVILAW 229
Query: 200 -------------ELKAYLGV--------MKI--IWLPRGLF-------GMIHDGEAKPR 229
E YL +KI + +PR +F G++ G A PR
Sbjct: 230 TDDIDHPQYERSAEAYEYLSSQTDAKGRPLKIHKLHIPRDMFITEEESSGVVESGLAVPR 289
Query: 230 LAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGG 289
AG RLAASYVNF + NG II P FGD +D A+ L FP+ V G +REI+LGG
Sbjct: 290 NAGDRLAASYVNFVMPNGAIIFPTFGDDIFDARALETLKSIFPERVVKGF-YSREILLGG 348
Query: 290 GNIHCITQQQPAI 302
GN+HC+TQQQPAI
Sbjct: 349 GNLHCVTQQQPAI 361
>gi|293569214|ref|ZP_06680515.1| agmatine deiminase [Enterococcus faecium E1071]
gi|416135217|ref|ZP_11598468.1| Putative agmatine deiminase [Enterococcus faecium E4452]
gi|427395534|ref|ZP_18888456.1| agmatine deiminase [Enterococcus durans FB129-CNAB-4]
gi|430821751|ref|ZP_19440341.1| agmatine deiminase [Enterococcus faecium E0045]
gi|430823944|ref|ZP_19442512.1| agmatine deiminase [Enterococcus faecium E0120]
gi|430844971|ref|ZP_19462868.1| agmatine deiminase [Enterococcus faecium E1050]
gi|430867076|ref|ZP_19482250.1| agmatine deiminase [Enterococcus faecium E1574]
gi|430963302|ref|ZP_19487594.1| agmatine deiminase [Enterococcus faecium E1576]
gi|431011219|ref|ZP_19489963.1| agmatine deiminase [Enterococcus faecium E1578]
gi|431237942|ref|ZP_19503357.1| agmatine deiminase [Enterococcus faecium E1622]
gi|431264147|ref|ZP_19506035.1| agmatine deiminase [Enterococcus faecium E1623]
gi|431290405|ref|ZP_19506540.1| agmatine deiminase [Enterococcus faecium E1626]
gi|431744971|ref|ZP_19533835.1| agmatine deiminase [Enterococcus faecium E2071]
gi|431768649|ref|ZP_19557082.1| agmatine deiminase [Enterococcus faecium E1321]
gi|447913476|ref|YP_007394888.1| Agmatine deiminase [Enterococcus faecium NRRL B-2354]
gi|291588082|gb|EFF19929.1| agmatine deiminase [Enterococcus faecium E1071]
gi|364092249|gb|EHM34638.1| Putative agmatine deiminase [Enterococcus faecium E4452]
gi|425724034|gb|EKU86920.1| agmatine deiminase [Enterococcus durans FB129-CNAB-4]
gi|430438137|gb|ELA48616.1| agmatine deiminase [Enterococcus faecium E0045]
gi|430441585|gb|ELA51677.1| agmatine deiminase [Enterococcus faecium E0120]
gi|430496402|gb|ELA72507.1| agmatine deiminase [Enterococcus faecium E1050]
gi|430550600|gb|ELA90386.1| agmatine deiminase [Enterococcus faecium E1574]
gi|430555727|gb|ELA95264.1| agmatine deiminase [Enterococcus faecium E1576]
gi|430560241|gb|ELA99547.1| agmatine deiminase [Enterococcus faecium E1578]
gi|430572486|gb|ELB11345.1| agmatine deiminase [Enterococcus faecium E1622]
gi|430576583|gb|ELB15234.1| agmatine deiminase [Enterococcus faecium E1623]
gi|430582505|gb|ELB20927.1| agmatine deiminase [Enterococcus faecium E1626]
gi|430604746|gb|ELB42180.1| agmatine deiminase [Enterococcus faecium E2071]
gi|430628517|gb|ELB64951.1| agmatine deiminase [Enterococcus faecium E1321]
gi|445189185|gb|AGE30827.1| Agmatine deiminase [Enterococcus faecium NRRL B-2354]
Length = 368
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 143/217 (65%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ +P + MP E+ H +M WP +R DNWRD AQR FA+VA AI+ FEPV
Sbjct: 4 IDSSPKKDHFRMPGEFSAHEGVYMLWP---QRPDNWRDGGKPAQRAFAEVARAIANFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ ++ Q++NAR LPE+IRV+E++ N SW RD GPT V N KV G+DW
Sbjct: 61 TMGVNSDQYDNARHMLPEHIRVVEIANNDSWVRDCGPTFVTNSQG--------KVRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG++DG Y W D QVA+KI E R+ + VLEGGSIHVDGEGT +TTEE
Sbjct: 113 TFNAWGGLEDGLYFPWDQDDQVAQKICEIEWKDRYRLDNFVLEGGSIHVDGEGTLITTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+K RNP L+K QIEN L YL + K+IWL RG++
Sbjct: 173 CLLSKGRNPQLSKEQIENILGEYLNIDKVIWLKRGIY 209
>gi|77456519|ref|YP_346024.1| agmatine deiminase [Pseudomonas fluorescens Pf0-1]
gi|77380522|gb|ABA72035.1| agmatine deiminase [Pseudomonas fluorescens Pf0-1]
Length = 368
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 147/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MPAEW P +Q WM WP ER DNWR AQ A VA AI++FEPV
Sbjct: 4 LKSTPRADGFYMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHAAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RD+GPT V+N S +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRVVEMSSDDAWVRDSGPTFVINNSG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYSPWNRDSQVGGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL + +IE L L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLGREEIEAMLSENLSVDKIIWLPDGLFNDETDG 216
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D D A +L FP++EVV + RE++LG
Sbjct: 294 RNPSVRLAGSYVNFLIVNGGIIAPSF-DDPMDAPAREILQNLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|398975376|ref|ZP_10685524.1| agmatine deiminase [Pseudomonas sp. GM25]
gi|398140600|gb|EJM29562.1| agmatine deiminase [Pseudomonas sp. GM25]
Length = 368
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 147/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MPAEW P +Q WM WP ER DNWR AQ A VA AI++FEPV
Sbjct: 4 LKSTPRADGFYMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHAAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RD+GPT V+N S +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRVVEMSSDDAWVRDSGPTFVINNSG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYSPWNRDSQVGGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL + +IE L L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLGREEIEAVLSENLSVDKIIWLPDGLFNDETDG 216
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D D A +L FP++EVV + RE++LG
Sbjct: 294 RNPSVRLAGSYVNFLIVNGGIIAPSF-DDPMDAPAREILQNLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|398851316|ref|ZP_10608002.1| agmatine deiminase [Pseudomonas sp. GM80]
gi|398246825|gb|EJN32299.1| agmatine deiminase [Pseudomonas sp. GM80]
Length = 368
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 148/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MPAEW P +Q WM WP ER DNWR AQ A VA AI++FEPV
Sbjct: 4 LKSTPRADGFHMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHAAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RD+GPT V+N + +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRVVEMSSDDAWVRDSGPTFVINNNG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG D G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFDGGLYSPWNRDSQVGGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHL + +IE L A L V KIIWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLGREEIEAVLSANLSVDKIIWLPDGLFNDETDG 216
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D D A +L + FP++EVV + RE++LG
Sbjct: 294 RNPSVRLAGSYVNFLIVNGGIIAPSF-DDPMDAGAKEILQKLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|260768695|ref|ZP_05877629.1| agmatine deiminase [Vibrio furnissii CIP 102972]
gi|260616725|gb|EEX41910.1| agmatine deiminase [Vibrio furnissii CIP 102972]
Length = 362
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/224 (50%), Positives = 137/224 (61%), Gaps = 11/224 (4%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
ME+ GTP +G+ PAE+ P Q WM WP R DNWRD+ AQR FA VA AIS+
Sbjct: 1 MELTGTPKQNGFYFPAEFAPQEQVWMAWPFR---PDNWRDNGEPAQRAFADVAMAISRKA 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
VTV +A E AR+ LPE I V+EM+ N +W RD GPT+VVN G I
Sbjct: 58 KVTVAVTADYLEAARALLPEPISVVEMAYNDAWMRDIGPTMVVNADGERRG--------I 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG +G Y W D QVA +I + + + VLEGG+IH DGEGT TTE
Sbjct: 110 SWQFNAWGGEYNGLYAHWREDDQVAGQICNQLNVDHYQAPFVLEGGAIHTDGEGTLYTTE 169
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLL+ RNPHL++ IE +L YLG+ K+IWLPRGLF DG
Sbjct: 170 ECLLSPGRNPHLSREAIEAQLAQYLGIRKVIWLPRGLFNDETDG 213
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R AG RL SY NF + N I P D D +A+ VL A P YE++G+ REI+LG
Sbjct: 290 RAAGERLGGSYANFLMCNQSIFLPLL-DDTMDKQAIAVLQTALPDYEIIGVA-TREILLG 347
Query: 289 GGNIHCITQQQPA 301
GGNIHCITQQ PA
Sbjct: 348 GGNIHCITQQIPA 360
>gi|430851179|ref|ZP_19468932.1| agmatine deiminase [Enterococcus faecium E1185]
gi|430534413|gb|ELA74865.1| agmatine deiminase [Enterococcus faecium E1185]
Length = 368
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 142/217 (65%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ +P + MP E+ H +M WP +R DNWRD AQR F +VA AI+ FEPV
Sbjct: 4 IDSSPKKDHFRMPGEFSAHEGVYMLWP---QRPDNWRDGGKPAQRAFVEVARAIANFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ ++ Q++NAR LPE+IRV+E++ N SW RD GPT V N KV G+DW
Sbjct: 61 TMSVNSDQYDNARHMLPEHIRVVEIANNDSWVRDCGPTFVTNSQG--------KVRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG++DG Y W D QVA+KI E R+ + VLEGGSIHVDGEGT +TTEE
Sbjct: 113 TFNAWGGLEDGLYFPWDQDDQVAQKICEIEWKDRYRLDNFVLEGGSIHVDGEGTLITTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+K RNP L+K QIEN L YL + K+IWL RG++
Sbjct: 173 CLLSKGRNPQLSKEQIENILGEYLNIDKVIWLKRGIY 209
>gi|388545313|ref|ZP_10148596.1| peptidyl-arginine deiminase [Pseudomonas sp. M47T1]
gi|388276633|gb|EIK96212.1| peptidyl-arginine deiminase [Pseudomonas sp. M47T1]
Length = 370
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 142/211 (67%), Gaps = 10/211 (4%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ +P E+EP ++CW+GWP ER D WR+ AQ+V+ ++ +AI+ EPVTVC
Sbjct: 8 TPKADGFRLPGEFEPKARCWLGWP---ERPDVWRNGGKPAQQVWVQIVSAIAHSEPVTVC 64
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
ASAAQ+ NAR LPE++RV+EM+ N +WFRD+GP VVN S +V G+D+ FN
Sbjct: 65 ASAAQYANARQLLPEHVRVVEMTCNDTWFRDSGPCFVVNDDSG-------EVRGVDFQFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
++GG+D G Y W D Q+A+KIL E R+ ++ E G + DG+G+ LTTE+CLLN
Sbjct: 118 AYGGLDGGLYYPWDKDDQIAQKILEIEHFDRYRAPLIAELGGLQSDGQGSILTTEQCLLN 177
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
+NRN HL K ++ L YLG ++IWLPRG
Sbjct: 178 RNRNAHLGKDEVTRRLTDYLGAEQVIWLPRG 208
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 212 WLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAF 271
W G+ H R AGT++ ASY+N+Y N I+ P FG ++D A L++ F
Sbjct: 277 WTAEEAAGLDHIDGTHVRQAGTKICASYINYYAGNSVIVVPLFG-GRFDQAAQATLAELF 335
Query: 272 PKYEVVGIERAREIVLGGGNIHCITQQQPA 301
P + ++GIE +REI+LGGGN+ CIT Q A
Sbjct: 336 PGHRIIGIENSREILLGGGNVACITMPQYA 365
>gi|448926756|gb|AGE50332.1| agmatine deiminase [Acanthocystis turfacea Chlorella virus Canal-1]
Length = 361
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 186/372 (50%), Gaps = 88/372 (23%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+EPH++ +M +P R DNWR++A +AQR+FA +A I+ E V +
Sbjct: 3 TPRQDGFRMPGEFEPHARTFMIFP---HRQDNWRNNAKNAQRIFADLAREIANHEEVVML 59
Query: 66 ASAAQWENARSQLPEN-IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
A L + +R+ + W RDTG T V N + ++ G+ W+F
Sbjct: 60 TPREHVYTAMILLHDTKVRITAFDSDDCWARDTGATFVSNGT---------ELRGVSWDF 110
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECL 183
N+WGG DGCY +W D +VA ++ + + VLEGGSIHVDG+GTC+TTEECL
Sbjct: 111 NAWGGHYDGCYANWDNDSKVAERMCTLANASIYHTKGFVLEGGSIHVDGDGTCVTTEECL 170
Query: 184 LNKNRNPH---------------------LTKGQIENELKAYL---------GVMKIIW- 212
L+K RNPH L +G +++E ++ G + + W
Sbjct: 171 LSKGRNPHLTKEDIEGVLKEHLNVDKVLWLKRGVVDDETNGHVDNMACFARPGEIVLAWT 230
Query: 213 -----------------------------------LPRGLF-------GMIHDGEAKPRL 230
+PR LF G++ G A PR
Sbjct: 231 DDTTHPQYERSKEAYDYLMSQTDAKGRPLKIHKLHIPRDLFITEEEASGVVQSGVANPRN 290
Query: 231 AGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGG 290
AG RLAASYVNF + NG I+ P FGD +D A+ L FP+ EV G +REI+LGGG
Sbjct: 291 AGDRLAASYVNFVMPNGVILFPTFGDDVYDLRALETLKSIFPEREVKGF-YSREILLGGG 349
Query: 291 NIHCITQQQPAI 302
N+HC+TQQQP +
Sbjct: 350 NLHCVTQQQPIV 361
>gi|409402373|ref|ZP_11251939.1| agmatine deiminase [Acidocella sp. MX-AZ02]
gi|409129004|gb|EKM98876.1| agmatine deiminase [Acidocella sp. MX-AZ02]
Length = 359
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 145/369 (39%), Positives = 183/369 (49%), Gaps = 90/369 (24%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEW H CWM WP ER DNWR A AQ+ F VA+AI++FEPVT+
Sbjct: 6 TPREAGFAMPAEWAAHDGCWMIWP---ERPDNWRLGAKPAQKAFVAVASAIARFEPVTML 62
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S AQ+ENAR+ LP +RV+EMS N +W RD T ++ K+ G+DW F
Sbjct: 63 VSHAQYENARASLPPAVRVVEMSSNDAWARDIACTFLLGPDG--------KLGGVDWPFK 114
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGT------CLTT 179
SWGG+ Y W D +A K+L ER F +V+EGG++HVDGEGT C+
Sbjct: 115 SWGGL----YFPWDKDDAIASKMLGLERATAFRAPLVIEGGALHVDGEGTVLCVEQCVLN 170
Query: 180 EECLLNKNRN----------------------PH-LTKGQIEN----------------- 199
E N R PH T G ++N
Sbjct: 171 ENRNPNITRQDMERMLKDYLGVSHVIWIAEGVPHDETDGHVDNLVCFVKPGVVLLSWCDD 230
Query: 200 --------------------ELKAYLGVMKIIWLPRGLF-------GMIHDGEAKPRLAG 232
+ K V++ I +P +F G+ R AG
Sbjct: 231 PADAHYAVSRAAEAALQGARDAKGRALVIEKIPMPTPMFYTQEEADGVDATASGMNRRAG 290
Query: 233 TRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNI 292
RLAASYVNFYIANG I+ P FG + D A VL++ FP+ E+V I AREI+LGGGNI
Sbjct: 291 ERLAASYVNFYIANGAIVAPAFGVET-DEAARAVLARLFPEREIVMIP-AREILLGGGNI 348
Query: 293 HCITQQQPA 301
HCITQQQPA
Sbjct: 349 HCITQQQPA 357
>gi|323497760|ref|ZP_08102775.1| agmatine deiminase [Vibrio sinaloensis DSM 21326]
gi|323317236|gb|EGA70232.1| agmatine deiminase [Vibrio sinaloensis DSM 21326]
Length = 363
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 145/216 (67%), Gaps = 11/216 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MP E EP S+ WM WP ER DNWR+ A AQ+VFA VA ISK PV
Sbjct: 5 LDTTPRQDGFRMPGEHEPQSEVWMAWP---ERTDNWRNGAKPAQKVFADVAEQISKTTPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ S+AQ++NA S+LP+++RV+E++ + SW RD G T VVN G +DW
Sbjct: 62 TMLVSSAQYDNAVSRLPDDVRVLEVTTDDSWMRDIGATYVVNDEQERRG--------VDW 113
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG+ DG Y W+ D QVA+K+ T+R R+ +VLEGGSIHVDGEGT TTEEC
Sbjct: 114 EFNAWGGLVDGLYSPWNHDDQVAQKMCETKRDLRYRAPIVLEGGSIHVDGEGTLYTTEEC 173
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
LL+++RNP +K ++ L +L + K+IWLP+GL+
Sbjct: 174 LLHESRNPDYSKEELTQVLCDHLNIDKVIWLPKGLY 209
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 224 GEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAR 283
E R AG RLAASY N+ I N I+ P D+++D + +L +P YEV G+ AR
Sbjct: 287 AEGMEREAGERLAASYANYLITNNQIVLPLL-DERYDEDVKHILESIYPGYEVNGVP-AR 344
Query: 284 EIVLGGGNIHCITQQQPAI 302
EI+LGGGNIHCITQQ P +
Sbjct: 345 EILLGGGNIHCITQQIPQV 363
>gi|157375542|ref|YP_001474142.1| agmatine deiminase [Shewanella sediminis HAW-EB3]
gi|157317916|gb|ABV37014.1| Agmatine deiminase [Shewanella sediminis HAW-EB3]
Length = 365
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 141/214 (65%), Gaps = 11/214 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MP E+EP CW+GWP ER D WR+ A AQ+V+ ++ TAI++ E V
Sbjct: 5 LDSTPRQDGFRMPGEFEPKKGCWLGWP---ERCDVWRNGAKPAQKVWVQICTAIAQSELV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVC S AQ+ENAR+ LP+ +RV+EMS N +WFRD+ +VN V G DW
Sbjct: 62 TVCVSQAQYENARAMLPDTVRVVEMSTNDAWFRDSACAFLVNDRG--------DVRGTDW 113
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG++ G Y W D Q+A+KIL E L R+ ++ E G I DG+GT LTTE+C
Sbjct: 114 TFNAYGGLNGGLYFPWDSDDQIAQKILEIENLDRYRSPLIAEMGGIQCDGQGTLLTTEQC 173
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN NRN HL+K +E +L+ Y+GV KIIWLPRG
Sbjct: 174 LLNPNRNGHLSKEAVEQQLRDYMGVEKIIWLPRG 207
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R+AGT++ ASY+N+YI N I+ P + D D A VL FPK++V+GI AREI+LG
Sbjct: 293 RVAGTKICASYINYYIGNDIIMVPAY-DDPMDEPAQAVLRTLFPKHKVIGIPNAREILLG 351
Query: 289 GGNIHCITQQQPA 301
GGN+ CITQ Q A
Sbjct: 352 GGNVACITQPQYA 364
>gi|431444848|ref|ZP_19513577.1| agmatine deiminase [Enterococcus faecium E1630]
gi|431760451|ref|ZP_19549050.1| agmatine deiminase [Enterococcus faecium E3346]
gi|430586010|gb|ELB24276.1| agmatine deiminase [Enterococcus faecium E1630]
gi|430623891|gb|ELB60559.1| agmatine deiminase [Enterococcus faecium E3346]
Length = 368
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 142/217 (65%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ +P + MP E+ H +M WP +R DNWRD AQR F +VA AI+ FEPV
Sbjct: 4 IDSSPKKDHFRMPGEFSAHEGVYMLWP---QRPDNWRDGGKPAQRAFVEVARAIANFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ ++ Q++NAR LPE+IRV+E++ N SW RD GPT V N KV G+DW
Sbjct: 61 TMGVNSDQYDNARHMLPEHIRVVEIANNDSWVRDCGPTFVTNSQG--------KVRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG++DG Y W D QVA+KI E R+ + VLEGGSIHVDGEGT +TTEE
Sbjct: 113 TFNAWGGLEDGLYFPWDQDDQVAQKICEIEWKDRYRLDNFVLEGGSIHVDGEGTLITTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+K RNP L+K QIEN L YL + K+IWL RG++
Sbjct: 173 CLLSKGRNPQLSKEQIENILGEYLNIDKVIWLKRGIY 209
>gi|398992246|ref|ZP_10695264.1| agmatine deiminase [Pseudomonas sp. GM24]
gi|399014629|ref|ZP_10716916.1| agmatine deiminase [Pseudomonas sp. GM16]
gi|398110385|gb|EJM00290.1| agmatine deiminase [Pseudomonas sp. GM16]
gi|398133066|gb|EJM22307.1| agmatine deiminase [Pseudomonas sp. GM24]
Length = 371
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 140/214 (65%), Gaps = 10/214 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ +P E+E S CW+GWP ER D WR+ A AQ+V+ ++ TAIS EPV
Sbjct: 5 LDSTPKQDGFRLPGEFETKSGCWLGWP---ERTDVWRNGAKPAQKVWVQIVTAISHSEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCASAAQ+ AR QLP +RV+EM+ N +WFRD+GP VVN S +V G+D+
Sbjct: 62 TVCASAAQFATARRQLPPQVRVVEMTCNDTWFRDSGPCFVVNDQSG-------EVRGVDF 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG+D G Y W D Q+A KIL ER R+ ++ E G I DG+G+ LTTE+C
Sbjct: 115 EFNAYGGLDGGLYYPWDKDDQIASKILEIERFDRYRAPLIAELGGIQSDGQGSILTTEQC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN+NRN HL K ++ L LG ++IWLPRG
Sbjct: 175 LLNRNRNQHLGKDEVTRRLTDNLGAEQVIWLPRG 208
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 212 WLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAF 271
W G+ R AGT++ ASY+N+Y N I+ P FGD+ D A+ L++ F
Sbjct: 277 WTAEEADGLDQQDSTHTRQAGTKICASYINYYAGNSSIVVPLFGDRN-DKVAMATLAELF 335
Query: 272 PKYEVVGIERAREIVLGGGNIHCITQQQPA 301
P++++VGIE +REI+LGGGN+ CIT Q A
Sbjct: 336 PQHKIVGIENSREILLGGGNVACITMPQYA 365
>gi|425899094|ref|ZP_18875685.1| agmatine deiminase [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|397890402|gb|EJL06884.1| agmatine deiminase [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
Length = 374
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/214 (48%), Positives = 142/214 (66%), Gaps = 10/214 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ +P E+E + CW+GWP ER D WR+ A AQ+V+ ++ TAI++ EPV
Sbjct: 5 LDTTPKHDGFRLPGEFEAKAGCWLGWP---ERTDVWRNGAKPAQKVWVRIVTAIAQSEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCASAAQ+ NAR LP +RV+EM+ N +WFRD+GP VVN S +V G+D+
Sbjct: 62 TVCASAAQFANARRLLPPQVRVVEMTCNDTWFRDSGPCFVVNDQSG-------EVRGVDF 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG+D G Y W D Q+A KIL E L R+ ++ E G I DG+G+ LTTE+C
Sbjct: 115 EFNAYGGLDGGLYYPWDKDDQIAAKILEIENLDRYRAPLIAELGGIQSDGQGSILTTEQC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN+NRN HL K ++ L YLG ++IWLPRG
Sbjct: 175 LLNRNRNQHLGKAEVTRRLTDYLGAEQVIWLPRG 208
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R AGTR+ ASY+N+Y N I+ P FGD+ D A+ L++ FP++ +VGI+ +REI+LG
Sbjct: 294 RQAGTRICASYINYYAGNSAIVVPLFGDRN-DKTALATLAELFPRHRIVGIDNSREILLG 352
Query: 289 GGNIHCITQQQPAIP 303
GGN+ CIT Q A P
Sbjct: 353 GGNVACITMPQYAAP 367
>gi|261209074|ref|ZP_05923478.1| agmatine deiminase [Enterococcus faecium TC 6]
gi|289567301|ref|ZP_06447679.1| agmatine deiminase [Enterococcus faecium D344SRF]
gi|294615511|ref|ZP_06695375.1| agmatine deiminase [Enterococcus faecium E1636]
gi|294618850|ref|ZP_06698368.1| agmatine deiminase [Enterococcus faecium E1679]
gi|431384752|ref|ZP_19511493.1| agmatine deiminase [Enterococcus faecium E1627]
gi|431698482|ref|ZP_19524845.1| agmatine deiminase [Enterococcus faecium E1904]
gi|260076986|gb|EEW64709.1| agmatine deiminase [Enterococcus faecium TC 6]
gi|289160902|gb|EFD08824.1| agmatine deiminase [Enterococcus faecium D344SRF]
gi|291591629|gb|EFF23274.1| agmatine deiminase [Enterococcus faecium E1636]
gi|291594905|gb|EFF26264.1| agmatine deiminase [Enterococcus faecium E1679]
gi|430580909|gb|ELB19367.1| agmatine deiminase [Enterococcus faecium E1627]
gi|430597442|gb|ELB35239.1| agmatine deiminase [Enterococcus faecium E1904]
Length = 368
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 142/217 (65%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ +P + MP E+ H +M WP +R DNWRD AQR F +VA AI+ FEPV
Sbjct: 4 IDSSPKKDHFRMPGEFSAHEGVYMLWP---QRPDNWRDGGKPAQRAFVEVARAIANFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ ++ Q++NAR LPE+IRV+E++ N SW RD GPT V N KV G+DW
Sbjct: 61 TMGVNSDQYDNARHMLPEHIRVVEIANNDSWVRDCGPTFVTNSQG--------KVRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG++DG Y W D QVA+KI E R+ + VLEGGSIHVDGEGT +TTEE
Sbjct: 113 TFNAWGGLEDGLYFPWDQDDQVAQKICEIEWKDRYRLDNFVLEGGSIHVDGEGTLITTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+K RNP L+K QIEN L YL + K+IWL RG++
Sbjct: 173 CLLSKGRNPQLSKEQIENILGEYLNIDKVIWLKRGIY 209
>gi|92113310|ref|YP_573238.1| peptidyl-arginine deiminase [Chromohalobacter salexigens DSM 3043]
gi|91796400|gb|ABE58539.1| agmatine deiminase [Chromohalobacter salexigens DSM 3043]
Length = 370
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/221 (51%), Positives = 140/221 (63%), Gaps = 11/221 (4%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
TPA G+ MPAE+ PH CWM WP +R DNWR A AQ F VA AI++ E V
Sbjct: 12 TATPAELGFSMPAEFAPHDACWMLWP---QRPDNWRYGAKPAQAAFVAVARAIAESETVF 68
Query: 64 VCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWN 123
V + Q+ENAR+QLP IRVIE+S N +W RD GPT + + ++A +DW
Sbjct: 69 VGVNDDQYENARNQLPSRIRVIELSSNDAWMRDVGPTFLTHPDG--------RLAMVDWE 120
Query: 124 FNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECL 183
FN+WGG++ G Y W D ++ +KI + RF +V+EGG+IHVDGEGT +TTEECL
Sbjct: 121 FNAWGGLNGGLYFPWDKDRRIRQKIAEVLGIERFITPLVVEGGAIHVDGEGTLITTEECL 180
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LN NRNP L K +IE L AYLGV KIIWLPRG F DG
Sbjct: 181 LNPNRNPDLAKPEIERLLCAYLGVEKIIWLPRGCFQDETDG 221
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++PR G R+AASYVNFYI N ++ P+ D D EA +L FP VV ++ AREI
Sbjct: 296 SRPRQPGDRMAASYVNFYIGNSVVVMPRL-DPAHDDEAHAILENLFPGRRVVAVD-AREI 353
Query: 286 VLGGGNIHCITQQQPAI 302
+LGGGNIHCITQQQP +
Sbjct: 354 LLGGGNIHCITQQQPRV 370
>gi|406580142|ref|ZP_11055361.1| agmatine deiminase [Enterococcus sp. GMD4E]
gi|406582335|ref|ZP_11057461.1| agmatine deiminase [Enterococcus sp. GMD3E]
gi|406584606|ref|ZP_11059632.1| agmatine deiminase [Enterococcus sp. GMD2E]
gi|406589770|ref|ZP_11064193.1| agmatine deiminase [Enterococcus sp. GMD1E]
gi|410936901|ref|ZP_11368763.1| agmatine deiminase [Enterococcus sp. GMD5E]
gi|404454582|gb|EKA01507.1| agmatine deiminase [Enterococcus sp. GMD4E]
gi|404458260|gb|EKA04702.1| agmatine deiminase [Enterococcus sp. GMD3E]
gi|404463894|gb|EKA09471.1| agmatine deiminase [Enterococcus sp. GMD2E]
gi|404470336|gb|EKA14978.1| agmatine deiminase [Enterococcus sp. GMD1E]
gi|410734494|gb|EKQ76413.1| agmatine deiminase [Enterococcus sp. GMD5E]
Length = 368
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 143/217 (65%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ +P + MP E+ H +M WP +R +NWRD AQR FA+VA AI+ FEPV
Sbjct: 4 IDSSPKKDHFRMPGEFSAHEGVYMLWP---QRPENWRDGGKPAQRAFAEVARAIANFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ ++ Q++NAR LPE+IRV+E++ N SW RD GPT V N KV G+DW
Sbjct: 61 TMGVNSDQYDNARHMLPEHIRVVEIANNDSWVRDCGPTFVTNSQG--------KVRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG++DG Y W D QVA+KI E R+ + VLEGGSIHVDGEGT +TTEE
Sbjct: 113 TFNAWGGLEDGLYFPWDQDDQVAQKICEIEWKDRYHLDNFVLEGGSIHVDGEGTLITTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+K RNP L+K QIEN L YL + K+IWL RG++
Sbjct: 173 CLLSKGRNPQLSKEQIENILGEYLNIDKVIWLKRGIY 209
>gi|312864370|ref|ZP_07724603.1| agmatine deiminase [Streptococcus downei F0415]
gi|311100091|gb|EFQ58302.1| agmatine deiminase [Streptococcus downei F0415]
Length = 365
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 110/215 (51%), Positives = 143/215 (66%), Gaps = 12/215 (5%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N TP G+ MPAE+EP Q WM WP ER DNWR A AQ+ F VATAIS+FEPVT
Sbjct: 7 NSTPKQDGFRMPAEFEPQKQIWMVWP---ERPDNWRWGAKPAQKSFVNVATAISQFEPVT 63
Query: 64 VCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWN 123
+C + +Q++NAR+QLP IRV+EM+ + SW RD+GPT VVN ++ DW
Sbjct: 64 MCVNPSQYQNARAQLPSQIRVVEMASDDSWVRDSGPTFVVNDQG--------QIRANDWT 115
Query: 124 FNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG+ DG Y W D QVA+KI E + + + VLEGGSI VDG+GT +TTE C
Sbjct: 116 FNAWGGLVDGLYFPWDKDDQVAQKICEIEGVDSYRTNGFVLEGGSITVDGQGTLITTEMC 175
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
LL+ RNP +TK +IE++LK +L + KIIW+ G+
Sbjct: 176 LLSPGRNPDMTKEEIEDKLKEHLNLEKIIWVKDGI 210
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I NGGII PQ+GD D AV+ + FP Y+VVG+ R E+
Sbjct: 293 PREEGEISIASYMNFLIVNGGIILPQYGDAN-DDLAVQQVQAMFPDYKVVGV-RTEEVAY 350
Query: 288 GGGNIHCITQQQPAI 302
GGGNIHCITQQ+PA+
Sbjct: 351 GGGNIHCITQQEPAV 365
>gi|398872672|ref|ZP_10627957.1| agmatine deiminase [Pseudomonas sp. GM74]
gi|398202047|gb|EJM88904.1| agmatine deiminase [Pseudomonas sp. GM74]
Length = 369
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 140/214 (65%), Gaps = 10/214 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ +P E+E S CW+GWP ER D WR+ A AQ+V+ ++ TAIS EPV
Sbjct: 5 LDTTPKQDGFRLPGEFEAKSGCWLGWP---ERTDVWRNGAKPAQKVWVQIVTAISMSEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCASAAQ+ AR QLP +RV+EM+ N +WFRD+GP VVN S +V G+D+
Sbjct: 62 TVCASAAQFATARRQLPPQVRVVEMTCNDTWFRDSGPCFVVNDRSG-------EVRGVDF 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG+D G Y W D Q+A KIL E R+ ++ E G I DG+G+ LTTE+C
Sbjct: 115 EFNAYGGLDGGLYYPWDKDDQIASKILEIEGFDRYRAPLIAELGGIQSDGQGSILTTEQC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN+NRN HL K ++ L YLG ++IWLPRG
Sbjct: 175 LLNRNRNQHLGKDEVTRRLTDYLGAEQVIWLPRG 208
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 212 WLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAF 271
W G+ R AGT++ ASY+N+Y N I+ P FGD+ D A+ L++ F
Sbjct: 277 WTAEEAEGLDQQDSTHTRQAGTKICASYINYYAGNSSIVVPLFGDRN-DKVALATLAELF 335
Query: 272 PKYEVVGIERAREIVLGGGNIHCITQQQPA 301
PK+ +VGIE +REI+LGGGN+ CIT Q A
Sbjct: 336 PKHSIVGIENSREILLGGGNVACITMPQYA 365
>gi|424920889|ref|ZP_18344250.1| agmatine deiminase [Pseudomonas fluorescens R124]
gi|404302049|gb|EJZ56011.1| agmatine deiminase [Pseudomonas fluorescens R124]
Length = 368
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 148/224 (66%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MPAEW P +Q WM WP ER DNWR AQ A VA AI++FEPV
Sbjct: 4 LKSTPRDDGFYMPAEWAPQTQTWMIWP---ERPDNWRLGGKPAQAAHAAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RD+GPT V+N S +V G++
Sbjct: 61 TVAVSAGQYENARARLDVPNIRVVEMSSDDAWVRDSGPTFVINNSG--------EVRGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W+FN+WGG + G Y W+ D QV KIL ER PR+ VLEGGSIHVDGEGT +TTE
Sbjct: 113 WDFNAWGGFEGGLYSPWNRDSQVGGKILEIERSPRYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN NRNPHL++ +IE L+ L V KIIWLP GLF DG
Sbjct: 173 ECLLNHNRNPHLSREEIEAVLRDNLSVDKIIWLPDGLFNDETDG 216
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R RLA SYVNF I NGGII P F D D A +L + FP++EVV + RE++LG
Sbjct: 294 RNPSVRLAGSYVNFLIVNGGIIAPSF-DDPMDAPAREILQKLFPQHEVVMVP-GRELLLG 351
Query: 289 GGNIHCITQQQPA 301
GGNIHC+TQQQPA
Sbjct: 352 GGNIHCLTQQQPA 364
>gi|373465368|ref|ZP_09556837.1| agmatine deiminase [Lactobacillus kisonensis F0435]
gi|371760827|gb|EHO49497.1| agmatine deiminase [Lactobacillus kisonensis F0435]
Length = 366
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 113/217 (52%), Positives = 140/217 (64%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ P G+ MPAE+EPH +M WP R DNWR+ A AQR FA VA AI++FE V
Sbjct: 7 LQSNPKQDGFRMPAEFEPHQGVYMLWPTR---PDNWRNGAKPAQRTFANVAKAIAQFEHV 63
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV + Q+ NAR LP + V+E+S N +W RD GPTIV N QA + GIDW
Sbjct: 64 TVGVADDQYVNARHLLPAEVEVVELSSNDAWVRDCGPTIVTN--------QAGERRGIDW 115
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
+FN+ GG+ DG Y W D +VA+KI E L R+ VLEGG+IHVDGEGT +TTEE
Sbjct: 116 HFNALGGLVDGLYFPWDKDDRVAQKITELEHLDRYRLDDFVLEGGAIHVDGEGTLITTEE 175
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+K RNP L+K QIEN LK YL V K+IWL G++
Sbjct: 176 CLLSKGRNPELSKSQIENLLKEYLNVSKVIWLKHGIY 212
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR AG RLAASYVN+Y ANGGI+ P FGD D +A L + +P ++VG+ AREI+L
Sbjct: 295 PRRAGDRLAASYVNYYTANGGIVFPMFGDLN-DQKAQATLQRLYPDRKIVGV-YAREIIL 352
Query: 288 GGGNIHCITQQQP 300
GGGNIHC+TQQ P
Sbjct: 353 GGGNIHCVTQQIP 365
>gi|293553087|ref|ZP_06673727.1| agmatine deiminase [Enterococcus faecium E1039]
gi|291602757|gb|EFF32969.1| agmatine deiminase [Enterococcus faecium E1039]
Length = 368
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 142/217 (65%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ +P + MP E+ H +M WP +R DNWRD AQR F +VA AI+ FEPV
Sbjct: 4 IDSSPKKDHFRMPGEFSAHEGVYMLWP---QRPDNWRDGGKPAQRAFVEVARAIANFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ ++ Q++NAR LPE+IRV+E++ N SW RD GPT V N KV G+DW
Sbjct: 61 TMGVNSDQYDNARHMLPEHIRVVEIANNDSWVRDCGPTFVTNSQG--------KVRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG++DG Y W D QVA+KI E R+ + VLEGGSIH+DGEGT +TTEE
Sbjct: 113 TFNAWGGLEDGLYFPWDQDDQVAQKICEIEWKDRYRLDNFVLEGGSIHIDGEGTLITTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+K RNP L+K QIEN L YL + K+IWL RG++
Sbjct: 173 CLLSKGRNPQLSKEQIENILGEYLNIDKVIWLKRGIY 209
>gi|300857369|ref|YP_003782353.1| agmatine deiminase [Clostridium ljungdahlii DSM 13528]
gi|300437484|gb|ADK17251.1| agmatine deiminase [Clostridium ljungdahlii DSM 13528]
Length = 365
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/213 (49%), Positives = 138/213 (64%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP GY MP E+E H++ WM WP ER DNWRD A AQ+ +A+VA AI+KFEPVT+C
Sbjct: 9 TPKQDGYRMPGEFEKHTRTWMLWP---ERPDNWRDGAKPAQKAYAEVAKAINKFEPVTMC 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S Q+ N R QLP IRV+E++ N SW RD GP+ V+N + G DW FN
Sbjct: 66 VSKEQYANCREQLPSEIRVVEIASNDSWIRDCGPSFVINDKGG--------IRGCDWEFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHS-MVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W D VARK+ E + + + VLEGGSIH+DGEGT +TTE CLL
Sbjct: 118 AWGGLVDGLYFPWDQDDLVARKVCEIEGIDTYRTTGFVLEGGSIHIDGEGTVITTEMCLL 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
++ RNPH++K +IE +L YL K+IW+ G+
Sbjct: 178 SEGRNPHMSKEEIEKKLCDYLNCEKVIWVKDGI 210
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I NGG+I PQ+GD+ D A++ + FP+ + VG+ RE+V
Sbjct: 293 PREDGDICIASYMNFLIVNGGVIVPQYGDEN-DALALKQVQAMFPERKAVGV-NTREVVY 350
Query: 288 GGGNIHCITQQQPAI 302
GGGNIHCITQQQPA+
Sbjct: 351 GGGNIHCITQQQPAV 365
>gi|347547547|ref|YP_004853875.1| hypothetical protein LIV_0038 [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346980618|emb|CBW84519.1| Conserved hypothetical protein [Listeria ivanovii subsp. ivanovii
PAM 55]
Length = 369
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 143/218 (65%), Gaps = 12/218 (5%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
+ NG P G+ MP E+EPH C+M WP ER DNWR AQ+ + VA AISK+EP
Sbjct: 3 QRNGLPIEDGFRMPGEYEPHVGCFMIWP---ERPDNWRLGGKPAQQNYKDVAIAISKYEP 59
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VT+ S Q++NAR++LP+ IRVIEMS + +W RD GP+ ++N A + G++
Sbjct: 60 VTMFVSGNQYKNARNELPDAIRVIEMSNDDAWIRDYGPSFLINDKGA--------MRGVN 111
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG+ DG Y W D Q+A+KI ER+ + P + +LEG S+HVDGEGT +TTE
Sbjct: 112 WGFNAWGGLLDGLYFPWDKDDQMAKKICDLERIDYYSPENFILEGCSLHVDGEGTLVTTE 171
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
ECLL++ RNP LTK +IE LK Y V K+IWL G +
Sbjct: 172 ECLLSEGRNPKLTKAEIEATLKKYFNVEKVIWLKHGFY 209
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 91/172 (52%), Gaps = 19/172 (11%)
Query: 146 RKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL----NKNRNPHLTKGQ----I 197
+K + E++ H L+ + HVD +T E +L NK+ ++ + +
Sbjct: 193 KKYFNVEKVIWLKHGFYLDETNGHVDNIFNFVTPGEVVLSWTDNKSDPQYIISRECYEIL 252
Query: 198 ENELKAYLGVMKIIWLPRGLFGMIHDGEAK---------PRLAGTRLAASYVNFYIANGG 248
NE A +KI L +I E++ PR AG RLAASYVN+Y ANG
Sbjct: 253 ANETDAKGRKIKIHQLHCPDPVLITQVESEGVEAINGTFPRQAGDRLAASYVNYYTANGA 312
Query: 249 IITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
II P F D K D +A +L + +P E++GI +AREI+LGGGNIHCITQ P
Sbjct: 313 IIFPLFDDPK-DKDASELLGKLYPDREIIGI-KAREILLGGGNIHCITQHIP 362
>gi|323492811|ref|ZP_08097953.1| hypothetical protein VIBR0546_11837 [Vibrio brasiliensis LMG 20546]
gi|323312882|gb|EGA66004.1| hypothetical protein VIBR0546_11837 [Vibrio brasiliensis LMG 20546]
Length = 360
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 108/224 (48%), Positives = 140/224 (62%), Gaps = 11/224 (4%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M++ TPA G+ PAE++P SQ W+ WP ER DNWRDDAL AQ FA++A AIS+
Sbjct: 1 MQLFTTPAQDGFYFPAEFQPVSQVWLAWP---ERRDNWRDDALPAQLTFARIANAISEVT 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
V V S+ Q+++AR L +R++E+ N +W RD GPT++VN+S G I
Sbjct: 58 KVCVAVSSKQFDHARDLLQPEVRLVEIPYNDAWMRDIGPTVLVNESGERRG--------I 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG +G Y +W D VA + + + VLEGGSIH DGEGT TTE
Sbjct: 110 SWQFNAWGGEYNGLYDNWQQDDLVASSVCDIIGIDHYSAPFVLEGGSIHTDGEGTLYTTE 169
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLL+ RNP LTK QIE +LK YL + K+IWLP+GLF DG
Sbjct: 170 ECLLSPGRNPLLTKQQIEEQLKQYLSIEKVIWLPKGLFNDETDG 213
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 90/174 (51%), Gaps = 22/174 (12%)
Query: 146 RKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYL 205
++ LS E++ P + + HVD + + +L+ +P + Q+ E + L
Sbjct: 191 KQYLSIEKVIWLPKGLFNDETDGHVDNLMHVIAPGKVVLSWTDDPSDPQYQLSREAEKVL 250
Query: 206 GV--------MKIIWLPRGLFGMIHDGEAK----------PRLAGTRLAASYVNFYIANG 247
++I+ LP L G +H E++ R AG RL+ASY NF I NG
Sbjct: 251 SSQTDAKGREIEIVRLP--LPGPLHYSESEAQGIEVSSGMSRAAGERLSASYANFLIVNG 308
Query: 248 GIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
+ P D+ D EA+ VL A P+++++GI RE++LGGGNIHCITQQ PA
Sbjct: 309 YVFLPLLDDRT-DAEAISVLQSAMPEHQIIGIP-TREVLLGGGNIHCITQQIPA 360
>gi|399010092|ref|ZP_10712470.1| agmatine deiminase [Pseudomonas sp. GM17]
gi|398107842|gb|EJL97833.1| agmatine deiminase [Pseudomonas sp. GM17]
Length = 374
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 103/214 (48%), Positives = 141/214 (65%), Gaps = 10/214 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ +P E+E + CW+GWP ER D WR+ A AQ+V+ ++ TAI++ EPV
Sbjct: 5 LDTTPKHDGFRLPGEFETKAGCWLGWP---ERTDVWRNGAKPAQKVWVRIVTAIAQSEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCASAAQ+ NAR LP +RV+EM+ N +WFRD+GP VVN S +V G+D+
Sbjct: 62 TVCASAAQFANARRLLPPQVRVVEMTCNDTWFRDSGPCFVVNDQSG-------EVRGVDF 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG+D G Y W D Q+A KIL E R+ ++ E G I DG+G+ LTTE+C
Sbjct: 115 EFNAYGGLDGGLYYPWDKDDQIASKILEIENFDRYRAPLIAELGGIQSDGQGSLLTTEQC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN+NRN HL K ++ L YLG ++IWLPRG
Sbjct: 175 LLNRNRNQHLGKAEVTRRLTDYLGAEQVIWLPRG 208
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R AGTR+ ASY+N+Y N I+ P FGD+ D A+ L++ FP++ +VGI+ +REI+LG
Sbjct: 294 RQAGTRICASYINYYAGNSAIVVPLFGDRN-DKTALATLAELFPRHRIVGIDNSREILLG 352
Query: 289 GGNIHCITQQQPAIP 303
GGN+ CIT Q A P
Sbjct: 353 GGNVACITMPQYAAP 367
>gi|47092165|ref|ZP_00229957.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|417314097|ref|ZP_12100803.1| agmatine deiminase [Listeria monocytogenes J1816]
gi|47019367|gb|EAL10108.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|328468368|gb|EGF39374.1| agmatine deiminase [Listeria monocytogenes J1816]
Length = 369
Score = 216 bits (551), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 141/218 (64%), Gaps = 12/218 (5%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++ G P G+ MP E+EPH C+M WP ER DNWR AQ+ + +VA AIS FEP
Sbjct: 3 QLKGLPVEDGFRMPGEYEPHIGCFMIWP---ERPDNWRLGGKPAQQNYKEVAVAISNFEP 59
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VT+ S Q++NAR +LP+ IRVIEMS + +W RD GP+ +VN ++ G+D
Sbjct: 60 VTMFVSPNQYKNARKELPDTIRVIEMSNDDAWIRDYGPSFLVNDKG--------EMRGVD 111
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG+ DG Y W D Q+A+K+ ERL + +LEG SIHVDGEGT +TTE
Sbjct: 112 WGFNAWGGLLDGLYFPWDKDNQIAKKVCDIERLDYYSQKDFILEGCSIHVDGEGTLVTTE 171
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
ECLL++ RNP+LTK +IE LK Y V K+IWL G +
Sbjct: 172 ECLLSEGRNPNLTKIEIEQTLKKYFHVQKVIWLKHGFY 209
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR AG RLAASYVN+Y ANG II P F D K D +A +L Q +P ++VGI +AREI+L
Sbjct: 292 PRQAGDRLAASYVNYYTANGAIIFPLFDDPK-DKDAQELLEQLYPDRKIVGI-KAREILL 349
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQ P
Sbjct: 350 GGGNIHCITQHLP 362
>gi|431522752|ref|ZP_19516701.1| agmatine deiminase [Enterococcus faecium E1634]
gi|430584934|gb|ELB23243.1| agmatine deiminase [Enterococcus faecium E1634]
Length = 368
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 112/221 (50%), Positives = 142/221 (64%), Gaps = 20/221 (9%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ +P + MP E+ H +M WP +R DNWRD AQR F +VA AI+ FEPV
Sbjct: 4 IDSSPKKDHFRMPGEFSAHEGVYMLWP---QRPDNWRDGGKPAQRAFVEVARAIANFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ ++ Q++NAR LPE+IRV+E++ N SW RD GPT V N KV G+DW
Sbjct: 61 TMGVNSDQYDNARHMLPEHIRVVEIANNDSWVRDCGPTFVTNSQG--------KVRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTE-----RLPRFPHSMVLEGGSIHVDGEGTCL 177
FN+WGG++DG Y W D QVA+KI E RL F VLEGGSIHVDGEGT +
Sbjct: 113 TFNAWGGLEDGLYFPWDQDDQVAQKICEIEWKDHYRLDNF----VLEGGSIHVDGEGTLI 168
Query: 178 TTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
TTEECLL+K RNP L+K QIEN L YL + K+IWL RG++
Sbjct: 169 TTEECLLSKGRNPQLSKEQIENILGEYLNIDKVIWLKRGIY 209
>gi|424046410|ref|ZP_17783973.1| agmatine deiminase [Vibrio cholerae HENC-03]
gi|408885031|gb|EKM23753.1| agmatine deiminase [Vibrio cholerae HENC-03]
Length = 363
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 141/216 (65%), Gaps = 11/216 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MP E EP S+ WM WP ER DNWR+ A AQ+VFA VA I+K PV
Sbjct: 5 LETTPKQDGFRMPGEHEPQSEIWMAWP---ERTDNWRNGAKPAQKVFADVAKQINKTTPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ SA Q++NA S+LP++IRV+E+S + SW RD G + VVN + G +DW
Sbjct: 62 TMLVSAEQYDNAVSRLPDDIRVLEVSTDDSWMRDIGASYVVNDNGERRG--------VDW 113
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG DG Y W D QVA+K+ R+ ++LEGGSIH+DGEGT TTEEC
Sbjct: 114 EFNAWGGFVDGLYWPWKRDDQVAQKMCEITSDARYRAPIILEGGSIHIDGEGTLYTTEEC 173
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
LL+K+RNP L+K ++ L+ +L V KI+WLPRGL+
Sbjct: 174 LLDKSRNPDLSKEELSKILREHLNVEKIVWLPRGLY 209
>gi|254992269|ref|ZP_05274459.1| agmatine deiminase [Listeria monocytogenes FSL J2-064]
Length = 369
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 141/218 (64%), Gaps = 12/218 (5%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++ G P G+ MP E+EPH C+M WP ER DNWR AQ+ + +VA AIS FEP
Sbjct: 3 QLKGLPVEDGFRMPGEYEPHIGCFMIWP---ERPDNWRLGGKPAQQNYKEVAVAISNFEP 59
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VT+ S Q++NAR +LP+ IRVIEMS + +W RD GP+ +VN ++ G+D
Sbjct: 60 VTMFVSPNQYKNARKELPDTIRVIEMSNDDAWIRDYGPSFLVNDKG--------EMRGVD 111
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG+ DG Y W D Q+A+K+ ERL + +LEG SIHVDGEGT +TTE
Sbjct: 112 WGFNAWGGLLDGLYFPWDKDNQIAKKVCDLERLDYYSQKDFILEGCSIHVDGEGTLVTTE 171
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
ECLL++ RNP+LTK +IE LK Y V K+IWL G +
Sbjct: 172 ECLLSEGRNPNLTKIEIEQTLKKYFHVQKVIWLKHGFY 209
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR AG RLAASYVN+Y ANG II P F D K D +A +L Q +P ++VGI +AREI+L
Sbjct: 292 PRQAGDRLAASYVNYYTANGVIIFPLFDDPK-DKDAQELLEQLYPDRKIVGI-KAREILL 349
Query: 288 GGGNIHCITQQQPAIPT 304
GGGNIHCITQ P T
Sbjct: 350 GGGNIHCITQHLPDKST 366
>gi|46906271|ref|YP_012660.1| agmatine deiminase [Listeria monocytogenes serotype 4b str. F2365]
gi|254824731|ref|ZP_05229732.1| agmatine deiminase [Listeria monocytogenes FSL J1-194]
gi|405751253|ref|YP_006674718.1| agmatine deiminase [Listeria monocytogenes SLCC2378]
gi|424712900|ref|YP_007013615.1| Putative agmatine deiminase 2 [Listeria monocytogenes serotype 4b
str. LL195]
gi|73622157|sp|Q725C4.1|AGUA2_LISMF RecName: Full=Putative agmatine deiminase 2; AltName: Full=Agmatine
iminohydrolase 2
gi|46879535|gb|AAT02837.1| conserved hypothetical protein [Listeria monocytogenes serotype 4b
str. F2365]
gi|293593970|gb|EFG01731.1| agmatine deiminase [Listeria monocytogenes FSL J1-194]
gi|404220453|emb|CBY71816.1| agmatine deiminase [Listeria monocytogenes SLCC2378]
gi|424012084|emb|CCO62624.1| Putative agmatine deiminase 2 [Listeria monocytogenes serotype 4b
str. LL195]
Length = 369
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 141/218 (64%), Gaps = 12/218 (5%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++ G P G+ MP E+EPH C+M WP ER DNWR AQ+ + +VA AIS FEP
Sbjct: 3 QLKGLPVEDGFRMPGEYEPHIGCFMIWP---ERPDNWRLGGKPAQQNYKEVAVAISNFEP 59
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VT+ S Q++NAR +LP+ IRVIEMS + +W RD GP+ +VN ++ G+D
Sbjct: 60 VTMFVSPNQYKNARKELPDTIRVIEMSNDDAWIRDYGPSFLVNDKG--------EMRGVD 111
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG+ DG Y W D Q+A+K+ ERL + +LEG SIHVDGEGT +TTE
Sbjct: 112 WGFNAWGGLLDGLYFPWDKDNQIAKKVCDLERLDYYSQKDFILEGCSIHVDGEGTLVTTE 171
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
ECLL++ RNP+LTK +IE LK Y V K+IWL G +
Sbjct: 172 ECLLSEGRNPNLTKIEIEQTLKKYFHVQKVIWLKHGFY 209
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR AG RLAASYVN+Y ANG II P F D K D +A +L Q +P ++VGI +AREI+L
Sbjct: 292 PRQAGDRLAASYVNYYTANGAIIFPLFDDPK-DKDAQELLEQLYPDRKIVGI-KAREILL 349
Query: 288 GGGNIHCITQQQPAIPT 304
GGGNIHCITQ P T
Sbjct: 350 GGGNIHCITQHLPDKST 366
>gi|254930821|ref|ZP_05264180.1| agmatine deiminase [Listeria monocytogenes HPB2262]
gi|405748383|ref|YP_006671849.1| agmatine deiminase [Listeria monocytogenes ATCC 19117]
gi|417316523|ref|ZP_12103168.1| agmatine deiminase [Listeria monocytogenes J1-220]
gi|424821706|ref|ZP_18246719.1| Putative agmatine deiminase 2 [Listeria monocytogenes str. Scott A]
gi|293582363|gb|EFF94395.1| agmatine deiminase [Listeria monocytogenes HPB2262]
gi|328476179|gb|EGF46885.1| agmatine deiminase [Listeria monocytogenes J1-220]
gi|332310386|gb|EGJ23481.1| Putative agmatine deiminase 2 [Listeria monocytogenes str. Scott A]
gi|404217583|emb|CBY68947.1| agmatine deiminase [Listeria monocytogenes ATCC 19117]
Length = 369
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 142/218 (65%), Gaps = 12/218 (5%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++ G P G+ MP E+EPH C+M WP ER DNWR AQ+ + +VA AIS FEP
Sbjct: 3 QLKGLPVEDGFRMPGEYEPHIGCFMIWP---ERPDNWRLGGKPAQQNYKEVAVAISNFEP 59
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VT+ S Q++NAR +LP+ IRVIEMS + +W RD GP+ +VN ++ G+D
Sbjct: 60 VTMFVSPNQYKNARKELPDTIRVIEMSNDDAWIRDYGPSFLVNDKG--------EMRGVD 111
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHS-MVLEGGSIHVDGEGTCLTTE 180
W FN+WGG+ DG Y W D Q+A+K+ ERL + + +LEG SIHVDGEGT +TTE
Sbjct: 112 WGFNAWGGLLDGLYFPWDKDNQIAKKVCDLERLDYYSQNDFILEGCSIHVDGEGTLVTTE 171
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
ECLL++ RNP+LTK +IE LK Y V K+IWL G +
Sbjct: 172 ECLLSEGRNPNLTKIEIEQTLKKYFHVQKVIWLKHGFY 209
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR AG RLAASYVN+Y ANG II P F D K D +A +L Q +P ++VGI +AREI+L
Sbjct: 292 PRQAGDRLAASYVNYYTANGAIIFPLFDDPK-DKDAQELLEQLYPDRKIVGI-KAREILL 349
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQ P
Sbjct: 350 GGGNIHCITQHLP 362
>gi|347736470|ref|ZP_08869103.1| agmatine deiminase [Azospirillum amazonense Y2]
gi|346920041|gb|EGY01312.1| agmatine deiminase [Azospirillum amazonense Y2]
Length = 328
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/345 (39%), Positives = 176/345 (51%), Gaps = 77/345 (22%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MP EW PH +CWM WP R E N D A A A VA AI++FEPVT+ A + +
Sbjct: 1 MPGEWHPHDRCWMAWPNRAETFPNGLDAARQAY---AAVAKAIAQFEPVTIVAPPGEVAD 57
Query: 74 AR---SQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
A S P + VI + ++ SW RD GP+ V++ + G+DW+FN+WG
Sbjct: 58 ASILCSGAP--VSVIPVPLSDSWIRDNGPSFVIDGKGG--------IGGVDWDFNAWGR- 106
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
Y D+ D QVA +IL +PRF +V+EGGS HVDGEGT +TTEECLLN NRNP
Sbjct: 107 ---NYDDFGADTQVAAEILKGLDVPRFKAPLVMEGGSFHVDGEGTLITTEECLLNPNRNP 163
Query: 191 HLTKGQIENELKAYLGVMKIIWLPRG---------------------LFGMIHDGEAKPR 229
LT+G+IE L+ +LGV +IIWL RG + M D P
Sbjct: 164 GLTRGEIEGHLRDFLGVRQIIWLGRGYEQDETDGHIDEIACFIRPGLVLAMTTDDPDDPN 223
Query: 230 L----------------------------------AGTRLAASYVNFYIANGGIITPQFG 255
AG RL SY NFY+ANGG++ P F
Sbjct: 224 FDTFQDNIERLSMATDAQGRELDIVTLRTPARQEQAGVRLTLSYTNFYLANGGVVLPAFE 283
Query: 256 DKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
D D EA ++ S+ +P ++ + A +IV GGG IHCITQQQP
Sbjct: 284 DPM-DAEAAKLFSRLYPDRQIAQVP-ALDIVRGGGGIHCITQQQP 326
>gi|405754125|ref|YP_006677589.1| agmatine deiminase [Listeria monocytogenes SLCC2540]
gi|404223325|emb|CBY74687.1| agmatine deiminase [Listeria monocytogenes SLCC2540]
Length = 369
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 141/218 (64%), Gaps = 12/218 (5%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++ G P G+ MP E+EPH C+M WP ER DNWR AQ+ + +VA AIS FEP
Sbjct: 3 QLKGLPVEDGFRMPGEYEPHIGCFMIWP---ERPDNWRLGGKPAQQNYKEVAVAISNFEP 59
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VT+ S Q++NAR +LP+ IRVIEMS + +W RD GP+ +VN ++ G+D
Sbjct: 60 VTMFVSPNQYKNARKELPDTIRVIEMSNDDAWIRDYGPSFLVNDKG--------EMRGVD 111
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG+ DG Y W D Q+A+K+ ERL + +LEG SIHVDGEGT +TTE
Sbjct: 112 WGFNAWGGLLDGLYFPWDKDNQIAKKVCDLERLDYYSQKDFILEGCSIHVDGEGTLVTTE 171
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
ECLL++ RNP+LTK +IE LK Y V K+IWL G +
Sbjct: 172 ECLLSEGRNPNLTKIEIEQTLKKYFHVQKVIWLKHGFY 209
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR AG RLAASYVN+Y ANG II P F D K D +A +L Q +P ++VGI +AREI+L
Sbjct: 292 PRQAGDRLAASYVNYYTANGAIIFPLFDDPK-DKDAQELLEQLYPDRKIVGI-KAREILL 349
Query: 288 GGGNIHCITQQQPAIPT 304
GGGNIHCITQ P T
Sbjct: 350 GGGNIHCITQHLPDKST 366
>gi|315295273|ref|ZP_07872227.1| agmatine deiminase [Listeria ivanovii FSL F6-596]
gi|313630803|gb|EFR98535.1| agmatine deiminase [Listeria ivanovii FSL F6-596]
Length = 369
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 143/218 (65%), Gaps = 12/218 (5%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
+ NG P G+ MP E+EPH C+M WP ER DNWR AQ+ + VA AIS++EP
Sbjct: 3 QRNGLPIEDGFRMPGEYEPHVGCFMIWP---ERPDNWRLGGKPAQQNYKDVAIAISEYEP 59
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VT+ S Q++NAR++LP+ IRVIEMS + +W RD GP+ ++N A + G++
Sbjct: 60 VTMFVSGNQYKNARNELPDAIRVIEMSNDDAWIRDYGPSFLINDKGA--------MRGVN 111
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG+ DG Y W D Q+A+KI E++ + P + +LEG SIHVDGEGT +TTE
Sbjct: 112 WGFNAWGGLLDGLYFPWDKDDQMAKKICDLEQIDYYSPENFILEGCSIHVDGEGTLVTTE 171
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
ECLL++ RNP LTK +IE LK Y V KIIWL G +
Sbjct: 172 ECLLSEGRNPKLTKAEIEGTLKKYFNVEKIIWLKHGFY 209
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR AG RLAASYVN+Y ANG II P F D K D +A +L + +P E++GI +AREI+L
Sbjct: 292 PRQAGDRLAASYVNYYTANGAIIFPLFDDPK-DKDASELLGKLYPDREIIGI-KAREILL 349
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQ P
Sbjct: 350 GGGNIHCITQHIP 362
>gi|430840602|ref|ZP_19458526.1| agmatine deiminase [Enterococcus faecium E1007]
gi|431742019|ref|ZP_19530918.1| agmatine deiminase [Enterococcus faecium E2039]
gi|430495089|gb|ELA71305.1| agmatine deiminase [Enterococcus faecium E1007]
gi|430600867|gb|ELB38494.1| agmatine deiminase [Enterococcus faecium E2039]
Length = 368
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 141/217 (64%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ +P + MP E+ H +M WP +R DNWRD AQR F +VA AI+ FEPV
Sbjct: 4 IDSSPKKDHFRMPGEFSVHEGVYMLWP---QRPDNWRDGGKPAQRAFVEVARAIANFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ ++ Q++NAR LPE+IRV+E++ N SW RD GPT V N KV G+DW
Sbjct: 61 TMGVNSDQYDNARHMLPEHIRVVEIASNDSWVRDCGPTFVTNSQG--------KVRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG++DG Y W D QVA+KI E R+ + VLEGGSIHVDGEGT +TTEE
Sbjct: 113 TFNAWGGLEDGLYFPWDQDDQVAQKICEIEWKDRYRLDNFVLEGGSIHVDGEGTLITTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+K RNP L+K QIEN L YL + K+IWL G++
Sbjct: 173 CLLSKGRNPQLSKEQIENILGEYLNIEKVIWLKHGIY 209
>gi|403382415|ref|ZP_10924472.1| agmatine deiminase [Paenibacillus sp. JC66]
Length = 349
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 185/359 (51%), Gaps = 76/359 (21%)
Query: 8 ALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCAS 67
+LH Y MPAEW H + + WP++ + +D +A++ AI++FEPVTV +
Sbjct: 5 SLH-YRMPAEWTEHERTLISWPIQDSMC--YPEDYHTVCEGYAQLIKAIAEFEPVTVLVN 61
Query: 68 AAQWENARSQL---PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
+ + + + V++++ N +W RD GPT ++N+ AGI+W F
Sbjct: 62 EEDDQQVKERFGGTNHEVEVLKIAHNDAWLRDNGPTYLLNEQGER--------AGINWKF 113
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL 184
N+WGG Y W LD +VA K+L T R RF +V+EGGSIHVDGEGT LTTEECLL
Sbjct: 114 NAWGGK----YTPWDLDDEVAVKVLETRREQRFDAPLVMEGGSIHVDGEGTLLTTEECLL 169
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG-------------------- 224
N NRNP +++ QIE+ L++YL + +IIWLPRGL G DG
Sbjct: 170 NPNRNPAMSREQIEDVLRSYLDIEQIIWLPRGLSGDETDGHVDNVACFAAPGKVLLQVCH 229
Query: 225 ---------------------EAKPR--------------LAGTRLAASYVNFYIANGGI 249
+AK R + G RL SY+NFY NGGI
Sbjct: 230 DPEDENYGITQEHLSVLKAAKDAKGRTLDIIEIEQPPKVEMNGKRLTLSYLNFYFVNGGI 289
Query: 250 ITPQFGDK--KWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIPTNA 306
I P FG + D +A ++LS+ FP + I+ I+ GGN+HC TQQ PA+ + +
Sbjct: 290 ILPVFGGSAAETDKKAEQILSETFPDRRIRTID-GMAIIKEGGNVHCTTQQVPAVRSTS 347
>gi|92113316|ref|YP_573244.1| peptidyl-arginine deiminase [Chromohalobacter salexigens DSM 3043]
gi|91796406|gb|ABE58545.1| agmatine deiminase [Chromohalobacter salexigens DSM 3043]
Length = 373
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/214 (48%), Positives = 141/214 (65%), Gaps = 10/214 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ P G+ +P E+EP + CW+GWP ER D WR+ AQRV+ ++A+AI++ EPV
Sbjct: 5 LTSLPKADGFRLPGEFEPKAGCWLGWP---ERPDVWRNGGKPAQRVWVEIASAIAESEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCASAAQ+ NAR LP ++RV+EM+ N SWFRD+GP VVN ++ +V G+D
Sbjct: 62 TVCASAAQFANARRLLPPSVRVVEMTCNDSWFRDSGPAFVVNDATG-------EVRGVDL 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG+D G Y W D +ARK+L E L R+ + E G I DG+GT LTTE+C
Sbjct: 115 EFNAYGGLDGGLYFPWDQDDLIARKVLEIEGLDRYRAPFIAEMGGIQSDGQGTLLTTEQC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN+NRN HL K + L+ YLG ++IWLPRG
Sbjct: 175 LLNRNRNGHLGKQAVTRHLEDYLGAERVIWLPRG 208
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R AGTR+ ASY+N+Y N I+ P FGD D A L++ FP++ +VGIE +REI+LG
Sbjct: 294 RQAGTRICASYINYYAGNSVIVVPLFGDPS-DRVAQATLAELFPRHRIVGIESSREILLG 352
Query: 289 GGNIHCITQQQPAIPT 304
GGN+ CIT Q A PT
Sbjct: 353 GGNVACITMPQYAAPT 368
>gi|296386784|ref|ZP_06876283.1| agmatine deiminase [Pseudomonas aeruginosa PAb1]
Length = 185
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 130/190 (68%), Gaps = 13/190 (6%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEWEPH Q WM WP ER DNWR+ AQ F VA AI++FEPVTVC
Sbjct: 7 TPRADGFRMPAEWEPHEQTWMVWP---ERPDNWRNGGKPAQAAFTAVAKAIARFEPVTVC 63
Query: 66 ASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
ASA Q+ENAR++L + NIRV+E+S + +W RDTGPT V++ V G+DW F
Sbjct: 64 ASAGQYENARARLDDGNIRVVEISSDDAWVRDTGPTFVIDDKG--------DVRGVDWGF 115
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECL 183
N+WGG + G Y W D QVARKIL ER R+ VLEGGSIHVDGEGT +TTEECL
Sbjct: 116 NAWGGFEGGLYFPWQRDDQVARKILEIERRARYRTDDFVLEGGSIHVDGEGTLITTEECL 175
Query: 184 LNKNRNPHLT 193
LN NRNPHL+
Sbjct: 176 LNHNRNPHLS 185
>gi|422810932|ref|ZP_16859343.1| agmatine deiminase [Listeria monocytogenes FSL J1-208]
gi|378751137|gb|EHY61728.1| agmatine deiminase [Listeria monocytogenes FSL J1-208]
Length = 369
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/218 (48%), Positives = 140/218 (64%), Gaps = 12/218 (5%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++ G P G+ MP E+EPH C+M WP ER DNWR AQ+ + +VA AIS FEP
Sbjct: 3 QLKGLPVEDGFRMPGEYEPHIGCFMIWP---ERPDNWRLGGKPAQQNYKEVAVAISNFEP 59
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VT+ S Q++NAR +LP+ IRVIEMS + +W RD GP+ +VN + G+D
Sbjct: 60 VTMFVSPNQYKNARKELPDTIRVIEMSNDDAWIRDYGPSFLVNDKG--------DMRGVD 111
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG+ DG Y W D Q+A+K+ ER+ + +LEG SIHVDGEGT +TTE
Sbjct: 112 WGFNAWGGLLDGLYFPWDKDNQIAKKVCDLERIDYYSQKDFILEGCSIHVDGEGTLVTTE 171
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
ECLL++ RNP+LTK +IE LK Y V K+IWL G +
Sbjct: 172 ECLLSEGRNPNLTKIEIEQTLKKYFHVQKVIWLKHGFY 209
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR AG RLAASYVN+Y ANG II P F D K D +A +L + +P +VVGI +AREI+L
Sbjct: 292 PRQAGDRLAASYVNYYTANGAIIFPLFDDPK-DKDAQELLEKLYPDRKVVGI-KAREILL 349
Query: 288 GGGNIHCITQQQPAIPT 304
GGGNIHCITQ P T
Sbjct: 350 GGGNIHCITQHLPDKST 366
>gi|400290986|ref|ZP_10793013.1| agmatine deiminase [Streptococcus ratti FA-1 = DSM 20564]
gi|399921777|gb|EJN94594.1| agmatine deiminase [Streptococcus ratti FA-1 = DSM 20564]
Length = 369
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 146/376 (38%), Positives = 186/376 (49%), Gaps = 90/376 (23%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N TP G+ MP E+E Q WM WP R DNWR A AQ+ F +VA AISKFEPV+
Sbjct: 7 NSTPKQDGFRMPGEFEKQKQIWMLWPWRN---DNWRLGAKPAQKAFLEVAEAISKFEPVS 63
Query: 64 VCASAAQWENARSQLPE----NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
+C Q+ENA +++ E NIRVIEM+ + SW RD GPT +VN +
Sbjct: 64 LCVPPLQYENAVARVSELENNNIRVIEMTNDDSWIRDCGPTFLVNDRG--------DLRA 115
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLT 178
+DW FN+WGG+ DG Y W D VARK+ E + + VLEGGSIHVDGEGT L
Sbjct: 116 VDWEFNAWGGLVDGLYFPWDQDALVARKVCEIEGVDSYKTKDFVLEGGSIHVDGEGTVLV 175
Query: 179 TE--------------ECLLNKNRN---------------PHLTKGQIEN---------- 199
TE E + NK +N P+ T G I++
Sbjct: 176 TEMCLLHPSRNPHMSKEDIENKLKNYLNCEKVLWVKDGIDPYETNGHIDDVACFIRPGEV 235
Query: 200 --------------ELKA--------------YLGVMKIIWLPRGLF----GMIHDGEAK 227
E KA +L V K+ + + I GE
Sbjct: 236 ACIYTDDKNHPFYREAKAAYDFLSEQTDAKGRHLKVHKMCVTKKPCYLKAADTIDYGEGS 295
Query: 228 -PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIV 286
PR G ASY+NF I NGG+I PQ+GD+ D AV+ + + FP ++VG+ R EI
Sbjct: 296 IPREEGEIAIASYLNFLIVNGGVILPQYGDEN-DQLAVQQVKEMFPDRKIVGV-RTEEIA 353
Query: 287 LGGGNIHCITQQQPAI 302
GGGNIHCITQQ+PAI
Sbjct: 354 YGGGNIHCITQQEPAI 369
>gi|422630156|ref|ZP_16695356.1| agmatine deiminase, partial [Pseudomonas syringae pv. pisi str.
1704B]
gi|330939458|gb|EGH42813.1| agmatine deiminase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 344
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 112/202 (55%), Positives = 135/202 (66%), Gaps = 13/202 (6%)
Query: 25 WMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLP-ENIR 83
WM WP ER DNWR AQ +A AI++FEPVTV SAAQ++NAR++L NIR
Sbjct: 2 WMVWP---ERPDNWRLGGKPAQAAHVAIAKAIARFEPVTVAVSAAQYDNARARLDMPNIR 58
Query: 84 VIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDLQ 143
V+EMS N +W RD+GPT V+N +V G++W FN+WGG D G Y W+LD Q
Sbjct: 59 VVEMSSNDAWVRDSGPTFVINDRG--------EVRGVNWEFNAWGGFDGGLYAPWNLDSQ 110
Query: 144 VARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELK 202
+ K+L ER PR+ VLEGGSIHVDGEGT +TTEECLLN+NRNPHLT+ QIE L
Sbjct: 111 LGSKVLEIERCPRYVTEGFVLEGGSIHVDGEGTLITTEECLLNRNRNPHLTREQIETILG 170
Query: 203 AYLGVMKIIWLPRGLFGMIHDG 224
YL V K+IWLP GLF DG
Sbjct: 171 DYLAVDKVIWLPDGLFNDETDG 192
>gi|226222685|ref|YP_002756792.1| hypothetical protein Lm4b_00049 [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|386730809|ref|YP_006204305.1| agmatine deiminase [Listeria monocytogenes 07PF0776]
gi|406702823|ref|YP_006753177.1| agmatine deiminase [Listeria monocytogenes L312]
gi|225875147|emb|CAS03839.1| unnamed protein product [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|384389567|gb|AFH78637.1| agmatine deiminase [Listeria monocytogenes 07PF0776]
gi|406359853|emb|CBY66126.1| agmatine deiminase [Listeria monocytogenes L312]
Length = 369
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/218 (48%), Positives = 140/218 (64%), Gaps = 12/218 (5%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++ G P G+ MP E+EPH C+M WP ER DNWR AQ+ + +VA AIS FEP
Sbjct: 3 QLKGLPVEDGFRMPGEYEPHIGCFMIWP---ERPDNWRLGGKPAQQNYKEVAVAISNFEP 59
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VT+ S Q++NAR +LP+ IRVIEMS + +W RD GP+ +VN ++ G+D
Sbjct: 60 VTMFVSPNQYKNARKELPDTIRVIEMSNDDAWIRDYGPSFLVNDKG--------EMRGVD 111
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG+ DG Y W D Q+A+K+ ERL + +LEG SIHVDGEGT +TTE
Sbjct: 112 WGFNAWGGLLDGLYFPWDKDNQIAKKVCDLERLDYYSQKDFILEGCSIHVDGEGTLVTTE 171
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
ECLL++ RNP+LTK +IE LK Y K+IWL G +
Sbjct: 172 ECLLSEGRNPNLTKIEIEQTLKKYFHAQKVIWLKHGFY 209
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR AG RLAASYVN+Y ANG II P F D K D +A +L Q +P ++VGI +AREI+L
Sbjct: 292 PRQAGDRLAASYVNYYTANGAIIFPLFDDPK-DKDAQELLEQLYPDRKIVGI-KAREILL 349
Query: 288 GGGNIHCITQQQPAIPT 304
GGGNIHCITQ P T
Sbjct: 350 GGGNIHCITQHLPDKST 366
>gi|254851794|ref|ZP_05241142.1| agmatine deiminase [Listeria monocytogenes FSL R2-503]
gi|300765690|ref|ZP_07075667.1| porphyromonas-type peptidyl-arginine deiminase superfamily protein
[Listeria monocytogenes FSL N1-017]
gi|404279597|ref|YP_006680495.1| agmatine deiminase [Listeria monocytogenes SLCC2755]
gi|404285412|ref|YP_006691998.1| agmatine deiminase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|258605087|gb|EEW17695.1| agmatine deiminase [Listeria monocytogenes FSL R2-503]
gi|300513563|gb|EFK40633.1| porphyromonas-type peptidyl-arginine deiminase superfamily protein
[Listeria monocytogenes FSL N1-017]
gi|404226232|emb|CBY47637.1| agmatine deiminase [Listeria monocytogenes SLCC2755]
gi|404244341|emb|CBY02566.1| agmatine deiminase [Listeria monocytogenes serotype 7 str.
SLCC2482]
Length = 369
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/218 (48%), Positives = 140/218 (64%), Gaps = 12/218 (5%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++ G P G+ MP E+EPH C+M WP ER DNWR AQ+ + +VA AIS FEP
Sbjct: 3 QLKGLPVEDGFRMPGEYEPHIGCFMIWP---ERPDNWRLGGKPAQQNYKEVAVAISNFEP 59
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VT+ S Q++NAR +LP+ IRVIEMS + +W RD GP+ +VN ++ G+D
Sbjct: 60 VTMFVSPNQYKNARKELPDTIRVIEMSNDDAWIRDYGPSFLVNDKG--------EMRGVD 111
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG+ DG Y W D Q+A+K+ ERL + +LEG SIHVDGEGT +TTE
Sbjct: 112 WGFNAWGGLLDGLYFPWDKDNQIAKKVCDLERLDYYSQKDFILEGCSIHVDGEGTLVTTE 171
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
ECLL++ RNP+LTK +IE LK Y K+IWL G +
Sbjct: 172 ECLLSEGRNPNLTKIEIEQTLKKYFHAQKVIWLKHGFY 209
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR AG RLAASYVN+Y ANG II P F D K D +A +L Q +P ++VGI +AREI+L
Sbjct: 292 PRQAGDRLAASYVNYYTANGAIIFPLFDDPK-DKDAQELLEQLYPDRKIVGI-KAREILL 349
Query: 288 GGGNIHCITQQQPAIPT 304
GGGNIHCITQ P T
Sbjct: 350 GGGNIHCITQHLPDKST 366
>gi|407790353|ref|ZP_11137448.1| agmatine deiminase [Gallaecimonas xiamenensis 3-C-1]
gi|407204975|gb|EKE74954.1| agmatine deiminase [Gallaecimonas xiamenensis 3-C-1]
Length = 363
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 137/218 (62%), Gaps = 11/218 (5%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
E++ PA G+ MPAE+EP WM WP ER DNWR A AQR F +VA AIS+
Sbjct: 3 FEVSSLPAADGFRMPAEFEPQDGVWMAWP---ERSDNWRFGAKPAQRAFTEVAKAISQTT 59
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
PVT+ S++Q+ NAR QLP IRV+EM+ + +W RDTGPT +VN G +
Sbjct: 60 PVTMVVSSSQYANARRQLPPQIRVVEMTTDDAWLRDTGPTYLVNDLGVRRG--------V 111
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DW FN+WGG+ G Y W D VARK+ + +V+EGG+IHVDGEGT TTE
Sbjct: 112 DWQFNAWGGLHYGLYFPWHNDNAVARKVCEIYGDSVYKAPIVMEGGAIHVDGEGTLYTTE 171
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
ECLL+ RNP L K ++E LK YL + K++WLPRG+F
Sbjct: 172 ECLLSPGRNPGLGKDELEKLLKDYLSIEKVVWLPRGVF 209
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R G RLA SY NF I N ++ P D D + L+ FP Y + G+ AREI+LG
Sbjct: 292 REGGARLAGSYANFLITNKQVVFPLL-DPAKDEQVAAQLADLFPGYLITGV-NAREILLG 349
Query: 289 GGNIHCITQQQPAI 302
GGNIHCITQQ P I
Sbjct: 350 GGNIHCITQQIPRI 363
>gi|167630389|ref|YP_001680888.1| agmatine deiminase [Heliobacterium modesticaldum Ice1]
gi|167593129|gb|ABZ84877.1| agmatine deiminase. putative [Heliobacterium modesticaldum Ice1]
Length = 338
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 130/351 (37%), Positives = 180/351 (51%), Gaps = 74/351 (21%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
P G+ MP EW PH + ++ WP+ W D+ ++ +A+VA AI++FEPVT+
Sbjct: 4 PQASGFAMPPEWAPHQRTFIVWPIDDT---TWPDELDEVRQAYARVAQAIARFEPVTMVV 60
Query: 67 SAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
E A ++ ++ M + SW RD+GPT + N + ++AG++W FN+
Sbjct: 61 LPELVEEAARICGPSVDILPMEYDDSWIRDSGPTFLKNAAG--------ELAGVNWQFNA 112
Query: 127 WGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNK 186
WG LD VA ++L + RF VLEGGSIHVDGEGT LTTEECLLNK
Sbjct: 113 WGNKFPS-----ELDNLVAPQLLDHFGIRRFDAPFVLEGGSIHVDGEGTLLTTEECLLNK 167
Query: 187 NRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEA-------------------- 226
NRNPH+T+ +++ +++ YLGV KIIWL +GL G DG
Sbjct: 168 NRNPHMTREELDAQVRQYLGVEKIIWLKKGLCGDHTDGHVDNVACFARPGVVLLQVCSDP 227
Query: 227 -KPRLAGTR----------------------------------LAASYVNFYIANGGIIT 251
P A +R +AASY+NFY NGGII
Sbjct: 228 EDPNYAISRENLEILRQAVDAKGRSLEIIPIEQPPALYHKGVRMAASYINFYFVNGGIIL 287
Query: 252 PQFGDK--KWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
P FG + + D +A +L++ FP +V IE +R I+ GGGNIHC TQQ P
Sbjct: 288 PIFGGECAETDRQAEAILARVFPDRTIVPIE-SRIILTGGGNIHCATQQMP 337
>gi|228879518|ref|YP_394681.2| agmatine deiminase [Lactobacillus sakei subsp. sakei 23K]
gi|73622163|sp|Q8RPX2.1|AGUA_LACSS RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|19773589|gb|AAL98713.1|AF349639_3 LabD [Lactobacillus sakei subsp. sakei 23K]
Length = 365
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 137/217 (63%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ +P GY MP E+E H ++ WP ER DNWR+ A AQ FAKVA I++FE V
Sbjct: 4 LQTSPKKDGYRMPGEFEAHKDVYLLWP---ERPDNWREGAKPAQATFAKVAETIAQFESV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV S Q+ NAR L +NI+V+EMS N SW RD GPT VVN S G+DW
Sbjct: 61 TVGVSDRQYTNARHMLADNIQVVEMSNNDSWIRDCGPTFVVNDKGDSR--------GVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG+ DG Y W D +VA+K+ E R+ +VLEGGS HVDGEGT L TEE
Sbjct: 113 TFNAWGGLVDGLYFPWDKDDRVAQKVCEIEGRDRYRLDDLVLEGGSTHVDGEGTLLVTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP L+K QIE+ LK YL V KIIWL +G++
Sbjct: 173 CLLSDGRNPQLSKEQIESILKEYLNVEKIIWLKKGIY 209
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PRLAG RLAASYVN+Y ANGGI+ P F D D +A +L + +P ++VG+ AREI+L
Sbjct: 292 PRLAGDRLAASYVNYYTANGGIVFPLFND-PMDEKAQEILQKLYPDRKIVGVP-AREILL 349
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQ PA
Sbjct: 350 GGGNIHCITQQIPA 363
>gi|425059291|ref|ZP_18462639.1| agmatine deiminase [Enterococcus faecium 504]
gi|403035893|gb|EJY47271.1| agmatine deiminase [Enterococcus faecium 504]
Length = 359
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 108/206 (52%), Positives = 137/206 (66%), Gaps = 12/206 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MP E+ H +M WP +R DNWRD AQR F +VA AI+ FEPVT+ ++ Q++N
Sbjct: 1 MPGEFSAHEGVYMLWP---QRPDNWRDGGKPAQRAFVEVARAIANFEPVTMGVNSDQYDN 57
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
AR LPE+IRV+E++ N SW RD GPT V N KV G+DW FN+WGG++DG
Sbjct: 58 ARHMLPEHIRVVEIANNDSWVRDCGPTFVTNSQG--------KVRGVDWTFNAWGGLEDG 109
Query: 134 CYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
Y W D QVA+KI E R+ + VLEGGSIH+DGEGT +TTEECLL+K RNP L
Sbjct: 110 LYFPWDQDDQVAQKICEIEWKDRYRLDNFVLEGGSIHIDGEGTLITTEECLLSKGRNPQL 169
Query: 193 TKGQIENELKAYLGVMKIIWLPRGLF 218
+K QIEN L YL + K+IWL RG++
Sbjct: 170 SKEQIENILGEYLNIDKVIWLKRGIY 195
>gi|170721033|ref|YP_001748721.1| agmatine deiminase [Pseudomonas putida W619]
gi|169759036|gb|ACA72352.1| agmatine deiminase [Pseudomonas putida W619]
Length = 369
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/214 (48%), Positives = 142/214 (66%), Gaps = 10/214 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ +P E+E + CW+GWP ER D WR+ AQ+V+ ++ATAI+ EPV
Sbjct: 5 LTTTPKGDGFRLPGEFEHKAGCWLGWP---ERPDVWRNGGKPAQKVWVEIATAIASSEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCASAAQ+ NAR LP +RV+EM+ N +WFRD+G VVN SS +V G+D+
Sbjct: 62 TVCASAAQYANARRLLPAQVRVVEMTCNDTWFRDSGACFVVNDSSG-------EVRGVDF 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG+D G Y W D Q+A+KIL E L R+ ++ E G I DG+G+ LTTE+C
Sbjct: 115 EFNAYGGLDGGLYYPWDKDDQIAQKILEIEGLDRYRAPLIAELGGIQSDGQGSLLTTEQC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN+NRN HL K ++ L+ YLG ++IWLPRG
Sbjct: 175 LLNRNRNAHLGKDEVTRRLEDYLGADQVIWLPRG 208
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R AGTR+ ASY+N+Y N I+ P FGD+ D A L++ FP + ++GI+ +REI+LG
Sbjct: 294 REAGTRICASYINYYAGNTAIVVPLFGDRN-DSVAQATLAELFPGHRIIGIDNSREILLG 352
Query: 289 GGNIHCITQQQPA 301
GGN+ CIT Q A
Sbjct: 353 GGNVACITMPQYA 365
>gi|78609323|emb|CAI54369.1| Putative peptidylarginine deiminase (Amidinotransferase)
[Lactobacillus sakei subsp. sakei 23K]
Length = 375
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 137/217 (63%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ +P GY MP E+E H ++ WP ER DNWR+ A AQ FAKVA I++FE V
Sbjct: 14 LQTSPKKDGYRMPGEFEAHKDVYLLWP---ERPDNWREGAKPAQATFAKVAETIAQFESV 70
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV S Q+ NAR L +NI+V+EMS N SW RD GPT VVN S G+DW
Sbjct: 71 TVGVSDRQYTNARHMLADNIQVVEMSNNDSWIRDCGPTFVVNDKGDSR--------GVDW 122
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG+ DG Y W D +VA+K+ E R+ +VLEGGS HVDGEGT L TEE
Sbjct: 123 TFNAWGGLVDGLYFPWDKDDRVAQKVCEIEGRDRYRLDDLVLEGGSTHVDGEGTLLVTEE 182
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP L+K QIE+ LK YL V KIIWL +G++
Sbjct: 183 CLLSDGRNPQLSKEQIESILKEYLNVEKIIWLKKGIY 219
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PRLAG RLAASYVN+Y ANGGI+ P F D D +A +L + +P ++VG+ AREI+L
Sbjct: 302 PRLAGDRLAASYVNYYTANGGIVFPLFND-PMDEKAQEILQKLYPDRKIVGVP-AREILL 359
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQ PA
Sbjct: 360 GGGNIHCITQQIPA 373
>gi|325273441|ref|ZP_08139690.1| agmatine deiminase [Pseudomonas sp. TJI-51]
gi|324101418|gb|EGB99015.1| agmatine deiminase [Pseudomonas sp. TJI-51]
Length = 343
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 102/214 (47%), Positives = 142/214 (66%), Gaps = 10/214 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ +P E+E ++CW+GWP ER D WR+ A AQ+V+ + +AI+ EPV
Sbjct: 5 LTTTPKADGFRLPGEFERKARCWLGWP---ERPDVWRNGAKPAQKVWVDIVSAIASSEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVCASAAQ+ NAR LP +RV+EM+ N +WFRD+G VVN SS +V G+D+
Sbjct: 62 TVCASAAQYANARRMLPPQVRVVEMTCNDTWFRDSGACFVVNDSSG-------EVRGVDF 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN++GG+D G Y W D Q+A+K+L E L R+ ++ E G I DG+G+ LTTE+C
Sbjct: 115 EFNAYGGLDGGLYYPWDKDDQIAQKMLEIEGLDRYRAPLIAELGGIQSDGQGSLLTTEQC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
LLN+NRN HL K ++ L+ YLG ++IWLPRG
Sbjct: 175 LLNRNRNAHLGKAEVTRRLEDYLGADQVIWLPRG 208
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGI 279
R AGTR+ ASY+N+Y N I+ P FGD+ D A L++ FP++ ++GI
Sbjct: 294 REAGTRICASYINYYAGNSAIVVPLFGDRN-DSVAQATLAELFPEHRIIGI 343
>gi|452825638|gb|EME32633.1| agmatine deiminase [Galdieria sulphuraria]
Length = 440
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 145/216 (67%), Gaps = 10/216 (4%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP GY+ PAEW H QC++GWP + WR+ + AQR A++A AIS+FEPVTV
Sbjct: 79 TPKKDGYIFPAEWSSHKQCFIGWP---DVAPKWREGGIPAQRAIAEIAKAISQFEPVTVV 135
Query: 66 AS-AAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVA-GIDWN 123
AS W+ ARS+LP++IRVI++ N W RD+GP V S+ + ++A G+ +N
Sbjct: 136 ASNPTGWKAARSRLPQSIRVIQIPNNDCWLRDSGPIFV-----KSTNHEVEELARGVVFN 190
Query: 124 FNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECL 183
F +WGG + Y DWSLD Q A +L E + ++ MVLEGGSI VDG+GT +TTEECL
Sbjct: 191 FTAWGGPTEPAYGDWSLDSQFAENLLQVENVSQYYAGMVLEGGSISVDGQGTLVTTEECL 250
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
LN NRNP ++K +IE+ L+ +LG+ K+IWLP G++G
Sbjct: 251 LNPNRNPSMSKEEIEHRLQEFLGIKKVIWLPYGVYG 286
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 54/84 (64%), Gaps = 6/84 (7%)
Query: 220 MIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGI 279
+ DG K R AG RL ASYVNFY+ NGG++ P+F D A + L +AFP +V +
Sbjct: 359 FLFDG-CKLRPAGQRLPASYVNFYVTNGGVVAPKFNHPN-DELAKKTLEEAFPGRRIVQV 416
Query: 280 ERAREIVLGG---GNIHCITQQQP 300
ARE++LGG G IHC+TQQQP
Sbjct: 417 -YAREVLLGGGCLGCIHCMTQQQP 439
>gi|253686560|ref|YP_003015750.1| agmatine deiminase [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|251753138|gb|ACT11214.1| agmatine deiminase [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 367
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 137/219 (62%), Gaps = 11/219 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEW PH WM WP R DNWR+ + AQ+ FA+VA AI++ PV +
Sbjct: 11 TPHQDGFAMPAEWAPHDAVWMIWPYR---TDNWREQGIPAQKTFARVAEAIAQNTPVIMG 67
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A NA+ +P N+ ++EM + +W RDTGPTIV+N QA + GIDW FN
Sbjct: 68 VPARYMANAQQVMPVNVTLVEMESDDAWMRDTGPTIVLN--------QAGERRGIDWQFN 119
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WGG G Y DW D +VA ++L + R+ ++LEGGSIHVDGEGT LTT ECLLN
Sbjct: 120 AWGGELGGLYEDWRQDEKVAAQVLDYHQAGRYAAPLILEGGSIHVDGEGTLLTTAECLLN 179
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
NRNPHL+K +IE ++ YL + IIWL G++ DG
Sbjct: 180 PNRNPHLSKAEIEQLMRDYLSISTIIWLEEGVYNDETDG 218
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ G+A RLAG+RLA SYVNF I+N II P D+K D A +L Q FP Y + G+
Sbjct: 287 VDSGDAVERLAGSRLAGSYVNFLISNQQIIFPLL-DEKTDDVARDLLQQMFPGYLISGVP 345
Query: 281 RAREIVLGGGNIHCITQQQPAI 302
AREI+LGGGNIHCITQQ PA+
Sbjct: 346 -AREILLGGGNIHCITQQIPAV 366
>gi|331700696|ref|YP_004397655.1| Agmatine deiminase [Lactobacillus buchneri NRRL B-30929]
gi|406026204|ref|YP_006725036.1| agmatine deiminase [Lactobacillus buchneri CD034]
gi|329128039|gb|AEB72592.1| Agmatine deiminase [Lactobacillus buchneri NRRL B-30929]
gi|405124693|gb|AFR99453.1| agmatine deiminase [Lactobacillus buchneri CD034]
Length = 365
Score = 213 bits (542), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 108/217 (49%), Positives = 137/217 (63%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ +P GY MP E+E H ++ WP ER DNWR+ A AQ F VA AIS+FE V
Sbjct: 4 LQSSPKKDGYRMPGEFEHHKGVYILWP---ERPDNWRNGAKPAQHTFVNVAKAISQFEHV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV S AQ+ NAR LP+ + V+E+S + SW RD GPT VVN + G+DW
Sbjct: 61 TVGVSDAQYANARHMLPDEVEVVEISSDDSWIRDCGPTFVVNDDG--------DLRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG+ DG Y W D +VA+K+ E R+ +LEGGSIHVDGEGT +TTEE
Sbjct: 113 TFNAWGGLVDGLYFPWDKDDRVAQKVTEMEHADRYRLDDFILEGGSIHVDGEGTLITTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+K RN L+K QIEN LK YL + K+IWL RG++
Sbjct: 173 CLLSKGRNSQLSKEQIENVLKEYLNLDKVIWLKRGIY 209
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G RLAASYVN+Y ANGGI+ P F D D +A L + +P ++VG+ AREI+L
Sbjct: 292 PRREGDRLAASYVNYYTANGGIVFPTFDDPN-DAKAQETLQRLYPDRKIVGVP-AREILL 349
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQ PA
Sbjct: 350 GGGNIHCITQQVPA 363
>gi|254827471|ref|ZP_05232158.1| agmatine deiminase [Listeria monocytogenes FSL N3-165]
gi|255025484|ref|ZP_05297470.1| agmatine deiminase [Listeria monocytogenes FSL J2-003]
gi|386052318|ref|YP_005969876.1| agmatine deiminase [Listeria monocytogenes Finland 1998]
gi|404412152|ref|YP_006697739.1| agmatine deiminase [Listeria monocytogenes SLCC7179]
gi|258599848|gb|EEW13173.1| agmatine deiminase [Listeria monocytogenes FSL N3-165]
gi|346644969|gb|AEO37594.1| agmatine deiminase [Listeria monocytogenes Finland 1998]
gi|404237851|emb|CBY59252.1| agmatine deiminase [Listeria monocytogenes SLCC7179]
Length = 369
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 140/218 (64%), Gaps = 12/218 (5%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++ G P G+ MP E+EPH C+M WP ER DNWR AQ+ + +VA AIS FEP
Sbjct: 3 QLKGLPVEDGFRMPGEYEPHIGCFMIWP---ERPDNWRLGGKPAQQNYKEVAVAISNFEP 59
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VT+ S Q++NAR +LP+ IRVIEMS + +W RD GP+ +V+ + G+D
Sbjct: 60 VTMFVSPNQYKNARKELPDTIRVIEMSNDDAWIRDYGPSFLVDDKG--------DMRGVD 111
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG+ DG Y W D Q+A+K+ ER+ + +LEG SIHVDGEGT +TTE
Sbjct: 112 WGFNAWGGLLDGLYFPWDKDNQIAKKVCELERIDYYSQKDFILEGCSIHVDGEGTLVTTE 171
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
ECLL++ RNP+LTK +IE LK Y V K+IWL G +
Sbjct: 172 ECLLSEGRNPNLTKIEIEQTLKKYFHVQKVIWLKHGFY 209
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR AG RLAASYVN+Y ANG II P F D K D +A +L + +P ++VGI +AREI+L
Sbjct: 292 PRQAGDRLAASYVNYYTANGAIIFPLFDDPK-DKDAQELLEKLYPDRKIVGI-KAREILL 349
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQ P
Sbjct: 350 GGGNIHCITQHLP 362
>gi|385869790|gb|AFI88310.1| Putative agmatine deiminase [Pectobacterium sp. SCC3193]
Length = 367
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 137/219 (62%), Gaps = 11/219 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEW PH WM WP R DNWR+ + AQ+ FA+VA AI++ PV +
Sbjct: 11 TPHQDGFAMPAEWAPHDAVWMIWPYR---TDNWREQGVPAQKTFARVAEAIAQNTPVIMG 67
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A+ +A+ +P N+ ++EM + +W RDTGPTIV+N QA + GIDW FN
Sbjct: 68 VPASYMADAQKVMPVNVTLVEMESDDAWMRDTGPTIVLN--------QAGERRGIDWQFN 119
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WGG G Y DW D VA ++L + R+ ++LEGGSIHVDGEGT LTT ECLLN
Sbjct: 120 AWGGELGGLYEDWRQDENVAAQVLDYHQAARYTAPLILEGGSIHVDGEGTLLTTAECLLN 179
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
NRNPHL+K +IE ++ YL + IIWL G++ DG
Sbjct: 180 PNRNPHLSKAEIEQLMRDYLSISTIIWLEEGVYNDETDG 218
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ G+A RLAG+RLA SYVNF I+N I+ P D+K D A +L Q FP Y + G+
Sbjct: 287 VDSGDAIERLAGSRLAGSYVNFLISNQQIVFPLL-DEKTDDIARDLLQQMFPGYLISGVP 345
Query: 281 RAREIVLGGGNIHCITQQQPAI 302
AREI+LGGGNIHCITQQ PA+
Sbjct: 346 -AREILLGGGNIHCITQQIPAV 366
>gi|261819524|ref|YP_003257630.1| agmatine deiminase [Pectobacterium wasabiae WPP163]
gi|261603537|gb|ACX86023.1| agmatine deiminase [Pectobacterium wasabiae WPP163]
Length = 367
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 137/219 (62%), Gaps = 11/219 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEW PH WM WP R DNWR+ + AQ+ FA+VA AI++ PV +
Sbjct: 11 TPHQDGFAMPAEWAPHDAVWMIWPYR---TDNWREQGVPAQKTFARVAEAIAQNTPVIMG 67
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A+ +A+ +P N+ ++EM + +W RDTGPTIV+N QA + GIDW FN
Sbjct: 68 VPASYMADAQKVMPVNVTLVEMESDDAWMRDTGPTIVLN--------QAGERRGIDWQFN 119
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WGG G Y DW D VA ++L + R+ ++LEGGSIHVDGEGT LTT ECLLN
Sbjct: 120 AWGGELGGLYEDWRQDENVAAQVLDYHQAARYSAPLILEGGSIHVDGEGTLLTTAECLLN 179
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
NRNPHL+K +IE ++ YL + IIWL G++ DG
Sbjct: 180 PNRNPHLSKAEIEQLMRDYLSISTIIWLEEGVYNDETDG 218
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ G+A RLAG+RLA SYVNF I+N I+ P D+K D A +L Q FP Y + G+
Sbjct: 287 VDSGDAIERLAGSRLAGSYVNFLISNQQIVFPLL-DEKTDDIARDLLQQMFPGYLISGVP 345
Query: 281 RAREIVLGGGNIHCITQQQPAI 302
AREI+LGGGNIHCITQQ PA+
Sbjct: 346 -AREILLGGGNIHCITQQIPAV 366
>gi|334703113|ref|ZP_08518979.1| agmatine deiminase [Aeromonas caviae Ae398]
Length = 365
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 135/222 (60%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
MN TPA G+ MPAEW WM WP R DNWR+ AQ FAKVA AI PV
Sbjct: 6 MNSTPAADGFTMPAEWAHQQAVWMIWPFR---PDNWREAGRFAQATFAKVADAIGGATPV 62
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A E AR+ +P ++ ++EM+ + W RDTGPTIV N A + G+DW
Sbjct: 63 FMGVPAQFMEQARAIMPAHVTLVEMASDDCWARDTGPTIVTNA--------AGECRGVDW 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG G Y W+ D +VA ++L + R+ ++LEGGSIHVDGEGTCLTT EC
Sbjct: 115 GFNAWGGHKGGLYYPWNQDEEVAARMLEQHGMDRYDAPLILEGGSIHVDGEGTCLTTAEC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN+NRNPHLTK QIE L+ YLGV IWL G++ DG
Sbjct: 175 LLNENRNPHLTKAQIEAHLRDYLGVTSFIWLDEGVYMDETDG 216
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ G PR A RLA SYVNF I N I+ P D DGEA R+L + FP+++VVG+
Sbjct: 285 VESGSGVPREAEGRLAGSYVNFLITNDRIVYPLL-DAATDGEAQRILEEIFPEHKVVGVP 343
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ P+
Sbjct: 344 -AREILLGGGNIHCITQQIPS 363
>gi|70733814|ref|YP_257454.1| agmatine deiminase [Pseudomonas protegens Pf-5]
gi|123658636|sp|Q4KJX9.1|AGUA_PSEF5 RecName: Full=Agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|68348113|gb|AAY95719.1| agmatine deiminase [Pseudomonas protegens Pf-5]
Length = 368
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 147/224 (65%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MPAEW +Q WM WP ER DNWR AQ A VA AI++FEPV
Sbjct: 4 LHSTPRADGFYMPAEWATQTQAWMIWP---ERPDNWRLGGKPAQAAHAAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SAAQ+ENAR++L NIRV+EMS + +W RDTGPT V+N S +V G+
Sbjct: 61 TVAVSAAQYENARARLDVPNIRVVEMSSDDAWVRDTGPTFVINASG--------EVRGVH 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG + G Y W+ D QVA K+L ER + VLEGGSIHVDGEGT +TTE
Sbjct: 113 WGFNAWGGFEGGLYSPWNRDEQVASKVLEIERCQEYRTEGFVLEGGSIHVDGEGTLITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN NRNPHL++ +IE L+ +L V +I+WLP GL+ DG
Sbjct: 173 ECLLNHNRNPHLSREEIEAVLREHLAVEQIVWLPDGLYNDETDG 216
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 91/177 (51%), Gaps = 23/177 (12%)
Query: 144 VARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQ---- 196
V R+ L+ E++ P + + HVD + E LL + ++P+ + Q
Sbjct: 192 VLREHLAVEQIVWLPDGLYNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYPRCQAALQ 251
Query: 197 -IENELKAYLGVMKIIWLPRGLFGMIHDGE-----------AKPRLAGTRLAASYVNFYI 244
+EN A K+ +P + G ++ E ++ R RLA SYVNF I
Sbjct: 252 VLENTRDAKGRTFKVHKMP--IPGPLYATEEECAGVDAVEGSQERNPSVRLAGSYVNFLI 309
Query: 245 ANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
NGGII P F D D +A +L Q FP++EVV + RE++LGGGNIHC+TQQQPA
Sbjct: 310 VNGGIIAPSF-DDPMDAQAKAILQQLFPEHEVVMVP-GRELLLGGGNIHCLTQQQPA 364
>gi|404403589|ref|ZP_10995173.1| agmatine deiminase [Pseudomonas fuscovaginae UPB0736]
Length = 368
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/224 (53%), Positives = 144/224 (64%), Gaps = 13/224 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MPAEW P +Q WM WP ER DNWR AQ A VA AI++FEPV
Sbjct: 4 LHSTPRADGFHMPAEWAPQTQVWMIWP---ERPDNWRLGGKPAQAAHAAVAKAIARFEPV 60
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
TV SA Q+ENAR++L NIRV+EMS + +W RD+GPT V+N +V G+
Sbjct: 61 TVAVSAGQYENARARLDVPNIRVVEMSSDDAWVRDSGPTFVINDRG--------EVRGVH 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG D G Y W+ D QV KIL ER + VLEGGSIHVDGEGT +TTE
Sbjct: 113 WGFNAWGGFDGGLYFPWNRDEQVGGKILEIERCQEYRTEGFVLEGGSIHVDGEGTVITTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN+NRNPHLT+ +IE L L V K+IWLP GLF DG
Sbjct: 173 ECLLNRNRNPHLTREEIEKVLGEQLAVEKVIWLPDGLFNDETDG 216
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 92/176 (52%), Gaps = 19/176 (10%)
Query: 143 QVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQ--- 196
+V + L+ E++ P + + HVD + E LL + ++P+ + Q
Sbjct: 191 KVLGEQLAVEKVIWLPDGLFNDETDGHVDNFCCYVRPGEVLLAWTDDQQDPNYPRCQAAM 250
Query: 197 --IEN--ELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGT-------RLAASYVNFYIA 245
+EN + K V+ + +P L+ + +AG+ RLA SYVNF I
Sbjct: 251 KVLENARDAKGRAFVVHKMPIPGPLYATEEECAGVDAVAGSQERNPSVRLAGSYVNFLIV 310
Query: 246 NGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
NGGII P F D + D A +L + FP++EVV + RE++LGGGNIHC+TQQQPA
Sbjct: 311 NGGIIAPSFDDPQ-DAVAREILQKLFPQHEVVMVP-GRELLLGGGNIHCLTQQQPA 364
>gi|260901057|ref|ZP_05909452.1| agmatine deiminase [Vibrio parahaemolyticus AQ4037]
gi|308110773|gb|EFO48313.1| agmatine deiminase [Vibrio parahaemolyticus AQ4037]
Length = 360
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/224 (46%), Positives = 140/224 (62%), Gaps = 11/224 (4%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M+++ TPA G+ PAE++P S+ W+ WP ER DNWRDDAL AQ FA++A I++
Sbjct: 1 MKLSTTPAQDGFYFPAEFQPVSEVWLAWP---ERKDNWRDDALPAQETFARIANLIAEVT 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
V V + ++ AR L ++R++E+ N +W RD GPT++VN QA + GI
Sbjct: 58 KVCVAVCSHNFDRARQMLHSDVRLVEIPFNDAWMRDIGPTVLVN--------QAGERRGI 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG +G Y +W D VA + + + VLEGG+IH DGEGT TTE
Sbjct: 110 SWQFNAWGGEYNGLYDNWQQDDLVAGSVCDIIGIDYYRAPFVLEGGAIHTDGEGTLYTTE 169
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLL+ RNP L+K QIE +LKAYLG+ KIIWLP GLF DG
Sbjct: 170 ECLLSPGRNPQLSKAQIEEQLKAYLGIEKIIWLPNGLFNDETDG 213
>gi|417323431|ref|ZP_12109959.1| hypothetical protein VP10329_14495 [Vibrio parahaemolyticus 10329]
gi|328468843|gb|EGF39803.1| hypothetical protein VP10329_14495 [Vibrio parahaemolyticus 10329]
Length = 360
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/224 (46%), Positives = 140/224 (62%), Gaps = 11/224 (4%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M+++ TPA G+ PAE++P S+ W+ WP ER DNWRDDAL AQ FA++A I++
Sbjct: 1 MKLSTTPAQDGFYFPAEFQPVSEVWLAWP---ERKDNWRDDALPAQETFARIANLIAEVT 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
V V + ++ AR L ++R++E+ N +W RD GPT++VN QA + GI
Sbjct: 58 KVCVAVCSHNFDRARQMLHSDVRLVEIPFNDAWMRDIGPTVLVN--------QAGERRGI 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG +G Y +W D VA + + + VLEGG+IH DGEGT TTE
Sbjct: 110 SWQFNAWGGEYNGLYDNWQQDDLVAGSVCDIIGIDYYRAPFVLEGGAIHTDGEGTLYTTE 169
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLL+ RNP L+K QIE +LKAYLG+ KIIWLP GLF DG
Sbjct: 170 ECLLSPGRNPQLSKAQIEEQLKAYLGIEKIIWLPNGLFNDETDG 213
>gi|422417476|ref|ZP_16494431.1| agmatine deiminase, partial [Listeria seeligeri FSL N1-067]
gi|313635437|gb|EFS01691.1| agmatine deiminase [Listeria seeligeri FSL N1-067]
Length = 311
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 142/218 (65%), Gaps = 12/218 (5%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++NG P G+ MP E+E H C+M WP ER DNWR AQ+ + +VA AISKFEP
Sbjct: 3 QLNGLPIEDGFRMPGEYELHIGCFMIWP---ERPDNWRLGGKPAQQNYKEVAIAISKFEP 59
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VT+ SA Q++NAR +LP+ IRVIEMS + +W RD GP+ ++N A + G++
Sbjct: 60 VTMFVSANQYKNARKELPDAIRVIEMSNDDAWIRDYGPSFLINNKGA--------MRGVN 111
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG+ DG Y W D Q+A+KI ER + + +LEG SIHVDGEGT +TTE
Sbjct: 112 WGFNAWGGLLDGLYFPWDKDNQMAKKICDLERXXXYSLENFILEGCSIHVDGEGTLVTTE 171
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
ECLL++ RNP L+K +IE LK Y V K+IWL G +
Sbjct: 172 ECLLSEGRNPKLSKIEIEQTLKKYFNVKKVIWLKHGFY 209
>gi|269966485|ref|ZP_06180569.1| hypothetical protein VMC_19990 [Vibrio alginolyticus 40B]
gi|269828942|gb|EEZ83192.1| hypothetical protein VMC_19990 [Vibrio alginolyticus 40B]
Length = 360
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/224 (46%), Positives = 140/224 (62%), Gaps = 11/224 (4%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M+++ TPA G+ PAE++P S+ W+ WP ER DNWRDDAL AQ FA++A I++
Sbjct: 1 MKLSTTPAQDGFYFPAEFQPVSEVWLAWP---ERKDNWRDDALPAQETFARIANLIAEVA 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
V V + ++ AR L ++R++E+ N +W RD GPT++VN QA + GI
Sbjct: 58 KVCVAVCSHNFDRARQMLHSDVRLVEIPFNDAWMRDIGPTVLVN--------QAGERRGI 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG +G Y +W D VA + + + VLEGG+IH DGEGT TTE
Sbjct: 110 SWQFNAWGGEYNGLYDNWQQDDLVAGSVCDIIGIDYYRAPFVLEGGAIHTDGEGTLYTTE 169
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLL+ RNP L+K QIE +LKAYLG+ KIIWLP GLF DG
Sbjct: 170 ECLLSPGRNPQLSKAQIEEQLKAYLGIEKIIWLPNGLFNDETDG 213
>gi|433657902|ref|YP_007275281.1| Agmatine deiminase [Vibrio parahaemolyticus BB22OP]
gi|432508590|gb|AGB10107.1| Agmatine deiminase [Vibrio parahaemolyticus BB22OP]
Length = 360
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/224 (46%), Positives = 140/224 (62%), Gaps = 11/224 (4%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M+++ TPA G+ PAE++P S+ W+ WP ER DNWRDDAL AQ FA++A I++
Sbjct: 1 MKVSTTPAQDGFYFPAEFQPVSEVWLAWP---ERKDNWRDDALPAQETFARIANLIAEVT 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
V V + ++ AR L ++R++E+ N +W RD GPT++VN QA + GI
Sbjct: 58 KVCVAVCSHNFDRARQMLHSDVRLVEIPFNDAWMRDIGPTVLVN--------QAGERRGI 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG +G Y +W D VA + + + VLEGG+IH DGEGT TTE
Sbjct: 110 SWQFNAWGGEYNGLYDNWQQDDLVAGSVCDIIGIDYYRAPFVLEGGAIHTDGEGTLYTTE 169
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLL+ RNP L+K QIE +LKAYLG+ KIIWLP GLF DG
Sbjct: 170 ECLLSPGRNPQLSKAQIEEQLKAYLGIEKIIWLPNGLFNDETDG 213
>gi|227327594|ref|ZP_03831618.1| agmatine deiminase [Pectobacterium carotovorum subsp. carotovorum
WPP14]
Length = 386
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 137/219 (62%), Gaps = 11/219 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEW PH WM WP R DNWR+ + AQ+ FA+VA AI++ PV +
Sbjct: 11 TPQQDGFAMPAEWAPHDAVWMIWPYR---TDNWREQGVPAQKTFARVAEAIAQNTPVIMG 67
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A +A+ +P N+ ++EM + +W RDTGPTIV+N QA + GIDW FN
Sbjct: 68 VPARYMADAQKVMPVNVTLVEMESDDAWMRDTGPTIVLN--------QAGERRGIDWQFN 119
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WGG G Y DW D +VA ++L + R+ ++LEGGSIHVDGEGT LTT ECLLN
Sbjct: 120 AWGGELGGLYEDWRQDEKVAAQVLDYHQAARYVAPLILEGGSIHVDGEGTLLTTAECLLN 179
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
NRNPHL+K +IE ++ YL + +IWL G++ DG
Sbjct: 180 PNRNPHLSKAEIEQLMRDYLDISTVIWLEEGVYNDETDG 218
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ G+A RLAG+RLA SYVNF I+N II P D+K D A +L Q FP Y + G+
Sbjct: 287 VDSGDAVERLAGSRLAGSYVNFLISNQQIIFPLL-DEKTDDVARDLLQQMFPGYLISGVP 345
Query: 281 RAREIVLGG 289
AREI+LGG
Sbjct: 346 -AREILLGG 353
>gi|16802088|ref|NP_463573.1| agmatine deiminase [Listeria monocytogenes EGD-e]
gi|255016978|ref|ZP_05289104.1| agmatine deiminase [Listeria monocytogenes FSL F2-515]
gi|284803219|ref|YP_003415084.1| agmatine deiminase [Listeria monocytogenes 08-5578]
gi|284996360|ref|YP_003418128.1| agmatine deiminase [Listeria monocytogenes 08-5923]
gi|386042387|ref|YP_005961192.1| agmatine deiminase [Listeria monocytogenes 10403S]
gi|386048969|ref|YP_005966960.1| agmatine deiminase [Listeria monocytogenes FSL R2-561]
gi|404282470|ref|YP_006683367.1| agmatine deiminase [Listeria monocytogenes SLCC2372]
gi|405757027|ref|YP_006686303.1| agmatine deiminase [Listeria monocytogenes SLCC2479]
gi|73622158|sp|Q8YAS3.1|AGUA2_LISMO RecName: Full=Putative agmatine deiminase 2; AltName: Full=Agmatine
iminohydrolase 2
gi|16409399|emb|CAC98255.1| lmo0040 [Listeria monocytogenes EGD-e]
gi|284058781|gb|ADB69722.1| agmatine deiminase [Listeria monocytogenes 08-5578]
gi|284061827|gb|ADB72766.1| agmatine deiminase [Listeria monocytogenes 08-5923]
gi|345535621|gb|AEO05061.1| agmatine deiminase [Listeria monocytogenes 10403S]
gi|346422815|gb|AEO24340.1| agmatine deiminase [Listeria monocytogenes FSL R2-561]
gi|404231972|emb|CBY53375.1| agmatine deiminase [Listeria monocytogenes SLCC2372]
gi|404234909|emb|CBY56311.1| agmatine deiminase [Listeria monocytogenes SLCC2479]
gi|441469588|emb|CCQ19343.1| Putative agmatine deiminase 2 [Listeria monocytogenes]
gi|441472721|emb|CCQ22475.1| Putative agmatine deiminase 2 [Listeria monocytogenes N53-1]
Length = 369
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 139/218 (63%), Gaps = 12/218 (5%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++ G P G+ MP E+EPH C+M WP ER DNWR AQ+ + +VA AIS FEP
Sbjct: 3 QLKGLPVEDGFRMPGEYEPHIGCFMIWP---ERPDNWRLGGKPAQQNYKEVAVAISNFEP 59
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VT+ S Q++NAR +LP+ IRVIEMS + +W RD GP+ +V+ + G+D
Sbjct: 60 VTMFVSPNQYKNARKELPDTIRVIEMSNDDAWIRDYGPSFLVDDKG--------DMRGVD 111
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG+ DG Y W D Q+A+K+ ER+ + +LEG SIHVDGEGT +TTE
Sbjct: 112 WGFNAWGGLLDGLYFPWDKDNQIAKKVCELERIDYYSQKDFILEGCSIHVDGEGTLVTTE 171
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
ECLL++ RNP+LTK +IE LK Y K+IWL G +
Sbjct: 172 ECLLSEGRNPNLTKIEIEQTLKKYFHAQKVIWLKHGFY 209
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR AG RLAASYVN+Y ANG II P F D K D +A +L + +P ++VGI +AREI+L
Sbjct: 292 PRQAGDRLAASYVNYYTANGAIIFPLFDDPK-DKDAQELLEKLYPDRKIVGI-KAREILL 349
Query: 288 GGGNIHCITQQQPAIPT 304
GGGNIHCITQ P T
Sbjct: 350 GGGNIHCITQHLPDKST 366
>gi|47095108|ref|ZP_00232720.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|254913158|ref|ZP_05263170.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254937539|ref|ZP_05269236.1| agmatine deiminase [Listeria monocytogenes F6900]
gi|386045680|ref|YP_005964012.1| agmatine deiminase [Listeria monocytogenes J0161]
gi|47016453|gb|EAL07374.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|258610140|gb|EEW22748.1| agmatine deiminase [Listeria monocytogenes F6900]
gi|293591159|gb|EFF99493.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|345532671|gb|AEO02112.1| agmatine deiminase [Listeria monocytogenes J0161]
Length = 369
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 139/218 (63%), Gaps = 12/218 (5%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++ G P G+ MP E+EPH C+M WP ER DNWR AQ+ + +VA AIS FEP
Sbjct: 3 QLKGLPVEDGFRMPGEYEPHIGCFMIWP---ERPDNWRLGGKPAQQNYKEVAVAISNFEP 59
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VT+ S Q++NAR +LP+ IRVIEMS + +W RD GP+ +V+ + G+D
Sbjct: 60 VTMFVSPNQYKNARKELPDTIRVIEMSNDDAWIRDYGPSFLVDDKG--------DMRGVD 111
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG+ DG Y W D Q+A+K+ ER+ + +LEG SIHVDGEGT +TTE
Sbjct: 112 WGFNAWGGLLDGLYFPWDKDNQIAKKVCELERIDYYSQKDFILEGCSIHVDGEGTLVTTE 171
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
ECLL++ RNP+LTK +IE LK Y K+IWL G +
Sbjct: 172 ECLLSEGRNPNLTKIEIEQTLKKYFHAQKVIWLKHGFY 209
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR AG RLAASYVN+Y ANG II P F D K D +A +L +P ++VGI +AREI+L
Sbjct: 292 PRQAGDRLAASYVNYYTANGAIIFPLFDDPK-DKDAQELLEMLYPDRKIVGI-KAREILL 349
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQ P
Sbjct: 350 GGGNIHCITQHLP 362
>gi|117618745|ref|YP_855284.1| agmatine deiminase [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117560152|gb|ABK37100.1| agmatine deiminase [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 365
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 108/222 (48%), Positives = 136/222 (61%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
MN TPA G+ MPAEW WM WP R DNWR+ AQ FAKVA AI + PV
Sbjct: 6 MNTTPAADGFTMPAEWAHQQAVWMIWPFR---PDNWREAGRFAQATFAKVADAIGQATPV 62
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A E AR+ +P ++ ++EM+ + W RD+GPTIV N A + G+DW
Sbjct: 63 FMGVPAQFMEQARAIMPAHVTLVEMNSDDCWARDSGPTIVTNA--------AGECRGVDW 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG G Y W D QVA ++L+ + R+ ++LEGGSIHVDGEGTCLTT EC
Sbjct: 115 GFNAWGGHKGGLYYPWDQDEQVAAQMLAQHGMARYDAPLILEGGSIHVDGEGTCLTTAEC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN+NRNPHL+K QIE L+ YLGV IWL G++ DG
Sbjct: 175 LLNENRNPHLSKEQIEAHLRDYLGVQSFIWLDEGVYMDETDG 216
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ G PR A RLA SYVNF I N I+ P D DGEA R+L + FP+++VVG+
Sbjct: 285 VESGTGVPREAEGRLAGSYVNFLITNDRIVYPLL-DAATDGEAQRILEEIFPEHKVVGVP 343
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ P+
Sbjct: 344 -AREILLGGGNIHCITQQIPS 363
>gi|403060496|ref|YP_006648713.1| agmatine deiminase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402807822|gb|AFR05460.1| agmatine deiminase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
Length = 367
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 136/219 (62%), Gaps = 11/219 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEW PH WM WP R DNWR+ + AQ+ FA+VA AI++ PV +
Sbjct: 11 TPHQDGFAMPAEWAPHDAVWMIWPYR---TDNWREQGVPAQKTFARVAEAIAQNTPVIMG 67
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A +A+ +P N+ ++EM + +W RDTGPTIV+N++ G IDW FN
Sbjct: 68 VPARYMADAQQVMPVNVTLVEMESDDAWMRDTGPTIVLNQTGERRG--------IDWQFN 119
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WGG G Y DW D +VA ++L + R+ ++LEGGSIHVDGEGT LTT ECLLN
Sbjct: 120 AWGGELGGLYEDWRQDEKVAAQVLDYHQAARYAAPLILEGGSIHVDGEGTLLTTAECLLN 179
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
NRNPHL+K +IE ++ YL + IIWL G++ DG
Sbjct: 180 PNRNPHLSKAEIEQLMRDYLSISTIIWLEEGVYNDETDG 218
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ G+A RLAG+RLA SYVNF I+N II P D+K D A +L Q FP Y + G+
Sbjct: 287 VDSGDAVERLAGSRLAGSYVNFLISNQQIIFPLL-DEKTDDVARDLLQQMFPGYLISGVP 345
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ PA
Sbjct: 346 -AREILLGGGNIHCITQQIPA 365
>gi|338998012|ref|ZP_08636694.1| agmatine deiminase [Halomonas sp. TD01]
gi|338765143|gb|EGP20093.1| agmatine deiminase [Halomonas sp. TD01]
Length = 376
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 108/211 (51%), Positives = 136/211 (64%), Gaps = 11/211 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TPA GY MPAE+ PH CWM WP +R D WR A AQ+ FA VA AI++ E V V
Sbjct: 20 TPASLGYSMPAEFAPHEACWMLWP---QRPDTWRYGAKPAQQAFADVAIAIAESETVFVG 76
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
+ Q+ENAR+QLP +IRV+E+S N +W RD GPT V + +A IDW FN
Sbjct: 77 VNDEQYENARNQLPAHIRVVELSSNDAWMRDVGPTFVTHPDG--------HLALIDWEFN 128
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WGG+ +G Y W D ++ KI + RF +VLEGG+IHVDGEGT +TTEECLLN
Sbjct: 129 AWGGLKEGLYFPWDKDRRIRCKISEMLGIQRFEAPLVLEGGAIHVDGEGTLITTEECLLN 188
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
NRNP + + IE L+ YLG+ K+IWLPRG
Sbjct: 189 PNRNPDMNRETIERWLQEYLGISKVIWLPRG 219
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G+ + PRL G R+A SYVNFYI N ++ P D + DGEA +LS FP V+G
Sbjct: 295 GLDRLNSSHPRLPGDRMAGSYVNFYIGNSVVVMPLL-DPRHDGEAEDILSTLFPTKRVIG 353
Query: 279 IERAREIVLGGGNIHCITQQQPAI 302
+ AREI+LGGGNIHCITQQQP +
Sbjct: 354 VP-AREILLGGGNIHCITQQQPRV 376
>gi|154251598|ref|YP_001412422.1| agmatine deiminase [Parvibaculum lavamentivorans DS-1]
gi|154155548|gb|ABS62765.1| Agmatine deiminase [Parvibaculum lavamentivorans DS-1]
Length = 369
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 112/215 (52%), Positives = 135/215 (62%), Gaps = 11/215 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MPAE+EPH+ WM WP ER DNWR A AQ F VA AIS EPV
Sbjct: 5 LETTPKADGFRMPAEFEPHAGTWMLWP---ERPDNWRLGAKPAQHAFVAVAEAISGGEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV AS Q+ NAR+ LP IRV+E+S + SW RD G T VV+ V IDW
Sbjct: 62 TVGASPRQFANARAMLPPQIRVVEISNDDSWMRDCGATFVVDGKGG--------VRAIDW 113
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG+D G Y W D VA K+ ER+ R+ ++LEGGSIHVDGEGT LTTEEC
Sbjct: 114 IFNAWGGLDGGLYFPWDQDDLVASKMAEIERVDRYRAPIILEGGSIHVDGEGTLLTTEEC 173
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
LLN NRNP L++ +IE L YL + KI+WL G+
Sbjct: 174 LLNPNRNPGLSRAEIEAVLTDYLNLEKIVWLGLGV 208
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
Query: 227 KPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIV 286
+PRL G RLAASYVNFYIANG + P FGD DG A+ ++ P +VV + AREI+
Sbjct: 291 QPRLPGARLAASYVNFYIANGVVAVPVFGDPH-DGAAIDKIAALLPGRKVVAVP-AREIL 348
Query: 287 LGGGNIHCITQQQPA 301
LGGGNIHCITQQQPA
Sbjct: 349 LGGGNIHCITQQQPA 363
>gi|420136817|ref|ZP_14644840.1| agmatine deiminase, partial [Pseudomonas aeruginosa CIG1]
gi|403250427|gb|EJY63860.1| agmatine deiminase, partial [Pseudomonas aeruginosa CIG1]
Length = 200
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 140/204 (68%), Gaps = 13/204 (6%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEWEPH Q WM WP ER DNWR+ AQ FA VA AI++FEPVTVC
Sbjct: 7 TPRADGFRMPAEWEPHEQTWMVWP---ERPDNWRNGGKPAQAAFAAVAKAIARFEPVTVC 63
Query: 66 ASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
ASA Q+ENAR++L + NIRV+E+S + +W RDTGPT V++ V G+DW F
Sbjct: 64 ASAGQYENARARLDDGNIRVVEISSDDAWVRDTGPTFVIDDKG--------DVRGVDWGF 115
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECL 183
N+WGG + G Y W D QVARKIL ER R+ VLEGGSIHVDGEGT +TTEECL
Sbjct: 116 NAWGGFEGGLYFPWQRDDQVARKILEIERRARYRTDDFVLEGGSIHVDGEGTLITTEECL 175
Query: 184 LNKNRNPHLTKGQIENELKAYLGV 207
LN NRNPHL++ +IE L+ YL V
Sbjct: 176 LNHNRNPHLSQVEIERTLRDYLAV 199
>gi|28898547|ref|NP_798152.1| hypothetical protein VP1773 [Vibrio parahaemolyticus RIMD 2210633]
gi|153836237|ref|ZP_01988904.1| agmatine deiminase [Vibrio parahaemolyticus AQ3810]
gi|260365013|ref|ZP_05777584.1| agmatine deiminase [Vibrio parahaemolyticus K5030]
gi|260879592|ref|ZP_05891947.1| agmatine deiminase [Vibrio parahaemolyticus AN-5034]
gi|260894933|ref|ZP_05903429.1| agmatine deiminase [Vibrio parahaemolyticus Peru-466]
gi|73622179|sp|Q87NU5.1|AGUA_VIBPA RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|28806765|dbj|BAC60036.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149750512|gb|EDM61257.1| agmatine deiminase [Vibrio parahaemolyticus AQ3810]
gi|308086076|gb|EFO35771.1| agmatine deiminase [Vibrio parahaemolyticus Peru-466]
gi|308093221|gb|EFO42916.1| agmatine deiminase [Vibrio parahaemolyticus AN-5034]
gi|308111615|gb|EFO49155.1| agmatine deiminase [Vibrio parahaemolyticus K5030]
Length = 360
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 139/224 (62%), Gaps = 11/224 (4%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M+++ TPA G+ PAE++P S+ W+ WP ER DNWRDDAL AQ FA++A I++
Sbjct: 1 MKLSTTPAQDGFYFPAEFQPVSEVWLAWP---ERKDNWRDDALPAQETFARIANLIAEVT 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
V V + ++ AR L ++R++E+ N +W RD GPT++VN QA + GI
Sbjct: 58 KVCVAVCSHNFDRARQMLHSDVRLVEIPFNDAWMRDIGPTVLVN--------QAGERRGI 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG +G Y +W D VA + + + VLEGG+IH DGEGT TTE
Sbjct: 110 SWQFNAWGGEYNGLYDNWQQDDLVAGSVCDIIGIDYYRAPFVLEGGAIHTDGEGTLYTTE 169
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLL+ RNP L+K QIE +LK YLG+ KIIWLP GLF DG
Sbjct: 170 ECLLSPGRNPQLSKAQIEEQLKVYLGIEKIIWLPNGLFNDETDG 213
>gi|427430036|ref|ZP_18919960.1| Agmatine deiminase [Caenispirillum salinarum AK4]
gi|425879415|gb|EKV28122.1| Agmatine deiminase [Caenispirillum salinarum AK4]
Length = 338
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 130/351 (37%), Positives = 174/351 (49%), Gaps = 73/351 (20%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TPA G+ MPAEWEPH +CWM WP R E DN A A + VA AI +FEPVT+
Sbjct: 3 TPADLGFRMPAEWEPHERCWMAWPCRPESWDNGLPAAYDA---YTAVARAIRRFEPVTMI 59
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A + AR L ++I VI ++ SW RD GP + ++ +VAG+DW FN
Sbjct: 60 ARPEDADTARQLLGDDIDVIAWPLDDSWTRDIGPLFLKGRNG--------EVAGVDWGFN 111
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WG + Y ++ D ++A +IL RF +LEGGSIHVDG+GT LTTEECL +
Sbjct: 112 AWGLL----YEGFAEDARIAGRILDHVGARRFAGPQILEGGSIHVDGQGTLLTTEECLFD 167
Query: 186 KNRNPHLTKGQIE---------------------NELKAYLGVMKIIWLPRGLFGMIHDG 224
RNPHL + +E +E ++ + P + + +
Sbjct: 168 PERNPHLRREDMEANLKGWLGVETVIWLGKGLQNDETTGHVDNVACFAAPGKVLMVTSED 227
Query: 225 EAKPRLA-----------------------------------GTRLAASYVNFYIANGGI 249
A P A G R+A SYVNFYIANGG+
Sbjct: 228 PADPDTATLKDNRDRLREARDAQGRPLEIIDLPQAPRRNDARGERMALSYVNFYIANGGV 287
Query: 250 ITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
+ P FG + D +A +L AFP + V + A E+ +GGGNIHCITQQQP
Sbjct: 288 VMPSFGVPE-DKDAADILRHAFPDHVVTQVP-AFEVAVGGGNIHCITQQQP 336
>gi|304386013|ref|ZP_07368354.1| agmatine deiminase [Pediococcus acidilactici DSM 20284]
gi|427440531|ref|ZP_18924877.1| agmatine deiminase [Pediococcus lolii NGRI 0510Q]
gi|304327936|gb|EFL95161.1| agmatine deiminase [Pediococcus acidilactici DSM 20284]
gi|425787492|dbj|GAC45665.1| agmatine deiminase [Pediococcus lolii NGRI 0510Q]
Length = 364
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 143/217 (65%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MP E+E H+ +M WP +R DNWR+ AQ+ FA+VA AI++FEPV
Sbjct: 4 LDSTPKKDGFRMPGEFEEHAGAYMLWP---QRPDNWRNGGKPAQKTFAQVAEAIAEFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV + Q+ENAR+ LP+ ++VIE+S N SW RD G T V N ++ +DW
Sbjct: 61 TVGVNDDQYENARNMLPDQVKVIEISNNDSWIRDCGATFVKNDHG--------ELRAVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG+ DG Y W D +VA+K+ E+ R+ VLEGGSIHVDG+GT +TTEE
Sbjct: 113 TFNAWGGLVDGLYFPWDKDDRVAQKMAELEQTDRYRLDDFVLEGGSIHVDGQGTLITTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL++ RNP L+K QIE LK +L + KIIWL +G++
Sbjct: 173 CLLSEGRNPQLSKAQIEEVLKEHLNLEKIIWLKKGIY 209
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G RLAASY+N+Y ANGGII P F D D EA +VLS+ +P +VVG+ AREI+L
Sbjct: 292 PRTEGERLAASYINYYTANGGIIFPLFND-PMDKEAQKVLSELYPDRKVVGVP-AREILL 349
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQ P
Sbjct: 350 GGGNIHCITQQVP 362
>gi|411010736|ref|ZP_11387065.1| agmatine deiminase [Aeromonas aquariorum AAK1]
Length = 365
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 107/222 (48%), Positives = 136/222 (61%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
MN TPA G+ MPAEW WM WP R DNWR+ AQ FAKVA AI + PV
Sbjct: 6 MNTTPAADGFTMPAEWAHQQAVWMIWPFR---PDNWREAGRFAQATFAKVADAIGQATPV 62
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A E AR+ +P ++ ++EM+ + W RD+GPT+V N A + G+DW
Sbjct: 63 FMGVPARFMEQARAIMPSHVTLVEMNSDDCWARDSGPTVVTNA--------AGECRGVDW 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG G Y W D QVA ++L+ + R+ ++LEGGSIHVDGEGTCLTT EC
Sbjct: 115 GFNAWGGHKGGLYYPWDQDEQVAAQMLAQHGMDRYDAPLILEGGSIHVDGEGTCLTTVEC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN+NRNPHL+K QIE L+ YLGV IWL G++ DG
Sbjct: 175 LLNENRNPHLSKAQIEAHLRDYLGVKSFIWLDEGVYMDETDG 216
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ G PR A RLA SYVNF I N I+ P D DGEA R+L + FP + VVG+
Sbjct: 285 VESGTGVPREAEGRLAGSYVNFLITNDRIVYPLL-DAATDGEAQRILEEIFPDHTVVGVP 343
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ P+
Sbjct: 344 -AREILLGGGNIHCITQQIPS 363
>gi|418068442|ref|ZP_12705725.1| agmatine deiminase [Pediococcus acidilactici MA18/5M]
gi|357539550|gb|EHJ23568.1| agmatine deiminase [Pediococcus acidilactici MA18/5M]
Length = 364
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 143/217 (65%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MP E+E H+ +M WP +R DNWR+ AQ+ FA+VA AI++FEPV
Sbjct: 4 LDSTPKKDGFRMPGEFEEHAGAYMLWP---QRPDNWRNGGKPAQKTFAQVAEAIAEFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV + Q+ENAR+ LP+ ++VIE+S N SW RD G T V N ++ +DW
Sbjct: 61 TVGVNDDQYENARNMLPDQVKVIEISNNDSWIRDCGATFVKNDHG--------ELRAVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG+ DG Y W D +VA+K+ E+ R+ VLEGGSIHVDG+GT +TTEE
Sbjct: 113 TFNAWGGLVDGLYFPWDKDDRVAQKMAELEQTDRYRLDDFVLEGGSIHVDGQGTLITTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL++ RNP L+K QIE LK +L + KIIWL +G++
Sbjct: 173 CLLSEGRNPQLSKDQIEEVLKEHLNLEKIIWLKKGIY 209
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G RLAASY+N+Y ANGGII P F D D EA +VLS+ +P +VVG+ AREI+L
Sbjct: 292 PRTEGERLAASYINYYTANGGIIFPLFND-PMDKEAQKVLSELYPDRKVVGVP-AREILL 349
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQ P
Sbjct: 350 GGGNIHCITQQVP 362
>gi|325288851|ref|YP_004265032.1| agmatine deiminase [Syntrophobotulus glycolicus DSM 8271]
gi|324964252|gb|ADY55031.1| agmatine deiminase [Syntrophobotulus glycolicus DSM 8271]
Length = 345
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 129/353 (36%), Positives = 176/353 (49%), Gaps = 73/353 (20%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
P Y MP EW+ H+Q + WPVR + +D + +A++ AI++FEPVTV
Sbjct: 3 PKDLNYRMPPEWDGHAQTLISWPVRESMC--YPEDYASVCQAYAEIIRAIAEFEPVTVMV 60
Query: 67 SAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
++ S E I+ + + N +W RD GPT +V+ VAG++W FN
Sbjct: 61 NSPDLSTFSSLFQEGRIQYLPIEHNDAWLRDNGPTFLVSDQG--------DVAGVNWQFN 112
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WGG Y W LD Q A IL L +F ++LEGGSIHVDGEGT LTTEECLLN
Sbjct: 113 AWGGK----YSPWDLDNQAAPAILDHFALKQFDSPLILEGGSIHVDGEGTVLTTEECLLN 168
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG--------------------- 224
NRN LT+ QIE++LK YL + K+IWL GL G DG
Sbjct: 169 PNRNRGLTREQIEDQLKKYLNIRKVIWLKSGLSGDETDGHVDNVACFAAPGKILLQVCDD 228
Query: 225 --------------------------------EAKPRLA--GTRLAASYVNFYIANGGII 250
+ P+++ G RL SY+NFY NGG+I
Sbjct: 229 PEDENYAITRENLKVLTGATDARDRKLDIIPVQQPPKMSDRGRRLTLSYLNFYFVNGGLI 288
Query: 251 TPQFGDK--KWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
P FG + K D A+RVL + FP+ ++ + ++ GGN+HCITQQ P+
Sbjct: 289 LPVFGGQAEKSDHSAIRVLGELFPERQLRTV-NGMGLIREGGNVHCITQQLPS 340
>gi|270291523|ref|ZP_06197744.1| agmatine deiminase [Pediococcus acidilactici 7_4]
gi|270280020|gb|EFA25857.1| agmatine deiminase [Pediococcus acidilactici 7_4]
Length = 364
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 143/217 (65%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MP E+E H+ +M WP +R DNWR+ AQ+ FA+VA AI++FEPV
Sbjct: 4 LDSTPKKDGFRMPGEFEEHAGAYMLWP---QRPDNWRNGGKPAQKTFAQVAEAIAEFEPV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV + Q+ENAR+ LP+ ++VIE+S N SW RD G T V N ++ +DW
Sbjct: 61 TVGVNDDQYENARNMLPDQVKVIEISNNDSWIRDCGATFVKNDHG--------ELRAVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG+ DG Y W D +VA+K+ E+ R+ VLEGGSIHVDG+GT +TTEE
Sbjct: 113 TFNAWGGLVDGLYFPWDKDDRVAQKMAELEQTDRYRLDDFVLEGGSIHVDGQGTLITTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL++ RNP L+K QIE LK +L + KIIWL +G++
Sbjct: 173 CLLSEGRNPQLSKDQIEEVLKEHLNLEKIIWLKKGIY 209
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G RLAASY+N+Y ANGGII P F D D EA +VLS+ +P +VVG+ AREI+L
Sbjct: 292 PRTEGERLAASYINYYTANGGIIFPLFND-PMDKEAQKVLSELYPDRKVVGVP-AREILL 349
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQ P
Sbjct: 350 GGGNIHCITQQVP 362
>gi|354599591|ref|ZP_09017608.1| Agmatine deiminase [Brenneria sp. EniD312]
gi|353677526|gb|EHD23559.1| Agmatine deiminase [Brenneria sp. EniD312]
Length = 362
Score = 209 bits (533), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 108/224 (48%), Positives = 136/224 (60%), Gaps = 11/224 (4%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M TP G+ MPAEW P WM WP R DNWRD+AL AQ+ FA VA AI++
Sbjct: 1 MSQLTTPHQDGFAMPAEWAPQEAVWMLWPYRR---DNWRDEALPAQKTFAAVAEAIARQT 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
PV + A + A+ +P N+ ++EM + +W RDTGPT+V+N QA + GI
Sbjct: 58 PVIMGVPARYLDEAKRIMPANVTLVEMESDDAWMRDTGPTMVLN--------QAGERRGI 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DW FN+WGG G Y DW D +VA ++LS R+ +VLEGGSIH DGEGT LTT
Sbjct: 110 DWRFNAWGGELGGLYEDWRQDEKVAAQVLSYHGDARYAAPLVLEGGSIHTDGEGTLLTTA 169
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN NRNP L+K +IE + YLGV IIWL G++ DG
Sbjct: 170 ECLLNPNRNPQLSKARIEQLMHDYLGVSTIIWLAEGVYNDETDG 213
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ G A R AG RLA SYVNF I+N II P D++ D A +L Q FP Y + G+
Sbjct: 282 VDAGNAIERNAGARLAGSYVNFLISNRQIIFPLL-DERTDDIARDLLQQMFPDYTIRGVP 340
Query: 281 RAREIVLGGGNIHCITQQQPAI 302
AREI+LGGGNIHCITQQ PA+
Sbjct: 341 -AREILLGGGNIHCITQQIPAV 361
>gi|423199683|ref|ZP_17186266.1| agmatine deiminase [Aeromonas hydrophila SSU]
gi|404628939|gb|EKB25704.1| agmatine deiminase [Aeromonas hydrophila SSU]
Length = 365
Score = 209 bits (533), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 107/222 (48%), Positives = 136/222 (61%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
MN TPA G+ MPAEW WM WP R DNWR+ AQ FAKVA AI + PV
Sbjct: 6 MNTTPAADGFTMPAEWAHQQAVWMIWPFR---PDNWREAGRFAQATFAKVADAIGQATPV 62
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A E AR+ +P ++ ++EM+ + W RD+GPT+V N A + G+DW
Sbjct: 63 FMGVPAQFREQARAIMPSHVTLVEMNSDDCWARDSGPTVVTNA--------AGECRGVDW 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG G Y W D QVA ++L+ + R+ ++LEGGSIHVDGEG+CLTT EC
Sbjct: 115 GFNAWGGHKGGLYYPWDQDEQVAAQMLAQHGMDRYDAPLILEGGSIHVDGEGSCLTTAEC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN+NRNPHLTK QIE L+ YLGV IWL G++ DG
Sbjct: 175 LLNENRNPHLTKEQIEAHLRDYLGVKSFIWLDEGVYMDETDG 216
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ G PR A RLA SYVNF I N I+ P D DGEA R+L + FP+++VVG+
Sbjct: 285 VESGTGVPREAEGRLAGSYVNFLITNDRIVYPLL-DAATDGEAQRILEEIFPEHKVVGVP 343
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ P+
Sbjct: 344 -AREILLGGGNIHCITQQIPS 363
>gi|347360647|emb|CCA89500.1| agmatine deiminase [Lactococcus lactis subsp. cremoris]
Length = 366
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/213 (50%), Positives = 136/213 (63%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E Q +M WP ER DNWRD A Q F VA AISKF PVT+
Sbjct: 9 TPKEDGFRMPGEFEAQDQIFMIWP---ERPDNWRDGAKPVQIAFTNVAKAISKFTPVTML 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S AQ++NAR QLPE++RV+E+S N SW RD GP+ V+N ++ DW FN
Sbjct: 66 VSQAQYQNARYQLPEHVRVLEVSNNDSWVRDCGPSFVINDKG--------ELRANDWTFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W D VA+K+ E + + VLEGGS HVDGEGT LTTE CLL
Sbjct: 118 AWGGLVDGLYFPWDQDDLVAQKVCELEHVDSYRTDDFVLEGGSFHVDGEGTVLTTEMCLL 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
++ RNPH++K IEN+LKA+L V K++WL G+
Sbjct: 178 SEGRNPHMSKEDIENKLKAHLNVEKVLWLGDGI 210
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I N G+I PQ+GD+ D A++ + + FP E+VG+ E+V
Sbjct: 293 PREDGDICIASYMNFLITNKGVIVPQYGDEN-DALALKQVQEMFPDREIVGVNTV-EVVY 350
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQQP
Sbjct: 351 GGGNIHCITQQQP 363
>gi|91223882|ref|ZP_01259146.1| hypothetical protein V12G01_19097 [Vibrio alginolyticus 12G01]
gi|91191374|gb|EAS77639.1| hypothetical protein V12G01_19097 [Vibrio alginolyticus 12G01]
Length = 360
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/224 (45%), Positives = 139/224 (62%), Gaps = 11/224 (4%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M+++ TPA G+ PAE++P S+ W+ WP ER DNWRDDAL AQ FA++A I+
Sbjct: 1 MKLSTTPAQDGFYFPAEFQPVSEVWLAWP---ERKDNWRDDALPAQETFARIANLIADVT 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
V V + ++ AR L ++R++E+ N +W RD GPT++VN+ A + GI
Sbjct: 58 NVCVAVCSHNFDRARQMLHSDVRLVEIPFNDAWMRDIGPTVLVNR--------AGERRGI 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG +G Y +W D VA + + + VLEGG+IH DGEGT TTE
Sbjct: 110 SWQFNAWGGEYNGLYDNWQQDDLVAGSVCDIIGIDYYRAPFVLEGGAIHTDGEGTLYTTE 169
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLL+ RNP L+K QIE +LKAYLG+ K+IWLP GLF DG
Sbjct: 170 ECLLSPGRNPQLSKAQIEEQLKAYLGIEKVIWLPNGLFNDETDG 213
>gi|50123193|ref|YP_052360.1| agmatine deiminase [Pectobacterium atrosepticum SCRI1043]
gi|73622161|sp|Q6CZ80.1|AGUA_ERWCT RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|49613719|emb|CAG77170.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 368
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 136/219 (62%), Gaps = 11/219 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEW PH WM WP R DNWR+ + AQ+ FA+VA AI++ PV +
Sbjct: 12 TPHQDGFAMPAEWAPHDAVWMIWPYR---TDNWREQGVPAQKTFARVAEAIAQNTPVIMG 68
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A +A+ +P N+ ++EM + +W RDTGPTIV+N QA + GIDW FN
Sbjct: 69 VPARYMADAQKVMPVNVTLVEMESDDAWMRDTGPTIVLN--------QAGERRGIDWQFN 120
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WGG G Y DW D +VA ++L + + ++LEGGSIHVDGEGT LTT ECLLN
Sbjct: 121 AWGGELGGLYEDWRQDEKVAAQVLDYHQAAGYAAPLILEGGSIHVDGEGTLLTTAECLLN 180
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
NRNPHL+K +IE ++ YL + IIWL G++ DG
Sbjct: 181 PNRNPHLSKAEIEQLMRDYLSISTIIWLEEGVYNDETDG 219
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ G+A RLAG+RLA SYVNF I+N II P D+K D A +L Q FP Y + G+
Sbjct: 288 VDSGDAVERLAGSRLAGSYVNFLISNQQIIFPLL-DEKTDDVARDLLQQMFPDYLISGVP 346
Query: 281 RAREIVLGGGNIHCITQQQP 300
AREI+LGGGNIHCITQQ P
Sbjct: 347 -AREILLGGGNIHCITQQIP 365
>gi|227113231|ref|ZP_03826887.1| agmatine deiminase [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 367
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 134/219 (61%), Gaps = 11/219 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEW PH WM WP R DNWR+ + AQ+ FA+VA AI++ PV +
Sbjct: 11 TPHQDGFAMPAEWAPHDAVWMIWPYR---TDNWRERGVPAQKTFARVAEAIAQNTPVIMG 67
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A +A+ +P N+ ++EM + +W RDTGPTIV+N G IDW FN
Sbjct: 68 VPARYMADAQKVMPVNVTLVEMESDDAWMRDTGPTIVLNSEGERRG--------IDWQFN 119
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WGG G Y DW D +VA ++L + R+ ++LEGGSIHVDGEGT LTT ECLLN
Sbjct: 120 AWGGELGGLYEDWRQDEKVAAQVLDYHQAARYAAPLILEGGSIHVDGEGTLLTTAECLLN 179
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
NRNPHL+K +IE ++ YL + IIWL G++ DG
Sbjct: 180 PNRNPHLSKAEIEQLMRDYLSISTIIWLEEGVYNDETDG 218
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ G+A RLAG+RLA SYVNF I+N II P D+K D A +L Q FP Y + G+
Sbjct: 287 VDSGDAIERLAGSRLAGSYVNFLISNQQIIFPLL-DEKTDDVARDLLQQMFPGYLISGVP 345
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ PA
Sbjct: 346 -AREILLGGGNIHCITQQIPA 365
>gi|423205406|ref|ZP_17191962.1| agmatine deiminase [Aeromonas veronii AMC34]
gi|404624201|gb|EKB21041.1| agmatine deiminase [Aeromonas veronii AMC34]
Length = 365
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/222 (48%), Positives = 135/222 (60%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TPA G+ MPAEW WM WP R DNWR AQ FAKVA AI PV
Sbjct: 6 INSTPAADGFTMPAEWAHQQAVWMIWPFR---PDNWRVAGRFAQETFAKVADAIGGATPV 62
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A E AR+ +P ++ ++EM+ + W RDTGPTIV N A + G+DW
Sbjct: 63 FMGVPAQFMEQARAIMPTHVTLVEMNSDDCWARDTGPTIVTNA--------AGECRGVDW 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG G Y W+ D +VA ++L+ + R+ ++LEGGSIHVDGEGTCLTT EC
Sbjct: 115 GFNAWGGHKGGLYYPWNQDEEVAAQMLAQHGMARYDAPLILEGGSIHVDGEGTCLTTAEC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN+NRNPHLTK QIE L+ YLGV IWL G++ DG
Sbjct: 175 LLNENRNPHLTKEQIEAHLRDYLGVTSFIWLDEGVYMDETDG 216
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ G PR A RLA SYVNF I N I+ P D DGEA R+L + FP++ VVG+
Sbjct: 285 VESGSGVPREAEGRLAGSYVNFLITNDRIVYPLL-DAATDGEAQRILEEIFPEHTVVGVP 343
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ P+
Sbjct: 344 -AREILLGGGNIHCITQQIPS 363
>gi|406678366|ref|ZP_11085542.1| agmatine deiminase [Aeromonas veronii AMC35]
gi|404622447|gb|EKB19310.1| agmatine deiminase [Aeromonas veronii AMC35]
Length = 365
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/222 (48%), Positives = 135/222 (60%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TPA G+ MPAEW WM WP R DNWR AQ FAKVA AI PV
Sbjct: 6 INSTPAADGFTMPAEWAHQQAVWMIWPFR---PDNWRVAGRFAQETFAKVADAIGGATPV 62
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A E AR+ +P ++ ++EM+ + W RDTGPTIV N A + G+DW
Sbjct: 63 FMGVPAQFMEQARAIMPAHVTLVEMNSDDCWARDTGPTIVTNA--------AGECRGVDW 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG G Y W+ D +VA ++L+ + R+ ++LEGGSIHVDGEGTCLTT EC
Sbjct: 115 GFNAWGGHKGGLYYPWNQDEEVAAQMLAQHGMARYDAPLILEGGSIHVDGEGTCLTTAEC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN+NRNPHLTK QIE L+ YLGV IWL G++ DG
Sbjct: 175 LLNENRNPHLTKEQIEAHLRDYLGVTSFIWLDEGVYMDETDG 216
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ G PR A RLA SYVNF I N I+ P D DGEA R+L + FP + V+G+
Sbjct: 285 VESGSGVPREAEGRLAGSYVNFLITNDRIVYPLL-DAATDGEAQRILEEIFPDHTVIGVP 343
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ P+
Sbjct: 344 -AREILLGGGNIHCITQQIPS 363
>gi|423201029|ref|ZP_17187609.1| agmatine deiminase [Aeromonas veronii AER39]
gi|404618012|gb|EKB14933.1| agmatine deiminase [Aeromonas veronii AER39]
Length = 365
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/222 (48%), Positives = 134/222 (60%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TPA G+ MPAEW WM WP R DNWR AQ FAKVA AI PV
Sbjct: 6 INSTPAADGFTMPAEWAHQQAVWMIWPFR---PDNWRVAGRFAQETFAKVADAIGGATPV 62
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A E AR+ +P ++ ++EM + W RDTGPTIV N A + G+DW
Sbjct: 63 FMGVPAQFMEQARTIMPAHVTLVEMDSDDCWARDTGPTIVTNA--------AGECRGVDW 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG G Y W+ D +VA ++L+ + R+ ++LEGGSIHVDGEGTCLTT EC
Sbjct: 115 GFNAWGGHKGGLYYPWNQDEEVAAQMLAQHGMARYDAPLILEGGSIHVDGEGTCLTTAEC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN+NRNPHLTK QIE L+ YLGV IWL G++ DG
Sbjct: 175 LLNENRNPHLTKEQIEAHLRDYLGVTSFIWLDEGVYMDETDG 216
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ G PR A RLA SYVNF I N I+ P D DGEA R+L + FP + VVG+
Sbjct: 285 VESGSGVPREAEGRLAGSYVNFLITNDRIVYPLL-DAATDGEAQRILEEIFPDHTVVGVP 343
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ P+
Sbjct: 344 -AREILLGGGNIHCITQQIPS 363
>gi|271502491|ref|YP_003335517.1| agmatine deiminase [Dickeya dadantii Ech586]
gi|270346046|gb|ACZ78811.1| agmatine deiminase [Dickeya dadantii Ech586]
Length = 365
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/221 (47%), Positives = 132/221 (59%), Gaps = 13/221 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWR--DDALHAQRVFAKVATAISKFEPVT 63
TP G+ MPAEW PH WM WP R DNWR D + AQR FA VA AIS+ PV
Sbjct: 6 TPLQDGFAMPAEWAPHDAVWMLWPYRR---DNWRMQGDEIPAQRTFAAVAAAISQTTPVV 62
Query: 64 VCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWN 123
+ Q A+S +P + ++EM + +W RDTGPT+V+N + G +DW
Sbjct: 63 MGVPRDQMALAKSVMPTGVTLVEMESDDAWVRDTGPTVVLNAAGERRG--------VDWQ 114
Query: 124 FNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECL 183
FN+WGG G Y DWS D VA ++L+ R+ ++LEGGSIH DGEGT LTT ECL
Sbjct: 115 FNAWGGALGGLYEDWSRDENVAAQVLAYYGDARYAAPLILEGGSIHTDGEGTLLTTAECL 174
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LN NRNPHL+K QIE L+ YLGV IWL G++ DG
Sbjct: 175 LNPNRNPHLSKAQIEQHLRDYLGVSAFIWLEEGVYNDETDG 215
>gi|116334762|ref|YP_796289.1| agmatine deiminase [Lactobacillus brevis ATCC 367]
gi|116100109|gb|ABJ65258.1| Peptidylarginine deiminase related enzyme [Lactobacillus brevis
ATCC 367]
gi|152001641|gb|ABS19477.1| agmatine deiminase [Lactobacillus brevis]
Length = 364
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 138/217 (63%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP GY MP E+EPH +M WP +R DNWR+ AQ+ FA VA AIS+FE V
Sbjct: 4 LDSTPKQDGYRMPGEFEPHQGVYMLWP---QRPDNWRNGGKPAQKTFAAVAQAISQFEHV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV + Q+ NA++ LP+N+ V+EMS + SW RD G T V+N + G+DW
Sbjct: 61 TVGVNDDQYINAKNLLPDNVEVVEMSNDDSWVRDCGATFVINDQG--------DMRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG+ DG Y W D +VA K+ E + R+ +LEGGSIHVDGEGT +TTEE
Sbjct: 113 TFNAWGGLVDGLYFPWDKDDRVAEKMTELEHVDRYRLDDFILEGGSIHVDGEGTLITTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RN L+K QIE LK +L + K+IWL RG++
Sbjct: 173 CLLSDGRNAQLSKDQIEEVLKEHLNLKKVIWLKRGIY 209
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G RLAASYVN+Y ANGGI+ P FGD D +A L + +P +VVG+ ARE++L
Sbjct: 292 PRTEGERLAASYVNYYTANGGIVFPLFGDPA-DQKAQATLEELYPDRKVVGVP-AREVLL 349
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQ P
Sbjct: 350 GGGNIHCITQQVP 362
>gi|330828429|ref|YP_004391381.1| Porphyromonas-type peptidyl-arginine deiminase [Aeromonas veronii
B565]
gi|423210884|ref|ZP_17197437.1| agmatine deiminase [Aeromonas veronii AER397]
gi|328803565|gb|AEB48764.1| Porphyromonas-type peptidyl-arginine deiminase [Aeromonas veronii
B565]
gi|404614279|gb|EKB11280.1| agmatine deiminase [Aeromonas veronii AER397]
Length = 365
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/222 (48%), Positives = 134/222 (60%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TPA G+ MPAEW WM WP R DNWR AQ FAKVA AI PV
Sbjct: 6 INSTPAADGFTMPAEWAHQQAVWMIWPFR---PDNWRVAGRFAQETFAKVADAIGGATPV 62
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A E AR+ +P ++ ++EM + W RDTGPTIV N A + G+DW
Sbjct: 63 FMGVPAQFMEQARAIMPAHVTLVEMDSDDCWARDTGPTIVTNA--------AGECRGVDW 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG G Y W+ D +VA ++L+ + R+ ++LEGGSIHVDGEGTCLTT EC
Sbjct: 115 GFNAWGGHKGGLYYPWNQDEEVAAQMLAQHGMARYDAPLILEGGSIHVDGEGTCLTTAEC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN+NRNPHLTK QIE L+ YLGV IWL G++ DG
Sbjct: 175 LLNENRNPHLTKEQIEAYLRDYLGVTSFIWLDEGVYMDETDG 216
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ G PR A RLA SYVNF I N I+ P D DGEA R+L + FP++ V+G+
Sbjct: 285 VESGSGVPREAEGRLAGSYVNFLITNDRIVYPLL-DAATDGEAQRILEEIFPEHTVIGVP 343
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ P+
Sbjct: 344 -AREILLGGGNIHCITQQIPS 363
>gi|227508411|ref|ZP_03938460.1| agmatine deiminase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
gi|227511418|ref|ZP_03941467.1| agmatine deiminase [Lactobacillus buchneri ATCC 11577]
gi|227085369|gb|EEI20681.1| agmatine deiminase [Lactobacillus buchneri ATCC 11577]
gi|227192061|gb|EEI72128.1| agmatine deiminase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
Length = 365
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 137/217 (63%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ +P G+ MP E+E H ++ WP ER DNWR+ A AQ F VA AIS+FE V
Sbjct: 4 LQSSPKKDGFRMPGEFEHHKGVYILWP---ERPDNWRNGAKPAQHTFVNVAKAISQFEHV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV S Q+ NAR LP+ + V+EMS + SW RD GPT V N++ + G+DW
Sbjct: 61 TVGVSDEQFANARHMLPDEVEVVEMSNDDSWIRDCGPTFVTNENG--------DLRGVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG+ DG Y W D +VA+K+ E R+ +LEGGSIHVDGEGT +TTEE
Sbjct: 113 TFNAWGGLVDGLYFPWDKDDRVAQKVTELEHADRYRLDDFILEGGSIHVDGEGTLITTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL++ RN L+K QIEN LK YL + K+IWL RG++
Sbjct: 173 CLLSEGRNSQLSKEQIENVLKEYLNLDKVIWLKRGIY 209
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G RLAASYVN+Y ANGGI+ P+FGD D +A L + +P ++VG+ AREI+L
Sbjct: 292 PRQEGDRLAASYVNYYTANGGIVFPEFGDPN-DEKAKETLQRLYPDRQIVGVP-AREILL 349
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQ PA
Sbjct: 350 GGGNIHCITQQVPA 363
>gi|254420970|ref|ZP_05034694.1| Porphyromonas-type peptidyl-arginine deiminase family
[Brevundimonas sp. BAL3]
gi|196187147|gb|EDX82123.1| Porphyromonas-type peptidyl-arginine deiminase family
[Brevundimonas sp. BAL3]
Length = 859
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/222 (51%), Positives = 138/222 (62%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MPAEWEPH CWM WP ER DNWR A AQ FA VA AI++ EPV
Sbjct: 490 LDTTPRADGFRMPAEWEPHIGCWMLWP---ERSDNWRGGAKPAQHAFAAVAAAIAEGEPV 546
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVC S AQ+ AR+ L +RV+EM+ N SW RD GPT VVN V G+DW
Sbjct: 547 TVCVSPAQYVIARAMLAPTVRVVEMTSNDSWIRDCGPTFVVNDQGV--------VRGVDW 598
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG+ DG Y W D V K++ ER R+ VLEGGSI VDGEGT L TEEC
Sbjct: 599 KFNAWGGLTDGLYFPWDQDDLVGEKVIELERDDRYAPDFVLEGGSIDVDGEGTVLATEEC 658
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNP T+ +IE L+ YLGV ++WL G++ DG
Sbjct: 659 LLNPNRNPGKTREEIEQSLRDYLGVETVLWLEHGVYLDETDG 700
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G R+AASY NFYIAN ++ P FGD + D A+ L++ FP ++ + AREI+L
Sbjct: 777 PREPGDRMAASYANFYIANAVVVAPAFGDPQ-DAPAMETLARLFPNRRILSVP-AREILL 834
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQ+P
Sbjct: 835 GGGNIHCITQQEP 847
>gi|386826305|ref|ZP_10113412.1| agmatine deiminase [Beggiatoa alba B18LD]
gi|386427189|gb|EIJ41017.1| agmatine deiminase [Beggiatoa alba B18LD]
Length = 337
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/350 (38%), Positives = 175/350 (50%), Gaps = 72/350 (20%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEW PHS+CWM +P R + W DD A+R +A+VA AI++FEPVT+
Sbjct: 3 TPKKEGFFMPAEWHPHSRCWMAYPCR---VGVW-DDLDVARRAYAQVAQAIARFEPVTML 58
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A +A+ + V+EM ++ SW RD PT V++ K+AG+DW FN
Sbjct: 59 TPAEFIADAQKVCGSTVSVMEMGLDDSWTRDMAPTFVIHPDG--------KLAGVDWEFN 110
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECL-- 183
+WG Y + D VA K+L+ + RF ++LEGGSIHVDGEGT LTTEECL
Sbjct: 111 AWGRK----YETYDTDALVAEKLLAQTNIQRFIAPLILEGGSIHVDGEGTVLTTEECLLN 166
Query: 184 -------------------LNKNRNPHLTKGQIENELKAYL---------GVMKII---- 211
LN + L KG +E ++ GV+ I
Sbjct: 167 PNRNPQLSKAEIESYLCEYLNVTKVIWLEKGLKYDETDGHIDEVACFVRPGVVMAITTND 226
Query: 212 -------WLPRGLFGMIHDGEAKPRLA--------------GTRLAASYVNFYIANGGII 250
L L + +AK R G RL SY+NFYIANGGI+
Sbjct: 227 PTDENYAILQANLKKLRSSTDAKGRPLEVIEIEQPSPQYHRGARLTLSYINFYIANGGIV 286
Query: 251 TPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
F D K+D A + +AFP +E+V I A +I GGG IHCITQQQP
Sbjct: 287 MAAFNDAKYDALAYEAMRKAFPSHEIVQIP-ALDIFKGGGGIHCITQQQP 335
>gi|404409279|ref|YP_006694867.1| agmatine deiminase [Listeria monocytogenes SLCC5850]
gi|404229105|emb|CBY50509.1| agmatine deiminase [Listeria monocytogenes SLCC5850]
Length = 363
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 136/213 (63%), Gaps = 12/213 (5%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
P G+ MP E+EPH C+M WP ER DNWR AQ+ + +VA AIS FEPVT+
Sbjct: 2 PVEDGFRMPGEYEPHIGCFMIWP---ERPDNWRLGGKPAQQNYKEVAVAISNFEPVTMFV 58
Query: 67 SAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
S Q++NAR +LP+ IRVIEMS + +W RD GP+ +V+ + G+DW FN+
Sbjct: 59 SPNQYKNARKELPDTIRVIEMSNDDAWIRDYGPSFLVDDKG--------DMRGVDWGFNA 110
Query: 127 WGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTEECLLN 185
WGG+ DG Y W D Q+A+K+ ER+ + +LEG SIHVDGEGT +TTEECLL+
Sbjct: 111 WGGLLDGLYFPWDKDNQIAKKVCELERIDYYSQKDFILEGCSIHVDGEGTLVTTEECLLS 170
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
+ RNP+LTK +IE LK Y K+IWL G +
Sbjct: 171 EGRNPNLTKIEIEQTLKKYFHAQKVIWLKHGFY 203
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR AG RLAASYVN+Y ANG II P F D K D +A +L + +P ++VGI +AREI+L
Sbjct: 286 PRQAGDRLAASYVNYYTANGAIIFPLFDDPK-DKDAQELLEKLYPDRKIVGI-KAREILL 343
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQ P
Sbjct: 344 GGGNIHCITQHLP 356
>gi|421081825|ref|ZP_15542732.1| Agmatine deiminase 2 [Pectobacterium wasabiae CFBP 3304]
gi|401703433|gb|EJS93649.1| Agmatine deiminase 2 [Pectobacterium wasabiae CFBP 3304]
Length = 367
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 135/219 (61%), Gaps = 11/219 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEW PH WM WP R DNWR+ + AQ+ FA+VA AI++ PV +
Sbjct: 11 TPHQDGFAMPAEWAPHDAVWMLWPYR---TDNWREQGVPAQKTFARVAEAIAQNTPVIMG 67
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A +A+ +P N+ ++E+ + +W RDTGPTIV+N QA + GIDW FN
Sbjct: 68 VPARYMADAQKVMPVNVTLLEIESDDAWMRDTGPTIVLN--------QAGERRGIDWQFN 119
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WGG G Y DW D VA ++L + R+ ++LEGGSIHVDGEGT LTT ECLLN
Sbjct: 120 AWGGELGGLYEDWRQDENVAAQVLDYHQAARYAVPLILEGGSIHVDGEGTLLTTAECLLN 179
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
NRNPHL K +IE ++ YL + IIWL G++ DG
Sbjct: 180 PNRNPHLGKAEIEQLMRDYLSISTIIWLEEGVYNDETDG 218
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ G+A RLAG+RLA SYVNF I+N I+ P D++ D A +L Q FP Y + G+
Sbjct: 287 VDSGDAVERLAGSRLAGSYVNFLISNQQIVFPLL-DERTDDVARDLLRQMFPGYVISGVP 345
Query: 281 RAREIVLGGGNIHCITQQQPAI 302
AREI+LGGGNIHCITQQ P +
Sbjct: 346 -AREILLGGGNIHCITQQIPTV 366
>gi|375111014|ref|ZP_09757227.1| agmatine deiminase [Alishewanella jeotgali KCTC 22429]
gi|374568911|gb|EHR40081.1| agmatine deiminase [Alishewanella jeotgali KCTC 22429]
Length = 370
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 140/230 (60%), Gaps = 21/230 (9%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MP EW PH Q WM WP ER D+WR A AQ F V AI+ FEPV
Sbjct: 5 LTSTPKQDGFSMPPEWAPHKQTWMIWP---ERTDSWRLGAKPAQAAFVTVIKAIAGFEPV 61
Query: 63 TVCASAAQ-------WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAP 115
+V SAAQ A ++ P IRV+E+S N +W RDTGPT V N
Sbjct: 62 SVGVSAAQYANAYAQLSQANTKFP--IRVVEISNNDAWCRDTGPTFVTNGKG-------- 111
Query: 116 KVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEG 174
+V G+DW FN+WGG++ G Y W D QVA KIL E+LPR+ VLEGG+IHVDGEG
Sbjct: 112 QVRGVDWTFNAWGGLNGGLYFPWDRDDQVASKILGIEQLPRYRTEGFVLEGGAIHVDGEG 171
Query: 175 TCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
T LTT ECLLN NRNPHL++ QIE L+ +L + K++WL G+F DG
Sbjct: 172 TLLTTAECLLNANRNPHLSREQIEAMLREHLAIEKVLWLEDGIFNDETDG 221
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
A PR A RLA SY+NFY+ NGG+I P F D D A +L Q FP ++VV + REI
Sbjct: 296 AIPREANARLAGSYINFYLCNGGLILPTFDDPN-DQIAAEILQQLFPAHQVVTVP-GREI 353
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHCITQQQPA
Sbjct: 354 LLGGGNIHCITQQQPA 369
>gi|393762749|ref|ZP_10351375.1| agmatine deiminase [Alishewanella agri BL06]
gi|392606371|gb|EIW89256.1| agmatine deiminase [Alishewanella agri BL06]
Length = 370
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 140/230 (60%), Gaps = 21/230 (9%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MP EW PH Q WM WP ER D+WR A AQ F V AI+ FEPV
Sbjct: 5 LTSTPKQDGFSMPPEWAPHKQTWMIWP---ERTDSWRLGAKPAQAAFVTVIKAIAGFEPV 61
Query: 63 TVCASAAQ-------WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAP 115
+V SAAQ A ++ P IRV+E+S N +W RDTGPT V N
Sbjct: 62 SVGVSAAQYANAYAQLSQANTKFP--IRVVEISNNDAWCRDTGPTFVTNGKG-------- 111
Query: 116 KVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEG 174
+V G+DW FN+WGG++ G Y W D QVA KIL E+LPR+ VLEGG+IHVDGEG
Sbjct: 112 EVRGVDWTFNAWGGLNGGLYFPWDRDDQVASKILGIEQLPRYRTEGFVLEGGAIHVDGEG 171
Query: 175 TCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
T LTT ECLLN NRNPHL++ QIE L+ +L + K++WL G+F DG
Sbjct: 172 TLLTTAECLLNANRNPHLSREQIEAMLREHLAIEKVLWLEDGIFNDETDG 221
>gi|357235582|ref|ZP_09122925.1| putative agmatine deiminase [Streptococcus criceti HS-6]
gi|356883564|gb|EHI73764.1| putative agmatine deiminase [Streptococcus criceti HS-6]
Length = 325
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 107/213 (50%), Positives = 139/213 (65%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAE+EP Q WM WP ER DNWR A AQ+ F VATAIS+FEPVT+C
Sbjct: 9 TPKQDGFRMPAEFEPQKQIWMVWP---ERPDNWRWGAKPAQKTFVNVATAISQFEPVTMC 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
+ +Q++NAR+QLP +RVIE++ + SW RD+GPT VVN ++ DW FN
Sbjct: 66 VNPSQYQNARAQLPSQVRVIEIASDDSWGRDSGPTFVVNDRG--------QMRANDWTFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W D QVA+KI E + + VLEGGSI VD EGT +TTE CL+
Sbjct: 118 AWGGLVDGLYFPWDKDDQVAQKICEIEGVDSYRTDDFVLEGGSITVDREGTLITTEMCLI 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
+ RNP +TK +IE +LK +L + KIIW+ G+
Sbjct: 178 SPGRNPSMTKEEIEAKLKNHLNLEKIIWIKDGI 210
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 21/33 (63%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWD 260
PR G ASY+NF I NGGII PQ+GD D
Sbjct: 293 PREEGEISIASYMNFLIVNGGIILPQYGDNNDD 325
>gi|418362907|ref|ZP_12963525.1| agmatine deiminase [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|356685913|gb|EHI50532.1| agmatine deiminase [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 365
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 105/222 (47%), Positives = 136/222 (61%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TPA G+ MPAEW WM WP R DNWR+ AQ FAKVA AI + PV
Sbjct: 6 IDSTPAADGFTMPAEWAHQQAVWMIWPFR---PDNWREAGRFAQATFAKVADAIGQATPV 62
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A E AR+ +P ++ ++EM+ + W RDTGPT+V N A + G+DW
Sbjct: 63 FMGVPAQFMEQARAIMPAHVTLVEMASDDCWARDTGPTVVTNA--------AGECRGVDW 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG G Y W D +VA ++L+ + R+ ++LEGGSIHVDGEGTC+TT EC
Sbjct: 115 GFNAWGGHKGGLYYPWDQDEKVAAQMLAQHGMDRYDAPLILEGGSIHVDGEGTCMTTAEC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN+NRNPHLTK QIE L+ YLGV IWL G++ DG
Sbjct: 175 LLNENRNPHLTKDQIEAYLRDYLGVKSFIWLNEGVYMDETDG 216
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ G PR A RLA SYVNF I N I+ P D DGEA R+L + FP+++VVG+
Sbjct: 285 VESGTGVPREAQGRLAGSYVNFLITNDRIVYPLL-DAAIDGEAQRILEEIFPEHKVVGVP 343
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ P+
Sbjct: 344 -AREILLGGGNIHCITQQIPS 363
>gi|375265677|ref|YP_005023120.1| hypothetical protein VEJY3_08270 [Vibrio sp. EJY3]
gi|369840998|gb|AEX22142.1| hypothetical protein VEJY3_08270 [Vibrio sp. EJY3]
Length = 360
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 138/224 (61%), Gaps = 11/224 (4%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M+++ TPA G+ PAE++P S+ W+ WP ER DNWRD A+ AQ FA++A AI
Sbjct: 1 MKLSTTPAQDGFYFPAEFQPVSEVWLAWP---ERRDNWRDGAVPAQETFARIANAIVDVT 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
V+V + ++ AR L ++R++E+ N +W RD GPT+VVN++ G I
Sbjct: 58 KVSVAVCSHNFDRARKLLHPDVRLVEIPFNDAWMRDIGPTVVVNQTGDRRG--------I 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG +G Y +W D VA + + + VLEGGSIH DGEGT TTE
Sbjct: 110 SWKFNAWGGEYNGLYENWQQDDLVAGSVCDIIGIDYYRAPFVLEGGSIHTDGEGTLYTTE 169
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLL+ RNPHL+K +IE +LK YLG+ K+IW+P GLF DG
Sbjct: 170 ECLLSPGRNPHLSKTEIEEQLKVYLGIEKVIWVPNGLFNDETDG 213
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 22/171 (12%)
Query: 149 LSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP----HLTKGQIENELKAY 204
L E++ P+ + + HVD + + +L+ +P + Q E LK+
Sbjct: 194 LGIEKVIWVPNGLFNDETDGHVDNLLHVIAPGKVVLSWTDDPSDPQYELSRQAEKALKSQ 253
Query: 205 LGV----MKIIWLPRGLFGMIHDGEAK----------PRLAGTRLAASYVNFYIANGGII 250
++I+ LP + G +H EA+ R AG RL+ASY NF I N +
Sbjct: 254 QDAKGRDIEIVRLP--IPGPLHYSEAEANGIDASAGMSRQAGERLSASYANFLIVNDHVF 311
Query: 251 TPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
P D++ D A+ +L A P+++++ I +RE++LGGGNIHCITQQ PA
Sbjct: 312 LPML-DEETDAIAIEILQNAMPEHQIIAIP-SREVLLGGGNIHCITQQIPA 360
>gi|397169682|ref|ZP_10493114.1| agmatine deiminase [Alishewanella aestuarii B11]
gi|396088986|gb|EJI86564.1| agmatine deiminase [Alishewanella aestuarii B11]
Length = 370
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 139/230 (60%), Gaps = 21/230 (9%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MP EW PH Q WM WP ER D+WR A AQ F V AI+ FEPV
Sbjct: 5 LTSTPKQDGFSMPPEWAPHKQTWMIWP---ERTDSWRLGAKPAQAAFVTVIKAIAGFEPV 61
Query: 63 TVCASAAQ-------WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAP 115
+V SAAQ A ++ P IRV+E+S N +W RDTGPT V N
Sbjct: 62 SVGVSAAQYANAYAQLNQANTKFP--IRVVEISNNDAWCRDTGPTFVTNGKG-------- 111
Query: 116 KVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEG 174
+V G+DW FN+WGG++ G Y W D QVA KIL E LPR+ VLEGG+IHVDGEG
Sbjct: 112 EVRGVDWTFNAWGGLNGGLYFPWDRDDQVASKILGIEELPRYRTEGFVLEGGAIHVDGEG 171
Query: 175 TCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
T LTT ECLLN NRNPHL++ QIE L+ +L + K++WL G+F DG
Sbjct: 172 TLLTTAECLLNANRNPHLSREQIEAMLREHLAIEKVLWLEDGIFNDETDG 221
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
A PR A RLA SY+NFY+ NGG+I P F D D A +L Q FP ++VV + REI
Sbjct: 296 AIPREANARLAGSYINFYLCNGGLILPTFDDPN-DQVAAEILQQLFPAHQVVTVP-GREI 353
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHCITQQQPA
Sbjct: 354 LLGGGNIHCITQQQPA 369
>gi|257868590|ref|ZP_05648243.1| agmatine deiminase [Enterococcus gallinarum EG2]
gi|357049491|ref|ZP_09110711.1| agmatine deiminase [Enterococcus saccharolyticus 30_1]
gi|257802754|gb|EEV31576.1| agmatine deiminase [Enterococcus gallinarum EG2]
gi|355383334|gb|EHG30418.1| agmatine deiminase [Enterococcus saccharolyticus 30_1]
Length = 365
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/213 (48%), Positives = 131/213 (61%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+EP + WM WP ER DNWRD AQ FA+VA AISKF P+ V
Sbjct: 9 TPKQDGFRMPGEFEPQEKVWMIWP---ERPDNWRDGGKPAQEAFAEVAKAISKFTPMNVV 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S Q++N R QLP +I V EMS N +W RD GP+ V+N ++ G DW FN
Sbjct: 66 VSQQQYQNCRRQLPADITVYEMSNNDAWIRDCGPSFVINDKG--------ELRGNDWGFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W D VA+KI E++ + +LEGGS HVDGEGT LTTE CLL
Sbjct: 118 AWGGLVDGLYFPWDQDDLVAQKICEIEQVDSYRTEGFILEGGSFHVDGEGTVLTTEMCLL 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
+ RNPH+TK +IE +L YL K++WL G+
Sbjct: 178 SDGRNPHMTKAEIEQKLCDYLNCEKVLWLADGI 210
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I N G+I PQ+GD+ D A+ +++ FP EVVG+ EIV
Sbjct: 293 PREDGDICIASYMNFLITNNGVIVPQYGDEN-DARALEEIAEIFPDKEVVGVNTV-EIVY 350
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQQP
Sbjct: 351 GGGNIHCITQQQP 363
>gi|119775653|ref|YP_928393.1| agmatine deiminase [Shewanella amazonensis SB2B]
gi|119768153|gb|ABM00724.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 375
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/222 (47%), Positives = 135/222 (60%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TPA G+ MPAEW WM WP R DNWR+ AQ FAKVA AI PV
Sbjct: 16 LNSTPAADGFTMPAEWAHQQAVWMIWPYR---PDNWREAGRFAQATFAKVADAIGGATPV 72
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A + AR+ +P ++ ++EM+ + W RDTGPT+V N A + GIDW
Sbjct: 73 FMGVPAEFMDKARAIMPAHVTLVEMNSDDCWARDTGPTVVTNG--------AGECRGIDW 124
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG G Y W D +VA ++L+ + R+ ++LEGGSIHVDGEGTC+TT EC
Sbjct: 125 GFNAWGGHKGGLYFPWDQDEKVAAQMLAQHGMDRYAAPLILEGGSIHVDGEGTCMTTAEC 184
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN+NRNPHLTK QIE L+ YLGV IWL G++ DG
Sbjct: 185 LLNENRNPHLTKEQIEAHLRDYLGVTSFIWLGDGVYMDETDG 226
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ G PR A RLA SYVNF I N I+ P D+ DGEA R+L FP+Y+V+G+
Sbjct: 295 VESGTGVPREAEGRLAGSYVNFLITNDRIVYPLL-DEATDGEAQRILEDIFPEYQVIGVP 353
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ P+
Sbjct: 354 -AREILLGGGNIHCITQQIPS 373
>gi|238787369|ref|ZP_04631168.1| agmatine deiminase [Yersinia frederiksenii ATCC 33641]
gi|238724631|gb|EEQ16272.1| agmatine deiminase [Yersinia frederiksenii ATCC 33641]
Length = 374
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/222 (45%), Positives = 132/222 (59%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++GTP G+ MPAEW WM WP R DNWR + AQ+ FAKVA AIS+ PV
Sbjct: 14 LSGTPLQDGFFMPAEWAKQDAVWMLWPYRQ---DNWRGKGIPAQQTFAKVAEAISRTTPV 70
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A++ LP N+ ++EM+ + +W RDTGPT+V+NK+ +DW
Sbjct: 71 FMGVPAEFMTQAKATLPANVTLVEMASDDAWMRDTGPTMVINKAGERRA--------VDW 122
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG++ G Y DW D +VA + + +VLEGGSIH DGEGT LTT EC
Sbjct: 123 QFNAWGGLNGGLYSDWQQDEKVAVHVSDFLNNAHYSAPLVLEGGSIHTDGEGTLLTTAEC 182
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNPHL + QIE L+ YLGV IWL G++ DG
Sbjct: 183 LLNPNRNPHLNQAQIEQLLREYLGVTHFIWLQDGVYNDETDG 224
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 225 EAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERARE 284
+A PR AG RLA SYVNF I+N II P D + DG A +L Q FP Y +VG+ ARE
Sbjct: 297 DAVPRTAGERLAGSYVNFLISNQQIIYPLL-DSRTDGLAQDLLQQMFPDYAIVGVP-ARE 354
Query: 285 IVLGGGNIHCITQQQPAI 302
I+LGGGNIHCITQQ PA+
Sbjct: 355 ILLGGGNIHCITQQIPAL 372
>gi|186896644|ref|YP_001873756.1| agmatine deiminase [Yersinia pseudotuberculosis PB1/+]
gi|186699670|gb|ACC90299.1| agmatine deiminase [Yersinia pseudotuberculosis PB1/+]
Length = 371
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 134/222 (60%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ GTP G+ MPAEW P WM WP R DNWR A+ AQ+ FAKVA AIS+ PV
Sbjct: 13 LPGTPRQDGFFMPAEWAPQDAVWMLWPYRQ---DNWRGKAIPAQQTFAKVAEAISRATPV 69
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A++ +P N+ ++EM+ + +W RDTGPT+V+N ++ +DW
Sbjct: 70 FMGVPAEFMAQAKATMPANVTLVEMASDDAWMRDTGPTMVINGAAERRA--------VDW 121
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG++ G Y DW D +VA ++ + + ++LEGGSIH DGEGT LTT EC
Sbjct: 122 QFNAWGGLNGGLYADWQQDEKVAVQVSDFLKNAHYSAPLILEGGSIHTDGEGTLLTTAEC 181
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNPHL + QIE L YLGV IWL G++ DG
Sbjct: 182 LLNPNRNPHLNQAQIEQLLCDYLGVTHFIWLQDGVYNDETDG 223
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 225 EAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERARE 284
+A PR AG RLA SYVNF I+N II P D + DG+A +L + FP Y +VG+ ARE
Sbjct: 296 DAVPRTAGERLAGSYVNFLISNQQIIFPLL-DSRTDGQANDLLQKMFPGYAIVGVP-ARE 353
Query: 285 IVLGGGNIHCITQQQPA 301
I+LGGGNIHCITQQ PA
Sbjct: 354 ILLGGGNIHCITQQIPA 370
>gi|45443241|ref|NP_994780.1| agmatine deiminase [Yersinia pestis biovar Microtus str. 91001]
gi|51597521|ref|YP_071712.1| agmatine deiminase [Yersinia pseudotuberculosis IP 32953]
gi|108806323|ref|YP_650239.1| agmatine deiminase [Yersinia pestis Antiqua]
gi|108813296|ref|YP_649063.1| agmatine deiminase [Yersinia pestis Nepal516]
gi|145597883|ref|YP_001161959.1| agmatine deiminase [Yersinia pestis Pestoides F]
gi|149367052|ref|ZP_01889085.1| putative agmatine deiminase [Yersinia pestis CA88-4125]
gi|162418230|ref|YP_001607681.1| agmatine deiminase [Yersinia pestis Angola]
gi|165925008|ref|ZP_02220840.1| agmatine deiminase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165937240|ref|ZP_02225804.1| agmatine deiminase [Yersinia pestis biovar Orientalis str. IP275]
gi|166010397|ref|ZP_02231295.1| agmatine deiminase [Yersinia pestis biovar Antiqua str. E1979001]
gi|166212697|ref|ZP_02238732.1| agmatine deiminase [Yersinia pestis biovar Antiqua str. B42003004]
gi|167399804|ref|ZP_02305322.1| agmatine deiminase [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167422047|ref|ZP_02313800.1| agmatine deiminase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167426707|ref|ZP_02318460.1| agmatine deiminase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167468158|ref|ZP_02332862.1| agmatine deiminase [Yersinia pestis FV-1]
gi|170023083|ref|YP_001719588.1| agmatine deiminase [Yersinia pseudotuberculosis YPIII]
gi|218928111|ref|YP_002345986.1| agmatine deiminase [Yersinia pestis CO92]
gi|229837631|ref|ZP_04457793.1| Agmatine deiminase [Yersinia pestis Pestoides A]
gi|229840858|ref|ZP_04461017.1| Agmatine deiminase [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229842582|ref|ZP_04462737.1| Agmatine deiminase [Yersinia pestis biovar Orientalis str. India
195]
gi|229903759|ref|ZP_04518872.1| Agmatine deiminase [Yersinia pestis Nepal516]
gi|270487537|ref|ZP_06204611.1| agmatine deiminase [Yersinia pestis KIM D27]
gi|294502898|ref|YP_003566960.1| hypothetical protein YPZ3_0788 [Yersinia pestis Z176003]
gi|384121337|ref|YP_005503957.1| hypothetical protein YPD4_0745 [Yersinia pestis D106004]
gi|384125209|ref|YP_005507823.1| hypothetical protein YPD8_0740 [Yersinia pestis D182038]
gi|384137066|ref|YP_005519768.1| agmatine deiminase [Yersinia pestis A1122]
gi|384413475|ref|YP_005622837.1| Agmatine deiminase [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|420545476|ref|ZP_15043606.1| agmatine deiminase [Yersinia pestis PY-01]
gi|420556287|ref|ZP_15053226.1| agmatine deiminase [Yersinia pestis PY-03]
gi|420561891|ref|ZP_15058130.1| agmatine deiminase [Yersinia pestis PY-04]
gi|420566920|ref|ZP_15062670.1| agmatine deiminase [Yersinia pestis PY-05]
gi|420572567|ref|ZP_15067798.1| agmatine deiminase [Yersinia pestis PY-06]
gi|420577914|ref|ZP_15072636.1| agmatine deiminase [Yersinia pestis PY-07]
gi|420583250|ref|ZP_15077490.1| agmatine deiminase [Yersinia pestis PY-08]
gi|420588399|ref|ZP_15082136.1| agmatine deiminase [Yersinia pestis PY-09]
gi|420593715|ref|ZP_15086926.1| agmatine deiminase [Yersinia pestis PY-10]
gi|420604883|ref|ZP_15096907.1| agmatine deiminase [Yersinia pestis PY-12]
gi|420610235|ref|ZP_15101755.1| agmatine deiminase [Yersinia pestis PY-13]
gi|420615511|ref|ZP_15106436.1| agmatine deiminase [Yersinia pestis PY-14]
gi|420626001|ref|ZP_15115795.1| agmatine deiminase [Yersinia pestis PY-16]
gi|420631178|ref|ZP_15120479.1| agmatine deiminase [Yersinia pestis PY-19]
gi|420636286|ref|ZP_15125049.1| agmatine deiminase [Yersinia pestis PY-25]
gi|420641886|ref|ZP_15130101.1| agmatine deiminase [Yersinia pestis PY-29]
gi|420647005|ref|ZP_15134792.1| agmatine deiminase [Yersinia pestis PY-32]
gi|420652656|ref|ZP_15139869.1| agmatine deiminase [Yersinia pestis PY-34]
gi|420658163|ref|ZP_15144819.1| agmatine deiminase [Yersinia pestis PY-36]
gi|420663477|ref|ZP_15149575.1| agmatine deiminase [Yersinia pestis PY-42]
gi|420668476|ref|ZP_15154098.1| agmatine deiminase [Yersinia pestis PY-45]
gi|420673764|ref|ZP_15158909.1| agmatine deiminase [Yersinia pestis PY-46]
gi|420679306|ref|ZP_15163941.1| agmatine deiminase [Yersinia pestis PY-47]
gi|420684538|ref|ZP_15168638.1| agmatine deiminase [Yersinia pestis PY-48]
gi|420695539|ref|ZP_15178317.1| agmatine deiminase [Yersinia pestis PY-53]
gi|420700876|ref|ZP_15182911.1| agmatine deiminase [Yersinia pestis PY-54]
gi|420706932|ref|ZP_15187798.1| agmatine deiminase [Yersinia pestis PY-55]
gi|420712233|ref|ZP_15192585.1| agmatine deiminase [Yersinia pestis PY-56]
gi|420717605|ref|ZP_15197309.1| agmatine deiminase [Yersinia pestis PY-58]
gi|420723224|ref|ZP_15202130.1| agmatine deiminase [Yersinia pestis PY-59]
gi|420728872|ref|ZP_15207166.1| agmatine deiminase [Yersinia pestis PY-60]
gi|420733930|ref|ZP_15211723.1| agmatine deiminase [Yersinia pestis PY-61]
gi|420739386|ref|ZP_15216646.1| agmatine deiminase [Yersinia pestis PY-63]
gi|420744695|ref|ZP_15221340.1| agmatine deiminase [Yersinia pestis PY-64]
gi|420750519|ref|ZP_15226297.1| agmatine deiminase [Yersinia pestis PY-65]
gi|420755715|ref|ZP_15230849.1| agmatine deiminase [Yersinia pestis PY-66]
gi|420761648|ref|ZP_15235651.1| agmatine deiminase [Yersinia pestis PY-71]
gi|420771877|ref|ZP_15244860.1| agmatine deiminase [Yersinia pestis PY-76]
gi|420777242|ref|ZP_15249670.1| agmatine deiminase [Yersinia pestis PY-88]
gi|420788162|ref|ZP_15259251.1| agmatine deiminase [Yersinia pestis PY-90]
gi|420793646|ref|ZP_15264197.1| agmatine deiminase [Yersinia pestis PY-91]
gi|420798760|ref|ZP_15268802.1| agmatine deiminase [Yersinia pestis PY-92]
gi|420804109|ref|ZP_15273612.1| agmatine deiminase [Yersinia pestis PY-93]
gi|420809355|ref|ZP_15278363.1| agmatine deiminase [Yersinia pestis PY-94]
gi|420815100|ref|ZP_15283515.1| agmatine deiminase [Yersinia pestis PY-95]
gi|420820229|ref|ZP_15288155.1| agmatine deiminase [Yersinia pestis PY-96]
gi|420825324|ref|ZP_15292711.1| agmatine deiminase [Yersinia pestis PY-98]
gi|420835950|ref|ZP_15302303.1| agmatine deiminase [Yersinia pestis PY-100]
gi|420846709|ref|ZP_15312039.1| agmatine deiminase [Yersinia pestis PY-102]
gi|420852114|ref|ZP_15316810.1| agmatine deiminase [Yersinia pestis PY-103]
gi|420857633|ref|ZP_15321495.1| agmatine deiminase [Yersinia pestis PY-113]
gi|421762383|ref|ZP_16199181.1| agmatine deiminase [Yersinia pestis INS]
gi|45438109|gb|AAS63657.1| Peptidylarginine deiminase and related enzymes [Yersinia pestis
biovar Microtus str. 91001]
gi|51590803|emb|CAH22449.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|108776944|gb|ABG19463.1| hypothetical protein YPN_3136 [Yersinia pestis Nepal516]
gi|108778236|gb|ABG12294.1| hypothetical protein YPA_0326 [Yersinia pestis Antiqua]
gi|115346722|emb|CAL19605.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|145209579|gb|ABP38986.1| hypothetical protein YPDSF_0576 [Yersinia pestis Pestoides F]
gi|149290666|gb|EDM40742.1| putative agmatine deiminase [Yersinia pestis CA88-4125]
gi|162351045|gb|ABX84993.1| agmatine deiminase [Yersinia pestis Angola]
gi|165914714|gb|EDR33327.1| agmatine deiminase [Yersinia pestis biovar Orientalis str. IP275]
gi|165923208|gb|EDR40359.1| agmatine deiminase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165990883|gb|EDR43184.1| agmatine deiminase [Yersinia pestis biovar Antiqua str. E1979001]
gi|166205989|gb|EDR50469.1| agmatine deiminase [Yersinia pestis biovar Antiqua str. B42003004]
gi|166960184|gb|EDR56205.1| agmatine deiminase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167050512|gb|EDR61920.1| agmatine deiminase [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167054310|gb|EDR64129.1| agmatine deiminase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169749617|gb|ACA67135.1| agmatine deiminase [Yersinia pseudotuberculosis YPIII]
gi|229679529|gb|EEO75632.1| Agmatine deiminase [Yersinia pestis Nepal516]
gi|229690892|gb|EEO82946.1| Agmatine deiminase [Yersinia pestis biovar Orientalis str. India
195]
gi|229697224|gb|EEO87271.1| Agmatine deiminase [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229704319|gb|EEO91330.1| Agmatine deiminase [Yersinia pestis Pestoides A]
gi|262360933|gb|ACY57654.1| hypothetical protein YPD4_0745 [Yersinia pestis D106004]
gi|262364873|gb|ACY61430.1| hypothetical protein YPD8_0740 [Yersinia pestis D182038]
gi|270336041|gb|EFA46818.1| agmatine deiminase [Yersinia pestis KIM D27]
gi|294353357|gb|ADE63698.1| hypothetical protein YPZ3_0788 [Yersinia pestis Z176003]
gi|320013979|gb|ADV97550.1| Agmatine deiminase [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|342852195|gb|AEL70748.1| agmatine deiminase [Yersinia pestis A1122]
gi|391431164|gb|EIQ92773.1| agmatine deiminase [Yersinia pestis PY-01]
gi|391434398|gb|EIQ95595.1| agmatine deiminase [Yersinia pestis PY-03]
gi|391447032|gb|EIR06992.1| agmatine deiminase [Yersinia pestis PY-04]
gi|391447779|gb|EIR07658.1| agmatine deiminase [Yersinia pestis PY-05]
gi|391451095|gb|EIR10621.1| agmatine deiminase [Yersinia pestis PY-06]
gi|391463147|gb|EIR21580.1| agmatine deiminase [Yersinia pestis PY-07]
gi|391464241|gb|EIR22545.1| agmatine deiminase [Yersinia pestis PY-08]
gi|391466442|gb|EIR24510.1| agmatine deiminase [Yersinia pestis PY-09]
gi|391480048|gb|EIR36762.1| agmatine deiminase [Yersinia pestis PY-10]
gi|391480885|gb|EIR37470.1| agmatine deiminase [Yersinia pestis PY-12]
gi|391495249|gb|EIR50368.1| agmatine deiminase [Yersinia pestis PY-13]
gi|391499258|gb|EIR53899.1| agmatine deiminase [Yersinia pestis PY-14]
gi|391511061|gb|EIR64508.1| agmatine deiminase [Yersinia pestis PY-16]
gi|391512234|gb|EIR65561.1| agmatine deiminase [Yersinia pestis PY-19]
gi|391515367|gb|EIR68360.1| agmatine deiminase [Yersinia pestis PY-25]
gi|391526520|gb|EIR78537.1| agmatine deiminase [Yersinia pestis PY-29]
gi|391529584|gb|EIR81257.1| agmatine deiminase [Yersinia pestis PY-34]
gi|391530372|gb|EIR81955.1| agmatine deiminase [Yersinia pestis PY-32]
gi|391543247|gb|EIR93594.1| agmatine deiminase [Yersinia pestis PY-36]
gi|391545153|gb|EIR95278.1| agmatine deiminase [Yersinia pestis PY-42]
gi|391545935|gb|EIR95971.1| agmatine deiminase [Yersinia pestis PY-45]
gi|391559844|gb|EIS08544.1| agmatine deiminase [Yersinia pestis PY-46]
gi|391560609|gb|EIS09221.1| agmatine deiminase [Yersinia pestis PY-47]
gi|391562466|gb|EIS10873.1| agmatine deiminase [Yersinia pestis PY-48]
gi|391575564|gb|EIS22246.1| agmatine deiminase [Yersinia pestis PY-53]
gi|391587379|gb|EIS32544.1| agmatine deiminase [Yersinia pestis PY-55]
gi|391588780|gb|EIS33761.1| agmatine deiminase [Yersinia pestis PY-54]
gi|391590891|gb|EIS35540.1| agmatine deiminase [Yersinia pestis PY-56]
gi|391604259|gb|EIS47292.1| agmatine deiminase [Yersinia pestis PY-60]
gi|391605085|gb|EIS48012.1| agmatine deiminase [Yersinia pestis PY-58]
gi|391606247|gb|EIS49004.1| agmatine deiminase [Yersinia pestis PY-59]
gi|391618764|gb|EIS60126.1| agmatine deiminase [Yersinia pestis PY-61]
gi|391619440|gb|EIS60708.1| agmatine deiminase [Yersinia pestis PY-63]
gi|391626851|gb|EIS67133.1| agmatine deiminase [Yersinia pestis PY-64]
gi|391630282|gb|EIS70066.1| agmatine deiminase [Yersinia pestis PY-65]
gi|391641721|gb|EIS80080.1| agmatine deiminase [Yersinia pestis PY-71]
gi|391645131|gb|EIS83040.1| agmatine deiminase [Yersinia pestis PY-66]
gi|391654004|gb|EIS90876.1| agmatine deiminase [Yersinia pestis PY-76]
gi|391660317|gb|EIS96491.1| agmatine deiminase [Yersinia pestis PY-88]
gi|391666882|gb|EIT02273.1| agmatine deiminase [Yersinia pestis PY-90]
gi|391672173|gb|EIT07016.1| agmatine deiminase [Yersinia pestis PY-91]
gi|391684995|gb|EIT18573.1| agmatine deiminase [Yersinia pestis PY-93]
gi|391686551|gb|EIT19960.1| agmatine deiminase [Yersinia pestis PY-92]
gi|391687470|gb|EIT20774.1| agmatine deiminase [Yersinia pestis PY-94]
gi|391699255|gb|EIT31467.1| agmatine deiminase [Yersinia pestis PY-95]
gi|391702878|gb|EIT34713.1| agmatine deiminase [Yersinia pestis PY-96]
gi|391703474|gb|EIT35223.1| agmatine deiminase [Yersinia pestis PY-98]
gi|391719209|gb|EIT49352.1| agmatine deiminase [Yersinia pestis PY-100]
gi|391730328|gb|EIT59171.1| agmatine deiminase [Yersinia pestis PY-102]
gi|391733028|gb|EIT61488.1| agmatine deiminase [Yersinia pestis PY-103]
gi|391736669|gb|EIT64639.1| agmatine deiminase [Yersinia pestis PY-113]
gi|411177518|gb|EKS47532.1| agmatine deiminase [Yersinia pestis INS]
Length = 371
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 134/222 (60%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ GTP G+ MPAEW P WM WP R DNWR A+ AQ+ FAKVA AIS+ PV
Sbjct: 13 LPGTPRQDGFFMPAEWAPQDAVWMLWPYRQ---DNWRGKAIPAQQTFAKVAEAISRATPV 69
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A++ +P N+ ++EM+ + +W RDTGPT+V+N ++ +DW
Sbjct: 70 FMGVPAEFMAQAKATMPANVTLVEMASDDAWMRDTGPTMVINGAAERRA--------VDW 121
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG++ G Y DW D +VA ++ + + ++LEGGSIH DGEGT LTT EC
Sbjct: 122 QFNAWGGLNGGLYADWQQDEKVAVQVSDFLKNAHYSAPLILEGGSIHTDGEGTLLTTAEC 181
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNPHL + QIE L YLGV IWL G++ DG
Sbjct: 182 LLNPNRNPHLNQAQIEQLLCDYLGVTHFIWLQDGVYNDETDG 223
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 225 EAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERARE 284
+A PR AG RLA SYVNF I+N II P D + DG+A +L Q FP Y +VG+ ARE
Sbjct: 296 DAVPRTAGERLAGSYVNFLISNQQIIFPLL-DSRTDGQANDLLQQMFPGYAIVGVP-ARE 353
Query: 285 IVLGGGNIHCITQQQPA 301
I+LGGGNIHCITQQ PA
Sbjct: 354 ILLGGGNIHCITQQIPA 370
>gi|218885756|ref|YP_002435077.1| Agmatine deiminase [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218756710|gb|ACL07609.1| Agmatine deiminase [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 370
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/358 (37%), Positives = 171/358 (47%), Gaps = 81/358 (22%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRV-FAKVATAISKFEPVTVC 65
P G MPAEW PH+ CWM WP D +DAL R FA V AI++FEPVT+
Sbjct: 22 PVCDGLHMPAEWSPHAGCWMAWPCP----DPLLEDALDTVRTSFAGVVRAIARFEPVTLL 77
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A E A + ++V+ + +W RD GPT VV+ + VAG+DW FN
Sbjct: 78 ARPEDAEVAAALCGPGVQVVPAPITDAWMRDFGPTFVVDGAGG--------VAGVDWMFN 129
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
SWG Y + + D VA+ ILS + R+ +LEGGSIHVDG+GT +TTE+CLL+
Sbjct: 130 SWGHT----YDEPTHDDDVAQLILSRLGMRRYAAPFILEGGSIHVDGQGTLMTTEQCLLD 185
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG-------------------MIH---- 222
RN +TK E AYLGV K+IWL GL G ++H
Sbjct: 186 PRRNAGMTKADFEELFAAYLGVRKVIWLGEGLEGDDTHGHVDIVSCFARPGVVLLHRCDD 245
Query: 223 --------------------DGEAKP------------RLAGTRLAASYVNFYIANGGII 250
D + KP G R+ SY+NFY+ANGGI+
Sbjct: 246 PEDPNHAVYQDNLRRLQLATDADGKPLEIVTIDQPNRAEHGGKRMDLSYINFYVANGGIV 305
Query: 251 TPQFG--------DKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
FG D A L + FP+ EVV + + +I GGG IHCITQQQP
Sbjct: 306 MSAFGAPGGGADSQGALDRVAFETLRRVFPEREVVQVH-SLDIFRGGGGIHCITQQQP 362
>gi|22127201|ref|NP_670624.1| agmatine deiminase [Yersinia pestis KIM10+]
gi|153948095|ref|YP_001399816.1| agmatine deiminase [Yersinia pseudotuberculosis IP 31758]
gi|73622180|sp|Q8ZHG0.2|AGUA_YERPE RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|73622181|sp|Q666N7.2|AGUA_YERPS RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|166919520|sp|A7FEY8.1|AGUA_YERP3 RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|21960267|gb|AAM86875.1|AE013933_12 hypothetical [Yersinia pestis KIM10+]
gi|152959590|gb|ABS47051.1| agmatine deiminase [Yersinia pseudotuberculosis IP 31758]
Length = 365
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 134/222 (60%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ GTP G+ MPAEW P WM WP R DNWR A+ AQ+ FAKVA AIS+ PV
Sbjct: 7 LPGTPRQDGFFMPAEWAPQDAVWMLWPYRQ---DNWRGKAIPAQQTFAKVAEAISRATPV 63
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A++ +P N+ ++EM+ + +W RDTGPT+V+N ++ +DW
Sbjct: 64 FMGVPAEFMAQAKATMPANVTLVEMASDDAWMRDTGPTMVINGAAERRA--------VDW 115
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG++ G Y DW D +VA ++ + + ++LEGGSIH DGEGT LTT EC
Sbjct: 116 QFNAWGGLNGGLYADWQQDEKVAVQVSDFLKNAHYSAPLILEGGSIHTDGEGTLLTTAEC 175
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNPHL + QIE L YLGV IWL G++ DG
Sbjct: 176 LLNPNRNPHLNQAQIEQLLCDYLGVTHFIWLQDGVYNDETDG 217
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 225 EAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERARE 284
+A PR AG RLA SYVNF I+N II P D + DG+A +L Q FP Y +VG+ ARE
Sbjct: 290 DAVPRTAGERLAGSYVNFLISNQQIIFPLL-DSRTDGQANDLLQQMFPGYAIVGVP-ARE 347
Query: 285 IVLGGGNIHCITQQQPA 301
I+LGGGNIHCITQQ PA
Sbjct: 348 ILLGGGNIHCITQQIPA 364
>gi|336314308|ref|ZP_08569227.1| agmatine deiminase [Rheinheimera sp. A13L]
gi|335881321|gb|EGM79201.1| agmatine deiminase [Rheinheimera sp. A13L]
Length = 368
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/230 (51%), Positives = 144/230 (62%), Gaps = 18/230 (7%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
+ +N TP G+ MPAEW H Q WM WP ER DNWR A AQ F V AI++FE
Sbjct: 3 VTLNSTPRADGFFMPAEWVTHKQTWMVWP---ERTDNWRLGAKPAQNAFCAVIRAIARFE 59
Query: 61 PVTVCASAAQWENARSQLPEN-----IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAP 115
PVTV ASAAQ+ NA++QL IRV+E S + +W RDTGPT V N
Sbjct: 60 PVTVLASAAQFANAQAQLSLEATTYPIRVVETSTDDAWCRDTGPTFVTN---------GK 110
Query: 116 KVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEG 174
+V +DW FN+WGG++ G Y W D QVA+KI + E PR+ VLEGG+IHVDGEG
Sbjct: 111 EVRAVDWTFNAWGGLNGGLYFPWHRDDQVAQKIANIEGTPRYRTEGFVLEGGAIHVDGEG 170
Query: 175 TCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
T LTTEECLLNKNRNP L++ QIE L YL + K+IWL G+F DG
Sbjct: 171 TLLTTEECLLNKNRNPDLSREQIEQMLSDYLSIDKVIWLKEGIFNDETDG 220
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Query: 224 GEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAR 283
G A PR + RLA SY+NFY+ NGG++ P F D D A+ +LS+ FPK++VV + R
Sbjct: 293 GAAVPRESEARLAGSYINFYLCNGGLVVPVFDDAN-DQVAIEILSKVFPKHQVVTVP-GR 350
Query: 284 EIVLGGGNIHCITQQQPA 301
EI+LGGGN+HCITQQQP+
Sbjct: 351 EILLGGGNVHCITQQQPS 368
>gi|451819282|ref|YP_007455483.1| putative agmatine deiminase AguA [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451785261|gb|AGF56229.1| putative agmatine deiminase AguA [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 367
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/359 (37%), Positives = 173/359 (48%), Gaps = 73/359 (20%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
P Y MPAEW H + ++ WPV+ + ++ +A+ AIS+FEPVTV
Sbjct: 21 PKDLNYKMPAEWTTHERTFISWPVKESMC--YPENHESVCLGYAEYIKAISEFEPVTVIV 78
Query: 67 SAAQWENARSQL-PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
+ + NI + + N +W RD GPT VV+++ +AG++W FN
Sbjct: 79 NPKDLTDVTKLFASSNISFLPIDHNDAWLRDNGPTFVVDENY--------NIAGVNWKFN 130
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WG Y W LD VA KIL + +F +VLEGGSIHVDGEGT LTTEECLLN
Sbjct: 131 AWGEK----YAPWDLDDMVAPKILEHFNVKKFDAPLVLEGGSIHVDGEGTLLTTEECLLN 186
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG--------------------- 224
NRNP LTK QIEN K YL + KIIWL GL G DG
Sbjct: 187 PNRNPDLTKEQIENYAKQYLNIEKIIWLKNGLDGDETDGHVDNIACFAAPGKIIMQTCDD 246
Query: 225 --------------------EAK------------PRL--AGTRLAASYVNFYIANGGII 250
+AK PR+ G RL SY+NFY N GII
Sbjct: 247 PNDKNYEITLENLEILKNSTDAKGRKLEVISINQPPRVEYEGERLTLSYLNFYFVNDGII 306
Query: 251 TPQFGD--KKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIPTNAA 307
P FG K+ D A VLS+ FP + ++ ++ GGN+HC TQQ P + T+ A
Sbjct: 307 LPIFGGTAKEADKLAENVLSETFPNRRIRTVD-GITVIKEGGNVHCTTQQMPLVKTSRA 364
>gi|359414058|ref|ZP_09206523.1| Agmatine deiminase [Clostridium sp. DL-VIII]
gi|357172942|gb|EHJ01117.1| Agmatine deiminase [Clostridium sp. DL-VIII]
Length = 343
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/354 (37%), Positives = 174/354 (49%), Gaps = 74/354 (20%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
P Y MPAEW H + ++ WPV+ +++ +A+ AIS+FEPVTV
Sbjct: 3 PKDLNYKMPAEWTTHERTFISWPVKESMCHPENHESVCLG--YAEFIKAISEFEPVTVIV 60
Query: 67 SAAQWENARSQL--PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
+ ++ N+ + + N +W RD GPT ++N + + +AG++WNF
Sbjct: 61 NPEDLTYVQNHFKTSNNVEFLSIEHNDAWLRDNGPTFIMNDTQS--------LAGVNWNF 112
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL 184
N+WGG Y W LD +VA KIL + +F +LEGGSIHVDGEGT LTTEECLL
Sbjct: 113 NAWGGK----YAPWDLDDKVAGKILEHFNVEKFDAPFILEGGSIHVDGEGTLLTTEECLL 168
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG-------------------- 224
N NRNP LTK QIEN LK YL + K+IWL GL G DG
Sbjct: 169 NPNRNPDLTKEQIENYLKEYLNIEKVIWLKNGLDGDETDGHVDNIACFAAPGKILMQTCN 228
Query: 225 ---------------------EAKPR--------------LAGTRLAASYVNFYIANGGI 249
+AK R G RL SY+NFY N GI
Sbjct: 229 DHEDNNYKITLENLEILKNSTDAKGRKFEIIKINQPPRTEYKGERLTLSYLNFYFVNDGI 288
Query: 250 ITPQFG--DKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
I P FG K+ D A +VLS+ FP ++ ++ ++ GGNIHC TQQ PA
Sbjct: 289 ILPVFGGNAKEADKAAAKVLSETFPDRKIRTVD-GIAVIKEGGNIHCTTQQMPA 341
>gi|338739902|ref|YP_004676864.1| agmatine deiminase [Hyphomicrobium sp. MC1]
gi|337760465|emb|CCB66298.1| putative agmatine deiminase [Hyphomicrobium sp. MC1]
Length = 389
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/213 (53%), Positives = 137/213 (64%), Gaps = 11/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEWEPH CWM WP ER DNWR A AQ FA VA AI++ EPVTVC
Sbjct: 23 TPKQDGFRMPAEWEPHIGCWMLWP---ERSDNWRSGAKPAQHAFAAVAAAIAQGEPVTVC 79
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
AS AQ+ AR L ++R++EM+ N SW RD GPT VVN + A V GIDW FN
Sbjct: 80 ASPAQYLIAREMLDPSVRLVEMTSNDSWIRDCGPTFVVNDAGA--------VRGIDWKFN 131
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WGG+ G Y W D V K++ ER R+ +LEGGSI VDG+GT LTTEECLLN
Sbjct: 132 AWGGLAGGLYFPWDQDDLVGEKVIELERDDRYAPDFILEGGSIDVDGQGTLLTTEECLLN 191
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
NRNP ++ +IE L YL + KIIWL +G++
Sbjct: 192 PNRNPDKSRAEIEKYLCDYLNLEKIIWLEKGVY 224
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR AG RLAASYVNFYIAN I+ P+F D DG A L++ FP +V + REI+L
Sbjct: 307 PREAGNRLAASYVNFYIANDVIVMPRFNDPA-DGPAQDALAKLFPTRRIVSVP-GREILL 364
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQ+P
Sbjct: 365 GGGNIHCITQQEP 377
>gi|392987619|ref|YP_006486212.1| agmatine deiminase [Enterococcus hirae ATCC 9790]
gi|392335039|gb|AFM69321.1| agmatine deiminase [Enterococcus hirae ATCC 9790]
Length = 365
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 132/213 (61%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+EP + WM WP ER DNWRD AQ FA+VA AISKF P+ V
Sbjct: 9 TPKQDGFRMPGEFEPQEKVWMIWP---ERPDNWRDGGKPAQEAFAEVAKAISKFTPMNVV 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S Q++N R QLP +I V EMS N +W RD GP+ V+N + ++ G DW FN
Sbjct: 66 VSQQQYQNCRRQLPADITVYEMSNNDAWIRDCGPSFVINDNG--------ELRGNDWGFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W D +A+KI E + + +LEGGS HVDGEGT LTTE CLL
Sbjct: 118 AWGGLVDGLYFPWDQDDLIAQKICEIEHVDSYRTEDFILEGGSFHVDGEGTVLTTEMCLL 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
++ RNPH+TK +IE +L YL K++WL G+
Sbjct: 178 SEGRNPHMTKEEIEQKLCDYLNCEKVLWLGDGI 210
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I N G+I PQ+GDK D A+ +++ FP EVVG+ EIV
Sbjct: 293 PREDGDICIASYMNFLITNNGVIVPQYGDKN-DELALEEIAEFFPDKEVVGVNTV-EIVY 350
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQQP
Sbjct: 351 GGGNIHCITQQQP 363
>gi|269122038|ref|YP_003310215.1| agmatine deiminase [Sebaldella termitidis ATCC 33386]
gi|268615916|gb|ACZ10284.1| agmatine deiminase [Sebaldella termitidis ATCC 33386]
Length = 366
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/213 (48%), Positives = 136/213 (63%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E +M WP ER DNWR+ AQ+ FA VA AIS+FEPVTV
Sbjct: 9 TPRQDGFRMPGEFEEQKCVFMIWP---ERPDNWRNGGKPAQKSFADVAIAISEFEPVTVL 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S AQ++N R+ LP+NIRV+E S + +W RD GPT V+N + G DW FN
Sbjct: 66 VSNAQYKNCRNILPKNIRVVEASNDDAWVRDCGPTFVINDKG--------DIRGCDWEFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W+ D Q+A+K+ E + + VLEGGSIH DGEGT LTTE CLL
Sbjct: 118 AWGGLVDGLYFPWANDDQIAQKVCEIEGVDSYRTDGFVLEGGSIHADGEGTLLTTEMCLL 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
++ RNPH+TK +IE +L YL + K+IW+ G+
Sbjct: 178 SEGRNPHMTKEEIEQKLGDYLSIDKVIWIKDGI 210
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I NGG+I PQ+GD+ D A+ + + FP +VVG++ +E+V
Sbjct: 293 PREDGDICIASYMNFLIVNGGVIVPQYGDEN-DSLAIEQIKEMFPDRKVVGVD-TKEVVY 350
Query: 288 GGGNIHCITQQQP 300
GGGN+HCITQ P
Sbjct: 351 GGGNVHCITQHMP 363
>gi|409385949|ref|ZP_11238462.1| Agmatine deiminase [Lactococcus raffinolactis 4877]
gi|399206730|emb|CCK19377.1| Agmatine deiminase [Lactococcus raffinolactis 4877]
Length = 359
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 133/213 (62%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAE+EP Q WM WP ER DNWR+ A AQ+ FA VA AIS+F + V
Sbjct: 9 TPKADGFRMPAEFEPQEQVWMIWP---ERPDNWRNGAKPAQKSFANVAKAISRFTKMNVL 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S AQ+ N R QLP++I VIEMS N +W RD GPT ++N ++ DW+FN
Sbjct: 66 VSQAQYANCREQLPDDIHVIEMSNNDAWVRDCGPTFIINDKG--------EIRANDWDFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W D +ARK+ E + + VLEGGS HVDG+GT +TTE CLL
Sbjct: 118 AWGGLVDGLYFPWDQDELIARKVTEIEGIDTYKTKGFVLEGGSFHVDGQGTVMTTEMCLL 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
++ RNPH++K +IE L YL K++W+ G+
Sbjct: 178 SEGRNPHMSKSEIEKMLCDYLNCEKVLWIKDGI 210
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G SY+NF I NGG+I PQ+GD+ D A+ + + FP E+VG++ EIV
Sbjct: 293 PREDGDICTTSYMNFLITNGGVIVPQYGDEN-DALALTQVQEMFPDKEIVGVD-TLEIVY 350
Query: 288 GGGNIHCIT 296
GGGNIHC+T
Sbjct: 351 GGGNIHCVT 359
>gi|441505961|ref|ZP_20987939.1| Agmatine deiminase [Photobacterium sp. AK15]
gi|441426311|gb|ELR63795.1| Agmatine deiminase [Photobacterium sp. AK15]
Length = 348
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 133/205 (64%), Gaps = 11/205 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MP E EP + WM WP ER DNWR AQ FAKVA AI++ PVT+ SAAQ+EN
Sbjct: 1 MPGEHEPQASVWMAWP---ERTDNWRFGGKPAQVTFAKVAEAIAETTPVTMVVSAAQFEN 57
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
AR+ LP +I+++EMS + SW RD GP+ VVN + G +DW+FN+WGG+ DG
Sbjct: 58 ARNMLPNHIQLLEMSTDDSWMRDIGPSYVVNDNGERRG--------VDWHFNAWGGLIDG 109
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
Y W D VARK+ + +VLEGGSIHVDGEGT TTEECLL+ +RNP L+
Sbjct: 110 LYFPWDKDDAVARKVCEVLGDNSYRAPIVLEGGSIHVDGEGTLYTTEECLLHPSRNPDLS 169
Query: 194 KGQIENELKAYLGVMKIIWLPRGLF 218
+ Q+E L YL V K++W+P+GL+
Sbjct: 170 REQLEQVLGDYLSVEKVVWIPQGLY 194
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R AG RLA SY N+ I+N II P D D E +LS +P Y+V G++ AREI+LG
Sbjct: 277 REAGERLAGSYANYLISNQHIIYPLL-DPAHDDEVATLLSALYPGYKVTGVD-AREILLG 334
Query: 289 GGNIHCITQQQPAI 302
GGNIHCITQQ P +
Sbjct: 335 GGNIHCITQQIPRV 348
>gi|149188522|ref|ZP_01866815.1| hypothetical protein VSAK1_21044 [Vibrio shilonii AK1]
gi|148837740|gb|EDL54684.1| hypothetical protein VSAK1_21044 [Vibrio shilonii AK1]
Length = 360
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 107/224 (47%), Positives = 141/224 (62%), Gaps = 11/224 (4%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M+++ TP G+ PAE+EP + W+ WP ER DNWR A AQ+ FA VA AI+
Sbjct: 1 MKLDTTPKQDGFYFPAEYEPVREVWLAWP---ERRDNWRASAKPAQQTFANVANAIADVV 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
V+V S++Q+E ARS L +++++EM+ N SW RD GPT+VVN SSG + G+
Sbjct: 58 CVSVAVSSSQYETARSMLHSSVKLVEMAFNDSWMRDIGPTVVVN----SSGERR----GV 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG +G Y DWS D +VA + + + VLEGG+IH DGEGT TTE
Sbjct: 110 SWKFNAWGGEFNGLYEDWSDDDKVAASVCDVLGIDHYRAPFVLEGGAIHTDGEGTLYTTE 169
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLL+ RNP L+K QIE L YLG+ K++WLP GLF DG
Sbjct: 170 ECLLSPGRNPELSKQQIEALLAEYLGIEKVVWLPNGLFNDETDG 213
>gi|15673679|ref|NP_267853.1| agmatine deiminase [Lactococcus lactis subsp. lactis Il1403]
gi|385831154|ref|YP_005868967.1| agmatine deiminase [Lactococcus lactis subsp. lactis CV56]
gi|418037665|ref|ZP_12676039.1| Agmatine deiminase [Lactococcus lactis subsp. cremoris CNCM I-1631]
gi|73622162|sp|Q9CEY6.1|AGUA_LACLA RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|12724713|gb|AAK05795.1|AE006400_5 conserved hypothetical protein [Lactococcus lactis subsp. lactis
Il1403]
gi|326407162|gb|ADZ64233.1| agmatine deiminase [Lactococcus lactis subsp. lactis CV56]
gi|347360582|emb|CCA89443.1| agmatine deiminase [Lactococcus lactis subsp. lactis]
gi|347360590|emb|CCA89450.1| agmatine deiminase [Lactococcus lactis subsp. lactis]
gi|347360638|emb|CCA89492.1| agmatine deiminase [Lactococcus lactis subsp. lactis]
gi|354694338|gb|EHE94010.1| Agmatine deiminase [Lactococcus lactis subsp. cremoris CNCM I-1631]
Length = 366
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 134/213 (62%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E Q +M WP ER DNWRD A Q F VA AIS+F PVT+
Sbjct: 9 TPKEDGFRMPGEFEAQDQIFMIWP---ERPDNWRDGAKPVQIAFTNVAKAISRFTPVTML 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S +Q++NAR QLP ++RV+E+S N SW RD GP+ V+N ++ DW FN
Sbjct: 66 VSQSQYQNARYQLPADVRVLEVSNNDSWVRDCGPSFVINDKG--------ELRANDWTFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W D VA+K+ ER+ + VLEGGS HVDG+GT LTTE CLL
Sbjct: 118 AWGGLVDGLYFPWDQDDLVAQKVCELERVDSYRTDDFVLEGGSFHVDGQGTVLTTEMCLL 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
++ RNPH++K IEN+LK +L KI+WL G+
Sbjct: 178 SEGRNPHMSKEDIENKLKEHLNAEKILWLGDGI 210
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I N G+I PQ+GD+ D A++ + + FP E+VG+ E+V
Sbjct: 293 PREDGDICIASYMNFLITNKGVIVPQYGDEN-DALALKQVQEMFPDREIVGVNTV-EVVY 350
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQQP
Sbjct: 351 GGGNIHCITQQQP 363
>gi|421495637|ref|ZP_15942915.1| Porphyromonas-type peptidyl-arginine deiminase [Aeromonas media WS]
gi|407185400|gb|EKE59179.1| Porphyromonas-type peptidyl-arginine deiminase [Aeromonas media WS]
Length = 365
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 104/222 (46%), Positives = 133/222 (59%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N PA G+ MPAEW WM WP R DNWR AQ FAKVA AI + PV
Sbjct: 6 INSIPAADGFTMPAEWAHQQAVWMIWPFR---PDNWRVAGRFAQATFAKVADAIGQATPV 62
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A E AR+ +P ++ ++EM+ + W RDTGPT+V N A + G+DW
Sbjct: 63 FMGVPAEFMEQARAIMPAHVTLVEMNSDDCWARDTGPTVVTNA--------AGECRGVDW 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG G Y W D +VA ++L + R+ ++LEGGSIHVDGEGTC+TT EC
Sbjct: 115 GFNAWGGHKGGLYYPWDQDEKVAAQMLEQHGMDRYAAPLILEGGSIHVDGEGTCMTTAEC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN+NRNPHL+K QIE L+ YLGV IWL G++ DG
Sbjct: 175 LLNENRNPHLSKEQIEAHLRDYLGVTSFIWLDEGVYMDETDG 216
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ G PR A RLA SYVNF I N I+ P D DGEA R+L + FP++ VVG+
Sbjct: 285 VESGSGVPREAEGRLAGSYVNFLITNDRIVYPLL-DAATDGEAQRILEEIFPEHTVVGVP 343
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ P+
Sbjct: 344 -AREILLGGGNIHCITQQIPS 363
>gi|347360614|emb|CCA89471.1| agmatine deiminase [Lactococcus lactis subsp. lactis]
Length = 366
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 134/213 (62%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E Q +M WP ER DNWRD A Q F VA AIS+F PVT+
Sbjct: 9 TPKEDGFRMPGEFEAQDQIFMIWP---ERPDNWRDGAKPVQIAFTNVAKAISRFTPVTML 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S +Q++NAR QLP ++RV+E+S N SW RD GP+ V+N ++ DW FN
Sbjct: 66 VSQSQYQNARYQLPADVRVLEVSNNDSWVRDCGPSFVINDKG--------ELRANDWTFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W D VA+K+ ER+ + VLEGGS HVDG+GT LTTE CLL
Sbjct: 118 AWGGLVDGLYFPWDQDDLVAQKVCELERVDSYRTDDFVLEGGSFHVDGQGTVLTTEMCLL 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
++ RNPH++K IEN+LK +L KI+WL G+
Sbjct: 178 SEGRNPHMSKEDIENKLKEHLNAEKILWLGDGI 210
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I N G+I PQ+GD+ D A++ + + FP E+VG+ E+V
Sbjct: 293 PREDGDICIASYMNFLITNKGVIVPQYGDEN-DALALKQVQEMFPDREIVGVNTV-EVVY 350
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQQP
Sbjct: 351 GGGNIHCITQQQP 363
>gi|281492280|ref|YP_003354260.1| agmatine deiminase [Lactococcus lactis subsp. lactis KF147]
gi|281375944|gb|ABX75587.2| Agmatine deiminase [Lactococcus lactis subsp. lactis KF147]
Length = 366
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 134/213 (62%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E Q +M WP ER DNWRD A Q F VA AIS+F PVT+
Sbjct: 9 TPKEDGFRMPGEFEAQDQIFMIWP---ERPDNWRDGAKPVQIAFTNVAKAISRFTPVTML 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S +Q++NAR QLP ++RV+E+S N SW RD GP+ V+N ++ DW FN
Sbjct: 66 VSQSQYQNARYQLPADVRVLEVSNNDSWVRDCGPSFVINDKG--------ELRANDWTFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W D VA+K+ ER+ + VLEGGS HVDG+GT LTTE CLL
Sbjct: 118 AWGGLVDGLYFPWDQDDLVAQKVCELERVDSYRTDDFVLEGGSFHVDGQGTVLTTEMCLL 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
++ RNPH++K IEN+LK +L KI+WL G+
Sbjct: 178 SEGRNPHMSKEDIENKLKEHLSAEKILWLGDGI 210
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I N G+I PQ+GD+ D A++ + + FP E+VG+ E+V
Sbjct: 293 PREDGDICIASYMNFLITNKGVIVPQYGDEN-DALALKQVQEMFPDREIVGVNTV-EVVY 350
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQQP
Sbjct: 351 GGGNIHCITQQQP 363
>gi|116492002|ref|YP_803737.1| agmatine deiminase [Pediococcus pentosaceus ATCC 25745]
gi|116102152|gb|ABJ67295.1| agmatine deiminase [Pediococcus pentosaceus ATCC 25745]
Length = 364
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 138/217 (63%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP GY MP E+E HS +M WP +R DNWR+ AQ+ FAKVA AISKFE V
Sbjct: 4 LDSTPKKDGYRMPGEFEEHSGAYMLWP---QRPDNWRNGGKPAQQTFAKVAEAISKFEHV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV + Q+ NAR+ L +++ VIE+S + SW RD G T V N + +DW
Sbjct: 61 TVGVNDDQYANARNMLSDDVEVIEISNDDSWIRDCGATFVKNDQG--------DLRAVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG+ DG Y W D +VA+K+ E R+ VLEGGSIHVDGEGT +TTEE
Sbjct: 113 TFNAWGGLVDGLYFPWDKDDRVAQKMAELEGTDRYRLDDFVLEGGSIHVDGEGTLITTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL++ RNP L++ QIE LK +L + KIIWL +G++
Sbjct: 173 CLLSEGRNPQLSREQIEEVLKEHLNLEKIIWLKKGIY 209
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G RLAASY+N+Y ANGGI+ P F D D +A L + +P EV+G+ AREI+L
Sbjct: 292 PRTEGERLAASYINYYTANGGIVFPLFND-PMDEKAKATLKELYPDREVIGVP-AREILL 349
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQ P
Sbjct: 350 GGGNIHCITQQVP 362
>gi|448925401|gb|AGE48981.1| agmatine deiminase [Paramecium bursaria Chlorella virus AP110A]
Length = 363
Score = 203 bits (517), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 125/368 (33%), Positives = 174/368 (47%), Gaps = 85/368 (23%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
P+ + MP E+E HS WM +P R DNWRDDA AQ +A + K+E VT+
Sbjct: 9 PSEDDFRMPGEFEKHSGTWMIFP---HRPDNWRDDAFAAQEQLCALANLVGKYEKVTMLV 65
Query: 67 SAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
A + ++ +I + +W RDTG VVN +V G+ ++FN+
Sbjct: 66 PRRYVRRALDLVSTDVSIIVKDTDDAWMRDTGAVFVVN---------GKEVRGVSFDFNA 116
Query: 127 WGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTEECLLN 185
WGG DG Y+ W LD +V + + + VLEGGS+HVDGEGT +TTEECLL+
Sbjct: 117 WGGDIDGLYKSWELDAEVGKYMCKARGFKMYTTPGFVLEGGSVHVDGEGTLITTEECLLS 176
Query: 186 KNRNPHL-----------------------------TKGQIEN----------------- 199
RNPHL T G ++N
Sbjct: 177 VGRNPHLTRDEIETNLKMYLGVEKIVWLPYGIVDDETNGHVDNMCCFARPGEVMLAWTDD 236
Query: 200 -------ELKAYLGVMKIIWLPRGLFGMIH---------------DGEAK---PRLAGTR 234
KA V+K +G +IH DG + PR AG R
Sbjct: 237 KKHPQYERSKAAYEVLKTTLDAKGRRFVIHKIHIPNDMYITQIEADGVVQGHTPRTAGDR 296
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
LA+SY+NF + NG II P FGD ++D A + + FP+ E++G +RE +LGGGN+HC
Sbjct: 297 LASSYINFIMPNGAIIYPTFGDDEYDSLAHKKFEEIFPEREIIGF-YSREFLLGGGNMHC 355
Query: 295 ITQQQPAI 302
+TQQQP++
Sbjct: 356 LTQQQPSV 363
>gi|449932241|ref|ZP_21802764.1| agmatine deiminase [Streptococcus mutans 3SN1]
gi|449161593|gb|EMB64776.1| agmatine deiminase [Streptococcus mutans 3SN1]
Length = 369
Score = 203 bits (516), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 137/219 (62%), Gaps = 16/219 (7%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N TP G+ MP E+E Q WM WP R DNWR A AQ+ F +VA AIS+FEPV+
Sbjct: 7 NTTPKQDGFRMPGEFEKQKQIWMLWPWRN---DNWRLGAKPAQKAFLEVAEAISEFEPVS 63
Query: 64 VCASAAQWENARSQLPE----NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
+C Q+ENA +++ E NIR+IEM+ + +W RD GPT +VN +
Sbjct: 64 LCVPPLQYENALARVSELGSHNIRIIEMTNDDAWIRDCGPTFLVNDKG--------DLRA 115
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLT 178
+DW FN+WGG+ DG Y W D VARK+ TE + + VLEGGSIHVDGEGT L
Sbjct: 116 VDWEFNAWGGLVDGLYFPWDQDALVARKVCETEGVDSYKTKDFVLEGGSIHVDGEGTVLV 175
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
TE CLL+ +RNPHLTK IE++LK YL +K++W+ G+
Sbjct: 176 TEMCLLHPSRNPHLTKEDIEDKLKDYLNCVKVLWVKDGI 214
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I NGGII PQ+GD+ D A + + + FP +VVG+ R EI
Sbjct: 297 PREEGEMAIASYLNFLIVNGGIILPQYGDEN-DQLAKQQVQEMFPDRKVVGV-RTEEIAY 354
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQQPA
Sbjct: 355 GGGNIHCITQQQPA 368
>gi|347360606|emb|CCA89464.1| agmatine deiminase [Lactococcus lactis subsp. lactis]
gi|374673780|dbj|BAL51671.1| hypothetical protein lilo_1674 [Lactococcus lactis subsp. lactis
IO-1]
Length = 366
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 134/213 (62%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E Q +M WP ER DNWRD A Q F VA AIS+F PVT+
Sbjct: 9 TPKEDGFRMPGEFEAQDQIFMIWP---ERPDNWRDGAKPVQIAFTNVAKAISRFTPVTML 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S +Q++NAR QLP ++RV+E+S N SW RD GP+ V+N ++ DW FN
Sbjct: 66 VSQSQYQNARYQLPADVRVLEVSNNDSWVRDCGPSFVINDKG--------ELRANDWTFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W D VA+K+ ER+ + VLEGGS HVDG+GT LTTE CLL
Sbjct: 118 AWGGLVDGLYFPWDQDDLVAQKVCELERVDSYRTDDFVLEGGSFHVDGQGTVLTTEMCLL 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
++ RNPH++K IEN+LK +L KI+WL G+
Sbjct: 178 SEGRNPHMSKEGIENKLKEHLNAEKILWLGDGI 210
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I N G+I PQ+GD+ D A++ + + FP E+VG+ E+V
Sbjct: 293 PREDGDICIASYMNFLITNKGVIVPQYGDEN-DALALKQVQEMFPDREIVGVNTV-EVVY 350
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQQP
Sbjct: 351 GGGNIHCITQQQP 363
>gi|238786368|ref|ZP_04630300.1| agmatine deiminase [Yersinia bercovieri ATCC 43970]
gi|238712726|gb|EEQ04806.1| agmatine deiminase [Yersinia bercovieri ATCC 43970]
Length = 379
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/222 (45%), Positives = 134/222 (60%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++GTP G+ MPAEW WM WP R DNWR + AQ+ FAKVA AIS+ PV
Sbjct: 21 LSGTPQQDGFFMPAEWAKQDAVWMLWPYRQ---DNWRGKGIPAQQTFAKVAEAISRTTPV 77
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A++ +P ++ ++EM+ + +W RDTGPT+V+N A + +DW
Sbjct: 78 FMGVPAEFMAQAKATMPASVSLVEMASDDAWMRDTGPTMVING--------AGERRAVDW 129
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG++ G Y DW D +VA ++ + + +VLEGGSIH DGEGT LTT EC
Sbjct: 130 QFNAWGGLNGGLYSDWQQDEKVATQVSDFLKNAHYRAPLVLEGGSIHTDGEGTLLTTAEC 189
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNPHL + QIE L+ YLGV IWL G++ DG
Sbjct: 190 LLNLNRNPHLNQAQIEQLLREYLGVTHFIWLQDGVYNDETDG 231
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
Query: 225 EAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERARE 284
+A PR AG RLA SYVNF I+N II P D + DG A +L Q FP Y +VG+ ARE
Sbjct: 304 DAVPRTAGERLAGSYVNFLISNQQIIYPLL-DSRTDGLAQDLLQQMFPDYAIVGVP-ARE 361
Query: 285 IVLGGGNIHCITQQQPA 301
I+LGGGNIHCITQQ PA
Sbjct: 362 ILLGGGNIHCITQQIPA 378
>gi|347360622|emb|CCA89478.1| agmatine deiminase [Lactococcus lactis subsp. lactis]
gi|347360630|emb|CCA89485.1| agmatine deiminase [Lactococcus lactis subsp. lactis]
Length = 366
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/213 (47%), Positives = 134/213 (62%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E Q +M WP ER DNWRD A Q F VA AIS+F PVT+
Sbjct: 9 TPKEDGFRMPGEFEAQDQIFMIWP---ERPDNWRDGAKPVQIAFTNVAKAISRFTPVTML 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S +Q++NAR QLP ++RV+++S N SW RD GP+ V+N ++ DW FN
Sbjct: 66 VSQSQYQNARYQLPADVRVLDVSNNDSWVRDCGPSFVINDKG--------ELRANDWTFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W D VA+K+ ER+ + VLEGGS HVDG+GT LTTE CLL
Sbjct: 118 AWGGLVDGLYFPWDQDDLVAQKVCELERVDSYRTDDFVLEGGSFHVDGQGTVLTTEMCLL 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
++ RNPH++K IEN+LK +L KI+WL G+
Sbjct: 178 SEGRNPHMSKEDIENKLKEHLNAEKILWLGDGI 210
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I N G+I PQ+GD+ D A++ + + FP E+VG+ E+V
Sbjct: 293 PREDGDICIASYMNFLITNKGVIVPQYGDEN-DALALKQVQEMFPDREIVGVNTV-EVVY 350
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQQP
Sbjct: 351 GGGNIHCITQQQP 363
>gi|317130913|ref|YP_004097195.1| Agmatine deiminase [Bacillus cellulosilyticus DSM 2522]
gi|315475861|gb|ADU32464.1| Agmatine deiminase [Bacillus cellulosilyticus DSM 2522]
Length = 339
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 167/344 (48%), Gaps = 74/344 (21%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWE- 72
MP EW PH + + WPV+ + + DD + ++ TAIS+FEPVTV + A
Sbjct: 9 MPPEWVPHKRTLISWPVKESMV--FPDDYDVVTNGYQELVTAISEFEPVTVIVNEADVAK 66
Query: 73 -NARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
N L N+ V+ + N +W RD GPT V+N +A + AGI+W FN+WG
Sbjct: 67 VNELFSLNNNVEVLSIEHNDAWLRDNGPTFVIN--------EAGEKAGINWIFNAWGE-- 116
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
Y W LD VA KIL + + +V+EGGS HVDGEGT +TTEECLL+ NRNP
Sbjct: 117 --KYAPWDLDDNVAPKILKHFNIKQIDAPIVMEGGSFHVDGEGTLITTEECLLHPNRNPS 174
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG--------------------------- 224
L+K +IE LK YLGV KIIWL RGL G DG
Sbjct: 175 LSKTEIEQHLKTYLGVEKIIWLKRGLSGDETDGHVDNIACYAAPGKVIMQVCEDKHDENY 234
Query: 225 ----------EAKPRLAGTRLAA------------------SYVNFYIANGGIITPQFGD 256
E G RL SY+NFY N GII P FG
Sbjct: 235 EITQENITILENTTDAKGRRLEVIQINQPPKVMQQSQRLTLSYLNFYFVNDGIILPVFGG 294
Query: 257 --KKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQ 298
++ D +A+ VL Q FP ++ I+ I+ GGN+HC TQQ
Sbjct: 295 TAEETDNQAIDVLQQVFPNRKIRTID-GMAIIKEGGNVHCTTQQ 337
>gi|357636796|ref|ZP_09134671.1| agmatine deiminase [Streptococcus macacae NCTC 11558]
gi|357585250|gb|EHJ52453.1| agmatine deiminase [Streptococcus macacae NCTC 11558]
Length = 369
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/220 (48%), Positives = 135/220 (61%), Gaps = 16/220 (7%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N P GY MP E+E Q WM WP R DNWR A AQ+ F +V AIS+FEPV
Sbjct: 6 INTRPKQDGYRMPGEFERQKQIWMLWPWRN---DNWRLGAKPAQKAFIEVVKAISEFEPV 62
Query: 63 TVCASAAQWENARSQLPE----NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVA 118
++C Q+ENA +++ E NIRVIEM+ + SW RD GPT +VN +
Sbjct: 63 SLCVPPQQYENAWARVSELGRDNIRVIEMTNDDSWIRDCGPTFLVNDKGG--------LR 114
Query: 119 GIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCL 177
+DW FN+WGG+ DG Y W D VARK+ E + + VLEGGSIHVDGEGT L
Sbjct: 115 AVDWEFNAWGGLVDGLYFPWDQDALVARKVCEIEGVDSYKTKDFVLEGGSIHVDGEGTVL 174
Query: 178 TTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
TE CLL+ +RNPH++KG IEN+LK YL KI+W+ G+
Sbjct: 175 VTEMCLLHPSRNPHMSKGDIENKLKDYLNAEKILWIKDGI 214
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I NGGII PQ+GD+ D AV+ + FP +++G+ R EI
Sbjct: 297 PREEGEIAIASYLNFLIVNGGIILPQYGDEN-DQLAVQQVKAMFPDRKIIGV-RTEEIAY 354
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQ+PA
Sbjct: 355 GGGNIHCITQQEPA 368
>gi|326797018|ref|YP_004314838.1| Agmatine deiminase [Marinomonas mediterranea MMB-1]
gi|326547782|gb|ADZ93002.1| Agmatine deiminase [Marinomonas mediterranea MMB-1]
Length = 375
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/215 (46%), Positives = 128/215 (59%), Gaps = 11/215 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TPA G+ MP E PHS W+ WP ER DNWRD+A AQ FA+ TA+S + V
Sbjct: 13 LESTPAQDGFHMPGEHHPHSSVWLIWP---ERPDNWRDNAKPAQATFARFITALSDYVDV 69
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ S +A+ QLPEN+ + M N +W RD GPT V+N +DW
Sbjct: 70 NLAVSPECLNDAKQQLPENVTLHPMKSNDAWMRDVGPTFVINDKGEKRA--------VDW 121
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
+FN+WGG DG Y DWS D ++A+++ E+ + +LEGGSIH DGEGT TTEEC
Sbjct: 122 HFNAWGGELDGLYEDWSDDERIAKQVADAEKAAAYKAPFILEGGSIHSDGEGTVYTTEEC 181
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
LL+ +RNP L+K QIE L YLG K+IWL GL
Sbjct: 182 LLHPSRNPELSKEQIEQHLFNYLGAQKVIWLKLGL 216
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R G RL ASY NF I N + P D+++D +A ++L AFP++++VGI AREIVLG
Sbjct: 300 RCEGERLGASYANFLITNNALFFPML-DERYDEQAKKILQGAFPEHKIVGIP-AREIVLG 357
Query: 289 GGNIHCITQQQP 300
GGN+HCITQQ P
Sbjct: 358 GGNLHCITQQVP 369
>gi|238759326|ref|ZP_04620492.1| agmatine deiminase [Yersinia aldovae ATCC 35236]
gi|238702487|gb|EEP95038.1| agmatine deiminase [Yersinia aldovae ATCC 35236]
Length = 372
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/222 (44%), Positives = 131/222 (59%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ GTP G+ MPAEW WM WP R DNWR + AQ+ FAKVA AIS+ PV
Sbjct: 14 LAGTPQQDGFFMPAEWAKQDAVWMLWPYRQ---DNWRGKGIPAQQTFAKVAEAISRTTPV 70
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A++ LP ++ ++EM+ + +W RDTGPT+V+N + +DW
Sbjct: 71 FMGVPAEFMPQAKATLPASVTLVEMASDDAWMRDTGPTMVINAAGERRA--------VDW 122
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG++ G Y DW D +VA ++ + ++LEGGSIH DGEGT LTT EC
Sbjct: 123 QFNAWGGLNGGLYADWQQDEKVAVQVCEHLHCTHYSAPLILEGGSIHTDGEGTLLTTAEC 182
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNPHL + QIE L+ YLGV IWL G++ DG
Sbjct: 183 LLNPNRNPHLNQAQIEQLLREYLGVSHFIWLQDGVYNDETDG 224
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
Query: 225 EAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERARE 284
+A PR AG RLA SYVNF I+N II P D + DG A +L Q FP Y +VG+ ARE
Sbjct: 297 DAVPRTAGERLAGSYVNFLISNQQIIYPLL-DSRTDGLAHDLLQQMFPDYAIVGVP-ARE 354
Query: 285 IVLGGGNIHCITQQQPA 301
I+LGGGNIHCITQQ PA
Sbjct: 355 ILLGGGNIHCITQQIPA 371
>gi|238752321|ref|ZP_04613800.1| agmatine deiminase [Yersinia rohdei ATCC 43380]
gi|238709482|gb|EEQ01721.1| agmatine deiminase [Yersinia rohdei ATCC 43380]
Length = 379
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/222 (45%), Positives = 130/222 (58%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MPAEW WM WP R DNWR + AQ+ FAKVA AIS+ PV
Sbjct: 21 LPSTPRQDGFFMPAEWAKQDAVWMLWPFRQ---DNWRGKGIPAQQTFAKVAKAISRTTPV 77
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
V A A++ LP N+ ++EM+ + +W RDTGPT+V+N + +DW
Sbjct: 78 FVGVPAEFMAQAKATLPANVTLVEMASDDAWMRDTGPTMVINGTGERRA--------VDW 129
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG++ G Y DW D ++A ++ + +VLEGGSIH DGEGT LTT EC
Sbjct: 130 QFNAWGGLNGGLYSDWQQDEKIAVQVSDFLNNAHYSAPLVLEGGSIHTDGEGTLLTTAEC 189
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNPHL + QIE L+ YLGV IWL G++ DG
Sbjct: 190 LLNPNRNPHLNQAQIEQLLREYLGVTHFIWLQDGVYNDETDG 231
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 225 EAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERARE 284
+A PR AG RLA SYVNF I+N II P D + DG A +L Q FP Y +VG+ ARE
Sbjct: 304 DAVPRTAGERLAGSYVNFLISNQQIIYPLL-DSRTDGLAQDLLQQMFPDYAIVGVP-ARE 361
Query: 285 IVLGGGNIHCITQQQP 300
I+LGGGNIHCITQQ P
Sbjct: 362 ILLGGGNIHCITQQIP 377
>gi|126215802|gb|ABN81021.1| AguA [Streptococcus ratti FA-1 = DSM 20564]
Length = 369
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 135/219 (61%), Gaps = 16/219 (7%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N TP G+ MP E+E Q WM WP R DNWR A AQ+ F +VA ISKFEPV+
Sbjct: 7 NSTPKQDGFRMPGEFEKQKQIWMLWPWRN---DNWRLGAKPAQKAFLEVAETISKFEPVS 63
Query: 64 VCASAAQWENARSQLPE----NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
+C Q+ENA +++ E NIRVIEM+ + +W RD GPT +VN +
Sbjct: 64 LCVPPLQYENAVARVSELENNNIRVIEMTNDDAWIRDCGPTFLVNDKG--------DLRA 115
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLT 178
+DW FN+WGG+ DG Y W D VARK+ E + + VLEGGSIHVDGEGT L
Sbjct: 116 VDWEFNAWGGLVDGLYFPWDQDALVARKVCEIEGVDSYKTKDFVLEGGSIHVDGEGTVLV 175
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
TE CLL+ +RNPHLTK IE++LK YL +K++W+ G+
Sbjct: 176 TEMCLLHLSRNPHLTKEDIEDKLKDYLNCVKVLWVKDGI 214
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I NGGII PQ+GD+ D A + + + FP +VVG+ R EI
Sbjct: 297 PREEGEMAIASYLNFLIVNGGIILPQYGDEN-DQLAKQQVQEMFPDRKVVGV-RTEEIAY 354
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQQPA
Sbjct: 355 GGGNIHCITQQQPA 368
>gi|298293447|ref|YP_003695386.1| agmatine deiminase [Starkeya novella DSM 506]
gi|296929958|gb|ADH90767.1| agmatine deiminase [Starkeya novella DSM 506]
Length = 363
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/215 (51%), Positives = 141/215 (65%), Gaps = 15/215 (6%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ PA G+ MPAEWEPH+ WM WP ER DNWR+ A AQ FA+VA AI++FEP+
Sbjct: 5 LTSLPAADGFRMPAEWEPHAGTWMIWP---ERPDNWREGAAPAQAAFAEVAAAIARFEPL 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ SA QW NAR LP ++R+IE + + SW RD+G T +V+ + ++ G+DW
Sbjct: 62 TMLVSARQWRNARDMLPASVRLIETTSDDSWCRDSGATFLVDAAG--------RLRGVDW 113
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG+ Y D +A K+L ER PR+ +VLEGGSIHVDGEGT LTTEEC
Sbjct: 114 QFNAWGGL----YAPHDQDEMIAAKMLEAERAPRYAAPLVLEGGSIHVDGEGTVLTTEEC 169
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
LLN NRNP ++ IE LK YLGV K++WL GL
Sbjct: 170 LLNPNRNPDFSREDIEQYLKDYLGVSKVLWLGAGL 204
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R G RL ASY NFYI NG I+ P D D EA +L+ FP +VVG+ REIVLG
Sbjct: 289 RGIGERLGASYANFYIGNGFILMPLL-DPAHDEEARGILATLFPDRQVVGVP-TREIVLG 346
Query: 289 GGNIHCITQQQP 300
GGNIHCITQQQP
Sbjct: 347 GGNIHCITQQQP 358
>gi|24378772|ref|NP_720727.1| agmatine deiminase [Streptococcus mutans UA159]
gi|449865253|ref|ZP_21778875.1| agmatine deiminase [Streptococcus mutans U2B]
gi|449869855|ref|ZP_21780322.1| agmatine deiminase [Streptococcus mutans 8ID3]
gi|449874765|ref|ZP_21781882.1| agmatine deiminase [Streptococcus mutans S1B]
gi|449905336|ref|ZP_21793085.1| agmatine deiminase [Streptococcus mutans M230]
gi|449915887|ref|ZP_21796548.1| agmatine deiminase [Streptococcus mutans 15JP3]
gi|449984742|ref|ZP_21819239.1| agmatine deiminase [Streptococcus mutans NFSM2]
gi|450011510|ref|ZP_21829186.1| agmatine deiminase [Streptococcus mutans A19]
gi|450024139|ref|ZP_21831049.1| agmatine deiminase [Streptococcus mutans U138]
gi|450082447|ref|ZP_21852373.1| agmatine deiminase [Streptococcus mutans N66]
gi|450116998|ref|ZP_21864785.1| agmatine deiminase [Streptococcus mutans ST1]
gi|73622176|sp|Q8DW17.1|AGUA_STRMU RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|24376642|gb|AAN58033.1|AE014875_10 conserved hypothetical protein [Streptococcus mutans UA159]
gi|44891112|tpg|DAA04558.1| TPA_exp: agmatine deiminase [Streptococcus mutans UA159]
gi|449155854|gb|EMB59344.1| agmatine deiminase [Streptococcus mutans 15JP3]
gi|449157495|gb|EMB60934.1| agmatine deiminase [Streptococcus mutans 8ID3]
gi|449179947|gb|EMB82135.1| agmatine deiminase [Streptococcus mutans NFSM2]
gi|449189491|gb|EMB91151.1| agmatine deiminase [Streptococcus mutans A19]
gi|449192330|gb|EMB93756.1| agmatine deiminase [Streptococcus mutans U138]
gi|449214415|gb|EMC14687.1| agmatine deiminase [Streptococcus mutans N66]
gi|449226576|gb|EMC26094.1| agmatine deiminase [Streptococcus mutans ST1]
gi|449254620|gb|EMC52523.1| agmatine deiminase [Streptococcus mutans S1B]
gi|449258296|gb|EMC55882.1| agmatine deiminase [Streptococcus mutans M230]
gi|449264364|gb|EMC61708.1| agmatine deiminase [Streptococcus mutans U2B]
Length = 369
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 136/219 (62%), Gaps = 16/219 (7%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N TP G+ MP E+E Q WM WP R DNWR A AQ+ F +VA AIS+FEPV+
Sbjct: 7 NTTPKQDGFRMPGEFEKQKQIWMLWPWRN---DNWRLGAKPAQKAFLEVAEAISEFEPVS 63
Query: 64 VCASAAQWENARSQLPE----NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
+C Q+ENA +++ E NIR+IEM+ + +W RD GPT +VN +
Sbjct: 64 LCVPPLQYENALARVSELGSHNIRIIEMTNDDAWIRDCGPTFLVNDKG--------DLRA 115
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLT 178
+DW FN+WGG+ DG Y W D VARK+ E + + VLEGGSIHVDGEGT L
Sbjct: 116 VDWEFNAWGGLVDGLYFPWDQDALVARKVCEIEGVDSYKTKDFVLEGGSIHVDGEGTVLV 175
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
TE CLL+ +RNPHLTK IE++LK YL +K++W+ G+
Sbjct: 176 TEMCLLHPSRNPHLTKEDIEDKLKDYLNCVKVLWVKDGI 214
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I NGGII PQ+GD+ D A + + + FP +VVG+ R EI
Sbjct: 297 PREEGEMAIASYLNFLIVNGGIILPQYGDEN-DQLAKQQVQEMFPDRKVVGV-RTEEIAY 354
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQQPA
Sbjct: 355 GGGNIHCITQQQPA 368
>gi|347731456|ref|ZP_08864552.1| agmatine deiminase [Desulfovibrio sp. A2]
gi|347519775|gb|EGY26924.1| agmatine deiminase [Desulfovibrio sp. A2]
Length = 363
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 127/351 (36%), Positives = 169/351 (48%), Gaps = 73/351 (20%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
PA G MPAEWEPH+ CWM WP W D A+ +A VA I++FEPVT+ A
Sbjct: 21 PACDGLHMPAEWEPHAGCWMAWPCPGPL---WLDALEPARASYAAVARTIARFEPVTMLA 77
Query: 67 SAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
+ A + + V+ + +W RD GPT +V+ + VAG+ W FN+
Sbjct: 78 RPEDAQAAATLCGAAVPVVPAPIEDAWMRDFGPTFLVDGAGG--------VAGVHWLFNA 129
Query: 127 WGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNK 186
WG Y + + D VA+ ILS + R+ +LEGGSIHVDG+GT +TTE+CLL+
Sbjct: 130 WGHT----YDEPTHDDGVAQLILSRLSMRRYAAPFILEGGSIHVDGQGTLITTEQCLLDP 185
Query: 187 NRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG-------------------MIH----- 222
RN +TK E AYLGV K++WL GL G ++H
Sbjct: 186 RRNAGMTKADFEELFTAYLGVRKVVWLGEGLEGDDTHGHVDIVASFARPGVVLLHRCDDP 245
Query: 223 -------------------------------DGEAKPRLAGTRLAASYVNFYIANGGIIT 251
D A+ G R+ SY+NFY+ANGGI+
Sbjct: 246 DDHNHAVYQDNLRRLELTTDACGRPFEIITIDQPARVDHGGKRMDLSYINFYVANGGIVM 305
Query: 252 PQFGDK--KWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
FG+ K D A L + FP EVV + + +I GGG IHCITQQQP
Sbjct: 306 SAFGESGDKLDRAACETLRRVFPGREVVQVA-SLDIFRGGGGIHCITQQQP 355
>gi|238798618|ref|ZP_04642093.1| agmatine deiminase [Yersinia mollaretii ATCC 43969]
gi|238717504|gb|EEQ09345.1| agmatine deiminase [Yersinia mollaretii ATCC 43969]
Length = 374
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/222 (44%), Positives = 132/222 (59%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++G P G+ MPAEW WM WP R DNWR + AQ+ FAKVA AIS+ PV
Sbjct: 16 LSGKPQQDGFFMPAEWAKQDAVWMLWPYRQ---DNWRGKGIPAQQTFAKVAEAISRTTPV 72
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A++ +P ++ ++EM+ + +W RDTGPT+V+N A + +DW
Sbjct: 73 FMGVPAEFMAQAKATMPASVTLVEMASDDAWMRDTGPTMVING--------AGERRAVDW 124
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG++ G Y DW D +VA ++ + +VLEGGSIH DGEGT LTT EC
Sbjct: 125 QFNAWGGLNGGLYSDWQQDEKVATQVSDFLNNAHYSAPLVLEGGSIHTDGEGTLLTTAEC 184
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNPHL + QIE L+ YLGV IWL G++ DG
Sbjct: 185 LLNPNRNPHLNQSQIEQLLREYLGVTHFIWLQDGVYNDETDG 226
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 225 EAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERARE 284
+A PR AG RLA SYVNF I+N II P D + DG A +L Q FP Y +VG+ ARE
Sbjct: 299 DAVPRTAGERLAGSYVNFLISNQQIIYPLL-DSRTDGLAQELLQQMFPDYTIVGVP-ARE 356
Query: 285 IVLGGGNIHCITQQQPAI 302
I+LGGGNIHCITQQ PA+
Sbjct: 357 ILLGGGNIHCITQQIPAV 374
>gi|347360598|emb|CCA89457.1| agmatine deiminase [Lactococcus lactis subsp. lactis]
Length = 366
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 102/213 (47%), Positives = 133/213 (62%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E Q +M WP ER DNWRD A Q F VA AIS+F PVT+
Sbjct: 9 TPKEDGFRMPGEFEAQDQIFMIWP---ERPDNWRDGAKPVQVAFTNVAKAISRFTPVTML 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S +Q++NAR QLP ++RV+E+S N SW RD GP+ V+N ++ D FN
Sbjct: 66 VSQSQYQNARYQLPADVRVLEVSNNDSWVRDCGPSFVINDKG--------ELRANDCTFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W D VA+K+ ER+ + VLEGGS HVDG+GT LTTE CLL
Sbjct: 118 AWGGLVDGLYFPWDQDDLVAQKVCELERVDSYRTDDFVLEGGSFHVDGQGTVLTTEMCLL 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
++ RNPH++K IEN+LK +L KI+WL G+
Sbjct: 178 SEGRNPHMSKEDIENKLKEHLNAEKILWLGDGI 210
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I N G+I PQ+GD+ D A++ + + FP E+VG+ E+V
Sbjct: 293 PREDGDICIASYMNFLITNKGVIVPQYGDEN-DALALKQVQEMFPDREIVGVNTV-EVVY 350
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQQP
Sbjct: 351 GGGNIHCITQQQP 363
>gi|238795050|ref|ZP_04638643.1| agmatine deiminase [Yersinia intermedia ATCC 29909]
gi|238725598|gb|EEQ17159.1| agmatine deiminase [Yersinia intermedia ATCC 29909]
Length = 374
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 129/222 (58%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ GTP G+ MPAEW WM WP R DNWR AQ+ FAKVA AIS PV
Sbjct: 16 LPGTPQQDGFFMPAEWAKQDAVWMLWPYRQ---DNWRGKGAPAQQTFAKVAAAISGTTPV 72
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A++ LP N+ ++EM+ + +W RDTGPT+V+N S +DW
Sbjct: 73 FMGVPAEFMAQAKATLPANVTLVEMASDDAWMRDTGPTMVINGSGERRA--------VDW 124
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG++ G Y +W D +VA ++ + +VLEGGSIH DGEGT LTT EC
Sbjct: 125 QFNAWGGLNGGLYANWQQDEKVAVQVSDFLHNAHYSAPLVLEGGSIHTDGEGTLLTTAEC 184
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNPHL + QIE L+ YLGV IWL G++ DG
Sbjct: 185 LLNPNRNPHLNQAQIEQLLREYLGVTHFIWLQDGVYNDETDG 226
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
Query: 225 EAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERARE 284
+A PR AG RLA SYVNF I+N II P D++ DG A +L Q FP + + G+ ARE
Sbjct: 299 DAVPRTAGERLAGSYVNFLISNQQIIYPLL-DERTDGLAQDLLQQMFPDFAITGVP-ARE 356
Query: 285 IVLGGGNIHCITQQQPA 301
I+LGGGNIHCITQQ P+
Sbjct: 357 ILLGGGNIHCITQQIPS 373
>gi|167646924|ref|YP_001684587.1| agmatine deiminase [Caulobacter sp. K31]
gi|167349354|gb|ABZ72089.1| agmatine deiminase [Caulobacter sp. K31]
Length = 374
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 110/222 (49%), Positives = 138/222 (62%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MPAEWEPH+ CWM WP ER DNWR A AQ F VA AI + EPV
Sbjct: 5 LTTTPRADGFHMPAEWEPHAGCWMLWP---ERSDNWRGGAKPAQHAFVAVAAAIVQGEPV 61
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TVC S AQ+ AR L +RV+EM+ N SW RD GPT V++ +A +V G+DW
Sbjct: 62 TVCVSPAQYVIAREMLDPAVRVVEMTSNDSWIRDCGPTFVID--------EAGRVRGVDW 113
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG+ G Y W D V K++ E R+ +LEGGSI VDG+GT L T+EC
Sbjct: 114 KFNAWGGLIGGLYFPWDQDDLVGEKVIELEGDDRYGPDFILEGGSIDVDGQGTVLATKEC 173
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNP L +G+IE L+ YLGV +IWL +G++ DG
Sbjct: 174 LLNPNRNPGLGQGEIEQRLRDYLGVETVIWLDQGVYLDETDG 215
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR AG R+AASYVNFY+ NG ++ P F D D A +L++ FP ++ + AREI+L
Sbjct: 292 PREAGDRMAASYVNFYVGNGVVVAPAF-DDPMDAPAQALLAKLFPGRRILPVP-AREILL 349
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQ+P
Sbjct: 350 GGGNIHCITQQEP 362
>gi|387786886|ref|YP_006251982.1| agmatine deiminase [Streptococcus mutans LJ23]
gi|379133287|dbj|BAL70039.1| agmatine deiminase [Streptococcus mutans LJ23]
Length = 369
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 135/219 (61%), Gaps = 16/219 (7%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N TP G+ MP E+E Q WM WP R DNWR A AQ+ F +VA AIS+FEPV+
Sbjct: 7 NTTPKQDGFRMPGEFEKQKQIWMLWPWRN---DNWRLGAKPAQKAFLEVAEAISEFEPVS 63
Query: 64 VCASAAQWENARSQLPE----NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
+C Q+ENA +++ E NIR+IEM+ + +W RD GPT +VN +
Sbjct: 64 LCVPPLQYENALARVSELGSHNIRIIEMTNDDAWIRDCGPTFLVNDKG--------DLRA 115
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLT 178
+DW FN+WGG+ DG Y W D VARK+ E + + VLEGGSIHVDGEGT L
Sbjct: 116 VDWEFNAWGGLVDGLYFPWDQDALVARKVCEIEGVDSYKTKDFVLEGGSIHVDGEGTVLV 175
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
TE CLL+ +RNPHLTK IE++LK YL K++W+ G+
Sbjct: 176 TEMCLLHPSRNPHLTKEDIEDKLKDYLNCEKVLWIKDGI 214
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I NGGII PQ+GD+ D A + + + FP +VVG+ R EI
Sbjct: 297 PREEGEMAIASYLNFLIVNGGIILPQYGDEN-DQLAKQQVQEMFPDRKVVGV-RTEEIAY 354
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQQPA
Sbjct: 355 GGGNIHCITQQQPA 368
>gi|154253245|ref|YP_001414069.1| agmatine deiminase [Parvibaculum lavamentivorans DS-1]
gi|154157195|gb|ABS64412.1| Agmatine deiminase [Parvibaculum lavamentivorans DS-1]
Length = 346
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 135/357 (37%), Positives = 170/357 (47%), Gaps = 74/357 (20%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M TPA G MPAEWEPH +CWM WP R E W + A +A+VA AIS FE
Sbjct: 1 MNETRTPADEGLFMPAEWEPHERCWMQWPCRTEV---WGERLPQAYAAYAQVARAISSFE 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
PV++ R N+ + + ++ SW RD+GP V++ VAG
Sbjct: 58 PVSMVCKPEDEAQVRLACGRNVETVALPIDDSWARDSGPIFVIDGKG--------HVAGT 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
W FN+WG Y ++ D V IL + ++ MV EGGSI VDG GT LTTE
Sbjct: 110 HWRFNAWGNA----YHNYDADAAVGGVILERLGMRKYQGGMVFEGGSISVDGYGTLLTTE 165
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG----------------------LF 218
ECLLN NRNP LT+ QIE L LGV +IIWL +G L
Sbjct: 166 ECLLNDNRNPGLTRQQIEEALALNLGVARIIWLDQGLEDDETSGHVDMVASFAGAGRVLL 225
Query: 219 GMIHDG---------EAKPRLAGTRLA--------------------------ASYVNFY 243
M D E + RL R A SYVN Y
Sbjct: 226 HMPEDKSDPNYARMQENRARLEAVRDARGQKLEVIEIPQPKRNLKREDGRRLCTSYVNAY 285
Query: 244 IANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
IANGG++ P + D D +A V+++AFP ++V + A EI GGG+IHCITQQQP
Sbjct: 286 IANGGVVMPTYEDPN-DQKAAAVMAEAFPGRKIVSVP-ALEIARGGGSIHCITQQQP 340
>gi|449911317|ref|ZP_21795065.1| agmatine deiminase [Streptococcus mutans OMZ175]
gi|449989317|ref|ZP_21820994.1| agmatine deiminase [Streptococcus mutans NVAB]
gi|450063196|ref|ZP_21844789.1| agmatine deiminase [Streptococcus mutans NLML5]
gi|450086121|ref|ZP_21853498.1| agmatine deiminase [Streptococcus mutans NV1996]
gi|450127220|ref|ZP_21868521.1| agmatine deiminase [Streptococcus mutans U2A]
gi|449182690|gb|EMB84702.1| agmatine deiminase [Streptococcus mutans NVAB]
gi|449205007|gb|EMC05778.1| agmatine deiminase [Streptococcus mutans NLML5]
gi|449219853|gb|EMC19797.1| agmatine deiminase [Streptococcus mutans NV1996]
gi|449230990|gb|EMC30221.1| agmatine deiminase [Streptococcus mutans U2A]
gi|449258392|gb|EMC55973.1| agmatine deiminase [Streptococcus mutans OMZ175]
Length = 369
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 135/219 (61%), Gaps = 16/219 (7%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N TP G+ MP E+E Q WM WP R DNWR A AQ+ F +VA AIS+FEPV+
Sbjct: 7 NTTPKQDGFRMPGEFEKQKQIWMLWPWRN---DNWRLGAKPAQKAFLEVAEAISEFEPVS 63
Query: 64 VCASAAQWENARSQLPE----NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
+C Q+ENA +++ E NIR+IEM+ + +W RD GPT +VN +
Sbjct: 64 LCVPPLQYENALARVSELGSHNIRIIEMTNDDAWIRDCGPTFLVNDKG--------DLRA 115
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLT 178
+DW FN+WGG+ DG Y W D VARK+ E + + VLEGGSIHVDGEGT L
Sbjct: 116 VDWEFNAWGGLVDGLYFPWDQDALVARKVCEIEGVDSYKTKDFVLEGGSIHVDGEGTVLV 175
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
TE CLL+ +RNPHLTK IE++LK YL K++W+ G+
Sbjct: 176 TEMCLLHPSRNPHLTKEDIEDKLKDYLNCEKVLWVKDGI 214
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I NGGII PQ+GD+ D A + + + FP +VVG+ R EI
Sbjct: 297 PREEGEMAIASYLNFLIVNGGIILPQYGDEN-DQLAKQQVQEMFPDRKVVGV-RTEEIAY 354
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQQPA
Sbjct: 355 GGGNIHCITQQQPA 368
>gi|397649008|ref|YP_006489535.1| agmatine deiminase [Streptococcus mutans GS-5]
gi|392602577|gb|AFM80741.1| agmatine deiminase [Streptococcus mutans GS-5]
Length = 369
Score = 199 bits (507), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 135/219 (61%), Gaps = 16/219 (7%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N TP G+ MP E+E Q WM WP R DNWR A AQ+ F +VA AIS+FEPV+
Sbjct: 7 NTTPKQDGFRMPGEFEKQKQIWMLWPWRN---DNWRLGAKPAQKAFLEVAEAISEFEPVS 63
Query: 64 VCASAAQWENARSQLPE----NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
+C Q+ENA +++ E NIR+IEM+ + +W RD GPT +VN +
Sbjct: 64 LCVPPLQYENALARVSELGSHNIRIIEMTNDDAWIRDCGPTFLVNDKG--------DLRA 115
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLT 178
+DW FN+WGG+ DG Y W D VARK+ E + + VLEGGSIHVDGEGT L
Sbjct: 116 VDWEFNAWGGLVDGLYFPWDQDALVARKVCEIEGVDSYKTKDFVLEGGSIHVDGEGTVLV 175
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
TE CLL+ +RNPHLTK IE++LK YL K++W+ G+
Sbjct: 176 TEMCLLHPSRNPHLTKEDIEDKLKDYLNCEKVLWVKDGI 214
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I NGGII PQ+GD+ D A + + + FP +VVG+ R EI
Sbjct: 297 PREEGEMAIASYLNFLIVNGGIILPQYGDEN-DQLAKQQVQEMFPDRKVVGV-RTEEIAY 354
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQQPA
Sbjct: 355 GGGNIHCITQQQPA 368
>gi|450107489|ref|ZP_21861065.1| agmatine deiminase [Streptococcus mutans SF14]
gi|449221902|gb|EMC21653.1| agmatine deiminase [Streptococcus mutans SF14]
Length = 369
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 135/219 (61%), Gaps = 16/219 (7%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N TP G+ MP E+E Q WM WP R DNWR A AQ+ F +VA AIS+FEPV+
Sbjct: 7 NTTPKQDGFRMPGEFEKQKQIWMLWPWRN---DNWRLGAKPAQKAFLEVAEAISEFEPVS 63
Query: 64 VCASAAQWENARSQLPE----NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
+C Q+ENA +++ E NIR+IEM+ + +W RD GPT +VN +
Sbjct: 64 LCVPPLQYENALARVSELGSHNIRIIEMTNDDAWIRDCGPTFLVNDKG--------DLRA 115
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLT 178
+DW FN+WGG+ DG Y W D VARK+ E + + VLEGGSIHVDGEGT L
Sbjct: 116 VDWEFNAWGGLVDGLYFPWDQDALVARKVCEIEGVDSYKTKGFVLEGGSIHVDGEGTVLV 175
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
TE CLL+ +RNPHLTK IE++LK YL K++W+ G+
Sbjct: 176 TEMCLLHPSRNPHLTKEDIEDKLKDYLNCEKVLWVKDGI 214
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I NGGII PQ+GD+ D A + + + FP +VVG+ R EI
Sbjct: 297 PREEGEMAIASYLNFLIVNGGIILPQYGDEN-DQLAKQQVQEMFPDRKVVGV-RTEEIAY 354
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQQPA
Sbjct: 355 GGGNIHCITQQQPA 368
>gi|449944833|ref|ZP_21806906.1| agmatine deiminase [Streptococcus mutans 11A1]
gi|449148333|gb|EMB52217.1| agmatine deiminase [Streptococcus mutans 11A1]
Length = 369
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 135/219 (61%), Gaps = 16/219 (7%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N TP G+ MP E+E Q WM WP R DNWR A AQ+ F +VA AIS+FEPV+
Sbjct: 7 NTTPKQDGFRMPGEFEKQKQIWMLWPWRN---DNWRLGAKPAQKAFLEVAEAISEFEPVS 63
Query: 64 VCASAAQWENARSQLPE----NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
+C Q+ENA +++ E NIR+IEM+ + +W RD GPT +VN +
Sbjct: 64 LCVPPLQYENALARVSELGSYNIRIIEMTNDDAWIRDCGPTFLVNDKG--------DLRA 115
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLT 178
+DW FN+WGG+ DG Y W D V RK+ E + + VLEGGSIHVDGEGT L
Sbjct: 116 VDWEFNAWGGLVDGLYFPWDQDALVTRKVCEIEGVDSYKTKDFVLEGGSIHVDGEGTVLV 175
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
TE CLL+ +RNPHLTK IE++LK YL +K++W+ G+
Sbjct: 176 TEMCLLHPSRNPHLTKEDIEDKLKDYLNCVKVLWVKDGI 214
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I NGGII PQ+GD+ D A + + + FP +VVG+ R EI
Sbjct: 297 PREEGEMAIASYLNFLIVNGGIILPQYGDEN-DQLAKQQVQEMFPDRKVVGV-RTEEIAY 354
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQQPA
Sbjct: 355 GGGNIHCITQQQPA 368
>gi|257086093|ref|ZP_05580454.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|422724276|ref|ZP_16780755.1| agmatine deiminase [Enterococcus faecalis TX2137]
gi|424675599|ref|ZP_18112498.1| agmatine deiminase [Enterococcus faecalis 599]
gi|256994123|gb|EEU81425.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|315025767|gb|EFT37699.1| agmatine deiminase [Enterococcus faecalis TX2137]
gi|402350864|gb|EJU85761.1| agmatine deiminase [Enterococcus faecalis 599]
Length = 365
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 128/213 (60%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+EP + WM WP ER DNWRD Q F VA AIS+F P+ V
Sbjct: 9 TPKQDGFRMPGEFEPQEKVWMIWP---ERPDNWRDGGKPVQEAFTNVAKAISQFTPMNVV 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S Q++N R QLP+ I V EMS N +W RD GP+ V+N ++ G+DW FN
Sbjct: 66 VSQQQFQNCRRQLPQEITVYEMSNNDAWVRDCGPSFVINDHG--------EIRGVDWTFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W D VA+KI E + + VLEGGS HVDG+GT LTTE CLL
Sbjct: 118 AWGGLVDGLYFPWDQDDLVAQKICEIEHVDSYRTDDFVLEGGSFHVDGQGTVLTTEMCLL 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
++ RNP L+K IE +L YL V K++WL G+
Sbjct: 178 SEGRNPQLSKEAIEQKLCDYLNVEKVLWLGDGI 210
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I N G+I PQ+GD+ D A+ + FP ++VG+ E+V
Sbjct: 293 PREDGDICIASYMNFLITNDGVIVPQYGDEN-DCLALEQVQTMFPDKKIVGVNTV-EVVY 350
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQ+P
Sbjct: 351 GGGNIHCITQQEP 363
>gi|450040734|ref|ZP_21836984.1| agmatine deiminase [Streptococcus mutans T4]
gi|449198533|gb|EMB99642.1| agmatine deiminase [Streptococcus mutans T4]
Length = 369
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 135/219 (61%), Gaps = 16/219 (7%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N TP G+ MP E+E Q WM WP R DNWR A AQ+ F +VA AIS+FEPV+
Sbjct: 7 NTTPKQDGFRMPGEFEKQKQIWMLWPWRN---DNWRLGAKPAQKAFLEVAEAISEFEPVS 63
Query: 64 VCASAAQWENARSQLPE----NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
+C Q+ENA +++ E NIR+IEM+ + +W RD GPT +VN +
Sbjct: 64 LCVPPLQYENALARVSELGSHNIRIIEMTNDDAWIRDCGPTFLVNDKG--------DLRA 115
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLT 178
+DW FN+WGG+ DG Y W D V RK+ E + + VLEGGSIHVDGEGT L
Sbjct: 116 VDWEFNAWGGLVDGLYFPWDQDALVTRKVCEIEGVDSYKTKDFVLEGGSIHVDGEGTVLV 175
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
TE CLL+ +RNPHLTK IE++LK YL +K++W+ G+
Sbjct: 176 TEMCLLHPSRNPHLTKEDIEDKLKDYLNCVKVLWVKDGI 214
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I NGGII PQ+GD+ D A + + + FP +VVG+ R EI
Sbjct: 297 PREEGEMAIASYLNFLIVNGGIILPQYGDEN-DQLAKQQVQEMFPDRKVVGV-RTEEIAY 354
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQQPA
Sbjct: 355 GGGNIHCITQQQPA 368
>gi|449935293|ref|ZP_21803283.1| agmatine deiminase [Streptococcus mutans 2ST1]
gi|450077517|ref|ZP_21850497.1| agmatine deiminase [Streptococcus mutans N3209]
gi|450153689|ref|ZP_21877319.1| agmatine deiminase [Streptococcus mutans 21]
gi|449166747|gb|EMB69671.1| agmatine deiminase [Streptococcus mutans 2ST1]
gi|449211111|gb|EMC11529.1| agmatine deiminase [Streptococcus mutans N3209]
gi|449238471|gb|EMC37233.1| agmatine deiminase [Streptococcus mutans 21]
Length = 369
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 135/219 (61%), Gaps = 16/219 (7%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N TP G+ MP E+E Q WM WP R DNWR AQ+ F +VA AIS+FEPV+
Sbjct: 7 NTTPKQDGFRMPGEFEKQKQIWMLWPWRN---DNWRLGTKPAQKAFLEVAEAISEFEPVS 63
Query: 64 VCASAAQWENARSQLPE----NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
+C Q+ENA +++ E NIR+IEM+ + +W RD GPT +VN +
Sbjct: 64 LCVPPLQYENALARVSELGSHNIRIIEMTNDDAWIRDCGPTFLVNDKG--------DLRA 115
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLT 178
+DW FN+WGG+ DG Y W D VARK+ E + + VLEGGSIHVDGEGT L
Sbjct: 116 VDWEFNAWGGLVDGLYFPWDQDALVARKVCEIEGVDSYKTKDFVLEGGSIHVDGEGTVLV 175
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
TE CLL+ +RNPHLTK IE++LK YL +K++W+ G+
Sbjct: 176 TEMCLLHPSRNPHLTKEDIEDKLKDYLNCVKVLWVKDGI 214
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I NGGII PQ+GD+ D A + + + FP +VVG+ R EI
Sbjct: 297 PREEGEMAIASYLNFLIVNGGIILPQYGDEN-DQLAKQQVQEMFPDRKVVGV-RTEEIAY 354
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQQPA
Sbjct: 355 GGGNIHCITQQQPA 368
>gi|449896214|ref|ZP_21789541.1| agmatine deiminase [Streptococcus mutans R221]
gi|449950404|ref|ZP_21808246.1| agmatine deiminase [Streptococcus mutans 11SSST2]
gi|450133992|ref|ZP_21870904.1| agmatine deiminase [Streptococcus mutans NLML8]
gi|449150199|gb|EMB53973.1| agmatine deiminase [Streptococcus mutans NLML8]
gi|449167204|gb|EMB70101.1| agmatine deiminase [Streptococcus mutans 11SSST2]
gi|449262673|gb|EMC60119.1| agmatine deiminase [Streptococcus mutans R221]
Length = 369
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 134/219 (61%), Gaps = 16/219 (7%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N TP G+ MP E+E Q WM WP R DNWR A AQ+ F +VA AIS+FEPV+
Sbjct: 7 NTTPKQDGFRMPGEFEKQKQIWMLWPWRN---DNWRLGAKPAQKAFLEVAEAISEFEPVS 63
Query: 64 VCASAAQWENARSQLPE----NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
+C Q+ENA +++ E NIR+IEM+ + +W RD GPT +VN +
Sbjct: 64 LCVPPLQYENALARVSELGSHNIRIIEMTNDDAWIRDCGPTFLVNDKG--------DLRA 115
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLT 178
+DW FN+WGG+ DG Y W D VARK+ E + + VLEGGSIHVDGEGT L
Sbjct: 116 VDWEFNAWGGLVDGLYFPWDQDALVARKVCEIEGVDSYKTKDFVLEGGSIHVDGEGTVLV 175
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
TE CLL+ RNPHLTK IE++LK YL K++W+ G+
Sbjct: 176 TEMCLLHPGRNPHLTKEDIEDKLKDYLNCEKVLWVKDGI 214
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I NGGII PQ+GD+ D A + + + FP +VVG+ R EI
Sbjct: 297 PREEGEMAIASYLNFLIVNGGIILPQYGDEN-DQLAKQQVQEMFPDRKVVGV-RTEEIAY 354
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQQPA
Sbjct: 355 GGGNIHCITQQQPA 368
>gi|374336006|ref|YP_005092693.1| agmatine deiminase [Oceanimonas sp. GK1]
gi|372985693|gb|AEY01943.1| agmatine deiminase [Oceanimonas sp. GK1]
Length = 356
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/217 (45%), Positives = 130/217 (59%), Gaps = 11/217 (5%)
Query: 8 ALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCAS 67
AL G+ MPAEW P WM WP R DNWR+ AQ FA++A AIS PV +
Sbjct: 3 ALKGFYMPAEWAPQQAVWMIWP---HRPDNWREHGAPAQATFARLAEAISAVTPVYMAVP 59
Query: 68 AAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSW 127
AA + A + +P + ++E+ + +W RDTGPT+VV+ + GIDW FN+W
Sbjct: 60 AADMDQASATMPAAVTLVEIDSDDAWARDTGPTVVVDGQGG--------IKGIDWRFNAW 111
Query: 128 GGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
GG G Y W D +A+ +L+ ++P +VLEGGSIHVDGEGT LTT+ECLLN N
Sbjct: 112 GGDHGGLYAPWDRDQAMAQAMLAQHQIPAVESPLVLEGGSIHVDGEGTLLTTKECLLNAN 171
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
RNPHL++ +IE L+ LGV IWL G++ DG
Sbjct: 172 RNPHLSQAEIEQHLRDTLGVTTFIWLDEGVYMDETDG 208
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
I G PR AG RLAASYVNF I NG ++ P D + DGEA L FP+ EVVGI
Sbjct: 277 IASGSGVPRPAGERLAASYVNFLITNGRLLFPLL-DPRTDGEAKSRLETIFPELEVVGIP 335
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ PA
Sbjct: 336 -AREILLGGGNIHCITQQIPA 355
>gi|449886817|ref|ZP_21786458.1| agmatine deiminase [Streptococcus mutans SA41]
gi|449253719|gb|EMC51662.1| agmatine deiminase [Streptococcus mutans SA41]
Length = 369
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 135/219 (61%), Gaps = 16/219 (7%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N TP G+ MP E+E Q WM WP R DNWR A AQ+ F +VA AIS+FEP++
Sbjct: 7 NTTPKQDGFRMPGEFEKQKQIWMLWPWRN---DNWRLGAKPAQKAFLEVAEAISEFEPIS 63
Query: 64 VCASAAQWENARSQLPE----NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
+C Q+ENA +++ E NIR+IEM+ + +W RD GPT +VN +
Sbjct: 64 LCVPPLQYENALARVSELGSHNIRIIEMTNDDAWIRDCGPTFLVNDKG--------DLRA 115
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLT 178
+DW FN+WGG+ DG Y W D V RK+ E + + VLEGGSIHVDGEGT L
Sbjct: 116 VDWEFNAWGGLVDGLYFPWDQDALVTRKVCEIEGVDSYKTKDFVLEGGSIHVDGEGTVLV 175
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
TE CLL+ +RNPHLTK IE++LK YL +K++W+ G+
Sbjct: 176 TEMCLLHPSRNPHLTKEDIEDKLKDYLNCVKVLWVKDGI 214
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I NGGII PQ+GD+ D A + + + FP +VVG+ R EI
Sbjct: 297 PREEGEMAIASYLNFLIVNGGIILPQYGDEN-DQLAKQQVQEMFPDRKVVGV-RTEEIAY 354
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQQPA
Sbjct: 355 GGGNIHCITQQQPA 368
>gi|422703950|ref|ZP_16761766.1| agmatine deiminase [Enterococcus faecalis TX1302]
gi|315164572|gb|EFU08589.1| agmatine deiminase [Enterococcus faecalis TX1302]
Length = 365
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 127/213 (59%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+EP + WM WP ER DNWRD Q F VA AIS+F P+ V
Sbjct: 9 TPKQDGFRMPGEFEPQEKVWMIWP---ERPDNWRDGGKPVQEAFTNVAKAISQFTPINVV 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S Q++N R QLP I V EMS N +W RD GP+ V+N ++ G+DW FN
Sbjct: 66 VSQQQFQNCRRQLPPEITVYEMSNNDAWVRDCGPSFVINDHG--------EIRGVDWTFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W D VA+KI E + + VLEGGS HVDG+GT LTTE CLL
Sbjct: 118 AWGGLVDGLYFPWDQDDLVAQKICEIEHVDSYRTDDFVLEGGSFHVDGQGTVLTTEMCLL 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
++ RNP L+K IE +L YL V K++WL G+
Sbjct: 178 SEGRNPQLSKEAIEQKLCDYLNVEKVLWLGDGI 210
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 215 RGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKY 274
+G F + PR G ASY+NF I N G+I PQ+GD+ D A+ + FP
Sbjct: 280 KGSFKIDFVEGTMPREDGDICIASYMNFLITNDGVIVPQYGDEN-DRLALEQVQTMFPDK 338
Query: 275 EVVGIERAREIVLGGGNIHCITQQQP 300
++VG+ E+V GGGNIHCITQQ+P
Sbjct: 339 KIVGVNTV-EVVYGGGNIHCITQQEP 363
>gi|120598075|ref|YP_962649.1| agmatine deiminase [Shewanella sp. W3-18-1]
gi|146293854|ref|YP_001184278.1| agmatine deiminase [Shewanella putrefaciens CN-32]
gi|166919517|sp|A4Y946.1|AGUA_SHEPC RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|166919519|sp|A1RHF0.1|AGUA_SHESW RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|120558168|gb|ABM24095.1| Porphyromonas-type peptidyl-arginine deiminase [Shewanella sp.
W3-18-1]
gi|145565544|gb|ABP76479.1| Porphyromonas-type peptidyl-arginine deiminase [Shewanella
putrefaciens CN-32]
Length = 370
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/222 (45%), Positives = 132/222 (59%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ P+ G+ MPAEW WM WP R DNWR +AQ FAKVA AI PV
Sbjct: 11 LTTKPSQDGFYMPAEWAAQQAVWMIWPYR---PDNWRAAGAYAQATFAKVADAIGAATPV 67
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A++ +P ++ ++EM N W RDTGPT+VVN + + G+DW
Sbjct: 68 YMGVPKAFLAEAKAVMPSHVTLVEMDSNDCWARDTGPTVVVNDNG--------ECRGVDW 119
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG + G Y W D QVA+++L+ R+ ++LEGGSIHVDGEGTC+T+ EC
Sbjct: 120 GFNAWGGHNGGLYFPWDKDEQVAQQMLAQHGFARYSAPLILEGGSIHVDGEGTCMTSAEC 179
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNP LTK QIE+ L+ YL V + IWL G++ DG
Sbjct: 180 LLNANRNPELTKEQIEDLLRDYLNVKQFIWLQDGVYMDETDG 221
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ +G PR AG RLA SYVNF I N I+ P D D A + L + FP++E+VG+
Sbjct: 290 VTEGTGVPRTAGERLAGSYVNFLITNHRIVFPLL-DPATDDIAAQKLQEIFPEHEIVGVP 348
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ PA
Sbjct: 349 -AREILLGGGNIHCITQQIPA 368
>gi|126031144|pdb|2JER|A Chain A, Agmatine Deiminase Of Enterococcus Faecalis Catalyzing Its
Reaction.
gi|126031145|pdb|2JER|B Chain B, Agmatine Deiminase Of Enterococcus Faecalis Catalyzing Its
Reaction.
gi|126031146|pdb|2JER|C Chain C, Agmatine Deiminase Of Enterococcus Faecalis Catalyzing Its
Reaction.
gi|126031147|pdb|2JER|D Chain D, Agmatine Deiminase Of Enterococcus Faecalis Catalyzing Its
Reaction.
gi|126031148|pdb|2JER|E Chain E, Agmatine Deiminase Of Enterococcus Faecalis Catalyzing Its
Reaction.
gi|126031149|pdb|2JER|F Chain F, Agmatine Deiminase Of Enterococcus Faecalis Catalyzing Its
Reaction.
gi|126031150|pdb|2JER|G Chain G, Agmatine Deiminase Of Enterococcus Faecalis Catalyzing Its
Reaction.
gi|126031151|pdb|2JER|H Chain H, Agmatine Deiminase Of Enterococcus Faecalis Catalyzing Its
Reaction
Length = 389
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 127/213 (59%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+EP + WM WP ER DNWRD Q F VA AIS+F P+ V
Sbjct: 9 TPKQDGFRMPGEFEPQEKVWMIWP---ERPDNWRDGGKPVQEAFTNVAKAISQFTPMNVV 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S Q++N R QLP I V EMS N +W RD GP+ V+N ++ G+DW FN
Sbjct: 66 VSQQQFQNCRRQLPPEITVYEMSNNDAWVRDCGPSFVINDHG--------EIRGVDWTFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W D VA+KI E + + VLEGGS HVDG+GT LTTE CLL
Sbjct: 118 AWGGLVDGLYFPWDQDDLVAQKICEIEHVDSYRTDDFVLEGGSFHVDGQGTVLTTEMCLL 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
++ RNP L+K IE +L YL V K++WL G+
Sbjct: 178 SEGRNPQLSKEAIEQKLCDYLNVEKVLWLGDGI 210
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 215 RGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKY 274
+G F + PR G ASY+NF I N G+I PQ+GD+ D A+ + FP
Sbjct: 280 KGSFKIDFVEGTMPREDGDICIASYMNFLITNDGVIVPQYGDEN-DRLALEQVQTMFPDK 338
Query: 275 EVVGIERAREIVLGGGNIHCITQQQP 300
++VG+ E+V GGGNIH ITQQ+P
Sbjct: 339 KIVGVNTV-EVVYGGGNIHXITQQEP 363
>gi|217972416|ref|YP_002357167.1| agmatine deiminase [Shewanella baltica OS223]
gi|254802192|sp|B8E8S8.1|AGUA_SHEB2 RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|217497551|gb|ACK45744.1| agmatine deiminase [Shewanella baltica OS223]
Length = 370
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/222 (45%), Positives = 131/222 (59%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ P+ G+ MPAEW WM WP R DNWR +AQ FAKVA AI PV
Sbjct: 11 LTTKPSQDGFYMPAEWAAQQAVWMIWPYR---PDNWRSAGAYAQATFAKVADAIGAATPV 67
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A++ +P ++ ++EM N W RDTGPT+VVN + + G+DW
Sbjct: 68 YMGVPKAFLAEAKTVMPSHVTLVEMDSNDCWARDTGPTVVVNDNG--------ECRGVDW 119
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG + G Y W D QVA+++L R+ ++LEGGSIHVDGEGTC+T+ EC
Sbjct: 120 GFNAWGGHNGGLYFPWDKDEQVAQQMLKQHGFARYSAPLILEGGSIHVDGEGTCMTSAEC 179
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNP LTK QIE+ L+ YL V + IWL G++ DG
Sbjct: 180 LLNANRNPDLTKEQIEDLLRDYLNVKQFIWLQDGVYMDETDG 221
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ +G PR AG RLA SYVNF I N I+ P D D A + L + FP+YE+VG+
Sbjct: 290 VTEGTGVPRTAGERLAGSYVNFLITNNRIVFPLL-DPATDDIAAQKLQEIFPEYEIVGVP 348
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ P+
Sbjct: 349 -AREILLGGGNIHCITQQIPS 368
>gi|160876388|ref|YP_001555704.1| agmatine deiminase [Shewanella baltica OS195]
gi|378709589|ref|YP_005274483.1| agmatine deiminase [Shewanella baltica OS678]
gi|189027501|sp|A9KYH3.1|AGUA_SHEB9 RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|160861910|gb|ABX50444.1| agmatine deiminase [Shewanella baltica OS195]
gi|315268578|gb|ADT95431.1| agmatine deiminase [Shewanella baltica OS678]
Length = 370
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 131/223 (58%), Gaps = 11/223 (4%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++ P+ G+ MPAEW WM WP R DNWR +AQ FAKVA AI P
Sbjct: 10 QLTTKPSQDGFYMPAEWAAQQAVWMIWPYR---PDNWRSAGAYAQATFAKVADAIGGATP 66
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
V + A A++ +P ++ ++EM N W RDTGPT+VVN + G+D
Sbjct: 67 VYMGVPKAFLAEAKTVMPSHVTLVEMDSNDCWARDTGPTVVVNAEG--------ECRGVD 118
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
W FN+WGG + G Y W D QVA+++L R+ ++LEGGSIHVDGEGTC+T+ E
Sbjct: 119 WGFNAWGGHNGGLYFPWDKDEQVAQQMLKQHGFARYSAPLILEGGSIHVDGEGTCMTSAE 178
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
CLLN NRNP LTK QIE+ L+ YL V + IWL G++ DG
Sbjct: 179 CLLNANRNPDLTKEQIEDLLRDYLNVKQFIWLQDGVYMDETDG 221
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ +G PR AG RLA SYVNF I N I+ P D D A + L + FP+YE+VG+
Sbjct: 290 VTEGTGVPRTAGERLAGSYVNFLITNNRIVFPLL-DPTTDDIAAQKLQEIFPEYEIVGVP 348
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ P+
Sbjct: 349 -AREILLGGGNIHCITQQIPS 368
>gi|251791573|ref|YP_003006294.1| agmatine deiminase [Dickeya zeae Ech1591]
gi|247540194|gb|ACT08815.1| agmatine deiminase [Dickeya zeae Ech1591]
Length = 365
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/221 (47%), Positives = 135/221 (61%), Gaps = 13/221 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWR--DDALHAQRVFAKVATAISKFEPVT 63
TP G+ MPAEW PH WM WP R DNWR DA+ AQR FA VA AI++ PV
Sbjct: 6 TPLQDGFAMPAEWAPHDAVWMLWPYRR---DNWRMQGDAIPAQRTFAAVAAAIAQTTPVI 62
Query: 64 VCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWN 123
+ Q A+S +P + ++EM + +W RDTGPT+V+N +A + G+DW
Sbjct: 63 MGVPRDQMALAKSVMPAGVTLVEMESDDAWVRDTGPTVVLN--------EAGERRGVDWQ 114
Query: 124 FNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECL 183
FN+WGG G Y DW D +VA ++L+ R+ ++LEGGSIH DGEGT LTT ECL
Sbjct: 115 FNAWGGALGGLYEDWRRDEKVAAQVLAHHGDARYAAPLILEGGSIHTDGEGTLLTTAECL 174
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LN NRNPHL+K QIE L+ YLGV IWL G++ DG
Sbjct: 175 LNPNRNPHLSKAQIEQHLRDYLGVSAFIWLEEGVYNDETDG 215
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ +G A R AG+RLA SYVNF I+N II P D++ DGEA +L Q FP Y + G+
Sbjct: 284 VTEGNAIERNAGSRLAGSYVNFLISNKQIIYPLL-DERTDGEAHALLQQMFPDYLISGVP 342
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ PA
Sbjct: 343 -AREILLGGGNIHCITQQIPA 362
>gi|114562791|ref|YP_750304.1| agmatine deiminase [Shewanella frigidimarina NCIMB 400]
gi|122300055|sp|Q083U9.1|AGUA_SHEFN RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|114334084|gb|ABI71466.1| Porphyromonas-type peptidyl-arginine deiminase [Shewanella
frigidimarina NCIMB 400]
Length = 370
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 130/223 (58%), Gaps = 11/223 (4%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++ P+ G+ MPAEW WM WP R DNWR +AQ FAKVA AI P
Sbjct: 10 QLTTKPSQDGFSMPAEWAQQQAVWMIWPYR---PDNWRSAGAYAQATFAKVADAIGAVTP 66
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
V + A A++ +P ++ ++E+ N W RDTGPT+VVN + G+D
Sbjct: 67 VYMGVPKAFLAQAKTVMPAHVTLVEIDSNDCWARDTGPTVVVNAKG--------ECRGVD 118
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
W FN+WGG + G Y W D VA+K+L+ R+ ++LEGGSIHVDGEGTC+TT E
Sbjct: 119 WGFNAWGGDNGGLYSPWDKDELVAQKMLTQHGFDRYQAPLILEGGSIHVDGEGTCMTTAE 178
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
CLLN NRNP LT+ QIE L YL V + IWLP G++ DG
Sbjct: 179 CLLNSNRNPDLTREQIEALLAEYLNVKQFIWLPDGVYMDETDG 221
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ +G PR AG RLA SY NF I N I+ P D D A + L + FP+YE+VG+
Sbjct: 290 VAEGTGVPRTAGERLAGSYANFLITNNRIVFPLL-DPVTDDIAAQKLQEIFPEYEIVGVP 348
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ P+
Sbjct: 349 -AREILLGGGNIHCITQQIPS 368
>gi|255971193|ref|ZP_05421779.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|255962211|gb|EET94687.1| conserved hypothetical protein [Enterococcus faecalis T1]
Length = 365
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 127/213 (59%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+EP + WM WP ER DNWRD Q F VA AIS+F P+ V
Sbjct: 9 TPKQDGFRMPGEFEPQEKVWMIWP---ERPDNWRDGGKPVQEAFTNVAKAISQFTPMNVV 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S Q++N R QLP I V EMS N +W RD GP+ V+N ++ G+DW FN
Sbjct: 66 VSQQQFQNCRRQLPPEITVYEMSNNDAWVRDCGPSFVINDHG--------EIRGVDWTFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W D VA+KI E + + VLEGGS HVDG+GT LTTE CLL
Sbjct: 118 AWGGLVDGLYFPWDQDDLVAQKICEIEHVDSYRTDDFVLEGGSFHVDGQGTVLTTEMCLL 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
++ RNP L+K IE +L YL V K++WL G+
Sbjct: 178 SEGRNPQLSKEAIEQKLCDYLNVEKVLWLGDGI 210
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I N G+I PQ+GD+ D A+ + FP ++VG+ E+V
Sbjct: 293 PREDGDICIASYMNFLITNDGVIVPQYGDEN-DRLALEQVQAMFPDKKIVGVNTV-EVVY 350
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQ+P
Sbjct: 351 GGGNIHCITQQEP 363
>gi|229546571|ref|ZP_04435296.1| agmatine deiminase [Enterococcus faecalis TX1322]
gi|229548680|ref|ZP_04437405.1| agmatine deiminase [Enterococcus faecalis ATCC 29200]
gi|256854399|ref|ZP_05559763.1| agmatine deiminase [Enterococcus faecalis T8]
gi|256957397|ref|ZP_05561568.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|256964429|ref|ZP_05568600.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
gi|257077607|ref|ZP_05571968.1| agmatine deiminase [Enterococcus faecalis JH1]
gi|257080999|ref|ZP_05575360.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|257083661|ref|ZP_05578022.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
gi|257415303|ref|ZP_05592297.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
gi|257420993|ref|ZP_05597983.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|294779939|ref|ZP_06745320.1| agmatine deiminase [Enterococcus faecalis PC1.1]
gi|307269788|ref|ZP_07551118.1| agmatine deiminase [Enterococcus faecalis TX4248]
gi|307272548|ref|ZP_07553801.1| agmatine deiminase [Enterococcus faecalis TX0855]
gi|307274677|ref|ZP_07555849.1| agmatine deiminase [Enterococcus faecalis TX2134]
gi|307289573|ref|ZP_07569517.1| agmatine deiminase [Enterococcus faecalis TX0109]
gi|307296375|ref|ZP_07576200.1| agmatine deiminase [Enterococcus faecalis TX0411]
gi|312900330|ref|ZP_07759641.1| agmatine deiminase [Enterococcus faecalis TX0470]
gi|312953119|ref|ZP_07771968.1| agmatine deiminase [Enterococcus faecalis TX0102]
gi|384512435|ref|YP_005707528.1| agmatine deiminase [Enterococcus faecalis OG1RF]
gi|384517797|ref|YP_005705102.1| agmatine deiminase [Enterococcus faecalis 62]
gi|397699131|ref|YP_006536919.1| agmatine deiminase [Enterococcus faecalis D32]
gi|421514140|ref|ZP_15960833.1| Agmatine deiminase [Enterococcus faecalis ATCC 29212]
gi|422686200|ref|ZP_16744406.1| agmatine deiminase [Enterococcus faecalis TX4000]
gi|422691249|ref|ZP_16749286.1| agmatine deiminase [Enterococcus faecalis TX0031]
gi|422695584|ref|ZP_16753563.1| agmatine deiminase [Enterococcus faecalis TX4244]
gi|422705729|ref|ZP_16763522.1| agmatine deiminase [Enterococcus faecalis TX0043]
gi|422709350|ref|ZP_16766806.1| agmatine deiminase [Enterococcus faecalis TX0027]
gi|422727311|ref|ZP_16783753.1| agmatine deiminase [Enterococcus faecalis TX0312]
gi|229306196|gb|EEN72192.1| agmatine deiminase [Enterococcus faecalis ATCC 29200]
gi|229308316|gb|EEN74303.1| agmatine deiminase [Enterococcus faecalis TX1322]
gi|256709959|gb|EEU25003.1| agmatine deiminase [Enterococcus faecalis T8]
gi|256947893|gb|EEU64525.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|256954925|gb|EEU71557.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
gi|256985637|gb|EEU72939.1| agmatine deiminase [Enterococcus faecalis JH1]
gi|256989029|gb|EEU76331.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|256991691|gb|EEU78993.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
gi|257157131|gb|EEU87091.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
gi|257162817|gb|EEU92777.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|294452988|gb|EFG21409.1| agmatine deiminase [Enterococcus faecalis PC1.1]
gi|295114043|emb|CBL32680.1| agmatine deiminase [Enterococcus sp. 7L76]
gi|306496059|gb|EFM65643.1| agmatine deiminase [Enterococcus faecalis TX0411]
gi|306499387|gb|EFM68760.1| agmatine deiminase [Enterococcus faecalis TX0109]
gi|306508606|gb|EFM77704.1| agmatine deiminase [Enterococcus faecalis TX2134]
gi|306510833|gb|EFM79850.1| agmatine deiminase [Enterococcus faecalis TX0855]
gi|306513898|gb|EFM82500.1| agmatine deiminase [Enterococcus faecalis TX4248]
gi|310628953|gb|EFQ12236.1| agmatine deiminase [Enterococcus faecalis TX0102]
gi|311292518|gb|EFQ71074.1| agmatine deiminase [Enterococcus faecalis TX0470]
gi|315029091|gb|EFT41023.1| agmatine deiminase [Enterococcus faecalis TX4000]
gi|315036113|gb|EFT48045.1| agmatine deiminase [Enterococcus faecalis TX0027]
gi|315146949|gb|EFT90965.1| agmatine deiminase [Enterococcus faecalis TX4244]
gi|315153970|gb|EFT97986.1| agmatine deiminase [Enterococcus faecalis TX0031]
gi|315156764|gb|EFU00781.1| agmatine deiminase [Enterococcus faecalis TX0043]
gi|315157720|gb|EFU01737.1| agmatine deiminase [Enterococcus faecalis TX0312]
gi|323479930|gb|ADX79369.1| agmatine deiminase [Enterococcus faecalis 62]
gi|327534324|gb|AEA93158.1| agmatine deiminase [Enterococcus faecalis OG1RF]
gi|397335770|gb|AFO43442.1| agmatine deiminase [Enterococcus faecalis D32]
gi|401672733|gb|EJS79198.1| Agmatine deiminase [Enterococcus faecalis ATCC 29212]
Length = 365
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 127/213 (59%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+EP + WM WP ER DNWRD Q F VA AIS+F P+ V
Sbjct: 9 TPKQDGFRMPGEFEPQEKVWMIWP---ERPDNWRDGGKPVQEAFTNVAKAISQFTPMNVV 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S Q++N R QLP I V EMS N +W RD GP+ V+N ++ G+DW FN
Sbjct: 66 VSQQQFQNCRRQLPPEITVYEMSNNDAWVRDCGPSFVINDHG--------EIRGVDWTFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W D VA+KI E + + VLEGGS HVDG+GT LTTE CLL
Sbjct: 118 AWGGLVDGLYFPWDQDDLVAQKICEIEHVDSYRTDDFVLEGGSFHVDGQGTVLTTEMCLL 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
++ RNP L+K IE +L YL V K++WL G+
Sbjct: 178 SEGRNPQLSKEAIEQKLCDYLNVEKVLWLGDGI 210
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 215 RGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKY 274
+G F + PR G ASY+NF I N G+I PQ+GD+ D A+ + FP
Sbjct: 280 KGSFKIDFVEGTMPREDGDICIASYMNFLITNDGVIVPQYGDEN-DRLALEQVQTMFPDK 338
Query: 275 EVVGIERAREIVLGGGNIHCITQQQP 300
++VG+ E+V GGGNIHCITQQ+P
Sbjct: 339 KIVGVNTV-EVVYGGGNIHCITQQEP 363
>gi|227517700|ref|ZP_03947749.1| agmatine deiminase [Enterococcus faecalis TX0104]
gi|422727945|ref|ZP_16784366.1| agmatine deiminase [Enterococcus faecalis TX0012]
gi|424677160|ref|ZP_18114020.1| agmatine deiminase [Enterococcus faecalis ERV103]
gi|424681248|ref|ZP_18118039.1| agmatine deiminase [Enterococcus faecalis ERV116]
gi|424682551|ref|ZP_18119316.1| agmatine deiminase [Enterococcus faecalis ERV129]
gi|424688014|ref|ZP_18124631.1| agmatine deiminase [Enterococcus faecalis ERV25]
gi|424689986|ref|ZP_18126523.1| agmatine deiminase [Enterococcus faecalis ERV31]
gi|424694799|ref|ZP_18131187.1| agmatine deiminase [Enterococcus faecalis ERV37]
gi|424695907|ref|ZP_18132278.1| agmatine deiminase [Enterococcus faecalis ERV41]
gi|424702278|ref|ZP_18138440.1| agmatine deiminase [Enterococcus faecalis ERV62]
gi|424702503|ref|ZP_18138651.1| agmatine deiminase [Enterococcus faecalis ERV63]
gi|424706663|ref|ZP_18142665.1| agmatine deiminase [Enterococcus faecalis ERV65]
gi|424716689|ref|ZP_18145991.1| agmatine deiminase [Enterococcus faecalis ERV68]
gi|424720863|ref|ZP_18149962.1| agmatine deiminase [Enterococcus faecalis ERV72]
gi|424725556|ref|ZP_18154246.1| agmatine deiminase [Enterococcus faecalis ERV73]
gi|424726752|ref|ZP_18155402.1| agmatine deiminase [Enterococcus faecalis ERV81]
gi|424742309|ref|ZP_18170632.1| agmatine deiminase [Enterococcus faecalis ERV85]
gi|424752477|ref|ZP_18180476.1| agmatine deiminase [Enterococcus faecalis ERV93]
gi|424760388|ref|ZP_18188016.1| agmatine deiminase [Enterococcus faecalis R508]
gi|227074855|gb|EEI12818.1| agmatine deiminase [Enterococcus faecalis TX0104]
gi|315151564|gb|EFT95580.1| agmatine deiminase [Enterococcus faecalis TX0012]
gi|402351842|gb|EJU86714.1| agmatine deiminase [Enterococcus faecalis ERV116]
gi|402355517|gb|EJU90290.1| agmatine deiminase [Enterococcus faecalis ERV103]
gi|402362212|gb|EJU96749.1| agmatine deiminase [Enterococcus faecalis ERV25]
gi|402365489|gb|EJU99909.1| agmatine deiminase [Enterococcus faecalis ERV31]
gi|402366767|gb|EJV01126.1| agmatine deiminase [Enterococcus faecalis ERV129]
gi|402369686|gb|EJV03957.1| agmatine deiminase [Enterococcus faecalis ERV37]
gi|402369842|gb|EJV04100.1| agmatine deiminase [Enterococcus faecalis ERV62]
gi|402378900|gb|EJV12724.1| agmatine deiminase [Enterococcus faecalis ERV41]
gi|402386885|gb|EJV20379.1| agmatine deiminase [Enterococcus faecalis ERV63]
gi|402387164|gb|EJV20653.1| agmatine deiminase [Enterococcus faecalis ERV68]
gi|402387331|gb|EJV20812.1| agmatine deiminase [Enterococcus faecalis ERV65]
gi|402391458|gb|EJV24762.1| agmatine deiminase [Enterococcus faecalis ERV73]
gi|402392729|gb|EJV25973.1| agmatine deiminase [Enterococcus faecalis ERV72]
gi|402398632|gb|EJV31565.1| agmatine deiminase [Enterococcus faecalis ERV81]
gi|402400612|gb|EJV33429.1| agmatine deiminase [Enterococcus faecalis ERV85]
gi|402403639|gb|EJV36300.1| agmatine deiminase [Enterococcus faecalis R508]
gi|402404667|gb|EJV37284.1| agmatine deiminase [Enterococcus faecalis ERV93]
Length = 365
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 127/213 (59%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+EP + WM WP ER DNWRD Q F VA AIS+F P+ V
Sbjct: 9 TPKQDGFRMPGEFEPQEKVWMIWP---ERPDNWRDGGKPVQEAFTNVAKAISQFTPMNVV 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S Q++N R QLP I V EMS N +W RD GP+ V+N ++ G+DW FN
Sbjct: 66 VSQQQFQNCRRQLPPEITVYEMSNNDAWVRDCGPSFVINDHG--------EIRGVDWTFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W D VA+KI E + + VLEGGS HVDG+GT LTTE CLL
Sbjct: 118 AWGGLVDGLYFPWDQDDLVAQKICEIEHVDSYRTDDFVLEGGSFHVDGQGTVLTTEMCLL 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
++ RNP L+K IE +L YL V K++WL G+
Sbjct: 178 SEGRNPQLSKEAIEQKLCDYLNVEKVLWLGDGI 210
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I N G+I PQ+GD+ D A+ + FP ++VG+ E+V
Sbjct: 293 PREDGDICIASYMNFLITNDGVIVPQYGDEN-DRLALEQVQTMFPDKKIVGVNTV-EVVY 350
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQ+P
Sbjct: 351 GGGNIHCITQQEP 363
>gi|422699320|ref|ZP_16757191.1| agmatine deiminase [Enterococcus faecalis TX1346]
gi|315172180|gb|EFU16197.1| agmatine deiminase [Enterococcus faecalis TX1346]
Length = 365
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 127/213 (59%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+EP + WM WP ER DNWRD Q F VA AIS+F P+ V
Sbjct: 9 TPKQDGFRMPGEFEPQEKVWMIWP---ERPDNWRDGGKPVQEAFTNVAKAISQFTPMNVV 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S Q++N R QLP I V EMS N +W RD GP+ V+N ++ G+DW FN
Sbjct: 66 VSQQQFQNCRRQLPPEITVYEMSNNDAWVRDCGPSFVINDHG--------EIRGVDWTFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W D VA+KI E + + VLEGGS HVDG+GT LTTE CLL
Sbjct: 118 AWGGLVDGLYFPWDQDDLVAQKICEIEHVDSYRTDDFVLEGGSFHVDGQGTVLTTEMCLL 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
++ RNP L+K IE +L YL V K++WL G+
Sbjct: 178 SEGRNPQLSKEAIEQKLCDYLNVEKVLWLGDGI 210
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 215 RGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKY 274
+G F + PR G ASY+NF I N G+I PQ+GD+ D A+ + FP
Sbjct: 280 KGSFKIDFVEGTMPREDGDICIASYMNFLITNDGVIVPQYGDEN-DRLALEQVQTMFPDK 338
Query: 275 EVVGIERAREIVLGGGNIHCITQQQP 300
++VG+ E+V GGGNIHCITQQ+P
Sbjct: 339 KIVGVNTV-EVVYGGGNIHCITQQEP 363
>gi|227554850|ref|ZP_03984897.1| agmatine deiminase [Enterococcus faecalis HH22]
gi|229220683|ref|NP_814483.2| agmatine deiminase [Enterococcus faecalis V583]
gi|256617620|ref|ZP_05474466.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|257089160|ref|ZP_05583521.1| conserved hypothetical protein [Enterococcus faecalis CH188]
gi|257418344|ref|ZP_05595338.1| conserved hypothetical protein [Enterococcus faecalis T11]
gi|312904247|ref|ZP_07763409.1| agmatine deiminase [Enterococcus faecalis TX0635]
gi|422689046|ref|ZP_16747163.1| agmatine deiminase [Enterococcus faecalis TX0630]
gi|422713674|ref|ZP_16770423.1| agmatine deiminase [Enterococcus faecalis TX0309A]
gi|422716415|ref|ZP_16773122.1| agmatine deiminase [Enterococcus faecalis TX0309B]
gi|422721319|ref|ZP_16777911.1| agmatine deiminase [Enterococcus faecalis TX0017]
gi|422736305|ref|ZP_16792569.1| agmatine deiminase [Enterococcus faecalis TX1341]
gi|73622160|sp|Q837U5.2|AGUA_ENTFA RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|227176019|gb|EEI56991.1| agmatine deiminase [Enterococcus faecalis HH22]
gi|256597147|gb|EEU16323.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256997972|gb|EEU84492.1| conserved hypothetical protein [Enterococcus faecalis CH188]
gi|257160172|gb|EEU90132.1| conserved hypothetical protein [Enterococcus faecalis T11]
gi|310632343|gb|EFQ15626.1| agmatine deiminase [Enterococcus faecalis TX0635]
gi|315031439|gb|EFT43371.1| agmatine deiminase [Enterococcus faecalis TX0017]
gi|315166915|gb|EFU10932.1| agmatine deiminase [Enterococcus faecalis TX1341]
gi|315575362|gb|EFU87553.1| agmatine deiminase [Enterococcus faecalis TX0309B]
gi|315577977|gb|EFU90168.1| agmatine deiminase [Enterococcus faecalis TX0630]
gi|315581392|gb|EFU93583.1| agmatine deiminase [Enterococcus faecalis TX0309A]
Length = 365
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 127/213 (59%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+EP + WM WP ER DNWRD Q F VA AIS+F P+ V
Sbjct: 9 TPKQDGFRMPGEFEPQEKVWMIWP---ERPDNWRDGGKPVQEAFTNVAKAISQFTPMNVV 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S Q++N R QLP I V EMS N +W RD GP+ V+N ++ G+DW FN
Sbjct: 66 VSQQQFQNCRRQLPPEITVYEMSNNDAWVRDCGPSFVINDHG--------EIRGVDWTFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W D VA+KI E + + VLEGGS HVDG+GT LTTE CLL
Sbjct: 118 AWGGLVDGLYFPWDQDDLVAQKICEIEHVDSYRTDDFVLEGGSFHVDGQGTVLTTEMCLL 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
++ RNP L+K IE +L YL V K++WL G+
Sbjct: 178 SEGRNPQLSKEAIEQKLCDYLNVEKVLWLGDGI 210
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 215 RGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKY 274
+G F + PR G ASY+NF I N G+I PQ+GD+ D A+ + FP
Sbjct: 280 KGSFKIDFVEGTMPREDGDICIASYMNFLITNDGVIVPQYGDEN-DHLALEQVQTMFPDK 338
Query: 275 EVVGIERAREIVLGGGNIHCITQQQP 300
++VG+ E+V GGGNIHCITQQ+P
Sbjct: 339 KIVGVNTV-EVVYGGGNIHCITQQEP 363
>gi|300862164|ref|ZP_07108244.1| agmatine deiminase [Enterococcus faecalis TUSoD Ef11]
gi|422732015|ref|ZP_16788361.1| agmatine deiminase [Enterococcus faecalis TX0645]
gi|422738863|ref|ZP_16794049.1| agmatine deiminase [Enterococcus faecalis TX2141]
gi|428766261|ref|YP_007152372.1| agmatine deiminase [Enterococcus faecalis str. Symbioflor 1]
gi|300848689|gb|EFK76446.1| agmatine deiminase [Enterococcus faecalis TUSoD Ef11]
gi|315145237|gb|EFT89253.1| agmatine deiminase [Enterococcus faecalis TX2141]
gi|315161936|gb|EFU05953.1| agmatine deiminase [Enterococcus faecalis TX0645]
gi|427184434|emb|CCO71658.1| agmatine deiminase [Enterococcus faecalis str. Symbioflor 1]
Length = 365
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 127/213 (59%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+EP + WM WP ER DNWRD Q F VA AIS+F P+ V
Sbjct: 9 TPKQDGFRMPGEFEPQEKVWMIWP---ERPDNWRDGGKPVQEAFTNVAKAISQFTPMNVV 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S Q++N R QLP I V EMS N +W RD GP+ V+N ++ G+DW FN
Sbjct: 66 VSQQQFQNCRRQLPPEITVYEMSNNDAWVRDCGPSFVINDHG--------EIRGVDWTFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W D VA+KI E + + VLEGGS HVDG+GT LTTE CLL
Sbjct: 118 AWGGLVDGLYFPWDQDDLVAQKICEIEHVDSYRTDDFVLEGGSFHVDGQGTVLTTEMCLL 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
++ RNP L+K IE +L YL V K++WL G+
Sbjct: 178 SEGRNPQLSKEAIEQKLCDYLNVEKVLWLGDGI 210
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 215 RGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKY 274
+G F + PR G ASY+NF I N G+I PQ+GD+ D A+ + FP
Sbjct: 280 KGSFKIDFVEGTMPREEGDICIASYMNFLITNDGVIVPQYGDEN-DCLALEQVQTMFPDK 338
Query: 275 EVVGIERAREIVLGGGNIHCITQQQP 300
++VG+ E+V GGGNIHCITQQ+P
Sbjct: 339 KIVGVNTV-EVVYGGGNIHCITQQEP 363
>gi|397163283|ref|ZP_10486748.1| agmatine deiminase [Enterobacter radicincitans DSM 16656]
gi|396095430|gb|EJI92975.1| agmatine deiminase [Enterobacter radicincitans DSM 16656]
Length = 360
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/219 (48%), Positives = 138/219 (63%), Gaps = 11/219 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEW PH WM WP R DNWR +A AQ+ FA VA AIS+ PV +
Sbjct: 6 TPVKDGFAMPAEWAPHQAVWMIWPYR---TDNWRANAAPAQQAFAAVAKAISRNTPVIMG 62
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
+ ARS +P + +IEM + +W RDTGPT+V+N QA + GI W FN
Sbjct: 63 VPVVEMAKARSTMPAEVTLIEMESDDAWMRDTGPTVVLN--------QAGEQRGISWTFN 114
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WGG++ G Y W D VA + + ++P + +VLEGGSIHVDGEGT LTT ECLLN
Sbjct: 115 AWGGLNGGLYASWDRDQLVAGHVANYHQMPCYNTDLVLEGGSIHVDGEGTLLTTAECLLN 174
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
NRNP+L++ +IE +L+ YLGV +IIWLP G+F DG
Sbjct: 175 PNRNPNLSQAEIEQQLRDYLGVSQIIWLPEGVFNDETDG 213
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ G A R G RLA SYVN+ ++N II PQ DG A + + FP + + G+
Sbjct: 282 VEKGTAIERHEGNRLAGSYVNYLVSNQQIIYPQLHPAT-DGAAQALFEEMFPDFVITGVP 340
Query: 281 RAREIVLGGGNIHCITQQQP 300
AREI+LGGGNIHCITQQ P
Sbjct: 341 -AREILLGGGNIHCITQQIP 359
>gi|256761503|ref|ZP_05502083.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|256682754|gb|EEU22449.1| conserved hypothetical protein [Enterococcus faecalis T3]
Length = 365
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 127/213 (59%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+EP + WM WP ER DNWRD Q F VA AIS+F P+ V
Sbjct: 9 TPKQDGFRMPGEFEPQEKVWMIWP---ERPDNWRDGGKPVQEAFTNVAKAISQFTPMNVV 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S Q++N R QLP I V EMS N +W RD GP+ V+N ++ G+DW FN
Sbjct: 66 VSQQQFQNCRRQLPPEITVYEMSNNDAWVRDCGPSFVINDHG--------EIRGVDWTFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W D VA+KI E + + VLEGGS HVDG+GT LTTE CLL
Sbjct: 118 AWGGLVDGLYFPWDQDDLVAQKICEIEHVDSYRTDDFVLEGGSFHVDGQGTVLTTEMCLL 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
++ RNP L+K IE +L YL V K++WL G+
Sbjct: 178 SEGRNPQLSKEAIEQKLCDYLNVEKVLWLGDGI 210
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I N G+I PQ+GD+ D A+ + FP ++VG+ E+V
Sbjct: 293 PREDGDICIASYMNFLITNDGVIVPQYGDEN-DCLALEQVQTMFPDKKIVGVNTV-EVVY 350
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQ+P
Sbjct: 351 GGGNIHCITQQEP 363
>gi|255973817|ref|ZP_05424403.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|307284504|ref|ZP_07564666.1| agmatine deiminase [Enterococcus faecalis TX0860]
gi|255966689|gb|EET97311.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|306503181|gb|EFM72435.1| agmatine deiminase [Enterococcus faecalis TX0860]
Length = 365
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 127/213 (59%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+EP + WM WP ER DNWRD Q F VA AIS+F P+ V
Sbjct: 9 TPKQDGFRMPGEFEPQEKVWMIWP---ERPDNWRDGGKPVQEAFTNVAKAISQFTPMNVV 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S Q++N R QLP I V EMS N +W RD GP+ V+N ++ G+DW FN
Sbjct: 66 VSQQQFQNCRRQLPPEITVYEMSNNDAWVRDCGPSFVINDHG--------EIRGVDWTFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W D VA+KI E + + VLEGGS HVDG+GT LTTE CLL
Sbjct: 118 AWGGLVDGLYFPWDQDDLVAQKICEIEHVDSYRTDDFVLEGGSFHVDGQGTVLTTEMCLL 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
++ RNP L+K IE +L YL V K++WL G+
Sbjct: 178 SEGRNPQLSKEAIEQKLCDYLNVEKVLWLGDGI 210
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I N G+I PQ+GD+ D A+ + FP ++VG+ E+V
Sbjct: 293 PREDGDICIASYMNFLITNDGVIVPQYGDEN-DCLALEQVQTMFPDKKIVGVNTV-EVVY 350
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQ+P
Sbjct: 351 GGGNIHCITQQEP 363
>gi|229576794|ref|YP_001007597.2| agmatine deiminase [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|420259858|ref|ZP_14762551.1| agmatine deiminase [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|404512599|gb|EKA26441.1| agmatine deiminase [Yersinia enterocolitica subsp. enterocolitica
WA-314]
Length = 374
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 131/222 (59%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ GTP G+ MPAEW WM WP R DNWR + AQ+ FAKVA AIS+ PV
Sbjct: 16 LPGTPQQDGFFMPAEWAKQDAVWMLWPYRQ---DNWRGKGIPAQQTFAKVAEAISRTTPV 72
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A++ LP ++ ++EM+ + +W RDTGPT+V+N + +DW
Sbjct: 73 FMGVPAEFMAQAKATLPASVTLVEMASDDAWMRDTGPTMVINGAGERRA--------VDW 124
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG++ G Y +W D ++A ++ + +VLEGGSIH DGEGT LTT EC
Sbjct: 125 QFNAWGGLNGGLYANWQQDEKIAVQVSDFLNNAHYSAPLVLEGGSIHTDGEGTLLTTAEC 184
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNPHL + QIE L+ YLGV IWL G++ DG
Sbjct: 185 LLNPNRNPHLNQVQIEQLLREYLGVTHFIWLQDGVYNDETDG 226
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 225 EAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERARE 284
+A PR AG RLA SYVNF I+N II P D DG A +L Q FP Y +VG+ ARE
Sbjct: 299 DAVPRTAGERLAGSYVNFLISNQQIIYPLL-DSSTDGLAHDLLQQIFPGYAIVGVP-ARE 356
Query: 285 IVLGGGNIHCITQQQPA 301
I+LGGGNIHCITQQ PA
Sbjct: 357 ILLGGGNIHCITQQIPA 373
>gi|152995518|ref|YP_001340353.1| agmatine deiminase [Marinomonas sp. MWYL1]
gi|189027499|sp|A6VVD9.1|AGUA_MARMS RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|150836442|gb|ABR70418.1| Agmatine deiminase [Marinomonas sp. MWYL1]
Length = 369
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/267 (43%), Positives = 146/267 (54%), Gaps = 19/267 (7%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
+P L G+ MPAE EP Q WM WP R DNWR+ HAQ F VATAI++ VT
Sbjct: 8 SPRLDGFRMPAEHEPQEQVWMAWPTRE---DNWREKGKHAQAEFVAVATAIAQSTKVTFI 64
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A +E AR LP+ IRVIE+ + W RD G T VVN Q + A W FN
Sbjct: 65 VDAKHYEQARLALPDQIRVIEIPSDDCWMRDIGATYVVND-------QGERRAN-SWQFN 116
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WGG DG Y W D VA K+ + + ++LEGGSIHVDGEGT TTEECLL+
Sbjct: 117 AWGGELDGLYDSWEQDNAVAEKMAAVTGDYVYHAPLILEGGSIHVDGEGTLYTTEECLLH 176
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRL-AASYVNFYI 244
+RNPHL+K IE+ LK YL V KIIWL GL+ +G + R + +
Sbjct: 177 PSRNPHLSKEDIEDLLKVYLNVEKIIWLKDGLYNDETNGHVDNIMHVIRPGVVALTDCED 236
Query: 245 ANGGIITPQFGDKKWDGEAVRVLSQAF 271
+N PQ+ K A++VLSQA
Sbjct: 237 SND----PQYAISK---AAIKVLSQAI 256
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 63/101 (62%), Gaps = 10/101 (9%)
Query: 208 MKIIWLPRGLFGMIHDGEAKP--------RLAGTRLAASYVNFYIANGGIITPQFGDKKW 259
++II LP + + EAK R G RLAASY NF I N I+ P FG+K
Sbjct: 263 LEIIKLPMPGPLFVSEDEAKNLLKSDSMNRQVGERLAASYANFLITNNSIVFPTFGEKT- 321
Query: 260 DGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
D +A +L +AFP+++V+G+ AR I+LGGGNIHCITQQ P
Sbjct: 322 DEQAKEILQKAFPEHKVIGV-YARNILLGGGNIHCITQQVP 361
>gi|90019126|gb|ABD84216.1| peptidylarginine deiminase-like [Yersinia sp. MH-1]
Length = 236
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/222 (45%), Positives = 130/222 (58%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MPAEW P WM WP R DNWR + AQ+ FAKVA AI++ PV
Sbjct: 2 LQTTPRQDGFYMPAEWAPQDAVWMLWPYRQ---DNWRGKGIPAQQTFAKVAEAIARATPV 58
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A E A++ +P NI ++EM + +W RDTGPT+V+N G +DW
Sbjct: 59 YMGVPAKFMEQAKATMPANITLVEMECDDAWMRDTGPTMVINGKGERRG--------VDW 110
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG+ G Y DW D +VA ++ + + ++LEGGSIH DGEGT LTT EC
Sbjct: 111 KFNAWGGLLGGLYADWRQDEKVAEQVNQFHKNLSYAAPLILEGGSIHTDGEGTLLTTAEC 170
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNP L + QIE L+ YLGV IWL G++ DG
Sbjct: 171 LLNPNRNPDLNQEQIEALLREYLGVTHFIWLQDGVYNDETDG 212
>gi|295106085|emb|CBL03628.1| agmatine deiminase [Gordonibacter pamelaeae 7-10-1-b]
Length = 371
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 131/219 (59%), Gaps = 14/219 (6%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
E TP GY MP E+EP + WM WP R DNWRD A AQ+ FA+VA AI++FEP
Sbjct: 6 EEQSTPRQDGYRMPGEFEPQERIWMLWP---HRPDNWRDGAKPAQKAFAEVARAIARFEP 62
Query: 62 VTVCASAAQWENARSQLPE--NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
V + A +E AR ++ E N+ VIEM+ + SW RD GPT V N V
Sbjct: 63 VVIGAKPEDYEAARFEMSEDENVMVIEMTSDDSWIRDCGPTFVKNDDG--------DVRA 114
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLT 178
+ W+FN+WGG+ DG Y W D V K+ R R+ P + VLEGGSIHVDGEGT +T
Sbjct: 115 VHWHFNAWGGLYDGLYFPWDQDALVGVKVADLARAVRYRPDTFVLEGGSIHVDGEGTVIT 174
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
TE CLL+ RNP L+K IE L+ YL V K+IW+ G+
Sbjct: 175 TEMCLLSPGRNPELSKEDIEGYLREYLNVEKVIWIKDGI 213
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR ASY+NF I N II PQ+GD+ +D A + FP E+VG+ REI
Sbjct: 298 PRTTDDYAIASYMNFLIVNDAIIFPQYGDE-YDDLACEQVQAMFPDREIVGVP-TREIAY 355
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQ+PA
Sbjct: 356 GGGNIHCITQQEPA 369
>gi|386314602|ref|YP_006010767.1| agmatine deiminase [Shewanella putrefaciens 200]
gi|319427227|gb|ADV55301.1| agmatine deiminase [Shewanella putrefaciens 200]
Length = 370
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/222 (45%), Positives = 131/222 (59%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ P+ G+ MPAEW WM WP R DNWR +AQ FAKVA AI PV
Sbjct: 11 LTTKPSQDGFYMPAEWAAQQAVWMIWPYR---PDNWRAAGAYAQATFAKVADAIGAATPV 67
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A++ +P ++ ++EM N W RDTGPT+VVN + G+DW
Sbjct: 68 YMGVPKAFLAEAKAVMPSHVTLVEMDSNDCWARDTGPTVVVNAHG--------ECRGVDW 119
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG + G Y W D QVA+++L+ R+ ++LEGGSIHVDGEGTC+T+ EC
Sbjct: 120 GFNAWGGHNGGLYFPWDKDEQVAQQMLAQHGFARYSAPLILEGGSIHVDGEGTCMTSAEC 179
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNP LTK QIE+ L+ YL V + IWL G++ DG
Sbjct: 180 LLNANRNPELTKEQIEDLLRDYLNVKQFIWLQDGVYMDETDG 221
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ +G PR AG RLA SYVNF I N I+ P D D A + L + FP++E+VG+
Sbjct: 290 VTEGTGVPRTAGERLAGSYVNFLITNHRIVFPLL-DPATDDIAAQKLQEIFPEHEIVGVP 348
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ PA
Sbjct: 349 -AREILLGGGNIHCITQQIPA 368
>gi|377810378|ref|YP_005005599.1| agmatine deiminase [Pediococcus claussenii ATCC BAA-344]
gi|361057119|gb|AEV95923.1| agmatine deiminase [Pediococcus claussenii ATCC BAA-344]
Length = 364
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 134/217 (61%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MP E+E H ++ WP +R DNWR+ AQ+ F +VA AIS+FE V
Sbjct: 4 LESTPKKDGFRMPGEFETHKGVYILWP---QRPDNWRNGGKPAQKTFVEVAKAISEFEHV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV + Q+ NAR+ LP + V+E+S + SW RD G T V N + +DW
Sbjct: 61 TVGVNDDQYTNARNMLPAEVEVVEISNDDSWIRDCGATFVTNDDGT--------LRAVDW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG+ DG Y W D +VA+K+ ER R+ +LEGGSIHVDGEGT +TTEE
Sbjct: 113 TFNAWGGLVDGLYFPWDKDDRVAQKMSEMERTDRYRLDDFILEGGSIHVDGEGTLITTEE 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL++ RN L+K QIE LK +L + KIIWL RG++
Sbjct: 173 CLLSEGRNSQLSKEQIEEVLKEHLNLEKIIWLKRGIY 209
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
++PR G RLAASYVN+Y ANGGI+ P+F D D +A L + +P ++VG+ AREI
Sbjct: 290 SQPRTEGERLAASYVNYYTANGGIVFPKFND-PMDVKAEETLQRLYPDRKIVGVS-AREI 347
Query: 286 VLGGGNIHCITQQQP 300
+LGGGNIHCITQQ P
Sbjct: 348 LLGGGNIHCITQQVP 362
>gi|218132621|ref|ZP_03461425.1| hypothetical protein BACPEC_00480 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992347|gb|EEC58350.1| agmatine deiminase [[Bacteroides] pectinophilus ATCC 43243]
Length = 380
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 132/217 (60%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ P G+ MPAE++ H C M WP ER D+W A++VF K+A+AI++ E V
Sbjct: 4 LESRPVNDGFYMPAEYDRHYGCIMIWP---ERTDSWSFGGYEARKVFVKIASAIAESEKV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
VCA +Q+ENAR LP+NIRVIEMS N +W RD PT VV+ A + GI W
Sbjct: 61 IVCAGYSQYENARLALPDNIRVIEMSNNDAWARDCAPTFVVD--------DARTLRGISW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG+ DG Y W D +A K+ + VLEGGSIHVDGEGT + T
Sbjct: 113 CFNAWGGLVDGLYFPWDKDNAMAYKLCDMLDADAYNAGDFVLEGGSIHVDGEGTAMVTAS 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+K RNP LT+ +IE LK YL V K++WLP G+F
Sbjct: 173 CLLSKGRNPSLTRSEIEQRLKDYLNVSKVLWLPCGVF 209
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Query: 214 PRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFG--------DKKWDGEAVR 265
P G+ G R AG RLAASYVNFYI+N II P FG + +D +A
Sbjct: 278 PEECEGLDSCGFEPVRTAGERLAASYVNFYISNNAIIMPGFGKPDNPDDVNHIYDAKAKE 337
Query: 266 VLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
+L FP V+ I REI+ GGGNIHC+TQQ P
Sbjct: 338 ILESLFPSRRVIQI-YTREILTGGGNIHCLTQQIP 371
>gi|145300484|ref|YP_001143325.1| agmatine deiminase [Aeromonas salmonicida subsp. salmonicida A449]
gi|142853256|gb|ABO91577.1| Porphyromonas-type peptidyl-arginine deiminase [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 349
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 101/211 (47%), Positives = 129/211 (61%), Gaps = 11/211 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAEW WM WP R DNWR+ AQ FAKVA AI + PV + A E
Sbjct: 1 MPAEWAHQQAVWMIWPFR---PDNWREAGRFAQATFAKVADAIGQATPVFMGVPAQFMEQ 57
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
AR+ +P ++ ++EM+ + W RDTGPT+V N A + G+DW FN+WGG G
Sbjct: 58 ARAIMPAHVTLVEMASDDCWARDTGPTVVTNA--------AGECRGVDWGFNAWGGHKGG 109
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
Y W D +VA ++L+ + R+ ++LEGGSIHVDGEGTC+TT ECLLN+NRNPHLT
Sbjct: 110 LYYPWDQDEKVAAQMLAQHGMDRYDAPLILEGGSIHVDGEGTCMTTAECLLNENRNPHLT 169
Query: 194 KGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
K QIE L+ YLGV IWL G++ DG
Sbjct: 170 KDQIEAYLRDYLGVKSFIWLNEGVYMDETDG 200
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ G PR A RLA SYVNF I N I+ P D DGEA R+L + FP+++VVG+
Sbjct: 269 VESGTGVPREAQGRLAGSYVNFLITNDRIVYPLL-DAAIDGEAQRILEEIFPEHKVVGVP 327
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ P+
Sbjct: 328 -AREILLGGGNIHCITQQIPS 347
>gi|242241204|ref|YP_002989385.1| agmatine deiminase [Dickeya dadantii Ech703]
gi|242133261|gb|ACS87563.1| agmatine deiminase [Dickeya dadantii Ech703]
Length = 365
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 105/221 (47%), Positives = 135/221 (61%), Gaps = 13/221 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRD--DALHAQRVFAKVATAISKFEPVT 63
TP G+ MPAEW PH WM WP R DNWR D + AQR+FA VA AI++ PV
Sbjct: 6 TPLQDGFAMPAEWAPHEAVWMLWPYRR---DNWRSQGDVIPAQRIFAAVAAAIAQTTPVI 62
Query: 64 VCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWN 123
+ Q A+S +P + ++EM + +W RDTGPT+V+N +A + G+DW
Sbjct: 63 MGVPRDQMTLAKSVMPAGVTLVEMESDDAWMRDTGPTVVLN--------EAGERRGVDWR 114
Query: 124 FNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECL 183
FN+WGG G Y+DW D QVA ++L+ R+ ++LEGGSIH DGEGT LTT ECL
Sbjct: 115 FNAWGGALGGLYQDWRRDEQVAAQVLAYHGDARYAAPLILEGGSIHTDGEGTLLTTAECL 174
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LN NRNPHL + QIE L+ YLGV IWL G++ DG
Sbjct: 175 LNPNRNPHLNQAQIEQLLRDYLGVSSFIWLEEGVYNDETDG 215
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ +G A R AG+RLA SYVNF I+N II P D + D +A +L Q FP Y + G+
Sbjct: 284 VDEGNAIERNAGSRLAGSYVNFLISNRQIIYPLL-DTRTDADAHALLQQMFPDYLITGVP 342
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ P+
Sbjct: 343 -AREILLGGGNIHCITQQIPS 362
>gi|373950475|ref|ZP_09610436.1| Agmatine deiminase [Shewanella baltica OS183]
gi|386323688|ref|YP_006019805.1| Agmatine deiminase [Shewanella baltica BA175]
gi|333817833|gb|AEG10499.1| Agmatine deiminase [Shewanella baltica BA175]
gi|373887075|gb|EHQ15967.1| Agmatine deiminase [Shewanella baltica OS183]
Length = 370
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/222 (45%), Positives = 130/222 (58%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ P+ G+ MPAEW WM WP R DNWR +AQ FAKVA AI PV
Sbjct: 11 LTTKPSQDGFYMPAEWAAQQAVWMIWPYR---PDNWRSAGAYAQATFAKVADAIGGATPV 67
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+ +P ++ ++EM N W RDTGPT+VVN + + G+DW
Sbjct: 68 YMGVPKAFLAEAQKVMPSHVTLVEMDSNDCWARDTGPTVVVNDNG--------ECRGVDW 119
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG + G Y W D QVA+++L R+ ++LEGGSIHVDGEGTC+T+ EC
Sbjct: 120 GFNAWGGHNGGLYFPWDKDEQVAQQMLKQHGFARYSAPLILEGGSIHVDGEGTCMTSAEC 179
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNP LTK QIE+ L+ YL V + IWL G++ DG
Sbjct: 180 LLNANRNPELTKEQIEDLLRDYLNVKQFIWLQDGVYMDETDG 221
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ +G PR AG RLA SYVNF I N I+ P D D A + L + FP++E+VG+
Sbjct: 290 VTEGTGVPRTAGERLAGSYVNFLITNNRIVFPLL-DPATDDIAAQKLQEIFPEHEIVGVP 348
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ P+
Sbjct: 349 -AREILLGGGNIHCITQQIPS 368
>gi|422700747|ref|ZP_16758590.1| agmatine deiminase [Enterococcus faecalis TX1342]
gi|315170699|gb|EFU14716.1| agmatine deiminase [Enterococcus faecalis TX1342]
Length = 365
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 127/213 (59%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+EP + WM WP ER DNWRD Q F VA AIS+F P+ V
Sbjct: 9 TPKQDGFRMPGEFEPQEKVWMIWP---ERPDNWRDGGKPVQEAFTNVAKAISQFTPMNVV 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S Q++N R Q+P I V EMS N +W RD GP+ V+N ++ G+DW FN
Sbjct: 66 VSQQQFQNCRRQMPPEITVYEMSNNDAWVRDCGPSFVINDHG--------EIRGVDWTFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W D VA+KI E + + VLEGGS HVDG+GT LTTE CLL
Sbjct: 118 AWGGLVDGLYFPWDQDDLVAQKICEIEHVDSYRTDDFVLEGGSFHVDGQGTVLTTEMCLL 177
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
++ RNP L+K IE +L YL V K++WL G+
Sbjct: 178 SEGRNPQLSKEAIEQKLCDYLNVEKVLWLGDGI 210
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I N G+I PQ+GD+ D A+ + FP ++VG+ E+V
Sbjct: 293 PREDGDICIASYMNFLITNDGVIVPQYGDEN-DCLALEQVQTMFPDKKIVGVNTV-EVVY 350
Query: 288 GGGNIHCITQQQP 300
GGGNIHCITQQ+P
Sbjct: 351 GGGNIHCITQQEP 363
>gi|256959868|ref|ZP_05564039.1| agmatine deiminase [Enterococcus faecalis Merz96]
gi|293385058|ref|ZP_06630892.1| agmatine deiminase [Enterococcus faecalis R712]
gi|293389329|ref|ZP_06633790.1| agmatine deiminase [Enterococcus faecalis S613]
gi|312906047|ref|ZP_07765060.1| agmatine deiminase [Enterococcus faecalis DAPTO 512]
gi|312909393|ref|ZP_07768249.1| agmatine deiminase [Enterococcus faecalis DAPTO 516]
gi|256950364|gb|EEU66996.1| agmatine deiminase [Enterococcus faecalis Merz96]
gi|291077736|gb|EFE15100.1| agmatine deiminase [Enterococcus faecalis R712]
gi|291081351|gb|EFE18314.1| agmatine deiminase [Enterococcus faecalis S613]
gi|310628042|gb|EFQ11325.1| agmatine deiminase [Enterococcus faecalis DAPTO 512]
gi|311290417|gb|EFQ68973.1| agmatine deiminase [Enterococcus faecalis DAPTO 516]
Length = 305
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 128/216 (59%), Gaps = 12/216 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MP E+EP + WM WP ER DNWRD Q F VA AIS+F P+
Sbjct: 6 VGSTPKQDGFRMPGEFEPQEKVWMIWP---ERPDNWRDGGKPVQEAFTNVAKAISQFTPM 62
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
V S Q++N R QLP I V EMS N +W RD GP+ V+N ++ G+DW
Sbjct: 63 NVVVSQQQFQNCRRQLPPEITVYEMSNNDAWVRDCGPSFVINDHG--------EIRGVDW 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG+ DG Y W D VA+KI E + + VLEGGS HVDG+GT LTTE
Sbjct: 115 TFNAWGGLVDGLYFPWDQDDLVAQKICEIEHVDSYRTDDFVLEGGSFHVDGQGTVLTTEM 174
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
CLL++ RNP L+K IE +L YL V K++WL G+
Sbjct: 175 CLLSEGRNPQLSKEAIEQKLCDYLNVEKVLWLGDGI 210
>gi|126175331|ref|YP_001051480.1| agmatine deiminase [Shewanella baltica OS155]
gi|386342084|ref|YP_006038450.1| agmatine deiminase [Shewanella baltica OS117]
gi|166919515|sp|A3D798.1|AGUA_SHEB5 RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|125998536|gb|ABN62611.1| Porphyromonas-type peptidyl-arginine deiminase [Shewanella baltica
OS155]
gi|334864485|gb|AEH14956.1| agmatine deiminase [Shewanella baltica OS117]
Length = 370
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 129/218 (59%), Gaps = 11/218 (5%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
P+ G+ MPAEW WM WP R DNWR +AQ FAKVA AI PV +
Sbjct: 15 PSQDGFYMPAEWAAQQAVWMIWPYR---PDNWRSAGAYAQATFAKVADAIGGATPVYMGV 71
Query: 67 SAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
A A+ +P ++ ++EM N W RDTGPT+VVN + + G+DW FN+
Sbjct: 72 PKAFLAEAQKVMPSHVTLVEMDSNDCWARDTGPTVVVNDNG--------ECRGVDWGFNA 123
Query: 127 WGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNK 186
WGG + G Y W D QVA+++L R+ ++LEGGSIHVDGEGTC+T+ ECLLN
Sbjct: 124 WGGHNGGLYFPWDKDEQVAQQMLKQHGFARYSAPLILEGGSIHVDGEGTCMTSAECLLNA 183
Query: 187 NRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
NRNP LTK QIE+ L+ YL V + IWL G++ DG
Sbjct: 184 NRNPELTKEQIEDLLRDYLNVKQFIWLQDGVYMDETDG 221
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ +G PR AG RLA SYVNF I N I+ P D D A + L + FP+YE++G+
Sbjct: 290 VTEGTGVPRTAGERLAGSYVNFLITNNRIVFPML-DPATDDIAAQKLQEIFPEYEIIGVP 348
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ P+
Sbjct: 349 -AREILLGGGNIHCITQQIPS 368
>gi|238754609|ref|ZP_04615963.1| agmatine deiminase [Yersinia ruckeri ATCC 29473]
gi|238707240|gb|EEP99603.1| agmatine deiminase [Yersinia ruckeri ATCC 29473]
Length = 348
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 125/211 (59%), Gaps = 11/211 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAEW P WM WP R DNWR + AQ+ FAKVA AI++ PV + A E
Sbjct: 1 MPAEWAPQDAVWMLWPYRQ---DNWRGKGIPAQQTFAKVAEAIARATPVYMGVPARFMEQ 57
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
A + +P N+ ++EM + +W RDTGPTIV+N G +DW FN+WGG+ G
Sbjct: 58 ANATMPANVTLVEMECDDAWMRDTGPTIVINGKGERRG--------VDWQFNAWGGLLGG 109
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
Y DW D +VA ++ + ++LEGGSIH DGEGT LTT ECLLN NRNPHL+
Sbjct: 110 LYADWQQDEKVAEQVNQFHHCQSYTAPLILEGGSIHTDGEGTLLTTAECLLNPNRNPHLS 169
Query: 194 KGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
+ QIE L+ YLGV IWL G++ DG
Sbjct: 170 QQQIEQLLREYLGVTHFIWLQDGVYNDETDG 200
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 225 EAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERARE 284
+A PR AG RLA SYVN+ I+N II P D + D A +L Q +P Y ++G+ ARE
Sbjct: 273 DAVPRTAGERLAGSYVNYLISNQQIIFPML-DSRTDDLAKSLLQQMYPGYAILGVP-ARE 330
Query: 285 IVLGGGNIHCITQQQP 300
I+LGGGNIHCITQQ P
Sbjct: 331 ILLGGGNIHCITQQIP 346
>gi|307128935|ref|YP_003880951.1| Agmatine deiminase [Dickeya dadantii 3937]
gi|306526464|gb|ADM96394.1| Agmatine deiminase [Dickeya dadantii 3937]
Length = 367
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 105/221 (47%), Positives = 132/221 (59%), Gaps = 13/221 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRD--DALHAQRVFAKVATAISKFEPVT 63
TP G+ MPAEW PH WM WP R DNWR DA+ AQR FA VA AI++ PV
Sbjct: 7 TPLQDGFSMPAEWAPHDAVWMLWPYRR---DNWRSQGDAIPAQRTFAAVAAAIAQTTPVI 63
Query: 64 VCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWN 123
+ Q A+S +P + ++EM + +W RDTGPT+V+N + G +DW
Sbjct: 64 MGVPRDQMALAKSVMPAGVTLVEMESDDAWMRDTGPTVVLNDAGERRG--------VDWQ 115
Query: 124 FNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECL 183
FN+WGG G Y DW D +VA ++L+ R+ ++LEGGSIH DGEGT LTT ECL
Sbjct: 116 FNAWGGALGGLYEDWRRDEKVAAQVLAYHGDARYAAPLILEGGSIHTDGEGTLLTTAECL 175
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LN NRNPHL K QIE L+ YLGV IWL G++ DG
Sbjct: 176 LNPNRNPHLNKAQIEQLLRDYLGVSAFIWLEEGVYNDETDG 216
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ DG A R AG+RLA SYVNF I+N II P D++ D EA +L Q FP Y V G+
Sbjct: 285 VTDGNAIERNAGSRLAGSYVNFLISNQQIIYPLL-DERTDAEAHALLQQMFPGYLVSGVP 343
Query: 281 RAREIVLGGGNIHCITQQQPAIPT 304
AREI+LGGGNIHCITQQ PA T
Sbjct: 344 -AREILLGGGNIHCITQQIPAAKT 366
>gi|238897809|ref|YP_002923488.1| agmatine deiminase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229465566|gb|ACQ67340.1| agmatine deiminase, PAD_porph domain protein [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 363
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 127/220 (57%), Gaps = 12/220 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEW H WM WP R+ DNWRD AL Q+ FA++A AIS+ PV +
Sbjct: 11 TPQKDGFYMPAEWAAHQAIWMLWPYRH---DNWRDHALPVQKTFAQIAEAISQTTPVYMG 67
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A A+ + I ++EM+ + +W RDTGPT+V N S ++ + W FN
Sbjct: 68 VPAIFMSQAKKIMSSQINLVEMNSDDAWVRDTGPTMVTNGS---------EIRAVHWKFN 118
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WGG G Y DW D +VA+KI + ++LEGGSIH DGEGT LTT ECLL+
Sbjct: 119 AWGGALGGLYDDWRKDEKVAQKISQFHNYSLYKAPIILEGGSIHTDGEGTLLTTSECLLH 178
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGE 225
KNRNP LT+ IE L YLGV IWLP GL DG
Sbjct: 179 KNRNPDLTQSNIEKVLVEYLGVTHFIWLPEGLCNDETDGH 218
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 218 FGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVV 277
G++ +G + R G RLA SY+NF N I+ P D D EA + + FP Y++
Sbjct: 284 IGILANGSS--RQPGERLAGSYINFLNTNQQIVFPLLNDPH-DTEAGEIFKKIFPDYQIT 340
Query: 278 GIERAREIVLGGGNIHCITQQQP 300
GI ARE++LGGGNIHC+TQQ P
Sbjct: 341 GIP-AREVLLGGGNIHCVTQQVP 362
>gi|294615509|ref|ZP_06695373.1| agmatine deiminase [Enterococcus faecium E1636]
gi|291591627|gb|EFF23272.1| agmatine deiminase [Enterococcus faecium E1636]
Length = 339
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 132/217 (60%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ +P G+ + EW H +C++ WP ER DNWR AQ+ +A+VA I++FE V
Sbjct: 2 LESSPKKDGFQLAPEWSFHKECYLIWP---ERPDNWRLGGKPAQKAYAEVAEVIARFENV 58
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ S Q+ NAR QLPE IRV+E+S N +W +DTGP V+N +V G+D+
Sbjct: 59 TMLVSHQQFLNARYQLPEKIRVLEVSNNDAWIKDTGPLYVMNSLG--------EVRGVDF 110
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG+ DG + W D +A+KI ER+ + VLEG SIH DGEGT TEE
Sbjct: 111 RFNAWGGLLDGLFFPWDQDDLLAQKICEQERIEYYQLQEFVLEGCSIHTDGEGTLFATEE 170
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL++ RNP L K IE LK Y G+ KI+W PRG F
Sbjct: 171 CLLSEGRNPQLDKESIEKILKEYCGIEKIVWFPRGFF 207
>gi|418025445|ref|ZP_12664423.1| Agmatine deiminase [Shewanella baltica OS625]
gi|353535057|gb|EHC04621.1| Agmatine deiminase [Shewanella baltica OS625]
Length = 370
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 100/222 (45%), Positives = 131/222 (59%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ P+ G+ MPAEW WM WP R DNWR +AQ FAKVA AI PV
Sbjct: 11 LTTKPSQDGFHMPAEWAAQQAVWMIWP---HRPDNWRSAGAYAQATFAKVADAIGGATPV 67
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+ +P ++ ++EM N W RDTGPT+VVN + + G+DW
Sbjct: 68 YMGVPKAFLAEAQKVMPSHVTLVEMDSNDCWARDTGPTVVVNDNG--------ECRGVDW 119
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG + G Y W D QVA+++L+ R+ ++LEGGSIHVDGEGTC+T+ EC
Sbjct: 120 GFNAWGGHNGGLYFPWDKDEQVAQQMLAQHGFARYSAPLILEGGSIHVDGEGTCMTSAEC 179
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNP LTK QIE+ L+ YL V + IWL G++ DG
Sbjct: 180 LLNANRNPDLTKEQIEDLLRDYLNVKQFIWLQDGVYMDETDG 221
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ +G PR G RLA SYVNF I N I+ P D D A + L + FP+YE+VG+
Sbjct: 290 VTEGTGVPRTEGERLAGSYVNFLITNNRIVFPLL-DPTTDDIAAQKLQEIFPEYEIVGVP 348
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ P+
Sbjct: 349 -AREILLGGGNIHCITQQIPS 368
>gi|377810376|ref|YP_005005597.1| agmatine deiminase [Pediococcus claussenii ATCC BAA-344]
gi|361057117|gb|AEV95921.1| agmatine deiminase [Pediococcus claussenii ATCC BAA-344]
Length = 367
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 93/218 (42%), Positives = 136/218 (62%), Gaps = 12/218 (5%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
ME+NG P+ G+ MPAE+EP Q +M WP +R DNWR+ AQ F+K+A I+KF+
Sbjct: 1 MEINGFPSQEGFRMPAEFEPVDQSYMIWP---QRSDNWRNGGKPAQHAFSKLAEMIAKFQ 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
P+T+ + +Q++NAR L + IRV+EMS N +W +D GP + N+ ++ GI
Sbjct: 58 PLTMLVNQSQYQNARRSLSKKIRVVEMSSNDAWIKDVGPFYITNRK---------EIRGI 108
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
D+ FN+WGG+ DG Y W D Q+++KIL + MVLEG ++ VDGEGT +TT+
Sbjct: 109 DFEFNAWGGLVDGLYFPWDKDNQISQKILDLSETNYYRSGMVLEGCAVMVDGEGTLITTD 168
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
+ +L++ RN +TK EN Y G+ K IWL +G F
Sbjct: 169 DVILSEGRNKGMTKDHAENIFAHYFGIKKTIWLKQGYF 206
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G RL A+YVN+ N II P F D + D +A R+L +PK+EV I ARE +
Sbjct: 289 PRFVGQRLTATYVNYLTINNIIIMPIFDDPE-DKKAKRLLQNLYPKFEVHTI-NAREFLN 346
Query: 288 GGGNIHCITQQQPAI 302
GGG IH + P I
Sbjct: 347 GGGGIHTVVSSVPTI 361
>gi|427395532|ref|ZP_18888454.1| agmatine deiminase [Enterococcus durans FB129-CNAB-4]
gi|430963299|ref|ZP_19487591.1| agmatine deiminase [Enterococcus faecium E1576]
gi|431011217|ref|ZP_19489961.1| agmatine deiminase [Enterococcus faecium E1578]
gi|431264145|ref|ZP_19506033.1| agmatine deiminase [Enterococcus faecium E1623]
gi|425724032|gb|EKU86918.1| agmatine deiminase [Enterococcus durans FB129-CNAB-4]
gi|430555724|gb|ELA95261.1| agmatine deiminase [Enterococcus faecium E1576]
gi|430560239|gb|ELA99545.1| agmatine deiminase [Enterococcus faecium E1578]
gi|430576581|gb|ELB15232.1| agmatine deiminase [Enterococcus faecium E1623]
Length = 361
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 132/217 (60%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ +P G+ + EW H +C++ WP ER DNWR AQ+ +A+VA I++FE V
Sbjct: 2 LESSPKKDGFQLAPEWSFHKECYLIWP---ERPDNWRLGGKPAQKAYAEVAEVIARFENV 58
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ S Q+ NAR QLPE IRV+E+S N +W +DTGP V+N +V G+D+
Sbjct: 59 TMLVSHQQFLNARYQLPEKIRVLEVSNNDAWIKDTGPLYVMNSLG--------EVRGVDF 110
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG+ DG + W D +A+KI ER+ + VLEG SIH DGEGT TEE
Sbjct: 111 RFNAWGGLLDGLFFPWDQDDLLAQKICEQERIEYYQLQEFVLEGCSIHTDGEGTLFATEE 170
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL++ RNP L K IE LK Y G+ KI+W PRG F
Sbjct: 171 CLLSEGRNPQLDKESIEKILKEYCGIEKIVWFPRGFF 207
>gi|406580140|ref|ZP_11055359.1| agmatine deiminase [Enterococcus sp. GMD4E]
gi|406582333|ref|ZP_11057459.1| agmatine deiminase [Enterococcus sp. GMD3E]
gi|406584604|ref|ZP_11059630.1| agmatine deiminase [Enterococcus sp. GMD2E]
gi|406589772|ref|ZP_11064195.1| agmatine deiminase [Enterococcus sp. GMD1E]
gi|410936903|ref|ZP_11368765.1| agmatine deiminase [Enterococcus sp. GMD5E]
gi|416135219|ref|ZP_11598470.1| Putative agmatine deiminase 1 [Enterococcus faecium E4452]
gi|430844969|ref|ZP_19462866.1| agmatine deiminase [Enterococcus faecium E1050]
gi|430867129|ref|ZP_19482252.1| agmatine deiminase [Enterococcus faecium E1574]
gi|431237940|ref|ZP_19503355.1| agmatine deiminase [Enterococcus faecium E1622]
gi|431290407|ref|ZP_19506542.1| agmatine deiminase [Enterococcus faecium E1626]
gi|431744968|ref|ZP_19533832.1| agmatine deiminase [Enterococcus faecium E2071]
gi|364092251|gb|EHM34640.1| Putative agmatine deiminase 1 [Enterococcus faecium E4452]
gi|404454580|gb|EKA01505.1| agmatine deiminase [Enterococcus sp. GMD4E]
gi|404458258|gb|EKA04700.1| agmatine deiminase [Enterococcus sp. GMD3E]
gi|404463892|gb|EKA09469.1| agmatine deiminase [Enterococcus sp. GMD2E]
gi|404470338|gb|EKA14980.1| agmatine deiminase [Enterococcus sp. GMD1E]
gi|410734496|gb|EKQ76415.1| agmatine deiminase [Enterococcus sp. GMD5E]
gi|430496400|gb|ELA72505.1| agmatine deiminase [Enterococcus faecium E1050]
gi|430550593|gb|ELA90381.1| agmatine deiminase [Enterococcus faecium E1574]
gi|430572484|gb|ELB11343.1| agmatine deiminase [Enterococcus faecium E1622]
gi|430582507|gb|ELB20929.1| agmatine deiminase [Enterococcus faecium E1626]
gi|430604743|gb|ELB42177.1| agmatine deiminase [Enterococcus faecium E2071]
Length = 361
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 132/217 (60%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ +P G+ + EW H +C++ WP ER DNWR AQ+ +A+VA I++FE V
Sbjct: 2 LESSPKKDGFQLAPEWSFHKECYLIWP---ERPDNWRLGGKPAQKAYAEVAEVIARFENV 58
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ S Q+ NAR QLPE IRV+E+S N +W +DTGP V+N +V G+D+
Sbjct: 59 TMLVSHQQFLNARYQLPEKIRVLEVSNNDAWIKDTGPLYVMNSLG--------EVRGVDF 110
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG+ DG + W D +A+KI ER+ + VLEG SIH DGEGT TEE
Sbjct: 111 RFNAWGGLLDGLFFPWDQDDLLAQKICEQERIEYYQLQEFVLEGCSIHTDGEGTLFATEE 170
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL++ RNP L K IE LK Y G+ KI+W PRG F
Sbjct: 171 CLLSEGRNPQLDKESIEKILKEYCGIEKIVWFPRGFF 207
>gi|293569212|ref|ZP_06680513.1| agmatine deiminase [Enterococcus faecium E1071]
gi|291588080|gb|EFF19927.1| agmatine deiminase [Enterococcus faecium E1071]
Length = 361
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 132/217 (60%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ +P G+ + EW H +C++ WP ER DNWR AQ+ +A+VA I++FE V
Sbjct: 2 LESSPKKDGFQLAPEWSFHKECYLIWP---ERPDNWRLGGKPAQKAYAEVAEVIARFENV 58
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ S Q+ NAR QLPE IRV+E+S N +W +DTGP V+N +V G+D+
Sbjct: 59 TMLVSHQQFLNARYQLPEKIRVLEVSNNDAWIKDTGPLYVMNSLG--------EVRGVDF 110
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG+ DG + W D +A+KI ER+ + VLEG SIH DGEGT TEE
Sbjct: 111 RFNAWGGLLDGLFFPWDQDDLLAQKICEQERIEYYQLQEFVLEGCSIHTDGEGTLFATEE 170
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL++ RNP L K IE LK Y G+ KI+W PRG F
Sbjct: 171 CLLSEGRNPQLDKESIEKILKEYCGIEKIVWFPRGFF 207
>gi|430853636|ref|ZP_19471364.1| agmatine deiminase [Enterococcus faecium E1258]
gi|430540717|gb|ELA80919.1| agmatine deiminase [Enterococcus faecium E1258]
Length = 361
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 132/217 (60%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ +P G+ + EW H +C++ WP ER DNWR AQ+ +A+VA I++FE V
Sbjct: 2 LESSPKKDGFQLAPEWSFHKECYLIWP---ERPDNWRLGGKPAQKAYAEVAEVIARFENV 58
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ S Q+ NAR QLPE IRV+E+S N +W +DTGP V+N +V G+D+
Sbjct: 59 TMLVSHQQFLNARYQLPEKIRVLEVSNNDAWIKDTGPLYVMNSLG--------EVRGVDF 110
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG+ DG + W D +A+KI ER+ + VLEG SIH DGEGT TEE
Sbjct: 111 RFNAWGGLLDGLFFPWDQDDLLAQKICEQERIEYYQLQEFVLEGCSIHTDGEGTLFATEE 170
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL++ RNP L K IE LK Y G+ KI+W PRG F
Sbjct: 171 CLLSEGRNPQLDKESIEKILKEYCGIEKIVWFPRGFF 207
>gi|431444850|ref|ZP_19513579.1| agmatine deiminase [Enterococcus faecium E1630]
gi|431760453|ref|ZP_19549052.1| agmatine deiminase [Enterococcus faecium E3346]
gi|430586012|gb|ELB24278.1| agmatine deiminase [Enterococcus faecium E1630]
gi|430623893|gb|ELB60561.1| agmatine deiminase [Enterococcus faecium E3346]
Length = 361
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 132/217 (60%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ +P G+ + EW H +C++ WP ER DNWR AQ+ +A+VA I++FE V
Sbjct: 2 LESSPKKDGFQLAPEWSFHKECYLIWP---ERPDNWRLGGKPAQKAYAEVAEVIARFENV 58
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ S Q+ NAR QLPE IRV+E+S N +W +DTGP V+N +V G+D+
Sbjct: 59 TMLVSHQQFLNARYQLPEKIRVLEVSNNDAWIKDTGPLYVMNSLG--------EVRGVDF 110
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG+ DG + W D +A+KI ER+ + VLEG SIH DGEGT TEE
Sbjct: 111 RFNAWGGLLDGLFFPWDQDDLLAQKICEQERIEYYQLQEFVLEGCSIHTDGEGTLFATEE 170
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL++ RNP L K IE LK Y G+ KI+W PRG F
Sbjct: 171 CLLSEGRNPQLDKESIEKILKEYCGIEKIVWFPRGFF 207
>gi|447913474|ref|YP_007394886.1| Agmatine deiminase [Enterococcus faecium NRRL B-2354]
gi|445189183|gb|AGE30825.1| Agmatine deiminase [Enterococcus faecium NRRL B-2354]
Length = 361
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 132/217 (60%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ +P G+ + EW H +C++ WP ER DNWR AQ+ +A+VA I++FE V
Sbjct: 2 LESSPKKDGFQLAPEWSFHKECYLIWP---ERPDNWRLGGKPAQKAYAEVAEVIARFENV 58
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ S Q+ NAR QLPE IRV+E+S N +W +DTGP V+N +V G+D+
Sbjct: 59 TMLVSHQQFLNARYQLPEKIRVLEVSNNDAWIKDTGPLYVMNSLG--------EVRGVDF 110
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG+ DG + W D +A+KI ER+ + VLEG SIH DGEGT TEE
Sbjct: 111 RFNAWGGLLDGLFFPWDQDDLLAQKICEQERIEYYQLQEFVLEGCSIHTDGEGTLFATEE 170
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL++ RNP L K IE LK Y G+ KI+W PRG F
Sbjct: 171 CLLSEGRNPQLDKESIEKILKEYCGIEKIVWFPRGFF 207
>gi|294618848|ref|ZP_06698366.1| agmatine deiminase [Enterococcus faecium E1679]
gi|430851177|ref|ZP_19468930.1| agmatine deiminase [Enterococcus faecium E1185]
gi|431384750|ref|ZP_19511491.1| agmatine deiminase [Enterococcus faecium E1627]
gi|431522754|ref|ZP_19516703.1| agmatine deiminase [Enterococcus faecium E1634]
gi|431698484|ref|ZP_19524847.1| agmatine deiminase [Enterococcus faecium E1904]
gi|291594903|gb|EFF26262.1| agmatine deiminase [Enterococcus faecium E1679]
gi|430534411|gb|ELA74863.1| agmatine deiminase [Enterococcus faecium E1185]
gi|430580907|gb|ELB19365.1| agmatine deiminase [Enterococcus faecium E1627]
gi|430584936|gb|ELB23245.1| agmatine deiminase [Enterococcus faecium E1634]
gi|430597444|gb|ELB35241.1| agmatine deiminase [Enterococcus faecium E1904]
Length = 361
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 132/217 (60%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ +P G+ + EW H +C++ WP ER DNWR AQ+ +A+VA I++FE V
Sbjct: 2 LESSPKKDGFQLAPEWSFHKECYLIWP---ERPDNWRLGGKPAQKAYAEVAEVIARFENV 58
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ S Q+ NAR QLPE IRV+E+S N +W +DTGP V+N +V G+D+
Sbjct: 59 TMLVSHQQFLNARYQLPEKIRVLEVSNNDAWIKDTGPLYVMNSLG--------EVRGVDF 110
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG+ DG + W D +A+KI ER+ + VLEG SIH DGEGT TEE
Sbjct: 111 RFNAWGGLLDGLFFPWDQDDLLAQKICEQERIEYYQLQEFVLEGCSIHTDGEGTLFATEE 170
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL++ RNP L K IE LK Y G+ KI+W PRG F
Sbjct: 171 CLLSEGRNPQLDKESIEKILKEYCGIEKIVWFPRGFF 207
>gi|153001652|ref|YP_001367333.1| agmatine deiminase [Shewanella baltica OS185]
gi|166919516|sp|A6WR31.1|AGUA_SHEB8 RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|151366270|gb|ABS09270.1| Agmatine deiminase [Shewanella baltica OS185]
Length = 370
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/222 (44%), Positives = 129/222 (58%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ P+ G+ MPAEW WM WP R DNWR +AQ FAKVA AI PV
Sbjct: 11 LTTKPSQDGFYMPAEWAAQQAVWMIWP---HRPDNWRSAGAYAQATFAKVADAIGGATPV 67
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+ +P ++ ++EM N W RDTGPT+V+N + G+DW
Sbjct: 68 YMGVPKAFLAEAQKVMPSHVTLVEMDSNDCWARDTGPTVVINAEG--------ECRGVDW 119
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG + G Y W D QVA+++L R+ ++LEGGSIHVDGEGTC+T+ EC
Sbjct: 120 GFNAWGGHNGGLYFPWDKDEQVAQQMLKQHGFARYSAPLILEGGSIHVDGEGTCMTSAEC 179
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNP LTK QIE+ L+ YL V + IWL G++ DG
Sbjct: 180 LLNANRNPDLTKEQIEDLLRDYLNVKQFIWLQDGVYMDETDG 221
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ +G PR AG RLA SYVNF I N I+ P D D A + L + FP+YE+VG+
Sbjct: 290 VTEGTGVPRTAGERLAGSYVNFLITNHRIVFPLL-DPTTDDIAAQKLQEIFPEYEIVGVP 348
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ P+
Sbjct: 349 -AREILLGGGNIHCITQQIPS 368
>gi|431768651|ref|ZP_19557084.1| agmatine deiminase [Enterococcus faecium E1321]
gi|430628519|gb|ELB64953.1| agmatine deiminase [Enterococcus faecium E1321]
Length = 217
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 133/219 (60%), Gaps = 12/219 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ +P G+ + EW H +C++ WP ER DNWR AQ+ +A+VA I++FE V
Sbjct: 2 LESSPKKDGFQLAPEWSFHKECYLIWP---ERPDNWRLGGKPAQKAYAEVAEVIARFENV 58
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ S Q+ NAR QLPE IRV+E+S N +W +DTGP V+N +V G+D+
Sbjct: 59 TMLVSHQQFLNARYQLPEKIRVLEVSNNDAWIKDTGPLYVMNSLG--------EVRGVDF 110
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG+ DG + W D +A+KI ER+ + VLEG SIH DGEGT TEE
Sbjct: 111 RFNAWGGLLDGLFFPWDQDDLLAQKICEQERIEYYQLQEFVLEGCSIHTDGEGTLFATEE 170
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGM 220
CLL++ RNP L K IE LK Y G+ KI+W PRG F M
Sbjct: 171 CLLSEGRNPQLDKESIEKILKEYCGIEKIVWFPRGFFWM 209
>gi|420550803|ref|ZP_15048363.1| agmatine deiminase [Yersinia pestis PY-02]
gi|420599407|ref|ZP_15092015.1| agmatine deiminase [Yersinia pestis PY-11]
gi|420620948|ref|ZP_15111214.1| agmatine deiminase [Yersinia pestis PY-15]
gi|420689736|ref|ZP_15173239.1| agmatine deiminase [Yersinia pestis PY-52]
gi|420766886|ref|ZP_15240379.1| agmatine deiminase [Yersinia pestis PY-72]
gi|420782783|ref|ZP_15254524.1| agmatine deiminase [Yersinia pestis PY-89]
gi|420831117|ref|ZP_15297946.1| agmatine deiminase [Yersinia pestis PY-99]
gi|420841095|ref|ZP_15306965.1| agmatine deiminase [Yersinia pestis PY-101]
gi|391431986|gb|EIQ93474.1| agmatine deiminase [Yersinia pestis PY-02]
gi|391480845|gb|EIR37441.1| agmatine deiminase [Yersinia pestis PY-11]
gi|391495962|gb|EIR50962.1| agmatine deiminase [Yersinia pestis PY-15]
gi|391574978|gb|EIS21781.1| agmatine deiminase [Yersinia pestis PY-52]
gi|391644145|gb|EIS82185.1| agmatine deiminase [Yersinia pestis PY-72]
gi|391665016|gb|EIT00641.1| agmatine deiminase [Yersinia pestis PY-89]
gi|391713384|gb|EIT44164.1| agmatine deiminase [Yersinia pestis PY-99]
gi|391719488|gb|EIT49586.1| agmatine deiminase [Yersinia pestis PY-101]
Length = 348
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 128/211 (60%), Gaps = 11/211 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAEW P WM WP R DNWR A+ AQ+ FAKVA AIS+ PV + A
Sbjct: 1 MPAEWAPQDAVWMLWPYRQ---DNWRGKAIPAQQTFAKVAEAISRATPVFMGVPAEFMAQ 57
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
A++ +P N+ ++EM+ + +W RDTGPT+V+N ++ +DW FN+WGG++ G
Sbjct: 58 AKATMPANVTLVEMASDDAWMRDTGPTMVINGAAERRA--------VDWQFNAWGGLNGG 109
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
Y DW D +VA ++ + + ++LEGGSIH DGEGT LTT ECLLN NRNPHL
Sbjct: 110 LYADWQQDEKVAVQVSDFLKNAHYSAPLILEGGSIHTDGEGTLLTTAECLLNPNRNPHLN 169
Query: 194 KGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
+ QIE L YLGV IWL G++ DG
Sbjct: 170 QAQIEQLLCDYLGVTHFIWLQDGVYNDETDG 200
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 225 EAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERARE 284
+A PR AG RLA SYVNF I+N II P D + DG+A +L Q FP Y +VG+ ARE
Sbjct: 273 DAVPRTAGERLAGSYVNFLISNQQIIFPLL-DSRTDGQANDLLQQMFPGYAIVGVP-ARE 330
Query: 285 IVLGGGNIHCITQQQPA 301
I+LGGGNIHCITQQ PA
Sbjct: 331 ILLGGGNIHCITQQIPA 347
>gi|117921902|ref|YP_871094.1| agmatine deiminase [Shewanella sp. ANA-3]
gi|166919518|sp|A0L0W9.1|AGUA_SHESA RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|117614234|gb|ABK49688.1| Porphyromonas-type peptidyl-arginine deiminase [Shewanella sp.
ANA-3]
Length = 370
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 129/223 (57%), Gaps = 11/223 (4%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++ P+ G+ MPAEW WM WP R DNWR +AQ FAKVA AI P
Sbjct: 10 QLTTKPSEDGFYMPAEWAAQQAVWMIWPYR---PDNWRSAGAYAQATFAKVADAIGGATP 66
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
V + A A++ +P ++ ++E+ N W RDTGPT+VVN + G+D
Sbjct: 67 VYMGVPQAFLAEAQTVMPSHVTLVEIDSNDCWARDTGPTVVVNAEG--------ECRGVD 118
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
W FN+WGG + G Y W D QVA ++L R+ ++LEGGSIHVDGEGTC+TT E
Sbjct: 119 WGFNAWGGHNGGLYFPWDKDEQVAAQMLKQHGFARYSAPLILEGGSIHVDGEGTCMTTAE 178
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
CLLN NRNP LTK QIE L+ YL V + IWL G++ DG
Sbjct: 179 CLLNANRNPDLTKEQIEALLRDYLNVKQFIWLEEGVYMDETDG 221
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ +G PR AG RLA SYVNF I N I+ P D D A + L + FP++++VG+
Sbjct: 290 VTEGTGVPRTAGERLAGSYVNFLITNDRIVFPLL-DPATDDIAAQKLQEIFPEHKIVGVP 348
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ P+
Sbjct: 349 -AREILLGGGNIHCITQQIPS 368
>gi|332162809|ref|YP_004299386.1| agmatine deiminase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|386309776|ref|YP_006005832.1| agmatine deiminase [Yersinia enterocolitica subsp. palearctica Y11]
gi|418240148|ref|ZP_12866690.1| agmatine deiminase [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|433551135|ref|ZP_20507178.1| Agmatine deiminase [Yersinia enterocolitica IP 10393]
gi|318604350|emb|CBY25848.1| agmatine deiminase [Yersinia enterocolitica subsp. palearctica Y11]
gi|325667039|gb|ADZ43683.1| agmatine deiminase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|330858999|emb|CBX69357.1| putative agmatine deiminase [Yersinia enterocolitica W22703]
gi|351780408|gb|EHB22482.1| agmatine deiminase [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|431788234|emb|CCO70218.1| Agmatine deiminase [Yersinia enterocolitica IP 10393]
Length = 374
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 130/222 (58%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ GTP G+ MPAEW WM WP R DNW + AQ+ FAKVA AIS+ PV
Sbjct: 16 LPGTPQQDGFFMPAEWAKQDAVWMLWPYRQ---DNWHGKGIPAQQTFAKVAEAISRTTPV 72
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A++ LP +I ++EM+ + +W RDTGPT+V+N + +DW
Sbjct: 73 FMGVPAEFMAQAKATLPASITLVEMASDDAWMRDTGPTMVINGAGERRA--------VDW 124
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG++ G Y +W D ++A ++ + +VLEGGSIH DGEGT LTT EC
Sbjct: 125 QFNAWGGLNGGLYANWQQDEKIAVQVSDFLNNAHYSAPLVLEGGSIHTDGEGTLLTTAEC 184
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNPHL + QIE L+ YLGV IWL G++ DG
Sbjct: 185 LLNPNRNPHLNQVQIEQLLREYLGVTHFIWLQDGVYNDETDG 226
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 225 EAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERARE 284
+A PR AG RLA SYVNF I+N II P D DG A +L Q FP Y +VG+ ARE
Sbjct: 299 DAVPRTAGERLAGSYVNFLISNQQIIYPLL-DSSTDGLAHDLLQQIFPGYAIVGVP-ARE 356
Query: 285 IVLGGGNIHCITQQQPA 301
I+LGGGNIHCITQQ PA
Sbjct: 357 ILLGGGNIHCITQQIPA 373
>gi|417917488|ref|ZP_12561047.1| agmatine deiminase [Streptococcus parasanguinis SK236]
gi|342830125|gb|EGU64464.1| agmatine deiminase [Streptococcus parasanguinis SK236]
Length = 370
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 131/217 (60%), Gaps = 16/217 (7%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP + G+ MP E+E Q WM WP R DNWR A AQ+ F VA AIS+FEPV++C
Sbjct: 9 TPKVDGFRMPGEFEEQEQIWMLWPWRN---DNWRLGAKPAQKAFLDVAKAISEFEPVSLC 65
Query: 66 ASAAQWENARSQLP----ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
Q+ENA +++ ENIRVIEM+ + SW RD GPT ++N +D
Sbjct: 66 VPPLQFENAIARVSALNCENIRVIEMTNDDSWIRDCGPTFLINDKGERRA--------VD 117
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG+ DG Y W D VARK+ + VLEGGSIHVDGEGT + TE
Sbjct: 118 WEFNAWGGLVDGLYFPWDQDALVARKVCELTNTDSYKTEDFVLEGGSIHVDGEGTVMVTE 177
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
CLL+ +RNPHL+K +IE +LK YL K+IW+ G+
Sbjct: 178 MCLLHPSRNPHLSKEEIEQKLKDYLNCEKVIWVKDGI 214
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
A PR G ASY+NF I NGGII PQ+GD+ D AV + FP +VVG+E EI
Sbjct: 295 AIPREEGEVAIASYLNFLIVNGGIILPQYGDEN-DALAVEQVQAMFPDRKVVGVE-TTEI 352
Query: 286 VLGGGNIHCITQQQPA 301
GGGNIHCITQQQPA
Sbjct: 353 AYGGGNIHCITQQQPA 368
>gi|113971619|ref|YP_735412.1| agmatine deiminase [Shewanella sp. MR-4]
gi|123130087|sp|Q0HF12.1|AGUA_SHESM RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|113886303|gb|ABI40355.1| Porphyromonas-type peptidyl-arginine deiminase [Shewanella sp.
MR-4]
Length = 370
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 128/223 (57%), Gaps = 11/223 (4%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++ P+ G+ MPAEW WM WP R DNWR +AQ FAKVA AI P
Sbjct: 10 QLTTKPSQDGFYMPAEWAAQQAVWMIWPYR---PDNWRSAGAYAQATFAKVADAIGGATP 66
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
V + A A+ +P ++ ++E+ N W RDTGPT+VVN + G+D
Sbjct: 67 VYMGVPQAFLAEAQKVMPSHVTLVEIDSNDCWARDTGPTVVVNAEG--------ECRGVD 118
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
W FN+WGG + G Y W D QVA ++L R+ ++LEGGSIHVDGEGTC+TT E
Sbjct: 119 WGFNAWGGHNGGLYFPWDKDEQVAAQMLKQHGFARYSAPLILEGGSIHVDGEGTCMTTAE 178
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
CLLN NRNP LTK QIE L+ YL V + IWL G++ DG
Sbjct: 179 CLLNANRNPDLTKEQIEALLRDYLNVKQFIWLEEGVYMDETDG 221
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ +G PR AG RLA SYVNF I N I+ P D D A + L FP++++VG+
Sbjct: 290 VTEGTGVPRTAGERLAGSYVNFLITNDRIVFPLL-DPATDDIAAQKLQDIFPEHKIVGVP 348
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ P+
Sbjct: 349 -AREILLGGGNIHCITQQIPS 368
>gi|114046169|ref|YP_736719.1| agmatine deiminase [Shewanella sp. MR-7]
gi|123131751|sp|Q0HYZ3.1|AGUA_SHESR RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|113887611|gb|ABI41662.1| Porphyromonas-type peptidyl-arginine deiminase [Shewanella sp.
MR-7]
Length = 370
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 128/223 (57%), Gaps = 11/223 (4%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++ P+ G+ MPAEW WM WP R DNWR +AQ FAKVA AI P
Sbjct: 10 QLTTKPSQDGFYMPAEWAAQQAVWMIWPYR---PDNWRSAGAYAQATFAKVADAIGGATP 66
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
V + A A+ +P ++ ++E+ N W RDTGPT+VVN + G+D
Sbjct: 67 VYMGVPQAFLAEAQKVMPSHVTLVEIDSNDCWARDTGPTVVVNAEG--------ECRGVD 118
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
W FN+WGG + G Y W D QVA ++L R+ ++LEGGSIHVDGEGTC+TT E
Sbjct: 119 WGFNAWGGHNGGLYFPWDKDEQVAAQMLKQHGFARYSAPLILEGGSIHVDGEGTCMTTAE 178
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
CLLN NRNP LTK QIE L+ YL V + IWL G++ DG
Sbjct: 179 CLLNANRNPDLTKEQIEALLRDYLNVKQFIWLEEGVYMDETDG 221
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ +G PR AG RLA SYVNF I N I+ P D D A + L FP++++VG+
Sbjct: 290 VTEGTGVPRTAGERLAGSYVNFLITNDRIVFPLL-DPATDDIAAQKLQDIFPEHKIVGVP 348
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ P+
Sbjct: 349 -AREILLGGGNIHCITQQIPS 368
>gi|419800033|ref|ZP_14325344.1| agmatine deiminase [Streptococcus parasanguinis F0449]
gi|385696402|gb|EIG26890.1| agmatine deiminase [Streptococcus parasanguinis F0449]
Length = 370
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 131/217 (60%), Gaps = 16/217 (7%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP + G+ MP E+E Q WM WP R DNWR A AQ+ F VA AIS+FEPV++C
Sbjct: 9 TPKVDGFRMPGEFEEQEQIWMLWPWRN---DNWRLGAKPAQKAFLDVAKAISEFEPVSLC 65
Query: 66 ASAAQWENARSQLP----ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
Q+ENA +++ ENIRVIEM+ + SW RD GPT ++N +D
Sbjct: 66 VPPLQFENAIARVSALDCENIRVIEMTNDDSWIRDCGPTFLINDKGERRA--------VD 117
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG+ DG Y W D VARK+ + VLEGGSIHVDGEGT + TE
Sbjct: 118 WEFNAWGGLVDGLYFPWDQDALVARKVCELTNTDSYKTDDFVLEGGSIHVDGEGTVMVTE 177
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
CLL+ +RNPHL+K +IE +LK YL K+IW+ G+
Sbjct: 178 MCLLHPSRNPHLSKEEIEQKLKDYLNCEKVIWVKDGI 214
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
A PR G ASY+NF I NGG+I PQ+GD+ D AV + FP +VVG+E EI
Sbjct: 295 AIPREEGEVAIASYLNFLIVNGGVILPQYGDEN-DALAVEQVQAMFPDRKVVGVE-TTEI 352
Query: 286 VLGGGNIHCITQQQPA 301
GGGNIHCITQQQPA
Sbjct: 353 AYGGGNIHCITQQQPA 368
>gi|337282034|ref|YP_004621505.1| agmatine deiminase [Streptococcus parasanguinis ATCC 15912]
gi|335369627|gb|AEH55577.1| agmatine deiminase [Streptococcus parasanguinis ATCC 15912]
Length = 370
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 131/217 (60%), Gaps = 16/217 (7%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP + G+ MP E+E Q WM WP R DNWR A AQ+ F VA AIS+FEPV++C
Sbjct: 9 TPKVDGFRMPGEFEEQEQIWMLWPWRN---DNWRLGAKPAQKAFLDVAKAISEFEPVSLC 65
Query: 66 ASAAQWENARSQLP----ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
Q+ENA +++ ENIRVIEM+ + SW RD GPT ++N +D
Sbjct: 66 VPPLQFENAIARVSALNCENIRVIEMTNDDSWIRDCGPTFLINDKGERRA--------VD 117
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG+ DG Y W D VARK+ + VLEGGSIHVDGEGT + TE
Sbjct: 118 WEFNAWGGLVDGLYFPWDQDALVARKVCELTNTDSYKTDDFVLEGGSIHVDGEGTVMVTE 177
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
CLL+ +RNPHL+K +IE +LK YL K+IW+ G+
Sbjct: 178 MCLLHPSRNPHLSKEEIEQKLKDYLNCEKVIWVKDGI 214
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
A PR G ASY+NF I NGGII PQ+GD+ D AV+ + FP +VVG+E EI
Sbjct: 295 AIPREEGEVAIASYLNFLIVNGGIILPQYGDEN-DALAVKQVQAMFPDRKVVGVE-TTEI 352
Query: 286 VLGGGNIHCITQQQPA 301
GGGNIHCITQQQPA
Sbjct: 353 AYGGGNIHCITQQQPA 368
>gi|229220631|ref|NP_716518.2| agmatine deiminase AguA [Shewanella oneidensis MR-1]
gi|73622173|sp|Q8EIF2.2|AGUA_SHEON RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|410519571|gb|AAN53963.2| agmatine deiminase AguA [Shewanella oneidensis MR-1]
Length = 370
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/222 (44%), Positives = 129/222 (58%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ P+ G+ MPAEW WM WP R DNWR +AQ FAKV AI PV
Sbjct: 11 LTTKPSQDGFYMPAEWAAQQAVWMIWPYR---PDNWRAAGAYAQATFAKVVDAIGAATPV 67
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A++ +P ++ ++EM N W RDTGPT+VVN + G+DW
Sbjct: 68 YMGVPKAFLAKAKTVMPSHVTLVEMDSNDCWARDTGPTVVVNAEG--------ECRGVDW 119
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG + G Y W D QVA+++L+ R+ ++LEGGSIHVDGEGTC+T+ EC
Sbjct: 120 GFNAWGGHNGGLYFPWDKDEQVAQQMLAQHGFARYRAPLILEGGSIHVDGEGTCMTSAEC 179
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNP LTK QIE L+ YL V + IWL G++ DG
Sbjct: 180 LLNANRNPELTKEQIEGLLRDYLNVKQFIWLQDGVYMDETDG 221
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ +G PR AG RLA SYVNF I N I+ P D D A + L + FP++E+VG+
Sbjct: 290 VTEGTGVPRTAGERLAGSYVNFLITNHRIVFPLL-DPATDDIAAQKLQEIFPEHEIVGVP 348
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ PA
Sbjct: 349 -AREILLGGGNIHCITQQIPA 368
>gi|422584699|ref|ZP_16659802.1| agmatine deiminase, partial [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330869509|gb|EGH04218.1| agmatine deiminase [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 322
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/175 (56%), Positives = 122/175 (69%), Gaps = 10/175 (5%)
Query: 52 VATAISKFEPVTVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASS 110
+A AI++FEPVTV SAAQ++ AR++L NIRV+EMS N +W RD+GPT V+N
Sbjct: 4 IAKAIARFEPVTVAVSAAQYDTARARLDMPNIRVVEMSSNDAWVRDSGPTFVINDRG--- 60
Query: 111 GAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIH 169
+V G++W FN+WGG D G Y W+LD Q+ K+L ER PR+ VLEGGSIH
Sbjct: 61 -----EVRGVNWEFNAWGGFDGGLYAPWNLDSQLGSKVLEIERCPRYVTEGFVLEGGSIH 115
Query: 170 VDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
VDGEGT +TTEECLLN+NRNPHLT+ QIE L YL V K++WLP GLF DG
Sbjct: 116 VDGEGTLITTEECLLNRNRNPHLTREQIEAILGDYLAVDKVVWLPDGLFNDETDG 170
>gi|238763259|ref|ZP_04624224.1| agmatine deiminase [Yersinia kristensenii ATCC 33638]
gi|238698532|gb|EEP91284.1| agmatine deiminase [Yersinia kristensenii ATCC 33638]
Length = 374
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 129/222 (58%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ MPAEW WM WP R DNWR + AQ+ FAKVA AIS+ PV
Sbjct: 16 LPSTPQQDGFFMPAEWAQQDAVWMLWPYRQ---DNWRGKGIPAQQTFAKVAEAISRTTPV 72
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A++ +P ++ ++EM+ + +W RDTGPT+V+N + +DW
Sbjct: 73 FMGVPAEFMAQAKATMPASVTLVEMASDDAWMRDTGPTMVINGAGERRA--------VDW 124
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG++ G Y +W D ++A ++ + +VLEGGSIH DGEGT LTT EC
Sbjct: 125 QFNAWGGLNGGLYANWQQDEKIAVQVSDFLNNAHYSAPLVLEGGSIHTDGEGTLLTTAEC 184
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNPHL + QIE L YLGV IWL G++ DG
Sbjct: 185 LLNPNRNPHLNQAQIEQLLHKYLGVTHFIWLQDGVYNDETDG 226
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 225 EAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERARE 284
+A PR AG RLA SYVNF I+N II P D + DG A +L Q FP Y +VG+ ARE
Sbjct: 299 DAVPRTAGERLAGSYVNFLISNQQIIYPLL-DSRTDGLAHDLLQQIFPDYAIVGVP-ARE 356
Query: 285 IVLGGGNIHCITQQQP 300
I+LGGGNIHCITQQ P
Sbjct: 357 ILLGGGNIHCITQQIP 372
>gi|389579809|ref|ZP_10169836.1| peptidylarginine deiminase-like enzyme [Desulfobacter postgatei
2ac9]
gi|389401444|gb|EIM63666.1| peptidylarginine deiminase-like enzyme [Desulfobacter postgatei
2ac9]
Length = 368
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 165/351 (47%), Gaps = 72/351 (20%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G MPAEWE H CWM WP E ++ A++ +A+VA AI+ FEPV +
Sbjct: 28 TPQSDGLTMPAEWEEHDACWMVWPCSRE---CFKGVLPEAKQTYAEVARAIADFEPVYML 84
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
+ QW AR+ L + +++ + SW RD+ PT V +K KVAGIDW F
Sbjct: 85 VNPEQWTEARNLLGSAVTLVKATCFDSWARDSAPTFVRDKKG--------KVAGIDWVFT 136
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
WG D + +++ R + + R+ +LEGGSIHVDG+GT +TTE+CLL+
Sbjct: 137 GWGHYPITGPCDEGMAIEILRHL----SMRRYTAPFILEGGSIHVDGKGTLITTEQCLLD 192
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG--------------------- 224
RN TK E K YLG+ ++WL GL G G
Sbjct: 193 PKRNAGYTKADFETLFKTYLGIDTVLWLANGLEGDETTGHVDILATFARPGLILLNNCID 252
Query: 225 ----------EAKPRLAGT------------------------RLAASYVNFYIANGGII 250
+AK RLAG R+ SY+NFYI NG II
Sbjct: 253 PDDANFAVTQDAKQRLAGAVDACGKAIEIAEIPQPAPQKWNGERMDLSYINFYIPNGAII 312
Query: 251 TPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
F D D +A ++ Q FP +V I + + GGG IHCITQQQP+
Sbjct: 313 MSSFNDPA-DDQAKEIMQQVFPNRTIVQIP-SLPLFAGGGGIHCITQQQPS 361
>gi|339444432|ref|YP_004710436.1| peptidylarginine deiminase [Eggerthella sp. YY7918]
gi|338904184|dbj|BAK44035.1| peptidylarginine deiminase [Eggerthella sp. YY7918]
Length = 369
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 132/219 (60%), Gaps = 14/219 (6%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
E TP GY MP E+EP WM WP R DNWRD A AQR +A+VA AI++FEP
Sbjct: 6 EDQSTPRKDGYRMPGEFEPQKGIWMLWP---HRPDNWRDGAKPAQRAYAEVARAIARFEP 62
Query: 62 VTVCASAAQWENARSQLP--ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
VT+ A+ +E AR + ++I V+EM+ N +W RD GPT V N V
Sbjct: 63 VTIGANPEDYEAARFEFEADDDILVVEMTSNDAWIRDCGPTFVRNDEG--------DVRA 114
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLT 178
+ W+FN+WGG+ DG Y W D V K+ E R+ P + VLEGGSIHVDGEGT +T
Sbjct: 115 VHWHFNAWGGLVDGLYFPWDQDALVGVKVADLEGAVRYRPDTFVLEGGSIHVDGEGTVIT 174
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
TE CLL++ RNP +T+ IE L+ YL V K+IW+ G+
Sbjct: 175 TEMCLLSEGRNPEMTREDIEGYLREYLNVDKVIWIEDGI 213
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR ASY+NF I NG II PQ+ D ++D AV+ + + FP +EVVG+ RE+
Sbjct: 298 PRTVEDYAIASYMNFLIVNGAIILPQY-DDEYDELAVQQVQEMFPDHEVVGV-STREVAY 355
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQ PA
Sbjct: 356 GGGNIHCITQQVPA 369
>gi|83754996|pdb|2EWO|A Chain A, X-Ray Structure Of Putative Agmatine Deiminase Q8dw17,
Northeast Structural Genomics Target Smr6.
gi|83754997|pdb|2EWO|B Chain B, X-Ray Structure Of Putative Agmatine Deiminase Q8dw17,
Northeast Structural Genomics Target Smr6.
gi|83754998|pdb|2EWO|C Chain C, X-Ray Structure Of Putative Agmatine Deiminase Q8dw17,
Northeast Structural Genomics Target Smr6.
gi|83754999|pdb|2EWO|D Chain D, X-Ray Structure Of Putative Agmatine Deiminase Q8dw17,
Northeast Structural Genomics Target Smr6.
gi|83755000|pdb|2EWO|E Chain E, X-Ray Structure Of Putative Agmatine Deiminase Q8dw17,
Northeast Structural Genomics Target Smr6.
gi|83755001|pdb|2EWO|F Chain F, X-Ray Structure Of Putative Agmatine Deiminase Q8dw17,
Northeast Structural Genomics Target Smr6.
gi|83755002|pdb|2EWO|G Chain G, X-Ray Structure Of Putative Agmatine Deiminase Q8dw17,
Northeast Structural Genomics Target Smr6.
gi|83755003|pdb|2EWO|H Chain H, X-Ray Structure Of Putative Agmatine Deiminase Q8dw17,
Northeast Structural Genomics Target Smr6.
gi|83755004|pdb|2EWO|I Chain I, X-Ray Structure Of Putative Agmatine Deiminase Q8dw17,
Northeast Structural Genomics Target Smr6.
gi|83755005|pdb|2EWO|J Chain J, X-Ray Structure Of Putative Agmatine Deiminase Q8dw17,
Northeast Structural Genomics Target Smr6.
gi|83755006|pdb|2EWO|K Chain K, X-Ray Structure Of Putative Agmatine Deiminase Q8dw17,
Northeast Structural Genomics Target Smr6.
gi|83755007|pdb|2EWO|L Chain L, X-Ray Structure Of Putative Agmatine Deiminase Q8dw17,
Northeast Structural Genomics Target Smr6
Length = 377
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 133/219 (60%), Gaps = 16/219 (7%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N TP G+ P E+E Q W WP R DNWR A AQ+ F +VA AIS+FEPV+
Sbjct: 7 NTTPKQDGFRXPGEFEKQKQIWXLWPWRN---DNWRLGAKPAQKAFLEVAEAISEFEPVS 63
Query: 64 VCASAAQWENARSQLPE----NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
+C Q+ENA +++ E NIR+IE + + +W RD GPT +VN +
Sbjct: 64 LCVPPLQYENALARVSELGSHNIRIIEXTNDDAWIRDCGPTFLVNDKG--------DLRA 115
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLT 178
+DW FN+WGG+ DG Y W D VARK+ E + + VLEGGSIHVDGEGT L
Sbjct: 116 VDWEFNAWGGLVDGLYFPWDQDALVARKVCEIEGVDSYKTKDFVLEGGSIHVDGEGTVLV 175
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
TE CLL+ +RNPHLTK IE++LK YL +K++W+ G+
Sbjct: 176 TEXCLLHPSRNPHLTKEDIEDKLKDYLNCVKVLWVKDGI 214
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G ASY+NF I NGGII PQ+GD+ D A + + + FP +VVG+ R EI
Sbjct: 297 PREEGEXAIASYLNFLIVNGGIILPQYGDEN-DQLAKQQVQEXFPDRKVVGV-RTEEIAY 354
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQQPA
Sbjct: 355 GGGNIHCITQQQPA 368
>gi|410657315|ref|YP_006909686.1| Agmatine deiminase [Dehalobacter sp. DCA]
gi|410660353|ref|YP_006912724.1| Agmatine deiminase [Dehalobacter sp. CF]
gi|409019670|gb|AFV01701.1| Agmatine deiminase [Dehalobacter sp. DCA]
gi|409022709|gb|AFV04739.1| Agmatine deiminase [Dehalobacter sp. CF]
Length = 345
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 167/354 (47%), Gaps = 73/354 (20%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
P+ Y MPAEW H + ++ WPV + + + + AI +FEPVTV
Sbjct: 3 PSDINYRMPAEWARHERTFISWPVGVSMCHPENYEVVCEG--YTDIIRAIGEFEPVTVLV 60
Query: 67 SAAQWENARSQL-PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
+ + + I ++ ++ N +W RD GPT +VN +AGI+W+FN
Sbjct: 61 NPDERSLLEGRFRNRQIELLPLAHNDAWLRDNGPTFIVNDQG--------DIAGINWHFN 112
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WGG Y DW LD QVA +IL L F +++EGGS+HVDGEGT LTT ECLLN
Sbjct: 113 AWGGK----YPDWDLDNQVAPQILKHLGLKPFDAPLIMEGGSLHVDGEGTLLTTAECLLN 168
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGE-------------------- 225
NRNP L++ QI LK YL + K+IWL +GL G DG
Sbjct: 169 PNRNPDLSREQITELLKKYLSIHKVIWLEKGLCGDETDGHVDNIACFASPGKILIQVCDD 228
Query: 226 -AKPRLAGTR----------------------------------LAASYVNFYIANGGII 250
P A TR L SY+NFY NGGII
Sbjct: 229 PCDPNYAITRENLAVLNRETDARGRTFEIIPIQQPPAVFADGKRLTLSYLNFYFVNGGII 288
Query: 251 TPQFGDK--KWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
P FG + + D A+R LS FP+ + I I+ GGN+HC TQQ PA+
Sbjct: 289 LPVFGGQAAEADALAIRTLSGIFPERRIRTIN-GMAIIGEGGNVHCTTQQMPAV 341
>gi|81427686|ref|YP_394683.1| peptidylarginine deiminase (amidinotransferase) [Lactobacillus
sakei subsp. sakei 23K]
gi|78609325|emb|CAI54371.1| Putative peptidylarginine deiminase (Amidinotransferase)
[Lactobacillus sakei subsp. sakei 23K]
Length = 367
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 139/230 (60%), Gaps = 12/230 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP Y +PAE + H + M WP ER DNWR+ A AQ+ FA++A I+++EPVT+
Sbjct: 7 TPKEDQYYLPAETKRHRESIMMWP---ERSDNWRNGAKPAQKTFAEIAAIINRYEPVTML 63
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S Q++NAR LP IRVIEMS N +W +D GPT ++N Q ++ +DW FN
Sbjct: 64 VSKEQYQNARHALPAEIRVIEMSYNDAWIKDIGPTYLLN--------QKNQIRAVDWRFN 115
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG+ DG Y W +D QVA+K+ + + +LEG + H DGEGT + TEE +L
Sbjct: 116 AWGGLVDGLYFPWDMDDQVAQKLCELTGIDYYHLEKFILEGCAFHTDGEGTLIVTEESIL 175
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTR 234
++ RN LTK ++E LKAYLG+ K+IWL G F +G+ L+ R
Sbjct: 176 SEGRNGMLTKTEVEAVLKAYLGIEKVIWLKLGYFMDETNGDVDNMLSFVR 225
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G RL ASYVN+Y N II P F D + D A++ L+Q FP ++ + ARE++L
Sbjct: 292 PRYPGDRLTASYVNYYALNDAIILPIFDDPQ-DTVAIQTLTQLFPDRKIEPV-YARELLL 349
Query: 288 GGGNIHCITQQQPA 301
GGG++HC+ PA
Sbjct: 350 GGGDVHCVVAAVPA 363
>gi|261209072|ref|ZP_05923476.1| agmatine deiminase [Enterococcus faecium TC 6]
gi|289567303|ref|ZP_06447681.1| agmatine deiminase [Enterococcus faecium D344SRF]
gi|260076984|gb|EEW64707.1| agmatine deiminase [Enterococcus faecium TC 6]
gi|289160904|gb|EFD08826.1| agmatine deiminase [Enterococcus faecium D344SRF]
Length = 361
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 98/217 (45%), Positives = 131/217 (60%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ +P G+ + EW H +C++ WP ER DNWR AQ+ +A+VA I++FE V
Sbjct: 2 LESSPKKDGFQLAPEWSFHKECYLIWP---ERPDNWRLGGKPAQKAYAEVAEVIARFENV 58
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ S Q+ NAR QLPE IRV+E+S N +W +DTGP V+N +V G+D+
Sbjct: 59 TMLVSHQQFLNARYQLPEKIRVLEVSNNDAWIKDTGPLYVMNSLG--------EVRGVDF 110
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
FN+W G+ DG + W D +A+KI ER+ + VLEG SIH DGEGT TEE
Sbjct: 111 RFNAWCGLLDGLFFPWDQDDLLAQKICEQERIEYYQLQEFVLEGCSIHTDGEGTLFATEE 170
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL++ RNP L K IE LK Y G+ KI+W PRG F
Sbjct: 171 CLLSEGRNPQLDKESIEKILKEYCGIEKIVWFPRGFF 207
>gi|389877207|ref|YP_006370772.1| agmatine deiminase [Tistrella mobilis KA081020-065]
gi|388527991|gb|AFK53188.1| agmatine deiminase [Tistrella mobilis KA081020-065]
Length = 376
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 123/213 (57%), Gaps = 11/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TPA G+ MP E+ P CWM WP ER DNWR A AQ F VATAI+ PVTV
Sbjct: 9 TPAARGFRMPGEFAPQDGCWMIWP---ERPDNWRLGAKPAQAAFTAVATAIADVVPVTVA 65
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
SA QW NARS+LP R++EMS N +W RD GP+ V + + GIDW FN
Sbjct: 66 VSARQWSNARSRLPHQARLVEMSTNDAWMRDVGPSFVTDGAGGR--------LGIDWRFN 117
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WGG DG Y W D VA K+ + + +VLEGG+IH DGEGT TT ECLL+
Sbjct: 118 AWGGFHDGLYFPWDQDDLVAAKVSEIDADGSWRAPVVLEGGAIHSDGEGTVFTTAECLLS 177
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
RN + +E L LG ++IWLPRG+F
Sbjct: 178 PGRNGPDGRAAVEAALGQALGAEQVIWLPRGVF 210
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 226 AKPRLAGTRLAASYVNFYIANGG------IITPQFGDKKWDGEAVRVLSQAFPKYEVVGI 279
++PR AG RLA SYVNF +A+G I+ P + D A ++ A P +E++G+
Sbjct: 291 SQPRRAGDRLAGSYVNFLMAHGAASGRRRIVMPLLDPAR-DQAAADAIATACPGWEILGV 349
Query: 280 ERAREIVLGGGNIHCITQQQPA 301
REI+LGGGNIHCITQQ PA
Sbjct: 350 P-GREILLGGGNIHCITQQVPA 370
>gi|268317067|ref|YP_003290786.1| Agmatine deiminase [Rhodothermus marinus DSM 4252]
gi|262334601|gb|ACY48398.1| Agmatine deiminase [Rhodothermus marinus DSM 4252]
Length = 342
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 126/357 (35%), Positives = 168/357 (47%), Gaps = 77/357 (21%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
PA G+ MP EW PH W+ WP Y R + W D+ +R A V +S+ E V +
Sbjct: 2 PAAQGFRMPPEWAPHRATWLSWP--YNR-ETWPDELEQVERTMADVVRLLSQGEAVYINV 58
Query: 67 SAAQWENARSQLPEN------IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
+ A E QL + +R + + +W RD G VV+ Q +A
Sbjct: 59 NDAAHERHVRQLLDEAGVSGPVRFFHIPTDDAWIRDHGAIFVVHP-------QQRVLAAT 111
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
W FNSWGG Y W D QVAR++ ++P F M+LEGGSI +G GT LTTE
Sbjct: 112 VWGFNSWGG----KYPPWDRDAQVARRMAEALQVPTFDGGMILEGGSIDTNGAGTLLTTE 167
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG---------------- 224
+CLLN NRNPHL + IE LK +LGV +++WL RGL G DG
Sbjct: 168 QCLLNPNRNPHLDRATIEQRLKDFLGVRQVLWLGRGLEGDDTDGHVDDLTRFVAEDVVVT 227
Query: 225 --EAKP-------------RLAGTRL------------------------AASYVNFYIA 245
E P RL RL A+Y NFYIA
Sbjct: 228 AIETNPHDPNHDVLQENLERLRAFRLPDGRPLQIVTLPMPEPLEIAGERVPATYANFYIA 287
Query: 246 NGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
NG ++ P +GD + D A +L + FP+ VV ++ R I+ G G +HC+TQQ PA+
Sbjct: 288 NGLVLMPAYGDAR-DETAREILQRCFPERTVVPVD-CRAIIRGLGALHCLTQQVPAV 342
>gi|257790437|ref|YP_003181043.1| agmatine deiminase [Eggerthella lenta DSM 2243]
gi|257474334|gb|ACV54654.1| agmatine deiminase [Eggerthella lenta DSM 2243]
Length = 371
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 129/219 (58%), Gaps = 14/219 (6%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
E TP GY MP E+EP WM WP R DNWRD A AQ+ +A VA I++FEP
Sbjct: 6 ENESTPKKDGYRMPGEFEPQECIWMLWP---HRPDNWRDGAKPAQKAYADVARGIAQFEP 62
Query: 62 VTVCASAAQWENARSQLP--ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
V V + + A L ENI V+EM+ + SW RD GPT VVN V
Sbjct: 63 VIVGVNPEDYAAAHYVLAGEENILVVEMTSDDSWIRDCGPTFVVNDDG--------DVRA 114
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLT 178
+ W+FN+WGG+ DG Y W D V K+ + R+ P S VLEGGSIHVDGEGT +T
Sbjct: 115 VHWHFNAWGGLVDGLYFPWDQDALVGLKVADLAGVDRYRPDSFVLEGGSIHVDGEGTVMT 174
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
TE CLL++ RNP L+K QIEN L YLGV K+IW+ G+
Sbjct: 175 TEMCLLSEGRNPELSKEQIENYLCEYLGVDKVIWIKDGI 213
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR ASY+NF I N ++ PQ+ D ++D A++ + Q FP+ EVVG+ RE+V
Sbjct: 298 PRTTEDVCIASYMNFLIGNDFVLVPQY-DDEYDEMALQQVQQMFPEREVVGVP-TREVVY 355
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQQPA
Sbjct: 356 GGGNIHCITQQQPA 369
>gi|336312365|ref|ZP_08567315.1| agmatine deiminase [Shewanella sp. HN-41]
gi|335864094|gb|EGM69208.1| agmatine deiminase [Shewanella sp. HN-41]
Length = 370
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/223 (44%), Positives = 127/223 (56%), Gaps = 11/223 (4%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++ P+ G+ MPAEW WM WP R DNWR +AQ FAKVA AI P
Sbjct: 10 QLTTKPSQDGFYMPAEWAAQQAVWMIWPYR---PDNWRSAGAYAQATFAKVADAIGGATP 66
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
V + A A+ +P ++ ++E+ N W RDTGPT+VVN + G+D
Sbjct: 67 VFMGVPHAFLAEAQKVMPSHVTLVEIDSNDCWARDTGPTVVVNAEG--------ECRGVD 118
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
W FN+WGG + G Y W D VA ++L R+ ++LEGGSIHVDGEGTC+TT E
Sbjct: 119 WGFNAWGGHNGGLYFPWDKDELVAAQMLKQHGFARYSAPLILEGGSIHVDGEGTCMTTAE 178
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
CLLN NRNP LTK QIE L+ YL V + IWL G++ DG
Sbjct: 179 CLLNANRNPDLTKEQIEALLRDYLNVKQFIWLEEGVYMDETDG 221
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ +G PR AG RLA SYVNF I N I+ P D D A + L + FP+Y++VG+
Sbjct: 290 VTEGTGVPRTAGERLAGSYVNFLITNDRIVFPLL-DPATDDIAAQKLQEIFPEYKIVGVP 348
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ P+
Sbjct: 349 -AREILLGGGNIHCITQQLPS 368
>gi|408682815|ref|YP_006882642.1| Agmatine deiminase [Streptomyces venezuelae ATCC 10712]
gi|328887144|emb|CCA60383.1| Agmatine deiminase [Streptomyces venezuelae ATCC 10712]
Length = 337
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/346 (36%), Positives = 176/346 (50%), Gaps = 73/346 (21%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
Y MPAEW H C M WP R +D W D Q+ +A VA A+++FEPVT+ A
Sbjct: 4 YRMPAEWSEHEGCLMAWPTR---VDLWHDVLDAVQQEYADVARAVARFEPVTMVAPPGAG 60
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
+ AR++ ++ V+E+ ++ SWFRD+ P V++ + AG+D+ FN+WG
Sbjct: 61 DEARARCGADVTVVELPLDDSWFRDSAPIFVLDGDG--------RRAGVDFRFNAWGRK- 111
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ + D +V+ +L + R M+LEGG+I VDGEGT +TTE+CLL+ NRNP
Sbjct: 112 ---HHPYDSDDRVSALLLEHLGVDRIASDMILEGGAITVDGEGTLITTEQCLLHPNRNPD 168
Query: 192 LTKGQIENELKAYLGVMKIIWLPRG----------------------LFGMIHDGEAKPR 229
LT+ QIE ELK LGV K+IWLP G + + D A P
Sbjct: 169 LTREQIEAELKGRLGVSKVIWLPYGGLLDTETDGHVDGVCAFAAPGKVVVSLPDDPAHPD 228
Query: 230 LAGTR----------------------------------LAASYVNFYIANGGIITPQFG 255
A R + SY+N+Y+ANGG++ P G
Sbjct: 229 YARMRANRAVLEVSTDARGRALEIVDVPQVAFAEVAGGQVEVSYLNYYVANGGVVVPVAG 288
Query: 256 DKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
+ D A+ V+S A+P +VVG+ RA I GGG +HCITQQ PA
Sbjct: 289 VPQ-DMAALDVISAAYPDRKVVGV-RAPVIAWGGGGVHCITQQVPA 332
>gi|325829804|ref|ZP_08163262.1| agmatine deiminase [Eggerthella sp. HGA1]
gi|325487971|gb|EGC90408.1| agmatine deiminase [Eggerthella sp. HGA1]
Length = 371
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 129/219 (58%), Gaps = 14/219 (6%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
E TP GY MP E+EP WM WP R DNWRD A AQ+ +A VA I+++EP
Sbjct: 6 ENESTPKKDGYRMPGEFEPQECIWMLWP---HRPDNWRDGAKPAQKAYADVARGIAQYEP 62
Query: 62 VTVCASAAQWENARSQLP--ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
V V + + A L ENI V+EM+ + SW RD GPT VVN V
Sbjct: 63 VIVGVNPEDYAAAHYVLTGEENILVVEMTSDDSWIRDCGPTFVVNDDG--------DVRA 114
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLT 178
+ W+FN+WGG+ DG Y W D V K+ + R+ P S VLEGGSIHVDGEGT +T
Sbjct: 115 VHWHFNAWGGLVDGLYFPWDQDALVGLKVADLAGVDRYRPDSFVLEGGSIHVDGEGTVMT 174
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
TE CLL++ RNP L+K QIEN L YLGV K+IW+ G+
Sbjct: 175 TEMCLLSEGRNPELSKEQIENYLCEYLGVDKVIWIKDGI 213
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR ASY+NF I N ++ PQ+ D ++D A++ + + FP+ EVVG+ RE+V
Sbjct: 298 PRTTEDVCIASYMNFLIGNDFVLVPQY-DDEYDEMALQQVQEMFPEREVVGVP-TREVVY 355
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQQP
Sbjct: 356 GGGNIHCITQQQPV 369
>gi|430360277|ref|ZP_19426200.1| agmatine deiminase [Enterococcus faecalis OG1X]
gi|430368885|ref|ZP_19428432.1| agmatine deiminase [Enterococcus faecalis M7]
gi|429512969|gb|ELA02563.1| agmatine deiminase [Enterococcus faecalis OG1X]
gi|429516074|gb|ELA05571.1| agmatine deiminase [Enterococcus faecalis M7]
Length = 349
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 123/205 (60%), Gaps = 12/205 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MP E+EP + WM WP ER DNWRD Q F VA AIS+F P+ V S Q++N
Sbjct: 1 MPGEFEPQEKVWMIWP---ERPDNWRDGGKPVQEAFTNVAKAISQFTPMNVVVSQQQFQN 57
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
R QLP I V EMS N +W RD GP+ V+N ++ G+DW FN+WGG+ DG
Sbjct: 58 CRRQLPPEITVYEMSNNDAWVRDCGPSFVINDHG--------EIRGVDWTFNAWGGLVDG 109
Query: 134 CYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
Y W D VA+KI E + + VLEGGS HVDG+GT LTTE CLL++ RNP L
Sbjct: 110 LYFPWDQDDLVAQKICEIEHVDSYRTDDFVLEGGSFHVDGQGTVLTTEMCLLSEGRNPQL 169
Query: 193 TKGQIENELKAYLGVMKIIWLPRGL 217
+K IE +L YL V K++WL G+
Sbjct: 170 SKEAIEQKLCDYLNVEKVLWLGDGI 194
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 215 RGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKY 274
+G F + PR G ASY+NF I N G+I PQ+GD+ D A+ + FP
Sbjct: 264 KGSFKIDFVEGTMPREDGDICIASYMNFLITNDGVIVPQYGDEN-DRLALEQVQTMFPDK 322
Query: 275 EVVGIERAREIVLGGGNIHCITQQQP 300
++VG+ E+V GGGNIHCITQQ+P
Sbjct: 323 KIVGVNTV-EVVYGGGNIHCITQQEP 347
>gi|237807253|ref|YP_002891693.1| agmatine deiminase [Tolumonas auensis DSM 9187]
gi|237499514|gb|ACQ92107.1| agmatine deiminase [Tolumonas auensis DSM 9187]
Length = 364
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 131/222 (59%), Gaps = 11/222 (4%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ G P G+ MPAEW P WM WP R DNWR+ AQ FAKVA AI+ PV
Sbjct: 6 ITGLPKQDGFFMPAEWAPQQAVWMIWPFR---PDNWREAGKFAQATFAKVAAAIAGATPV 62
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A++ +P ++ ++ M + W RDTGPT+V+N + + GIDW
Sbjct: 63 YMAVPEQFMAQAKAIMPADVTLVVMESDDCWARDTGPTVVINGNG--------ECRGIDW 114
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG G Y W D VAR++L+ R+ ++LEGGSIHVDGEGTC+TT EC
Sbjct: 115 GFNAWGGHHGGLYFPWDKDELVARQMLAVHGFDRYEAPLILEGGSIHVDGEGTCMTTAEC 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLNKNRNPHL+K QIE+ L+ YL V IWL G++ DG
Sbjct: 175 LLNKNRNPHLSKAQIEDYLRDYLNVSTFIWLEEGVYMDETDG 216
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ DG PR AG RLA SYVNF I N ++ P D K D EA +L Q FP++ VVG+
Sbjct: 285 VVDGSGVPRDAGGRLAGSYVNFLITNDRVVYPLL-DPKTDDEAKVILQQIFPQHTVVGVP 343
Query: 281 RAREIVLGGGNIHCITQQQP 300
AREI+LGGGNIHCITQQ P
Sbjct: 344 -AREILLGGGNIHCITQQIP 362
>gi|298713561|emb|CBJ27089.1| agmatine deiminase [Ectocarpus siliculosus]
Length = 387
Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 103/223 (46%), Positives = 140/223 (62%), Gaps = 7/223 (3%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP L GY +PAEWE H + WM WPVR D W++ A AQ FA VA AI++FEPV
Sbjct: 11 LGSTPLLDGYHVPAEWETHERTWMLWPVRP---DTWKESARPAQLAFAAVAKAIARFEPV 67
Query: 63 TVCASAAQWENARSQL-PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAP---KVA 118
TV ++Q ++A+ L I + + + +W RDTGPT VV + + S + V
Sbjct: 68 TVGVPSSQLQSAQPLLDATGIGIAVIEQDDAWIRDTGPTFVVGGTRSESSERQRGMRNVR 127
Query: 119 GIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLT 178
G+DW+FN+WGG GC+ +W D +A +L R+ +MVLEGGS+HVDGEGT +T
Sbjct: 128 GVDWSFNAWGGEFGGCFSNWDKDDAIASTVLGLVGADRYKANMVLEGGSVHVDGEGTVIT 187
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMI 221
TEECLLN NRNP TK +IE L+ YLGV ++WL +G+ G +
Sbjct: 188 TEECLLNPNRNPTFTKSEIEKHLRDYLGVKLVLWLGQGVTGDV 230
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Query: 222 HDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIER 281
H ++ R G RLAASYVNFY+ANG +I P +G + D AVR+ +P+ EV+ ++
Sbjct: 305 HTLGSRERAQGDRLAASYVNFYLANGAVILPGYGVPE-DEAAVRLFKAIYPEREVIQVD- 362
Query: 282 AREIVLGGGNIHCITQQQP 300
R + LGGGNIHCITQQQP
Sbjct: 363 TRAVALGGGNIHCITQQQP 381
>gi|317490070|ref|ZP_07948559.1| agmatine deiminase [Eggerthella sp. 1_3_56FAA]
gi|316910775|gb|EFV32395.1| agmatine deiminase [Eggerthella sp. 1_3_56FAA]
Length = 371
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 129/219 (58%), Gaps = 14/219 (6%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
E TP GY MP E+EP WM WP R DNWRD A AQ+ +A VA I+++EP
Sbjct: 6 ENESTPKKDGYRMPGEFEPQECIWMLWP---HRPDNWRDGAKPAQKAYADVARGIAQYEP 62
Query: 62 VTVCASAAQWENARSQLP--ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
V V + + A L ENI V+EM+ + SW R+ GPT VVN V
Sbjct: 63 VIVGVNPEDYAAAHYVLTGEENILVVEMTSDDSWIRECGPTFVVNDDG--------DVRA 114
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLT 178
+ W+FN+WGG+ DG Y W D V K+ + R+ P S VLEGGSIHVDGEGT +T
Sbjct: 115 VHWHFNAWGGLVDGLYFPWDQDALVGLKVADLAGVDRYRPDSFVLEGGSIHVDGEGTVMT 174
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
TE CLL++ RNP L+K QIEN L YLGV K+IW+ G+
Sbjct: 175 TEMCLLSEGRNPELSKEQIENYLCEYLGVDKVIWIKDGI 213
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR ASY+NF I N ++ PQ+ D ++D A++ + + FP+ EVVG+ RE+V
Sbjct: 298 PRTTEDVCIASYMNFLIGNDFVLVPQY-DDEYDEMALQQVQEMFPEREVVGVP-TREVVY 355
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQQP
Sbjct: 356 GGGNIHCITQQQPV 369
>gi|322831647|ref|YP_004211674.1| agmatine deiminase [Rahnella sp. Y9602]
gi|384256761|ref|YP_005400695.1| agmatine deiminase [Rahnella aquatilis HX2]
gi|321166848|gb|ADW72547.1| agmatine deiminase [Rahnella sp. Y9602]
gi|380752737|gb|AFE57128.1| agmatine deiminase [Rahnella aquatilis HX2]
Length = 361
Score = 189 bits (481), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 131/218 (60%), Gaps = 11/218 (5%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
P G+ MPAEW WM WP R DNWR + AQ FA VA AI+ PV +
Sbjct: 8 PQAEGFAMPAEWAAQQAVWMIWPYR---TDNWRSNGRPAQLAFANVAAAIATKTPVFMAV 64
Query: 67 SAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
AA+ NAR +P I ++EM + +W RDTGPTIVVN Q ++A IDW FN+
Sbjct: 65 PAAEMANAREVMPAQITLVEMESDDAWMRDTGPTIVVNP-------QGERLA-IDWTFNA 116
Query: 127 WGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNK 186
WGG+ G Y W D +VAR++ + +P +VLEGGSIHVDGEGT LTT ECLLN
Sbjct: 117 WGGLHGGLYSSWERDQRVARQVANYHHIPYVSTDLVLEGGSIHVDGEGTLLTTAECLLNP 176
Query: 187 NRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
NRNP L+K +IE +L+ LGV + IWL G+F DG
Sbjct: 177 NRNPDLSKAEIEAKLRELLGVKQFIWLEDGVFNDETDG 214
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
Query: 224 GEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAR 283
G A R+ G RLAASYVN+ I+N II P D K D +A ++L + +P+Y++ GI AR
Sbjct: 286 GTAIERVEGNRLAASYVNYLISNNHIIFPLL-DAKTDKQAEKLLGEMYPEYKITGIP-AR 343
Query: 284 EIVLGGGNIHCITQQQPA 301
EI+LGGGNIHCITQQ PA
Sbjct: 344 EILLGGGNIHCITQQIPA 361
>gi|297624224|ref|YP_003705658.1| agmatine deiminase [Truepera radiovictrix DSM 17093]
gi|297165404|gb|ADI15115.1| Agmatine deiminase [Truepera radiovictrix DSM 17093]
Length = 361
Score = 189 bits (481), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 123/368 (33%), Positives = 169/368 (45%), Gaps = 92/368 (25%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDAL---HAQRV---FAKVATA 55
++ PA G+ MP EW PH+ W WP DDAL H V FA +
Sbjct: 7 DLTDRPAALGFAMPPEWTPHAATWTSWPF---------DDALWVGHLAAVREEFAALVAT 57
Query: 56 ISKFEPVTVCASAAQWENARSQLPE-------NIRVIEMSMNGSWFRDTGPTIVVNKSSA 108
+++FEPV + + E + E I + M +N WFRD GP + N
Sbjct: 58 VARFEPVILNVRDDEAEASARAALERAEAPMAQITLHRMPLNDVWFRDNGPLFIRNAKG- 116
Query: 109 SSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSI 168
+VA DW FN+WGG Y W D + +++ T + RF V+EGGS+
Sbjct: 117 -------EVALTDWRFNAWGG----KYAPWDEDDRAPQRVAKTLGMTRFAVPYVMEGGSL 165
Query: 169 HVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG--------- 219
++G+G CLTT CLL+ RNP LT+G+IE L+ LGV +++WLP GL G
Sbjct: 166 ELNGQGVCLTTRSCLLSPARNPELTQGEIETLLRDVLGVRQVVWLPGGLEGDHTDGHIDT 225
Query: 220 -------------------------MIH---------DGEAKP-------------RLAG 232
M H D E P L G
Sbjct: 226 IVRFTDDRTIVCAVEADEDDPNFATMAHNRALLEGLRDAEGNPYRVVPLPLPKTRLELEG 285
Query: 233 TRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNI 292
RL +Y NFYI NG ++ PQ+GD +G A+ VL FP EV+G+ +R ++ GGG+
Sbjct: 286 VRLPPTYANFYIGNGFVVVPQYGDPHDEG-ALEVLRPLFPGREVIGLP-SRALITGGGSF 343
Query: 293 HCITQQQP 300
HC+TQQQP
Sbjct: 344 HCVTQQQP 351
>gi|302537123|ref|ZP_07289465.1| agmatine deiminase [Streptomyces sp. C]
gi|302446018|gb|EFL17834.1| agmatine deiminase [Streptomyces sp. C]
Length = 340
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/351 (33%), Positives = 169/351 (48%), Gaps = 73/351 (20%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQ 70
G+ MPAEW PH + WM WP N ++ A A++ + VA A+ +EPVT+ S
Sbjct: 4 GFRMPAEWTPHERTWMAWPSPNPTFTNEQELA-EARQAWGAVARAVRAYEPVTLVVSPGD 62
Query: 71 WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
E+AR+ + ++++++E ++ +W RD GPT V N A ++A +DW FN WG
Sbjct: 63 AESARAIVGDDVQLVEQELDDAWMRDIGPTFVTND--------AGELAAVDWTFNGWGAQ 114
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
+ + W D ++AR I + +V EGG+IHVDGEGT L T+ L + RNP
Sbjct: 115 E---WARWDHDSKIARHISDVVGTRTYSTRLVNEGGAIHVDGEGTVLLTDTVQLGEGRNP 171
Query: 191 HLTKGQIENELKAYLGVMKIIWLPRGLFG-----------------------MIH----- 222
T+ Q+E E+ A+LG K IWLP GL G M+H
Sbjct: 172 GWTRQQVEEEIHAHLGTTKAIWLPYGLAGDYGTYGTQGHVDIVAAFARPGVVMVHTQPDP 231
Query: 223 -----------------DGEAKPRLA--------------GTRLAASYVNFYIANGGIIT 251
+AK RL G + SY+N Y+ NGG++
Sbjct: 232 AHPDHERCKTIAALLRASTDAKGRLLEVVEVPAPTVLEEDGEWVDYSYINHYLCNGGVVL 291
Query: 252 PQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
F D + D EA + FP+ V ++ AR I GGG IHCITQQQP +
Sbjct: 292 CAFDDPR-DEEAAEIFRGLFPERTVTLVD-ARTIFAGGGGIHCITQQQPKV 340
>gi|171911242|ref|ZP_02926712.1| Agmatine deiminase [Verrucomicrobium spinosum DSM 4136]
Length = 353
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/355 (34%), Positives = 166/355 (46%), Gaps = 82/355 (23%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
Y MPAEW P W+ WP + +AL A+ F ++A+AI+KFEPV + A A W
Sbjct: 14 YYMPAEWAPQEAVWLSWPANRDSAPE-THEALQAK--FGEIASAITKFEPVRINA-AGDW 69
Query: 72 EN-------ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
A+ + + E N W RD GP V +K + K+A DW F
Sbjct: 70 HKRIWAAIEAQKGDMSKVELYEHPTNDVWCRDHGPIFVKHKETG-------KLALTDWQF 122
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL 184
N+WGG + W+LD +V ++ LPRF SM+LEGGSI V+GEG LTTE LL
Sbjct: 123 NAWGG----KFPPWNLDNEVPERVAKALDLPRFASSMILEGGSIEVNGEGVLLTTEAVLL 178
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG-------------------- 224
NKNRN ++ +IE E+K +LG+ I WL G+ G DG
Sbjct: 179 NKNRNHEWSRKEIEAEIKRHLGISSIFWLREGIEGDDTDGHIDDITRFIREDVVLTMVEK 238
Query: 225 -----------EAKPRLAGTR----------------------------LAASYVNFYIA 245
E + +LA R L SY NF I
Sbjct: 239 RQSDANYKILEENREKLADLRTTKGGKVEVLTLEMPEPLVPKAGWRLDRLPGSYANFLIV 298
Query: 246 NGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
NGG++ P F K D A+ + + FP EV+GIE + +IV GG +HCI+QQQP
Sbjct: 299 NGGVLVPVFDQGKRDDHALGFIRECFPGREVIGIE-SSDIVFEGGALHCISQQQP 352
>gi|331700698|ref|YP_004397657.1| Agmatine deiminase [Lactobacillus buchneri NRRL B-30929]
gi|329128041|gb|AEB72594.1| Agmatine deiminase [Lactobacillus buchneri NRRL B-30929]
Length = 362
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 126/213 (59%), Gaps = 11/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP Y + EW H Q +M WP ER DNWRD A AQ+VF++VA IS++EP+T+
Sbjct: 7 TPQEDKYNVAPEWHQHQQAYMMWP---ERTDNWRDGAKPAQKVFSEVAAKISRYEPLTML 63
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S Q+E+A LPE++RV+EMS N +W RD GPT +VN + V + W FN
Sbjct: 64 VSRQQYEHALHALPESVRVVEMSYNDAWMRDVGPTYLVNAQN--------NVRAVSWQFN 115
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WGG+ DG Y W D V+ K+ +R+ + VLEG + DGEGT + TEE +L+
Sbjct: 116 AWGGLVDGLYFPWDQDNLVSGKVSDLDRIDYYEADFVLEGSAYQTDGEGTLIATEESVLS 175
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
+ RN + + +E K YL V KIIWL RG F
Sbjct: 176 EGRNGQVNQADVEAVFKRYLNVTKIIWLARGYF 208
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G RL A+Y+N Y+ NG +I P FGD+ D A+ ++ FP ++ + ARE++L
Sbjct: 291 PRYEGDRLMATYINCYLVNGAVILPIFGDEH-DQAAIDQYTKIFPDRKIEPV-YARELLL 348
Query: 288 GGGNIHCITQQQP 300
GGG+IH I P
Sbjct: 349 GGGDIHSIVLGVP 361
>gi|122090586|emb|CAL13455.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 348
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 125/211 (59%), Gaps = 11/211 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAEW WM WP R DNWR + AQ+ FAKVA AIS+ PV + A
Sbjct: 1 MPAEWAKQDAVWMLWPYRQ---DNWRGKGIPAQQTFAKVAEAISRTTPVFMGVPAEFMAQ 57
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
A++ LP ++ ++EM+ + +W RDTGPT+V+N + +DW FN+WGG++ G
Sbjct: 58 AKATLPASVTLVEMASDDAWMRDTGPTMVINGAGERRA--------VDWQFNAWGGLNGG 109
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
Y +W D ++A ++ + +VLEGGSIH DGEGT LTT ECLLN NRNPHL
Sbjct: 110 LYANWQQDEKIAVQVSDFLNNAHYSAPLVLEGGSIHTDGEGTLLTTAECLLNPNRNPHLN 169
Query: 194 KGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
+ QIE L+ YLGV IWL G++ DG
Sbjct: 170 QVQIEQLLREYLGVTHFIWLQDGVYNDETDG 200
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 225 EAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERARE 284
+A PR AG RLA SYVNF I+N II P D DG A +L Q FP Y +VG+ ARE
Sbjct: 273 DAVPRTAGERLAGSYVNFLISNQQIIYPLL-DSSTDGLAHDLLQQIFPGYAIVGVP-ARE 330
Query: 285 IVLGGGNIHCITQQQPA 301
I+LGGGNIHCITQQ PA
Sbjct: 331 ILLGGGNIHCITQQIPA 347
>gi|254373954|ref|ZP_04989436.1| conserved hypothetical protein [Francisella novicida GA99-3548]
gi|151571674|gb|EDN37328.1| conserved hypothetical protein [Francisella novicida GA99-3548]
Length = 328
Score = 186 bits (473), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 168/342 (49%), Gaps = 71/342 (20%)
Query: 13 LMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWE 72
L PAEWE HS WM WP R +D W + A ++AKVA AI+K+EPV + + Q +
Sbjct: 3 LWPAEWEEHSATWMIWPAR---IDMWPN-ITKAYEIYAKVANAIAKYEPVNMVVNQHQLD 58
Query: 73 NARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDD 132
A++ L +NI +I +++ SW RD P +A K+ +++FN WG
Sbjct: 59 IAKNYLGKNITLISQAVDDSWARDVMPIF---------SFKADKLIANNFDFNCWGNK-- 107
Query: 133 GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
+ + D ++ I ++ M+LEGG++H +G+G LTTEECLLN NRN ++
Sbjct: 108 --FSPFDNDRRLKNDIAKQQKWQVNSSKMILEGGAVHSNGQGVLLTTEECLLNLNRNRNM 165
Query: 193 TKGQIENELKAYLGVMKIIWLPRGLFGMIH-DGEA------------------------- 226
K QIE+EL + LGV KI+WLP G+ G DG
Sbjct: 166 QKEQIESELISILGVKKILWLPYGVAGDFDTDGHVDNVACFANKNTIIIQSCYDENDENF 225
Query: 227 -----------------------KPR---LAGTRLAASYVNFYIANGGIITPQFGDKKWD 260
+PR AG RLA SY+NFYI N II P FGD D
Sbjct: 226 ARHQANMTYLDKYASEFNIVEIPQPRAQYFAGERLALSYLNFYIVNNAIIMPAFGDPN-D 284
Query: 261 GEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
A +L + F + + ++V+GGG IHCIT QQPAI
Sbjct: 285 VIAFEILQKCFKDRSIEQL-NIIDLVIGGGGIHCITMQQPAI 325
>gi|391232204|ref|ZP_10268410.1| peptidylarginine deiminase-like enzyme [Opitutaceae bacterium TAV1]
gi|391221865|gb|EIQ00286.1| peptidylarginine deiminase-like enzyme [Opitutaceae bacterium TAV1]
Length = 374
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 127/360 (35%), Positives = 171/360 (47%), Gaps = 77/360 (21%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
GTPA G+ MPAEW P + W+ WP +YE +W +F+++ TAIS+ E V
Sbjct: 30 TGTPAALGFRMPAEWAPQTAVWLSWPHKYE---SWPGKFRPVPYLFSRIVTAISQREEVR 86
Query: 64 V-CASAAQWENARSQLPE-----NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKV 117
+ CA+ Q A+ + + N +W RD GP V ++ Q +V
Sbjct: 87 INCAARLQARAAKLCAKAGADMARVTFYDHPTNDAWCRDHGPIFVKHR-------QTGEV 139
Query: 118 AGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTC 176
A DW +N+WG Y + LD ++ I L RF + MVLEGGSI V+GEG
Sbjct: 140 ALTDWAYNAWGDK----YPPYDLDNEIPPSIGRALGLRRFGKNDMVLEGGSIDVNGEGLL 195
Query: 177 LTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEA-------KP- 228
LT+E+CLLNKNRNPHLTK QIE L+ YLGV +I+W+ G+ G DG KP
Sbjct: 196 LTSEQCLLNKNRNPHLTKEQIEQNLRDYLGVTQILWVGDGIVGDDTDGHIDDMTRFYKPD 255
Query: 229 -----------------------RLAGTRLAA------------------------SYVN 241
RL R A SY N
Sbjct: 256 GFITCVEPATHDKNHAILAENLERLKSFRTPAGGKFDIVELPMPRPFGFQRQRVPASYAN 315
Query: 242 FYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
F I NG ++ P F K D EA ++++ FP EVV I+ ++ G G +HCI+QQQPA
Sbjct: 316 FLIINGAVLVPTFRQNKRDREACQIIASCFPDREVVPID-CYHLIWGLGTLHCISQQQPA 374
>gi|196230937|ref|ZP_03129797.1| Agmatine deiminase [Chthoniobacter flavus Ellin428]
gi|196224767|gb|EDY19277.1| Agmatine deiminase [Chthoniobacter flavus Ellin428]
Length = 359
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 129/364 (35%), Positives = 173/364 (47%), Gaps = 81/364 (22%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLD--NWRDDALHAQRVFAKVATAISKFEP 61
TPA GY MPAEWEPH W+ WP R D ++ D A++ A+ + E
Sbjct: 12 TSTPAAQGYHMPAEWEPHEATWLSWP----RPDGISFPDSYEKVVPTLAQMVHALGESEK 67
Query: 62 VTVCASAAQWEN-ARSQLP------ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQA 114
V + A+ E RS L +++ + N W RD GP + A+A
Sbjct: 68 VNINVCDAEHEALVRSHLAKVRAKTDHVTFYHIPTNEPWCRDHGPIYLTR-------AEA 120
Query: 115 PKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEG 174
P++A +DW++N+WG Y + D V ++I ++LP F MVLEGGSI V+G G
Sbjct: 121 PRLAIVDWDYNAWGWK----YPPFDFDDDVPKRIAEFQKLPIFFPKMVLEGGSIDVNGAG 176
Query: 175 TCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG--------------- 219
T LTT+ CLLN NRNP L++ IE L+ Y+GV I+WL G+ G
Sbjct: 177 TLLTTKSCLLNPNRNPDLSEKDIEQRLRDYIGVKHILWLGDGIEGDDTDGHVDDLTRFVG 236
Query: 220 -------------------------MIHDGEAK------------PRLA---GTRLAASY 239
+H EA+ PR G RL ASY
Sbjct: 237 RTTVVTVVEEDENDSNYEPLRQNLDALHTMEAEDGTPLEVVTLPMPRKIVRDGQRLPASY 296
Query: 240 VNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQ 299
NFYI N I+ P F D D AV VL +AFPK +VV I+ RE++ G G HC+TQQQ
Sbjct: 297 ANFYIGNKVILLPVFADAH-DKWAVAVLQKAFPKRKVVPID-CRELIWGLGAFHCLTQQQ 354
Query: 300 PAIP 303
P +P
Sbjct: 355 PLLP 358
>gi|406026206|ref|YP_006725038.1| agmatine deiminase [Lactobacillus buchneri CD034]
gi|405124695|gb|AFR99455.1| agmatine deiminase [Lactobacillus buchneri CD034]
Length = 362
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 126/213 (59%), Gaps = 11/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP Y + EW H Q +M WP ER DNWR+ A AQ+VF++VA IS++EP+T+
Sbjct: 7 TPQEDKYNVVPEWRQHQQAYMMWP---ERTDNWREGAKPAQKVFSEVAAKISRYEPLTML 63
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
S Q+E+A LPE++RV+EMS N +W RD GPT +VN + V + W FN
Sbjct: 64 VSRQQYEHALHALPESVRVVEMSYNDAWMRDVGPTYLVNAQN--------NVRAVSWQFN 115
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WGG+ DG Y W D V+ K+ +R+ + VLEG + DGEGT + TEE +L+
Sbjct: 116 AWGGLVDGLYFPWDQDNLVSGKVSDLDRIDYYDADFVLEGSAYQTDGEGTLIATEESVLS 175
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
+ RN + + +E K YL V KIIWL RG F
Sbjct: 176 EGRNGQVDQADVEAVFKRYLNVTKIIWLSRGYF 208
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G RL A+Y+N Y+ANG +I P FGD+ D A+ ++ FP ++ + ARE++L
Sbjct: 291 PRYEGDRLMATYINCYLANGAVILPIFGDEH-DQAAIDQYTKIFPDRKIEPV-YARELLL 348
Query: 288 GGGNIHCITQQQP 300
GGG+IH I P
Sbjct: 349 GGGDIHSIVLGVP 361
>gi|227508413|ref|ZP_03938462.1| agmatine deiminase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
gi|227192063|gb|EEI72130.1| agmatine deiminase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
Length = 362
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 126/215 (58%), Gaps = 11/215 (5%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N P GY + EW H Q +M WP +R DNWR+ A AQ+ FA+VA +S++EPVT
Sbjct: 5 NSNPQKDGYYLAPEWHQHQQSYMMWP---QRSDNWREGAKPAQKTFAEVAIKVSQYEPVT 61
Query: 64 VCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWN 123
+ S +Q+++AR LPE+IRVIEMS N +W RD GP ++N +V ++W
Sbjct: 62 MLVSQSQYQHARDVLPESIRVIEMSYNDAWMRDIGPAYLINHHD--------QVRTVNWQ 113
Query: 124 FNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECL 183
FN+WGG+ DG Y W D VA+K+ +R + VLEG DGEGT + EE +
Sbjct: 114 FNAWGGLIDGLYFPWDQDNLVAKKVTDLDRFDYYDVDFVLEGCGYQTDGEGTLMAVEESV 173
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
L++ RN + + +E LK L V KIIWL +G F
Sbjct: 174 LSEGRNGEVKRADVEEILKKDLNVSKIIWLEQGYF 208
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR AG RL ASY+N Y+AN +I P FGD+ D EA+ + FP ++ + ARE++L
Sbjct: 291 PRYAGDRLTASYINCYLANNAVILPIFGDQH-DQEAIDQYQKLFPDRKIEPV-YARELLL 348
Query: 288 GGGNIHCIT 296
GGGNIH I
Sbjct: 349 GGGNIHSIV 357
>gi|227511420|ref|ZP_03941469.1| agmatine deiminase [Lactobacillus buchneri ATCC 11577]
gi|227085371|gb|EEI20683.1| agmatine deiminase [Lactobacillus buchneri ATCC 11577]
Length = 362
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 126/215 (58%), Gaps = 11/215 (5%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N P GY + EW H Q +M WP +R DNWR+ A AQ+ FA+VA +S++EPVT
Sbjct: 5 NSNPQKDGYYLAPEWHQHQQSYMMWP---QRSDNWREGAKPAQKTFAEVAIKVSQYEPVT 61
Query: 64 VCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWN 123
+ S +Q+++AR LPE+IRVIEMS N +W RD GP ++N +V ++W
Sbjct: 62 MLVSQSQYQHARDVLPESIRVIEMSYNDAWMRDIGPAYLINHHD--------QVRTVNWQ 113
Query: 124 FNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECL 183
FN+WGG+ DG Y W D VA+K+ +R + VLEG DGEGT + EE +
Sbjct: 114 FNAWGGLIDGLYFPWDQDNLVAKKVTDLDRFDYYDVDFVLEGCGYQTDGEGTLMAVEESV 173
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
L++ RN + + +E LK L V KIIWL +G F
Sbjct: 174 LSEGRNGEVKRSDVEEILKKDLNVSKIIWLEQGYF 208
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR AG RL ASY+N Y+AN +I P FGD+ D EA+ + FP ++ + ARE++L
Sbjct: 291 PRYAGDRLTASYINCYLANNAVILPIFGDQH-DQEAIDQYRKLFPDRKIEPV-YARELLL 348
Query: 288 GGGNIHCIT 296
GGGNIH I
Sbjct: 349 GGGNIHSIV 357
>gi|373849725|ref|ZP_09592526.1| Agmatine deiminase [Opitutaceae bacterium TAV5]
gi|372475890|gb|EHP35899.1| Agmatine deiminase [Opitutaceae bacterium TAV5]
Length = 374
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/360 (35%), Positives = 170/360 (47%), Gaps = 77/360 (21%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
GTPA G+ MPAEW P + W+ WP +YE +W +F+++ TAIS+ E V
Sbjct: 30 TGTPAALGFRMPAEWAPQTAVWLSWPHKYE---SWPGKFRPVPYLFSRIVTAISQREEVR 86
Query: 64 V-CASAAQWENARSQLPE-----NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKV 117
+ CA+ Q A+ + + N +W RD GP V + Q +V
Sbjct: 87 INCAARLQARAAKLCAKAGADMARVTFYDHPTNDAWCRDHGPIFVKH-------TQTGEV 139
Query: 118 AGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTC 176
A DW +N+WG Y + LD ++ I L RF + MVLEGGSI V+GEG
Sbjct: 140 ALTDWAYNAWGDK----YPPYDLDNEIPPSIGRALGLRRFEKNDMVLEGGSIDVNGEGLL 195
Query: 177 LTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEA-------KP- 228
LT+E+CLLNKNRNPHLTK QIE L+ YLGV +I+W+ G+ G DG KP
Sbjct: 196 LTSEQCLLNKNRNPHLTKEQIEQNLRDYLGVTQILWVGDGIVGDDTDGHIDDMTRFYKPD 255
Query: 229 -----------------------RLAGTRLAA------------------------SYVN 241
RL R A SY N
Sbjct: 256 GFITCVEPATHDKNHAILAENLERLKSFRTPAGGKFDIVELPMPRPFGFQRQRVPASYAN 315
Query: 242 FYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
F I NG ++ P F K D EA ++++ FP EVV I+ ++ G G +HCI+QQQPA
Sbjct: 316 FLIINGAVLVPTFRQNKRDREACQIIASCFPDREVVPID-CYHLIWGLGTLHCISQQQPA 374
>gi|255520672|ref|ZP_05387909.1| agmatine deiminase [Listeria monocytogenes FSL J1-175]
Length = 182
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 124/191 (64%), Gaps = 12/191 (6%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++ G P G+ MP E+EPH C+M WP ER DNWR AQ+ + +VA AIS FEP
Sbjct: 3 QLKGLPVEDGFRMPGEYEPHIGCFMIWP---ERPDNWRLGGKPAQQNYKEVAVAISNFEP 59
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VT+ S Q++NAR +LP+ IRVIEMS + +W RD GP+ +VN ++ G+D
Sbjct: 60 VTMFVSPNQYKNARKELPDTIRVIEMSNDDAWIRDYGPSFLVNDKG--------EMRGVD 111
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTE 180
W FN+WGG+ DG Y W D Q+A+K+ ERL + +LEG SIHVDGEGT +TTE
Sbjct: 112 WGFNAWGGLLDGLYFPWDKDNQIAKKVCDLERLDYYSQKDFILEGCSIHVDGEGTLVTTE 171
Query: 181 ECLLNKNRNPH 191
ECLL++ RNP+
Sbjct: 172 ECLLSEGRNPN 182
>gi|383188895|ref|YP_005199023.1| agmatine deiminase [Rahnella aquatilis CIP 78.65 = ATCC 33071]
gi|371587153|gb|AEX50883.1| agmatine deiminase [Rahnella aquatilis CIP 78.65 = ATCC 33071]
Length = 361
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 128/218 (58%), Gaps = 11/218 (5%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
P G++MPAEW WM WP R DNWR AQ FA VA AI+ PV +
Sbjct: 8 PQAEGFVMPAEWASQQAVWMIWPYR---TDNWRSSGRPAQLAFANVAAAIATKTPVFMAV 64
Query: 67 SAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
AA+ NA +P I ++EM + +W RDTGPTIVVN Q ++A IDW FN+
Sbjct: 65 PAAEMANACEVMPAQITLVEMESDDAWMRDTGPTIVVNP-------QGERLA-IDWTFNA 116
Query: 127 WGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNK 186
WGG G Y W D VAR++ + +P +VLEGGSIHVDGEGT LTT ECLLN
Sbjct: 117 WGGFHGGLYSSWERDQLVARQVANYHHIPYLSTDLVLEGGSIHVDGEGTLLTTAECLLNP 176
Query: 187 NRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
NRNP L+K +IE +L+ LGV + IWL G+F DG
Sbjct: 177 NRNPDLSKAEIEAKLRELLGVKQFIWLEEGVFNDETDG 214
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 224 GEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAR 283
G A R+ G RLAASYVN+ I+N II P D D +A ++L + +P Y++ GI AR
Sbjct: 286 GTAIERVEGNRLAASYVNYLISNNHIIFPLL-DATTDKQAEKLLGEMYPDYKITGIP-AR 343
Query: 284 EIVLGGGNIHCITQQQPA 301
EI+LGGGNIHCITQQ PA
Sbjct: 344 EILLGGGNIHCITQQIPA 361
>gi|254372492|ref|ZP_04987981.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570219|gb|EDN35873.1| conserved hypothetical protein [Francisella novicida GA99-3549]
Length = 328
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 166/342 (48%), Gaps = 71/342 (20%)
Query: 13 LMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWE 72
L PAEWE HS WM WP R +D W + A ++AKVA I+K+EPV + + Q +
Sbjct: 3 LWPAEWEEHSATWMIWPAR---IDMWPN-ITKAYEIYAKVANTIAKYEPVNMVVNQHQLD 58
Query: 73 NARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDD 132
A++ L +NI +I +++ SW RD P +A K+ +++FN WG
Sbjct: 59 IAKNYLGKNITLISEAVDDSWARDVMPIF---------SFKADKLLANNFDFNCWGNK-- 107
Query: 133 GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
+ + D ++ I ++ M+LEGG++H +G+G LTTEECLLN NRNP++
Sbjct: 108 --FSPFDNDRRLKNDIAKQQKWQVNSSKMILEGGAVHSNGQGVLLTTEECLLNLNRNPNM 165
Query: 193 TKGQIENELKAYLGVMKIIWLPRGLFGMIH-DGEA------------------------- 226
K QIE+EL + LGV KI+WLP G+ G DG
Sbjct: 166 QKEQIESELISILGVKKILWLPYGVAGDFDTDGHVDNVACFANKNTIIIQSCYDENDENF 225
Query: 227 -----------------------KPR---LAGTRLAASYVNFYIANGGIITPQFGDKKWD 260
+PR AG RLA SY+NFYI N II P F D D
Sbjct: 226 ARHQANMTYLDKYASEFNIVEIPQPRAQYFAGERLALSYLNFYIVNNAIIMPAFDDPN-D 284
Query: 261 GEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
A +L + F + + ++V+ GG IHCIT QQPAI
Sbjct: 285 AAAFEILQKCFKDRSIEQL-NIIDLVVSGGGIHCITMQQPAI 325
>gi|62260419|gb|AAX77905.1| unknown protein [synthetic construct]
Length = 363
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 168/346 (48%), Gaps = 71/346 (20%)
Query: 9 LHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASA 68
L L PAEWE HS WM WP R +D W + A ++AKVA I+K+EPV + +
Sbjct: 25 LEMLLWPAEWEEHSATWMIWPAR---IDMWPN-ITKAYEIYAKVANTIAKYEPVNMVVNQ 80
Query: 69 AQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWG 128
Q + A+ L +N+ +I +++ SW RD P +A K+ +++FN WG
Sbjct: 81 HQLDIAKKYLGKNMTLISEAVDDSWARDIMPIF---------SFKADKLIANNFDFNCWG 131
Query: 129 GVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNR 188
+ + D ++ I ++ M+LEGG++H +G+G LTT+ECLLN NR
Sbjct: 132 NK----FSPFDNDRRLKNDIAKQQKWQVNSSKMILEGGAVHSNGQGVLLTTKECLLNLNR 187
Query: 189 NPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIH-DGEA--------------------- 226
NP++ K QIE+EL + LGV KI+WLP G+ G DG
Sbjct: 188 NPNMQKEQIESELISILGVKKILWLPYGVAGDFDTDGRVDNVACFANKNTIIIQSCYDEN 247
Query: 227 ---------------------------KPR---LAGTRLAASYVNFYIANGGIITPQFGD 256
+PR AG RLA SY+NFYI N II P FGD
Sbjct: 248 DENFARHQANMTYLDKYASEFNIVEIPQPRAQYFAGERLALSYLNFYIVNNAIIMPAFGD 307
Query: 257 KKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
D A +L + F + + ++V+GGG IHCIT QQPAI
Sbjct: 308 PN-DVIAFEILQKCFKDRSIEQL-NIIDLVIGGGGIHCITMQQPAI 351
>gi|227523620|ref|ZP_03953669.1| agmatine deiminase [Lactobacillus hilgardii ATCC 8290]
gi|227089192|gb|EEI24504.1| agmatine deiminase [Lactobacillus hilgardii ATCC 8290]
Length = 362
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 126/215 (58%), Gaps = 11/215 (5%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N P GY + EW H Q +M WP +R DNWR+ A AQ+ FA+VA +S++EPVT
Sbjct: 5 NSNPQKDGYYLAPEWHQHQQSYMMWP---QRSDNWREGAKPAQKTFAEVAIKVSQYEPVT 61
Query: 64 VCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWN 123
+ S +Q+++AR LPE+IRVIEMS N +W RD GP ++N +V ++W
Sbjct: 62 MLVSHSQYQHARDVLPESIRVIEMSYNDAWMRDIGPAYLINHHD--------QVRTVNWQ 113
Query: 124 FNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECL 183
FN+WGG+ DG Y W D VA+K+ +R + VLEG DGEGT + EE +
Sbjct: 114 FNAWGGLIDGLYFPWDQDNLVAKKVTDLDRFDYYDVDFVLEGCGYQTDGEGTLMAVEESV 173
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
L++ RN + + +E LK L V KIIWL +G F
Sbjct: 174 LSEGRNGEVKRSDVEEILKKDLNVSKIIWLEQGYF 208
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR AG RL ASY+N Y+AN +I P FGD+ D EA+ + FP ++ + ARE++L
Sbjct: 291 PRYAGDRLTASYINCYLANNAVILPIFGDQH-DQEAIDQYRKLFPDRKIEPV-YARELLL 348
Query: 288 GGGNIHCIT 296
GGGNIH I
Sbjct: 349 GGGNIHSIV 357
>gi|345303424|ref|YP_004825326.1| Agmatine deiminase [Rhodothermus marinus SG0.5JP17-172]
gi|345112657|gb|AEN73489.1| Agmatine deiminase [Rhodothermus marinus SG0.5JP17-172]
Length = 334
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/350 (34%), Positives = 162/350 (46%), Gaps = 77/350 (22%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MP EW PH W+ WP E W D+ +R A+V +S E V + + A E
Sbjct: 1 MPPEWAPHRATWLSWPHNRE---TWPDELAQVERTMAEVVRLLSHSEAVYINVNDAAHER 57
Query: 74 ARSQLPEN------IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSW 127
QL + +R + + +W RD G VV+ Q +A W FNSW
Sbjct: 58 HVRQLLDEAGVSGPVRFFHIPTDDAWIRDHGAIFVVHP-------QRRVLAATVWGFNSW 110
Query: 128 GGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
GG Y W D QVAR++ ++P F M+LEGGSI +G GT LTTE+CLLN N
Sbjct: 111 GG----KYPPWDRDAQVARRMAEALQVPIFDGGMILEGGSIDTNGAGTLLTTEQCLLNPN 166
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG------------------EAKP- 228
RNPHL + IE LK +LGV +++WL RGL G DG E P
Sbjct: 167 RNPHLDRAAIEQRLKDFLGVRQVLWLGRGLEGDDTDGHVDDLTRFVAEDVVVTAVETNPH 226
Query: 229 ------------RLAGTRL------------------------AASYVNFYIANGGIITP 252
RL RL A+Y NFYIANG ++ P
Sbjct: 227 DPNYDVLQENLERLRAFRLPDGRPLQIIELPMPEPLEIAGERVPATYANFYIANGLVLMP 286
Query: 253 QFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
+GD + D A +L + FP+ VV ++ R I+ G G +HC+TQQ PA+
Sbjct: 287 AYGDAR-DETAREILQRCFPERTVVPVD-CRAIIRGLGALHCLTQQVPAV 334
>gi|256822351|ref|YP_003146314.1| Agmatine deiminase [Kangiella koreensis DSM 16069]
gi|256795890|gb|ACV26546.1| Agmatine deiminase [Kangiella koreensis DSM 16069]
Length = 327
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/337 (34%), Positives = 162/337 (48%), Gaps = 67/337 (19%)
Query: 15 PAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENA 74
PAEWE H+ WM WP R E W + AQ FA+VA I+ +EP+ + A
Sbjct: 9 PAEWEAHAATWMAWPCRTEI---WTNGLEKAQLAFAEVANTIADYEPLFMLVKPEHKAFA 65
Query: 75 RSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGC 134
+L +I ++EM+++ SW RDT P + A+ K +D+ FN+WG
Sbjct: 66 TKKLSSSITLVEMTIDDSWTRDTAPIWI---------AEDGKPLALDFQFNAWGNK---- 112
Query: 135 YRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTK 194
+ + D +VA I++ + MVLEGG++H +G+GT LTT+ECLLN NRNP + +
Sbjct: 113 FSPFDNDAKVADNIINYSGIQSRQIDMVLEGGAVHSNGQGTILTTKECLLNANRNPSMNQ 172
Query: 195 GQIENELKAYLGVMKIIWLPRGLFG----------------------------------- 219
QIE L G +++WL +G+ G
Sbjct: 173 QQIEQVLLEQFGAEQVVWLEKGVAGDVDTDGHIDNIACFVEEDLVISQNCDKQSENFAIY 232
Query: 220 -------------MIHDGEAKPRLAGT-RLAASYVNFYIANGGIITPQFGDKKWDGEAVR 265
++ E + R G R+ SY+NFYIAN II P F D K D EA
Sbjct: 233 EENRQILRENNLKLVEVSEPEARYEGELRVPLSYINFYIANDAIIMPSF-DCKQDDEAKS 291
Query: 266 VLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
VL+ FP + I A EI++GGG IHCIT QQP I
Sbjct: 292 VLTDLFPHRTIHQI-NANEILVGGGGIHCITMQQPQI 327
>gi|134302486|ref|YP_001122456.1| peptidyl-arginine deiminase [Francisella tularensis subsp.
tularensis WY96-3418]
gi|421752361|ref|ZP_16189389.1| peptidyl-arginine deiminase [Francisella tularensis subsp.
tularensis AS_713]
gi|421754226|ref|ZP_16191204.1| peptidyl-arginine deiminase [Francisella tularensis subsp.
tularensis 831]
gi|421757952|ref|ZP_16194817.1| peptidyl-arginine deiminase [Francisella tularensis subsp.
tularensis 80700103]
gi|421759787|ref|ZP_16196614.1| peptidyl-arginine deiminase [Francisella tularensis subsp.
tularensis 70102010]
gi|424675107|ref|ZP_18112019.1| peptidyl-arginine deiminase [Francisella tularensis subsp.
tularensis 70001275]
gi|134050263|gb|ABO47334.1| porphyromonas-type peptidyl-arginine deiminase [Francisella
tularensis subsp. tularensis WY96-3418]
gi|409085076|gb|EKM85228.1| peptidyl-arginine deiminase [Francisella tularensis subsp.
tularensis 831]
gi|409085344|gb|EKM85488.1| peptidyl-arginine deiminase [Francisella tularensis subsp.
tularensis AS_713]
gi|409090166|gb|EKM90189.1| peptidyl-arginine deiminase [Francisella tularensis subsp.
tularensis 70102010]
gi|409091337|gb|EKM91337.1| peptidyl-arginine deiminase [Francisella tularensis subsp.
tularensis 80700103]
gi|417434362|gb|EKT89321.1| peptidyl-arginine deiminase [Francisella tularensis subsp.
tularensis 70001275]
Length = 328
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 168/342 (49%), Gaps = 71/342 (20%)
Query: 13 LMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWE 72
L PAEWE HS WM WP R +D W + A ++AKVA I+K+EPV + + Q +
Sbjct: 3 LWPAEWEEHSATWMIWPAR---IDMWPN-ITKAYEIYAKVANTIAKYEPVNMVVNQHQLD 58
Query: 73 NARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDD 132
A++ L +N+ +I +++ SW RD P +A K+ +++FN WG
Sbjct: 59 IAKNYLGKNMTLISEAVDDSWARDIMPIF---------SFKADKLIANNFDFNCWGNK-- 107
Query: 133 GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
+ + D ++ I ++ M+LEGG++H +G+G LTT+ECLLN NRNP++
Sbjct: 108 --FSPFDNDRRLKNDIAKQQKWQVNSSKMILEGGAVHSNGQGVLLTTKECLLNLNRNPNM 165
Query: 193 TKGQIENELKAYLGVMKIIWLPRGLFGMIH-DGEA------------------------- 226
K QIE+EL + LGV KI+WLP G+ G DG
Sbjct: 166 QKEQIESELISILGVKKILWLPYGVAGDFDTDGHVDNVACFANKNTIIIQSCYDENDENF 225
Query: 227 -----------------------KPR---LAGTRLAASYVNFYIANGGIITPQFGDKKWD 260
+PR AG RLA SY+NFYI N II P FGD D
Sbjct: 226 ARHQANMTYLDKYASEFNIVEIPQPRAKYFAGERLALSYLNFYIVNNAIIMPAFGDPN-D 284
Query: 261 GEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
A +L + F + + ++V+GGG IHCIT QQPAI
Sbjct: 285 VIAFEILQKCFKDRSIEQL-NIIDLVIGGGGIHCITMQQPAI 325
>gi|387824075|ref|YP_005823546.1| Agmatine deiminase [Francisella cf. novicida 3523]
gi|328675674|gb|AEB28349.1| Agmatine deiminase [Francisella cf. novicida 3523]
Length = 328
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 164/342 (47%), Gaps = 71/342 (20%)
Query: 13 LMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWE 72
L PAEWE HS WM WP R N A V+AKVA AI+K+EPV + + Q +
Sbjct: 3 LWPAEWEEHSATWMIWPARIAMWPN----ITKAYEVYAKVANAIAKYEPVNMVVNQHQLD 58
Query: 73 NARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDD 132
A++ L +NI +I +++ SW RD P +A K+ +++FN WG
Sbjct: 59 IAKNYLGKNITLISQAVDDSWARDVMPIF---------SFKADKMIANNFDFNCWGNK-- 107
Query: 133 GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
+ + D ++ I ++ M+LEGG++H +G+G LTT+ECLLN NRNP++
Sbjct: 108 --FSPFDNDRRLKNNIAKQQKWQVNSSKMILEGGAVHSNGQGILLTTQECLLNSNRNPNM 165
Query: 193 TKGQIENELKAYLGVMKIIWLPRGLFGMIH-DGEA------------------------- 226
K QIE+EL + LGV KI+WLP G+ G DG
Sbjct: 166 QKEQIESELISILGVKKILWLPYGVAGDFDTDGHVDNVACFANKNTLIIQSCYDESDENF 225
Query: 227 -----------------------KPR---LAGTRLAASYVNFYIANGGIITPQFGDKKWD 260
+PR AG RLA SY+NFYI N II P F D D
Sbjct: 226 ARHQANIAYLNKYASEFDIVEIPQPRAQYFAGERLALSYLNFYIVNNAIIMPAFDDPN-D 284
Query: 261 GEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
A +L + F + ++V+GGG IHCIT QQPAI
Sbjct: 285 VIAFEILQKCFKDRNIEQF-NIIDLVVGGGGIHCITMQQPAI 325
>gi|56707578|ref|YP_169474.1| hypothetical protein FTT_0434 [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670049|ref|YP_666606.1| hypothetical protein FTF0434 [Francisella tularensis subsp.
tularensis FSC198]
gi|254370098|ref|ZP_04986104.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|379716840|ref|YP_005305176.1| Agmatine deiminase [Francisella tularensis subsp. tularensis
TIGB03]
gi|379725444|ref|YP_005317630.1| Agmatine deiminase [Francisella tularensis subsp. tularensis
TI0902]
gi|385794200|ref|YP_005830606.1| hypothetical protein NE061598_02420 [Francisella tularensis subsp.
tularensis NE061598]
gi|421755063|ref|ZP_16192017.1| hypothetical protein B343_02421 [Francisella tularensis subsp.
tularensis 80700075]
gi|56604070|emb|CAG45067.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320382|emb|CAL08450.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC198]
gi|151568342|gb|EDN33996.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|282158735|gb|ADA78126.1| hypothetical protein NE061598_02420 [Francisella tularensis subsp.
tularensis NE061598]
gi|377826893|gb|AFB80141.1| Agmatine deiminase [Francisella tularensis subsp. tularensis
TI0902]
gi|377828517|gb|AFB78596.1| Agmatine deiminase [Francisella tularensis subsp. tularensis
TIGB03]
gi|409089151|gb|EKM89204.1| hypothetical protein B343_02421 [Francisella tularensis subsp.
tularensis 80700075]
Length = 328
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 167/342 (48%), Gaps = 71/342 (20%)
Query: 13 LMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWE 72
L PAEWE HS WM WP R +D W + A ++AKVA I+K+EPV + + Q +
Sbjct: 3 LWPAEWEEHSATWMIWPAR---IDMWPN-ITKAYEIYAKVANTIAKYEPVNMVVNQHQLD 58
Query: 73 NARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDD 132
A+ L +N+ +I +++ SW RD P +A K+ +++FN WG
Sbjct: 59 IAKKYLGKNMTLISEAVDDSWARDIMPIF---------SFKADKLIANNFDFNCWGNK-- 107
Query: 133 GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
+ + D ++ I ++ M+LEGG++H +G+G LTT+ECLLN NRNP++
Sbjct: 108 --FSPFDNDRRLKNDIAKQQKWQVNSSKMILEGGAVHSNGQGVLLTTKECLLNLNRNPNM 165
Query: 193 TKGQIENELKAYLGVMKIIWLPRGLFGMIH-DGEA------------------------- 226
K QIE+EL + LGV KI+WLP G+ G DG
Sbjct: 166 QKEQIESELISILGVKKILWLPYGVAGDFDTDGRVDNVACFANKNTIIIQSCYDENDENF 225
Query: 227 -----------------------KPR---LAGTRLAASYVNFYIANGGIITPQFGDKKWD 260
+PR AG RLA SY+NFYI N II P FGD D
Sbjct: 226 ARHQANMTYLDKYASEFNIVEIPQPRAQYFAGERLALSYLNFYIVNNAIIMPAFGDPN-D 284
Query: 261 GEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
A +L + F + + ++V+GGG IHCIT QQPAI
Sbjct: 285 VIAFEILQKCFKDRSIEQL-NIIDLVIGGGGIHCITMQQPAI 325
>gi|163848838|ref|YP_001636882.1| agmatine deiminase [Chloroflexus aurantiacus J-10-fl]
gi|222526792|ref|YP_002571263.1| Agmatine deiminase [Chloroflexus sp. Y-400-fl]
gi|163670127|gb|ABY36493.1| Agmatine deiminase [Chloroflexus aurantiacus J-10-fl]
gi|222450671|gb|ACM54937.1| Agmatine deiminase [Chloroflexus sp. Y-400-fl]
Length = 351
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 131/358 (36%), Positives = 168/358 (46%), Gaps = 75/358 (20%)
Query: 5 GTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTV 64
TPA GY MPAEWEPH W+ WP + E +W V+A+ +++ E V +
Sbjct: 2 ATPAELGYRMPAEWEPHQATWLSWPHKEE---SWPGIIDRIWPVYARFVAELARGETVHI 58
Query: 65 CAS-AAQWENARSQLPE-----NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVA 118
+ AA + AR L E +IR+ E N +W RD G VV + A ++A
Sbjct: 59 NVNDAAMADQARFFLAEAGAVGDIRLHEFPTNDAWCRDHGAIFVVRDTPAGR-----ELA 113
Query: 119 GIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLT 178
DW FN+WGG Y + LD Q+ ++ + +PRF MVLEGGSI VDG G LT
Sbjct: 114 ATDWEFNAWGGK----YPPYDLDNQIPARMAAYLGVPRFCGGMVLEGGSIDVDGNGLLLT 169
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG-------------- 224
+E+CLLN NRNPHL + IE L+ LGV I+WL G+ G DG
Sbjct: 170 SEQCLLNPNRNPHLDRAAIEQRLREMLGVHTILWLGEGIVGDDTDGHIDDLARFVAPGVV 229
Query: 225 ----EAKP-------------RLAGTRLAA------------------------SYVNFY 243
E P RL R AA SY NFY
Sbjct: 230 VTVVEDDPLDENYHVLQDNLRRLQLMRDAAGRPLTVLTIPMPPPVVFQGQRLPASYANFY 289
Query: 244 IANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
IAN +I P F D A VL Q FP VVGIE A +++ G G+ HC++QQ PA
Sbjct: 290 IANHAVIVPTFNHPN-DQRACAVLQQCFPDRRVVGIE-ATDVIWGLGSWHCLSQQVPA 345
>gi|87122612|ref|ZP_01078490.1| Porphyromonas-type peptidyl-arginine deiminase, partial
[Marinomonas sp. MED121]
gi|86162149|gb|EAQ63436.1| Porphyromonas-type peptidyl-arginine deiminase [Marinomonas sp.
MED121]
Length = 337
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 121/345 (35%), Positives = 161/345 (46%), Gaps = 73/345 (21%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQ 70
G+ MPAEWE H CWM WP R E N H +A VA AIS+FE V + +A
Sbjct: 8 GFRMPAEWEEHDACWMMWPSRNEVWLNMEKTKQH----YADVANAISQFEKVNLLVNAKD 63
Query: 71 WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
A L + + +IE +N SW RD P ++N ++AG W FN+WG
Sbjct: 64 IGQASQLLEDKVNLIETELNDSWARDACPNFLINDQG--------ELAGSVWRFNAWGEK 115
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
Y + LD +V K+L ++ F +V EGG++ DGEGT +TT CLLN NRNP
Sbjct: 116 ----YHPYQLDDEVGEKVLKIAQVQSFVSDLVAEGGAVTTDGEGTLITTASCLLNTNRNP 171
Query: 191 HLTKGQIENELKAYLGVMKIIWLP------------RGLFGMIHDG-------------- 224
TK +ENEL LG K+IWLP G+ I G
Sbjct: 172 GWTKQDVENELCRTLGASKVIWLPGNCDENETDGHVDGIAQFIKPGVVLMETSFNTEHPW 231
Query: 225 ---------------EAKPR----------LAGTRLAASY----VNFYIANGGIITPQFG 255
+AK R T L +Y +N Y ANG +I P++G
Sbjct: 232 YQIMKDNLAALEGQTDAKGRKIEICFIEDGFDATPLNDNYCTSYINSYFANGAVIMPKYG 291
Query: 256 DKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
D A +V + FP+ E+V ++ + I +GGG IHCITQQQP
Sbjct: 292 IAA-DERAKKVYQRLFPEREIVQLDISH-IAVGGGGIHCITQQQP 334
>gi|449017465|dbj|BAM80867.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 398
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/222 (48%), Positives = 138/222 (62%), Gaps = 18/222 (8%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQ 70
G P EW H+ CW+GWP ER DNWR A AQR A+V AI++ EPVTV SA+
Sbjct: 11 GLRQPGEWASHANCWIGWP---ERPDNWRLGAAPAQRAVAQVVAAIAELEPVTVVCSASA 67
Query: 71 WENARSQLPEN-----------IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
+ A + L ++ +RV+E+S + W RDTG + V + + AQ AG
Sbjct: 68 FIQACALLVDHPSSPGQCAQYPVRVVELSTDDCWLRDTG-AVFVCGAEPENAAQG---AG 123
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTT 179
+ ++FN+WGG CY SLD VA+K+L ERLPRF MVLEGGSI VDGEGT LTT
Sbjct: 124 VHFDFNAWGGAQGNCYAACSLDQLVAKKMLLLERLPRFWCPMVLEGGSISVDGEGTALTT 183
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMI 221
ECLLN NRNP ++ IE +L+AYLG+ K+IWLP G+ G +
Sbjct: 184 AECLLNPNRNPTYSQNDIEKQLRAYLGITKVIWLPYGIEGDV 225
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 57/80 (71%)
Query: 223 DGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERA 282
D ++ R AG RLAASYVNFY ANGGII P FG + D A L +A P+ +VV + A
Sbjct: 312 DSDSYQRRAGERLAASYVNFYRANGGIIMPGFGLPESDEAARAALQKALPQIQVVQVPVA 371
Query: 283 REIVLGGGNIHCITQQQPAI 302
REI+LGGGNIHC+TQQQP I
Sbjct: 372 REILLGGGNIHCLTQQQPVI 391
>gi|167751203|ref|ZP_02423330.1| hypothetical protein EUBSIR_02189 [Eubacterium siraeum DSM 15702]
gi|167655710|gb|EDR99839.1| agmatine deiminase [Eubacterium siraeum DSM 15702]
Length = 362
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 127/207 (61%), Gaps = 12/207 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAE+ HS C + +P ER D+W+ + A++ F +VA AI+K E VTV AS Q+EN
Sbjct: 1 MPAEFSSHSGCIIIFP---ERPDSWQYGGVKAKKAFCEVACAIAKSEKVTVLASFEQYEN 57
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
AR LP +IRV+EMS + +W RD P VVN + G+DW FN+WGG+ DG
Sbjct: 58 ARRMLPPHIRVVEMSSDDAWARDVSPEFVVNDKG--------DMRGVDWYFNAWGGLVDG 109
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHS-MVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
Y W D ++ARK+ + + S VLEGGSI DGEGT LTTE CLL+ RNP L
Sbjct: 110 LYFPWDKDNKIARKVCDMLDVDVYDFSDFVLEGGSISADGEGTILTTEACLLSAGRNPQL 169
Query: 193 TKGQIENELKAYLGVMKIIWLPRGLFG 219
+K +IE L LG K+IWLP G+ G
Sbjct: 170 SKAEIEENLCEGLGAKKVIWLPGGILG 196
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFG--DKKWDGEAVRVLSQAFPKYEVVG 278
+ DGE R + L+ASYVN YI N ++ P FG + ++D A + + FP ++
Sbjct: 272 LFDGEPT-RDTVSPLSASYVNLYIGNKTVVMPAFGGENTEYDLRAKSEVQKVFPDRGIIQ 330
Query: 279 IERAREIVLGGGNIHCITQQQPAI 302
I AR+I++GGGNIHCIT Q P+
Sbjct: 331 I-YARDILIGGGNIHCITHQIPSF 353
>gi|400287646|ref|ZP_10789678.1| peptidyl-arginine deiminase [Psychrobacter sp. PAMC 21119]
Length = 375
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 92/214 (42%), Positives = 128/214 (59%), Gaps = 12/214 (5%)
Query: 5 GTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTV 64
TP G+ MPAE+EP + WM WP R DNWR A AQ+ +A VA AI++F V +
Sbjct: 12 STPQQDGFYMPAEFEPIEKTWMVWPYR---ADNWRQQAAPAQKSYADVALAINRFCEVGI 68
Query: 65 CASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
+ +++ R LP +I VI M N +W RDT PT ++N +A ++ DW F
Sbjct: 69 LVNPDDYQSCRDSLPADIDVISMPSNDAWARDTVPTFLIN--------EAGELRACDWTF 120
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECL 183
N+WGG DG Y W D ++A ++ + R+ V+EGG+ HVDGEGT LTT CL
Sbjct: 121 NAWGGDYDGLYSPWDDDDKLAERLCDHLDIKRYRTDDFVMEGGAFHVDGEGTVLTTRMCL 180
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
L+ RNPHLT+ QIE +LKAYL + K++W+ G+
Sbjct: 181 LSPGRNPHLTEAQIEAKLKAYLNIQKVLWIDDGI 214
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 218 FGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVV 277
+ + +AK R G ASY NF I N +I PQ+ D D A+ L + FP+++VV
Sbjct: 287 YDIEQSDDAKARHTGDICIASYANFLICNDAVIVPQYDDIN-DALAIEQLEKVFPQHQVV 345
Query: 278 GIERAREIVLGGGNIHCITQQQP 300
G+ R +EIV GGGNIHCITQQQP
Sbjct: 346 GV-RTKEIVFGGGNIHCITQQQP 367
>gi|239628082|ref|ZP_04671113.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239518228|gb|EEQ58094.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 368
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 133/216 (61%), Gaps = 12/216 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
++ TP G+ MP E+EP Q ++ WP ER D WR+ AQ+V VA I K++ +
Sbjct: 4 IHSTPKKDGFRMPGEFEPRRQDFLIWP---ERTDTWRNGGKPAQQVLVDVAKEIIKYDKL 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
TV S+ Q+ENAR++LPE +RV+EMS + +W +D GP V+N + G+ W
Sbjct: 61 TVFCSSGQYENARARLPEAVRVVEMSTDDAWAQDKGPFYVINDKG--------DMRGVTW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+N++GG++ G Y W D + A K+L E R+ MVLEGG+ VDG+GT + TE
Sbjct: 113 GWNAYGGLEGGLYFPWKYDSEFAAKLLDLEDYDRYDARKMVLEGGATQVDGQGTLIITEN 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
+LN+NRNPH+TK Q+E LK Y+ + K+IWL G+
Sbjct: 173 SVLNRNRNPHMTKEQVEEYLKEYMNLEKVIWLKDGM 208
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
A R+AG LA +Y+N Y N ++ PQ+GD D A + ++ P +++ I RE
Sbjct: 290 AASRVAGLPLAVTYINCYFMNHALLVPQYGDPM-DQVACDLYAKLMPDRQIIKI-WTREW 347
Query: 286 VLGGGNIHCITQQQP 300
L GGNIHC+ QQP
Sbjct: 348 SLCGGNIHCMALQQP 362
>gi|18266210|gb|AAL67495.1|AF459410_1 senescence-associated putative protein [Narcissus pseudonarcissus]
Length = 143
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 87/143 (60%), Positives = 105/143 (73%), Gaps = 5/143 (3%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M++ G P+L GY MPAEWEPH QCWMGWP ER DNWR++A Q F +VA+AIS+FE
Sbjct: 4 MDLEGKPSLMGYRMPAEWEPHQQCWMGWP---ERPDNWRENARFGQHAFVEVASAISQFE 60
Query: 61 PVTVCASAAQWENARSQLPE--NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVA 118
PVT+C S+AQ+ A L NIR++EMSMN SWFRD+GPT VV +SSG + VA
Sbjct: 61 PVTICVSSAQYTTACHLLQNKPNIRIVEMSMNDSWFRDSGPTFVVLDRESSSGYEVHPVA 120
Query: 119 GIDWNFNSWGGVDDGCYRDWSLD 141
GIDW FNSWGG ++GCY DWSLD
Sbjct: 121 GIDWIFNSWGGTEEGCYSDWSLD 143
>gi|116334760|ref|YP_796287.1| peptidylarginine deiminase-like protein [Lactobacillus brevis ATCC
367]
gi|116100107|gb|ABJ65256.1| Peptidylarginine deiminase related enzyme [Lactobacillus brevis
ATCC 367]
gi|152001643|gb|ABS19479.1| putitive agmatine deiminase [Lactobacillus brevis]
Length = 370
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 132/219 (60%), Gaps = 12/219 (5%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M + TP G+ MP E+E ++ ++ WP ER DNWR+ AQ+ FA++A I+ +E
Sbjct: 1 MRLAQTPVQDGFRMPGEFEDQAESYLIWP---ERPDNWREGGKPAQKAFAQLAETIATYE 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
PVT+ + Q+ +AR+ L +RV+EMS N +W +D GP VVN + ++ +
Sbjct: 58 PVTMLVNQGQYTHARTVLSPAVRVVEMSSNDAWMKDVGPFYVVNDTG--------ELRAV 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
D+ FN+WGG+ DG Y W D ++ +K+ +R+P + VLEG +IHVDG+GT + TE
Sbjct: 110 DFQFNAWGGLLDGLYFPWDQDNRIGKKVADLQRIPVYEAQFVLEGCAIHVDGQGTLIATE 169
Query: 181 ECLLNKNRNP-HLTKGQIENELKAYLGVMKIIWLPRGLF 218
+ +L++ RNP LTK E YLG+ K +WLP G F
Sbjct: 170 DVVLSEGRNPGGLTKAVAEQIFHDYLGITKTVWLPHGYF 208
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR+AG RL ASYV++ N I+ P F D + D A R L+ +P +VV + A EI+
Sbjct: 291 PRVAGQRLTASYVSYITTNRAILMPVFDDLQ-DAVAHRQLAALYPNRQVVDVS-ANEILT 348
Query: 288 GGGNIHCITQQQPAIPTNAAKL 309
GGGNIH I P T ++
Sbjct: 349 GGGNIHTIAAGVPGRHTGGQQV 370
>gi|257791937|ref|YP_003182543.1| agmatine deiminase [Eggerthella lenta DSM 2243]
gi|257475834|gb|ACV56154.1| agmatine deiminase [Eggerthella lenta DSM 2243]
Length = 373
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 12/215 (5%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
+ TP GY MP E+EP Q ++ WP ER D WR+ AQ V +VA I K EP+T
Sbjct: 6 DSTPKQDGYRMPGEFEPRKQDFLIWP---ERQDTWRNGGKPAQAVLVEVAKEIIKHEPLT 62
Query: 64 VCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWN 123
V SA Q+ENAR++LPE +RV+EM+++ +W +D GP VVN + G+ W
Sbjct: 63 VFCSADQYENARTRLPEGVRVVEMTIDDAWAQDKGPFYVVNDKG--------DMRGVTWG 114
Query: 124 FNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHS-MVLEGGSIHVDGEGTCLTTEEC 182
+N++GG++ G Y W D + A K+L E + + MV EGG++ +DGEGT + TE
Sbjct: 115 WNAYGGLEGGLYFPWKRDQEFATKLLDLENYDAYDATKMVFEGGAMQIDGEGTLIVTENS 174
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
+LN NRNPHLTK + E K Y+G+ K+IWL G+
Sbjct: 175 VLNHNRNPHLTKEEAEWYFKEYMGLEKVIWLKDGM 209
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 225 EAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERARE 284
+A R A LA +Y+N Y NGG++ PQ+GD D A + ++ P E++ I RE
Sbjct: 290 DAASREADLPLAITYINSYFVNGGLLVPQYGDPM-DQVACDMFAELMPDREIIKI-YTRE 347
Query: 285 IVLGGGNIHCITQQQPAIPTNAAKL 309
L GGNIHC+ QQP AAKL
Sbjct: 348 WSLCGGNIHCMALQQPDPAAIAAKL 372
>gi|284045668|ref|YP_003396008.1| Agmatine deiminase [Conexibacter woesei DSM 14684]
gi|283949889|gb|ADB52633.1| Agmatine deiminase [Conexibacter woesei DSM 14684]
Length = 340
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 171/352 (48%), Gaps = 69/352 (19%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQR-VFAKVATAISKFEP 61
M TP G MPAEW H + + WP R WRD ++ A R V A+V A++ FEP
Sbjct: 1 MPSTPREDGLRMPAEWARHERTLIAWPARAA---TWRDTSIEAAREVHAQVVAAVAAFEP 57
Query: 62 VTVCASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
VT+ A +AR ++P N+ ++E+ ++ SW RD GP ++V + A A +
Sbjct: 58 VTLVVDPAHAADARRRVPTANVELLELPIDDSWLRDNGPIMLVGEDGADRAA-------V 110
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
D+ FN+WGG + + D A +++ L R+ ++LEGGSI VDG+GT +TTE
Sbjct: 111 DFGFNAWGGK----FAPYDRDAAAAAGMIAHLGLHRYEAPLILEGGSIAVDGDGTLVTTE 166
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWL-----------------------PRGL 217
+CLLN NRNP LT QIE L++YLG +I+WL R L
Sbjct: 167 QCLLNPNRNPALTPQQIEERLRSYLGAERIVWLGSGLVEDHDTDGHVDNICVFLAPGRAL 226
Query: 218 FGMIHDGEAKPR----------------------LAGTR------LAASYVNFYIANGGI 249
+ D E R L TR +A Y N Y+ N
Sbjct: 227 LQTVADAEDPNRGNAEENARRLRAAGIEVVPFELLPRTRRDDGDAIAIPYTNLYLCNDAA 286
Query: 250 ITPQFG-DKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
I P D + D EA+R L + P EVVG+ R + LGGG +HCITQQ P
Sbjct: 287 IVPLSQLDPELDEEALRRLRELMPDREVVGVP-GRVLALGGGGVHCITQQVP 337
>gi|425744722|ref|ZP_18862777.1| agmatine deiminase [Acinetobacter baumannii WC-323]
gi|425490318|gb|EKU56618.1| agmatine deiminase [Acinetobacter baumannii WC-323]
Length = 361
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/225 (47%), Positives = 132/225 (58%), Gaps = 12/225 (5%)
Query: 1 MEMNGT-PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKF 59
ME N T P G+ MP EW WM WP R DNWR + AQ FA+VA AI++
Sbjct: 1 MEQNATTPKQQGFSMPGEWSAQEAVWMIWPYR---TDNWRGNGAPAQHAFAQVAAAIAQK 57
Query: 60 EPVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
PV + A+ E AR +P + ++EM + +W RDTGPTIV N Q K A
Sbjct: 58 TPVFMAVPQAEMEKARQVMPAQVTLVEMESDDAWTRDTGPTIVKN-------TQGQKKA- 109
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTT 179
I+W FN+WGG + G Y W D +A KI + + + +VLEGG+IHVDGEGT LTT
Sbjct: 110 INWVFNAWGGKNGGLYFPWDQDQLIAGKIAAQHGIDTYSTPLVLEGGAIHVDGEGTLLTT 169
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
ECLLN NRNPHLT+ QIEN L+ L V IWLP+G+F DG
Sbjct: 170 AECLLNPNRNPHLTQAQIENILQECLDVTTFIWLPQGVFNDETDG 214
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
I G A R G RLA SYVN+ I+N II P D++ D +A + Q +P Y + G+
Sbjct: 283 IDKGNAIERFEGNRLAGSYVNYLISNQQIIFPLL-DERTDEQAKALFQQMYPDYLITGVP 341
Query: 281 RAREIVLGGGNIHCITQQQPA 301
AREI+LGGGNIHCITQQ PA
Sbjct: 342 -AREILLGGGNIHCITQQIPA 361
>gi|452961571|gb|EME66871.1| agmatine deiminase [Rhodococcus ruber BKS 20-38]
Length = 334
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 164/346 (47%), Gaps = 72/346 (20%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAE EPH + WM +P L + ++ A+ +A VA A+++FEPVTV A Q +
Sbjct: 1 MPAESEPHERTWMAFPTEGYSLGDTAEEHHEARATWAAVAHAVAEFEPVTVVADPGQVDA 60
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
AR L ++ +IE +N +W RD GPT V++ + G+DW FN WG D
Sbjct: 61 ARRYLSRDVELIEAPLNDAWMRDIGPTFVLHDDG--------RRGGVDWVFNGWGAQD-- 110
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ W D ++A +L + R ++V EGG I VDG GT L TE L+ RNPHL
Sbjct: 111 -WARWDHDARIASFVLERTGVERVASTLVNEGGGIQVDGLGTVLLTETVQLDPGRNPHLD 169
Query: 194 KGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIHDGEAK--- 227
K +E EL+ +G IWLPRGL +G ++HD +
Sbjct: 170 KAAVEAELRRTIGATCAIWLPRGLTRDQERYGTRGHVDIVAAIASPGVVLVHDQRDRDHP 229
Query: 228 ----------------------------PRLAGTRLAASYVNF-----YIANGGIITPQF 254
P A R +V++ Y+ NGG+I +F
Sbjct: 230 DFDVTALIVDRLQHSTDVRGEPWRIVRVPAPATVRDDEGWVDYSYINHYVVNGGVIACRF 289
Query: 255 GDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
GD D EA +L+ A+P +VG++ AR + GG IHCITQ QP
Sbjct: 290 GDAA-DDEAAEILAAAYPGRRIVGVD-ARPLFRRGGGIHCITQHQP 333
>gi|375308616|ref|ZP_09773899.1| agmatine deiminase [Paenibacillus sp. Aloe-11]
gi|375079243|gb|EHS57468.1| agmatine deiminase [Paenibacillus sp. Aloe-11]
Length = 343
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 172/349 (49%), Gaps = 73/349 (20%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
Y MP EW PH + ++ WPV+ + + D + +A + A+++FEPVTV + A
Sbjct: 8 YKMPPEWAPHERTYISWPVQSSMV--YPDMHADVCKGYAGIVRAMAEFEPVTVVVNPADL 65
Query: 72 ENARS-QLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
E+ R+ +L E + ++ + + +W RD GPT + N+ ++AG++W FN+WGG
Sbjct: 66 ESVRALELGERVELLPIEHSDAWLRDNGPTFLTNEHG--------QLAGVNWKFNAWGGK 117
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
Y W LD QVA +IL +PRF +V+EGGS+HVDGEGT +TTEECLLN NRNP
Sbjct: 118 ----YAPWDLDDQVAPQILDKLGVPRFDAPLVMEGGSLHVDGEGTLITTEECLLNPNRNP 173
Query: 191 H---------------------LTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG----- 224
L +G +E ++ + P + + D
Sbjct: 174 ELSREDIERYVREYTGAEKIIWLKRGLSGDETDGHVDNIACFAAPGKVIMQVCDDPEDEN 233
Query: 225 ---------------EAK------------PRL--AGTRLAASYVNFYIANGGIITPQFG 255
+AK PR+ +RL SY+NFY NGGII P FG
Sbjct: 234 YEITQENLRILEQATDAKGRKLEVIRIGQPPRVDYEDSRLTLSYINFYFVNGGIILPVFG 293
Query: 256 D--KKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
+ D A +VL++ FP + ++ ++ GGN+HC TQQ PA+
Sbjct: 294 GAAAESDLAAQQVLTKVFPDRTIRTVD-GMAVIREGGNVHCTTQQMPAV 341
>gi|425746990|ref|ZP_18865010.1| agmatine deiminase [Acinetobacter baumannii WC-323]
gi|425484417|gb|EKU50821.1| agmatine deiminase [Acinetobacter baumannii WC-323]
Length = 347
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 133/211 (63%), Gaps = 11/211 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAEWEP WM WP R DNWR DA AQ+ FA+VATAIS+ PV + +
Sbjct: 1 MPAEWEPQQCIWMIWPYR---TDNWRQDAAPAQQAFAQVATAISRTTPVYMAVPKTEMHK 57
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
A+ +P +I ++E+ + +W RDTGPTIV ++S + IDW FN+WGG + G
Sbjct: 58 AKRIMPADITLVEIESDDAWMRDTGPTIVKDQSGNN--------IAIDWIFNAWGGENGG 109
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
Y +W DL+VA ++ + + S++LEGG+IHVDGEGT LTTEECLLN NRNP LT
Sbjct: 110 LYSNWDKDLKVASQVAHFHSIDLYKSSLILEGGAIHVDGEGTLLTTEECLLNPNRNPELT 169
Query: 194 KGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
+ QIE+EL L + + IWLP G++ DG
Sbjct: 170 RSQIEDELSKLLNIKQFIWLPLGVYNDETDG 200
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+ G A R G RLA SYVN+ I+N II P D++ D +A + Q +P Y + G+
Sbjct: 269 VEKGLAIERFEGNRLAGSYVNYLISNKQIIFPLL-DERTDEQAKALFQQMYPDYLITGVP 327
Query: 281 RAREIVLGGGNIHCITQQQP 300
AREI+LGGGNIHCITQQ P
Sbjct: 328 -AREILLGGGNIHCITQQIP 346
>gi|392382435|ref|YP_005031632.1| Agmatine deiminase [Azospirillum brasilense Sp245]
gi|356877400|emb|CCC98234.1| Agmatine deiminase [Azospirillum brasilense Sp245]
Length = 338
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/351 (35%), Positives = 164/351 (46%), Gaps = 69/351 (19%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRV-FAKVATAISKFEPVTV 64
TPA G+ MP EWE H++CWM WP R E W + A A + VA AIS+FEPVT+
Sbjct: 3 TPAAEGFTMPGEWERHTRCWMAWPCRPE---TWPEGAFDAAAAAYTDVARAISRFEPVTM 59
Query: 65 CASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
A ++ + ++ + ++ SW RDTGP+ V + +VAG+ W F
Sbjct: 60 VCDPADVADSSLACGPGVEILPLPISDSWIRDTGPSFVTDGKG--------QVAGVHWRF 111
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL 184
N+WGG Y D + D QV R +L L RF +V+EGGS HVDGEGT LTTE+CLL
Sbjct: 112 NAWGG----NYPDSAKDQQVGRLMLEHLGLRRFEAPLVMEGGSFHVDGEGTLLTTEQCLL 167
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGE-------AKP--RLAGTRL 235
N NRNP+L K +IE LK +LG+ +IWL G DG KP +A T
Sbjct: 168 NPNRNPNLGKAEIEALLKEHLGISSVIWLGEGYQDDETDGHIDEIALFVKPGVVMAITTD 227
Query: 236 AASYVNFYIANGGI---------------ITPQFGDKKWDGEAVRVLSQ----------- 269
NF + + P + D VR+
Sbjct: 228 DPGDANFKAFQDNLDRLKRARDAQGRELEVIPVRQPARRDENGVRLTLSYTNLYIANGGI 287
Query: 270 AFPKYEVVGIERA----------REIV--------LGGGNIHCITQQQPAI 302
P +E + A RE+V GGG IHCITQQQPA+
Sbjct: 288 VMPAFEDSADDEAFRIVRRAFPDREVVQVPALDIVRGGGGIHCITQQQPAV 338
>gi|355572755|ref|ZP_09043821.1| N-carbamoylputrescine amidase., Agmatine deiminase [Methanolinea
tarda NOBI-1]
gi|354824299|gb|EHF08552.1| N-carbamoylputrescine amidase., Agmatine deiminase [Methanolinea
tarda NOBI-1]
Length = 626
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/362 (33%), Positives = 171/362 (47%), Gaps = 78/362 (21%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHA-QRVFAKVATAISKF 59
M + TPA G+ MPAEWEPH W+ WP LDN L A +R + ++ A+
Sbjct: 283 MHLRITPAQAGFRMPAEWEPHQGVWLSWP-----LDNGTFSDLKAVERAYIRMIRALVGR 337
Query: 60 EPVTVCASAAQWEN------ARSQLPEN-IRVIEMSMNGSWFRDTGPTIVVNKSSASSGA 112
E + + + E AR +P +R WFRD GPT +V+
Sbjct: 338 ERIYLLVQDTEMERRVRDILARECIPAGYVRFFIFPYADVWFRDYGPTFLVH-------G 390
Query: 113 QAPKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDG 172
+ P +A ++W FN+WG Y + D +V I ++P F MVLEGGSI DG
Sbjct: 391 RDPSLAMVNWTFNAWGEK----YPELVSDDRVPAFIEKELQIPSFVPGMVLEGGSIETDG 446
Query: 173 EGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL--------------- 217
GT L TE+CLL++NRNP LTKG+IE +L+ YLGV ++IWL G+
Sbjct: 447 NGTLLVTEQCLLHENRNPALTKGEIEAKLRDYLGVSRVIWLKGGIAGDDTDGHIDDVARF 506
Query: 218 ------------------FGMI------------HDGE-------AKPRLAGTRLAASYV 240
+G++ HDG P L ASY
Sbjct: 507 TSPGTVVCAVEEDPHSGNYGILQENLALLKKATSHDGRPLSIIPLPMPATGEEVLPASYT 566
Query: 241 NFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
NFYI NG ++ P F D D +A+++L FP VVGI+ ++ G G IHC+TQQ P
Sbjct: 567 NFYIGNGVVMVPTFNDPA-DRKALQILESLFPGRVVVGID-CSAMITGMGAIHCVTQQFP 624
Query: 301 AI 302
++
Sbjct: 625 SL 626
>gi|374582341|ref|ZP_09655435.1| peptidylarginine deiminase-like enzyme [Desulfosporosinus youngiae
DSM 17734]
gi|374418423|gb|EHQ90858.1| peptidylarginine deiminase-like enzyme [Desulfosporosinus youngiae
DSM 17734]
Length = 345
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 166/355 (46%), Gaps = 77/355 (21%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
P Y MP EW H + ++ WP++ + +D + +A++ AI++FEPVTV
Sbjct: 3 PKNLNYKMPPEWNRHRRTFISWPIKASMC--YPEDYAAVCQGYAEIIKAIAEFEPVTVVV 60
Query: 67 SAAQWENARSQLPENIRV--IEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
+ + E A S L N R+ + + N +W RD GPT +++++ +AG++W F
Sbjct: 61 NPEELE-ALSHLFHNERIGFLPIEHNDAWLRDNGPTFLIHENE--------DLAGVNWKF 111
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL 184
N+WGG Y W LD QVA KIL L RF +V+EGGS HVDGEGT LTTEECLL
Sbjct: 112 NAWGGK----YAPWDLDDQVAAKILDHVGLKRFDAPIVMEGGSFHVDGEGTLLTTEECLL 167
Query: 185 NKNRNPHL-----------------------------TKGQIEN---------------- 199
N NRNP L T G ++N
Sbjct: 168 NPNRNPELSKEQIEGELKKFLNIRKVVWLKNGLDGDETDGHVDNIACFAAPGKILLQVCE 227
Query: 200 ------------ELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANG 247
LK G + P + + + + L RL SY+NFY NG
Sbjct: 228 ESGDENYKITQENLKILEGETDALGRPLEIIPIHQPPKLRDPLTNDRLTLSYLNFYFVNG 287
Query: 248 GIITPQFGD--KKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
GII P FG K+ D AV+VLS FPK + + I+ GGN+HC TQQ P
Sbjct: 288 GIILPVFGGEAKESDRLAVQVLSNTFPKRRIRTV-NGMGIIREGGNVHCTTQQMP 341
>gi|374324029|ref|YP_005077158.1| peptidylarginine deiminase [Paenibacillus terrae HPL-003]
gi|357203038|gb|AET60935.1| peptidylarginine deiminase [Paenibacillus terrae HPL-003]
Length = 343
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 171/359 (47%), Gaps = 93/359 (25%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
Y MP EW PH + ++ WPV+ + + D + +A + A+++FEPVTV + +
Sbjct: 8 YKMPPEWAPHERTYISWPVQSSMV--YPDMHADVCKGYAGIIRAMAEFEPVTVVVNPSDL 65
Query: 72 ENARS-QLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
E+ ++ +L E + ++ + + +W RD GPT + N+ ++AG++W FN+WGG
Sbjct: 66 ESVQALELGERVELLPIEHSDAWLRDNGPTFLTNEQG--------QLAGVNWKFNAWGGK 117
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
Y W LD QVA +IL T LPRF +V+EGGS+H+DGEGT +TTEECLLN NRNP
Sbjct: 118 ----YAPWDLDDQVAPQILDTLGLPRFDAPLVMEGGSLHIDGEGTLITTEECLLNPNRNP 173
Query: 191 HLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGII 250
L++ +IE + Y GV KIIWL RGL G DG + + A G +I
Sbjct: 174 ELSREEIEQYVCEYTGVEKIIWLKRGLSGDETDGH-----------VDNIACFAAPGKVI 222
Query: 251 T-----PQFGDKKWDGEAVRVLSQAFP----KYEVVGI---------------------- 279
P + K E +R+L QA K EV+ I
Sbjct: 223 MQVCDDPMDENYKITQENLRILEQATDAKGRKLEVIQIGQPPRVDFDDSRLTLSYINFYF 282
Query: 280 -----------------ERAREIVLG-------------------GGNIHCITQQQPAI 302
+RA E VL GGN+HC TQQ PA+
Sbjct: 283 VNGGIILPVFGGTATESDRAAEQVLANVFPERTIRTVDGMAVIREGGNVHCTTQQMPAV 341
>gi|332711985|ref|ZP_08431915.1| peptidylarginine deiminase family enzyme [Moorea producens 3L]
gi|332349313|gb|EGJ28923.1| peptidylarginine deiminase family enzyme [Moorea producens 3L]
Length = 345
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 169/343 (49%), Gaps = 65/343 (18%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALH-AQRVFAKVATAISKFEPVTV 64
TP G+ PAEW+PH M +P NW+ L A+R +A VA A+++FEPV++
Sbjct: 16 TPLEDGFFFPAEWQPHEFTIMVFP----PAQNWKGYGLKKARREWAAVANAVNEFEPVSM 71
Query: 65 CASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
A+ L +I +IE +N W RD+GP +VN G + +VAG + F
Sbjct: 72 VVHPQDKGVAKGLLSSDIELIEFPVNDGWARDSGPMFLVN------GKGSRRVAG--FTF 123
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL 184
N WGG D L ++ + +T + S+VLEGG + +DGEGT +TTEECLL
Sbjct: 124 NGWGGKFPPYQDDALLKARLCHYLDTT----MYSSSLVLEGGGVTLDGEGTIITTEECLL 179
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF-GMIHDG------------------- 224
N NRNP ++K Q+E LK YLG ++WL RG+ + DG
Sbjct: 180 NPNRNPTMSKSQVERLLKDYLGAETVVWLGRGIVPDPVTDGHVDGICAFAAPGLVLLHST 239
Query: 225 ------------EAKPRLAGTR---------------LAASYVNFYIANGGIITPQFGDK 257
+AK RL + L +++NFYIANG +I P GD
Sbjct: 240 DDANDPNYKICRDAKHRLQQSTDARGRKFEIVEIPLGLDIAHMNFYIANGAVIVPIAGDS 299
Query: 258 KWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
D + +L + FP +VVG+ + + GGG IHCITQQ P
Sbjct: 300 SQDDAPLAILREVFPGRKVVGV-NSLILAEGGGGIHCITQQVP 341
>gi|93005652|ref|YP_580089.1| peptidyl-arginine deiminase [Psychrobacter cryohalolentis K5]
gi|92393330|gb|ABE74605.1| agmatine deiminase [Psychrobacter cryohalolentis K5]
Length = 355
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 123/205 (60%), Gaps = 12/205 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAE+EP + WM WP R DNWR A+ AQ+ +A VA AIS F V V + +++
Sbjct: 1 MPAEFEPIEKIWMVWPYR---ADNWRQQAIPAQKSYADVALAISGFCEVGVLVNPDDYQS 57
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
R LP NI VI M N +W RDT PT ++N ++ DW FN+WGG DG
Sbjct: 58 CRDSLPANIDVIAMPSNDAWARDTVPTFLINDKG--------ELRACDWTFNAWGGDYDG 109
Query: 134 CYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
Y W D ++A ++ + R+ V+EGG+ HVDGEGT LTT CLL+ RNPHL
Sbjct: 110 LYSPWDDDDKLAERLCDHLDIKRYRTDDFVMEGGAFHVDGEGTVLTTRMCLLSPGRNPHL 169
Query: 193 TKGQIENELKAYLGVMKIIWLPRGL 217
T+ QIE++LKAYL V K++W+ G+
Sbjct: 170 TEAQIEDKLKAYLNVQKVLWIDDGI 194
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 218 FGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVV 277
+ + +AK RL G ASY NF I N II PQ+ D D A+ L +AFP+++VV
Sbjct: 267 YDIEQSDDAKTRLTGDVCIASYANFLICNDAIIVPQYDDIN-DALAIEQLEKAFPQHQVV 325
Query: 278 GIERAREIVLGGGNIHCITQQQP 300
G++ +EIV GGGNIHCITQQQP
Sbjct: 326 GVQ-TKEIVFGGGNIHCITQQQP 347
>gi|427440530|ref|ZP_18924876.1| peptidylarginine deiminase-like protein [Pediococcus lolii NGRI
0510Q]
gi|425787491|dbj|GAC45664.1| peptidylarginine deiminase-like protein [Pediococcus lolii NGRI
0510Q]
Length = 363
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 127/218 (58%), Gaps = 11/218 (5%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M++ P G+ MPAE+E Q M WP +R DNWR+ AQ+ F ++AT I+K++
Sbjct: 1 MKLTTIPQQDGFWMPAEFESKGQSLMMWP---QRPDNWRNGGKPAQKSFVQLATLITKYQ 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
PVTV Q++NAR+ LP IRV+EMS N + +DTGP +VN V +
Sbjct: 58 PVTVFVDENQYKNARAMLPTQIRVLEMSNNDVFIKDTGPIELVNADGV--------VRCM 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
D+ FN+WGG+ DG Y W D +V K+ R+ +LEG S+ DGEGT +TTE
Sbjct: 110 DFGFNAWGGLLDGLYFPWDKDQEVTGKLADLFGWDRYQSDFILEGCSVVTDGEGTLITTE 169
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
E +L++ RN +TK Q E + YLG K+IWLP G F
Sbjct: 170 EVVLSEGRNKGITKAQAEEVFQNYLGAQKVIWLPEGFF 207
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G RL A+YVN+ + II P+F D D +A + L+ +P E++G A EI+
Sbjct: 291 PRTEGQRLTATYVNYITLDQAIIFPEFNDPN-DQKARQELANYYPDREIIGFP-ATEILT 348
Query: 288 GGGNIHCITQQQPA 301
GGG +H + P
Sbjct: 349 GGGGLHTVVLNMPG 362
>gi|255023487|ref|ZP_05295473.1| agmatine deiminase [Listeria monocytogenes FSL J1-208]
Length = 328
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/175 (49%), Positives = 116/175 (66%), Gaps = 9/175 (5%)
Query: 45 AQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVN 104
AQ+ + +VA AIS FEPVT+ S Q++NAR +LP+ IRVIEMS + +W RD GP+ +VN
Sbjct: 2 AQQNYKEVAVAISNFEPVTMFVSPNQYKNARKELPDTIRVIEMSNDDAWIRDYGPSFLVN 61
Query: 105 KSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVL 163
+ G+DW FN+WGG+ DG Y W D Q+A+K+ ER+ + +L
Sbjct: 62 DKG--------DMRGVDWGFNAWGGLLDGLYFPWDKDNQIAKKVCDLERIDYYSQKDFIL 113
Query: 164 EGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
EG SIHVDGEGT +TTEECLL++ RNP+LTK +IE LK Y V K+IWL G +
Sbjct: 114 EGCSIHVDGEGTLVTTEECLLSEGRNPNLTKIEIEQTLKKYFHVQKVIWLKHGFY 168
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR AG RLAASYVN+Y ANG II P F D K D +A +L + +P +VVGI +AREI+L
Sbjct: 251 PRQAGDRLAASYVNYYTANGAIIFPLFDDPK-DKDAQELLEKLYPDRKVVGI-KAREILL 308
Query: 288 GGGNIHCITQQQPAIPT 304
GGGNIHCITQ P T
Sbjct: 309 GGGNIHCITQHLPDKST 325
>gi|425735538|ref|ZP_18853851.1| hypothetical protein C272_10403 [Brevibacterium casei S18]
gi|425479480|gb|EKU46655.1| hypothetical protein C272_10403 [Brevibacterium casei S18]
Length = 339
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/350 (33%), Positives = 159/350 (45%), Gaps = 72/350 (20%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+ MPAE H + WM +P L +DA A+ +A VA A S+F PVTV S Q
Sbjct: 3 FHMPAETAAHDRIWMAFPSSGYALGASEEDAEAARSTWAAVAKAASEFTPVTVVVSPDQV 62
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
++AR L E I ++ ++ +W RD GPT VV+ ++A +DW FN WGG D
Sbjct: 63 DHARRHLGEGIDIVTAQLDDAWMRDIGPTFVVDDEG--------RLAAVDWVFNGWGGQD 114
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ W D + R + +P ++ EGG IHVDG+GT L T L+ RNP
Sbjct: 115 ---WAKWDNDEHIGRFVAEQVDVPVVSSTLRNEGGGIHVDGQGTVLATRSVQLDPGRNPG 171
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIHDG---- 224
LT+ +E E +G K+IWL RGL FG ++HD
Sbjct: 172 LTEADVEAEFARTIGAKKVIWLERGLHRDNQTFGTRGHVDIVATMPSPGVVLVHDQRNPE 231
Query: 225 --------EAKPRLAGTRLAA------------------------SYVNFYIANGGIITP 252
E K A A SYVN + NGG+I
Sbjct: 232 HPDHALSEEVKALFANETTADGRPFEVVPIPAPEILKDDEGWVDYSYVNHLVTNGGVIAC 291
Query: 253 QFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
F D D EA +L +P VVG++ ARE+ GG IHCITQQQP++
Sbjct: 292 TF-DDPMDAEAKAILETVYPGRTVVGVD-ARELYARGGGIHCITQQQPSL 339
>gi|448936386|gb|AGE59934.1| agmatine deiminase [Acanthocystis turfacea Chlorella virus
TN603.4.2]
Length = 363
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 177/376 (47%), Gaps = 87/376 (23%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M+M TP G+ MP E+EPH++ +M +P R DNWR++A AQ + +A ISK E
Sbjct: 1 MQMT-TPRQDGFRMPGEFEPHARTFMVFP---HRPDNWRNNAEDAQHAISDLAREISKHE 56
Query: 61 PVTVCASAAQWENARSQLPEN-IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
V + A S L + +++ + W RDTG T V N ++ G
Sbjct: 57 EVVMITPRDCMHKAISLLHDTKVKITAFGSDDCWARDTGATFVSN---------GVELRG 107
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLT 178
I W+FN+WGG DGCY W+ D ++A ++ + + + VLEGGS+HVDG+GTC+T
Sbjct: 108 ISWDFNAWGGHYDGCYTSWNKDSKIADRMCAISNVSTYRTEGFVLEGGSVHVDGDGTCIT 167
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF-----GMIH----------- 222
TEECLL+ RNPHL+KG IE+ LK YL V K++WL G+ G +
Sbjct: 168 TEECLLSGGRNPHLSKGDIEHMLKEYLNVDKVLWLKHGIVDDETNGHVDNMACFARPGEV 227
Query: 223 -----DGEAKPRLAGTRLAASYVN--------------FYIANGGIITPQ---------- 253
D P+ +R A Y++ YI N +T +
Sbjct: 228 ILAWTDNMTHPQYERSRGAYEYLSSQTDAKGRPLKVHKLYIPNDMYVTQEESDGIVRSGH 287
Query: 254 -----FGDKKWDGEAVRVLSQA---FP-----KYEVVGIERAREI--------------V 286
GD+ V+ FP +Y++ +E + I +
Sbjct: 288 ALPRNVGDRLCASYVNFVMPNGAIIFPTFGDDEYDMRALETLKSIFPERVVKGFYSREIL 347
Query: 287 LGGGNIHCITQQQPAI 302
LGGGN+HC+TQQQP +
Sbjct: 348 LGGGNLHCVTQQQPLV 363
>gi|116492004|ref|YP_803739.1| peptidylarginine deiminase-like protein [Pediococcus pentosaceus
ATCC 25745]
gi|116102154|gb|ABJ67297.1| agmatine deiminase [Pediococcus pentosaceus ATCC 25745]
Length = 363
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 132/218 (60%), Gaps = 11/218 (5%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M++ TP G+ +PAE+E ++ +M WP +R DNWR+ Q+ F K+ T ++K++
Sbjct: 1 MKLMSTPRKDGFRLPAEFEFQNEGFMIWP---QRPDNWRNGGKTVQKEFVKLITLLAKYQ 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
P+T+ + +Q++NAR+ LP NIRV+EMS N ++ RDTGP + NK ++ +
Sbjct: 58 PMTMLVNESQYKNARASLPSNIRVLEMSSNDAFIRDTGPLYLKNKQG--------EIRCM 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
+NFN+WGG+ DG Y W D +VA K+ + LEG SI DGEGT +TTE
Sbjct: 110 KFNFNAWGGLLDGLYFPWDKDNEVASKLADLYHQDFYQDDFTLEGCSILTDGEGTLITTE 169
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
E +L++ RN + K E + K +LG+ K+IWLP G F
Sbjct: 170 EVVLSEGRNKGINKQIAEEKFKEFLGIEKVIWLPEGFF 207
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR+ G RL A+YVN+ N II P+FGD D A + L+ +P +V+G A EI+
Sbjct: 291 PRVEGQRLTATYVNYITLNKVIIVPEFGDFN-DKIAQKQLASYYPDRKVIGFA-ANEILT 348
Query: 288 GGGNIHCITQQQPA 301
GGG +H I P
Sbjct: 349 GGGGLHTIVLTMPG 362
>gi|376295827|ref|YP_005167057.1| Agmatine deiminase [Desulfovibrio desulfuricans ND132]
gi|323458388|gb|EGB14253.1| Agmatine deiminase [Desulfovibrio desulfuricans ND132]
Length = 356
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 156/349 (44%), Gaps = 71/349 (20%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
PA G MP EW H WM WP + W + +A+VA AIS+FEPV +
Sbjct: 16 PACDGLFMPGEWAEHEATWMIWPCKPS---AWPFGMDKPRLAYAEVAKAISRFEPVYMMC 72
Query: 67 SAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
A++ + + ++ M SW RD+ PT V++ VAG+DW FN
Sbjct: 73 RPELMAQAKALCGDAVTLVPMDTRDSWARDSAPTFVIDGRGG--------VAGVDWVFND 124
Query: 127 WGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNK 186
WG + + D +A+ +L + R+ ++EGG IH DGEGT LTTE+ +
Sbjct: 125 WGHI---ARYEGKYDEPMAQAVLEHLSMRRYAAPCIIEGGGIHSDGEGTLLTTEQVQFDP 181
Query: 187 NRNPHLTKGQIENELKAYLGVMKIIWLPRGL-------------------FGMIHDG--- 224
RN +KG E AYLG K++WL GL M+HD
Sbjct: 182 RRNAGFSKGDFEALFAAYLGTEKVVWLGNGLEDDETNGHVDILACFVRPGVVMVHDCTDP 241
Query: 225 --------------------------------EAKPRLAGT-RLAASYVNFYIANGGIIT 251
+ PR G R+ SY+NFYIANGGI+
Sbjct: 242 DDANYKVSRDAIQRLETTTDARGRSFEIIRMPQPAPRFNGDWRMDLSYINFYIANGGIVM 301
Query: 252 PQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
F D D A R++ +AFP +EV+ + +I GGG IHCITQQQP
Sbjct: 302 SSF-DDPMDETAYRLMCEAFPGHEVIQLP-CLDIFAGGGGIHCITQQQP 348
>gi|448930146|gb|AGE53712.1| agmatine deiminase [Acanthocystis turfacea Chlorella virus
GM0701.1]
Length = 363
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 122/376 (32%), Positives = 178/376 (47%), Gaps = 87/376 (23%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M+M TP G+ MP E+EPH++ +M +P R DNWR++A AQ+ A +A ISK E
Sbjct: 1 MQMT-TPRQDGFRMPGEFEPHARTFMVFP---HRPDNWRNNAEGAQKAIANLAREISKHE 56
Query: 61 PVTVCASAAQWENARSQLPEN-IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
V + + A S L + +++ + W RDTG T V N + ++ G
Sbjct: 57 EVVMITPWDRVHAAVSLLHDTKVKITAFESDDCWARDTGATFVSNGN---------EIRG 107
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLT 178
I W+FN+WGG DGCY W D ++A ++ + + + VLEGGS HVDG+GTC+T
Sbjct: 108 ISWDFNAWGGHYDGCYTSWDKDDKIADRMCAISNVNTYHTEGFVLEGGSFHVDGDGTCIT 167
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF-----GMIH----------- 222
TEECLL+ RNPHL+KG IE+ LK YL V K++WL G+ G +
Sbjct: 168 TEECLLSGGRNPHLSKGDIEHMLKEYLNVDKVLWLKHGIIDDETNGHVDNMACFARPSEV 227
Query: 223 -----DGEAKPRLAGTRLAASYVN--------------FYIANGGIITPQ---------- 253
D A P+ +R A Y++ +I N +T +
Sbjct: 228 ILAWTDNTAHPQYERSRGAYEYLSSQTDAKGRPLKIHKLHIPNDMHVTQEESDGIVRSGH 287
Query: 254 -----FGDKKWDGEAVRVLSQA---FP-----KYEVVGIERAREI--------------V 286
GD+ V+ FP +Y+ +E + I +
Sbjct: 288 ALPRNVGDRLCASYVNFVMPNGAIIFPTFGDDEYDARALETLKSIFPERVVKGFYSREIL 347
Query: 287 LGGGNIHCITQQQPAI 302
LGGGN+HC+TQQQP +
Sbjct: 348 LGGGNLHCVTQQQPLV 363
>gi|302384816|ref|YP_003820638.1| agmatine deiminase [Clostridium saccharolyticum WM1]
gi|302195444|gb|ADL03015.1| agmatine deiminase [Clostridium saccharolyticum WM1]
Length = 364
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 97/218 (44%), Positives = 125/218 (57%), Gaps = 12/218 (5%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++ PA G+ MP E+EPH C M WP +R +W A A++ FA++A AI+ E
Sbjct: 3 KLKSLPAKDGFYMPGEFEPHWGCIMIWP---KRPGSWPFGAGKARKAFARIAEAIADSEQ 59
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
V + A ENAR L I++ M + +W RD GPT VVNK +V GID
Sbjct: 60 VIMLAEEDVAENAREMLSGRIQIAVMESDDAWARDVGPTFVVNKDR--------RVRGID 111
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHS-MVLEGGSIHVDGEGTCLTTE 180
W FN+WGG DG Y DW D +A + P + VLEGGSIH DGEGT L TE
Sbjct: 112 WQFNAWGGTFDGLYPDWKKDDLLAGRFCERFGYPVYDAGHFVLEGGSIHSDGEGTLLVTE 171
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP LTK QI+ +LK YLG +K+IWL G++
Sbjct: 172 SCLLSPGRNPSLTKLQIQEQLKCYLGAVKVIWLKAGIY 209
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Query: 217 LFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEV 276
L G+ + R AG RLAASYVNFYI+NGG++ PQFGD D EAVR+L + FP+ ++
Sbjct: 282 LTGLSFEPGEDEREAGERLAASYVNFYISNGGVVVPQFGDDH-DSEAVRILGECFPERKI 340
Query: 277 VGIERAREIVLGGGNIHCITQQQP 300
+ AR+I++GGGNIHCITQQ P
Sbjct: 341 YPV-YARDIIVGGGNIHCITQQIP 363
>gi|270291522|ref|ZP_06197743.1| agmatine deiminase [Pediococcus acidilactici 7_4]
gi|270280019|gb|EFA25856.1| agmatine deiminase [Pediococcus acidilactici 7_4]
Length = 363
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 91/218 (41%), Positives = 127/218 (58%), Gaps = 11/218 (5%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M++ P G+ MPAE+E Q M WP +R DNWR+ AQ+ F ++AT I+ ++
Sbjct: 1 MKLTTFPQQDGFWMPAEFESKGQSLMMWP---QRPDNWRNGGKPAQKSFVQLATLIANYQ 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
PVTV + Q++NAR+ LP IRV+EMS N + +DTGP +VN V +
Sbjct: 58 PVTVFVNENQYKNARAMLPTQIRVLEMSNNDVFIKDTGPIELVNADGV--------VRCM 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
D+ FN+WGG+ DG Y W D +V K+ R+ +LEG S+ DGEGT +TTE
Sbjct: 110 DFGFNAWGGLLDGLYFPWDKDQEVTGKLADLFGWDRYQSDFILEGCSVVTDGEGTLITTE 169
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
E +L++ RN +TK Q E + YLG K+IWLP G F
Sbjct: 170 EVVLSEGRNKGITKAQAEEVFQNYLGAQKVIWLPEGFF 207
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G RL A+YVN+ + II P+F D D +A + L+ +P E++G A EI+
Sbjct: 291 PRTEGQRLTATYVNYITLDQAIIFPEFNDLN-DQKARQELANYYPDREIIGFP-ATEILT 348
Query: 288 GGGNIHCITQQQPA 301
GGG +H + P
Sbjct: 349 GGGGLHTVVLNMPG 362
>gi|253581176|ref|ZP_04858434.1| agmatine deiminase [Ruminococcus sp. 5_1_39B_FAA]
gi|251847533|gb|EES75505.1| agmatine deiminase [Ruminococcus sp. 5_1_39BFAA]
Length = 367
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 126/210 (60%), Gaps = 14/210 (6%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
Y MP E+EPH C M WP ER +W A AQ+ F KVA AI E V + S AQ
Sbjct: 11 YRMPGEFEPHEGCVMIWP---ERPGSWNYGAREAQKAFVKVAEAIGVSEKVYMLVSKAQM 67
Query: 72 ENARSQL--PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
ENA++QL + ++E + +W RD G T+V+++ A V G+DW FN+WGG
Sbjct: 68 ENAKNQLGNVSGVTLLECETDDAWARDVGATMVLDEKGA--------VCGVDWQFNAWGG 119
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKNR 188
DG YR+W D +VA I T P VLEGGSIH DGEGT + TE CLL++ R
Sbjct: 120 TFDGLYRNWEKDDRVAAFICRTLGCPCLDARPFVLEGGSIHSDGEGTLIVTEACLLSQGR 179
Query: 189 NPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
NP +++ QIE +LK +LGV KIIWLP G++
Sbjct: 180 NPQMSREQIEEQLKYWLGVHKIIWLPCGIY 209
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G + + R AG R+AASYVNFYI+NGGII PQFGD+ D AV +L + FP+ +
Sbjct: 284 GFVFEEGEDEREAGERMAASYVNFYISNGGIILPQFGDEN-DKRAVEILQKCFPERRIYP 342
Query: 279 IERAREIVLGGGNIHCITQQQPA 301
I+ AR I++GGGNIHCITQQ P
Sbjct: 343 ID-ARAIIVGGGNIHCITQQIPG 364
>gi|345860994|ref|ZP_08813274.1| agmatine deiminase [Desulfosporosinus sp. OT]
gi|344325909|gb|EGW37407.1| agmatine deiminase [Desulfosporosinus sp. OT]
Length = 346
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 161/288 (55%), Gaps = 38/288 (13%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
P Y MPAEW H++ ++ WPV +R + +D +A++ AI++FEPVT+
Sbjct: 3 PINCNYKMPAEWVKHTRTFISWPV--QRSMCYPEDYETVCLGYAEIIKAIAEFEPVTIVM 60
Query: 67 SAAQWENAR--SQLPENIRV--IEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A E + + L +N R+ + + N +W RD GPT +VN +VAG++W
Sbjct: 61 NPADVEESEMLAYLFKNERIEGLAIEHNDAWLRDNGPTFLVNDGG--------EVAGVNW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
+FN+WGG Y W LD QVA +IL+ L RF +V+EGGS+HVDGEGT LTTEEC
Sbjct: 113 HFNAWGGK----YAPWDLDDQVAPQILNFVGLKRFDAPLVMEGGSLHVDGEGTLLTTEEC 168
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNF 242
LLN NRNP LTK QIE ELK +L + K++WL GL G DG +
Sbjct: 169 LLNANRNPELTKEQIEAELKKFLNIRKVVWLKNGLDGDETDGH-----------IDNIAC 217
Query: 243 YIANGGIIT-----PQFGDKKWDGEAVRVLSQAFP----KYEVVGIER 281
++A G I+ P+ + E++R+LS+ K+E++ I++
Sbjct: 218 FVAPGKILIQVCDDPEDANYAITQESLRILSRETDALGRKFEIIPIQQ 265
>gi|326794986|ref|YP_004312806.1| Agmatine deiminase [Marinomonas mediterranea MMB-1]
gi|326545750|gb|ADZ90970.1| Agmatine deiminase [Marinomonas mediterranea MMB-1]
Length = 367
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 116/350 (33%), Positives = 167/350 (47%), Gaps = 77/350 (22%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDAL-HAQRVFAKVATAISKFEPVTVCASAAQ 70
++MP E +PH + WM + D W + L QR A +A +I+++EPV++ +
Sbjct: 36 WVMPDESDPHLRTWMAFGASR---DIWGHELLFEVQRNLATIALSIAQYEPVSMLVRQSD 92
Query: 71 WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
AR + + +I ++ W RD+GP VV KS A +D+NFN WG
Sbjct: 93 LALARRLMGNKVDLIVSPLDDLWIRDSGPVFVVTKSGDK--------AAVDFNFNGWGD- 143
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
+D+ D +VA + +PR +VLEGG I VDG GT + TE C+LN+NRNP
Sbjct: 144 ----KQDYEHDAKVAAFVARNADVPRILTDLVLEGGGIEVDGHGTAIITESCVLNENRNP 199
Query: 191 HLTKGQIENELKAYLGVMKIIWLPRGLFGM-IHDGE-------AKPRL------------ 230
++K + E ELK LG+ KIIWLP G+ G I DG A+P +
Sbjct: 200 GVSKRECEQELKRLLGLNKIIWLP-GIKGKDITDGHTDFYARFARPGVVVVGYDPDPYSF 258
Query: 231 -----------------------------AGTRLAASY---------VNFYIANGGIITP 252
A TR+ Y +N+Y+ NG +I P
Sbjct: 259 DHAVTKRHLEILRKATDAKGRKLEIITLEAPTRIREEYASDDFAAGYINYYVCNGAVIAP 318
Query: 253 QFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
+FGD + D A R L +AFP+ +V+ I I GGG IHC TQQ+P +
Sbjct: 319 EFGDPRTDAAAKRQLQKAFPERDVIQIN-IDAIAAGGGGIHCTTQQEPRV 367
>gi|253574035|ref|ZP_04851377.1| agmatine deiminase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251846512|gb|EES74518.1| agmatine deiminase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 381
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 163/357 (45%), Gaps = 77/357 (21%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
P Y MPAEW PH + ++ WPV+ + + D +A+ TAI++FEP+TV
Sbjct: 37 PKDLNYKMPAEWAPHERTFISWPVQASMV--YPDRYAEVCDGYAEFITAIAEFEPITVVV 94
Query: 67 SAAQWENARSQLP-----ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
+ +++ E I + + N +W RD GPT +VN ++AG++
Sbjct: 95 NPNDLPQVKARFAQDPNTERISFMPIEHNDAWLRDNGPTFLVNPEG--------ELAGVN 146
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
W FN+WGG Y W LD VA +IL + RF +VLEGGSIH DGEGT LTTEE
Sbjct: 147 WRFNAWGGK----YSPWDLDDAVAPQILEALNVKRFDAPLVLEGGSIHTDGEGTLLTTEE 202
Query: 182 CLLNKNRNPH---------------------LTKGQIENELKAYLGVMKIIWLPRGLFGM 220
CLLN+NRNP L +G +E ++ + P +
Sbjct: 203 CLLNENRNPQLSREEIEAAVKNYVNVDQIIWLKRGLDGDETDGHIDNVACFAAPGKVILQ 262
Query: 221 IHDGEAKPRLAGT----------------------------------RLAASYVNFYIAN 246
+ D + A T RL SY+NFY N
Sbjct: 263 VCDDPSDENYAITQENIAILSAATDAQGRKLEIIPIPQPPKAFYEDSRLTLSYLNFYFVN 322
Query: 247 GGIITPQFGD--KKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
GGII P FG + D +A++VLS FP ++ ++ I+ GGN+HC TQQ A
Sbjct: 323 GGIILPIFGGAAEATDRKAIQVLSDTFPDRKIRTVD-GMAIIREGGNVHCTTQQMAA 378
>gi|390453688|ref|ZP_10239216.1| Agmatine deiminase [Paenibacillus peoriae KCTC 3763]
Length = 343
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 171/349 (48%), Gaps = 73/349 (20%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
Y MP EW H + ++ WPV+ + + D + +A + A+++FEPVTV + A
Sbjct: 8 YKMPPEWASHERTYISWPVQSSMV--YPDMHAAVCKGYAGIVRAMAEFEPVTVVVNPADL 65
Query: 72 ENARS-QLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
E+ ++ +L E + ++ + + +W RD GPT + N+ ++AG++W FN+WGG
Sbjct: 66 ESVQALELGERVELLPIEHSDAWLRDNGPTFLTNEHG--------QLAGVNWKFNAWGGK 117
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
Y W LD QVA +IL +PRF +V+EGGS+HVDGEGT +TTEECLLN NRNP
Sbjct: 118 ----YAPWDLDDQVAPQILDKLGIPRFDAPLVMEGGSLHVDGEGTLITTEECLLNPNRNP 173
Query: 191 H---------------------LTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG----- 224
L +G +E ++ + P + + D
Sbjct: 174 ELSREDIEKYVCEYTGAEKIIWLKRGLSGDETDGHVDNIACFAAPGKVIMQVCDDPEDEN 233
Query: 225 ---------------EAK------------PRL--AGTRLAASYVNFYIANGGIITPQFG 255
+AK PR+ +RL SY+NFY NGGII P FG
Sbjct: 234 YEITQENLRILEQATDAKGRKLEVIRIGQPPRVDYEDSRLTLSYINFYFVNGGIILPVFG 293
Query: 256 DK--KWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
+ D A +VL++ FP + ++ ++ GGN+HC TQQ PA+
Sbjct: 294 GTAAESDLAAQQVLAKVFPDRTIRTVD-GMAVIREGGNVHCTTQQMPAV 341
>gi|418068443|ref|ZP_12705726.1| peptidylarginine deiminase-like protein [Pediococcus acidilactici
MA18/5M]
gi|357539551|gb|EHJ23569.1| peptidylarginine deiminase-like protein [Pediococcus acidilactici
MA18/5M]
Length = 363
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 91/218 (41%), Positives = 127/218 (58%), Gaps = 11/218 (5%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M++ P G+ MPAE+E Q M WP +R DNWR+ AQ+ F ++AT I+ ++
Sbjct: 1 MKLTTFPQQDGFWMPAEFESKGQSLMMWP---QRPDNWRNGGKPAQKSFVQLATLIANYQ 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
PVTV + Q++NAR+ LP IRV+EMS N + +DTGP +VN V +
Sbjct: 58 PVTVFVNENQYKNARAMLPTQIRVLEMSNNDVFIKDTGPIELVNADGV--------VRCM 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
D+ FN+WGG+ DG Y W D +V K+ R+ +LEG S+ DGEGT +TTE
Sbjct: 110 DFGFNAWGGLLDGLYFPWDKDQEVTGKLADLFGWDRYQSDFILEGCSVVTDGEGTLITTE 169
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
E +L++ RN +TK Q E + YLG K+IWLP G F
Sbjct: 170 EVVLSEGRNKGITKAQAEAVFQNYLGAQKVIWLPEGFF 207
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G RL A+YVN+ + II P+F D D +A + L+ +P E++G A EI+
Sbjct: 291 PRTEGQRLTATYVNYITLDQAIIFPEFNDLN-DQKARQELANYYPDREIIGFP-ATEILT 348
Query: 288 GGGNIHCITQQQPA 301
GGG +H + P
Sbjct: 349 GGGGLHTVVLNMPG 362
>gi|155122452|gb|ABT14320.1| hypothetical protein MT325_M766L [Paramecium bursaria chlorella
virus MT325]
Length = 363
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 121/212 (57%), Gaps = 13/212 (6%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
P+ G+ MP E+E HS WM +P R DNWRDDA AQ +A + K+E VT+
Sbjct: 9 PSEDGFRMPGEFEKHSGTWMIFP---HRPDNWRDDAFAAQEQLCALANLVGKYEKVTMLV 65
Query: 67 SAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
A + ++ +I + +W RDTG VVN +V G+ ++FN+
Sbjct: 66 PRRYVRRALGLVSTDVSIIVKDTDDAWMRDTGAVFVVN---------GKEVRGVSFDFNA 116
Query: 127 WGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTEECLLN 185
WGG DG Y+ W LD +V + + + VLEGGS+HVDGEGT +TTEECLL+
Sbjct: 117 WGGDIDGLYQSWDLDAEVGKYMCKARGFKMYTTPGFVLEGGSVHVDGEGTLITTEECLLS 176
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
RNPHLT+ +IE LK YLGV KI+WLP G+
Sbjct: 177 AGRNPHLTRDEIETNLKMYLGVEKIVWLPYGI 208
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 92/174 (52%), Gaps = 20/174 (11%)
Query: 146 RKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIENE-L 201
+ L E++ P+ +V + + HVD E +L + ++P + + E L
Sbjct: 193 KMYLGVEKIVWLPYGIVDDETNGHVDNMCCFARPGEVMLAWTDDKKHPQYERSKAAYEVL 252
Query: 202 KAYLG------VMKIIWLPRGLFGMIHDGEAK-------PRLAGTRLAASYVNFYIANGG 248
K L V+ I +P+ ++ I EA PR G RLA+SY+NF + NG
Sbjct: 253 KTTLDAKGRKFVIHKIHIPKDMY--ITHIEANGVVQGHTPRTVGDRLASSYINFIMPNGA 310
Query: 249 IITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
II P FGD ++D A + + FP+ E++G +RE +LGGGN+HC+TQQQP++
Sbjct: 311 IIYPTFGDDEYDSLAHKKFEEIFPEREIIGF-YSREFLLGGGNMHCLTQQQPSV 363
>gi|304386014|ref|ZP_07368355.1| agmatine deiminase [Pediococcus acidilactici DSM 20284]
gi|304327937|gb|EFL95162.1| agmatine deiminase [Pediococcus acidilactici DSM 20284]
Length = 363
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 91/218 (41%), Positives = 127/218 (58%), Gaps = 11/218 (5%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M++ P G+ MPAE+E Q M WP +R DNWR+ AQ+ F ++AT I+ ++
Sbjct: 1 MKLTTFPQQDGFWMPAEFESKGQSLMMWP---QRPDNWRNGGKPAQKSFVQLATLIANYQ 57
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
PVTV + Q++NAR+ LP IRV+EMS N + +DTGP +VN V +
Sbjct: 58 PVTVFVNENQYKNARAMLPTQIRVLEMSNNDVFIKDTGPIELVNADGV--------VRCM 109
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
D+ FN+WGG+ DG Y W D +V K+ R+ +LEG S+ DGEGT +TTE
Sbjct: 110 DFGFNAWGGLLDGLYFPWDKDQEVTGKLADLFGWDRYQSDFILEGCSVVTDGEGTLITTE 169
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
E +L++ RN +TK Q E + YLG K+IWLP G F
Sbjct: 170 EVVLSEGRNKGITKAQAEAVFQNYLGAQKVIWLPEGFF 207
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G RL A+YVN+ + II P+F D D +A + L+ +P E++G A EI+
Sbjct: 291 PRTEGQRLTATYVNYITLDQAIIFPEFNDLN-DQKARQELANYYPDREIIGFP-ATEILT 348
Query: 288 GGGNIHCITQQQPA 301
GGG +H + P
Sbjct: 349 GGGGLHTVVLNMPG 362
>gi|289625864|ref|ZP_06458818.1| agmatine deiminase [Pseudomonas syringae pv. aesculi str. NCPPB
3681]
Length = 307
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/163 (54%), Positives = 111/163 (68%), Gaps = 10/163 (6%)
Query: 64 VCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ SAAQ++ AR++L NIRV+EMS N +W RD+GPT V+N +V G++W
Sbjct: 1 MAVSAAQYDTARARLDMPNIRVVEMSSNDAWVRDSGPTFVINDRG--------EVRGVNW 52
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG D G Y W+LD Q+ K+L ER PR+ VLEGGSIHVDGEGT +TTEE
Sbjct: 53 EFNAWGGFDGGLYAPWNLDSQLGSKVLEIERCPRYVTEGFVLEGGSIHVDGEGTLITTEE 112
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
CLLN+NRNPHLT+ QIE L YL V K++WLP GLF DG
Sbjct: 113 CLLNRNRNPHLTREQIEAILGDYLAVDKVVWLPDGLFNDETDG 155
>gi|29342789|gb|AAO80553.1| conserved hypothetical protein [Enterococcus faecalis V583]
Length = 337
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/193 (47%), Positives = 115/193 (59%), Gaps = 12/193 (6%)
Query: 26 MGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVI 85
M WP ER DNWRD Q F VA AIS+F P+ V S Q++N R QLP I V
Sbjct: 1 MIWP---ERPDNWRDGGKPVQEAFTNVAKAISQFTPMNVVVSQQQFQNCRRQLPPEITVY 57
Query: 86 EMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDLQVA 145
EMS N +W RD GP+ V+N ++ G+DW FN+WGG+ DG Y W D VA
Sbjct: 58 EMSNNDAWVRDCGPSFVINDHG--------EIRGVDWTFNAWGGLVDGLYFPWDQDDLVA 109
Query: 146 RKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAY 204
+KI E + + VLEGGS HVDG+GT LTTE CLL++ RNP L+K IE +L Y
Sbjct: 110 QKICEIEHVDSYRTDDFVLEGGSFHVDGQGTVLTTEMCLLSEGRNPQLSKEAIEQKLCDY 169
Query: 205 LGVMKIIWLPRGL 217
L V K++WL G+
Sbjct: 170 LNVEKVLWLGDGI 182
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 215 RGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKY 274
+G F + PR G ASY+NF I N G+I PQ+GD+ D A+ + FP
Sbjct: 252 KGSFKIDFVEGTMPREDGDICIASYMNFLITNDGVIVPQYGDEN-DHLALEQVQTMFPDK 310
Query: 275 EVVGIERAREIVLGGGNIHCITQQQP 300
++VG+ E+V GGGNIHCITQQ+P
Sbjct: 311 KIVGVNTV-EVVYGGGNIHCITQQEP 335
>gi|254383245|ref|ZP_04998598.1| agmatine deiminase [Streptomyces sp. Mg1]
gi|194342143|gb|EDX23109.1| agmatine deiminase [Streptomyces sp. Mg1]
Length = 344
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/355 (32%), Positives = 167/355 (47%), Gaps = 73/355 (20%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
PA +G+ MPAEW PH + WM WP + R+ A A+ + VA A+ +EPVT+
Sbjct: 4 PAANGFRMPAEWTPHERTWMAWPSPNPTFTDERELA-EAREAWGAVARAVRAYEPVTLVV 62
Query: 67 SAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
S E AR+ + E++ ++E ++ +W RD GPT V N + ++A +DW FN
Sbjct: 63 SPGDAEGARAIVGEDVALVEQELDDAWMRDIGPTFVTNGAG--------ELAAVDWTFNG 114
Query: 127 WGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNK 186
WG + + W D ++AR + F +V EGG+IHVDGEGT L T+ L +
Sbjct: 115 WGAQE---WARWDHDAKIARHVSDLAGTRTFSTPLVNEGGAIHVDGEGTVLLTDTVQLGQ 171
Query: 187 NRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG-----------------------MIH- 222
RNP T+ ++E E+ A+LG K IWLP GL G M+H
Sbjct: 172 GRNPGWTREEVEAEIHAHLGTTKAIWLPYGLAGDYGTYGTQGHVDIVAAFARPGVVMVHS 231
Query: 223 ---------------------DGEAKPRL-------AGTRLAAS--YVNFYIAN-----G 247
+A RL A T L A +V++ N
Sbjct: 232 QPDPAHPDHERCKTIAAVLRASTDAHGRLLEVVEIPAPTVLEADGEWVDYSYINHYLCND 291
Query: 248 GIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
G++ F D + D EA + FP+ V ++ AR I GGG IHCITQQQP +
Sbjct: 292 GVVLCAFDDPR-DEEAAEIFRGLFPERTVTLVD-ARTIFAGGGGIHCITQQQPKV 344
>gi|448925752|gb|AGE49331.1| agmatine deiminase [Acanthocystis turfacea Chlorella virus Br0604L]
Length = 361
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 128/215 (59%), Gaps = 14/215 (6%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+EPH++ +M +P R DNWR++A +AQ A +A ISK+E V +
Sbjct: 3 TPRQDGFRMPGEFEPHARTFMVFP---HRPDNWRNNAKNAQHAIADLAREISKYEEVVMI 59
Query: 66 ASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
A S L + N+++ + W RDTG T V N + ++ GI W+F
Sbjct: 60 TPREHMYTAVSLLHDTNVKITVFDSDDCWTRDTGATFVSNGN---------ELRGISWDF 110
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECL 183
N+WGG DGCY W D ++A ++ + + VLEGGS+HVDG+GTC+TTEECL
Sbjct: 111 NAWGGHYDGCYTSWDKDSKIAGRMCAVANASVYRTEGFVLEGGSVHVDGDGTCITTEECL 170
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
L+ RNPHL+KG IE+ LK YL V K++WL G+
Sbjct: 171 LSGGRNPHLSKGDIEHILKEYLNVDKVLWLKHGII 205
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G++ G A PR G RL ASYVNF + NG II P FGD ++D A+ L FP+ V G
Sbjct: 279 GIVRSGHALPRNVGDRLCASYVNFVMPNGAIIFPTFGDDEYDMRALETLKSIFPERVVKG 338
Query: 279 IERAREIVLGGGNIHCITQQQPAI 302
+REI+LGGGN+HC+TQQQP +
Sbjct: 339 F-YSREILLGGGNLHCVTQQQPLV 361
>gi|339444436|ref|YP_004710440.1| peptidylarginine deiminase [Eggerthella sp. YY7918]
gi|338904188|dbj|BAK44039.1| peptidylarginine deiminase [Eggerthella sp. YY7918]
Length = 386
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 132/228 (57%), Gaps = 23/228 (10%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
E TP GY MP E+EP ++ WM WP R D W A AQ+ +A+VA I++FEP
Sbjct: 6 ESASTPKADGYRMPGEFEPQTRVWMAWP---HRTDTWAWGAKPAQKQYAEVARTIAQFEP 62
Query: 62 VTVCASAAQWENARSQLP--ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
VT+C + + NA++ EN+ VIEM+ + +W RDTG T VVN
Sbjct: 63 VTMCVNQVDYANAKAVFEDDENVTVIEMTTDDAWVRDTGATWVVNDEGDKRA-------- 114
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLT 178
+ W+FN++GG ++G Y W D Q+A K+ R+ P S++LEGGSIHVDGEGT +T
Sbjct: 115 VHWHFNAYGGFENGLYFPWDKDEQIALKMAEMSGCRRYRPESLILEGGSIHVDGEGTVVT 174
Query: 179 TEECLLNKNRNPHLT---------KGQIENELKAYLGVMKIIWLPRGL 217
T+ CLL+ RN +T + ++ ELK YLGV K+IW+ G+
Sbjct: 175 TDMCLLDPGRNASVTDYEPWSEELRAYMDEELKKYLGVEKVIWVKDGI 222
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 55/82 (67%), Gaps = 8/82 (9%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPK------YEVVGI 279
A+PR+A L ASY+NF I NGG+I PQ+GD+ D AV + AF + Y+ VG+
Sbjct: 305 AEPRVADEPLIASYMNFLIVNGGVIVPQYGDEN-DALAVEQIQAAFDEAWGKGVYKAVGV 363
Query: 280 ERAREIVLGGGNIHCITQQQPA 301
+ ++V GGGNIHCITQQ+PA
Sbjct: 364 -KTDQVVYGGGNIHCITQQEPA 384
>gi|359766377|ref|ZP_09270189.1| hypothetical protein GOPIP_038_00110 [Gordonia polyisoprenivorans
NBRC 16320]
gi|378718172|ref|YP_005283061.1| agmatine deiminase AguA [Gordonia polyisoprenivorans VH2]
gi|359316213|dbj|GAB23022.1| hypothetical protein GOPIP_038_00110 [Gordonia polyisoprenivorans
NBRC 16320]
gi|375752875|gb|AFA73695.1| agmatine deiminase AguA [Gordonia polyisoprenivorans VH2]
Length = 343
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/350 (33%), Positives = 162/350 (46%), Gaps = 71/350 (20%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+ MPAE H + WM +P L DA A ++ VA +S+FEPVTV +
Sbjct: 3 WTMPAETARHDRVWMAFPRANTTLAESAADAETAYAAWSTVANTVSEFEPVTVVVDPTET 62
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
AR+ L + +IE ++ +W RD GPT V + A +A +DW FN WG +
Sbjct: 63 SRARTMLTAAVDIIEAELDDAWMRDIGPTFVTDG--------AGHLAAVDWTFNGWGAQE 114
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ +W D ++ R + +P +V EGG+IHVDGEGT L TE L+ RNP+
Sbjct: 115 ---WAEWDNDRRIGRVVAEAAGVPVISSMLVQEGGAIHVDGEGTVLVTETVQLDPGRNPY 171
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIHDG---- 224
TK +E EL +G +IWLPRGL FG ++H
Sbjct: 172 ATKETVEAELARTIGAHNVIWLPRGLTRDYERFGTRGHVDMVATIPSPGTLLLHQQPNPE 231
Query: 225 --------EAKPRLAGTRLAA------------------------SYVNFYIANGGIITP 252
E + LAGT AA SY+N + N G+I
Sbjct: 232 HPDHVVMRELRDFLAGTTDAAGRQWDIVDLPAPDAIRDETGFVDYSYINHLVVNDGVIAC 291
Query: 253 QFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
+G+ D A +L+ +P VV I+ AREI+ GG IHCITQQQP++
Sbjct: 292 GYGEPAADERAAEILASVYPGRRVVTID-AREILARGGGIHCITQQQPSV 340
>gi|313106201|ref|ZP_07792454.1| putative peptidylarginine deiminase [Pseudomonas aeruginosa 39016]
gi|421169248|ref|ZP_15627276.1| putative peptidylarginine deiminase [Pseudomonas aeruginosa ATCC
700888]
gi|310878956|gb|EFQ37550.1| putative peptidylarginine deiminase [Pseudomonas aeruginosa 39016]
gi|404527046|gb|EKA37229.1| putative peptidylarginine deiminase [Pseudomonas aeruginosa ATCC
700888]
Length = 346
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/354 (36%), Positives = 169/354 (47%), Gaps = 78/354 (22%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERL---DNWRDDALHAQRVFAKVATAISKFEPVTVCAS 67
G+ MPAEW PH+ WM +P + R+ W Q+ FA VA AI++FEPV +
Sbjct: 7 GWRMPAEWTPHAATWMAFP--HNRMLWESEWGVSLADVQQDFAAVANAIARFEPVKLVVD 64
Query: 68 AAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSW 127
A + A N+ +IE++++ SW RD+GP+ V + +AG+ W FN+W
Sbjct: 65 PAALDRAGELCAGNVELIELAIDDSWCRDSGPSFVCHPQLG--------LAGVSWRFNAW 116
Query: 128 GGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
GG ++ D +AR+IL L F + EGG+IHVDGEGT +TTE LLN N
Sbjct: 117 GG-----KSAYAQDASLARRILDGLGLECFGVPLANEGGAIHVDGEGTLITTESVLLNAN 171
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWL---PRGLFGMIHDGE-------AKP---RLAGTR 234
RNP L+K +IE LGV + IWL P + G + DG A+P L TR
Sbjct: 172 RNPGLSKAEIEALFARLLGVTRTIWLPGDPDRVTGDMTDGHVDGVCAFARPGALLLDATR 231
Query: 235 ---------------------------------------------LAASYVNFYIANGGI 249
ASY NFYIANG I
Sbjct: 232 DTTSAYAEVVRENRRALELALDARGRRFELIELFDAGEVAPEEGVFCASYTNFYIANGAI 291
Query: 250 ITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIP 303
I P +G D A L++AFP EVV + R + GGG +HCITQQQPA P
Sbjct: 292 IMPAYGVAA-DDAAAATLARAFPAREVVPV-RIDHLAHGGGGVHCITQQQPAWP 343
>gi|397735962|ref|ZP_10502648.1| agmatine deiminase [Rhodococcus sp. JVH1]
gi|396928255|gb|EJI95478.1| agmatine deiminase [Rhodococcus sp. JVH1]
Length = 340
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/348 (33%), Positives = 164/348 (47%), Gaps = 72/348 (20%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAE E H + WM +P L + ++ A+ +A+VA A+++FEPVTV Q
Sbjct: 5 MPAEGELHERTWMAYPSEGYALGDTPEEHHEARTTWAEVAHAVARFEPVTVVVDPGQVSA 64
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
A+ LP +I ++E +N +W RD GPT V+++ ++ G+DW FN WGG D
Sbjct: 65 AKEYLPADIDIVEAPLNDAWMRDIGPTFVLSEDG--------RLGGVDWIFNGWGGQD-- 114
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ W D ++ ++ +V EGG I VDG GT L TE L+ RNP L+
Sbjct: 115 -WAQWDKDSKIGALVVERSGAELVDSPIVNEGGGIQVDGLGTVLVTETVQLDPGRNPELS 173
Query: 194 KGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIHD------- 223
K IE EL +G K+IWLPRGL +G ++HD
Sbjct: 174 KADIEAELARTIGATKVIWLPRGLTRDQDTYGTRGHVDIVAAIPSPGVVLVHDQRNPEHP 233
Query: 224 -------------------GEA-----KPRLAGTRLAASYVNF-----YIANGGIITPQF 254
GE+ P R +V++ ++ NGG+I F
Sbjct: 234 DFEVSKAVIDLLKQTTDARGESWEIITVPAPTVLRDEEGFVDYSYINHFVVNGGVIACSF 293
Query: 255 GDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
D D EAV +LS A+P VV ++ AR + GG IHCITQ QPA+
Sbjct: 294 DDPA-DEEAVAILSAAYPGRTVVSVD-ARPLFARGGGIHCITQHQPAV 339
>gi|433458683|ref|ZP_20416583.1| peptidylarginine deiminase [Arthrobacter crystallopoietes BAB-32]
gi|432192953|gb|ELK49749.1| peptidylarginine deiminase [Arthrobacter crystallopoietes BAB-32]
Length = 347
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/349 (34%), Positives = 164/349 (46%), Gaps = 70/349 (20%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQ 70
G+ MPAE S+ WM +P L + ++A A+ +A VA AI +F+PVT+ A
Sbjct: 2 GWTMPAETAEQSRIWMAFPPGGYTLGDTEEEAHAARSTWAAVANAIVEFQPVTMLAEPKD 61
Query: 71 WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
E AR+ L + + ++ +W RD GPT V N + ++ +DW FN WG
Sbjct: 62 AETARTYLSPAVELELAPLDDAWMRDIGPTFVFNNDDGA------RLGAVDWVFNGWGQQ 115
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
D + W D ++A +I R +V EGG I VDGEGT L TE L+ +RNP
Sbjct: 116 D---WARWDKDARIAARIAGLAGAERIGSFLVNEGGGIQVDGEGTVLVTETVQLDPHRNP 172
Query: 191 HLTKGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIH--DGE 225
LTK +E EL LG K+IWLPRGL FG ++H D
Sbjct: 173 GLTKDGVEAELARTLGATKVIWLPRGLTRDSERFGTRGHVDIVAAIPSPGTVLVHSQDNP 232
Query: 226 AKPR----------LAGTRLAA------------------------SYVNFYIANGGIIT 251
P LAGT AA SY+N + NG +I
Sbjct: 233 EHPDYEVSREIIACLAGTTDAAGRDWNIIEVPAPQTLRDDEGFVDYSYINHLVINGAVIA 292
Query: 252 PQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
F D D +A+ +L+ A+P +VG++ ARE+ GG IHCITQQQP
Sbjct: 293 CTFNDPA-DEKALAILANAYPGRRIVGVD-ARELFARGGGIHCITQQQP 339
>gi|238917345|ref|YP_002930862.1| agmatine deiminase [Eubacterium eligens ATCC 27750]
gi|238872705|gb|ACR72415.1| agmatine deiminase [Eubacterium eligens ATCC 27750]
Length = 373
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 134/217 (61%), Gaps = 5/217 (2%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N TPA G+ MPAE+E H C M WP ER +W A A++ FA++A+ IS+ E V
Sbjct: 4 INSTPAADGFRMPAEFERHQGCIMIWP---ERPGSWAYGAKAAKKAFAQIASVISESEQV 60
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ S + E A LPE +R++ M + +W RDTGPT VV+ + + +A + GI+W
Sbjct: 61 YMIVSEGRKEEAAKMLPETVRLVVMDTDDAWARDTGPTFVVS-GNVDTPYEARDLRGINW 119
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHS-MVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y W D VA + +S + + VLEGGSIH DGEGT L TE
Sbjct: 120 EFNAWGGTYDGLYAAWDNDNLVAGQFMSYLGCQGYNAAPFVLEGGSIHTDGEGTMLVTES 179
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+K RNP L++ QIEN+LK Y V KIIWLP G++
Sbjct: 180 CLLSKGRNPQLSREQIENKLKQYCNVSKIIWLPCGIY 216
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R AG RLAASYVNFYIAN +I PQF D+ D A+ VL +AFP ++VGI AR+I++G
Sbjct: 301 REAGERLAASYVNFYIANDSVIVPQFDDEA-DSLAINVLKEAFPDRKIVGI-YARDIIVG 358
Query: 289 GGNIHCITQQQPAI 302
GGNIHCITQQ P +
Sbjct: 359 GGNIHCITQQIPEV 372
>gi|381204965|ref|ZP_09912036.1| Agmatine deiminase [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 346
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 168/349 (48%), Gaps = 76/349 (21%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAEW H CW+ WP R ++A + A VA +I+ E V + +E
Sbjct: 1 MPAEWALHQCCWIAWPCREATFHGRFEEA---KTDVAAVARSIASAEKVKLLVRETDFEE 57
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV--- 130
A ++ ++ ++ SW RD+GP+ V+NK ++AG+DW FN++G +
Sbjct: 58 ATQLCGPTVKFVKFELSDSWTRDSGPSFVLNK--------LHELAGVDWYFNAYGSLPLQ 109
Query: 131 DDGC---YRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
+DG +++ D +A++IL +E++ R +VLEGGSIHV+G GT LTTE+CLL +
Sbjct: 110 EDGSPVSDPEFANDQTLAKRILESEKIFRLVAPLVLEGGSIHVNGSGTLLTTEQCLL--S 167
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLPRGL------------------------------ 217
RN T+ +IE L +LG+ K IWL GL
Sbjct: 168 RNSGKTQLEIEGLLSEFLGISKTIWLGEGLQDDETNGHVDNLACFVKERVVLALNCEDSN 227
Query: 218 ---FGMIHDGEAKPRLA-----------------------GTRLAASYVNFYIANGGIIT 251
+ ++ D + RLA G RL+ SY+NFY+ANG +I
Sbjct: 228 DPNYELLKDNLRRLRLATDAQGRLLEVFTINQPAAAFRRNGDRLSQSYLNFYLANGAVIC 287
Query: 252 PQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
P FG D A+ L F V+ + + ++ GGG IHCITQQQP
Sbjct: 288 PAFGYSTEDEAALEQLKCLFSNRRVIQVPISN-LIHGGGGIHCITQQQP 335
>gi|448929440|gb|AGE53008.1| agmatine deiminase [Paramecium bursaria Chlorella virus CZ-2]
Length = 363
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 120/212 (56%), Gaps = 13/212 (6%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
P+ G+ MP E+E HS WM +P R DNWRDDA AQ +A + K+E VT+
Sbjct: 9 PSEDGFRMPGEFEKHSGTWMIFP---HRPDNWRDDAFAAQEQLCALANLVGKYEKVTMLV 65
Query: 67 SAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
A + ++ +I + +W RDTG VVN +V G+ ++FN+
Sbjct: 66 PRRYVRRALGLVSTDVSIIVKDTDDAWMRDTGAVFVVN---------GKEVRGVSFDFNA 116
Query: 127 WGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTEECLLN 185
WGG DG Y+ W LD +V + + + VLEGGS+HVDGEGT +TTEECLL+
Sbjct: 117 WGGDIDGLYQSWDLDAEVGKYMCKARGFKMYTTPGFVLEGGSVHVDGEGTLITTEECLLS 176
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
RNP LT+ +IE LK YLGV KI+WLP G+
Sbjct: 177 AGRNPRLTRDEIETNLKMYLGVEKIVWLPYGI 208
>gi|294631564|ref|ZP_06710124.1| agmatine deiminase [Streptomyces sp. e14]
gi|292834897|gb|EFF93246.1| agmatine deiminase [Streptomyces sp. e14]
Length = 349
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 154/348 (44%), Gaps = 75/348 (21%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAEW PH + WM WP D ++ A+ +A VA AI +FEPVTV Q
Sbjct: 1 MPAEWTPHERTWMAWPGPNPTFDT-AEEVAEARAAWASVARAIRRFEPVTVVCGPGQSAE 59
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
AR+ L ++ +E ++ +W RD GPT + N + ++A +DW FN WG D
Sbjct: 60 ARALLGADVETVERDLDDAWMRDIGPTFLTNDAG--------ELAAVDWTFNGWGAQD-- 109
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ W D ++ + + +V EGG+IHVDGEGT L TE L RNPH T
Sbjct: 110 -WARWEHDSKIGAYVADLAGARTYASKLVNEGGAIHVDGEGTVLLTETVQLGPERNPHWT 168
Query: 194 KGQIENELKAYLGVMKIIWLPR-------------------------------------- 215
K Q+E E+ A+LG K IWLPR
Sbjct: 169 KEQVEAEIHAHLGTEKAIWLPRGLTGDYPPYGYGTLGHVDIVAAFARPGVVVAHHQPDPA 228
Query: 216 -----------GLFGMIHDGEAKPR-----LAGTRLAA-------SYVNFYIANGGIITP 252
GL D + +P A T L A SY+N Y+ N +I
Sbjct: 229 HPDHEVTKEVIGLLRSATDAQGRPLEVVEIAAPTALEADGHWADYSYINHYLCNDAVILC 288
Query: 253 QFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
F D + D EA + FP + V + AR I GGG IHCITQQQP
Sbjct: 289 AFDDPR-DEEAAATFRRLFP-HRTVTLVDARTIFAGGGGIHCITQQQP 334
>gi|402573534|ref|YP_006622877.1| peptidylarginine deiminase-like protein [Desulfosporosinus meridiei
DSM 13257]
gi|402254731|gb|AFQ45006.1| peptidylarginine deiminase-like enzyme [Desulfosporosinus meridiei
DSM 13257]
Length = 347
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 130/219 (59%), Gaps = 15/219 (6%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
P + Y MP EW H++ ++ WP++ DA+ ++++ AIS+FEPVTV
Sbjct: 3 PNILNYKMPPEWSEHARTFISWPIKTSMCYPEEYDAVCEG--YSEIIRAISEFEPVTVLV 60
Query: 67 SAAQWENARSQL-PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
+A + + +L + + ++ + N +W RD GPT V+++ +AG++W FN
Sbjct: 61 NANDYRSVSGKLGSKRVEILSVEHNDAWLRDNGPTFVISEDG--------DIAGVNWRFN 112
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WG Y W LD +A K+L+ L +F +V+EGGS HVDGEGT LTTE+CLLN
Sbjct: 113 AWGEK----YAPWDLDDLLAAKVLNHLGLKQFDAPLVMEGGSFHVDGEGTLLTTEQCLLN 168
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
NRNPHLTK QIE EL YL + K+IWL RGL G DG
Sbjct: 169 ANRNPHLTKDQIEAELMKYLNIRKVIWLKRGLDGDETDG 207
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 230 LAGTRLAASYVNFYIANGGIITPQFGDK--KWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
++ TRL SY+NFY N GII P FG + + D AV VL++AFP+ + + I+
Sbjct: 270 VSKTRLTLSYLNFYFVNEGIILPVFGGEANRTDELAVEVLNKAFPQRRIRRV-NGMGIIR 328
Query: 288 GGGNIHCITQQQPA 301
GGN+HC TQQ PA
Sbjct: 329 EGGNVHCTTQQMPA 342
>gi|392424514|ref|YP_006465508.1| peptidylarginine deiminase-like enzyme [Desulfosporosinus
acidiphilus SJ4]
gi|391354477|gb|AFM40176.1| peptidylarginine deiminase-like enzyme [Desulfosporosinus
acidiphilus SJ4]
Length = 347
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 129/219 (58%), Gaps = 15/219 (6%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
P Y MPAEW H + ++ WPVR +D + ++++ AI++FEP++V A
Sbjct: 3 PIDLNYRMPAEWSEHRRTFISWPVRESMCH--PEDYETVCKGYSEIIKAIAEFEPISVIA 60
Query: 67 SAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
+ + + E I ++ + N +W RD GPT +VN +AG++W FN
Sbjct: 61 NPSDSKTLSLGFADERIEILVIEHNDAWLRDNGPTFLVNDLG--------NLAGVNWRFN 112
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WGG Y+ W LD QVA ++L + RF V+EGGS HVDGEGT LTTEECLLN
Sbjct: 113 AWGGK----YKPWDLDDQVAARLLEFLEVRRFDAPFVMEGGSFHVDGEGTLLTTEECLLN 168
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
+NRN LTK QIEN+LK+YL V K+IWL +GL G DG
Sbjct: 169 QNRNSELTKEQIENKLKSYLNVHKVIWLKKGLDGDETDG 207
>gi|386065040|ref|YP_005980344.1| putative peptidylarginine deiminase [Pseudomonas aeruginosa
NCGM2.S1]
gi|348033599|dbj|BAK88959.1| putative peptidylarginine deiminase [Pseudomonas aeruginosa
NCGM2.S1]
Length = 337
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 127/352 (36%), Positives = 167/352 (47%), Gaps = 78/352 (22%)
Query: 14 MPAEWEPHSQCWMGWPVRYERL---DNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQ 70
MPAEW PH+ WM +P + R+ W Q+ FA VA AI++FEPV + A
Sbjct: 1 MPAEWTPHAATWMAFP--HNRMLWESEWGVSLADVQQDFAAVANAIARFEPVKLVVDPAA 58
Query: 71 WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
+ A N+ +IE++++ SW RD+GP+ V + +AG+ W FN+WGG
Sbjct: 59 LDRAGELCAGNVELIELAIDDSWCRDSGPSFVCHPQLG--------LAGVSWRFNAWGG- 109
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
++ D +AR+IL L F + EGG+IHVDGEGT +TTE LLN NRNP
Sbjct: 110 ----KSAYAQDASLARRILDGLGLECFGVPLANEGGAIHVDGEGTLITTESVLLNANRNP 165
Query: 191 HLTKGQIENELKAYLGVMKIIWL---PRGLFGMIHDGE-------AKP---RLAGTR--- 234
L+K +IE LGV + IWL P + G + DG A+P L TR
Sbjct: 166 GLSKAEIEALFARLLGVTRTIWLPGDPDRVTGDMTDGHVDGVCAFARPGALLLDATRDTT 225
Query: 235 ------------------------------------------LAASYVNFYIANGGIITP 252
ASY NFYIANG II P
Sbjct: 226 SAYAEVVRENRRALELALDARGRRFELIELFDAGEVAPEEGVFCASYTNFYIANGAIIMP 285
Query: 253 QFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIPT 304
+G D A L++AFP EVV + R + GGG +HCITQQQPA P
Sbjct: 286 AYGVAA-DDAAAATLARAFPAREVVPV-RIDHLAHGGGGVHCITQQQPAWPA 335
>gi|257790443|ref|YP_003181049.1| agmatine deiminase [Eggerthella lenta DSM 2243]
gi|317490061|ref|ZP_07948550.1| agmatine deiminase [Eggerthella sp. 1_3_56FAA]
gi|325829799|ref|ZP_08163257.1| agmatine deiminase [Eggerthella sp. HGA1]
gi|257474340|gb|ACV54660.1| agmatine deiminase [Eggerthella lenta DSM 2243]
gi|316910766|gb|EFV32386.1| agmatine deiminase [Eggerthella sp. 1_3_56FAA]
gi|325487966|gb|EGC90403.1| agmatine deiminase [Eggerthella sp. HGA1]
Length = 386
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 130/228 (57%), Gaps = 23/228 (10%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
E TP GY MP E+EP ++ WM WP R D W A AQ+ +A VA AI++FEP
Sbjct: 6 ESVSTPKADGYRMPGEFEPQTRIWMAWP---HRTDTWAWGAKPAQKQYADVARAIAEFEP 62
Query: 62 VTVCASAAQWENARSQLP--ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
VT+C + + NA++ EN+ V+EM+ + +W RDTG T VVN
Sbjct: 63 VTMCVNQVDYANAKAVFEDDENVTVVEMTTDDAWVRDTGATWVVNDEGDKRA-------- 114
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLT 178
+ W+FN++GG ++G Y W D Q+A K+ R+ P S +LEGGSIHVDGEGT +T
Sbjct: 115 VHWHFNAYGGFENGLYFPWDKDEQIALKMAEMSGCRRYRPESFILEGGSIHVDGEGTVIT 174
Query: 179 TEECLLNKNRNPHLT---------KGQIENELKAYLGVMKIIWLPRGL 217
T+ CLL+ RN +T + + +LK YLGV K+IW+ G+
Sbjct: 175 TDMCLLDPGRNASVTDYEPWSEELRAYCDEQLKKYLGVEKVIWVKDGI 222
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 56/82 (68%), Gaps = 8/82 (9%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPK------YEVVGI 279
A+PR+A L ASY+NF I NGG+I PQ+GD+ D AV+ + AF + Y+ VG+
Sbjct: 305 AEPRVADEPLIASYMNFLIVNGGVIVPQYGDEN-DALAVQQIQAAFDEAWGEGAYKAVGV 363
Query: 280 ERAREIVLGGGNIHCITQQQPA 301
+ ++V GGGNIHCITQQ+PA
Sbjct: 364 -KTDQVVFGGGNIHCITQQEPA 384
>gi|384249738|gb|EIE23219.1| agmatine deiminase [Coccomyxa subellipsoidea C-169]
Length = 384
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 133/223 (59%), Gaps = 17/223 (7%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNW-RDDALHAQRVFAKVATAISKFEPVTVCASAA 69
G+ PAEWE Q + GWP + W R++A Q VATA+S+F+PVTVCA+
Sbjct: 11 GFRWPAEWELQKQVFFGWP----SIGEWFRNNAGPVQEQVVGVATALSQFQPVTVCANPH 66
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
Q + AR LP +IRV+E+ + RDT P VV S +V I + FN++GG
Sbjct: 67 QVQRAREMLPAHIRVLEVPHETPYIRDTAPLFVVRPSPEDPAQN--EVTAIGFKFNAYGG 124
Query: 130 V--DDGCY-----RDWSLDLQ---VARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTT 179
+ +DG + ++ DLQ VA + ++E +P VLEGGS+H DGEGT +TT
Sbjct: 125 IQKEDGSWWTKYGTLYATDLQDARVAATLAASEGVPLVKADFVLEGGSVHTDGEGTLVTT 184
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIH 222
ECLL+KNRNP LTK QIE +L+ YL + K+IWLP+G++ +
Sbjct: 185 AECLLHKNRNPDLTKEQIEAQLQKYLAIEKVIWLPKGVYADFY 227
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 224 GEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAR 283
GE K R AG RL ASYVNFY+ANGG + P FG + D A + AF + V AR
Sbjct: 301 GEVKKRDAGARLPASYVNFYLANGGAVIPAFGVET-DEPARLAIQAAFGESRKVVSVPAR 359
Query: 284 EIVLGGGNIHCITQQQPA 301
EI+LGGG+IHC++ QQPA
Sbjct: 360 EILLGGGDIHCMSMQQPA 377
>gi|156741803|ref|YP_001431932.1| agmatine deiminase [Roseiflexus castenholzii DSM 13941]
gi|156233131|gb|ABU57914.1| Agmatine deiminase [Roseiflexus castenholzii DSM 13941]
Length = 348
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/358 (33%), Positives = 160/358 (44%), Gaps = 77/358 (21%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TPA GY MPAEW PH W+ WP E +W ++A++ A+++ E V +
Sbjct: 7 TPAQLGYRMPAEWAPHQATWLSWPHNEE---SWPGKLHIVLPIYARMVAALARSETVHIN 63
Query: 66 ASAAQWENARSQLPE------NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
+ E +L +I N +W RD G VV +A
Sbjct: 64 VNDEAMEEEACRLLHSVGAEGDIHFHHFPTNDAWCRDHGAIFVVRDGDD-------PLAA 116
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTT 179
I W +N+WGG Y + LD Q+ R++ P F MVLEGGSI V+GEG LTT
Sbjct: 117 IRWEYNAWGGK----YPPFDLDRQIPRRMAEALGAPCFDGGMVLEGGSIDVNGEGLLLTT 172
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG--------------- 224
E CLLN NRNPHLT+ QIE L YLGV ++WL G+ G DG
Sbjct: 173 EACLLNPNRNPHLTREQIEQRLCDYLGVSTVLWLGDGIVGDDTDGHVDDLTRFVAPDTVV 232
Query: 225 ---EAKP----------------RLAGTR---------------------LAASYVNFYI 244
E+ P R+ R L ASY NFYI
Sbjct: 233 TAVESDPSDENYDALQENLRRLRRMTDHRGGALRIVALPMPPAIVYEGRRLPASYANFYI 292
Query: 245 ANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
AN ++ P F D A +L++ FP E+VGI+ ++V G G HC+TQQ PA+
Sbjct: 293 ANRVVLLPTFNHPN-DDRAAAILAELFPTREIVGID-CTDMVWGLGAWHCLTQQVPAV 348
>gi|386586530|ref|YP_006082932.1| hypothetical protein SSUD12_1404 [Streptococcus suis D12]
gi|353738676|gb|AER19684.1| hypothetical protein SSUD12_1404 [Streptococcus suis D12]
Length = 367
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 125/217 (57%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W D A++ F++V I++ E V
Sbjct: 1 MIESPKAAGYRMPAEYEPHHGTLMVWPTR---PGSWPFDGQGAKKAFSQVIKTIAESEQV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A E A+S L + + ++++ N +W RDTGPT++V+++ + +DW
Sbjct: 58 YLLVDEAHREEAQSMLGDGVTYLDITTNDAWSRDTGPTVLVHENG--------RALSVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLP-RFPHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + LP H VLEGG+IH DGEGT L TE
Sbjct: 110 AFNAWGGSYDGLYQDYEADDQVASRFSQAIGLPVHDAHPFVLEGGAIHSDGEGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHL K QIE L LG K++WLP G++
Sbjct: 170 CLLSPGRNPHLIKDQIEQVLLDTLGAEKVLWLPYGIY 206
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 92/176 (52%), Gaps = 20/176 (11%)
Query: 143 QVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHL------- 192
QV L E++ P+ + + + HVD + E +L + +P
Sbjct: 187 QVLLDTLGAEKVLWLPYGIYNDETNEHVDNVAAFVGPAELVLAWTDDESDPQYAMSKADL 246
Query: 193 --------TKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYI 244
TKG+ K + I+ L G +++ + R AG RLAASYVNFY+
Sbjct: 247 DYLEEQVDTKGRKLTVHKLPIPKNPILVTEEDLPGYVYEEGEEERTAGERLAASYVNFYV 306
Query: 245 ANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
+NG ++ PQF D+ D +A+ +L+Q FP +VVGI AR+I+LGGGN+HCITQQ P
Sbjct: 307 SNGAVLVPQFDDEH-DAQALHLLAQLFPTRKVVGIP-ARDILLGGGNVHCITQQIP 360
>gi|323140846|ref|ZP_08075759.1| agmatine deiminase [Phascolarctobacterium succinatutens YIT 12067]
gi|322414584|gb|EFY05390.1| agmatine deiminase [Phascolarctobacterium succinatutens YIT 12067]
Length = 377
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 124/221 (56%), Gaps = 11/221 (4%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
+E N TPA G+ MP E+EPH C + WP +R +W A+ A F V AI+ E
Sbjct: 3 LEKNFTPAADGFHMPGEYEPHDGCIIVWP---QRPGSWSFGAVAACEAFTAVIKAIAASE 59
Query: 61 PVTVCASAAQWENARSQLP--ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVA 118
V V A + A+ L N+ ++ M + SW RD GPT VV GAQ ++
Sbjct: 60 KVYVICGAKHFAVAQEYLAGVANVELLAMETDDSWARDIGPTFVVR-----DGAQGRELR 114
Query: 119 GIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCL 177
G++W FN+WGG DG Y D+ D A K + VLEGGSIH DG+GT L
Sbjct: 115 GVNWRFNAWGGEVDGLYPDYEQDDAFAEKFAEHYGAALYDAVPFVLEGGSIHCDGDGTAL 174
Query: 178 TTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
TE CLL+ RNP L+K QIE +LK YLGV K++W+PRG++
Sbjct: 175 VTEACLLSAGRNPDLSKEQIEQKLKTYLGVEKVLWIPRGIY 215
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFG--DKKWDGEAVRVLSQAFPKYEVVGIERAREIV 286
R AG RLAASYVNFY +N ++ P FG + D A +L++ P+ +VV I AR I+
Sbjct: 300 REAGERLAASYVNFYFSNDSVVVPAFGGENAASDALAAEILAKLCPERKVVQIP-ARAIL 358
Query: 287 LGGGNIHCITQQQP 300
GGGNIHCITQQ P
Sbjct: 359 TGGGNIHCITQQIP 372
>gi|448933251|gb|AGE56808.1| agmatine deiminase [Acanthocystis turfacea Chlorella virus NE-JV-2]
Length = 362
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 125/215 (58%), Gaps = 14/215 (6%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E H + +M +P R DNWRD+A +AQ A +A ISK E V +
Sbjct: 3 TPKQDGFRMPGEFEHHDRTFMTFP---HRPDNWRDNAKNAQHAIADLAREISKHEEVVMI 59
Query: 66 ASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
A S L + N+++ + W RDTG T V N + ++ GI W+F
Sbjct: 60 TPREHMYTAVSLLHDTNVKITAFDSDDCWTRDTGATFVSNGN---------ELRGISWDF 110
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECL 183
N+WGG DGCY W D ++A ++ + + VLEGGS+HVDG+GTC+TTEECL
Sbjct: 111 NAWGGHYDGCYTSWDKDSKIADRMCAVANASVYRTEGFVLEGGSVHVDGDGTCITTEECL 170
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
L+ RNPHL+KG IE+ LK +L V K++WL G+
Sbjct: 171 LSGGRNPHLSKGDIEHMLKEHLNVDKVLWLKYGVI 205
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G++ G A PR G RLAASYVNF + NG II P FGD ++D A+ L FP E+ G
Sbjct: 279 GIVRSGHALPRNVGDRLAASYVNFVMPNGAIIFPTFGDDEYDARALETLKSIFPDREIKG 338
Query: 279 IERAREIVLGGGNIHCITQQQPAI 302
+REI+LGGGN+HC+TQQQP++
Sbjct: 339 F-YSREILLGGGNLHCVTQQQPSV 361
>gi|111022557|ref|YP_705529.1| agmatine deiminase [Rhodococcus jostii RHA1]
gi|110822087|gb|ABG97371.1| possible agmatine deiminase [Rhodococcus jostii RHA1]
Length = 340
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/348 (32%), Positives = 163/348 (46%), Gaps = 72/348 (20%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAE E H + WM +P L + ++ A+ +A+VA A+++FEPVTV Q
Sbjct: 5 MPAEGELHERTWMAYPSEGYSLGDTPEEHHEARTTWAEVAHAVARFEPVTVVVDPGQVSA 64
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
A+ L +I ++E +N +W RD GPT V+++ ++ G+DW FN WGG D
Sbjct: 65 AKEYLSADIDIVEAPLNDAWMRDIGPTFVLSEDG--------RLGGVDWIFNGWGGQD-- 114
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ W D ++ ++ +V EGG I VDG GT L TE L+ RNP L+
Sbjct: 115 -WAQWDKDSKIGALVVERSGAELVDSPIVNEGGGIQVDGLGTVLVTETVQLDPGRNPELS 173
Query: 194 KGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIHD------- 223
K IE EL +G K+IWLPRGL +G ++HD
Sbjct: 174 KADIEAELARTIGATKVIWLPRGLTRDQDTYGTRGHVDIVAAIPSPGVVLVHDQRNPEHP 233
Query: 224 -------------------GEA-----KPRLAGTRLAASYVNF-----YIANGGIITPQF 254
GE+ P R +V++ ++ NGG+I F
Sbjct: 234 DFEVSKAVIDLLKQTTDARGESWEIITVPAPTVLRDEEGFVDYSYINHFVVNGGVIACSF 293
Query: 255 GDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
D D EAV +LS A+P VV ++ AR + GG IHCITQ QPA+
Sbjct: 294 DDPA-DEEAVAILSAAYPGRTVVSVD-ARPLFARGGGIHCITQHQPAV 339
>gi|339500213|ref|YP_004698248.1| Agmatine deiminase [Spirochaeta caldaria DSM 7334]
gi|338834562|gb|AEJ19740.1| Agmatine deiminase [Spirochaeta caldaria DSM 7334]
Length = 364
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 132/226 (58%), Gaps = 22/226 (9%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP + MP EW P M WPVR E W D A+ + +VA AI++FE + +
Sbjct: 11 TPREDDFWMPPEWFPREGTLMSWPVRIE---AWLDGLEEAREGYVEVARAIAEFEQLYMI 67
Query: 66 ASAA-------QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVA 118
A ++ +++AR +LP ++ V + + SW RD GPTI+V+K + A
Sbjct: 68 ARSSVDAKGYVPYDDARKRLPASVEVWDFPHDDSWVRDNGPTILVHKDG--------RRA 119
Query: 119 GIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLT 178
G++W FN+WG Y + D ++A +IL LPR+ ++LEGGSIHVDGEGT LT
Sbjct: 120 GVNWQFNAWGK----KYHPYEADNELAPRILEKLGLPRYDAPLILEGGSIHVDGEGTLLT 175
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
TEECLL KNRNP L+K IE L++YL V +IWL RGL+G DG
Sbjct: 176 TEECLLAKNRNPSLSKETIEAYLRSYLSVSTVIWLDRGLWGDETDG 221
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 7/75 (9%)
Query: 232 GTRLAASYVNFYIANGGIITPQFGD------KKWDGEAVRVLSQAFPKYEVVGIERAREI 285
G L SY+NFY +GG+I P FG KK D A+ +L + +P+ ++V I+ +I
Sbjct: 284 GESLTLSYINFYPVSGGLIVPVFGKDGDAEMKKADDRALGILREQYPERKIVPID-GMKI 342
Query: 286 VLGGGNIHCITQQQP 300
+ GGGN+HCITQQ P
Sbjct: 343 IKGGGNVHCITQQIP 357
>gi|306829508|ref|ZP_07462698.1| agmatine deiminase [Streptococcus mitis ATCC 6249]
gi|304428594|gb|EFM31684.1| agmatine deiminase [Streptococcus mitis ATCC 6249]
Length = 361
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 126/217 (58%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A++ F+++ I++ E V
Sbjct: 1 MMDSPKKLGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKKAFSQIIQTIAQGETV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ ARS L +N+ +++ N +W RDTGPTI++N Q K+A +DW
Sbjct: 58 YLLVEEDYLSEARSYLGDNVVYLDIQTNDAWARDTGPTILLND-------QREKLA-VDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + T +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEADNQVASRFAETLEMPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHLTK +IE L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPHLTKEEIEKNLLESLGAEKVIWLPYGIY 206
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|118467596|ref|YP_884857.1| agmatine deiminase [Mycobacterium smegmatis str. MC2 155]
gi|399984860|ref|YP_006565208.1| agmatine deiminase [Mycobacterium smegmatis str. MC2 155]
gi|118168883|gb|ABK69779.1| agmatine deiminase [Mycobacterium smegmatis str. MC2 155]
gi|399229420|gb|AFP36913.1| putative agmatine deiminase [Mycobacterium smegmatis str. MC2 155]
Length = 340
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/347 (32%), Positives = 162/347 (46%), Gaps = 67/347 (19%)
Query: 9 LHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASA 68
+ Y+MPAE P + WM +P L + D A+ +A VA AI++FEPVT+
Sbjct: 1 MASYVMPAEGAPQDRVWMAFPCEGYSLGDTEADRHEARSTWAAVAHAIAQFEPVTMLVDP 60
Query: 69 AQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWG 128
A+ A+S + +++ +IE +N +W RD GPT V A+ G+ VA +DW FN WG
Sbjct: 61 AEIGAAKSYVSQDVELIEAPLNDAWMRDIGPTFV----HAADGS----VAAVDWTFNGWG 112
Query: 129 GVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNR 188
G D + W D ++ + +P ++V EGG I VDG GT L TE L+ R
Sbjct: 113 GQD---WARWDRDAEIGVTVAELASVPVVSSALVNEGGGIQVDGNGTVLLTETVQLDPGR 169
Query: 189 NPHLTKGQIENEL-------------------------KAYLGVMKIIWLPRGLFGMIHD 223
NP LT+ Q+E EL + ++ ++ I P L
Sbjct: 170 NPGLTREQVERELARTIGGTDFVWLPRGLTRDSERFGTRGHVDIVAAIPTPGRLLLHTQR 229
Query: 224 GEAKP----------------RLAGTRLAA-------------SYVNFYIANGGIITPQF 254
EA P R + A SY+N + NGG+I F
Sbjct: 230 AEAHPDSLVCKEIRAVLEADGRFDIVEMPAPDTLTDAEGPVDYSYINHLVVNGGVIACAF 289
Query: 255 GDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
GD + D +A +L++ +P EVV ++ AR + GG IHCITQQQPA
Sbjct: 290 GDPR-DADAAAILAEQYPGREVVSVD-ARPLFARGGGIHCITQQQPA 334
>gi|441510899|ref|ZP_20992798.1| hypothetical protein GOACH_30_00050 [Gordonia aichiensis NBRC
108223]
gi|441444962|dbj|GAC50759.1| hypothetical protein GOACH_30_00050 [Gordonia aichiensis NBRC
108223]
Length = 344
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 164/350 (46%), Gaps = 71/350 (20%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+ MPAE PH + WM +P L DA A ++ VA +++FEPVT+ +
Sbjct: 3 WTMPAETAPHERVWMAFPRANTTLAESAADAETAYAAWSTVANTVAEFEPVTIVVDPTEV 62
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
AR+ L + ++E ++ +W RD GPT VV+++ ++ + W FN WG +
Sbjct: 63 ARARALLSGEVTIVEAPLDDAWMRDIGPTFVVDENG--------QLGAVAWTFNGWGAQE 114
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ +W+ D Q+ R + +P +V EGG+IHVDGEGT L TE L+ RNP+
Sbjct: 115 ---WAEWTNDRQIGRFVAGQAGVPVVSSMLVQEGGAIHVDGEGTVLVTETVQLDPYRNPY 171
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGL------FG-------------------------- 219
T IE EL+ LG K+IW+PRGL FG
Sbjct: 172 ATHQTIEAELERTLGAQKVIWVPRGLTRDYERFGTRGHIDMVATIPSPGTLLLHHQPNPD 231
Query: 220 -------------MIHDGEAK---------PRLAGTRLAASYVNF-----YIANGGIITP 252
H +A P A R + +V++ + NGG++
Sbjct: 232 HPDHAVTKGLREFFAHTTDAAGRTWNIVDLPAPATIRDSEGFVDYSYINHLVVNGGVVAC 291
Query: 253 QFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
+G+ + D +A +L +P VV I+ AREI+ GG IHCITQQQPA+
Sbjct: 292 GYGEPEADAQAAEILESVYPGRRVVTID-AREILARGGGIHCITQQQPAV 340
>gi|148656859|ref|YP_001277064.1| agmatine deiminase [Roseiflexus sp. RS-1]
gi|148568969|gb|ABQ91114.1| Agmatine deiminase [Roseiflexus sp. RS-1]
Length = 348
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 124/358 (34%), Positives = 165/358 (46%), Gaps = 77/358 (21%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP GY MPAEW PH W+ WP E +W ++A++ A++ E V +
Sbjct: 7 TPTQLGYRMPAEWAPHQATWLSWPHNEE---SWPGKLHIILPIYARMVAALACSETVHIN 63
Query: 66 AS-AAQWENARSQLPE-----NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
+ A E AR L +IR + N +W RD G VV A +A
Sbjct: 64 VNDEAMEEQARRLLHAAGAQGDIRFHHVPTNDAWCRDHGAIFVVR-------AGDDPLAA 116
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTT 179
I+W +N+WGG Y + LD Q+ +++ +P F MVLEGGSI V+GEG LTT
Sbjct: 117 INWEYNAWGGK----YPPYDLDNQIPQRMAEALGVPCFDGGMVLEGGSIDVNGEGLLLTT 172
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG--------------- 224
E CLLN NRNPHLT+ QIE L YLGV I+WL G+ G DG
Sbjct: 173 EACLLNPNRNPHLTREQIEQRLCDYLGVSNILWLGDGIVGDDTDGHIDDLARFVAPDTVV 232
Query: 225 ---EAKP----------------RLAGTR---------------------LAASYVNFYI 244
E+ P R+ R L ASY NFYI
Sbjct: 233 TVVESDPTDENYDALQENLRRLKRMTDLRGGALRIVELPMPPAIVYEGRRLPASYANFYI 292
Query: 245 ANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
AN ++ P F D A +L++ FP ++VGI+ ++V G G HC+TQQ PA+
Sbjct: 293 ANRVVLLPTFNHPN-DERAAAILAELFPTRDIVGID-CTDMVWGLGAWHCLTQQVPAV 348
>gi|163797227|ref|ZP_02191181.1| hypothetical protein BAL199_09780 [alpha proteobacterium BAL199]
gi|159177522|gb|EDP62076.1| hypothetical protein BAL199_09780 [alpha proteobacterium BAL199]
Length = 349
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 119/205 (58%), Gaps = 11/205 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MP E+ PH+ WM WPVR D WRDDA A++ F VA AI+ E VTV + +
Sbjct: 1 MPGEFAPHAGTWMLWPVRS---DTWRDDARPAEQAFTAVAEAIAVVELVTVGVDPTRLDR 57
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
AR+ L +I+++ + N +W RD GPT+VV G + + A +DW FN+WGG G
Sbjct: 58 ARAALSSHIKMVSLESNDAWMRDVGPTVVV-------GTKGERRA-VDWTFNAWGGAVHG 109
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
Y DW+ D VA + + E R+ S++ EGG +H DG GT TEEC+L+ RN L
Sbjct: 110 LYPDWAADDCVAAGVAAAENFARYRCSLIQEGGGLHTDGAGTIFVTEECVLSAGRNAGLG 169
Query: 194 KGQIENELKAYLGVMKIIWLPRGLF 218
+ + E LKAY G +IWLP G+F
Sbjct: 170 RVEAEEVLKAYTGAEVVIWLPSGVF 194
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 226 AKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
+KPR AG RLAASY NFY+ANG +I P D + D A+R+++ A E+VGI AREI
Sbjct: 275 SKPRRAGDRLAASYANFYLANGRVIVP-LRDPRTDEAALRIIADALSGREIVGIS-AREI 332
Query: 286 VLGGGNIHCITQQQPA 301
+LGGGNIHCITQQ PA
Sbjct: 333 LLGGGNIHCITQQIPA 348
>gi|182414673|ref|YP_001819739.1| agmatine deiminase [Opitutus terrae PB90-1]
gi|177841887|gb|ACB76139.1| Agmatine deiminase [Opitutus terrae PB90-1]
Length = 334
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 156/349 (44%), Gaps = 76/349 (21%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAEWEP + W+ WP W + +A AIS++E V + +A
Sbjct: 1 MPAEWEPQAAVWLSWP---HNRKTWPGLFRPVPKAYAAFVAAISRYESVRINCAATLQPR 57
Query: 74 ARS------QLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSW 127
AR + E + + N +W RD GP V N +A ++A DW +N+W
Sbjct: 58 ARRLCERAGAVMERVAFFDHPTNDAWCRDHGPLFVRNDRTA-------EIAVTDWRYNAW 110
Query: 128 GGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
G Y + LD ++ I +L RF + MVLEGGSI V+G G LTTE+CLLN N
Sbjct: 111 GDK----YPPYDLDNRIPPLIARRLKLRRFENDMVLEGGSIDVNGAGALLTTEQCLLNPN 166
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG----------------------- 224
RNPHLT+ QIE L YLGV ++WL G+ G DG
Sbjct: 167 RNPHLTREQIERNLHDYLGVETMLWLGDGIVGDDTDGHIDDITRFFRADAIVTCVEPNRR 226
Query: 225 --------EAKPRLAGTRLA------------------------ASYVNFYIANGGIITP 252
E RL R A ASY NF + NG ++ P
Sbjct: 227 DANHAPLKENLRRLKTFRTARGKSFEIVELPMPKPVAFRGQRVPASYANFLVVNGAVLVP 286
Query: 253 QFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
F D EA +L+ F EVV ++ A +++ G G +HC++QQQPA
Sbjct: 287 NFRQPPRDREANAILAHCFAGREVVPVD-AYDLIWGLGTLHCLSQQQPA 334
>gi|408680926|ref|YP_006880753.1| Agmatine deiminase [Streptomyces venezuelae ATCC 10712]
gi|328885255|emb|CCA58494.1| Agmatine deiminase [Streptomyces venezuelae ATCC 10712]
Length = 338
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 161/349 (46%), Gaps = 75/349 (21%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
Y MPAEW PH + WM WP ++ A++ +A VA + +FEPVT+ +
Sbjct: 3 YRMPAEWMPHERTWMAWPSPNPTFTT-AEELAEARQAWAAVARTVRRFEPVTMVVAPGDA 61
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
E+AR+ + E++ ++E ++ +W RD GPT V + + +A +DW FN WGG D
Sbjct: 62 ESARALVGEDVTLVERDLDDAWMRDIGPTFVTDGTG---------LAAVDWVFNGWGGQD 112
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ W D ++A + +P +V EGG+IHVDGEGT L T+ L RNP
Sbjct: 113 ---WARWEHDSKIACHVADAAGVPVLSSPLVNEGGAIHVDGEGTVLLTDTVQLGSGRNPG 169
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGLFG-----------------------MIHDGE--A 226
T+ Q+E E+ A LG K IWLP GL G ++H + A
Sbjct: 170 WTREQVEAEIHAKLGTTKAIWLPHGLSGDYGLYGTQGHVDIVAAFARPGTVLVHSQQDPA 229
Query: 227 KPRLAGTRL------------------------------AASYVNFYIAN-----GGIIT 251
P +R+ +V++ N GG++
Sbjct: 230 HPDYERSRMYVNILRGQTDAQGRPLEVVEIPAPTVLKDEEGDWVDYSYINHYLCNGGVVL 289
Query: 252 PQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
F D D A + + FP+ EVV ++ AR I GGG IHCITQQQP
Sbjct: 290 CAFDDPH-DELAAEIFRRLFPEREVVLVD-ARTIFAGGGGIHCITQQQP 336
>gi|219847633|ref|YP_002462066.1| Agmatine deiminase [Chloroflexus aggregans DSM 9485]
gi|219541892|gb|ACL23630.1| Agmatine deiminase [Chloroflexus aggregans DSM 9485]
Length = 347
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/358 (33%), Positives = 161/358 (44%), Gaps = 75/358 (20%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TPA GY MPAEW PH W+ WP + +W ++A+ +++ E V +
Sbjct: 3 TPAESGYFMPAEWAPHQATWLSWP---HKEASWPGLIERIWPIYARFVAELARGETVHIN 59
Query: 66 ASAAQWEN------ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
+ A A + +IR+ E N +W RD G +V G ++A
Sbjct: 60 VNDAAMAAQARAFLAEAGATGDIRLHEFPTNDAWCRDHGAIFIVR-----DGPHGRELAA 114
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTT 179
DW FN+WG Y + LD Q+ ++ +PRF MVLEGGSI VDG G LT+
Sbjct: 115 TDWEFNAWGNK----YPPYDLDNQIPARMAEYLGVPRFCGGMVLEGGSIEVDGNGLLLTS 170
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG--------------- 224
E+CLLN NRNPH+T+ +IE L+ LGV I+WL G+ G DG
Sbjct: 171 EQCLLNPNRNPHMTRTEIEQRLRDMLGVHTILWLGEGIVGDDTDGHIDDLARFVAPSTVV 230
Query: 225 ---EAKP-------------RLAGTRLAA------------------------SYVNFYI 244
E P RL R AA SY NFYI
Sbjct: 231 TVVEEDPTDENYHVLQDNLRRLQRMRDAAGKPLTILTIPMPPPVYHQGQRLPASYANFYI 290
Query: 245 ANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
AN +I P F D A VL + FP +VGI+ A ++V G G HC++QQ PA+
Sbjct: 291 ANHAVIVPVFNHPN-DQRACEVLQRCFPDRRIVGID-ATDVVWGLGAWHCLSQQVPAV 346
>gi|429333643|ref|ZP_19214336.1| peptidyl-arginine deiminase [Pseudomonas putida CSV86]
gi|428761647|gb|EKX83868.1| peptidyl-arginine deiminase [Pseudomonas putida CSV86]
Length = 353
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 122/353 (34%), Positives = 164/353 (46%), Gaps = 75/353 (21%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
G++MPAEW PH+ WM WP ++ W Q FA+VA AI++FEPV + +
Sbjct: 10 GWMMPAEWAPHAATWMVWPHNRALWESTWSVRLEQVQEDFARVANAIARFEPVKLVVALG 69
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
A N+ +IE ++ SW RD+GPT + + +AG+ W FN+WGG
Sbjct: 70 ARARAAGLCGANVELIEQPVDDSWCRDSGPTFICHPQHG--------LAGVSWRFNAWGG 121
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
+D +AR++L+ L F + EGG+IHVDGEGT +TTE LLN NRN
Sbjct: 122 KSAH-----GMDEGLARRVLNGMGLDCFGTWLANEGGAIHVDGEGTLVTTESVLLNPNRN 176
Query: 190 PHLTKGQIENELKAYLGVMKIIWL---PRGLFGMIHDG---------------------- 224
P L K E LGV K IWL P+ + G + DG
Sbjct: 177 PGLDKADAEELFARLLGVKKTIWLPGDPKYVTGDMTDGHVDGVCAFARPGVLLVDATHDR 236
Query: 225 ---------EAKPRLAGTRLAA----SYVNFYIA---------------------NGGII 250
E + L+ TR A ++ Y A NG II
Sbjct: 237 DSVYAEVVRENRRALSLTRDAQGRSFELIDLYEASAAVDPEAEVFCASYTNFYIANGAII 296
Query: 251 TPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIP 303
P +G + D +A RVL+ AFP EVV + R + GGG +HCITQQQPA P
Sbjct: 297 MPAYGIEA-DRDAARVLAGAFPDREVVPV-RIEHLAHGGGGVHCITQQQPAWP 347
>gi|384106755|ref|ZP_10007661.1| agmatine deiminase [Rhodococcus imtechensis RKJ300]
gi|383833516|gb|EID72968.1| agmatine deiminase [Rhodococcus imtechensis RKJ300]
Length = 340
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/348 (32%), Positives = 161/348 (46%), Gaps = 72/348 (20%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAE E H + WM +P L + ++ A+ +A+VA A+++FEPVTV Q
Sbjct: 5 MPAEGELHERTWMAYPSEGYSLGDTPEEHHEARTTWAEVAHAVARFEPVTVVVDPGQVSA 64
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
A L +I ++ +N +W RD GPT V+++ + G+DW FN WGG D
Sbjct: 65 AEEYLSADIDIVAAPLNDAWMRDIGPTFVLSEDG--------HLGGVDWIFNGWGGQD-- 114
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ W D ++ ++ +V EGG IHVDG GT L TE L+ RNP L+
Sbjct: 115 -WAQWDKDSKIGALVVERSGAELVDSPIVNEGGGIHVDGLGTVLVTETVQLDPGRNPELS 173
Query: 194 KGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIHD------- 223
K IE EL +G K+IWLPRGL +G ++HD
Sbjct: 174 KADIEAELARTIGATKVIWLPRGLTRDQDTYGTRGHVDIVAAIPSPGVILVHDQRNPEHP 233
Query: 224 -------------------GEA-----KPRLAGTRLAASYVNF-----YIANGGIITPQF 254
GE+ P R +V++ ++ NGG+I F
Sbjct: 234 DFEVSKAVIDVLKQTTDARGESWEIITVPAPTVLRDEEGFVDYSYINHFVVNGGVIACSF 293
Query: 255 GDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
D D EAV +LS A+P VV ++ AR + GG IHCITQ QPA+
Sbjct: 294 DDPA-DEEAVAILSAAYPGRTVVSVD-ARPLFARGGGIHCITQHQPAV 339
>gi|406577402|ref|ZP_11053013.1| agmatine deiminase [Streptococcus sp. GMD6S]
gi|404460029|gb|EKA06322.1| agmatine deiminase [Streptococcus sp. GMD6S]
Length = 361
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 121/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIKTIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + ++ N +W RDTGPTI+VN+ +DW
Sbjct: 58 YLLVEQAHLSEAQSYLGDKVVYFDIPTNDAWARDTGPTILVNEKREK--------LAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGTVDGLYQDYEDDDQVASRFAELLEIPVYEAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHL+K QIEN L LG K+IWLP G++
Sbjct: 170 CLLSAGRNPHLSKAQIENTLLESLGAEKVIWLPYGIY 206
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|448932571|gb|AGE56130.1| agmatine deiminase [Acanthocystis turfacea Chlorella virus
MO0605SPH]
gi|448933576|gb|AGE57132.1| agmatine deiminase [Acanthocystis turfacea Chlorella virus NE-JV-3]
gi|448936703|gb|AGE60250.1| agmatine deiminase [Acanthocystis turfacea Chlorella virus WI0606]
Length = 362
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 125/215 (58%), Gaps = 14/215 (6%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E H + +M +P R DNWR++A +AQ A +A ISK E V +
Sbjct: 3 TPKQDGFRMPGEFEHHDRTFMTFP---HRPDNWRNNAKNAQHAIADLAREISKHEEVVMI 59
Query: 66 ASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
A S L + N+++ + W RDTG T V N + ++ GI W+F
Sbjct: 60 TPREHMYTAVSLLHDTNVKITAFDSDDCWTRDTGATFVSNGN---------ELRGISWDF 110
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECL 183
N+WGG DGCY W D ++A ++ + + VLEGGS+HVDG+GTC+TTEECL
Sbjct: 111 NAWGGHYDGCYTSWDKDSKIAGRMCAVANASVYRTEGFVLEGGSVHVDGDGTCITTEECL 170
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
L+ RNPHL+KG IE+ LK +L V K++WL G+
Sbjct: 171 LSGGRNPHLSKGDIEHMLKEHLNVDKVLWLKHGVI 205
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G++ G A PR G RLAASYVNF + NG II P FGD ++D A+ L FP+ EV G
Sbjct: 279 GIVRSGHALPRNVGDRLAASYVNFVMPNGAIIFPTFGDDEYDARALETLKSIFPEREVTG 338
Query: 279 IERAREIVLGGGNIHCITQQQPAI 302
+ +REI+LGGGN+HC+TQQQP++
Sbjct: 339 L-YSREILLGGGNLHCVTQQQPSV 361
>gi|432342773|ref|ZP_19592013.1| agmatine deiminase [Rhodococcus wratislaviensis IFP 2016]
gi|430772201|gb|ELB87989.1| agmatine deiminase [Rhodococcus wratislaviensis IFP 2016]
Length = 340
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 114/348 (32%), Positives = 161/348 (46%), Gaps = 72/348 (20%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAE E H + WM +P L + ++ A+ +A+VA A+S+FEPVTV Q
Sbjct: 5 MPAEGELHERTWMAYPSEGYSLGDTPEEHHEARTTWAEVAHAVSRFEPVTVVVDPGQVSA 64
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
A L +I ++ +N +W RD GPT V+++ ++ G+DW FN WGG D
Sbjct: 65 AEEYLSADIDIVAAPLNDAWMRDIGPTFVLSEDG--------RLGGVDWIFNGWGGQD-- 114
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ W D ++ ++ +V EGG I VDG GT L TE L+ RNP L+
Sbjct: 115 -WAQWDKDSKIGALVVERSGAELVDSPIVNEGGGIQVDGLGTVLVTETVQLDPGRNPELS 173
Query: 194 KGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIHD------- 223
K IE EL +G K+IWLPRGL +G ++HD
Sbjct: 174 KADIEAELARTIGATKVIWLPRGLTRDQDTYGTRGHVDIVAAIPSPGVVLVHDQRNPEHP 233
Query: 224 -------------------GEA-----KPRLAGTRLAASYVNF-----YIANGGIITPQF 254
GE+ P R +V++ ++ NGG+I F
Sbjct: 234 DFEVSKAVIDVLKQTTDARGESWEIITVPAPTVLRDEEGFVDYSYINHFVVNGGVIACSF 293
Query: 255 GDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
D D EAV +LS A+P VV ++ AR + GG IHCITQ QPA+
Sbjct: 294 DDPA-DEEAVAILSAAYPGRTVVSVD-ARPLFARGGGIHCITQHQPAV 339
>gi|302844596|ref|XP_002953838.1| hypothetical protein VOLCADRAFT_109899 [Volvox carteri f.
nagariensis]
gi|300260946|gb|EFJ45162.1| hypothetical protein VOLCADRAFT_109899 [Volvox carteri f.
nagariensis]
Length = 426
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 95/224 (42%), Positives = 126/224 (56%), Gaps = 14/224 (6%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
+ TP GY MP E+EPH CWMGWP WRD A AQ+ +A +A AIS+FEPV
Sbjct: 44 DATPKQLGYTMPGEFEPHVGCWMGWPYSPYL---WRDGAKPAQQQYAAIAKAISQFEPVW 100
Query: 64 VCASAAQWENARSQLP--ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
+ + E+AR+ + V+EM + W RD GPT +V A+S + VAG+
Sbjct: 101 MFTDPSSIESARNYFRGVSGVTVVEMPLEDGWLRDWGPTCIVKDDPATSKRE---VAGVH 157
Query: 122 WNFNSWGGVDD------GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGT 175
W+++ +G DW D R +L L F + LEGGSIH DG+GT
Sbjct: 158 WDYDCYGAPGKKKMGLPAMMPDWKKDHAAGRAVLDWAGLRAFECPLHLEGGSIHSDGQGT 217
Query: 176 CLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
+ TEECLL+ +RNPHL K IEN LK +LG+ KIIWL +G+ G
Sbjct: 218 LVVTEECLLHPSRNPHLGKEGIENMLKEFLGLEKIIWLWKGMMG 261
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 55/76 (72%), Gaps = 3/76 (3%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFG--DKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
PR+ G RLAASY+N YIANGGI+ PQFG K D A+ VLS+A+P VVG+ +R++
Sbjct: 349 PRVPGERLAASYINHYIANGGIVCPQFGGAQSKSDELALEVLSKAYPGRTVVGV-YSRDV 407
Query: 286 VLGGGNIHCITQQQPA 301
+L GN+HCITQQ A
Sbjct: 408 LLNAGNVHCITQQHVA 423
>gi|377561001|ref|ZP_09790475.1| hypothetical protein GOOTI_173_00030 [Gordonia otitidis NBRC
100426]
gi|377521831|dbj|GAB35640.1| hypothetical protein GOOTI_173_00030 [Gordonia otitidis NBRC
100426]
Length = 344
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 164/350 (46%), Gaps = 71/350 (20%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+ MPAE PH + WM +P L DA A +++VA +S+FEPVT+ ++
Sbjct: 3 WTMPAETAPHDRVWMAFPRINTTLAESAADAETAYAAWSQVANTVSEFEPVTIVVDPSEV 62
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
ARS + + ++E ++ +W RD GPT VV+ S ++ + W FN WG +
Sbjct: 63 TRARSLISSEVTIVEAPLDDAWMRDIGPTFVVDDSG--------QLGAVAWTFNGWGAQE 114
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ +W+ D Q+ R + +P +V EGG+IHVDGEGT L TE L+ RNP+
Sbjct: 115 ---WAEWTNDRQIGRFVAGQAGVPVISSMLVQEGGAIHVDGEGTVLVTETVQLDPYRNPY 171
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIH-----D 223
T+ IE EL +G K+IW+PRGL FG ++H D
Sbjct: 172 ATRETIEAELARTIGARKVIWVPRGLTRDYERFGTRGHIDMVATIPSPGTLLLHHQSNPD 231
Query: 224 GEAKPRLAGTRL--------------------------AASYVNFYIAN-----GGIITP 252
P G R + +V++ N GG+I
Sbjct: 232 HPDHPVTKGLREFFEGTTDAAGRSWDIVDLPAPATIRDSEGFVDYSYINHLVVNGGVIAC 291
Query: 253 QFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
+G+ D A +LS +P VV I+ AREI+ GG IHCITQQQP++
Sbjct: 292 GYGEPDADAHAAEILSSVYPGRRVVTID-AREILARGGGIHCITQQQPSV 340
>gi|150016794|ref|YP_001309048.1| agmatine deiminase [Clostridium beijerinckii NCIMB 8052]
gi|149903259|gb|ABR34092.1| Agmatine deiminase [Clostridium beijerinckii NCIMB 8052]
Length = 347
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 116/364 (31%), Positives = 169/364 (46%), Gaps = 80/364 (21%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERL--DNWRDDALHAQRVFAKVATAISKFEPVTV 64
P Y MPAEW H + ++ WPV+ DN+ D +A+ AI++FEPV+V
Sbjct: 3 PKDFNYKMPAEWTAHERTFISWPVKDSMCHPDNYTD----VCAGYAEYIQAIAEFEPVSV 58
Query: 65 CASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWN 123
+ + +N + E NI ++ + + +W RD GPT +++ AG++W
Sbjct: 59 IVNPYELDNVKKLFSESNIELLPIEHSDAWLRDNGPTFLIDDEGNR--------AGVNWK 110
Query: 124 FNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECL 183
FN+WG Y W LD +VA +IL + +F +++EGGS+H DGEGT +TTEECL
Sbjct: 111 FNAWGEK----YAPWDLDDKVAPQILEHYNIKKFDAPLIMEGGSLHTDGEGTLITTEECL 166
Query: 184 LNKNRNPHL-----------------------------TKGQIENELKAYLGVMKIIWLP 214
LN NRNP+L T G ++N + + G KII
Sbjct: 167 LNSNRNPNLTKEQIETYLKQYLNIEKIIWLKNGLDGDETDGHVDN-IACFAGPTKIIIQT 225
Query: 215 -------------RGLFGMIHDGEAKPR--------------LAGTRLAASYVNFYIANG 247
+ + + +AK R G RL SY+NFY N
Sbjct: 226 CDDPNDANYKITLENIEILKNSTDAKGRKFEIIPINQPPRAEYKGERLTLSYLNFYFVND 285
Query: 248 GIITPQFGDK--KWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIPTN 305
GII P FG + D A +VLS FPK ++ ++ ++ GGN+HC TQQ P P N
Sbjct: 286 GIILPTFGGNASEADKMAEKVLSLTFPKRKIRTVD-GMAVIKEGGNVHCTTQQMP-FPRN 343
Query: 306 AAKL 309
L
Sbjct: 344 LKVL 347
>gi|424851018|ref|ZP_18275415.1| agmatine deiminase [Rhodococcus opacus PD630]
gi|356665683|gb|EHI45754.1| agmatine deiminase [Rhodococcus opacus PD630]
Length = 340
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 113/348 (32%), Positives = 161/348 (46%), Gaps = 72/348 (20%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAE E H + WM +P L + ++ A+ +A+VA A+++FEPVTV Q
Sbjct: 5 MPAEGELHERTWMAYPSEGYSLGDTPEEHHEARTTWAEVAHAVARFEPVTVVVDPGQVSA 64
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
A L +I ++ +N +W RD GPT V+++ ++ G+DW FN WGG D
Sbjct: 65 AEEYLSADIDIVAAPLNDAWMRDIGPTFVLSEDG--------RLGGVDWIFNGWGGQD-- 114
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ W D ++ ++ +V EGG I VDG GT L TE L+ RNP L+
Sbjct: 115 -WAQWDKDSKIGALVVERSEAELVDSPIVNEGGGIQVDGLGTVLVTETVQLDPGRNPELS 173
Query: 194 KGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIHD------- 223
K IE EL +G K+IWLPRGL +G ++HD
Sbjct: 174 KADIEAELARTIGATKVIWLPRGLTRDQDTYGTRGHVDIVAAIPSPGVVLVHDQRNPEHP 233
Query: 224 -------------------GEA-----KPRLAGTRLAASYVNF-----YIANGGIITPQF 254
GE+ P R +V++ ++ NGG+I F
Sbjct: 234 DFEVSKAVIDVLKQTTDARGESWEIITVPAPTVLRDEEGFVDYSYINHFVVNGGVIACSF 293
Query: 255 GDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
D D EAV +LS A+P VV ++ AR + GG IHCITQ QPA+
Sbjct: 294 DDPA-DEEAVAILSAAYPGRTVVSVD-ARPLFARGGGIHCITQHQPAV 339
>gi|448936038|gb|AGE59587.1| agmatine deiminase [Acanthocystis turfacea Chlorella virus
OR0704.3]
Length = 362
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 125/215 (58%), Gaps = 14/215 (6%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E H + +M +P R DNWR++A +AQ A +A ISK E V +
Sbjct: 3 TPKQDGFRMPGEFEHHDRTFMTFP---HRPDNWRNNAKNAQHAIADLAREISKHEEVVMI 59
Query: 66 ASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
A S L + N+++ + W RDTG T V N + ++ GI W+F
Sbjct: 60 TPREHMYTAVSLLHDTNVKITAFDSDDCWTRDTGATFVSNGN---------ELRGISWDF 110
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECL 183
N+WGG DGCY W D ++A ++ + + VLEGGS+HVDG+GTC+TTEECL
Sbjct: 111 NAWGGHYDGCYTSWDKDSKIAGRMCAVANASVYRTEGFVLEGGSVHVDGDGTCITTEECL 170
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
L+ RNPHL+KG IE+ LK +L V K++WL G+
Sbjct: 171 LSGGRNPHLSKGDIEHMLKEHLNVDKVLWLKYGVI 205
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G++ G A PR G RLAASYVNF + NG II P FGD ++D A+ L FP E+ G
Sbjct: 279 GIVRSGHALPRNVGDRLAASYVNFVMPNGAIIFPTFGDDEYDARALETLKSIFPDREIKG 338
Query: 279 IERAREIVLGGGNIHCITQQQPAI 302
+ +REI+LGGGN+HC+TQQQP +
Sbjct: 339 L-YSREILLGGGNLHCVTQQQPTV 361
>gi|426401878|ref|YP_007020850.1| agmatine deiminase [Candidatus Endolissoclinum patella L2]
gi|425858546|gb|AFX99582.1| agmatine deiminase [Candidatus Endolissoclinum patella L2]
Length = 365
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/216 (40%), Positives = 123/216 (56%), Gaps = 11/216 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP Y MP E+EPHS WM WP ER DNWR+DA+ A++ FA VA AI E +
Sbjct: 7 LQSTPIEDNYWMPGEFEPHSGTWMLWP---ERSDNWRNDAVPAEKSFAAVAQAIVAVESL 63
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
V S + A+S LP + ++EM N +W RD GPT+V+N + +DW
Sbjct: 64 KVGVSTRRLARAKSALPSAVTLVEMESNDAWMRDVGPTVVINNKGSKRA--------VDW 115
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG + G Y+DW D VA + E++ + ++ EGG IH DG+GT T+EC
Sbjct: 116 MFNAWGGTEHGLYQDWQADDAVAGIVAKNEQMDHYRAPLIQEGGGIHSDGKGTIFVTKEC 175
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
+L+ RN L E LK+Y G ++IWLP G++
Sbjct: 176 VLSSGRNARLGYRLCEEILKSYSGASQVIWLPCGIY 211
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G++ K R AG RLA SY NFY+ANG ++ P D + D A ++ A P E++
Sbjct: 285 GIVSGSGNKSRKAGDRLAGSYTNFYLANGRVLVPLL-DPRTDDNACLIIGDALPDREIIP 343
Query: 279 IERAREIVLGGGNIHCITQQQP 300
I AREI++GGGNIHCITQQ P
Sbjct: 344 IP-AREILIGGGNIHCITQQIP 364
>gi|383939310|ref|ZP_09992483.1| agmatine deiminase [Streptococcus pseudopneumoniae SK674]
gi|418973265|ref|ZP_13521276.1| agmatine deiminase [Streptococcus pseudopneumoniae ATCC BAA-960]
gi|383349908|gb|EID27824.1| agmatine deiminase [Streptococcus pseudopneumoniae ATCC BAA-960]
gi|383713802|gb|EID69835.1| agmatine deiminase [Streptococcus pseudopneumoniae SK674]
Length = 361
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 124/217 (57%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIKTIAEGEKV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L + + +++ N +W RDTGPTI+VN + K+A +DW
Sbjct: 58 YLLVDQDYLAEAQSYLGDKVVYLDIPTNDAWARDTGPTILVND-------KGQKLA-VDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGGSIH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEADDQVASRFAEALEMPVYDAKPFVLEGGSIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHLTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPHLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF DK D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAVLVPQFQDKN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|401683297|ref|ZP_10815183.1| agmatine deiminase [Streptococcus sp. BS35b]
gi|400187375|gb|EJO21569.1| agmatine deiminase [Streptococcus sp. BS35b]
Length = 361
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 122/217 (56%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F+++ I++ E V
Sbjct: 1 MMDSPKKLGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFSQIIKNIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN +DW
Sbjct: 58 YLLVDQAHLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKREK--------LAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEDDDQVASRFAEALEMPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHL+K +IE L YLG K+IWLP G++
Sbjct: 170 CLLSAGRNPHLSKEEIERRLLNYLGAEKVIWLPYGIY 206
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKSVLVPQFEDVN-DQVALDILSECFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|155371753|ref|YP_001427287.1| hypothetical protein ATCV1_Z806R [Acanthocystis turfacea Chlorella
virus 1]
gi|155125073|gb|ABT16940.1| hypothetical protein ATCV1_Z806R [Acanthocystis turfacea Chlorella
virus 1]
Length = 362
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 124/215 (57%), Gaps = 14/215 (6%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E H + +M +P R DNWR++A +AQ A +A ISK E V +
Sbjct: 3 TPKQDGFRMPGEFEHHDRTFMTFP---HRPDNWRNNAKNAQHAIADLAREISKHEEVVMI 59
Query: 66 ASAAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
A S + N+++ + W RDTG T V N + ++ GI W+F
Sbjct: 60 TPREHMYTAVSLFHDTNVKITAFDSDDCWTRDTGATFVSNGN---------ELRGISWDF 110
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECL 183
N+WGG DGCY W D ++A ++ + + VLEGGS+HVDG+GTC+TTEECL
Sbjct: 111 NAWGGHYDGCYTSWDKDSKIAGRMCAVANASVYRTEGFVLEGGSVHVDGDGTCITTEECL 170
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
L+ RNPHL+KG IE+ LK +L V K++WL G+
Sbjct: 171 LSGGRNPHLSKGDIEHMLKEHLNVDKVLWLKHGVI 205
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G++ G A PR G RLAASYVNF + NG II P FGD ++D A+ L FP+ EV G
Sbjct: 279 GIVRSGHALPRNVGDRLAASYVNFVMPNGAIIFPTFGDDEYDARALETLKSIFPEREVTG 338
Query: 279 IERAREIVLGGGNIHCITQQQPAI 302
+ +REI+LGGGN+HC+TQQQP++
Sbjct: 339 L-YSREILLGGGNLHCVTQQQPSV 361
>gi|310641921|ref|YP_003946679.1| agmatine deiminase [Paenibacillus polymyxa SC2]
gi|386040913|ref|YP_005959867.1| Agmatine deiminase [Paenibacillus polymyxa M1]
gi|309246871|gb|ADO56438.1| Agmatine deiminase [Paenibacillus polymyxa SC2]
gi|343096951|emb|CCC85160.1| Agmatine deiminase [Paenibacillus polymyxa M1]
Length = 343
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 152/278 (54%), Gaps = 35/278 (12%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
Y MP EW PH + ++ WPV+ + + + + +A++ +A+++FEPVTV +
Sbjct: 8 YKMPPEWAPHERTYISWPVQSSMV--YPEMHAEVSKGYAEIISAMAEFEPVTVVVNPDDL 65
Query: 72 ENARS-QLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
E+ ++ +L E + ++ + + +W RD GPT + ++ ++AG++W FN+WGG
Sbjct: 66 ESVKALELGERVELLPIEHSDAWLRDNGPTFLTDEHG--------QLAGVNWMFNAWGGK 117
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
Y W LD QVA +IL +PR +V+EGGS+HVDGEGT +TTEECLLN NRNP
Sbjct: 118 ----YAPWDLDDQVAPQILDKLGVPRLDAPLVMEGGSLHVDGEGTLITTEECLLNPNRNP 173
Query: 191 HLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGII 250
L++ +IE + Y G KIIWL RGL G DG + + A G +I
Sbjct: 174 ELSREEIERYVCEYTGAEKIIWLKRGLSGDETDGH-----------VDNIACFAAPGKVI 222
Query: 251 T-----PQFGDKKWDGEAVRVLSQAFP----KYEVVGI 279
P+ + + E +R+L QA K EV+ I
Sbjct: 223 MQVCDDPEDENYEITQENLRILEQATDAKGRKLEVIQI 260
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 233 TRLAASYVNFYIANGGIITPQFGDK--KWDGEAVRVLSQAFPKYEVVGIERAREIVLGGG 290
+RL SY+NFY NGGII P FG + D A +VL++ FP ++ ++ ++ GG
Sbjct: 271 SRLTLSYINFYFVNGGIILPVFGGTAAESDLAAQQVLAKVFPNRKIRTVD-GMAVIREGG 329
Query: 291 NIHCITQQQPAI 302
N+HC TQQ PA+
Sbjct: 330 NVHCTTQQMPAV 341
>gi|419964925|ref|ZP_14480875.1| agmatine deiminase [Rhodococcus opacus M213]
gi|414569644|gb|EKT80387.1| agmatine deiminase [Rhodococcus opacus M213]
Length = 340
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/348 (32%), Positives = 161/348 (46%), Gaps = 72/348 (20%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAE E H + WM +P L + ++ A+ +A+VA A+++FEPVTV Q
Sbjct: 5 MPAEGELHERTWMAYPSEGYSLGDTPEEHHEARTTWAEVAHAVARFEPVTVVVDPGQVSA 64
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
A L +I ++ +N +W RD GPT V+++ ++ G+DW FN WGG D
Sbjct: 65 AEEYLSADIDIVAAPLNDAWMRDIGPTFVLSEDG--------RLGGVDWIFNGWGGQD-- 114
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ W D ++ ++ +V EGG I VDG GT L TE L+ RNP L+
Sbjct: 115 -WAQWDKDEKIGALVVERSGAELVDSPIVNEGGGIQVDGLGTVLVTETVQLDPGRNPELS 173
Query: 194 KGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIHD------- 223
K IE EL +G K+IWLPRGL +G ++HD
Sbjct: 174 KADIEAELARTIGATKVIWLPRGLTRDQDTYGTRGHVDIVAAIPSPGVVLVHDQRNPEHP 233
Query: 224 -------------------GEA-----KPRLAGTRLAASYVNF-----YIANGGIITPQF 254
GE+ P R +V++ ++ NGG+I F
Sbjct: 234 DFEVSKAVIDVLKQTTDARGESWEIITVPAPTVLRDEEGFVDYSYINHFVVNGGVIACSF 293
Query: 255 GDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
D D EAV +LS A+P VV ++ AR + GG IHCITQ QPA+
Sbjct: 294 DDPA-DEEAVAILSAAYPGRTVVSVD-ARPLFARGGGIHCITQHQPAV 339
>gi|374996475|ref|YP_004971974.1| peptidylarginine deiminase-like protein [Desulfosporosinus orientis
DSM 765]
gi|357214841|gb|AET69459.1| peptidylarginine deiminase-like enzyme [Desulfosporosinus orientis
DSM 765]
Length = 345
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 132/221 (59%), Gaps = 15/221 (6%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
P Y MP EW H + ++ WP++ + +D + +A++ AI++FEPVT+ A
Sbjct: 3 PINLNYRMPPEWARHIRTYISWPIKASMC--FPEDYEAVCQGYAEIIRAIAEFEPVTIVA 60
Query: 67 SAAQWENARSQLPEN-IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
++A ++ + + N I V+ + N +W RD GPT +++ +AG++W FN
Sbjct: 61 NSADFQKISALVHRNNIEVLRIEHNDAWLRDNGPTFLIHDDGT--------LAGVNWQFN 112
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WGG Y W LD QVA +IL+ L +F +V+EGGS HVDGEGT LTTE+CLLN
Sbjct: 113 AWGGK----YTPWDLDNQVAGEILTHVGLKQFDAPLVMEGGSFHVDGEGTLLTTEQCLLN 168
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEA 226
NRNP +++ QIE ELK +L + KI+WL +GL G DG
Sbjct: 169 PNRNPGMSREQIEAELKRFLHIQKIVWLNKGLAGDETDGHV 209
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 230 LAGTRLAASYVNFYIANGGIITPQFGD--KKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
+ RL SY+NFY NGGI+ P FG K++D AV VLS FP + + + I+
Sbjct: 270 VTNKRLTLSYLNFYFVNGGIVLPVFGGEAKEYDQSAVNVLSATFPNRRIRTV-KGMGIIR 328
Query: 288 GGGNIHCITQQQP 300
GGN+HC TQQ P
Sbjct: 329 EGGNVHCTTQQMP 341
>gi|306825223|ref|ZP_07458565.1| agmatine deiminase [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|304432659|gb|EFM35633.1| agmatine deiminase [Streptococcus sp. oral taxon 071 str. 73H25AP]
Length = 361
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 122/217 (56%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M TP GY MPAE+EPH M WP R +W AQ+ F+++ I++ E V
Sbjct: 1 MIETPKKAGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAQKAFSQIIKTIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L + + +++ N +W RDTGPTI++N+ IDW
Sbjct: 58 YLLVEQDYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILLNEKREK--------LAIDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA T +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEADDQVASLFAETLEMPVYEAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHL+K +IEN L LG K+IWLP G++
Sbjct: 170 CLLSAGRNPHLSKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 50/66 (75%), Gaps = 2/66 (3%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
LAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIHC
Sbjct: 297 LAASYVNFYIANKAVLVPQFKDVN-DQVALDILSKCFPDRQVVGIP-ARDILLGGGNIHC 354
Query: 295 ITQQQP 300
ITQQ P
Sbjct: 355 ITQQIP 360
>gi|315613157|ref|ZP_07888067.1| agmatine deiminase [Streptococcus sanguinis ATCC 49296]
gi|315314719|gb|EFU62761.1| agmatine deiminase [Streptococcus sanguinis ATCC 49296]
Length = 361
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M TP GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MIETPKKAGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIKTIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L E + +++ N +W RDTGPTI++N +DW
Sbjct: 58 YLLVEQDHLSEAQSYLGEKVVYLDIPTNDAWARDTGPTILINDKKEK--------LAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEEDDQVASRFAEVLEIPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHL+K +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPHLSKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKSVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|417940719|ref|ZP_12584007.1| agmatine deiminase [Streptococcus oralis SK313]
gi|343389600|gb|EGV02185.1| agmatine deiminase [Streptococcus oralis SK313]
Length = 361
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 123/217 (56%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F+++ I++ E V
Sbjct: 1 MMDSPKKLGYRMPAEYEPHHGTIMIWPTR---PGSWPFQGKAAKRAFSQIIKIIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L +++ +++ N +W RDTGPTI+VN A +DW
Sbjct: 58 YILVEQDHLSEAQSYLGDSVVYLDIPTNDAWARDTGPTILVNDKRAK--------LAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGTVDGLYQDYEEDDQVASRFAEALEMPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHL+K +IEN L LG K+IWLP G++
Sbjct: 170 CLLSTGRNPHLSKEEIENTLLECLGAEKVIWLPYGIY 206
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKSVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|406699525|gb|EKD02727.1| Agmatine deiminase [Trichosporon asahii var. asahii CBS 8904]
Length = 392
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/328 (36%), Positives = 161/328 (49%), Gaps = 59/328 (17%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHA-QRVFAKVATAISKFEPVTVCASAAQ 70
+ MP E EPH++ WM + W D L Q A VA AIS+FEPV++ +
Sbjct: 29 WTMPDEGEPHARTWMAFAWNASI---WTSDLLPVVQENLADVAEAISRFEPVSLLVRSQD 85
Query: 71 WENARSQLP--ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWG 128
AR+ L N+ ++E ++ W RD+GP V S+ V+ +D+NFN WG
Sbjct: 86 MPRARNLLQGVSNVTLVEAQLDDLWVRDSGPVFVRRDSN---------VSAVDFNFNGWG 136
Query: 129 GVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNR 188
+ S D VA I + +P +VLEGG++ VDG GT + TE C+LN NR
Sbjct: 137 N-----KQVHSKDATVAPTIANDSGVPLLHTELVLEGGALEVDGNGTAIITESCVLNDNR 191
Query: 189 NPHLTKGQIENELKAYLGVMKIIWLPRGLFGM-IHDG-----------------EAKPRL 230
NP +K +E ELK LG+ KIIWLP G+ G I DG +AK R
Sbjct: 192 NPGWSKADVEAELKYLLGIDKIIWLP-GIRGKDITDGYDHNVTLTHLDILKNATDAKGRT 250
Query: 231 AGTR-------------------LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAF 271
AA Y+N+Y+ NGG+I PQFGD K D +A +LS +
Sbjct: 251 LNVTTLTAPWADKRRKEYQDDEDFAAGYINYYLVNGGVIMPQFGDTKADRDARDILSAMY 310
Query: 272 PKYEVVGIERAREIVLGGGNIHCITQQQ 299
P EVV + I GGG IHC TQQ+
Sbjct: 311 PDREVVAVN-IDGIAAGGGGIHCSTQQE 337
>gi|419780110|ref|ZP_14305960.1| agmatine deiminase [Streptococcus oralis SK100]
gi|383185269|gb|EIC77765.1| agmatine deiminase [Streptococcus oralis SK100]
Length = 361
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 123/217 (56%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M TP G+ MPAE+EPH M WP R +W A+R F+++ I++ E V
Sbjct: 1 MIETPKKLGFRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFSQIIKNIAQGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN +DW
Sbjct: 58 YLLVDQAHLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKREK--------LAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + ++P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEEDDQVASRFAEILKIPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHL+K +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPHLSKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 50/66 (75%), Gaps = 2/66 (3%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
LAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIHC
Sbjct: 297 LAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIHC 354
Query: 295 ITQQQP 300
ITQQ P
Sbjct: 355 ITQQIP 360
>gi|270292721|ref|ZP_06198932.1| agmatine deiminase [Streptococcus sp. M143]
gi|270278700|gb|EFA24546.1| agmatine deiminase [Streptococcus sp. M143]
Length = 361
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 121/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F+++ I++ E V
Sbjct: 1 MMDSPKKLGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFSQIIKTIAEGETV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L + + +++ N +W RDTGPTI+VN +DW
Sbjct: 58 YLLVEQDYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKREK--------LAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEDDDQVASRFAEVLEMPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHL+K QIEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPHLSKEQIENTLLESLGAEKVIWLPYGIY 206
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 2/66 (3%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
LAASYVNFYIAN ++ PQF DK D A+ +LS FP +VVGI AR+I+LGGGNIHC
Sbjct: 297 LAASYVNFYIANKAVLVPQFQDKN-DQVALDILSNYFPDRKVVGIP-ARDILLGGGNIHC 354
Query: 295 ITQQQP 300
ITQQ P
Sbjct: 355 ITQQIP 360
>gi|291294474|ref|YP_003505872.1| Agmatine deiminase [Meiothermus ruber DSM 1279]
gi|290469433|gb|ADD26852.1| Agmatine deiminase [Meiothermus ruber DSM 1279]
Length = 348
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 168/351 (47%), Gaps = 67/351 (19%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N TP G+ MPAEW PH+ W WP E+ W ++ FA +++FEPV
Sbjct: 3 NLTPRALGFRMPAEWAPHAATWTAWPYDEEK---WLGYLEPVRQEFAAFVNTLARFEPVH 59
Query: 64 VCASAAQWE-NARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ + E +AR +L I + + W RD+G I V ++ S + VA ++W
Sbjct: 60 LVLHDEESERDARQRLAGPITFHRIPHDDLWLRDSG-AIFVTRTPPSGPVE---VAAVNW 115
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN WGG +D + LQ+AR + + F +V+EGGS+ V+G+G LTT +C
Sbjct: 116 EFNGWGG-KYPAQQDNQMPLQMARIL----GMGLFEAGIVMEGGSLEVNGQGVGLTTRQC 170
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGE-------AKP------- 228
LL+ RNP L + +E L+ +LG+ +IWL GL G DG A P
Sbjct: 171 LLSPARNPGLDEEALEGYLQQFLGIEHLIWLGNGLEGDHTDGHIDTLTRFASPYTIVTAV 230
Query: 229 --------------------RLAGTR------------------LAASYVNFYIANGGII 250
L G R L +Y NFYIANG ++
Sbjct: 231 CPDPDDPNHRPLQENLEILRSLGGFRIVELPLPKNPLWLDSETRLPLTYANFYIANGAVL 290
Query: 251 TPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
P +GD D +A+ +L FP EV+G++ +R ++ GGG+ HC+TQQQPA
Sbjct: 291 VPIYGDPH-DEQALEILRPLFPGREVIGLQ-SRYLITGGGSFHCVTQQQPA 339
>gi|326776399|ref|ZP_08235664.1| Agmatine deiminase [Streptomyces griseus XylebKG-1]
gi|326656732|gb|EGE41578.1| Agmatine deiminase [Streptomyces griseus XylebKG-1]
Length = 347
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 156/351 (44%), Gaps = 75/351 (21%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+ MP EW PH + WM WP + + A+ + VA A+ +FEPVT+ Q
Sbjct: 8 FRMPPEWAPHERTWMAWPGPNPTFAS-DAELARARGAWVAVARAVRRFEPVTMVVGPGQE 66
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
E A + L ++ ++ ++ +W RD GPT V + S+ +A +DW FN WG
Sbjct: 67 EGAAALLGPDVELVVRPLDDAWMRDIGPTFVTDGST---------LAAVDWTFNGWGA-- 115
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
G R W D +AR + P +V EGG+IHVDGEGT L TE L + RNP
Sbjct: 116 QGWAR-WESDQHIARAVAELTGAPAHSSPLVNEGGAIHVDGEGTVLLTETVQLGRERNPG 174
Query: 192 LTKGQIENELKAYLGVMKIIWLPR------GLFG-----------------MIH------ 222
++ Q+E E+ A LG K IWLPR G +G ++H
Sbjct: 175 WSRAQVEAEIHARLGTEKAIWLPRGLTADYGTYGTLGHVDIVAAFARPGTVLVHVQPDLA 234
Query: 223 --DGEAKPRLAGTRLAA-----------------------------SYVNFYIANGGIIT 251
D E L+ AA SY+N Y+ N G++
Sbjct: 235 HPDHEVTRELSAVLRAATDARGRALEVVEVPAPTVLRDEDGEWADYSYINHYLCNDGVVL 294
Query: 252 PQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
F D + D EA + FP V ++ AR I GGG IHC+TQQQP +
Sbjct: 295 CAFDDPR-DEEAAAIFRGLFPDRTVTLVD-ARTIFAGGGGIHCVTQQQPKV 343
>gi|419817226|ref|ZP_14341393.1| agmatine deiminase [Streptococcus sp. GMD4S]
gi|404466241|gb|EKA11590.1| agmatine deiminase [Streptococcus sp. GMD4S]
Length = 361
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 121/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A++ F+++ I++ E V
Sbjct: 1 MMDSPKKLGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKKAFSQIIKTIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L E + +++ N +W RDTGPTI+VN +DW
Sbjct: 58 YLLVEQDHLSEAQSYLGEKVVYLDIPTNDAWARDTGPTILVNDKRER--------LAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEEDNQVASRFAEVLEIPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHL+K QIEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPHLSKEQIENTLLESLGAEKVIWLPYGIY 206
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKSVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|251794248|ref|YP_003008979.1| agmatine deiminase [Paenibacillus sp. JDR-2]
gi|247541874|gb|ACS98892.1| Agmatine deiminase [Paenibacillus sp. JDR-2]
Length = 344
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 125/220 (56%), Gaps = 16/220 (7%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
P Y MPAEW H + ++ WPV+ + + + +A++ TAI++FEP+TV
Sbjct: 3 PKQLNYTMPAEWAAHERTFISWPVQASMV--YPEHYEQVSAGYAELVTAIAEFEPITVVV 60
Query: 67 SAAQWENARSQLPEN--IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
+ A E + N + + + N +W RD GPT VVN ++AG++W F
Sbjct: 61 NPADLEKVSALFAGNDAVECLPVEHNDAWLRDNGPTFVVNPEG--------ELAGVNWKF 112
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL 184
N+WGG Y W LD VA +IL + +F +V+EGGSIH DGEGT LTTEECLL
Sbjct: 113 NAWGGK----YSPWDLDDAVAPQILKHVGVKQFDAPLVMEGGSIHTDGEGTLLTTEECLL 168
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
N NRNP L++ QIE +K ++ V I+WL RGL G DG
Sbjct: 169 NTNRNPELSREQIEGYVKEFVNVDTIVWLKRGLSGDETDG 208
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 233 TRLAASYVNFYIANGGIITPQFGD--KKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGG 290
TRL SY+NFY NGGII P FG ++ D +A+ L AF + I+ ++ GG
Sbjct: 272 TRLTLSYLNFYFVNGGIILPVFGGAAEEADRKAIETLQAAFADRRIRPID-GMAVIREGG 330
Query: 291 NIHCITQQQPA 301
N+HC TQQ PA
Sbjct: 331 NVHCTTQQMPA 341
>gi|312129914|ref|YP_003997254.1| agmatine deiminase [Leadbetterella byssophila DSM 17132]
gi|311906460|gb|ADQ16901.1| agmatine deiminase [Leadbetterella byssophila DSM 17132]
Length = 351
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 165/356 (46%), Gaps = 78/356 (21%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
PA +GY PAEW P W+ +P+ D W D + + +I+ + V + A
Sbjct: 4 PAENGYFFPAEWHPQVATWLSFPINK---DTWEDRFDRIYPAYFEFIKSIALSQKVKINA 60
Query: 67 S-AAQWENARSQLPE------NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
+ A + R++L E + + N SW RD GP +++K + S
Sbjct: 61 NDEATIQFIRTKLEEYNIPASQVELYPFPTNDSWCRDHGPAFLIHKENDSRMI------- 113
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTT 179
+DW +N+WGG Y + D + +I +LP +V+EGGS+ +G+GT LT+
Sbjct: 114 VDWEYNAWGGK----YPPYDSDNAIPSRIAEVLQLPSVKTGIVMEGGSVEFNGKGTVLTS 169
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG--------------- 224
+ CLLNKNRNPHLT+ +IE L+ Y GV +++W+ G+ G DG
Sbjct: 170 KSCLLNKNRNPHLTQEEIEAYLRDYYGVEQVLWVEDGIVGDDTDGHIDDTVRFVNEDTVI 229
Query: 225 ---EAKPRLA-------------------------------------GTRLAASYVNFYI 244
E+ P A G RL ASY NF I
Sbjct: 230 TVVESNPEDANFAPLKENLEALKKMKLPDGRSLNIVEIQMPDPVYSDGIRLPASYANFLI 289
Query: 245 ANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
NG +I P F K D A++++ + F +VVGI+ A EI+ G G+ HC++QQ+P
Sbjct: 290 TNGHVIVPTFRSKH-DERALQIIQECFKTRKVVGID-ATEIIWGLGSFHCLSQQEP 343
>gi|358464958|ref|ZP_09174916.1| agmatine deiminase [Streptococcus sp. oral taxon 058 str. F0407]
gi|357066487|gb|EHI76637.1| agmatine deiminase [Streptococcus sp. oral taxon 058 str. F0407]
Length = 361
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 121/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A++ F+++ I++ E V
Sbjct: 1 MMDSPKKLGYRMPAEYEPHHGTLMIWPTRS---GSWPFQGKAAKKAFSQIIKTIAERERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L + + +++ N +W RDTGPTI+VN +DW
Sbjct: 58 YLLVEQDYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKREK--------LAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEADDQVASRFAEALEMPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHLTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPHLTKEEIENTLLESLGAKKVIWLPYGIY 206
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 50/66 (75%), Gaps = 2/66 (3%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
LAASY+NFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIHC
Sbjct: 297 LAASYINFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIHC 354
Query: 295 ITQQQP 300
ITQQ P
Sbjct: 355 ITQQIP 360
>gi|293365438|ref|ZP_06612147.1| agmatine deiminase [Streptococcus oralis ATCC 35037]
gi|307703393|ref|ZP_07640335.1| agmatine deiminase [Streptococcus oralis ATCC 35037]
gi|291315806|gb|EFE56250.1| agmatine deiminase [Streptococcus oralis ATCC 35037]
gi|307622800|gb|EFO01795.1| agmatine deiminase [Streptococcus oralis ATCC 35037]
Length = 361
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 121/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M TP GY MPAE+EPH M WP R +W A+R F+++ I++ E V
Sbjct: 1 MIETPKKAGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFSQIIKTIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L + + +++ N +W RDTGPTI++N +DW
Sbjct: 58 YLLVEQDYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILINDKKEK--------LAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEEDNQVASRFAEALEMPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHL+K +IE L YLG K++WLP G++
Sbjct: 170 CLLSAGRNPHLSKEEIERRLLNYLGAEKVVWLPYGIY 206
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 50/66 (75%), Gaps = 2/66 (3%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
LAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIHC
Sbjct: 297 LAASYVNFYIANKSVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIHC 354
Query: 295 ITQQQP 300
ITQQ P
Sbjct: 355 ITQQIP 360
>gi|443328337|ref|ZP_21056936.1| peptidylarginine deiminase-like enzyme [Xenococcus sp. PCC 7305]
gi|442792049|gb|ELS01537.1| peptidylarginine deiminase-like enzyme [Xenococcus sp. PCC 7305]
Length = 367
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 161/345 (46%), Gaps = 65/345 (18%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDAL-HAQRVFAKVATAISKFEPVTV 64
TP G+ PAEW PH M + R NW + A++ +A VA +S+FEPV +
Sbjct: 40 TPKQDGFYFPAEWHPHEYTIMQFVPR----QNWAGYGIRQARKDWATVANTLSEFEPVLM 95
Query: 65 CASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
A+ L +I ++E +N W RD+GP+ VVN +V G + F
Sbjct: 96 VVDPQDRVIAKKLLSSDIELVEFPLNDGWARDSGPSFVVNNQGER------RVTG--FTF 147
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL 184
N WG + + D ++ ++ ++P + +VLEGG++ +DGEGT +TTEECLL
Sbjct: 148 NGWGAK----FPPYDDDAKLRARLCEYLQVPFYEADLVLEGGAVTLDGEGTLITTEECLL 203
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL--------------------------- 217
N NRNP +K Q+E LK V K+IWL +G
Sbjct: 204 NPNRNPDKSKSQVEQILKESFNVSKVIWLGKGTTPDPITDGHVDGICVFVAPGTVMLHTT 263
Query: 218 -------FGMIHDGEAK---------PRLAGTRLAASY----VNFYIANGGIITPQFGDK 257
+ + D +AK +L L +Y +NFYIANG ++ P D
Sbjct: 264 DDLNDPNYQICQDAKAKLLAESNSKDRQLEIIELPLAYDVAHINFYIANGCVLVPIANDP 323
Query: 258 KWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
D A+ ++ AF + EV+GI + GGG IHCITQQ P I
Sbjct: 324 AQDDAALSIIRNAFGEREVIGIS-GEILAKGGGGIHCITQQVPMI 367
>gi|410724436|ref|ZP_11363627.1| peptidylarginine deiminase-like enzyme [Clostridium sp. Maddingley
MBC34-26]
gi|410602136|gb|EKQ56624.1| peptidylarginine deiminase-like enzyme [Clostridium sp. Maddingley
MBC34-26]
Length = 347
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 125/215 (58%), Gaps = 15/215 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQ 70
Y MPAEW H + ++ WPV+ +++ + + AI++FEPV+V + +
Sbjct: 7 NYKMPAEWTTHERTFISWPVKESMCHPENHESVCLG--YTEFIKAIAEFEPVSVIVNPNE 64
Query: 71 WENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
E + E NI + + + +W RD GPT ++NK AG++W FN+WGG
Sbjct: 65 LEIVKKFFNESNIEFLPIEHSDAWLRDNGPTFIINKDGDR--------AGVNWRFNAWGG 116
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
Y W LD +VA +IL + +F +++EGGSIHVDGEGT +TTEECLLN NRN
Sbjct: 117 K----YAPWDLDDKVALQILEHYNIEKFDAPLIMEGGSIHVDGEGTLITTEECLLNPNRN 172
Query: 190 PHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
P+L++ QIEN LK YL + KIIWL GL G DG
Sbjct: 173 PNLSREQIENYLKQYLNIEKIIWLKNGLNGDETDG 207
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 227 KPRLAGTRLAASYVNFYIANGGIITPQFGD--KKWDGEAVRVLSQAFPKYEVVGIERARE 284
K G RL SY+NFY N GII P FG ++ D A ++LS FP ++ ++
Sbjct: 265 KAEYNGLRLTLSYLNFYFVNNGIILPTFGGPAEESDKMAEKILSSTFPDRKIRTVD-GMA 323
Query: 285 IVLGGGNIHCITQQQP 300
++ GGN+HC TQQ P
Sbjct: 324 VIKEGGNVHCTTQQMP 339
>gi|401887774|gb|EJT51752.1| Agmatine deiminase [Trichosporon asahii var. asahii CBS 2479]
Length = 392
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/328 (36%), Positives = 160/328 (48%), Gaps = 59/328 (17%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHA-QRVFAKVATAISKFEPVTVCASAAQ 70
+ MP E EPH++ WM + W D L Q A VA AIS+FEPV++ +
Sbjct: 29 WTMPDEGEPHARTWMAFAWNASI---WTSDLLPVVQENLADVAEAISRFEPVSLLVRSQD 85
Query: 71 WENARSQLP--ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWG 128
AR+ L N+ ++E ++ W RD+GP V S+ V+ +D+NFN WG
Sbjct: 86 MPRARNLLQGVSNVTLVEAQLDDLWVRDSGPVFVRRDSN---------VSAVDFNFNGWG 136
Query: 129 GVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNR 188
+ S D VA I + +P +VLEGG++ VDG GT + TE C+LN NR
Sbjct: 137 N-----KQMHSKDATVAPTIANDSGVPLLHTELVLEGGALEVDGNGTAIITESCVLNDNR 191
Query: 189 NPHLTKGQIENELKAYLGVMKIIWLPRGLFGM-IHDG-----------------EAKPRL 230
NP +K +E ELK LG+ KIIWLP G+ G I DG +AK R
Sbjct: 192 NPGWSKADVEAELKYLLGIDKIIWLP-GIRGKDITDGYDHNVTLTHLDILKNATDAKGRT 250
Query: 231 AGTR-------------------LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAF 271
AA Y+N+Y+ NGG+I PQFGD K D +A +LS +
Sbjct: 251 LNVTTLTAPWADKRRKEYQDDEDFAAGYINYYLVNGGVIMPQFGDTKADRDARDILSAMY 310
Query: 272 PKYEVVGIERAREIVLGGGNIHCITQQQ 299
P EVV I GGG IHC TQQ+
Sbjct: 311 PDREVVAFN-IDGIAAGGGGIHCSTQQE 337
>gi|308069005|ref|YP_003870610.1| peptidylarginine deiminase [Paenibacillus polymyxa E681]
gi|305858284|gb|ADM70072.1| Peptidylarginine deiminase [Paenibacillus polymyxa E681]
Length = 343
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 128/215 (59%), Gaps = 17/215 (7%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERL-DNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQ 70
Y MP EW PH + ++ WPV+ + N D +A + A+++FEPVTV +
Sbjct: 8 YKMPPEWAPHERTYISWPVKSSMVYPNMHADVCKG---YAGIVRAMAEFEPVTVVVNPDD 64
Query: 71 WENARS-QLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
E+ ++ +L E + ++ + + +W RD GPT + ++ ++AG++W FN+WGG
Sbjct: 65 LESVKALELGERVELLPIEHSDAWLRDNGPTFLTDEHG--------QLAGVNWKFNAWGG 116
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
Y W LD QVA +IL + RF +V+EGGS+HVDGEGT +TTEECLLN NRN
Sbjct: 117 K----YAPWDLDDQVAPQILDQLGVLRFDAPLVMEGGSLHVDGEGTLITTEECLLNSNRN 172
Query: 190 PHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
P L++ +IE + Y GV KIIWL RGL G DG
Sbjct: 173 PELSREEIERYVCEYTGVEKIIWLKRGLSGDETDG 207
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 233 TRLAASYVNFYIANGGIITPQFGDK--KWDGEAVRVLSQAFPKYEVVGIERAREIVLGGG 290
+RL SY+NFY NGGII P FG + D A +VL+ FP + ++ I+ GG
Sbjct: 271 SRLTLSYINFYFVNGGIILPVFGGTAAESDLAAEQVLANVFPDRTIRTVD-GMAIIREGG 329
Query: 291 NIHCITQQQPAI 302
N+HC TQQ PA+
Sbjct: 330 NVHCTTQQMPAV 341
>gi|322374304|ref|ZP_08048818.1| agmatine deiminase [Streptococcus sp. C300]
gi|321279804|gb|EFX56843.1| agmatine deiminase [Streptococcus sp. C300]
Length = 361
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 121/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F++++ I++ E V
Sbjct: 1 MMDSPKKLGYRMPAEYEPHHGTIMIWPTR---PGSWPFQGKAAKRAFSQISKTIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L + + + + N +W RDTGPTI+VN +DW
Sbjct: 58 YLLVEQDYLSEAQSYLGDKVVYLYIPTNDAWARDTGPTILVNDKRDK--------LAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGGSIH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEEDNQVASRFAEVLEMPVYDAKPFVLEGGSIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHLTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPHLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKSVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|419503734|ref|ZP_14043403.1| agmatine deiminase [Streptococcus pneumoniae GA47760]
gi|379606411|gb|EHZ71158.1| agmatine deiminase [Streptococcus pneumoniae GA47760]
Length = 361
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 121/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKDAKRAFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + T P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAETLERPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|419782171|ref|ZP_14307980.1| agmatine deiminase [Streptococcus oralis SK610]
gi|383183275|gb|EIC75812.1| agmatine deiminase [Streptococcus oralis SK610]
Length = 361
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 125/217 (57%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M TP GY MPAE+EPH M WP R +W A++ F+++ I++ E V
Sbjct: 1 MIETPKKAGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKKAFSQIIETIAQGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L + + +++ N +W RDTGPTI+VN + K+A +DW
Sbjct: 58 YLLVEQDYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVND-------KRDKLA-VDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEEDNQVASRFAEALEMPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHL+K +IE L YLG K+IWLP G++
Sbjct: 170 CLLSAGRNPHLSKEEIERRLLNYLGAEKVIWLPYGIY 206
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 50/66 (75%), Gaps = 2/66 (3%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
LAASYVNFYIAN ++ PQF D D A+ +LS+ FP +V+GI AR+I+LGGGNIHC
Sbjct: 297 LAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVIGIP-ARDILLGGGNIHC 354
Query: 295 ITQQQP 300
ITQQ P
Sbjct: 355 ITQQIP 360
>gi|385260317|ref|ZP_10038465.1| agmatine deiminase [Streptococcus sp. SK140]
gi|385191581|gb|EIF38994.1| agmatine deiminase [Streptococcus sp. SK140]
Length = 361
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 121/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A++ F+++ I + E V
Sbjct: 1 MMDSPKKLGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKKAFSQIIKTIDQGETV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L +++ +++ N +W RDTGPTI+VN +DW
Sbjct: 58 YLLVEQDYLSEAQSYLGDSVVYLDIPTNDAWARDTGPTILVNDKKEK--------LAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEADDQVASRFAEVLEIPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPH+TK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPHMTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D+ D A+ +LSQ FP EVVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKSVLVPQFQDEN-DQVALDILSQCFPDREVVGI-LARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|225377632|ref|ZP_03754853.1| hypothetical protein ROSEINA2194_03283 [Roseburia inulinivorans DSM
16841]
gi|225210496|gb|EEG92850.1| hypothetical protein ROSEINA2194_03283 [Roseburia inulinivorans DSM
16841]
Length = 380
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 124/216 (57%), Gaps = 13/216 (6%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N TP G+ MP E+EP + WP +R +W +A A +VFA++A +++ E V
Sbjct: 20 NRTPHQDGFYMPGEFEPQDGVILIWP---KRPGSWPYEAKEAGKVFAEIANKLAETEKVY 76
Query: 64 VCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWN 123
+ AR L EN+ ++ + + +W RD GPT V + +V G++W+
Sbjct: 77 MLTEPETEAAARELLCENVEILTIPTDDAWARDVGPTFVTD---------GKEVRGVNWS 127
Query: 124 FNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHS-MVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG DG Y+DW D +VA + + + VLEGGSIH DG+GT + TE C
Sbjct: 128 FNAWGGTYDGLYQDWQKDDKVAEEFCKLTGYDYYDAAPFVLEGGSIHSDGQGTVIATEAC 187
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
LL+K RNP LTK QIE +L+ YLG KIIWLP G++
Sbjct: 188 LLSKGRNPELTKEQIEAKLQEYLGAEKIIWLPNGIY 223
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 215 RGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKY 274
+ L G + + R AG RLAASYVNFYI N ++ PQFGD+ D A +L + FP+
Sbjct: 294 KELAGYVFEEGEDTREAGERLAASYVNFYIGNQVVLVPQFGDEH-DVLATDLLQKLFPER 352
Query: 275 EVVGIERAREIVLGGGNIHCITQQQP 300
E+V + AREI++GGGNIHCITQQ P
Sbjct: 353 EIVPV-FAREIIIGGGNIHCITQQIP 377
>gi|291562589|emb|CBL41405.1| agmatine deiminase [butyrate-producing bacterium SS3/4]
Length = 370
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 121/222 (54%), Gaps = 16/222 (7%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
+++ PA G+ MP E+E H C M WP +R +W A A+ F +VA AI++ E
Sbjct: 3 KLHTIPAADGFRMPGEFESHRGCIMIWP---KRPGSWNYGAKKAREAFKRVAWAIAESEE 59
Query: 62 VTVCASAAQWENARSQLPEN----IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKV 117
V + A ENAR L N I VI M + +W RD PT VVN V
Sbjct: 60 VFMLAEPDVEENAREMLSGNPGHGIHVIRMESDDAWARDVAPTFVVNGEGT--------V 111
Query: 118 AGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTC 176
GIDW FN+WGG DG Y W D VA K+ + H VLEGGSIH DGEGT
Sbjct: 112 RGIDWEFNAWGGTVDGLYAHWEKDDLVAEKVCGELGYDCYEAHPFVLEGGSIHSDGEGTV 171
Query: 177 LTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
L T CLL+ RNP LTK +IE +L AYLG K+IWL RG++
Sbjct: 172 LVTAACLLSGGRNPKLTKDEIEKKLCAYLGAEKVIWLERGIY 213
>gi|297566844|ref|YP_003685816.1| Agmatine deiminase [Meiothermus silvanus DSM 9946]
gi|296851293|gb|ADH64308.1| Agmatine deiminase [Meiothermus silvanus DSM 9946]
Length = 334
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 157/346 (45%), Gaps = 77/346 (22%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWE- 72
MPAEWEPH+ W WP E W +R FA++ I++FEPV + + E
Sbjct: 1 MPAEWEPHAATWTSWPFDEEL---WVGHLEPVRREFAELVRTIARFEPVHLLVRDEEAEE 57
Query: 73 NARSQL-PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
+AR ++ +N+ + ++ W RD GP + + V+ ++W FN+WG
Sbjct: 58 DARRRIGTDNLTYHRLPLDDVWLRDNGPIFI---------RRGQDVSLVNWKFNAWGN-- 106
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
W LD + + + +V+EGGS+ +G+G LTT +CLL+ RNP
Sbjct: 107 ---KYQWRLDNEAPEYVAQYLGAAHWDVPVVMEGGSLEPNGQGVVLTTRQCLLHPQRNPG 163
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG--------------------------- 224
L + QIE L YLG K++WL GL G DG
Sbjct: 164 LNEPQIEGYLGDYLGFTKVLWLEAGLEGDHTDGHIDTIARFINPSTIVTCVEPDASDPNH 223
Query: 225 ----------------EAKP-------------RLAGTRLAASYVNFYIANGGIITPQFG 255
E KP L G RL +Y NFYI NG ++ PQ+G
Sbjct: 224 ATMQANLERLHTFTDLEGKPFEIVELPLPQNRLELLGNRLPPTYANFYIGNGFVVVPQYG 283
Query: 256 DKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
D D A+ +L FP EV+G+ ++R ++ GGG+ HC+TQQQP
Sbjct: 284 DPN-DAVALSILRPLFPGREVIGL-KSRSLITGGGSFHCVTQQQPV 327
>gi|319946805|ref|ZP_08021039.1| agmatine deiminase [Streptococcus australis ATCC 700641]
gi|417919561|ref|ZP_12563091.1| agmatine deiminase [Streptococcus australis ATCC 700641]
gi|319746853|gb|EFV99112.1| agmatine deiminase [Streptococcus australis ATCC 700641]
gi|342832726|gb|EGU67019.1| agmatine deiminase [Streptococcus australis ATCC 700641]
Length = 361
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 125/217 (57%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A++ F+++ I++ E V
Sbjct: 1 MMDSPKKLGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKKAFSQIIKTIAQGETV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L +N+ +++ N +W RDTGPTI++N Q K+A +DW
Sbjct: 58 YLLVEEDYLSEAQSYLGDNVVYLDIQTNDAWARDTGPTILLND-------QREKLA-VDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEADDQVASRFAEVLDIPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHLTK +IE L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPHLTKEEIEKILLESLGAEKVIWLPYGIY 206
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D+ D A+ +LSQ FP EVVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKSVLVPQFRDEN-DQVALDILSQCFPDREVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|406588656|ref|ZP_11063224.1| agmatine deiminase, partial [Streptococcus sp. GMD1S]
gi|404467316|gb|EKA12463.1| agmatine deiminase, partial [Streptococcus sp. GMD1S]
Length = 300
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 121/214 (56%), Gaps = 12/214 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
+P GY MPAE+EPH M WP R +W A++ F+++ I++ E V +
Sbjct: 3 SPKKLGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKKAFSQIIKTIAEGERVYLL 59
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A+S L E + +++ N +W RDTGPTI+VN + +DW+FN
Sbjct: 60 VEQDHLSEAQSYLGEKVVYLDIPTNDAWARDTGPTILVNDKR--------ERLAVDWSFN 111
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE CLL
Sbjct: 112 AWGGAVDGLYQDYEEDNQVASRFAEVLEIPVYDAKPFVLEGGAIHSDGQGTILVTESCLL 171
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
+ RNPHL+K QIEN L LG K+IWLP G++
Sbjct: 172 SPGRNPHLSKEQIENTLLESLGAEKVIWLPYGIY 205
>gi|419779358|ref|ZP_14305234.1| agmatine deiminase [Streptococcus oralis SK10]
gi|383186386|gb|EIC78856.1| agmatine deiminase [Streptococcus oralis SK10]
Length = 361
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 122/217 (56%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M TP GY MPAE+EPH M WP R +W A++ F+++ I++ E V
Sbjct: 1 MIETPKKAGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKKAFSQIIKTIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L + + +++ N +W RDTGPTI+VN +DW
Sbjct: 58 YLLVEQDYLYEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKREK--------LAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEDDDQVASRFSESLEIPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHL+K QIEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPHLSKEQIENTLLESLGAEKVIWLPYGIY 206
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF DK D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAVLVPQFQDKN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|325284196|ref|YP_004256737.1| Agmatine deiminase [Deinococcus proteolyticus MRP]
gi|324316005|gb|ADY27120.1| Agmatine deiminase [Deinococcus proteolyticus MRP]
Length = 359
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 159/353 (45%), Gaps = 78/353 (22%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTV-CASAA 69
G+ MPAEWEPH WM WP E W +R +A++ I++FEPV + C SA
Sbjct: 15 GFAMPAEWEPHVATWMSWPADDEL---WFGHLEGVRREYAELVRTIARFEPVELLCRSAE 71
Query: 70 QWENARSQL---PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
+AR +L N+ ++ ++ SW RD GP V N + +VA ++W FNS
Sbjct: 72 CEADARERLGADAANVTFHQVPLDDSWVRDNGPIFVRNAAG--------EVALVNWEFNS 123
Query: 127 WGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNK 186
WGG +W D ++ + + + VLEGG + V G+G LTT C L
Sbjct: 124 WGG-----KFEWENDNRIPEYVAEHLGMGHWDRPEVLEGGGLEVTGDGVGLTTRSCFLTD 178
Query: 187 NRNPHLTKGQIENELKAYLGVMKIIWLPRGL----------------------------- 217
RNP LT+ L LGV ++WL GL
Sbjct: 179 TRNPDLTEEGYAALLNDTLGVRNLLWLDGGLENDHTDGHIDTITRFTDPRTIVTSVAEDE 238
Query: 218 --------------FGMIHDGEAKP-----------RLAGT--RLAASYVNFYIANGGII 250
+ D + +P RL G RL +Y NFYI NG +
Sbjct: 239 TDANHAVMAGNLQQLRQMTDAQGQPFYIVELPLPANRLEGAEGRLPPTYANFYIGNGFVA 298
Query: 251 TPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIP 303
PQ+GD D A+ +L FP EV+G+ +R+I+ GGG+ HC+TQQQPA P
Sbjct: 299 VPQYGDPN-DERALEILRPLFPGREVIGLP-SRQIIEGGGSFHCLTQQQPAGP 349
>gi|448926080|gb|AGE49658.1| agmatine deiminase [Acanthocystis turfacea Chlorella virus
Can0610SP]
Length = 362
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 123/215 (57%), Gaps = 14/215 (6%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E H + +M +P R DNWR++A +AQ A +A ISK E V +
Sbjct: 3 TPKQDGFRMPGEFEHHDRTFMTFP---HRPDNWRNNAKNAQHAIADLAREISKHEEVVMI 59
Query: 66 ASAAQWENARSQLPEN-IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
A S L + +++ + W RDTG T V N + ++ GI W+F
Sbjct: 60 TPREHMYTAVSLLHDTKVKITAFDSDDCWTRDTGATFVSNGN---------ELRGISWDF 110
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECL 183
N+WGG DGCY W D ++A ++ + + VLEGGS+HVDG+GTC+TTEECL
Sbjct: 111 NAWGGHYDGCYTSWDKDSKIAGRMCAVANASVYRTEGFVLEGGSVHVDGDGTCITTEECL 170
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
L+ RNPHL+KG IE LK +L V K++WL G+
Sbjct: 171 LSGGRNPHLSKGDIEYMLKEHLNVDKVLWLKYGVI 205
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 219 GMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVG 278
G++ G A PR G RLAASYVNF + NG II P FGD ++D A+ L FP+ EV G
Sbjct: 279 GIVRSGHALPRNVGDRLAASYVNFVMPNGAIIFPTFGDDEYDARALETLKSIFPEREVKG 338
Query: 279 IERAREIVLGGGNIHCITQQQPAI 302
+ +REI+LGGGN+HC+TQQQP +
Sbjct: 339 L-YSREILLGGGNLHCVTQQQPTV 361
>gi|15902866|ref|NP_358416.1| agmatine deiminase [Streptococcus pneumoniae R6]
gi|116516045|ref|YP_816297.1| agmatine deiminase [Streptococcus pneumoniae D39]
gi|421265947|ref|ZP_15716830.1| agmatine deiminase [Streptococcus pneumoniae SPAR27]
gi|73622178|sp|Q8DQ68.1|AGUA_STRR6 RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|122278817|sp|Q04L01.1|AGUA_STRP2 RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|15458423|gb|AAK99626.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
gi|116076621|gb|ABJ54341.1| agmatine deiminase [Streptococcus pneumoniae D39]
gi|395868683|gb|EJG79800.1| agmatine deiminase [Streptococcus pneumoniae SPAR27]
Length = 361
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 121/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP+R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPIR---PGSWPFQGKAAKRAFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|172079519|ref|ZP_02707943.2| agmatine deiminase [Streptococcus pneumoniae CDC1873-00]
gi|417696111|ref|ZP_12345290.1| agmatine deiminase [Streptococcus pneumoniae GA47368]
gi|418091667|ref|ZP_12728809.1| agmatine deiminase [Streptococcus pneumoniae GA44452]
gi|418109888|ref|ZP_12746913.1| agmatine deiminase [Streptococcus pneumoniae GA49447]
gi|418161973|ref|ZP_12798660.1| agmatine deiminase [Streptococcus pneumoniae GA17328]
gi|418169022|ref|ZP_12805666.1| agmatine deiminase [Streptococcus pneumoniae GA19077]
gi|418175737|ref|ZP_12812334.1| agmatine deiminase [Streptococcus pneumoniae GA41437]
gi|418218666|ref|ZP_12845333.1| agmatine deiminase [Streptococcus pneumoniae NP127]
gi|418220974|ref|ZP_12847628.1| agmatine deiminase [Streptococcus pneumoniae GA47751]
gi|418238499|ref|ZP_12865054.1| agmatine deiminase [Streptococcus pneumoniae NorthCarolina6A-23]
gi|419422811|ref|ZP_13963027.1| agmatine deiminase [Streptococcus pneumoniae GA43264]
gi|419459766|ref|ZP_13999699.1| agmatine deiminase [Streptococcus pneumoniae GA02270]
gi|419462084|ref|ZP_14001994.1| agmatine deiminase [Streptococcus pneumoniae GA02714]
gi|419488784|ref|ZP_14028534.1| agmatine deiminase [Streptococcus pneumoniae GA44386]
gi|419525671|ref|ZP_14065235.1| agmatine deiminase [Streptococcus pneumoniae GA14373]
gi|421231690|ref|ZP_15688335.1| agmatine deiminase [Streptococcus pneumoniae 2080076]
gi|421272576|ref|ZP_15723420.1| agmatine deiminase [Streptococcus pneumoniae SPAR55]
gi|172043500|gb|EDT51546.1| agmatine deiminase [Streptococcus pneumoniae CDC1873-00]
gi|332201386|gb|EGJ15456.1| agmatine deiminase [Streptococcus pneumoniae GA47368]
gi|353763767|gb|EHD44317.1| agmatine deiminase [Streptococcus pneumoniae GA44452]
gi|353782800|gb|EHD63230.1| agmatine deiminase [Streptococcus pneumoniae GA49447]
gi|353828356|gb|EHE08496.1| agmatine deiminase [Streptococcus pneumoniae GA17328]
gi|353834864|gb|EHE14960.1| agmatine deiminase [Streptococcus pneumoniae GA19077]
gi|353842305|gb|EHE22352.1| agmatine deiminase [Streptococcus pneumoniae GA41437]
gi|353875321|gb|EHE55173.1| agmatine deiminase [Streptococcus pneumoniae NP127]
gi|353875897|gb|EHE55747.1| agmatine deiminase [Streptococcus pneumoniae GA47751]
gi|353894249|gb|EHE73991.1| agmatine deiminase [Streptococcus pneumoniae NorthCarolina6A-23]
gi|379532792|gb|EHY98016.1| agmatine deiminase [Streptococcus pneumoniae GA02270]
gi|379532930|gb|EHY98153.1| agmatine deiminase [Streptococcus pneumoniae GA02714]
gi|379559145|gb|EHZ24175.1| agmatine deiminase [Streptococcus pneumoniae GA14373]
gi|379587677|gb|EHZ52524.1| agmatine deiminase [Streptococcus pneumoniae GA44386]
gi|379588269|gb|EHZ53114.1| agmatine deiminase [Streptococcus pneumoniae GA43264]
gi|395596180|gb|EJG56402.1| agmatine deiminase [Streptococcus pneumoniae 2080076]
gi|395875685|gb|EJG86763.1| agmatine deiminase [Streptococcus pneumoniae SPAR55]
Length = 361
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 121/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+RVF ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRVFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEALGKPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 88/170 (51%), Gaps = 20/170 (11%)
Query: 149 LSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIENEL---- 201
L E++ P+ + + + HVD + E +L + +P + + EL
Sbjct: 193 LGAEKVIWLPYGIYQDETNEHVDNVAAFVGPAELVLAWTDDENDPQYAMSKADLELLEQE 252
Query: 202 -----------KAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGII 250
K + ++ + L G I++ + R AG RLAASYVNFYIAN ++
Sbjct: 253 TDAKGCHFTIHKLPIPAVRQVVTEEDLPGYIYEEGEEKRYAGERLAASYVNFYIANKAVL 312
Query: 251 TPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIHCITQQ P
Sbjct: 313 VPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIHCITQQIP 360
>gi|421268123|ref|ZP_15718995.1| agmatine deiminase [Streptococcus pneumoniae SPAR95]
gi|395871547|gb|EJG82653.1| agmatine deiminase [Streptococcus pneumoniae SPAR95]
Length = 361
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTIIVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 88/170 (51%), Gaps = 20/170 (11%)
Query: 149 LSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIENEL---- 201
L E++ P+ + + + HVD + E +L + +P + + EL
Sbjct: 193 LGAEKVIWLPYGIYQDETNEHVDNVAAFVGPAELVLAWTDDENDPQYAMSKADLELLEQE 252
Query: 202 -----------KAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGII 250
K + ++ + L G I++ + R AG RLAASYVNFYIAN ++
Sbjct: 253 TDAKGCHFTIHKLPIPAVRQVVTEEDLPGYIYEEGEEKRYAGERLAASYVNFYIANKAVL 312
Query: 251 TPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIHCITQQ P
Sbjct: 313 VPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIHCITQQIP 360
>gi|417938426|ref|ZP_12581724.1| agmatine deiminase [Streptococcus infantis SK970]
gi|343391516|gb|EGV04091.1| agmatine deiminase [Streptococcus infantis SK970]
Length = 361
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 124/217 (57%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A++ F ++ IS+ E V
Sbjct: 1 MMDSPKKLGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKKAFTQIIETISEGETV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L +++ +++ N +W RDTGPTI++N Q K+A +DW
Sbjct: 58 YLLVEQDYLSEAQSYLGDSVVYLDIQTNDAWARDTGPTILLND-------QREKLA-VDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGSVDGLYQDYEADDQVASRFAEVLEIPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHLTK +IE L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPHLTKEEIEKTLLESLGAEKVIWLPYGIY 206
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP EVVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKSVLVPQFQDSN-DQVALDILSKCFPDREVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|421488998|ref|ZP_15936386.1| agmatine deiminase [Streptococcus oralis SK304]
gi|400368215|gb|EJP21230.1| agmatine deiminase [Streptococcus oralis SK304]
Length = 361
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 121/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M TP GY MPAE+EPH M WP R +W A++ F+++ I++ E V
Sbjct: 1 MIETPKKAGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKKAFSQIIKTIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L + + +++ + +W RDTGPTI+VN +DW
Sbjct: 58 YLLVEQDYLSEAKSYLGDKVVYLDIPTDDAWVRDTGPTILVNDKREK--------LAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEADDQVASRFAEALEMPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHL+K +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPHLSKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 50/66 (75%), Gaps = 2/66 (3%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
LAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIHC
Sbjct: 297 LAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIHC 354
Query: 295 ITQQQP 300
ITQQ P
Sbjct: 355 ITQQIP 360
>gi|384245459|gb|EIE18953.1| hypothetical protein COCSUDRAFT_31523 [Coccomyxa subellipsoidea
C-169]
Length = 455
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 128/228 (56%), Gaps = 14/228 (6%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
++ + +P G+ MP E+EPH CWMGWP + WRD A++ +A VA AIS+FE
Sbjct: 69 VDTSKSPKSQGFTMPGEFEPHEGCWMGWPESDDSKYLWRDGGEPARQAYANVAKAISQFE 128
Query: 61 PVTVCASAAQWE-NARSQLPE--NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKV 117
P+ + A+ + NAR + N+ VIE+ +N W RD GP+ V +V
Sbjct: 129 PLYMAANPGEAAANARKVFADAPNVTVIEVPVNDGWTRDWGPSCVARDVDGKR-----QV 183
Query: 118 AGIDWNFNSWGGVDD------GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVD 171
AG+ W+++ +G +W D + R +L+ LP F + LEGGSIH D
Sbjct: 184 AGVHWDYDCYGAPGKIAQGRPAMMPNWDKDFEAGRTLLTMNGLPVFEAPLHLEGGSIHSD 243
Query: 172 GEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
G+GT + TEECLL+ +RNPHL K I N L YLG+ K+IWL RG+ G
Sbjct: 244 GQGTLVVTEECLLDPSRNPHLDKEGITNVLCEYLGLEKVIWLWRGMEG 291
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 53/74 (71%), Gaps = 4/74 (5%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGD--KKWDGEAVRVLSQAF-PKYEVVGIERARE 284
PRL G R+ A+Y+N Y ANGG++ PQFG + D A+ L +A+ P Y+VVG+ ++RE
Sbjct: 378 PRLPGVRMPATYINHYCANGGVVVPQFGGAAAEMDARAIETLQEAYGPDYKVVGV-KSRE 436
Query: 285 IVLGGGNIHCITQQ 298
++L GNIHCITQQ
Sbjct: 437 VLLNAGNIHCITQQ 450
>gi|419816267|ref|ZP_14340581.1| agmatine deiminase, partial [Streptococcus sp. GMD2S]
gi|404462401|gb|EKA08156.1| agmatine deiminase, partial [Streptococcus sp. GMD2S]
Length = 296
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 119/209 (56%), Gaps = 12/209 (5%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQ 70
GY MPAE+EPH M WP R +W A++ F+++ I++ E V +
Sbjct: 3 GYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKKAFSQIIKTIAEGERVYLLVEQDH 59
Query: 71 WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
A+S L E + +++ N +W RDTGPTI+VN + +DW+FN+WGG
Sbjct: 60 LSEAQSYLGEKVVYLDIPTNDAWARDTGPTILVNDKR--------ERLAVDWSFNAWGGA 111
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE CLL+ RN
Sbjct: 112 VDGLYQDYEEDNQVASRFAEVLEIPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPGRN 171
Query: 190 PHLTKGQIENELKAYLGVMKIIWLPRGLF 218
PHL+K QIEN L LG K+IWLP G++
Sbjct: 172 PHLSKEQIENTLLESLGAEKVIWLPYGIY 200
>gi|260438734|ref|ZP_05792550.1| agmatine deiminase [Butyrivibrio crossotus DSM 2876]
gi|292808860|gb|EFF68065.1| agmatine deiminase [Butyrivibrio crossotus DSM 2876]
Length = 363
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 120/211 (56%), Gaps = 12/211 (5%)
Query: 9 LHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASA 68
+ Y MP E+EPH C M WPVR +W + AQ+ F +VA AI+K E V + A
Sbjct: 6 IKNYRMPGEFEPHDGCIMIWPVRQ---GSWPYNGRDAQKAFMEVAKAIAKSEKVYMLADE 62
Query: 69 AQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWG 128
E ++ L EN+ + + + +W RD GPT VV+ GI+W FN+WG
Sbjct: 63 CHIEEVKNSLKENMEAVIIESDDAWARDVGPTYVVDDKGNR--------MGINWKFNAWG 114
Query: 129 GVDDGCYRDWSLDLQVARKILS-TERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
G DG Y + D +VA + L T + H VLEGGSIH DGEGT LTTE CLL+K
Sbjct: 115 GSFDGLYMHYDKDDKVASRFLKYTGDMIFDAHPFVLEGGSIHSDGEGTILTTEACLLSKG 174
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
RNP +TK +IE+ L LG K++WLP G++
Sbjct: 175 RNPSMTKNEIEDILLKTLGGKKVLWLPCGIY 205
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 217 LFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEV 276
L G + + R AG RLAASYVNFYI+N +I PQFGD D AV +L + FP V
Sbjct: 278 LQGYVFEEGEDVREAGERLAASYVNFYISNKSVIVPQFGDVN-DETAVNILQKEFPGRTV 336
Query: 277 VGIERAREIVLGGGNIHCITQQQP 300
+ +A I+LGGGNIHCITQQ P
Sbjct: 337 CPV-KADVILLGGGNIHCITQQIP 359
>gi|414158489|ref|ZP_11414783.1| agmatine deiminase [Streptococcus sp. F0441]
gi|410871034|gb|EKS18991.1| agmatine deiminase [Streptococcus sp. F0441]
Length = 360
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 121/214 (56%), Gaps = 12/214 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
+P GY MPAE+EPH M WP R +W A+R F+++ I++ E V +
Sbjct: 3 SPKKLGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFSQIIKNIAEGERVYLL 59
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A A+S L + + +++ N +W RDTGPTI+ N + +DW+FN
Sbjct: 60 VDQAHLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILANDTREK--------LAVDWSFN 111
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE CLL
Sbjct: 112 AWGGAVDGLYQDYEDDDQVASRFAEALEMPVYEAKPFVLEGGAIHSDGQGTILVTESCLL 171
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
+ RNPHL+K +IEN L LG K+IWLP G++
Sbjct: 172 SPGRNPHLSKEEIENTLLESLGAEKVIWLPYGIY 205
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP EVVGI AR+I+LGGGNIH
Sbjct: 295 RLAASYVNFYIANKSVLVPQFQDVN-DQVALDILSKCFPDREVVGIP-ARDILLGGGNIH 352
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 353 CITQQIP 359
>gi|441202384|ref|ZP_20971238.1| putative agmatine deiminase [Mycobacterium smegmatis MKD8]
gi|440629946|gb|ELQ91720.1| putative agmatine deiminase [Mycobacterium smegmatis MKD8]
Length = 340
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 160/347 (46%), Gaps = 67/347 (19%)
Query: 9 LHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASA 68
+ Y+MPAE P + WM +P L + D A+ +A VA AI++FEPVT+
Sbjct: 1 MASYVMPAEGAPQDRVWMAFPCEGYSLGDTEADRHEARSTWAAVAHAIAQFEPVTMLVDP 60
Query: 69 AQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWG 128
A+ A+ + +++ +IE +N +W RD GPT V A+ G+ VA +DW FN WG
Sbjct: 61 AEIGAAKRYVSQDVELIEAPLNDAWMRDIGPTFV----HAADGS----VAAVDWTFNGWG 112
Query: 129 GVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNR 188
G D + W D ++ + +P ++V EGG I VDG GT L TE L+ R
Sbjct: 113 GQD---WARWDRDAEIGVTVAELASVPVVSSALVNEGGGIQVDGNGTVLLTETVQLDPGR 169
Query: 189 NPHLTKGQIENEL-------------------------KAYLGVMKIIWLPRGLFGMIHD 223
NP LT+ Q+E EL + ++ ++ I P L
Sbjct: 170 NPGLTREQVERELARTIGGTDFMWLPRGLTRDSERFGTRGHVDIVAAIPTPGRLLLHTQR 229
Query: 224 GEAKPRL-----------------------------AGTRLAASYVNFYIANGGIITPQF 254
E+ P + A + SY+N + NGG+I F
Sbjct: 230 AESHPDVLVCKEIRAVLEADGRFDIVEMPAPDTLTDAEGPVDYSYINHLVVNGGVIACAF 289
Query: 255 GDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
GD + D +A +L++ +P VV ++ AR + GG IHCITQQQPA
Sbjct: 290 GDPR-DADAAAILAEQYPGRVVVSVD-ARPLFARGGGIHCITQQQPA 334
>gi|419493066|ref|ZP_14032793.1| agmatine deiminase [Streptococcus pneumoniae GA47210]
gi|379595104|gb|EHZ59913.1| agmatine deiminase [Streptococcus pneumoniae GA47210]
Length = 361
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 88/170 (51%), Gaps = 20/170 (11%)
Query: 149 LSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIENEL---- 201
L E++ P+ + + + HVD + E +L + +P + + EL
Sbjct: 193 LGAEKVIWLPYGIYQDETNEHVDNVAAFVGPAEVVLAWTDDENDPQYAMSKADLELLEQE 252
Query: 202 -----------KAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGII 250
K + ++ + L G I++ + R AG RLAASYVNFYIAN ++
Sbjct: 253 TDAKGCHFTIHKLPIPAVRQVVTEEDLPGYIYEKGEEERYAGERLAASYVNFYIANKAVL 312
Query: 251 TPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIHCITQQ P
Sbjct: 313 VPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIHCITQQIP 360
>gi|322391914|ref|ZP_08065379.1| agmatine deiminase [Streptococcus peroris ATCC 700780]
gi|321145394|gb|EFX40790.1| agmatine deiminase [Streptococcus peroris ATCC 700780]
Length = 361
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 124/217 (57%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W L A+ F+++ I++ E V
Sbjct: 1 MMDSPKKLGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGLAAKTAFSQIIKTIAQGETV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L + + +++S N +W RDTGPTI++N + K+A +DW
Sbjct: 58 YLLVEEDYLSEAQSYLGDQVVYLDISTNDAWARDTGPTILLND-------KKEKLA-VDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEADDQVASSFAKELNIPVYSAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPH+TK +IE L LG K+IWLP G++
Sbjct: 170 CLLSLGRNPHMTKEEIEETLLESLGAEKVIWLPYGIY 206
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LSQ FP EVVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKSVLVPQFQDVN-DQVALDILSQCFPDREVVGI-LARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|15900801|ref|NP_345405.1| agmatine deiminase [Streptococcus pneumoniae TIGR4]
gi|111658137|ref|ZP_01408835.1| hypothetical protein SpneT_02000703 [Streptococcus pneumoniae
TIGR4]
gi|148992946|ref|ZP_01822565.1| hypothetical protein CGSSp9BS68_07722 [Streptococcus pneumoniae
SP9-BS68]
gi|149010436|ref|ZP_01831807.1| hypothetical protein CGSSp19BS75_03757 [Streptococcus pneumoniae
SP19-BS75]
gi|168485871|ref|ZP_02710379.1| agmatine deiminase [Streptococcus pneumoniae CDC1087-00]
gi|183603364|ref|ZP_02714461.2| agmatine deiminase [Streptococcus pneumoniae SP195]
gi|225854428|ref|YP_002735940.1| agmatine deiminase [Streptococcus pneumoniae JJA]
gi|225858719|ref|YP_002740229.1| agmatine deiminase [Streptococcus pneumoniae 70585]
gi|417678874|ref|ZP_12328271.1| agmatine deiminase [Streptococcus pneumoniae GA17570]
gi|418125529|ref|ZP_12762440.1| agmatine deiminase [Streptococcus pneumoniae GA44511]
gi|418130087|ref|ZP_12766971.1| agmatine deiminase [Streptococcus pneumoniae GA07643]
gi|418146144|ref|ZP_12782926.1| agmatine deiminase [Streptococcus pneumoniae GA13637]
gi|418184738|ref|ZP_12821285.1| agmatine deiminase [Streptococcus pneumoniae GA47283]
gi|418186933|ref|ZP_12823462.1| agmatine deiminase [Streptococcus pneumoniae GA47360]
gi|418189153|ref|ZP_12825668.1| agmatine deiminase [Streptococcus pneumoniae GA47373]
gi|418191466|ref|ZP_12827970.1| agmatine deiminase [Streptococcus pneumoniae GA47388]
gi|418200287|ref|ZP_12836732.1| agmatine deiminase [Streptococcus pneumoniae GA47976]
gi|418214094|ref|ZP_12840829.1| agmatine deiminase [Streptococcus pneumoniae GA54644]
gi|418229667|ref|ZP_12856273.1| agmatine deiminase [Streptococcus pneumoniae EU-NP01]
gi|418234119|ref|ZP_12860698.1| agmatine deiminase [Streptococcus pneumoniae GA08780]
gi|419477586|ref|ZP_14017411.1| agmatine deiminase [Streptococcus pneumoniae GA18068]
gi|419484215|ref|ZP_14023991.1| agmatine deiminase [Streptococcus pneumoniae GA43257]
gi|419507991|ref|ZP_14047644.1| agmatine deiminase [Streptococcus pneumoniae GA49542]
gi|419510543|ref|ZP_14050187.1| agmatine deiminase [Streptococcus pneumoniae NP141]
gi|421206369|ref|ZP_15663430.1| agmatine deiminase [Streptococcus pneumoniae 2090008]
gi|421212992|ref|ZP_15669953.1| agmatine deiminase [Streptococcus pneumoniae 2070108]
gi|421215150|ref|ZP_15672078.1| agmatine deiminase [Streptococcus pneumoniae 2070109]
gi|421220071|ref|ZP_15676921.1| agmatine deiminase [Streptococcus pneumoniae 2070425]
gi|421222398|ref|ZP_15679189.1| agmatine deiminase [Streptococcus pneumoniae 2070531]
gi|421229564|ref|ZP_15686237.1| agmatine deiminase [Streptococcus pneumoniae 2061376]
gi|421236067|ref|ZP_15692668.1| agmatine deiminase [Streptococcus pneumoniae 2071004]
gi|421242872|ref|ZP_15699393.1| agmatine deiminase [Streptococcus pneumoniae 2081074]
gi|421247181|ref|ZP_15703668.1| agmatine deiminase [Streptococcus pneumoniae 2082170]
gi|421278696|ref|ZP_15729504.1| agmatine deiminase [Streptococcus pneumoniae GA17301]
gi|421291794|ref|ZP_15742532.1| agmatine deiminase [Streptococcus pneumoniae GA56348]
gi|421300771|ref|ZP_15751442.1| agmatine deiminase [Streptococcus pneumoniae GA19998]
gi|421311662|ref|ZP_15762269.1| agmatine deiminase [Streptococcus pneumoniae GA58981]
gi|73622177|sp|Q97RA4.1|AGUA_STRPN RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|254802193|sp|C1C6Q3.1|AGUA_STRP7 RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|254802196|sp|C1CDR9.1|AGUA_STRZJ RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|14972395|gb|AAK75045.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4]
gi|147764917|gb|EDK71846.1| hypothetical protein CGSSp19BS75_03757 [Streptococcus pneumoniae
SP19-BS75]
gi|147928398|gb|EDK79414.1| hypothetical protein CGSSp9BS68_07722 [Streptococcus pneumoniae
SP9-BS68]
gi|183570988|gb|EDT91516.1| agmatine deiminase [Streptococcus pneumoniae CDC1087-00]
gi|183571386|gb|EDT91914.1| agmatine deiminase [Streptococcus pneumoniae SP195]
gi|225720774|gb|ACO16628.1| agmatine deiminase [Streptococcus pneumoniae 70585]
gi|225723870|gb|ACO19723.1| agmatine deiminase [Streptococcus pneumoniae JJA]
gi|332073253|gb|EGI83732.1| agmatine deiminase [Streptococcus pneumoniae GA17570]
gi|353797783|gb|EHD78114.1| agmatine deiminase [Streptococcus pneumoniae GA44511]
gi|353803379|gb|EHD83671.1| agmatine deiminase [Streptococcus pneumoniae GA07643]
gi|353814940|gb|EHD95162.1| agmatine deiminase [Streptococcus pneumoniae GA13637]
gi|353851274|gb|EHE31270.1| agmatine deiminase [Streptococcus pneumoniae GA47283]
gi|353852758|gb|EHE32744.1| agmatine deiminase [Streptococcus pneumoniae GA47360]
gi|353856295|gb|EHE36264.1| agmatine deiminase [Streptococcus pneumoniae GA47373]
gi|353857367|gb|EHE37330.1| agmatine deiminase [Streptococcus pneumoniae GA47388]
gi|353865334|gb|EHE45243.1| agmatine deiminase [Streptococcus pneumoniae GA47976]
gi|353871377|gb|EHE51248.1| agmatine deiminase [Streptococcus pneumoniae GA54644]
gi|353888364|gb|EHE68138.1| agmatine deiminase [Streptococcus pneumoniae GA08780]
gi|353889573|gb|EHE69343.1| agmatine deiminase [Streptococcus pneumoniae EU-NP01]
gi|379566968|gb|EHZ31955.1| agmatine deiminase [Streptococcus pneumoniae GA18068]
gi|379583726|gb|EHZ48603.1| agmatine deiminase [Streptococcus pneumoniae GA43257]
gi|379611709|gb|EHZ76431.1| agmatine deiminase [Streptococcus pneumoniae GA49542]
gi|379633736|gb|EHZ98305.1| agmatine deiminase [Streptococcus pneumoniae NP141]
gi|395576283|gb|EJG36839.1| agmatine deiminase [Streptococcus pneumoniae 2090008]
gi|395580579|gb|EJG41060.1| agmatine deiminase [Streptococcus pneumoniae 2070108]
gi|395581283|gb|EJG41755.1| agmatine deiminase [Streptococcus pneumoniae 2070109]
gi|395588348|gb|EJG48678.1| agmatine deiminase [Streptococcus pneumoniae 2070425]
gi|395588566|gb|EJG48894.1| agmatine deiminase [Streptococcus pneumoniae 2070531]
gi|395596376|gb|EJG56594.1| agmatine deiminase [Streptococcus pneumoniae 2061376]
gi|395604986|gb|EJG65118.1| agmatine deiminase [Streptococcus pneumoniae 2071004]
gi|395609571|gb|EJG69657.1| agmatine deiminase [Streptococcus pneumoniae 2081074]
gi|395614817|gb|EJG74835.1| agmatine deiminase [Streptococcus pneumoniae 2082170]
gi|395880129|gb|EJG91182.1| agmatine deiminase [Streptococcus pneumoniae GA17301]
gi|395894011|gb|EJH04992.1| agmatine deiminase [Streptococcus pneumoniae GA56348]
gi|395900195|gb|EJH11134.1| agmatine deiminase [Streptococcus pneumoniae GA19998]
gi|395912240|gb|EJH23103.1| agmatine deiminase [Streptococcus pneumoniae GA58981]
Length = 361
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 88/170 (51%), Gaps = 20/170 (11%)
Query: 149 LSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIENEL---- 201
L E++ P+ + + + HVD + E +L + +P + + EL
Sbjct: 193 LGAEKVIWLPYGIYQDETNEHVDNVAAFVGPAELVLAWTDDENDPQYAMSKADLELLEQE 252
Query: 202 -----------KAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGII 250
K + ++ + L G I++ + R AG RLAASYVNFYIAN ++
Sbjct: 253 TDAKGCHFTIHKLPIPAVRQVVTEEDLPGYIYEEGEEKRYAGERLAASYVNFYIANKAVL 312
Query: 251 TPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIHCITQQ P
Sbjct: 313 VPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIHCITQQIP 360
>gi|418166540|ref|ZP_12803196.1| agmatine deiminase [Streptococcus pneumoniae GA17971]
gi|353830136|gb|EHE10266.1| agmatine deiminase [Streptococcus pneumoniae GA17971]
Length = 361
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 217 LFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEV 276
L G I++ + R AG RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +V
Sbjct: 279 LPGYIYEEGEEKRYAGERLAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKV 337
Query: 277 VGIERAREIVLGGGNIHCITQQQP 300
VGI AR+I+LGGGNIHCITQQ P
Sbjct: 338 VGIP-ARDILLGGGNIHCITQQIP 360
>gi|417686365|ref|ZP_12335643.1| agmatine deiminase [Streptococcus pneumoniae GA41301]
gi|418159597|ref|ZP_12796296.1| agmatine deiminase [Streptococcus pneumoniae GA17227]
gi|419520857|ref|ZP_14060453.1| agmatine deiminase [Streptococcus pneumoniae GA05245]
gi|332076202|gb|EGI86668.1| agmatine deiminase [Streptococcus pneumoniae GA41301]
gi|353821330|gb|EHE01506.1| agmatine deiminase [Streptococcus pneumoniae GA17227]
gi|379539871|gb|EHZ05048.1| agmatine deiminase [Streptococcus pneumoniae GA05245]
Length = 361
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 217 LFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEV 276
L G I++ + R AG RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +V
Sbjct: 279 LPGYIYEEGEEKRYAGERLAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKV 337
Query: 277 VGIERAREIVLGGGNIHCITQQQP 300
VGI AR+I+LGGGNIHCITQQ P
Sbjct: 338 VGIP-ARDILLGGGNIHCITQQIP 360
>gi|168491009|ref|ZP_02715152.1| agmatine deiminase [Streptococcus pneumoniae CDC0288-04]
gi|418193549|ref|ZP_12830041.1| agmatine deiminase [Streptococcus pneumoniae GA47439]
gi|183574583|gb|EDT95111.1| agmatine deiminase [Streptococcus pneumoniae CDC0288-04]
gi|353859529|gb|EHE39479.1| agmatine deiminase [Streptococcus pneumoniae GA47439]
Length = 361
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEVLEKPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 88/170 (51%), Gaps = 20/170 (11%)
Query: 149 LSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIENEL---- 201
L E++ P+ + + + HVD + E +L + +P + + EL
Sbjct: 193 LGAEKVIWLPYGIYQDETNEHVDNVAAFVGPAEVVLAWTDDENDPQYAMSKADLELLEQE 252
Query: 202 -----------KAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGII 250
K + ++ + L G I++ + R AG RLAASYVNFYIAN ++
Sbjct: 253 TDAKGCHFTIHKLPIPAVRQVVTEEDLPGYIYEEGEEKRYAGERLAASYVNFYIANKAVL 312
Query: 251 TPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIHCITQQ P
Sbjct: 313 VPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIHCITQQIP 360
>gi|159484436|ref|XP_001700262.1| agmatine iminohydrolase [Chlamydomonas reinhardtii]
gi|158272429|gb|EDO98229.1| agmatine iminohydrolase [Chlamydomonas reinhardtii]
Length = 421
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 128/225 (56%), Gaps = 14/225 (6%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP GY MP E+EPH CWMGWP WR++A AQ+ +A +A AIS+FEPV +
Sbjct: 50 TPKSLGYTMPGEFEPHVGCWMGWPYSPYL---WRENAKPAQQQYAAIAKAISEFEPVWMF 106
Query: 66 ASAAQWENARSQLP--ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWN 123
A + ++AR+ + V+EM + W RD GPT VV + +G + +VAG+ W+
Sbjct: 107 ADPSSIQSARNHFRGVSGVTVVEMPIEDGWLRDWGPTCVV-RDDPKTGKR--EVAGVHWD 163
Query: 124 FNSWGGVDD------GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCL 177
++ +G +W D R IL L F + LEGGSIH DG+GT +
Sbjct: 164 YDCYGAPGKKKLGLPAMMPEWQKDHAAGRAILDWAGLKAFECPLHLEGGSIHSDGQGTLV 223
Query: 178 TTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIH 222
TEECLL+ +RNPHL K IE LK YLG+ KIIWL +G+ G H
Sbjct: 224 VTEECLLHPSRNPHLGKEGIERMLKEYLGLEKIIWLWKGMMGDDH 268
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 68/118 (57%), Gaps = 21/118 (17%)
Query: 197 IENELKAYLGVMKIIWLPRGLFGM---------IHDGEAK----PRLAGTRLAASYVNFY 243
+EN A +K+I LP GM +H AK PR+AG RLAASY+N Y
Sbjct: 309 LENTEDALGRRIKVIKLPAPTPGMFRSFKEANGMHPDHAKKGYVPRVAGERLAASYINHY 368
Query: 244 IANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
IANGGI K D A+ +LS+A+P +VVG+ +R+++L GN+HCITQQ A
Sbjct: 369 IANGGI-------SKSDELALEILSKAYPGRKVVGV-HSRDVLLNAGNVHCITQQHVA 418
>gi|307708675|ref|ZP_07645138.1| agmatine deiminase [Streptococcus mitis NCTC 12261]
gi|307615249|gb|EFN94459.1| agmatine deiminase [Streptococcus mitis NCTC 12261]
Length = 361
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 125/217 (57%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F+++ I++ E V
Sbjct: 1 MMDSPKKLGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFSQIIKTIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L + + +++ N +W RDTGPTI++N + K+A +DW
Sbjct: 58 YLLVGQDYLAEAQSYLGDKVIYLDIPTNDAWARDTGPTILIND-------EGQKLA-VDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + T +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEDDDQVASRFAETLEMPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHL+K +IE L LG K+IWLP G++
Sbjct: 170 CLLSSGRNPHLSKEEIETTLLECLGAEKVIWLPYGIY 206
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF DK D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANQAVLVPQFQDKN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|148996987|ref|ZP_01824641.1| hypothetical protein CGSSp11BS70_09505 [Streptococcus pneumoniae
SP11-BS70]
gi|168575584|ref|ZP_02721520.1| agmatine deiminase [Streptococcus pneumoniae MLV-016]
gi|169832716|ref|YP_001694374.1| agmatine deiminase [Streptococcus pneumoniae Hungary19A-6]
gi|307067578|ref|YP_003876544.1| peptidylarginine deiminase-like enzyme [Streptococcus pneumoniae
AP200]
gi|418120992|ref|ZP_12757938.1| agmatine deiminase [Streptococcus pneumoniae GA44194]
gi|418148346|ref|ZP_12785111.1| agmatine deiminase [Streptococcus pneumoniae GA13856]
gi|419470876|ref|ZP_14010735.1| agmatine deiminase [Streptococcus pneumoniae GA07914]
gi|419479751|ref|ZP_14019558.1| agmatine deiminase [Streptococcus pneumoniae GA19101]
gi|419490841|ref|ZP_14030581.1| agmatine deiminase [Streptococcus pneumoniae GA47179]
gi|419499442|ref|ZP_14039141.1| agmatine deiminase [Streptococcus pneumoniae GA47597]
gi|419532151|ref|ZP_14071668.1| agmatine deiminase [Streptococcus pneumoniae GA47794]
gi|421227079|ref|ZP_15683788.1| agmatine deiminase [Streptococcus pneumoniae 2072047]
gi|421238552|ref|ZP_15695121.1| agmatine deiminase [Streptococcus pneumoniae 2071247]
gi|421289562|ref|ZP_15740313.1| agmatine deiminase [Streptococcus pneumoniae GA54354]
gi|421304880|ref|ZP_15755536.1| agmatine deiminase [Streptococcus pneumoniae GA62331]
gi|421314088|ref|ZP_15764678.1| agmatine deiminase [Streptococcus pneumoniae GA47562]
gi|254802194|sp|B1IB89.1|AGUA_STRPI RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|147756687|gb|EDK63727.1| hypothetical protein CGSSp11BS70_09505 [Streptococcus pneumoniae
SP11-BS70]
gi|168995218|gb|ACA35830.1| agmatine deiminase [Streptococcus pneumoniae Hungary19A-6]
gi|183578471|gb|EDT98999.1| agmatine deiminase [Streptococcus pneumoniae MLV-016]
gi|306409115|gb|ADM84542.1| Peptidylarginine deiminase-like enzyme [Streptococcus pneumoniae
AP200]
gi|353793819|gb|EHD74178.1| agmatine deiminase [Streptococcus pneumoniae GA44194]
gi|353813021|gb|EHD93254.1| agmatine deiminase [Streptococcus pneumoniae GA13856]
gi|379545592|gb|EHZ10731.1| agmatine deiminase [Streptococcus pneumoniae GA07914]
gi|379570917|gb|EHZ35876.1| agmatine deiminase [Streptococcus pneumoniae GA19101]
gi|379594420|gb|EHZ59230.1| agmatine deiminase [Streptococcus pneumoniae GA47179]
gi|379602496|gb|EHZ67267.1| agmatine deiminase [Streptococcus pneumoniae GA47597]
gi|379606321|gb|EHZ71069.1| agmatine deiminase [Streptococcus pneumoniae GA47794]
gi|395596318|gb|EJG56537.1| agmatine deiminase [Streptococcus pneumoniae 2072047]
gi|395603139|gb|EJG63280.1| agmatine deiminase [Streptococcus pneumoniae 2071247]
gi|395888803|gb|EJG99813.1| agmatine deiminase [Streptococcus pneumoniae GA54354]
gi|395905542|gb|EJH16447.1| agmatine deiminase [Streptococcus pneumoniae GA62331]
gi|395914588|gb|EJH25432.1| agmatine deiminase [Streptococcus pneumoniae GA47562]
gi|429317743|emb|CCP37543.1| Porphyromonas-type peptidyl-arginine deiminase [Streptococcus
pneumoniae SPN034156]
Length = 361
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKDAKRAFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|111219662|ref|YP_710456.1| peptidyl-arginine deiminase [Frankia alni ACN14a]
gi|111147194|emb|CAJ58843.1| Peptidyl-arginine deiminase [Frankia alni ACN14a]
Length = 351
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 161/356 (45%), Gaps = 73/356 (20%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQR-VFAKVATAISKFEPVTVC 65
PA MPAEWEPH++ WM +P + L A R +A+VAT IS+ EPVT+
Sbjct: 7 PAPAARRMPAEWEPHARTWMAFPPPNDTFGAQGSPGLAAARSAWARVATTISRHEPVTLI 66
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A Q A +P + VIE++++ +W RD+GPT ++ + +DW FN
Sbjct: 67 AGPDQGATAARLVPPAVTVIELALDDAWMRDSGPTFTIDGDG--------HLGAVDWVFN 118
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
WG D + W D +A + + ++ EGG I VDG GT L TE L+
Sbjct: 119 GWGAQD---WARWDADRLLATAVAARAGAVARHSALTNEGGGIAVDGAGTVLLTETVQLD 175
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGL------FGM------------------- 220
+RNP + ++E EL A LG + IWLPRGL FG
Sbjct: 176 PHRNPGWDRARVEAELHAQLGTTRAIWLPRGLARDYDRFGTRGHVDVVAAFVRPGLVAVH 235
Query: 221 ----------------------IHDGEAKP------------RLAGTRLAASYVNFYIAN 246
HD +P + G SY+N+Y+AN
Sbjct: 236 SQPDPAHPDHATTRELAALLRASHDAAGRPLEVVEIAAPTVLEVDGGPAGYSYLNYYVAN 295
Query: 247 GGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
G ++ F D + D +A+ +L++ +P V ++ AR I GG IHCITQQQP +
Sbjct: 296 GLVVAGVFDDPR-DADALDLLARLYPTRRVEPVD-ARVIFGHGGGIHCITQQQPQV 349
>gi|421233906|ref|ZP_15690528.1| agmatine deiminase [Streptococcus pneumoniae 2061617]
gi|421249215|ref|ZP_15705677.1| agmatine deiminase [Streptococcus pneumoniae 2082239]
gi|395602803|gb|EJG62945.1| agmatine deiminase [Streptococcus pneumoniae 2061617]
gi|395614516|gb|EJG74535.1| agmatine deiminase [Streptococcus pneumoniae 2082239]
Length = 361
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKDAKRAFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAVLVPQFEDVN-DQVAIDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|291527853|emb|CBK93439.1| agmatine deiminase [Eubacterium rectale M104/1]
Length = 376
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 125/226 (55%), Gaps = 23/226 (10%)
Query: 5 GTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTV 64
G P G+ MPAE+ PH + WP +R +W A A+ FA+V AI++ E V
Sbjct: 7 GCPRADGFYMPAEYAPHKGTIIIWP---KRPGSWIYGARRAREAFAEVICAIAESEQAYV 63
Query: 65 CASAAQWENARS---------QLPEN--IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQ 113
A A +NARS EN ++ I+M + +W RD GPT V N+ A
Sbjct: 64 LAEADVIDNARSVVEAVRKQKNYQENFPVKYIQMGSDDAWARDVGPTFVKNEDGA----- 118
Query: 114 APKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDG 172
V GIDW FN+WGG DG Y DW+ D +VA + + H VLEGG+IH DG
Sbjct: 119 ---VRGIDWCFNAWGGKVDGLYADWTKDDRVAALFCNKAGYDMYDAHPFVLEGGAIHTDG 175
Query: 173 EGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
E T + TE CLL+K RNP L+K +IE +LK YLG KIIW+P G++
Sbjct: 176 EKTVIVTESCLLSKGRNPELSKSEIEQKLKDYLGAEKIIWIPYGIY 221
>gi|291524109|emb|CBK89696.1| agmatine deiminase [Eubacterium rectale DSM 17629]
Length = 376
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 126/226 (55%), Gaps = 23/226 (10%)
Query: 5 GTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTV 64
G P G+ MPAE+ PH+ + WP +R +W A A+ FA+V AI++ E V
Sbjct: 7 GCPRADGFYMPAEYAPHNGTIIIWP---KRPGSWIYGARRAREAFAEVICAIAESEQAYV 63
Query: 65 CASAAQWENARS---------QLPEN--IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQ 113
A A +NARS EN ++ I+M + +W RD GPT V N+ A
Sbjct: 64 LAEADVIDNARSVVEAVRKQKNYQENFPVKYIQMESDDAWARDVGPTFVKNEDGA----- 118
Query: 114 APKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDG 172
V GIDW FN+WGG DG Y DW+ D +VA + + H VLEGG+IH DG
Sbjct: 119 ---VRGIDWCFNAWGGKVDGLYADWTKDDRVAALFCNKAGYDMYDAHPFVLEGGAIHTDG 175
Query: 173 EGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
E T + TE CLL+K RNP L+K +IE +LK YLG KIIW+P G++
Sbjct: 176 EKTVIVTESCLLSKGRNPELSKSEIEQKLKDYLGAEKIIWIPYGIY 221
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 217 LFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEV 276
L G + R AG RLAASYVNFYI NGG++ PQFGD D A++ + F +V
Sbjct: 294 LSGFTFEEGEDEREAGERLAASYVNFYITNGGVLIPQFGD-VMDEPALKAIGSLFEGRKV 352
Query: 277 VGIERAREIVLGGGNIHCITQQQP 300
I AR+I++GGGNIHCITQQ P
Sbjct: 353 YPI-YARDIIVGGGNIHCITQQIP 375
>gi|421240480|ref|ZP_15697027.1| agmatine deiminase [Streptococcus pneumoniae 2080913]
gi|395609062|gb|EJG69152.1| agmatine deiminase [Streptococcus pneumoniae 2080913]
Length = 361
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAVLVPQFEDVN-DQVAIDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|405761050|ref|YP_006701646.1| Porphyromonas-type peptidyl-arginine deiminase [Streptococcus
pneumoniae SPNA45]
gi|404277939|emb|CCM08508.1| Porphyromonas-type peptidyl-arginine deiminase [Streptococcus
pneumoniae SPNA45]
Length = 361
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|148988356|ref|ZP_01819803.1| hypothetical protein CGSSp6BS73_06000 [Streptococcus pneumoniae
SP6-BS73]
gi|147926037|gb|EDK77111.1| hypothetical protein CGSSp6BS73_06000 [Streptococcus pneumoniae
SP6-BS73]
Length = 360
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 120/214 (56%), Gaps = 12/214 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
+P GY MPAE+EPH M WP R +W A+RVF ++ I++ E V +
Sbjct: 3 SPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRVFTQIIETIAEGERVYLL 59
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A A+S L + + +++ N +W RDTGPTI+VN K +DW FN
Sbjct: 60 VEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDWAFN 111
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE CLL
Sbjct: 112 AWGGTYDGLYQDYEEDDQVASRFAEALGKPVYDAKPFVLEGGAIHSDGQGTILVTESCLL 171
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 172 SPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 205
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 88/170 (51%), Gaps = 20/170 (11%)
Query: 149 LSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIENEL---- 201
L E++ P+ + + + HVD + E +L + +P + + EL
Sbjct: 192 LGAEKVIWLPYGIYQDETNEHVDNVAAFVGPAELVLAWTDDENDPQYAMSKADLELLEQE 251
Query: 202 -----------KAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGII 250
K + ++ + L G I++ + R AG RLAASYVNFYIAN ++
Sbjct: 252 TDAKGCHFTIHKLPIPAVRQVVTEEDLPGYIYEEGEEKRYAGERLAASYVNFYIANKAVL 311
Query: 251 TPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIHCITQQ P
Sbjct: 312 VPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIHCITQQIP 359
>gi|238925684|ref|YP_002939201.1| hypothetical protein EUBREC_3341 [Eubacterium rectale ATCC 33656]
gi|238877360|gb|ACR77067.1| hypothetical protein EUBREC_3341 [Eubacterium rectale ATCC 33656]
Length = 376
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 125/226 (55%), Gaps = 23/226 (10%)
Query: 5 GTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTV 64
G P G+ MPAE+ PH + WP +R +W A A+ FA+V AI++ E V
Sbjct: 7 GCPRADGFYMPAEYAPHKGTIIIWP---KRPGSWIYGARRAREAFAEVICAIAESEQAYV 63
Query: 65 CASAAQWENARS---------QLPEN--IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQ 113
A A +NARS EN ++ I+M + +W RD GPT V N+ A
Sbjct: 64 LAEADVIDNARSVVEAVRKQKNYQENFPVKYIQMESDDAWARDVGPTFVKNEDGA----- 118
Query: 114 APKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDG 172
V GIDW FN+WGG DG Y DW+ D +VA + + H VLEGG+IH DG
Sbjct: 119 ---VRGIDWCFNAWGGKVDGLYADWTKDDRVAALFCNKAGYDMYDAHPFVLEGGAIHTDG 175
Query: 173 EGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
E T + TE CLL+K RNP L+K +IE +LK YLG KIIW+P G++
Sbjct: 176 EKTVIVTESCLLSKGRNPELSKSEIEQKLKDYLGAEKIIWIPYGIY 221
>gi|419442408|ref|ZP_13982439.1| agmatine deiminase [Streptococcus pneumoniae GA13224]
gi|379554375|gb|EHZ19455.1| agmatine deiminase [Streptococcus pneumoniae GA13224]
Length = 361
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|149019508|ref|ZP_01834827.1| hypothetical protein CGSSp23BS72_02878 [Streptococcus pneumoniae
SP23-BS72]
gi|418102642|ref|ZP_12739718.1| agmatine deiminase [Streptococcus pneumoniae NP070]
gi|419475315|ref|ZP_14015156.1| agmatine deiminase [Streptococcus pneumoniae GA14688]
gi|419486471|ref|ZP_14026237.1| agmatine deiminase [Streptococcus pneumoniae GA44128]
gi|421208743|ref|ZP_15665765.1| agmatine deiminase [Streptococcus pneumoniae 2070005]
gi|421224788|ref|ZP_15681532.1| agmatine deiminase [Streptococcus pneumoniae 2070768]
gi|147930883|gb|EDK81863.1| hypothetical protein CGSSp23BS72_02878 [Streptococcus pneumoniae
SP23-BS72]
gi|353776808|gb|EHD57283.1| agmatine deiminase [Streptococcus pneumoniae NP070]
gi|379561653|gb|EHZ26670.1| agmatine deiminase [Streptococcus pneumoniae GA14688]
gi|379588086|gb|EHZ52932.1| agmatine deiminase [Streptococcus pneumoniae GA44128]
gi|395575699|gb|EJG36264.1| agmatine deiminase [Streptococcus pneumoniae 2070005]
gi|395590576|gb|EJG50880.1| agmatine deiminase [Streptococcus pneumoniae 2070768]
Length = 361
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAVLVPQFEDVN-DQVAIDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|148984663|ref|ZP_01817931.1| hypothetical protein CGSSp3BS71_01427 [Streptococcus pneumoniae
SP3-BS71]
gi|149002466|ref|ZP_01827400.1| hypothetical protein CGSSp14BS69_12096 [Streptococcus pneumoniae
SP14-BS69]
gi|237651126|ref|ZP_04525378.1| agmatine deiminase [Streptococcus pneumoniae CCRI 1974]
gi|307127525|ref|YP_003879556.1| agmatine deiminase [Streptococcus pneumoniae 670-6B]
gi|387757317|ref|YP_006064296.1| Porphyromonas-type peptidyl-arginine deiminase [Streptococcus
pneumoniae OXC141]
gi|417676674|ref|ZP_12326085.1| agmatine deiminase [Streptococcus pneumoniae GA17545]
gi|417698336|ref|ZP_12347509.1| agmatine deiminase [Streptococcus pneumoniae GA41317]
gi|418076025|ref|ZP_12713264.1| agmatine deiminase [Streptococcus pneumoniae GA47502]
gi|418154955|ref|ZP_12791686.1| agmatine deiminase [Streptococcus pneumoniae GA16242]
gi|418225345|ref|ZP_12851974.1| agmatine deiminase [Streptococcus pneumoniae NP112]
gi|418231987|ref|ZP_12858575.1| agmatine deiminase [Streptococcus pneumoniae GA07228]
gi|418236429|ref|ZP_12862997.1| agmatine deiminase [Streptococcus pneumoniae GA19690]
gi|419453212|ref|ZP_13993185.1| agmatine deiminase [Streptococcus pneumoniae EU-NP03]
gi|419457300|ref|ZP_13997245.1| agmatine deiminase [Streptococcus pneumoniae GA02254]
gi|419505856|ref|ZP_14045517.1| agmatine deiminase [Streptococcus pneumoniae GA49194]
gi|419516596|ref|ZP_14056214.1| agmatine deiminase [Streptococcus pneumoniae GA02506]
gi|421211023|ref|ZP_15668007.1| agmatine deiminase [Streptococcus pneumoniae 2070035]
gi|421298389|ref|ZP_15749077.1| agmatine deiminase [Streptococcus pneumoniae GA60080]
gi|147759403|gb|EDK66395.1| hypothetical protein CGSSp14BS69_12096 [Streptococcus pneumoniae
SP14-BS69]
gi|147923054|gb|EDK74169.1| hypothetical protein CGSSp3BS71_01427 [Streptococcus pneumoniae
SP3-BS71]
gi|301799906|emb|CBW32485.1| Porphyromonas-type peptidyl-arginine deiminase [Streptococcus
pneumoniae OXC141]
gi|306484587|gb|ADM91456.1| agmatine deiminase [Streptococcus pneumoniae 670-6B]
gi|332075534|gb|EGI86002.1| agmatine deiminase [Streptococcus pneumoniae GA17545]
gi|332202777|gb|EGJ16846.1| agmatine deiminase [Streptococcus pneumoniae GA41317]
gi|353749814|gb|EHD30457.1| agmatine deiminase [Streptococcus pneumoniae GA47502]
gi|353823247|gb|EHE03422.1| agmatine deiminase [Streptococcus pneumoniae GA16242]
gi|353882653|gb|EHE62464.1| agmatine deiminase [Streptococcus pneumoniae NP112]
gi|353888293|gb|EHE68069.1| agmatine deiminase [Streptococcus pneumoniae GA07228]
gi|353892661|gb|EHE72409.1| agmatine deiminase [Streptococcus pneumoniae GA19690]
gi|379532298|gb|EHY97527.1| agmatine deiminase [Streptococcus pneumoniae GA02254]
gi|379607770|gb|EHZ72516.1| agmatine deiminase [Streptococcus pneumoniae GA49194]
gi|379626921|gb|EHZ91537.1| agmatine deiminase [Streptococcus pneumoniae EU-NP03]
gi|379640599|gb|EIA05138.1| agmatine deiminase [Streptococcus pneumoniae GA02506]
gi|395573746|gb|EJG34333.1| agmatine deiminase [Streptococcus pneumoniae 2070035]
gi|395902345|gb|EJH13278.1| agmatine deiminase [Streptococcus pneumoniae GA60080]
gi|429319286|emb|CCP32536.1| Porphyromonas-type peptidyl-arginine deiminase [Streptococcus
pneumoniae SPN034183]
gi|429321101|emb|CCP34510.1| Porphyromonas-type peptidyl-arginine deiminase [Streptococcus
pneumoniae SPN994039]
gi|429322921|emb|CCP30551.1| Porphyromonas-type peptidyl-arginine deiminase [Streptococcus
pneumoniae SPN994038]
Length = 361
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|419466366|ref|ZP_14006249.1| agmatine deiminase [Streptococcus pneumoniae GA05248]
gi|419512318|ref|ZP_14051952.1| agmatine deiminase [Streptococcus pneumoniae GA05578]
gi|421283111|ref|ZP_15733898.1| agmatine deiminase [Streptococcus pneumoniae GA04216]
gi|379544489|gb|EHZ09633.1| agmatine deiminase [Streptococcus pneumoniae GA05248]
gi|379636788|gb|EIA01346.1| agmatine deiminase [Streptococcus pneumoniae GA05578]
gi|395881074|gb|EJG92123.1| agmatine deiminase [Streptococcus pneumoniae GA04216]
Length = 361
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D + +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAVLVPQFEDVN-DQVVLDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|342163942|ref|YP_004768581.1| agmatine deiminase [Streptococcus pseudopneumoniae IS7493]
gi|341933824|gb|AEL10721.1| agmatine deiminase [Streptococcus pseudopneumoniae IS7493]
Length = 361
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF DK D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAVLVPQFQDKN-DQVALDILSECFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|168494350|ref|ZP_02718493.1| agmatine deiminase [Streptococcus pneumoniae CDC3059-06]
gi|182683868|ref|YP_001835615.1| agmatine deiminase [Streptococcus pneumoniae CGSP14]
gi|221231694|ref|YP_002510846.1| Porphyromonas-type peptidyl-arginine deiminase [Streptococcus
pneumoniae ATCC 700669]
gi|303254984|ref|ZP_07341063.1| agmatine deiminase [Streptococcus pneumoniae BS455]
gi|303259833|ref|ZP_07345808.1| agmatine deiminase [Streptococcus pneumoniae SP-BS293]
gi|303262247|ref|ZP_07348191.1| agmatine deiminase [Streptococcus pneumoniae SP14-BS292]
gi|303264669|ref|ZP_07350587.1| agmatine deiminase [Streptococcus pneumoniae BS397]
gi|303267170|ref|ZP_07353037.1| agmatine deiminase [Streptococcus pneumoniae BS457]
gi|303269418|ref|ZP_07355187.1| agmatine deiminase [Streptococcus pneumoniae BS458]
gi|387626283|ref|YP_006062456.1| Porphyromonas-type peptidyl-arginine deiminase [Streptococcus
pneumoniae INV104]
gi|387759179|ref|YP_006066157.1| Porphyromonas-type peptidyl-arginine deiminase [Streptococcus
pneumoniae INV200]
gi|415698125|ref|ZP_11457036.1| agmatine deiminase [Streptococcus pneumoniae 459-5]
gi|415749321|ref|ZP_11477265.1| agmatine deiminase [Streptococcus pneumoniae SV35]
gi|415752006|ref|ZP_11479117.1| agmatine deiminase [Streptococcus pneumoniae SV36]
gi|418073703|ref|ZP_12710961.1| agmatine deiminase [Streptococcus pneumoniae GA11184]
gi|418078411|ref|ZP_12715634.1| agmatine deiminase [Streptococcus pneumoniae 4027-06]
gi|418080376|ref|ZP_12717588.1| agmatine deiminase [Streptococcus pneumoniae 6735-05]
gi|418086658|ref|ZP_12723828.1| agmatine deiminase [Streptococcus pneumoniae GA47033]
gi|418089314|ref|ZP_12726471.1| agmatine deiminase [Streptococcus pneumoniae GA43265]
gi|418098291|ref|ZP_12735390.1| agmatine deiminase [Streptococcus pneumoniae 6901-05]
gi|418104978|ref|ZP_12742038.1| agmatine deiminase [Streptococcus pneumoniae GA44500]
gi|418114417|ref|ZP_12751407.1| agmatine deiminase [Streptococcus pneumoniae 5787-06]
gi|418116656|ref|ZP_12753628.1| agmatine deiminase [Streptococcus pneumoniae 6963-05]
gi|418123191|ref|ZP_12760125.1| agmatine deiminase [Streptococcus pneumoniae GA44378]
gi|418127778|ref|ZP_12764674.1| agmatine deiminase [Streptococcus pneumoniae NP170]
gi|418134981|ref|ZP_12771838.1| agmatine deiminase [Streptococcus pneumoniae GA11426]
gi|418177951|ref|ZP_12814535.1| agmatine deiminase [Streptococcus pneumoniae GA41565]
gi|418180377|ref|ZP_12816948.1| agmatine deiminase [Streptococcus pneumoniae GA41688]
gi|418202199|ref|ZP_12838629.1| agmatine deiminase [Streptococcus pneumoniae GA52306]
gi|418216369|ref|ZP_12843093.1| agmatine deiminase [Streptococcus pneumoniae Netherlands15B-37]
gi|419431316|ref|ZP_13971462.1| agmatine deiminase [Streptococcus pneumoniae EU-NP05]
gi|419433618|ref|ZP_13973736.1| agmatine deiminase [Streptococcus pneumoniae GA40183]
gi|419440139|ref|ZP_13980191.1| agmatine deiminase [Streptococcus pneumoniae GA40410]
gi|419455324|ref|ZP_13995284.1| agmatine deiminase [Streptococcus pneumoniae EU-NP04]
gi|419464369|ref|ZP_14004262.1| agmatine deiminase [Streptococcus pneumoniae GA04175]
gi|419468788|ref|ZP_14008659.1| agmatine deiminase [Streptococcus pneumoniae GA06083]
gi|419472981|ref|ZP_14012832.1| agmatine deiminase [Streptococcus pneumoniae GA13430]
gi|419481945|ref|ZP_14021738.1| agmatine deiminase [Streptococcus pneumoniae GA40563]
gi|419497102|ref|ZP_14036813.1| agmatine deiminase [Streptococcus pneumoniae GA47522]
gi|419514479|ref|ZP_14054106.1| agmatine deiminase [Streptococcus pneumoniae England14-9]
gi|419534381|ref|ZP_14073884.1| agmatine deiminase [Streptococcus pneumoniae GA17457]
gi|421285156|ref|ZP_15735933.1| agmatine deiminase [Streptococcus pneumoniae GA60190]
gi|421296085|ref|ZP_15746797.1| agmatine deiminase [Streptococcus pneumoniae GA58581]
gi|421307191|ref|ZP_15757836.1| agmatine deiminase [Streptococcus pneumoniae GA60132]
gi|444382215|ref|ZP_21180419.1| agmatine deiminase [Streptococcus pneumoniae PCS8106]
gi|444384757|ref|ZP_21182848.1| agmatine deiminase [Streptococcus pneumoniae PCS8203]
gi|254802195|sp|B8ZP26.1|AGUA_STRPJ RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|259710050|sp|B2IP79.1|AGUA_STRPS RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|182629202|gb|ACB90150.1| hypothetical protein SPCG_0898 [Streptococcus pneumoniae CGSP14]
gi|183575718|gb|EDT96246.1| agmatine deiminase [Streptococcus pneumoniae CDC3059-06]
gi|220674154|emb|CAR68677.1| Porphyromonas-type peptidyl-arginine deiminase [Streptococcus
pneumoniae ATCC 700669]
gi|301794066|emb|CBW36470.1| Porphyromonas-type peptidyl-arginine deiminase [Streptococcus
pneumoniae INV104]
gi|301801768|emb|CBW34479.1| Porphyromonas-type peptidyl-arginine deiminase [Streptococcus
pneumoniae INV200]
gi|302598064|gb|EFL65131.1| agmatine deiminase [Streptococcus pneumoniae BS455]
gi|302636570|gb|EFL67061.1| agmatine deiminase [Streptococcus pneumoniae SP14-BS292]
gi|302639038|gb|EFL69498.1| agmatine deiminase [Streptococcus pneumoniae SP-BS293]
gi|302641037|gb|EFL71415.1| agmatine deiminase [Streptococcus pneumoniae BS458]
gi|302643285|gb|EFL73565.1| agmatine deiminase [Streptococcus pneumoniae BS457]
gi|302645756|gb|EFL75985.1| agmatine deiminase [Streptococcus pneumoniae BS397]
gi|353747602|gb|EHD28258.1| agmatine deiminase [Streptococcus pneumoniae 4027-06]
gi|353750550|gb|EHD31188.1| agmatine deiminase [Streptococcus pneumoniae GA11184]
gi|353752916|gb|EHD33540.1| agmatine deiminase [Streptococcus pneumoniae 6735-05]
gi|353758919|gb|EHD39505.1| agmatine deiminase [Streptococcus pneumoniae GA47033]
gi|353762000|gb|EHD42563.1| agmatine deiminase [Streptococcus pneumoniae GA43265]
gi|353769651|gb|EHD50167.1| agmatine deiminase [Streptococcus pneumoniae 6901-05]
gi|353779412|gb|EHD59878.1| agmatine deiminase [Streptococcus pneumoniae GA44500]
gi|353787159|gb|EHD67566.1| agmatine deiminase [Streptococcus pneumoniae 5787-06]
gi|353789878|gb|EHD70267.1| agmatine deiminase [Streptococcus pneumoniae 6963-05]
gi|353797278|gb|EHD77613.1| agmatine deiminase [Streptococcus pneumoniae GA44378]
gi|353800239|gb|EHD80553.1| agmatine deiminase [Streptococcus pneumoniae NP170]
gi|353844725|gb|EHE24768.1| agmatine deiminase [Streptococcus pneumoniae GA41565]
gi|353845989|gb|EHE26027.1| agmatine deiminase [Streptococcus pneumoniae GA41688]
gi|353868002|gb|EHE47892.1| agmatine deiminase [Streptococcus pneumoniae GA52306]
gi|353873420|gb|EHE53281.1| agmatine deiminase [Streptococcus pneumoniae Netherlands15B-37]
gi|353902218|gb|EHE77748.1| agmatine deiminase [Streptococcus pneumoniae GA11426]
gi|379539588|gb|EHZ04767.1| agmatine deiminase [Streptococcus pneumoniae GA04175]
gi|379546891|gb|EHZ12029.1| agmatine deiminase [Streptococcus pneumoniae GA06083]
gi|379552488|gb|EHZ17577.1| agmatine deiminase [Streptococcus pneumoniae GA13430]
gi|379565115|gb|EHZ30108.1| agmatine deiminase [Streptococcus pneumoniae GA17457]
gi|379576619|gb|EHZ41543.1| agmatine deiminase [Streptococcus pneumoniae GA40183]
gi|379579906|gb|EHZ44802.1| agmatine deiminase [Streptococcus pneumoniae GA40410]
gi|379580819|gb|EHZ45708.1| agmatine deiminase [Streptococcus pneumoniae GA40563]
gi|379601616|gb|EHZ66389.1| agmatine deiminase [Streptococcus pneumoniae GA47522]
gi|379629781|gb|EHZ94375.1| agmatine deiminase [Streptococcus pneumoniae EU-NP04]
gi|379632560|gb|EHZ97136.1| agmatine deiminase [Streptococcus pneumoniae EU-NP05]
gi|379637575|gb|EIA02128.1| agmatine deiminase [Streptococcus pneumoniae England14-9]
gi|381309702|gb|EIC50535.1| agmatine deiminase [Streptococcus pneumoniae SV36]
gi|381317130|gb|EIC57860.1| agmatine deiminase [Streptococcus pneumoniae 459-5]
gi|381317615|gb|EIC58340.1| agmatine deiminase [Streptococcus pneumoniae SV35]
gi|395887135|gb|EJG98150.1| agmatine deiminase [Streptococcus pneumoniae GA60190]
gi|395897298|gb|EJH08262.1| agmatine deiminase [Streptococcus pneumoniae GA58581]
gi|395908292|gb|EJH19174.1| agmatine deiminase [Streptococcus pneumoniae GA60132]
gi|444251517|gb|ELU57986.1| agmatine deiminase [Streptococcus pneumoniae PCS8203]
gi|444253175|gb|ELU59634.1| agmatine deiminase [Streptococcus pneumoniae PCS8106]
Length = 361
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|417793429|ref|ZP_12440707.1| agmatine deiminase [Streptococcus oralis SK255]
gi|334273157|gb|EGL91508.1| agmatine deiminase [Streptococcus oralis SK255]
Length = 361
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M TP GY MPAE+EPH M WP R +W A++ F ++ I++ E V
Sbjct: 1 MIETPKKAGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKKAFTQIIKTIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L + + +++ N +W RDTGPTI+VN +DW
Sbjct: 58 YLLVEQDYLSEAKSYLGDKVVYLDIPTNDAWARDTGPTILVNDKREK--------LAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGTVDGLYQDYEDDNQVASRFAEALEMPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHL+K +IEN + LG K+IWLP G++
Sbjct: 170 CLLSAGRNPHLSKEEIENNILESLGAEKVIWLPYGIY 206
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|226365065|ref|YP_002782848.1| hypothetical protein ROP_56560 [Rhodococcus opacus B4]
gi|226243555|dbj|BAH53903.1| hypothetical protein [Rhodococcus opacus B4]
Length = 343
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/347 (32%), Positives = 161/347 (46%), Gaps = 72/347 (20%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAE E H + WM +P L + ++ A+ +A+VA A+++FEPVTV Q
Sbjct: 5 MPAEGELHERTWMAYPSEGYSLGDTPEEHHEARTTWAEVAHAVARFEPVTVVVDPGQVAA 64
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
A+ L +I ++E +N +W RD GPT V+++ ++ G+DW FN WGG D
Sbjct: 65 AKKYLSADIGIVEAPLNDAWMRDIGPTFVLSEDG--------RLGGVDWIFNGWGGQD-- 114
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ W D ++ ++ +V EGG I VDG GT L TE L+ RNP+L+
Sbjct: 115 -WAQWDKDSKIGALVVERSGAELVDSPIVNEGGGIQVDGLGTVLVTETVQLDPGRNPNLS 173
Query: 194 KGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIHD------- 223
K IE EL +G K+IWLPRGL +G ++HD
Sbjct: 174 KADIEAELARTIGATKVIWLPRGLTRDSDTYGTRGHVDIVAAIPSPGVVLVHDQRNPEHP 233
Query: 224 -------------------GEA-----KPRLAGTRLAASYVNFYIAN-----GGIITPQF 254
GE+ P R +V++ N GG+I F
Sbjct: 234 DFEVSKAVIDVLKQTTDARGESWEIITVPAPQILRDEEGFVDYSYINHFVVNGGVIACSF 293
Query: 255 GDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
D D EAV +LS A+P VV ++ AR + GG IHCITQ QPA
Sbjct: 294 DDPA-DEEAVAILSAAYPGRTVVPVD-ARPLFARGGGIHCITQHQPA 338
>gi|291520293|emb|CBK75514.1| agmatine deiminase [Butyrivibrio fibrisolvens 16/4]
Length = 370
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 120/219 (54%), Gaps = 15/219 (6%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M TP + MPAE+ H C M WPVR +W A+ VF+++A I++ E V
Sbjct: 1 MITTPKADNFYMPAEYSKHRGCVMVWPVR---PGSWPHKGAQAKSVFSQIAMTIAESEEV 57
Query: 63 TVCASAAQWENARSQLP--ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
+ A + +NI ++++ + +W RD GPT VVN+ +V GI
Sbjct: 58 WMLADEEHIQEVEETFSKNDNIHPLKIATDDAWARDIGPTCVVNEG---------QVRGI 108
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTT 179
DW FN+WGG DG Y W D A KI + + H VLEGGSIH DGEGT + T
Sbjct: 109 DWQFNAWGGDYDGLYAHWEKDDAAASKICQALNIDVYDAHPFVLEGGSIHSDGEGTIIVT 168
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
E CLL+K RNP L+K QIE +L YLG KIIWLP G++
Sbjct: 169 EACLLSKGRNPDLSKEQIEEKLCEYLGAQKIIWLPSGIY 207
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Query: 217 LFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEV 276
L G + + R G RLAASYVNFYI+NGGII PQFGD+ D AV +L + FP ++
Sbjct: 280 LQGYVFEEGEDVRQVGERLAASYVNFYISNGGIILPQFGDEN-DKVAVDILGKLFPDRKI 338
Query: 277 VGIERAREIVLGGGNIHCITQQQP 300
I AR I++GGGNIHCITQQ P
Sbjct: 339 FPI-YARAIIVGGGNIHCITQQIP 361
>gi|417693841|ref|ZP_12343030.1| agmatine deiminase [Streptococcus pneumoniae GA47901]
gi|332204924|gb|EGJ18989.1| agmatine deiminase [Streptococcus pneumoniae GA47901]
Length = 361
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRSFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEALEKPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 88/170 (51%), Gaps = 20/170 (11%)
Query: 149 LSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIENEL---- 201
L E++ P+ + + + HVD + E +L + +P + + EL
Sbjct: 193 LGAEKVIWLPYGIYQDETNEHVDNVAAFVGPAEVVLAWTDDENDPQYAMSKADLELLEQE 252
Query: 202 -----------KAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGII 250
K + ++ + L G I++ + R AG RLAASYVNFYIAN ++
Sbjct: 253 TDAKGCHFTIHKLPIPAVRQVVTEEDLLGYIYEEGEEKRYAGERLAASYVNFYIANKAVL 312
Query: 251 TPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIHCITQQ P
Sbjct: 313 VPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIHCITQQIP 360
>gi|87312018|ref|ZP_01094126.1| hypothetical protein DSM3645_13113 [Blastopirellula marina DSM
3645]
gi|87285257|gb|EAQ77183.1| hypothetical protein DSM3645_13113 [Blastopirellula marina DSM
3645]
Length = 344
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 165/355 (46%), Gaps = 74/355 (20%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
++ G P GY PAEWEPH + W E +W D V+ ++ +S+FEP
Sbjct: 3 KLAGKPRELGYRWPAEWEPHVGTLLSWAHNRE---SWPDKFEPIPFVYQRLVETLSQFEP 59
Query: 62 VTVCASA---AQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVA 118
V + A+ A+ LP N+ + ++ N +W RD GP + S+ P+ A
Sbjct: 60 VHIQAAGDALAEATQMVGHLP-NVTLHPIATNDAWARDHGPIFL-----QSTNDDQPR-A 112
Query: 119 GIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLT 178
+DW +N+WGG Y W D A+++L+ +P F ++LEGG++ +G G LT
Sbjct: 113 ALDWRYNAWGGK----YPPWDADDASAQQLLADLDVPYFEPGIILEGGAVEGNGAGVILT 168
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG---EAKPRLAGTRL 235
TEECLLN NRNP L++ +E L+ YL K++WL RG+ G DG E +A R+
Sbjct: 169 TEECLLNPNRNPTLSRDDMERYLRDYLCAEKVLWLGRGIVGDDTDGHIDELARFVAPNRI 228
Query: 236 AAS----------------------------------------------------YVNFY 243
A+ Y NFY
Sbjct: 229 VAAYEPNTGDENHEPLAENFARLQAMTDPHGKPFEVIKLPMPQPKLVGEQRIPACYCNFY 288
Query: 244 IANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQ 298
IANG +I PQF D D AV VL + FP ++V + A ++V G G HCITQQ
Sbjct: 289 IANGVVIVPQFDDPA-DAAAVEVLRRCFPDRQIVPLP-ALDLVWGLGAYHCITQQ 341
>gi|322376665|ref|ZP_08051158.1| agmatine deiminase [Streptococcus sp. M334]
gi|321282472|gb|EFX59479.1| agmatine deiminase [Streptococcus sp. M334]
Length = 361
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 125/217 (57%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A++ F+++ I++ E V
Sbjct: 1 MINSPKKLGYRMPAEYEPHHGTLMIWPTR---PGSWPYQGKAAKKAFSQIIKTIAEGETV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+ L +++ +++ N +W RDTGPTI+VN + K+A +DW
Sbjct: 58 YLLVEQDYLSEAQDYLGDSVIYLDIPTNDAWARDTGPTILVND-------KCQKLA-VDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEDDDQVASRFAEELEMPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHLTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSSGRNPHLTKEEIENTLLECLGAEKVIWLPYGIY 206
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKVVLVPQFEDVN-DQVALEILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|384252090|gb|EIE25567.1| hypothetical protein COCSUDRAFT_22766 [Coccomyxa subellipsoidea
C-169]
Length = 374
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 124/215 (57%), Gaps = 14/215 (6%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQ-WE 72
MP E+EPH CWMGWP + WR+ A++ +A VA AIS+FEP+ + A+ +
Sbjct: 1 MPGEFEPHVGCWMGWPESDDSKYLWREGGEPARQAYANVAKAISQFEPLFMIANPGEPAA 60
Query: 73 NARSQLPE--NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
NAR E N+ V+E+ +N W RD GP+ + +VAG+ W+++ +G
Sbjct: 61 NARKVFAESPNVTVVEIPINDGWTRDWGPSCIARDVDGKR-----EVAGVHWDYDCYGAP 115
Query: 131 DD------GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL 184
+W D+ R +L+T LP F + LEGGSIH DG+GT + TEECLL
Sbjct: 116 GKIAQGRPAMMPNWDKDVAAGRALLTTNGLPVFEAPLHLEGGSIHSDGQGTMVVTEECLL 175
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
+ +RNPHL K IEN LK YLG+ KIIWL RG+ G
Sbjct: 176 DPSRNPHLDKAGIENILKEYLGLEKIIWLWRGMEG 210
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 54/77 (70%), Gaps = 4/77 (5%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDK--KWDGEAVRVLSQAF-PKYEVVGIERARE 284
PRL G R+ A+Y+N Y ANGG++ PQFG + D A+ L +A+ P Y+VVG+ ++RE
Sbjct: 297 PRLPGVRMPATYINHYAANGGVVVPQFGGTAAETDRLAIETLQKAYGPDYKVVGV-KSRE 355
Query: 285 IVLGGGNIHCITQQQPA 301
++L GNIHCITQQ A
Sbjct: 356 VLLNAGNIHCITQQHVA 372
>gi|225861185|ref|YP_002742694.1| agmatine deiminase [Streptococcus pneumoniae Taiwan19F-14]
gi|298230760|ref|ZP_06964441.1| agmatine deiminase [Streptococcus pneumoniae str. Canada MDR_19F]
gi|298254581|ref|ZP_06978167.1| agmatine deiminase [Streptococcus pneumoniae str. Canada MDR_19A]
gi|298503066|ref|YP_003725006.1| agmatine deiminase [Streptococcus pneumoniae TCH8431/19A]
gi|387788402|ref|YP_006253470.1| agmatine deiminase [Streptococcus pneumoniae ST556]
gi|417312496|ref|ZP_12099208.1| agmatine deiminase [Streptococcus pneumoniae GA04375]
gi|418082850|ref|ZP_12720051.1| agmatine deiminase [Streptococcus pneumoniae GA44288]
gi|418084990|ref|ZP_12722174.1| agmatine deiminase [Streptococcus pneumoniae GA47281]
gi|418093753|ref|ZP_12730882.1| agmatine deiminase [Streptococcus pneumoniae GA49138]
gi|418100751|ref|ZP_12737837.1| agmatine deiminase [Streptococcus pneumoniae 7286-06]
gi|418118786|ref|ZP_12755743.1| agmatine deiminase [Streptococcus pneumoniae GA18523]
gi|418141511|ref|ZP_12778324.1| agmatine deiminase [Streptococcus pneumoniae GA13455]
gi|418150390|ref|ZP_12787141.1| agmatine deiminase [Streptococcus pneumoniae GA14798]
gi|418152655|ref|ZP_12789395.1| agmatine deiminase [Streptococcus pneumoniae GA16121]
gi|418197750|ref|ZP_12834213.1| agmatine deiminase [Streptococcus pneumoniae GA47778]
gi|418223545|ref|ZP_12850185.1| agmatine deiminase [Streptococcus pneumoniae 5185-06]
gi|418227507|ref|ZP_12854126.1| agmatine deiminase [Streptococcus pneumoniae 3063-00]
gi|419424948|ref|ZP_13965147.1| agmatine deiminase [Streptococcus pneumoniae 7533-05]
gi|419427408|ref|ZP_13967591.1| agmatine deiminase [Streptococcus pneumoniae 5652-06]
gi|419429084|ref|ZP_13969251.1| agmatine deiminase [Streptococcus pneumoniae GA11856]
gi|419435789|ref|ZP_13975882.1| agmatine deiminase [Streptococcus pneumoniae 8190-05]
gi|419438023|ref|ZP_13978093.1| agmatine deiminase [Streptococcus pneumoniae GA13499]
gi|419444858|ref|ZP_13984873.1| agmatine deiminase [Streptococcus pneumoniae GA19923]
gi|419448562|ref|ZP_13988559.1| agmatine deiminase [Streptococcus pneumoniae 4075-00]
gi|419451261|ref|ZP_13991247.1| agmatine deiminase [Streptococcus pneumoniae EU-NP02]
gi|419501652|ref|ZP_14041338.1| agmatine deiminase [Streptococcus pneumoniae GA47628]
gi|419518716|ref|ZP_14058323.1| agmatine deiminase [Streptococcus pneumoniae GA08825]
gi|254802198|sp|C1CRX2.1|AGUA_STRZT RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|225728149|gb|ACO24000.1| agmatine deiminase [Streptococcus pneumoniae Taiwan19F-14]
gi|298238661|gb|ADI69792.1| agmatine deiminase [Streptococcus pneumoniae TCH8431/19A]
gi|327389204|gb|EGE87549.1| agmatine deiminase [Streptococcus pneumoniae GA04375]
gi|353756763|gb|EHD37362.1| agmatine deiminase [Streptococcus pneumoniae GA44288]
gi|353758685|gb|EHD39273.1| agmatine deiminase [Streptococcus pneumoniae GA47281]
gi|353765629|gb|EHD46171.1| agmatine deiminase [Streptococcus pneumoniae GA49138]
gi|353772687|gb|EHD53192.1| agmatine deiminase [Streptococcus pneumoniae 7286-06]
gi|353790738|gb|EHD71119.1| agmatine deiminase [Streptococcus pneumoniae GA18523]
gi|353805762|gb|EHD86036.1| agmatine deiminase [Streptococcus pneumoniae GA13455]
gi|353815898|gb|EHD96110.1| agmatine deiminase [Streptococcus pneumoniae GA14798]
gi|353819300|gb|EHD99498.1| agmatine deiminase [Streptococcus pneumoniae GA16121]
gi|353863906|gb|EHE43825.1| agmatine deiminase [Streptococcus pneumoniae GA47778]
gi|353878343|gb|EHE58173.1| agmatine deiminase [Streptococcus pneumoniae 5185-06]
gi|353883108|gb|EHE62917.1| agmatine deiminase [Streptococcus pneumoniae 3063-00]
gi|379138144|gb|AFC94935.1| agmatine deiminase [Streptococcus pneumoniae ST556]
gi|379538028|gb|EHZ03209.1| agmatine deiminase [Streptococcus pneumoniae GA13499]
gi|379551032|gb|EHZ16127.1| agmatine deiminase [Streptococcus pneumoniae GA11856]
gi|379572551|gb|EHZ37508.1| agmatine deiminase [Streptococcus pneumoniae GA19923]
gi|379602013|gb|EHZ66785.1| agmatine deiminase [Streptococcus pneumoniae GA47628]
gi|379615924|gb|EHZ80625.1| agmatine deiminase [Streptococcus pneumoniae 8190-05]
gi|379618861|gb|EHZ83536.1| agmatine deiminase [Streptococcus pneumoniae 5652-06]
gi|379620277|gb|EHZ84936.1| agmatine deiminase [Streptococcus pneumoniae 7533-05]
gi|379622966|gb|EHZ87600.1| agmatine deiminase [Streptococcus pneumoniae EU-NP02]
gi|379623620|gb|EHZ88253.1| agmatine deiminase [Streptococcus pneumoniae 4075-00]
gi|379641695|gb|EIA06230.1| agmatine deiminase [Streptococcus pneumoniae GA08825]
Length = 361
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLYEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEVLEKPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAVLVPQFEDVN-DQVAIDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|419527683|ref|ZP_14067226.1| agmatine deiminase [Streptococcus pneumoniae GA17719]
gi|379565836|gb|EHZ30827.1| agmatine deiminase [Streptococcus pneumoniae GA17719]
Length = 361
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLYEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEVLEKPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKTVLVPQFEDVN-DQVAIDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|417848558|ref|ZP_12494500.1| agmatine deiminase [Streptococcus mitis SK1073]
gi|339452490|gb|EGP65118.1| agmatine deiminase [Streptococcus mitis SK1073]
Length = 361
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 123/217 (56%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+ F+++ I++ E V
Sbjct: 1 MMDSPKKLGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKAAFSQIIKTIAEGEKV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L + + +++ N +W RDTGPTI+VN + K+A +DW
Sbjct: 58 YLLVERDYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVND-------KGQKLA-VDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEDDDQVASSFADVLEMPVYNAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHLTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSSGRNPHLTKEEIENTLLECLGAEKVIWLPYGIY 206
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF DK D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAVLVPQFQDKN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|149006404|ref|ZP_01830116.1| hypothetical protein CGSSp18BS74_03804 [Streptococcus pneumoniae
SP18-BS74]
gi|225856585|ref|YP_002738096.1| agmatine deiminase [Streptococcus pneumoniae P1031]
gi|410476364|ref|YP_006743123.1| agmatine deiminase [Streptococcus pneumoniae gamPNI0373]
gi|444388725|ref|ZP_21186699.1| agmatine deiminase [Streptococcus pneumoniae PCS125219]
gi|444389949|ref|ZP_21187864.1| agmatine deiminase [Streptococcus pneumoniae PCS70012]
gi|444393517|ref|ZP_21191162.1| agmatine deiminase [Streptococcus pneumoniae PCS81218]
gi|444395817|ref|ZP_21193356.1| agmatine deiminase [Streptococcus pneumoniae PNI0002]
gi|444397376|ref|ZP_21194859.1| agmatine deiminase [Streptococcus pneumoniae PNI0006]
gi|444399104|ref|ZP_21196576.1| agmatine deiminase [Streptococcus pneumoniae PNI0007]
gi|444403339|ref|ZP_21200441.1| agmatine deiminase [Streptococcus pneumoniae PNI0008]
gi|444405532|ref|ZP_21202408.1| agmatine deiminase [Streptococcus pneumoniae PNI0009]
gi|444408592|ref|ZP_21205225.1| agmatine deiminase [Streptococcus pneumoniae PNI0010]
gi|444409611|ref|ZP_21206199.1| agmatine deiminase [Streptococcus pneumoniae PNI0076]
gi|444411728|ref|ZP_21208056.1| agmatine deiminase [Streptococcus pneumoniae PNI0153]
gi|444415848|ref|ZP_21212069.1| agmatine deiminase [Streptococcus pneumoniae PNI0199]
gi|444418504|ref|ZP_21214480.1| agmatine deiminase [Streptococcus pneumoniae PNI0360]
gi|444420503|ref|ZP_21216282.1| agmatine deiminase [Streptococcus pneumoniae PNI0427]
gi|444422574|ref|ZP_21218225.1| agmatine deiminase [Streptococcus pneumoniae PNI0446]
gi|254802197|sp|C1CK08.1|AGUA_STRZP RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|147762181|gb|EDK69143.1| hypothetical protein CGSSp18BS74_03804 [Streptococcus pneumoniae
SP18-BS74]
gi|225724751|gb|ACO20603.1| agmatine deiminase [Streptococcus pneumoniae P1031]
gi|406369309|gb|AFS42999.1| agmatine deiminase [Streptococcus pneumoniae gamPNI0373]
gi|444248371|gb|ELU54880.1| agmatine deiminase [Streptococcus pneumoniae PCS125219]
gi|444255818|gb|ELU62158.1| agmatine deiminase [Streptococcus pneumoniae PNI0002]
gi|444256412|gb|ELU62750.1| agmatine deiminase [Streptococcus pneumoniae PCS70012]
gi|444259293|gb|ELU65608.1| agmatine deiminase [Streptococcus pneumoniae PCS81218]
gi|444260033|gb|ELU66341.1| agmatine deiminase [Streptococcus pneumoniae PNI0006]
gi|444264623|gb|ELU70686.1| agmatine deiminase [Streptococcus pneumoniae PNI0008]
gi|444269290|gb|ELU75101.1| agmatine deiminase [Streptococcus pneumoniae PNI0007]
gi|444269419|gb|ELU75226.1| agmatine deiminase [Streptococcus pneumoniae PNI0010]
gi|444273143|gb|ELU78822.1| agmatine deiminase [Streptococcus pneumoniae PNI0009]
gi|444275625|gb|ELU81247.1| agmatine deiminase [Streptococcus pneumoniae PNI0153]
gi|444278835|gb|ELU84259.1| agmatine deiminase [Streptococcus pneumoniae PNI0199]
gi|444279145|gb|ELU84555.1| agmatine deiminase [Streptococcus pneumoniae PNI0076]
gi|444281294|gb|ELU86618.1| agmatine deiminase [Streptococcus pneumoniae PNI0360]
gi|444284470|gb|ELU89608.1| agmatine deiminase [Streptococcus pneumoniae PNI0427]
gi|444288080|gb|ELU92982.1| agmatine deiminase [Streptococcus pneumoniae PNI0446]
Length = 361
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEALGRPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 88/170 (51%), Gaps = 20/170 (11%)
Query: 149 LSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIENEL---- 201
L E++ P+ + + + HVD + E +L + +P + + EL
Sbjct: 193 LGAEKVIWLPYGIYQDETNEHVDNVAAFVGPAELVLAWTDDENDPQYAMSKADLELLEQE 252
Query: 202 -----------KAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGII 250
K + ++ + L G I++ + R AG RLAASYVNFYIAN ++
Sbjct: 253 TDAKGCHFTIHKLPIPAVRQVVTEEDLPGYIYEEGEEKRYAGERLAASYVNFYIANKAVL 312
Query: 251 TPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIHCITQQ P
Sbjct: 313 VPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIHCITQQIP 360
>gi|386842710|ref|YP_006247768.1| agmatine deiminase [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|374103011|gb|AEY91895.1| agmatine deiminase [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|451796002|gb|AGF66051.1| agmatine deiminase [Streptomyces hygroscopicus subsp. jinggangensis
TL01]
Length = 346
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 116/214 (54%), Gaps = 12/214 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TPA G+ MPAEW PH + WM WP D+ DD A+ +A VA A+ +FEPVTV
Sbjct: 3 TPAADGFRMPAEWAPHERTWMAWPSPNPTFDD-PDDLAAARTAWASVARAVRRFEPVTVV 61
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
Q + AR+ L + +E ++ +W RD GPT + + ++A +DW FN
Sbjct: 62 CGPGQSDEARALLGPGVDTVERDLDDAWMRDIGPTFLTDGRG--------RLAAVDWTFN 113
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
WG + + W D ++ + + +V EGG+IHVDGEGT L TE L
Sbjct: 114 GWGAQN---WARWEHDARIGAYVSDLAGAKTYASKLVNEGGAIHVDGEGTVLLTETVQLG 170
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
RNPH TK ++E E+ A+LG K IWLPRGL G
Sbjct: 171 PERNPHWTKEEVEAEIHAHLGTSKAIWLPRGLTG 204
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ +GG++ F D + D A + + FP+ V ++ AR I GGG IHCITQ
Sbjct: 284 SYINHYLCSGGVVLCGFDDPR-DEIAAGIFRRLFPQRTVTLVD-ARTIFAGGGGIHCITQ 341
Query: 298 QQPAI 302
QQP +
Sbjct: 342 QQPKV 346
>gi|421293943|ref|ZP_15744666.1| agmatine deiminase [Streptococcus pneumoniae GA56113]
gi|395894233|gb|EJH05213.1| agmatine deiminase [Streptococcus pneumoniae GA56113]
Length = 360
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 119/214 (55%), Gaps = 12/214 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
+P GY MPAE+EPH M WP R +W A+R F ++ I++ E V +
Sbjct: 3 SPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIETIAEGERVYLL 59
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A A+S L + + +++ N +W RDTGPTI+VN K +DW FN
Sbjct: 60 VEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDWAFN 111
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE CLL
Sbjct: 112 AWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTESCLL 171
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 172 SPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 205
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 88/170 (51%), Gaps = 20/170 (11%)
Query: 149 LSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIENEL---- 201
L E++ P+ + + + HVD + E +L + +P + + EL
Sbjct: 192 LGAEKVIWLPYGIYQDETNEHVDNVAAFVGPAELVLAWTDDENDPQYAMSKADLELLEQE 251
Query: 202 -----------KAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGII 250
K + ++ + L G I++ + R AG RLAASYVNFYIAN ++
Sbjct: 252 TDAKGCHFTIHKLPIPAVRQVVTEEDLPGYIYEEGEEKRYAGERLAASYVNFYIANKAVL 311
Query: 251 TPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIHCITQQ P
Sbjct: 312 VPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIHCITQQIP 359
>gi|418182550|ref|ZP_12819111.1| agmatine deiminase [Streptococcus pneumoniae GA43380]
gi|353850787|gb|EHE30791.1| agmatine deiminase [Streptococcus pneumoniae GA43380]
Length = 361
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 121/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRSFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ +N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLSEAQSYLGDKVVYLDIPINDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEALGKPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|194398758|ref|YP_002037558.1| agmatine deiminase [Streptococcus pneumoniae G54]
gi|194358425|gb|ACF56873.1| agmatine deiminase [Streptococcus pneumoniae G54]
Length = 379
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKDAKRAFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I L
Sbjct: 296 RLAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDIXL 347
>gi|417924436|ref|ZP_12567878.1| agmatine deiminase [Streptococcus mitis SK569]
gi|418966585|ref|ZP_13518314.1| agmatine deiminase [Streptococcus mitis SK616]
gi|342835960|gb|EGU70187.1| agmatine deiminase [Streptococcus mitis SK569]
gi|383346920|gb|EID24927.1| agmatine deiminase [Streptococcus mitis SK616]
Length = 361
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 124/217 (57%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F+++ I++ E V
Sbjct: 1 MMDSPQKLGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFSQIIKTIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ +S L + + +++ N +W RDTGPTI+VN + K+A +DW
Sbjct: 58 YLLVDQDYLAEVQSYLGDKVVYLDIPTNDAWARDTGPTILVND-------EGQKLA-VDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYQDDDQVASRFAEALEIPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHL+K +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPHLSKEEIENTLLECLGAEKVIWLPYGIY 206
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN I+ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAILVPQFQDGN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|421274823|ref|ZP_15725655.1| agmatine deiminase [Streptococcus pneumoniae GA52612]
gi|395875551|gb|EJG86632.1| agmatine deiminase [Streptococcus pneumoniae GA52612]
Length = 360
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 119/214 (55%), Gaps = 12/214 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
+P GY MPAE+EPH M WP R +W A+R F ++ I++ E V +
Sbjct: 3 SPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKDAKRAFTQIIETIAEGERVYLL 59
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A A+S L + + +++ N +W RDTGPTI+VN K +DW FN
Sbjct: 60 VEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDWAFN 111
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE CLL
Sbjct: 112 AWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTESCLL 171
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 172 SPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 205
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 295 RLAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 352
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 353 CITQQIP 359
>gi|417934668|ref|ZP_12577988.1| agmatine deiminase [Streptococcus mitis bv. 2 str. F0392]
gi|340771238|gb|EGR93753.1| agmatine deiminase [Streptococcus mitis bv. 2 str. F0392]
Length = 361
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A++ F+++ I++ E V
Sbjct: 1 MMDSPKKLGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKKAFSQIIKTIAERETV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L + + +++ N +W RDTGPTI++N +DW
Sbjct: 58 YLLVEQDHLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILLNDKREK--------LAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG GT L TE
Sbjct: 110 SFNAWGGTVDGLYQDYEEDNQVASRFAEALEMPVYDAKPFVLEGGAIHSDGRGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHL+K +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPHLSKEEIENTLLDSLGAEKVIWLPYGIY 206
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAVLVPQFQDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|309800152|ref|ZP_07694338.1| agmatine deiminase [Streptococcus infantis SK1302]
gi|308116199|gb|EFO53689.1| agmatine deiminase [Streptococcus infantis SK1302]
Length = 361
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 123/217 (56%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH + WP R +W A++ F ++ IS+ E V
Sbjct: 1 MMDSPKKLGYRMPAEYEPHHGTLLIWPTR---PGSWPFQGKAAKKAFTQIIKTISEGETV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L + + +++ N +W RDTGPTI++N Q K+A +DW
Sbjct: 58 YLLVEQDYLFEAQSYLGDKVVYLDIQTNDAWARDTGPTILLND-------QREKLA-VDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEADDQVASRFAEVLNIPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHLTK +IE L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPHLTKEEIEKTLLESLGAEKVIWLPYGIY 206
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYI N ++ PQF D D A+ +LSQ FP EVVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIVNKSVLVPQFQDVN-DQVALDILSQCFPDREVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|237821876|ref|ZP_04597721.1| agmatine deiminase [Streptococcus pneumoniae CCRI 1974M2]
gi|418143731|ref|ZP_12780531.1| agmatine deiminase [Streptococcus pneumoniae GA13494]
gi|353809472|gb|EHD89732.1| agmatine deiminase [Streptococcus pneumoniae GA13494]
Length = 360
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 119/214 (55%), Gaps = 12/214 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
+P GY MPAE+EPH M WP R +W A+R F ++ I++ E V +
Sbjct: 3 SPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIETIAEGERVYLL 59
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A A+S L + + +++ N +W RDTGPTI+VN K +DW FN
Sbjct: 60 VEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDWAFN 111
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE CLL
Sbjct: 112 AWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTESCLL 171
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 172 SPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 205
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 295 RLAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 352
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 353 CITQQIP 359
>gi|419495236|ref|ZP_14034954.1| agmatine deiminase [Streptococcus pneumoniae GA47461]
gi|421303139|ref|ZP_15753803.1| agmatine deiminase [Streptococcus pneumoniae GA17484]
gi|379595318|gb|EHZ60126.1| agmatine deiminase [Streptococcus pneumoniae GA47461]
gi|395901761|gb|EJH12697.1| agmatine deiminase [Streptococcus pneumoniae GA17484]
Length = 361
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F ++ I++ E V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRSFTQIIETIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 58 YLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 110 AFNAWGGTYDGLYQDYEEDDQVASRFAEALGRPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 206
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 88/170 (51%), Gaps = 20/170 (11%)
Query: 149 LSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIENEL---- 201
L E++ P+ + + + HVD + E +L + +P + + EL
Sbjct: 193 LGAEKVIWLPYGIYQDETNEHVDNVAAFVGPAEVVLAWTDDENDPQYAMSKADLELLEQE 252
Query: 202 -----------KAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGII 250
K + ++ + L G I++ + R AG RLAASYVNFYIAN ++
Sbjct: 253 TDAKGCHFTIHKLPIPAVRQVVTEEDLPGYIYEEGEEKRYAGERLAASYVNFYIANKAVL 312
Query: 251 TPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIHCITQQ P
Sbjct: 313 VPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIHCITQQIP 360
>gi|116669324|ref|YP_830257.1| peptidyl-arginine deiminase [Arthrobacter sp. FB24]
gi|116609433|gb|ABK02157.1| agmatine deiminase [Arthrobacter sp. FB24]
Length = 336
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/347 (33%), Positives = 161/347 (46%), Gaps = 72/347 (20%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAE P + WM +P L + ++A A+ V+A VA A +FEPVT+ +
Sbjct: 1 MPAETAPQERIWMAFPTGGYTLGDTAEEAHAARTVWAAVANAAVEFEPVTMVVTPDDVLT 60
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
A L + V+ +N +W RD GPT V++ ++ +DW FN WGG +
Sbjct: 61 AARYLDPAVEVLTADLNDAWMRDIGPTFVLDGDG--------RLGAVDWVFNGWGGQE-- 110
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ W D + ++ ++V EGG I VDGEGT L TE L+ RNP L+
Sbjct: 111 -WARWDKDSLIGAEVAGRSGARHIASALVNEGGGIQVDGEGTVLVTETVQLDPGRNPGLS 169
Query: 194 KGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIHDGEAKPR- 229
K ++E EL +G +IWLPRGL FG ++H +
Sbjct: 170 KAEVEAELARTIGATHVIWLPRGLTRDSERFGTRGHVDIVAAIPSPGTLLVHSQQDPEHP 229
Query: 230 -----------LAGTRLAA------------------------SYVNFYIANGGIITPQF 254
L+ TR AA SY+N + NGG+I F
Sbjct: 230 DFEVSREIINFLSATRDAAGREWNIIEVPAPVALSDPEGFVDYSYINHLVVNGGVIACTF 289
Query: 255 GDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
GD D +A+R+L+ A+P VVGI+ ARE+ GG IHCITQQQPA
Sbjct: 290 GDPN-DEKALRILADAYPGRRVVGID-ARELFARGGGIHCITQQQPA 334
>gi|418136953|ref|ZP_12773795.1| agmatine deiminase [Streptococcus pneumoniae GA11663]
gi|353901580|gb|EHE77112.1| agmatine deiminase [Streptococcus pneumoniae GA11663]
Length = 360
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 119/214 (55%), Gaps = 12/214 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
+P GY MPAE+EPH M WP R +W A+R F ++ I++ E V +
Sbjct: 3 SPKKLGYHMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIETIAEGERVYLL 59
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A A+S L + + +++ N +W RDTGPTI+VN K +DW FN
Sbjct: 60 VEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDWAFN 111
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE CLL
Sbjct: 112 AWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTESCLL 171
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 172 SPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 205
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 295 RLAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 352
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 353 CITQQIP 359
>gi|331266384|ref|YP_004326014.1| amino acid deiminase superfamily protein [Streptococcus oralis Uo5]
gi|326683056|emb|CBZ00673.1| amino acid deiminase superfamily protein [Streptococcus oralis Uo5]
Length = 361
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 125/217 (57%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+R F+++ I++ E V
Sbjct: 1 MMDSPKKLGYRMPAEYEPHHGTIMIWPTR---PGSWPFQGKAAKRAFSQIIKTIAEGETV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L + + +++ N +W RDTGPTI+VN + K+A +DW
Sbjct: 58 YLLVEQDYQSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVND-------KRDKLA-VDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEDDDQVASRFAQALEMPVYEAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+L+K +IEN L LG K+IWLP G++
Sbjct: 170 CLLSAGRNPYLSKEEIENTLLECLGAEKVIWLPYGIY 206
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 50/66 (75%), Gaps = 2/66 (3%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
LAASYVNFYIAN ++ PQF D D A+ +LS+ FP +V+GI AR+I+LGGGNIHC
Sbjct: 297 LAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVIGIP-ARDILLGGGNIHC 354
Query: 295 ITQQQP 300
ITQQ P
Sbjct: 355 ITQQIP 360
>gi|374710351|ref|ZP_09714785.1| agmatine deiminase [Sporolactobacillus inulinus CASD]
Length = 351
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 125/218 (57%), Gaps = 21/218 (9%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
Y MPAEW+ H+ ++ WPVR ++ R +A A AI++FEPV + + +
Sbjct: 8 YRMPAEWQTHACTFLSWPVRASMCA--PENYAPVCRGYAAFAQAIAEFEPVVLLINENEE 65
Query: 72 ENARSQL-----PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
E S L P N+RV + N SW RD GPT ++N+ ++AG++W FN+
Sbjct: 66 ERVTSFLHPSAYPINLRV--LPHNDSWVRDNGPTFLINEQE--------ELAGVNWRFNA 115
Query: 127 WGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNK 186
WGG Y W LD +A K+L + R+ +V+EGGS HVDGEG+ LTTE+CLLN
Sbjct: 116 WGGK----YTPWDLDDALAAKLLDELGIQRYDAPLVMEGGSFHVDGEGSLLTTEQCLLNP 171
Query: 187 NRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
NRNP L + QIE LK YL + K+IWL GL G DG
Sbjct: 172 NRNPELDRAQIEQILKEYLNISKVIWLKNGLSGDETDG 209
>gi|418975258|ref|ZP_13523167.1| agmatine deiminase [Streptococcus oralis SK1074]
gi|383348629|gb|EID26588.1| agmatine deiminase [Streptococcus oralis SK1074]
Length = 361
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 121/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M TP GY MPAE+EPH M WP R +W A+R F+++ I++ E V
Sbjct: 1 MIETPKKAGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFSQIIKTIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L +++ +++ N +W RDTGPTI+VN +DW
Sbjct: 58 YILVEQDHRSEAQSYLGDSVVYLDIPTNDAWARDTGPTILVNDKREK--------LAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+++ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGTVDGLYQNYEEDDQVASRFAEALEMPAYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHL+K +IE L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPHLSKEEIEITLLESLGAEKVIWLPYGIY 206
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|116620676|ref|YP_822832.1| peptidyl-arginine deiminase [Candidatus Solibacter usitatus
Ellin6076]
gi|116223838|gb|ABJ82547.1| Porphyromonas-type peptidyl-arginine deiminase [Candidatus
Solibacter usitatus Ellin6076]
Length = 326
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 113/341 (33%), Positives = 155/341 (45%), Gaps = 67/341 (19%)
Query: 10 HGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
+ MPAEWEPH W+ WP + R D W V+ ++ +S+ E V + +
Sbjct: 4 QDFRMPAEWEPHLATWIAWP--HNRAD-WPGRFAPIPWVYGEIVRKLSQVERVRILIQSP 60
Query: 70 QWENARSQLPENI-------RVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
E ++ E + E + W RD P V N+ + A W
Sbjct: 61 ALEKQARRILEKVGANLDAVEFFECETDRVWTRDYCPLFVKNRRG--------ETALTAW 112
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+W Y +W D V + +LP F MVLEGGSI V+G G LTTEEC
Sbjct: 113 RFNAWAK-----YDNWQNDSAVPAHLGKRLKLPVFKPGMVLEGGSIDVNGAGVLLTTEEC 167
Query: 183 LLN--KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG------------------MIH 222
LL+ + RNP L++ +IE L YLGV +++WL G+ G ++
Sbjct: 168 LLSPIQARNPELSRLEIERRLADYLGVDRVVWLRTGIAGDDTHGHVDDLARFVNPETVVL 227
Query: 223 DGEAKPR----------------------LAGTRLAASYVNFYIANGGIITPQFGDKKWD 260
EA P AG RL ASY NFYIAN ++ P F D D
Sbjct: 228 CAEADPADYATLRVAGLKVVKLPMPRPLVFAGQRLPASYANFYIANALVLVPTFNDPN-D 286
Query: 261 GEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
A+ +L++ FP EVVGI E++ G G +HC+TQQQPA
Sbjct: 287 RAALTILAKQFPDREVVGIN-CTELIWGLGALHCMTQQQPA 326
>gi|410028001|ref|ZP_11277837.1| peptidyl-arginyl deiminase [Marinilabilia sp. AK2]
Length = 350
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 163/362 (45%), Gaps = 77/362 (21%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
+E TP GY PAE+ PH+ W+ WP + +W +A+ +++ E
Sbjct: 3 IENGKTPLELGYTFPAEFNPHAATWLSWP---HKEASWPGKIATIFSAYAQFIKLLAEGE 59
Query: 61 PVTVCASAAQWEN---ARSQLPE----NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQ 113
V + + + E + Q+ E + N +W RD GP ++N+ +A
Sbjct: 60 EVHINVADQKMEEFALSHLQMAEADLSKVFFHHFPTNDAWCRDHGPAFLINEKAAQ---- 115
Query: 114 APKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGE 173
+ A + W +N+WG Y + LD ++ I +P F +++EGGSI V+G+
Sbjct: 116 --RKALVKWKYNAWGDK----YPPYDLDNEIPFHIAKYRDIPCFTPGIIMEGGSIEVNGK 169
Query: 174 GTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG----------------- 216
GT +TTE CLLN NRNPHL+K QIE L+ Y GV I+WL G
Sbjct: 170 GTLMTTEACLLNSNRNPHLSKSQIEKYLRDYYGVENILWLKDGIMGDDTDGHIDDLTRFV 229
Query: 217 --------------------------LFGMIHDGEAKPR------------LAGTRLAAS 238
L M+ KP RL AS
Sbjct: 230 NEDTVVTVVEHDKQDENYQALKENTELLSMLKLENGKPLKIIELPMPAPVIYEDMRLPAS 289
Query: 239 YVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQ 298
Y NFYIAN +I P F DK D +A+ VL FP +VVG++ + +++ G G+ HC++QQ
Sbjct: 290 YANFYIANKHVIVPTFQDKN-DEKALGVLQTCFPDRKVVGVD-SWDLIWGLGSFHCLSQQ 347
Query: 299 QP 300
+P
Sbjct: 348 EP 349
>gi|359463674|ref|ZP_09252237.1| peptidyl-arginine deiminase [Acaryochloris sp. CCMEE 5410]
Length = 336
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 163/354 (46%), Gaps = 83/354 (23%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRD-DALHAQRVFAKVATAISKFEPVTVCASAAQWE 72
MP E EPH Q WM + E WR L QR A++A I+ +E +++ +E
Sbjct: 1 MPDEGEPHKQTWMAFIASDEI---WRQRQVLEVQRNLAEIAKTIANYEAISMLVRQQDYE 57
Query: 73 NARSQL------PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
A L P I++IE ++N W RDTGP+ V++++ A I++NFN
Sbjct: 58 LAVELLGGLESHPFPIQLIEFTINDLWIRDTGPSFVIDENGNK--------AAINFNFNG 109
Query: 127 WGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNK 186
WG +D Y+ D +VA + + S+VLEGG +DG+GT + TE C+LN
Sbjct: 110 WG--EDQAYQ---YDAKVAHFVAQQAGVTTIKSSLVLEGGCFELDGQGTAIMTESCILND 164
Query: 187 NRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGM-IHDGE-------AKPRLA------- 231
NRNP K ++E ELK LG+ KIIWL G+ G I DG AKP +
Sbjct: 165 NRNPGRNKNEVEVELKQLLGLKKIIWL-EGIKGKDITDGHTDFYARFAKPGVVIVSREAD 223
Query: 232 ------------------------------------------GTR-LAASYVNFYIANGG 248
GT+ AA YV +Y+ NG
Sbjct: 224 QSSSDYPVTQKNIEALKRATDAMGRPLELIVLETPLKINTKFGTKDFAAGYVGYYLCNGA 283
Query: 249 IITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
+I +FGD K D A + L+ FP ++ + I GGG+IHC TQQ+P +
Sbjct: 284 VIMQKFGDSKADDAARKKLATVFPHRQIEQLS-IDGIASGGGSIHCATQQEPLV 336
>gi|108743468|dbj|BAE95571.1| putative agmatine deiminase [Streptomyces kanamyceticus]
Length = 320
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 166/332 (50%), Gaps = 73/332 (21%)
Query: 26 MGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVI 85
M WP R + D D Q +A+VA AI++FEPVT+ A + AR++ + + V+
Sbjct: 1 MAWPTRVDLWDGVLD---QVQGEYAQVARAIAEFEPVTMVAPPGYGDAARARCGDGVDVL 57
Query: 86 EMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDLQVA 145
E+ ++ SWFRD+ P V++ AG+D+ FN+WG + + D +++
Sbjct: 58 ELPLDDSWFRDSAPLFVLDGDGHR--------AGVDFRFNAWGR----KHHPYDSDDRIS 105
Query: 146 RKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYL 205
+L + R P M+LEGG+I VDGEGT +TTE+CLL+ NRNP L++ +IE ELK+ L
Sbjct: 106 ALLLDHLGVERLPSDMILEGGAITVDGEGTLITTEQCLLHPNRNPDLSRAEIEAELKSLL 165
Query: 206 GVMKIIWLP--------------------------------------------RGLFGMI 221
GV K+IWLP R +
Sbjct: 166 GVEKVIWLPYGGLLDTETDGHVDGVCAFAAPGKVVVSLPADPAHADHARMRANRAVLAAS 225
Query: 222 HDGEAKP------------RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQ 269
D + +P + G + SY+N+Y+ANGG++ P G D +A+ V++
Sbjct: 226 TDAKGRPLEIVDVPQTVFTEVTGGEVEVSYLNYYVANGGVVVPVAG-LPADEDALAVIAA 284
Query: 270 AFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
A+P +VV RA + GGG +HCITQQ PA
Sbjct: 285 AYPGRKVV-GVRAAAVAYGGGGVHCITQQIPA 315
>gi|322387826|ref|ZP_08061434.1| agmatine deiminase [Streptococcus infantis ATCC 700779]
gi|419843838|ref|ZP_14367143.1| agmatine deiminase [Streptococcus infantis ATCC 700779]
gi|321141328|gb|EFX36825.1| agmatine deiminase [Streptococcus infantis ATCC 700779]
gi|385702262|gb|EIG39407.1| agmatine deiminase [Streptococcus infantis ATCC 700779]
Length = 361
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 119/217 (54%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W + A+ F+++ I++ E V
Sbjct: 1 MMDSPKKLGYCMPAEYEPHHGTLMIWPTR---PGSWPFEGKAAKAAFSRIIKTIAQGETV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L + + +++ N +W RDTGPTI++N +DW
Sbjct: 58 YLLVEEDYLSEAQSYLGDKVVYLDIQTNDAWARDTGPTILLNDKREK--------LAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA +P + V+EGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEADDQVASSFAEVLDIPVYDAKPFVMEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHLTK QIE L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPHLTKEQIEKILLESLGAEKVIWLPYGIY 206
>gi|441149055|ref|ZP_20965092.1| peptidyl-arginine deiminase [Streptomyces rimosus subsp. rimosus
ATCC 10970]
gi|440619640|gb|ELQ82683.1| peptidyl-arginine deiminase [Streptomyces rimosus subsp. rimosus
ATCC 10970]
Length = 389
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 160/348 (45%), Gaps = 76/348 (21%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAEW PH+ ++ WP W+D A QR A++A ++++EPV + A+ +
Sbjct: 54 MPAEWGPHAATYLAWP---PADSPWKDQAPAVQRDIARLARTLAEYEPVVLLAAPEEKAQ 110
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
AR+ ++ ++ + ++ W RDTGP + V + + S G P AG+D +FN WGG
Sbjct: 111 ARAGCGTSVEIVPIPVDDLWIRDTGP-VFVTRPATSPG---PGRAGVDLHFNGWGG---- 162
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ D VAR +L + R +V EGGS+ VDGEGT L TE L+N NRNP T
Sbjct: 163 -KQRHPRDAGVARGLLGHAGIARIDAGIVAEGGSVEVDGEGTLLATESSLVNPNRNPGRT 221
Query: 194 KGQIENELKAYLGVMKIIWL---------------------------------------- 213
+ +IE EL LGV +++WL
Sbjct: 222 RAEIERELCRVLGVSRVVWLAGVRGEDITDCHVDTIARFVEPGVVALNRPWKGDGPDVWT 281
Query: 214 -----PRGLFGMIHDGEAK-----------PRLAGTRLAASYVNF---YIANGGIITPQF 254
RG+ D + P G R A ++ Y+ANG ++ P+F
Sbjct: 282 RVYEQARGVLMKARDARGRRLEIVEVEEPDPYAIGDRGPAFLASYLNYYVANGVVVLPRF 341
Query: 255 GDKKWDGEAVRVLSQAFPKYEV--VGIERAREIVLGGGNIHCITQQQP 300
GD++ D A VL + P E+ V I+ E GGG +HC TQQ P
Sbjct: 342 GDRRADDRAAGVLRELHPGREIRQVSIDAVGE---GGGGVHCATQQVP 386
>gi|222153444|ref|YP_002562621.1| agmatine deiminase [Streptococcus uberis 0140J]
gi|222114257|emb|CAR42866.1| Porphyromonas-type peptidyl-arginine deiminase [Streptococcus
uberis 0140J]
Length = 366
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 124/214 (57%), Gaps = 12/214 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
+P G+ MPAE+E H M WP R +W +A A+ F+++ IS+ E V +
Sbjct: 3 SPKNMGFHMPAEYEKHHGTLMIWPTR---PGSWPFEAKAAKEAFSRIIQVISESEQVYLL 59
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A + A++ L + +++ N +W RDTGPTI+ N AQ +A +DW FN
Sbjct: 60 VEKAYLQEAKTFLGDKPIYLDIPTNDAWARDTGPTILRN-------AQKEALA-VDWAFN 111
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLL 184
+WGG DG Y+D+ D VA + +PRF H VLEGG+IH DGEGT L TE CLL
Sbjct: 112 AWGGSFDGLYQDYEADDLVASRFSKALGIPRFDAHPFVLEGGAIHSDGEGTILVTESCLL 171
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
+ RNP+L+K +IE L YLG KIIWLP G++
Sbjct: 172 SGGRNPNLSKDEIEASLVNYLGAEKIIWLPYGIY 205
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
LAASYVNFYI N ++ PQF D D A+ +L++ FP ++ GI AR+I++GGGNIHC
Sbjct: 296 LAASYVNFYICNQAVLVPQFDDVH-DHLALELLAELFPDRKIQGIP-ARDILVGGGNIHC 353
Query: 295 ITQQQPAIPTNA 306
ITQQ P A
Sbjct: 354 ITQQIPLFEKGA 365
>gi|291535390|emb|CBL08502.1| agmatine deiminase [Roseburia intestinalis M50/1]
Length = 407
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/242 (39%), Positives = 130/242 (53%), Gaps = 27/242 (11%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M + TP G+ MP E+E H C M WP ER +WR+ A A+ F+ V AI+ E
Sbjct: 11 MIKDTTPVQDGFFMPGEFEQHQGCIMIWP---ERPGSWRNGAKEAETAFSAVIRAIAASE 67
Query: 61 PVTVCASAAQWENARS-----QLPENIR---VIEMSMNGSWFRDTGPTIVVNKS------ 106
V V A ++A++ + EN+ V EM + SW RD PT +VN++
Sbjct: 68 TVYVAAGKKGIDHAKAFAESLKKEENLHPVVVFEMETDDSWARDVAPTFLVNRTDGKISD 127
Query: 107 -------SASSG--AQAPKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF 157
+A +G + +V G++W+FN+WGG DG Y + D A +
Sbjct: 128 LTAEGNGTAQTGDDVKNSQVRGVNWSFNAWGGEVDGLYASYEKDNAFAWNFCRKFEFDCY 187
Query: 158 -PHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
VLEGGSIH DGEGT L TE CLL+ RNP LTK QIE +LK YLGV K++WLPRG
Sbjct: 188 DAEPFVLEGGSIHSDGEGTLLVTESCLLSAGRNPSLTKEQIEEQLKCYLGVEKVLWLPRG 247
Query: 217 LF 218
++
Sbjct: 248 IY 249
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 51/74 (68%), Gaps = 3/74 (4%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFG--DKKWDGEAVRVLSQAFPKYEVVGIERAREIV 286
R G RLAASYVNFY +N ++ P FG +++ D A +++++ P +++ + AR+I+
Sbjct: 334 REVGERLAASYVNFYFSNNAVVMPVFGGENEESDLRAQQIMAKLCPDRKIIPV-YARDIL 392
Query: 287 LGGGNIHCITQQQP 300
GGGNIHCITQQ P
Sbjct: 393 TGGGNIHCITQQIP 406
>gi|421277366|ref|ZP_15728186.1| agmatine deiminase [Streptococcus mitis SPAR10]
gi|395876647|gb|EJG87723.1| agmatine deiminase [Streptococcus mitis SPAR10]
Length = 361
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 124/217 (57%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A++ F+++ I++ E V
Sbjct: 1 MMDSPKKLGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKKAFSQIIKTIAQGETV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L +N+ +++ N +W RDTGPTI+++ Q K+A +DW
Sbjct: 58 YLLVEEDYLSEAQSYLGDNVVYLDIQTNDAWARDTGPTILLDY-------QREKLA-VDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEADDQVASRFAEVLEIPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP LTK +IE L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPLLTKEEIEKTLLESLGAEKVIWLPYGIY 206
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LSQ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKSVLVPQFQDVN-DQVALDILSQCFPDRDVVGI-TARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|240145065|ref|ZP_04743666.1| agmatine deiminase [Roseburia intestinalis L1-82]
gi|257202891|gb|EEV01176.1| agmatine deiminase [Roseburia intestinalis L1-82]
Length = 407
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/242 (39%), Positives = 130/242 (53%), Gaps = 27/242 (11%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M + TP G+ MP E+E H C M WP ER +WR+ A A+ F+ V AI+ E
Sbjct: 11 MIKDTTPVQDGFFMPGEFEQHQGCIMIWP---ERPGSWRNGAKEAETAFSAVIRAIAASE 67
Query: 61 PVTVCASAAQWENARS-----QLPENIR---VIEMSMNGSWFRDTGPTIVVNKS------ 106
V V A ++A++ + EN+ V EM + SW RD PT +VN++
Sbjct: 68 TVYVAAGKKGIDHAKAFAESLKKEENLHPVVVFEMETDDSWARDVAPTFLVNRTDGKISD 127
Query: 107 -------SASSG--AQAPKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF 157
+A +G + +V G++W+FN+WGG DG Y + D A +
Sbjct: 128 LTAAGNGTAQTGDDVKNSQVRGVNWSFNAWGGEVDGLYASYEKDNAFAWNFCRKFEFDCY 187
Query: 158 -PHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
VLEGGSIH DGEGT L TE CLL+ RNP LTK QIE +LK YLGV K++WLPRG
Sbjct: 188 DAEPFVLEGGSIHSDGEGTLLVTESCLLSAGRNPSLTKEQIEEQLKCYLGVEKVLWLPRG 247
Query: 217 LF 218
++
Sbjct: 248 IY 249
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 51/74 (68%), Gaps = 3/74 (4%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFG--DKKWDGEAVRVLSQAFPKYEVVGIERAREIV 286
R G RLAASYVNFY +N ++ P FG +++ D A +++++ P +++ + AR+I+
Sbjct: 334 REVGERLAASYVNFYFSNNAVVMPVFGGENEESDLRAQQIMAKLCPDRKIIPV-YARDIL 392
Query: 287 LGGGNIHCITQQQP 300
GGGNIHCITQQ P
Sbjct: 393 TGGGNIHCITQQIP 406
>gi|296138414|ref|YP_003645657.1| Agmatine deiminase [Tsukamurella paurometabola DSM 20162]
gi|296026548|gb|ADG77318.1| Agmatine deiminase [Tsukamurella paurometabola DSM 20162]
Length = 348
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 155/351 (44%), Gaps = 69/351 (19%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDAL-HAQRVFAKVATAISKFEPVTVCASAAQWE 72
MPAEW PH++ WM +PV L A+ +A+VA I+++EPVT+ A+
Sbjct: 4 MPAEWSPHARTWMAFPVANSTFGAEGSTPLGRARTAWARVAATIARYEPVTMVAAPGDEA 63
Query: 73 NARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDD 132
A S LP+++ V+ ++ +W RDTGPT V + + G + +DW FN WG
Sbjct: 64 VATSLLPDDVTVVTQPLDDAWIRDTGPTFVTDDA----GTDGILLRAVDWTFNGWGA--- 116
Query: 133 GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
+ W D ++ R++ P SMV EGG H+DG G+ L T+ L+ RNP
Sbjct: 117 QSWAAWENDARLGRRVADLAGAPVHDSSMVTEGGGFHIDGRGSVLLTDTVQLDPARNPGW 176
Query: 193 TKGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIH--DGEAK 227
T+ +E E+ +LG IWLPRGL FG ++H D A
Sbjct: 177 TREDVEREIHLHLGTTHAIWLPRGLSRDYDEFGTRGHVDIVAAFTPGGQVLLHRQDDPAH 236
Query: 228 PRLAGTR------------------------------LAASYVNFYIAN-----GGIITP 252
P TR +V++ N G +I
Sbjct: 237 PDHEVTRALRRVLEESTDATGHPLRILDLPAPSTLRDAEGEWVDYSYINHYVCNGAVILC 296
Query: 253 QFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIP 303
FGD D A +L +P V ++ AR++ GG IHCITQQQP P
Sbjct: 297 AFGDPDADERAREILRSCYPDRTVELVD-ARDVFAFGGGIHCITQQQPRTP 346
>gi|291538201|emb|CBL11312.1| agmatine deiminase [Roseburia intestinalis XB6B4]
Length = 407
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 130/242 (53%), Gaps = 27/242 (11%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M + TP G+ MP E+E H C M WP ER +WR+ A A+ F+ V AI+ E
Sbjct: 11 MIKDTTPVQDGFFMPGEFEQHQGCIMIWP---ERPGSWRNGAKEAETAFSAVIRAIAASE 67
Query: 61 PVTVCASAAQWENARS-----QLPENIR---VIEMSMNGSWFRDTGPTIVVNKS------ 106
V + A ++A++ + EN+ V EM + SW RD PT +VN++
Sbjct: 68 TVYIAAGKKGIDHAKAFAESLKKEENLHPVVVFEMETDDSWARDVAPTFLVNRTDGKISD 127
Query: 107 -------SASSG--AQAPKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF 157
+A +G + +V G++W+FN+WGG DG Y + D A +
Sbjct: 128 LTAAGNGTAQTGDDVKNSQVRGVNWSFNAWGGEVDGLYASYEKDNAFAWNFCRKFEFDCY 187
Query: 158 -PHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
VLEGGSIH DGEGT L TE CLL+ RNP LTK QIE +LK YLGV K++WLPRG
Sbjct: 188 DAEPFVLEGGSIHSDGEGTLLVTESCLLSAGRNPSLTKEQIEEQLKCYLGVEKVLWLPRG 247
Query: 217 LF 218
++
Sbjct: 248 IY 249
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 51/74 (68%), Gaps = 3/74 (4%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFG--DKKWDGEAVRVLSQAFPKYEVVGIERAREIV 286
R G RLAASYVNFY +N ++ P FG +++ D A +++++ P +++ + AR+I+
Sbjct: 334 REVGERLAASYVNFYFSNNAVVMPVFGGENEESDLRAQQIMAKLCPNRKIIPV-YARDIL 392
Query: 287 LGGGNIHCITQQQP 300
GGGNIHCITQQ P
Sbjct: 393 TGGGNIHCITQQIP 406
>gi|15807350|ref|NP_296080.1| hypothetical protein DR_2359 [Deinococcus radiodurans R1]
gi|6460171|gb|AAF11904.1|AE002066_8 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 357
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 161/354 (45%), Gaps = 74/354 (20%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP EW PH WMG+P E W + +A + I++FE V +
Sbjct: 13 TPRDLGFAMPPEWAPHEATWMGYPADDEL---WFGHLAGVRDEYAGLVRTIARFERVELL 69
Query: 66 ASAAQWE-NARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWN 123
+ E +AR++L N+R + ++ SW RD+GP V + G + P+VA ++W
Sbjct: 70 VRDEESERDARARLTGHNVRFHRVPLDDSWLRDSGPLFV------TRGEKDPEVALVNWR 123
Query: 124 FNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECL 183
FN+WGG +W D +V + + + VLEGG + + G+G LTT C
Sbjct: 124 FNAWGG-----KFEWENDNRVPEYVAQFLGMGHWDRPEVLEGGGLEIAGDGAALTTRSCF 178
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG------------------E 225
L RNP L++ L LGV K+ WL GL DG E
Sbjct: 179 LTDTRNPGLSEEGYTFLLSDQLGVKKLHWLDGGLENDHTDGHIDTITRFAAENVIVTSVE 238
Query: 226 AKP------------------------------------RLAGT--RLAASYVNFYIANG 247
A P RL G RL +Y NFYI NG
Sbjct: 239 ADPNDANHAVMQRNLATLRELRTPGGDFYQIVELPLPAHRLEGAEGRLPPTYANFYIGNG 298
Query: 248 GIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
++ PQ+GD D +A+ VL FP EV+G+ +R+I+ GGG+ HC+TQQQPA
Sbjct: 299 FVVVPQYGDPN-DKQALDVLRPLFPGREVIGVP-SRKIIEGGGSFHCLTQQQPA 350
>gi|78187369|ref|YP_375412.1| hypothetical protein Plut_1512 [Chlorobium luteolum DSM 273]
gi|78167271|gb|ABB24369.1| agmatine deiminase [Chlorobium luteolum DSM 273]
Length = 350
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 162/357 (45%), Gaps = 79/357 (22%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
Y+MPAEW PH W+ WP +L++W VF ++A +S E V + Q
Sbjct: 6 YVMPAEWAPHEATWLSWP---HKLESWPGKFEPVPAVFVELAAWLSSSEDVHINVLDEQM 62
Query: 72 ENARSQL----------PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
E+ L E + + ++ N +W RD GP V + +SG KV +D
Sbjct: 63 EDDVRALLLASGHPCLKMERVFLHQIPTNDAWCRDHGPNFVYH----TSGDTQEKVI-LD 117
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
W +N+WGG Y + D V +I + R+P MVLEGG+I V+GEG LTTE
Sbjct: 118 WEYNAWGGK----YEPYDDDNAVPSRIAAIRRMPLVSTGMVLEGGAIDVNGEGLLLTTEA 173
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEA--------------- 226
CLLN NRNP +++ IE +L +LG+ K++WL G+ G DG
Sbjct: 174 CLLNPNRNPTMSREDIERKLGRWLGIKKVLWLGDGIAGDDTDGHVDDMARFVSINTVVIA 233
Query: 227 ----------KPRLAGTRLAASYV------------------------------NFYIAN 246
KP L Y NFYIAN
Sbjct: 234 VEDDPEDENYKPLQKNYELLKGYTNLRGEPLRVVKLPMPDPVYYEGERLPASYANFYIAN 293
Query: 247 GGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIP 303
++ P + ++ D EA+R+L FP EVVGI+ +++ G G IHC++ ++PA P
Sbjct: 294 SVVLVPVYRCEQ-DAEALRILRGCFPDREVVGID-CSDLIWGLGAIHCVSHEEPADP 348
>gi|149279597|ref|ZP_01885726.1| possible peptidyl-arginyl deiminase [Pedobacter sp. BAL39]
gi|149229633|gb|EDM35023.1| possible peptidyl-arginyl deiminase [Pedobacter sp. BAL39]
Length = 353
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 168/363 (46%), Gaps = 80/363 (22%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNW--RDDALHAQRV-FAKVATAISKF 59
N +P GY PAEW H W+ WP + +W + + ++A F K+ K
Sbjct: 5 FNDSPRKAGYRFPAEWAKHEATWLSWP---HKEASWPGKIETIYAPYCEFIKIVAEGEKV 61
Query: 60 -----EPVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQA 114
+ T + A+ E A + L + I N +W RD GP ++N++ A
Sbjct: 62 RININDEETKVFAIAELEKAGADLSQ-IEFYMQPTNDAWCRDHGPAFLLNEA-------A 113
Query: 115 PKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEG 174
+ A +DW +N+WGG Y + LD + KI LP + +V+EGGS+ +G G
Sbjct: 114 DQKAVVDWGYNAWGG----KYPPFDLDDVIPTKIAERFNLPLYLPEIVMEGGSVEFNGAG 169
Query: 175 TCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG---------- 224
T LTT CLLN+NRNPHL K +IE L + G +++WL G+ G DG
Sbjct: 170 TILTTTACLLNENRNPHLKKEEIEQYLMEFYGAEQVLWLGDGIVGDDTDGHIDDITRFVN 229
Query: 225 --------EAKP-------------RLAGTR------------------------LAASY 239
E+ P L G R L ASY
Sbjct: 230 EDTVLTVVESNPLDENYILLQENLETLKGMRLLSGKPLNIIKLPMPSPVIHEDTRLPASY 289
Query: 240 VNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQ 299
NFYIAN +I P F D D +A++++ AFP +VVGI+ + +I+ G G+ HC++QQ+
Sbjct: 290 ANFYIANAAVIVPTFRDVN-DEKALKIIQDAFPDRKVVGID-STDIIWGLGSFHCLSQQE 347
Query: 300 PAI 302
PA+
Sbjct: 348 PAL 350
>gi|168013874|ref|XP_001759490.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689420|gb|EDQ75792.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 391
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/225 (42%), Positives = 129/225 (57%), Gaps = 15/225 (6%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N TP GY MP E+E H+ CWMGWP Y+ + WR++A AQ +A +A AIS+FEP+T
Sbjct: 9 NATPKELGYTMPGEFEKHAGCWMGWP--YDG-NLWRENAKPAQAQYAAIAKAISEFEPLT 65
Query: 64 VCASAAQ-WENARSQLPE--NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
+ A + E AR + N+ V+E+ + W RD GP+ V K +G + VAG+
Sbjct: 66 MFAHPGEPAEVAREYFEDAPNVTVVELEIEDGWTRDWGPSCVA-KDDPVTGKRI--VAGV 122
Query: 121 DWNFNSWGGVDD------GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEG 174
W+++ +GG+ W D R +L L F + LEGGSIH DGEG
Sbjct: 123 HWDYDCYGGLLKRKLGLPTMMPSWDKDYAAGRALLEMNGLEVFEAPIHLEGGSIHSDGEG 182
Query: 175 TCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
T + TEECLL+ +RNPHL K IE LK YLG+ KIIW RG+ G
Sbjct: 183 TLMCTEECLLHPSRNPHLGKEGIEKVLKDYLGLEKIIWFWRGIMG 227
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 57/77 (74%), Gaps = 4/77 (5%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGD--KKWDGEAVRVLSQAF-PKYEVVGIERARE 284
PR+AG RL ++Y+N Y ANGG++ PQFG + D +A+ ++ +A+ P Y+VVG+ +RE
Sbjct: 314 PRIAGERLPSTYINHYCANGGVVVPQFGGVAAEADKKALEIIQEAYGPDYKVVGVS-SRE 372
Query: 285 IVLGGGNIHCITQQQPA 301
+VL GNIHCITQQ PA
Sbjct: 373 VVLNAGNIHCITQQHPA 389
>gi|307706573|ref|ZP_07643380.1| agmatine deiminase [Streptococcus mitis SK321]
gi|307618028|gb|EFN97188.1| agmatine deiminase [Streptococcus mitis SK321]
Length = 361
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 121/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+ F+++ I++ E V
Sbjct: 1 MMNSPKKLGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKAAFSQIIKTIAEGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+ L +++ +++ N +W RDTGPTI+V++ +DW
Sbjct: 58 YLLVGQDYLAEAQDYLGDSVVYLDIPTNDAWARDTGPTILVDEKREK--------LAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P F VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGTYDGLYQDYEDDDQVASRFAEVLGMPVFDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHL+K +IEN L LG K+IWLP G++
Sbjct: 170 CLLSSGRNPHLSKEEIENTLLECLGAEKVIWLPYGIY 206
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF DK D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKSVLVPQFQDKN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|78066226|ref|YP_368995.1| peptidyl-arginine deiminase [Burkholderia sp. 383]
gi|77966971|gb|ABB08351.1| agmatine deiminase [Burkholderia sp. 383]
Length = 345
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 157/348 (45%), Gaps = 70/348 (20%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQ 70
GY MPAEWE W+GWPV ++R D W R FA VA I++++ V A +Q
Sbjct: 10 GYRMPAEWESMDATWLGWPVLHDREDLWGSHYAQVCREFALVARTIARYQRCVVAAHHSQ 69
Query: 71 WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
+ AR + ++ V+ ++ +W RD GP +V++ A + FN WG
Sbjct: 70 ADAARELVGASVDVVPVAAEDNWLRDCGPIFLVSEQHGLGAAV--------FRFNCWGEK 121
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
Y+ + Q + I F MVLEGGS +VDG+GT +TTE CLL+ NRNP
Sbjct: 122 ----YQPYDGCQQAGQDIARAAGAEIFNSHMVLEGGSFYVDGQGTLVTTESCLLHPNRNP 177
Query: 191 HLTKGQIENELKAYLGVMKIIWLP------------RGLFGMIHDG-------------- 224
HL++ +IE EL+ LGV KIIWLP G+ I G
Sbjct: 178 HLSRAEIEAELRRMLGVEKIIWLPGNPDEVETNGHVDGIASFIAPGRMLCQTALPEQGDY 237
Query: 225 -----------EAKPRLAGTRL---------------AASYVNFY----IANGGIITPQF 254
E AG R + Y + Y + NG +I F
Sbjct: 238 FHVMRENRRALELATDAAGRRFELLDLPSPIVTERFGSERYCDCYANYILVNGAVIVSAF 297
Query: 255 GDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
G ++ D A S+AFP V + + +GGG+IHC TQQQP++
Sbjct: 298 GVEQ-DQAAREAFSRAFPGRNVEMLP-IPTLSIGGGSIHCSTQQQPSV 343
>gi|407782047|ref|ZP_11129262.1| agmatine deiminase [Oceanibaculum indicum P24]
gi|407206520|gb|EKE76471.1| agmatine deiminase [Oceanibaculum indicum P24]
Length = 343
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/208 (44%), Positives = 114/208 (54%), Gaps = 16/208 (7%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+ MP EW PH +CWM WP RL W + A F VA AI++FEPV + A+
Sbjct: 5 FYMPGEWHPHRRCWMAWPAGT-RL--WGEKTGEAHAAFVAVARAIARFEPVRMLANPEDA 61
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
NAR L VIE S + SW RDTGP+ V++ + +AG DW FN WG
Sbjct: 62 PNARQLLDGVAEVIEASYDDSWLRDTGPSFVIDGTGG--------IAGTDWVFNGWGE-- 111
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ D +A IL E + R P +V EGG+IHVDGEGT L E +LN+NRNP
Sbjct: 112 ---RQPHERDAALAGWILDREGITRRPSPLVNEGGAIHVDGEGTLLAVETTILNQNRNPD 168
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGLFG 219
LT +IE EL A G K+IWLP GL G
Sbjct: 169 LTHVEIERELCAATGAEKVIWLPGGLDG 196
>gi|417935783|ref|ZP_12579100.1| agmatine deiminase [Streptococcus infantis X]
gi|343402692|gb|EGV15197.1| agmatine deiminase [Streptococcus infantis X]
Length = 361
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH + WP R +W A++ F+++ I++ E V
Sbjct: 1 MMDSPKKLGYRMPAEYEPHHGTLVIWPTR---PGSWPFQGKAAKQAFSQIIKTIAQGETV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L + + +++ N +W RDTGPTI++N +DW
Sbjct: 58 YLLVEQDYLTEAQSCLGDKVVYLDIQTNDAWARDTGPTILLNDKREK--------LAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEADDQVASRFAEALEMPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHLTK +IE L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPHLTKEEIEKTLLESLGAEKVIWLPYGIY 206
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN I+ PQF D D A+ +LSQ FP EV+GI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKSILVPQFQDVN-DQVALDILSQCFPDREVIGI-SARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|414155293|ref|ZP_11411605.1| agmatine deiminase [Streptococcus sp. F0442]
gi|410873266|gb|EKS21201.1| agmatine deiminase [Streptococcus sp. F0442]
Length = 361
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 121/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+ F+K+ I++ E V
Sbjct: 1 MMDSPKKLGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKAAFSKIIKTIAQGETV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L + + +++ N +W RDTGPTI++N Q K+A +DW
Sbjct: 58 YLLVEEDYLSEAQSYLGDQVVYLDIPTNDAWARDTGPTILLND-------QREKLA-VDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEADDQVASRFAEELEIPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP LTK +IE L LG K+IW P G++
Sbjct: 170 CLLSPGRNPQLTKEEIEKTLLESLGAEKVIWFPYGIY 206
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D+ D A+ +LSQ FP EVVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKSVLVPQFRDEN-DQVALDILSQCFPDREVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|448928099|gb|AGE51671.1| agmatine deiminase [Paramecium bursaria Chlorella virus CviKI]
Length = 359
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 118/214 (55%), Gaps = 14/214 (6%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E H + WM +P R DNWR +A+ AQ++ +A IS+FE V +
Sbjct: 2 TPKQTGFYMPGEFEQHKRTWMIFPFRN---DNWRQEAVPAQKIITNLARKISEFEEVIMI 58
Query: 66 ASAAQWENARSQLPEN-IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
S A L ++ ++++ + W RDTG T + N V I W+F
Sbjct: 59 VSRDHLNKAMELLHDSSVKMVTADSDDCWARDTGATFITN---------GKNVKAISWDF 109
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTEECL 183
NSWGG DG Y W D ++A + +P VLEGGSIHVDGEGT +TT+ECL
Sbjct: 110 NSWGGNFDGLYTTWKNDQKIAEYMARISNVPIIKTPGFVLEGGSIHVDGEGTLITTKECL 169
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
L+ RNP +++ IE LK YL V KIIWL G+
Sbjct: 170 LSAGRNPTMSQQDIEYYLKEYLNVEKIIWLEYGV 203
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 76/124 (61%), Gaps = 11/124 (8%)
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF-------GMIHDGEAKPRLAGTRLAA 237
+KN LT+ E + K + I +P +F G+++ G A PR AG RLAA
Sbjct: 240 SKNAYKLLTR---ERDAKGRKLTIHKIHIPSDMFITEEEAAGVVNTGLAVPRRAGDRLAA 296
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SYVNF + NG II P FGD+K+D A + + FP+ E++G +REI+LGGGN+HC+TQ
Sbjct: 297 SYVNFVMPNGAIIFPTFGDEKYDALAHKKFEEIFPEREIIGF-YSREILLGGGNLHCVTQ 355
Query: 298 QQPA 301
QQP
Sbjct: 356 QQPV 359
>gi|139438400|ref|ZP_01771916.1| Hypothetical protein COLAER_00906 [Collinsella aerofaciens ATCC
25986]
gi|133775939|gb|EBA39759.1| agmatine deiminase [Collinsella aerofaciens ATCC 25986]
Length = 401
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 127/244 (52%), Gaps = 39/244 (15%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
E TP G+ MPAE+ P + WMGWP R D W A AQ+ +A +A AI++F P
Sbjct: 6 ESESTPKADGFFMPAEFAPQDRVWMGWP---HRTDTWAHGAKPAQKQYAAIARAIAEFTP 62
Query: 62 VTVCASAAQWENARS--QLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
VT+CA+ A + N ++ + EN+ VIEM+ + +WFRDT T V+N
Sbjct: 63 VTMCANQADYANCKAVFEEDENVTVIEMTTDDAWFRDTAATFVINGKGDKRANH------ 116
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLT 178
W+FN++GG+ DG Y W D Q+A K+ R+ P M+LEGGSI VDGEGT +
Sbjct: 117 --WHFNAYGGLVDGLYFPWDKDEQIALKMAELSGCRRYRPDDMILEGGSITVDGEGTVVV 174
Query: 179 TEECLLNKNRN---------------PHLT----------KGQIENELKAYLGVMKIIWL 213
T++CLL+ R P + ++ LK YLGV K+IW+
Sbjct: 175 TDQCLLSPGRTCSAVLEEEEDPESIWPKFKRKFEPWSEELRAYMDEHLKDYLGVEKVIWV 234
Query: 214 PRGL 217
G+
Sbjct: 235 KEGI 238
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 8/85 (9%)
Query: 223 DGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPK------YEV 276
D A+PR+ L ASY+N+ + N G+I PQ+GD+ D AV L + + + Y+
Sbjct: 318 DENAEPRVVNEPLIASYMNYLVTNHGVIVPQYGDEN-DQLAVDTLQKIYDEVWGEGVYKC 376
Query: 277 VGIERAREIVLGGGNIHCITQQQPA 301
VG++ + ++V GGGNIHCITQQ+P+
Sbjct: 377 VGVQ-SEQVVFGGGNIHCITQQEPS 400
>gi|418531973|ref|ZP_13097882.1| peptidyl-arginine deiminase [Comamonas testosteroni ATCC 11996]
gi|371450768|gb|EHN63811.1| peptidyl-arginine deiminase [Comamonas testosteroni ATCC 11996]
Length = 365
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 159/360 (44%), Gaps = 79/360 (21%)
Query: 3 MNGTPALHG--YLMPAEWEPHSQCWMGWPVRYERLDNW-RDDALHAQRVFAKVATAISKF 59
M+G PA + MP E E HS WM + D W + AQ A++A AI+
Sbjct: 24 MHGLPAQAAGSWRMPDEGERHSATWMAFGAND---DVWGKRLKSGAQANLARIAQAIASV 80
Query: 60 EPVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
EPV + + ++ A ++++ ++ W RDTGP V A +AG
Sbjct: 81 EPVHMLVNEEDYDLAARLCGNKVKLVVQPIDDFWMRDTGPVFVKGAGGA--------LAG 132
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTT 179
+ +NFN WG D Y D D VA + +P S+VLEGG I VDG GT + T
Sbjct: 133 VSFNFNGWGEKQD--YED---DALVASFVAGRAGVPVIESSLVLEGGGIEVDGRGTAIIT 187
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGM-IHDGE------------- 225
E C+LN NRNP ++K Q E EL LG+ K+IWLP G+ G I DG
Sbjct: 188 ESCVLNVNRNPGVSKAQCEKELHRVLGIEKVIWLP-GIAGQDITDGHTDFYARFCAPGMV 246
Query: 226 --------AKPRLAGTR------------------------------------LAASYVN 241
+ P A TR AA Y+N
Sbjct: 247 VAGFESDSSSPEHAVTRRHLEILRKATDARGLPLKVVTLPGPDHVRPQYENKDFAAGYIN 306
Query: 242 FYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
FY+ NG ++ P+FG + D +L + FP ++V + I GGG IHC TQQQPA
Sbjct: 307 FYVCNGAVLCPEFGHVQADRNTKAILREQFPGRDIVQLN-IDAIAAGGGGIHCTTQQQPA 365
>gi|383807552|ref|ZP_09963112.1| hypothetical protein IMCC13023_10740 [Candidatus Aquiluna sp.
IMCC13023]
gi|383298906|gb|EIC91521.1| hypothetical protein IMCC13023_10740 [Candidatus Aquiluna sp.
IMCC13023]
Length = 335
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 157/342 (45%), Gaps = 66/342 (19%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
Y+MP EW+ H + W+ +P L D+ A++ +A VA S FE VT
Sbjct: 3 YVMPPEWDQHERTWIAFPHDGYTLGETPDEQYAARKTWANVANTASNFEKVTAIVHPKDL 62
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
A+ L + + ++ ++ +W RD+GPT V N +A ++A ++W FN WG
Sbjct: 63 AMAKKFLSRQVEIFDLVIDDAWVRDSGPTFVKN--------EAGELACVNWVFNGWGAQS 114
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ + D ++A +I PR MV EGG IHV+G+G L TE L+ RNP+
Sbjct: 115 WASFEN---DSKIATEIAGFLGAPRVDSEMVNEGGGIHVNGQGQVLLTETVQLDPGRNPN 171
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIHDGE--- 225
TK Q+E EL +GV +WL +GL FG + HD +
Sbjct: 172 WTKEQVEEELSRTIGVSDFVWLKQGLTRDYDEFGTRGHVDIVACYLPDQRVLFHDQKNQN 231
Query: 226 ---------AKPRLAGTRLAA------------------SYVNFYIANGGIITPQFGDKK 258
K +L LA SYVN Y+ N ++ F D+
Sbjct: 232 HPDFPVSEAVKQQLVDAELAPVSLPAPTTLRDDEGFVDYSYVNHYVMNDAVLLGSFEDQN 291
Query: 259 WDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
D EA +L + +P EVV I+ ARE+ GG IHCITQQ+P
Sbjct: 292 -DKEAQAILRECYPDREVVLID-ARELFARGGGIHCITQQEP 331
>gi|110597749|ref|ZP_01386033.1| Porphyromonas-type peptidyl-arginine deiminase [Chlorobium
ferrooxidans DSM 13031]
gi|110340656|gb|EAT59136.1| Porphyromonas-type peptidyl-arginine deiminase [Chlorobium
ferrooxidans DSM 13031]
Length = 349
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 158/358 (44%), Gaps = 79/358 (22%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
Y MP EW H W+ WP RL++W VF ++A+ +S E V +
Sbjct: 6 YYMPPEWAFHKATWLSWP---HRLESWPGKFEPVPAVFVEIASWLSSSEEVHINVLDEAM 62
Query: 72 ENARSQLPENIRVIEMSM----------NGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
E +L N R ++ + N +W RD GP V +S G + KV +D
Sbjct: 63 EREVLELLRNSRHEQLRLDRVFLHRIPTNDAWCRDHGPNFVFRES----GFRTEKVI-LD 117
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
W +N+WGG Y + D V +I E+LP +VLEGGSI V+G+G LTTE
Sbjct: 118 WEYNAWGGK----YEPYDDDNAVPERIAFQEQLPLVSTGIVLEGGSIDVNGKGLLLTTEA 173
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEA--------------- 226
CLLN NRNP +++ IE EL YLG+ K++WL G+ G DG
Sbjct: 174 CLLNPNRNPLMSRADIERELGNYLGIQKVLWLGDGIAGDDTDGHVDDMARFVNENTVVIA 233
Query: 227 ----------KPRLAGTRLAAS------------------------------YVNFYIAN 246
+P RL S Y NFYIAN
Sbjct: 234 VEDDPADLNYEPLQENYRLLQSFTDIEGNPLQVVKLPMPSPVFFDGERLPASYANFYIAN 293
Query: 247 GGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIPT 304
++ P + + D A+ +L FP VVGI+ ++V G G IHCIT ++PA+P
Sbjct: 294 SVVLVPTYRCSR-DASAIELLQNCFPGRRVVGID-CFDLVWGLGAIHCITHEEPALPV 349
>gi|417848678|ref|ZP_12494611.1| agmatine deiminase [Streptococcus mitis SK1080]
gi|339457747|gb|EGP70311.1| agmatine deiminase [Streptococcus mitis SK1080]
Length = 361
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 120/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A+ F+++ +I++ E V
Sbjct: 1 MMDSPKKLGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKSAFSQIIKSIAEGEKV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+ L +++ +++ N +W RDTGPTI+VN +DW
Sbjct: 58 YLLVEQDYLAEAQDYLGDSVVYLDIPTNDAWARDTGPTILVNDKREK--------LAVDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGSVDGLYQDYEDDDQVASRFAEALEMPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHL+K +IE L LG K+IWLP G++
Sbjct: 170 CLLSSGRNPHLSKEEIETTLLECLGAEKVIWLPYGIY 206
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGI-AARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|404421492|ref|ZP_11003208.1| agmatine deiminase [Mycobacterium fortuitum subsp. fortuitum DSM
46621]
gi|403658895|gb|EJZ13586.1| agmatine deiminase [Mycobacterium fortuitum subsp. fortuitum DSM
46621]
Length = 340
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 159/343 (46%), Gaps = 67/343 (19%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALH-AQRVFAKVATAISKFEPVTVCASAAQ 70
YLMPAE P + WM +P L + D A H A+ +A VA A+++FEPVT+ A+
Sbjct: 4 YLMPAEGAPQDRVWMAFPCEGYSLGD-TDQARHEARSTWAAVAHAVAQFEPVTMLVDPAE 62
Query: 71 WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
A+ + + I +IE +N +W RD GPT V A G+ VA +DW FN WG
Sbjct: 63 LAVAKRYISQGIELIEAPLNDAWMRDIGPTFV----HADDGS----VAAVDWTFNGWGAQ 114
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
D + W D ++ + + P ++V EGG I DG GT L TE L+ +RNP
Sbjct: 115 D---WARWDRDAEIGAMVGELAGVTVVPSALVNEGGGIQTDGHGTVLVTETVQLDPHRNP 171
Query: 191 HLTKGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIH----- 222
TK +E EL +G ++WLP GL +G ++H
Sbjct: 172 GATKVGVEAELARTIGATDVVWLPYGLTRDSQRYGTRGHVDIVAAMPAPGRLLLHTQRDE 231
Query: 223 -------------------DGEAKPRLAGTRLAASYVNF-----YIANGGIITPQFGDKK 258
D P A A YV++ + NGG+I F D
Sbjct: 232 SHPDSLVCKGIRSVVDGAFDIVEMPAPATLTDADGYVDYSYINHLVVNGGVIACAFDDPH 291
Query: 259 WDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
D +A +L++ +P EVV ++ AR + GG IHCITQQQP+
Sbjct: 292 -DADARAILAEQYPGREVVAVD-ARPLFERGGGIHCITQQQPS 332
>gi|385261958|ref|ZP_10040073.1| agmatine deiminase [Streptococcus sp. SK643]
gi|385191699|gb|EIF39111.1| agmatine deiminase [Streptococcus sp. SK643]
Length = 361
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 125/217 (57%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W A++ F+++ I++ E V
Sbjct: 1 MMNSPKKLGYRMPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKKAFSQIIKTIAEGETV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+ L +++ +++ N +W RDTGPTI++N + K+A ++W
Sbjct: 58 YLLVEQDYLSEAQDYLGDSVVYLDIPTNDAWARDTGPTILLND-------KGQKLA-VNW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGTYDGLYQDYEADDQVATRFAEALEIPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPNLTKEEIENTLLDSLGAEKVIWLPYGIY 206
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF DK D A+ +LS+ FP +V+GI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKSVLVPQFQDKN-DQVALDILSKCFPDRKVIGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|52353975|ref|NP_048994.2| Agmatine iminohydrolase [Paramecium bursaria Chlorella virus 1]
gi|52221433|gb|AAC96965.2| Agmatine iminohydrolase [Paramecium bursaria Chlorella virus 1]
Length = 359
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 117/214 (54%), Gaps = 14/214 (6%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E H + WM +P R DNWR +A+ AQ+ +A IS+FE V +
Sbjct: 2 TPKQTGFYMPGEFEQHKRTWMIFPFRN---DNWRQEAVPAQKTITNLARKISEFEEVIMI 58
Query: 66 ASAAQWENARSQLPEN-IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
S A L ++ ++++ + W RDTG T + N V I W+F
Sbjct: 59 VSRDHLNKAMDLLHDSGVKMVTADSDDCWARDTGATFITN---------GKNVKAISWDF 109
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTEECL 183
NSWGG DG Y W D ++A + +P VLEGGSIHVDGEGT +TT+ECL
Sbjct: 110 NSWGGNFDGLYTTWKNDQKIAEYMARISNIPIIKTPGFVLEGGSIHVDGEGTLITTKECL 169
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
L+ RNP +++ IE LK YL V KIIWL G+
Sbjct: 170 LSTGRNPTMSQQDIEYYLKEYLNVEKIIWLEYGV 203
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 77/124 (62%), Gaps = 11/124 (8%)
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF-------GMIHDGEAKPRLAGTRLAA 237
+KN LTK E + K ++ I +P +F G+++ G A PR AG RLAA
Sbjct: 240 SKNAYKLLTK---ERDAKGRKLIIHKIHIPSDMFITEEEATGVVNSGLAVPRRAGDRLAA 296
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SYVNF + NG II P FGD+K+D A + + FP+ E+VG +REI+LGGGN+HCITQ
Sbjct: 297 SYVNFVMPNGAIIFPTFGDEKYDALAHKKFEEIFPEREIVGF-YSREILLGGGNLHCITQ 355
Query: 298 QQPA 301
QQP
Sbjct: 356 QQPV 359
>gi|284006527|emb|CBA71788.1| agmatine deiminase [Arsenophonus nasoniae]
Length = 335
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 162/350 (46%), Gaps = 73/350 (20%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHA-QRVFAKVATAISKFEPVTVCASAAQ 70
Y P E + H+ WM + + W + + Q+ A +A AI++FEPV + +
Sbjct: 2 YYFPHESQAHTCTWMAFGMSATI---WPKHLIASLQQNLADIALAIAQFEPVNLLVTPEN 58
Query: 71 WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
+ A + L ++ +E+ +N W RD+G V++KSS ++ ID+NFN WG
Sbjct: 59 YPVAWNLLGSSVNYVEVPLNDIWIRDSGANFVLDKSSG-------QLVAIDFNFNGWGN- 110
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
+ + D VA+ + ++ +EGGSI V+G G + TE +LN RNP
Sbjct: 111 ----KQRHNFDRHVAKIMADYTNSQLIKANINIEGGSIEVNGSGVGIFTESSILNSARNP 166
Query: 191 HLTKGQIENELKAYLGVMKIIWLPRGLFGM-IHDG------------------------- 224
+ T+ QIE +LK YLG+ +IIWL +G+ G I DG
Sbjct: 167 NCTRQQIEEKLKTYLGLTEIIWL-KGIKGYDITDGYIDFYARFIDDNGIIISLENDTYSF 225
Query: 225 ------EAKPRLAGT-----------------------RLAASYVNFYIANGGIITPQFG 255
E + RL AASYVN+Y+ +I P+FG
Sbjct: 226 DYRVTREHQDRLIAMNKIKNITILNTPQNVRVNRQRYPEFAASYVNYYLCQQAVIMPEFG 285
Query: 256 DKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIPTN 305
D+K D A+ +L+ FPK +V + I +GGG IHC+TQQQP N
Sbjct: 286 DQKADKAAIEILTDCFPKRNIVSV-NIDTIAIGGGGIHCVTQQQPKTAIN 334
>gi|406947382|gb|EKD78316.1| hypothetical protein ACD_41C00369G0005 [uncultured bacterium]
Length = 346
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 153/362 (42%), Gaps = 79/362 (21%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
MN TP GY MPAEWEPH+ W+ WP + A+ FA ISK E +
Sbjct: 1 MNETPKQLGYHMPAEWEPHTAIWLAWPHDPDSFPQLE----QAEWAFADFVAVISKTEHI 56
Query: 63 TVCASAAQWENARSQLPEN-------IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAP 115
+ E L + IR + W RD GP VVN ++
Sbjct: 57 ELHVLNDVMEQKVMSLLQQRQCHLSAIRFHHTNYADIWIRDYGPIFVVNPTTK------- 109
Query: 116 KVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGT 175
++A W +N++G Y + D V + + +LP F +VLEGGS+ V+G GT
Sbjct: 110 QLAMTKWEYNAYGN----KYTELLKDNDVPYIMNQSLQLPMFKTGIVLEGGSVDVNGLGT 165
Query: 176 CLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG----------- 224
LTT +CLLN NRNP L++ QIE+ L YLGV +IWL G+ G DG
Sbjct: 166 LLTTRQCLLNANRNPRLSEQQIESYLSDYLGVQHVIWLNEGIEGDDTDGHIDDIARFINP 225
Query: 225 --------------EAKPRLAGTRLAASYV------------------------------ 240
+ KP +L V
Sbjct: 226 TTVVCVYTDDTSLVDYKPLHENYQLLTQAVDQAGQPLTIIKLPMPAVPKAGSRQLPASYT 285
Query: 241 NFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
NFYI NG +I P FG D + L FP +V+G+ A IV G G HC++QQQP
Sbjct: 286 NFYIGNGVVIVPTFGTNN-DQTVLERLRPLFPGRQVIGL-NAYHIVFGAGTFHCMSQQQP 343
Query: 301 AI 302
A+
Sbjct: 344 AV 345
>gi|325109428|ref|YP_004270496.1| agmatine deiminase [Planctomyces brasiliensis DSM 5305]
gi|324969696|gb|ADY60474.1| agmatine deiminase [Planctomyces brasiliensis DSM 5305]
Length = 350
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 160/362 (44%), Gaps = 80/362 (22%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M TP GY AEWEPHS W+ WP D+W VFA+ A ++++FE
Sbjct: 1 MADQHTPKQLGYRWAAEWEPHSATWLSWP---HNRDSWPGKFEPVPAVFAQFAKSVAQFE 57
Query: 61 PVTVCASAAQWENARSQL--PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVA 118
PV + A ++ A + +NI + ++ N W RD GP + + + A
Sbjct: 58 PVHILAEGPAYDQAAGLVGDVDNITLHRVATNDCWIRDHGPWFLEHPERPA--------A 109
Query: 119 GIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLT 178
+DW +N+WGG Y + D QV KI + + RF +V+EGGS+ +G GT L
Sbjct: 110 LVDWQYNAWGGK----YPPFDADNQVPGKIAAELDMVRFEPGLVMEGGSVENNGNGTLLV 165
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWL------------------------- 213
T +CLLN NRNP + + QI + L Y ++WL
Sbjct: 166 TAQCLLNPNRNPAMKREQIADALCEYANANTVLWLFSPEDGSIPGDDTDAHIDQLARFTT 225
Query: 214 -----------------PRGLFGMIH-------DGEAKP------------RLAGTRLAA 237
P L +H D + KP G +L A
Sbjct: 226 AGTILASANSDSKTGPDPVPLLDAMHQQLRKFKDSQGKPFSIVPLPIPDPVYYDGHQLPA 285
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY NFY+ NG +I PQF + D +A+ +L + FP +++GI+ A ++V G G HC +
Sbjct: 286 SYANFYVGNGFVIAPQFRCSR-DADAMAILQEQFPDRQIIGID-AVDLVWGLGAFHCASM 343
Query: 298 QQ 299
QQ
Sbjct: 344 QQ 345
>gi|448929118|gb|AGE52687.1| agmatine deiminase [Paramecium bursaria Chlorella virus CvsA1]
Length = 387
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 118/214 (55%), Gaps = 14/214 (6%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E H++ WM +P R DNWR +A+ AQ+ +A IS+FE V +
Sbjct: 30 TPKSDGFYMPGEFEEHARTWMIFPFRN---DNWRQEAVPAQKTITNLARKISEFEEVIMI 86
Query: 66 ASAAQWENARSQLPEN-IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
S A L ++ ++++ + W RDTG T + N V I W+F
Sbjct: 87 VSRDHLNKAMELLHDSSVKMVTADSDDCWARDTGATFITN---------GKIVKAISWDF 137
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTEECL 183
NSWGG DG Y W D ++A + +P VLEGGSIHVDGEGT +TT+ECL
Sbjct: 138 NSWGGNFDGLYTTWKNDQKIAEYMARISNVPIIKTPGFVLEGGSIHVDGEGTLITTKECL 197
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
L+ RNP +++ IE LK YL V KIIWL G+
Sbjct: 198 LSAGRNPTMSQQDIEYYLKEYLNVEKIIWLEYGV 231
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 76/124 (61%), Gaps = 11/124 (8%)
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF-------GMIHDGEAKPRLAGTRLAA 237
+KN LT+ E + K + I +P +F G+++ G A PR AG RLAA
Sbjct: 268 SKNAYKLLTR---ERDAKGRKLTIHKIHIPSDMFITKEEAAGVVNTGLAIPRRAGDRLAA 324
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SYVNF + NG II P FGD+K+D A + + FP+ E+VG +REI+LGGGN+HC+TQ
Sbjct: 325 SYVNFVMPNGAIIFPTFGDEKYDALAHKKFEEIFPEREIVGF-YSREILLGGGNLHCVTQ 383
Query: 298 QQPA 301
QQP
Sbjct: 384 QQPV 387
>gi|451981849|ref|ZP_21930188.1| Agmatine deiminase [Nitrospina gracilis 3/211]
gi|451760918|emb|CCQ91453.1| Agmatine deiminase [Nitrospina gracilis 3/211]
Length = 353
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 161/359 (44%), Gaps = 78/359 (21%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRD-DALHAQRVFAKVATAISKFEPVTV 64
TP G+ MPAEWEPH+ W+ WP E W D + V+ ++ +A+ + E V V
Sbjct: 7 TPTQSGFRMPAEWEPHAATWLTWPHNPE---TWPGLDLRPIEDVYLQMISALIEGETVHV 63
Query: 65 CASAAQ---WENARSQ----LPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKV 117
+ + R + L +++++ + N SW RD GP ++ +++ V
Sbjct: 64 LVKDPENRIYVEKRMKEHHVLGKDVQIHCLPTNDSWIRDYGPNFLIRENNGLR-----DV 118
Query: 118 AGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCL 177
A W FNSWGG +W LD + I +P F +VLEGG+I V+G GTCL
Sbjct: 119 AANVWKFNSWGG-----KYEWELDDRAGLDITRRLGIPIFEPGLVLEGGAIEVNGRGTCL 173
Query: 178 TTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG------------- 224
TT CLL++NRN +T+ ++E LK YLG ++W L G DG
Sbjct: 174 TTRRCLLDENRNAGMTQKEMERYLKEYLGASHVLWFEGDLEGDDTDGHIDNLVRFVNETT 233
Query: 225 -----------------------------------EAKP-------RLAGTRLAASYVNF 242
EA P G RL AS+ NF
Sbjct: 234 VVYAYDDSPEDPNHTCLTANHETLQTATDQDGKRLEAIPLPMPRRIEFGGDRLPASHANF 293
Query: 243 YIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
YI N ++ P FG D +A +L FP +VV I + VLG G IHC+TQQQPA
Sbjct: 294 YIGNRSVLLPVFGGSS-DKKAQGILKDLFPDRKVVPI-VCSQFVLGLGAIHCVTQQQPA 350
>gi|335029970|ref|ZP_08523471.1| agmatine deiminase [Streptococcus infantis SK1076]
gi|334267835|gb|EGL86288.1| agmatine deiminase [Streptococcus infantis SK1076]
Length = 361
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 121/217 (55%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+E H M WP R +W A+ F+++ I++ E V
Sbjct: 1 MMDSPKKLGYRMPAEYESHHGTLMIWPTR---PGSWPFQGKAAKTAFSQIIKTIAQGETV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+S L + + +++ N +W RDTGPTI++N K+A +DW
Sbjct: 58 YLLVEEYYLSEAQSYLGDQVVYLDIPTNDAWARDTGPTILLNDKRE-------KLA-VDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA +P + VLEGGSIH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEADDQVAPSFARELNIPVYSAKPFVLEGGSIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPH+TK +IEN L LG K+IWLP G++
Sbjct: 170 CLLSPGRNPHMTKEEIENTLLESLGAEKVIWLPYGIY 206
>gi|448931172|gb|AGE54735.1| agmatine deiminase [Paramecium bursaria Chlorella virus KS1B]
Length = 359
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 118/214 (55%), Gaps = 14/214 (6%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E H + WM +P R DNWR +A+ AQ+ +A IS+FE V +
Sbjct: 2 TPKQTGFYMPGEFEQHKRTWMIFPFRN---DNWRQEAVPAQKTITNLARKISEFEEVIII 58
Query: 66 ASAAQWENARSQLPEN-IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
S A L ++ ++++ + W RDTG T + N + V I W+F
Sbjct: 59 VSRDHLNKAMELLHDSSVKMVTADSDDCWARDTGATFITNGNI---------VKAISWDF 109
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTEECL 183
NSWGG DG Y W D ++A + +P VLEGGSIHVDGEGT +TT+ECL
Sbjct: 110 NSWGGNFDGLYTTWKNDQKIAEYMARISNVPIIKTPGFVLEGGSIHVDGEGTLITTKECL 169
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
L+ RNP +++ IE LK YL V KIIWL G+
Sbjct: 170 LSAGRNPTMSQQDIEYYLKEYLNVEKIIWLEYGV 203
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 76/124 (61%), Gaps = 11/124 (8%)
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF-------GMIHDGEAKPRLAGTRLAA 237
+KN LT+ E + K + I +P +F G+++ G A PR AG RLAA
Sbjct: 240 SKNAYKLLTR---ERDAKGRKLTIHKIHIPSDMFITKEEAAGVVNTGLAIPRRAGDRLAA 296
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SYVNF + NG II P FGD+K+D A + + FP+ E+VG +REI+LGGGN+HC+TQ
Sbjct: 297 SYVNFVMPNGAIIFPTFGDEKYDALAHKKFEEIFPEREIVGF-YSREILLGGGNLHCVTQ 355
Query: 298 QQPA 301
QQP
Sbjct: 356 QQPV 359
>gi|29829256|ref|NP_823890.1| agmatine deiminase [Streptomyces avermitilis MA-4680]
gi|73622174|sp|Q82JP0.1|AGUA_STRAW RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|29606363|dbj|BAC70425.1| putative agmatine deiminase [Streptomyces avermitilis MA-4680]
Length = 346
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 112/214 (52%), Gaps = 12/214 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TPA G+ MPAEW PH + WM WP D+ DD + R +A VA AI +FEPVTV
Sbjct: 3 TPAADGFRMPAEWTPHERTWMAWPGPNPTFDH-PDDLAESCRAWADVARAIRRFEPVTVV 61
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
+ AR L I +E ++ +W RD GPT + + +A +DW FN
Sbjct: 62 CGPGRSAEARDLLGPGIDTVERDLDDAWMRDIGPTFLTDGKGG--------LAAVDWTFN 113
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
WG + W D ++A + + +V EGG+IHVDGEGT L TE L
Sbjct: 114 GWGAQ---SWARWEHDAKIAAYVGDLAGAKTYASKLVNEGGAIHVDGEGTVLLTETVQLG 170
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
RNP T+ Q+E E+ A+LG K IWLPRGL G
Sbjct: 171 AERNPGWTREQVETEIHAHLGTSKAIWLPRGLTG 204
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ NGG++ F D + D A + + FP+ V ++ AR I GGG IHCITQ
Sbjct: 284 SYINHYLCNGGVVLCGFDDPR-DETAAGIFRRLFPERTVTLVD-ARTIFSGGGGIHCITQ 341
Query: 298 QQP 300
QQP
Sbjct: 342 QQP 344
>gi|419530193|ref|ZP_14069723.1| agmatine deiminase [Streptococcus pneumoniae GA40028]
gi|421217440|ref|ZP_15674341.1| agmatine deiminase [Streptococcus pneumoniae 2070335]
gi|421270615|ref|ZP_15721471.1| agmatine deiminase [Streptococcus pneumoniae SPAR48]
gi|379574192|gb|EHZ39136.1| agmatine deiminase [Streptococcus pneumoniae GA40028]
gi|395584926|gb|EJG45318.1| agmatine deiminase [Streptococcus pneumoniae 2070335]
gi|395868410|gb|EJG79528.1| agmatine deiminase [Streptococcus pneumoniae SPAR48]
Length = 350
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 115/206 (55%), Gaps = 12/206 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAE+EPH M WP R +W A+R F ++ I++ E V + A
Sbjct: 1 MPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIETIAEGERVYLLVEQAYLSE 57
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
A+S L + + +++ N +W RDTGPTI+VN K +DW FN+WGG DG
Sbjct: 58 AQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDWAFNAWGGTYDG 109
Query: 134 CYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
Y+D+ D QVA + P + VLEGG+IH DG+GT L TE CLL+ RNP+L
Sbjct: 110 LYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPGRNPNL 169
Query: 193 TKGQIENELKAYLGVMKIIWLPRGLF 218
TK +IEN L LG K+IWLP G++
Sbjct: 170 TKEEIENTLLESLGAEKVIWLPYGIY 195
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 88/170 (51%), Gaps = 20/170 (11%)
Query: 149 LSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIENEL---- 201
L E++ P+ + + + HVD + E +L + +P + + EL
Sbjct: 182 LGAEKVIWLPYGIYQDETNEHVDNVAAFVGPAELVLAWTDDENDPQYAMSKADLELLEQE 241
Query: 202 -----------KAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGII 250
K + ++ + L G I++ + R AG RLAASYVNFYIAN ++
Sbjct: 242 TDAKGCHFTIHKLPIPAVRQVVTEEDLPGYIYEEGEEKRYAGERLAASYVNFYIANKAVL 301
Query: 251 TPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIHCITQQ P
Sbjct: 302 VPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIHCITQQIP 349
>gi|404330271|ref|ZP_10970719.1| agmatine deiminase [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 365
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/219 (43%), Positives = 123/219 (56%), Gaps = 19/219 (8%)
Query: 9 LHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA-- 66
+ G MPAEWE H + + +PVR + +DA +A +A AIS+FEPVTV
Sbjct: 20 IRGLHMPAEWEKHERTLIAFPVRETMC--YPEDAARVCAGYAALAHAISEFEPVTVITRP 77
Query: 67 -SAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A N I ++ + N SW RD GPT +V+ AGI+W+FN
Sbjct: 78 GEAVPILNTSGN--PMIDLLPLPHNDSWIRDNGPTFLVDGQGHR--------AGINWHFN 127
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
+WG Y DW+LD ++A +L + PR +VLEGGSIH DG GT LTTE+CLL+
Sbjct: 128 AWGEK----YPDWALDDRLAPLLLDHFQTPRIDAPLVLEGGSIHADGAGTLLTTEQCLLS 183
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
NRNP L++ QIE ELK LG+ IIWL RGL G DG
Sbjct: 184 PNRNPRLSRAQIEAELKRLLGIRTIIWLNRGLAGDETDG 222
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 232 GTRLAASYVNFYIANGGIITPQFGDK--KWDGEAVRVLSQAFPKYEVVGIERAREIVLGG 289
G RL SY+NFY+ NGG+I P FG D AV + QAF V I+ ++ G
Sbjct: 285 GKRLTLSYLNFYLVNGGVILPVFGGDAAATDKAAVERIGQAFAGRRVRTID-GTAVITEG 343
Query: 290 GNIHCITQQQPAI 302
GN+HC TQQ PAI
Sbjct: 344 GNVHCATQQIPAI 356
>gi|448931543|gb|AGE55105.1| agmatine deiminase [Paramecium bursaria Chlorella virus MA-1D]
Length = 359
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 117/214 (54%), Gaps = 14/214 (6%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E H + WM +P R DNWR +A+ AQ+ +A IS+FE V +
Sbjct: 2 TPKQTGFYMPGEFEQHKRTWMIFPFRN---DNWRQEAVPAQQTITNLARKISEFEEVIMI 58
Query: 66 ASAAQWENARSQLPEN-IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
S A L ++ ++++ + W RDTG T + N V I W+F
Sbjct: 59 VSRDHLNKAMELLHDSSVKMVTADSDDCWARDTGATFITN---------GKNVKAISWDF 109
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTEECL 183
NSWGG DG Y W D ++A + +P VLEGGSIHVDGEGT +TT+ECL
Sbjct: 110 NSWGGNFDGLYTTWKNDQKIAEYMARISNVPIIKTPGFVLEGGSIHVDGEGTLITTKECL 169
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
L+ RNP +++ IE LK YL V KIIWL G+
Sbjct: 170 LSAGRNPTMSQQDIEYYLKEYLNVEKIIWLEYGV 203
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 76/124 (61%), Gaps = 11/124 (8%)
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF-------GMIHDGEAKPRLAGTRLAA 237
+KN LT+ E + K + I +P +F G+++ G A PR AG RLAA
Sbjct: 240 SKNAYKLLTR---ERDAKGRKLTVHKIHIPSDMFITEEEAAGVVNTGLAVPRRAGDRLAA 296
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SYVNF + NG II P FGD+K+D A + + FP+ E+VG +REI+LGGGN+HCITQ
Sbjct: 297 SYVNFVMPNGAIIFPTFGDEKYDALAHKKFEEIFPEREIVGF-YSREILLGGGNLHCITQ 355
Query: 298 QQPA 301
QQP
Sbjct: 356 QQPV 359
>gi|157953949|ref|YP_001498840.1| hypothetical protein AR158_C759R [Paramecium bursaria Chlorella
virus AR158]
gi|156068597|gb|ABU44304.1| hypothetical protein AR158_C759R [Paramecium bursaria Chlorella
virus AR158]
Length = 359
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 117/214 (54%), Gaps = 14/214 (6%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E H + WM +P R DNWR +A+ AQ+ +A IS+FE V +
Sbjct: 2 TPKQTGFYMPGEFEQHKRTWMIFPFRN---DNWRQEAVPAQQTITNLARKISEFEEVIMI 58
Query: 66 ASAAQWENARSQLPEN-IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
S A L ++ ++++ + W RDTG T + N V I W+F
Sbjct: 59 VSRDHLNKAMELLHDSSVKMVTADSDDCWARDTGATFITN---------GKNVKAISWDF 109
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTEECL 183
NSWGG DG Y W D ++A + +P VLEGGSIHVDGEGT +TT+ECL
Sbjct: 110 NSWGGNFDGLYTTWKNDQKIAEYMARISNVPIIKTPGFVLEGGSIHVDGEGTLITTKECL 169
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
L+ RNP +++ IE LK YL V KIIWL G+
Sbjct: 170 LSAGRNPTMSQQDIEYYLKEYLNVEKIIWLEYGV 203
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 76/124 (61%), Gaps = 11/124 (8%)
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF-------GMIHDGEAKPRLAGTRLAA 237
+KN LT+ E + K + I +P +F G+++ G A PR AG RLAA
Sbjct: 240 SKNAYKLLTR---ERDAKGRKLTIHKIHIPSDMFITEEEAAGVVNTGLAVPRRAGDRLAA 296
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SYVNF + NG II P FGD+K+D A + + FP+ E++G +REI+LGGGN+HCITQ
Sbjct: 297 SYVNFVMPNGAIIFPTFGDEKYDALAHKKFEEIFPEREIIGF-YSREILLGGGNLHCITQ 355
Query: 298 QQPA 301
QQP
Sbjct: 356 QQPV 359
>gi|402566578|ref|YP_006615923.1| peptidyl-arginine deiminase [Burkholderia cepacia GG4]
gi|402247775|gb|AFQ48229.1| peptidyl-arginine deiminase [Burkholderia cepacia GG4]
Length = 351
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 156/352 (44%), Gaps = 70/352 (19%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQ 70
GY MPAEWE W+GWPV R D W + R FA +A I++++ V +Q
Sbjct: 10 GYRMPAEWESMDATWLGWPVLEGREDLWGNHYAQVCREFALIARTIARYQRCVVAVHHSQ 69
Query: 71 WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
E AR L + V+ ++ +W RD GP +VN A + FN WG
Sbjct: 70 AEPARELLGARVDVLPVAAEDNWLRDCGPIFLVNAQRGLGAAV--------FRFNCWGEK 121
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
Y+ + Q + I F MVLEGGS +VDG+GT +TTE CLL+ NRNP
Sbjct: 122 ----YQPYDGCQQAGQDIARAAGAEIFNSHMVLEGGSFYVDGQGTLVTTESCLLHPNRNP 177
Query: 191 HLTKGQIENELKAYLGVMKIIWLP------------RGLFGMIHDG-------------- 224
HL++ +IE EL+ LGV +I+WLP G+ I G
Sbjct: 178 HLSRAEIEAELRRMLGVERIVWLPGNPDEVETNGHVDGIASFIAPGRMLCQTALPEQGDY 237
Query: 225 -----------EAKPRLAGTRL---------------AASYVNFY----IANGGIITPQF 254
E AG R + Y + Y + NG +I F
Sbjct: 238 FHVMRENRRALELATDAAGRRFELLDLPSPIVSERFGSERYCDCYANYILVNGAVIVTAF 297
Query: 255 GDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIPTNA 306
G ++ D A V ++AFP+ V + + +GGG+IHC TQQQP++ A
Sbjct: 298 GVEQ-DQAARDVFARAFPRRNVEMLP-IPTLSIGGGSIHCSTQQQPSVTAVA 347
>gi|157953148|ref|YP_001498040.1| hypothetical protein NY2A_B844R [Paramecium bursaria Chlorella
virus NY2A]
gi|155123375|gb|ABT15243.1| hypothetical protein NY2A_B844R [Paramecium bursaria Chlorella
virus NY2A]
Length = 359
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 117/214 (54%), Gaps = 14/214 (6%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E H + WM +P R DNWR++A+ AQ+ +A IS+FE V +
Sbjct: 2 TPKQTGFYMPGEFEQHKRTWMIFPFRN---DNWREEAVPAQKTITNLARKISEFEEVIMI 58
Query: 66 ASAAQWENARSQLPEN-IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
S A L ++ +++ + W RDTG T + N V I W+F
Sbjct: 59 VSRDHLNKAMELLHDSSVKMTTADSDDCWARDTGATFITN---------GKNVKAISWDF 109
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTEECL 183
NSWGG DG Y W D ++A + +P VLEGGSIHVDGEGT +TT+ECL
Sbjct: 110 NSWGGNFDGLYTTWKNDQKIAEYMARISNVPIIKTPGFVLEGGSIHVDGEGTLITTKECL 169
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
L+ RNP +++ IE LK YL V KIIWL G+
Sbjct: 170 LSAGRNPTMSQQDIEYYLKEYLNVEKIIWLEYGV 203
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 76/124 (61%), Gaps = 11/124 (8%)
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF-------GMIHDGEAKPRLAGTRLAA 237
+KN LTK E + K ++ I +P +F G+++ G A PR AG R AA
Sbjct: 240 SKNAYKLLTK---ERDAKERKLIIHKIHIPSDMFITEEEAAGVVNTGLAIPRRAGDRFAA 296
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SYVNF + NG II P FGD+K+D A + + FP+ E+VG +REI+LGGGN+HCITQ
Sbjct: 297 SYVNFIMPNGAIIFPTFGDEKYDALAHKKFEEIFPEREIVGF-YSREILLGGGNLHCITQ 355
Query: 298 QQPA 301
QQP
Sbjct: 356 QQPV 359
>gi|448935371|gb|AGE58922.1| agmatine deiminase [Paramecium bursaria Chlorella virus NYs1]
Length = 359
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 119/215 (55%), Gaps = 16/215 (7%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E H + WM +P R DNWR +A+ AQ+ +A IS+FE V +
Sbjct: 2 TPKQTGFYMPGEFEQHKRTWMIFPFRN---DNWRQEAVPAQQTITNLARKISEFEEVIMI 58
Query: 66 ASAAQWENARSQLPEN-IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
S A L ++ ++++ + W RDTG T + N V I W+F
Sbjct: 59 VSRDHLNKAMELLHDSSVKMVTADSDDCWARDTGATFITN---------GKNVKAISWDF 109
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLP--RFPHSMVLEGGSIHVDGEGTCLTTEEC 182
NSWGG DG Y W D ++A + +P + P VLEGGSIHVDGEGT +TT+EC
Sbjct: 110 NSWGGNFDGLYMTWKNDQKIAEYMARISNVPIIKTP-GFVLEGGSIHVDGEGTLITTKEC 168
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
LL+ RNP +++ IE LK YL V KIIWL G+
Sbjct: 169 LLSAGRNPTMSQHDIEYYLKEYLNVEKIIWLEYGV 203
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 76/124 (61%), Gaps = 11/124 (8%)
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF-------GMIHDGEAKPRLAGTRLAA 237
+KN LT+ E + K + I +P +F G+++ G A PR AG RLAA
Sbjct: 240 SKNAYKLLTR---ERDAKGRKLTVHKIHIPSDMFITEEEAAGVVNTGLAVPRRAGDRLAA 296
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SYVNF + NG II P FGD+K+D A + + FP+ E+VG +REI+LGGGN+HCITQ
Sbjct: 297 SYVNFVMPNGAIIFPTFGDEKYDALAHKKFEEIFPEREIVGF-YSREILLGGGNLHCITQ 355
Query: 298 QQPA 301
QQP
Sbjct: 356 QQPV 359
>gi|158337323|ref|YP_001518498.1| peptidyl-arginine deiminase [Acaryochloris marina MBIC11017]
gi|158307564|gb|ABW29181.1| porphyromonas-type peptidyl-arginine deiminase, putative
[Acaryochloris marina MBIC11017]
Length = 373
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/353 (32%), Positives = 161/353 (45%), Gaps = 81/353 (22%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MP E EPH Q WM + E + + L QR A++A I+ +E +++ E
Sbjct: 38 MPDEGEPHKQTWMAFIASDEVWEQRQ--ILEVQRNLAEIAKTIANYEAISMLVRQQDHEL 95
Query: 74 ARSQL------PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSW 127
A L P I++IE ++N W RDTGP+ +V+++ A I++NFN W
Sbjct: 96 AVELLGGLESHPFPIQLIEFTINDLWIRDTGPSFIVDENGNK--------AAINFNFNGW 147
Query: 128 GGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
G +D Y+ D +VA + + S+VLEGG +DG+GT + TE C+LN N
Sbjct: 148 G--EDQAYQ---YDAKVADFVAQQAGVTTIQSSLVLEGGCFELDGQGTAIMTESCILNDN 202
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLPRGLFGM-IHDGE-------AKPRLA-------- 231
RNP K ++E ELK LG+ KIIWL G+ G I DG AKP +
Sbjct: 203 RNPGRNKNEVEVELKQLLGLKKIIWL-EGIKGKDITDGHTDFYARFAKPGVVMVSREADQ 261
Query: 232 -----------------------------------------GTR-LAASYVNFYIANGGI 249
GT+ AA YV +Y+ N +
Sbjct: 262 SSDDYPVTQKNIEVLQRATDAMGRPLELIILDTPLKINTKFGTKDFAAGYVGYYLCNSAV 321
Query: 250 ITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
I +FGD K D A + L+ FP +V + I GGG+IHC TQQ+P +
Sbjct: 322 IMQKFGDSKADNAARKKLATVFPNRHIVQLS-IDGIASGGGSIHCATQQEPLV 373
>gi|448931914|gb|AGE55475.1| agmatine deiminase [Paramecium bursaria Chlorella virus MA-1E]
Length = 359
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 117/214 (54%), Gaps = 14/214 (6%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E H + WM +P R DNWR +A+ AQ+ +A IS+FE V +
Sbjct: 2 TPKQTGFYMPGEFEQHKRTWMIFPFRN---DNWRQEAVPAQKTITNLARKISEFEEVIMI 58
Query: 66 ASAAQWENARSQLPEN-IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
S A L ++ ++++ + W RDTG T + N V I W+F
Sbjct: 59 VSRDHLNKAMELLHDSSVKMVTADSDDCWARDTGATFITN---------GKIVKAISWDF 109
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTEECL 183
NSWGG DG Y W D ++A + +P VLEGGSIHVDGEGT +TT+ECL
Sbjct: 110 NSWGGNFDGLYTTWKNDQKIAEYMARISNVPIIKTPGFVLEGGSIHVDGEGTLITTKECL 169
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
L+ RNP +++ IE LK YL V KIIWL G+
Sbjct: 170 LSAGRNPTMSQQDIEYYLKEYLNVEKIIWLEYGV 203
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 76/124 (61%), Gaps = 11/124 (8%)
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF-------GMIHDGEAKPRLAGTRLAA 237
+KN LT+ E + K + I +P +F G+++ G A PR AG RLAA
Sbjct: 240 SKNAYKLLTR---ERDAKGRKLTIHKIHIPSDMFITKEEAAGVVNTGLAIPRRAGDRLAA 296
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SYVNF + NG II P FGD+K+D A + + FP+ E+VG +REI+LGGGN+HC+TQ
Sbjct: 297 SYVNFVMPNGAIIFPTFGDEKYDALAHKKFEEIFPEREIVGF-YSREILLGGGNLHCVTQ 355
Query: 298 QQPA 301
QQP
Sbjct: 356 QQPV 359
>gi|448930861|gb|AGE54425.1| agmatine deiminase [Paramecium bursaria Chlorella virus IL-5-2s1]
Length = 359
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 117/214 (54%), Gaps = 14/214 (6%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E H + WM +P R DNWR +A+ AQ+ +A IS+FE V +
Sbjct: 2 TPKQTGFYMPGEFEQHKRTWMIFPFRN---DNWRQEAVPAQQTITNLARKISEFEEVIMI 58
Query: 66 ASAAQWENARSQLPEN-IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
S A L ++ ++++ + W RDTG T + N V I W+F
Sbjct: 59 VSRDHLNKAMELLHDSSVKMVTADSDDCWARDTGATFITN---------GKNVKAISWDF 109
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTEECL 183
NSWGG DG Y W D ++A + +P VLEGGSIHVDGEGT +TT+ECL
Sbjct: 110 NSWGGNFDGLYTTWKNDQKIAEYMARISNVPIIKTPGFVLEGGSIHVDGEGTLITTKECL 169
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
L+ RNP +++ IE LK YL V KIIWL G+
Sbjct: 170 LSVGRNPTMSQQDIEYYLKEYLNVEKIIWLEYGV 203
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 76/124 (61%), Gaps = 11/124 (8%)
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF-------GMIHDGEAKPRLAGTRLAA 237
+KN LT+ E + K + I +P +F G+++ G A PR AG RLAA
Sbjct: 240 SKNAYKLLTR---ERDAKGRKLTVHKIHIPSDMFITEEEAAGVVNTGLAVPRRAGDRLAA 296
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SYVNF + NG II P FGD+K+D A + + FP+ E+VG +REI+LGGGN+HCITQ
Sbjct: 297 SYVNFVMPNGAIIFPTFGDEKYDALAHKKFEEIFPEREIVGF-YSREILLGGGNLHCITQ 355
Query: 298 QQPA 301
QQP
Sbjct: 356 QQPV 359
>gi|421280907|ref|ZP_15731705.1| agmatine deiminase [Streptococcus pneumoniae GA04672]
gi|421309357|ref|ZP_15759984.1| agmatine deiminase [Streptococcus pneumoniae GA62681]
gi|395882068|gb|EJG93115.1| agmatine deiminase [Streptococcus pneumoniae GA04672]
gi|395910778|gb|EJH21647.1| agmatine deiminase [Streptococcus pneumoniae GA62681]
Length = 350
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 115/206 (55%), Gaps = 12/206 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAE+EPH M WP R +W A+R F ++ I++ E V + A
Sbjct: 1 MPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIETIAEGERVYLLVEQAYLSE 57
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
A+S L + + +++ N +W RDTGPTI+VN K +DW FN+WGG DG
Sbjct: 58 AQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDWAFNAWGGTYDG 109
Query: 134 CYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
Y+D+ D QVA + P + VLEGG+IH DG+GT L TE CLL+ RNP+L
Sbjct: 110 LYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPGRNPNL 169
Query: 193 TKGQIENELKAYLGVMKIIWLPRGLF 218
TK +IEN L LG K+IWLP G++
Sbjct: 170 TKEEIENTLLESLGAEKVIWLPYGIY 195
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 285 RLAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 342
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 343 CITQQIP 349
>gi|345012042|ref|YP_004814396.1| Agmatine deiminase [Streptomyces violaceusniger Tu 4113]
gi|344038391|gb|AEM84116.1| Agmatine deiminase [Streptomyces violaceusniger Tu 4113]
Length = 387
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/374 (33%), Positives = 169/374 (45%), Gaps = 92/374 (24%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDAL-HAQRVFAKVATAISKFEP 61
++ TPA G+ MPAEWEPH CWM WP + WR+ A + + A E
Sbjct: 4 VDSTPAADGFRMPAEWEPHDGCWMAWP---QNGYVWREGARPAQRALAALANAVADTGEA 60
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VTV + Q+ +ARS+L +RV+EM+ W RD PT VV+ + + G+D
Sbjct: 61 VTVTVTGDQYAHARSRLDSRVRVVEMTSWLGWARDIAPTFVVDGTG--------RRRGVD 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
+ FN +G Y W+ D Q A+++L R+ +VLEGGS HVDGEGT L T E
Sbjct: 113 FAFNGYGNR----YPYWATDDQYAQRVLDLTATDRYRAPLVLEGGSFHVDGEGTALVTAE 168
Query: 182 CLLNKNRNP--------HL---------------------TKGQIEN-ELKAYLGVMKII 211
LL+ RN HL T+G ++N A GV+ +
Sbjct: 169 TLLDPARNDAPSRTAMHHLMAAYLGVTRTVWIEWGLAYDGTRGHVDNMACFAAPGVVCLT 228
Query: 212 WL-----------------------PRG---------LFGMIHDGEAKPR--------LA 231
W RG L G +H EA+ R
Sbjct: 229 WTDDTSDPQYERSARALEDLRNVQDARGRTLRVEKLPLPGPLHATEAELRGIDRHGVPTT 288
Query: 232 GT----RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
GT RLAASY NFY + P D + D EA+ L++ P + VVG+ RE++L
Sbjct: 289 GTAPRPRLAASYTNFYTTEDHLFVPLL-DPEHDDEALARLARIHPHHTVVGLP-TRELLL 346
Query: 288 GGGNIHCITQQQPA 301
GGGNIHC TQQ P+
Sbjct: 347 GGGNIHCATQQIPS 360
>gi|418164786|ref|ZP_12801456.1| agmatine deiminase [Streptococcus pneumoniae GA17371]
gi|418171478|ref|ZP_12808102.1| agmatine deiminase [Streptococcus pneumoniae GA19451]
gi|419447003|ref|ZP_13987008.1| agmatine deiminase [Streptococcus pneumoniae 7879-04]
gi|421287641|ref|ZP_15738406.1| agmatine deiminase [Streptococcus pneumoniae GA58771]
gi|353829647|gb|EHE09778.1| agmatine deiminase [Streptococcus pneumoniae GA17371]
gi|353835215|gb|EHE15309.1| agmatine deiminase [Streptococcus pneumoniae GA19451]
gi|379614543|gb|EHZ79253.1| agmatine deiminase [Streptococcus pneumoniae 7879-04]
gi|395888253|gb|EJG99265.1| agmatine deiminase [Streptococcus pneumoniae GA58771]
Length = 350
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 115/206 (55%), Gaps = 12/206 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAE+EPH M WP R +W A+R F ++ I++ E V + A
Sbjct: 1 MPAEYEPHHGTLMIWPTR---PGSWPFQGKAAKRAFTQIIETIAEGERVYLLVEQAYLYE 57
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
A+S L + + +++ N +W RDTGPTI+VN K +DW FN+WGG DG
Sbjct: 58 AQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDWAFNAWGGTYDG 109
Query: 134 CYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
Y+D+ D QVA + P + VLEGG+IH DG+GT L TE CLL+ RNP+L
Sbjct: 110 LYQDYEEDDQVASRFAEVLEKPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPGRNPNL 169
Query: 193 TKGQIENELKAYLGVMKIIWLPRGLF 218
TK +IEN L LG K+IWLP G++
Sbjct: 170 TKEEIENTLLESLGAEKVIWLPYGIY 195
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 285 RLAASYVNFYIANKAVLVPQFEDVN-DQVAIDILSKCFPDRKVVGIP-ARDILLGGGNIH 342
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 343 CITQQIP 349
>gi|448925058|gb|AGE48639.1| agmatine deiminase [Paramecium bursaria Chlorella virus AN69C]
gi|448930481|gb|AGE54046.1| agmatine deiminase [Paramecium bursaria Chlorella virus IL-3A]
gi|448934991|gb|AGE58543.1| agmatine deiminase [Paramecium bursaria Chlorella virus NY-2B]
Length = 359
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 117/214 (54%), Gaps = 14/214 (6%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E H + WM +P R DNWR +A+ AQ+ +A IS+FE V +
Sbjct: 2 TPKQTGFYMPGEFEQHKRTWMIFPFRN---DNWRQEAVPAQQTITNLARKISEFEEVIMI 58
Query: 66 ASAAQWENARSQLPEN-IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
S A L ++ ++++ + W RDTG T + N V I W+F
Sbjct: 59 VSRDHLNKAMELLHDSSVKMVTADSDDCWARDTGATFITN---------GKIVKAISWDF 109
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTEECL 183
NSWGG DG Y W D ++A + +P VLEGGSIHVDGEGT +TT+ECL
Sbjct: 110 NSWGGNFDGLYTTWKNDQKIAEYMARISNVPIIKTPGFVLEGGSIHVDGEGTLITTKECL 169
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
L+ RNP +++ IE LK YL V KIIWL G+
Sbjct: 170 LSAGRNPTMSQQDIEYYLKEYLNVEKIIWLEYGV 203
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 76/124 (61%), Gaps = 11/124 (8%)
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF-------GMIHDGEAKPRLAGTRLAA 237
+KN LT+ E + K + I +P +F G+++ G A PR AG RLAA
Sbjct: 240 SKNAYKLLTR---ERDAKGRKLTIHKIHIPSDMFITEEEAAGVVNTGLAVPRRAGDRLAA 296
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SYVNF + NG II P FGD+K+D A + + FP+ E++G +REI+LGGGN+HC+TQ
Sbjct: 297 SYVNFVMPNGAIIFPTFGDEKYDALAHKKFEEIFPEREIIGF-YSREILLGGGNLHCVTQ 355
Query: 298 QQPA 301
QQP
Sbjct: 356 QQPV 359
>gi|355154349|ref|YP_002787066.2| agmatine deiminase [Deinococcus deserti VCD115]
gi|315271319|gb|ACO47312.2| putative agmatine deiminase [Deinococcus deserti VCD115]
Length = 351
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/353 (31%), Positives = 155/353 (43%), Gaps = 77/353 (21%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEWE H+ WM WP E W L + FA++ I++FEPV +
Sbjct: 10 TPRELGFRMPAEWESHAATWMSWPADDEL---WFGHLLGVREEFAELVRTIARFEPVQLL 66
Query: 66 ASAAQWE-NARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWN 123
+ E +AR +L ++ + ++ W RD GP V + +A ++W
Sbjct: 67 VRDPESEQDARGRLEGADVTYHRLPLDDVWLRDNGPIFV---------RRGNDLAFVNWR 117
Query: 124 FNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECL 183
FNSWGG +W D QV + + VLEGG + V+G G LTT C
Sbjct: 118 FNSWGG-----KFNWEHDDQVPEYVAQVLGAAHWDRPEVLEGGGLEVNGLGVGLTTRSCF 172
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG------------------E 225
L RNP LT+ L LGV +++WL GL DG E
Sbjct: 173 LTDTRNPGLTEEDYGALLNDTLGVSQLLWLDGGLENDHTDGHIDTITRFTDERTIVTSVE 232
Query: 226 AKP------------------------------------RLAGT--RLAASYVNFYIANG 247
+ P RL G RL +Y NFYI NG
Sbjct: 233 SNPADPNHAVMQKNLEALRRMTDQDGQPFRIVELPLPASRLEGAEGRLPPTYANFYIGNG 292
Query: 248 GIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
++ P +GD D A+ VL FP+ EV+G+ +R+I+ GGG+ HC+TQQQP
Sbjct: 293 FVVVPMYGDPN-DARAIEVLRPLFPQREVIGLP-SRKIIEGGGSFHCVTQQQP 343
>gi|418977843|ref|ZP_13525652.1| agmatine deiminase [Streptococcus mitis SK575]
gi|383349390|gb|EID27332.1| agmatine deiminase [Streptococcus mitis SK575]
Length = 361
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 123/217 (56%), Gaps = 12/217 (5%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+E H M WP R +W A+ F+++ I++ E V
Sbjct: 1 MMDSPKKLGYRMPAEYEAHHGTLMIWPTR---PGSWPFQGKAAKAAFSQIIKTIAQGERV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A+ L +++ +++ N +W RDTGPTI+VN + K+A +DW
Sbjct: 58 YLLVEQDYLSEAQDYLGDSVVYLDIPTNDAWARDTGPTILVND-------KGQKLA-MDW 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
+FN+WGG DG Y+D+ D QVA + +P + VLEGG+IH DG+GT L TE
Sbjct: 110 SFNAWGGAVDGLYQDYEDDDQVASRFAEALEMPVYDAKPFVLEGGAIHSDGQGTILVTES 169
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNPHL+K +IEN L LG K+IWLP G++
Sbjct: 170 CLLSLGRNPHLSKEEIENTLLECLGAEKVIWLPYGIY 206
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF DK D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 296 RLAASYVNFYIANKAVLVPQFQDKN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 353
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 354 CITQQIP 360
>gi|359402651|ref|ZP_09195558.1| agmatine deiminase [Spiroplasma melliferum KC3]
gi|357967868|gb|EHJ90377.1| agmatine deiminase [Spiroplasma melliferum KC3]
Length = 370
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 122/224 (54%), Gaps = 18/224 (8%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ +P E H Q WM WP DNW+ DA AQ++FA VA IS +EPV
Sbjct: 5 LTTTPQEDGFYLPGETSNHIQTWMIWP---HMKDNWQKDAFPAQKIFALVAKIISNYEPV 61
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
+ + + + L NI +I+ SW RD G +VN++ +
Sbjct: 62 QMIVNEQNYLRVKKMLANSNINLIKTHYYDSWARDIGALYLVNENGEHRA--------VS 113
Query: 122 WNFNSWGGVDDGCYR------DWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGT 175
+ FN WG + + D+++D +VA + +T + + +VLE GSI+VDGEGT
Sbjct: 114 FEFNGWGMQNSLMLKAKNFKWDYNVDNKVAITMANTSGVDYYVCPLVLESGSINVDGEGT 173
Query: 176 CLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
TTEECLLN NRNP LTK +IE LK YL V KIIW+PRGL+
Sbjct: 174 LYTTEECLLNPNRNPTLTKLEIEQYLKQYLNVKKIIWIPRGLYN 217
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 227 KPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIV 286
K R+ G RL ASY+NF+ N +I P FGD +D +A+ VL + FPK +V+ I AREI+
Sbjct: 298 KHRMPGFRLPASYLNFHFVNKALICPIFGDPVYDQKAIMVLRKCFPKRKVIPI-YAREII 356
Query: 287 LGGGNIHCITQQQ 299
+GGG I+ +TQ +
Sbjct: 357 IGGGGINSMTQSE 369
>gi|189500656|ref|YP_001960126.1| Agmatine deiminase [Chlorobium phaeobacteroides BS1]
gi|189496097|gb|ACE04645.1| Agmatine deiminase [Chlorobium phaeobacteroides BS1]
Length = 347
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 164/357 (45%), Gaps = 79/357 (22%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQ 70
Y MP EW PH W+ WP + +W VFA++A + +FE V + +
Sbjct: 5 SYTMPPEWAPHDATWLSWP---HKEASWPGKFGPVPDVFARIAAHLCRFERVHINVLGPE 61
Query: 71 WE-NARSQLP---------ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
E +AR ++ +NI + + +W RD GP V ++ + + +
Sbjct: 62 MEYDARERIRRFVKEASCMQNIVFHPIPTDDAWCRDHGPNYVFRRTE-----EGLEKVIL 116
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
+W FN+WGG Y + D VA ++ + + + MVLEGG+I V+G+G LTTE
Sbjct: 117 NWKFNAWGGK----YEPYDSDAAVAERVAAEQGVRLVATDMVLEGGAIDVNGKGLLLTTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG---------------- 224
CLLN NRNP + K IEN LK YLGV KI+WL G+ G DG
Sbjct: 173 ACLLNPNRNPDMVKEDIENVLKYYLGVEKILWLKDGIAGDDTDGHVDDMARFVDERTVVI 232
Query: 225 ---------------------------EAKPRLAGT------------RLAASYVNFYIA 245
E KP T RL ASY NFYIA
Sbjct: 233 TVEENPEDENHAVLLENYRRLKQYTDLEDKPLRIVTLPMPDAVYYENERLPASYANFYIA 292
Query: 246 NGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
N ++ P +G K D A+ +L++ FP EV GI+ ++V G G IHC+T ++P++
Sbjct: 293 NNQVLVPVYGCDK-DRVALDILARCFPSREVTGID-CTDLVWGLGAIHCVTHEEPSL 347
>gi|438117265|ref|ZP_20871036.1| agmatine deiminase [Spiroplasma melliferum IPMB4A]
gi|434156107|gb|ELL44994.1| agmatine deiminase [Spiroplasma melliferum IPMB4A]
Length = 370
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 121/224 (54%), Gaps = 18/224 (8%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ +P E H Q WM WP DNW+ DA AQ++FA VA IS +EPV
Sbjct: 5 LTTTPQEDGFYLPGETSNHIQTWMIWP---HMKDNWQKDAFPAQKIFALVAKIISNYEPV 61
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
+ + + + L NI +I+ SW RD G +VN+ +
Sbjct: 62 QMIVNEQNYLRVKKMLANSNINLIKTHYYDSWARDIGALYLVNEKGEHRA--------VS 113
Query: 122 WNFNSWGGVDDGCYR------DWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGT 175
+ FN WG + + D+++D +VA + +T + + +VLE GSI+VDGEGT
Sbjct: 114 FEFNGWGMQNSLMLKAKNFKWDYNVDNKVAITMANTSGVDYYVCPLVLESGSINVDGEGT 173
Query: 176 CLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
TTEECLLN NRNP LTK +IE LK YL V KIIW+PRGL+
Sbjct: 174 LYTTEECLLNPNRNPTLTKLEIEQYLKQYLNVKKIIWIPRGLYN 217
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 227 KPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIV 286
K R+ G RL ASY+NF+ N +I P FGD +D +A+ VL + FPK +V+ I AREI+
Sbjct: 298 KHRMPGFRLPASYLNFHFVNKALICPIFGDPVYDQKAIMVLRKCFPKRKVIPI-YAREII 356
Query: 287 LGGGNIHCITQQQ 299
+GGG I+ +TQ +
Sbjct: 357 IGGGGINSMTQSE 369
>gi|448933922|gb|AGE57477.1| agmatine deiminase [Paramecium bursaria Chlorella virus NE-JV-4]
Length = 359
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 117/214 (54%), Gaps = 14/214 (6%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+E H + WM +P R DNWR +A+ AQ+ +A IS+FE V +
Sbjct: 2 TPKQTGFYMPGEFEQHKRTWMIFPFRN---DNWRQEAVPAQKTITNLARKISEFEEVIMI 58
Query: 66 ASAAQWENARSQLPEN-IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
+ A L ++ ++++ + W RDTG T + N V I W+F
Sbjct: 59 VARDHLNKAMELLHDSSVKMVTADSDDCWARDTGATFITN---------GKIVKAISWDF 109
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTEECL 183
NSWGG DG Y W D ++A + +P VLEGGSIHVDGEGT +TT+ECL
Sbjct: 110 NSWGGNFDGLYTTWKNDQKIAEYMARISNVPIIKTPGFVLEGGSIHVDGEGTLITTKECL 169
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
L+ RNP +++ IE LK YL V KIIWL G+
Sbjct: 170 LSAGRNPTMSQQDIEYYLKEYLNVEKIIWLEYGV 203
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 76/124 (61%), Gaps = 11/124 (8%)
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF-------GMIHDGEAKPRLAGTRLAA 237
+KN LT+ E + K + I +P +F G+++ G A PR AG RLAA
Sbjct: 240 SKNAYKLLTR---ERDAKGRKLTIHKIHIPSDMFITEEEAAGVVNTGLAVPRRAGDRLAA 296
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SYVNF + NG II P FGD+K+D A + + FP+ E++G +REI+LGGGN+HC+TQ
Sbjct: 297 SYVNFVMPNGAIIFPTFGDEKYDALAHKKFEEIFPEREIIGF-YSREILLGGGNLHCVTQ 355
Query: 298 QQPA 301
QQP
Sbjct: 356 QQPV 359
>gi|237756699|ref|ZP_04585202.1| agmatine deiminase [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691138|gb|EEP60243.1| agmatine deiminase [Sulfurihydrogenibium yellowstonense SS-5]
Length = 339
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 159/355 (44%), Gaps = 87/355 (24%)
Query: 14 MPAEWEPHSQCWMGWP----VRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
+P EW H W+ +P +E++DN RD + + +S+ E V + +
Sbjct: 6 LPPEWSKHKGTWLSYPHNPDTFFEKIDNVRDK-------YTDMVKLLSECEEVHINVNDE 58
Query: 70 QWEN-ARSQLPE------NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ EN S+L + N+ + N +W RD G VV++ K+ +D+
Sbjct: 59 EMENDVLSRLKDKRANLNNVFIHRFPTNDAWCRDHGAIFVVDRDEN-------KLVALDF 111
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG + LD ++ +K+ + R MVLEGGSI V+G G LTTE C
Sbjct: 112 KFNAWGG-----KYPYELDNEIPKKMAEYLNVERIEIDMVLEGGSIDVNGNGLLLTTESC 166
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG------------------ 224
LLN NRNP+++K +IE LK Y GV KI+WL G+ G DG
Sbjct: 167 LLNPNRNPNMSKEEIEENLKYYFGVEKILWLKEGIVGDDTDGHIDDITRFINENTVITVV 226
Query: 225 EAKPR-------------------LAGTRL------------------AASYVNFYIANG 247
E P + G +L ASY NFYI+N
Sbjct: 227 EENPNDENYPILKENYEMLKTFTDIKGNKLNIITLPMPDPVYYKGDRLPASYANFYISNK 286
Query: 248 GIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
+I P F K D A+ +L F VVGI+ A +IV+G G HC+TQQ P +
Sbjct: 287 YVIVPIFNCDK-DKIALEILQSVFTDRAVVGID-ASDIVVGLGTFHCLTQQIPYV 339
>gi|392945609|ref|ZP_10311251.1| peptidylarginine deiminase-like enzyme [Frankia sp. QA3]
gi|392288903|gb|EIV94927.1| peptidylarginine deiminase-like enzyme [Frankia sp. QA3]
Length = 351
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 158/346 (45%), Gaps = 73/346 (21%)
Query: 17 EWEPHSQCWMGWPVRYERLDNWRDDALHAQR-VFAKVATAISKFEPVTVCASAAQWENAR 75
EWEPH++ WM +P + L A R +A+VA IS++EPVT+ A Q A
Sbjct: 17 EWEPHTRTWMAFPPPNDTFGAQGSPGLAAARSAWARVAATISRYEPVTLIAGPGQGATAA 76
Query: 76 SQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCY 135
+P + VIE+ ++ +W RD+GPT ++ ++ +DW FN WG +
Sbjct: 77 RLVPPAVTVIEVGLDDAWVRDSGPTFTIDDGQ--------RLGAVDWVFNGWGAQQ---W 125
Query: 136 RDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKG 195
W D +A + ++ EGG I VDG GT L TE L+ +RNP +
Sbjct: 126 ASWDTDRLLATAVAERAGAAVRHSALTNEGGGIAVDGAGTVLLTETVQLDPHRNPGWDRA 185
Query: 196 QIENELKAYLGVMKIIWLPRGL------FGM-----------------IHD--GEAKPRL 230
++E EL A LG + IWLPRG+ FG +H A P
Sbjct: 186 RVEAELHAQLGTTRAIWLPRGVARDYDRFGTRGHVDVVAAFVRPGLVAVHSQPDPAHPDH 245
Query: 231 AGTR-LAA---------------------------------SYVNFYIANGGIITPQFGD 256
A TR LAA SY+N+Y+ANG ++ F D
Sbjct: 246 ATTRELAALLRASRDAAGRPLEVVQIAAPTVLEVDGGPAGYSYLNYYVANGLVVAGVFDD 305
Query: 257 KKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
+ D +A+ +L++ +P V ++ AR I GG +HCITQQQP I
Sbjct: 306 PR-DADALGLLARLYPTRRVEPVD-ARVIFAHGGGVHCITQQQPRI 349
>gi|254283878|ref|ZP_04958846.1| agmatine deiminase [gamma proteobacterium NOR51-B]
gi|219680081|gb|EED36430.1| agmatine deiminase [gamma proteobacterium NOR51-B]
Length = 326
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/344 (32%), Positives = 155/344 (45%), Gaps = 73/344 (21%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAEW PH +CWM WP R W D +A VA AI++FEP+T+
Sbjct: 1 MPAEWTPHERCWMAWPCREAM---WHDFEATCGN-YAAVAQAIARFEPLTMVVPPRLASQ 56
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
AR L +I ++E+ ++ SW RD+GP V+N + +AG+ + FN+WG
Sbjct: 57 ARDYLGSDIELLELPIDDSWARDSGPNFVINAAG--------DLAGVCFRFNAWGEK--- 105
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
Y + D +A +IL + ++ EGG I VDGEGT LTT+ C ++NRNP +
Sbjct: 106 -YSPYDQDALLAPRILDHLGVRAIASELIAEGGGICVDGEGTLLTTDTCFPHQNRNPDWS 164
Query: 194 KGQI---------------------ENE-------LKAYLGVMKIIWL-------PRG-L 217
+ +I +NE + + G KII PR
Sbjct: 165 RDRIEAELMEKLGVSKVIWLPGDPLDNETDGHIDGIATFAGPGKIIVESSRDASDPRKPY 224
Query: 218 FGMIHDGEAKPRLA-------------------GTRLAASYVNFYIANGGIITPQFGDKK 258
F + D A+ A G R SYVNFY ANG +I P +G
Sbjct: 225 FDSLRDQLAQETDARGRRFELLTLPEAPEDCALGERFCLSYVNFYYANGAVIAPSYGIPT 284
Query: 259 WDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
D E L FP E+ + +I +GGG IHCITQQQP +
Sbjct: 285 -DDEVRERLQTYFPDREIAMVP-VTDIAIGGGGIHCITQQQPLV 326
>gi|182435774|ref|YP_001823493.1| peptidylarginine deiminase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178464290|dbj|BAG18810.1| putative peptidylarginine deiminase [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 347
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 157/351 (44%), Gaps = 75/351 (21%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+ MP EW PH + WM WP + + A+ +A VA A+ +FEPVT+ Q
Sbjct: 8 FRMPPEWAPHERTWMAWPGPNPTFAS-DAELARARGAWAAVARAVRRFEPVTMVVGPGQE 66
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
E A + L ++ ++ ++ +W RD GPT V + S+ +A +DW FN WG
Sbjct: 67 EGAAALLGPDVELVVRPLDDAWMRDIGPTFVTDGST---------LAAVDWTFNGWGA-- 115
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
G R W D +AR + P +V EGG+IHVDGEGT L TE L + RNP
Sbjct: 116 QGWAR-WESDQHIARAVAELTGAPAHSSPLVNEGGAIHVDGEGTVLLTETVQLGRERNPG 174
Query: 192 LTKGQIENELKAYLGVMKIIWLPR------GLFG-----------------MIH------ 222
++ Q+E E+ A LG K IWLPR G +G ++H
Sbjct: 175 WSRAQVEAEIHARLGTEKAIWLPRGLTADYGTYGTLGHVDIVAAFARPGTVLVHVQPDPA 234
Query: 223 --DGEAKPRLAGTRLAA-----------------------------SYVNFYIANGGIIT 251
D E L+ AA SY+N Y+ N G++
Sbjct: 235 HPDHEVTRELSAVLRAATDARGRALEVVEVPAPTVLRDEDGEWADYSYINHYLCNDGVVL 294
Query: 252 PQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
F D + D EA + FP V ++ AR I GGG IHC+TQQQP +
Sbjct: 295 CAFDDPR-DEEAAAIFRGLFPDRTVTLVD-ARTIFAGGGGIHCVTQQQPKV 343
>gi|188997497|ref|YP_001931748.1| Agmatine deiminase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932564|gb|ACD67194.1| Agmatine deiminase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 339
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 161/355 (45%), Gaps = 87/355 (24%)
Query: 14 MPAEWEPHSQCWMGWP----VRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
MP EW H W+ +P +E++DN RD + + +S+ E V + +
Sbjct: 6 MPPEWSKHKGTWLSYPHNPDTFFEKIDNVRDK-------YTDMVKLLSECEEVHINVNDE 58
Query: 70 QWEN-ARSQLPE------NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ E+ S+L + N+ + N +W RD G V++++ K+ +D+
Sbjct: 59 EMEDDVLSRLKDKKANLNNVFIHRFPTNDAWCRDHGAIFVLDRNEN-------KLVALDF 111
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG + LD ++ +K+ + R MVLEGGSI V+G G LTTE C
Sbjct: 112 KFNAWGG-----KYPYELDNELPKKMAEYLNVERIEIDMVLEGGSIDVNGNGLLLTTESC 166
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG------------------ 224
LLN NRNP+++K +IE LK Y GV KI+WL G+ G DG
Sbjct: 167 LLNPNRNPNMSKEEIEENLKYYFGVEKILWLKEGIVGDDTDGHIDDITRFINENTVITVV 226
Query: 225 EAKPR-------------------LAGTRL------------------AASYVNFYIANG 247
E P + G +L ASY NFYI+N
Sbjct: 227 EENPNDENYPILKENYEMLKTFTDIKGNKLNIITLPMPDPVYYKGDRLPASYANFYISNK 286
Query: 248 GIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
+I P F K D A+ ++ FP VVGI+ A +IV+G G HC+TQQ P +
Sbjct: 287 YVIVPIFNCDK-DKIALEIIQSVFPDRMVVGID-ASDIVVGLGTFHCLTQQIPYV 339
>gi|443671627|ref|ZP_21136732.1| putative uncharacterized protein [Rhodococcus sp. AW25M09]
gi|443415812|emb|CCQ15069.1| putative uncharacterized protein [Rhodococcus sp. AW25M09]
Length = 339
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 115/356 (32%), Positives = 158/356 (44%), Gaps = 76/356 (21%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MP+E P + WM +P L + A+ +A VA A+++FEPVTV A+
Sbjct: 1 MPSETAPQDKVWMAFPCEGYSLGEDPEAKHEARSTWAAVAHAVAEFEPVTVVVDPAERGV 60
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
A + L +I ++E +N +W RD GPT V A G+ VA +DW FN WG D
Sbjct: 61 AATYLSRDIDIVEAPLNDAWMRDIGPTFV----HAGDGS----VAAVDWIFNGWGAQD-- 110
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ W D ++A + + + R +V EGG I VDG GT L TE L+ RNP L+
Sbjct: 111 -WAQWDKDCRIAEFVANRAAVQRVTSPIVNEGGGIAVDGAGTVLITETVQLDPGRNPGLS 169
Query: 194 KGQIENELKAYLGVMKIIWLPRGL------FGM--------------------------- 220
K IE EL +G +IWLPRGL FG
Sbjct: 170 KADIEAELARTIGARHVIWLPRGLTRDSMRFGTRGHVDIVAAIPSPGTVLVHRQRDEAHP 229
Query: 221 --------------IHDGEAK-------PRLAGTRLAASYVNF-----YIANGGIITPQF 254
HDG + P R +V++ + NGG+I +
Sbjct: 230 DHQVSELIVDTLRATHDGAGEDWNIIEVPAPQTLRDTDGFVDYSYINHLVVNGGVIACSY 289
Query: 255 GDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIPTNAAKLD 310
D D EA +L A+P +VV ++ AR + GG IHCITQ QP +A KLD
Sbjct: 290 -DDPVDQEAAAILQDAYPGRKVVTVD-ARPLFERGGGIHCITQHQP----SARKLD 339
>gi|383651289|ref|ZP_09961695.1| putative agmatine deiminase [Streptomyces chartreusis NRRL 12338]
Length = 345
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 113/213 (53%), Gaps = 14/213 (6%)
Query: 8 ALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRV-FAKVATAISKFEPVTVCA 66
A G+ MPAEW PH + WM WP D+ D L A R+ +A VA AI +FEPVTV
Sbjct: 4 AADGFRMPAEWAPHERTWMAWPGPNPTFDDPED--LAAARIAWASVARAIRRFEPVTVVC 61
Query: 67 SAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
Q AR+ L E I +E ++ +W RDTGPT + + +A +DW FN
Sbjct: 62 GPGQSARARTLLGEGIETVERDLDDAWMRDTGPTFLTDGRGG--------LAAVDWTFNG 113
Query: 127 WGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNK 186
WG + W D ++A + + +V EGG+IHVDGEGT L TE L
Sbjct: 114 WGAQ---SWARWEHDAKIAAHVADLAGARTYASQLVNEGGAIHVDGEGTVLLTETVQLGP 170
Query: 187 NRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
RNP T+ +IE E+ A LG K IWLPRGL G
Sbjct: 171 ERNPGWTRERIEAEIHALLGTRKAIWLPRGLTG 203
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ NGG++ F D + D A + + FP+ V + AR I GGG IHCITQ
Sbjct: 283 SYINHYLCNGGLVLCGFDDPR-DELAAGIFRRLFPQRTVT-LADARTIFAGGGGIHCITQ 340
Query: 298 QQPAI 302
QQP I
Sbjct: 341 QQPKI 345
>gi|220910842|ref|YP_002486151.1| Agmatine deiminase [Arthrobacter chlorophenolicus A6]
gi|219857720|gb|ACL38062.1| Agmatine deiminase [Arthrobacter chlorophenolicus A6]
Length = 375
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 161/348 (46%), Gaps = 73/348 (20%)
Query: 13 LMPAEWEPHSQCWMGWPVRYERLDNWRDDAL-HAQRVFAKVATAISKFEPVTVCASAAQW 71
+MPAEW PH Q WM +P + L A+ + VA I+++EPVTV A
Sbjct: 33 VMPAEWSPHQQTWMAFPPPNDTFGAAGSATLDRARAAWTSVARTIARYEPVTVVADPRDA 92
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
AR L I V+E+ ++ +W RD+GP+ V + + +DW FN WG +
Sbjct: 93 TAAREWLGSGIAVVEIPLDDAWIRDSGPSFVHQPDGS--------LTAVDWVFNGWGAQE 144
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ W D +VA + + +P S+V EGG HVDGEGT L TE L+ RNP
Sbjct: 145 ---WAAWGKDRKVASAVAAQSDVPVRSSSLVNEGGGFHVDGEGTVLLTETVQLDPGRNPG 201
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIH------ 222
TK +E E+ A LG K IWLPRGL FG ++H
Sbjct: 202 ATKESVEVEIHAALGTTKAIWLPRGLTRDYDEFGTRGHVDIVAAFAGPGTILLHRQDNPD 261
Query: 223 ------------------DGEAKP-RL----AGTRLA--ASYVNF-YI----ANGGIITP 252
D + +P R+ A T L+ YV++ YI AN ++
Sbjct: 262 HPDHAVYLQLKAVLQGQLDAQGRPLRIIDVPAPTVLSDDEGYVDWSYINHYVANNAVVLC 321
Query: 253 QFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
FGD D A +L +A+P V ++ AR+I GG IHCITQQQP
Sbjct: 322 AFGDPN-DAIAQGILERAYPGRTVELVD-ARDIFAFGGGIHCITQQQP 367
>gi|290954044|ref|ZP_06558665.1| hypothetical protein FtulhU_07162 [Francisella tularensis subsp.
holarctica URFT1]
Length = 282
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 141/296 (47%), Gaps = 69/296 (23%)
Query: 13 LMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWE 72
L PAEWE HS WM WP R +D W + A ++AKVA I+K+EPV + + Q +
Sbjct: 3 LWPAEWEEHSATWMIWPAR---IDMWPN-ITKAYEIYAKVANTIAKYEPVNMVVNQHQLD 58
Query: 73 NARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDD 132
A++ L +NI +I ++ SW RD P +A K+ +++FN W
Sbjct: 59 IAKNYLVKNITLISEVVDDSWARDIMPIF---------SFKADKLIANNFDFNCWSNK-- 107
Query: 133 GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
+ + D ++ I ++ M+LEGG++H +G+G LTT+ECLLN NRNP++
Sbjct: 108 --FSPFDNDRRLKNDIAKQQKWQVNSSKMILEGGAVHSNGQGVLLTTKECLLNLNRNPNM 165
Query: 193 TKGQIENELKAYLGVMKIIWLPRGLFGMIH-DGEA------------------------- 226
K QIE+EL + LGV KI+WLP G+ G DG
Sbjct: 166 QKEQIESELISILGVKKILWLPYGVAGDFDTDGHVDNVACFANKNTIIIQSCYDENDENF 225
Query: 227 -----------------------KPR---LAGTRLAASYVNFYIANGGIITPQFGD 256
+PR AG RLA SY+NFYI N II P FGD
Sbjct: 226 ARHQANMTYLDKYASEFNIVEIPQPRAQYFAGERLALSYLNFYIVNNAIIMPAFGD 281
>gi|294012173|ref|YP_003545633.1| putative peptidylarginine deiminase [Sphingobium japonicum UT26S]
gi|390169426|ref|ZP_10221362.1| putative peptidylarginine deiminase [Sphingobium indicum B90A]
gi|292675503|dbj|BAI97021.1| putative peptidylarginine deiminase [Sphingobium japonicum UT26S]
gi|389587923|gb|EIM65982.1| putative peptidylarginine deiminase [Sphingobium indicum B90A]
Length = 327
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 151/340 (44%), Gaps = 66/340 (19%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV-TVCASAAQ 70
+ MPAEW PH W+G+P E DDA FA A K E V VCA+
Sbjct: 3 FHMPAEWAPHEWTWIGFPTSAEEWPGAFDDARRQIAQFASALHAGGKGEEVRLVCANEGD 62
Query: 71 WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
+ AR+ +P + ++ + W RDT P V + + A +D+ FN WGG
Sbjct: 63 ADIARALVPPGVAIVVQKLGDVWLRDTAPIAV---------KRGKERALVDFGFNGWGGK 113
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
YR D + ++ +T LP + V EGG++ DG G +TTE+CLLN NRNP
Sbjct: 114 ----YR-MPGDEDIGARLAATTGLPISTQNWVFEGGAVDTDGTGLFVTTEQCLLNPNRNP 168
Query: 191 HLTKGQIENELKAYLGVMKIIWLPRGLFGMIHD---------------------GEAKPR 229
L +G+IE L LG+ ++WL GL D GE P
Sbjct: 169 ELDRGKIETLLAGSLGLSDMLWLGDGLLNDHTDGHVDNLARFVAPGVLALPEASGEDDPN 228
Query: 230 ----------------------------LAGTRLAASYVNFYIANGGIITPQFGDKKWDG 261
+ G + ASY+NFYI N +I P +G + D
Sbjct: 229 AAVYADARARARAFGVDVAPIPSPGRVIVDGEAIPASYMNFYIGNAAVIVPVYG-RPNDQ 287
Query: 262 EAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
A+ L FP E+VG+ R+ I+ GGG+ HC +QQ P+
Sbjct: 288 AALDALKPFFPGREIVGL-RSDAILSGGGSFHCCSQQMPS 326
>gi|89255909|ref|YP_513271.1| hypothetical protein FTL_0502 [Francisella tularensis subsp.
holarctica LVS]
gi|254367269|ref|ZP_04983297.1| hypothetical protein FTHG_00479 [Francisella tularensis subsp.
holarctica 257]
gi|422938368|ref|YP_007011515.1| hypothetical protein FTS_0503 [Francisella tularensis subsp.
holarctica FSC200]
gi|423050237|ref|YP_007008671.1| hypothetical protein F92_02725 [Francisella tularensis subsp.
holarctica F92]
gi|89143740|emb|CAJ78942.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica LVS]
gi|134253087|gb|EBA52181.1| hypothetical protein FTHG_00479 [Francisella tularensis subsp.
holarctica 257]
gi|407293519|gb|AFT92425.1| hypothetical protein FTS_0503 [Francisella tularensis subsp.
holarctica FSC200]
gi|421950959|gb|AFX70208.1| hypothetical protein F92_02725 [Francisella tularensis subsp.
holarctica F92]
Length = 286
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 141/296 (47%), Gaps = 69/296 (23%)
Query: 13 LMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWE 72
L PAEWE HS WM WP R +D W + A ++AKVA I+K+EPV + + Q +
Sbjct: 3 LWPAEWEEHSATWMIWPAR---IDMWPN-ITKAYEIYAKVANTIAKYEPVNMVVNQHQLD 58
Query: 73 NARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDD 132
A++ L +NI +I ++ SW RD P +A K+ +++FN W
Sbjct: 59 IAKNYLVKNITLISEVVDDSWARDIMPIF---------SFKADKLIANNFDFNCWSNK-- 107
Query: 133 GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
+ + D ++ I ++ M+LEGG++H +G+G LTT+ECLLN NRNP++
Sbjct: 108 --FSPFDNDRRLKNDIAKQQKWQVNSSKMILEGGAVHSNGQGVLLTTKECLLNLNRNPNM 165
Query: 193 TKGQIENELKAYLGVMKIIWLPRGLFGMIH-DGEA------------------------- 226
K QIE+EL + LGV KI+WLP G+ G DG
Sbjct: 166 QKEQIESELISILGVKKILWLPYGVAGDFDTDGHVDNVACFANKNTIIIQSCYDENDENF 225
Query: 227 -----------------------KPR---LAGTRLAASYVNFYIANGGIITPQFGD 256
+PR AG RLA SY+NFYI N II P FGD
Sbjct: 226 ARHQANMTYLDKYASEFNIVEIPQPRAQYFAGERLALSYLNFYIVNNAIIMPAFGD 281
>gi|357388904|ref|YP_004903743.1| putative agmatine deiminase [Kitasatospora setae KM-6054]
gi|311895379|dbj|BAJ27787.1| putative agmatine deiminase [Kitasatospora setae KM-6054]
Length = 348
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 116/218 (53%), Gaps = 14/218 (6%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRD-DALHAQRVFAKVATAISKF 59
M + TPA G+ MPAEW PH + WM +P D DA A+R +A VA + ++
Sbjct: 1 MSSSPTPAALGFRMPAEWHPHERTWMAFPTANPTFDGAEQLDA--ARRAWAGVANTLVRY 58
Query: 60 EPVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
EPVTV + + E+AR L + +E +N +W RD GP+ +V+ +VA
Sbjct: 59 EPVTVVVNTGESEDARRYLAAGVETVERPLNDAWMRDIGPSFLVDDQG--------EVAA 110
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTT 179
DW FN WG + W D +A + + RF ++ EGG IHVDGEGT L T
Sbjct: 111 ADWVFNGWGA---QSWARWDKDQDIAEHVTELTGVRRFASRLINEGGGIHVDGEGTVLVT 167
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
+ L + RN T+ Q+E EL A+LG K +WLPRGL
Sbjct: 168 DTVQLGEGRNADWTREQVEAELHAHLGTSKAVWLPRGL 205
>gi|421743961|ref|ZP_16181978.1| peptidylarginine deiminase-like enzyme [Streptomyces sp. SM8]
gi|406687648|gb|EKC91652.1| peptidylarginine deiminase-like enzyme [Streptomyces sp. SM8]
Length = 359
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 121/210 (57%), Gaps = 13/210 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNWRDDAL-HAQRVFAKVATAISKFEPVTVCASAA 69
G+ MP EW PH + WM WP + AL A+R +A+VA + +FEPVTV A
Sbjct: 16 GFRMPPEWAPHLRTWMAWPGPNPTFAT--EAALASAERAWAEVARTVRRFEPVTVLAGPG 73
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+ E+AR+ L I V+E ++ +W RD GPT V + A GA+A +DW FN WG
Sbjct: 74 RAEDARALLGPGIEVVERPLDDAWMRDIGPTFV---TRAEDGARA----ALDWTFNGWGA 126
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
+ + W D ++ ++ + +P + +V EGG +HVDGEGT L TE L+ +RN
Sbjct: 127 QE---WARWERDARIGGEVAALAGVPAYRTGLVNEGGGLHVDGEGTVLLTETVQLDPDRN 183
Query: 190 PHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
P LT+ ++E E+ A LG + +WLPRGL G
Sbjct: 184 PGLTRAEVEAEIHAGLGTSRAVWLPRGLTG 213
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ NGG++ F D + D EA + + FP VV ++ AR + GG IHCITQ
Sbjct: 291 SYINHYLCNGGVVLCAFDDPR-DAEAAALFRRLFPDRTVVPVD-ARPVFAAGGGIHCITQ 348
Query: 298 QQPA 301
Q+PA
Sbjct: 349 QEPA 352
>gi|260904640|ref|ZP_05912962.1| hypothetical protein BlinB_04864 [Brevibacterium linens BL2]
Length = 340
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 154/352 (43%), Gaps = 76/352 (21%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAE H + WM +P L + D+A A+R +A VA A S+F PVTV S +Q ++
Sbjct: 1 MPAETAAHDRIWMAFPSSGYALGDTEDEAEAARRTWAAVARATSEFTPVTVVVSTSQTDH 60
Query: 74 ARSQLPENIR----VIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
A L E I V+ ++ +W RD GP+ VV+ + K+ +DW FN WG
Sbjct: 61 AHRHLGEGISHPITVVNAELDDAWMRDIGPSFVVDDNG--------KLHAVDWVFNGWGA 112
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
+ + W D + R + + +P + EGG HVDG+GT L T L+ RN
Sbjct: 113 QE---WATWDHDQHIGRFVANQAGVPILDSQLRNEGGGFHVDGQGTVLATRSVQLDPGRN 169
Query: 190 PHLTKGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIHDGE- 225
P L + +E E +G K+IWL GL FG +IHD
Sbjct: 170 PDLAEADVEAEFARTIGAKKVIWLDHGLYRDNQTFGTRGHVDIVAAMPSPGVVLIHDQRN 229
Query: 226 ------------------------------AKPRLAGTRLAASYVNFYIAN-----GGII 250
A P R +V++ N G+I
Sbjct: 230 PEHPDFEFSQSLKTQFRAETTAEGQPFEVVAIPAPEVLRDDEGWVDYSYVNHLVTNDGVI 289
Query: 251 TPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
F D D EAV VL Q +P +VVG++ ARE+ GG IHCITQQQ +
Sbjct: 290 ACTF-DDPMDAEAVSVLEQVYPGRKVVGVD-ARELYARGGGIHCITQQQATV 339
>gi|359775950|ref|ZP_09279269.1| putative agmatine deiminase [Arthrobacter globiformis NBRC 12137]
gi|359306799|dbj|GAB13098.1| putative agmatine deiminase [Arthrobacter globiformis NBRC 12137]
Length = 372
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/347 (34%), Positives = 161/347 (46%), Gaps = 73/347 (21%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDAL-HAQRVFAKVATAISKFEPVTVCASAAQWE 72
MPAEWE H + WM +P E L A+ +++VA I+++EPVTV A
Sbjct: 30 MPAEWEAHHRTWMAFPPPNETFGPAGSPTLDRAREAWSRVARTIARYEPVTVVADPRDAT 89
Query: 73 NARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDD 132
AR L E IRV+++ ++ +W RD+GPT ++ + VA IDW FN WG +
Sbjct: 90 TAREWLGEGIRVVQVPLDDAWMRDSGPTFTRHQDGS--------VAAIDWVFNGWGAQE- 140
Query: 133 GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
+ WS D VA + + +P S+V EGG IHVDG GT L TE L+ RNP
Sbjct: 141 --WAVWSKDKDVACAVAAEAGVPVRSSSLVNEGGGIHVDGNGTVLLTETVQLDPTRNPGA 198
Query: 193 TKGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIH--DGEAK 227
TK +E E+ LG K IWLPRGL FG ++H D A
Sbjct: 199 TKESVEAEIHNALGTTKAIWLPRGLTRDYDEFGTRGHVDIVATFAGPGTVLLHRQDDPAH 258
Query: 228 PR----------LAGT-------------------RLAASYVNF-YI----ANGGIITPQ 253
P LAG R +V++ YI AN ++
Sbjct: 259 PDYEICRELHAVLAGELDAHDRPLRIIAVPAPTVLRDDEGFVDWSYINHYVANNVVVLCA 318
Query: 254 FGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
F D D A +L +A+P V ++ AR+I GG IHCITQQQP
Sbjct: 319 FDDPN-DAIAAGILERAYPGRTVELVD-ARDIFAFGGGIHCITQQQP 363
>gi|325265254|ref|ZP_08131979.1| agmatine deiminase [Clostridium sp. D5]
gi|324029433|gb|EGB90723.1| agmatine deiminase [Clostridium sp. D5]
Length = 370
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP GY MPAE+ H+ + WPVR +W D +A+ F + S E V +
Sbjct: 7 TPRKDGYYMPAEFASHAASILIWPVR---PGSWGRDPENARAAFLNIIREASVSEKVYLL 63
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A E AR V+ M + +W RD PT V N V GI W FN
Sbjct: 64 ADREHEEEARRAAGRYAEVLTMDSDDAWARDVAPTFVTNGRC---------VRGISWRFN 114
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHS---MVLEGGSIHVDGEGTCLTTEEC 182
+WGG DG Y W D VA +L +RL + VLEGGSIH DGEGT LTTE C
Sbjct: 115 AWGGEVDGLYASWDKDDAVAEAVL--DRLGYSCYDAGEFVLEGGSIHSDGEGTLLTTESC 172
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
LL++ RNP L++ QIE LK YLG KI+WLPRG++
Sbjct: 173 LLSQGRNPQLSREQIEENLKEYLGAEKILWLPRGIY 208
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 51/74 (68%), Gaps = 3/74 (4%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFG--DKKWDGEAVRVLSQAFPKYEVVGIERAREIV 286
R AG RLAASYVNFY N ++ PQFG +++ D A+ +L P V+GI+ +R ++
Sbjct: 293 REAGERLAASYVNFYFTNDSVLVPQFGGANRESDRRALEILKALCPGRSVIGID-SRAVL 351
Query: 287 LGGGNIHCITQQQP 300
LGGGNIHCITQQ P
Sbjct: 352 LGGGNIHCITQQIP 365
>gi|398883086|ref|ZP_10638046.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM60]
gi|398197343|gb|EJM84323.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM60]
Length = 350
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 117/205 (57%), Gaps = 14/205 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
G+LMPAEW H+ WM WP ++ WR Q+ FA VA AI++FEPV + +
Sbjct: 10 GWLMPAEWVKHAATWMVWPHNQALWESGWRVTLAQVQKDFAGVANAIARFEPVKMVVDPS 69
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+A++ NI +IE+++N SW RD+GP+ + + +AG+ W FN+WGG
Sbjct: 70 AVASAKALCGPNIELIELAVNDSWCRDSGPSFICHPQQG--------LAGVSWRFNAWGG 121
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
LD +AR+ L+ LP F + EGG+IHVDGEGT +TTE LLN NRN
Sbjct: 122 -----KSAHDLDEGLARRALNHLGLPCFGTPLSNEGGAIHVDGEGTLITTESVLLNPNRN 176
Query: 190 PHLTKGQIENELKAYLGVMKIIWLP 214
P +TK ++E LGV K IWLP
Sbjct: 177 PGMTKAEMEEIFTRLLGVKKTIWLP 201
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
ASY NFYIAN II P +G D A VL+QAFP EVV + R + GGG +HC
Sbjct: 281 FCASYTNFYIANDAIIMPAYGIDA-DHVAAEVLAQAFPGREVVQV-RINHLAHGGGGVHC 338
Query: 295 ITQQQPAIPT 304
ITQQQPA P
Sbjct: 339 ITQQQPAWPV 348
>gi|37521250|ref|NP_924627.1| hypothetical protein glr1681 [Gloeobacter violaceus PCC 7421]
gi|35212246|dbj|BAC89622.1| glr1681 [Gloeobacter violaceus PCC 7421]
Length = 349
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/364 (33%), Positives = 157/364 (43%), Gaps = 90/364 (24%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G++ PAEW+PHS CW+ WP E W+ D AQ FA + I+ +P +
Sbjct: 3 TPLSDGFIQPAEWQPHSACWLAWPSDAEL---WQSDLPKAQVEFAGLCRTIADPDPQS-- 57
Query: 66 ASAAQWENARSQLPE--------------NIRVIEMSMNGSWFRDTGPTIVVNKSSASSG 111
+ E + +P+ R + W RDT P + A
Sbjct: 58 -GLPRGEYLKILVPDAEAERAARLALEGLGARFHRIRFGDIWLRDTAPIFLTGPCRA--- 113
Query: 112 AQAPKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVD 171
+A + + FN WGG D +VA + +T LP + VLEGGS+ VD
Sbjct: 114 -----LAAVRFAFNGWGG-----KYVLDHDTEVAAAVAATADLPTYSFPWVLEGGSVEVD 163
Query: 172 GEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG------- 224
GEGTCLTT +CLLN NRNP + IE LK LGV K++WL GL DG
Sbjct: 164 GEGTCLTTRQCLLNPNRNPGMDSKAIEQGLKEALGVRKVLWLDEGLLNDHTDGHIDTIAR 223
Query: 225 ----------EAKP-------------RLAGTRLAA------------------------ 237
+A P LAG AA
Sbjct: 224 FAAPGVVVCMQAAPDDPNAPVLDNIAATLAGFTDAAGRMLTVVRVPSPGRVVDDNGEVMP 283
Query: 238 -SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCIT 296
SYVNFYIAN + P +G + D AV ++ FP VG+ AR I+LGGG HCIT
Sbjct: 284 ASYVNFYIANRTVAVPTYGAPQ-DAAAVSAIAALFPGRRTVGLP-ARTILLGGGAFHCIT 341
Query: 297 QQQP 300
QQQP
Sbjct: 342 QQQP 345
>gi|398877213|ref|ZP_10632361.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM67]
gi|398202940|gb|EJM89772.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM67]
Length = 350
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 117/205 (57%), Gaps = 14/205 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
G+LMPAEW H+ WM WP ++ WR Q+ FA VA AI++FEPV + +
Sbjct: 10 GWLMPAEWVKHAATWMVWPHNQALWESGWRVTLAQVQKDFAGVANAIARFEPVKMVVDPS 69
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+A++ NI +IE+++N SW RD+GP+ V + +AG+ W FN+WGG
Sbjct: 70 AVASAKALCGPNIELIELAVNDSWCRDSGPSFVCHPQQG--------LAGVSWRFNAWGG 121
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
LD +AR+ L+ LP F + EGG+IHVDGEGT +TTE LLN NRN
Sbjct: 122 -----KSAHDLDEGLARRALNHLGLPCFGTPLSNEGGAIHVDGEGTLITTESVLLNPNRN 176
Query: 190 PHLTKGQIENELKAYLGVMKIIWLP 214
P +TK ++E LGV K IWLP
Sbjct: 177 PGMTKTEMEEIFTRLLGVKKTIWLP 201
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
ASY NFYIAN II P +G D A VL+QAFP EVV + R + GGG +HC
Sbjct: 281 FCASYTNFYIANDAIIMPAYGIDA-DHAAAEVLAQAFPGREVVPV-RINHLAHGGGGVHC 338
Query: 295 ITQQQPAIPT 304
ITQQQPA P
Sbjct: 339 ITQQQPAWPV 348
>gi|398920796|ref|ZP_10659508.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM49]
gi|398167387|gb|EJM55452.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM49]
Length = 350
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 116/205 (56%), Gaps = 14/205 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
G++MPAEW H+ WM WP ++ WR Q FA+VA AI++FEPV + +
Sbjct: 10 GWMMPAEWVTHAATWMVWPHNKTLWESGWRVTLPQVQEDFARVANAIARFEPVKLVVDPS 69
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
A++ NI +IE+++N SW RD+GP+ V + VAG+ W FN+WGG
Sbjct: 70 AVAGAKALCGPNIELIELAVNDSWCRDSGPSFVCHPQQG--------VAGVSWRFNAWGG 121
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
LD +AR+ L+ L F ++ EGG+IHVDGEGT +TTE LLN NRN
Sbjct: 122 -----KSAHDLDESLARRALNHLGLECFGTALSNEGGAIHVDGEGTLITTESVLLNPNRN 176
Query: 190 PHLTKGQIENELKAYLGVMKIIWLP 214
P +TK +IE LGV K IWLP
Sbjct: 177 PGVTKAEIEEIFSRLLGVKKTIWLP 201
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
ASY NFYIANG II P +G D A VL+QAFP EVV + R + GGG +HC
Sbjct: 281 FCASYTNFYIANGAIIMPAYGIDA-DNVAAEVLAQAFPGREVVPV-RINHLAHGGGGVHC 338
Query: 295 ITQQQPAIPT 304
ITQQQPA P
Sbjct: 339 ITQQQPAWPV 348
>gi|418021286|ref|ZP_12660400.1| Peptidylarginine deiminase [Candidatus Regiella insecticola R5.15]
gi|347603360|gb|EGY28211.1| Peptidylarginine deiminase [Candidatus Regiella insecticola R5.15]
Length = 338
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 156/346 (45%), Gaps = 76/346 (21%)
Query: 13 LMPAEWEPHSQCWMGWPVRYERLDNW-RDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
MPAE H + WM + V +W R Q+ A VA AI+K+EPVT+ + +
Sbjct: 9 FMPAEESDHLRTWMAFDVN----QSWGRRYLAETQKNIADVALAIAKYEPVTMLVNKENY 64
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
A+ + + +I ++ W RDTGP V + Q + A ID+NFN WG
Sbjct: 65 ATAQKLMGSEVELIIHPLDDVWMRDTGPVFVFD--------QQHRKAAIDFNFNGWGN-- 114
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ D +VA I+ ++LEGG+I VDG+GT + TE C++N NRN
Sbjct: 115 ---KQKHDRDAKVASFIIEKSGAELIKTRLILEGGAIVVDGDGTAIFTESCIINSNRNLG 171
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG--------------------------- 224
+ K + ENELK LG+ +IIWLP I DG
Sbjct: 172 INKTECENELKRLLGLEEIIWLPGIRDQDITDGHTDGYVKFVKPGMVVAGYESDPLSYDY 231
Query: 225 --------------EAKPRL-------AGTRLAASYV--NFY-------IANGGIITPQF 254
+AK R A ++ YV NF+ + N +I P+F
Sbjct: 232 QITQCHLDILRKAVDAKGRKLDVITLEAPRKIRQKYVSDNFFASFINYYVCNNAVIMPEF 291
Query: 255 GDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
GD+K D A L + +PK ++V I I +GGG IHC+TQQ+P
Sbjct: 292 GDEKADKAAAEKLEELYPKRDIVMI-NIDAIAIGGGGIHCLTQQEP 336
>gi|453067866|ref|ZP_21971151.1| hypothetical protein G418_04538 [Rhodococcus qingshengii BKS 20-40]
gi|452766485|gb|EME24730.1| hypothetical protein G418_04538 [Rhodococcus qingshengii BKS 20-40]
Length = 341
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/347 (33%), Positives = 160/347 (46%), Gaps = 72/347 (20%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAE EPH + WM +P L + ++ A+ +A VA A+++FEPVTV A+ E
Sbjct: 5 MPAESEPHERTWMAYPSAGYSLGDTAEEQHEARSTWAAVAHAVAEFEPVTVVVDPAEVEE 64
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
AR L E + ++E +N +W RD GPT V++ ++ G+DW FN WG D
Sbjct: 65 ARKYLSEKVDIVEAPLNDAWMRDIGPTFVLSDEG--------RLGGVDWVFNGWGAQD-- 114
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ W D ++ ++ +V EGG I VDG GT L TE L+ RNP LT
Sbjct: 115 -WAQWDKDSKIGAFVVEQSGAQLIDSPIVNEGGGIAVDGLGTVLVTETVQLDPGRNPDLT 173
Query: 194 KGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIHDG------ 224
K IE EL +G +IWLPRGL +G ++HD
Sbjct: 174 KADIEAELARTIGAKHVIWLPRGLTRDQETYGTRGHVDIVAAISSPGVVLVHDQRNPVHP 233
Query: 225 ------------EAKPRLAG-------------TRLAASYVNF-YI----ANGGIITPQF 254
E+ + G R +V++ YI N G+I F
Sbjct: 234 DYAVSKTIIELFESSTDVGGRPWKVIRVPAPEILRDDEGFVDYSYINHLVVNRGVIACSF 293
Query: 255 GDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
D D EA R+L+ A+P VV ++ AR + GG IHCITQ QPA
Sbjct: 294 DDPA-DAEAARILAAAYPGRTVVTVD-ARPLFERGGGIHCITQHQPA 338
>gi|389576280|ref|ZP_10166308.1| agmatine deiminase [Eubacterium cellulosolvens 6]
gi|389311765|gb|EIM56698.1| agmatine deiminase [Eubacterium cellulosolvens 6]
Length = 375
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/219 (40%), Positives = 126/219 (57%), Gaps = 19/219 (8%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
PA GY MP E+E H+ ++ WPVR +W + A VFA++A IS+ E + +
Sbjct: 12 PAKDGYHMPGEFENHAGTFLIWPVR---PGSWTNGGREAAPVFARLAAEISQTEHLYLLV 68
Query: 67 SAAQWENARSQL------PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
A ++A +Q+ PE I +++ + +W RD GPT V N A V G+
Sbjct: 69 DAEHRKSAEAQIRLVCEKPE-ITFLDIPTDDAWARDVGPTFVRNA--------AGDVRGV 119
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTT 179
W FN+WGG DG Y+D++ D A ++ L + VLEGGSIH DGEGT + T
Sbjct: 120 SWKFNAWGGDYDGLYQDYARDDAAAERMCEALGLSCYDAGDFVLEGGSIHSDGEGTVVVT 179
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
E CLL+K RNP +TK +IE++LK +LG K+IWLP G++
Sbjct: 180 EACLLSKGRNPSMTKREIEDKLKDWLGAEKVIWLPSGIY 218
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R G RLAASYVNFYI NG ++ PQFGD D EAVR+LS+AFP EV+ + AR I++G
Sbjct: 303 REEGERLAASYVNFYICNGKVLVPQFGDPA-DEEAVRILSEAFPDREVIPV-YARAILVG 360
Query: 289 GGNIHCITQQQP 300
GGNIHCITQQ P
Sbjct: 361 GGNIHCITQQIP 372
>gi|291454333|ref|ZP_06593723.1| agmatine deiminase [Streptomyces albus J1074]
gi|291357282|gb|EFE84184.1| agmatine deiminase [Streptomyces albus J1074]
Length = 351
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 120/210 (57%), Gaps = 13/210 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNWRDDAL-HAQRVFAKVATAISKFEPVTVCASAA 69
G+ MP EW PH + WM WP + AL A+R +A+VA + +FEPVTV A
Sbjct: 8 GFRMPPEWAPHLRTWMAWPGPNPTFAT--EAALASAERAWAEVARTVRRFEPVTVLAGPG 65
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+ E AR+ L I V+E ++ +W RD GPT V + A GA+A +DW FN WG
Sbjct: 66 RAEGARALLGPGIEVVERPLDDAWMRDIGPTFV---TRAEDGARAV----LDWTFNGWGA 118
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
+ + W D ++ ++ + +P + +V EGG +HVDGEGT L TE L+ +RN
Sbjct: 119 QE---WARWERDARIGGEVAALAGVPAYRTGLVNEGGGLHVDGEGTVLLTETVQLDPDRN 175
Query: 190 PHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
P LT+ ++E E+ A LG + +WLPRGL G
Sbjct: 176 PGLTRAEVEAEIHAGLGTSRAVWLPRGLTG 205
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ NGG++ F D + D EA + + FP VV ++ AR + GG IHCITQ
Sbjct: 283 SYINHYLCNGGVVLCAFDDPR-DAEAAALFRRLFPDRTVVPVD-ARPVFAAGGGIHCITQ 340
Query: 298 QQPA 301
Q+PA
Sbjct: 341 QEPA 344
>gi|290957169|ref|YP_003488351.1| hypothetical protein SCAB_26891 [Streptomyces scabiei 87.22]
gi|260646695|emb|CBG69792.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 348
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 115/214 (53%), Gaps = 13/214 (6%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TPA G+ MP EW PH + WM WP ++ D A A+ +A VA A+ +FEPVTV
Sbjct: 3 TPAADGFRMPPEWAPHERTWMAWPGPNPTFEDPVDLA-EARLAWATVARAVRRFEPVTVV 61
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
Q AR+ L E++ +E ++ +W RD GPT + N ++A +DW FN
Sbjct: 62 CGPGQSRQARALLGEDVDTVERPLDDAWMRDIGPTFLTNGR---------ELAAVDWTFN 112
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
WG + W D ++A ++ + +V EGG+IHVDGEGT L TE L
Sbjct: 113 GWGAQP---WARWEHDAEIAGQVADLAGARTYTSKLVNEGGAIHVDGEGTVLLTETVQLG 169
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
RNP T+ + E E+ A+LG + IWLPRGL G
Sbjct: 170 PERNPGWTREEAEAEIHAHLGTSRAIWLPRGLTG 203
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ NGG++ F D + D A + + FP+ V ++ AR + GGG IHC+TQ
Sbjct: 283 SYINHYLCNGGVVLCGFDDPR-DETAAGIFRRLFPERTVTLVD-ARTLFAGGGGIHCVTQ 340
Query: 298 QQP 300
QQP
Sbjct: 341 QQP 343
>gi|398959512|ref|ZP_10678176.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM33]
gi|398145158|gb|EJM33954.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM33]
Length = 350
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 120/215 (55%), Gaps = 15/215 (6%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKF 59
M+ NG G+ MPAEW H+ WM WP ++ WR Q FA+VA AI++F
Sbjct: 1 MQQNGIQN-SGWTMPAEWVTHAATWMVWPHNKALWESGWRVTLPQVQEDFARVANAIARF 59
Query: 60 EPVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
EPV + + +A++ NI +IE+++N SW RD+GP+ V + +AG
Sbjct: 60 EPVKLVVDPSAVASAKALCGPNIELIELAVNDSWCRDSGPSFVCHPQQG--------LAG 111
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTT 179
+ W FNSWGG LD +AR+ L+ L F ++ EGG+IHVDGEGT +TT
Sbjct: 112 VSWRFNSWGG-----KSAHDLDESLARRALNHLGLECFGTALSNEGGAIHVDGEGTLITT 166
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLP 214
E LLN NRNP +TK +IE LGV K IWLP
Sbjct: 167 ESVLLNPNRNPGVTKAEIEEIFTRLLGVKKTIWLP 201
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
ASY NFYIANG +I P +G D A VL+QAFP EVV + R + GGG +HC
Sbjct: 281 FCASYTNFYIANGAVIMPAYGIDA-DKVAAEVLAQAFPGREVVPV-RINHLAHGGGGVHC 338
Query: 295 ITQQQPAIPT 304
ITQQQPA P
Sbjct: 339 ITQQQPAWPV 348
>gi|421162328|ref|ZP_15621203.1| putative peptidylarginine deiminase, partial [Pseudomonas
aeruginosa ATCC 25324]
gi|404536047|gb|EKA45701.1| putative peptidylarginine deiminase, partial [Pseudomonas
aeruginosa ATCC 25324]
Length = 305
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/317 (36%), Positives = 151/317 (47%), Gaps = 73/317 (23%)
Query: 46 QRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNK 105
Q+ FA VA AI++FEPV + A + A N+ +IE++++ SW RD+GP+ V +
Sbjct: 2 QQDFAAVANAIARFEPVKLVVDPAALDRAGELCAGNVELIELAIDDSWCRDSGPSFVCHP 61
Query: 106 SSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEG 165
+AG+ W FN+WGG ++ D +AR+IL L F + EG
Sbjct: 62 QLG--------LAGVSWRFNAWGG-----KSAYAQDASLARRILDGLGLECFGVPLANEG 108
Query: 166 GSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWL---PRGLFGMIH 222
G+IHVDGEGT +TTE LLN NRNP L+K +IE LGV + IWL P + G +
Sbjct: 109 GAIHVDGEGTLITTESVLLNANRNPGLSKAEIEALFARLLGVTRTIWLPGDPDRVTGDMT 168
Query: 223 DGE-------AKP---RLAGTR-------------------------------------- 234
DG A+P L TR
Sbjct: 169 DGHVDGVCAFARPGALLLDATRDTTSAYAEVVRENRRALELALDARGRRFELIELFDAGE 228
Query: 235 -------LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
ASY NFYIANG II P +G D A L++AFP EVV + R +
Sbjct: 229 VAPEEGVFCASYTNFYIANGAIIMPAYGVAADD-AAAATLARAFPAREVVPV-RIDHLAH 286
Query: 288 GGGNIHCITQQQPAIPT 304
GGG +HCITQQQPA P
Sbjct: 287 GGGGVHCITQQQPAWPA 303
>gi|419714936|ref|ZP_14242344.1| putative agmatine deiminase [Mycobacterium abscessus M94]
gi|382944844|gb|EIC69148.1| putative agmatine deiminase [Mycobacterium abscessus M94]
Length = 340
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 152/348 (43%), Gaps = 72/348 (20%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+LMP E + WM +P + + + A A+ +A VA AI FEPV++ A
Sbjct: 3 WLMPPEIAAQERIWMAFPPQGASVFENAESAHEARTAWAAVAHAIIDFEPVSMIVDPADR 62
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
A L I V+E ++ +W RD GPT V +VA +DW FN WG D
Sbjct: 63 AVAPKYLSREIDVVEAPLDDAWMRDIGPTFVRGTDG--------RVAAVDWVFNGWGARD 114
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ W D + R + + S+V EGG I VDGEGT L TE L+ +RNP
Sbjct: 115 ---WARWDNDAHIGRFVGQLAGVEIVSSSLVNEGGGIQVDGEGTVLVTETVQLDPSRNPG 171
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGL------FGM-------------------IHDGEA 226
L + +E EL +G +IWLPRGL FG + + A
Sbjct: 172 LDRHAVEVELARTIGARHVIWLPRGLTRDAERFGTRGHVDILVAIPSPGRLLVHVQNDPA 231
Query: 227 KPRLAGTR-----LAAS-----------------------------YVNFYIANGGIITP 252
P A T+ LA S Y+N + N G+I
Sbjct: 232 HPDHAITKEIVDLLAQSHDANGKVWEITPIPAPAVLRDSESWVDYSYINHLVVNDGVIAC 291
Query: 253 QFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
+FGD D A +L++ +P VV ++ AREI GG IHCITQQQP
Sbjct: 292 RFGDSA-DDAATAILAEEYPGRRVVTVD-AREIFARGGGIHCITQQQP 337
>gi|420873188|ref|ZP_15336565.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0726-RB]
gi|420987116|ref|ZP_15450273.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0206]
gi|421039608|ref|ZP_15502617.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0116-R]
gi|421043545|ref|ZP_15506546.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0116-S]
gi|392072216|gb|EIT98057.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0726-RB]
gi|392185705|gb|EIV11353.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0206]
gi|392224700|gb|EIV50219.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0116-R]
gi|392237397|gb|EIV62891.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0116-S]
Length = 340
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 152/348 (43%), Gaps = 72/348 (20%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+LMP E + WM +P + + + A A+ +A VA AI FEPV++ A
Sbjct: 3 WLMPPETAAQERIWMAFPPQGASVFENAESAHEARTAWAAVAHAIIDFEPVSMIVDPADR 62
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
A L I V+E ++ +W RD GPT V +VA +DW FN WG D
Sbjct: 63 AVAPKYLSREIDVVEAPLDDAWMRDIGPTFVRGTDG--------RVAAVDWVFNGWGARD 114
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ W D + R + + S+V EGG I VDGEGT L TE L+ +RNP
Sbjct: 115 ---WARWDNDAHIGRFVGQLAGVEIVSSSLVNEGGGIQVDGEGTVLVTETVQLDPSRNPG 171
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGL------FGM-------------------IHDGEA 226
L + +E EL +G +IWLPRGL FG + + A
Sbjct: 172 LDRHAVEVELARTIGARHVIWLPRGLTRDAERFGTRGHVDILVAIPSPGRLLVHVQNDPA 231
Query: 227 KPRLAGTR-----LAAS-----------------------------YVNFYIANGGIITP 252
P A T+ LA S Y+N + N G+I
Sbjct: 232 HPDHAITKEIVDLLAQSHDANGKVWEITPIPAPAVLRDSESWVDYSYINHLVVNDGVIAC 291
Query: 253 QFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
+FGD D A +L++ +P VV ++ AREI GG IHCITQQQP
Sbjct: 292 RFGDSA-DDAATAILAEEYPGRRVVTVD-AREIFARGGGIHCITQQQP 337
>gi|398929420|ref|ZP_10663930.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM48]
gi|398167042|gb|EJM55125.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM48]
Length = 350
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 117/205 (57%), Gaps = 14/205 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
G++MPAEW H+ WM WP ++ WR Q FA+VA AI++FEPV + +
Sbjct: 10 GWMMPAEWVTHAATWMVWPHNKTLWESGWRVTLPQVQEDFARVANAIARFEPVKLVVDPS 69
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+A++ NI +IE+++N SW RD+GP+ V + +AG+ W FN+WGG
Sbjct: 70 AVASAKALCGPNIELIELAVNDSWCRDSGPSFVCHPQQG--------LAGVSWRFNAWGG 121
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
LD +AR+ L+ L F ++ EGG+IHVDGEGT +TTE LLN NRN
Sbjct: 122 -----KSAHDLDESLARRALNHLGLECFGTALSNEGGAIHVDGEGTLITTESVLLNPNRN 176
Query: 190 PHLTKGQIENELKAYLGVMKIIWLP 214
P +TK +IE LGV K IWLP
Sbjct: 177 PGVTKAEIEEIFSRLLGVKKTIWLP 201
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
ASY NFYIANG II P +G D A VL++AFP EVV + R + GGG +HC
Sbjct: 281 FCASYTNFYIANGAIIMPAYGIDA-DNVAAEVLARAFPGREVVPV-RINHLAHGGGGVHC 338
Query: 295 ITQQQPAIPT 304
ITQQQPA P
Sbjct: 339 ITQQQPAWPV 348
>gi|398871680|ref|ZP_10626992.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM74]
gi|398205489|gb|EJM92270.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM74]
Length = 350
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 120/215 (55%), Gaps = 15/215 (6%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKF 59
M+ NG G+ MPAEW H+ WM WP ++ WR Q FA+VA AI++F
Sbjct: 1 MQQNGIQN-SGWTMPAEWVTHAATWMVWPHNKTLWESGWRVTLPQVQEDFARVANAIARF 59
Query: 60 EPVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
EPV + + +A++ NI +IE+++N SW RD+GP+ V + +AG
Sbjct: 60 EPVKLVVDPSAIASAKALCGPNIELIELAVNDSWCRDSGPSFVCHPQQG--------LAG 111
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTT 179
+ W FN+WGG LD +AR+ L+ L F ++ EGG+IHVDGEGT +TT
Sbjct: 112 VSWRFNAWGG-----KSAHDLDESLARRALNHLGLECFGTALSNEGGAIHVDGEGTLITT 166
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLP 214
E LLN NRNP +TK +IE LGV K IWLP
Sbjct: 167 ESVLLNPNRNPGVTKAEIEEIFSRLLGVKKTIWLP 201
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
ASY NFYIANG II P +G D A VL+QAFP EVV + R + GGG +HC
Sbjct: 281 FCASYTNFYIANGAIIMPAYGIDA-DKVAAEVLAQAFPGREVVPV-RINHLAHGGGGVHC 338
Query: 295 ITQQQPAIPT 304
ITQQQPA P
Sbjct: 339 ITQQQPAWPV 348
>gi|255530606|ref|YP_003090978.1| Agmatine deiminase [Pedobacter heparinus DSM 2366]
gi|255343590|gb|ACU02916.1| Agmatine deiminase [Pedobacter heparinus DSM 2366]
Length = 349
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 163/365 (44%), Gaps = 82/365 (22%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNW--RDDALHAQRV-FAKVATAIS 57
+ + +P GY PAEW H W+ WP + +W + + ++A F K+
Sbjct: 4 INFSASPKKQGYSFPAEWVKHEATWLSWP---HKEASWPGKIETIYAPYCQFIKIVATAE 60
Query: 58 KFEPVTVCASAAQWENAR--SQLPENIRVIEMSMNGS---WFRDTGPTIVVNKSSASSGA 112
K + V A + E AR + ++ IE N S W RD GP V+N
Sbjct: 61 KVR-INVKDEAMKAEAARHLQEAGADLTQIEFYFNESNDAWCRDHGPAFVLNGREK---- 115
Query: 113 QAPKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDG 172
A +DW +N+WG Y + LD + KI LP + +V+EGGS+ +G
Sbjct: 116 -----AVVDWRYNAWGN----KYPPYDLDDVIPTKIAQHFDLPLYTPDIVMEGGSVEFNG 166
Query: 173 EGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG-------- 224
GT LTT CLLN+NRNP L++ QIE L + G +++WL G+ G DG
Sbjct: 167 AGTILTTTACLLNENRNPELSREQIEQYLLEFYGAEQVLWLGDGIVGDDTDGHIDDITRF 226
Query: 225 ----------EAKP-------------RLAGTRL------------------------AA 237
E+ P L RL A
Sbjct: 227 VNEDTVLTVVESNPLDENYLLLQENLEALKAMRLLNGKPLNIVQLPMPSPVIHEDTRLPA 286
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY NFYIAN +I P F D D +A++++ FP +V+GI+ + +I+ G G+ HC++Q
Sbjct: 287 SYANFYIANAAVIVPTFRDVN-DEKALKIIQDVFPDRKVIGID-STDIIWGLGSFHCLSQ 344
Query: 298 QQPAI 302
Q+PAI
Sbjct: 345 QEPAI 349
>gi|302554353|ref|ZP_07306695.1| agmatine deiminase [Streptomyces viridochromogenes DSM 40736]
gi|302471971|gb|EFL35064.1| agmatine deiminase [Streptomyces viridochromogenes DSM 40736]
Length = 345
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 113/215 (52%), Gaps = 14/215 (6%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRV-FAKVATAISKFEPVTV 64
T A G+ MPAEW PH + WM WP D+ D L A R+ +A VA A+ +FEPVTV
Sbjct: 2 TAAADGFRMPAEWAPHERTWMAWPGPNPTFDDPED--LAAARIAWASVARAVRRFEPVTV 59
Query: 65 CASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
Q A + L +I +E ++ +W RD GPT + N ++A +DW F
Sbjct: 60 VCGPGQTAGAAALLGPDIDTVERELDDAWMRDIGPTFLTNGRG--------ELAAVDWTF 111
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL 184
N WG + W D +VA I + +V EGG+IHVDGEGT L TE L
Sbjct: 112 NGWGAQ---SWARWEHDAKVAAHIADLAGARTYASKLVNEGGAIHVDGEGTVLLTETVQL 168
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
RNP ++ ++E E+ A LG K IWLPRGL G
Sbjct: 169 GPERNPQWSREEVEAEIHAQLGTRKAIWLPRGLTG 203
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ NGG++ F D + D A + + FP+ V ++ AR I GGG IHCITQ
Sbjct: 283 SYINHYLCNGGVVLCGFDDPR-DEIAAGIFRRLFPERTVTLVD-ARTIFAGGGGIHCITQ 340
Query: 298 QQPAI 302
QQP I
Sbjct: 341 QQPKI 345
>gi|169629630|ref|YP_001703279.1| putative agmatine deiminase [Mycobacterium abscessus ATCC 19977]
gi|419708031|ref|ZP_14235502.1| putative agmatine deiminase [Mycobacterium abscessus M93]
gi|420910140|ref|ZP_15373452.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0125-R]
gi|420916594|ref|ZP_15379898.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0125-S]
gi|420921759|ref|ZP_15385056.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0728-S]
gi|420927420|ref|ZP_15390702.1| putative agmatine deiminase [Mycobacterium abscessus 6G-1108]
gi|420966920|ref|ZP_15430125.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0810-R]
gi|420977760|ref|ZP_15440938.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0212]
gi|420983141|ref|ZP_15446310.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0728-R]
gi|421013063|ref|ZP_15476146.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0122-R]
gi|421017967|ref|ZP_15481027.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0122-S]
gi|421023261|ref|ZP_15486308.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0731]
gi|421028946|ref|ZP_15491980.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0930-R]
gi|169241597|emb|CAM62625.1| Putative agmatine deiminase [Mycobacterium abscessus]
gi|382944670|gb|EIC68976.1| putative agmatine deiminase [Mycobacterium abscessus M93]
gi|392112134|gb|EIU37903.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0125-R]
gi|392120734|gb|EIU46500.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0125-S]
gi|392131595|gb|EIU57341.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0728-S]
gi|392134653|gb|EIU60394.1| putative agmatine deiminase [Mycobacterium abscessus 6G-1108]
gi|392166034|gb|EIU91719.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0212]
gi|392172621|gb|EIU98292.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0728-R]
gi|392203945|gb|EIV29536.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0122-R]
gi|392210753|gb|EIV36320.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0122-S]
gi|392214230|gb|EIV39782.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0731]
gi|392228451|gb|EIV53963.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0930-R]
gi|392252361|gb|EIV77830.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0810-R]
Length = 340
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 151/348 (43%), Gaps = 72/348 (20%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+LMP E + WM +P + + + A A+ +A VA AI FEPV++ A
Sbjct: 3 WLMPPETAAQERIWMAFPPQGASVFENAESAHEARTAWAAVAHAIIDFEPVSMIVDPADR 62
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
A L I V+E ++ +W RD GPT V +VA +DW FN WG D
Sbjct: 63 AVAPKYLSREIDVVEAPLDDAWMRDIGPTFVRGTDG--------RVAAVDWVFNGWGARD 114
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ W D + R + + S+V EGG I VDGEGT L TE L+ +RNP
Sbjct: 115 ---WARWDNDAHIGRFVGQLAGVEIVSSSLVNEGGGIQVDGEGTVLVTETVQLDPSRNPG 171
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGL------FGM-------------------IHDGEA 226
L + +E EL +G +IWLPRGL FG + + A
Sbjct: 172 LDRHAVEVELARTIGARHVIWLPRGLTRDAERFGTRGHVDILVAIPSPGRLLVHVQNDPA 231
Query: 227 KPRLAGTR-----LAAS-----------------------------YVNFYIANGGIITP 252
P A T+ LA S Y+N + N G+I
Sbjct: 232 HPDHAITKEIVDLLAQSHDVNGKVWEITPIPAPAVLRDSESWVDYSYINHLVVNDGVIAC 291
Query: 253 QFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
+FGD D A +L+ +P VV ++ AREI GG IHCITQQQP
Sbjct: 292 RFGDSA-DDAATAILADEYPGRRVVTVD-AREIFARGGGIHCITQQQP 337
>gi|359148806|ref|ZP_09181897.1| putative agmatine deiminase [Streptomyces sp. S4]
Length = 359
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 119/210 (56%), Gaps = 13/210 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNWRDDAL-HAQRVFAKVATAISKFEPVTVCASAA 69
G+ MP EW PH + WM WP + AL A+R +A+VA + +FEPVTV A
Sbjct: 16 GFRMPPEWAPHLRTWMAWPGPNPTFAT--EAALASAERAWAEVARTVRRFEPVTVLAGPG 73
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+ AR+ L I V+E ++ +W RD GPT V + A GA+A +DW FN WG
Sbjct: 74 RAAGARALLGPGIDVVERPLDDAWMRDIGPTFV---TRAEDGARA----ALDWTFNGWGA 126
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
+ + W D ++ ++ + +P + +V EGG +HVDGEGT L TE L+ +RN
Sbjct: 127 QE---WARWERDARIGGEVAALAGVPAYRTGLVNEGGGLHVDGEGTVLLTETVQLDPDRN 183
Query: 190 PHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
P LT+ ++E E+ A LG + +WLPRGL G
Sbjct: 184 PGLTRAEVEAEIHAGLGTSRAVWLPRGLTG 213
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ NGG++ F D + D EA + + FP VV ++ AR + GG IHCITQ
Sbjct: 291 SYINHYLCNGGVVLCAFDDPR-DAEAAALFRRLFPDRAVVPVD-ARPVFAVGGGIHCITQ 348
Query: 298 QQPA 301
Q+PA
Sbjct: 349 QEPA 352
>gi|291520961|emb|CBK79254.1| agmatine deiminase [Coprococcus catus GD/7]
Length = 388
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 120/228 (52%), Gaps = 28/228 (12%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
P+ GY MPAE+ H C + WP +R +W+ + A+R F V AI++ E V +
Sbjct: 8 PSADGYHMPAEYACHKGCILIWP---QRPGSWKKNPEAAERAFCAVMQAIAESEAVYLAC 64
Query: 67 SAAQWENARS-----------QLPEN----IRVIEMSMNGSWFRDTGPTIVVNKSSASSG 111
A A++ ++ E + V E+ + +W RD GPT VV +
Sbjct: 65 GKAALPRAKAFADAHNRQFQREISEKKHFPVVVFEVETDDAWARDIGPTFVVKNDT---- 120
Query: 112 AQAPKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHS-MVLEGGSIHV 170
V GI W FN+WGG +DG Y W D A E + S VLEGGSIH
Sbjct: 121 -----VRGISWTFNAWGGEEDGLYASWQKDDAFAEAFAKREGYVCYDASPFVLEGGSIHS 175
Query: 171 DGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
DGEGT + TE CLL++ RNP L+K +IE +L+ +LG K++WLPRG++
Sbjct: 176 DGEGTVMVTESCLLSRGRNPQLSKAEIEEKLRQFLGAEKVLWLPRGIY 223
>gi|297191870|ref|ZP_06909268.1| agmatine deiminase [Streptomyces pristinaespiralis ATCC 25486]
gi|197723217|gb|EDY67125.1| agmatine deiminase [Streptomyces pristinaespiralis ATCC 25486]
Length = 338
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 114/208 (54%), Gaps = 13/208 (6%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+ MPAEW PH + WM WP + + A+ +A VA A+ FEPVTV A Q
Sbjct: 3 FRMPAEWAPHERTWMAWPGPNPTFTD-EAELAEARAAWASVARAVRHFEPVTVVAGTGQV 61
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
+AR L +I ++E ++ +W RD GPT V + S ++A +DW FN WG +
Sbjct: 62 ASARELLGPDIEIVERDLDDAWMRDIGPTFVTDGS---------RLAAVDWVFNGWGAAE 112
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ W D ++AR + +P P +V EGG+IHVDGEGT L T+ L RNP
Sbjct: 113 ---WARWEHDAKIARHVADLAGVPVHPSPLVNEGGAIHVDGEGTVLLTDTVQLGPERNPG 169
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGLFG 219
T+ ++E E+ A LG K IWLPRGL G
Sbjct: 170 WTRAEVEAEIHARLGTTKAIWLPRGLSG 197
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ NGG++ F D + D A + + FP+ V ++ AR I GGG IHCITQ
Sbjct: 276 SYINHYLCNGGLVLCAFDDPR-DEIAAGIFRRLFPERTVTLVD-ARAIFAGGGGIHCITQ 333
Query: 298 QQPAI 302
QQP +
Sbjct: 334 QQPRV 338
>gi|167035614|ref|YP_001670845.1| agmatine deiminase [Pseudomonas putida GB-1]
gi|166862102|gb|ABZ00510.1| Agmatine deiminase [Pseudomonas putida GB-1]
Length = 346
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 116/205 (56%), Gaps = 14/205 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
G+ MPAEW H+ WM WP ++ W Q+ +A+VA AI++FEPV + +
Sbjct: 8 GWRMPAEWARHAATWMVWPHNQAVWESGWHVRLADVQQDYARVAAAIARFEPVKMVVDPS 67
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+AR+ NI +IE++++ SW RD+GP+ V + +AG+ W FN+WGG
Sbjct: 68 AMASARALCGANIELIELAVDDSWCRDSGPSFVCHPQHG--------LAGLSWRFNAWGG 119
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
SLD + R++L L F S+ EGG+IHVDGEGT +TTE LLN NRN
Sbjct: 120 KSHH-----SLDRSLGRRMLDQLGLDGFSTSLCNEGGAIHVDGEGTLITTESVLLNPNRN 174
Query: 190 PHLTKGQIENELKAYLGVMKIIWLP 214
P ++K + E YLG+ K IWLP
Sbjct: 175 PGISKAEFEACFARYLGISKTIWLP 199
>gi|189347206|ref|YP_001943735.1| Agmatine deiminase [Chlorobium limicola DSM 245]
gi|189341353|gb|ACD90756.1| Agmatine deiminase [Chlorobium limicola DSM 245]
Length = 349
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 159/354 (44%), Gaps = 79/354 (22%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
Y MP EW PH W+ WP +L++W VFA++A +S E V +
Sbjct: 6 YTMPPEWAPHKATWLSWP---HKLESWPGKFEPVPFVFAEIAAWLSTSEEVHINVLDDDM 62
Query: 72 E-NARSQL---PENIRVIE------MSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
NAR + P V++ + N +W RD GP V + KV ++
Sbjct: 63 AGNARELIGADPHAEAVMDRIFFHCIPTNDAWCRDHGPNYVF----LHEDERMEKVI-VN 117
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
W +N+WGG Y + D V ++ + +RL MVLEGG+I V+G+G LTTE
Sbjct: 118 WEYNAWGGK----YEPYDDDNAVPERVGTLQRLRVVSTGMVLEGGAIDVNGKGLLLTTEA 173
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG----------------- 224
CLLN NRNP +++ +IE EL YLG K+IWL G+ G DG
Sbjct: 174 CLLNPNRNPEMSRPEIEGELLKYLGARKVIWLGEGIAGDDTDGHVDDMSRFVNERTVVTA 233
Query: 225 --------------------------EAKP------------RLAGTRLAASYVNFYIAN 246
E +P G RL ASY NFYIAN
Sbjct: 234 VEDDPEDENYFPLKENYERLKKCTDLEGRPLQIIRLPMPEPVYFEGERLPASYANFYIAN 293
Query: 247 GGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
++ P + + D A+ +L + FP +VVGI+ +++ G G IHCIT ++P
Sbjct: 294 SVVLVPIYRSSR-DRIALDLLQECFPDRKVVGID-CSDLIWGLGAIHCITHEEP 345
>gi|347531366|ref|YP_004838129.1| hypothetical protein RHOM_05390 [Roseburia hominis A2-183]
gi|345501514|gb|AEN96197.1| hypothetical protein RHOM_05390 [Roseburia hominis A2-183]
Length = 402
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 122/221 (55%), Gaps = 19/221 (8%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP E+EPH C + WP R +W A A+ F V AI++ E V V
Sbjct: 23 TPQADGFFMPGEYEPHDGCILIWP---SRPGSWIYGARDARIAFRDVIAAIAQSENVYVA 79
Query: 66 ASAAQWENARSQL-------PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVA 118
A ++AR L + + V E+ + +W RD PT V + A ++
Sbjct: 80 AGRDAIDSAREMLIGEDAPWKKRVTVFELETDDAWARDVAPTFVKDG--------AGRMR 131
Query: 119 GIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHS-MVLEGGSIHVDGEGTCL 177
++W+FN+WGG DG Y W+LD A+ + + + VLEGGSIH DGEGT L
Sbjct: 132 AVNWSFNAWGGSVDGLYASWALDDAFAKAFAAKYGYACYDAAPFVLEGGSIHSDGEGTLL 191
Query: 178 TTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
TE CLL+ RNP LT+G+IE +L+ YLG+ K++WLPRG++
Sbjct: 192 VTEACLLSAGRNPGLTRGEIEEKLRTYLGIEKVLWLPRGIY 232
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFG--DKKWDGEAVRVLSQAFPKYEVVGIERAREIV 286
R AG RLAASYVNFY +N +I P FG +++ D A +L+Q P +++ ++ AR I+
Sbjct: 317 REAGERLAASYVNFYFSNEAVILPAFGGENEESDRRAAALLAQWNPGRKIISVQ-ARAIL 375
Query: 287 LGGGNIHCITQQQPA 301
+GGGNIHCITQQ PA
Sbjct: 376 VGGGNIHCITQQIPA 390
>gi|383755117|ref|YP_005434020.1| agmatine deiminase [Selenomonas ruminantium subsp. lactilytica
TAM6421]
gi|73622172|sp|Q5KR05.1|AGUA_SELRU RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|57506773|dbj|BAD86640.1| putative agmatine deiminase [Selenomonas ruminantium]
gi|381367169|dbj|BAL83997.1| agmatine deiminase [Selenomonas ruminantium subsp. lactilytica
TAM6421]
Length = 371
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/222 (39%), Positives = 121/222 (54%), Gaps = 16/222 (7%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M + TP G+ MPAE+ PH+ ++ WPVR +W + Q VF ++ IS E
Sbjct: 2 MIKDSTPKADGFYMPAEFSPHAGTFLIWPVR---PGSWTNAGADVQPVFVELIREISAVE 58
Query: 61 PVTVCASAA---QWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPK 116
+ + A Q EN LP+ +I + + + +W RD GPT V++ +
Sbjct: 59 ELYLLVDEAHRPQAENMLKDLPQQHIHYLAIPTDDAWARDMGPTYVIDGQG--------R 110
Query: 117 VAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGT 175
GI+W FN+WGG DG Y D+ D A K+ + + VLEGGSIHVDGEGT
Sbjct: 111 RRGINWRFNAWGGDFDGLYPDYGQDDAAAEKMCAALGDELYDAGDFVLEGGSIHVDGEGT 170
Query: 176 CLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
+ TE CLL++ RNP L+K QIE L YLG K+IWLPRG+
Sbjct: 171 VVVTEACLLSQGRNPDLSKEQIEAMLLKYLGAEKVIWLPRGI 212
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
+GE + R G RLAASYVNFY+ NG +I PQFGD + D EA R+L + FP+ +VV +
Sbjct: 291 FEEGEDR-REPGERLAASYVNFYLCNGKVILPQFGD-EMDIEAQRILGKCFPERKVVPLP 348
Query: 281 RAREIVLGGGNIHCITQQQPAI 302
A+ +++GGGN HC+TQQ PAI
Sbjct: 349 -AKAVIVGGGNFHCLTQQIPAI 369
>gi|225873362|ref|YP_002754821.1| peptidyl-arginine deiminase family protein [Acidobacterium
capsulatum ATCC 51196]
gi|225794207|gb|ACO34297.1| peptidyl-arginine deiminase family protein [Acidobacterium
capsulatum ATCC 51196]
Length = 368
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 164/377 (43%), Gaps = 89/377 (23%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M+GTP Y MPAEWE H+ W+ WP ++W V+A + +S+ E V
Sbjct: 1 MSGTPREQDYRMPAEWERHAATWIAWP---RNPNDWPGKFQPIPWVYADIVRHLSRVEIV 57
Query: 63 TVCASAAQWENARSQLPE-------NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQA- 114
+ A+ E S + + N+R+ N W RD+GP V AS +QA
Sbjct: 58 HILVHDAEAERRASGILKRAGANLTNVRLHRWPTNRVWTRDSGPIFVKKTGKASGKSQAK 117
Query: 115 -----PKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP---------HS 160
+A +W FN+W Y DW LD Q+ ++ + LP + H
Sbjct: 118 AQEKESSLAVTNWKFNAWAK-----YPDWQLDDQIPVRVANLLGLPCWSPAIKTGAGMHE 172
Query: 161 MVLEGGSIHVDGEGTCLTTEECLLN--KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
+VLEGGSI +G G LTTEECLL+ + RNP ++K Q+E YLG+ +++WL RG
Sbjct: 173 LVLEGGSIDGNGAGILLTTEECLLSEVQQRNPGVSKSQLEKAFHDYLGIEQVVWLHRGTA 232
Query: 219 GMIHDG-------------------------------------------EAKPRLAGTRL 235
G G E KP T
Sbjct: 233 GDDTHGHVDDITRFVNTNTIVTAVEQNLNDENHLPLAENLDRLRAARNLEGKPFQIVTLP 292
Query: 236 AASYVNF------------YIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAR 283
S V F YIANG ++ P F D D +A+ +L++ FP++ V GI
Sbjct: 293 MPSPVVFEGQRLPASYANFYIANGLVLVPTFNDPN-DRKALNILAEVFPEHSVTGIH-CG 350
Query: 284 EIVLGGGNIHCITQQQP 300
+ + G G +HC+TQQQP
Sbjct: 351 DFIWGLGALHCMTQQQP 367
>gi|224542280|ref|ZP_03682819.1| hypothetical protein CATMIT_01455 [Catenibacterium mitsuokai DSM
15897]
gi|224524822|gb|EEF93927.1| agmatine deiminase [Catenibacterium mitsuokai DSM 15897]
Length = 366
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 119/212 (56%), Gaps = 17/212 (8%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQ 70
G+ MP E+E C M +P R +W +A +A+ VF ++A + +E V + +
Sbjct: 12 GFRMPGEFEKQDGCLMIYPWR---PGSWNYNAKYARDVFVEIAHILGAYEDVYMIVRSED 68
Query: 71 WENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
A ++L +I +IE S + +W RDTGPT V+N G I+W FN+WGG
Sbjct: 69 MNEAITRLDHPHIHIIETSSDDAWARDTGPTFVINDKGERRG--------INWEFNAWGG 120
Query: 130 VDDGCYRDWSLDLQVARKI---LSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNK 186
DG Y W D + + L + P VLEGGSIHVDGEGT +TTEECLL+
Sbjct: 121 SYDGLYSHWENDQLIPNHLCEYLGDDLYEARP--FVLEGGSIHVDGEGTLITTEECLLSP 178
Query: 187 NRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
RNP +T+ +IE +LK YL V KIIWLP G++
Sbjct: 179 GRNPTMTRDEIEEKLKQYLNVEKIIWLPYGIY 210
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 88/174 (50%), Gaps = 20/174 (11%)
Query: 146 RKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIENEL- 201
++ L+ E++ P+ + + + HVD + E LL + +P + + E+
Sbjct: 194 KQYLNVEKIIWLPYGIYNDETNGHVDNFCCFVKPGEVLLAWTDDEEDPQYVRSHMAYEIL 253
Query: 202 ----KAYLGVMKIIWLP----------RGLFGMIHDGEAKPRLAGTRLAASYVNFYIANG 247
A +KI LP L G + R G RLAASY+NFYI N
Sbjct: 254 SSQKDAKGRPLKIHKLPIPHIPVCITEEDLKGYEFEEGEDTREVGERLAASYINFYIGNH 313
Query: 248 GIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
++ PQFGD+ D AV +L + FP+ +++ IE AR I+ GGGNIHCITQQ PA
Sbjct: 314 CVLVPQFGDEH-DSVAVEILKECFPERDIIPIE-ARVILTGGGNIHCITQQIPA 365
>gi|399005406|ref|ZP_10707989.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM17]
gi|398126183|gb|EJM15627.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM17]
Length = 349
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 116/213 (54%), Gaps = 14/213 (6%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEP 61
M A +G+ MPAEW H+ WM +P +N W Q FA+VA AI++FEP
Sbjct: 1 MQFNDAQNGWFMPAEWVQHAATWMAFPHNQALWENSWGVTLAEVQVDFARVANAIARFEP 60
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
V + AR NI ++E+++N SW RD+GP+ V + + AG++
Sbjct: 61 VKMVVDPCAVARARELCGANIELVELAINDSWCRDSGPSFVCHPRLGT--------AGVN 112
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
W FN+WGG C LD +AR+IL L F + EGG+IHVDG+GT +TTE
Sbjct: 113 WRFNAWGG-KSAC----DLDQSLARRILDNLGLQCFNTLLTNEGGAIHVDGQGTLITTES 167
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLP 214
LLN NRNP ++K ++E LGV K IWLP
Sbjct: 168 VLLNGNRNPAMSKAEMEEIFARLLGVKKTIWLP 200
>gi|421008271|ref|ZP_15471382.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0119-R]
gi|421033346|ref|ZP_15496368.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0930-S]
gi|392199724|gb|EIV25334.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0119-R]
gi|392229887|gb|EIV55397.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0930-S]
Length = 336
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/346 (32%), Positives = 149/346 (43%), Gaps = 72/346 (20%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MP E + WM +P + + + A A+ +A VA AI FEPV++ A
Sbjct: 1 MPPETAAQERIWMAFPPQGASVFENAESAHEARTAWAAVAHAIIDFEPVSMIVDPADRAV 60
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
A L I V+E ++ +W RD GPT V +VA +DW FN WG D
Sbjct: 61 APKYLSREIDVVEAPLDDAWMRDIGPTFVRGTDG--------RVAAVDWVFNGWGARD-- 110
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ W D + R + + S+V EGG I VDGEGT L TE L+ +RNP L
Sbjct: 111 -WARWDNDAHIGRFVGQLAGVEIVSSSLVNEGGGIQVDGEGTVLVTETVQLDPSRNPGLD 169
Query: 194 KGQIENELKAYLGVMKIIWLPRGL------FGM-------------------IHDGEAKP 228
+ +E EL +G +IWLPRGL FG + + A P
Sbjct: 170 RHAVEVELARTIGARHVIWLPRGLTRDAERFGTRGHVDILVAIPSPGRLLVHVQNDPAHP 229
Query: 229 RLAGTR-----LAAS-----------------------------YVNFYIANGGIITPQF 254
A T+ LA S Y+N + N G+I +F
Sbjct: 230 DHAITKEIVDLLAQSHDVNGKVWEITPIPAPAVLRDSESWVDYSYINHLVVNDGVIACRF 289
Query: 255 GDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
GD D A +L+ +P VV ++ AREI GG IHCITQQQP
Sbjct: 290 GDSA-DDAATAILADEYPGRRVVTVD-AREIFARGGGIHCITQQQP 333
>gi|398789139|ref|ZP_10551101.1| Agmatine deiminase [Streptomyces auratus AGR0001]
gi|396991657|gb|EJJ02792.1| Agmatine deiminase [Streptomyces auratus AGR0001]
Length = 379
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 147/344 (42%), Gaps = 76/344 (22%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
+P E PH+ +M WP R W A + A++A AI++FEPVT+ A+
Sbjct: 52 LPEETHPHAATYMAWPTR----QIWGPAAAGVRDDIARIARAIAEFEPVTLLANERDVPA 107
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
AR + V+ + ++ W RD+GP V+ VAG+D NFN WG
Sbjct: 108 ARRACGFGVEVLPIPVDDLWMRDSGPVFVLGPDG---------VAGVDLNFNGWGN---- 154
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
++ D VAR +L +PR + EGG++ DG GT L TE L+ NRN +
Sbjct: 155 -KQEHGRDRHVARALLGHAGIPRITAPITAEGGALETDGRGTLLATESSLVTDNRNRGRS 213
Query: 194 KGQIENELKAYLGVMKIIW----------------LPR----GLFGMIHDGEAKPRLA-- 231
+ IE L+ GV ++IW L R G+ M PR A
Sbjct: 214 RTDIERALRDLFGVTRVIWVKGVRGKDITDYHIDALARFAEPGVVVMSTPAAGAPRTAFT 273
Query: 232 -----------------GTRLA------------------ASYVNFYIANGGIITPQFGD 256
G RL A YVN+Y+ANG +I P +GD
Sbjct: 274 AAYEQARTVIEGSVDARGKRLEVVELPEPLHIGRHGDGFLACYVNYYVANGAVIMPCYGD 333
Query: 257 KKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
KK D A + +P +VV + + GGG IHC TQQ+P
Sbjct: 334 KKADSRAAATVRDLYPGRKVVQLP-LDHLGEGGGGIHCATQQRP 376
>gi|194334409|ref|YP_002016269.1| Agmatine deiminase [Prosthecochloris aestuarii DSM 271]
gi|194312227|gb|ACF46622.1| Agmatine deiminase [Prosthecochloris aestuarii DSM 271]
Length = 348
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 157/356 (44%), Gaps = 79/356 (22%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
Y MPAEW H W+ WP + +W VFA +A A+ ++E V + +
Sbjct: 6 YSMPAEWAAHDATWLSWP---HKEASWPGKFEPVPDVFAAMAAALCRYEAVHINVLDDEM 62
Query: 72 ENARSQLPE----------NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
E + +L + I + N +W RD GP V G + KV ++
Sbjct: 63 ERSICRLLDVREIASEERARISFHRIPTNDAWCRDHGPNFVFR----DVGTKREKVI-VN 117
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
W FN+WGG Y + D V K+ + MVLEGG+I V+G G LTTE
Sbjct: 118 WEFNAWGGK----YEPYDDDNSVPEKVAALRGCDLVLPGMVLEGGAIDVNGSGLLLTTEA 173
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG----------------- 224
CLLN NRNP LT+ QIE LK YLG+ +++WL G+ G DG
Sbjct: 174 CLLNPNRNPSLTRQQIEQNLKTYLGIEQVLWLKDGIAGDDTDGHVDDMARFVNENTVVIA 233
Query: 225 -EAKP------------RLA-------GTRL------------------AASYVNFYIAN 246
E P RL G+RL ASY NFYIAN
Sbjct: 234 VEENPDDENYAPLQENYRLLQDFTCSDGSRLDVLTLPMPDPVYYENERLPASYANFYIAN 293
Query: 247 GGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
++ P + D A+ +L FP E+VGI+ +++ G G IHC+T ++P++
Sbjct: 294 RQVLVPIYRCSN-DRVALDILQGCFPDREIVGID-CTDLIWGLGAIHCVTHEEPSL 347
>gi|398887784|ref|ZP_10642410.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM55]
gi|398191929|gb|EJM79103.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM55]
Length = 350
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 116/205 (56%), Gaps = 14/205 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
G++MPAEW H+ WM WP ++ WR Q FA+VA AI++FE V + +
Sbjct: 10 GWMMPAEWVTHAATWMVWPHNKTLWESGWRVTLPQVQEDFARVANAIARFELVKLVVDPS 69
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+A++ NI +IE+++N SW RD+GP+ V + +AG+ W FN+WGG
Sbjct: 70 AVASAKALCGPNIELIELAVNDSWCRDSGPSFVCHPQQG--------LAGVSWRFNAWGG 121
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
LD +AR+ L+ L F ++ EGG+IHVDGEGT +TTE LLN NRN
Sbjct: 122 -----KSAHDLDESLARRALNQLGLECFGTALSNEGGAIHVDGEGTLITTESVLLNPNRN 176
Query: 190 PHLTKGQIENELKAYLGVMKIIWLP 214
P +TK +IE LGV K IWLP
Sbjct: 177 PGVTKAEIEEIFTRLLGVKKTIWLP 201
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
ASY NFYIANG II P +G D A VL+QAFP EVV + R + GGG +HC
Sbjct: 281 FCASYTNFYIANGAIIMPAYGIDA-DKVAAEVLAQAFPGREVVPV-RINHLAHGGGGVHC 338
Query: 295 ITQQQPAIPT 304
ITQQQPA P
Sbjct: 339 ITQQQPAWPV 348
>gi|254393753|ref|ZP_05008872.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|197707359|gb|EDY53171.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
Length = 339
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 113/208 (54%), Gaps = 18/208 (8%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALH--AQRVFAKVATAISKFEPVTVCASAA 69
+ MP EW PH + WM WP R + A+R +A VA A+ +FEPVTV
Sbjct: 5 FRMPPEWAPHERTWMAWP----RPNTTFTPGFLPVARRAWADVARAVRRFEPVTVVVPPG 60
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
E AR L I ++E ++ +W RDTGPT V S GA ++A +DW FN WGG
Sbjct: 61 GAEEARELLGPGIDLVERELDDAWMRDTGPTFV------SDGA---RLAAVDWVFNGWGG 111
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
+ + W D +AR+I + ++P P + EGG IHVDGEGT L TE L RN
Sbjct: 112 QE---WARWEHDSALAREIAALAKVPVHPSPLTNEGGGIHVDGEGTVLLTETVQLGPERN 168
Query: 190 PHLTKGQIENELKAYLGVMKIIWLPRGL 217
P T+ ++E E+ A LG K IWL RGL
Sbjct: 169 PGWTRQEVETEIHARLGTTKAIWLKRGL 196
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ NGG++ F D + D +A ++L +P EVV ++ AR + GGG +HCITQ
Sbjct: 277 SYINHYVCNGGVVLCAFDDPR-DADAAKILGGLYPDREVVLVD-ARPVFAGGGGVHCITQ 334
Query: 298 QQPAI 302
QQP +
Sbjct: 335 QQPRV 339
>gi|440695157|ref|ZP_20877709.1| hypothetical protein STRTUCAR8_10134 [Streptomyces turgidiscabies
Car8]
gi|440282703|gb|ELP70120.1| hypothetical protein STRTUCAR8_10134 [Streptomyces turgidiscabies
Car8]
Length = 349
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 113/212 (53%), Gaps = 15/212 (7%)
Query: 8 ALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRV-FAKVATAISKFEPVTVCA 66
A G+ MPAEW PH + WM WP D D L A RV +A VA + +FEPVTV
Sbjct: 4 AADGFRMPAEWTPHERTWMAWPGPNPTFDEPED--LTAARVAWASVARTVRRFEPVTVVC 61
Query: 67 SAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
Q AR+ L + +E ++ +W RD GPT + N + ++A +DW FN
Sbjct: 62 GPGQSAEARALLGPGVDTVERDLDDAWMRDIGPTFLTNDAG--------ELAAVDWTFNG 113
Query: 127 WGGVDDGCYRDWSLDLQVARKILSTE-RLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
WG D + W D ++A + + + +V EGG+IHVDGEGT L TE L
Sbjct: 114 WGAQD---WARWEHDAKIAGYVSGLAGSVTTYTSQLVNEGGAIHVDGEGTVLLTETVQLG 170
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
RNP T+ ++E E+ A+LG K IWLPRGL
Sbjct: 171 PERNPGWTRERVEAEIHAHLGTRKAIWLPRGL 202
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ NGG++ F D + D A + FP+ V ++ AR I GGG IHCITQ
Sbjct: 284 SYINHYLCNGGVVLCGFDDPR-DEIAAGIFRGLFPRRTVTLVD-ARPIFAGGGGIHCITQ 341
Query: 298 QQP 300
QQP
Sbjct: 342 QQP 344
>gi|453364161|dbj|GAC80010.1| hypothetical protein GM1_014_00020 [Gordonia malaquae NBRC 108250]
Length = 344
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 109/204 (53%), Gaps = 11/204 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAE EPH + WM +P L + D A+ ++ VA I EPVTV Q E
Sbjct: 10 MPAEHEPHERTWMAFPAPGYSLGDTETDHHEARTAWSAVANTIVDHEPVTVVVDPTQTEF 69
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
A+ L + ++E ++ +W RD GPT VV+++ V G+DW FN WGG D
Sbjct: 70 AKKYLSATVDIVEAPLDDAWMRDIGPTFVVSENGG--------VGGVDWVFNGWGGQD-- 119
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ W D +AR ++++ + R ++V EGG I VDG GT L TE L+ RNP L
Sbjct: 120 -WAAWGHDQHIARAVIASAGVERIGSTLVNEGGGIQVDGAGTVLVTETVQLDPGRNPQLA 178
Query: 194 KGQIENELKAYLGVMKIIWLPRGL 217
K +E EL LGV +IWLP GL
Sbjct: 179 KSGVERELARTLGVDTVIWLPCGL 202
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ANG ++ F D D EAV +LS +P VV ++ AR I GG IHCITQ
Sbjct: 282 SYINHYVANGLVVACSFDDPS-DAEAVEILSSVYPGRTVVSVD-ARPIFARGGGIHCITQ 339
Query: 298 QQPA 301
QPA
Sbjct: 340 NQPA 343
>gi|398993098|ref|ZP_10696055.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM21]
gi|398135692|gb|EJM24801.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM21]
Length = 424
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 123/236 (52%), Gaps = 23/236 (9%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
PA G+ +PAEWEPH M +P Y++ +++D Q VA AI++FEPV + A
Sbjct: 86 PASDGFRVPAEWEPHQSVLMAYP--YDK--SYKDQLKPMQDSVINVANAIAQFEPVLMMA 141
Query: 67 SAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
E R + N+ VIE N W RDT P ++ S + G D+ FN
Sbjct: 142 MTGYTEVVRKRCDPNVTVIENPYNDCWTRDTAPVFALSPSGHD-------MLGRDFIFNG 194
Query: 127 WGGVDDGCYRDWS--LDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL 184
WG WS LD Q+ + +T +P+ P +MV EGG++ DG+GT +TTE+CLL
Sbjct: 195 WG-------NRWSATLDDQLPTGVCATLNVPKSPVNMVFEGGAVITDGQGTLITTEQCLL 247
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYV 240
N NRNP +TK QIE L K+IWLP G++G D A L A+Y+
Sbjct: 248 NPNRNPSMTKAQIETVLLRAYNATKMIWLPYGVYG---DDGAAATDGHVDLVAAYI 300
>gi|428215511|ref|YP_007088655.1| peptidylarginine deiminase-like protein [Oscillatoria acuminata PCC
6304]
gi|428003892|gb|AFY84735.1| peptidylarginine deiminase-like enzyme [Oscillatoria acuminata PCC
6304]
Length = 369
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 154/359 (42%), Gaps = 89/359 (24%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT-- 63
TP + MPAEWEPH CW+ +P D W + A+R F + AI+ +PV+
Sbjct: 5 TPPVVTDRMPAEWEPHQACWLAFP---SHEDLWMESLEAARREFVDLCWAIADPDPVSGE 61
Query: 64 ---------VCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQA 114
V A Q + + R + W RD GP +
Sbjct: 62 CRGEPLEILVLNEAIQAIAEAALKGISARFHIIPFGDIWLRDIGPIFRIEPDGT------ 115
Query: 115 PKVAGIDWNFNSWGGVDDGCYRDWSL--DLQVARKILSTERLPRFPHSMVLEGGSIHVDG 172
+A + +NFN WG + L D QVA+ + LP + + LEGG+I VDG
Sbjct: 116 --LATVWFNFNGWG-------EKYILPGDDQVAKTVSDRLNLPSYHFPVTLEGGAIEVDG 166
Query: 173 EGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGE------- 225
EGTCLTT +CLLN NRNP LT+ ++E L+A GV K++WL +GL DG
Sbjct: 167 EGTCLTTRQCLLNANRNPKLTQAELEEILQAAFGVSKVLWLNQGLLNDHTDGHIDTIARF 226
Query: 226 --------AKPRLA-----------------------------------------GTRLA 236
+PR A G +
Sbjct: 227 IAPGVVLCMEPREADDPNAAVLTEIAQNLSEMTDAKGRPLEVIRIPSPGKIVDDSGEIVP 286
Query: 237 ASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCI 295
ASY NFYI N ++ P +G K+D EAV +++ FP +G A+ I+LGGG HCI
Sbjct: 287 ASYANFYIGNRTVVVPTYG-AKYDQEAVEAIAKLFPTRRTIG-RSAKAILLGGGAFHCI 343
>gi|94497731|ref|ZP_01304298.1| peptidylarginine deiminase [Sphingomonas sp. SKA58]
gi|94422780|gb|EAT07814.1| peptidylarginine deiminase [Sphingomonas sp. SKA58]
Length = 328
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 148/341 (43%), Gaps = 65/341 (19%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV-TVCASAAQ 70
+ MPAEW PH W+G+P D A FA K E V V A
Sbjct: 3 FRMPAEWAPHDWTWIGFPTNPAEWPGAFDGARQQIAAFANALHCGGKGEQVRLVVAHEED 62
Query: 71 WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
+ AR+ + ++R++ ++ W RDT P V+N + A +D+ FN WGG
Sbjct: 63 AKAARAMVDASVRIVVANLGDVWLRDTAPIAVLNGTGGR--------ALVDFGFNGWGG- 113
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
D + ++ +T LP + V EGG+I DG G +TTE+CLLN NRNP
Sbjct: 114 ----KYQMPGDEDIGARLAATTGLPTSTQNWVFEGGAIDTDGTGLFVTTEQCLLNPNRNP 169
Query: 191 HLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG-------------------------- 224
L +G+IE L LG+ ++WL GL DG
Sbjct: 170 DLDRGKIETLLAGSLGLSDMLWLGDGLRNDHTDGHVDNLARFVAPGVLALPVATTPDDPN 229
Query: 225 -----EAKPR------------------LAGTRLAASYVNFYIANGGIITPQFGDKKWDG 261
+A+ R + G + ASY+NFYI N +I P +G D
Sbjct: 230 AAIYADARARAQAYGLEVVDVPSPGLVLVDGEPIPASYMNFYIGNAAVIVPIYGQPN-DQ 288
Query: 262 EAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
A+ FP E+VG+ R+ I+ GGG+ HC +QQ P++
Sbjct: 289 AALDAFRAFFPGREIVGL-RSDAILSGGGSFHCCSQQMPSL 328
>gi|294815304|ref|ZP_06773947.1| Putative peptidylarginine deiminase [Streptomyces clavuligerus ATCC
27064]
gi|326443660|ref|ZP_08218394.1| putative agmatine deiminase [Streptomyces clavuligerus ATCC 27064]
gi|294327903|gb|EFG09546.1| Putative peptidylarginine deiminase [Streptomyces clavuligerus ATCC
27064]
Length = 333
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/206 (41%), Positives = 112/206 (54%), Gaps = 18/206 (8%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALH--AQRVFAKVATAISKFEPVTVCASAAQW 71
MP EW PH + WM WP R + A+R +A VA A+ +FEPVTV
Sbjct: 1 MPPEWAPHERTWMAWP----RPNTTFTPGFLPVARRAWADVARAVRRFEPVTVVVPPGGA 56
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
E AR L I ++E ++ +W RDTGPT V S GA ++A +DW FN WGG +
Sbjct: 57 EEARELLGPGIDLVERELDDAWMRDTGPTFV------SDGA---RLAAVDWVFNGWGGQE 107
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ W D +AR+I + ++P P + EGG IHVDGEGT L TE L RNP
Sbjct: 108 ---WARWEHDSALAREIAALAKVPVHPSPLTNEGGGIHVDGEGTVLLTETVQLGPERNPG 164
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGL 217
T+ ++E E+ A LG K IWL RGL
Sbjct: 165 WTRQEVETEIHARLGTTKAIWLKRGL 190
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ NGG++ F D + D +A ++L +P EVV ++ AR + GGG +HCITQ
Sbjct: 271 SYINHYVCNGGVVLCAFDDPR-DADAAKILGGLYPDREVVLVD-ARPVFAGGGGVHCITQ 328
Query: 298 QQPAI 302
QQP +
Sbjct: 329 QQPRV 333
>gi|355648051|ref|ZP_09055408.1| hypothetical protein HMPREF1030_04494 [Pseudomonas sp. 2_1_26]
gi|354827579|gb|EHF11725.1| hypothetical protein HMPREF1030_04494 [Pseudomonas sp. 2_1_26]
Length = 346
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 115/207 (55%), Gaps = 18/207 (8%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERL---DNWRDDALHAQRVFAKVATAISKFEPVTVCAS 67
G+ MPAEW PH+ WM +P + R+ W Q+ FA VA AI++FEPV +
Sbjct: 7 GWRMPAEWTPHAATWMAFP--HNRMLWESEWGVSLADVQQDFAAVANAIARFEPVKLVVD 64
Query: 68 AAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSW 127
A + A N+ +IE++++ SW RD+GP+ V + +AG+ W FN+W
Sbjct: 65 PAALDRAGELCAGNVELIELAIDDSWCRDSGPSFVCHPQLG--------LAGVSWRFNAW 116
Query: 128 GGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
GG ++ D +AR+IL L F + EGG+IHVDGEGT +TTE LLN N
Sbjct: 117 GG-----KSAYAQDASLARRILDGLGLECFGVPLANEGGAIHVDGEGTLITTESVLLNAN 171
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLP 214
RNP L+K +IE LGV + IWLP
Sbjct: 172 RNPGLSKAEIEALFARLLGVTRTIWLP 198
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 154 LPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWL 213
LP P + + HVDG LL+ + ++ E + L ++
Sbjct: 197 LPGDPDRVTGDMTDGHVDGVCAFARPGALLLDATSDTTSAYAEVVRENRRAL---ELALD 253
Query: 214 PRG----LFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQ 269
RG L + GE P ASY NFYIANG II P +G D A L++
Sbjct: 254 ARGRRFELIELFDAGEVAPEEG--VFCASYTNFYIANGAIIMPAYGVAA-DDAAAATLAR 310
Query: 270 AFPKYEVVGIERAREIVLGGGNIHCITQQQPAIP 303
AFP EVV + R + GGG +HCITQQQPA P
Sbjct: 311 AFPAREVVPV-RIDHLAHGGGGVHCITQQQPAWP 343
>gi|78188908|ref|YP_379246.1| hypothetical protein Cag_0940 [Chlorobium chlorochromatii CaD3]
gi|78171107|gb|ABB28203.1| agmatine deiminase [Chlorobium chlorochromatii CaD3]
Length = 346
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 156/357 (43%), Gaps = 81/357 (22%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
Y MP EW H W+ WP +L++W VFA++A +S E V +
Sbjct: 5 YHMPPEWALHQATWLSWP---HKLESWPGKFEPVPAVFAEIAAWLSTSEEVHINVLDEAM 61
Query: 72 ENARSQLPENIRVIEMSM----------NGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
N +L ++ + + M N +W RD GP V ++ KV I
Sbjct: 62 ANEARRLISKVQGVPLRMERIVLHTIANNDAWCRDYGPNYVFHEKDGKRD----KVI-IK 116
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
W +N+WGG Y + D VA I + +++P F +MVLEGGSI V+GEG LTTE
Sbjct: 117 WKYNAWGGK----YEPYDADDNVAFVIAAMQQIPLFETAMVLEGGSIDVNGEGLLLTTEA 172
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG----------------- 224
CLLN NRNP L K QIE L YLGV K++WL G+ G DG
Sbjct: 173 CLLNPNRNPFLNKEQIEKILGCYLGVQKVLWLGDGIVGDDTDGHIDDLARFVNANTVVIT 232
Query: 225 --------------------------EAKPRLAGTRLAASYVNFY-------------IA 245
E KP L +L FY IA
Sbjct: 233 VEDDPADENYPILQENYERLCTFTDLEGKP-LNVVKLPMPSTVFYNNERLPATYANFYIA 291
Query: 246 NGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
N ++ P + D +A+ +L + FP +V+GI+ +++ G G IHCI+ ++P +
Sbjct: 292 NSVVLVPTYRCAN-DAKAIEILQRYFPTRQVIGID-CTDLIWGLGAIHCISHEEPVL 346
>gi|116049173|ref|YP_792025.1| peptidylarginine deiminase [Pseudomonas aeruginosa UCBPP-PA14]
gi|296390401|ref|ZP_06879876.1| putative peptidylarginine deiminase [Pseudomonas aeruginosa PAb1]
gi|416873465|ref|ZP_11917523.1| putative peptidylarginine deiminase [Pseudomonas aeruginosa 152504]
gi|421175707|ref|ZP_15633380.1| putative peptidylarginine deiminase [Pseudomonas aeruginosa CI27]
gi|115584394|gb|ABJ10409.1| putative peptidylarginine deiminase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|334844924|gb|EGM23493.1| putative peptidylarginine deiminase [Pseudomonas aeruginosa 152504]
gi|404531857|gb|EKA41793.1| putative peptidylarginine deiminase [Pseudomonas aeruginosa CI27]
Length = 346
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 115/207 (55%), Gaps = 18/207 (8%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERL---DNWRDDALHAQRVFAKVATAISKFEPVTVCAS 67
G+ MPAEW PH+ WM +P + R+ W Q+ FA VA AI++FEPV +
Sbjct: 7 GWRMPAEWTPHAATWMAFP--HNRMLWESEWGVSLADVQQDFAAVANAIARFEPVKLVVD 64
Query: 68 AAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSW 127
A + A N+ +IE++++ SW RD+GP+ V + +AG+ W FN+W
Sbjct: 65 PAALDRAGELCAGNVELIELAIDDSWCRDSGPSFVCHPQLG--------LAGVSWRFNAW 116
Query: 128 GGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
GG ++ D +AR+IL L F + EGG+IHVDGEGT +TTE LLN N
Sbjct: 117 GG-----KSAYAQDASLARRILDGLGLECFGVPLANEGGAIHVDGEGTLITTESVLLNAN 171
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLP 214
RNP L+K +IE LGV + IWLP
Sbjct: 172 RNPGLSKAEIEALFARLLGVTRTIWLP 198
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 217 LFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEV 276
L + GE P ASY NFYIANG II P +G D A L++AFP EV
Sbjct: 261 LIELFDAGEVAPEEG--VFCASYTNFYIANGAIIMPAYGVAA-DDAAAATLARAFPAREV 317
Query: 277 VGIERAREIVLGGGNIHCITQQQPAIP 303
V + R + GGG +HCITQQQPA P
Sbjct: 318 VPV-RIDHLAHGGGGVHCITQQQPAWP 343
>gi|400975553|ref|ZP_10802784.1| peptidylarginine deiminase [Salinibacterium sp. PAMC 21357]
Length = 355
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 154/350 (44%), Gaps = 71/350 (20%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MP+E H + WM +P E L + +A VA +++FEPV++ +
Sbjct: 1 MPSETAAHERTWMAFPRIGETLGATDAERELGYAAWADVANVVAEFEPVSMVVDPTEMIR 60
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG-IDWNFNSWGGVDD 132
AR L +I ++E ++ W RD GPT V++ P V G +DW FN WG +
Sbjct: 61 ARRMLASSIELLEAPLDEFWMRDIGPTFVLDD-------HRPGVLGAVDWIFNGWGAPE- 112
Query: 133 GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
+ +W ++AR + +V EGG +HVDGEGT L T+ L+ RNP
Sbjct: 113 --WAEWEQSAKIARVVAEATGAELVSSLLVAEGGGLHVDGEGTVLLTDTVQLDPRRNPLA 170
Query: 193 TKGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIHD------ 223
+ ++E+E+ +G +WLPRGL FG ++H
Sbjct: 171 DRARVESEMLRTIGATHAVWLPRGLTRDYDDFGTNGHVDIVATIASPGRVLLHAQPNPEH 230
Query: 224 ------GEAKPRLAGTRLAA-------------------SYVNF-----YIANGGIITPQ 253
E + L R AA +V++ + NGG+I
Sbjct: 231 PDHQVMAEIRASLESQRDAAGRAFEIVELPAPAVLRDDHGFVDYSYVNHLVVNGGVIGCG 290
Query: 254 FGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIP 303
FGD D A +L A+P +V ++ +REI GG IHCITQQQP +P
Sbjct: 291 FGDSAADARAAEILGDAYPDRDVRMVD-SREIFARGGGIHCITQQQPLLP 339
>gi|421244743|ref|ZP_15701245.1| agmatine deiminase [Streptococcus pneumoniae 2081685]
gi|395609920|gb|EJG70004.1| agmatine deiminase [Streptococcus pneumoniae 2081685]
Length = 342
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 112/217 (51%), Gaps = 31/217 (14%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M +P GY MPAE+EPH M WP R +W F+ V
Sbjct: 1 MMDSPKKLGYHMPAEYEPHHGTLMIWPTR---PGSW-------------------PFQRV 38
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ A A+S L + + +++ N +W RDTGPTI+VN K +DW
Sbjct: 39 YLLVEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDW 90
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEE 181
FN+WGG DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE
Sbjct: 91 AFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTES 150
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
CLL+ RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 151 CLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIY 187
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 277 RLAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 334
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 335 CITQQIP 341
>gi|114798798|ref|YP_761675.1| peptidyl-arginine deiminase family protein [Hyphomonas neptunium
ATCC 15444]
gi|114738972|gb|ABI77097.1| peptidyl-arginine deiminase family protein [Hyphomonas neptunium
ATCC 15444]
Length = 327
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 149/341 (43%), Gaps = 74/341 (21%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTV-CASAAQWE 72
+P EW P + W GWP E W D A+ A + F PV + C S
Sbjct: 8 LPPEWAPQAALWAGWPRLAE---EWGGDLTAARSEIAGFIRKAASFVPVKIACGSREAAA 64
Query: 73 NARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG--V 130
+AR ++E+ W RDTGP VV + AS AQ + FN WGG +
Sbjct: 65 SARLATGGAGEIVEIPTGDIWLRDTGP--VVTGTGASRQAQV-------FRFNGWGGKYL 115
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
+G D + A ++ E LP HS++LEGG I DGEG LTT +CLLN NRNP
Sbjct: 116 MEG-------DTETAGEVARVESLPARRHSLILEGGGIDADGEGRLLTTRQCLLNPNRNP 168
Query: 191 HLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEA------------------------ 226
L++ +IE L A LGV + IWL GL DG
Sbjct: 169 QLSQAEIEASLTAALGVDEFIWLGDGLMNDHTDGHVDNIARFIAPGHVLCQHPADRNDPN 228
Query: 227 ----------------------KPRLA----GTRLAASYVNFYIANGGIITPQFGDKKWD 260
P L G + AS++NF I N ++ P + D ++
Sbjct: 229 AETLQEIERTLVSHGLMVSSIPSPGLVHFGDGVPVPASHMNFTITNRAVLVPVYED-RFS 287
Query: 261 GEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
A+ L FP EV+G+ AR I+ GGG+ HC+T++ PA
Sbjct: 288 AVALSDLKALFPGREVIGLP-ARAILAGGGSFHCMTREIPA 327
>gi|302336504|ref|YP_003801711.1| agmatine deiminase [Olsenella uli DSM 7084]
gi|301320344|gb|ADK68831.1| agmatine deiminase [Olsenella uli DSM 7084]
Length = 404
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 126/245 (51%), Gaps = 41/245 (16%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEP 61
E TP G+ MPAE+ + WMGWP R D W A AQR +A +A AI++F P
Sbjct: 6 ESESTPKADGFHMPAEFAEQKRVWMGWP---RRTDTWSFGAKPAQRQYAAIARAIAEFTP 62
Query: 62 VTVCASAAQWENARSQLP--ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
V +CA+ + N ++ E + V+EM+ + +WFRDTG T VV+ ++
Sbjct: 63 VIMCANEGDYANCKAVFENDEGVTVLEMTTDDAWFRDTGATFVVDDKG--------ELRA 114
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKI--LSTERLPRFPHSMVLEGGSIHVDGEGTCL 177
+W FN++GG+ DG Y W D ++A+K+ ++ R R P MVLEGGSI VDGEGT +
Sbjct: 115 NNWRFNAYGGMVDGLYFPWRADDEIAQKMAEIAGARTYR-PDDMVLEGGSITVDGEGTVV 173
Query: 178 TTEECLLNKNRNPHLTKGQIEN-------------------------ELKAYLGVMKIIW 212
T++CLL+ R E+ LK YLGV K+IW
Sbjct: 174 VTDQCLLSPGRTCSAVMADEEDVDTIWPRHARKFEPWSEALREYMTEHLKEYLGVEKVIW 233
Query: 213 LPRGL 217
+ G+
Sbjct: 234 VKEGI 238
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 8/84 (9%)
Query: 223 DGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPK------YEV 276
D A+PR+ L ASY+N+ + N G+ITPQ+GD+ D A+ L + + + Y V
Sbjct: 318 DENAEPRVPDEPLIASYMNYLVTNHGVITPQYGDEN-DQLAIDTLQRIYDETWGEGVYRV 376
Query: 277 VGIERAREIVLGGGNIHCITQQQP 300
VG+ ++ ++V GGGNIHCITQQ+P
Sbjct: 377 VGV-KSDQVVYGGGNIHCITQQEP 399
>gi|398847891|ref|ZP_10604766.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM84]
gi|398250931|gb|EJN36221.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM84]
Length = 346
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 115/205 (56%), Gaps = 14/205 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
G+ MPAEW H+ WM WP ++ W+ QR FA+VA AI++FEPV + +
Sbjct: 8 GWRMPAEWARHAATWMIWPHNQALWESGWQVRLADVQRDFARVAAAIARFEPVKMVVDPS 67
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
AR+ NI ++E++++ SW RD+GP+ + + +AG+ W FN+WG
Sbjct: 68 ATATARALCGANIELVELAVDDSWCRDSGPSFICHPQHG--------LAGLSWRFNAWG- 118
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
D + D + R+IL L F ++ EGG+IHVDGEGT +TTE LLN NRN
Sbjct: 119 -DKSAH---GQDRSLGRRILDHLGLDGFSTALCNEGGAIHVDGEGTLITTESVLLNPNRN 174
Query: 190 PHLTKGQIENELKAYLGVMKIIWLP 214
P ++K + E YLG+ K IWLP
Sbjct: 175 PGISKAEFERCFARYLGIRKTIWLP 199
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
ASY NFY+ANG +I P +G D +A L+ AFP E+V + R I GGG IHC
Sbjct: 279 FCASYTNFYLANGAVIMPAYGIAA-DADAATQLAHAFPGREIVPV-RIDHIAHGGGGIHC 336
Query: 295 ITQQQPAI 302
ITQQQP +
Sbjct: 337 ITQQQPEV 344
>gi|255036391|ref|YP_003087012.1| Agmatine deiminase [Dyadobacter fermentans DSM 18053]
gi|254949147|gb|ACT93847.1| Agmatine deiminase [Dyadobacter fermentans DSM 18053]
Length = 352
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 157/360 (43%), Gaps = 79/360 (21%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQR-VFAKVATAISKFEPVTV 64
TP G+ PAEW PH W+ +P +W+ D L R + AIS+ E V V
Sbjct: 9 TPRELGFTFPAEWAPHRATWLTFP---HNDASWQGDKLAKMRPQYLAFIKAISQGEKVGV 65
Query: 65 CASAAQW------ENARSQLPEN-IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKV 117
A+ E ++ + N I I N +W RD GP+ VVN +
Sbjct: 66 IANDEALKQFIIGELDKTGVDLNKIEFIVKPTNDAWCRDHGPSFVVNPKTGEKMI----- 120
Query: 118 AGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCL 177
+DW N+WGG Y + D + R + LP +++EGGS+ +G GT L
Sbjct: 121 --VDWGHNAWGGK----YPPYDDDNRTPRAVAEYLNLPVVNPGIIMEGGSVEFNGAGTIL 174
Query: 178 TTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG------------- 224
T+E CLLN NRNPHL + QIE L Y GV +I+W+ G+ G DG
Sbjct: 175 TSESCLLNLNRNPHLKQAQIEQHLFDYYGVEQILWVEGGIEGDDTDGHIDDTTRFVNEDT 234
Query: 225 -----EAKP------------------RLA-------------------GTRLAASYVNF 242
E+ P RL G R SY NF
Sbjct: 235 VVACVESNPADDNYKMLQTNLGMLKNMRLVSGKQLNIIELPMPKAVVIDGFRTPGSYANF 294
Query: 243 YIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
I N G+I P F + D A+ +L +AFP +++ + A EI+ G G+ HC++QQ+P +
Sbjct: 295 LICNAGVIVPVFNNPH-DQVAIDILEKAFPGRKIIPL-LATEIIWGQGSFHCLSQQEPLV 352
>gi|345851319|ref|ZP_08804297.1| putative agmatine deiminase [Streptomyces zinciresistens K42]
gi|345637225|gb|EGX58754.1| putative agmatine deiminase [Streptomyces zinciresistens K42]
Length = 346
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 112/213 (52%), Gaps = 13/213 (6%)
Query: 8 ALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCAS 67
A G+ MPAEW PH + WM WP D + A A+R +A VA A+ +FEPVTV
Sbjct: 4 AADGFRMPAEWAPHERTWMAWPGPNPTFDAPGELAA-ARRAWASVARAVRRFEPVTVVCG 62
Query: 68 AAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSW 127
Q AR+ L + + +E ++ +W RD GPT + + ++A +DW FN W
Sbjct: 63 PGQSAGARTLLGDGVETVERDLDDAWMRDVGPTFLTDGRG--------RLAAVDWTFNGW 114
Query: 128 GGVDDGCYRDWSLDLQVARKILSTERLPR-FPHSMVLEGGSIHVDGEGTCLTTEECLLNK 186
G + + W D ++ + R + +V EGG IHVDGEGT L TE L
Sbjct: 115 GAQE---WARWEHDAKIGAYVSDLAGASRTYASRLVNEGGGIHVDGEGTVLLTETVQLGP 171
Query: 187 NRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
RNP T+ ++E E+ A LG + IWLPRGL G
Sbjct: 172 ERNPGWTREEVEAEIHAMLGTRRAIWLPRGLTG 204
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ N G++ F D + D A + + FP+ V ++ AR I GGG IHC+TQ
Sbjct: 284 SYINHYLCNDGVVLCGFDDPR-DEIAAGIFRRLFPRRTVTLVD-ARTIFAGGGGIHCVTQ 341
Query: 298 QQPAI 302
QQP +
Sbjct: 342 QQPKV 346
>gi|110004598|emb|CAK98935.1| conserved hypothetical peptidyl-arginine deiminase protein
[Spiroplasma citri]
Length = 387
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 119/224 (53%), Gaps = 18/224 (8%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+ TP G+ +P E H Q WM WP D + DA AQ++FA VA IS +EPV
Sbjct: 5 LTTTPQEEGFYLPGETSNHIQTWMIWP---HMKDKQQKDAFPAQKIFALVAKIISNYEPV 61
Query: 63 TVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
+ + + + L NI +I+ SW RD G ++N+ +
Sbjct: 62 QMIVNEQNYLRVKKMLANSNINLIKTHYYDSWARDIGALYLLNEKGEH--------GAVS 113
Query: 122 WNFNSWGGVDDGCYR------DWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGT 175
+ FN WG + + D+++D +VA + +T + + +VLE GSI+VDGEGT
Sbjct: 114 FEFNGWGMQNSLMLKAKNFKWDYNVDNKVAITMANTSGVDYYVCPLVLESGSINVDGEGT 173
Query: 176 CLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
TTEECLLN NRNP LTK +I+ LK YL V KIIW+PRGL+
Sbjct: 174 LYTTEECLLNPNRNPTLTKLEIKQYLKQYLNVKKIIWIPRGLYN 217
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 227 KPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGI 279
K R+ G R ASY+NF+ N +I+P FGD +D +A+ VL + FPK +V+ I
Sbjct: 298 KHRMPGFRPPASYLNFHFVNKALISPIFGDPVYDQKAIMVLRKCFPKRKVIPI 350
>gi|359775171|ref|ZP_09278513.1| hypothetical protein ARGLB_012_00370 [Arthrobacter globiformis NBRC
12137]
gi|359307553|dbj|GAB12342.1| hypothetical protein ARGLB_012_00370 [Arthrobacter globiformis NBRC
12137]
Length = 324
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 150/335 (44%), Gaps = 72/335 (21%)
Query: 26 MGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVI 85
M +P L + + A A+ V+A VA A +FEPVT+ + A L + V+
Sbjct: 1 MAFPTGGYTLGDTAEAAHAARSVWAAVANAAVEFEPVTMVVDPSDVGTAARYLSPAVEVL 60
Query: 86 EMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDLQVA 145
+N +W RD GPT V++ A + +DW FN WG D + W D VA
Sbjct: 61 TAELNDAWMRDIGPTFVLDGKDA--------LGAVDWVFNGWGAQD---WASWDKDALVA 109
Query: 146 RKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYL 205
++ +V EGG I VDGEGT L TE L+ RNP L+K +E EL +
Sbjct: 110 AEVAGRSSARHLVSELVNEGGGIQVDGEGTVLVTETVQLDPGRNPGLSKADVEAELAGTI 169
Query: 206 GVMKIIWLPRGL------FG-----------------MIHDGE--AKPRLAGTRLAASYV 240
G K+IWLPRGL FG ++H + A P +R S++
Sbjct: 170 GATKVIWLPRGLTRDSQRFGTRGHVDIVAAIPSPGTLLVHSQQNPAHPDYEVSREIISFL 229
Query: 241 ----------------------------------NFYIANGGIITPQFGDKKWDGEAVRV 266
N + NGG+I F D D +A+R+
Sbjct: 230 SSTTDAAGREWSIVEVPAPVALTDPEGFVDYSYINHVVVNGGVIACTFADPN-DEKALRI 288
Query: 267 LSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
L+ A+P +VVGI+ ARE+ GG IHCITQQQPA
Sbjct: 289 LADAYPGRKVVGID-ARELFARGGGIHCITQQQPA 322
>gi|443623920|ref|ZP_21108406.1| putative agmatine deiminase [Streptomyces viridochromogenes Tue57]
gi|443342584|gb|ELS56740.1| putative agmatine deiminase [Streptomyces viridochromogenes Tue57]
Length = 349
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 116/213 (54%), Gaps = 13/213 (6%)
Query: 8 ALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCAS 67
A G+ MPAEW PH + WM WP D+ +D A+ +A VA A+ +FEPVTV
Sbjct: 4 AADGFRMPAEWTPHERTWMAWPGPNATFDD-AEDLAAARIAWAAVARAVRRFEPVTVVCG 62
Query: 68 AAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSW 127
Q AR+ L + I +E ++ +W RD GPT + N ++A +DW FN W
Sbjct: 63 PGQSAQARTLLGDGIETVERELDDAWMRDIGPTFLTNGKG--------ELAAVDWTFNGW 114
Query: 128 GGVDDGCYRDWSLDLQVARKILSTE-RLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNK 186
G D + W D ++A + + + +V EGG+IHVDGEGT L TE L
Sbjct: 115 GAQD---WARWENDAKIAAHVCDLAGSVKTYASELVNEGGAIHVDGEGTVLLTETVQLGP 171
Query: 187 NRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
RNPH T+ ++E E+ A+LG K IWLPRGL G
Sbjct: 172 ERNPHWTRERVEAEIHAHLGTRKAIWLPRGLTG 204
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ NGG++ F D + D A + + FP+ V ++ AR I GGG IHCITQ
Sbjct: 284 SYINHYLCNGGVVLCGFDDPR-DEIAAGIFRRLFPERTVTLVD-ARTIFAGGGGIHCITQ 341
Query: 298 QQP 300
QQP
Sbjct: 342 QQP 344
>gi|378551064|ref|ZP_09826280.1| hypothetical protein CCH26_13286 [Citricoccus sp. CH26A]
Length = 358
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 159/357 (44%), Gaps = 72/357 (20%)
Query: 13 LMPAEWEPHSQCWMGWPVRYERLDNWRDDAL-HAQRVFAKVATAISKFEPVTVCASAAQW 71
+MP EW PH + WM +P + + L A+ + VA I+++EPVTV
Sbjct: 4 VMPPEWAPHERTWMSFPTPNDTFGAPGSEGLGRARTAWTSVARTIARYEPVTVVTHPQDE 63
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
AR L ++ ++ ++ +W RD+GPT ++ + A ++ ++W FN WG
Sbjct: 64 AAARDLLGSDVEILPTVLDDAWMRDSGPTFTLDPTGA--------LSAVNWVFNGWGAQ- 114
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ W D +A + + P +V EGG HVDG+GT L TE L+ +RNP
Sbjct: 115 --PWARWDQDRHLAAAVAHHAQAPARDSRLVNEGGGFHVDGQGTVLLTETVQLDPDRNPG 172
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIH------ 222
LT+ +E E+ LG +WL RGL FG ++H
Sbjct: 173 LTRSAVEAEIHDQLGTTHAVWLSRGLTRDYDGFGTRGHVDIVASFTEAGTVLLHRQDDPG 232
Query: 223 ------------------DGEAKPRL-------AGTRLAASYVNF-----YIANGGIITP 252
D + +P + R A +V++ Y+ANG +I
Sbjct: 233 HPDHQVTRRLREELGGAVDAQGRPLRVVDVPAPSALRDAEGWVDYSYINHYVANGAVILC 292
Query: 253 QFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIPTNAAKL 309
FG+ D A +L +A+P V ++ AR+I GG IHCITQQQPA T+ L
Sbjct: 293 AFGEPAADARAAGILGEAYPGRAVELVD-ARDIFAFGGGIHCITQQQPAAGTDRGTL 348
>gi|398943947|ref|ZP_10670948.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM41(2012)]
gi|398158650|gb|EJM46990.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM41(2012)]
Length = 354
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 115/205 (56%), Gaps = 14/205 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
G++MPAEW H+ WM WP ++ W Q FA+VA AI++FEPV + +
Sbjct: 14 GWMMPAEWVRHAATWMVWPHNTALWESGWGVTLPQVQEDFARVANAIARFEPVKLVVDPS 73
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+A++ NI +IE+++N SW RD+GP+ V + +AG+ W FN+WGG
Sbjct: 74 AVASAKALCGPNIELIELAVNDSWCRDSGPSFVCHPQQG--------LAGVSWRFNAWGG 125
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
LD +AR+ L+ L F ++ EGG+IHVDGEGT +TTE LLN NRN
Sbjct: 126 -----KSAHDLDESLARRALNHLGLECFGTALSNEGGAIHVDGEGTLITTESVLLNPNRN 180
Query: 190 PHLTKGQIENELKAYLGVMKIIWLP 214
P + K ++E LGV K IWLP
Sbjct: 181 PGMNKAEMEEIFTRLLGVKKTIWLP 205
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
ASY NFYIANG II P +G D A VL+QAFP EVV + R + GGG +HC
Sbjct: 285 FCASYTNFYIANGAIIMPAYGIDA-DNVAAEVLAQAFPGREVVPV-RINHLAHGGGGVHC 342
Query: 295 ITQQQPAIPT 304
ITQQQPA P
Sbjct: 343 ITQQQPAWPV 352
>gi|407279213|ref|ZP_11107683.1| agmatine deiminase, partial [Rhodococcus sp. P14]
Length = 292
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 112/206 (54%), Gaps = 11/206 (5%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+ MPAE EPH + WM +P L + ++ A+ +A VA A+++FEPVTV A Q
Sbjct: 3 WRMPAESEPHERTWMAFPTEGYSLGDTAEEHHEARATWAAVAHAVAEFEPVTVVADPGQV 62
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
+ AR L ++ +IE +N +W RD GPT V++ + G+DW FN WG D
Sbjct: 63 DAARRYLSRDVELIEAPLNDAWMRDIGPTFVLHDDG--------RRGGVDWVFNGWGAQD 114
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ W D ++A +L + R ++V EGG I VDG GT L TE L+ RNP
Sbjct: 115 ---WARWDHDARIASFVLERAGVERVASTLVNEGGGIQVDGLGTVLLTETVQLDPGRNPD 171
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGL 217
L K +E EL+ +G +WLPRGL
Sbjct: 172 LGKAAVEAELRRTIGATCAVWLPRGL 197
>gi|227539660|ref|ZP_03969709.1| agmatine deiminase [Sphingobacterium spiritivorum ATCC 33300]
gi|227240302|gb|EEI90317.1| agmatine deiminase [Sphingobacterium spiritivorum ATCC 33300]
Length = 352
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 163/364 (44%), Gaps = 78/364 (21%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
++++ TP G+ PAEW P W+ WP + E +W +A+ A+++ +
Sbjct: 5 IDLSSTPKALGFSFPAEWAPQEAMWLSWPHKEE---SWPGKLETVYAPYAQFIKAVAEAQ 61
Query: 61 PVTVCASAAQWE----NARSQLPENIRVIEMSMN---GSWFRDTGPTIVVNKSSASSGAQ 113
V + + + + N + N+ IE N +W RD GP V+N+ S
Sbjct: 62 KVRINVADEEMKQFAWNHLNDAEANLANIEFYFNPTNDAWCRDHGPAFVLNQDSGEK--- 118
Query: 114 APKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGE 173
A +DW +N+WGG Y + LD V KI F +V+EGGS+ +G
Sbjct: 119 ----AVVDWGYNAWGGK----YPPFDLDDVVPTKIAQHFGHRLFTPPIVMEGGSVEFNGA 170
Query: 174 GTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG--------- 224
GT LTT CLLN+NRNPHL K QIE L + G +++WL G+ G DG
Sbjct: 171 GTVLTTTACLLNENRNPHLNKEQIEQYLLEFYGQDQVLWLGDGIVGDDTDGHIDDITRFI 230
Query: 225 ---------EAKP-------------RLAGTRLA------------------------AS 238
E+ P L RL AS
Sbjct: 231 NENTVVTVVESNPLDENYLLLQENLETLRSFRLKNGESLNIITLPMPSPVIHEDTRLPAS 290
Query: 239 YVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQ 298
Y NFYIAN ++ P F D D +A+ +L + FP +V+GI + +I+ G G+ HC++QQ
Sbjct: 291 YANFYIANEVVVVPVFNDVN-DEKALAILQECFPSRKVIGI-NSVDIIWGLGSFHCLSQQ 348
Query: 299 QPAI 302
+P +
Sbjct: 349 EPLL 352
>gi|398869459|ref|ZP_10624825.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM78]
gi|398230318|gb|EJN16359.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM78]
Length = 350
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 113/205 (55%), Gaps = 14/205 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLD-NWRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
G++MPAEW H+ WM WP + +W Q FA+VA AI++FEPV + +
Sbjct: 10 GWMMPAEWARHAATWMVWPHNKALWESDWGVTLPLVQEDFARVANAIARFEPVKMVVDPS 69
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+A NI +IE+++N SW RD+GP+ V + +AG+ W FN+WGG
Sbjct: 70 VVASAERLCGPNIELIELAVNDSWCRDSGPSFVCHPQQG--------LAGVSWRFNAWGG 121
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
LD +AR+ L+ LP F + EGG+IHVDGEGT +TTE LLN NRN
Sbjct: 122 KSAH-----ELDESLARRALNRLGLPCFGTPLSNEGGAIHVDGEGTLITTESVLLNPNRN 176
Query: 190 PHLTKGQIENELKAYLGVMKIIWLP 214
P + K ++E LGV K IWLP
Sbjct: 177 PGMNKAEMEEIFARLLGVKKTIWLP 201
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
ASY NFYIANG II P +G + D A VL+QAFP EVV + R + GGG +HC
Sbjct: 281 FCASYTNFYIANGAIIMPAYGIEA-DNAAAEVLAQAFPGREVVPV-RINHLAHGGGGVHC 338
Query: 295 ITQQQPAIPT 304
ITQQQPA P
Sbjct: 339 ITQQQPAWPV 348
>gi|300773806|ref|ZP_07083675.1| agmatine deiminase [Sphingobacterium spiritivorum ATCC 33861]
gi|300759977|gb|EFK56804.1| agmatine deiminase [Sphingobacterium spiritivorum ATCC 33861]
Length = 352
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 163/364 (44%), Gaps = 78/364 (21%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
++++ TP G+ PAEW P W+ WP + E +W +A+ A+++ +
Sbjct: 5 IDLSSTPKALGFSFPAEWAPQEAMWLSWPHKEE---SWPGKLETVYAPYAQFIKAVAEAQ 61
Query: 61 PVTVCASAAQWE----NARSQLPENIRVIEMSMN---GSWFRDTGPTIVVNKSSASSGAQ 113
V + + + + N + N+ IE N +W RD GP V+N+ S
Sbjct: 62 KVRINVADEEMKQFAWNHLNDAEANLANIEFYFNPTNDAWCRDHGPAFVLNQDSGEK--- 118
Query: 114 APKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGE 173
A +DW +N+WGG Y + LD V KI F +V+EGGS+ +G
Sbjct: 119 ----AVVDWGYNAWGGK----YPPFDLDDVVPTKIAQHFGHRLFTPPIVMEGGSVEFNGA 170
Query: 174 GTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG--------- 224
GT LTT CLLN+NRNPHL K QIE L + G +++WL G+ G DG
Sbjct: 171 GTVLTTTACLLNENRNPHLNKEQIEQYLLEFYGQDQVLWLGDGIVGDDTDGHIDDITRFI 230
Query: 225 ---------EAKP-------------RLAGTRLA------------------------AS 238
E+ P L RL AS
Sbjct: 231 NENTVVTVVESNPLDENYLLLQENLETLRSFRLKNGEPLNIITLPMPSPVIHEDTRLPAS 290
Query: 239 YVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQ 298
Y NFYIAN ++ P F D D +A+ +L + FP +V+GI + +I+ G G+ HC++QQ
Sbjct: 291 YANFYIANEVVVVPVFNDVN-DEKALAILQECFPTRKVIGI-NSVDIIWGLGSFHCLSQQ 348
Query: 299 QPAI 302
+P +
Sbjct: 349 EPLL 352
>gi|226187020|dbj|BAH35124.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length = 341
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 108/204 (52%), Gaps = 11/204 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAE EPH + WM +P L + ++ A+ +A VA A+++FEPVTV A+ E
Sbjct: 5 MPAESEPHERTWMAYPSAGYSLGDTAEEQHEARSTWAAVAHAVAEFEPVTVVVDPAEVEE 64
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
AR L E + ++E +N +W RD GPT V++ ++ G+DW FN WG
Sbjct: 65 ARKYLSEKVDIVEAPLNDAWMRDIGPTFVLSDEG--------RLGGVDWVFNGWGA---Q 113
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ W D ++ ++ +V EGG I VDG GT L TE L+ RNP LT
Sbjct: 114 GWAQWDKDSKIGAFVVEQSGAQLIDSPIVNEGGGIQVDGLGTVLVTETVQLDPGRNPDLT 173
Query: 194 KGQIENELKAYLGVMKIIWLPRGL 217
K IE EL +G +IWLPRGL
Sbjct: 174 KADIEAELARTIGAKHVIWLPRGL 197
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N + N G+I F D D EA R+LS A+P VV ++ AR + GG IHCITQ
Sbjct: 277 SYINHLVVNRGVIACSFDDPA-DAEAARILSAAYPGRTVVTVD-ARPLFERGGGIHCITQ 334
Query: 298 QQPA 301
QPA
Sbjct: 335 HQPA 338
>gi|357401933|ref|YP_004913858.1| agmatine deiminase [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|386357994|ref|YP_006056240.1| agmatine deiminase [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|337768342|emb|CCB77055.1| putative agmatine deiminase [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|365808502|gb|AEW96718.1| agmatine deiminase [Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 344
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 114/215 (53%), Gaps = 13/215 (6%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M PA G+ MP EW PH++ WM WP D +D A ++ +A VA A+++FEPV
Sbjct: 1 MTAPPAADGFRMPPEWAPHARTWMAWPSPNVTFDTEQDLA-GSRSAWAAVARAVARFEPV 59
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ A + AR+ L I V+ ++ +W RD GPT + ++A DW
Sbjct: 60 TMIARPEDADAARAALGPGIEVVARPLDDAWMRDIGPTFLTGGG---------RLAAADW 110
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN WG D + W D + ++ + R+ +V EGG IHVDGEGT L TE
Sbjct: 111 TFNGWGAQD---WASWEHDAAIGAEVAALAGATRYASRLVNEGGGIHVDGEGTVLLTETV 167
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
L+ RNP T+ Q+E EL +LG K +WLPRGL
Sbjct: 168 QLDPGRNPGWTRDQVEEELHGFLGTSKAVWLPRGL 202
>gi|365870411|ref|ZP_09409954.1| putative agmatine deiminase [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|421049476|ref|ZP_15512470.1| putative agmatine deiminase [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|363996683|gb|EHM17897.1| putative agmatine deiminase [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|392238079|gb|EIV63572.1| putative agmatine deiminase [Mycobacterium massiliense CCUG 48898]
Length = 340
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 153/349 (43%), Gaps = 72/349 (20%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+LMP E + + WM +P + + + A A+ +A VA AI FEPV++ A
Sbjct: 3 WLMPPETDAQERIWMAFPPQGASVFEDAESAHEARTAWAAVAHAIIDFEPVSMIVDPADR 62
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
A L I V+E ++ +W RD GPT V +VA +DW FN WG D
Sbjct: 63 AVAPKYLSREIDVVEAPLDDAWMRDIGPTFVRGTDG--------RVAAVDWVFNGWGARD 114
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ W D + R + + S+V EGG I VDGEGT L TE L+ +RNP
Sbjct: 115 ---WARWDNDAHIGRFVGQLAGVEIVSSSLVNEGGGIQVDGEGTVLVTETVQLDPSRNPG 171
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGL------FGM-------------------IHDGEA 226
L K +E EL +G +IWLPRGL FG + + A
Sbjct: 172 LDKRAVEAELARTIGARHVIWLPRGLTRDAERFGTRGHVDILVAIPSPGRLLVHVQNDPA 231
Query: 227 KPRLAGTR-----LAAS-----------------------------YVNFYIANGGIITP 252
P A T+ LA S Y+N + N G+I
Sbjct: 232 HPDHAITKEIVDLLAQSRDAKGKAWEITHIPAPAVLRDSESWVDYSYINHLVVNDGVIAC 291
Query: 253 QFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
+F D D A +L++ +P VV ++ AREI GG IHCITQQQPA
Sbjct: 292 RFDDSA-DDAATAILAEEYPGRRVVTVD-AREIFARGGGIHCITQQQPA 338
>gi|89094491|ref|ZP_01167430.1| Porphyromonas-type peptidyl-arginine deiminase [Neptuniibacter
caesariensis]
gi|89081227|gb|EAR60460.1| Porphyromonas-type peptidyl-arginine deiminase [Oceanospirillum sp.
MED92]
Length = 362
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 157/361 (43%), Gaps = 80/361 (22%)
Query: 3 MNGTPALHGYL---MPAEWEPHSQCWMGWPVRYERLDNWRDDAL-HAQRVFAKVATAISK 58
M+G P + MP E E H + WM + E W + L ++ A +A I +
Sbjct: 20 MSGKPVAQAHKKWHMPEEGEKHLRTWMAFGASRE---IWGAELLPEVRQDLADIANTIVE 76
Query: 59 FEPVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVA 118
+EPV + + A L I ++E ++ W RDTGP V ++S S
Sbjct: 77 YEPVAMLVRPHERAIAERLLDSRIELVEAGIDDLWMRDTGPIFVKDESKQKSA------- 129
Query: 119 GIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLT 178
ID+NFN WG + D VA K+ + +P S+VLEGG I VDG GT +
Sbjct: 130 -IDFNFNGWGN-----KQVHDQDALVAAKVAKSAGVPLIKTSLVLEGGCIEVDGLGTAII 183
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGM-IHDG------------- 224
TE C+LN NRNP +K + E+EL LG+ KIIWLP G+ GM I DG
Sbjct: 184 TESCVLNSNRNPGWSKARFEDELMPLLGLEKIIWLP-GIKGMDITDGHTDFYARFIRPGV 242
Query: 225 ----------------------------------------EAKPRLAGTRLAASYVNFYI 244
EA L+ +Y YI
Sbjct: 243 VAAGFDPDPHSFDHEVTLEHLDILRASTDARGAALKVHSLEAPSELSYPYADENYAAGYI 302
Query: 245 A----NGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
NG ++ +FGD + D A + L +AFP +++ + I GGG+IHC TQQ+P
Sbjct: 303 GFYVCNGAVLLQKFGDPRADRMAKQTLQEAFPDRDILQLS-IDGIAAGGGSIHCATQQEP 361
Query: 301 A 301
A
Sbjct: 362 A 362
>gi|359773325|ref|ZP_09276725.1| hypothetical protein GOEFS_088_00140 [Gordonia effusa NBRC 100432]
gi|359309546|dbj|GAB19503.1| hypothetical protein GOEFS_088_00140 [Gordonia effusa NBRC 100432]
Length = 322
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 145/335 (43%), Gaps = 72/335 (21%)
Query: 26 MGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVI 85
M +P L + D A+ ++ VA A+ EPVTV Q AR L + ++
Sbjct: 1 MAFPAPGYSLGDTDADHHEARSAWSAVANAVVDHEPVTVVVDPTQTAYARKYLSSAVELV 60
Query: 86 EMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDLQVA 145
E ++ +W RD GPT VV+ A V G+DW FN WG D + W D +A
Sbjct: 61 EAPLDDAWMRDIGPTFVVDD--------AGTVGGVDWVFNGWGAQD---WATWDHDEHIA 109
Query: 146 RKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYL 205
R ++ + +V EGG I VDG GT L TE L+ RNP L K +E EL L
Sbjct: 110 RTVIDHTGVNYIGSDLVNEGGGIQVDGIGTVLITETVQLDAGRNPTLAKADVEAELTRTL 169
Query: 206 GVMKIIWLPRGL------FG-----------------MIHD------------GEAKPRL 230
GV +IWLP GL FG +IHD + + L
Sbjct: 170 GVDTVIWLPCGLTRDSEEFGTRGHVDIVAAMPIPGTVLIHDQRNPDHPDHAVSQQIREVL 229
Query: 231 AGT-------------------RLAASYVNF-----YIANGGIITPQFGDKKWDGEAVRV 266
A + R A +V++ Y+ANG ++ F D D +A +
Sbjct: 230 ATSVNSAGDTLRIVDVPAPQTLRDAEGFVDYSYINHYVANGVVVACSFDDPS-DAQAADI 288
Query: 267 LSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
L +P VV ++ AR I GG IHCITQ QPA
Sbjct: 289 LGSVYPGRTVVSVD-ARAIFARGGGIHCITQNQPA 322
>gi|334344269|ref|YP_004552821.1| Agmatine deiminase [Sphingobium chlorophenolicum L-1]
gi|334100891|gb|AEG48315.1| Agmatine deiminase [Sphingobium chlorophenolicum L-1]
Length = 327
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 146/340 (42%), Gaps = 66/340 (19%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV-TVCASAAQ 70
+ MPAEW PH W+G+P + + ++A FA A K E V VCA
Sbjct: 3 FRMPAEWAPHDWTWIGFPTNPQEWPHAFENARRQIADFASALHADGKGEEVRLVCAHEGD 62
Query: 71 WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
+ AR + + +I + W RDT P I V + + + A +D+ FN WGG
Sbjct: 63 ADVARGLVAPGVTIIMQKLGDVWLRDTAP-IAVKRGT--------ERALVDFGFNGWGG- 112
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
D + ++ +T LP V EGG++ DG G +TTE+CLLN NRNP
Sbjct: 113 ----KYQMPGDEDIGARLAATTGLPTSTQHWVFEGGAVDTDGNGLFVTTEQCLLNPNRNP 168
Query: 191 HLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG---------------------EAKPR 229
L +G+IE L LG+ ++WL GL DG E P
Sbjct: 169 ELDRGKIETLLAGSLGLSDMLWLGDGLLNDHTDGHVDNLARFVGPGVLALPEASTEDDPN 228
Query: 230 LA----------------------------GTRLAASYVNFYIANGGIITPQFGDKKWDG 261
A G + ASY+NFY+ N +I P +G D
Sbjct: 229 AAIYADARARAKAFGVEVAPLPSPGRVVVDGEVIPASYMNFYVGNAAVIVPIYGQPN-DQ 287
Query: 262 EAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
A+ FP E+VG+ R+ I+ GGG+ HC +QQ P+
Sbjct: 288 AALDAFRPFFPGREIVGL-RSDAILSGGGSFHCCSQQMPS 326
>gi|229495122|ref|ZP_04388868.1| agmatine deiminase [Rhodococcus erythropolis SK121]
gi|229318053|gb|EEN83928.1| agmatine deiminase [Rhodococcus erythropolis SK121]
Length = 341
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 109/204 (53%), Gaps = 11/204 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAE EPH + WM +P L + ++ A+ +A VA A+++FEPVTV A+ E
Sbjct: 5 MPAESEPHERTWMAYPSAGYSLGDTAEEQHEARSTWAAVAHAVAEFEPVTVVVDPAEVEE 64
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
AR L E + ++E +N +W RD GPT V++ ++ G+DW FN WG D
Sbjct: 65 ARKYLSEKVDIVEAPLNDAWMRDIGPTFVLSDEG--------RLGGVDWVFNGWGAQD-- 114
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ W D ++ ++ +V EGG I VDG GT L T+ L+ RNP LT
Sbjct: 115 -WAHWDKDSKIGAFVVEQSGAQLIDSPIVNEGGGIAVDGLGTVLVTDTVQLDPGRNPDLT 173
Query: 194 KGQIENELKAYLGVMKIIWLPRGL 217
K IE EL +G +IWLPRGL
Sbjct: 174 KADIEAELARTIGAKHVIWLPRGL 197
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N + N G+I F D D EA R+L+ A+P VV ++ AR + GG IHCITQ
Sbjct: 277 SYINHLVVNRGVIACSFDDPA-DAEAARILAAAYPGRTVVTVD-ARPLFERGGGIHCITQ 334
Query: 298 QQPA 301
QPA
Sbjct: 335 HQPA 338
>gi|409426773|ref|ZP_11261312.1| peptidyl-arginine deiminase [Pseudomonas sp. HYS]
Length = 353
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 116/206 (56%), Gaps = 14/206 (6%)
Query: 10 HGYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEPVTVCASA 68
+G+ MPAEW H+ WM WP ++ W + Q FA+VA AI++FEPV +
Sbjct: 9 NGWFMPAEWARHAATWMVWPHNQALWESTWGVTLANVQADFARVANAIARFEPVKLVVDP 68
Query: 69 AQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWG 128
+ AR+ NI +IE+++N SW RD+GP+ + + +AG+ W FN+WG
Sbjct: 69 SAAAQARALCAANIELIEIAVNDSWCRDSGPSFICHPQQG--------LAGVSWRFNAWG 120
Query: 129 GVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNR 188
LD +AR++L+ LP F + EGG+IHVDG+GT +TTE LLN NR
Sbjct: 121 A-----KSAHDLDEGLARRVLNGLGLPCFGSFLANEGGAIHVDGDGTLITTESVLLNPNR 175
Query: 189 NPHLTKGQIENELKAYLGVMKIIWLP 214
NP L+K IE LGV K+IWLP
Sbjct: 176 NPGLSKNDIEEIFIRLLGVNKVIWLP 201
>gi|365865133|ref|ZP_09404796.1| putative peptidylarginine deiminase [Streptomyces sp. W007]
gi|364005429|gb|EHM26506.1| putative peptidylarginine deiminase [Streptomyces sp. W007]
Length = 343
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 112/209 (53%), Gaps = 15/209 (7%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALH-AQRVFAKVATAISKFEPVTVCASAAQ 70
+ MP EW PH + WM WP + D L A+R +A VA A+ +FEPVTV Q
Sbjct: 8 FRMPPEWAPHERTWMAWPGPNPTFAS--DAELDGARRAWAGVARAVRRFEPVTVVVGPGQ 65
Query: 71 WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
E A + L ++ ++ ++ +W RD GPT V + + +A +DW FN WG
Sbjct: 66 EEGAAALLGPDVELVVRPLDDAWMRDIGPTFVTDGRA---------LAAVDWTFNGWGA- 115
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
G R W D +AR + +P +V EGG+IHVDGEGT L TE L + RNP
Sbjct: 116 -QGWAR-WEHDQHIARAVAELTGVPVHSSPLVNEGGAIHVDGEGTVLLTETVQLGEERNP 173
Query: 191 HLTKGQIENELKAYLGVMKIIWLPRGLFG 219
T+ ++E E+ A LG K IWLPRGL G
Sbjct: 174 GWTRERVETEVHARLGTEKAIWLPRGLTG 202
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ N +I FGD + D EA + FP V ++ AR I GGG IHCITQ
Sbjct: 281 SYINHYLYNDAVILCAFGDPR-DEEAAAIFRGLFPDRTVTLVD-ARTIFAGGGGIHCITQ 338
Query: 298 QQPAI 302
QQP I
Sbjct: 339 QQPRI 343
>gi|418472025|ref|ZP_13041800.1| hypothetical protein SMCF_4780 [Streptomyces coelicoflavus ZG0656]
gi|371547367|gb|EHN75752.1| hypothetical protein SMCF_4780 [Streptomyces coelicoflavus ZG0656]
Length = 339
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 110/208 (52%), Gaps = 12/208 (5%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+ MP EW PH + WM WP + + A A+ +A VA A+ +FEPVT+ Q
Sbjct: 3 FRMPPEWAPHERTWMAWPGPNPTFTDPAELA-GARAAWASVARAVRRFEPVTMVHGPGQG 61
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
+ AR L ++ ++E ++ +W RD GPT V + +A +DW FN WG +
Sbjct: 62 DTARELLGPDVDLVERELDDAWMRDIGPTFVTDGQGG--------LAAVDWVFNGWGAQE 113
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ W D ++AR + +P +V EGG+IHVDGEGT L T+ L RNP
Sbjct: 114 ---WARWEHDSKIARHVADLAGVPALSSPLVNEGGAIHVDGEGTVLLTDTVQLGSGRNPG 170
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGLFG 219
T+ Q+E E+ A LG K IWLP GL G
Sbjct: 171 WTRAQVEAEIHAKLGTSKAIWLPHGLAG 198
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ NGG++ FGD D A + + P V ++ AR I GGG IHCITQ
Sbjct: 277 SYINHYVCNGGVVLCAFGDPH-DEIAAGIFRRLHPGRTVTLVD-ARTIFAGGGGIHCITQ 334
Query: 298 QQPAI 302
QQP I
Sbjct: 335 QQPKI 339
>gi|118361985|ref|XP_001014220.1| Porphyromonas-type peptidyl-arginine deiminase family protein
[Tetrahymena thermophila]
gi|89295987|gb|EAR93975.1| Porphyromonas-type peptidyl-arginine deiminase family protein
[Tetrahymena thermophila SB210]
Length = 695
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 144/342 (42%), Gaps = 82/342 (23%)
Query: 23 QCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENI 82
Q WMG+P + WR Q+ +A ISK+EPV + + L N+
Sbjct: 366 QTWMGFPNDPQI---WRRSLKGVQQDIVYLAKTISKYEPVNLIVDSENTRKFVESLLSNV 422
Query: 83 RVIEM--------SMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGC 134
++ +N W RDTG T V++ + KV +D+NFN WG
Sbjct: 423 NIVSQFDLTLVVQPINDLWLRDTGATFVLDTLNK-------KVKAVDFNFNGWGN----- 470
Query: 135 YRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTK 194
+ + D ++A+ I ++ +VLEGG + VDGEGT + + C+LNKNRNP TK
Sbjct: 471 KQKHNKDEKIAKFITQYNQIELISTDLVLEGGGLEVDGEGTAILAQSCILNKNRNPGWTK 530
Query: 195 GQIENELKAYLGVMKIIWLPRGLFGMIHD----------GEAKP---------------- 228
Q+E EL LG+ K IW+P I D GE+KP
Sbjct: 531 SQVEEELAYLLGITKFIWVPGVRNAEITDGHIDFYARFVGESKPGYVLVHMDSEDPSTLQ 590
Query: 229 --------------------------------RLAGTRLAASYVNFYIANGGIITPQFGD 256
+ G A Y NFY+AN +I FGD
Sbjct: 591 NYQIINSSTDAKGRKLKAIPLQIPNPDKIRNTLIKGDDSAIGYCNFYLANNAVILANFGD 650
Query: 257 KKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQ 298
+ D A +VL FP+ V+ + IV GGG++HC TQQ
Sbjct: 651 TEADESARQVLQNMFPE-RVIEMISIDNIVNGGGSVHCSTQQ 691
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 117/244 (47%), Gaps = 37/244 (15%)
Query: 8 ALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCAS 67
A Y MP E PH + WMG+P Y W + Q+ A++A ISK+EP+ +
Sbjct: 21 AQSNYFMPHEDTPHQRTWMGFPNDYSI---WDVNLTKVQQEIAQIAKTISKYEPLNLIVD 77
Query: 68 AAQWENARSQLPENIRVIEM--------SMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
+ + L NI ++ +N W RDTG T V + + K+ G
Sbjct: 78 SDATKQLAQSLLSNINIVSQFPITLVIQPINDLWLRDTGATFVFD-------LKNQKLGG 130
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTT 179
+D+NFN WG Y D +A I + +++ R S+V+EGG + VDGEGT +
Sbjct: 131 VDFNFNGWGNKQKHNY-----DQNIANFITTYDKIQRITTSLVMEGGGLEVDGEGTAILA 185
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASY 239
E C+LN NRNP +K Q+E EL LG+ K IW+ P + GT + +
Sbjct: 186 ESCILNINRNPGWSKSQVEQELSYLLGIKKFIWV--------------PGVKGTEITDGH 231
Query: 240 VNFY 243
++FY
Sbjct: 232 IDFY 235
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 230 LAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFP--KYEVVGIERAREIVL 287
+ G A Y NFY+ N +I FGD+ D A ++L AFP E+V I+ IV
Sbjct: 294 VKGDSSAVGYCNFYLLNNAVILANFGDQAADQNAKQILQNAFPGRTIEMVAIDN---IVN 350
Query: 288 GGGNIHCITQQ 298
GGG++HC TQQ
Sbjct: 351 GGGSVHCSTQQ 361
>gi|302670561|ref|YP_003830521.1| agmatine deiminase AguA [Butyrivibrio proteoclasticus B316]
gi|302395034|gb|ADL33939.1| agmatine deiminase AguA [Butyrivibrio proteoclasticus B316]
Length = 436
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 122/270 (45%), Gaps = 58/270 (21%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N P G+ MPAE+ H M +PVR +W D A FA V I K E +
Sbjct: 6 NSVPKQDGFYMPAEYSRHDGTIMIYPVR---PGSWGKDRSGALYSFANVFIEILKREYLY 62
Query: 64 VCASAAQWENARSQLPENIR---------------------------------------- 83
+ A W A+ L E I
Sbjct: 63 LIADKEHWMEAKDFLKEIIADYVEGIGDLVTPITDEEEERILLSAESMRKIANISTAAEV 122
Query: 84 ------VIEMSMNGSWFRDTGPTIVV------NKSSASSGAQAPK--VAGIDWNFNSWGG 129
V+ + + +W RD GPT V+ N+S + P+ + GI+W+FN+WGG
Sbjct: 123 LENRYLVMPIDSDDAWARDVGPTFVIRNRKLDNESDKRDLEETPRPEIRGINWSFNAWGG 182
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEECLLNKNR 188
DG Y W D VA+ L + VLEGGSIH DGEGTC+ TE CLL+ R
Sbjct: 183 EVDGLYASWDKDDLVAKGFCDKIDLDYYSAEPFVLEGGSIHCDGEGTCMVTESCLLSAGR 242
Query: 189 NPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
NP +TK QIE+ LK YLGV K++WLPRG++
Sbjct: 243 NPKMTKNQIEDRLKEYLGVEKVLWLPRGIY 272
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGE--AVRVLSQAFPKYEVVGIERAREIV 286
R G RLAASYVNFY N + PQFG + D + A+ +L + P E++GI AR+I+
Sbjct: 357 REVGERLAASYVNFYFVNDAALIPQFGGENEDSDLRALEILGKLLPDREIIGIP-ARDIL 415
Query: 287 LGGGNIHCITQQQP 300
LGGGNIHCITQQ P
Sbjct: 416 LGGGNIHCITQQIP 429
>gi|398851453|ref|ZP_10608138.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM80]
gi|398246693|gb|EJN32173.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM80]
Length = 350
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 113/205 (55%), Gaps = 14/205 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
++MPAEW H+ WM WP ++ WR Q FA+VA AI+ FEPV + +
Sbjct: 10 AWMMPAEWVTHAATWMVWPHNQTLWESGWRVTLAQVQDDFARVANAIALFEPVKLVVDPS 69
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+A++ NI +I +++N SW RD+GPT V + +AG+ W FN+WGG
Sbjct: 70 AIASAKALCGPNIELIPLAVNDSWCRDSGPTFVCHPQQG--------LAGVSWRFNAWGG 121
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
LD +AR+ L+ L F + EGG+IHVDG+GT +TTE LLN NRN
Sbjct: 122 -----KSAHDLDESLARRALNHLGLECFGTPLSNEGGAIHVDGQGTLITTESVLLNPNRN 176
Query: 190 PHLTKGQIENELKAYLGVMKIIWLP 214
P ++K ++E LGV K IWLP
Sbjct: 177 PGMSKAEMEETFSRLLGVKKTIWLP 201
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
ASY NFYIANG II P +G + D A VL +AFP EVV ++ + GGG +HC
Sbjct: 281 FCASYTNFYIANGAIIMPAYGIEA-DHVAANVLEKAFPGREVVPVQ-INHLAHGGGGVHC 338
Query: 295 ITQQQPAIPT 304
ITQQQPA P
Sbjct: 339 ITQQQPAWPV 348
>gi|386855236|ref|YP_006259413.1| peptidyl-arginine deiminase [Deinococcus gobiensis I-0]
gi|379998765|gb|AFD23955.1| Porphyromonas-type peptidyl-arginine deiminase [Deinococcus
gobiensis I-0]
Length = 338
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 153/345 (44%), Gaps = 73/345 (21%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWE- 72
MPAEW H+ WM WP E W + FA++ +++FEPV + ++ E
Sbjct: 1 MPAEWAAHAATWMSWPADDEL---WFGHLEPVRAEFAELVRTVARFEPVQLLVRDSESEQ 57
Query: 73 NARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
+AR++L N+ + ++ W RD GP V G +A +A ++W FN+WGG
Sbjct: 58 DARARLHGANVAYHHVPLDDVWLRDNGPIFV----RRGEGREA-DLAFVNWRFNAWGGKF 112
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ + D +V + + + VLEGG I V+G G LTT C L RNP
Sbjct: 113 ESDHDD-----RVPEYVAQALGMAHWDRPEVLEGGGIEVNGLGLGLTTRSCFLTDTRNPG 167
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG------------------EAKP----- 228
L++ L LG+ K++WL GL DG E+ P
Sbjct: 168 LSEEGYAALLAETLGIRKLLWLDGGLENDHTDGHIDTITRFVDETTVVTSVESDPADPNH 227
Query: 229 -------------------------------RLAGT--RLAASYVNFYIANGGIITPQFG 255
RL G RL +Y NFYI NG + PQ+G
Sbjct: 228 AVMARNLAALREMTDTAGEPLRVVELPLPANRLDGAEGRLPPTYANFYIGNGFVAVPQYG 287
Query: 256 DKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
D DG A+ VL FP EV+G+ +R I+ GGG+ HC+TQQQP
Sbjct: 288 DPH-DGPALDVLRPLFPGREVIGLS-SRAIIEGGGSFHCVTQQQP 330
>gi|397679587|ref|YP_006521122.1| agmatine deiminase [Mycobacterium massiliense str. GO 06]
gi|418248362|ref|ZP_12874748.1| putative agmatine deiminase [Mycobacterium abscessus 47J26]
gi|420939366|ref|ZP_15402635.1| putative agmatine deiminase [Mycobacterium massiliense 1S-152-0914]
gi|420941842|ref|ZP_15405099.1| putative agmatine deiminase [Mycobacterium massiliense 1S-153-0915]
gi|420946981|ref|ZP_15410231.1| putative agmatine deiminase [Mycobacterium massiliense 1S-154-0310]
gi|353452855|gb|EHC01249.1| putative agmatine deiminase [Mycobacterium abscessus 47J26]
gi|392144881|gb|EIU70606.1| putative agmatine deiminase [Mycobacterium massiliense 1S-152-0914]
gi|392149269|gb|EIU74983.1| putative agmatine deiminase [Mycobacterium massiliense 1S-153-0915]
gi|392154011|gb|EIU79717.1| putative agmatine deiminase [Mycobacterium massiliense 1S-154-0310]
gi|395457852|gb|AFN63515.1| Putative agmatine deiminase [Mycobacterium massiliense str. GO 06]
Length = 340
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 152/349 (43%), Gaps = 72/349 (20%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+LMP E + + WM +P + + A A+ +A VA AI FEPV++ A
Sbjct: 3 WLMPPETDAQERIWMAFPPQGASVFEDAKSAHEARTAWAAVAHAIIDFEPVSMIVDPADR 62
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
A L I V+E ++ +W RD GPT V +VA +DW FN WG D
Sbjct: 63 AVAPKYLSREIDVVEAPLDDAWMRDIGPTFVRGTDG--------RVAAVDWVFNGWGARD 114
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ W D + R + + S+V EGG I VDGEGT L TE L+ +RNP
Sbjct: 115 ---WARWDNDAHIGRFVGQLAGVEIVSSSLVNEGGGIQVDGEGTVLVTETVQLDPSRNPG 171
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGL------FGM-------------------IHDGEA 226
L K +E EL +G +IWLPRGL FG + + A
Sbjct: 172 LDKRAVEAELARTIGARHVIWLPRGLTRDAERFGTRGHVDILVAIPSPGRLLVHVQNDPA 231
Query: 227 KPRLAGTR-----LAAS-----------------------------YVNFYIANGGIITP 252
P A T+ LA S Y+N + N G+I
Sbjct: 232 HPDHAITKEIVDLLAQSRDAKGKAWEITHIPAPAVLRDSESWVDYSYINHLVVNDGVIAC 291
Query: 253 QFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
+F D D A +L++ +P VV ++ AREI GG IHCITQQQPA
Sbjct: 292 RFDDSA-DDAATAILAEEYPGRRVVTVD-AREIFARGGGIHCITQQQPA 338
>gi|398985682|ref|ZP_10691179.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM24]
gi|399016241|ref|ZP_10718474.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM16]
gi|398105975|gb|EJL96039.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM16]
gi|398153839|gb|EJM42332.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM24]
Length = 350
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 112/205 (54%), Gaps = 14/205 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
++MPAEW H+ WM WP ++ WR Q FA+VA AI++FEPV + +
Sbjct: 10 AWMMPAEWVTHAATWMVWPHNQTLWESGWRVTLAQVQEDFARVANAIARFEPVKLVIDPS 69
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+A++ NI +I + +N SW RD+GPT V + +AG+ W FN+WGG
Sbjct: 70 AIASAKALCGPNIELIPLDVNDSWCRDSGPTFVCHPQQG--------LAGVSWRFNAWGG 121
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
LD +AR+ L+ L F + EGG+IHVDGEGT +TTE LLN NRN
Sbjct: 122 -----KSAHDLDESLARRALNHLGLECFGTPLSNEGGAIHVDGEGTLITTESVLLNPNRN 176
Query: 190 PHLTKGQIENELKAYLGVMKIIWLP 214
P + K ++E LGV K IWLP
Sbjct: 177 PGIGKAEMEAIFSRLLGVKKTIWLP 201
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
ASY NFYIANG II P +G + D A +VL QAFP EVV + R + GGG +HC
Sbjct: 281 FCASYTNFYIANGAIIMPAYGIEA-DNVASKVLEQAFPGREVVPV-RINHLAHGGGGVHC 338
Query: 295 ITQQQPAIP 303
ITQQQPA P
Sbjct: 339 ITQQQPAWP 347
>gi|373253484|ref|ZP_09541602.1| Agmatine deiminase [Nesterenkonia sp. F]
Length = 376
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 163/359 (45%), Gaps = 73/359 (20%)
Query: 2 EMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDAL-HAQRVFAKVATAISKFE 60
E +GT A MP EW PH++ WM +P E +L A+ + +VA I+ E
Sbjct: 17 EPSGTAASLATTMPPEWAPHARTWMAFPPANETFGPQGSASLDRARTAWTQVAWTIAAAE 76
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
VTV A A E AR L E + ++ + ++ +W RD G T V S GA VAG+
Sbjct: 77 AVTVVADPADAEAARQALGEVVEIVTLPLDDAWMRDIGLTFV----HTSDGA----VAGV 128
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DW FN WG D + S D QV + L R +V EGG+ H+DG GT L T
Sbjct: 129 DWIFNGWG---DQPWAPHSRDAQVGAAMAEAAGLERIGSQLVNEGGAFHLDGRGTVLLTR 185
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL------FG--------------- 219
+ +RNP LT +IE EL LG +W PRGL FG
Sbjct: 186 TVQCDPDRNPGLTAEEIEQELHTRLGTRHAVWFPRGLTRDYDEFGTRGHVDMFACFTPSG 245
Query: 220 --MIH--DGEAKPRLAGTR-----LAAS-----------------------------YVN 241
++H D A P TR L AS Y+N
Sbjct: 246 AVLLHRQDDPAHPDHEVTRQMREVLEASVDADGRPLRIIDVPAPRTLRDEDEFVDWTYIN 305
Query: 242 FYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
Y+A+G ++ + D + D +A +L++A+P V ++ AR+I+ GG IHCITQQQP
Sbjct: 306 HYVADGMVVLCAYDDPQ-DEQAAAILAEAYPDRRVELVD-ARDILRFGGGIHCITQQQP 362
>gi|294053731|ref|YP_003547389.1| Agmatine deiminase [Coraliomargarita akajimensis DSM 45221]
gi|293613064|gb|ADE53219.1| Agmatine deiminase [Coraliomargarita akajimensis DSM 45221]
Length = 351
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 153/357 (42%), Gaps = 75/357 (21%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP GY +PAEWE W WPVR D W + A + ++FEPV +
Sbjct: 7 TPKELGYRLPAEWEAQEAVWFAWPVRD---DLWDGVLPKVREQLAALYVLAARFEPVRIL 63
Query: 66 ASAAQWENARSQL-----PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
+ ++ R ++ N+ + + + W RD GP ++N ++ ++A
Sbjct: 64 CPESAQDDLRERMNAVGDSSNVELYDYETDDVWIRDFGPLFLMN-------SEGTELAIS 116
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
DW +N+WG RD + +A + L RF VLEGG+I +G G +TTE
Sbjct: 117 DWIYNAWGNKFPKQARDNAASAWIAEAL----GLRRFALDSVLEGGAIESNGTGLLMTTE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL----------------------- 217
LLN NRN + + IE L LGV ++WL GL
Sbjct: 173 AVLLNPNRNGDVERVSIERRLMTGLGVDSVLWLSEGLVGDDTDGHIDNLARFFKPDGILV 232
Query: 218 ----------FGMIHDGEAKPR----------------------LAGTRLAASYVNFYIA 245
+ ++ D + R L G LAASY+N+ +
Sbjct: 233 AEANEPHDPNYRVLQDNLERIREFTTVDGSPFASIQLPLPDPITLDGEPLAASYMNYLVL 292
Query: 246 NGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
NG ++ P + + D EA+ ++ FP EV+G + +IV GG IHC++Q QPA+
Sbjct: 293 NGAVLVPTYQQAQRDQEALEIIGDCFPNREVIGFD-CCDIVREGGAIHCMSQHQPAV 348
>gi|373486921|ref|ZP_09577592.1| Agmatine deiminase [Holophaga foetida DSM 6591]
gi|372010874|gb|EHP11477.1| Agmatine deiminase [Holophaga foetida DSM 6591]
Length = 341
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 160/356 (44%), Gaps = 88/356 (24%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWE- 72
MPAEWEPH+ W+ WP E +W Q V+A + +++ E V + A+ E
Sbjct: 4 MPAEWEPHAATWLAWPHNAE---DWPGKFAPIQWVYADIIRHLTRHERVELLVQDAEAEA 60
Query: 73 NARSQLPE------NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
AR L N+R+ + + W RD+G T V + + G++W FN+
Sbjct: 61 KARRILARANALNGNLRIHHLPTDRIWMRDSGCTFV---------QEGGHLKGVNWLFNA 111
Query: 127 WGGVDDGCYRDWSLDLQVAR---KILSTERLP--RFPHSMVLEGGSIHVDGEGTCLTTEE 181
W Y +W D QV +I E + R ++LEGGSI V+GEG LTTEE
Sbjct: 112 WAK-----YGNWQRDCQVGEAMARIAGAEPVQALRREGRVILEGGSIDVNGEGILLTTEE 166
Query: 182 CLLN--KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG-------------------- 219
CLL+ + RN LT+ E +LG+ K+IWL RG+ G
Sbjct: 167 CLLSEVQQRNAGLTRTGYERVFAEHLGIRKVIWLDRGIEGDDTHGHVDDITRFVAPDTIV 226
Query: 220 -MIHDGEAKP----------RLAGTR------------------------LAASYVNFYI 244
++ A P RL R L ASY NFYI
Sbjct: 227 TVVEPDPADPNHAPLAENLRRLKAERDLDGEPFRIVELPMPSPVFFEGRRLPASYGNFYI 286
Query: 245 ANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
ANG ++ P F D K D A+ +L++ FP E+VGI + + G G +HC+TQQQP
Sbjct: 287 ANGLVLVPTFNDPK-DRLALNLLAELFPDREIVGIHSG-DFIWGFGAMHCMTQQQP 340
>gi|145220137|ref|YP_001130846.1| peptidyl-arginine deiminase [Chlorobium phaeovibrioides DSM 265]
gi|145206301|gb|ABP37344.1| agmatine deiminase [Chlorobium phaeovibrioides DSM 265]
Length = 356
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 157/356 (44%), Gaps = 79/356 (22%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
Y MP EW PH W+ WP +L++W VFA++A+ +S E V + +
Sbjct: 6 YRMPPEWAPHKATWLSWP---HKLESWPGKFGPVPAVFAELASWLSSSEEVHINVLDREM 62
Query: 72 ENARSQLPENIRVIEMSM----------NGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
E A +L I E+ + N +W RD GP V + G ++ KV +D
Sbjct: 63 EAAARKLIMEIAHPELCIERIFFHSIPTNDAWCRDHGPNFVCR----ADGGKSDKVI-LD 117
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
W FN+WGG Y + D V ++ + L MVLEGG+I V+G G LTTE
Sbjct: 118 WEFNAWGGK----YEPFDDDNAVPSRVAALSGLTAVKPGMVLEGGAIDVNGAGLLLTTEA 173
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG----------------- 224
CLLN NRNP +++ +IE L +LG +IWL G+ G DG
Sbjct: 174 CLLNPNRNPLMSRSEIEENLYRWLGAETVIWLGEGIAGDDTDGHVDDMARFVNETTVVIA 233
Query: 225 -EAKPR------------------------LAGTRLAASYVNFY-------------IAN 246
E P L +L FY IAN
Sbjct: 234 VEDDPEDENHLPLQHNYQLLKGFADKHGKPLTVVKLPMPEPFFYEGERLPASYANFYIAN 293
Query: 247 GGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
++ P +G ++ D EA+ VL FP+ VVGI+ R++V G G IHC+T ++P +
Sbjct: 294 SVVLVPVYGCRR-DSEALAVLQSCFPERRVVGID-CRDLVWGLGAIHCVTHEEPLV 347
>gi|427411445|ref|ZP_18901647.1| hypothetical protein HMPREF9718_04121 [Sphingobium yanoikuyae ATCC
51230]
gi|425709735|gb|EKU72758.1| hypothetical protein HMPREF9718_04121 [Sphingobium yanoikuyae ATCC
51230]
Length = 330
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 149/341 (43%), Gaps = 64/341 (18%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV-TVCASAAQ 70
+ MPAEW PH W+G+P + D A FA A K E V V A+ A
Sbjct: 3 FRMPAEWAPHDWTWIGFPTSPDEWPGAFDGARRQIADFASALHADGKGEEVRLVVANEAD 62
Query: 71 WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
+ AR+ + + + ++ W RDT P V+N + A +D+ FN WGG
Sbjct: 63 ADAARALVAPGVTIAVHNLGDVWLRDTAPIAVLNGVTGER-------ALVDFGFNGWGG- 114
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
D + ++ +T + + V EGG+I DG G +TTE+CLLN NRNP
Sbjct: 115 ----KYQMPGDEDIGARLAATTGMATSTQNWVFEGGAIDTDGTGLFVTTEQCLLNPNRNP 170
Query: 191 HLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG-------------------------- 224
L +G+IE L LG+ ++WL GL DG
Sbjct: 171 DLDRGKIETLLAGALGLSDMLWLGDGLLNDHTDGHVDNLARFVAPGKLALPIATTPDDPN 230
Query: 225 -----EAKPR------------------LAGTRLAASYVNFYIANGGIITPQFGDKKWDG 261
+A+ R + G + ASY+NFY+ N +I P +G D
Sbjct: 231 TAIYADARARAKAHGVEVVDIPSPGLVLVDGEAIPASYMNFYVGNAAVIVPIYGQPN-DQ 289
Query: 262 EAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
A+ + FP ++VG+ R+ I+ GGG+ HC +QQ P++
Sbjct: 290 AALDAFAPFFPGRQIVGL-RSDAILSGGGSFHCCSQQMPSL 329
>gi|398904364|ref|ZP_10652236.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM50]
gi|398176016|gb|EJM63752.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM50]
Length = 350
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 146/304 (48%), Gaps = 27/304 (8%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
G++MPAEW H+ WM WP ++ W Q FA+VA AI++FEPV + +
Sbjct: 10 GWVMPAEWVRHAATWMVWPHNQALWESGWGVTLALVQEDFARVANAIARFEPVKMVVDPS 69
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+A++ NI +IE+++N SW RD+GP+ V + +AG+ W FN+WGG
Sbjct: 70 AVSSAQALCGSNIELIELAVNDSWCRDSGPSFVYHPQHG--------LAGVSWRFNAWGG 121
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
LD +AR+ L+ + F + EGG+IHVDGEGT +TTE LLN NRN
Sbjct: 122 -----KSAHDLDESLARRALNHLGVQCFGTPLSNEGGAIHVDGEGTLITTESVLLNPNRN 176
Query: 190 PHLTKGQIENELKAYLGVMKIIWL---PRGLFGMIHDGEAKPRLAGTRLAASYVNFYIAN 246
P ++K ++E LGV K IWL P + G + DG A R V+
Sbjct: 177 PGMSKAEMEEIFTRLLGVKKTIWLPGDPDHVTGDMTDGHVDGVCAFARPGVLLVDATHDK 236
Query: 247 GGIITPQFGDKKWDGEAVRVLSQAFP----KYEVVGIERAREIVLGGGNIHCITQQQPAI 302
+ + + RVL A K+E++ + A + V + C + I
Sbjct: 237 HSVYAEVVRENR------RVLELATDAQGRKFELIELYEASDAVDTDAEVFCASYTNFYI 290
Query: 303 PTNA 306
NA
Sbjct: 291 ANNA 294
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 69/150 (46%), Gaps = 2/150 (1%)
Query: 154 LPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWL 213
LP P + + HVDG L++ + H ++ E + L +
Sbjct: 200 LPGDPDHVTGDMTDGHVDGVCAFARPGVLLVDATHDKHSVYAEVVRENRRVLELATDAQG 259
Query: 214 PRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPK 273
+ +++ ASY NFYIAN II P +G D A +VL+QAFP
Sbjct: 260 RKFELIELYEASDAVDTDAEVFCASYTNFYIANNAIIMPAYGIDA-DHAAAKVLAQAFPD 318
Query: 274 YEVVGIERAREIVLGGGNIHCITQQQPAIP 303
+EVV + R + GGG +HCITQQQPA P
Sbjct: 319 HEVVPV-RINHLAHGGGGVHCITQQQPAWP 347
>gi|338708671|ref|YP_004662872.1| Agmatine deiminase [Zymomonas mobilis subsp. pomaceae ATCC 29192]
gi|336295475|gb|AEI38582.1| Agmatine deiminase [Zymomonas mobilis subsp. pomaceae ATCC 29192]
Length = 326
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 151/343 (44%), Gaps = 72/343 (20%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQR---VFAKVATAISKFEPVTVCASA 68
Y PAEW PHS W+G+P E L W +D AQR FAK A E V + A+
Sbjct: 3 YRQPAEWMPHSAVWIGFPSD-ESL--WLEDLEPAQREVIAFAKAVYAEGAGEKVFLVAAH 59
Query: 69 AQW-ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSW 127
+ + AR + E VI + W RD+GP + N+ + + FN W
Sbjct: 60 EEAAQKARQLIGEAAEVICHNFGDIWLRDSGPIFIANEQEKAVAL---------FRFNGW 110
Query: 128 GGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
G D D + + + + L VLEGGSI DG G +TTEECLLN N
Sbjct: 111 GN-----KYDLEGDQTIGKALAADTGLSILEKDWVLEGGSIDNDGHGLVVTTEECLLNPN 165
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG---------------------EA 226
RNP L++ I LK LG +I+WL +GL DG E+
Sbjct: 166 RNPDLSREDIALRLKNDLGFDQILWLKKGLLNDHTDGHVDNLARFVGFKHLVIPIAADES 225
Query: 227 KPR---------------LAGTRL-------------AASYVNFYIANGGIITPQFGDKK 258
P + TRL ASY+NFYI N ++ P + D K
Sbjct: 226 DPNRDIYEEATRSAVDLGIKVTRLPSPGKITLDEEIVPASYMNFYIGNAVVVVPLY-DAK 284
Query: 259 WDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
D ++ L+ FP +++G+ A I+ GGG+ HCI+QQ PA
Sbjct: 285 NDKAIIKALAPLFPDRQIIGLP-AHHILTGGGSFHCISQQWPA 326
>gi|381198862|ref|ZP_09906016.1| Agmatine deiminase [Sphingobium yanoikuyae XLDN2-5]
Length = 330
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 148/341 (43%), Gaps = 64/341 (18%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV-TVCASAAQ 70
+ MPAEW PH W+G+P + D A FA A K E V V A+ A
Sbjct: 3 FRMPAEWAPHDWTWIGFPTNPDEWPGAFDGARRQIADFASALHADGKGEEVRLVVANQAD 62
Query: 71 WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
+ AR+ + + + + W RDT P V+N + A +D+ FN WGG
Sbjct: 63 ADAARALVAPGVTIAVHRLGDVWLRDTAPIAVLNGVTGER-------ALVDFGFNGWGG- 114
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
D + ++ +T + + V EGG+I DG G +TTE+CLLN NRNP
Sbjct: 115 ----KYQMPGDEDIGARLAATTGMATSTQNWVFEGGAIDTDGTGLFVTTEQCLLNPNRNP 170
Query: 191 HLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG-------------------------- 224
L +G+IE L LG+ ++WL GL DG
Sbjct: 171 DLDRGKIETLLAGALGLSDMLWLGDGLLNDHTDGHVDNLARFVAPGKLALPIATTPDDPN 230
Query: 225 -----EAKPR------------------LAGTRLAASYVNFYIANGGIITPQFGDKKWDG 261
+A+ R + G + ASY+NFY+ N +I P +G D
Sbjct: 231 TAIYADARARAKAHGVDVVDIPSPGLVLVDGEAIPASYMNFYVGNAAVIVPIYGQPN-DQ 289
Query: 262 EAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
A+ + FP ++VG+ R+ I+ GGG+ HC +QQ P++
Sbjct: 290 AALDAFAPFFPGRQIVGL-RSDAILSGGGSFHCCSQQMPSL 329
>gi|225165607|ref|ZP_03727418.1| Agmatine deiminase [Diplosphaera colitermitum TAV2]
gi|224800142|gb|EEG18560.1| Agmatine deiminase [Diplosphaera colitermitum TAV2]
Length = 285
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/275 (34%), Positives = 127/275 (46%), Gaps = 67/275 (24%)
Query: 82 IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLD 141
+ + N +W RD GP V + Q +VA DW +N+WG Y + LD
Sbjct: 23 VTFYDHPTNDAWCRDHGPIFVKH-------TQTGEVALTDWAYNAWGDK----YPPYDLD 71
Query: 142 LQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENEL 201
Q+ I L RF + MVLEGGSI V+G+G LT+E+CLLNKNRNP L++ QIE L
Sbjct: 72 NQIPPGIARALGLRRFENDMVLEGGSIDVNGDGLLLTSEQCLLNKNRNPRLSREQIEQNL 131
Query: 202 KAYLGVMKIIWLPRGLFGMIHDGEA-------KP------------------------RL 230
+ YLGV I+WL G+ G DG KP RL
Sbjct: 132 RDYLGVTDILWLGEGIIGDDTDGHIDDMTRFYKPDGFITCVEPNTYDKNHALLAANLERL 191
Query: 231 AG------------------------TRLAASYVNFYIANGGIITPQFGDKKWDGEAVRV 266
G R+ ASY NF I N ++ P F K D EA +
Sbjct: 192 RGFRTPAGGKFDIVELPMPKPFGFQRQRVPASYANFLIINDAVLVPTFRQNKRDREACAI 251
Query: 267 LSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
++ FP E+V I+ ++ G G +HCI+QQQPA
Sbjct: 252 IATCFPNREIVPID-CYHLIWGLGTLHCISQQQPA 285
>gi|444431104|ref|ZP_21226275.1| hypothetical protein GS4_11_02670 [Gordonia soli NBRC 108243]
gi|443888153|dbj|GAC67996.1| hypothetical protein GS4_11_02670 [Gordonia soli NBRC 108243]
Length = 347
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 150/354 (42%), Gaps = 74/354 (20%)
Query: 8 ALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCAS 67
A+ G+ MP+E EP + WM +PV L + + A+R +A VA A++ +PVTV
Sbjct: 5 AVGGWRMPSETEPQDRVWMAYPVPGYSLGDTEAEQDEARRTWAAVAHAVADHQPVTVIVD 64
Query: 68 AAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSW 127
+ AR L I ++E ++ +W RD GPT V+ ++ +DW FN W
Sbjct: 65 PTEVGAARRHLSSGIDIVEAPLDDAWARDIGPTFVLGDDG--------RLGAVDWVFNGW 116
Query: 128 GGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
G + W D + R I MV EGG I VDG GT + TE L
Sbjct: 117 GA---ASWASWENDQHIGRLIAQLSGAELIESPMVNEGGGIQVDGHGTVMVTESVQLGDG 173
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIHDG 224
RNP +K ++E EL +GV +WLP GL FG ++HD
Sbjct: 174 RNPEWSKAEVEAELARTIGVDHAVWLPYGLTRDNETFGTRGHVDIVAALPAPGVVLLHD- 232
Query: 225 EAKPRLAGTRLAA-------------------------------------SYVNFYIANG 247
+ P R+ A SY+N + N
Sbjct: 233 QRDPAHPDHRITATLRELLDEATDATGTIFRIVDVPAPTVLRDTEGYVDYSYINHVVVND 292
Query: 248 GIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
+I F D D AV +LS+ +P+ VV ++ AR + GG IHCIT QP+
Sbjct: 293 AVIACSFDDPN-DAAAVAILSETYPERHVVSVD-ARPLFARGGGIHCITANQPS 344
>gi|77458597|ref|YP_348102.1| peptidyl-arginine deiminase [Pseudomonas fluorescens Pf0-1]
gi|77382600|gb|ABA74113.1| agmatine deiminase [Pseudomonas fluorescens Pf0-1]
Length = 350
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 116/205 (56%), Gaps = 14/205 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
G++MPAEW H+ WM WP ++ W Q FA+VA AI++FEPV + +
Sbjct: 10 GWMMPAEWVTHAATWMVWPHNQALWESGWGVTLPLVQEDFARVANAIARFEPVKMVVDPS 69
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+A++ NI +I +++N SW RD+GP+ VV+ +AG+ W FN+WGG
Sbjct: 70 AIASAKALCGPNIELIPLAVNDSWCRDSGPSFVVHPEQG--------LAGVSWRFNAWGG 121
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
LD +AR++L+ F ++ EGG+IHVDGEGT +TTE LLN NRN
Sbjct: 122 -----KSAHDLDESLARRVLNHLGGECFGTALSNEGGAIHVDGEGTLITTESVLLNPNRN 176
Query: 190 PHLTKGQIENELKAYLGVMKIIWLP 214
P ++K ++E LGV K IWLP
Sbjct: 177 PGVSKAEMEEIFSRLLGVKKTIWLP 201
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
ASY NFYIANG II P +G + D A + L++AFP EVV ++ + GGG +HC
Sbjct: 281 FCASYTNFYIANGAIIMPAYGIEA-DHVAAQTLAEAFPGREVVPVQ-INHLAHGGGGVHC 338
Query: 295 ITQQQPAIPT 304
ITQQQPA P
Sbjct: 339 ITQQQPAWPV 348
>gi|85860729|ref|YP_462931.1| peptidylarginine deiminase-like protein [Syntrophus aciditrophicus
SB]
gi|85723820|gb|ABC78763.1| peptidylarginine deiminase related enzyme [Syntrophus
aciditrophicus SB]
Length = 392
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 155/360 (43%), Gaps = 76/360 (21%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTV- 64
TP GY P EW H+ W+ +P +W + + IS+ E V +
Sbjct: 46 TPKDLGYFFPPEWHRHAATWLSYP---HNEASWPGKIATIFPFYNQFIREISRGERVNIN 102
Query: 65 CASAAQWENARSQLP------ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVA 118
A+ A R L I + E N +W RD GP ++ A P
Sbjct: 103 VANEAMGRQVREALEIIGVNLAQISLYEHPTNDAWCRDHGPAFLI----ARRPELRPGKV 158
Query: 119 GIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLT 178
++W +N+WG LD + R++ S+ LP F +V+EGG++ +G GT LT
Sbjct: 159 IVNWEYNAWGN-----KYPHGLDNAIPRRVASSLGLPVFSPGIVMEGGAVDFNGGGTVLT 213
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGE------------- 225
T CLL++NRNP L +GQIE L+ Y GV +++WL G+ G DG
Sbjct: 214 TRSCLLHENRNPGLNQGQIEQFLQDYYGVEQVLWLGEGIEGDDTDGHIDDMTRFVAPDTV 273
Query: 226 -----------------------AKPRLAGTR-------------------LAASYVNFY 243
K RL R L ASY NFY
Sbjct: 274 ITMVEPDRKDANFRPLRDNLKALKKMRLLNGRQLNIVEIPMPHPVFYDGQRLPASYANFY 333
Query: 244 IANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIP 303
I N G+I P F + D +A+ +LS+ FP V+GI+ EI+ G G+ HC++QQ+P P
Sbjct: 334 ICNAGVIVPTFQCVE-DQKAIDLLSRCFPDRSVIGIDSV-EIIWGLGSWHCLSQQEPESP 391
>gi|448926423|gb|AGE50000.1| agmatine deiminase [Paramecium bursaria Chlorella virus Can18-4]
Length = 212
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 112/213 (52%), Gaps = 13/213 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQ 70
G+ MP E++ HS WM +P R DNWR++A AQ +A + K+E VT+
Sbjct: 7 GFHMPGEFDKHSGTWMIFP---HRSDNWRNEARDAQEQLCALANLVGKYEKVTMLVPRRY 63
Query: 71 WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
A + ++ +I + +W RDTG V+N ++ G+ ++FN+WGG
Sbjct: 64 VRRALGLVSTDVSIIVKETDDAWMRDTGAVFVIN---------GKEIRGVSFDFNAWGGN 114
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
DG Y+ W LD +V + + + VLEGGS+HVDGEGT +TTEECLL+ RN
Sbjct: 115 IDGLYQSWDLDTEVGKYMCKARGFKMYTTPGFVLEGGSVHVDGEGTLITTEECLLSAGRN 174
Query: 190 PHLTKGQIENELKAYLGVMKIIWLPRGLFGMIH 222
PHLT+ +IE + + L R G +H
Sbjct: 175 PHLTRDKIETITNHHSRMSMANSLDRSHIGFLH 207
>gi|407364276|ref|ZP_11110808.1| peptidyl-arginine deiminase [Pseudomonas mandelii JR-1]
Length = 350
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 114/205 (55%), Gaps = 14/205 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
G+ MPAEW H+ WM WP ++ W Q FA+VA AI++FEPV + +
Sbjct: 10 GWWMPAEWVKHAATWMVWPHNQALWESGWGVTLPLVQEDFARVANAIARFEPVKMVVDPS 69
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+A++ NI +I +++N SW RD+GP+ V + + G+ W FN+WGG
Sbjct: 70 AIASAKALCGPNIELIPLAVNDSWCRDSGPSFVCHPQHG--------LGGVSWRFNAWGG 121
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
+LD +AR+ L+ +P F + EGG+IHVDGEGT +TTE LLN NRN
Sbjct: 122 KSLH-----NLDESLARRALNRLGVPCFGTPLSNEGGAIHVDGEGTLITTESVLLNPNRN 176
Query: 190 PHLTKGQIENELKAYLGVMKIIWLP 214
P +TK +IE LGV K IWLP
Sbjct: 177 PGMTKAEIEEIFTQLLGVKKTIWLP 201
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
ASY NFYIAN II P +G D A VL++AFP EVV + R + GGG +HC
Sbjct: 281 FCASYTNFYIANHAIIMPAYGIDA-DHAAAEVLARAFPGREVVPV-RINHLAHGGGGVHC 338
Query: 295 ITQQQPAIPT 304
ITQQQPA P
Sbjct: 339 ITQQQPAWPV 348
>gi|239990976|ref|ZP_04711640.1| putative peptidylarginine deiminase [Streptomyces roseosporus NRRL
11379]
gi|291447981|ref|ZP_06587371.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291350928|gb|EFE77832.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 343
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 115/217 (52%), Gaps = 15/217 (6%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M TPA + MP EW PH + WM WP + + A A+ +A VA A+ +FEPV
Sbjct: 1 MPTTPA--PFRMPPEWAPHERTWMAWPGPNPTFASDAELA-EARHAWAAVALAVRRFEPV 57
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ Q E A + L ++ ++ ++ +W RD GPT V + + +A +DW
Sbjct: 58 TMVVGPGQEEGAAALLGPDVELVVRPLDDAWMRDIGPTFVTDGRT---------LAAVDW 108
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN WG G R W D +AR + + +V EGG+IHVDGEGT L TE
Sbjct: 109 TFNGWGA--QGWAR-WENDQHIARAVAELTGVSAHSSPLVNEGGAIHVDGEGTVLLTETV 165
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
L K RNP ++ Q+E E+ A+LG K IWLPRGL G
Sbjct: 166 QLGKERNPGWSREQVEAEIHAHLGTEKAIWLPRGLTG 202
>gi|398838185|ref|ZP_10595467.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM102]
gi|398116747|gb|EJM06505.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM102]
Length = 350
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 145/304 (47%), Gaps = 27/304 (8%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
G++MPAEW H+ WM WP ++ W Q FA+VA AI++FEPV + +
Sbjct: 10 GWVMPAEWVRHTATWMVWPHNQALWESGWGVTLALVQEDFARVANAIARFEPVKMVVDPS 69
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+A++ NI +IE+++N SW RD+GP+ V + +AG+ W FN+WGG
Sbjct: 70 AVSSAQALCGPNIELIELAVNDSWCRDSGPSFVCHPQQG--------LAGVSWRFNAWGG 121
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
LD +AR+ L+ + F + EGG+IHVDGEGT +TTE LLN NRN
Sbjct: 122 -----KSAHDLDESLARRALNHLGVQCFGTPLSNEGGAIHVDGEGTLITTESVLLNPNRN 176
Query: 190 PHLTKGQIENELKAYLGVMKIIWL---PRGLFGMIHDGEAKPRLAGTRLAASYVNFYIAN 246
P + K ++E LGV K IWL P + G + DG A R V+
Sbjct: 177 PGMNKAEMEEIFTRLLGVKKTIWLPGDPDHVTGDMTDGHVDGVCAFARPGVLLVDATHDK 236
Query: 247 GGIITPQFGDKKWDGEAVRVLSQAFP----KYEVVGIERAREIVLGGGNIHCITQQQPAI 302
+ + + RVL A K+E++ + A + V + C + I
Sbjct: 237 HSVYAEVVRENR------RVLELATDAQGRKFELIELYEASDAVDTDAEVFCASYTNFYI 290
Query: 303 PTNA 306
NA
Sbjct: 291 ANNA 294
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 2/150 (1%)
Query: 154 LPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWL 213
LP P + + HVDG L++ + H ++ E + L +
Sbjct: 200 LPGDPDHVTGDMTDGHVDGVCAFARPGVLLVDATHDKHSVYAEVVRENRRVLELATDAQG 259
Query: 214 PRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPK 273
+ +++ ASY NFYIAN II P +G D A +VL+QAFP+
Sbjct: 260 RKFELIELYEASDAVDTDAEVFCASYTNFYIANNAIIMPAYGIDA-DHAAAKVLAQAFPE 318
Query: 274 YEVVGIERAREIVLGGGNIHCITQQQPAIP 303
+EVV + R + GGG +HCITQQQPA P
Sbjct: 319 HEVVPV-RINHLAHGGGGVHCITQQQPAWP 347
>gi|254514741|ref|ZP_05126802.1| agmatine deiminase [gamma proteobacterium NOR5-3]
gi|219676984|gb|EED33349.1| agmatine deiminase [gamma proteobacterium NOR5-3]
Length = 339
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 112/205 (54%), Gaps = 16/205 (7%)
Query: 10 HGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
+ + MPAEW H +CWM WP R DA ++ +A VA AI +FEPVT+
Sbjct: 7 YTHRMPAEWTAHDRCWMAWPCRA----GLWSDADGTRQHYADVAHAIRRFEPVTMLVPPK 62
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
A+ L +I + E+ ++ SW RD+GP V + S A +AG+ + FN+WG
Sbjct: 63 LTAEAKKYLGSDIDLFEVPIDDSWTRDSGPNFVHDGSGA--------LAGVCFGFNAWGN 114
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
Y+ + D ++A +IL + ++ EGG + VDGEGT LTT C NKNRN
Sbjct: 115 K----YQPYDQDARMAERILQRCDIRAIRSPLIAEGGGLCVDGEGTLLTTTSCFPNKNRN 170
Query: 190 PHLTKGQIENELKAYLGVMKIIWLP 214
P T+ IE ELK LGV K+IWLP
Sbjct: 171 PDWTQDAIEEELKTQLGVDKVIWLP 195
>gi|333919015|ref|YP_004492596.1| hypothetical protein AS9A_1344 [Amycolicicoccus subflavus DQS3-9A1]
gi|333481236|gb|AEF39796.1| hypothetical protein AS9A_1344 [Amycolicicoccus subflavus DQS3-9A1]
Length = 343
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 110/204 (53%), Gaps = 11/204 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAE PH + WM +P R L + + A+ +A VA I FEPVTV A+ + E
Sbjct: 7 MPAERAPHERTWMAFPCRGYSLGDTAEQQHAARSAWAAVANTIVDFEPVTVVAAPDEAEY 66
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
AR L I ++E +N +W RD GPT VV+ V ++W FN WG D
Sbjct: 67 ARRYLSSAIDILEAPLNDAWMRDIGPTFVVDDDGG--------VGAVNWIFNGWGAQD-- 116
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ W LD ++A + +PR +V EGG I VDGEGT L TE L+++RNP T
Sbjct: 117 -WAQWDLDERIAAFVADHLAVPRIDSPLVNEGGGIQVDGEGTVLVTETVQLDQDRNPGWT 175
Query: 194 KGQIENELKAYLGVMKIIWLPRGL 217
K +E EL +G K+IWLPRGL
Sbjct: 176 KADVETELARTIGAKKVIWLPRGL 199
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ANG +I F D D +A +L+ +P E+V ++ AR I GG IHCITQ
Sbjct: 279 SYLNHYVANGAVIACNFADPH-DQQAAEILASTYPGREIVTVD-ARPIFARGGGIHCITQ 336
Query: 298 QQPA 301
QPA
Sbjct: 337 NQPA 340
>gi|395499594|ref|ZP_10431173.1| peptidyl-arginine deiminase [Pseudomonas sp. PAMC 25886]
Length = 350
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 113/205 (55%), Gaps = 14/205 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
G MPAEW H+ WM WP ++ W Q FA+VA AI++FEPV + +
Sbjct: 10 GGWMPAEWARHAATWMVWPHNQALWESGWGVTLALVQEDFARVANAIARFEPVKMIVDPS 69
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+AR+ NI +IE+++N SW RD+GP+ V + +AG+ W FN+WGG
Sbjct: 70 AVASARALCGPNIALIELAVNDSWCRDSGPSFVCHPQHG--------LAGVSWRFNAWGG 121
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
LD +AR++L+ + + EGG+IHVDGEGT +TTE LLN NRN
Sbjct: 122 -----KSAHDLDESLARRVLNHLGVECLGTPLSNEGGAIHVDGEGTLITTESVLLNPNRN 176
Query: 190 PHLTKGQIENELKAYLGVMKIIWLP 214
P +TK +IE LGV K IWLP
Sbjct: 177 PGVTKAEIEEIFTRLLGVKKTIWLP 201
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 69/153 (45%), Gaps = 6/153 (3%)
Query: 154 LPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWL 213
LP P + + HVDG L++ + H ++ E + L +
Sbjct: 200 LPGDPDHVTGDMTDGHVDGVCAFARPGVLLVDATHDTHSVYAEVVRENRRALALATDARG 259
Query: 214 PRGLFGMIHDGEAKPRL--AGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAF 271
R F MI EA + ASY NFYIAN II P +G D A VL++AF
Sbjct: 260 RR--FEMIELYEATDAVDTEAEVFCASYTNFYIANHAIIMPAYGIDA-DQVAADVLARAF 316
Query: 272 PKYEVVGIERAREIVLGGGNIHCITQQQPAIPT 304
P VV + R + GGG +HCITQQQPA P
Sbjct: 317 PGRVVVPV-RINHLAHGGGGVHCITQQQPAWPV 348
>gi|408674092|ref|YP_006873840.1| Porphyromonas-type peptidyl-arginine deiminase [Emticicia
oligotrophica DSM 17448]
gi|387855716|gb|AFK03813.1| Porphyromonas-type peptidyl-arginine deiminase [Emticicia
oligotrophica DSM 17448]
Length = 346
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 164/362 (45%), Gaps = 82/362 (22%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAK---VATAISKFEPV 62
TP G+ PAEW PH W+ +P + D+W D +R++ AI++ E V
Sbjct: 2 TPKEQGFFFPAEWHPHRATWLSFP---QSSDSW-DYGERLERIYPSYMAFVKAITESENV 57
Query: 63 TVCASAAQWENARSQLPENIRV----IEMSM---NGSWFRDTGPTIVVNKSSASSGAQAP 115
+ A + + +L E + +E+ + N SW RD GP ++N +
Sbjct: 58 CINAKDEEHQALIWRLIEEYGIDKSKVEVPIHPNNDSWCRDHGPAFLINPETKQRMI--- 114
Query: 116 KVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGT 175
++W +N+WGG Y + D ++ KI LP +++EGGS+ +G+GT
Sbjct: 115 ----VEWGYNAWGGK----YPPYDDDDRIPIKIAEYLNLPYVVPGIIMEGGSVEFNGKGT 166
Query: 176 CLTTEECLLNKNRNPHLTKGQIE------------------------------------- 198
LT++ CLLN NRNPHL++ +IE
Sbjct: 167 VLTSKSCLLNPNRNPHLSQSEIEDYLRNYYGVEQVLWVTEGIVGDDTDGHIDDTTRFVNE 226
Query: 199 ---------NE-------LKAYLGVMKIIWLPRGL-FGMIHDGEAKPRL-AGTRLAASYV 240
NE LK L +K + LP G +I P +G RL ASY
Sbjct: 227 DTVLTVVEPNEEDDNYHPLKQNLEDLKAMRLPNGQPLNIIELPMPDPVYDSGVRLPASYA 286
Query: 241 NFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
NF I N II P +G K D A+ ++ + FPK++VVGI A EI+ G G+ HC++QQ+P
Sbjct: 287 NFLITNKSIIVPTYGCDK-DDLALSIIQECFPKHKVVGI-NATEIIWGLGSFHCLSQQEP 344
Query: 301 AI 302
I
Sbjct: 345 II 346
>gi|398971398|ref|ZP_10683606.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM30]
gi|398138954|gb|EJM27964.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM30]
Length = 350
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 114/206 (55%), Gaps = 14/206 (6%)
Query: 10 HGYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEPVTVCASA 68
+ ++MPAEW H+ WM WP ++ WR Q FA+VA AI++FEPV +
Sbjct: 9 NAWMMPAEWVTHAATWMVWPHNQALWESGWRVTLPLVQEDFARVANAIARFEPVKMVVDP 68
Query: 69 AQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWG 128
+ +A++ NI +I +++N SW RD+GP+ V + +AG+ W FN+WG
Sbjct: 69 SAVASAKALCGPNIELIPLAVNDSWCRDSGPSFVCHPQQG--------LAGVSWRFNAWG 120
Query: 129 GVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNR 188
G LD +AR+ L+ L F + EGG+IHVDGEGT +TTE LLN NR
Sbjct: 121 GKSAH-----ELDESLARRALNHLGLECFGTPLSNEGGAIHVDGEGTLITTESVLLNPNR 175
Query: 189 NPHLTKGQIENELKAYLGVMKIIWLP 214
NP + K ++E LGV K IWLP
Sbjct: 176 NPGIGKAEMEEIFSRLLGVKKTIWLP 201
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
ASY NFYIANG II P +G + D A +VL+QAFP EVV + R + GGG +HC
Sbjct: 281 FCASYTNFYIANGAIIMPAYGIEA-DEAAAKVLAQAFPGREVVPV-RINHLAHGGGGVHC 338
Query: 295 ITQQQPAIPT 304
ITQQQPA P
Sbjct: 339 ITQQQPAWPV 348
>gi|317125883|ref|YP_004099995.1| agmatine deiminase [Intrasporangium calvum DSM 43043]
gi|315589971|gb|ADU49268.1| agmatine deiminase [Intrasporangium calvum DSM 43043]
Length = 358
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 149/348 (42%), Gaps = 72/348 (20%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MP+E PH WM WP + L ++ A+ +A VA A+ FEPV + E
Sbjct: 24 MPSETAPHECTWMAWPSQGYTLGETPEEVTRARLTWAAVANAVIGFEPVRMVVVPEDVEI 83
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
AR L ++ +I ++ +W RD GPT V+ ++ +DW FN WG
Sbjct: 84 ARRHLHADVELIPTQLDDAWMRDIGPTFVLGADG--------RLGAVDWVFNGWGA---Q 132
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ W D +V + P S+V EGG +HVDG GT L TE L+ RNP LT
Sbjct: 133 PWASWEHDARVGAFVAGQTPAELIPSSLVNEGGGLHVDGLGTVLLTETVQLDPGRNPGLT 192
Query: 194 KGQIENEL-------------------------KAYLGVMKIIWLPRGLFGMIHDGEAKP 228
+ +E EL + ++ ++ I P L + + A P
Sbjct: 193 RTDVEAELARTIGATHAIWLPRGLTRDYDELGTRGHVDIVATIPSPGVLLLHVQEDPAHP 252
Query: 229 R----------LAGTRLAA------------------------SYVNFYIANGGIITPQF 254
L+ R A SY+N + N G+I F
Sbjct: 253 DHGVSKELRELLSDVRDARGERFEVVGVPAPRTLADGSGPVDWSYLNHLVVNDGVIACTF 312
Query: 255 GDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
D++ D A+ +L+ A+P VVG++ AR + GG +HCITQQQPA+
Sbjct: 313 ADEQ-DERALGILADAYPGRRVVGVD-ARPLFDRGGGVHCITQQQPAV 358
>gi|334706184|ref|ZP_08522050.1| peptidyl-arginine deiminase [Aeromonas caviae Ae398]
Length = 338
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 110/202 (54%), Gaps = 14/202 (6%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEPVTVCASAAQWE 72
MPAEW H+ WM WP +N W Q+ FA+V AI++FEPV + A
Sbjct: 1 MPAEWCRHAATWMVWPHNKALWENGWGVTLPQVQQDFARVVNAIARFEPVNLVVDPAAQA 60
Query: 73 NARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDD 132
AR+ + +R I + ++ SW RD+GPT + + + AGI W FN+WGG
Sbjct: 61 EARTLCGDGVRFIPLPVDDSWCRDSGPTFICHPELGT--------AGISWRFNAWGG--- 109
Query: 133 GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
LD +AR++L++ L + EGG+IHVDGEGT +TTE LLN NRNP +
Sbjct: 110 --KSAHGLDEGLARRVLNSLELECIGSFLANEGGAIHVDGEGTLITTESVLLNSNRNPGM 167
Query: 193 TKGQIENELKAYLGVMKIIWLP 214
TK +IE LG+ K IWLP
Sbjct: 168 TKVEIERIFSRQLGIEKTIWLP 189
>gi|398860248|ref|ZP_10615897.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM79]
gi|398234933|gb|EJN20789.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM79]
Length = 350
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 113/205 (55%), Gaps = 14/205 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
G++MPAEW H+ WM WP ++ W Q FA+VA AI++FEPV + +
Sbjct: 10 GWVMPAEWVRHTATWMVWPHNQALWESGWGVTLALVQEDFARVANAIARFEPVKMVVDPS 69
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+A + NI +IE+++N SW RD+GP+ V + +AG+ W FN+WGG
Sbjct: 70 AVSSAHALCGPNIELIELAVNDSWCRDSGPSFVCHPQQG--------LAGVSWRFNAWGG 121
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
LD +AR+ L+ + F + EGG+IHVDGEGT +TTE LLN NRN
Sbjct: 122 -----KSAHDLDESLARRALNHLGVQCFGTPLSNEGGAIHVDGEGTLITTESVLLNPNRN 176
Query: 190 PHLTKGQIENELKAYLGVMKIIWLP 214
P + K ++E LGV K IWLP
Sbjct: 177 PGMNKAEMEEIFTRLLGVKKTIWLP 201
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
ASY NFYIAN II P +G D A +VL+QAFP++EVV + R + GGG +HC
Sbjct: 281 FCASYTNFYIANNAIIMPAYGIDA-DHAAAKVLAQAFPEHEVVPV-RINHLAHGGGGVHC 338
Query: 295 ITQQQPAIP 303
ITQQQPA P
Sbjct: 339 ITQQQPAWP 347
>gi|152964801|ref|YP_001360585.1| agmatine deiminase [Kineococcus radiotolerans SRS30216]
gi|151359318|gb|ABS02321.1| Agmatine deiminase [Kineococcus radiotolerans SRS30216]
Length = 339
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 106/205 (51%), Gaps = 13/205 (6%)
Query: 14 MPAEWEPHSQCWMGWPVRYERL-DNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWE 72
MPAEWEPH + WM +P + D A+ ++ VA ++++EPVTV S A
Sbjct: 6 MPAEWEPHQRTWMAFPTPNPTFGEAGGPDLTRARAAWSTVANTVARYEPVTVLVSPADRT 65
Query: 73 NARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDD 132
AR L I V+E+ ++ +W RD+GPT V GAQ P +DW FN WG
Sbjct: 66 AAREALDPRIEVVEVPLDDAWLRDSGPTFV-------RGAQGP--VAVDWTFNGWGA--- 113
Query: 133 GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
+ W D +VAR + P + EGG HVDG GT L T+ L+ RNP
Sbjct: 114 QSWSRWEDDARVARFVAGRTGTPVSSSPLTQEGGGFHVDGAGTVLLTDTVQLDPGRNPGW 173
Query: 193 TKGQIENELKAYLGVMKIIWLPRGL 217
T+ Q+E E+ A LG IWLPRGL
Sbjct: 174 TREQVEAEVHAQLGTTTAIWLPRGL 198
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SYVN Y+AN ++ F D + D A VL+ A+P VV ++ AR++ GG IHCITQ
Sbjct: 278 SYVNHYVANSVVVLCAFDDPR-DARARAVLAAAYPDRAVVPVD-ARDVFAFGGGIHCITQ 335
Query: 298 QQPA 301
QQPA
Sbjct: 336 QQPA 339
>gi|420992230|ref|ZP_15455377.1| putative agmatine deiminase [Mycobacterium massiliense 2B-0307]
gi|392185014|gb|EIV10663.1| putative agmatine deiminase [Mycobacterium massiliense 2B-0307]
Length = 336
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/347 (32%), Positives = 150/347 (43%), Gaps = 72/347 (20%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MP E + + WM +P + + A A+ +A VA AI FEPV++ A
Sbjct: 1 MPPETDAQERIWMAFPPQGASVFEDAKSAHEARTAWAAVAHAIIDFEPVSMIVDPADRAV 60
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
A L I V+E ++ +W RD GPT V +VA +DW FN WG D
Sbjct: 61 APKYLSREIDVVEAPLDDAWMRDIGPTFVRGTDG--------RVAAVDWVFNGWGARD-- 110
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ W D + R + + S+V EGG I VDGEGT L TE L+ +RNP L
Sbjct: 111 -WARWDNDAHIGRFVGQLAGVEIVSSSLVNEGGGIQVDGEGTVLVTETVQLDPSRNPGLD 169
Query: 194 KGQIENELKAYLGVMKIIWLPRGL------FGM-------------------IHDGEAKP 228
K +E EL +G +IWLPRGL FG + + A P
Sbjct: 170 KRAVEAELARTIGARHVIWLPRGLTRDAERFGTRGHVDILVAIPSPGRLLVHVQNDPAHP 229
Query: 229 RLAGTR-----LAAS-----------------------------YVNFYIANGGIITPQF 254
A T+ LA S Y+N + N G+I +F
Sbjct: 230 DHAITKEIVDLLAQSRDAKGKAWEITHIPAPAVLRDSESWVDYSYINHLVVNDGVIACRF 289
Query: 255 GDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
D D A +L++ +P VV ++ AREI GG IHCITQQQPA
Sbjct: 290 DDSA-DDAATAILAEEYPGRRVVTVD-AREIFARGGGIHCITQQQPA 334
>gi|456388659|gb|EMF54099.1| hypothetical protein SBD_3767 [Streptomyces bottropensis ATCC
25435]
Length = 348
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 117/214 (54%), Gaps = 13/214 (6%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TPA G+ MP EW PH + WM WP ++ D A ++R +A VA A+ +FEPVTV
Sbjct: 3 TPAADGFRMPPEWAPHERTWMAWPGPNPTFEDPADLA-DSRRAWAAVARAVRRFEPVTVV 61
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
Q E AR+ L + + +E +++ +W RD GPT V + ++A +DW FN
Sbjct: 62 CGPGQSEEARTLLGDGVDTVERALDDAWMRDIGPTFVTDGR---------QLAAVDWTFN 112
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
WG + W D +A ++ + +V EGG+IHVDGEGT L TE L
Sbjct: 113 GWGAQP---WARWGHDAGIAGQVADLAGARTYASKLVNEGGAIHVDGEGTVLLTETVQLG 169
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
RNP T+ ++E E+ A+LG + IWLPRGL G
Sbjct: 170 PERNPGWTREEVEAEIHAHLGTRRAIWLPRGLTG 203
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ NGG++ F D + D A + + FP+ V ++ AR + GGG IHC+TQ
Sbjct: 283 SYINHYLCNGGVVLCGFDDPR-DERAAEIFRRLFPRRTVTLVD-ARTVFAGGGGIHCVTQ 340
Query: 298 QQP 300
QQP
Sbjct: 341 QQP 343
>gi|403526000|ref|YP_006660887.1| aguA: putative agmatine deiminase [Arthrobacter sp. Rue61a]
gi|403228427|gb|AFR27849.1| aguA: putative agmatine deiminase [Arthrobacter sp. Rue61a]
Length = 336
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 105/204 (51%), Gaps = 11/204 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MP+E P + WM +P L + +A A+ +A VA AI FEPVT+ + E
Sbjct: 1 MPSETAPQDRVWMAFPTGGYTLGDTEQEAHAARSTWAAVANAILDFEPVTMVVAPDDVET 60
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
A L + VI +N +W RD GP+ V++ + ++ +DW FN WGG D
Sbjct: 61 AARYLDPRVEVITADLNDAWMRDIGPSFVLDSNK--------QLGAVDWIFNGWGGQD-- 110
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ W D +A + P +V EGG IHVDGEGT L TE L++ RNP LT
Sbjct: 111 -WAAWDKDSLIAEYVSGRANARHLPSGIVNEGGGIHVDGEGTVLVTETVQLDQGRNPGLT 169
Query: 194 KGQIENELKAYLGVMKIIWLPRGL 217
K IE EL +G ++WLPRGL
Sbjct: 170 KADIEQELARTIGATHVVWLPRGL 193
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N + NGG+I F D D +A+R+L+ A+P V+G++ ARE+ GG IHCITQ
Sbjct: 273 SYINHLVVNGGVIACTFNDPM-DEKALRILADAYPGRRVIGVD-ARELFARGGGIHCITQ 330
Query: 298 QQPA 301
QQP+
Sbjct: 331 QQPS 334
>gi|424922896|ref|ZP_18346257.1| Peptidylarginine deiminase [Pseudomonas fluorescens R124]
gi|404304056|gb|EJZ58018.1| Peptidylarginine deiminase [Pseudomonas fluorescens R124]
Length = 350
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 114/206 (55%), Gaps = 14/206 (6%)
Query: 10 HGYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEPVTVCASA 68
+ ++MPAEW H+ WM WP ++ WR Q FA+VA AI++FEPV +
Sbjct: 9 NAWMMPAEWVTHAATWMVWPHNQALWESGWRVTLPLVQEDFARVANAIARFEPVKMVVDP 68
Query: 69 AQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWG 128
+ +A++ NI +I +++N SW RD+GP+ V + +AG+ W FN+WG
Sbjct: 69 SALASAKALCGPNIELIPLAVNDSWCRDSGPSFVCHPQQG--------LAGVSWRFNAWG 120
Query: 129 GVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNR 188
G LD +AR+ L+ L F + EGG+IHVDGEGT +TTE LLN NR
Sbjct: 121 G-----KSAHELDESLARRALNHLGLECFGTPLSNEGGAIHVDGEGTLITTESVLLNPNR 175
Query: 189 NPHLTKGQIENELKAYLGVMKIIWLP 214
NP + K ++E LGV K IWLP
Sbjct: 176 NPGIGKVEMEEIFSRLLGVKKTIWLP 201
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
ASY NFYIANG II P +G + D A +VL+QAFP EVV + R + GGG +HC
Sbjct: 281 FCASYTNFYIANGAIIMPAYGIEA-DEAAAKVLAQAFPGREVVPV-RINHLAHGGGGVHC 338
Query: 295 ITQQQPAIPT 304
ITQQQPA P
Sbjct: 339 ITQQQPAWPV 348
>gi|420863951|ref|ZP_15327341.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0303]
gi|420868746|ref|ZP_15332128.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0726-RA]
gi|392068216|gb|EIT94063.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0726-RA]
gi|392070926|gb|EIT96772.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0303]
Length = 324
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 140/320 (43%), Gaps = 72/320 (22%)
Query: 40 DDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGP 99
+ A A+ +A VA AI FEPV++ A A L I V+E ++ +W RD GP
Sbjct: 15 ESAHEARTAWAAVAHAIIDFEPVSMIVDPADRAVAPKYLSREIDVVEAPLDDAWMRDIGP 74
Query: 100 TIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH 159
T V +VA +DW FN WG D + W D + R + +
Sbjct: 75 TFVRGTDG--------RVAAVDWVFNGWGARD---WARWDNDAHIGRFVGQLAGVEIVSS 123
Query: 160 SMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL-- 217
S+V EGG I VDGEGT L TE L+ +RNP L + +E EL +G +IWLPRGL
Sbjct: 124 SLVNEGGGIQVDGEGTVLVTETVQLDPSRNPGLDRHAVEVELARTIGARHVIWLPRGLTR 183
Query: 218 ----FGM-------------------IHDGEAKPRLAGTR-----LAAS----------- 238
FG + + A P A T+ LA S
Sbjct: 184 DAERFGTRGHVDILVAIPSPGRLLVHVQNDPAHPDHAITKEIVDLLAQSHDANGKVWEIT 243
Query: 239 ------------------YVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
Y+N + N G+I +FGD D A +L++ +P VV ++
Sbjct: 244 PIPAPAVLRDSESWVDYSYINHLVVNDGVIACRFGDSA-DDAATAILAEEYPGRRVVTVD 302
Query: 281 RAREIVLGGGNIHCITQQQP 300
AREI GG IHCITQQQP
Sbjct: 303 -AREIFARGGGIHCITQQQP 321
>gi|119357697|ref|YP_912341.1| peptidyl-arginine deiminase [Chlorobium phaeobacteroides DSM 266]
gi|119355046|gb|ABL65917.1| agmatine deiminase [Chlorobium phaeobacteroides DSM 266]
Length = 352
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 161/363 (44%), Gaps = 91/363 (25%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTV------- 64
Y MP EW H W+ WP + E +W VF ++A+ +S E V +
Sbjct: 6 YRMPPEWACHKATWLSWPHKRE---SWPGKFEPVPAVFVEIASWLSSSEEVHINVLDEAM 62
Query: 65 ------CASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVA 118
A++++ R + + + + N +W RD GP V + G +
Sbjct: 63 EVEVRELFRKAEYDHLRR---DRLVLHRIPTNDAWCRDHGPNYVFRQ-----GGTGLEKV 114
Query: 119 GIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLT 178
++W FN+WGG + C D ++ +++A + + LP MVLEGG+I V+G G LT
Sbjct: 115 ILNWQFNAWGGKYEPCDDDNAVPVRIAEQ----QHLPLVSIDMVLEGGAIDVNGNGLLLT 170
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEA------------ 226
TE CLLN+NRNP +++ +IE L YLG+ K++WL G+ G DG
Sbjct: 171 TEACLLNRNRNPGMSRLEIEGALGRYLGIEKVLWLGDGIAGDDTDGHVDDMARFVNESTV 230
Query: 227 -------------KPRLAGTRLAAS------------------------------YVNFY 243
+P RL S Y NFY
Sbjct: 231 VIAVEDDAADENYEPLQDNYRLLKSFTDLRGEPLNVVKLPMPDPVYYDGERLPASYANFY 290
Query: 244 IANGGIITPQF---GDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
IAN ++ P + DKK A+ VL + FP +VVGI+ +++ G G IHCIT ++P
Sbjct: 291 IANSVVLVPLYRCDADKK----ALAVLQECFPGRKVVGID-CSDLIWGLGAIHCITHEEP 345
Query: 301 AIP 303
+P
Sbjct: 346 DLP 348
>gi|103486519|ref|YP_616080.1| peptidyl-arginine deiminase [Sphingopyxis alaskensis RB2256]
gi|98976596|gb|ABF52747.1| Porphyromonas-type peptidyl-arginine deiminase [Sphingopyxis
alaskensis RB2256]
Length = 327
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 148/340 (43%), Gaps = 71/340 (20%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV-TVCASAAQWE 72
MPAEW PH W+G+P E D+ FA + E V V Q +
Sbjct: 5 MPAEWAPHRAVWIGFPHLAEEWAGAIDEGRRDVAAFANAVHDGGRGEEVRLVVNDERQAD 64
Query: 73 NARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDD 132
A + + ++++ + W RDTGP +V + A+ A+ ++ FN WG
Sbjct: 65 IAAALIDPGVKILVQPLGDIWLRDTGPIVV--GTGAARRAR-------NFRFNWWG---- 111
Query: 133 GCYRDWSL--DLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
+ + DL+V + LP VLEGG+I VDG G C+TTEECLLN NRNP
Sbjct: 112 ---EKFVMPGDLEVGAALAGQSGLPVDDQDWVLEGGAIDVDGTGLCVTTEECLLNINRNP 168
Query: 191 HLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG-------------------------- 224
LT+ I L LG+ +++WL GL G DG
Sbjct: 169 SLTREDIAVRLHQSLGIERLLWLGHGLIGDHTDGHVDNLARFVGEGRLALPVAAGDDDPN 228
Query: 225 -----EAKPR-------------------LAGTRLAASYVNFYIANGGIITPQFGDKKWD 260
+A+ R L G AASY+NFYI N ++ P +G D
Sbjct: 229 AAVYADARARTVAFGGVEIVDLPSPGRIELNGEIAAASYMNFYIGNSTVVVPTYGVAN-D 287
Query: 261 GEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
AV L+ FP VG+ AR I++GGG+ HC +QQ P
Sbjct: 288 QAAVDTLAALFPDRRAVGVP-ARGIIVGGGSFHCSSQQLP 326
>gi|398383920|ref|ZP_10541979.1| peptidylarginine deiminase-like enzyme [Sphingobium sp. AP49]
gi|397723857|gb|EJK84341.1| peptidylarginine deiminase-like enzyme [Sphingobium sp. AP49]
Length = 334
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 149/341 (43%), Gaps = 60/341 (17%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV-TVCASAAQ 70
+ MPAEW PH W+G+P + D A FA A K E V V A+ A
Sbjct: 3 FRMPAEWAPHDWTWIGFPTNPDEWPGAFDGARRQITDFASALHADGKGEDVRLVVANEAD 62
Query: 71 WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
+ AR+ + + + + W RDT P V+N +GA A +D+ FN WGG
Sbjct: 63 ADAARALVAPGVTIAVHRLGDVWLRDTAPIAVLN---GVTGAGEHGRALVDFGFNGWGG- 118
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
D + ++ +T + + V EGG+I DG G +TTE+CLLN NRNP
Sbjct: 119 ----KYQMPGDEDIGARLAATTGMATSTQNWVFEGGAIDTDGTGLFVTTEQCLLNPNRNP 174
Query: 191 HLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG-------------------------- 224
L +G+IE L LG+ ++WL GL DG
Sbjct: 175 DLDRGKIETLLAGALGLSDMLWLGDGLLNDHTDGHVDNLARFVAPGKLALPIATTPDDPN 234
Query: 225 -----EAKPR------------------LAGTRLAASYVNFYIANGGIITPQFGDKKWDG 261
+A+ R + G + ASY+NFY+ N +I P +G D
Sbjct: 235 SAIYADARARAKAHGVEVVDIPSPGLVLVDGEAIPASYMNFYVGNAAVIVPIYGQPN-DQ 293
Query: 262 EAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
A+ + F +++G+ R+ I+ GGG+ HC +QQ P++
Sbjct: 294 AALDAFAPFFLGRQIIGL-RSDAILSGGGSFHCCSQQMPSL 333
>gi|309791876|ref|ZP_07686359.1| agmatine deiminase [Oscillochloris trichoides DG-6]
gi|308226048|gb|EFO79793.1| agmatine deiminase [Oscillochloris trichoides DG6]
Length = 342
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 120/226 (53%), Gaps = 21/226 (9%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP GY MPAEWEPH W+ WP + +W V+A++ A++ E V +
Sbjct: 3 TPTHLGYHMPAEWEPHQATWLSWP---HKEASWPGKIEQIHPVYAQMVAALATSETVHIN 59
Query: 66 AS-AAQWENARSQLPE-----NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
+ AA E R L E +IR+ N +W RD G I V ++ ++A
Sbjct: 60 VNDAAMAERVRGYLAEAGAQGDIRLHLFPTNDAWCRDHG-AIFVRRADG-------QLAA 111
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTT 179
DW +N+WG Y ++LD Q+ + +PRF M+LEGGSI V+G G LT+
Sbjct: 112 TDWGYNAWGDK----YPPYNLDNQIPAHMADYLGVPRFEGGMILEGGSIEVNGAGLLLTS 167
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGE 225
E+CLLN NRNP L++ QIE L+ +LGV KI+WL G+ G DG
Sbjct: 168 EQCLLNPNRNPDLSQDQIEARLRDFLGVQKILWLGEGIVGDDTDGH 213
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RL ASY NFYIAN ++ P F + D A ++ FP VVGI+ +I+ G G H
Sbjct: 277 RLPASYANFYIANRVVLVP-FYNHPNDARAAAIIQACFPDRRVVGID-CTDIIWGLGAWH 334
Query: 294 CITQQQP 300
C+TQQ P
Sbjct: 335 CLTQQVP 341
>gi|193214768|ref|YP_001995967.1| Agmatine deiminase [Chloroherpeton thalassium ATCC 35110]
gi|193088245|gb|ACF13520.1| Agmatine deiminase [Chloroherpeton thalassium ATCC 35110]
Length = 356
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 156/362 (43%), Gaps = 78/362 (21%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MP EW H W+ WP LD+W VF ++ +S E V +
Sbjct: 2 TPKELGFFMPPEWAKHDGTWLSWP---HNLDSWPGKFEPVPDVFIELIRFLSPHEEVHIN 58
Query: 66 ASAAQWE-NARSQLPE---------NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAP 115
+ A+ E + R ++ E NI N +W RD GP V+ K +A
Sbjct: 59 VAGAEMEQDIRRRVQEGGIVRDAVANIFYHHFPTNDAWCRDHGPNFVLRKMPNGQVERA- 117
Query: 116 KVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGT 175
IDW +N+WGG Y + LD ++ ++ + RF M+LEGGSI +G+GT
Sbjct: 118 ---IIDWGYNAWGG----KYPPFDLDDKIPAQVAELMGVQRFVPGMILEGGSIDTNGKGT 170
Query: 176 CLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG------------------- 216
LTT CLLN NRNP L++ +IE+ LK YLG+ KI+WL G
Sbjct: 171 LLTTTSCLLNPNRNPELSQAEIEHNLKEYLGMTKILWLEDGIVGDDTDGHIDDISRFVNP 230
Query: 217 ------------------------LFGMIHDGEAKP------------RLAGTRLAASYV 240
L D + P RL ASY
Sbjct: 231 TTIVTAVEENPDDENYEPLQKNLELLKTFTDQDGNPFNIVEIPMPPKIEFEDERLPASYA 290
Query: 241 NFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
NFYIAN ++ P + D + V +L FP V ++ ++VLG G IHC+T + P
Sbjct: 291 NFYIANNVVLVPTYRHAN-DYKVVEILQPLFPDRRVQAVD-CTDLVLGLGAIHCVTHESP 348
Query: 301 AI 302
++
Sbjct: 349 SL 350
>gi|271967446|ref|YP_003341642.1| agmatine deiminase [Streptosporangium roseum DSM 43021]
gi|270510621|gb|ACZ88899.1| Agmatine deiminase [Streptosporangium roseum DSM 43021]
Length = 331
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 107/206 (51%), Gaps = 18/206 (8%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+ MP EW PH++ WM WPV L D + R ++ VA I ++EPVT+
Sbjct: 2 FFMPPEWHPHTRTWMSWPVAGYALS----DPEASYRAWSSVANTIVRYEPVTMVVDPGGR 57
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
E A L + V+E ++ W RD GPT +++ +AG+DW FN WG
Sbjct: 58 EPAARWLSPEVEVMEQPLDDCWMRDNGPTFLLDGRGG--------LAGVDWTFNGWG--- 106
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ + D VA +L RF MV EGG IHVDGEGT + TE L RNP
Sbjct: 107 ---WHAHAKDDLVAGAVLERAGAVRFRSEMVNEGGGIHVDGEGTVIVTETVQLGDRRNPG 163
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGL 217
T+ ++E EL A +GV K+IWLPRGL
Sbjct: 164 WTRERVEAELGARIGVEKVIWLPRGL 189
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 232 GTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGN 291
G + SYVN Y+ANG + F D + D A V + FP+ V ++ AR I GG
Sbjct: 263 GELVDYSYVNHYLANGLALLCSFDDPR-DAAAADVFVKLFPERAVEMVD-ARAIFALGGG 320
Query: 292 IHCITQQQP 300
IHCITQQQP
Sbjct: 321 IHCITQQQP 329
>gi|398977234|ref|ZP_10686991.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM25]
gi|398138476|gb|EJM27497.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM25]
Length = 350
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 114/204 (55%), Gaps = 14/204 (6%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEPVTVCASAAQ 70
++MPAEW H+ WM WP ++ W Q FA+VA AI++FEPV + +
Sbjct: 11 WMMPAEWVTHAATWMVWPHNQALWESGWGVTLPLVQEDFARVANAIARFEPVKMVVDPSA 70
Query: 71 WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
A++ NI +I +++N SW RD+GP+ VV+ +AG+ W FN+WGG
Sbjct: 71 IARAKALCGPNIELIPLAVNDSWCRDSGPSFVVHPEQG--------LAGVSWRFNAWGG- 121
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
LD +AR++L+ F ++ EGG+IHVDGEGT +TTE LLN NRNP
Sbjct: 122 ----KSAHDLDESLARRVLNHLGGECFGTALSNEGGAIHVDGEGTLITTESVLLNPNRNP 177
Query: 191 HLTKGQIENELKAYLGVMKIIWLP 214
++K ++E LGV K IWLP
Sbjct: 178 GVSKAEMEEIFSRLLGVKKTIWLP 201
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
ASY NFYIANG II P +G + D A L++AFP EVV ++ + GGG +HC
Sbjct: 281 FCASYTNFYIANGAIIMPAYGIEA-DHVAAETLAKAFPGREVVPVQ-INHLAHGGGGVHC 338
Query: 295 ITQQQPAIPT 304
ITQQQPA P
Sbjct: 339 ITQQQPAWPV 348
>gi|444379781|ref|ZP_21178955.1| Agmatine deiminase [Enterovibrio sp. AK16]
gi|443676163|gb|ELT82870.1| Agmatine deiminase [Enterovibrio sp. AK16]
Length = 325
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 155/348 (44%), Gaps = 83/348 (23%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHA-QRVFAKVATAISKFEPVTVCASAAQWE 72
MP E PH + WM + + W + L A Q+ A +A I+K+EPV++ E
Sbjct: 1 MPDEAAPHERTWMAFGASAQI---WGERLLPAVQKNLADIALTIAKYEPVSMLVRKEDIE 57
Query: 73 NARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDD 132
AR+ + +N+ +IE ++ W RDT P V+N+ Q K A +D+NFN WG
Sbjct: 58 IARALMGDNVDLIEGQLDDLWARDTAPLFVLNE-------QGDK-AAVDFNFNGWGN--- 106
Query: 133 GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
+ LD VA++I R +V+EGG I VDG+GT + E C LN NRNP +
Sbjct: 107 --KQQHRLDAAVAKQIARLSHTQRIQAGIVMEGGCIEVDGQGTAIIAESCTLNANRNPDI 164
Query: 193 TKGQIENELKAYLGVMKIIWLPRGLFGM-IHDGE-------------------------- 225
+K Q E+ L LG+ KIIW+P G+ G I DG
Sbjct: 165 SKVQFEDLLIPLLGLDKIIWIP-GIRGRDITDGHTDFYARFTSPGNVVVGIDTYPESYEY 223
Query: 226 -----------AKPRLAGTRLA--------------------ASYVNFYIANGGIITPQF 254
A G RL+ A YV FY+ N +I +F
Sbjct: 224 ELTREHWEILSAATDAQGNRLSLHALETPDTIREEFDSKEFAAGYVGFYVCNHAVIMQEF 283
Query: 255 GDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
GDK D +A + + FP ER E + G+IHC TQQ+P I
Sbjct: 284 GDKAADAKAKATMERLFP-------ERTVEALNVDGSIHCATQQEPQI 324
>gi|406877625|gb|EKD26791.1| hypothetical protein ACD_79C01014G0009 [uncultured bacterium]
Length = 340
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 116/221 (52%), Gaps = 19/221 (8%)
Query: 10 HGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
+ + MPAEWE H + WP ++ W + + Q ++ IS+FE V V A
Sbjct: 4 NDWYMPAEWEEHKGTILVWP---SNIETWGETINNVQSSIIELMKVISEFEKVFVTVKDA 60
Query: 70 QWE-----NARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
Q + +S+ +N+ V+E++ N SW RD GP V+N+ S K A +W +
Sbjct: 61 QTKYLLNNTIKSERIKNVSVLEITNNDSWVRDFGPNFVLNRKDKS------KPAINNWRY 114
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPR-FPHSMVLEGGSIHVDGEGTCLTTEECL 183
N+WGG Y W DL K F M+LEGGSI V+GEG LTT+ CL
Sbjct: 115 NAWGG----KYPPWEDDLIYTNKFAEISGYKDIFDIDMILEGGSIDVNGEGIVLTTKSCL 170
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LNKNRNP +T +IE LK YLGV +IIW+ G+ G DG
Sbjct: 171 LNKNRNPEMTMSEIEANLKKYLGVNEIIWIDEGIAGDDTDG 211
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
R+ ASY NFY NGG++ P F D K D E + + P +VVG+ + V+G G IH
Sbjct: 276 RIPASYANFYFVNGGLVVPVFDDTK-DLEVLDFIQSLRPDLKVVGV-NGIDFVVGLGGIH 333
Query: 294 CITQQ 298
C+TQQ
Sbjct: 334 CLTQQ 338
>gi|21223882|ref|NP_629661.1| hypothetical protein SCO5527 [Streptomyces coelicolor A3(2)]
gi|289768912|ref|ZP_06528290.1| agmatine deiminase [Streptomyces lividans TK24]
gi|73622175|sp|O86509.1|AGUA_STRCO RecName: Full=Putative agmatine deiminase; AltName: Full=Agmatine
iminohydrolase
gi|3355675|emb|CAA19975.1| conserved hypothetical protein SC1C2.08 [Streptomyces coelicolor
A3(2)]
gi|289699111|gb|EFD66540.1| agmatine deiminase [Streptomyces lividans TK24]
Length = 339
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 107/208 (51%), Gaps = 12/208 (5%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+ MP EW PH + WM WP + ++ A+ +A VA A+ +FEPVT+ Q
Sbjct: 3 FRMPPEWAPHERTWMAWPGPNATFTD-AEELAGARAAWASVARAVRRFEPVTMVHGPGQA 61
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
AR L ++ ++E ++ +W RD GPT V + +A +DW FN WG D
Sbjct: 62 ATARELLGPDVDLVERELDDAWMRDIGPTFVTDGRGG--------LAAVDWVFNGWGAQD 113
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ W D ++AR + P +V EGG+IHVDGEGT L T+ L RNP
Sbjct: 114 ---WARWEHDAEIARHVADLAAAPVLSSPLVNEGGAIHVDGEGTVLLTDTVQLGSGRNPG 170
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGLFG 219
++ ++E E+ A LG IWLP GL G
Sbjct: 171 WSREEVEAEIHAKLGTTTAIWLPHGLAG 198
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ NGG++ FGD D A + + FP+ V ++ AR I GGG IHCITQ
Sbjct: 277 SYINHYVCNGGVVLCAFGDPN-DELAAGIFRRLFPERTVTLVD-ARTIFAGGGGIHCITQ 334
Query: 298 QQP 300
QQP
Sbjct: 335 QQP 337
>gi|386814812|ref|ZP_10102030.1| agmatine deiminase [Thiothrix nivea DSM 5205]
gi|386419388|gb|EIJ33223.1| agmatine deiminase [Thiothrix nivea DSM 5205]
Length = 347
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 159/350 (45%), Gaps = 81/350 (23%)
Query: 16 AEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTV-CASAAQWENA 74
AEW P + WP +W D+ A+ +A++ +AIS E V + C AA +
Sbjct: 8 AEWHPQWGVLLAWP---HPDTDWADNLQEAETCYAQIVSAISHREHVLLLCHDAAHQAHI 64
Query: 75 RSQLPE-------NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSW 127
+ L + N+ ++M N +W RD G V+ Q K +D+ FN+W
Sbjct: 65 EAVLSQETAWNQGNVHCVQMPYNDTWARDFGFITVM---------QDGKPMLLDFTFNAW 115
Query: 128 GGVDDGCYRDWSLDLQV-ARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNK 186
GG D D +++ Q+ +L+ L H +V+EGGS+ DG+GT LTTE CLLN
Sbjct: 116 GGKFDAAL-DNAVNAQLTVLPLLAGNMLET--HPLVMEGGSLETDGQGTLLTTEICLLNP 172
Query: 187 NRNPHLTKGQIENELKAYLGVMKIIWL----------------------PRGLFGMIHDG 224
NRNP L + IE +L+A LGV +I+WL P+ + MI
Sbjct: 173 NRNPALGRTDIETQLRAALGVERILWLANGHLEGDDTDAHIDTLARFADPQSIIYMICTD 232
Query: 225 EAKPRLA---------------------------------GTR-LAASYVNFYIANGGII 250
A A G R L ASYVNF I NG ++
Sbjct: 233 PADSHYAPLQAMETELKALRQPNGEAYRLFPIPMPAAIYDGDRRLPASYVNFLIINGAVL 292
Query: 251 TPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
P + D+ +D A+ + AFP ++++ I+ R ++ G++HC+T Q P
Sbjct: 293 LPVYADECFDPVAIEQMQAAFPAHDIIPID-CRALIAQNGSLHCVTMQIP 341
>gi|119960966|ref|YP_946764.1| peptidylarginine deiminase [Arthrobacter aurescens TC1]
gi|119947825|gb|ABM06736.1| putative peptidylarginine deiminase [Arthrobacter aurescens TC1]
Length = 341
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 107/209 (51%), Gaps = 11/209 (5%)
Query: 9 LHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASA 68
+ + MP+E P + WM +P L + ++A A+ +A VA A FEPVT+ +
Sbjct: 1 MSAWRMPSETAPQDRVWMAFPTGGYTLGDTEEEAHAARSTWAAVANATLDFEPVTMVVAP 60
Query: 69 AQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWG 128
E A L + VI +N +W RD GP+ V++ + ++ +DW FN WG
Sbjct: 61 DDVETAARYLDPRVEVITADLNDAWMRDIGPSFVLDSNK--------QLGAVDWIFNGWG 112
Query: 129 GVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNR 188
G D + W D +A + P +V EGG IHVDGEGT L TE L++ R
Sbjct: 113 GQD---WAAWDKDSLIAEYVSGRANARHLPSGIVNEGGGIHVDGEGTVLVTETVQLDQGR 169
Query: 189 NPHLTKGQIENELKAYLGVMKIIWLPRGL 217
NP LTK IE EL +G ++WLPRGL
Sbjct: 170 NPGLTKADIEQELARTIGATHVVWLPRGL 198
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N + NGG+I F D D +A+R+L+ A+P V+G++ ARE+ GG IHCITQ
Sbjct: 278 SYINHLVVNGGVIACTFNDPM-DEKALRILADAYPGRRVIGVD-ARELFARGGGIHCITQ 335
Query: 298 QQPA 301
QQP+
Sbjct: 336 QQPS 339
>gi|428222927|ref|YP_007107097.1| peptidylarginine deiminase-like protein [Synechococcus sp. PCC
7502]
gi|427996267|gb|AFY74962.1| peptidylarginine deiminase-like enzyme [Synechococcus sp. PCC 7502]
Length = 351
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 155/356 (43%), Gaps = 71/356 (19%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQ 70
GY+ PAEW+PHS CW+ +P W ++ AQ F +A I E + + + +
Sbjct: 3 GYIQPAEWQPHSACWLAFPSDRSL---WLENLEAAQAEFVDLAKVIGYSEQLELLVANLE 59
Query: 71 WENARSQLP--ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQ------APKVAGIDW 122
E QL + R + W RD P I +NK S + ++ + +
Sbjct: 60 TEAIARQLLVGTSARFHSIPYGDIWMRDIAP-IFLNKKSTKEITKDLIEETKKELGTVTF 118
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
++N WG D + + ++ + T+ +P VLEGG++ VDG GTCLTT++C
Sbjct: 119 SWNGWGH-KYLLEHDDQVAIAISEFLAKTQNIPTVRFPWVLEGGAVEVDGLGTCLTTKQC 177
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGE---------------AK 227
LLN NRNPHLT+ +IE L LGV KI+WL GL DG K
Sbjct: 178 LLNPNRNPHLTQTEIEQGLSEALGVSKILWLEAGLLNDHTDGHIDTIARFIAPHTVICMK 237
Query: 228 PR-------LAGTRLAASYVNFYIANGG-------------------------------- 248
P ++AA F A G
Sbjct: 238 PESKDDPNYTVLNQIAAQLKGFTDATGKNLEVIEIPSTGLVLDPDGEVMPASYLNFYIAN 297
Query: 249 --IITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
+I P +G ++D AV ++Q FP + +G+ A+ I+ GGG HCITQQQP I
Sbjct: 298 GHVIVPTYG-SEFDQLAVGAIAQHFPTRQTLGL-SAKIILSGGGAFHCITQQQPLI 351
>gi|392964926|ref|ZP_10330346.1| Agmatine deiminase [Fibrisoma limi BUZ 3]
gi|387846309|emb|CCH52392.1| Agmatine deiminase [Fibrisoma limi BUZ 3]
Length = 358
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 152/357 (42%), Gaps = 75/357 (21%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRV-FAKV-----ATAISKFE 60
PA G+ PAEW PH W+ WP R + + + F K I+
Sbjct: 16 PAQEGFFFPAEWHPHVATWLSWPHTEASWSKERQELMFPAYIDFIKAIAESEQVCINAHN 75
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
+ + A+ + A + L I ++ N SW RD GP ++N +
Sbjct: 76 DIVIQAAKLRLLVADADL-SKITLLPHPTNDSWCRDHGPAFLINPERKQRMI-------V 127
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
+W +N+WG Y + D + +I L +++EGGS+ +G GT LT+
Sbjct: 128 NWGYNAWGNK----YPPYDRDDLIPVEIAHYCDLDYVTPGIIMEGGSVEFNGAGTVLTSR 183
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG---------------- 224
CLLN+NRN HL++ IE L Y GV +++W+ G+ G DG
Sbjct: 184 ACLLNQNRNAHLSQADIERYLCDYYGVQQVLWVEEGIVGDDTDGHIDDTVRFVNEDTVIA 243
Query: 225 --EAKPR-------------------LAGTRL------------------AASYVNFYIA 245
E P L G +L ASY NF I
Sbjct: 244 AYEPNPNDDNYPFLQEIHHELKTMRLLNGKQLNIVELPMPDPVVSDGIRLPASYANFLIT 303
Query: 246 NGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
NG +I P F K D +A+ ++ Q FP +VVGI+ + EIV G G+ HC++QQ+PA+
Sbjct: 304 NGSVIVPTFRCDK-DQQALDIIGQCFPTRKVVGID-STEIVWGLGSFHCLSQQEPAV 358
>gi|126179981|ref|YP_001047946.1| peptidyl-arginine deiminase [Methanoculleus marisnigri JR1]
gi|125862775|gb|ABN57964.1| agmatine deiminase [Methanoculleus marisnigri JR1]
Length = 639
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 118/226 (52%), Gaps = 22/226 (9%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TPA+ GY MPAEWEPH W+ WP E D + ++ ++ A+ E V +
Sbjct: 290 TPAVSGYRMPAEWEPHDAVWLSWPHDRETFP----DLAAVEGIYVEIIAALRGSETVNLL 345
Query: 66 ASAAQWE-NARSQLPEN------IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVA 118
+ + ++ L E IR WFRD GPT +V++ +A +A
Sbjct: 346 VTDEKMHIRVKAMLEEEGVDTAGIRFHLADYADVWFRDYGPTFLVDR-------KAGNLA 398
Query: 119 GIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLT 178
++W FN+WG D + L + R++ +P F VLEGGS+ V+G GT +T
Sbjct: 399 MVNWTFNAWGEKYTELMEDTRIPLAMNREM----EIPIFTPGFVLEGGSVEVNGCGTVIT 454
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
TE CLLN NRNPHL++ +IE L+AYLG +IWL +G+ G DG
Sbjct: 455 TEACLLNPNRNPHLSREEIEAYLEAYLGAGHVIWLKQGIAGDDTDG 500
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RL ASY NFYI N ++ P F DG A+ + QAFP EVVGI+ +V G G IH
Sbjct: 564 RLPASYANFYIGNTVVLVPVFKHPN-DGIAMARIQQAFPDREVVGID-CTAMVAGFGAIH 621
Query: 294 CITQQQPAIPTNAAK 308
CI+QQQP+ + A+
Sbjct: 622 CISQQQPSSGESGAR 636
>gi|397677546|ref|YP_006519084.1| Agmatine deiminase [Zymomonas mobilis subsp. mobilis ATCC 29191]
gi|395398235|gb|AFN57562.1| Agmatine deiminase [Zymomonas mobilis subsp. mobilis ATCC 29191]
Length = 326
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 145/343 (42%), Gaps = 72/343 (20%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQR---VFAKVATAISKFEPVTVCASA 68
Y PAEW PH W+G+P W +D AQ FAK +A + E V + A+
Sbjct: 3 YHQPAEWMPHDAVWIGFPSDASL---WLEDLEPAQAEVVAFAKAVSAKGEGEKVYLVAAH 59
Query: 69 AQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSW 127
+ + ++ +I VI W RD P V + K A + FN W
Sbjct: 60 KEAADQAVKMAGSDIEVICHPFGDIWLRDNAPLFV---------KEGDKKALALFRFNGW 110
Query: 128 GGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
GG + D + R + LP VLEGGSI DG G +TTEECLLN N
Sbjct: 111 GG-----KYNLDGDQTIGRDLAKDTALPVLEKDWVLEGGSIDGDGHGLVVTTEECLLNPN 165
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAK--PRLAG------------- 232
RNP L++G I L+ LG +++WL +GL DG R G
Sbjct: 166 RNPELSRGDIARHLRNDLGYDRVLWLRKGLHNDHTDGHVDNLARFIGENHLVVPIATDQD 225
Query: 233 ---------------------TRL-------------AASYVNFYIANGGIITPQFGDKK 258
TRL ASY+NFYI N ++ P +G K
Sbjct: 226 DPNREVYDQAAQIATDFGVKVTRLPSTGRITIDDEVVPASYMNFYIGNKVVVVPVYGAKN 285
Query: 259 WDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
DG V+ L FP +VV + A I+ GGG+ HCI+QQ PA
Sbjct: 286 -DGAIVQALEALFPSRKVVALP-AGHILTGGGSFHCISQQWPA 326
>gi|423691193|ref|ZP_17665713.1| putative agmatine deiminase [Pseudomonas fluorescens SS101]
gi|388000124|gb|EIK61453.1| putative agmatine deiminase [Pseudomonas fluorescens SS101]
Length = 350
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 118/215 (54%), Gaps = 15/215 (6%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKF 59
M+M+ L G+ MPAEW H+ WM WP +N W Q+ FA+VATAI++F
Sbjct: 1 MQMDEVENL-GWRMPAEWCRHAATWMVWPHNQALWENTWGVTLAQVQQDFARVATAIARF 59
Query: 60 EPVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
EPV + + +A + I +I ++N SW RD+GP+ + + +AG
Sbjct: 60 EPVKMVVDPSAVASAIALCGPRIELIPQAVNDSWCRDSGPSFICHPQQG--------LAG 111
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTT 179
+ W FN+WG +W D +AR++L+ L F + EGG++HVDGEGT +TT
Sbjct: 112 VSWRFNAWGA---KSAHEW--DESLARRVLNHLGLVCFGMPLSNEGGALHVDGEGTLITT 166
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLP 214
E LLN NRNP +TK IE +LG+ K IWLP
Sbjct: 167 ESVLLNPNRNPGVTKADIEEVFARWLGIKKTIWLP 201
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 69/156 (44%), Gaps = 2/156 (1%)
Query: 148 ILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGV 207
I T LP P+ + + HVDG L++ + Q+ E + L +
Sbjct: 194 IKKTIWLPGDPNYVTGDMTDGHVDGICAFARPGVLLVDATHDHSSVYAQVARENRRVLEL 253
Query: 208 MKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVL 267
R +++ ASY NFYIANG II P +G D A VL
Sbjct: 254 ATDAQGRRFELIELYEATEAVNTDAEVFCASYTNFYIANGAIIMPAYGIAA-DQVAANVL 312
Query: 268 SQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIP 303
QAFP E+V + R + GGG +HCITQQQPA P
Sbjct: 313 GQAFPDREIVPV-RINHLAHGGGGVHCITQQQPAWP 347
>gi|399000758|ref|ZP_10703480.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM18]
gi|398129108|gb|EJM18482.1| peptidylarginine deiminase-like enzyme [Pseudomonas sp. GM18]
Length = 350
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 113/205 (55%), Gaps = 14/205 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
G+ MPAEW H+ WM WP ++ W Q FA+VA AI++FEPV + +
Sbjct: 10 GWWMPAEWARHAATWMVWPHNKALWESGWGVTLALVQEDFARVANAIARFEPVKMVVDPS 69
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+A++ NI +IE ++N SW RD+GP+ V + + G+ W FN+WGG
Sbjct: 70 AVASAQALCGPNIELIESAVNDSWCRDSGPSFVCHPQQG--------LGGVSWRFNAWGG 121
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
LD +AR+ L+ + F + EGG+IHVDGEGT +TTE LLN NRN
Sbjct: 122 KSAH-----DLDESLARRTLNHLGVQCFGTPLSNEGGAIHVDGEGTLITTESVLLNANRN 176
Query: 190 PHLTKGQIENELKAYLGVMKIIWLP 214
P ++K ++E+ LGV K IWLP
Sbjct: 177 PGMSKAEMEDIFTRLLGVKKTIWLP 201
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
ASY NFYIAN II P +G D A +VL+Q FP+ EVV + R + GGG +HC
Sbjct: 281 FCASYTNFYIANNAIIMPAYGIDA-DHAAAKVLAQVFPEREVVPV-RINHLAHGGGGVHC 338
Query: 295 ITQQQPAIP 303
ITQQQPA P
Sbjct: 339 ITQQQPAWP 347
>gi|219120127|ref|XP_002180809.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407525|gb|EEC47461.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 386
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 121/229 (52%), Gaps = 21/229 (9%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWP--VRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M + +L MPAEWE H+ C + +P RL + L R A V E
Sbjct: 1 MKASQSLSRIRMPAEWERHAACLILFPHNAATFRLSLAQPQVLRVARTIATVGQ-----E 55
Query: 61 PVTVCASAAQWENARS----QLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPK 116
PV + A+ + E R +L ENIRV+ N +W RDT PT V +
Sbjct: 56 PVILFAND-EMETFRLRELLKLDENIRVLTCPSNDTWARDTAPTFVTLNDGDGQNNEL-L 113
Query: 117 VAGIDWNFNSWGGVDDGCYRDWSLDLQVA----RKI----LSTERLPRFPHSMVLEGGSI 168
+ G+DW+FN++GG ++GCY LD +VA R+I + E + P S+VLEGGSI
Sbjct: 114 LRGLDWDFNAYGGAEEGCYWPCCLDQKVAATMCRQISDVGILAEPIESLPISLVLEGGSI 173
Query: 169 HVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
H DGEGT LTT ECLLN NRNP +++ +IE + G K+IWL GL
Sbjct: 174 HTDGEGTILTTRECLLNNNRNPSMSRQEIEEIILCNTGCTKMIWLSDGL 222
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Query: 229 RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLG 288
R AG RLAASY+NFYIANG +I PQF D +D +A+ L + FP ++VVG+ ++EI++G
Sbjct: 313 RHAGERLAASYINFYIANGAVIVPQFDDDVYDSKAIETLEELFPAHKVVGVS-SKEILIG 371
Query: 289 GGNIHCITQQQPAI 302
GGNIHCITQQ P++
Sbjct: 372 GGNIHCITQQVPSL 385
>gi|220907991|ref|YP_002483302.1| Agmatine deiminase [Cyanothece sp. PCC 7425]
gi|219864602|gb|ACL44941.1| Agmatine deiminase [Cyanothece sp. PCC 7425]
Length = 358
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 119/237 (50%), Gaps = 31/237 (13%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M M +PA GY PAEW+ H CW+ +P E W+++ AQ F ++ AI+ +
Sbjct: 9 MTMTSSPADRGYFQPAEWQSHRACWLAFPSHAEL---WQENLAAAQAEFVQLCRAIADVD 65
Query: 61 PVTVCASAAQWE---------NARSQLPENI--RVIEMSMNGSWFRDTGPTIVVNKSSAS 109
P T Q E SQL E + R + W RDTGP + S+A
Sbjct: 66 PSTGTPRGEQLEILVLDQTGKELASQLLEEVPARFHLLPFGDIWLRDTGPIFLT--SAAG 123
Query: 110 SGAQAPKVAGIDWNFNSWGGVDDGCYRDWSL--DLQVARKILSTERLPRFPHSMVLEGGS 167
+GA + + FN WG + + L D QV +I + LP F ++ EGG+
Sbjct: 124 TGAT------VRFQFNGWG-------QKYELPGDEQVGEQIAKSTGLPDFTIPLIAEGGA 170
Query: 168 IHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
+ +DG GTCLTT +CLLN NRNP T+ ++E LKA LGV K++WL GL DG
Sbjct: 171 LEIDGAGTCLTTRQCLLNPNRNPGRTEFELETALKAALGVKKVLWLEEGLLNDHTDG 227
>gi|104783588|ref|YP_610086.1| peptidylarginine deiminase [Pseudomonas entomophila L48]
gi|95112575|emb|CAK17303.1| putative peptidylarginine deiminase, PPADH family [Pseudomonas
entomophila L48]
Length = 349
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 109/205 (53%), Gaps = 14/205 (6%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDN-WRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
G+ MPAEW H+ WM WP ++ W QR +A+VA I++FEPV + +
Sbjct: 8 GWRMPAEWARHAATWMIWPHNQALWESGWGVTLADVQRDYARVAATIARFEPVKMVVDPS 67
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
AR I +IE++++ SW RD+GPT + + VAG+ W FN+WGG
Sbjct: 68 AIAIARELCGPGIELIELAVDDSWCRDSGPTFLTHPQHG--------VAGLSWRFNAWGG 119
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
+ D +AR+IL + EGG+IHVDGEGT +TTE LLN NRN
Sbjct: 120 KSEH-----GKDRSLARRILDQLGFEGLSTPLCNEGGAIHVDGEGTLITTESVLLNPNRN 174
Query: 190 PHLTKGQIENELKAYLGVMKIIWLP 214
P L+K + E+ LG+ K IWLP
Sbjct: 175 PGLSKAEFEDCFARLLGIRKTIWLP 199
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
ASY NFY+ANG +I P +G D A + L+ AFP EVV + R I GGG IHC
Sbjct: 279 FCASYTNFYLANGAVIMPAYGIDA-DQAAAQQLALAFPGREVVPV-RIDHIAHGGGGIHC 336
Query: 295 ITQQQPA 301
ITQQQPA
Sbjct: 337 ITQQQPA 343
>gi|377566990|ref|ZP_09796236.1| hypothetical protein GOSPT_129_00490 [Gordonia sputi NBRC 100414]
gi|377525838|dbj|GAB41401.1| hypothetical protein GOSPT_129_00490 [Gordonia sputi NBRC 100414]
Length = 340
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 111/204 (54%), Gaps = 11/204 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAE PH + WM +P L DA A +++VA +++FE V + +
Sbjct: 1 MPAETAPHERVWMAFPRTNTTLAESAADAETAYAAWSEVANTVAQFEKVIMVVDPTETTR 60
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
AR+ L E I ++E ++ SW RD GPT V++ A ++ + W FN WG +
Sbjct: 61 ARALLSEEIEIVEAPLDDSWMRDIGPTFVIDD--------AGQLGAVTWTFNGWGAQE-- 110
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ +W+ D Q+ R + +P +V EGG+IHVDGEGT L TE L+ RNP+ T
Sbjct: 111 -WAEWTNDRQIGRVVAGRAGVPVVSSMLVQEGGAIHVDGEGTVLVTETVQLDPYRNPYAT 169
Query: 194 KGQIENELKAYLGVMKIIWLPRGL 217
+ IE EL+ +G K+IWLPRGL
Sbjct: 170 RETIEAELERTIGARKVIWLPRGL 193
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N + NGG++ +G+ + D A +L+ +P VV I+ AREI+ GG IHCITQ
Sbjct: 273 SYINHLVVNGGVVACGYGEPEADARAAEILASVYPGRRVVTID-AREILARGGGIHCITQ 331
Query: 298 QQPAI 302
QQPA+
Sbjct: 332 QQPAV 336
>gi|408529077|emb|CCK27251.1| Putative agmatine deiminase [Streptomyces davawensis JCM 4913]
Length = 338
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 111/208 (53%), Gaps = 13/208 (6%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
Y MP EW PH + WM WP ++ A+ +A VA A+ +FEPVT+ Q
Sbjct: 3 YRMPPEWAPHERTWMAWPGPNPTFTT-DEELAEARIAWAAVARAVRRFEPVTMVHGPGQG 61
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
E AR L ++ ++E ++ +W RD GPT V N ++A +DW FN WG D
Sbjct: 62 ERARELLGPDVELVERELDDAWMRDIGPTFVTNGR---------ELAAVDWVFNGWGAQD 112
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ W D ++AR + R+P ++V EGG+IHVDGEGT L T+ L RNP
Sbjct: 113 ---WARWEHDSKIARHVADLARVPVLSSTLVNEGGAIHVDGEGTVLLTDTVQLGPGRNPE 169
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGLFG 219
T+ + E E+ A LG K IWLP GL G
Sbjct: 170 WTRERAEAEIHAKLGTTKAIWLPHGLAG 197
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ NGG++ FGD D A + + FP+ V ++ AR I GGG IHCITQ
Sbjct: 276 SYINHYLCNGGVVLCAFGDPN-DEIAAGIFRRLFPERTVTLVD-ARTIFAGGGGIHCITQ 333
Query: 298 QQPAI 302
QQP I
Sbjct: 334 QQPKI 338
>gi|284035742|ref|YP_003385672.1| Agmatine deiminase [Spirosoma linguale DSM 74]
gi|283815035|gb|ADB36873.1| Agmatine deiminase [Spirosoma linguale DSM 74]
Length = 353
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 152/359 (42%), Gaps = 75/359 (20%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRV-FAKV-----ATAI 56
M+ PA G+ PAEW PH W+ WP R + + + F K I
Sbjct: 1 MSRIPAREGFFFPAEWHPHVATWLSWPHTEASWTKERQELMFPAYIDFIKAIAESEQVCI 60
Query: 57 SKFEPVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPK 116
+ + + A+ + A + + I ++ S N SW RD GP ++N
Sbjct: 61 NAHNDIVIQAAKLRLLAAGADM-SRITLLPHSTNDSWCRDHGPAFLINPEKNERMI---- 115
Query: 117 VAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTC 176
++W +N+WGG Y + D + +I L +++EGGS+ +G GT
Sbjct: 116 ---VNWGYNAWGGK----YPPYDRDDLIPVEIAHYRGLEYVTPGIIMEGGSVEFNGAGTV 168
Query: 177 LTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG------------ 224
LT+ CLLN+NRN HLT+ +IE L Y GV +++W+ G+ G DG
Sbjct: 169 LTSRACLLNQNRNAHLTQEKIEQYLCDYYGVQQVLWVEEGIVGDDTDGHIDDTVRFVNED 228
Query: 225 -------------------EAKPRLAGTRL------------------------AASYVN 241
E L RL ASY N
Sbjct: 229 TVVAAYEPNKNDANYPFLQEIHHELKQMRLLNGKQLNIVELPMPDPVESDGLRLPASYAN 288
Query: 242 FYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
F I NG +I P F K D +A+ ++ FP +++GI+ + +IV G G+ HC++QQ+P
Sbjct: 289 FLITNGAVIVPTFRCDK-DQQALDIIDTCFPDRKIIGID-STDIVWGLGSFHCLSQQEP 345
>gi|159128363|gb|EDP53478.1| porphyromonas-type peptidyl-arginine deiminase superfamily
[Aspergillus fumigatus A1163]
Length = 393
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 160/383 (41%), Gaps = 99/383 (25%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
Y+ PAE H +G+P R+ + D+A A +A+AIS FEPV + +
Sbjct: 21 YIYPAETSRHLATLLGFPSRHSISSAYYDNACTD---IANLASAISAFEPVRLYSRPEDL 77
Query: 72 ENARSQLPE----------NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
A+S + + NI I N W RDTGP V+ A S + I+
Sbjct: 78 PRAQSMVNQAIPKYTGNTSNISFIPFPTNHLWVRDTGPVYVLGTGDARS-----RRFAIN 132
Query: 122 WNFNSWGGVDDGCYRDWSLDLQ---------------VARKILSTERLPRFPHSMV---- 162
+ F WG D+ ++ + D Q AR+++ T+ P P ++V
Sbjct: 133 FRFREWGKRDEMESQERAADEQDWPIMTTARLDENATFARRVIETDVSPS-PVTLVESRV 191
Query: 163 -LEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLP--RGL-- 217
LEGG++ VDGEGT L TE ++N NRN L++ +IE EL+ LGV KIIW P +GL
Sbjct: 192 CLEGGALVVDGEGTLLATESSIINDNRNAGLSRSEIEAELQRLLGVEKIIWFPGRKGLDI 251
Query: 218 --------FGMIHDG-------------------------------------------EA 226
G I G E
Sbjct: 252 TDVHADAEVGFIRPGVVVLSRPHASVPRAWLDVYEEIREILTRSVDAKGRPFEIHTVDEP 311
Query: 227 KPRLAG----TRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERA 282
P L G A +YVNFY NGG+I PQFGD+ D AV + P V+
Sbjct: 312 DPALLGDLSYDEPATNYVNFYFVNGGLILPQFGDEVTDKAAVETFQKLCPG-RVIQPVYV 370
Query: 283 REIVLGGGNIHCITQQQPAIPTN 305
+ L GG IHC TQ A+P +
Sbjct: 371 HALPLAGGVIHCATQPVIAVPQD 393
>gi|70986004|ref|XP_748505.1| porphyromonas-type peptidyl-arginine deiminase superfamily
[Aspergillus fumigatus Af293]
gi|66846134|gb|EAL86467.1| porphyromonas-type peptidyl-arginine deiminase superfamily
[Aspergillus fumigatus Af293]
Length = 393
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 160/383 (41%), Gaps = 99/383 (25%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
Y+ PAE H +G+P R+ + D+A A +A+AIS FEPV + +
Sbjct: 21 YIYPAETSRHLATLLGFPSRHSISSAYYDNACTD---IANLASAISAFEPVRLYSRPEDL 77
Query: 72 ENARSQLPE----------NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
A+S + + NI I N W RDTGP V+ A S + I+
Sbjct: 78 PRAQSMVNQAIPKYTGNTSNISFIPFPTNHLWVRDTGPVYVLGTGDARS-----RRFAIN 132
Query: 122 WNFNSWGGVDDGCYRDWSLDLQ---------------VARKILSTERLPRFPHSMV---- 162
+ F WG D+ ++ + D Q AR+++ T+ P P ++V
Sbjct: 133 FRFREWGKRDEMESQERAADEQDWPIMTTAQLDENATFARRVIETDVSPS-PVTLVESRV 191
Query: 163 -LEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLP--RGL-- 217
LEGG++ VDGEGT L TE ++N NRN L++ +IE EL+ LGV KIIW P +GL
Sbjct: 192 CLEGGALVVDGEGTLLATESSIINDNRNAGLSRSEIEAELQRLLGVEKIIWFPGRKGLDI 251
Query: 218 --------FGMIHDG-------------------------------------------EA 226
G I G E
Sbjct: 252 TDVHADAEVGFIRPGVVVLSRPHASVPRAWLDVYEEIREILTRSVDAKGRPFEIHTVDEP 311
Query: 227 KPRLAG----TRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERA 282
P L G A +YVNFY NGG+I PQFGD+ D AV + P V+
Sbjct: 312 DPALLGDLSYDEPATNYVNFYFVNGGLILPQFGDEVTDKAAVETFQKLCPG-RVIQPVYV 370
Query: 283 REIVLGGGNIHCITQQQPAIPTN 305
+ L GG IHC TQ A+P +
Sbjct: 371 HALPLAGGVIHCATQPVIAVPQD 393
>gi|325961500|ref|YP_004239406.1| peptidylarginine deiminase-like protein [Arthrobacter
phenanthrenivorans Sphe3]
gi|323467587|gb|ADX71272.1| peptidylarginine deiminase-like enzyme [Arthrobacter
phenanthrenivorans Sphe3]
Length = 343
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 108/205 (52%), Gaps = 12/205 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDAL-HAQRVFAKVATAISKFEPVTVCASAAQWE 72
MPAEW+ H + WM +P + L A+ + +VA IS++EPVTV A
Sbjct: 1 MPAEWDVHQRTWMAFPPPNQTFGPSGSPTLDRARAAWTQVARTISRYEPVTVAAHPRDTT 60
Query: 73 NARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDD 132
A+ L E I V+E+ ++ +W RD+GPT + +A IDW FN WG
Sbjct: 61 AAKEWLGEGIAVVEVPLDDAWLRDSGPTFTRLRDGG--------LAAIDWVFNGWGAQQ- 111
Query: 133 GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
+ +W D VAR + + + P S+V EGG HVDGEGT L TE L+ RNP
Sbjct: 112 --WAEWGNDQGVARTVAAEAGVGVRPSSLVNEGGGFHVDGEGTVLLTETVQLDPARNPGA 169
Query: 193 TKGQIENELKAYLGVMKIIWLPRGL 217
TK +E E+ A LG K IWLPRGL
Sbjct: 170 TKESVEAEIHAVLGTSKAIWLPRGL 194
>gi|453069403|ref|ZP_21972664.1| Agmatine deiminase [Rhodococcus qingshengii BKS 20-40]
gi|452763202|gb|EME21484.1| Agmatine deiminase [Rhodococcus qingshengii BKS 20-40]
Length = 371
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 121/241 (50%), Gaps = 32/241 (13%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDAL-HAQRVFAKVATAISKFEPV 62
+G+ L ++MP E +PH + WM + W L QR A +A I++FEPV
Sbjct: 33 DGSNDLREWVMPEEGDPHKRTWMAFGASEAI---WGAALLPEVQRNLATIAQTIAQFEPV 89
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
++ + Q + ARS + ++ +I ++ W RDTGP V + AGID+
Sbjct: 90 SMLVRSEQLDLARSLVGPSVELIAAPLDDLWMRDTGPVFVKGNGTK---------AGIDF 140
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
NFN WG +D+ D QVA + + + P ++LEGG I VDGEGT + TE C
Sbjct: 141 NFNGWGE-----KQDFDQDGQVAAFVAARAGVESLPTDLILEGGGIEVDGEGTAIITESC 195
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNF 242
+LN NRNP +K +E EL LG+ KIIWL P +AG + + +F
Sbjct: 196 VLNNNRNPGWSKSDVEAELGPLLGLDKIIWL--------------PGIAGKDITDGHTDF 241
Query: 243 Y 243
Y
Sbjct: 242 Y 242
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 227 KPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIV 286
+P AA Y+NFY+ NG +I P+FGD + D A L + FP VV I I
Sbjct: 297 RPDFESDDFAAGYINFYVCNGAVIAPEFGDPEADQAARSELERLFPDRRVVQI-NIDAIA 355
Query: 287 LGGGNIHCITQQQPA 301
GGG IHC TQQ+PA
Sbjct: 356 AGGGGIHCTTQQEPA 370
>gi|398782305|ref|ZP_10546074.1| agmatine deiminase [Streptomyces auratus AGR0001]
gi|396996808|gb|EJJ07789.1| agmatine deiminase [Streptomyces auratus AGR0001]
Length = 346
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 109/213 (51%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISK-FEPVTV 64
TP G+ MP EW H + WM WP +AL R + FEPVTV
Sbjct: 3 TPVADGFRMPPEWARHERTWMAWPGPNLTFGEEGGEALTGARRAWAAVARAVRRFEPVTV 62
Query: 65 CASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
A Q E AR+ L I ++E ++ +W RD GPT + + ++A DW F
Sbjct: 63 VAGPGQSEAARALLGAGIDLVERPLDDAWMRDIGPTFLTDGQG--------RLAAADWVF 114
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL 184
N WGG + + W D ++ ++ + R+ S+V EGG +H+DGEGT L TE L
Sbjct: 115 NGWGGQE---WARWDHDEKIGAEVAALAGARRYASSLVNEGGGLHIDGEGTVLLTETVQL 171
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
+ RNP T+ ++E E+ A+LG K IWLPRGL
Sbjct: 172 DPGRNPGRTQREVEAEIHAHLGTTKAIWLPRGL 204
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ N G++ F D + D EA + + FP V ++ AR I GG IHCITQ
Sbjct: 284 SYINHYLCNDGVVLCGFDDPR-DEEAAALFRRLFPGRTVTLVD-ARTIFAAGGGIHCITQ 341
Query: 298 QQP 300
QQP
Sbjct: 342 QQP 344
>gi|441166167|ref|ZP_20968687.1| agmatine deiminase [Streptomyces rimosus subsp. rimosus ATCC 10970]
gi|440615956|gb|ELQ79118.1| agmatine deiminase [Streptomyces rimosus subsp. rimosus ATCC 10970]
Length = 349
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 115/213 (53%), Gaps = 12/213 (5%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWP-VRYERLDNWRDDALHAQRVFAKVATAISKFEPVTV 64
TPA G+ MPAEW PH + WM WP V + ++ A+R +A VA A+ +FEPVTV
Sbjct: 3 TPAADGFRMPAEWAPHERTWMAWPGVNATFGEEGGEELERARRAWAAVARAVRRFEPVTV 62
Query: 65 CASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
A Q + AR L I V+E +++ +W RD GP +V ++ +DW F
Sbjct: 63 VAGPGQADGARLLLGAGIDVVERALDDAWMRDIGPAFLVGGRG--------QLGAVDWVF 114
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL 184
N WG D C W D ++ + + S+V EGG +HVDGEGT L TE L
Sbjct: 115 NGWGEQDWAC---WERDAEIGGYVGGLAGARTYRSSLVNEGGGLHVDGEGTVLLTETVQL 171
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
+ RNP T+ ++E E+ A LG K IWLPRGL
Sbjct: 172 DPGRNPGRTREEVEAEIHACLGTTKAIWLPRGL 204
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ NGG++ FGD + D EA + + FP+ VV + AR I GG IHCITQ
Sbjct: 284 SYINHYLCNGGVVLCAFGDPR-DEEAAAIFRRLFPERAVVQAD-ARTIFAAGGGIHCITQ 341
Query: 298 QQPAIPT 304
QQP + T
Sbjct: 342 QQPKVGT 348
>gi|358011767|ref|ZP_09143577.1| Agmatine deiminase [Acinetobacter sp. P8-3-8]
Length = 381
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 118/217 (54%), Gaps = 26/217 (11%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYE-----RLDNWRDDALHAQRVFAKVATAISK 58
NGT + MP E E H++ WM + + ++ RDD A++A +I+
Sbjct: 42 NGTDTKNIGTMPDEAELHTRTWMVFGASDKIHEPKNINGLRDD-------LARIALSIAA 94
Query: 59 FEPVTVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKV 117
FEPV++ A + + AR+++ NI ++ +M+ W RDTGP V N + K+
Sbjct: 95 FEPVSILVRAEEMDIARAKMNHSNITLVTGTMDDFWARDTGPVFVKNAQN--------KL 146
Query: 118 AGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCL 177
GID+NFN WG + + D VA +IL+ + R ++ LEGG I VDG GT +
Sbjct: 147 TGIDFNFNGWGK-----KQSHNNDKTVAAQILNNVNIDRVSSTLTLEGGGIEVDGLGTAI 201
Query: 178 TTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLP 214
TE C+LN NRNP +TK E ELK LG+ K+IWLP
Sbjct: 202 ITESCVLNDNRNPGVTKAACEAELKRCLGISKVIWLP 238
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
AA Y+N+Y+ N +I P+FGD D EA + L FP +V I I GGG IHC
Sbjct: 316 FAAGYINYYVCNKAVIMPEFGDPVADAEAKQKLQALFPNRNIVQI-NIDYIAAGGGGIHC 374
Query: 295 ITQQQP 300
TQQQP
Sbjct: 375 TTQQQP 380
>gi|346318943|gb|EGX88545.1| putative peptidyl-arginine deiminase family protein [Cordyceps
militaris CM01]
Length = 338
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 115/218 (52%), Gaps = 19/218 (8%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M T AL MPAEW H + WP + + D + A+R A +A AI +FEPV
Sbjct: 1 MAATSALR---MPAEWSRHRRTLTAWPDQSSQKDA--ETLQGAERDVAAIANAIVEFEPV 55
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
T+ AR+ L ++ + E+ ++ W RDTGP V N A + G+D+
Sbjct: 56 TLLCRPRNVARARALLSPSVAIQELEVDELWLRDTGPVYVKNAEGA--------LLGVDF 107
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
NFN WG G ++D VAR +L + R +V EGG + VDGEGT L TE
Sbjct: 108 NFNYWGAKYPG-----TIDQTVARSVLRHDNTDRVQAPLVAEGGGLEVDGEGTLLVTESS 162
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGM 220
++N NRNP T+ QIE LK LG+ K++WL +GL G+
Sbjct: 163 VVNDNRNPGQTRAQIEAHLKTLLGLQKVLWL-KGLRGL 199
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N+ + NGG+I P+FGD+ D A +L Q FP +VV ++ LGGG IHC TQ
Sbjct: 276 SYLNYLLVNGGLIMPKFGDRVADERAATLLRQVFPDRKVVQVQLDSLRKLGGG-IHCATQ 334
Query: 298 QQP 300
QQP
Sbjct: 335 QQP 337
>gi|148554125|ref|YP_001261707.1| agmatine deiminase [Sphingomonas wittichii RW1]
gi|148499315|gb|ABQ67569.1| Agmatine deiminase [Sphingomonas wittichii RW1]
Length = 332
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 142/347 (40%), Gaps = 76/347 (21%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQR---VFAKVATAISKFEPVT-VCAS 67
Y PAEW PH W+G+P E W DD A+ FA+ A K E V V A
Sbjct: 4 YRQPAEWAPHDAVWIGFPSHPEL---WEDDLEPARAEVVAFARAVHAGGKGERVILVAAD 60
Query: 68 AAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSW 127
A + A + +VI W RD+ P IV + +A D+ FN W
Sbjct: 61 EASADRAAELAGDAAQVIVEPFGDIWLRDSAPIIVRGRDG---------LAATDFGFNWW 111
Query: 128 GGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
GG + D + ++ + P + EGG+I VDG G +TTE+CLLN N
Sbjct: 112 GG-----KYELPGDESIGARLAARTGHPVRTRDWIFEGGAIDVDGAGIGVTTEQCLLNPN 166
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGE-------------AKPRLAGTR 234
RNP L + IE L LGV +++WL GL DG A P AG
Sbjct: 167 RNPDLDRAAIEARLADGLGVERLLWLGDGLANDHTDGHVDNLARFVAPGVIAIPEPAGAD 226
Query: 235 ----------------------------------------LAASYVNFYIANGGIITPQF 254
+ ASY+NFYI N ++ P +
Sbjct: 227 DPNAAVYADARARALGFGLQVVGIPSPGAVESEGEDGAEIIPASYMNFYIGNAAVVVPLY 286
Query: 255 GDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
G D AV + FP VVG RA I+ GGG+ HCI+QQ PA
Sbjct: 287 GAPN-DEAAVAAIGALFPSRAVVGF-RADHILTGGGSFHCISQQIPA 331
>gi|229491588|ref|ZP_04385409.1| agmatine deiminase [Rhodococcus erythropolis SK121]
gi|229321269|gb|EEN87069.1| agmatine deiminase [Rhodococcus erythropolis SK121]
Length = 404
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 120/241 (49%), Gaps = 32/241 (13%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDAL-HAQRVFAKVATAISKFEPV 62
NG L ++MP E +PH + WM + W L QR A +A I++FEPV
Sbjct: 66 NGDDDLREWVMPEEGDPHKRTWMAFGASEAI---WGAALLPEVQRNLATIAQTIAQFEPV 122
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
++ + + + ARS + ++ +I ++ W RDTGP V + AGID+
Sbjct: 123 SMLVRSEELDLARSLVGPSVELIAAPLDDLWMRDTGPVFVKGNGTK---------AGIDF 173
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
NFN WG +D+ D QVA + + + P ++LEGG I VDGEGT + TE C
Sbjct: 174 NFNGWGE-----KQDFDQDGQVAAFVAARAGVESLPTDLILEGGGIEVDGEGTAIITESC 228
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNF 242
+LN NRNP +K +E EL LG+ KIIWL P +AG + + +F
Sbjct: 229 VLNNNRNPGWSKSDVEAELGPLLGLDKIIWL--------------PGIAGKDITDGHTDF 274
Query: 243 Y 243
Y
Sbjct: 275 Y 275
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 227 KPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIV 286
+P AA Y+NFY+ NG +I P+FGD + D A L + FP VV I I
Sbjct: 330 RPDFESDDFAAGYINFYVCNGAVIAPEFGDPEADQAARSELERLFPDRRVVQI-NIDAIA 388
Query: 287 LGGGNIHCITQQQPA 301
GGG IHC TQQ+PA
Sbjct: 389 AGGGGIHCTTQQEPA 403
>gi|296137922|ref|YP_003645165.1| Agmatine deiminase [Tsukamurella paurometabola DSM 20162]
gi|296026056|gb|ADG76826.1| Agmatine deiminase [Tsukamurella paurometabola DSM 20162]
Length = 374
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 112/204 (54%), Gaps = 20/204 (9%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNW-RDDALHAQRVFAKVATAISKFEPVTVCASAAQWE 72
MP E +PH + WM + R D W +D A QR A +ATAI++FEPV++ SA Q
Sbjct: 43 MPDEGDPHERTWMAFAARE---DIWGKDRAPGVQRSLALIATAIARFEPVSMLVSADQMG 99
Query: 73 NARSQL--PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
A+ + + ++ ++ W RDTGP V G Q +AG+D+NFN WG
Sbjct: 100 RAKELIGNAPGVTLVAAELDDLWIRDTGPVFV-------KGDQG--LAGVDFNFNGWGN- 149
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
+ + D +VA + + R +VLEGG I VDGEGT + TE C+LN NRNP
Sbjct: 150 ----KQRHTSDARVAGLVTAQARAEVLRTDLVLEGGGIEVDGEGTAIITESCVLNDNRNP 205
Query: 191 HLTKGQIENELKAYLGVMKIIWLP 214
TK Q+E EL LG+ ++IWLP
Sbjct: 206 GWTKQQVEAELSDLLGIDRVIWLP 229
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
AA Y+NFY+ NG +I+PQFGD + DGEA L + FP EVV ++ I GGG IHC
Sbjct: 308 FAAGYINFYLCNGAVISPQFGDAETDGEARATLQRLFPGREVVQLD-IDPIAGGGGGIHC 366
Query: 295 ITQQQP 300
TQQQP
Sbjct: 367 ATQQQP 372
>gi|227523618|ref|ZP_03953667.1| agmatine deiminase, partial [Lactobacillus hilgardii ATCC 8290]
gi|227089190|gb|EEI24502.1| agmatine deiminase [Lactobacillus hilgardii ATCC 8290]
Length = 283
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/135 (50%), Positives = 89/135 (65%), Gaps = 9/135 (6%)
Query: 85 IEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDLQV 144
+EMS + SW RD GPT V N++ + G+DW FN+WGG+ DG Y W D +V
Sbjct: 1 VEMSNDDSWIRDCGPTFVTNENG--------DLRGVDWTFNAWGGLVDGLYFPWDKDDRV 52
Query: 145 ARKILSTERLPRFP-HSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKA 203
A+K+ E R+ +LEGGSIHVDGEGT +TTEECLL++ RN L+K QIEN LK
Sbjct: 53 AQKVTELEHADRYRLDDFILEGGSIHVDGEGTLITTEECLLSEGRNSQLSKEQIENVLKE 112
Query: 204 YLGVMKIIWLPRGLF 218
YL + K+IWL RG++
Sbjct: 113 YLNLDKVIWLKRGIY 127
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Query: 228 PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVL 287
PR G RLAASYVN+Y ANGGI+ P+FGD D +A L + +P ++VG+ AREI+L
Sbjct: 210 PRQEGDRLAASYVNYYTANGGIVFPEFGDPN-DEKAKETLQRLYPDRQIVGVP-AREILL 267
Query: 288 GGGNIHCITQQQPA 301
GGGNIHCITQQ PA
Sbjct: 268 GGGNIHCITQQVPA 281
>gi|381396564|ref|ZP_09921979.1| Porphyromonas-type peptidyl-arginine deiminase [Microbacterium
laevaniformans OR221]
gi|380776106|gb|EIC09395.1| Porphyromonas-type peptidyl-arginine deiminase [Microbacterium
laevaniformans OR221]
Length = 348
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 111/208 (53%), Gaps = 11/208 (5%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQ 70
G+ MP+E PH++ WM +PV L + + + +VA AI++FEPVT+ A+
Sbjct: 2 GWRMPSETAPHARTWMAFPVEGPTLGDTDAEREEGYAAWTEVAAAIARFEPVTMVVDPAE 61
Query: 71 WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG-IDWNFNSWGG 129
+AR LP ++ ++E ++ W RD GPT V++ + P + G +DW FN WG
Sbjct: 62 TAHARRMLPGDVTILEAPVDEFWMRDHGPTFVIDD-------ERPSILGAVDWIFNGWGA 114
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
D + W + AR + + ++V EGG HVDGEGT L T+ L+ RN
Sbjct: 115 HD---WARWERSAEHARIVAAEVGAELISSTLVAEGGGFHVDGEGTVLLTDTVQLDPRRN 171
Query: 190 PHLTKGQIENELKAYLGVMKIIWLPRGL 217
P+ + ++E EL LG IWLPRGL
Sbjct: 172 PYADRARVEAELARTLGTTTAIWLPRGL 199
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 71/147 (48%), Gaps = 18/147 (12%)
Query: 165 GGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGV--------MKIIWLPRG 216
G + HVD T + LL+ R+ + L+ L ++++ LP
Sbjct: 207 GTNGHVDIVATFPSPGRVLLHTQRDAAHPDHAVSAALRELLATQTDAAGRRLEVVELPAP 266
Query: 217 LFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEV 276
+ DGE + SYVN + GG+I FG+ K D EA +L+ A+P E+
Sbjct: 267 --ATLRDGEGF-------VDWSYVNHLVVGGGVIACGFGEDKADAEARAILADAYPGREI 317
Query: 277 VGIERAREIVLGGGNIHCITQQQPAIP 303
V ++ AR I GG IHCITQQQPA+P
Sbjct: 318 VTVD-ARPIFARGGGIHCITQQQPALP 343
>gi|397779393|ref|YP_006543866.1| agmatine deiminase [Methanoculleus bourgensis MS2]
gi|396937895|emb|CCJ35150.1| agmatine deiminase [Methanoculleus bourgensis MS2]
Length = 633
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 117/229 (51%), Gaps = 28/229 (12%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP GY MPAEWEPH W+ WP E D A+ + ++ A+ E V +
Sbjct: 289 TPKALGYHMPAEWEPHDAIWLSWPHDRETFP----DLAAAEAAYVEIIAALRGSEIVNLL 344
Query: 66 ASAAQWENARSQLPENIRVIEMSMNGS----------WFRDTGPTIVVNKSSASSGAQAP 115
+ E R+++ + + G WFRD GPT VVN+ + S
Sbjct: 345 VTG---ERMRTRVEAMLEEEGVDTGGVCFHVADYADVWFRDYGPTFVVNRKAGS------ 395
Query: 116 KVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGT 175
+A + W FN+WGG D + L + R + LP F +++EGGSI V+G GT
Sbjct: 396 -LAMVHWTFNAWGGKYPELMGDTRIPLIMNRDM----DLPVFTPGIIMEGGSIEVNGRGT 450
Query: 176 CLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
+TTE CLLN NRNP L++ +IE L+AYLGV +IWL +G+ G DG
Sbjct: 451 VITTEACLLNPNRNPDLSREEIEAYLEAYLGVSHVIWLKQGIAGDDTDG 499
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RL ASY NFYI N ++ P FG D A+ + Q FP EVVGI+ +V G G IH
Sbjct: 563 RLPASYANFYIGNTVVLVPVFGHPN-DEVALARIQQVFPDREVVGID-CTAMVPGFGAIH 620
Query: 294 CITQQQPAI 302
CI+QQQP++
Sbjct: 621 CISQQQPSV 629
>gi|296282103|ref|ZP_06860101.1| peptidylarginine deiminase [Citromicrobium bathyomarinum JL354]
Length = 334
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 148/342 (43%), Gaps = 70/342 (20%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKF--EPVTVCASAAQW 71
+PAEWEP W+G+P D W D AQ A A A+++ E + AA
Sbjct: 11 LPAEWEPQDWLWIGFP---HDPDEWGDAFAPAQEEIAAFANAVAESGQEVRLLVRDAANE 67
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
A++ + + + + W RDTGP + A+ A P FN WGG
Sbjct: 68 ARAKALVTGAVHLERRTYGDVWLRDTGP--LTGFDGATRRAVRP-------GFNGWGG-- 116
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ D +A ++ E LP +LEGG+I DG+GT LTTE+CLLN NRNP
Sbjct: 117 ---KYLMAGDDAIAAELAGDEGLPVDRPDWILEGGAIDTDGQGTVLTTEQCLLNPNRNPA 173
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG--------------------------- 224
L + QIE L LG+ +++WL GL DG
Sbjct: 174 LGREQIEQRLARDLGLTRVVWLGDGLLNDHTDGHVDNLARFVAPGMVALAEPFGSDDPNA 233
Query: 225 ----EAKPRL--AGTRLA----------------ASYVNFYIANGGIITPQFGDKKWDGE 262
+AK RL AG +A ASY NF IAN + P FG + D +
Sbjct: 234 DVYADAKARLEAAGLTVAAIPSPGLVTRGDWVEPASYANFLIANSIVAVPTFGVPQ-DED 292
Query: 263 AVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIPT 304
AV + FP +G+ R ++ GGG HC + Q P+ PT
Sbjct: 293 AVAAIDALFPDRSAIGLPM-RAVLAGGGGFHCASMQMPSAPT 333
>gi|297202570|ref|ZP_06919967.1| agmatine deiminase [Streptomyces sviceus ATCC 29083]
gi|197709901|gb|EDY53935.1| agmatine deiminase [Streptomyces sviceus ATCC 29083]
Length = 341
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 114/208 (54%), Gaps = 12/208 (5%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
Y MP EW PH + WM WP + + A+ +A VA A+ +FEPVT+
Sbjct: 3 YRMPPEWAPHERTWMAWPGPNPTFTD-DGELAAARAAWASVARAVRRFEPVTMVHGPGHA 61
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
E+AR L ++ ++E ++ +W RD GPT V ++ ++A +DW FN WGG D
Sbjct: 62 ESARELLGPDVALVERELDDAWMRDIGPTFVKDEEG--------RLAAVDWVFNGWGGQD 113
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ W D ++AR++ +P +V EGG++HVDG+GT L T+ L + RNP
Sbjct: 114 ---WARWEHDAKIARQVADLAGVPVLSSPLVNEGGALHVDGDGTVLLTDTVQLGEGRNPG 170
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGLFG 219
T+ Q+E E+ LG + IWLPRGL G
Sbjct: 171 WTREQVEAEIHDRLGTTRAIWLPRGLTG 198
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ NGG++ F D + D A + + FP+ V ++ AR I GGG IHC+TQ
Sbjct: 276 SYINHYLCNGGVVLCGFDDPR-DELAAGIFRRLFPERTVTLVD-ARTIFAGGGGIHCVTQ 333
Query: 298 QQP 300
QQP
Sbjct: 334 QQP 336
>gi|119503728|ref|ZP_01625810.1| hypothetical protein MGP2080_01356 [marine gamma proteobacterium
HTCC2080]
gi|119460236|gb|EAW41329.1| hypothetical protein MGP2080_01356 [marine gamma proteobacterium
HTCC2080]
Length = 330
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 149/344 (43%), Gaps = 71/344 (20%)
Query: 13 LMPAEWEPHSQCWMGWPVR-YERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+MP EW PHS WMG+P Y D DD A +A VA I EPV + Q
Sbjct: 4 VMPPEWAPHSATWMGFPAAAYPEADVSNDDVWQA---WATVANVIVDHEPVNMLCRPEQL 60
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
AR L + + E + +W RDTGPT V +A +G +A +DW FN WG
Sbjct: 61 PIARRLLSSAVTLHEFPIEDAWLRDTGPTFV----AADNGLKA-----VDWRFNGWG--- 108
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
D W D ++A I + R + EGG +HV G+G L T+ L+ +RNP
Sbjct: 109 DNTTFAWGEDAKIATHIAELLDIERISSQLTNEGGGLHVSGDGLVLLTDTVQLDPDRNPK 168
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGLFG-----------------------MIHDGEAKP 228
T+ Q+E E+ LG IWLP GL+ ++H + +
Sbjct: 169 WTRRQVEEEVHRLLGTGSAIWLPHGLWRDYAAHGTRGHVDIVACFNELGSVLLHRQQDRS 228
Query: 229 R-----------------LAGTRLAA--------SYVNFYIANGGII-----TPQFGDKK 258
L T + A +V++ N ++ P F D
Sbjct: 229 HPDCERYELHRQALEQADLKYTDIVAPKTLEDRHGWVDYSYINHYVLNGAVVVPTFSDPN 288
Query: 259 WDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
DG A L++A+P+ ++ ++ AR I GG IHCITQQQP I
Sbjct: 289 -DGLACEQLAEAWPERDIRIVD-ARVIFAMGGGIHCITQQQPRI 330
>gi|108743474|dbj|BAE95577.1| putative agmatine deiminase [Streptomyces kanamyceticus]
Length = 384
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 113/204 (55%), Gaps = 17/204 (8%)
Query: 10 HGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
G M AEWE H++ +M WP E + W DD + + A++A +I+++E V + A
Sbjct: 48 EGRRMGAEWESHARTFMSWPA-LESV--WEDDLRYVREDIARIARSIAEYEYVVMMARPD 104
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
Q + A+ ++ VI ++++ W RDT P V + KV GID+NFN WG
Sbjct: 105 QLKAAQKACGRDVEVIPLAVDDLWARDTVPVFVEDDG---------KVTGIDFNFNGWGN 155
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
++ D QV RK+L+ +PR +V EGGS DGEGT L TE ++N NRN
Sbjct: 156 -----KQEHDNDGQVGRKLLAEYDIPRKKAPLVAEGGSFETDGEGTLLITESSIVNDNRN 210
Query: 190 PHLTKGQIENELKAYLGVMKIIWL 213
++ QIE+ELK LG+ K+IWL
Sbjct: 211 RGKSRDQIEDELKRTLGIKKVIWL 234
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 232 GTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGN 291
G ++Y NFY+AN + P+FGD+K D A +L + FPK +VV I I GGG
Sbjct: 312 GDDFVSTYANFYVANDSVFIPKFGDRKADKRAKSILQEHFPKRDVVQIN-IDTIASGGGG 370
Query: 292 IHCITQQQPAIPTN 305
IHC T +P P +
Sbjct: 371 IHCSTHDEPGKPVD 384
>gi|432331570|ref|YP_007249713.1| peptidylarginine deiminase-like enzyme [Methanoregula formicicum
SMSP]
gi|432138279|gb|AGB03206.1| peptidylarginine deiminase-like enzyme [Methanoregula formicicum
SMSP]
Length = 641
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 112/225 (49%), Gaps = 20/225 (8%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEWEPH W+ WP + D Q + +A +
Sbjct: 299 TPRNRGFHMPAEWEPHDAVWISWP---HNTYTFPDIPAVEQAYYEFIAHVHTSERVEVFV 355
Query: 66 ASAAQWENARSQLPE------NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
+A + R++L E + + + W RD GPT VV+++ K+A
Sbjct: 356 PTAVVYRKVRARLKEMGIDSDQVTLHTTGYSDVWIRDYGPTFVVSRA-------LKKLAM 408
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTT 179
+ W FN+WGG + +RD ++ L + R+ LP F +V+EGGS +G GT LTT
Sbjct: 409 VRWEFNAWGGKYEDQFRDGTISLHMNRRF----NLPLFEPGIVMEGGSFDTNGRGTVLTT 464
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
CLLN NRNP L+KG+IE L YLG K+IWL G+ G DG
Sbjct: 465 RACLLNPNRNPSLSKGEIEGLLCEYLGAEKVIWLNEGIEGDDTDG 509
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 208 MKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVL 267
+ +I LP + G + D + G R ASY NFYI N +I P F D + D A+ +L
Sbjct: 557 LTVIRLP--MPGRVEDAD------GQRYPASYTNFYIGNTVVIVPVFNDPR-DAAALDIL 607
Query: 268 SQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
FP V+GI AR +V G G HC TQQQP I
Sbjct: 608 RMIFPDRTVIGI-LARAMVEGFGTFHCATQQQPRI 641
>gi|407645667|ref|YP_006809426.1| agmatine deiminase [Nocardia brasiliensis ATCC 700358]
gi|407308551|gb|AFU02452.1| agmatine deiminase [Nocardia brasiliensis ATCC 700358]
Length = 342
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 149/350 (42%), Gaps = 71/350 (20%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
++MP+E P + WM +P + + A A+ +A+VA I +FEPVT+
Sbjct: 3 WVMPSETAPQERIWMAFPPLGASVFATAESAHEAREAWARVAHEILEFEPVTMVVDPRDR 62
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
+ AR L + + V+E ++ +W RD GP+ V++ S GA +DW FN WG +
Sbjct: 63 QAARKYLSDMVDVLEAPLDDAWMRDIGPSFVLDADSGRLGA-------VDWTFNGWGRQE 115
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ +W+ D ++ + +V EGG I VDG GT L TE L+ RNP
Sbjct: 116 ---WANWARDSEIGATVARAAGAETVGSKLVNEGGGIQVDGLGTVLVTETVQLDPMRNPG 172
Query: 192 LTKGQIENEL-------------------------KAYLGVMKIIWLPRGLFGMIHDGEA 226
L K +E EL + ++ ++ I P L A
Sbjct: 173 LDKAAVEAELARTIGARHVIWLPRGLTRDNEQHGTRGHVDIVAAIPAPGTLLVHAQRDAA 232
Query: 227 KPRLAGTR----------------------------------LAASYVNFYIANGGIITP 252
P A TR + SY+N + N G+I
Sbjct: 233 HPDWAVTRELLALLPDTTDAGGRAWEIVELPAPRVLRDREGWVDYSYINHLVVNDGVIAC 292
Query: 253 QFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
FGD DG A +L++ +P +V ++ ARE GG IHCITQQQP +
Sbjct: 293 GFGDPN-DGVAQGILAEMYPGRQVRTVD-AREFFARGGGIHCITQQQPRV 340
>gi|50955697|ref|YP_062985.1| hypothetical protein Lxx21960 [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50952179|gb|AAT89880.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 344
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 154/349 (44%), Gaps = 71/349 (20%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAE PH + W+ +P L A A + A A+++FEPV + ++ E
Sbjct: 5 MPAETAPHERTWIAFPRAGITLGENAASAEEAYAAWTAAAHAVAEFEPVAMVVDPSESER 64
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG-IDWNFNSWGGVDD 132
A L +I +E ++ W RD GPT VV+ + P V G +DW FN WGG
Sbjct: 65 AARMLGSHIDQVEAPLDEFWMRDVGPTFVVDD-------ERPGVLGAVDWTFNGWGGP-- 115
Query: 133 GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
+ W ++AR + ++V EGG IHVDGEGT L TE L+ RNP+
Sbjct: 116 -AWSQWRASAEIARFVAERIGAELISSALVNEGGGIHVDGEGTVLLTETVQLDPRRNPYA 174
Query: 193 TKGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIH------- 222
K ++E EL +G +WLPRGL FG ++H
Sbjct: 175 GKARVEAELARTIGATHAVWLPRGLTRDYGEFGTNGHVDIVTAIPSPGRLLLHTQRNPGH 234
Query: 223 -----DGEAKPRLAGTRLAA------------------------SYVNFYIANGGIITPQ 253
E + LAGT AA SYVN + GI+
Sbjct: 235 PDFAVSRELRAFLAGTTDAAGRPWEIVELPAPETLRDEEGFVDWSYVNHLMVGDGIVACG 294
Query: 254 FGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
FG+ + + EA +L A+P V ++ +R I GG IHCITQQQPA+
Sbjct: 295 FGEGRANAEAAAILEAAYPGRRVTMVD-SRPIFARGGGIHCITQQQPAV 342
>gi|116753402|ref|YP_842520.1| peptidyl-arginine deiminase [Methanosaeta thermophila PT]
gi|116664853|gb|ABK13880.1| agmatine deiminase [Methanosaeta thermophila PT]
Length = 624
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 114/225 (50%), Gaps = 21/225 (9%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP+ GY MPAEWE H W+ WP + + D +R + + A+ E V +
Sbjct: 285 TPSSEGYHMPAEWERHDGVWLAWPHDTDTFN----DIDSVERAYVSMIKALHVGETVNLL 340
Query: 66 ASAAQWENARSQLPE------NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
+ L + ++R+ + WFRD GPT VVNK G A
Sbjct: 341 VRDEEMRERVEHLLQRDVRMSSLRIHTIDYADVWFRDYGPTFVVNKKEKRLGMVA----- 395
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTT 179
WNFN+WGG Y + D+++ I + F +VLEGGSI V+G GT +TT
Sbjct: 396 --WNFNAWGGK----YCELMGDVKIPCYIARDLGVRCFRPGIVLEGGSIDVNGSGTLMTT 449
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
E+CLLN NRNP +++ +E L+ YLGV KIIWL RG+ G DG
Sbjct: 450 EQCLLNPNRNPLMSRWDMEFYLREYLGVRKIIWLRRGIAGDDTDG 494
>gi|330509075|ref|YP_004385503.1| peptidyl-arginine deiminase/hydrolase fusion protein [Methanosaeta
concilii GP6]
gi|328929883|gb|AEB69685.1| porphyromonas-type peptidyl-arginine deiminase/hydrolase fusion
protein [Methanosaeta concilii GP6]
Length = 663
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 115/226 (50%), Gaps = 18/226 (7%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP G+ MPAEWE H W+ WP E D + + + A+ K E V +
Sbjct: 317 TPLQLGFHMPAEWEEHEAIWLSWPYDQETFF----DIEKVEDAYIAIIKAMHKSEMVNLL 372
Query: 66 AS-----AAQWENARSQLPENIRVIEMSMNGS--WFRDTGPTIVVNKSSASSGAQAPKVA 118
+A E R + E +R+ +N + WFRD GPT VV++ +A
Sbjct: 373 VRDEMMLSAVIERLREEKVELLRIRFHQINYADVWFRDYGPTFVVSRGENKG---MDNIA 429
Query: 119 GIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLT 178
+ W FN+WG G RD + + + ++ F +VLEGGSI V+G GT LT
Sbjct: 430 MVAWTFNAWGEKYPGLMRDTRIPCLINDDL----KMECFIPGIVLEGGSIDVNGSGTVLT 485
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
TE+CLLN+NRNP L K +IE+ LK YLG K+IWL G+ G DG
Sbjct: 486 TEQCLLNRNRNPGLNKEEIESYLKEYLGARKVIWLKEGIAGDDTDG 531
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RL ASY NFYI N ++ P F ++ D +A++++ AFP VVGI+ RE+V G G IH
Sbjct: 596 RLPASYANFYIGNDVVLVPLFRNEN-DQKALKIIQGAFPDRMVVGID-CREMVEGLGTIH 653
Query: 294 CITQQQPAI 302
CI+QQQP I
Sbjct: 654 CISQQQPKI 662
>gi|357975943|ref|ZP_09139914.1| agmatine deiminase [Sphingomonas sp. KC8]
Length = 327
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 147/341 (43%), Gaps = 71/341 (20%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQR---VFAKVATAISKFEPVT-VCAS 67
Y P EW H + W+G+P E W++D A+ FA+ A E V V A
Sbjct: 4 YRQPPEWAAHDRVWIGFPSHAEL---WQEDLEPAREEVVAFARAVDADGAGERVVLVAAD 60
Query: 68 AAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSW 127
A + A + ++ V+ W RDTGP IV G P +D+ FN W
Sbjct: 61 KASAKAALAMAGASVDVVTAPFGDIWLRDTGPIIV-------HGGGVPTA--LDFGFNGW 111
Query: 128 GGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
GG D D + R + R P + EGG+I VDG G +TTE+CLLN N
Sbjct: 112 GG-----KYDLPHDDTIGRALAEAARFPVKTCDWIFEGGAIDVDGTGLVVTTEQCLLNPN 166
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGE--------AKPRLA-------- 231
RNP+L++G +E LKA LG+ +++WL GL DG + R+A
Sbjct: 167 RNPYLSRGDVEARLKADLGLDRVLWLGNGLLNDHTDGHVDNLARFVGEGRIAIPEPTTDD 226
Query: 232 --------------------------------GTRLAASYVNFYIANGGIITPQFGDKKW 259
G + ASY+NFYI N ++ P +G
Sbjct: 227 PNEAIYRDAAARARAFGLEVVGVPSPGKVERDGEIVPASYMNFYIGNAAVVVPLYGAAN- 285
Query: 260 DGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
D AV + FP +G RA I+ GGG+ HCI+QQ P
Sbjct: 286 DDAAVAAIGALFPGRRTIGF-RADHILTGGGSFHCISQQIP 325
>gi|383642783|ref|ZP_09955189.1| agmatine deiminase [Sphingomonas elodea ATCC 31461]
Length = 325
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 144/341 (42%), Gaps = 75/341 (21%)
Query: 15 PAEWEPHSQCWMGWPVRYERLDNWRDDALHAQR---VFAKVATAISKFEPVT-VCASAAQ 70
P EW PH W+G+P D W +D A+ FA+ A + E V V A A
Sbjct: 6 PPEWAPHDAVWIGFP---SHADLWVEDLEPAREEVIAFARAVHAEGRGERVILVAADDAA 62
Query: 71 WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
E AR+ + V+ W RDT I + + D+ FN WGG
Sbjct: 63 AETARTMAGDAAEVVTELFGDIWLRDTAGIITGDGVAQ------------DFGFNGWGG- 109
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
D D + ++ + L H VLEGG+I DG G C+TTE+CLLN NRNP
Sbjct: 110 ----KYDLEGDDTIGARLATRRGLTARKHGWVLEGGAIDGDGSGLCVTTEQCLLNPNRNP 165
Query: 191 HLTKGQIENELKAYLGVMKIIWLPRGL--------------------------------F 218
L + ++E +L + LG +++WL GL
Sbjct: 166 ELGRAEVEAKLASDLGYDRVLWLGDGLANDHTDGHVDNLARFVGPNRLLIPTPAEDDPNA 225
Query: 219 GMIHDGEAKPRLAGTRLA-----------------ASYVNFYIANGGIITPQFGDKKWDG 261
G+ D A+ G + ASY+NFYI N ++ P +G D
Sbjct: 226 GIYADAVARAEAFGVEVVRMPSPGTVLDEEGEVIPASYMNFYIGNAAVVVPLYGQPN-DQ 284
Query: 262 EAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
A++ L FP +VG +RA I+ GGG+ HCI+QQ P +
Sbjct: 285 AAIQTLQGIFPGRTIVG-QRADHILTGGGSFHCISQQIPTL 324
>gi|374620736|ref|ZP_09693270.1| peptidylarginine deiminase-like enzyme [gamma proteobacterium
HIMB55]
gi|374303963|gb|EHQ58147.1| peptidylarginine deiminase-like enzyme [gamma proteobacterium
HIMB55]
Length = 334
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 143/341 (41%), Gaps = 71/341 (20%)
Query: 14 MPAEWEPHSQCWMGWPV-RYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWE 72
MP EW H WMG+P Y+ DDA A ++ VA +IS+ E V + Q
Sbjct: 6 MPPEWAKHEATWMGFPTGAYDTSGITDDDAFDA---WSTVANSISEHEQVNMLCHPDQIS 62
Query: 73 NARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDD 132
A +L I + ++ +W RDTGPT V + + GIDW FN WG D
Sbjct: 63 IATRKLSSAITLHPFEIDDAWLRDTGPTFVCKNGA---------LGGIDWVFNGWG---D 110
Query: 133 GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
DW D +VA I+ R +V EGG I V+G G L TE L+ RNP
Sbjct: 111 HTAFDWRSDAKVASHIIELAGATRLASDLVNEGGGITVNGGGDVLLTETVQLDPGRNPSR 170
Query: 193 TKGQIENELKAYLGVMKIIWLPRGL------------------------------FGMIH 222
K +ENE+ LG + IW RGL F H
Sbjct: 171 DKASVENEVHPLLGTSRAIWFERGLWRDYQDHGTRGHVDMIAAFAPDGSVLLHRQFDTGH 230
Query: 223 DGEA--------------------KPRLAGTRLA---ASYVNFYIANGGIITPQFGDKKW 259
EA PR+ ++ SY+N YI NG ++ P F D+
Sbjct: 231 PDEALWQDQCRVLEDAGFKVRAMPAPRVTRDNISWVDYSYINHYIGNGFVLVPAFADRT- 289
Query: 260 DGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
D AV +L +P V ++ AR I GG IHCITQQQP
Sbjct: 290 DEHAVEILKDLYPDRHVESLD-ARVIFAMGGGIHCITQQQP 329
>gi|341613415|ref|ZP_08700284.1| peptidylarginine deiminase [Citromicrobium sp. JLT1363]
Length = 328
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/347 (32%), Positives = 144/347 (41%), Gaps = 89/347 (25%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKF--EPVTVCASAAQW 71
+PAEWEP W+G+P D W D AQ A A A+++ E + AA
Sbjct: 8 LPAEWEPQDWLWIGFP---HDPDEW-DVLAAAQEEVAGFANAVAESGQEVRLLVRDAANE 63
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG-- 129
ARS + + + S W RDTGP IV++++ A + FN WGG
Sbjct: 64 ARARSLVSGAVTLERRSYGDIWLRDTGP-IVLDRAGIR--------AAVRPGFNGWGGKY 114
Query: 130 -------VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
+ + RD LDL VLEGG+I DG GT LTTE+C
Sbjct: 115 LMAGDQTIGEELARDAGLDLDRP--------------DWVLEGGAIDTDGAGTVLTTEQC 160
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG------------------ 224
LLN NRNP LT+ QIE+ L G+ ++IWL GL DG
Sbjct: 161 LLNPNRNPSLTREQIEDRLAKDFGLTRVIWLRDGLLNDHTDGHVDNLARFVAAGTVALAE 220
Query: 225 -------------EAKPRLAGTRLA------------------ASYVNFYIANGGIITPQ 253
+AK RL LA ASY NF I N +I P
Sbjct: 221 PFGADDPNAAIYADAKARLERAGLAVAPIPSPGRISRGPFVEPASYANFLICNSLVIVPA 280
Query: 254 FGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
FG + D EAV + FP VG+ R I+ GGG HC + Q P
Sbjct: 281 FGVPQ-DAEAVAAIDALFPDRTAVGLP-MRNILAGGGGFHCASMQMP 325
>gi|414580489|ref|ZP_11437630.1| putative agmatine deiminase [Mycobacterium abscessus 5S-1215]
gi|420877666|ref|ZP_15341034.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0304]
gi|420883170|ref|ZP_15346532.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0421]
gi|420889183|ref|ZP_15352533.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0422]
gi|420889245|ref|ZP_15352594.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0422]
gi|420894299|ref|ZP_15357640.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0708]
gi|420899257|ref|ZP_15362590.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0817]
gi|420903164|ref|ZP_15366487.1| putative agmatine deiminase [Mycobacterium abscessus 5S-1212]
gi|420971760|ref|ZP_15434954.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0921]
gi|392086614|gb|EIU12438.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0304]
gi|392088333|gb|EIU14154.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0421]
gi|392089082|gb|EIU14901.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0422]
gi|392089379|gb|EIU15197.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0422]
gi|392101192|gb|EIU26982.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0708]
gi|392101506|gb|EIU27295.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0817]
gi|392109709|gb|EIU35482.1| putative agmatine deiminase [Mycobacterium abscessus 5S-1212]
gi|392120313|gb|EIU46080.1| putative agmatine deiminase [Mycobacterium abscessus 5S-1215]
gi|392166872|gb|EIU92554.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0921]
Length = 340
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 153/348 (43%), Gaps = 72/348 (20%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+LMP E + WM +P + + + A A+ +A VA AI FEPV++ + A
Sbjct: 3 WLMPPETAAQERIWMAFPPQGASVFEDAESAHAARTAWAAVAHAIIDFEPVSMIVAPADR 62
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
A L I V+E ++ +W RD GPT V +VA +DW FN WG D
Sbjct: 63 AVAPKYLSREIDVVEAPLDDAWMRDIGPTFVRGTDG--------RVAAVDWVFNGWGARD 114
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ W D + R + + S+V EGG I VDGEGT L TE L+ +RNP
Sbjct: 115 ---WARWDNDAHIGRFVGQLAGVEIVSSSLVNEGGGIQVDGEGTVLVTETVQLDPSRNPG 171
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGL------FGM-------------------IHDGEA 226
L + +E EL +G +IWLPRGL FG + + A
Sbjct: 172 LDRHAVEAELARTIGARHVIWLPRGLTRDAERFGTRGHVDILVAIPSPGRLLVHVQNDPA 231
Query: 227 KPRLAGTR-----LAAS-----------------------------YVNFYIANGGIITP 252
P A T+ LA S Y+N + N G+I
Sbjct: 232 HPDHAITKEIVDLLAQSHDANGKVWEITPIPAPSVLRDSESWVDYSYINHLVVNDGVIAC 291
Query: 253 QFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
+FGD D A +L++ +P VV ++ AREI GG IHCITQQQP
Sbjct: 292 RFGDAA-DDAATAILAEEYPGRRVVTVD-AREIFARGGGIHCITQQQP 337
>gi|424854719|ref|ZP_18279077.1| agmatine deiminase [Rhodococcus opacus PD630]
gi|356664766|gb|EHI44859.1| agmatine deiminase [Rhodococcus opacus PD630]
Length = 337
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MP+E EP + WM +P + DDA A+ + VA I++FEPVT+ A +
Sbjct: 1 MPSETEPQERVWMAFPPLGASMTATADDAHEARTAWTAVAHTIAEFEPVTMVVDPADRDV 60
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
AR L +I V+E ++ +W RD GPT V+++ ++ +DW FN WG +
Sbjct: 61 ARQYLSADIDVVEAPLDDAWMRDIGPTFVLDEDD--------RLGAVDWTFNGWGQQE-- 110
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ W D + ++ P SMV EGG I VDG GT L TE L+ RNP L
Sbjct: 111 -WATWDRDRSIGAAVIGWSGAQAVPSSMVNEGGGIQVDGRGTVLVTETVQLDPLRNPGLD 169
Query: 194 KGQIENELKAYLGVMKIIWLPRGL 217
+E EL +G ++WLPRGL
Sbjct: 170 AAGVEAELARTIGAEHVVWLPRGL 193
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N + NGG+I F D D A +LS +P VV ++ AR+I GG IHCITQ
Sbjct: 273 SYINHLVVNGGVIVCGFDDPH-DALARDILSSVYPGRRVVTVD-ARQIFARGGGIHCITQ 330
Query: 298 QQP 300
QP
Sbjct: 331 HQP 333
>gi|223937595|ref|ZP_03629498.1| Agmatine deiminase [bacterium Ellin514]
gi|223893758|gb|EEF60216.1| Agmatine deiminase [bacterium Ellin514]
Length = 337
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 153/349 (43%), Gaps = 73/349 (20%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAEWE H W WP R E + ++ D V+A++ + + E V + + E
Sbjct: 1 MPAEWETHVSTWFTWP-RPEGI-SFPDKYDTVPPVYAELIRHLVRVEEVNINVWNPEMEA 58
Query: 74 ------ARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
+ + P E + W RD GP +V + + + A +DW +N+
Sbjct: 59 WVKDLLRKEKTPLERVHFHYFPAYEPWCRDHGPIFLVREQNGQL-----ERAIVDWGYNA 113
Query: 127 WGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNK 186
WG Y + LD V + + RLP F +V+EGGSI V+G GT LTT+ CLLN
Sbjct: 114 WGN----KYPPFDLDDAVPQHVAKLRRLPLFSPGIVMEGGSIEVNGRGTVLTTDACLLNP 169
Query: 187 NRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG------------------EAKP 228
NRNPHL K QIE LK YLGV ++WL G+ G DG E P
Sbjct: 170 NRNPHLNKQQIEQYLKDYLGVTNVLWLGEGIVGDDTDGHIDDITRFVNPTTVVAVVEEDP 229
Query: 229 RLAGTRLAASYVN----FYIANGGIIT----PQFGDKKWDGE------------------ 262
+ L + +G ++ P G ++DG+
Sbjct: 230 KDENYELLQENLKRLRVMKDQDGKLLNVVELPMPGLVEYDGQRLPASYANFYIANQMVLV 289
Query: 263 ----------AVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
A+ +L + FP VVG++ + E++ G G+ HCI+QQ+PA
Sbjct: 290 PTYRHANDAKALAILQKCFPDRRVVGVD-STELIWGLGSFHCISQQEPA 337
>gi|169627691|ref|YP_001701340.1| peptidyl-arginine deiminase [Mycobacterium abscessus ATCC 19977]
gi|419717798|ref|ZP_14245167.1| peptidyl-arginine deiminase [Mycobacterium abscessus M94]
gi|420913248|ref|ZP_15376560.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0125-R]
gi|420914451|ref|ZP_15377757.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0125-S]
gi|420919566|ref|ZP_15382865.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0728-S]
gi|420925334|ref|ZP_15388623.1| putative agmatine deiminase [Mycobacterium abscessus 6G-1108]
gi|420964876|ref|ZP_15428093.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0810-R]
gi|420975684|ref|ZP_15438870.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0212]
gi|420981062|ref|ZP_15444235.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0728-R]
gi|421005762|ref|ZP_15468880.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0119-R]
gi|421011106|ref|ZP_15474205.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0122-R]
gi|421019600|ref|ZP_15482657.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0122-S]
gi|421021526|ref|ZP_15484578.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0731]
gi|421023811|ref|ZP_15486857.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0731]
gi|421027333|ref|ZP_15490372.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0930-R]
gi|421035067|ref|ZP_15498088.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0930-S]
gi|169239658|emb|CAM60686.1| Porphyromonas-type peptidyl-arginine deiminase [Mycobacterium
abscessus]
gi|382937346|gb|EIC61706.1| peptidyl-arginine deiminase [Mycobacterium abscessus M94]
gi|392115242|gb|EIU41011.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0125-R]
gi|392124525|gb|EIU50284.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0125-S]
gi|392135409|gb|EIU61149.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0728-S]
gi|392140991|gb|EIU66717.1| putative agmatine deiminase [Mycobacterium abscessus 6G-1108]
gi|392173629|gb|EIU99296.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0212]
gi|392176860|gb|EIV02518.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0728-R]
gi|392204554|gb|EIV30142.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0119-R]
gi|392208230|gb|EIV33807.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0122-S]
gi|392213017|gb|EIV38576.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0731]
gi|392213537|gb|EIV39093.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0122-R]
gi|392217555|gb|EIV43089.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0731]
gi|392228388|gb|EIV53901.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0930-S]
gi|392233293|gb|EIV58792.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0930-R]
gi|392258410|gb|EIV83856.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0810-R]
Length = 370
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 119/226 (52%), Gaps = 28/226 (12%)
Query: 14 MPAEWEPHSQCWMGWPVRYE----RLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
MP E EPH + WM + E RL+ Q+ +A AI++FEPV++
Sbjct: 43 MPDEGEPHLRTWMAFGASAEIWGKRLNR------KVQQNLGAIARAIAQFEPVSMLVRPE 96
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+ E AR I ++ +++N W RD+GP V N+S A +D+NFN WGG
Sbjct: 97 ETELARQLAGPGIELVPVALNDLWIRDSGPVYVHNESGR---------AAVDFNFNGWGG 147
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
++ D VA ++ +P +VLEGG+I VDG GT + TE C+LN NRN
Sbjct: 148 -----KQEHKSDAMVAAEVAKRAGVPTIHTELVLEGGAIEVDGRGTAIVTESCVLNDNRN 202
Query: 190 PHLTKGQIENELKAYLGVMKIIWLPRGLFGM-IHDGEAK--PRLAG 232
+KG++E EL+ LG+ K+IWLP G+ GM I DG R AG
Sbjct: 203 RGRSKGEVEAELRRLLGLHKVIWLP-GIAGMDITDGHTDFYARFAG 247
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
AA Y+NFY+ANGG+I PQFGD + D +A L + FP VV ++ GG IHC
Sbjct: 305 FAAGYINFYLANGGVIAPQFGDPQADTKAKSTLERLFPGRRVVQLDIDGIAAG-GGGIHC 363
Query: 295 ITQQQP 300
TQQ+P
Sbjct: 364 ATQQEP 369
>gi|422295001|gb|EKU22300.1| agmatine deiminase, partial [Nannochloropsis gaditana CCMP526]
Length = 258
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 102/176 (57%), Gaps = 13/176 (7%)
Query: 46 QRVFAKVATAISKF--EPVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVV 103
Q V+A +A AI + E VTV A WE AR+ L +RV+EM + +W RD+GPT VV
Sbjct: 1 QTVYAHIANAIQEHGSEQVTVGVRAEDWEEARALLHPGVRVVEMESDSAWARDSGPTFVV 60
Query: 104 NKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVL 163
+ +V G+DW G + C RD VARK+L E++ R+ +V+
Sbjct: 61 RDDGEE---EMREVRGVDWAM----GTEGPCGRDQ----LVARKVLEVEKIRRYAAPLVM 109
Query: 164 EGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
GG HVDGEGTCL TEE LL+ + P L K +E L+ YLGV ++IWL +G++G
Sbjct: 110 GGGCFHVDGEGTCLVTEESLLSPTQRPSLAKEAVEEVLRRYLGVERVIWLEKGVYG 165
>gi|323358295|ref|YP_004224691.1| peptidylarginine deiminase [Microbacterium testaceum StLB037]
gi|323274666|dbj|BAJ74811.1| peptidylarginine deiminase [Microbacterium testaceum StLB037]
Length = 344
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 144/350 (41%), Gaps = 73/350 (20%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MP+E P ++ WM +P L + + VA A+++FEPV + A+
Sbjct: 5 MPSETAPQTRTWMAFPAEGPTLGETDAEREAGYAAWTAVAHAVAEFEPVAMVVDPAELTR 64
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG-IDWNFNSWGGVDD 132
AR L +I + E ++ W RD GPT V++ + P V G + W FN WG D
Sbjct: 65 ARRMLSSDIEIFEAPVDEFWMRDAGPTFVLDP-------ERPGVLGAVAWTFNGWG---D 114
Query: 133 GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
+ +W + R + +V EGG IHVDG+GT TE L+ RNP+
Sbjct: 115 HWWGEWRKSAGLGRFVAEAAGAELVSSLLVNEGGGIHVDGDGTVFLTETVQLDPRRNPYA 174
Query: 193 TKGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIHDGEAKPR 229
+ ++E E+ +G +WLPRGL FG ++HD + P
Sbjct: 175 DRARVEAEMARTIGATHFVWLPRGLTRDYEDFGTSGHVDIVATMPSAGTVLLHD-QRNPA 233
Query: 230 LAGTRLAASYVNFYIANGGIITPQF---------------GDKKW--------------- 259
++A F+ F GD W
Sbjct: 234 HPDHAVSAELRAFFAEQTDAAGRPFTVRDLPAPDALRDADGDTDWSYVNHLVVNGGVIAC 293
Query: 260 -------DGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
DG A +L +A+P VV ++ ARE+ GG IHCITQQQP +
Sbjct: 294 GFDEPEADGRARGILEEAYPGRRVVTVD-ARELYARGGGIHCITQQQPEV 342
>gi|347529376|ref|YP_004836124.1| putative peptidylarginine deiminase [Sphingobium sp. SYK-6]
gi|345138058|dbj|BAK67667.1| putative peptidylarginine deiminase [Sphingobium sp. SYK-6]
Length = 327
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 153/340 (45%), Gaps = 69/340 (20%)
Query: 13 LMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKF-EPVTVCA-SAAQ 70
LMP EW P + W+G+P W AQ A A+A++ +PVT+ S A
Sbjct: 4 LMPPEWAPQERLWIGFPGDPAE---WPAALPAAQSQAAAFASAVADAGQPVTLLVRSEAD 60
Query: 71 WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
ARS + V + W RDTGP ++ + A + A D++FN WGG
Sbjct: 61 LATARSLAAPAVTVQHLPFGDVWLRDTGPLGILGPNGARALA--------DFDFNGWGGK 112
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
+R S D + ++ +T LP M+ EGG++ DG G +TTE+CLLN+NRNP
Sbjct: 113 ----FR-MSGDEDIGARLAATTGLPCRHVPMIFEGGAVDTDGTGLFVTTEQCLLNRNRNP 167
Query: 191 HLTKGQIENELKAYLGVMKIIWLPRGLF-------------------------------- 218
L + QIE L LG+ ++WL GL
Sbjct: 168 GLDRRQIETLLAGALGLSAMLWLGDGLVNDHTDGHVDNLARFVAPGVLAVPQATTPEDPN 227
Query: 219 -GMIHDGEAKPRLAGTRLA----------------ASYVNFYIANGGIITPQFGDKKWDG 261
+ D + R G +A ASY+NF I NG +I PQ+G DG
Sbjct: 228 TAIYADAAERARAFGLEIAPMPSVGRYEVNGAIVPASYMNFCITNGAVIVPQYGVAN-DG 286
Query: 262 EAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
A+ L+ FP +VG+ + I+ GGG+ HC++QQ PA
Sbjct: 287 AALDALAPFFPGRALVGLP-SDAILRGGGSFHCMSQQLPA 325
>gi|384248471|gb|EIE21955.1| hypothetical protein COCSUDRAFT_66758 [Coccomyxa subellipsoidea
C-169]
Length = 643
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 111/203 (54%), Gaps = 14/203 (6%)
Query: 26 MGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQ-WENARSQLPE--NI 82
MGWP + WR+ A + +A VA AIS+FE + + A+ + NAR L + N+
Sbjct: 1 MGWPESNDSKYLWREGGELAHQAYANVAKAISQFEQLFMIANPGKPAANARRVLSDSPNV 60
Query: 83 RVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDD------GCYR 136
V E+ +N W RD GP+ G VAG+ W+++ G +
Sbjct: 61 TVEEIPINDGWTRDWGPSCFARDVDGHRG-----VAGVHWDYDCHGAPNKIAQGRPAMMP 115
Query: 137 DWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQ 196
+W ++ R +L+T LP F + LEGGSIH DG GT + TEECLL+ +RNPHL K
Sbjct: 116 NWDKNVAAGRALLTTNGLPVFKAPLHLEGGSIHSDGTGTMVVTEECLLDPSRNPHLDKAG 175
Query: 197 IENELKAYLGVMKIIWLPRGLFG 219
IEN LK YLG+ KIIWL RG+ G
Sbjct: 176 IENILKEYLGLEKIIWLWRGMEG 198
>gi|397734473|ref|ZP_10501179.1| porphyromonas-type peptidyl-arginine deiminase family protein
[Rhodococcus sp. JVH1]
gi|396929596|gb|EJI96799.1| porphyromonas-type peptidyl-arginine deiminase family protein
[Rhodococcus sp. JVH1]
Length = 341
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+ MP+E EP + WM +P + DDA A+ + VA AI +FEPVT+ A
Sbjct: 3 WRMPSETEPQERVWMAFPPLGASMTATEDDAHEARTAWTAVAHAIVEFEPVTMVVDPADR 62
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
+ AR L ++ V+E ++ +W RD GPT V+++ ++ +DW FN WG +
Sbjct: 63 DVARQYLSADVDVVEAPLDDAWMRDIGPTFVLDEDD--------RLGAVDWTFNGWGQQE 114
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ W D + + P SMV EGG I VDG GT L TE L+ RNP
Sbjct: 115 ---WATWDRDRSIGGAVTRWSGAQPVPSSMVNEGGGIQVDGRGTVLVTETVQLDPLRNPG 171
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGL 217
L +E EL +G ++WLPRGL
Sbjct: 172 LDAAGVETELARTIGAEHVVWLPRGL 197
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N + NGG+I F D D A +LS +P VV ++ AR+I GG IHCITQ
Sbjct: 277 SYINHLVVNGGVIACGFDDPH-DALARDILSSVYPGRRVVTVD-ARQIFARGGGIHCITQ 334
Query: 298 QQP 300
QP
Sbjct: 335 HQP 337
>gi|443478450|ref|ZP_21068202.1| agmatine deiminase [Pseudanabaena biceps PCC 7429]
gi|443016259|gb|ELS30961.1| agmatine deiminase [Pseudanabaena biceps PCC 7429]
Length = 336
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TP GY PAEW+PH+ CW+ +P D W + Q F +A AI++ E + +
Sbjct: 3 TPKNLGYTQPAEWQPHNACWLAFP---SHRDLWLEALDIVQAEFVALAKAIARSEQLEIL 59
Query: 66 A---SAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+AA + LP +R ++ W RD P + N A K+ + +
Sbjct: 60 VLEETAALAKELLVGLP--VRFHQIPFGDIWMRDITPIYIKNA--------AGKLGALHF 109
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
+N WGG D +VA +IL T LP+F VLEGG+I VDGEGTCLTT++C
Sbjct: 110 QWNGWGG-----KYMLEHDDRVADRILQTLDLPKFEFDWVLEGGAIEVDGEGTCLTTKQC 164
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNP + IE LK LGV KI+W+ GL DG
Sbjct: 165 LLNPNRNPQMDHTAIEEGLKNALGVEKILWIEEGLLNDHTDG 206
>gi|154150155|ref|YP_001403773.1| peptidyl-arginine deiminase [Methanoregula boonei 6A8]
gi|153998707|gb|ABS55130.1| Porphyromonas-type peptidyl-arginine deiminase [Methanoregula
boonei 6A8]
Length = 640
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 115/227 (50%), Gaps = 24/227 (10%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWP---VRYERLDNWRDDALHAQRVFAKVATA--ISKFE 60
TP GY MPAEWEPH W+ WP + LD + + R A +A + + F
Sbjct: 299 TPRKLGYSMPAEWEPHEAVWLSWPHNKFTFPDLDRVEEAYI---RFIAGIAPSERVELFV 355
Query: 61 PVTVCAS--AAQWENARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKV 117
P + A+ A L +R I+ + W RD GPT VVN + S
Sbjct: 356 PTPMANRMVKARLRTAGVDLSRVTLRTIQYA--DVWIRDYGPTFVVNPALKRS------- 406
Query: 118 AGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCL 177
A + W FN+WG Y D D V + LP F ++LEGGSI +G GT L
Sbjct: 407 AMVHWRFNAWGEK----YPDQIADGHVPDDMNRWLGLPVFTPGIILEGGSIDTNGRGTVL 462
Query: 178 TTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
TT+ CLLN+NRNP LTK +IE LK YLGV+KI+WL RG+ G DG
Sbjct: 463 TTQACLLNRNRNPELTKDEIEEYLKEYLGVVKILWLNRGVAGDDTDG 509
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
R ASY NFYI N +I P F D + D EA+R+L + FP V+G+ AR +V G G H
Sbjct: 574 RCPASYTNFYIGNTVVIVPVFDDPQ-DKEALRILQELFPDRTVMGVN-ARAMVEGYGTFH 631
Query: 294 CITQQQP 300
C TQQQP
Sbjct: 632 CATQQQP 638
>gi|111021357|ref|YP_704329.1| agmatine deiminase [Rhodococcus jostii RHA1]
gi|110820887|gb|ABG96171.1| possible agmatine deiminase [Rhodococcus jostii RHA1]
Length = 337
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 103/204 (50%), Gaps = 11/204 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MP+E EP + WM +P + DDA A+ + VA AI +FEPVT+ A +
Sbjct: 1 MPSETEPQERVWMAFPPLGASMTATEDDAHEARTAWTAVAHAIVEFEPVTMVVDPADRDV 60
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
AR L ++ V+E ++ +W RD GPT V+++ ++ +DW FN WG +
Sbjct: 61 ARQYLSADVDVVEAPLDDAWMRDIGPTFVLDEDD--------RLGAVDWTFNGWGQQE-- 110
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ W D + + P SMV EGG I VDG GT L TE L+ RNP L
Sbjct: 111 -WATWDRDRSIGGAVTRWSGAQPVPSSMVNEGGGIQVDGRGTVLVTETVQLDPLRNPGLD 169
Query: 194 KGQIENELKAYLGVMKIIWLPRGL 217
+E EL +G ++WLPRGL
Sbjct: 170 AAGVEAELARTIGAEHVVWLPRGL 193
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N + NGG+I F D D A +LS +P VV ++ AR+I GG IHCITQ
Sbjct: 273 SYINHLVVNGGVIACGFDDPH-DVLARDILSSVYPGRRVVTVD-ARQIFARGGGIHCITQ 330
Query: 298 QQP 300
QP
Sbjct: 331 HQP 333
>gi|428219303|ref|YP_007103768.1| agmatine deiminase [Pseudanabaena sp. PCC 7367]
gi|427991085|gb|AFY71340.1| agmatine deiminase [Pseudanabaena sp. PCC 7367]
Length = 363
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 119/237 (50%), Gaps = 26/237 (10%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
+P GY PAEWEPH+ CW+ W E W A+R F + AI+ E + +
Sbjct: 3 SPQELGYRQPAEWEPHAACWVAWAHDAE---EWAGQIEAARREFVAMCEAIAPTEKLEIL 59
Query: 66 ASAAQWENA-RSQLPENI-----RVIEMSMNGSWFRDTGPTIVVNKS------------S 107
+ A R L + R + W RD P V N++ +
Sbjct: 60 VMPGEATGAARLALGHLLDQGLARFHAIPYGDIWLRDIAPIFVSNRTKHTKQLDQLEQLA 119
Query: 108 ASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGS 167
++ + ++A +D+ +N WG + ++ D QVA I S+ LP F +LEGG+
Sbjct: 120 STEPKKQTQLAALDFAWNGWG--EKYLFKH---DAQVAEAIASSLDLPIFKFPWILEGGA 174
Query: 168 IHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
+ VDG+GTCLTT++CLLN NRNPHL + +IE LK LGV KI+WL RGL DG
Sbjct: 175 VEVDGQGTCLTTKQCLLNPNRNPHLPQSEIETRLKQALGVNKILWLDRGLKNDHTDG 231
>gi|385652366|ref|ZP_10046919.1| agmatine deiminase [Leucobacter chromiiresistens JG 31]
Length = 341
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 144/346 (41%), Gaps = 72/346 (20%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MP E + W+ WP L + +A A+ +A VA A S+ EPVTV +
Sbjct: 6 MPIEGHEQERLWLAWPTSGYTLGDTEAEAEEARTTWAAVANAASEHEPVTVVVNPGDEAI 65
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
A L I I +N +W RD GP+ V+ ++ +++ FN WGG +
Sbjct: 66 AARYLSAQIERITAPLNDAWMRDIGPSFVIGDDG--------RLGAVNFVFNGWGGQE-- 115
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
+ W+ D + R + M EGG I VDG G + T+ L+ RNP T
Sbjct: 116 -WAQWNHDQHIGRIVAEAAGAELIDSEMTNEGGGIQVDGTGRVVITKTVQLDPGRNPGWT 174
Query: 194 KGQIENELKAYLGVMKIIWLPRGL------FG-----------------MIH--DGEAKP 228
+ Q+E EL +G +WLPRGL FG ++H D E+ P
Sbjct: 175 QEQVEAELARTIGATSALWLPRGLTRDHDTFGTRGHSDILAAFTSPDLLLMHRQDAESHP 234
Query: 229 RLAGTR----LAASY------------------------------VNFYIANGGIITPQF 254
R +A Y +N + NG ++ F
Sbjct: 235 DHVIARTNRDVADRYRDDTSANFEIIDLPAPETLRDDEGFVDYSYINHVVINGAVLACAF 294
Query: 255 GDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
D D A+ +L +A+P EV+G++ AR + GG IHCITQQQP
Sbjct: 295 DDPA-DDRALAILREAYPGREVIGLD-ARPLFARGGGIHCITQQQP 338
>gi|302532790|ref|ZP_07285132.1| agmatine deiminase [Streptomyces sp. C]
gi|302441685|gb|EFL13501.1| agmatine deiminase [Streptomyces sp. C]
Length = 319
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 107/194 (55%), Gaps = 14/194 (7%)
Query: 26 MGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVI 85
M WP ++R W Q A +A AI++FE V + A Q AR++ ++ V
Sbjct: 1 MAWP--WDRNVGWGALLDDVQGEVAGIARAIARFETVVMFAEPGQAAQARARCGGSVTVT 58
Query: 86 EMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDLQVA 145
E +N W RDTGP + V+ + + S AG+D+ FN WGG + D +
Sbjct: 59 EYPVNDCWARDTGPVLTVDDARSRS-------AGLDFGFNGWGG-----KYPYDKDDFLP 106
Query: 146 RKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYL 205
+ + +PR P +MVLEGGS+ DG+GT +TTEECLLN NRNP +T+ QIE L A
Sbjct: 107 VGVCTYLGVPRQPVAMVLEGGSVITDGQGTLITTEECLLNPNRNPGMTRAQIEAALLASY 166
Query: 206 GVMKIIWLPRGLFG 219
G K++WLP GL G
Sbjct: 167 GASKVVWLPYGLAG 180
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY N+Y +G ++ P G+ D A+ + FP +VVG AR + GGG +HC+TQ
Sbjct: 256 SYTNYYETSGNVVVPTAGEPA-DAAALAQFAALFPGRQVVGAP-ARTLAWGGGGVHCVTQ 313
Query: 298 QQPAI 302
P +
Sbjct: 314 HVPRV 318
>gi|346224201|ref|ZP_08845343.1| agmatine deiminase [Anaerophaga thermohalophila DSM 12881]
gi|346226260|ref|ZP_08847402.1| agmatine deiminase [Anaerophaga thermohalophila DSM 12881]
Length = 348
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 146/345 (42%), Gaps = 71/345 (20%)
Query: 13 LMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASA-AQW 71
++PAEWE + WP +E D W + F K+ I++FE V + Q
Sbjct: 10 ILPAEWESQDAVLLAWP--HEETD-WEPMLQETRDCFRKIIDTITRFEDVVLLVDDNDQN 66
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
++R + PE ++++++ +N +W RD GP +V + K +D+ FN WG
Sbjct: 67 PSSRFRFPERLQIVKVPVNDTWARDFGPLLV---------KENRKYIAVDFKFNGWGLKF 117
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ +I S + + + VLEGGSI DG+GT LTT CLL+ NRN
Sbjct: 118 AADKDNLITQRLFENRIFSQDVVRENRLNFVLEGGSIESDGKGTVLTTSRCLLSPNRNGR 177
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGL---------------------------------- 217
+K +IE+ LK +LG I+WL G
Sbjct: 178 YSKNEIEDRLKQFLGANNILWLENGYLAGDDTDSHIDTLARFCDPGTIVYIKTDNPEDEH 237
Query: 218 FGMIHDGEAKPRLAGTRLAASY----------------------VNFYIANGGIITPQFG 255
F ++ E + R T SY NF I N ++ P +
Sbjct: 238 FEALNKMENQLRKFKTTEGKSYNLIPLPMADPVYHNNQCLPATYANFLIINHAVLVPFYN 297
Query: 256 DKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
K D EA ++ + FP EV+GI+ R ++ G++HC+T Q P
Sbjct: 298 SPK-DIEAKKIFEKIFPNREVIGID-CRPLIKQNGSLHCVTMQLP 340
>gi|193213244|ref|YP_001999197.1| Agmatine deiminase [Chlorobaculum parvum NCIB 8327]
gi|193086721|gb|ACF11997.1| Agmatine deiminase [Chlorobaculum parvum NCIB 8327]
Length = 347
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 114/223 (51%), Gaps = 22/223 (9%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTV-CASAAQ 70
Y MP EW PH+ W+ WP +L++W VFA++A +S+ E V + A
Sbjct: 6 YFMPPEWAPHASTWLSWP---HKLESWPGKFEPVPAVFAELAYQLSRSETVNINVLDDAM 62
Query: 71 WENARSQLPEN---------IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
AR+ L E I + N +W RD GP V+ G + KV ++
Sbjct: 63 EAQARALLKERDPEEQYADRIVFHRIPTNDAWCRDHGPNYVIR----IRGEERDKVI-MN 117
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
W +N+WGG Y + D V ++ + LP MVLEGG+I V+G G LTTE
Sbjct: 118 WEYNAWGGK----YEPYDDDNAVPERVAKIQGLPMVSTGMVLEGGAIDVNGAGLLLTTEA 173
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
CLLN NRNP L+K +IE +L YLG+ K++WL G+ G DG
Sbjct: 174 CLLNPNRNPSLSKAEIEAQLSRYLGIRKVLWLGDGIAGDDTDG 216
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 232 GTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGN 291
G RL ASY NFYIAN ++ P + + D +A+ +L + F +V+GI+ +++ G G
Sbjct: 279 GERLPASYANFYIANSVVLVPTYRCSR-DQQAIDILQEYFLDRKVIGID-CSDLIWGLGA 336
Query: 292 IHCITQQQPA 301
IHC+T ++PA
Sbjct: 337 IHCVTHEEPA 346
>gi|419712178|ref|ZP_14239640.1| peptidyl-arginine deiminase [Mycobacterium abscessus M93]
gi|382938223|gb|EIC62563.1| peptidyl-arginine deiminase [Mycobacterium abscessus M93]
Length = 370
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 118/226 (52%), Gaps = 28/226 (12%)
Query: 14 MPAEWEPHSQCWMGWPVRYE----RLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
MP E EPH + WM + E RL+ Q+ +A AI++FEPV++
Sbjct: 43 MPDEGEPHLRTWMAFGASAEIWGKRLNR------KVQQNLGAIARAIAQFEPVSMLVRPE 96
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+ E AR I ++ +++N W RD+GP V N+S A +D+NFN WGG
Sbjct: 97 ETELARQLAGPGIELVPVALNDLWIRDSGPVYVHNESGR---------AAVDFNFNGWGG 147
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
++ D VA ++ +P +VLEGG+I VDG GT + TE C+LN NRN
Sbjct: 148 -----KQEHKSDAMVAAEVAKRTGVPTIHTELVLEGGAIEVDGRGTAIVTESCVLNDNRN 202
Query: 190 PHLTKGQIENELKAYLGVMKIIWLPRGLFGM-IHDGEAK--PRLAG 232
+K ++E EL+ LG+ K+IWLP G+ GM I DG R AG
Sbjct: 203 RGRSKSEVEAELRRLLGLHKVIWLP-GIAGMDITDGHTDFYARFAG 247
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
AA Y+NFY+ANGG+I PQFGD + D +A L + FP VV ++ I GGG+IHC
Sbjct: 305 FAAGYINFYLANGGVIAPQFGDPQADTKAKSTLERLFPGRRVVQLD-IDGIAAGGGSIHC 363
Query: 295 ITQQQP 300
TQQ+P
Sbjct: 364 ATQQEP 369
>gi|395645637|ref|ZP_10433497.1| Porphyromonas-type peptidyl-arginine deiminase [Methanofollis
liminatans DSM 4140]
gi|395442377|gb|EJG07134.1| Porphyromonas-type peptidyl-arginine deiminase [Methanofollis
liminatans DSM 4140]
Length = 643
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 114/228 (50%), Gaps = 26/228 (11%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFA-----KVATAISKFE 60
TP GY MPAEWEPH W+ WP + + R+ A ++ + E
Sbjct: 302 TPKKCGYHMPAEWEPHDAIWLSWPHDPDTFPDLEAVEASYLRIVAALHHDEIVNLLVTDE 361
Query: 61 P----VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPK 116
P VT +AA + AR IR WFRD GP VV+++ +
Sbjct: 362 PMQGRVTDLFTAAGLDLAR------IRFHRADYADVWFRDYGPVFVVDRAGGA------- 408
Query: 117 VAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTC 176
+A +DW FN+WGG Y + D + + LP F +VLEGGSI V+G+GT
Sbjct: 409 LAMVDWIFNAWGGK----YEELMRDSGIPSTLNHWLHLPIFSPGIVLEGGSIEVNGKGTV 464
Query: 177 LTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
+TT +CLLN NRNP L++ +IE LK YLG +IWL +G+ G DG
Sbjct: 465 ITTRQCLLNPNRNPDLSQEEIEGHLKEYLGASHVIWLNQGIAGDDTDG 512
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 233 TRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNI 292
RL ASY NFYI N ++ P FGD+ D A+ +L FP +VVGI+ R +V G G I
Sbjct: 576 VRLPASYTNFYIGNRTVLVPVFGDEN-DERALAILKGLFPDRDVVGID-CRAMVFGLGTI 633
Query: 293 HCITQQQPAI 302
HCI+QQQP++
Sbjct: 634 HCISQQQPSV 643
>gi|393723167|ref|ZP_10343094.1| agmatine deiminase [Sphingomonas sp. PAMC 26605]
Length = 324
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 145/339 (42%), Gaps = 69/339 (20%)
Query: 13 LMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWE 72
L PAEW PH+ W+G+P E ++ D A F + A + E V +
Sbjct: 5 LPPAEWAPHAAVWIGFPSHPELWEDDLDTARDEVAAFGRAVHAEGRGEQVIFVVADEDAA 64
Query: 73 NARSQLPENIRVIEMSMNGS-WFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
+A L + I + G W RDTGP ++ + S+ + + FN WGG
Sbjct: 65 DAARDLAGDFAEIVVEPFGDIWLRDTGPIVLSDHSARA------------FRFNGWGG-- 110
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
D D V ++ +++ LP VLEGG+I DG G +TTE+CLLN NRNP
Sbjct: 111 ---KYDLPGDDDVGLRLAASKLLPVERCDWVLEGGAIDGDGTGLVVTTEQCLLNANRNPA 167
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGE-------------AKPRLAGTR---- 234
L+K +IE L LG +I+WL GL DG A P+ A
Sbjct: 168 LSKAEIEQRLHDDLGFDQILWLGDGLMHDHTDGHVDNLARFVAPGVLAIPQAAENDPNWL 227
Query: 235 --------------------------------LAASYVNFYIANGGIITPQFGDKKWDGE 262
+ ASY+NFYI N ++ P +G D
Sbjct: 228 VYQHAASAAEAMAGVTVVRIPSPGRVLRDEEIVPASYMNFYIGNAAVVVPLYGAPN-DES 286
Query: 263 AVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
AV + FP VG+ RA I+ GGG+ HCI+QQ PA
Sbjct: 287 AVAAVQALFPGRTAVGL-RADAILTGGGSFHCISQQVPA 324
>gi|386382960|ref|ZP_10068513.1| putative agmatine deiminase [Streptomyces tsukubaensis NRRL18488]
gi|385669581|gb|EIF92771.1| putative agmatine deiminase [Streptomyces tsukubaensis NRRL18488]
Length = 346
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 111/206 (53%), Gaps = 13/206 (6%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+ MP EW PH + WM WP + D+ ++R +A VA A+ +FEPVT+ Q
Sbjct: 2 FRMPPEWAPHERTWMAWPGPNPTFSD-GDELDGSRRAWAAVARAVRRFEPVTMVVGPGQS 60
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
AR+ L ++ ++E ++ +W RD GPT V + + ++A +DW FN WG +
Sbjct: 61 AGARALLGPDVDLVERELDDAWMRDIGPTFVSDGT---------RLAAVDWVFNGWGAQE 111
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ W D ++AR + +P +V EGG IHVDGEGT L TE L RNP
Sbjct: 112 ---WARWEHDAKIARAVADLAGVPVHGSPLVNEGGGIHVDGEGTVLLTETVQLGPERNPG 168
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGL 217
T+ + E E+ A LG K IWLPRGL
Sbjct: 169 WTRERAEAEIHARLGTTKAIWLPRGL 194
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N Y+ NGG++ F D + D EA + + +P EVV ++ AR I GGG IHCITQ
Sbjct: 277 SYINHYVCNGGVVLCAFDDPR-DEEAAAIFRRLYPDREVVLVD-ARTIFAGGGGIHCITQ 334
Query: 298 QQPAI 302
QQPA+
Sbjct: 335 QQPAV 339
>gi|260754037|ref|YP_003226930.1| agmatine deiminase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|258553400|gb|ACV76346.1| Agmatine deiminase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 326
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 144/343 (41%), Gaps = 72/343 (20%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAI---SKFEPVTVCASA 68
Y PAEW PH W+G+P W +D AQ A A+ + E V + A+
Sbjct: 3 YHQPAEWMPHDAVWIGFPSDASL---WLEDLEPAQAEVVAFAKAVAAQGEGEKVYLVAAH 59
Query: 69 AQW-ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSW 127
+ + A + +I VI W RD P V + K A + FN W
Sbjct: 60 KEAADQAVKMVGSDIEVICHPFGDIWLRDNAPLFV---------KEGDKKALALFRFNGW 110
Query: 128 GGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
GG + D + R + LP + VLEGGSI DG G +TTEECLLN N
Sbjct: 111 GG-----KYNLDGDQTIGRDLAKDTALPVLEKNWVLEGGSIDGDGHGLVVTTEECLLNPN 165
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAK--PRLAG------------- 232
RNP L++G I L+ LG +++WL +GL DG R G
Sbjct: 166 RNPELSRGDIARHLRNDLGYDRVLWLRKGLHNDHTDGHVDNLARFVGENHLVVPIATDQD 225
Query: 233 ---------------------TRL-------------AASYVNFYIANGGIITPQFGDKK 258
TRL ASY+NFYI N ++ P +G K
Sbjct: 226 DPNREVYDQAAQIATEFGVKVTRLPSTGRITIDDEVVPASYMNFYIGNKVVVVPVYGAKN 285
Query: 259 WDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
DG V+ L FP +VV + A I+ GGG+ HCI+QQ PA
Sbjct: 286 -DGAIVQALEALFPSRKVVALP-AGHILTGGGSFHCISQQWPA 326
>gi|254283893|ref|ZP_04958861.1| agmatine deiminase [gamma proteobacterium NOR51-B]
gi|219680096|gb|EED36445.1| agmatine deiminase [gamma proteobacterium NOR51-B]
Length = 330
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MP EW PH+ WM +P E AQ ++ VA I++ EP+ + S
Sbjct: 1 MPPEWAPHTATWMSFP--QESYPGTGVSTAEAQAAWSAVANTIAEHEPLHLLVSPEDAAI 58
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
A + I + ++ +W RD+GPT V ++ GIDWNFN WG D
Sbjct: 59 AAKLVSGAIHRHDCPLDDAWLRDSGPTFVEVDG---------ELRGIDWNFNGWG---DH 106
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
DW D ++A +I + + R + EGG IHVDG G L TE ++ RNP +
Sbjct: 107 TAFDWQRDNELAGRICAIAGIERESSPLTNEGGGIHVDGTGRVLLTETVQRDEGRNPGWS 166
Query: 194 KGQIENELKAYLGVMKIIWLPRGLFG-----------------------MIH-------- 222
+ +E E+ LG +WLPRGL+ ++H
Sbjct: 167 REDVEEEVHQRLGTDHALWLPRGLYRDYFDHGTRGHVDIVACFTPAGQVLLHWQTDTAHP 226
Query: 223 ---------DGEAKPRLAGTRLAA--------SYVNFYIAN-----GGIITPQFGDKKWD 260
D + L L A ++V++ N G +I P F D D
Sbjct: 227 DAKICREVRDALEQADLTVVELPAPKTLRDNINWVDYSYINHYVCNGAVICPSFDDPN-D 285
Query: 261 GEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
G +LS+ +P E+ ++ AR I GG IHCITQQQPA
Sbjct: 286 GAVQEILSEIYPGREIRPVD-ARVIFAMGGGIHCITQQQPA 325
>gi|432342132|ref|ZP_19591433.1| agmatine deiminase [Rhodococcus wratislaviensis IFP 2016]
gi|430772840|gb|ELB88567.1| agmatine deiminase [Rhodococcus wratislaviensis IFP 2016]
Length = 341
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+ MP+E EP + WM +P + DDA A+ + VA I++FEPVT+ A
Sbjct: 3 WRMPSETEPQERVWMAFPPLGASMTATADDAHEARTAWTAVAHTIAEFEPVTMVVDPADR 62
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
+ AR L +I V+E ++ +W RD GPT V+++ ++ +DW FN WG +
Sbjct: 63 DVARQYLSADIDVVEAPLDDAWMRDIGPTFVLDEDD--------RLGAVDWTFNGWGQQE 114
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ W D + + P +MV EGG I VDG GT L TE L+ RNP
Sbjct: 115 ---WATWDRDRSIGAAVTRWSGARPVPSTMVNEGGGIQVDGRGTVLVTETVQLDPLRNPG 171
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGL 217
L +E EL +G ++WLPRGL
Sbjct: 172 LDAAGVEAELARTIGAEHVVWLPRGL 197
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N + GG+I F D D A +LS +P VV ++ AR+I GG IHCITQ
Sbjct: 277 SYINHLVVTGGVIACGFDDPH-DALARDILSSVYPGRRVVTVD-ARQIFARGGGIHCITQ 334
Query: 298 QQP 300
QP
Sbjct: 335 HQP 337
>gi|451336826|ref|ZP_21907378.1| Agmatine deiminase [Amycolatopsis azurea DSM 43854]
gi|449420475|gb|EMD25951.1| Agmatine deiminase [Amycolatopsis azurea DSM 43854]
Length = 387
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 142/347 (40%), Gaps = 76/347 (21%)
Query: 17 EWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARS 76
EWE H++ ++ WP W +D + A +A AI+ FEPV + A E A+
Sbjct: 58 EWESHARTYLSWPASKSI---WAEDLPAVREEIAGLAKAIAGFEPVVLLARPEHAEAAQQ 114
Query: 77 QLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYR 136
+ + V+ + ++ W RDT P V +A KV G+D+NF+ WGG + +
Sbjct: 115 ACGDTVEVVPIPVDDLWARDTVPVFV---------EEAGKVGGVDFNFSGWGGKQNPHDK 165
Query: 137 DWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQ 196
D + VAR +L L R + EGGS DG GT + TE L+N NRN ++ +
Sbjct: 166 DKA----VARAVLGKYGLARTETWITAEGGSFETDGAGTLMVTESSLVNDNRNKGKSRQE 221
Query: 197 I---------------------ENELKAYLGVMKIIWLP--------------------- 214
I E+ A++ + P
Sbjct: 222 IEDELKKVLGVRKVIWFAGVRGEDITDAHVDCLARFTSPGVVLLDKAAPGTPPDSWSRAA 281
Query: 215 ---RGLFGMIHDGEAKPRLA--------------GTRLAASYVNFYIANGGIITPQFGDK 257
R + D + KP G SY NFY+AN + P+FGD
Sbjct: 282 DQARSVLASATDADGKPFKVIDLVQPDPEKVEGYGEDSVISYANFYVANKSVFVPKFGDA 341
Query: 258 KWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIPT 304
+ D A +VL FP E+V + + I GGG IHC T QP P+
Sbjct: 342 EADERAQQVLRDQFPGREIVPV-KISTIASGGGGIHCSTHDQPGQPS 387
>gi|419966720|ref|ZP_14482638.1| agmatine deiminase [Rhodococcus opacus M213]
gi|414567829|gb|EKT78604.1| agmatine deiminase [Rhodococcus opacus M213]
Length = 341
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+ MP+E EP + WM +P + DDA A+ + VA I++FEPVT+ A
Sbjct: 3 WRMPSETEPQERVWMAFPPLGASMTATADDAHEARTAWTAVAHTIAEFEPVTMVVDPADR 62
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
+ AR L +I V+E ++ +W RD GPT V+++ ++ +DW FN WG +
Sbjct: 63 DVARQYLSADIDVVEAPLDDAWMRDIGPTFVLDEDD--------RLGAVDWTFNGWGQQE 114
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ W D + + P +MV EGG I VDG GT L TE L+ RNP
Sbjct: 115 ---WATWDRDRSIGAAVTRWSGARPVPSTMVNEGGGIQVDGRGTVLVTETVQLDPLRNPG 171
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGL 217
L +E EL +G ++WLPRGL
Sbjct: 172 LDAAGVEAELARTIGAEHVVWLPRGL 197
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N + NGG+I F D D A +LS +P VV ++ AR+I GG IHCITQ
Sbjct: 277 SYINHLVVNGGVIACGFDDPH-DALARDILSSVYPGRRVVTVD-ARQIFARGGGIHCITQ 334
Query: 298 QQP 300
QP
Sbjct: 335 HQP 337
>gi|384107195|ref|ZP_10008096.1| agmatine deiminase [Rhodococcus imtechensis RKJ300]
gi|383832584|gb|EID72055.1| agmatine deiminase [Rhodococcus imtechensis RKJ300]
Length = 341
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+ MP+E EP + WM +P + DDA A+ + VA I++FEPVT+ A
Sbjct: 3 WRMPSETEPQERVWMAFPPLGASMTATADDAHEARTAWTAVAHTIAEFEPVTMVVDPADR 62
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
+ AR L +I V+E ++ +W RD GPT V+++ ++ +DW FN WG +
Sbjct: 63 DVARQYLSADIDVVEAPLDDAWMRDIGPTFVLDEDD--------RLGAVDWTFNGWGQQE 114
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ W D + + P +MV EGG I VDG GT L TE L+ RNP
Sbjct: 115 ---WATWDRDRSIGAAVTRWSGARPVPSTMVNEGGGIQVDGRGTVLVTETVQLDPLRNPG 171
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGL 217
L +E EL +G ++WLPRGL
Sbjct: 172 LDAAGVEAELARTIGAEHVVWLPRGL 197
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N + NGG+I F D D A +LS +P VV ++ AR+I GG IHCITQ
Sbjct: 277 SYINHLVVNGGVIACGFDDPH-DALARDILSSVYPGRRVVTVD-ARQIFARGGGIHCITQ 334
Query: 298 QQP 300
QP
Sbjct: 335 HQP 337
>gi|226363700|ref|YP_002781482.1| hypothetical protein ROP_42900 [Rhodococcus opacus B4]
gi|226242189|dbj|BAH52537.1| hypothetical protein [Rhodococcus opacus B4]
Length = 341
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 123/264 (46%), Gaps = 23/264 (8%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+ MP+E EP + WM +P + DDA A+ + VA AI+ FEPVT+ A
Sbjct: 3 WRMPSETEPQERVWMAFPPLGASMTATADDAHEARTAWTAVAHAIADFEPVTMVVDPADR 62
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
+ A L +I V+E ++ +W RD GPT V+++ ++ +DW FN WG +
Sbjct: 63 DVAWQYLARDIDVVEAPLDDAWMRDIGPTFVLDEED--------RLGAVDWTFNGWGQQE 114
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ W D + + P SMV EGG I VDG GT L TE L+ RNP
Sbjct: 115 ---WATWEHDRSIGAAVTRWSGARPVPSSMVNEGGGIQVDGHGTVLVTETVQLDPLRNPD 171
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIIT 251
L +E EL +G ++WLPRGL D E GT+ V A G ++
Sbjct: 172 LDAADVEAELARTIGAEHVVWLPRGL---TRDSEK----FGTKGHVDIVAALPAPGVVLV 224
Query: 252 -----PQFGDKKWDGEAVRVLSQA 270
P D + E ++VLS +
Sbjct: 225 HCQRDPSHPDHEVTAEILKVLSDS 248
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
SY+N + NGG+I F D D A +LS +P VV ++ AR+I GG IHCITQ
Sbjct: 277 SYINHLVVNGGVIACGFNDPH-DALARDILSSVYPGRRVVTVD-ARQIFARGGGIHCITQ 334
Query: 298 QQP 300
QP
Sbjct: 335 HQP 337
>gi|85375297|ref|YP_459359.1| peptidylarginine deiminase [Erythrobacter litoralis HTCC2594]
gi|84788380|gb|ABC64562.1| peptidylarginine deiminase [Erythrobacter litoralis HTCC2594]
Length = 323
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 143/343 (41%), Gaps = 73/343 (21%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKF--EPVTVCASAAQW 71
MP EW P W+G+P E W D AQ A A A+++ + + AA
Sbjct: 1 MPPEWAPQDWLWIGFPHLAEE---WPDHLERAQEQIAVFANAVTESGQQVRLLVRDAANE 57
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
A+ + ++++ W RDTGP + + S+ G FN WGG
Sbjct: 58 ARAQELVSADVKLERRVYGDIWLRDTGPLVRGDGSALRCG------------FNGWGG-- 103
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ D + ++ LP F VLEGG+I DG G +TTE+CLLN NRNPH
Sbjct: 104 ---KYEMPGDEAIGAELARDAGLPLFTRDWVLEGGAIDGDGTGLVVTTEQCLLNPNRNPH 160
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGLF--------------------------------- 218
+ +G IE L LG +++WL GL
Sbjct: 161 MDRGDIEAALCRDLGFDRVLWLGDGLLNDHTDGHVDNLARFFAPNRLCLPRANGPDDPNA 220
Query: 219 GMIHDGEAKPRLAGTRLA----------------ASYVNFYIANGGIITPQFGDKKWDGE 262
+ D +A+ G +A ASYVNF I ++ P FG + D E
Sbjct: 221 AIYADAKARAEAIGVEVAEIPSPGRIERDGKVEPASYVNFAITTFLVVVPTFGSPQ-DEE 279
Query: 263 AVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIPTN 305
V ++ FP E VG+ A ++ GGG HC +QQ+P + T+
Sbjct: 280 GVAAIAGLFPDRETVGLP-ADAVLAGGGGFHCASQQKPLLDTD 321
>gi|359404143|ref|ZP_09197007.1| hypothetical protein HMPREF0673_00208 [Prevotella stercorea DSM
18206]
gi|357560622|gb|EHJ41992.1| hypothetical protein HMPREF0673_00208 [Prevotella stercorea DSM
18206]
Length = 378
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 161/376 (42%), Gaps = 95/376 (25%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCAS---- 67
Y++PAEW + + WP +E D W F ++A A++ +EP+ + A
Sbjct: 6 YILPAEWHRQACVQLTWP--HEDTD-WLPYLDDITETFVQIAKAVAHYEPLVIAAKHPDA 62
Query: 68 --AAQWENARSQLPENIRVIEMSMNGSWFRDTG-----PTIVVNK-------SSASSGAQ 113
A E+ ++ EN+R+ E N +W RD PT+ N SA+ Q
Sbjct: 63 VRAELEESLSAEEMENVRIYECDNNDTWARDHAFITLIPTVEGNDIHIEGAAVSAAPTEQ 122
Query: 114 APKVAG---------IDWNFNSWG---GVDDGCYRDWSLDLQVARKILSTERLPRFPHSM 161
+ G +D+ FN WG D + +L AR + ER+
Sbjct: 123 TVRDYGKNAVASCLLLDFRFNGWGKKFAADKDNLINRTL---YARGVFGGERVDY--DDF 177
Query: 162 VLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG-LFGM 220
VLEGGSI DG GT LTT CL+ NRN +T+ ++E LK L KI+W G L G
Sbjct: 178 VLEGGSIESDGRGTVLTTSVCLMAPNRNQPMTQAEVEQVLKERLCARKIVWFDHGQLIGD 237
Query: 221 IHDG---------------------EAKPRLA---------------------------- 231
DG E P+ A
Sbjct: 238 DTDGHIDTIVRLCPDNTLLYVGCDDENDPQYADLHALEQQLKAATDADGKPYRLLRLPMP 297
Query: 232 ------GTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREI 285
G RL A+Y NF I NG +I P + ++ D A+ ++++AFP Y+++GI+ +R I
Sbjct: 298 DALYDDGDRLPATYANFLIINGAVIVPTYAQEENDARALALVAEAFPGYDIIGID-SRTI 356
Query: 286 VLGGGNIHCITQQQPA 301
V G+IHC+T Q PA
Sbjct: 357 VRQHGSIHCLTMQYPA 372
>gi|420931583|ref|ZP_15394858.1| putative agmatine deiminase [Mycobacterium massiliense 1S-151-0930]
gi|420952093|ref|ZP_15415337.1| putative agmatine deiminase [Mycobacterium massiliense 2B-0626]
gi|420956262|ref|ZP_15419499.1| putative agmatine deiminase [Mycobacterium massiliense 2B-0107]
gi|420962144|ref|ZP_15425369.1| putative agmatine deiminase [Mycobacterium massiliense 2B-1231]
gi|420998071|ref|ZP_15461208.1| putative agmatine deiminase [Mycobacterium massiliense 2B-0912-R]
gi|421002510|ref|ZP_15465634.1| putative agmatine deiminase [Mycobacterium massiliense 2B-0912-S]
gi|392136342|gb|EIU62079.1| putative agmatine deiminase [Mycobacterium massiliense 1S-151-0930]
gi|392157405|gb|EIU83102.1| putative agmatine deiminase [Mycobacterium massiliense 2B-0626]
gi|392185883|gb|EIV11530.1| putative agmatine deiminase [Mycobacterium massiliense 2B-0912-R]
gi|392193968|gb|EIV19588.1| putative agmatine deiminase [Mycobacterium massiliense 2B-0912-S]
gi|392249609|gb|EIV75084.1| putative agmatine deiminase [Mycobacterium massiliense 2B-1231]
gi|392253161|gb|EIV78629.1| putative agmatine deiminase [Mycobacterium massiliense 2B-0107]
Length = 324
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 141/319 (44%), Gaps = 72/319 (22%)
Query: 42 ALHAQRVFAKVATAISKFEPVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTI 101
A A+ +A VA AI FEPV++ A A L I V+E ++ +W RD GPT
Sbjct: 17 AHEARTAWAAVAHAIIDFEPVSMIVDPADRAVAPKYLSREIDVVEAPLDDAWMRDIGPTF 76
Query: 102 VVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSM 161
V +VA +DW FN WG D + W D + R + + S+
Sbjct: 77 VRGTDG--------RVAAVDWVFNGWGARD---WARWDNDAHIGRFVGQLAGVEIVSSSL 125
Query: 162 VLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL---- 217
V EGG I VDGEGT L TE L+ +RNP L K +E EL +G +IWLPRGL
Sbjct: 126 VNEGGGIQVDGEGTVLVTETVQLDPSRNPGLDKRAVEAELARTIGARHVIWLPRGLTRDA 185
Query: 218 --FG-----------------MIH------------------------DGEAK------- 227
FG ++H D + K
Sbjct: 186 ERFGTRGHVDILVAIPSPGRLLVHVQNDPAHPDHAITKEIVDLLAQSRDAKGKAWEITHI 245
Query: 228 PRLAGTRLAASYVNF-----YIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERA 282
P A R + S+V++ + N G+I +F D D A +L++ +P VV ++ A
Sbjct: 246 PAPAVLRDSESWVDYSYINHLVVNDGVIACRFDDSA-DDAATAILAEEYPGRRVVTVD-A 303
Query: 283 REIVLGGGNIHCITQQQPA 301
REI GG IHCITQQQPA
Sbjct: 304 REIFARGGGIHCITQQQPA 322
>gi|408682812|ref|YP_006882639.1| Agmatine deiminase [Streptomyces venezuelae ATCC 10712]
gi|328887141|emb|CCA60380.1| Agmatine deiminase [Streptomyces venezuelae ATCC 10712]
Length = 394
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 148/347 (42%), Gaps = 77/347 (22%)
Query: 16 AEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENAR 75
AEW+ H++ +M WP W DD + A++A A++++E V + A Q A+
Sbjct: 64 AEWDSHTRTFMSWPALAS---VWEDDLPFVREDIARIARAVAEYEAVVMMARPDQVAAAQ 120
Query: 76 SQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCY 135
+ VI + ++ W RDT P V + ++ G+D+NFN WGG
Sbjct: 121 RACGSQVEVIALPVDDLWARDTVPVFVEDGG---------ELLGVDFNFNGWGG-----K 166
Query: 136 RDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL--NKN------ 187
++ + D +V R +L +PR +V EGGS DGEGT L TE ++ N+N
Sbjct: 167 QEHTNDAEVGRLLLKKYGIPREEAPLVAEGGSFETDGEGTLLVTESSIVNDNRNRGKTRD 226
Query: 188 ---------------------RNPHLTKGQIENELK-----------AYLGVMKIIW--- 212
R +T +++ ++ A+ G W
Sbjct: 227 QIEDELIETLGVEKVVWFAGVRGQDITDAHVDSLVRFTAPGVVLLDQAFPGSPADSWSRS 286
Query: 213 --LPRGLFGMIHDGEAK---------PRLA-----GTRLAASYVNFYIANGGIITPQFGD 256
R + D + P LA G ++Y NFY+AN + P+FGD
Sbjct: 287 ADQARSVLEKATDARGRRFEIVDLPQPDLARITGEGDDFVSTYANFYVANDSVFMPRFGD 346
Query: 257 KKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIP 303
+K D A +L + FPK +VV ++ I GGG IHC T QP P
Sbjct: 347 RKADDRARGILQEHFPKRDVVQVQ-IDTIASGGGGIHCATHDQPGKP 392
>gi|414579703|ref|ZP_11436846.1| putative agmatine deiminase [Mycobacterium abscessus 5S-1215]
gi|420877857|ref|ZP_15341224.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0304]
gi|420886586|ref|ZP_15349946.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0421]
gi|420887542|ref|ZP_15350899.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0422]
gi|420892554|ref|ZP_15355898.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0708]
gi|420900254|ref|ZP_15363585.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0817]
gi|420907807|ref|ZP_15371125.1| putative agmatine deiminase [Mycobacterium abscessus 5S-1212]
gi|420969782|ref|ZP_15432983.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0921]
gi|392082349|gb|EIU08175.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0421]
gi|392082766|gb|EIU08591.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0304]
gi|392093666|gb|EIU19463.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0422]
gi|392097615|gb|EIU23409.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0817]
gi|392105711|gb|EIU31497.1| putative agmatine deiminase [Mycobacterium abscessus 5S-1212]
gi|392108435|gb|EIU34215.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0708]
gi|392124227|gb|EIU49988.1| putative agmatine deiminase [Mycobacterium abscessus 5S-1215]
gi|392175720|gb|EIV01381.1| putative agmatine deiminase [Mycobacterium abscessus 5S-0921]
Length = 370
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 117/226 (51%), Gaps = 28/226 (12%)
Query: 14 MPAEWEPHSQCWMGWPVRYE----RLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
MP E EPH + WM + E RL+ Q+ +A I++FEPV++
Sbjct: 43 MPDEGEPHLRTWMAFGASAEIWGKRLNR------KVQQNLGAIARTIAQFEPVSMLVRPE 96
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+ E AR I ++ +++N W RD+GP V N+S A +D+NFN WGG
Sbjct: 97 ETELARQLAGPGIELVPVALNDLWIRDSGPVYVHNESGR---------AAVDFNFNGWGG 147
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
++ D VA ++ +P +VLEGG+I VDG GT + TE C+LN NRN
Sbjct: 148 -----KQEHKSDAMVAAEVAKRAGVPTIHTELVLEGGAIEVDGRGTAIVTESCVLNDNRN 202
Query: 190 PHLTKGQIENELKAYLGVMKIIWLPRGLFGM-IHDGEAK--PRLAG 232
+K ++E EL+ LG+ K+IWLP G+ GM I DG R AG
Sbjct: 203 RGRSKSEVEAELRRLLGLHKVIWLP-GIAGMDITDGHTDFYARFAG 247
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
AA Y+NFY+ANGG+I PQFGD + D +A L + FP VV ++ GG IHC
Sbjct: 305 FAAGYINFYLANGGVIAPQFGDPQADTKAKSTLERLFPGRRVVQLDIDGIAAG-GGGIHC 363
Query: 295 ITQQQP 300
TQQ+P
Sbjct: 364 ATQQEP 369
>gi|255933177|ref|XP_002558059.1| Pc12g12450 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582678|emb|CAP80872.1| Pc12g12450 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 411
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 152/374 (40%), Gaps = 97/374 (25%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+ P E H+ +G+P + + A A +A IS EPV + A
Sbjct: 40 FFYPQETARHAATILGFPSKVSIASAYYQSACVD---IANLACVISTHEPVRLYARPEDA 96
Query: 72 ENARSQLPE----------NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
+ A+S + + NI VI N W RDTGP V G + I+
Sbjct: 97 KQAKSMISQAITRYPSDTSNISVIPFLTNHLWVRDTGPVYV-----RGVGESIHQRFAIN 151
Query: 122 WNFNSWGGVDD-GCY------RDWSL--------DLQVARKILSTERLPR----FPHSMV 162
+ F+ WG D G + RDW + + AR+++ ++ LP +
Sbjct: 152 FRFSEWGRKHDLGAHDRASDGRDWPVMTPEQIEENRSFARRVIESDVLPSQVTLVESHVC 211
Query: 163 LEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLP-------- 214
LEGG++ VDGEGT L TE ++N+NRNP L+K IE EL+ LGV KIIW P
Sbjct: 212 LEGGALVVDGEGTLLATESSIINENRNPGLSKAVIEAELRRLLGVEKIIWFPGRKGLDVT 271
Query: 215 ------------------------------------RGLFGMIHDGEAKP---------- 228
R + G D + +P
Sbjct: 272 DVHADAEVNFVRPGVVVLSRPHSSAPKPWLEVFEEIRDILGKSVDAKGRPFEVHVVDEPN 331
Query: 229 -----RLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAR 283
L+ A +YVNFY NGG+I PQFGD++ D EA+ VL Q V+
Sbjct: 332 PKIFGVLSYDEPATNYVNFYFVNGGLIVPQFGDRRRDQEAL-VLFQKLCPDRVIRPVFVS 390
Query: 284 EIVLGGGNIHCITQ 297
+ L GG IHC TQ
Sbjct: 391 ALPLAGGVIHCATQ 404
>gi|419523181|ref|ZP_14062761.1| agmatine deiminase [Streptococcus pneumoniae GA13723]
gi|379557912|gb|EHZ22949.1| agmatine deiminase [Streptococcus pneumoniae GA13723]
Length = 302
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 89/151 (58%), Gaps = 9/151 (5%)
Query: 69 AQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWG 128
A A+S L + + +++ N +W RDTGPTI+VN K +DW FN+WG
Sbjct: 5 AYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDWAFNAWG 56
Query: 129 GVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
G DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE CLL+
Sbjct: 57 GTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPG 116
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 117 RNPNLTKEEIENTLLESLGAEKVIWLPYGIY 147
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 88/170 (51%), Gaps = 20/170 (11%)
Query: 149 LSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIENEL---- 201
L E++ P+ + + + HVD + E +L + +P + + EL
Sbjct: 134 LGAEKVIWLPYGIYQDETNEHVDNVAAFVGPAELVLAWTDDENDPQYAMSKADLELLEQE 193
Query: 202 -----------KAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGII 250
K + ++ + L G I++ + R AG RLAASYVNFYIAN ++
Sbjct: 194 TDAKGCHFTIHKLPIPAVRQVVTEEDLPGYIYEEGEEKRYAGERLAASYVNFYIANKAVL 253
Query: 251 TPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIHCITQQ P
Sbjct: 254 VPQFEDVN-DQVALDILSKCFPDRKVVGI-PARDILLGGGNIHCITQQIP 301
>gi|397678545|ref|YP_006520080.1| agmatine deiminase [Mycobacterium massiliense str. GO 06]
gi|418251868|ref|ZP_12877928.1| peptidyl-arginine deiminase [Mycobacterium abscessus 47J26]
gi|353448492|gb|EHB96895.1| peptidyl-arginine deiminase [Mycobacterium abscessus 47J26]
gi|395456810|gb|AFN62473.1| Putative agmatine deiminase [Mycobacterium massiliense str. GO 06]
Length = 376
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 117/226 (51%), Gaps = 28/226 (12%)
Query: 14 MPAEWEPHSQCWMGWPVRYE----RLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
MP E EPH + WM + E RL+ Q+ +A AI++FEPV++
Sbjct: 49 MPDEGEPHLRTWMAFGASAEIWGKRLNR------KVQQNLGAIARAIAQFEPVSMLVRPE 102
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+ E AR I ++ +++N W RD+GP V N+S A +D+NFN WG
Sbjct: 103 EAELARQLAGPGIELVPVALNDLWIRDSGPVYVHNESGR---------AAVDFNFNGWGD 153
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
++ D VA ++ +P +VLEGG+I VDG GT + TE C+LN NRN
Sbjct: 154 -----KQEHKSDAMVADEVAKQAGVPTIHTELVLEGGAIEVDGRGTAIVTESCVLNDNRN 208
Query: 190 PHLTKGQIENELKAYLGVMKIIWLPRGLFGM-IHDGEAK--PRLAG 232
+K ++E EL+ LG+ K+IWLP G+ GM I DG R AG
Sbjct: 209 RGRSKSEVEAELRRLLGLHKVIWLP-GIAGMDITDGHTDFYARFAG 253
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
AA Y+NFY+ANGG+I P+FGD + D +A L + FP VV ++ + GGG IHC
Sbjct: 311 FAAGYINFYLANGGVIAPEFGDPQADAKAKSTLERLFPGRRVVQLD-IDGLAAGGGGIHC 369
Query: 295 ITQQQP 300
TQQ+P
Sbjct: 370 ATQQEP 375
>gi|94984142|ref|YP_603506.1| peptidyl-arginine deiminase [Deinococcus geothermalis DSM 11300]
gi|94554423|gb|ABF44337.1| agmatine deiminase [Deinococcus geothermalis DSM 11300]
Length = 343
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 140/346 (40%), Gaps = 70/346 (20%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWE- 72
MP EW H WM WP D W + FA++ I++FEPV + + E
Sbjct: 1 MPPEWAEHQATWMSWPADD---DLWFGHLAAVRDEFAELVRTIARFEPVHLLVRDEESEQ 57
Query: 73 NARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
+AR++L N+ + ++ SW RD GP + A+ AQ P ++ ++W FN+WGG
Sbjct: 58 DARARLAGVNVTAHRVPLDDSWIRDNGPIFLTRGQPAADDAQPPTLSLVNWRFNAWGG-- 115
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
W D +V + LP + VLEGG + V+G G LTT C L RNP
Sbjct: 116 ---KFHWEKDDRVPEYVAGWLNLPHWDRPEVLEGGGLEVNGAGVGLTTRSCFLTPTRNPG 172
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGE-------AKPRLAGTRLAASYVNFYI 244
LT+ L+ LGV K++WL GL DG P T +A +
Sbjct: 173 LTEADYAALLRETLGVEKLLWLDGGLENDHTDGHIDTITRFVDPHTIVTSVAEDKND--- 229
Query: 245 ANGGIITPQFGDKK----WDGEAVRVLSQAFPKYEVVGIE-------------------- 280
AN ++ D + GE R++ P + G E
Sbjct: 230 ANYPVMQKNLADLRAMTDLHGEPFRIVELPLPARRLEGAEGRLPPTYANFYIGNGFVVVP 289
Query: 281 --------------------------RAREIVLGGGNIHCITQQQP 300
R+R I+ GGG+ HC+TQQQP
Sbjct: 290 LYGDPNDARALEVLRPLFPGREVIGLRSRAIIEGGGSFHCLTQQQP 335
>gi|418195955|ref|ZP_12832434.1| agmatine deiminase [Streptococcus pneumoniae GA47688]
gi|353861406|gb|EHE41343.1| agmatine deiminase [Streptococcus pneumoniae GA47688]
Length = 302
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 88/146 (60%), Gaps = 9/146 (6%)
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
A+S L + + +++ N +W RDTGPTI+VN K +DW FN+WGG DG
Sbjct: 10 AQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDWAFNAWGGTYDG 61
Query: 134 CYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
Y+D+ D QVA + P + VLEGG+IH DG+GT L TE CLL+ RNP+L
Sbjct: 62 LYQDYEEDDQVASRFAEVLEKPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPGRNPNL 121
Query: 193 TKGQIENELKAYLGVMKIIWLPRGLF 218
TK +IEN L LG K+IWLP G++
Sbjct: 122 TKEEIENTLLESLGAEKVIWLPYGIY 147
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 237 RLAASYVNFYIANKAVLVPQFEDVN-DQVAIDILSKCFPDRKVVGIP-ARDILLGGGNIH 294
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 295 CITQQIP 301
>gi|420934732|ref|ZP_15398005.1| putative agmatine deiminase [Mycobacterium massiliense 1S-151-0930]
gi|420936099|ref|ZP_15399368.1| putative agmatine deiminase [Mycobacterium massiliense 1S-152-0914]
gi|420940041|ref|ZP_15403308.1| putative agmatine deiminase [Mycobacterium massiliense 1S-153-0915]
gi|420945909|ref|ZP_15409162.1| putative agmatine deiminase [Mycobacterium massiliense 1S-154-0310]
gi|420950238|ref|ZP_15413485.1| putative agmatine deiminase [Mycobacterium massiliense 2B-0626]
gi|420959227|ref|ZP_15422461.1| putative agmatine deiminase [Mycobacterium massiliense 2B-0107]
gi|420959798|ref|ZP_15423029.1| putative agmatine deiminase [Mycobacterium massiliense 2B-1231]
gi|420995157|ref|ZP_15458303.1| putative agmatine deiminase [Mycobacterium massiliense 2B-0307]
gi|420996210|ref|ZP_15459352.1| putative agmatine deiminase [Mycobacterium massiliense 2B-0912-R]
gi|421000641|ref|ZP_15463774.1| putative agmatine deiminase [Mycobacterium massiliense 2B-0912-S]
gi|392133144|gb|EIU58889.1| putative agmatine deiminase [Mycobacterium massiliense 1S-151-0930]
gi|392141614|gb|EIU67339.1| putative agmatine deiminase [Mycobacterium massiliense 1S-152-0914]
gi|392156903|gb|EIU82601.1| putative agmatine deiminase [Mycobacterium massiliense 1S-153-0915]
gi|392159117|gb|EIU84813.1| putative agmatine deiminase [Mycobacterium massiliense 1S-154-0310]
gi|392165324|gb|EIU91011.1| putative agmatine deiminase [Mycobacterium massiliense 2B-0626]
gi|392181259|gb|EIV06911.1| putative agmatine deiminase [Mycobacterium massiliense 2B-0307]
gi|392190979|gb|EIV16606.1| putative agmatine deiminase [Mycobacterium massiliense 2B-0912-R]
gi|392202795|gb|EIV28391.1| putative agmatine deiminase [Mycobacterium massiliense 2B-0912-S]
gi|392248953|gb|EIV74429.1| putative agmatine deiminase [Mycobacterium massiliense 2B-0107]
gi|392257010|gb|EIV82464.1| putative agmatine deiminase [Mycobacterium massiliense 2B-1231]
Length = 370
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 117/226 (51%), Gaps = 28/226 (12%)
Query: 14 MPAEWEPHSQCWMGWPVRYE----RLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
MP E EPH + WM + E RL+ Q+ +A AI++FEPV++
Sbjct: 43 MPDEGEPHLRTWMAFGASAEIWGKRLNR------KVQQNLGAIARAIAQFEPVSMLVRPE 96
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+ E AR I ++ +++N W RD+GP V N+S A +D+NFN WG
Sbjct: 97 EAELARQLAGPGIELVPVALNDLWIRDSGPVYVHNESGR---------AAVDFNFNGWGD 147
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
++ D VA ++ +P +VLEGG+I VDG GT + TE C+LN NRN
Sbjct: 148 -----KQEHKSDAMVADEVAKQAGVPTIHTELVLEGGAIEVDGRGTAIVTESCVLNDNRN 202
Query: 190 PHLTKGQIENELKAYLGVMKIIWLPRGLFGM-IHDGEAK--PRLAG 232
+K ++E EL+ LG+ K+IWLP G+ GM I DG R AG
Sbjct: 203 RGRSKSEVEAELRRLLGLHKVIWLP-GIAGMDITDGHTDFYARFAG 247
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
AA Y+NFY+ANGG+I P+FGD + D +A L + FP VV ++ + GGG IHC
Sbjct: 305 FAAGYINFYLANGGVIAPEFGDPQADAKAKSTLERLFPGRRVVQLD-IDGLAAGGGGIHC 363
Query: 295 ITQQQP 300
TQQ+P
Sbjct: 364 ATQQEP 369
>gi|418112274|ref|ZP_12749276.1| agmatine deiminase [Streptococcus pneumoniae GA41538]
gi|353784140|gb|EHD64561.1| agmatine deiminase [Streptococcus pneumoniae GA41538]
Length = 301
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 89/151 (58%), Gaps = 9/151 (5%)
Query: 69 AQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWG 128
A A+S L + + +++ N +W RDTGPTI+VN K +DW FN+WG
Sbjct: 4 AYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDWAFNAWG 55
Query: 129 GVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
G DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE CLL+
Sbjct: 56 GTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPG 115
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 116 RNPNLTKEEIENTLLESLGAEKVIWLPYGIY 146
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 236 RLAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 293
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 294 CITQQIP 300
>gi|322434991|ref|YP_004217203.1| Agmatine deiminase [Granulicella tundricola MP5ACTX9]
gi|321162718|gb|ADW68423.1| Agmatine deiminase [Granulicella tundricola MP5ACTX9]
Length = 360
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 159/365 (43%), Gaps = 89/365 (24%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+ MPAEWEPH+ W+ WP E +W + V+A++ +S+ E V + + A
Sbjct: 10 FRMPAEWEPHAATWLAWPHNPE---DWPNKFQPIPWVYAEIIRHLSRVEEVHILVNNADA 66
Query: 72 ENARSQLPEN-------IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
E + + + + + W RD+GP N + ++ +W F
Sbjct: 67 ERRADSILKRGGANRSRVHFHQWPTDRVWMRDSGPIFTKNPAG--------DLSITNWRF 118
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRF------PHSMVLEGGSIHVDGEGTCLT 178
N+W D+ +RD + VA ER P PH +VLEGGSI V+G GT +T
Sbjct: 119 NAWAKYDN-WHRDDLVPHMVAEHYAMPERRPEARQPDGAPHRLVLEGGSIDVNGAGTLIT 177
Query: 179 TEECLLN--KNRNPHL-----TKGQIE----------------------------NELKA 203
TEECLL+ + RNP L T+ Q+E +++
Sbjct: 178 TEECLLSEIQQRNPGLGDEKATREQLEIAFREHLGVQQTIWLNRGCAGDDTHGHVDDITR 237
Query: 204 YLGVMKII-----------WLP-----------RGLFGMIHDGEAKPR-----LAGTRLA 236
++G KI+ LP R L G + P RL
Sbjct: 238 FVGENKIVTCVEPNTADENHLPLAENLARLRAARNLKGEPFEIVTLPMPCPVVFESQRLP 297
Query: 237 ASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCIT 296
ASY NFYIANG ++ P F D D A+ L+ FP EV+GI A ++V G G +HC++
Sbjct: 298 ASYANFYIANGLVLVPTFNDAC-DRHALNTLAACFPDREVIGIH-AVDLVWGLGTLHCMS 355
Query: 297 QQQPA 301
QQ+PA
Sbjct: 356 QQEPA 360
>gi|418132763|ref|ZP_12769636.1| agmatine deiminase [Streptococcus pneumoniae GA11304]
gi|353806719|gb|EHD86992.1| agmatine deiminase [Streptococcus pneumoniae GA11304]
Length = 302
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 89/151 (58%), Gaps = 9/151 (5%)
Query: 69 AQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWG 128
A A+S L + + +++ N +W RDTGPTI+VN K +DW FN+WG
Sbjct: 5 AYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDWAFNAWG 56
Query: 129 GVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
G DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE CLL+
Sbjct: 57 GTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPG 116
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 117 RNPNLTKEEIENTLLESLGAEKVIWLPYGIY 147
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 237 RLAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 294
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 295 CITQQIP 301
>gi|149185114|ref|ZP_01863431.1| Porphyromonas-type peptidyl-arginine deiminase [Erythrobacter sp.
SD-21]
gi|148831225|gb|EDL49659.1| Porphyromonas-type peptidyl-arginine deiminase [Erythrobacter sp.
SD-21]
Length = 334
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 150/352 (42%), Gaps = 76/352 (21%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKF--E 60
MN TP + MP EW P W+G+P D W + AQ A A A+++ E
Sbjct: 1 MNDTPR---WTMPPEWAPQDWLWIGFP---HDADEWPEVLPRAQEQIAAFANAVAESGQE 54
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
+ AA + AR + ++ + W RDTGP +V+ ++ AQ
Sbjct: 55 VRLLVRDAANEQRARDLVSGSVTLERREYGDVWLRDTGP-LVLTDATGHRMAQR------ 107
Query: 121 DWNFNSWGG--VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLT 178
+ FN WGG + +G D + ++ LP VLEGG+I DG G T
Sbjct: 108 -FGFNGWGGKYLMEG-------DHTIGAELAEDAGLPLEVADWVLEGGAIDGDGTGLVAT 159
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG-------------- 224
TE+CLLN NRNP LT+ +IE LK+ LG +++WL GL DG
Sbjct: 160 TEQCLLNPNRNPQLTREEIEERLKSDLGFTRVLWLGDGLINDHTDGHVDNLARFVGANTL 219
Query: 225 -----------------EAKPR-----------------LAGTRLA-ASYVNFYIANGGI 249
+AK R +G R+ ASY NF I + +
Sbjct: 220 ALPRATGKDDPNAAIYEDAKARAEEAGVVVQSIPSPGLITSGDRVEPASYANFAITSHLV 279
Query: 250 ITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
+ P FG +D E V ++ FP +GI ++ GGG HC +QQ PA
Sbjct: 280 VVPTFG-SPYDEEGVAAIADLFPDRATIGIS-GDAVLAGGGGFHCASQQMPA 329
>gi|294816245|ref|ZP_06774888.1| putative peptidyl-arginine deiminase family protein [Streptomyces
clavuligerus ATCC 27064]
gi|326444575|ref|ZP_08219309.1| putative peptidyl-arginine deiminase family protein [Streptomyces
clavuligerus ATCC 27064]
gi|294328844|gb|EFG10487.1| putative peptidyl-arginine deiminase family protein [Streptomyces
clavuligerus ATCC 27064]
Length = 387
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 110/206 (53%), Gaps = 17/206 (8%)
Query: 8 ALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCAS 67
A G + AEWE H++ +M WP W +D + ++ A++A A+ ++E V + A
Sbjct: 49 AAGGRRLGAEWESHTRTFMSWPALAS---VWEEDLPYVRKDIARIARAVGEYEAVVMMAR 105
Query: 68 AAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSW 127
AQ + A+ + VI ++++ W RDT P V Q +V G+D++FN W
Sbjct: 106 PAQVKAAQRACGSQVEVIPLAVDDLWARDTVPVFV---------EQDGRVTGVDFHFNGW 156
Query: 128 GGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
G + + D +V R +L +PR +V EGGS DGEGT L TE ++N N
Sbjct: 157 GDKQEHTH-----DARVGRALLPEYGIPRVEAPLVAEGGSFETDGEGTLLITESSIVNVN 211
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWL 213
RNP ++ +IE ELK LGV K++WL
Sbjct: 212 RNPGRSRDRIEAELKQSLGVEKVVWL 237
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 232 GTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGN 291
G ASY NFYIAN + P+FGD+K D A +L + FP +VV + + GGG
Sbjct: 315 GEDFLASYANFYIANDSVFLPRFGDRKADDRARGILREHFPNRDVVQVT-IDTVASGGGG 373
Query: 292 IHCITQQQPAIP 303
IHC T QP P
Sbjct: 374 IHCATHDQPGRP 385
>gi|418139268|ref|ZP_12776098.1| agmatine deiminase [Streptococcus pneumoniae GA13338]
gi|418173289|ref|ZP_12809903.1| agmatine deiminase [Streptococcus pneumoniae GA41277]
gi|353839988|gb|EHE20062.1| agmatine deiminase [Streptococcus pneumoniae GA41277]
gi|353905511|gb|EHE80934.1| agmatine deiminase [Streptococcus pneumoniae GA13338]
Length = 302
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 89/151 (58%), Gaps = 9/151 (5%)
Query: 69 AQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWG 128
A A+S L + + +++ N +W RDTGPTI+VN K +DW FN+WG
Sbjct: 5 AYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDWAFNAWG 56
Query: 129 GVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
G DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE CLL+
Sbjct: 57 GTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPG 116
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 117 RNPNLTKEEIENTLLESLGAEKVIWLPYGIY 147
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 237 RLAASYVNFYIANKAVLVPQFEDVN-DQVALDILSKCFPDRKVVGIP-ARDILLGGGNIH 294
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 295 CITQQIP 301
>gi|418157611|ref|ZP_12794327.1| agmatine deiminase [Streptococcus pneumoniae GA16833]
gi|353824059|gb|EHE04233.1| agmatine deiminase [Streptococcus pneumoniae GA16833]
Length = 301
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 88/146 (60%), Gaps = 9/146 (6%)
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
A+S L + + +++ N +W RDTGPTI+VN K +DW FN+WGG DG
Sbjct: 9 AQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDWAFNAWGGTYDG 60
Query: 134 CYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
Y+D+ D QVA + P + VLEGG+IH DG+GT L TE CLL+ RNP+L
Sbjct: 61 LYQDYEEDDQVASRFAEVLEKPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPGRNPNL 120
Query: 193 TKGQIENELKAYLGVMKIIWLPRGLF 218
TK +IEN L LG K+IWLP G++
Sbjct: 121 TKEEIENTLLESLGAEKVIWLPYGIY 146
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RLAASYVNFYIAN ++ PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIH
Sbjct: 236 RLAASYVNFYIANKAVLVPQFEDVN-DQVAIDILSKCFPDRKVVGIP-ARDILLGGGNIH 293
Query: 294 CITQQQP 300
CITQQ P
Sbjct: 294 CITQQIP 300
>gi|406661659|ref|ZP_11069774.1| Putative agmatine deiminase [Cecembia lonarensis LW9]
gi|405554503|gb|EKB49587.1| Putative agmatine deiminase [Cecembia lonarensis LW9]
Length = 350
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 116/232 (50%), Gaps = 22/232 (9%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
+E TP GY PAE+ PH+ W+ WP + +W +A+ +++ E
Sbjct: 3 IENGKTPLELGYTFPAEFYPHAATWLSWP---HKEASWPGKIATIFPAYAQFVKLLAEGE 59
Query: 61 PVTVCASAAQWE--------NARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGA 112
V + + + E NA + L + I N +W RD GP ++N+ +A
Sbjct: 60 EVHINVADQKMEEFALSHLLNAEADLSKVI-FHHFPTNDAWCRDHGPAFLINEKAAQ--- 115
Query: 113 QAPKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDG 172
+ A + W +N+WG Y + LD ++ I P F +V+EGGSI V+G
Sbjct: 116 ---RKALVKWKYNAWGNK----YPPYDLDNEIPFHIAKYRDTPCFTPGIVMEGGSIEVNG 168
Query: 173 EGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
+GT +TTE CLLN NRNPHL+K QIE L+ Y GV I+WL G+ G DG
Sbjct: 169 KGTLMTTEACLLNPNRNPHLSKSQIEKYLRDYYGVENILWLKDGIVGDDTDG 220
>gi|85709960|ref|ZP_01041025.1| peptidylarginine deiminase [Erythrobacter sp. NAP1]
gi|85688670|gb|EAQ28674.1| peptidylarginine deiminase [Erythrobacter sp. NAP1]
Length = 326
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 140/338 (41%), Gaps = 66/338 (19%)
Query: 13 LMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWE 72
LMP EW P W+G+P E W A FA A A S E + A
Sbjct: 4 LMPPEWAPQDWLWIGFPHLAEEWPGWLAPAQEQIAAFAS-AVAESGQEVRLLVRDADNGA 62
Query: 73 NARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDD 132
A+S + + + + + W RDTGP IV + S S+ + + FN WGG
Sbjct: 63 RAKSLVSDKVTLERRTYGDIWLRDTGPLIVSDGGSRSA---------VRFGFNGWGG--- 110
Query: 133 GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
D + ++ LP +M+LEGG++ DG G TTE+CLLN NRN +
Sbjct: 111 --KYLMPGDPTIGEELARDAGLPVQNSTMILEGGALDGDGTGLVATTEQCLLNPNRNSGM 168
Query: 193 TKGQIENELKAYLGVMKIIWLPRGLF---------------------------------G 219
T+ +IE ELK LG +++WL GL
Sbjct: 169 TREEIEAELKEMLGFDRVLWLGDGLLCDHTDGHVDNLARFVGPNQLVVPHATGDDDPNAA 228
Query: 220 MIHDGEAKPRLAGTRLA----------------ASYVNFYIANGGIITPQFGDKKWDGEA 263
+ D +A+ G + ASYVNF I + ++ P FG D E
Sbjct: 229 IYADAKARAEAFGVEVVTIPSPGLIERDGMIEPASYVNFAITSNLVVVPTFGSPH-DEEG 287
Query: 264 VRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
V +++ FP + VG+ ++ GGG HC +QQ P+
Sbjct: 288 VAAIAELFPDRDTVGLP-GDAVLAGGGGFHCASQQMPS 324
>gi|126727198|ref|ZP_01743035.1| porphyromonas-type peptidyl-arginine deiminase family protein
[Rhodobacterales bacterium HTCC2150]
gi|126703626|gb|EBA02722.1| porphyromonas-type peptidyl-arginine deiminase family protein
[Rhodobacterales bacterium HTCC2150]
Length = 348
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 142/351 (40%), Gaps = 83/351 (23%)
Query: 10 HGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVF--------AKVATAISKFEP 61
G+ +PAE + H +M WPV + +H RVF A +A I FEP
Sbjct: 21 QGFKVPAEEDAHEATFMQWPVNRQ---------VHPDRVFLGMLQQTIADIANTIVDFEP 71
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
V + A+ A AR L + + ++ W RD+GP +N + Q
Sbjct: 72 VIMLAAKADHAKARRFLSNKVELWDIPTEDLWARDSGPLFAINPEGQRAITQ-------- 123
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
NFN WGG RD ++ +VA+ + LP +V E G + DG GT + E
Sbjct: 124 LNFNGWGG-KQIHKRDGNIAAEVAQVL----DLPIRDTGLVGESGGLDQDGRGTLIAHES 178
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIW----------------------------- 212
+NKNRN +LT+ QIE L G ++IW
Sbjct: 179 SWVNKNRN-NLTRPQIERRLLTAFGADRVIWAPGLWNEDITDYHIDSLARFTSRDRVLIQ 237
Query: 213 ----------------------LPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGII 250
L GL + +PR+ ASY N+Y+ NGG+I
Sbjct: 238 LPDNPDETDPFHMAALETHDILLDAGLTLDVIPEPTRPRVKSLDFVASYANYYVCNGGLI 297
Query: 251 TPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
QFGD D A+ L Q +P E+V + +GGG IHC TQQ PA
Sbjct: 298 AAQFGDPVTDAIALAALKQHYPNSEIVTLNVDPLGEVGGG-IHCATQQMPA 347
>gi|411007222|ref|ZP_11383551.1| agmatine deiminase [Streptomyces globisporus C-1027]
Length = 343
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 109/208 (52%), Gaps = 13/208 (6%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+ MP EW PH + WM WP + A+R +A VA A+ +FEPVT+ Q
Sbjct: 8 FRMPPEWAPHERTWMAWPGPNPTFAA-DAELAEARRAWAAVARAVRRFEPVTMVVGPGQE 66
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
E A + L ++ ++ ++ +W RD GPT V + + +A +DW FN WG D
Sbjct: 67 EGAAALLGPDVELVVRPLDDAWMRDIGPTFVTDGRT---------LAAVDWTFNGWGAQD 117
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
+ W D +AR + +P +V EGG+IHVDGEGT L TE L + RNP
Sbjct: 118 ---WARWENDQHIARAVAELTGVPAHSSPLVNEGGAIHVDGEGTVLLTETVQLGEERNPG 174
Query: 192 LTKGQIENELKAYLGVMKIIWLPRGLFG 219
++ Q+ E+ A LG K IWLPRGL G
Sbjct: 175 WSREQVAAEIHARLGTEKAIWLPRGLTG 202
>gi|420862376|ref|ZP_15325772.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0303]
gi|420866961|ref|ZP_15330348.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0726-RA]
gi|420871409|ref|ZP_15334789.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0726-RB]
gi|420987773|ref|ZP_15450929.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0206]
gi|421037890|ref|ZP_15500901.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0116-R]
gi|421046611|ref|ZP_15509611.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0116-S]
gi|392075292|gb|EIU01126.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0726-RA]
gi|392075598|gb|EIU01431.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0726-RB]
gi|392077537|gb|EIU03368.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0303]
gi|392182052|gb|EIV07703.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0206]
gi|392226104|gb|EIV51618.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0116-R]
gi|392236064|gb|EIV61562.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0116-S]
Length = 370
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 116/226 (51%), Gaps = 28/226 (12%)
Query: 14 MPAEWEPHSQCWMGWPVRYE----RLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
MP E PH + WM + E RL+ Q+ +A AI++FEPV++
Sbjct: 43 MPDEGAPHLRTWMAFGASAEIWGKRLNR------KVQQNLGAIARAIAQFEPVSMLVRPE 96
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+ E AR I ++ +++N W RD GP V N+S A +D+NFN WGG
Sbjct: 97 ETELARQLAGPGIELVPVALNDLWIRDNGPVYVHNESGR---------AAVDFNFNGWGG 147
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
++ D VA ++ +P +VLEGG+I VDG GT + TE C+LN NRN
Sbjct: 148 -----KQEHKSDAMVAAEVAKRAGVPTIHTELVLEGGAIEVDGRGTAIVTESCVLNDNRN 202
Query: 190 PHLTKGQIENELKAYLGVMKIIWLPRGLFGM-IHDGEAK--PRLAG 232
+K ++E EL+ LG+ K+IWLP G+ GM I DG R AG
Sbjct: 203 RGRSKSEVEAELRRLLGLHKVIWLP-GIAGMDITDGHTDFYARFAG 247
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
AA Y+NFY+ANGG+I PQFGD + D +A L + FP VV ++ GG IHC
Sbjct: 305 FAAGYINFYLANGGVIAPQFGDPQADTKAKSTLERLFPGRRVVQLDIDGIAAG-GGGIHC 363
Query: 295 ITQQQP 300
TQQ+P
Sbjct: 364 ATQQEP 369
>gi|421047394|ref|ZP_15510392.1| putative agmatine deiminase [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|392243946|gb|EIV69429.1| putative agmatine deiminase [Mycobacterium massiliense CCUG 48898]
Length = 370
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 117/226 (51%), Gaps = 28/226 (12%)
Query: 14 MPAEWEPHSQCWMGWPVRYE----RLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
MP E EPH + WM + E RL+ Q+ +A AI++FEPV++
Sbjct: 43 MPDEGEPHLRTWMAFGASAEIWGQRLNR------KVQQNLGAIARAIAQFEPVSMLVRPE 96
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+ E AR I ++ +++N W RD+GP V N+S A +D+NFN WG
Sbjct: 97 EAELARQLAGPGIELVPVALNDLWIRDSGPVYVHNESGR---------AAVDFNFNGWGD 147
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
++ D VA ++ +P +VLEGG+I VDG GT + TE C+LN NRN
Sbjct: 148 -----KQEHKSDAVVADEVAKQAGVPTIHTELVLEGGAIEVDGRGTAIVTESCVLNDNRN 202
Query: 190 PHLTKGQIENELKAYLGVMKIIWLPRGLFGM-IHDGEAK--PRLAG 232
+K ++E EL+ LG+ K+IWLP G+ GM I DG R AG
Sbjct: 203 RGRSKSEVEAELRRLLGLHKVIWLP-GIAGMDITDGHTDFYARFAG 247
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
AA Y+NFY+ANGG+I P+FGD + D +A L + FP VV ++ + GGG IHC
Sbjct: 305 FAAGYINFYLANGGVIAPEFGDPQADAKAKSTLERLFPGRRVVQLD-IDGLAAGGGGIHC 363
Query: 295 ITQQQP 300
TQQ+P
Sbjct: 364 ATQQEP 369
>gi|365868555|ref|ZP_09408105.1| peptidyl-arginine deiminase [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|364000256|gb|EHM21456.1| peptidyl-arginine deiminase [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
Length = 376
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 117/226 (51%), Gaps = 28/226 (12%)
Query: 14 MPAEWEPHSQCWMGWPVRYE----RLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
MP E EPH + WM + E RL+ Q+ +A AI++FEPV++
Sbjct: 49 MPDEGEPHLRTWMAFGASAEIWGQRLNR------KVQQNLGAIARAIAQFEPVSMLVRPE 102
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+ E AR I ++ +++N W RD+GP V N+S A +D+NFN WG
Sbjct: 103 EAELARQLAGPGIELVPVALNDLWIRDSGPVYVHNESGR---------AAVDFNFNGWGD 153
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
++ D VA ++ +P +VLEGG+I VDG GT + TE C+LN NRN
Sbjct: 154 -----KQEHKSDAVVADEVAKQAGVPTIHTELVLEGGAIEVDGRGTAIVTESCVLNDNRN 208
Query: 190 PHLTKGQIENELKAYLGVMKIIWLPRGLFGM-IHDGEAK--PRLAG 232
+K ++E EL+ LG+ K+IWLP G+ GM I DG R AG
Sbjct: 209 RGRSKSEVEAELRRLLGLHKVIWLP-GIAGMDITDGHTDFYARFAG 253
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
AA Y+NFY+ANGG+I P+FGD + D +A L + FP VV ++ + GGG IHC
Sbjct: 311 FAAGYINFYLANGGVIAPEFGDPQADAKAKSTLERLFPGRRVVQLD-IDGLAAGGGGIHC 369
Query: 295 ITQQQP 300
TQQ+P
Sbjct: 370 ATQQEP 375
>gi|418418759|ref|ZP_12991944.1| peptidyl-arginine deiminase [Mycobacterium abscessus subsp.
bolletii BD]
gi|364001932|gb|EHM23124.1| peptidyl-arginine deiminase [Mycobacterium abscessus subsp.
bolletii BD]
Length = 376
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 117/226 (51%), Gaps = 28/226 (12%)
Query: 14 MPAEWEPHSQCWMGWPVRYE----RLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
MP E +PH + WM + E RL+ Q+ +A I++FEPV++
Sbjct: 49 MPDEGDPHLRTWMAFGASAEIWGKRLNR------KVQQNLGAIARTIAQFEPVSMLVRPE 102
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
+ E AR I ++ +++N W RD+GP V N+S A +D+NFN WGG
Sbjct: 103 ETELARQLAGPGIELVPVALNDLWIRDSGPVYVHNESGR---------AAVDFNFNGWGG 153
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
++ D VA ++ +P +VLEGG+I VDG GT + TE C+LN NRN
Sbjct: 154 -----KQEHKSDAMVAAEVAKRAGVPTIHTELVLEGGAIEVDGRGTAIVTESCVLNDNRN 208
Query: 190 PHLTKGQIENELKAYLGVMKIIWLPRGLFGM-IHDGEAK--PRLAG 232
+K ++E EL+ LG+ K+IWLP G+ GM I DG R AG
Sbjct: 209 RGRSKSEVEAELRRLLGLHKVIWLP-GIAGMDITDGHTDFYARFAG 253
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHC 294
AA Y+NFY+ANGG+I PQFGD + D +A L + FP VV ++ GG IHC
Sbjct: 311 FAAGYINFYLANGGVIAPQFGDPQADTKAKSTLERLFPGRRVVQLDIDGIAAG-GGGIHC 369
Query: 295 ITQQQP 300
TQQ+P
Sbjct: 370 ATQQEP 375
>gi|418107312|ref|ZP_12744350.1| agmatine deiminase [Streptococcus pneumoniae GA41410]
gi|353779495|gb|EHD59959.1| agmatine deiminase [Streptococcus pneumoniae GA41410]
Length = 302
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 89/151 (58%), Gaps = 9/151 (5%)
Query: 69 AQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWG 128
A A+S L + + +++ N +W RDTGPTI+VN K +DW FN+WG
Sbjct: 5 AYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDWAFNAWG 56
Query: 129 GVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
G DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE CLL+
Sbjct: 57 GTYDGLYQDYEEDDQVASRFAEALGKPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPG 116
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 117 RNPNLTKEEIENTLLESLGAEKVIWLPYGIY 147
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 88/170 (51%), Gaps = 20/170 (11%)
Query: 149 LSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIENEL---- 201
L E++ P+ + + + HVD + E +L + +P + + EL
Sbjct: 134 LGAEKVIWLPYGIYQDETNEHVDNVAAFVGPAELVLAWTDDENDPQYAMSKADLELLEQE 193
Query: 202 -----------KAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGII 250
K + ++ + L G I++ + R AG RLAASYVNFYIAN ++
Sbjct: 194 TDAKGCHFTIHKLPIPAVRQVVTEEDLPGYIYEEGEEKRYAGERLAASYVNFYIANKAVL 253
Query: 251 TPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIHCITQQ P
Sbjct: 254 VPQFEDVN-DQVALDILSKCFPDRKVVGI-PARDILLGGGNIHCITQQIP 301
>gi|418420638|ref|ZP_12993817.1| putative agmatine deiminase [Mycobacterium abscessus subsp.
bolletii BD]
gi|363999411|gb|EHM20616.1| putative agmatine deiminase [Mycobacterium abscessus subsp.
bolletii BD]
Length = 324
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 133/305 (43%), Gaps = 72/305 (23%)
Query: 55 AISKFEPVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQA 114
AI FEPV++ + A A L I V+E ++ +W RD GPT V
Sbjct: 30 AIIDFEPVSMIVAPADRAVAPKYLSREIDVVEAPLDDAWMRDIGPTFVRGTDG------- 82
Query: 115 PKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEG 174
+VA +DW FN WG D + W D + R + + S+V EGG I VDGEG
Sbjct: 83 -RVAAVDWVFNGWGARD---WARWDNDAHIGRFVGQLAGVEIVSSSLVNEGGGIQVDGEG 138
Query: 175 TCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL------FGM-------- 220
T L TE L+ +RNP L + +E EL +G +IWLPRGL FG
Sbjct: 139 TVLVTETVQLDPSRNPGLDRHAVEAELARTIGARHVIWLPRGLTRDAERFGTRGHVDILV 198
Query: 221 -----------IHDGEAKPRLAGTR-----LAAS-------------------------- 238
+ + A P A T+ LA S
Sbjct: 199 AIPSPGRLLVHVQNDPAHPDHAITKEIVDLLAQSHDANGKVWEITPIPAPSVLRDSESWV 258
Query: 239 ---YVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCI 295
Y+N + N G+I +FGD D A +L++ +P VV ++ AREI GG IHCI
Sbjct: 259 DYSYINHLVVNDGVIACRFGDAA-DDAATAILAEEYPGRRVVTVD-AREIFARGGGIHCI 316
Query: 296 TQQQP 300
TQQQP
Sbjct: 317 TQQQP 321
>gi|418096030|ref|ZP_12733145.1| agmatine deiminase [Streptococcus pneumoniae GA16531]
gi|353771017|gb|EHD51528.1| agmatine deiminase [Streptococcus pneumoniae GA16531]
Length = 301
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 89/151 (58%), Gaps = 9/151 (5%)
Query: 69 AQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWG 128
A A+S L + + +++ N +W RDTGPTI+VN K +DW FN+WG
Sbjct: 4 AYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKG--------KKLAVDWAFNAWG 55
Query: 129 GVDDGCYRDWSLDLQVARKILSTERLPRF-PHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
G DG Y+D+ D QVA + P + VLEGG+IH DG+GT L TE CLL+
Sbjct: 56 GTYDGLYQDYEEDDQVASRFAEALGRPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPG 115
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLPRGLF 218
RNP+LTK +IEN L LG K+IWLP G++
Sbjct: 116 RNPNLTKEEIENTLLESLGAEKVIWLPYGIY 146
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 88/170 (51%), Gaps = 20/170 (11%)
Query: 149 LSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL---NKNRNPHLTKGQIENEL---- 201
L E++ P+ + + + HVD + E +L + +P + + EL
Sbjct: 133 LGAEKVIWLPYGIYQDETNEHVDNVAAFVGPAELVLAWTDDENDPQYAMSKADLELLEQE 192
Query: 202 -----------KAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGII 250
K + ++ + L G I++ + R AG RLAASYVNFYIAN ++
Sbjct: 193 TDAKGCHFTIHKLPIPAVRQVVTEEDLPGYIYEEGEEKRYAGERLAASYVNFYIANKAVL 252
Query: 251 TPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
PQF D D A+ +LS+ FP +VVGI AR+I+LGGGNIHCITQQ P
Sbjct: 253 VPQFEDVN-DQVALDILSKCFPDRKVVGI-PARDILLGGGNIHCITQQIP 300
>gi|320107000|ref|YP_004182590.1| Agmatine deiminase [Terriglobus saanensis SP1PR4]
gi|319925521|gb|ADV82596.1| Agmatine deiminase [Terriglobus saanensis SP1PR4]
Length = 348
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 153/354 (43%), Gaps = 82/354 (23%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCAS--AA 69
Y MPAEW PH+ W+ WP E +W V+A++ ++ E V + + AA
Sbjct: 13 YRMPAEWAPHAATWIAWPHNAE---DWPGRFQPIPWVYAEIVRNLALVEDVNILVNDEAA 69
Query: 70 QWENARSQLPENIRVIEMSM-----NGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
+ R L + + + W RD+GP V N ++ + DW F
Sbjct: 70 EKRVTRILLRAGANMARLHFHLWRTDRIWLRDSGPIFVKNAANEN--------IITDWKF 121
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRFP-----HSMVLEGGSIHVDGEGTCLTT 179
N+W Y + D ++ + + T+ + H +VLEGGSI V+G GT LTT
Sbjct: 122 NAWAK-----YPNHLNDDRIPQHVSKTQAVQALQPMIGNHRVVLEGGSIDVNGAGTLLTT 176
Query: 180 EECLLN--KNRNPHLTKGQIENELKAYLGVMKIIWLPRGL-----FGMIHD--------- 223
EECLL+ + RNP +++ Q+E YLG+ + IWL RG G + D
Sbjct: 177 EECLLSDVQQRNPGISRQQLETCFAEYLGITQTIWLNRGCAGDDTHGHVDDIARFVNEST 236
Query: 224 -----------------GEAKPRLAGTR-------------------LAASYVNFYIANG 247
E RL + L ASY NFYIAN
Sbjct: 237 IMAAVEHNTADENHLPLAENLDRLRALKQFNIVELPMPSPVIFDGERLPASYANFYIAND 296
Query: 248 GIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
++ P F D D A+ +++ FP + VGI + + G G +HC+TQQ+PA
Sbjct: 297 LVLVPTFNDAN-DRAALNLIADQFPTRKTVGIH-CGDFIWGLGALHCMTQQEPA 348
>gi|427713309|ref|YP_007061933.1| peptidylarginine deiminase-like protein [Synechococcus sp. PCC
6312]
gi|427377438|gb|AFY61390.1| peptidylarginine deiminase-like enzyme [Synechococcus sp. PCC 6312]
Length = 346
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 105/225 (46%), Gaps = 31/225 (13%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
P G+ PAEW+ H CW+ +P E W ++ Q FA + AI+ +P+T
Sbjct: 3 VPPAQGFFHPAEWQFHQACWLAFPSHAEL---WGENLPSVQAEFAALCQAIAFPDPLTGQ 59
Query: 66 ASAAQWENARSQLPE-----------NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQA 114
Q + P N + W RDTGP + N+ G QA
Sbjct: 60 PQGEQLKILVLDAPGEATAQAMLNGLNPEFYHIPFGDIWLRDTGPIFLRNQ-----GGQA 114
Query: 115 PKVAGIDWNFNSWGGVDDGCYRDWSL--DLQVARKILSTERLPRFPHSMVLEGGSIHVDG 172
A + + FN WG +SL D QVA I LP++ VLEGG+I DG
Sbjct: 115 ---ATVRFRFNGWG-------EKYSLPGDAQVAENIAQAVDLPQYSFPFVLEGGAIETDG 164
Query: 173 EGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL 217
GTCLTT +CLLN NRNPHLT +I L A G K++WL +GL
Sbjct: 165 AGTCLTTRQCLLNPNRNPHLTPSEITESLNAVFGYQKVLWLDQGL 209
>gi|78048056|ref|YP_364231.1| peptidylarginine deiminase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|346725202|ref|YP_004851871.1| peptidylarginine deiminase [Xanthomonas axonopodis pv. citrumelo
F1]
gi|78036486|emb|CAJ24177.1| putative peptidylarginine deiminase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|346649949|gb|AEO42573.1| peptidylarginine deiminase [Xanthomonas axonopodis pv. citrumelo
F1]
Length = 344
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 149/352 (42%), Gaps = 83/352 (23%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCAS------ 67
PAEWEP S + WP +W + + + + TAIS+FEPV +C +
Sbjct: 7 FPAEWEPQSAVLLAWP---HAGTDWAERLADVEETYIALVTAISRFEPVVICVADDDLQI 63
Query: 68 --AAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A+ +AR + +R + + N +W RD+GP + ++ +D+ F
Sbjct: 64 YAEARLRSARVDM-TRVRFVIAAYNDTWLRDSGPITLRQEAGFRL---------MDFRFT 113
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
WGG + D + A ++ ++ LEGG+I DG GT LTT +CL
Sbjct: 114 GWGGKFEASLDDQLVSSLDAAQVFVPAQVETI--DFALEGGAIETDGAGTLLTTWKCL-- 169
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF-------------------GMIHDGEA 226
R+P T+ + ++L +L +++WL G +++ G
Sbjct: 170 HERHPQRTRESLSSDLATWLAQERVLWLDHGYLEGDDTDAHIDTLARFAGPDAIVYQGCD 229
Query: 227 KP-------------RLAGTR------------------------LAASYVNFYIANGGI 249
P LA R LAASY NF I NG +
Sbjct: 230 VPGDSHYVELQAMGAELAALRRADGQPYRLFVLPWAQPILDEGRRLAASYANFLIVNGAV 289
Query: 250 ITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
+ P +GD D A VL+QAFP++E+V + R ++ G++HC+T Q PA
Sbjct: 290 LMPAYGDAA-DATAQAVLAQAFPQHEIVPVP-CRALIWQNGSLHCLTMQLPA 339
>gi|291299581|ref|YP_003510859.1| Agmatine deiminase [Stackebrandtia nassauensis DSM 44728]
gi|290568801|gb|ADD41766.1| Agmatine deiminase [Stackebrandtia nassauensis DSM 44728]
Length = 364
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 110/209 (52%), Gaps = 25/209 (11%)
Query: 14 MPAEWEPHSQCWMGWPVRY---ERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQ 70
MP E PH +M WP +D+ RDD A +A AI++FEPV + A+A+
Sbjct: 37 MPDEAHPHELTYMSWPTEKIWGPYIDDVRDD-------IAGIARAIAEFEPVVLLANASD 89
Query: 71 WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
+ A + VI + ++ W RDTGP +V+ K +AG+D NFN WG
Sbjct: 90 VKAASKACGSEVDVIPIPVDDLWTRDTGPNLVLGKGG---------IAGVDLNFNGWGD- 139
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
+ D +VAR+IL+ + R +V EGGSI VDG+GT L TE L+N NRNP
Sbjct: 140 ----KQSNKRDREVAREILAEADIERIKAPIVGEGGSIEVDGKGTLLATESSLVNDNRNP 195
Query: 191 HLTKGQIENELKAYLGVMKIIWLPRGLFG 219
++ IE LK GV +IW+ +G+ G
Sbjct: 196 GKSRDDIEAALKRLFGVTTVIWV-KGVKG 223
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 232 GTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGN 291
G ASYVN+Y+ N G++ P+FGDK+ D +A +++ +P EVV + + GGG
Sbjct: 294 GENFLASYVNYYVVNDGVVIPRFGDKRADADAKSIVADLYPGREVVQVS-VDGLGEGGGG 352
Query: 292 IHCITQQQP 300
IHC TQQ P
Sbjct: 353 IHCATQQLP 361
>gi|83950394|ref|ZP_00959127.1| porphyromonas-type peptidyl-arginine deiminase family protein
[Roseovarius nubinhibens ISM]
gi|83838293|gb|EAP77589.1| porphyromonas-type peptidyl-arginine deiminase family protein
[Roseovarius nubinhibens ISM]
Length = 356
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 144/344 (41%), Gaps = 68/344 (19%)
Query: 11 GYLMPAEWEPHSQCWMGWPV-RYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
GY +P E PH++ +M WPV R D D AQ+ A +A +I++FEPV + A A
Sbjct: 29 GYAVPPEEAPHARSFMQWPVNRKVHPDPVFLDM--AQQTIADIANSIAEFEPVILLADKA 86
Query: 70 QWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
AR +L + + ++ W RD GP VVN GA V+ I FN WG
Sbjct: 87 DHARARKKLSARVELWDIPTEDLWCRDAGPIFVVN------GAGDLAVSHI--QFNGWGE 138
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRN 189
+ D Q+A ++ L P + E G + DG G L E +N NRN
Sbjct: 139 KQVHAH-----DAQIAARVAERLGLRLLPSGLRGEAGGVEQDGHGLLLAHESSWVNDNRN 193
Query: 190 PHLTKGQIENELKAYLGVMKIIW------------------------------------- 212
P L++ +IE L A G ++IW
Sbjct: 194 PGLSRDEIEARLLAAYGAERMIWSDGVWGEDITDYHIDSLARFTGPGRVLINLPDDPDMG 253
Query: 213 --------------LPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKK 258
L GL + + R+ ASY N+Y+ NG +I +FGD++
Sbjct: 254 DPFHLAALGTYDRLLAEGLTVEVIPEPHRRRIKSLDFVASYANYYVCNGAVIAAEFGDRE 313
Query: 259 WDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
D A L++ +P E+V + +GGG IHC TQQ PA+
Sbjct: 314 ADEIARAALARHYPGREIVTLNVDPLGEMGGG-IHCATQQMPAV 356
>gi|384412631|ref|YP_005621996.1| Agmatine deiminase [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|335933005|gb|AEH63545.1| Agmatine deiminase [Zymomonas mobilis subsp. mobilis ATCC 10988]
Length = 326
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 142/343 (41%), Gaps = 72/343 (20%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAIS-KFEPVTVCASAAQ 70
Y PAEW PH W+G+P W +D AQ A A++ + E V AA
Sbjct: 3 YHQPAEWMPHDAVWIGFPSDASL---WLEDLEPAQAEVVAFAKAVAAQGEGEKVYLVAAH 59
Query: 71 WENARSQLP---ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSW 127
E A + +I VI W RD P V + K A + FN W
Sbjct: 60 KEAADQAVKMAGSDIEVICHPFGDIWLRDNAPLFV---------KEGDKKALALFRFNGW 110
Query: 128 GGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
GG + D + R + LP + VLEGGSI DG G +TTEECLLN N
Sbjct: 111 GG-----KYNLDGDQTIGRDLAKDTALPVLEKNWVLEGGSIDGDGHGLVVTTEECLLNPN 165
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAK--PRLAG------------- 232
RNP L++G I L+ LG +++WL +GL DG R G
Sbjct: 166 RNPELSRGDIARHLRNDLGYDRVLWLRKGLHNDHTDGHVDNLARFVGENHLVVPIATDQD 225
Query: 233 ---------------------TRL-------------AASYVNFYIANGGIITPQFGDKK 258
TR+ ASY+NFYI N ++ P +G K
Sbjct: 226 DPNREVYDQAAQIATEFGVKVTRIPSTGRITIDDEVVPASYMNFYIGNKVVVVPVYGAKN 285
Query: 259 WDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
D V+ L FP +VV + A I+ GGG+ HCI+QQ PA
Sbjct: 286 -DSAIVQALEALFPSRKVVALP-AGHILTGGGSFHCISQQWPA 326
>gi|283780251|ref|YP_003371006.1| Agmatine deiminase [Pirellula staleyi DSM 6068]
gi|283438704|gb|ADB17146.1| Agmatine deiminase [Pirellula staleyi DSM 6068]
Length = 352
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 112/217 (51%), Gaps = 19/217 (8%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N PA GY PAEWEP + W+ WP E +W FA++ A+++F+ V
Sbjct: 5 NELPAQLGYRWPAEWEPQASVWVSWPRNVE---SWPGKFEPVPGEFAQLVRAMAQFQRVN 61
Query: 64 VCAS----AAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
+ A AQ E+ +P N+ + ++ N +W RD GPT + + A
Sbjct: 62 INAGRPEVMAQAESLVGNVP-NVFLHDIPTNDAWCRDHGPTFLTSDRDLPP-------AL 113
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTT 179
+DW +N+WGG Y + D +V KI + F ++LEGG+I +G GT LTT
Sbjct: 114 VDWQYNAWGGK----YPPFDFDNEVPGKIAKIQGRHVFTPGIILEGGAIDGNGRGTLLTT 169
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG 216
CLLN+NRNPHL + E L+ YLGV KI+W+ G
Sbjct: 170 RSCLLNENRNPHLDQAATEQYLRDYLGVQKILWMTGG 206
>gi|260220568|emb|CBA28238.1| Putative agmatine deiminase [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 383
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 110/214 (51%), Gaps = 18/214 (8%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHA-QRVFAKVATAISKFEP 61
+ TP+ + MP E EPH++ WM + LD W L A Q+ A +A +I++FEP
Sbjct: 42 LAATPSPAAWRMPDEAEPHARTWMAFGAH---LDIWGRKLLPAVQQGLANIAMSIARFEP 98
Query: 62 VTVCASAAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
V++ A L + +I+ ++ W RD+GP V N + A +
Sbjct: 99 VSMLVRPNDMARASELLKGSRVELIDQMVDDFWVRDSGPVFVTNHQG--------QKAAV 150
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
D+NFN WG + D +VA + + R S+VLEGG I VDG GT + TE
Sbjct: 151 DFNFNGWGKKQKHPH-----DAKVAAFVADRAGVARLKTSLVLEGGGIEVDGHGTAIITE 205
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLP 214
C+LN NRNP ++K E ELK LG+ KI+WLP
Sbjct: 206 SCVLNANRNPGVSKTDCEAELKRLLGLEKILWLP 239
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 227 KPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIV 286
+ R AG AA Y+NFY+ NG +I P+FGDKK D A L FPK E V + +
Sbjct: 309 RERYAGKDFAAGYINFYVCNGAVIAPEFGDKKADANARDTLKDLFPKRETVQLN-IDGVA 367
Query: 287 LGGGNIHCITQQQPAI 302
GGG IHC TQQ+PA+
Sbjct: 368 AGGGGIHCTTQQEPAV 383
>gi|332185359|ref|ZP_08387107.1| porphyromonas-type peptidyl-arginine deiminase family protein
[Sphingomonas sp. S17]
gi|332014337|gb|EGI56394.1| porphyromonas-type peptidyl-arginine deiminase family protein
[Sphingomonas sp. S17]
Length = 320
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 140/336 (41%), Gaps = 68/336 (20%)
Query: 15 PAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENA 74
PAEW PH+ W+G+P E + + A FA+ A + E V + A+ + +A
Sbjct: 4 PAEWAPHAAVWIGFPSHPELWEEDLEPAREEVLAFARAVHADGRGERVILVAADGEAADA 63
Query: 75 RSQLPENI-RVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
+ N+ V+ W RDTGP IV SA + FN WGG
Sbjct: 64 ARAMAGNVADVVVQPFGDIWLRDTGP-IVTGDGSARL-----------FQFNGWGG---- 107
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
D D V ++ L VLEGG+I DG G +TT +CLLN NRNP L
Sbjct: 108 -KYDLPGDDTVGGRLAEDRGLAATACDWVLEGGAIDGDGTGLVVTTRQCLLNPNRNPELD 166
Query: 194 KGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAK--PRLAG-TRLA-------------- 236
+ IE L LG+ +++WL GL DG R G R+A
Sbjct: 167 EATIEQRLAEDLGLTRVVWLGDGLLNDHTDGHVDNLARFVGPNRVAIPEAAENDPNWQVY 226
Query: 237 -------------------------------ASYVNFYIANGGIITPQFGDKKWDGEAVR 265
ASY+NFYI N ++ P +G D V
Sbjct: 227 AAAQRTAKAAGLDVVTIPSPGRVLRDEEIVPASYMNFYIGNAAVVVPIYGTDN-DEAGVA 285
Query: 266 VLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
+ FP +VVG+ RA I+ GGG+ HCI+QQ PA
Sbjct: 286 AIQAIFPDRQVVGL-RADAILTGGGSFHCISQQIPA 320
>gi|403528733|ref|YP_006663620.1| agmatine deiminase AguA [Arthrobacter sp. Rue61a]
gi|403231160|gb|AFR30582.1| putative agmatine deiminase AguA [Arthrobacter sp. Rue61a]
Length = 379
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 128/275 (46%), Gaps = 20/275 (7%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAE PH + WM +P L + A A + VA A+++FEPVT+ ++ E
Sbjct: 32 MPAETAPHERTWMAFPRTGLTLGHDAASAEEAYSAWTAVAHAVAEFEPVTMVVDPSERER 91
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG-IDWNFNSWGGVDD 132
A L I IE ++ W RD GPT V++ + P V G +DW FN WG
Sbjct: 92 AARMLGSGIEQIEAPLDEFWMRDVGPTFVLDD-------ERPGVLGAVDWIFNGWGA--- 141
Query: 133 GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
+ +W +AR + +V EGG+IHVDGEGT L TE L+ RNP+
Sbjct: 142 PAWSEWQKSAGMARFVAGKAGAELVSSLLVNEGGAIHVDGEGTVLVTETVQLDPGRNPYA 201
Query: 193 TKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIIT- 251
K +E EL +G K+IW+PRGL D GTR V G I+
Sbjct: 202 DKAAVEAELARTIGATKVIWVPRGLTRDYED-------LGTRGHIDMVATLPTPGRILLH 254
Query: 252 PQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIV 286
Q + D E R L QAF + + ++ EIV
Sbjct: 255 SQTNPEHPDYEVSRTL-QAFLETQTDAADKPFEIV 288
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 18/142 (12%)
Query: 169 HVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGV--------MKIIWLPRGLFGM 220
H+D T T LL+ NP ++ L+A+L +I+ LP
Sbjct: 238 HIDMVATLPTPGRILLHSQTNPEHPDYEVSRTLQAFLETQTDAADKPFEIVPLPAPETLR 297
Query: 221 IHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIE 280
DG + SYVN + NGG+I +G+++ D A +L++A+P VV ++
Sbjct: 298 DEDG---------FVDWSYVNHLVVNGGVIACGYGEERADSLAAEILAEAYPGRRVVTVD 348
Query: 281 RAREIVLGGGNIHCITQQQPAI 302
AR I+ GG IHCITQQQP +
Sbjct: 349 -ARPILARGGGIHCITQQQPRL 369
>gi|427722025|ref|YP_007069302.1| agmatine deiminase [Leptolyngbya sp. PCC 7376]
gi|427353745|gb|AFY36468.1| agmatine deiminase [Leptolyngbya sp. PCC 7376]
Length = 366
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 128/246 (52%), Gaps = 42/246 (17%)
Query: 8 ALHGYL-MPAEWEPHSQCWMGWPVRYERLDNWRDDALHA-QRVFAKVATAISKFEPVTVC 65
A+ G L MP E PH++ WM + V E + W + A +R ++ATAI+K+EPV++
Sbjct: 18 AVDGSLFMPDEGAPHARTWMAF-VANEYI--WTRKQIPAVKRDLVRIATAIAKYEPVSML 74
Query: 66 ASAAQWENA--------RSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKV 117
S A R Q P I +IE + W RDTGPT V++ K
Sbjct: 75 VSPEDMAEAQKLLGDLTRYQYP--IELIECRTDDLWVRDTGPTFVLDSEG--------KK 124
Query: 118 AGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCL 177
G+++NFN WGG ++ S D +VA I + P ++VLEGGS +DG GT +
Sbjct: 125 YGVNFNFNGWGG-----KQEHSFDARVADFITNQANATIIPSNIVLEGGSFEIDGHGTAI 179
Query: 178 TTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAA 237
T+ +LN NRNP++++ ++E EL+ LG+ K+IWL DG + G +
Sbjct: 180 LTKSAVLNDNRNPNVSQTEVEKELERLLGIQKVIWL---------DG-----IKGKDITD 225
Query: 238 SYVNFY 243
+V+FY
Sbjct: 226 GHVDFY 231
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 235 LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPK--YEVVGIERAREIVLGGGNI 292
AA Y+ +Y+ NG +I +F D+ D A +++QAFP E + I+ I GGG+I
Sbjct: 294 FAAGYIGYYLCNGAVIMQKFWDEVADQNAKEIIAQAFPDRVIEQIAID---AIASGGGSI 350
Query: 293 HCITQQQP 300
HC TQQ+P
Sbjct: 351 HCATQQEP 358
>gi|56552265|ref|YP_163104.1| agmatine deiminase [Zymomonas mobilis subsp. mobilis ZM4]
gi|4378847|gb|AAD19715.1| unknown [Zymomonas mobilis subsp. mobilis ZM4]
gi|56543839|gb|AAV89993.1| Agmatine deiminase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 326
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 141/343 (41%), Gaps = 72/343 (20%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAIS-KFEPVTVCASAAQ 70
Y PAEW PH W+G+P W +D AQ A A++ + E V AA
Sbjct: 3 YHQPAEWMPHDAVWIGFPSDASL---WLEDLEPAQAEVVAFAKAVAAQGEGEKVYLVAAH 59
Query: 71 WENARSQLP---ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSW 127
E A + +I VI W RD P V + K A + FN W
Sbjct: 60 KEAADQAVKMAGSDIEVICHPFGDIWLRDNAPLFV---------KEGDKKALALFRFNGW 110
Query: 128 GGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
GG + D + R + LP + VLEGGSI DG G +TTEECLLN N
Sbjct: 111 GG-----KYNLDGDQTIGRDLAKDTALPVLEKNWVLEGGSIDGDGHGLVVTTEECLLNPN 165
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAK--PRLAG------------- 232
RNP L++G I L+ LG +++WL +GL DG R G
Sbjct: 166 RNPELSRGDIARHLRNDLGYDRVLWLRKGLHNDHTDGHVDNLARFVGENHLVVPIATDQD 225
Query: 233 ---------------------TRL-------------AASYVNFYIANGGIITPQFGDKK 258
TR+ ASY+NFYI N ++ P +G K
Sbjct: 226 DPNREVYDQAAQIATEFGVKVTRIPSTGRITIDDEVVPASYMNFYIGNKVVVVPVYGAKN 285
Query: 259 WDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
D V+ FP +VV + A I+ GGG+ HCI+QQ PA
Sbjct: 286 -DSAIVQAFEALFPSRKVVALP-AGHILTGGGSFHCISQQWPA 326
>gi|336399609|ref|ZP_08580409.1| agmatine deiminase [Prevotella multisaccharivorax DSM 17128]
gi|336069345|gb|EGN57979.1| agmatine deiminase [Prevotella multisaccharivorax DSM 17128]
Length = 358
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 150/363 (41%), Gaps = 81/363 (22%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA---- 66
+ +PAEWEP + WP + +W + + AI E V +
Sbjct: 5 SFYLPAEWEPQDGIMLTWPAPHT---DWAPYLNSITNTYVALVKAILTHERVIIATEDPL 61
Query: 67 -SAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
+A E + E I + +N +W RD GP +VN + S + +D+ FN
Sbjct: 62 HTATILEKGGCAM-ERINLYSCLINDTWSRDHGPLTLVNPADGS-------MRMLDFRFN 113
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERL--PRFPHS-MVLEGGSIHVDGEGTCLTTEEC 182
WG DW D + +K+ S R H +LEGGSI DG+GT TT +C
Sbjct: 114 GWGE-----KFDWQRDNAITQKLFSLHAFNAERESHDDFILEGGSIESDGKGTIFTTAQC 168
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRG-LFGMIHDG----------------- 224
LL +RN L++ IE +L L ++IW+ G L G DG
Sbjct: 169 LLAPHRNQPLSQQAIEEKLCKLLHAQRVIWIHHGNLIGDDTDGHIDTIVRACPDNTLIYV 228
Query: 225 --------------------EAKPRLAGT------------------RLAASYVNFYIAN 246
+A + GT RL A+Y NF I N
Sbjct: 229 SCDDKTDEQYADFQALDAELQALQTMEGTHYRLLRLPMPDRMEFDGERLPATYANFLIIN 288
Query: 247 GGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAIPTNA 306
G +I P +G K+ D EA+ ++QAFP+ E++ I+ A IV G+IHC+T Q P
Sbjct: 289 GAVIVPIYGQKEKDEEALTTIAQAFPEREIIPID-ASVIVRQHGSIHCLTMQIPHSDRTR 347
Query: 307 AKL 309
A L
Sbjct: 348 ANL 350
>gi|387789880|ref|YP_006254945.1| peptidylarginine deiminase-like protein [Solitalea canadensis DSM
3403]
gi|379652713|gb|AFD05769.1| peptidylarginine deiminase-like enzyme [Solitalea canadensis DSM
3403]
Length = 358
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 118/230 (51%), Gaps = 23/230 (10%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
+N PA GY PAEW H+ W+ WP + +W ++A+ A+++ E V
Sbjct: 15 INTLPA--GYHFPAEWAKHTATWLSWP---HKEASWPGKIDSIYPIYAQFIKAVAEGEQV 69
Query: 63 TVCASAAQWE-NARSQLPEN------IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAP 115
+ + Q + A SQL + + N +W RD GP ++N +
Sbjct: 70 YINVNDEQMKVFATSQLEKQGVDLSKVSFFIHPTNDAWCRDHGPAFLINPTEK------- 122
Query: 116 KVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGT 175
K +DW +N+WGG Y + LD + +I +P + +V+EGGS+ +G GT
Sbjct: 123 KKLIVDWGYNAWGG----KYPPFDLDDVIPTRIAKHYDIPVYYPGIVMEGGSVDFNGAGT 178
Query: 176 CLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGE 225
LTT CLLN+NRNPHL +GQIE+ L+++ GV +++WL G+ G DG
Sbjct: 179 VLTTTACLLNENRNPHLNQGQIEDYLRSFYGVEQVLWLGDGIVGDDTDGH 228
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 48/69 (69%), Gaps = 2/69 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RL ASY NFYI+N ++ P + K D A+ +L++ FP +V+G++ + +I+ G G+ H
Sbjct: 292 RLPASYANFYISNAAVVVPTYRSKN-DQLALDILTKCFPDRKVIGLD-STDIIWGLGSFH 349
Query: 294 CITQQQPAI 302
C++QQ+PA+
Sbjct: 350 CLSQQEPAV 358
>gi|22297655|ref|NP_680902.1| hypothetical protein tlr0111 [Thermosynechococcus elongatus BP-1]
gi|22293832|dbj|BAC07664.1| tlr0111 [Thermosynechococcus elongatus BP-1]
Length = 341
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 147/357 (41%), Gaps = 89/357 (24%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+ PAEW PH CW+ +P D W + + FA + AI+ +PVT Q
Sbjct: 4 FFRPAEWLPHRACWLAFP---SHEDLWGELLPQVRFEFAALCRAIADPDPVTGQCRGEQL 60
Query: 72 E----------NARSQLPE-NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
+ A S L + N + +++ W RDT P ++N++ P
Sbjct: 61 KILVLDETGKATAHSYLSDLNPQFYQLTFGDIWLRDTAPVGLINEAGERRLLCLP----- 115
Query: 121 DWNFNSWGGVDDGCYRDWSL--DLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLT 178
FN WG + + L D +A ++ +P + LEGG+I VDGEGTCLT
Sbjct: 116 ---FNGWG-------KKYQLAGDSDLAIRLALLMGIPYGSVPLFLEGGAIEVDGEGTCLT 165
Query: 179 TEECLLNKNRNPHLTK---------------------GQIENELKAYLGVMKIIWLPRGL 217
T +CLLN NRNP+L+ G + + ++ + P +
Sbjct: 166 TRQCLLNPNRNPYLSSAEVEARLKPALGVSKILWIESGLVNDHTDGHIDTLVRFVAPATV 225
Query: 218 FGMIHDGEAKPRL-----------------------------------AGTRLAASYVNF 242
M+ + P G L ASYVNF
Sbjct: 226 VCMLAESPEDPNCDVLRTIYEQLQTLTDAKGRSLEVIPVPSPGRVTSQKGEILPASYVNF 285
Query: 243 YIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQ 299
YIAN ++ P +G + D +AV +++ FP +G+ AR I+ GGG HCITQQ+
Sbjct: 286 YIANTTVVVPTYGVEA-DAKAVEAIAKLFPSRRTIGLP-ARTILEGGGAFHCITQQE 340
>gi|302890409|ref|XP_003044089.1| hypothetical protein NECHADRAFT_99457 [Nectria haematococca mpVI
77-13-4]
gi|256725008|gb|EEU38376.1| hypothetical protein NECHADRAFT_99457 [Nectria haematococca mpVI
77-13-4]
Length = 420
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 109/218 (50%), Gaps = 19/218 (8%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDAL--HAQRVFAKVATAISKFEP 61
N P + MP EW HSQ WP + D+A+ A+ + ++ AI++FEP
Sbjct: 78 NAQPPKTRFYMPPEWAKHSQTITVWP----DFASIPDEAILRDARSEISAISNAIARFEP 133
Query: 62 VTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGID 121
VT+ E AR + EN+ V + + W RDTGP IV N S S AG+
Sbjct: 134 VTMYTKPQNVEKARDTVSENVTVRPLEASQLWVRDTGPIIVKNLSDDSR-------AGLS 186
Query: 122 WNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
+FN WG + D +VA IL+ + F EGG VDG+GT L TE
Sbjct: 187 LSFNYWGD-----KLESQGDEEVASGILNDMGVNAFTAGFRAEGGGFEVDGQGTLLATES 241
Query: 182 CLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
++N NRNP L+K IE + K YLG+ K IWL RG+ G
Sbjct: 242 AIINPNRNPSLSKSDIEAQFKEYLGIDKTIWL-RGIKG 278
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 237 ASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCIT 296
ASY N+ + NGGII P+FG K D +A+ + Q FP EVV ++ LGGG IHC T
Sbjct: 356 ASYANYLLVNGGIIIPRFGVGKADDDALELFKQCFPDREVVQVDINTVPKLGGG-IHCST 414
Query: 297 QQQPAI 302
QQ P I
Sbjct: 415 QQVPLI 420
>gi|344344866|ref|ZP_08775725.1| Agmatine deiminase [Marichromatium purpuratum 984]
gi|343803560|gb|EGV21467.1| Agmatine deiminase [Marichromatium purpuratum 984]
Length = 344
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 146/355 (41%), Gaps = 85/355 (23%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV-TVCASAAQWE 72
+PAEWEP S + WP ++ D W D + ++A++A IS FEPV VC
Sbjct: 4 LPAEWEPQSGVMLTWP--HDETD-WVDQLAAVETLYAELAARISAFEPVLIVCRDPDHAT 60
Query: 73 NARSQL------PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
R++ E +R+ N +W RD GP V+ +G P + +D+ FN
Sbjct: 61 AVRTRCEQAGAETERLRLATAPSNDTWARDHGPITVI------TGRGRPLL--LDFRFNG 112
Query: 127 WGGVDDGCYRDWSLDLQVARKILSTERLPRF---PHSMVLEGGSIHVDGEGTCLTTEECL 183
WGG LD ++ R + +V+EGG++ DG GT L L
Sbjct: 113 WGG-----KYPAGLDNRITRAVADQGTFGDCELEKCELVVEGGALETDGRGTLLAVSRTL 167
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG------------------------ 219
L+ +RNP + IE L LG+ +WL G
Sbjct: 168 LDPHRNPDHQRADIEQALAIRLGIRHFLWLEHGAISGDDTDGHIDTLVRFCAPDTLCYAR 227
Query: 220 --------------------MIHDGEAKP-RLA------------GTRLAASYVNFYIAN 246
+ D E +P RL RL A Y NF + N
Sbjct: 228 SNDPEDIDHPELAAMERELQALRDPEGRPYRLVPLPSPRPVYDEDDERLPAGYANFLVVN 287
Query: 247 GGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
G ++ P + D D EA+ VL + FP EV+ I+ AR ++ GG++HCIT Q PA
Sbjct: 288 GAVLVPVYDDPA-DAEALAVLGECFPDREVIPID-ARPLIRQGGSLHCITMQLPA 340
>gi|255321556|ref|ZP_05362714.1| putative agmatine deiminase [Campylobacter showae RM3277]
gi|255301412|gb|EET80671.1| putative agmatine deiminase [Campylobacter showae RM3277]
Length = 330
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 145/334 (43%), Gaps = 69/334 (20%)
Query: 16 AEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENAR 75
AEWE ++ P + D+ L A + ++ AI F+ V + + R
Sbjct: 5 AEWEKQELIFLSLPHENTDWKPYLDEILDA---YERLVAAIVPFQKVVLICPDERIFRER 61
Query: 76 SQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCY 135
+N+ +++ + +W RD G V GA K+ D+ FN+WGG +
Sbjct: 62 FAKFDNVEFVKIDTDDTWIRDYGMIDV------QDGA---KIVSYDFKFNAWGGKFESS- 111
Query: 136 RDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKG 195
+D +++L++A++ S R +VLEGGSI +G GT LTTE+CLLN NRN HL K
Sbjct: 112 KDNAVNLELAKRFKSDLR----SIDLVLEGGSIDFNGHGTLLTTEKCLLNDNRNSHLNKE 167
Query: 196 QIENELKAYLGVMKIIWLPRGL-------------------------------------- 217
QIE LK G+ ++IWL G
Sbjct: 168 QIEARLKELFGLRRVIWLKNGFIKGDDTDSHVDTLARFIAPDTIAYASCDDPTDEHFEEL 227
Query: 218 -----------FGMIHDGEAKPRLAG-TRLAASYVNFYIANGGIITPQFGDKKWDGEAVR 265
F ++ K + G RL +Y NF NG +I P +GD D +
Sbjct: 228 VAMKKELENTGFKLVPLPLPKAKFYGGKRLGCTYANFIFINGAVIVPTYGDDN-DKIVLE 286
Query: 266 VLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQ 299
L+Q P ++++G++ + V G++HC +Q +
Sbjct: 287 RLAQELPNHKIIGVD-SLVFVRQNGSLHCSSQNK 319
>gi|264678337|ref|YP_003278244.1| peptidyl-arginine deiminase [Comamonas testosteroni CNB-2]
gi|262208850|gb|ACY32948.1| Porphyromonas-type peptidyl-arginine deiminase [Comamonas
testosteroni CNB-2]
Length = 365
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 118/226 (52%), Gaps = 21/226 (9%)
Query: 3 MNGTPALHG--YLMPAEWEPHSQCWMGWPVRYERLDNW-RDDALHAQRVFAKVATAISKF 59
M+G PAL + MP E E HS WM + D W + AQ A++A AI+
Sbjct: 24 MHGLPALAAGSWRMPDEGERHSATWMAFGAND---DVWGKRLKSGAQANLARIAQAIASV 80
Query: 60 EPVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
EPV + + ++ A ++++ ++ W RDTGP V K + S +AG
Sbjct: 81 EPVHMLVNEEDYDLAARLCGNKVKLVVQPIDDLWMRDTGPVFV--KEAGGS------LAG 132
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTT 179
+++NFN WG D Y D D VA + +P S+VLEGG I VDG GT + T
Sbjct: 133 VNFNFNGWGEKQD--YED---DALVAGFVAGRAGVPVLESSLVLEGGGIEVDGHGTAIIT 187
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGM-IHDG 224
E C+LN NRNP + K Q E EL+ LG+ K+IWLP G+ G I DG
Sbjct: 188 ESCVLNANRNPGVGKAQCEKELRRVLGIEKVIWLP-GIAGQDITDG 232
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 213 LPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFP 272
LP + M +P+ AA Y+NFY+ NG ++ P+FG + D +L + FP
Sbjct: 278 LPLKVVTMPGPDHVRPQYENKDFAAGYINFYVCNGAVLCPEFGHAQADRNTKAILREQFP 337
Query: 273 KYEVVGIERAREIVLGGGNIHCITQQQPA 301
++V + I GGG IHC TQQQPA
Sbjct: 338 GRDIVQLN-IDAIAAGGGGIHCTTQQQPA 365
>gi|115397049|ref|XP_001214116.1| predicted protein [Aspergillus terreus NIH2624]
gi|114192307|gb|EAU34007.1| predicted protein [Aspergillus terreus NIH2624]
Length = 384
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 159/389 (40%), Gaps = 94/389 (24%)
Query: 1 MEMNGTPALHG--YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISK 58
M + L G ++ P EW PH +G+P + + D + +A AIS+
Sbjct: 1 MTIRSNAPLEGGRFVFPPEWHPHIATILGFPSKSSSSELIYTDLCNE---IVDLAAAISE 57
Query: 59 FEPVTVCA------SAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGA 112
FEPV + A +A N + P+ + ++ +++N W RDTGP V + +
Sbjct: 58 FEPVRLHARPEDVPAAQALVNHKLTDPQRVTIVPIAINHCWVRDTGPVYVHDATGELDPN 117
Query: 113 QAPKVAGIDWNFNSWGGV---------DDGCY-------RDWSLDLQVARKILSTERLPR 156
Q I + FN WG DD Y + + AR +++ + LP
Sbjct: 118 QR---LAISFEFNEWGNKNGWTGMEDRDDYIYGPPAMTEEELRENTAFARNVIAADVLPS 174
Query: 157 FPHSMV----LEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKII- 211
+V EGG++ VDG+GT + +E C++ RNP ++ +IE EL LGV K++
Sbjct: 175 PVRQVVPRIRAEGGALVVDGDGTLIISESCMVCNERNPGQSRDEIEAELCRLLGVKKVLW 234
Query: 212 --------------------------------------WLP---------------RGLF 218
WLP RG
Sbjct: 235 CPGRKWLDITDAHLDAEVRFVRPGVVLWSRHHPEAPEEWLPLSHEILDVLKRETDARGRK 294
Query: 219 GMIHD-GEAKPRLA----GTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPK 273
IH E P+L ASY+NFY NGG+I P+FG +++D A + P
Sbjct: 295 LEIHAIDEPHPKLLPIADDDEFVASYLNFYFCNGGLIMPKFGVEEYDRRAKETIQALMPD 354
Query: 274 YEVVGIERAREIVLGGGNIHCITQQQPAI 302
VV R R I L GG IHC+TQQ P +
Sbjct: 355 -RVVRQVRLRAIPLSGGVIHCVTQQVPDL 382
>gi|110637246|ref|YP_677453.1| peptidyl-arginyl deiminase [Cytophaga hutchinsonii ATCC 33406]
gi|110279927|gb|ABG58113.1| agmatine deiminase [Cytophaga hutchinsonii ATCC 33406]
Length = 347
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 117/228 (51%), Gaps = 24/228 (10%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNW--RDDALHAQRVFAKVATAISKFEPVT 63
TPA GY PAEW H W+ WP + +W + D++ Q +A+ I++ E V
Sbjct: 5 TPAQQGYSFPAEWAKHKATWLSWP---HKEASWPGKLDSIFPQ--YAQFIKLIAEGEEVR 59
Query: 64 V-CASAAQWENARSQLPE------NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPK 116
+ A+AA AR + + N+ N +W RD GP +VN + A+ K
Sbjct: 60 INVANAAMEAFARGYIEKAGADMHNVFFHHFPTNDAWCRDHGPAFLVNPA-----AEQKK 114
Query: 117 VAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTC 176
V +DW +N+WGG Y + LD + KI +P F +V+EGGS+ +G GT
Sbjct: 115 VI-VDWGYNAWGG----KYPPYDLDDVIPTKIAQMYNIPVFHPGIVMEGGSVEFNGRGTL 169
Query: 177 LTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LT+ CLLN NRNP ++ QIE L+ Y GV I+WL G+ G DG
Sbjct: 170 LTSTSCLLNPNRNPSKSREQIEEYLEDYYGVEHILWLGEGIVGDDTDG 217
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RL ASY NFYI+N ++ P F DK D A+ +L Q F +V G++ + +I+ G G+ H
Sbjct: 282 RLPASYANFYISNNHVVVPTFRDKN-DEVALEILQQLFTDRKVTGLD-STDIIWGLGSFH 339
Query: 294 CITQQQPA 301
C++QQ+PA
Sbjct: 340 CLSQQEPA 347
>gi|194336135|ref|YP_002017929.1| Agmatine deiminase [Pelodictyon phaeoclathratiforme BU-1]
gi|194308612|gb|ACF43312.1| Agmatine deiminase [Pelodictyon phaeoclathratiforme BU-1]
Length = 349
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 110/224 (49%), Gaps = 22/224 (9%)
Query: 11 GYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTV------ 64
Y MP EW H W+ WP RL+ W VF ++ + +S E V +
Sbjct: 5 SYFMPPEWAFHKATWLSWP---HRLETWPGKFEPIPAVFVEIVSWLSSSEEVHINVLDEA 61
Query: 65 --CASAAQWENA-RSQLPEN-IRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
A + NA QL N + ++ N +W RD GP V + S + +
Sbjct: 62 MELQVLALFRNADHPQLQMNRLFFYQIPTNDAWCRDHGPNFVFRQREGRS-----EKIIL 116
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
+W +N+WG Y + D V KI S + LP +MVLEGGSI V+G G LT+E
Sbjct: 117 NWEYNAWGEK----YTSYEADNAVPEKIASLQHLPLVSPAMVLEGGSIDVNGRGLLLTSE 172
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
CLLN NRNP +++ QIE EL YLGV K++WL G+ G DG
Sbjct: 173 ACLLNPNRNPAMSREQIEQELHHYLGVEKVLWLGDGIVGDDTDG 216
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 230 LAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGG 289
G RL ASY NFYIAN ++ P + + D +A+ +L + FP VVGI+ ++V G
Sbjct: 277 FEGFRLPASYANFYIANTVVLVPTYRCPQ-DQKAIDILQEFFPDRRVVGID-CSDLVWGL 334
Query: 290 GNIHCITQQQPA 301
G IHCIT ++PA
Sbjct: 335 GAIHCITHEEPA 346
>gi|384419614|ref|YP_005628974.1| porphyromonas-type peptidyl-arginine deiminase [Xanthomonas oryzae
pv. oryzicola BLS256]
gi|353462527|gb|AEQ96806.1| porphyromonas-type peptidyl-arginine deiminase [Xanthomonas oryzae
pv. oryzicola BLS256]
Length = 344
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 83/352 (23%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCAS------ 67
PAEWEP S + WP +W + + + + TAI++FEPV +C +
Sbjct: 7 FPAEWEPQSAVLLAWP---HAGTDWAERLADVEETYIALVTAIARFEPVVICVADDDLQI 63
Query: 68 --AAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A+ +AR + +R + + N +W RD+GP + Q +D+ F
Sbjct: 64 YAEARLRSARVDM-TRVRFVIAAYNDTWLRDSGPITL---------RQGTGFRLMDFRFT 113
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
WGG D D + A ++ ++ LEGG+I DG GT LTT +CL
Sbjct: 114 GWGGKFDASLDDQLVSSLDAAQVFVPAQVGTI--DFALEGGAIETDGAGTLLTTWKCL-- 169
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF-------------------GMIHDG-- 224
R+P T+ + ++L +L +++WL G +++ G
Sbjct: 170 HERHPQRTRESLSSDLATWLAQERVLWLDHGYLEGDDTDAHIDTLARFAGPDAIVYQGCD 229
Query: 225 ------EAKPRLAGTRLA-----------------------------ASYVNFYIANGGI 249
+ + GT LA ASY NF I NG +
Sbjct: 230 AAGDSHYTELQAMGTELAALRTADGQPYRLFVLPWADPILDEGRRLAASYANFLIVNGAV 289
Query: 250 ITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
+ P +GD D A VL+QAFP++E+V + R ++ G++HC+T Q PA
Sbjct: 290 LMPAYGDPA-DATAQAVLAQAFPQHEIVPVP-CRALIWQNGSLHCLTMQLPA 339
>gi|385809622|ref|YP_005846018.1| Agmatine deiminase [Ignavibacterium album JCM 16511]
gi|383801670|gb|AFH48750.1| Agmatine deiminase [Ignavibacterium album JCM 16511]
Length = 348
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 148/358 (41%), Gaps = 88/358 (24%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
Y +PAEWE H W+GWP E +W V+ ++ IS+ E V + S+ +
Sbjct: 7 YRLPAEWEKHEATWIGWPANKE---DWPGKFTPIPWVYGEIVRYISRDEKVRIIVSSKSY 63
Query: 72 ENARSQLP-------ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNF 124
+ + +NI + + +W RD GP V ++ + Q + F
Sbjct: 64 KQKAINVLKSVDANFDNIEFFFLKTDRNWLRDAGPQFVKDEKGNTIVVQ--------FKF 115
Query: 125 NSWGGVDDGCYRDWSLDLQVARKILSTERLPRF-----PHSMVLEGGSIHVDGEGTCLTT 179
N+W D+ LD ++ + I +L + +VLEGGSI +G GT +TT
Sbjct: 116 NAWAKYDNH-----KLDSRIPKMISEKLKLKKVIAEHKNSKVVLEGGSIDYNGTGTIITT 170
Query: 180 EECLLNKN---RNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG------------ 224
EECL++ RNP TK E L+ Y GV +IWL +G+ G G
Sbjct: 171 EECLMDNEVQVRNPGFTKKDYEVVLRKYFGVNNVIWLGKGIAGDDTHGHVDDITRFVNRK 230
Query: 225 -------------------EAKPRLAGTRLA------------------------ASYVN 241
E + RL + L ASY N
Sbjct: 231 TIITVIETKANDPNYIPLMENRERLEDSTLEDGSVPEIIEIPMPSPVYFKGQRLPASYAN 290
Query: 242 FYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQ 299
FYI+N ++ P F D D A+ +LS+ F V+GI ++V G G +HC+T +Q
Sbjct: 291 FYISNYAVLVPTFNDPN-DRIALGILSELFEDRPVIGIHSV-DLVWGLGTLHCLTHEQ 346
>gi|88854751|ref|ZP_01129417.1| hypothetical protein A20C1_07808 [marine actinobacterium PHSC20C1]
gi|88815912|gb|EAR25768.1| hypothetical protein A20C1_07808 [marine actinobacterium PHSC20C1]
Length = 365
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 104/207 (50%), Gaps = 11/207 (5%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQW 71
+ MPAE H + WM +P E L + + VA AI++FEPVT+ ++
Sbjct: 3 WTMPAETAEHERTWMAFPREGETLGATAAERERGYSAWTDVAHAIAEFEPVTMVVDPSEM 62
Query: 72 ENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG-IDWNFNSWGGV 130
+R L +I ++E ++ W RD GPT VV+ + P V G +DW FN WG
Sbjct: 63 TRSRRMLDSSIAILEAPLDEFWMRDIGPTFVVDD-------KRPAVLGAVDWIFNGWGAP 115
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
+ +W+ ++AR + + +V EGG HVDGEGT L TE L+ RNP
Sbjct: 116 K---WAEWAKSAEIARFVAAASGAELVSSLLVAEGGGFHVDGEGTVLLTETVQLDPRRNP 172
Query: 191 HLTKGQIENELKAYLGVMKIIWLPRGL 217
K ++E E+ +G +WLPRGL
Sbjct: 173 LADKARVEREMLRTIGATHAVWLPRGL 199
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 165 GGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
G + HVD T + LL+ NP Q+ E++ L + + G I +
Sbjct: 207 GTNGHVDIVATIPSPGRILLHAQPNPEHPDHQVMAEIRQSLESQRDV---AGREWEIVEM 263
Query: 225 EAKPRLAGTR--LAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERA 282
A L + SYVN + N G+I F D D A +L++A+P V ++ +
Sbjct: 264 PAPEVLRDDHGFVDYSYVNHLVVNNGVIGCGFADAAADARAAEILAEAYPGRRVQMVD-S 322
Query: 283 REIVLGGGNIHCITQQQPAIPTNAAKLD 310
REI GG IHCITQQQP +P+ + D
Sbjct: 323 REIFARGGGIHCITQQQPKLPSAGTRAD 350
>gi|377563469|ref|ZP_09792817.1| hypothetical protein GOSPT_025_00160 [Gordonia sputi NBRC 100414]
gi|377529238|dbj|GAB37982.1| hypothetical protein GOSPT_025_00160 [Gordonia sputi NBRC 100414]
Length = 372
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 108/208 (51%), Gaps = 25/208 (12%)
Query: 12 YLMPAEWEPHSQCWM----GWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCAS 67
++MP E + H++ WM G + RL QR A +AT IS+FEPV++ S
Sbjct: 42 WVMPDEGQRHTRTWMAFAAGEAIWGARL------VPEVQRNLAMIATTISRFEPVSMLVS 95
Query: 68 AAQWENARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
+ AR + N+ ++ ++ W RDTGP V ++A G+D+NFN
Sbjct: 96 PDEMGVARELIGGANVELVACPLDDLWIRDTGPVFVKTDTTA---------GGVDFNFNG 146
Query: 127 WGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNK 186
WGG +D D +VA + +VLEGG++ VDGEGT + TE C+LN
Sbjct: 147 WGG-----KQDHGRDSKVADFVARRGGAETVHTDLVLEGGALEVDGEGTAIITESCVLNN 201
Query: 187 NRNPHLTKGQIENELKAYLGVMKIIWLP 214
NRNP +K +E EL LGV K+IWLP
Sbjct: 202 NRNPGWSKADVEGELDRLLGVTKVIWLP 229
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 227 KPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIV 286
+ + A AA Y+NFY+ NG +I PQFG D A L Q FP EVV + I
Sbjct: 299 REQFASDDFAAGYINFYVCNGAVIGPQFGASDTDAAAKDTLQQLFPDREVVQVN-IDGIA 357
Query: 287 LGGGNIHCITQQQPA 301
GGG IHC TQQQPA
Sbjct: 358 AGGGGIHCATQQQPA 372
>gi|260591469|ref|ZP_05856927.1| peptidylarginine deiminase-related protein [Prevotella veroralis
F0319]
gi|260536500|gb|EEX19117.1| peptidylarginine deiminase-related protein [Prevotella veroralis
F0319]
Length = 357
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 159/366 (43%), Gaps = 79/366 (21%)
Query: 5 GTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTV 64
T LHG+ +PAEWEP + WP +E D WR V+ ++A AI++ E + +
Sbjct: 2 NTNKLHGFRLPAEWEPQRAIMLIWP--HEDTD-WRPYLKEITEVYLQMADAITRHEELLI 58
Query: 65 CASAAQWENARSQLPENIRVIEMSM--------NGSWFRDTGP-TIVVNKSSASSGAQAP 115
A R L E++ +M+ N +W RD P T+V NK S G
Sbjct: 59 TARDTDL--VRRLLTEHLTKEQMNQVTLFACDNNDTWARDVAPITLVPNKESNGKGQTN- 115
Query: 116 KVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPH-SMVLEGGSIHVDGEG 174
A +D+ FN WG +D ++ QV L L PH V+EGGSI DG+
Sbjct: 116 --ALLDFCFNGWGE-KFAADKDNRINQQVYEAGLFEGTLE--PHKDFVIEGGSIESDGKH 170
Query: 175 TCLTTEECLLNKNRNPHLTKGQIENELKAYL-GVMKIIWLPRG-LFGMIHDGEA------ 226
T TT CL+ +RN L+K I+ +L+++ + ++WL G L G DG
Sbjct: 171 TLFTTTGCLMAPHRNQPLSKEDIDEKLRSFFPNIEHVVWLDHGKLAGDDTDGHIDTIVRI 230
Query: 227 -------------------------KPRLAGTR------------------------LAA 237
+ +L G R L A
Sbjct: 231 APNDTLLYIRCDDPQDEHYADFHHLEEQLQGLRTSEGKPYHLLPLPMPNAIYDDGERLPA 290
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
++ NF I NG ++ P + + D EA+ + +AFP E++GI+ +R I+ G+IHC+T
Sbjct: 291 THANFLIINGAVLVPTYNQPQKDREAIEQIQRAFPDREIIGID-SRTIIRQHGSIHCLTM 349
Query: 298 QQPAIP 303
Q P P
Sbjct: 350 QLPLSP 355
>gi|404255221|ref|ZP_10959189.1| agmatine deiminase [Sphingomonas sp. PAMC 26621]
Length = 324
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 144/339 (42%), Gaps = 75/339 (22%)
Query: 15 PAEWEPHSQCWMGWPVRYERLDNWRDDALHAQR---VFAKVATAISKFEPVTVCASAAQW 71
PAEW PHS W+G+P E W +D A+ FA+ A + E V + A+ +
Sbjct: 7 PAEWAPHSAVWIGFPSHPEL---WVEDLEPARTEVVAFARAVHAEGRGERVLLVAADDEA 63
Query: 72 ENARSQLPENI-RVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
A + + ++ S W RDT P ++ + S G D+ FN WGG
Sbjct: 64 ATAARAMAGDFAEIVVESFGDIWLRDTAPILLSDGS------------GRDFAFNGWGG- 110
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
D D + R++ ++ VLEGG+I DG G +TT +CLLN NRNP
Sbjct: 111 ----KYDLPGDSDIGRRLAEDRQIAVESCDWVLEGGAIDGDGTGLLVTTRQCLLNPNRNP 166
Query: 191 HLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGE-------------AKPRLAGTR--- 234
L + QIE L +LG +I+WL GL DG A P A
Sbjct: 167 ALDQAQIEQRLHDHLGFAQILWLGDGLMHDHTDGHVDNLARFVAPGVLAIPEAADNDPNW 226
Query: 235 ---------------------------------LAASYVNFYIANGGIITPQFGDKKWDG 261
+ ASY+NFYI N ++ P +G D
Sbjct: 227 LVYQHAAAAAAEMPGIDLVRIPSPGRVLRDEEIVPASYMNFYIGNAAVVVPLYGAPN-DA 285
Query: 262 EAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
AV L FP EVVG+ RA I+ GGG+ HCI+QQ P
Sbjct: 286 AAVAALQALFPGREVVGL-RADAILTGGGSFHCISQQIP 323
>gi|311746308|ref|ZP_07720093.1| peptidyl-arginine deiminase [Algoriphagus sp. PR1]
gi|126576543|gb|EAZ80821.1| peptidyl-arginine deiminase [Algoriphagus sp. PR1]
Length = 357
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 115/226 (50%), Gaps = 20/226 (8%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTV- 64
TP+ GY PAE+ PH+ W+ WP + D+W +++ +++ E V +
Sbjct: 14 TPSELGYYFPAEFAPHASTWLSWP---HKEDSWPGKIHTIYPAYSEFIKIVAQGEKVNIN 70
Query: 65 CASAAQWENARSQLPE---NIRVIEMSM---NGSWFRDTGPTIVVNKSSASSGAQAPKVA 118
A A A QL + N+ I + N +W RD GP ++N ++ K A
Sbjct: 71 VADEAMKAFATKQLVDAGVNLSQINFHLFPTNDAWCRDHGPAFLINPNADE------KKA 124
Query: 119 GIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLT 178
+ WN+N+WG Y LD Q+ +I +P F +V+EGGS+ +G+GT LT
Sbjct: 125 LVKWNYNAWGNK----YPPHDLDNQIPYRIAEHLNIPCFNAGIVMEGGSVEFNGKGTLLT 180
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
+ CLLN+NRNPHL + QIE L + GV I+W+ G+ G DG
Sbjct: 181 SRACLLNENRNPHLIQSQIEKYLCDFYGVHNILWVEDGIVGDDTDG 226
>gi|325955393|ref|YP_004239053.1| agmatine deiminase [Weeksella virosa DSM 16922]
gi|323438011|gb|ADX68475.1| Agmatine deiminase [Weeksella virosa DSM 16922]
Length = 351
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 113/232 (48%), Gaps = 23/232 (9%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
++ P G+ PAEWE H W+ WP + E +W D +A+ +SK E
Sbjct: 4 IDTTKYPKDLGFHFPAEWEEHEATWLSWPHKEE---SWPDRIHLIYPAYAQFIAELSKSE 60
Query: 61 PVTVCA--------SAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGA 112
V + + A + + L + I N +W RD GP +VN+++
Sbjct: 61 IVRINVVDEEMMRFADAHIKKTDAYL-DQIEYFIHPTNDAWCRDHGPAFLVNRATKEKVV 119
Query: 113 QAPKVAGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDG 172
+DW+FN+WGG Y + LD + K+ LP F +++EGG++ +G
Sbjct: 120 -------VDWDFNAWGGK----YPPYDLDDVIPTKVAEKLNLPVFYPQIIMEGGAVDFNG 168
Query: 173 EGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
G LT++ CLLN NRNPHL + QIE L+ Y GV +++W+ G+ G DG
Sbjct: 169 AGAVLTSKSCLLNPNRNPHLNQEQIEEYLRNYYGVSQVLWVDDGIVGDDTDG 220
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 232 GTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGN 291
G RL ASY NFYIAN +I P + K D A+ ++ + FP +VVGI+ + EI+ G G+
Sbjct: 283 GERLPASYANFYIANKSVIVPTYRCDK-DAIALEIIQKCFPDRKVVGID-STEIIWGLGS 340
Query: 292 IHCITQQQPAI 302
HC++QQ+P I
Sbjct: 341 FHCLSQQEPKI 351
>gi|326389171|ref|ZP_08210751.1| peptidyl-arginine deiminase [Novosphingobium nitrogenifigens DSM
19370]
gi|326206402|gb|EGD57239.1| peptidyl-arginine deiminase [Novosphingobium nitrogenifigens DSM
19370]
Length = 356
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 143/354 (40%), Gaps = 77/354 (21%)
Query: 3 MNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPV 62
M T A G+ MP EW P W+G+P E + + A FA A A + E
Sbjct: 24 MTATQASTGWRMPPEWHPQDWLWIGFPHIAEEWSGFIEPAQEQIAAFAN-AVAETGQEVR 82
Query: 63 TVCASAAQWENARSQLPENIRVIEMSMNGS-WFRDTGPTIVVNKSSASSGAQAPKVAGID 121
+ A ARS + + V+E + G W RDTGP +VVN S A+
Sbjct: 83 LIVRDEANAARARSLVSAKV-VLETRVYGDVWLRDTGP-LVVNDGSGGRMARL------- 133
Query: 122 WNFNSWGGV-----DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTC 176
+ FN WGG DD D + A LS R +LEGG++ DG G
Sbjct: 134 FGFNGWGGKYLMPGDDAIGADLA-----ASAGLSATR-----GDWILEGGALDGDGTGLV 183
Query: 177 LTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGE----------- 225
TTE+CLLN NRNPHL++G +E L LG +++WL GL DG
Sbjct: 184 ATTEQCLLNPNRNPHLSRGDLEMRLARDLGFDRVLWLGDGLLNDHTDGHVDNLGRFFAPG 243
Query: 226 --AKPRLAGTR------------------------------------LAASYVNFYIANG 247
A PR G ASY+NF I
Sbjct: 244 RIALPRATGAGDPNAAIYADAVARARDFGVDVVEVPSPGLIEWDGVIQPASYMNFVITTH 303
Query: 248 GIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
+I P FG D + V + FP E +G+ ++ GGG HC +QQ PA
Sbjct: 304 AVIVPIFGSPH-DADGVAAIGALFPGREAIGV-MGDAVLAGGGGFHCSSQQMPA 355
>gi|403715149|ref|ZP_10940934.1| agmatine deiminase [Kineosphaera limosa NBRC 100340]
gi|403210917|dbj|GAB95617.1| agmatine deiminase [Kineosphaera limosa NBRC 100340]
Length = 407
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 115/228 (50%), Gaps = 20/228 (8%)
Query: 9 LHGYLMPAEWEPHSQCWMGWPVRYERLDNW-RDDALHAQRVFAKVATAISKFEPVTVCAS 67
L G MP E E H+ WM + E W RD + A ++ I FEPV +
Sbjct: 50 LVGLRMPDEGEKHTATWMAFAASPE---IWGRDLSEPVLESLALISATIVDFEPVRILVP 106
Query: 68 AAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSW 127
+ A L + + +I + W RDTGPT V AQAP + GID+NFN W
Sbjct: 107 SRFRSQAGRLLDKRVEIIYHEADDLWMRDTGPTFV-------QSAQAPGLRGIDFNFNGW 159
Query: 128 GGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
GG + LD +VA + + +PR +V+EGG++ VDG GT + T C+LN N
Sbjct: 160 GG-----KQAHDLDAKVAAAVCAAASVPRERTELVIEGGALEVDGAGTAIITRSCVLNDN 214
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLPRGLFGM-IHDGEAK--PRLAG 232
RNP T+ Q+E EL LG+ KIIWLP G+ G I DG R AG
Sbjct: 215 RNPGWTQEQVEAELAKLLGLRKIIWLP-GIAGRDITDGHTDFYARFAG 261
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 231 AGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQ-AFP 272
AG AA Y+NFY+ NG +I PQFGD K DG A +L++ +FP
Sbjct: 315 AGDDFAAGYINFYVCNGAVIAPQFGDAKADGRARELLTELSFP 357
>gi|386381316|ref|ZP_10067081.1| peptidyl-arginine deiminase, partial [Streptomyces tsukubaensis
NRRL18488]
gi|385671217|gb|EIF94195.1| peptidyl-arginine deiminase, partial [Streptomyces tsukubaensis
NRRL18488]
Length = 348
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 17/198 (8%)
Query: 16 AEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENAR 75
AEWE H++ +M WP W +D + ++ A++A A+ ++E V + A Q + A+
Sbjct: 18 AEWESHTRTFMSWPALTS---VWEEDLPYVRKDIARIARAVGEYEAVVMMARPDQVKAAQ 74
Query: 76 SQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCY 135
+ VI ++++ W RDT P V Q KV G+D+NFN WG
Sbjct: 75 RACGSQVEVIPLAVDDLWARDTVPVFV---------EQGGKVTGVDFNFNGWGD-----K 120
Query: 136 RDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKG 195
++ + D V RK+L + R +V EGGS DGEGT L TE ++N NRNP ++
Sbjct: 121 QEHTNDALVGRKLLPEYGILRVQAPLVSEGGSFETDGEGTLLITESSIVNVNRNPGKSRD 180
Query: 196 QIENELKAYLGVMKIIWL 213
+IE ELK LG+ K++WL
Sbjct: 181 RIEAELKELLGMEKVVWL 198
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 232 GTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGN 291
G ASY NFYIAN + P+FGD+K D A ++ + FP +VV + + GGG
Sbjct: 276 GEDFLASYANFYIANDSVFLPRFGDRKADDRARGIMREHFPGRDVVLVP-IDTVASGGGG 334
Query: 292 IHCITQQQPAIP 303
IHC T QP P
Sbjct: 335 IHCATHDQPGKP 346
>gi|255691890|ref|ZP_05415565.1| peptidyl-arginine deiminase family protein [Bacteroides finegoldii
DSM 17565]
gi|260622443|gb|EEX45314.1| hypothetical protein BACFIN_06959 [Bacteroides finegoldii DSM
17565]
Length = 371
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 152/352 (43%), Gaps = 84/352 (23%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
+PAEW S + WP +W Q+ F +A I+K E + + E
Sbjct: 36 LPAEWHTQSGIQLTWP---HAGTDWAYMLEEVQQCFINIAQEIAKRELLLIVTPEP--EK 90
Query: 74 ARSQLP-----ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWG 128
+ Q+ N+R ++ + N +W RD G +++ + S +D+ FN WG
Sbjct: 91 VKQQITATVNMNNVRFLQCATNDTWARDHGAITMIDTGTPSL---------LDFAFNGWG 141
Query: 129 GVDDGCYRDWSLDLQVARKILSTERLP-RFPHSM--VLEGGSIHVDGEGTCLTTEECLLN 185
LD Q+ R+ + T L ++ + + +LEGGSI DG GT LTT ECLL+
Sbjct: 142 -----LKYASELDNQITRQAVETGALNGQYVNRLDFILEGGSIESDGMGTLLTTSECLLS 196
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPRGL---------------------------- 217
NRN L + +IE+ LK+ + +++WL G
Sbjct: 197 SNRNERLNQVEIEDYLKSVFHLQQVLWLDHGYLAGDDTDSHIDTLARFCSTDTIAYVKCE 256
Query: 218 ------FGMIHDGEAKPR----LAGT------------------RLAASYVNFYIANGGI 249
+G +H E + + LAG RL A+Y NF I N I
Sbjct: 257 DKEDEHYGALHAMEEQLKTFRTLAGAPYRLLALPMADKIEEDGERLPATYANFLILNDAI 316
Query: 250 ITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
+ P + + D +A VL QAFP ++VGI+ R ++ G++HC+T Q P
Sbjct: 317 LYPTYNQPQNDKKAGEVLQQAFPGRQIVGID-CRALIKQHGSLHCVTMQYPT 367
>gi|329849479|ref|ZP_08264325.1| agmatine deiminase [Asticcacaulis biprosthecum C19]
gi|328841390|gb|EGF90960.1| agmatine deiminase [Asticcacaulis biprosthecum C19]
Length = 343
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 145/350 (41%), Gaps = 72/350 (20%)
Query: 13 LMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKF--EPVTVCASAAQ 70
++PAEWE H W+G+P W++D + AQ A +A +++ E V + +
Sbjct: 4 IVPAEWEAHKAIWLGFPSHGNL---WQEDLIPAQAEVAALARVLAEMGDEHVKLMVMGDE 60
Query: 71 WENARSQLPENIRVIEM---SMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSW 127
A L +++ +E+ WFRDTGP V + + QA V + N W
Sbjct: 61 ARAAAETLLGDVKKVEIVDGRFGDIWFRDTGPIYVADDADEDDLHQALPVG---FQNNGW 117
Query: 128 GGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
GG D +VAR+I + +LEGG++ DG GT LTT +CLLN N
Sbjct: 118 GG-----KYHLKFDDEVARQISEADGFASTTEDFILEGGALDHDGRGTVLTTRQCLLNPN 172
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAK--PRLAGTRLAASYVNF--- 242
RNP T+ E L LGV K+IWL G+ DG R + A V F
Sbjct: 173 RNPGWTQSLAEQALFQSLGVRKVIWLDDGMLNDHTDGHVDNLARFVAPGVVACPVAFGRD 232
Query: 243 ------YIANGGIITPQFGDK----------------KWDGE------------------ 262
Y A +++ Q + DGE
Sbjct: 233 DPNADVYDATAKLLSAQTDARGRPIQVVRIPSPGKVTDEDGEIIPASHMNFLIANDCVVV 292
Query: 263 ----------AVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
AV L FP+ +V+G+ +R I+ GGG+ HCI+QQ P I
Sbjct: 293 PIYEDRPGELAVEALQSLFPERQVLGLS-SRAILTGGGSFHCISQQVPLI 341
>gi|399064074|ref|ZP_10747148.1| peptidylarginine deiminase-like enzyme [Novosphingobium sp. AP12]
gi|398031245|gb|EJL24637.1| peptidylarginine deiminase-like enzyme [Novosphingobium sp. AP12]
Length = 337
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 147/354 (41%), Gaps = 70/354 (19%)
Query: 1 MEMNGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFE 60
M++ T AL G+ +P EW P W+G+P + D A FA A A S E
Sbjct: 1 MQLQVTFALAGFSLPPEWHPQDWIWIGFPHDPVEWPGFLDMAQEQMAAFAS-AVAESGQE 59
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
+ A A + + + + W RDTGP + +++ A +
Sbjct: 60 VRLLVRDEANRARASELVSDKVTLETRRYGDVWLRDTGPLVTMDQHGARKAMR------- 112
Query: 121 DWNFNSWGG--VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLT 178
+ FN WGG + DG D ++ ++ L +LEGG++ DG G T
Sbjct: 113 -FGFNGWGGKYLMDG-------DQEIGEELAREAGLEVELADWILEGGALDGDGTGLVAT 164
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF-------------------- 218
T +CLLN NRNPHLT+ +E L+ LG +++WL GL
Sbjct: 165 TGQCLLNPNRNPHLTQADLEMRLERDLGYDRVLWLGDGLINDHTDGHVDNLARFVAPNVL 224
Query: 219 -------------GMIHDGEAKPRLAGTRLA-----------------ASYVNFYIANGG 248
+ D +A+ G +A ASY+NF I +
Sbjct: 225 ALPRATGHDDPNAAIYADAKARAEAMGVTVAEVPSPGRVESEGGRIEPASYMNFAITSKL 284
Query: 249 IITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
++ P +G D E V ++ FP + VG+ RA ++ GGG+ HC +QQ P++
Sbjct: 285 VVVPTYGTAH-DAEGVAAIAALFPDRDTVGV-RADAVLAGGGSFHCSSQQMPSV 336
>gi|333915252|ref|YP_004488984.1| Agmatine deiminase [Delftia sp. Cs1-4]
gi|333745452|gb|AEF90629.1| Agmatine deiminase [Delftia sp. Cs1-4]
Length = 385
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 126/252 (50%), Gaps = 26/252 (10%)
Query: 8 ALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALH-AQRVFAKVATAISKFEPVTVCA 66
+L + MP E +PH WM + E++ W L A+ A +A AI+ FEPV +
Sbjct: 44 SLETWHMPDEGDPHQSTWMSFGPS-EKV--WGRRLLEPAREHLAGIARAIAAFEPVNMLV 100
Query: 67 SAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
++ A +++ ++ W RDTGP + V + + +G+ ++AG+D+NFN
Sbjct: 101 RERDYDLAARLCGNRVKLHVQPVDDLWMRDTGP-VFVRQLGSGTGSSKGELAGVDFNFNG 159
Query: 127 WGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNK 186
WG D + + D +VA + + +VLEGG I VDG+GT L TE C+LN
Sbjct: 160 WG--DKQAHDN---DAEVAGFVTEAANVRYLETELVLEGGGIEVDGQGTALITESCVLNP 214
Query: 187 NRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFY--I 244
NRNP L+K E ELK LG+ KIIWL P +AG + + +FY
Sbjct: 215 NRNPGLSKSACEAELKRLLGLRKIIWL--------------PGIAGRDITDGHTDFYARF 260
Query: 245 ANGGIITPQFGD 256
A+ G++ D
Sbjct: 261 ASPGVVVAGLDD 272
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 227 KPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIV 286
+ +L AA Y+NFY+ NG +I PQFGD + D A +L + FP+ EVV ++ I
Sbjct: 312 RSKLESREFAAGYINFYVCNGAVIAPQFGDARADANARSLLRELFPRREVVQLD-IDAIA 370
Query: 287 LGGGNIHCITQQQP 300
GGG IHC TQQQP
Sbjct: 371 AGGGGIHCTTQQQP 384
>gi|119962775|ref|YP_949267.1| peptidylarginine deiminase [Arthrobacter aurescens TC1]
gi|119949634|gb|ABM08545.1| putative peptidylarginine deiminase [Arthrobacter aurescens TC1]
Length = 352
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 127/275 (46%), Gaps = 20/275 (7%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MPAE PH + WM +P L + A A + VA A+++FEPV++ ++ E
Sbjct: 5 MPAETAPHERTWMAFPRTGLTLGHDAASAEEAYSAWTAVAHAVAEFEPVSMVVDPSERER 64
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG-IDWNFNSWGGVDD 132
A L I IE ++ W RD GPT V++ + P V G +DW FN WG
Sbjct: 65 AARMLGSGIEQIEAPLDEFWMRDVGPTFVLDD-------ERPGVLGAVDWIFNGWGAP-- 115
Query: 133 GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
+ +W +AR + +V EGG+IHVDGEGT L TE L+ RNP
Sbjct: 116 -AWSEWQKSAGMARFVAGKAGAELVSSLLVNEGGAIHVDGEGTVLVTETVQLDPGRNPCA 174
Query: 193 TKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGGIIT- 251
K +E EL +G K+IW+PRGL D GTR V G I+
Sbjct: 175 DKAAVEAELARTIGATKVIWVPRGLTRDYED-------LGTRGHIDMVATLPTPGRILLH 227
Query: 252 PQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIV 286
Q + D E R L QAF + + ++ EIV
Sbjct: 228 SQTNPEHPDYEVSRTL-QAFLETQTDAADKPFEIV 261
>gi|398831138|ref|ZP_10589317.1| peptidylarginine deiminase-like enzyme [Phyllobacterium sp. YR531]
gi|398212706|gb|EJM99308.1| peptidylarginine deiminase-like enzyme [Phyllobacterium sp. YR531]
Length = 364
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 111/237 (46%), Gaps = 43/237 (18%)
Query: 14 MPAEWEPHSQCWMG-------WPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
MP E +PH+ WM W + +R AQ A++A AI+ EPV +
Sbjct: 36 MPDEGDPHTATWMAFGPSQEVWGKKLQR---------GAQNNLAQIAKAIAAHEPVNMLV 86
Query: 67 SAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
E A S ++ + ++ W RDTGP V +QA K+A +D+NFN
Sbjct: 87 REEDHEIAESLCGGDVTLFVRDIDDLWMRDTGPVFV--------KSQAGKLAAVDFNFNG 138
Query: 127 WGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNK 186
WG + D +VA + + +VLEGG I VDG+GT + TE C+LNK
Sbjct: 139 WGN-----KQAHDADAEVAEFVAEKSTIEVLRTKLVLEGGGIEVDGKGTAIITESCVLNK 193
Query: 187 NRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFY 243
NRNP ++K Q E EL LG+ KIIWL P +AG + + +FY
Sbjct: 194 NRNPGVSKEQCEAELGRLLGLKKIIWL--------------PGIAGKDITDGHTDFY 236
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 227 KPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIV 286
+P+ AA Y+NFY+ NG +I P+FGDKK D L A P EVV ++ I
Sbjct: 291 RPQFENNEFAAGYINFYLCNGAVIVPEFGDKKADQYCRDALRDALPDREVVQLD-IDAIA 349
Query: 287 LGGGNIHCITQQQPA 301
GGG IHC TQQQPA
Sbjct: 350 AGGGGIHCTTQQQPA 364
>gi|325915991|ref|ZP_08178284.1| peptidylarginine deiminase-like enzyme [Xanthomonas vesicatoria
ATCC 35937]
gi|325537801|gb|EGD09504.1| peptidylarginine deiminase-like enzyme [Xanthomonas vesicatoria
ATCC 35937]
Length = 345
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 151/357 (42%), Gaps = 92/357 (25%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCAS------ 67
PAEWEP S + WP +W + + + + TAI +FEPV +CA+
Sbjct: 7 FPAEWEPQSAVLLAWP---HAGTDWAERLADVEETYIALVTAICRFEPVVICAADDDLQI 63
Query: 68 --AAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A+ +AR + +R + + N +W RD+GP + Q + +D+ F
Sbjct: 64 YAEARLRSARVDM-TRVRFVIAAYNDTWLRDSGPITLRQ--------QDDEFRLMDFRFT 114
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSM-----VLEGGSIHVDGEGTCLTTE 180
WGG + SLD Q+ + + + P S+ LEGG+I DG GT LTT
Sbjct: 115 GWGGKFEA-----SLDDQLVSSLDAAQVF--VPASVQTVDFALEGGAIETDGAGTLLTTW 167
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLF---------------------- 218
CL R+P T+ + ++L A+L +++WL G
Sbjct: 168 TCL--HERHPQRTRESLSSDLAAWLSQDRVLWLDHGYLEGDDTDAHIDTLARFAGPDAIV 225
Query: 219 -------GMIHDGEAKP---RLAGTRLA------------------------ASYVNFYI 244
G H E + LA R A ASY NF I
Sbjct: 226 YQGCDVQGDSHYAELQAMGNELAALRTADGRPYRLFVLPWAEPILDQGRRLAASYANFLI 285
Query: 245 ANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
NG ++ P +GD D A VL++AFP++E+V + R ++ G++HC+T Q PA
Sbjct: 286 VNGAVLMPAYGDAA-DVTAQEVLAEAFPQHEIVPVP-CRALIWQNGSLHCLTMQLPA 340
>gi|420909612|ref|ZP_15372925.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0125-R]
gi|420941339|ref|ZP_15404598.1| putative agmatine deiminase [Mycobacterium massiliense 1S-153-0915]
gi|420945722|ref|ZP_15408975.1| putative agmatine deiminase [Mycobacterium massiliense 1S-154-0310]
gi|421012536|ref|ZP_15475623.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0122-R]
gi|421028487|ref|ZP_15491522.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0930-R]
gi|421034138|ref|ZP_15497160.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0930-S]
gi|392121986|gb|EIU47751.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0125-R]
gi|392151307|gb|EIU77018.1| putative agmatine deiminase [Mycobacterium massiliense 1S-153-0915]
gi|392158930|gb|EIU84626.1| putative agmatine deiminase [Mycobacterium massiliense 1S-154-0310]
gi|392205076|gb|EIV30660.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0122-R]
gi|392230679|gb|EIV56189.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0930-S]
gi|392231052|gb|EIV56561.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0930-R]
Length = 400
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 107/205 (52%), Gaps = 12/205 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MP+E P + +MG+P E D+AL A+ +++VA I+ F PV + + E
Sbjct: 67 MPSETAPQERIFMGFPPLGELFGATHDEALVARTAWSEVANTIAGFLPVEMVVAPGDQEV 126
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
ARS L +I++ E ++ +W RD GPT VV ++ ++ +DW FN WG
Sbjct: 127 ARSMLTSSIQLHEAPLDEAWMRDFGPTFVVGENG--------QLGAVDWGFNGWGQ-QPS 177
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
C W+ D ++ + + +V EGG IHVDG GT T+ L++ RNP +
Sbjct: 178 C---WANDAKIGAFVANLAGAELVSSDLVNEGGGIHVDGRGTVFLTDTVQLDRFRNPDWS 234
Query: 194 KGQIENELKAYLGVMKIIWLPRGLF 218
+ QIE EL +GV +WL RGLF
Sbjct: 235 RTQIERELTRTIGVTSFVWLHRGLF 259
>gi|169629113|ref|YP_001702762.1| putative peptidyl-arginine deiminase [Mycobacterium abscessus ATCC
19977]
gi|419708613|ref|ZP_14236082.1| putative peptidyl-arginine deiminase [Mycobacterium abscessus M93]
gi|419713364|ref|ZP_14240791.1| putative peptidyl-arginine deiminase [Mycobacterium abscessus M94]
gi|420862598|ref|ZP_15325994.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0303]
gi|420867183|ref|ZP_15330570.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0726-RA]
gi|420872726|ref|ZP_15336104.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0726-RB]
gi|420926888|ref|ZP_15390171.1| putative agmatine deiminase [Mycobacterium abscessus 6G-1108]
gi|420938465|ref|ZP_15401734.1| putative agmatine deiminase [Mycobacterium massiliense 1S-152-0914]
gi|420977232|ref|ZP_15440412.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0212]
gi|421043083|ref|ZP_15506084.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0116-S]
gi|169241080|emb|CAM62108.1| Putative peptidyl-arginine deiminase [Mycobacterium abscessus]
gi|382943888|gb|EIC68199.1| putative peptidyl-arginine deiminase [Mycobacterium abscessus M93]
gi|382946774|gb|EIC71057.1| putative peptidyl-arginine deiminase [Mycobacterium abscessus M94]
gi|392073368|gb|EIT99207.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0726-RB]
gi|392075514|gb|EIU01348.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0726-RA]
gi|392077759|gb|EIU03590.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0303]
gi|392135573|gb|EIU61311.1| putative agmatine deiminase [Mycobacterium abscessus 6G-1108]
gi|392143980|gb|EIU69705.1| putative agmatine deiminase [Mycobacterium massiliense 1S-152-0914]
gi|392167813|gb|EIU93494.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0212]
gi|392236935|gb|EIV62429.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0116-S]
Length = 342
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 107/205 (52%), Gaps = 12/205 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MP+E P + +MG+P E D+AL A+ +++VA I+ F PV + + E
Sbjct: 9 MPSETAPQERIFMGFPPLGELFGATHDEALVARTAWSEVANTIAGFLPVEMVVAPGDQEV 68
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
ARS L +I++ E ++ +W RD GPT VV ++ ++ +DW FN WG
Sbjct: 69 ARSMLTSSIQLHEAPLDEAWMRDFGPTFVVGENG--------QLGAVDWGFNGWGQ-QPS 119
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
C W+ D ++ + + +V EGG IHVDG GT T+ L++ RNP +
Sbjct: 120 C---WANDAKIGAFVANLAGAELVSSDLVNEGGGIHVDGRGTVFLTDTVQLDRFRNPDWS 176
Query: 194 KGQIENELKAYLGVMKIIWLPRGLF 218
+ QIE EL +GV +WL RGLF
Sbjct: 177 RTQIERELTRTIGVTSFVWLHRGLF 201
>gi|421039432|ref|ZP_15502442.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0116-R]
gi|392225541|gb|EIV51058.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0116-R]
Length = 359
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 107/205 (52%), Gaps = 12/205 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MP+E P + +MG+P E D+AL A+ +++VA I+ F PV + + E
Sbjct: 26 MPSETAPQERIFMGFPPLGELFGATHDEALVARTAWSEVANTIAGFLPVEMVVAPGDQEV 85
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
ARS L +I++ E ++ +W RD GPT VV ++ ++ +DW FN WG
Sbjct: 86 ARSMLTSSIQLHEAPLDEAWMRDFGPTFVVGENG--------QLGAVDWGFNGWGQ-QPS 136
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
C W+ D ++ + + +V EGG IHVDG GT T+ L++ RNP +
Sbjct: 137 C---WANDAKIGAFVANLAGAELVSSDLVNEGGGIHVDGRGTVFLTDTVQLDRFRNPDWS 193
Query: 194 KGQIENELKAYLGVMKIIWLPRGLF 218
+ QIE EL +GV +WL RGLF
Sbjct: 194 RTQIERELTRTIGVTSFVWLHRGLF 218
>gi|420915998|ref|ZP_15379303.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0125-S]
gi|420924517|ref|ZP_15387813.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0728-S]
gi|420931081|ref|ZP_15394356.1| putative agmatine deiminase [Mycobacterium massiliense 1S-151-0930]
gi|420966397|ref|ZP_15429603.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0810-R]
gi|420982606|ref|ZP_15445776.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0728-R]
gi|421007066|ref|ZP_15470178.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0119-R]
gi|421017445|ref|ZP_15480506.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0122-S]
gi|421022640|ref|ZP_15485688.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0731]
gi|392123682|gb|EIU49444.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0125-S]
gi|392129170|gb|EIU54920.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0728-S]
gi|392135840|gb|EIU61577.1| putative agmatine deiminase [Mycobacterium massiliense 1S-151-0930]
gi|392174624|gb|EIV00291.1| putative agmatine deiminase [Mycobacterium abscessus 6G-0728-R]
gi|392199995|gb|EIV25602.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0119-R]
gi|392212380|gb|EIV37942.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0122-S]
gi|392215337|gb|EIV40885.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0731]
gi|392254341|gb|EIV79807.1| putative agmatine deiminase [Mycobacterium abscessus 3A-0810-R]
Length = 382
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 107/205 (52%), Gaps = 12/205 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MP+E P + +MG+P E D+AL A+ +++VA I+ F PV + + E
Sbjct: 49 MPSETAPQERIFMGFPPLGELFGATHDEALVARTAWSEVANTIAGFLPVEMVVAPGDQEV 108
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
ARS L +I++ E ++ +W RD GPT VV ++ ++ +DW FN WG
Sbjct: 109 ARSMLTSSIQLHEAPLDEAWMRDFGPTFVVGENG--------QLGAVDWGFNGWGQ-QPS 159
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
C W+ D ++ + + +V EGG IHVDG GT T+ L++ RNP +
Sbjct: 160 C---WANDAKIGAFVANLAGAELVSSDLVNEGGGIHVDGRGTVFLTDTVQLDRFRNPDWS 216
Query: 194 KGQIENELKAYLGVMKIIWLPRGLF 218
+ QIE EL +GV +WL RGLF
Sbjct: 217 RTQIERELTRTIGVTSFVWLHRGLF 241
>gi|420986915|ref|ZP_15450073.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0206]
gi|392186786|gb|EIV12431.1| putative agmatine deiminase [Mycobacterium abscessus 4S-0206]
Length = 354
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 107/205 (52%), Gaps = 12/205 (5%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
MP+E P + +MG+P E D+AL A+ +++VA I+ F PV + + E
Sbjct: 21 MPSETAPQERIFMGFPPLGELFGATHDEALVARTAWSEVANTIAGFLPVEMVVAPGDQEV 80
Query: 74 ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDG 133
ARS L +I++ E ++ +W RD GPT VV ++ ++ +DW FN WG
Sbjct: 81 ARSMLTSSIQLHEAPLDEAWMRDFGPTFVVGENG--------QLGAVDWGFNGWGQ-QPS 131
Query: 134 CYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLT 193
C W+ D ++ + + +V EGG IHVDG GT T+ L++ RNP +
Sbjct: 132 C---WANDAKIGAFVANLAGAELVSSDLVNEGGGIHVDGRGTVFLTDTVQLDRFRNPDWS 188
Query: 194 KGQIENELKAYLGVMKIIWLPRGLF 218
+ QIE EL +GV +WL RGLF
Sbjct: 189 RTQIERELTRTIGVTSFVWLHRGLF 213
>gi|407641688|ref|YP_006805447.1| peptidyl-arginine deiminase [Nocardia brasiliensis ATCC 700358]
gi|407304572|gb|AFT98472.1| peptidyl-arginine deiminase [Nocardia brasiliensis ATCC 700358]
Length = 372
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 108/207 (52%), Gaps = 17/207 (8%)
Query: 7 PALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
PA G AEWE H++ +M WP + N+ D ++ A +A I+++E V + A
Sbjct: 33 PAGPGGRFGAEWESHARTYMSWPAQAAIWGNYLGDV---RKDIAGLAREIAEYEYVVMLA 89
Query: 67 SAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
A Q ++A+ Q + VI + ++ W RDT P V QA KV G+D +FN
Sbjct: 90 RAGQVKDAQKQCGSGVEVIALEVDDLWARDTVPVFV---------EQAGKVVGVDLHFNG 140
Query: 127 WGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNK 186
WG + D + R +LS +P + V EGG++ DG+GT L TE ++N
Sbjct: 141 WGN-----KQPHPNDGPLGRNLLSRYSIPSYSAPFVAEGGALETDGQGTLLVTESSIVND 195
Query: 187 NRNPHLTKGQIENELKAYLGVMKIIWL 213
NRNP ++ Q+E ELK LG+ K+IW
Sbjct: 196 NRNPGKSRDQLEAELKQTLGIEKVIWF 222
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 232 GTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGN 291
G +SY NFYIANG + P+FGD+ D A +L P +VV + EI GGG
Sbjct: 300 GDEFVSSYANFYIANGAVFLPEFGDRAADDRAQGILRDHLPGRDVVPVP-IDEIAAGGGG 358
Query: 292 IHCITQQQPAIPTN 305
IHC T QP P +
Sbjct: 359 IHCSTHDQPGKPEH 372
>gi|197103790|ref|YP_002129167.1| hypothetical protein PHZ_c0324 [Phenylobacterium zucineum HLK1]
gi|196477210|gb|ACG76738.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 344
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 151/354 (42%), Gaps = 87/354 (24%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISK--FEPVTVCASAA 69
+ +PAEW PH W+G+P D W D AQ A +A A++ E V +
Sbjct: 15 FTVPAEWAPHKAMWLGFP---SHADLWEADLDEAQAEVAALARALAGPGGERVRLMTGHP 71
Query: 70 QWENARSQLPENIRVIEMS---MNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
E A +L ++ +E++ W RDTGP K+ + FN
Sbjct: 72 DGEAAARRLLGDVPNVEITAGRFGDIWLRDTGPIFAGGKAHG-------------FRFNG 118
Query: 127 WGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNK 186
WGG D + D +VA +I +P H +LEGG++ DG GT LTT +CLLN
Sbjct: 119 WGGKYDLPHDD-----EVAAQIAQASGVPLVAHDFILEGGAVDHDGFGTVLTTGQCLLNP 173
Query: 187 NRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG---------------------- 224
NRNP T+ E L LG K++WL GL DG
Sbjct: 174 NRNPGWTEAAAEAALAKALGAKKVLWLGEGLQNDHTDGHVDNLARFVAPGVVAVPVAWGR 233
Query: 225 ---------EAKPRLAGTR--------------------------LAASYVNFYIANGGI 249
+A RLAG + AS++NF IAN +
Sbjct: 234 GDPNAEAYDDAARRLAGATDARGEPIVVVRVPSPGWVEGEPGEGPIPASHMNFLIANQAV 293
Query: 250 ITPQFGDKKWDGE-AVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
I P + + GE AV+ L Q FP +VG+ + I+ GGG+ HCITQQ+PA+
Sbjct: 294 IVPIYEARP--GELAVQALEQLFPGRAIVGLP-SLAILTGGGSFHCITQQEPAL 344
>gi|346318260|gb|EGX87864.1| putative peptidyl-arginine deiminase family protein [Cordyceps
militaris CM01]
Length = 373
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 112/220 (50%), Gaps = 18/220 (8%)
Query: 12 YLMPAEWEPHSQCWMGWPV-RYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQ 70
Y PAEW S M WP N DD A + +A A++KFEPVT+ ++
Sbjct: 17 YFRPAEWGAQSSVIMAWPSGDNPAYHNAPDDLSAATEDISNIAAAVAKFEPVTLLVVQSR 76
Query: 71 WENARSQLPE--NIRVIEMSMNGS---WFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
+A++Q + NI ++ ++ + W RD PT V+++S+ + ++AG+D+NFN
Sbjct: 77 LADAQAQFADRSNITLLPIATYPTLDLWMRDMAPTFVLDRSNTTG-----QLAGVDYNFN 131
Query: 126 SWGG-VDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLL 184
WGG G + L K+ PR ++V EGGS+ VDGEGT L TE +L
Sbjct: 132 GWGGKFPTGSCLSLASLLSYHMKV------PRVDGALVSEGGSLEVDGEGTLLVTESSVL 185
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
NRNP TK Q E + LGV K IW+P I DG
Sbjct: 186 IDNRNPGTTKAQAEAAFEKTLGVTKTIWIPGRRGSDITDG 225
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 18/159 (11%)
Query: 144 VARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKA 203
+AR I L P S LEGG VD T L N +G++ + +
Sbjct: 230 LARFIAPGRVLLSRPSS--LEGGGPFVD---TYREARAILANTTD----ARGRVLHVTEI 280
Query: 204 YLGVMKIIWLPRGLFGMIHDGEAK-PRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGE 262
++ I + L + DG+ P L +YVN+ + NGGI+ FGDK+ D
Sbjct: 281 AEAELENIGADKELVQQVQDGQKDYPSL-------TYVNYVMVNGGIVFAAFGDKEADAA 333
Query: 263 AVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
A++++ +P V + LGGG IHC TQ+ PA
Sbjct: 334 ALKLIQGLYPDRTVEVVNTQTLAFLGGG-IHCSTQEVPA 371
>gi|225849711|ref|YP_002729945.1| agmatine deiminase (Agmatine iminohydrolase) [Persephonella marina
EX-H1]
gi|225646674|gb|ACO04860.1| agmatine deiminase (Agmatine iminohydrolase) [Persephonella marina
EX-H1]
Length = 337
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 147/357 (41%), Gaps = 86/357 (24%)
Query: 9 LHGYLMPAEWEPHSQCWMGWPVRYE----RLDNWRDDALHAQRVFAKVATAISKFEPVTV 64
+ + MPAEWE H +P YE RLD RD F ++ IS+ E V +
Sbjct: 1 MERFRMPAEWEKHKGTITTYPQAYETFFDRLDQARDQ-------FVQMVKYISEGETVYI 53
Query: 65 CASAAQWEN------ARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVA 118
+ + + R + ++R++ + +W RD P I V S ++ A
Sbjct: 54 NVNGEEEKKDLLKRLERFNVNGDVRILINKTDDAWCRDYCP-IFVKDSEGNTVA------ 106
Query: 119 GIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLT 178
+ + FNSWGG + D + KI + MVLEGGS+ V+G G LT
Sbjct: 107 -LKFRFNSWGGK-----YPYENDEKTGNKIPEILGYKKINIDMVLEGGSVEVNGNGVLLT 160
Query: 179 TEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAK----------- 227
TE CLLN NRNP L+K +IE +L+ YLGV +I WL G+ G DG
Sbjct: 161 TESCLLNPNRNPDLSKEEIEEKLRFYLGVNRIFWLGEGIIGDDTDGHIDDITRFVSKDTV 220
Query: 228 --------------PRLAGTRLAASYVNFYIANGGIITPQF----GDKK----------- 258
P + + S F I + P + GD K
Sbjct: 221 VTAFEDNRNDPNYYPLIENYKRLKSLKEFNIVKIPMPDPVYYKYPGDDKPYRLPASYVNF 280
Query: 259 ---------------WDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
D A+ L + FP EV+GI A +IV+G G HC+TQQ P
Sbjct: 281 YISNKAVVVPVFNCDKDEIALETLRKLFPDREVIGI-YAYDIVIGLGAFHCLTQQIP 336
>gi|418522545|ref|ZP_13088579.1| hypothetical protein WS7_16168 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410701017|gb|EKQ59550.1| hypothetical protein WS7_16168 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
Length = 344
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 148/352 (42%), Gaps = 83/352 (23%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCAS------ 67
PAEWEP S + WP +W + + + + TAIS+FEPV +C +
Sbjct: 7 FPAEWEPQSAVLLAWP---HAGTDWAERLADVEETYIALVTAISRFEPVVICVADDDLQI 63
Query: 68 --AAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A+ +AR + +R + + N +W RD+GP + ++ +D+ F
Sbjct: 64 YAEARLRSARVDM-TRVRFVIAAYNDTWLRDSGPITLRQEAGFRL---------MDFRFT 113
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLN 185
WGG + D + A ++ ++ LEGG+I DG GT LTT +CL
Sbjct: 114 GWGGKFEASLDDQLVSSLDAAQVFVPAQVETV--DFALEGGAIETDGAGTLLTTWKCL-- 169
Query: 186 KNRNPHLTKGQIENELKAYLGVMKIIWLPR-------------------GLFGMIHDG-- 224
R+P T+ + ++L +L +++WL GL +++ G
Sbjct: 170 HERHPQRTRESLSSDLATWLAQERVLWLDHGYLEGDDTDAHIDTLARFAGLDAIVYQGCD 229
Query: 225 ------EAKPRLAGTRLAA-----------------------------SYVNFYIANGGI 249
+ + G LAA SY NF I NG +
Sbjct: 230 VASDSHYVELQAMGAELAALRKADGQPYRLFVLPWAQPILDEGRRLAASYANFLIVNGAV 289
Query: 250 ITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
+ P +GD D A VL+QAFP +E+V + R ++ G++HC+T Q PA
Sbjct: 290 LMPAYGDAA-DATAQAVLAQAFPHHEIVPVP-CRALIWQNGSLHCLTMQLPA 339
>gi|157164457|ref|YP_001466618.1| orotidine 5'-phosphate decarboxylase [Campylobacter concisus 13826]
gi|112800737|gb|EAT98081.1| porphyromonas-type peptidyl-arginine deiminase superfamily
[Campylobacter concisus 13826]
Length = 322
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 149/335 (44%), Gaps = 72/335 (21%)
Query: 16 AEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT-VCASAAQWENA 74
AEWE ++ P + ++ L + ++ AI+ FE V +C A + A
Sbjct: 5 AEWEEQELLFLSLPHSKSDWGPYLEEILAG---YEELVAAITPFEKVVLICPDEANF--A 59
Query: 75 RSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGC 134
R + +N+ +++ + +W RD G V K S D+ FN+WGG
Sbjct: 60 RFKKFKNVEFVKLETDDTWIRDYGMIDVCTKDGVKS---------YDFKFNAWGGKFKSS 110
Query: 135 YRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTK 194
+D +++L++A KI T+ P M+LEGGS+ +G G LTT +CLLN+NRN L+K
Sbjct: 111 -KDDAINLELA-KIYKTKLEPV---DMILEGGSVEFNGNGVLLTTTKCLLNENRNSSLSK 165
Query: 195 GQIENELKAYLGVMKIIWLPRGL------------------------------------- 217
QIE +LK G+ +IIWL G
Sbjct: 166 EQIEEKLKNLFGLKRIIWLENGFIRGDDTDSHIDTLARFITPDTIAYAACDDVSDEHFEE 225
Query: 218 ------------FGMIHDGEAKPRLA-GTRLAASYVNFYIANGGIITPQFGDKKWDGEAV 264
F ++ KP+ G RL +Y NF NG +I P + D+ D + +
Sbjct: 226 LKKMEDELKKTGFKLLALPLPKPKFYDGKRLGCTYANFIFINGALIVPTYNDEN-DEKVL 284
Query: 265 RVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQ 299
+L++A P +V+G+ + V G++HC +Q +
Sbjct: 285 NLLAKALPDRKVIGV-NSLVFVRQNGSLHCSSQNR 318
>gi|340515605|gb|EGR45858.1| porphyromonas-type peptidyl-arginine deiminase [Trichoderma reesei
QM6a]
Length = 356
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 132/292 (45%), Gaps = 37/292 (12%)
Query: 16 AEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENAR 75
AEW P + M WP L ++ + A + + +A AI+ FEPVTV + E A
Sbjct: 10 AEWAPQKEILMAWPGLEGILQDYPERLAKATQEVSNLAAAIANFEPVTVVVGTERIEEAE 69
Query: 76 SQL-------PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWG 128
+ P IE W RD P VV + + + G+D+NFN WG
Sbjct: 70 AHFAEVEAPFPITAHRIEGDSMDVWMRDIAPVFVVKNGPGNDRS----LVGLDYNFNGWG 125
Query: 129 GVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNR 188
G + A+ IL ++ R S+V EGG++ DG+GT L TE ++N+NR
Sbjct: 126 G-----RYPTPTTIHAAKMILKDLKIERIETSIVTEGGALEADGDGTLLVTESSIVNENR 180
Query: 189 NPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGEAKPRLAGTRLAASYVNFYIANGG 248
NP ++ +IE+EL LG+ K+IW+P +P L T + ++ G
Sbjct: 181 NPGKSRQEIEDELVRTLGIKKVIWIP-----------GRPGLDSTDCHIDALARFVRPGV 229
Query: 249 IITPQFGDKK---WD---GEAVRVLSQAFPK----YEVVGIERAREIVLGGG 290
I + +K+ W EA+ +LS A +E+V IE E + GG
Sbjct: 230 IALSKANEKEPTDWTVVYEEALEILSSATDAKGRPFEIVEIEEPDEELFEGG 281
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 35/70 (50%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
R SYVN+ + NGGII P+FGD D A+R F + E+ GG IH
Sbjct: 287 RAVRSYVNYLLVNGGIILPRFGDPAHDAAAIRATQLLFGDERRIFPVLVDELPRLGGGIH 346
Query: 294 CITQQQPAIP 303
C TQ+ P P
Sbjct: 347 CSTQEVPLFP 356
>gi|225848162|ref|YP_002728325.1| agmatine deiminase (Agmatine iminohydrolase) [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225644015|gb|ACN99065.1| agmatine deiminase (Agmatine iminohydrolase) [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 340
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 111/222 (50%), Gaps = 30/222 (13%)
Query: 14 MPAEWEPHSQCWMGWPVR----YERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAA 69
MPAEWE H W+ +P +E++D+ RD + ++ IS E V V +
Sbjct: 6 MPAEWEKHYGTWLSYPYNPDTFFEKIDDVRDK-------YVEMIKWISLGEKVHVNINDE 58
Query: 70 QWE-NARSQL------PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ E + + +L P + + N +W RD G V + + + +++
Sbjct: 59 EMEEDLKKRLKEKDVDPNQVVIHRFPTNDAWCRDHGAIFVKDLDKNT-------LVALNF 111
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
FN+WGG LD Q+ K+ + R MVLEGGSI V+GEG LTTE C
Sbjct: 112 KFNAWGG-----KYPHDLDDQIPTKMAQYLGVERIDIDMVLEGGSIDVNGEGLLLTTESC 166
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
LLN NRNPH++K +IE LK Y GV KI+WL G+ G DG
Sbjct: 167 LLNSNRNPHMSKQEIEENLKKYFGVSKILWLKEGIVGDDTDG 208
>gi|86143315|ref|ZP_01061717.1| hypothetical protein MED217_09035 [Leeuwenhoekiella blandensis
MED217]
gi|85830220|gb|EAQ48680.1| hypothetical protein MED217_09035 [Leeuwenhoekiella blandensis
MED217]
Length = 345
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 153/358 (42%), Gaps = 89/358 (24%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
+PAEWE + +P ++W Q VF I++ E V + +N
Sbjct: 7 LPAEWEKQQGILLCFP---SNGNDWPGKYQAIQFVFIDFIKKIAETETVFLLVGRESIKN 63
Query: 74 ARSQLPE-------NIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNS 126
L E I I N SW RD+GP IV +GA+ +++NFN
Sbjct: 64 KVITLLEAAHANLGKIIFILQKTNRSWMRDSGPIIV-----KHNGARE----ALNFNFNG 114
Query: 127 WGGVDDGCYRDWSLDLQVARKI-----LSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEE 181
W Y ++ LD QV +++ + +++ ++LEGG+I V+G+GT LT+EE
Sbjct: 115 WAK-----YGNYRLDKQVPKRMADFLGIPLQQVMYNEEPVILEGGAIDVNGKGTLLTSEE 169
Query: 182 CLLN---KNRNPHLTKGQIENELKAYLGVMKIIWLPRGL--------------------- 217
CLL+ + RNP TK E + Y GV IWL +G+
Sbjct: 170 CLLDPKIQVRNPGFTKEDYEKIFEKYFGVTNTIWLGKGIAGDDTHGHIDDLCRFVDAKTI 229
Query: 218 ------------FGMIHDGEAKPRLA----------------------GTRLAASYVNFY 243
+ ++ D A+ LA RL ASY NF
Sbjct: 230 VTVVETDPSDPNYAVLQDNLARLELAKLEDGSTPRVVTLPMPKRIDYEDLRLPASYANFL 289
Query: 244 IANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
I N ++ P F D D A++ LS+ FP +V+GI A ++V G G +HC++QQ P+
Sbjct: 290 ILNKTVLVPTFNDLN-DSVALKTLSELFPNRKVIGI-CALDLVWGLGTLHCLSQQIPS 345
>gi|88601353|ref|YP_501531.1| peptidyl-arginine deiminase [Methanospirillum hungatei JF-1]
gi|88186815|gb|ABD39812.1| agmatine deiminase [Methanospirillum hungatei JF-1]
Length = 631
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 109/225 (48%), Gaps = 21/225 (9%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVC 65
TPA GY MPAEWE H WM WP Y L +A+ + + + +++ +
Sbjct: 291 TPANQGYHMPAEWEHHDAVWMAWP--YNDLTFPHLEAV--EETYLTILSSLRSERVELLI 346
Query: 66 ASAAQWENARSQLP------ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
A E L +IR + + W RD GPT VVN++ V+
Sbjct: 347 ADPTYQEKILHMLSFRGVDCSHIRFHIVHYSDVWIRDFGPTCVVNRALHD-------VSA 399
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTT 179
+ W+FN+WG Y + LD ++ T + F +VLEGGSI +G G LTT
Sbjct: 400 VFWDFNAWGNK----YDELILDGVKTHELFQTLGMKIFRPGIVLEGGSIDSNGRGCVLTT 455
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
+CLLN NRNPHLT+ IE+ L YL KIIWL G+ G DG
Sbjct: 456 RQCLLNPNRNPHLTQDDIEHYLCEYLCARKIIWLHEGIAGDDTDG 500
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 232 GTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGN 291
R ASY+NFYI N ++ P F D+ D A+ +L FP EV+GI AR +V G G
Sbjct: 563 SNRYPASYLNFYIGNEVVLVPVFDDEH-DSRALEILQPLFPDREVIGIP-ARAMVEGFGT 620
Query: 292 IHCITQQQP 300
IHC TQQQP
Sbjct: 621 IHCATQQQP 629
>gi|302833850|ref|XP_002948488.1| hypothetical protein VOLCADRAFT_88897 [Volvox carteri f.
nagariensis]
gi|300266175|gb|EFJ50363.1| hypothetical protein VOLCADRAFT_88897 [Volvox carteri f.
nagariensis]
Length = 436
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 121/238 (50%), Gaps = 28/238 (11%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N TP G+ MP E+EPH+ WM +P Y+ WRD+A AQ+ ++A AIS+FEPV
Sbjct: 43 NPTPRELGFRMPGEYEPHAGTWMAFP--YDPY-LWRDEARPAQQQQVEIARAISQFEPVW 99
Query: 64 VCASAAQ--------WENARSQLP--ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQ 113
+ A ++ ARS + VI M N W RD GPT VV + +
Sbjct: 100 MLADPKARMMDILTVYDVARSYFRGISGVEVINMPTNDVWTRDWGPTCVVRDDPVTGERE 159
Query: 114 APKVAGIDWNFNSWGG---VDDGC---YRDWSLDLQVARKI------LSTERLPRFPHSM 161
VA + ++FN +G ++ G DWS D R + + + F +
Sbjct: 160 ---VAAVHFDFNCYGSPIKMEHGLPPLLPDWSKDRAAGRSLSRQGAAATGAPMRVFECPL 216
Query: 162 VLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
LEGG++ DG GT L TEECLL+ +R+P L IE L+ YLG +++WL +G+ G
Sbjct: 217 HLEGGAVQSDGAGTLLVTEECLLHYSRDPELDSAGIEALLRDYLGAERVVWLWKGMVG 274
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 24/28 (85%)
Query: 231 AGTRLAASYVNFYIANGGIITPQFGDKK 258
AG RL ASY+N+Y+ANGG++ PQFG ++
Sbjct: 367 AGRRLPASYINYYVANGGVVVPQFGGEQ 394
>gi|302538241|ref|ZP_07290583.1| agmatine deiminase [Streptomyces sp. C]
gi|302447136|gb|EFL18952.1| agmatine deiminase [Streptomyces sp. C]
Length = 377
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 16/198 (8%)
Query: 16 AEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENAR 75
AEWE H++ +M WP + W +D + + A++A AI ++E V + A Q A+
Sbjct: 46 AEWESHTRTFMSWPALAAGV--WEEDLRYVREDIARIARAIGEYEAVVMMARPEQVSAAQ 103
Query: 76 SQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCY 135
+ + VI ++++ W RDT P V + KV G+D+NFN WG
Sbjct: 104 RAVGSQVEVIPLAVDDLWARDTVPVFV---------EEGGKVTGVDFNFNGWGN-----K 149
Query: 136 RDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKG 195
+ D +V R +L +PR +V EGGS DGEGT L TE ++N NRN ++
Sbjct: 150 QKHPNDARVGRALLQKYGIPRVQAPLVAEGGSFEPDGEGTLLITESSIVNDNRNRGKSRD 209
Query: 196 QIENELKAYLGVMKIIWL 213
+E ELK LGV K++WL
Sbjct: 210 TVEAELKRTLGVEKVVWL 227
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 232 GTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGN 291
G A+Y NFYIAN + P+FGD+ D A +L + FP+ +VV + I GGG
Sbjct: 305 GDDFVATYANFYIANDAVFMPEFGDRAADDRARGILQEHFPERDVVPLPIG-TIASGGGG 363
Query: 292 IHCITQQQPAIP 303
IHC T QP P
Sbjct: 364 IHCSTHDQPGRP 375
>gi|322706303|gb|EFY97884.1| putative agmatine deiminase [Metarhizium anisopliae ARSEF 23]
Length = 363
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 9 LHGYLMP--AEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCA 66
+ GY + AEW PHS +GWP L ++ + A R + +A A++ FEPVT+
Sbjct: 1 MSGYTLRRRAEWTPHSGIILGWPGLEGILKDYPEFLAQATREVSNIAQAVAHFEPVTLVV 60
Query: 67 SAAQWENARS-----QLPENIRV--IEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAG 119
A + E A + P +IR+ I+ W RD P V+ ++ +AG
Sbjct: 61 GAERIEEAEVYFNEIETPFSIRLHRIQGDSMDIWMRDIAPVFVIKENPGEG-----TLAG 115
Query: 120 IDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTT 179
+D+NFN WGG ++AR IL + R S+V EGG++ DGEGT + T
Sbjct: 116 LDYNFNGWGG-----KYPTPTTRELARIILRDLGIERIETSIVTEGGALETDGEGTLILT 170
Query: 180 EECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLP 214
E ++N NRNP ++ IE EL LGV KIIW+P
Sbjct: 171 ESSIVNDNRNPGKSRQDIEEELIRTLGVEKIIWIP 205
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
R SYVN+ + NGGII PQFGD D A+RV + F + + ++ + GG +H
Sbjct: 294 RAVRSYVNYLLVNGGIILPQFGDPAHDAAAIRVTQRVFGEERKIYPVLIEQLPVLGGGVH 353
Query: 294 CITQQQPAIP 303
C TQ+ P +P
Sbjct: 354 CATQEIPELP 363
>gi|264678338|ref|YP_003278245.1| peptidyl-arginine deiminase [Comamonas testosteroni CNB-2]
gi|262208851|gb|ACY32949.1| Porphyromonas-type peptidyl-arginine deiminase [Comamonas
testosteroni CNB-2]
Length = 343
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 108/214 (50%), Gaps = 19/214 (8%)
Query: 4 NGTPALHG--YLMPAEWEPHSQCWMGWPVRYERLDNW-RDDALHAQRVFAKVATAISKFE 60
NG+ + G + MP E E H WM + W R Q A++A AI+ +E
Sbjct: 3 NGSTSNQGQEWHMPDEAEAHKATWMAYGASTAI---WTRAQVPQVQLALARIANAIAAYE 59
Query: 61 PVTVCASAAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGI 120
PV + ++ ENAR L + +I ++ W RDTGP V + + A +
Sbjct: 60 PVNMLVRQSELENARQLLDPRVTLIPAQLDDLWMRDTGPVFVRKPNG--------ERACV 111
Query: 121 DWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTE 180
+NFN WG + + D VA + + +LP +VLEGG++ VDG+GT + TE
Sbjct: 112 KFNFNGWGK-----KQQFDHDGLVADVVSAYVKLPLLATRLVLEGGALEVDGKGTAIITE 166
Query: 181 ECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLP 214
C+LN NRNP +K E EL+ LG+ K+IWLP
Sbjct: 167 SCVLNSNRNPGWSKADCEAELQRLLGIRKVIWLP 200
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 224 GEAKPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAR 283
G+ +P AA Y+N+Y ++ I P+FGD K D A + +Q +P V+ I
Sbjct: 267 GQIRPGNNPDTFAAGYINYYASSRAIFLPEFGDAKADSIAKEIYAQLYPGRAVIQIN-ID 325
Query: 284 EIVLGGGNIHCITQQQ 299
I GGG IHC TQQ+
Sbjct: 326 PIAAGGGGIHCTTQQE 341
>gi|440750319|ref|ZP_20929563.1| Agmatine deiminase [Mariniradius saccharolyticus AK6]
gi|436481360|gb|ELP37541.1| Agmatine deiminase [Mariniradius saccharolyticus AK6]
Length = 359
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 108/227 (47%), Gaps = 18/227 (7%)
Query: 4 NGTPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT 63
N TP GY PAE+ PH+ W+ WP + D F K AI + +
Sbjct: 14 NITPKELGYFFPAEFAPHAATWLSWPHKEASWPGKIDTVFGPYSEFIK-QVAIGEEVHIN 72
Query: 64 VCASAAQ------WENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKV 117
V A + E A + L + N +W RD GP ++N ++A K
Sbjct: 73 VADEAMKSFALGHLEKAGADL-SKVFFHFFPTNDAWCRDHGPAFLINPNAAQ------KK 125
Query: 118 AGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCL 177
+ W +N+WG Y + LD + KI LP F +V+EGGS+ +G+GT L
Sbjct: 126 VLVKWKYNAWGDK----YPPYDLDNLIPIKIAEFRNLPCFQPGIVMEGGSVEFNGKGTLL 181
Query: 178 TTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDG 224
T+E CLLN NRNP L + QIE+ L+ Y GV I+WL G+ G DG
Sbjct: 182 TSEACLLNPNRNPQLNQDQIESYLRGYYGVENILWLKDGIIGDDTDG 228
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
RL ASY NFYIAN +I P F D D A+ +L F +V+GI+ + +I+ G G+ H
Sbjct: 293 RLPASYANFYIANHAVIVPTFRDPN-DAVALDILGTCFKDRKVIGID-SLDIIWGLGSFH 350
Query: 294 CITQQQPAI 302
C++QQ+P +
Sbjct: 351 CLSQQEPKV 359
>gi|406707042|ref|YP_006757394.1| Porphyromonas-type peptidyl-arginine deiminase [alpha
proteobacterium HIMB59]
gi|406652818|gb|AFS48217.1| Porphyromonas-type peptidyl-arginine deiminase [alpha
proteobacterium HIMB59]
Length = 327
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 144/346 (41%), Gaps = 77/346 (22%)
Query: 13 LMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWE 72
L+P EW H +C + WP E ++ A++ A +A I++ EPV + ++ +
Sbjct: 3 LIP-EWYNHDRCLIAWPCNLEL---YKSQIHSARKEIANLANQIAEEEPVYIYCNSQDLK 58
Query: 73 NARSQLP-ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVD 131
+ R + + I +IE+ ++ SW RD P + ++ +++NFN +G
Sbjct: 59 DCRLTVSNQEISIIEVDLDDSWMRDIAPIFY---------KEDKELRSMNFNFNGYGK-- 107
Query: 132 DGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPH 191
Y ++ D V+ I ++P S+ LEGG I D +G TTE LLN NRN +
Sbjct: 108 ---YPNFKNDNLVSDFICDQFKIPFTKSSITLEGGGITYDDQGNLFTTESVLLNSNRN-N 163
Query: 192 LTKGQIENELKAYLGVMKIIWLP----------------------RGLFGMIHDGEAK-- 227
L+K +E ELK + + IIW R L D +K
Sbjct: 164 LSKQLLEKELKKHFSLKNIIWFKEGLFGDDTDGHIDNIFCPIGNDRYLIASTEDKTSKNY 223
Query: 228 -------------------------------PRLAGTRLAASYVNFYIANGGIITPQFGD 256
++ L ASY+NFY ++ P+F
Sbjct: 224 FILRQAKELVEEHFSSINPNIEIIEIPLPSETQIDNKPLVASYINFYFCKNSLLIPKFNV 283
Query: 257 KKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPAI 302
++ D + + FP ++ IE + I GGGNIHC+T P I
Sbjct: 284 EE-DLQVYDIFQSLFPSKKIKMIETSN-INYGGGNIHCVTMNMPKI 327
>gi|416115113|ref|ZP_11593981.1| Agmatine deiminase [Campylobacter concisus UNSWCD]
gi|384577905|gb|EIF07179.1| Agmatine deiminase [Campylobacter concisus UNSWCD]
Length = 322
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 151/335 (45%), Gaps = 72/335 (21%)
Query: 16 AEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVT-VCASAAQWENA 74
AEWE ++ P + + ++ L + ++ A++ +E V +C A + A
Sbjct: 5 AEWEEQELLFLSLPHSKSDWEPYLEEILVG---YEELVAAVTPYEKVVLICPDEANF--A 59
Query: 75 RSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGC 134
R + +N+ +++ + +W RD G V K S D+ FN+WGG
Sbjct: 60 RFKKFKNVEFVKLDTDDTWIRDYGMIDVCTKDGVKS---------YDFKFNAWGGKFKSS 110
Query: 135 YRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTK 194
+D +++L++A KI T+ P M+LEGGS+ +G+G LTT +CLLN+NRN L+K
Sbjct: 111 -KDDAINLELA-KIYKTKLEPV---DMILEGGSVEFNGDGVLLTTTKCLLNENRNSSLSK 165
Query: 195 GQIENELKAYLGVMKIIWLPRGL------------------------------------- 217
QIE +LK G+ +IIWL G
Sbjct: 166 EQIEEKLKNLFGLKRIIWLENGFIKGDDTDSHIDTLARFITPDTIAYASCDDKSDEHFEE 225
Query: 218 ------------FGMIHDGEAKPRL-AGTRLAASYVNFYIANGGIITPQFGDKKWDGEAV 264
F ++ KP+ G RL +Y NF NG +I P + D+ D + +
Sbjct: 226 LKKMEDELKKTGFKLLALPLPKPKFYDGKRLGCTYANFIFINGALIVPTYNDEN-DEKVL 284
Query: 265 RVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQ 299
+L++A P +++G+ + V G++HC +Q +
Sbjct: 285 NLLARALPDRKIIGV-NSLVFVRQNGSLHCSSQNR 318
>gi|436836856|ref|YP_007322072.1| Agmatine deiminase [Fibrella aestuarina BUZ 2]
gi|384068269|emb|CCH01479.1| Agmatine deiminase [Fibrella aestuarina BUZ 2]
Length = 353
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 112/228 (49%), Gaps = 22/228 (9%)
Query: 6 TPALHGYLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQR-VFAKVATAISKFEPVTV 64
TPA G+ PAEW PH W+ WP +W + L + AIS+ EPV +
Sbjct: 10 TPAQQGFFFPAEWHPHVATWLSWP---HTDASWSRERLELMMPAYLDFIKAISESEPVCI 66
Query: 65 CA-SAAQWENARSQL------PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKV 117
A + + A+ +L + I ++ N SW RD GP ++N ++
Sbjct: 67 NAHNDVIIQQAKMRLLMAGANMDRITLLPFPTNDSWCRDHGPAFLINPATKERMI----- 121
Query: 118 AGIDWNFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCL 177
++W +N+WGG Y + D + I +L +V+EGGS+ +G GT L
Sbjct: 122 --VNWGYNAWGGK----YPPYDKDDLIPTAIAHYRKLDYVTPGIVMEGGSVEFNGAGTVL 175
Query: 178 TTEECLLNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGE 225
T+ CLLNKNRNP+L++ QIE L Y GV +++W+ G+ G DG
Sbjct: 176 TSRACLLNKNRNPNLSQAQIEQYLCDYYGVKQVLWVEDGIVGDDTDGH 223
>gi|358387477|gb|EHK25071.1| hypothetical protein TRIVIDRAFT_127556, partial [Trichoderma virens
Gv29-8]
Length = 344
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 17 EWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENARS 76
EW+P S+ + WP L ++ + A + +A A++ F+ + + ++E A S
Sbjct: 1 EWQPQSKTILAWPGLEGILQDYPERLAKATHEVSTIAQAVAHFQGAILAVGSERYEEAES 60
Query: 77 QL-------PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
P + I+ W RD PT VV SS + VAG+DWNFN WG
Sbjct: 61 YFKGIGTPFPIELYKIDGKSMDVWLRDLAPTFVVK----SSAGEKDSVAGLDWNFNGWGN 116
Query: 130 VDDGCYRDWSLDLQV-ARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNR 188
+ + QV A+ L R S+V EGGS+ DG GT L TE ++N NR
Sbjct: 117 ------KYLTPTTQVFAKTFLKDYHFDRIETSIVTEGGSLETDGNGTLLITESSIVNDNR 170
Query: 189 NPHLTKGQIENELKAYLGVMKIIWLP 214
NP ++ +IE ELK YLG+ KIIW+P
Sbjct: 171 NPGKSREKIETELKGYLGIDKIIWIP 196
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
R SYVN+ + NGGII PQFGD D A+R + + + E+ GG +H
Sbjct: 277 RAVRSYVNYLLVNGGIILPQFGDPAHDAAAIRAVQGLYGDERRIFPVLIEELPRLGGGVH 336
Query: 294 CITQQQP 300
C TQ+ P
Sbjct: 337 CTTQEVP 343
>gi|320353257|ref|YP_004194596.1| agmatine deiminase [Desulfobulbus propionicus DSM 2032]
gi|320121759|gb|ADW17305.1| agmatine deiminase [Desulfobulbus propionicus DSM 2032]
Length = 341
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 104/213 (48%), Gaps = 24/213 (11%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
+PAEWEP + WP + +WRDD Q VF + AIS+FE V + A +
Sbjct: 5 LPAEWEPQDGVLLAWP---HQETDWRDDLAAVQAVFVNIVRAISRFERVLIVAPEIEPVR 61
Query: 74 AR----SQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGG 129
AR S + +R+ M+ N +W RD GP + + P V +D+ FN+WG
Sbjct: 62 ARLHADSVDLQRVRLYPMATNDTWARDFGPITIFENGT-------PVV--LDFGFNAWG- 111
Query: 130 VDDGCYRDWSLDLQVARKILSTERLPRFP---HSMVLEGGSIHVDGEGTCLTTEECLLNK 186
LD Q+ K+ R P ++LEGGSI DG GT LTT CL +
Sbjct: 112 ----LKFAADLDNQITGKLTRLGGFGRCPVRIPGLILEGGSIESDGAGTLLTTSTCLQSP 167
Query: 187 NRNPHLTKGQIENELKAYLGVMKIIWLPRGLFG 219
NRNPHL +G IE L LGV +++WL G
Sbjct: 168 NRNPHLDRGGIERALADLLGVSRVLWLDNGYLA 200
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 232 GTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGN 291
G RL A+Y NF + NG ++ P + D + D A+ +L+ FP E++ I+ R +++ G+
Sbjct: 270 GQRLPATYANFLVINGAVLMPTYHDPQ-DAAALEILAGVFPDREIIAID-CRPLIVQHGS 327
Query: 292 IHCITQQQP 300
+HC+T Q P
Sbjct: 328 LHCVTMQIP 336
>gi|400594487|gb|EJP62329.1| putative agmatine deiminase [Beauveria bassiana ARSEF 2860]
Length = 371
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 106/217 (48%), Gaps = 22/217 (10%)
Query: 12 YLMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAK----VATAISKFEPVTVCAS 67
+ PAEWE + M WP D + DD + K +A A++ FEPVT+ +
Sbjct: 9 FFRPAEWERQAGVIMAWPAAAN--DAYLDDDKQGLKDVTKDITTIAEAVALFEPVTLVVT 66
Query: 68 AAQWENARSQLPENIRVIEMSMNGS-----WFRDTGPTIVVNKSSASSGAQAPKVAGIDW 122
+ E A S+ + + +NG W RD PT VVN ++ +D+
Sbjct: 67 PERLEEAESRFKRAKNITLLPINGYPKLDLWMRDMAPTYVVNDDPNEDA----RLHAVDY 122
Query: 123 NFNSWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEEC 182
NFN WGG R +AR + + +P S+V EGGS+ VDG+GT L TE
Sbjct: 123 NFNGWGGKYPTGTRSC-----LARIVAAHSGIPVVASSLVAEGGSLEVDGDGTLLITESS 177
Query: 183 LLNKNRNPHLTKGQIENELKAYLGVMKIIWLP--RGL 217
+L NRNP KG +E EL LGV KIIWLP RGL
Sbjct: 178 VLIDNRNPGRGKGWVEEELYRTLGVDKIIWLPGRRGL 214
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 238 SYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQ 297
+YVN+ + N G+I PQFGD++ D A++++ + +PK E+ + ++ GG IHC TQ
Sbjct: 306 TYVNYLVVNDGVIFPQFGDRRADKAALKIIQELYPKREIEPV-YMYDLPFYGGGIHCSTQ 364
Query: 298 QQPAIPTN 305
+ P IPTN
Sbjct: 365 EIP-IPTN 371
>gi|358396665|gb|EHK46046.1| hypothetical protein TRIATDRAFT_299535 [Trichoderma atroviride IMI
206040]
Length = 364
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 106/206 (51%), Gaps = 16/206 (7%)
Query: 16 AEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENAR 75
AEW PH + + WP L ++ + A + + +A AI +FEPVTV A + E A+
Sbjct: 10 AEWTPHRRVILAWPGLEGILKDYPEMLAKATQEVSTLAAAIGQFEPVTVVVGAERIEEAQ 69
Query: 76 SQL-------PENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWG 128
+ P R E S W RD P V+ + SS V G+D+NFN WG
Sbjct: 70 AHFADVNTPFPIETRQFEGSEMDVWTRDFAPVFVIKEGPGSSR----NVVGVDYNFNGWG 125
Query: 129 GVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNR 188
Y ++ + A+K LS E S+V EGG++ DG+GT L TE ++N NR
Sbjct: 126 D----KYPTPTI-TEFAKKFLSEENYGWIETSIVTEGGALETDGDGTLLVTESSIVNDNR 180
Query: 189 NPHLTKGQIENELKAYLGVMKIIWLP 214
NP ++ +IE+EL LGV K+IW+P
Sbjct: 181 NPGKSRQEIEDELIRTLGVEKVIWIP 206
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%)
Query: 234 RLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIH 293
R SYVN+++ GG+I PQFGD D A+RV Q F + ++ ++ + GG IH
Sbjct: 295 RAVRSYVNYFLPIGGVILPQFGDPAHDAAAIRVAQQVFGEERMIYPVLIEQLPILGGGIH 354
Query: 294 CITQQQPAIP 303
C TQ+ P P
Sbjct: 355 CATQEVPLFP 364
>gi|423299948|ref|ZP_17277973.1| hypothetical protein HMPREF1057_01114 [Bacteroides finegoldii
CL09T03C10]
gi|408473757|gb|EKJ92279.1| hypothetical protein HMPREF1057_01114 [Bacteroides finegoldii
CL09T03C10]
Length = 371
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 151/354 (42%), Gaps = 88/354 (24%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWEN 73
+PAEW S + WP +W Q+ F +A I+K E + + + E
Sbjct: 36 LPAEWYTQSGIQLTWP---HAGTDWAYMLEEVQQCFINIAQEIAKRELLLIVTP--EPEK 90
Query: 74 ARSQLP-----ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWG 128
+ Q+ N+R ++ + N +W RD G +++ + S +D+ FN WG
Sbjct: 91 VKQQIAATVNMNNVRFLQCATNDTWARDHGAITMIDAGTPSL---------LDFAFNGWG 141
Query: 129 GVDDGCYRDWSLDLQVARKI-----LSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECL 183
LD Q+ ++ L+ + + R +LEGGSI DG GT LTT ECL
Sbjct: 142 -----LKYASELDNQITKQAVEAGALNGQYVNRL--DFILEGGSIESDGMGTLLTTSECL 194
Query: 184 LNKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL-------------------------- 217
L+ NRN L + +IE+ LK+ + +++WL G
Sbjct: 195 LSSNRNERLNQVEIEDYLKSVFHLQQVLWLDHGYLAGDDTDSHIDTLARFCSTDTIAYVK 254
Query: 218 --------FGMIHDGEAKPR----LAGT------------------RLAASYVNFYIANG 247
+G +H E + + LAG RL A+Y NF I N
Sbjct: 255 CEDKEDEHYGALHAMEEQLKTFRTLAGAPYRLLALPMADKIEEDGERLPATYANFLILND 314
Query: 248 GIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
I+ P + + D +A VL QAFP ++VGI+ R ++ G++HC+T Q P
Sbjct: 315 AILYPTYNQPQNDKKAGEVLQQAFPGRQIVGID-CRALIKQHGSLHCVTMQYPT 367
>gi|393788169|ref|ZP_10376300.1| hypothetical protein HMPREF1068_02580 [Bacteroides nordii
CL02T12C05]
gi|392656382|gb|EIY50021.1| hypothetical protein HMPREF1068_02580 [Bacteroides nordii
CL02T12C05]
Length = 371
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 151/353 (42%), Gaps = 84/353 (23%)
Query: 13 LMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWE 72
+PAEW P S + WP +W Q F +A I+K E + + + E
Sbjct: 35 FLPAEWYPQSGVQLTWP---HAGTDWAYMLDEVQECFVNIANEIAKRELLLIVTP--EPE 89
Query: 73 NARSQLP-----ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSW 127
+ Q+ EN+R ++ N +W RD G +++ AP + +D+ FN W
Sbjct: 90 EVKKQIAATVNMENVRFLKCGTNDTWARDHGAITMMD-------VDAPSL--LDFTFNGW 140
Query: 128 GGVDDGCYRDWSLDLQVARKILSTERLP-RFPHSM--VLEGGSIHVDGEGTCLTTEECLL 184
G LD Q+ R+ + L R+ + + VLEGGSI DG GT LTT ECLL
Sbjct: 141 G-----LKFASDLDNQITRRAIENGVLKGRYVNRLGFVLEGGSIESDGMGTLLTTSECLL 195
Query: 185 NKNRNPHLTKGQIENELKAYLGVMKIIWLPRGL--------------------------- 217
+ NRN + K +IE LK+ + +++WL G
Sbjct: 196 SPNRNGQMNKVEIEEYLKSVFHLQQVLWLDHGYLAGDDTDSHIDTLARLCPADTIVYVQC 255
Query: 218 -------FGMIHDGEAKPR----LAGT--RLAA----------------SYVNFYIANGG 248
+ +H E + + LAG RL A +Y NF I N
Sbjct: 256 EDEKDEHYKSLHAMEEQLKTFRTLAGESYRLLALPMADEVQEEGERLPATYANFLILNDA 315
Query: 249 IITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
++ P + + D A VL +AFP Y+++GI+ R ++ G++HC+T Q P
Sbjct: 316 VLYPTYDQPEKDKRAEEVLQEAFPGYDIIGID-CRALIRQHGSLHCVTMQYPT 367
>gi|395491489|ref|ZP_10423068.1| agmatine deiminase [Sphingomonas sp. PAMC 26617]
Length = 324
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 143/339 (42%), Gaps = 75/339 (22%)
Query: 15 PAEWEPHSQCWMGWPVRYERLDNWRDDALHAQR---VFAKVATAISKFEPVTVCASAAQW 71
PAEW PHS W+G+P E W +D A+ FA+ A + E V + A+ +
Sbjct: 7 PAEWAPHSAVWIGFPSHPEL---WVEDLEPARTEVVAFARAVHAEGRGERVLLVAADDEA 63
Query: 72 ENARSQLPENI-RVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGV 130
A + + ++ S W RDT P ++ + S+ D+ FN WGG
Sbjct: 64 ATAARAMAGDFAEIVVESFGDIWLRDTAPILLSDGSAR------------DFAFNGWGG- 110
Query: 131 DDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNP 190
D D + R++ ++ VLEGG+I DG G +TT +CLLN NRNP
Sbjct: 111 ----KYDLPGDSDIGRRLAEDRQIAVERCDWVLEGGAIDGDGTGLLVTTRQCLLNPNRNP 166
Query: 191 HLTKGQIENELKAYLGVMKIIWLPRGLFGMIHDGE-------------AKPRLAGTR--- 234
L + QIE L LG +I+WL GL DG A P A
Sbjct: 167 ALDQAQIEQRLHDDLGFAQILWLGDGLMHDHTDGHVDNLARFVAPGVLAIPEAADNDPNW 226
Query: 235 ---------------------------------LAASYVNFYIANGGIITPQFGDKKWDG 261
+ ASY+NFYI N ++ P +G D
Sbjct: 227 LVYQHAAAAAAEMPGIDLVRIPSPGRVLRDEEIVPASYMNFYIGNAAVVVPLYGAPN-DA 285
Query: 262 EAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQP 300
AV L FP +VVG+ RA I+ GGG+ HCI+QQ P
Sbjct: 286 AAVAALQALFPGRDVVGL-RADAILTGGGSFHCISQQIP 323
>gi|34498713|ref|NP_902928.1| hypothetical protein CV_3258 [Chromobacterium violaceum ATCC 12472]
gi|34104564|gb|AAQ60922.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 329
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDAL-HAQRVFAKVATAISKFEPVTVCASAAQWE 72
MP E PH+ WM + L W L +R A+VA+AI+ FEPV + A + +
Sbjct: 1 MPDEGAPHAATWMAFG---PSLSVWGARLLPEVRRDLARVASAIAAFEPVRMLARENELD 57
Query: 73 NARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDD 132
A + ++ ++ W RD+GP V K+ A +A +D+NFN WGG
Sbjct: 58 LAGRLCGSGVELVAQPLDDLWIRDSGPVFV--KTGAGG------MAAVDFNFNGWGG--- 106
Query: 133 GCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHL 192
+ D +VA + +VLEGG I VDGEGT + TE C+LN NRNP
Sbjct: 107 --KQAHGRDARVAGFVAGRAGALPLRSGLVLEGGGIEVDGEGTAIITESCVLNANRNPGW 164
Query: 193 TKGQIENELKAYLGVMKIIWLP 214
+K Q E EL+ LGV K+IWLP
Sbjct: 165 SKAQCEGELRRVLGVEKVIWLP 186
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 227 KPRLAGTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIV 286
+P +AA Y+NFY+ NG +I +FGD + D A L + FP+ EVV + I
Sbjct: 256 RPEYEDDEMAAGYINFYVCNGAVIALEFGDARADRNARSALRELFPEREVVQLN-IDAIA 314
Query: 287 LGGGNIHCITQQQPA 301
GGG IHC TQQQPA
Sbjct: 315 AGGGGIHCATQQQPA 329
>gi|381173197|ref|ZP_09882302.1| putative uncharacterized protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380686358|emb|CCG38789.1| putative uncharacterized protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 344
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 149/350 (42%), Gaps = 79/350 (22%)
Query: 14 MPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCAS------ 67
PAEWEP S + WP +W + + + + TAIS+FEPV +C +
Sbjct: 7 FPAEWEPQSAVLLAWP---HAGTDWAERLADVEETYIALVTAISRFEPVVICVADDDLQI 63
Query: 68 --AAQWENARSQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFN 125
A+ +AR + +R + + N +W RD+GP + ++ +D+ F
Sbjct: 64 YAEARLRSARVDM-TRVRFVIAAYNDTWLRDSGPITLRQEAGFRL---------MDFRFT 113
Query: 126 SWGGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECL-- 183
WGG + D + A ++ ++ LEGG+I DG GT LTT +CL
Sbjct: 114 GWGGKFEASLDDQLVSSLDAAQVFVPAQVETV--DFALEGGAIETDGAGTLLTTWKCLHE 171
Query: 184 -----------------LNKNRNPHLTKGQIENE--------LKAYLGVMKIIWLPRGLF 218
L + R L G +E + L + G I++ G+
Sbjct: 172 RHPQRTRESLSSDLATWLAQERVLWLDHGYLEGDDTDAHIDTLARFAGPDAIVYQGCGVA 231
Query: 219 GMIH-----------------DGE---------AKPRL-AGTRLAASYVNFYIANGGIIT 251
H DG+ A+P L G RLAASY NF I NG ++
Sbjct: 232 SDSHYVELQAMGAELAALRKADGQPYRLFVLPWAQPILDEGRRLAASYANFLIVNGAVLM 291
Query: 252 PQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
P +GD D A VL+QAFP +E+V + R ++ G++HC+T Q PA
Sbjct: 292 PAYGDAA-DATAQAVLAQAFPHHEIVPVP-CRALIWQNGSLHCLTMQLPA 339
>gi|329960000|ref|ZP_08298496.1| hypothetical protein HMPREF9446_00051 [Bacteroides fluxus YIT
12057]
gi|328533134|gb|EGF59903.1| hypothetical protein HMPREF9446_00051 [Bacteroides fluxus YIT
12057]
Length = 370
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 146/350 (41%), Gaps = 78/350 (22%)
Query: 13 LMPAEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWE 72
L+PAEW S + WP +W Q F +A I+ E + V + E
Sbjct: 35 LLPAEWALQSGVQLTWP---HAGTDWAYMLDEVQECFVAIAREIALREKLLVVTP--EPE 89
Query: 73 NARSQLP-----ENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSW 127
+ + Q+ +N+R + N +W RD G +++ A+ P + +D+ FN W
Sbjct: 90 DVKRQIAAVVNMDNVRFFKCGTNDTWARDHGAITMLD-------AEGPSL--LDFKFNGW 140
Query: 128 GGVDDGCYRDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKN 187
G + V +L R VLEGGSI DG GT LTT ECLL+ N
Sbjct: 141 GLKFASDKDNLITRHAVEAGMLQGRYTNRL--GFVLEGGSIESDGMGTLLTTSECLLSPN 198
Query: 188 RNPHLTKGQIENELKAYLGVMKIIWLPRGL------------------------------ 217
RN + + +IE L++ + +++WL G
Sbjct: 199 RNGQMNRVEIEEYLRSVFHLERVLWLDHGYLAGDDTDSHIDTLARFCSPNTIAYVQCTDV 258
Query: 218 ----FGMIH------------DGEAKPRLA----------GTRLAASYVNFYIANGGIIT 251
+G +H DGE LA G RL A+Y NF I N ++
Sbjct: 259 RDEHYGELHKMEEQLKTFRTLDGEPYRLLALPMADRIEEDGERLPATYANFLIMNDAVLY 318
Query: 252 PQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGNIHCITQQQPA 301
P +G + D A VL +AFP +E+VGI+ R ++ G++HC+T Q P
Sbjct: 319 PTYGQPENDARAKEVLHEAFPDHEIVGID-CRALIRQHGSLHCVTMQYPV 367
>gi|326775409|ref|ZP_08234674.1| Agmatine deiminase [Streptomyces griseus XylebKG-1]
gi|326655742|gb|EGE40588.1| Agmatine deiminase [Streptomyces griseus XylebKG-1]
Length = 384
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 109/198 (55%), Gaps = 17/198 (8%)
Query: 16 AEWEPHSQCWMGWPVRYERLDNWRDDALHAQRVFAKVATAISKFEPVTVCASAAQWENAR 75
AEW+ H++ +M WP E + W +D + + A++A A++++E V + A Q + A+
Sbjct: 54 AEWDSHARTFMSWPA-LESV--WEEDLPYVREDIARIARAVAEYEYVVMMARPDQRKAAQ 110
Query: 76 SQLPENIRVIEMSMNGSWFRDTGPTIVVNKSSASSGAQAPKVAGIDWNFNSWGGVDDGCY 135
+ VI ++++ W RDT P V + +V G+D+NFN WG
Sbjct: 111 RACGSQVEVIPLAVDDMWARDTVPVFV---------EEGGEVIGVDFNFNGWGD-----K 156
Query: 136 RDWSLDLQVARKILSTERLPRFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKG 195
++ + D +V R +LS + R +V EGGS DGEGT L TE ++N+NRNP L++
Sbjct: 157 QEHTNDARVGRTLLSKYGIERVEAPLVAEGGSFETDGEGTLLITESSIVNENRNPGLSRD 216
Query: 196 QIENELKAYLGVMKIIWL 213
+E +L LGV K++WL
Sbjct: 217 AVEADLVETLGVEKVVWL 234
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 232 GTRLAASYVNFYIANGGIITPQFGDKKWDGEAVRVLSQAFPKYEVVGIERAREIVLGGGN 291
G ++Y NFY+AN + P+FGD+K D A +L + FP +VV + + GGG
Sbjct: 312 GDDFVSTYANFYVANDAVFMPRFGDRKADDRARGILREQFPDRDVVPVV-IDTVASGGGG 370
Query: 292 IHCITQQQPAIPTN 305
IHC T QP P +
Sbjct: 371 IHCATHDQPGAPAD 384
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,305,803,334
Number of Sequences: 23463169
Number of extensions: 222901068
Number of successful extensions: 420498
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1818
Number of HSP's successfully gapped in prelim test: 110
Number of HSP's that attempted gapping in prelim test: 410146
Number of HSP's gapped (non-prelim): 3864
length of query: 310
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 168
effective length of database: 9,027,425,369
effective search space: 1516607461992
effective search space used: 1516607461992
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)