Query 021623
Match_columns 310
No_of_seqs 254 out of 2158
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 04:25:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021623.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021623hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02864 enoyl-CoA hydratase 100.0 2E-62 4.4E-67 447.1 38.1 309 1-310 2-310 (310)
2 KOG1206 Peroxisomal multifunct 100.0 3.8E-40 8.1E-45 276.7 6.1 262 22-305 5-267 (272)
3 cd03448 HDE_HSD HDE_HSD The R 99.9 1.1E-25 2.4E-30 178.6 15.7 120 184-303 1-121 (122)
4 cd03447 FAS_MaoC FAS_MaoC, the 99.9 2.2E-25 4.7E-30 178.1 17.3 117 190-306 5-126 (126)
5 PF13452 MaoC_dehydrat_N: N-te 99.9 4.9E-26 1.1E-30 183.5 10.1 129 11-149 1-132 (132)
6 PRK13691 (3R)-hydroxyacyl-ACP 99.9 1E-24 2.3E-29 181.8 14.7 147 5-159 1-148 (166)
7 cd03453 SAV4209_like SAV4209_l 99.9 1.5E-22 3.2E-27 162.2 16.6 110 193-304 10-127 (127)
8 cd03455 SAV4209 SAV4209 is a S 99.9 1.5E-22 3.2E-27 161.3 14.7 109 194-304 10-123 (123)
9 PRK13692 (3R)-hydroxyacyl-ACP 99.9 1.2E-22 2.5E-27 168.5 14.4 146 5-158 1-147 (159)
10 COG3777 Uncharacterized conser 99.9 2.1E-22 4.4E-27 171.2 10.6 258 9-301 6-271 (273)
11 COG2030 MaoC Acyl dehydratase 99.9 2.4E-21 5.1E-26 161.0 13.5 125 182-306 21-155 (159)
12 cd03452 MaoC_C MaoC_C The C-t 99.9 3.8E-21 8.1E-26 157.0 11.8 110 194-306 17-139 (142)
13 cd03449 R_hydratase (R)-hydrat 99.9 2.3E-20 4.9E-25 149.2 15.7 110 194-304 12-127 (128)
14 PRK13693 (3R)-hydroxyacyl-ACP 99.9 4.4E-20 9.5E-25 150.5 16.6 110 194-305 21-141 (142)
15 cd03441 R_hydratase_like (R)-h 99.8 3.6E-20 7.9E-25 147.6 15.6 112 192-303 7-126 (127)
16 cd03451 FkbR2 FkbR2 is a Strep 99.8 2E-20 4.3E-25 153.3 12.3 116 193-308 19-145 (146)
17 PF01575 MaoC_dehydratas: MaoC 99.8 1E-20 2.3E-25 150.4 8.7 89 192-280 15-103 (122)
18 cd03446 MaoC_like MoaC_like 99.8 1.7E-19 3.7E-24 146.7 13.9 109 194-304 17-139 (140)
19 PRK08190 bifunctional enoyl-Co 99.8 4.5E-19 9.7E-24 171.0 16.3 116 193-309 24-145 (466)
20 cd03454 YdeM YdeM is a Bacillu 99.8 1.1E-18 2.5E-23 141.9 12.8 110 194-304 16-138 (140)
21 cd03450 NodN NodN (nodulation 99.8 4.5E-18 9.8E-23 139.6 15.0 110 193-302 22-144 (149)
22 PRK13691 (3R)-hydroxyacyl-ACP 99.8 1.2E-17 2.6E-22 139.3 14.9 112 194-306 19-145 (166)
23 PRK13692 (3R)-hydroxyacyl-ACP 99.7 4.9E-17 1.1E-21 134.8 14.6 112 194-305 19-144 (159)
24 cd03450 NodN NodN (nodulation 99.7 6E-17 1.3E-21 132.9 10.7 143 4-155 4-147 (149)
25 cd03452 MaoC_C MaoC_C The C-t 99.7 1.3E-16 2.8E-21 130.2 11.2 133 12-157 6-140 (142)
26 cd03446 MaoC_like MoaC_like 99.7 3.6E-16 7.7E-21 127.1 11.8 132 12-154 6-139 (140)
27 TIGR02278 PaaN-DH phenylacetic 99.7 2.3E-16 5.1E-21 158.0 12.4 111 193-304 539-660 (663)
28 cd03454 YdeM YdeM is a Bacillu 99.7 4.5E-16 9.8E-21 126.6 10.1 133 12-156 5-140 (140)
29 PRK11563 bifunctional aldehyde 99.7 5.7E-16 1.2E-20 156.0 12.2 111 193-304 551-672 (675)
30 cd03451 FkbR2 FkbR2 is a Strep 99.7 9.5E-16 2.1E-20 125.4 10.8 134 12-157 8-144 (146)
31 cd03453 SAV4209_like SAV4209_l 99.6 2.7E-15 5.9E-20 120.0 10.0 125 13-152 1-125 (127)
32 cd03449 R_hydratase (R)-hydrat 99.6 1.9E-14 4.1E-19 114.8 10.7 125 13-154 3-127 (128)
33 cd03455 SAV4209 SAV4209 is a S 99.5 3.5E-14 7.6E-19 112.9 9.5 122 14-153 1-122 (123)
34 cd03441 R_hydratase_like (R)-h 99.5 2E-13 4.2E-18 108.6 10.8 120 21-152 6-125 (127)
35 PRK08190 bifunctional enoyl-Co 99.4 3.7E-13 8E-18 130.0 10.4 130 12-158 15-144 (466)
36 TIGR02278 PaaN-DH phenylacetic 99.4 2.5E-12 5.3E-17 129.2 9.8 131 12-155 529-661 (663)
37 PRK11563 bifunctional aldehyde 99.3 9.2E-12 2E-16 125.7 9.1 131 12-156 541-674 (675)
38 COG2030 MaoC Acyl dehydratase 99.3 3.8E-11 8.2E-16 99.7 10.4 134 12-156 21-155 (159)
39 cd03447 FAS_MaoC FAS_MaoC, the 99.2 4.2E-11 9.1E-16 95.6 9.3 116 22-153 7-123 (126)
40 PF13452 MaoC_dehydrat_N: N-te 99.0 5.4E-10 1.2E-14 89.7 6.7 105 193-298 12-131 (132)
41 PRK13693 (3R)-hydroxyacyl-ACP 99.0 3E-09 6.6E-14 86.6 9.1 116 12-144 10-130 (142)
42 PF01575 MaoC_dehydratas: MaoC 98.8 6E-10 1.3E-14 88.4 0.5 115 10-135 3-117 (122)
43 cd03448 HDE_HSD HDE_HSD The R 98.5 3.5E-07 7.7E-12 72.5 6.1 109 21-150 9-117 (122)
44 PRK04424 fatty acid biosynthes 98.3 1.2E-05 2.6E-10 68.4 12.2 79 226-305 100-181 (185)
45 PRK00006 fabZ (3R)-hydroxymyri 98.3 1.1E-05 2.4E-10 66.0 11.5 91 215-305 45-144 (147)
46 cd01288 FabZ FabZ is a 17kD be 98.3 1.1E-05 2.4E-10 64.2 11.2 92 213-304 28-129 (131)
47 PLN02864 enoyl-CoA hydratase 98.2 6.5E-06 1.4E-10 75.7 8.6 111 23-153 193-303 (310)
48 PRK13188 bifunctional UDP-3-O- 98.0 8.8E-05 1.9E-09 71.3 12.7 93 213-305 356-459 (464)
49 TIGR01750 fabZ beta-hydroxyacy 97.7 0.0008 1.7E-08 54.3 11.3 79 226-304 49-139 (140)
50 cd00493 FabA_FabZ FabA/Z, beta 97.5 0.003 6.4E-08 50.0 12.5 77 227-303 41-129 (131)
51 TIGR02286 PaaD phenylacetic ac 97.5 0.0036 7.7E-08 48.7 12.2 78 227-304 30-112 (114)
52 cd03440 hot_dog The hotdog fol 97.3 0.0064 1.4E-07 43.1 11.6 78 226-303 14-99 (100)
53 PF03061 4HBT: Thioesterase su 96.8 0.017 3.6E-07 41.1 9.5 68 229-296 3-78 (79)
54 cd03443 PaaI_thioesterase PaaI 96.6 0.054 1.2E-06 41.3 11.3 76 228-304 29-112 (113)
55 PRK00006 fabZ (3R)-hydroxymyri 96.6 0.021 4.5E-07 46.5 9.3 57 94-156 89-145 (147)
56 cd01289 FabA_like Domain of un 96.6 0.053 1.1E-06 43.7 11.5 54 254-307 79-138 (138)
57 cd03445 Thioesterase_II_repeat 96.4 0.082 1.8E-06 39.6 11.1 77 226-304 14-93 (94)
58 cd00586 4HBT 4-hydroxybenzoyl- 96.4 0.053 1.2E-06 40.4 10.3 58 93-155 51-108 (110)
59 TIGR02286 PaaD phenylacetic ac 96.4 0.046 9.9E-07 42.4 9.9 56 94-154 57-112 (114)
60 PF07977 FabA: FabA-like domai 96.3 0.073 1.6E-06 42.7 10.9 75 226-300 46-138 (138)
61 cd03440 hot_dog The hotdog fol 96.1 0.081 1.8E-06 37.2 9.4 58 91-153 42-99 (100)
62 TIGR01749 fabA beta-hydroxyacy 96.0 0.12 2.6E-06 43.3 11.1 85 225-309 70-168 (169)
63 cd00586 4HBT 4-hydroxybenzoyl- 96.0 0.21 4.5E-06 37.1 11.7 52 253-304 52-107 (110)
64 PRK10800 acyl-CoA thioesterase 96.0 0.17 3.6E-06 40.0 11.3 61 92-157 52-112 (130)
65 TIGR00369 unchar_dom_1 unchara 95.9 0.15 3.3E-06 39.5 10.8 76 228-304 33-116 (117)
66 PRK04424 fatty acid biosynthes 95.8 0.052 1.1E-06 46.1 8.2 56 94-155 126-181 (185)
67 PRK05174 3-hydroxydecanoyl-(ac 95.8 0.25 5.4E-06 41.5 11.9 84 226-309 74-171 (172)
68 PF13622 4HBT_3: Thioesterase- 95.6 0.25 5.5E-06 43.7 12.1 79 227-307 9-90 (255)
69 COG0764 FabA 3-hydroxymyristoy 95.5 0.31 6.7E-06 39.8 11.4 79 227-305 55-143 (147)
70 PF03061 4HBT: Thioesterase su 95.5 0.088 1.9E-06 37.2 7.4 50 93-147 30-79 (79)
71 cd03442 BFIT_BACH Brown fat-in 95.4 0.44 9.5E-06 36.7 11.5 78 229-306 24-113 (123)
72 cd01288 FabZ FabZ is a 17kD be 95.4 0.13 2.9E-06 40.4 8.7 56 94-155 75-130 (131)
73 TIGR01750 fabZ beta-hydroxyacy 95.3 0.096 2.1E-06 42.1 7.8 56 93-154 84-139 (140)
74 TIGR00369 unchar_dom_1 unchara 95.3 0.16 3.5E-06 39.4 8.8 55 94-154 62-116 (117)
75 PRK10800 acyl-CoA thioesterase 95.2 0.17 3.7E-06 39.9 8.9 53 252-304 53-109 (130)
76 COG2050 PaaI HGG motif-contain 95.1 0.39 8.5E-06 38.6 10.8 80 226-306 49-137 (141)
77 PRK11688 hypothetical protein; 95.0 0.28 6.1E-06 40.2 9.8 57 93-155 97-153 (154)
78 PRK11688 hypothetical protein; 95.0 0.5 1.1E-05 38.7 11.2 78 226-304 54-152 (154)
79 COG5496 Predicted thioesterase 94.8 1.2 2.6E-05 35.1 12.0 87 214-301 17-109 (130)
80 KOG1206 Peroxisomal multifunct 94.8 0.0082 1.8E-07 51.9 -0.0 81 22-117 156-237 (272)
81 cd00556 Thioesterase_II Thioes 94.7 0.59 1.3E-05 34.5 10.2 77 227-303 14-97 (99)
82 PF13279 4HBT_2: Thioesterase- 94.7 0.56 1.2E-05 36.2 10.3 62 93-158 43-106 (121)
83 COG0824 FcbC Predicted thioest 94.6 0.3 6.4E-06 39.3 8.8 52 254-305 58-112 (137)
84 cd03443 PaaI_thioesterase PaaI 94.6 0.6 1.3E-05 35.4 10.3 56 93-154 57-112 (113)
85 TIGR00189 tesB acyl-CoA thioes 94.6 0.32 6.9E-06 43.7 9.9 78 228-307 21-101 (271)
86 PRK10254 thioesterase; Provisi 94.5 0.98 2.1E-05 36.4 11.5 76 227-304 50-134 (137)
87 cd01287 FabA FabA, beta-hydrox 94.5 0.52 1.1E-05 38.6 10.0 75 226-300 48-141 (150)
88 PLN02322 acyl-CoA thioesterase 94.4 0.94 2E-05 37.3 11.4 78 227-304 42-132 (154)
89 PF07977 FabA: FabA-like domai 94.4 0.25 5.4E-06 39.6 8.0 54 93-149 83-137 (138)
90 cd01287 FabA FabA, beta-hydrox 94.4 0.43 9.4E-06 39.1 9.3 60 93-154 85-145 (150)
91 cd03442 BFIT_BACH Brown fat-in 94.3 0.51 1.1E-05 36.3 9.4 54 100-157 57-114 (123)
92 PRK10293 acyl-CoA esterase; Pr 94.3 1 2.3E-05 36.1 11.2 77 227-304 50-134 (136)
93 TIGR02799 thio_ybgC tol-pal sy 94.2 0.95 2.1E-05 35.2 10.9 60 93-158 52-111 (126)
94 TIGR02799 thio_ybgC tol-pal sy 94.0 0.59 1.3E-05 36.4 9.2 52 253-304 53-107 (126)
95 COG0824 FcbC Predicted thioest 93.9 1.3 2.7E-05 35.6 11.1 60 93-158 56-115 (137)
96 PLN02647 acyl-CoA thioesterase 93.9 6.6 0.00014 37.9 19.1 59 99-158 150-211 (437)
97 COG2050 PaaI HGG motif-contain 93.4 0.84 1.8E-05 36.7 9.4 57 95-156 81-137 (141)
98 PRK13188 bifunctional UDP-3-O- 93.3 0.46 1E-05 46.0 8.8 58 94-156 403-460 (464)
99 PRK10526 acyl-CoA thioesterase 93.2 0.84 1.8E-05 41.5 10.0 80 227-308 31-113 (286)
100 PRK10254 thioesterase; Provisi 93.1 1.6 3.5E-05 35.1 10.4 60 92-157 78-137 (137)
101 PF01643 Acyl-ACP_TE: Acyl-ACP 93.0 2.7 5.9E-05 37.6 12.9 61 93-158 60-121 (261)
102 PLN02370 acyl-ACP thioesterase 93.0 9 0.0002 36.8 21.0 61 93-157 196-256 (419)
103 COG1607 Acyl-CoA hydrolase [Li 92.9 2.4 5.2E-05 34.9 11.1 50 230-279 31-83 (157)
104 PF12119 DUF3581: Protein of u 92.8 0.57 1.2E-05 40.0 7.5 66 194-275 15-81 (218)
105 cd00493 FabA_FabZ FabA/Z, beta 92.8 1.2 2.7E-05 34.7 9.3 52 93-150 75-126 (131)
106 TIGR00051 acyl-CoA thioester h 92.5 2.6 5.7E-05 31.9 10.6 57 94-155 49-105 (117)
107 PRK10293 acyl-CoA esterase; Pr 92.2 2 4.3E-05 34.5 9.7 57 93-155 79-135 (136)
108 cd00556 Thioesterase_II Thioes 92.2 1.2 2.5E-05 32.9 8.0 56 94-154 43-98 (99)
109 COG1946 TesB Acyl-CoA thioeste 91.6 1 2.3E-05 40.6 8.2 65 89-158 221-285 (289)
110 PRK10694 acyl-CoA esterase; Pr 91.4 5.3 0.00011 31.9 11.4 51 229-279 28-81 (133)
111 PF13279 4HBT_2: Thioesterase- 91.3 2.2 4.7E-05 32.9 9.0 52 253-304 44-102 (121)
112 PLN02322 acyl-CoA thioesterase 90.8 3.6 7.7E-05 33.8 10.1 60 93-156 70-134 (154)
113 PRK07531 bifunctional 3-hydrox 90.8 2.7 5.8E-05 41.3 11.1 60 93-157 395-454 (495)
114 TIGR00051 acyl-CoA thioester h 90.8 2.5 5.4E-05 32.1 8.9 48 253-300 49-100 (117)
115 TIGR02447 yiiD_Cterm thioester 89.9 5.2 0.00011 32.1 10.2 52 253-304 70-135 (138)
116 COG1607 Acyl-CoA hydrolase [Li 88.7 4.3 9.4E-05 33.4 8.9 60 99-158 62-121 (157)
117 KOG3328 HGG motif-containing t 88.1 4.7 0.0001 32.7 8.5 76 228-303 54-137 (148)
118 PF02551 Acyl_CoA_thio: Acyl-C 87.2 7.1 0.00015 31.1 9.0 58 89-152 71-129 (131)
119 PRK10694 acyl-CoA esterase; Pr 86.9 5.1 0.00011 32.0 8.2 56 99-158 60-122 (133)
120 PRK05174 3-hydroxydecanoyl-(ac 86.8 7.5 0.00016 32.6 9.5 58 94-154 105-163 (172)
121 TIGR00189 tesB acyl-CoA thioes 86.1 5.3 0.00011 35.7 8.9 60 92-156 212-271 (271)
122 PRK10526 acyl-CoA thioesterase 85.2 5 0.00011 36.5 8.3 59 94-157 226-284 (286)
123 cd01289 FabA_like Domain of un 85.1 11 0.00024 30.2 9.4 58 93-155 78-136 (138)
124 TIGR02447 yiiD_Cterm thioester 85.0 2.6 5.7E-05 33.8 5.7 58 93-155 69-136 (138)
125 PRK07531 bifunctional 3-hydrox 84.4 6.4 0.00014 38.7 9.3 51 254-304 397-451 (495)
126 PLN02868 acyl-CoA thioesterase 84.0 7.3 0.00016 37.3 9.3 78 228-307 158-238 (413)
127 COG0764 FabA 3-hydroxymyristoy 83.9 13 0.00027 30.4 9.3 59 92-155 85-143 (147)
128 TIGR01749 fabA beta-hydroxyacy 83.8 8.7 0.00019 32.1 8.5 56 95-153 103-159 (169)
129 cd03444 Thioesterase_II_repeat 83.2 9.3 0.0002 28.9 7.9 58 92-154 46-103 (104)
130 PF14539 DUF4442: Domain of un 80.1 6.9 0.00015 31.0 6.4 57 94-154 75-131 (132)
131 PLN02647 acyl-CoA thioesterase 76.3 20 0.00042 34.8 9.3 61 98-158 338-403 (437)
132 PF03756 AfsA: A-factor biosyn 68.8 35 0.00076 26.7 7.9 51 254-304 73-131 (132)
133 KOG3328 HGG motif-containing t 67.2 63 0.0014 26.3 8.8 61 93-158 81-142 (148)
134 PF12119 DUF3581: Protein of u 61.1 11 0.00025 32.3 3.7 46 21-76 12-59 (218)
135 PLN02370 acyl-ACP thioesterase 60.5 65 0.0014 31.0 9.2 51 253-303 197-252 (419)
136 PLN02868 acyl-CoA thioesterase 59.5 28 0.00061 33.3 6.6 56 94-154 357-412 (413)
137 PF13622 4HBT_3: Thioesterase- 56.1 89 0.0019 27.3 8.9 56 95-155 199-255 (255)
138 PF09500 YiiD_Cterm: Putative 55.2 93 0.002 25.2 8.0 79 224-302 46-139 (144)
139 PF14765 PS-DH: Polyketide syn 51.5 99 0.0021 27.4 8.6 59 93-156 229-288 (295)
140 PF03756 AfsA: A-factor biosyn 51.2 1.1E+02 0.0025 23.7 8.0 59 93-153 71-130 (132)
141 PF10989 DUF2808: Protein of u 50.7 79 0.0017 25.5 7.0 39 256-294 89-132 (146)
142 PF09500 YiiD_Cterm: Putative 46.7 1.6E+02 0.0034 23.9 8.6 60 92-155 74-142 (144)
143 COG1946 TesB Acyl-CoA thioeste 43.8 1.3E+02 0.0027 27.5 7.6 79 228-308 32-113 (289)
144 PF01643 Acyl-ACP_TE: Acyl-ACP 41.4 1.9E+02 0.0042 25.6 8.7 52 253-304 61-117 (261)
145 COG5496 Predicted thioesterase 38.4 2E+02 0.0044 22.8 9.7 58 92-155 56-113 (130)
146 PF01835 A2M_N: MG2 domain; I 35.7 1.1E+02 0.0024 22.4 5.3 41 260-301 4-55 (99)
147 PF14539 DUF4442: Domain of un 35.5 2.2E+02 0.0047 22.3 9.9 47 255-303 77-130 (132)
148 KOG3016 Acyl-CoA thioesterase 24.0 5.6E+02 0.012 23.4 8.7 77 227-305 37-116 (294)
149 COG3777 Uncharacterized conser 23.7 38 0.00083 30.0 1.0 83 24-120 165-249 (273)
150 PF14765 PS-DH: Polyketide syn 21.0 5.7E+02 0.012 22.4 11.4 79 225-306 36-127 (295)
151 cd03445 Thioesterase_II_repeat 20.4 3.5E+02 0.0076 19.7 7.8 50 98-153 43-92 (94)
No 1
>PLN02864 enoyl-CoA hydratase
Probab=100.00 E-value=2e-62 Score=447.11 Aligned_cols=309 Identities=74% Similarity=1.194 Sum_probs=267.7
Q ss_pred CCCcCCCChhhhcCCCCCCcceEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccceeeeccccCCCCCC
Q 021623 1 MAKSSGINPELLLSQKLPEQKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSG 80 (310)
Q Consensus 1 ~~~~~~~d~~~~vG~~~~~~~~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~ 80 (310)
|--..++|.++++|+++++ .++.|+++|+++||++||+++.+|+..++++|+||..||++++|||||++++.+......
T Consensus 2 ~~~~~~~~~~~~~g~~~p~-~~~~~~~~d~~lyAl~vG~~~~~~~d~~~l~~~ye~~g~~~~~a~PTf~~vl~~~~~~~~ 80 (310)
T PLN02864 2 MPPISPFDPDLVLAHKFPE-VTYSYTERDVALYALGVGACGRDAVDEDELKYVYHRDGQQFIKVLPTFASLFNLGSLDGF 80 (310)
T ss_pred CCCCCCCCHHHHhCCcCCC-eeEEECHHHHHHHHHhcCCCCCCCCChHHhhhhhccccCCCcccCCceeeeccccCcccc
Confidence 5556789999999999999 899999999999999999533444556789999997789999999999999986541111
Q ss_pred CCCCCCCCCCCceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEeccCC
Q 021623 81 AIDLPGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAGG 160 (310)
Q Consensus 81 ~~~~~~~~~~~~~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg~~~ 160 (310)
.+..|+++||+.++||++|+|++||||+++++|+++++|.++++||+|.+++++.++++.++|++||++++++++|+.++
T Consensus 81 ~~~~p~~~~d~~~lVHgeq~i~~~rPlp~~~~l~~~~~v~~v~dkG~ga~v~~~~~~~d~~~Ge~v~t~~st~~~Rg~gg 160 (310)
T PLN02864 81 GLDLPGLNYDPSLLLHGQQYIEIYKPIPSSASVRNKVSIAGLHDKGKAAILELETLSYEKDSGELLCMNRSTIFLRGAGG 160 (310)
T ss_pred cccCCCCCCChhheeeccceEEEECCCCCCCEEEEEEEEEEEEeCCCcEEEEEEEEEEeCCCCcEEEEEEEEEEEeCCCC
Confidence 13568889999999999999999999999999999999999999999998999988765479999999999999999998
Q ss_pred CCCCCCCCCCCcCCCCCcccCCCCCCCCceEeeecCHHHHHHHHHHhCCCCCCCCCHHHHhhCCCCCceechHHHHHHHH
Q 021623 161 FSNSSQPFSYSKYQTIPVSVVKIPKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAV 240 (310)
Q Consensus 161 ~~~~~~p~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~d~~~~~~~sgD~npiH~d~~~A~~~gf~~~i~hG~~~~~~~~ 240 (310)
+++++.|......+.......+.|++.|+.+.+..++.++.+||++|||+||||+|+++|+..||+++|+||||+++++.
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~p~~~pd~~~~~~t~~~~~~~a~lSGD~NPiH~d~~~A~~~gf~~~IaHGm~t~g~~~ 240 (310)
T PLN02864 161 FSNSSQPFSYSNYPTNQVSAVKIPKSQPDAVFEDQTQPSQALLYRLSGDYNPLHSDPMFAKVAGFTRPILHGLCTLGFAV 240 (310)
T ss_pred CCCCCCCccccccccccccccCCCCCCCCeEEeeccChhHHHHHHhhCCCCcccCCHHHHhhCCCCCceeccHHHHHHHH
Confidence 87665543211222222234567888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCceEEEEEEEECcCCCCCCEEEEEEEEECcEEEEEEEEecCCcEEEEEEEEEEeccCCC
Q 021623 241 RAIIKFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWLQGLRVIYQVKVKERNRSALSGFVDVHRLASSL 310 (310)
Q Consensus 241 ~~~~~~~~~g~~~~~~~~~~rf~~Pv~~gd~l~~~~~~~~~~v~~~~~~~~~g~~vl~g~a~v~~p~~~~ 310 (310)
+++.++.+++++..+.++++||.+||++||+|++++|..++.+.|++++|++|++|++|.++++.+.+||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~rF~~PV~pGdtl~~~~~~~~~~v~~~~~~~~~g~~vl~G~a~~~~~~~~~ 310 (310)
T PLN02864 241 RAVIKCFCNGDPTAVKTISGRFLLHVYPGETLVTEMWLEGLRVIYQTKVKERNKAVLSGYVDLRHLTSSL 310 (310)
T ss_pred HHHHhhhcCCCCceEEEEEEEEcCCccCCCEEEEEEEeCCCEEEEEEEEecCCeEEEEEEEEEecccCCC
Confidence 9988887778888888999999999999999999999888889999888889999999999999888876
No 2
>KOG1206 consensus Peroxisomal multifunctional beta-oxidation protein and related enzymes [Lipid transport and metabolism]
Probab=100.00 E-value=3.8e-40 Score=276.75 Aligned_cols=262 Identities=39% Similarity=0.661 Sum_probs=223.5
Q ss_pred eEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccceeeeccccCCCCCCCCCCCCCCCCCceeeeeeEEE
Q 021623 22 TFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPRLLLHGQQYM 101 (310)
Q Consensus 22 ~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~~~~vH~~~~~ 101 (310)
.+.++.+|.+.||+++|+ . ..|+.|+||+. ++|.+.|||.+++. .. ...+..+.-.++...++|++|-+
T Consensus 5 af~~~tkd~I~y~lg~g~-t-----~kd~~~~yeN~--~dF~~lPt~~v~p~-~~--~~~~~~~~d~~~~~~~lhgeqy~ 73 (272)
T KOG1206|consen 5 AFKYTTKDCILYALGLGA-T-----SKDLKYTYEND--PDFQVLPTFAVIPA-TA--TLLMDNLVDNFDYAMLLHGEQYF 73 (272)
T ss_pred hccccHHHHHHHHhcccc-c-----hhHHHHHhccC--ccceeccceeeehh-HH--HHHhhccchhHHHHHHHHHHHHH
Confidence 478999999999999996 2 34899999987 99999999999772 22 11123344468889999999999
Q ss_pred EEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEeccCCCCCCCCCCCCCcCCCCCcccC
Q 021623 102 ELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSVV 181 (310)
Q Consensus 102 ~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg~~~~~~~~~p~~~~~~~~~~~~~~ 181 (310)
+...+++..+.+...+++.++-+|++|.++..-.+.+ +++|.+...+.++.++||.+.+++++.+.. ..-.+
T Consensus 74 e~~~~l~~~g~l~t~~~~~~v~dkg~~a~v~~~~et~-d~~~k~i~~~~~stf~~g~~~~~~k~~~~~-------~~~av 145 (272)
T KOG1206|consen 74 ELCTTLPSNGTLKTLAKVLDVLDKGSGALVVGNFETY-DETGKLIAYNQGSTFIRGAGVFGGKRDGKR-------AKKAV 145 (272)
T ss_pred HHHccccccchhhhcceeEEeccCcceeEEEeeeeee-cccccchhhhcCceeEecccccCccccchh-------heeec
Confidence 9999999999999999999999999998888888876 589999999999999999988876643321 12234
Q ss_pred CCCCCCCceEeeecCHHHHHHHHHHhCCCCCCCCCHHHHhhCCCCCceechHHHHHHHHHHHHHHhhcCCCceEEEEEEE
Q 021623 182 KIPKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSR 261 (310)
Q Consensus 182 ~~p~~~p~~~~~~~~~~d~~~~~~~sgD~npiH~d~~~A~~~gf~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~r 261 (310)
.+|.+.|+++.+..+..|+..|||+|||+||||+||+.|+..||+.+|+||||++++..+.+..++ +++.+..+++|
T Consensus 146 ~~p~r~pd~~v~~~ts~DqaAlyrlsgD~NPLHiDPe~A~~agFetpilHGlc~lg~~~riv~a~~---~~a~y~~~kvr 222 (272)
T KOG1206|consen 146 QVPHRDPDAVVERFTSEDQAALYRLSGDHNPLHIDPESALEAGFETPILHGLCTLGFSARIVGAQF---PPAVYKAQKVR 222 (272)
T ss_pred cCCCcCcchheeecchhhHHHHHHhcCCCCccccCHHHHHhcCCCCchhhhHHHhhhhHHHHHHhc---Cchhhheeeee
Confidence 588899999999999999999999999999999999999999999999999999999999998875 47788999999
Q ss_pred ECcCCCCCCEEEEEEEEECcEEEEEEEEecCCcEEEEE-EEEEEe
Q 021623 262 FLLHVYPGETLVTEMWLQGLRVIYQVKVKERNRSALSG-FVDVHR 305 (310)
Q Consensus 262 f~~Pv~~gd~l~~~~~~~~~~v~~~~~~~~~g~~vl~g-~a~v~~ 305 (310)
|++||+|||+|....|..+.++.|+..+...|+.|+++ .+.+.+
T Consensus 223 F~spV~pGdtll~~~wK~g~r~~fqt~vv~t~~~v~sna~iDl~~ 267 (272)
T KOG1206|consen 223 FSSPVGPGDTLLVLVWKQGLRITFQTYVVETGKIVISNAVIDLEA 267 (272)
T ss_pred ecCCCCCchhHHHHHHhhhceeEEEEEEEEEEEEEeeccEEehhh
Confidence 99999999999999999888899988766788888884 444433
No 3
>cd03448 HDE_HSD HDE_HSD The R-hydratase-like hot dog fold of the 17-beta-hydroxysteriod dehydrogenase (HSD), and Hydratase-Dehydrogenase-Epimerase (HDE) proteins. Other enzymes with this fold include MaoC dehydratase, and the fatty acid synthase beta subunit.
Probab=99.94 E-value=1.1e-25 Score=178.62 Aligned_cols=120 Identities=60% Similarity=0.927 Sum_probs=106.7
Q ss_pred CCCCCceEeeecCHHHHHHHHHHhCCCCCCCCCHHHHhhCCCCCceechHHHHHHHHHHHHHHhhcCCCceEEEEEEEEC
Q 021623 184 PKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFL 263 (310)
Q Consensus 184 p~~~p~~~~~~~~~~d~~~~~~~sgD~npiH~d~~~A~~~gf~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~ 263 (310)
|+++|+.+....+..+...+|++|||+||||+|+++|+..||+++|+|||++++++.+++.+++.++.+..+..+++||.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~SgD~nPiH~d~e~A~~~g~~~~iahG~~t~a~~~~~~~~~~~~~~~~~~~~~~~rF~ 80 (122)
T cd03448 1 PDRAPDAVVEIPTSPDQALLYRLSGDYNPLHIDPAFAKAAGFPRPILHGLCTYGFAARAVLEAFADGDPARFKAIKVRFS 80 (122)
T ss_pred CCCCCCEEEEecCCcChHHHHHHhCCCCccccCHHHHHHcCCCCceehhHHHHHHHHHHHHHHhcCCCcceeEEEEEEEc
Confidence 46778999988888888888899999999999999999999999999999999999998888876667778889999999
Q ss_pred cCCCCCCEEEEEEEEECcEEEEEEEEecCCcEEEE-EEEEE
Q 021623 264 LHVYPGETLVTEMWLQGLRVIYQVKVKERNRSALS-GFVDV 303 (310)
Q Consensus 264 ~Pv~~gd~l~~~~~~~~~~v~~~~~~~~~g~~vl~-g~a~v 303 (310)
+||++||+|++++++.++.+.++++++++|+++++ +.+++
T Consensus 81 ~PV~~gDtl~~~~~~~~~~v~~~~~~~~~g~~v~~g~~~~~ 121 (122)
T cd03448 81 SPVFPGETLRTEMWKEGNRVIFQTKVVERDVVVLSNGAALL 121 (122)
T ss_pred CCccCCCEEEEEEEEeCCEEEEEEEEccCCcEEEECCEEec
Confidence 99999999999999888888898887668888888 45543
No 4
>cd03447 FAS_MaoC FAS_MaoC, the MaoC-like hot dog fold of the fatty acid synthase, beta subunit. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and 17-beta-hydroxysteriod dehydrogenase (HSD).
Probab=99.94 E-value=2.2e-25 Score=178.09 Aligned_cols=117 Identities=24% Similarity=0.328 Sum_probs=101.7
Q ss_pred eEeeecCHHHHHHHHHHhCCCCCCCCCHHHHhhCCCCCceechHHHHHHHHHHHHHHhhcCCCceEEEEEEEECcCCCCC
Q 021623 190 AVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPG 269 (310)
Q Consensus 190 ~~~~~~~~~d~~~~~~~sgD~npiH~d~~~A~~~gf~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~Pv~~g 269 (310)
+.....++.|+..|+++|||+||||+|+++|+..||+++|+|||++++++.+++.+++..++...+.++++||++||++|
T Consensus 5 ~~~~~~t~~d~~~fa~lsGD~nPiH~D~~~A~~~g~~~~iahG~l~~~~~~~~~~~~~~~~~~~~~~~~~~rf~~PV~~g 84 (126)
T cd03447 5 ASLTITAPASNEPYARVSGDFNPIHVSRVFASYAGLPGTITHGMYTSAAVRALVETWAADNDRSRVRSFTASFVGMVLPN 84 (126)
T ss_pred ceEEEEChHHHHHHHHHhCCCCccCCCHHHHHHcCCCCCeechhHHHHHHHHHHHHhccCCCcceEEEEEEEEcccCcCC
Confidence 34567899999999999999999999999999999999999999999999988876644456667788999999999999
Q ss_pred CEEEEEEEEE---CcEEEEEEE-EecC-CcEEEEEEEEEEec
Q 021623 270 ETLVTEMWLQ---GLRVIYQVK-VKER-NRSALSGFVDVHRL 306 (310)
Q Consensus 270 d~l~~~~~~~---~~~v~~~~~-~~~~-g~~vl~g~a~v~~p 306 (310)
|+|++++++. .+.+.++++ .||+ |++|++|++++.+|
T Consensus 85 dtl~~~~~v~~~~~~~~~~~~~~~nq~~g~~V~~g~~~v~~p 126 (126)
T cd03447 85 DELEVRLEHVGMVDGRKVIKVEARNEETGELVLRGEAEVEQP 126 (126)
T ss_pred CEEEEEEEEEEEeCCeEEEEEEEEECCCCCEEEEEEEEEeCC
Confidence 9999998873 355566655 4888 99999999999987
No 5
>PF13452 MaoC_dehydrat_N: N-terminal half of MaoC dehydratase; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1S9C_K 3OML_A 3KHP_A.
Probab=99.93 E-value=4.9e-26 Score=183.53 Aligned_cols=129 Identities=27% Similarity=0.457 Sum_probs=100.6
Q ss_pred hhcCCCCCCcceEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccceeeeccccCCCCCCCCCCCCCCCC
Q 021623 11 LLLSQKLPEQKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHD 90 (310)
Q Consensus 11 ~~vG~~~~~~~~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~ 90 (310)
++||+++++ .++.|++++|++||+++| +.||+|.|+..+ +..||++++|||+|++++.+.. . . ..+.+++|
T Consensus 1 ~~iG~~~~~-~~~~v~~~~i~~ya~avg--~~~p~~~d~~~a--~~~~~~~~~apPt~~~~~~~~~--~-~-~~~~~~~~ 71 (132)
T PF13452_consen 1 AWIGREFEP-VTYTVTRRDIRRYALAVG--DPNPLYLDEEYA--RAAGHGGLIAPPTFAVVLAWPA--P-A-MFPDLGFD 71 (132)
T ss_dssp -GTT-B-E--EEEEE-HHHHHHHHHHTT---CTTHHHHCTSS----TTSTT-B--GGGHHHHHHHC--C-G-GCGCCSS-
T ss_pred CCCccEeCC-eeEEECHHHHHHHHHHhC--cCCccccCHhHh--hccCCCCcccCHHHHhhhhccc--c-e-eeecCCCC
Confidence 479999998 999999999999999999 799999988777 6668999999999999888753 1 1 23566889
Q ss_pred CceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEc---CCeEEEEEEEEEEECCCCcEEEEE
Q 021623 91 PRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDK---GKAAILEIETKSYNAESGELLCMN 149 (310)
Q Consensus 91 ~~~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k---~~G~~v~~~~~~~~~~~Ge~v~~~ 149 (310)
+.++||++|+++||+||++||+|+++++|.++++| |++.++++++++ .|++|++|+++
T Consensus 72 ~~~~vh~~~~~~~h~Pl~~Gd~l~~~~~v~~v~~k~g~G~~~~v~~~~~~-~~~~Ge~v~t~ 132 (132)
T PF13452_consen 72 LTRLVHGEQDIEFHRPLRPGDTLTATSRVTDVYDKRGAGKGVFVTVETEY-TDQDGELVATQ 132 (132)
T ss_dssp GGGEEEEEEEEEESS--BSSEEEEEEEEEEEEEEES-TTSEEEEEEEEEE-E-CTTEEEEE-
T ss_pred hhhEEecCcEEEEeCCCCCCCEEEEEEEEEEEEEecCCCCEEEEEEEEEE-ECCCCCEEEeC
Confidence 99999999999999999999999999999999999 367899999885 58999999985
No 6
>PRK13691 (3R)-hydroxyacyl-ACP dehydratase subunit HadC; Provisional
Probab=99.92 E-value=1e-24 Score=181.83 Aligned_cols=147 Identities=13% Similarity=0.093 Sum_probs=122.4
Q ss_pred CCCChhhhcCCCCCCcceEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccceeeeccccCCCCCCC-CC
Q 021623 5 SGINPELLLSQKLPEQKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGA-ID 83 (310)
Q Consensus 5 ~~~d~~~~vG~~~~~~~~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~-~~ 83 (310)
|++|.+ .||++|++...++||+++|++||.++| |.||+|.|+.++ +.+||++++|||+|+.++.... ... +.
T Consensus 1 ~~~~~~-~~g~~~~~~~~~~Vt~~~I~~FA~~~G--D~nPlH~D~eyA--~~s~fg~~IApgt~~~~~~~~~--~~~~~~ 73 (166)
T PRK13691 1 MALKTD-IRGMVWRYPDYFVVGREQIRQFARAVK--CDHPAFFSEDAA--AELGYDALVAPLTFVTIFAKYV--QLDFFR 73 (166)
T ss_pred CCCChh-hCccCcCCCCCeEECHHHHHHHHHHHC--CCCCcccCHHHH--HhCCCCCcccCHHHHHHHHHHh--cccccc
Confidence 788976 999999996788999999999999999 899999998877 7889999999999986554222 111 11
Q ss_pred CCCCCCCCceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEeccC
Q 021623 84 LPGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAG 159 (310)
Q Consensus 84 ~~~~~~~~~~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg~~ 159 (310)
...++++..+++|++|+++|++|+++||+|+++.+|.++.+++.+.+++++.++ .||+|++|++...+++.|...
T Consensus 74 ~~~~g~~~~~~v~~~q~~~f~rPV~~GDtL~~~~~V~~~~~~~~~g~V~~~~~~-~NQ~Ge~V~~~~~~~~~~~~~ 148 (166)
T PRK13691 74 HVDVGMETMQIVQVDQRFVFHKPVLAGDKLWARMDIHSVDERFGADIVVTRNVC-TNDDGELVMEAYTTLMGQQGD 148 (166)
T ss_pred ccccCCCcceeeeeeeEEEEeCCcCCCCEEEEEEEEEEEEEcCCCcEEEEEEEE-ECCCCCEEEEEEEEEEEecCC
Confidence 223456777889999999999999999999999999999876544568888885 599999999999999998643
No 7
>cd03453 SAV4209_like SAV4209_like. Similar in sequence to the Streptomyces avermitilis SAV4209 protein, with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=99.90 E-value=1.5e-22 Score=162.23 Aligned_cols=110 Identities=25% Similarity=0.305 Sum_probs=96.7
Q ss_pred eecCHHHHHHHHHHhCCCCCCCCCHHHHhhCCCCCceechHHHHHHHHHHHHHHhhcCCCceEEEEEEEECcCCCCCCEE
Q 021623 193 EDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETL 272 (310)
Q Consensus 193 ~~~~~~d~~~~~~~sgD~npiH~d~~~A~~~gf~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~Pv~~gd~l 272 (310)
...+..|+..|++++||+||||+|+++|+..||+++|+||+++++++.+++.+++ + ++..+.++++||.+||++||+|
T Consensus 10 ~~vt~~~i~~fa~~sgD~npiH~D~~~A~~~g~~~~i~~G~~~~~~~~~~~~~~~-~-~~~~i~~~~~rf~~Pv~~Gdtl 87 (127)
T cd03453 10 PPVSRADLVRYAGASGDFNPIHYDEDFAKKVGLPGVIAHGMLTMGLLGRLVTDWV-G-DPGRVVSFGVRFTKPVPVPDTL 87 (127)
T ss_pred eecCHHHHHHHHHhhcCCCccccCHHHHHHcCCCCcEecHHHHHHHHHHHHHHHc-C-CccceEEEEEEECCcCcCCCEE
Confidence 4578999999999999999999999999999999999999999999998888775 2 4566778899999999999999
Q ss_pred EEEEEEE-----C--cEEEEEEE-EecCCcEEEEEEEEEE
Q 021623 273 VTEMWLQ-----G--LRVIYQVK-VKERNRSALSGFVDVH 304 (310)
Q Consensus 273 ~~~~~~~-----~--~~v~~~~~-~~~~g~~vl~g~a~v~ 304 (310)
+++.++. + +.++++++ .||+|+.|++|+++|.
T Consensus 88 ~~~~~v~~~~~~~~~~~v~~~~~~~nq~g~~v~~g~a~v~ 127 (127)
T cd03453 88 TCTGIVVEKTVADGEDALTVTVDATDQAGGKKVLGRAIVA 127 (127)
T ss_pred EEEEEEEEEEecCCCcEEEEEEEEEEcCCCEEEEEEEEEC
Confidence 9998872 1 46777777 5999999999999873
No 8
>cd03455 SAV4209 SAV4209 is a Streptomyces avermitilis protein with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The alpha- and gamma-proteobacterial members of this CD have, in addition to a hot dog fold, an N-terminal extension.
Probab=99.90 E-value=1.5e-22 Score=161.33 Aligned_cols=109 Identities=18% Similarity=0.228 Sum_probs=96.2
Q ss_pred ecCHHHHHHHHHHhCCCCCCCCCHHHHhhCCCCCceechHHHHHHHHHHHHHHhhcCCCceEEEEEEEECcCCCCCCEEE
Q 021623 194 DYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETLV 273 (310)
Q Consensus 194 ~~~~~d~~~~~~~sgD~npiH~d~~~A~~~gf~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~Pv~~gd~l~ 273 (310)
..++.++..|+++|||+||||+|+++|++.||+++|+||+++++++.+++.+++ +.+..+.++++||.+||++||+|+
T Consensus 10 ~vt~~~i~~fa~~s~D~~piH~D~~~A~~~g~~~~ia~G~~~~~~~~~~~~~~~--~~~~~~~~~~~rf~~pv~~Gdtl~ 87 (123)
T cd03455 10 PPDPTLLFRYSAATRDFHRIHHDRDYARAVGYPDLYVNGPTLAGLVIRYVTDWA--GPDARVKSFAFRLGAPLYAGDTLR 87 (123)
T ss_pred cCCHHHHHHHHhhcCCCCcccCCHHHHHhcCCCceEEEHHHHHHHHHHHHHHcc--CCcceEEEEEEEeeccccCCCEEE
Confidence 568899999999999999999999999999999999999999999998887764 345678889999999999999999
Q ss_pred EEEEEEC---c-EEEEEEE-EecCCcEEEEEEEEEE
Q 021623 274 TEMWLQG---L-RVIYQVK-VKERNRSALSGFVDVH 304 (310)
Q Consensus 274 ~~~~~~~---~-~v~~~~~-~~~~g~~vl~g~a~v~ 304 (310)
++.++.+ + .+.++++ .||+|+.|++|++++.
T Consensus 88 ~~~~v~~~~~~~~v~~~~~~~nq~G~~v~~g~a~v~ 123 (123)
T cd03455 88 FGGRVTAKRDDEVVTVELWARNSEGDHVMAGTATVA 123 (123)
T ss_pred EEEEEEeeccCcEEEEEEEEEcCCCCEEEeEEEEEC
Confidence 9998742 2 5677777 4899999999999873
No 9
>PRK13692 (3R)-hydroxyacyl-ACP dehydratase subunit HadA; Provisional
Probab=99.89 E-value=1.2e-22 Score=168.55 Aligned_cols=146 Identities=14% Similarity=0.193 Sum_probs=122.2
Q ss_pred CCCChhhhcCCCCCCcceEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccceeeeccccCCCCCCC-CC
Q 021623 5 SGINPELLLSQKLPEQKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGA-ID 83 (310)
Q Consensus 5 ~~~d~~~~vG~~~~~~~~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~-~~ 83 (310)
|++|.+ .+|.++.....+++|+++|+.||.++| |+||+|.|+.++ +.++|++.+|||+|+.++++.. ... ..
T Consensus 1 ~~~~~~-~vG~~~~~~~~~tvt~~dI~~FA~~~G--D~nPlh~D~e~A--~~~~fg~~iA~~~~~~~~gl~~--~~~~~~ 73 (159)
T PRK13692 1 MALSAD-IVGMHYRYPDHYEVEREKIREYAVAVQ--NDDAAYFEEDAA--AELGYKGLLAPLTFICVFGYKA--QSAFFK 73 (159)
T ss_pred CCCChh-HceeEcCCCCceEeCHHHHHHHHHHHC--CCCCCccCHHHH--HhcCCCCcccChHHHHHhhhhh--hhhhhh
Confidence 678865 999999972268999999999999999 899999988766 6779999999999987666543 111 22
Q ss_pred CCCCCCCCceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEecc
Q 021623 84 LPGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGA 158 (310)
Q Consensus 84 ~~~~~~~~~~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg~ 158 (310)
.++++++..+.+|++|+++|++|+++||+|+++.+|.++++++...+++++.+++ ||+|++|++.+.+++.|+.
T Consensus 74 ~~~l~~~~~~~~~~~q~~~f~~PV~~GDtL~~~~eV~~~~~~~~~giv~~~~~v~-Nq~Ge~V~~~~~~~~~r~~ 147 (159)
T PRK13692 74 HANIAVADAQIVQVDQVLKFEKPIVAGDKLYCDVYVDSVREAHGTQIIVTKNIVT-NEEGDVVQETYTTLAGRAG 147 (159)
T ss_pred cccCCCCccceEeeeeEEEEeCCccCCCEEEEEEEEEEEEEcCCceEEEEEEEEE-cCCCCEEEEEEEEEEEecC
Confidence 3556777788999999999999999999999999999987665335688888864 9999999999999999965
No 10
>COG3777 Uncharacterized conserved protein [Function unknown]
Probab=99.88 E-value=2.1e-22 Score=171.19 Aligned_cols=258 Identities=18% Similarity=0.113 Sum_probs=185.1
Q ss_pred hhhhcCCCCCCcceEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccceeeeccccCCCCCCC--CCCCC
Q 021623 9 PELLLSQKLPEQKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGA--IDLPG 86 (310)
Q Consensus 9 ~~~~vG~~~~~~~~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~--~~~~~ 86 (310)
+++|||+.-.. +..++..++..+|...+ +.-|. .+.-.|++. +..+|.-..-++.++ +.. .-+|
T Consensus 6 ~k~wIgR~~~~--~~~~t~s~~~r~~a~~~--~~~~t---~l~p~~H~l----ff~~p~~~~~lg~dg--hp~rg~flp- 71 (273)
T COG3777 6 LKDWIGRDELT--HHRLTASDVLRCAALFV--SEAPT---HLQPGWHFL----FFPPPVEKADLGPDG--HPARGSFLP- 71 (273)
T ss_pred hhhhhccccch--hhhccccccceehhhcC--CCccc---ccCcceeee----ecCCchhhhcCCCCC--CcCccCCCC-
Confidence 56799999885 88999999999999888 33332 244445553 222332223455555 443 1223
Q ss_pred CCCCCceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcC--Ce--EEEEEEEEEEECCCCcEEEEEEEEEEEeccCCCC
Q 021623 87 LQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKG--KA--AILEIETKSYNAESGELLCMNRMTAFLRGAGGFS 162 (310)
Q Consensus 87 ~~~~~~~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~--~G--~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg~~~~~ 162 (310)
|++..+.|+++.+++||+||+.|++.++..+|..+++|. +| .++++... + .++|+++++++.+++|++...
T Consensus 72 -p~~~~RRmWa~G~l~f~~pl~lgqe~t~~e~Iq~i~ek~g~~g~ltfvT~~h~-~-~~~~~l~l~Err~ivY~n~~~-- 146 (273)
T COG3777 72 -PLRYRRRMWAGGELVFHLPLRLGQEYTCHETIQYIEEKHGRSGELTFVTVPHV-Y-SSPGQLCLFERRTIVYTNAPA-- 146 (273)
T ss_pred -CcchhhhhhccceEEEecceecCceeehhHHHHHHHHhcccccceeEEeccce-e-ccCcceeeeeeeeEEEecCCC--
Confidence 788999999999999999999999999999999999884 45 67777655 4 479999999999999998641
Q ss_pred CCCCCCCCCcCCCCCcccCCCCCCCCceEeeecCHHHHHHHHHHhCCCCCCCCCHHHHhh-CCCCCceechHHHHHHHHH
Q 021623 163 NSSQPFSYSKYQTIPVSVVKIPKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKA-AGFSRPILHGLCTMGFAVR 241 (310)
Q Consensus 163 ~~~~p~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~d~~~~~~~sgD~npiH~d~~~A~~-~gf~~~i~hG~~~~~~~~~ 241 (310)
.+|+. ..+...|...- ...-..++.++.+|.+++.|.|.||+|..||+. .||+++|+||.+...++.+
T Consensus 147 --s~p~~--------~~s~~~p~~~w-~~~~tptpvllfrYsaltfN~HrIHyD~~Yat~vEgYpgLVvhGPl~atlll~ 215 (273)
T COG3777 147 --SKPAV--------KMSVAEPNGKW-LKNFTPTPVLLFRYSALTFNGHRIHYDAPYATYVEGYPGLVVHGPLIATLLLR 215 (273)
T ss_pred --CCccc--------cCCCCCCCCch-hhcCCCCchheeehhhhccCceeeeccCcceeeccCCCCceecchHHHHHHHH
Confidence 11210 00111221100 001123455667889999999999999999987 8999999999999988887
Q ss_pred HHHHHhhcCCCceEEEEEEEECcCCCCCCEEEEEEEEEC-cEEEEEEEEecCCcEEEEEEE
Q 021623 242 AIIKFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWLQG-LRVIYQVKVKERNRSALSGFV 301 (310)
Q Consensus 242 ~~~~~~~~g~~~~~~~~~~rf~~Pv~~gd~l~~~~~~~~-~~v~~~~~~~~~g~~vl~g~a 301 (310)
++... . +..++++++|-.+|.|+++++++.....+ +.+...+ .+.+|.+.+.|.+
T Consensus 216 ~~~~~-~---pq~~~Rf~fR~L~p~f~~~~lti~~~l~~~g~~~~w~-~~~~~pv~mrarV 271 (273)
T COG3777 216 AFQPF-L---PQPIRRFRFRNLSPAFPNETLTICGSLSGSGGAELWT-IRGDGPVAMRARV 271 (273)
T ss_pred Hhhhh-c---cccchheeccccccccCCCCeeEeeEecCCCceEEEE-ecCCcchhheeee
Confidence 76533 2 33488999999999999999999988765 3354433 3556666677765
No 11
>COG2030 MaoC Acyl dehydratase [Lipid metabolism]
Probab=99.87 E-value=2.4e-21 Score=160.97 Aligned_cols=125 Identities=26% Similarity=0.378 Sum_probs=102.7
Q ss_pred CCCCCCCceEeeecCHHHHHHHHHHhCCCCCCCCCHHHHhh-CCCCCceechHHHHHHHHHHHHHHhhcC-CCceEEEEE
Q 021623 182 KIPKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKA-AGFSRPILHGLCTMGFAVRAIIKFICRG-DPNMVKNIF 259 (310)
Q Consensus 182 ~~p~~~p~~~~~~~~~~d~~~~~~~sgD~npiH~d~~~A~~-~gf~~~i~hG~~~~~~~~~~~~~~~~~g-~~~~~~~~~ 259 (310)
.++...+...+...++.|+..|++++||+||||+|+++|++ .+|+++|+|||+|++++.+++..+...+ ...++...+
T Consensus 21 ~vG~~~~~~~~~~~t~~d~~~fa~~tgD~qpiH~D~e~A~~~~~fg~~iahG~~t~a~~~~~~~~~~~~~~~~~~~g~~~ 100 (159)
T COG2030 21 EVGQVFPHSPWRTVTEADIVLFAAVTGDPNPIHLDPEAAKKTSGFGGPIAHGMLTLALAMGLVVAALGDPSVGANLGGDE 100 (159)
T ss_pred cCCcEEecCCceEecHHHHHHHHHhcCCCCceecCHHHHhccCCCCCEehhHHHHHHHHHHHHHHhccCcceeeeccccc
Confidence 34433344455678999999999999999999999999999 6999999999999999999888765322 135777889
Q ss_pred EEECcCCCCCCEEEEEEEEEC-------cEEEEEEE-EecCCcEEEEEEEEEEec
Q 021623 260 SRFLLHVYPGETLVTEMWLQG-------LRVIYQVK-VKERNRSALSGFVDVHRL 306 (310)
Q Consensus 260 ~rf~~Pv~~gd~l~~~~~~~~-------~~v~~~~~-~~~~g~~vl~g~a~v~~p 306 (310)
+||.+||++||+|+++.++.+ |.+.++.. .|++|+.++...++...+
T Consensus 101 vRF~~PV~~Gdtl~~~~~v~~~~~~~~~G~v~~~~~~~~~~g~~v~~~~~~~~~~ 155 (159)
T COG2030 101 VRFVKPVFPGDTLRARVEVLDKRPSKSRGLVTLRLETVNQEGELVLTLEATVLVL 155 (159)
T ss_pred eEecCCCCCCCEEEEEEEEEEeeecCCceEEEEEEEEEccCCcEEEEEEEeEeEe
Confidence 999999999999999998842 67777776 699999999988776543
No 12
>cd03452 MaoC_C MaoC_C The C-terminal hot dog fold of the MaoC (monoamine oxidase C) dehydratase regulatory protein. Orthologs of MaoC include PaaZ [Escherichia coli] and PaaN [Pseudomonas putida], which are putative ring-opening enzymes involved in phenylacetic acid degradation. The C-terminal domain of MaoC has sequence similarity to (R)-specific enoyl-CoA hydratase,Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. MaoC also has an N-terminal PutA domain like that found in the E. coli PutA proline dehydrogenase and other members of the aldehyde dehydrogenase family.
Probab=99.86 E-value=3.8e-21 Score=157.01 Aligned_cols=110 Identities=21% Similarity=0.190 Sum_probs=91.9
Q ss_pred ecCHHHHHHHHHHhCCCCCCCCCHHHHhhCCCCCceechHHHHHHHHHHHHHHhhcCCCceE---EEEEEEECcCCCCCC
Q 021623 194 DYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMV---KNIFSRFLLHVYPGE 270 (310)
Q Consensus 194 ~~~~~d~~~~~~~sgD~npiH~d~~~A~~~gf~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~---~~~~~rf~~Pv~~gd 270 (310)
..+..++..|++++||+||||+|++||+..+|+++|+||+++++++.+++..+. +...+ ...+++|++||++||
T Consensus 17 tvt~~~i~~Fa~~tgD~nPiH~D~e~A~~~~fg~~ia~G~l~~s~~~~l~~~~~---~~~~~~~~g~~~~rf~~PV~~GD 93 (142)
T cd03452 17 TVTEADIVNFACLTGDHFYAHMDEIAAKASFFGKRVAHGYFVLSAAAGLFVDPA---PGPVLANYGLENLRFLEPVYPGD 93 (142)
T ss_pred EEcHHHHHHHHHhhCCCCccccCHHHHhhCCCCCeeecHHHHHHHHhhhCccCC---cccEEEEeccceEEECCCCCCCC
Confidence 578999999999999999999999999999999999999999999988765432 22332 345999999999999
Q ss_pred EEEEEEEEE-----C----cEEEEEEE-EecCCcEEEEEEEEEEec
Q 021623 271 TLVTEMWLQ-----G----LRVIYQVK-VKERNRSALSGFVDVHRL 306 (310)
Q Consensus 271 ~l~~~~~~~-----~----~~v~~~~~-~~~~g~~vl~g~a~v~~p 306 (310)
+|+++.++. . +.+.++++ .||+|++|++|+..+.-+
T Consensus 94 tl~~~~~V~~~~~~~~~~~~~v~~~~~~~nq~g~~V~~~~~~~~~~ 139 (142)
T cd03452 94 TIQVRLTCKRKIPRDGQDYGVVRWDAEVTNQNGELVASYDILTLVA 139 (142)
T ss_pred EEEEEEEEEEEeecCCCCcEEEEEEEEEEecCCCEEEEEEehHeeE
Confidence 999998862 1 36777777 499999999999877644
No 13
>cd03449 R_hydratase (R)-hydratase [(R)-specific enoyl-CoA hydratase] catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. (R)-hydratase contains a hot-dog fold similar to those of thioesterase II, and beta-hydroxydecanoyl-ACP dehydratase, MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit. The active site lies within a substrate-binding tunnel formed by the (R)-hydratase homodimer. A subset of the bacterial (R)-hydratases contain a C-terminal phosphotransacetylase (PTA) domain.
Probab=99.85 E-value=2.3e-20 Score=149.18 Aligned_cols=110 Identities=25% Similarity=0.350 Sum_probs=95.4
Q ss_pred ecCHHHHHHHHHHhCCCCCCCCCHHHHhhCCCCCceechHHHHHHHHHHHHHHhhcCCCceEEEEEEEECcCCCCCCEEE
Q 021623 194 DYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETLV 273 (310)
Q Consensus 194 ~~~~~d~~~~~~~sgD~npiH~d~~~A~~~gf~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~Pv~~gd~l~ 273 (310)
..++.++..|++++||+||||+|+++|+..||+++|+||+++++++.+++..+ .+++.....+.+++|.+||++||+|+
T Consensus 12 tv~~~~~~~fa~~~gd~npiH~D~~~A~~~g~~~~i~~g~~~~~~~~~~~~~~-~~g~~~~~~~~~~~f~~Pv~~gd~l~ 90 (128)
T cd03449 12 TITEEDVELFAELSGDFNPIHLDEEYAKKTRFGGRIAHGMLTASLISAVLGTL-LPGPGTIYLSQSLRFLRPVFIGDTVT 90 (128)
T ss_pred EEcHHHHHHHHHHhCCCCCccCCHHHHhhCCCCCceecHHHHHHHHHHHHhcc-CCCceEEEEEEEEEECCCccCCCEEE
Confidence 67899999999999999999999999999999999999999999988777654 34555566778999999999999999
Q ss_pred EEEEEE---C--cEEEEEEE-EecCCcEEEEEEEEEE
Q 021623 274 TEMWLQ---G--LRVIYQVK-VKERNRSALSGFVDVH 304 (310)
Q Consensus 274 ~~~~~~---~--~~v~~~~~-~~~~g~~vl~g~a~v~ 304 (310)
++.++. + +.+.++++ .|++|+++++|++++.
T Consensus 91 ~~~~v~~~~~~~~~v~~~~~~~~~~g~~v~~g~~~~~ 127 (128)
T cd03449 91 ATVTVTEKREDKKRVTLETVCTNQNGEVVIEGEAVVL 127 (128)
T ss_pred EEEEEEEEecCCCEEEEEEEEEeCCCCEEEEEEEEEe
Confidence 998873 3 56777777 4888999999999875
No 14
>PRK13693 (3R)-hydroxyacyl-ACP dehydratase subunit HadB; Provisional
Probab=99.85 E-value=4.4e-20 Score=150.47 Aligned_cols=110 Identities=25% Similarity=0.329 Sum_probs=88.5
Q ss_pred ecCHHHHHHHHHHhCCCCCCCCCHHHHhhCCCCCceechHHHHHHHHHHHHHHhhcCCCceEEEEEEEECcCCCCC-C--
Q 021623 194 DYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPG-E-- 270 (310)
Q Consensus 194 ~~~~~d~~~~~~~sgD~npiH~d~~~A~~~gf~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~Pv~~g-d-- 270 (310)
..++.|+.+|+++|||+||||+|+++|+..||+++|+|||++++++.+++.++. +.+..+.++++||.+||++| |
T Consensus 21 tvt~~di~~FA~~sgD~nPiH~D~~~A~~~g~~~~iahG~~~~a~~~~~~~~~~--~~~~~~~~~~~rF~~pv~~g~D~~ 98 (142)
T PRK13693 21 PLTRQDLVNYAGVSGDLNPIHWDDEIAKVVGLDTAIAHGMLTMGLGGGYVTSWV--GDPGAVTEYNVRFTAVVPVPNDGK 98 (142)
T ss_pred eeCHHHHHHHHHHhCCCCccccCHHHHHhcCCCCcEecHHHHHHHHHHHHHHhc--CCCcceEEEEEEecccEECCCCcc
Confidence 578999999999999999999999999999999999999999999999887764 34555678899999999964 4
Q ss_pred --EEEEEEEEE-----CcEEEEEEEEecC-CcEEEEEEEEEEe
Q 021623 271 --TLVTEMWLQ-----GLRVIYQVKVKER-NRSALSGFVDVHR 305 (310)
Q Consensus 271 --~l~~~~~~~-----~~~v~~~~~~~~~-g~~vl~g~a~v~~ 305 (310)
+++++.++. .+.+++++++.++ ++.+..|.+.+.+
T Consensus 99 ~~~l~~~~~V~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 141 (142)
T PRK13693 99 GAELVFNGRVKSVDPESKSVTIALTATTGGKKIFGRAIASAKL 141 (142)
T ss_pred ceEEEEEEEEEEeccCCcEEEEEEEEEECCcEEEEEEEEEEEc
Confidence 888877763 2467787775444 4444456666654
No 15
>cd03441 R_hydratase_like (R)-hydratase [(R)-specific enoyl-CoA hydratase]. Catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. The structure of the monomer includes a five-strand antiparallel beta-sheet wrapped around a central alpha helix, referred to as a hot dog fold. The active site lies within a substrate-binding tunnel formed by the homodimer. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit.
Probab=99.85 E-value=3.6e-20 Score=147.61 Aligned_cols=112 Identities=36% Similarity=0.480 Sum_probs=96.6
Q ss_pred eeecCHHHHHHHHHHhCCCCCCCCCHHHHhhCCCCCceechHHHHHHHHHHHHHHhhcCCCceEEEEEEEECcCCCCCCE
Q 021623 192 FEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGET 271 (310)
Q Consensus 192 ~~~~~~~d~~~~~~~sgD~npiH~d~~~A~~~gf~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~Pv~~gd~ 271 (310)
....++.++..|++++||+||||+|+++|+..||+++|+||+++++++.+++.+++..++...+..++++|.+||++||+
T Consensus 7 ~~~~~~~~~~~fa~~~gd~npiH~d~~~A~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~Pv~~Gd~ 86 (127)
T cd03441 7 GRTVTEADIALFARLSGDPNPIHVDPEYAKAAGFGGRIAHGMLTLSLASGLLVQWLPGTDGANLGSQSVRFLAPVFPGDT 86 (127)
T ss_pred ceEcCHHHHHHHHHHhCCCCccccCHHHHHhCCCCCceechHHHHHHHHhhhhhhccCcccceeEEeEEEEeCCcCCCCE
Confidence 34568899999999999999999999999999999999999999999998887765222566778899999999999999
Q ss_pred EEEEEEEEC-------cEEEEEEE-EecCCcEEEEEEEEE
Q 021623 272 LVTEMWLQG-------LRVIYQVK-VKERNRSALSGFVDV 303 (310)
Q Consensus 272 l~~~~~~~~-------~~v~~~~~-~~~~g~~vl~g~a~v 303 (310)
|+++.++.+ +.+.++++ .|++|+++++|++.+
T Consensus 87 l~~~~~v~~~~~~~~~~~v~~~~~~~n~~g~~v~~g~~~~ 126 (127)
T cd03441 87 LRVEVEVLGKRPSKGRGVVTVRTEARNQGGEVVLSGEATV 126 (127)
T ss_pred EEEEEEEEEeeccCCCcEEEEEEEEEeCCCCEEEEEEEEe
Confidence 999998731 46777776 588999999999876
No 16
>cd03451 FkbR2 FkbR2 is a Streptomyces hygroscopicus protein with a hot dog fold that belongs to a conserved family of proteins found in prokaryotes and archaea but not in eukaryotes. FkbR2 has sequence similarity to (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The function of FkbR2 is unknown.
Probab=99.84 E-value=2e-20 Score=153.28 Aligned_cols=116 Identities=20% Similarity=0.141 Sum_probs=94.8
Q ss_pred eecCHHHHHHHHHHhCCCCCCCCCHHHHhhCCCCCceechHHHHHHHHHHHHHHhhcCCCceEEEEEEEECcCCCCCCEE
Q 021623 193 EDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETL 272 (310)
Q Consensus 193 ~~~~~~d~~~~~~~sgD~npiH~d~~~A~~~gf~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~Pv~~gd~l 272 (310)
...+..++..|++++||+||||+|+++|+..+|+++|+||+++++++.+++..+........+...+++|++||++||+|
T Consensus 19 ~tvt~~~i~~fa~~~gd~~piH~D~~~a~~~~~~~~ia~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~pv~~GDtl 98 (146)
T cd03451 19 RTVTEADNVLFTLLTMNTAPLHFDAAYAAKTEFGRRLVNSLFTLSLALGLSVNDTSLTAVANLGYDEVRFPAPVFHGDTL 98 (146)
T ss_pred eEEcHHHHHHHHHhhCCCCccccCHHHHhhCCCCCccccHHhHHHHHhhheehhccccceeccCccEEEecCCCCCCCEE
Confidence 35789999999999999999999999999999999999999999998766555431112223344589999999999999
Q ss_pred EEEEEEE----C------cEEEEEEEE-ecCCcEEEEEEEEEEeccC
Q 021623 273 VTEMWLQ----G------LRVIYQVKV-KERNRSALSGFVDVHRLAS 308 (310)
Q Consensus 273 ~~~~~~~----~------~~v~~~~~~-~~~g~~vl~g~a~v~~p~~ 308 (310)
+++.++. . +.+.+++++ ||+|++|++|++++..|..
T Consensus 99 ~~~~~v~~~~~~~~~~~~~~v~~~~~~~nq~g~~V~~~~~~~~~~~~ 145 (146)
T cd03451 99 YAESEVLSKRESKSRPDAGIVTVRTVGYNQDGEPVLSFERTALVPKR 145 (146)
T ss_pred EEEEEEEEEecCCCCCCCeEEEEEEEEECCCCCEEEEEEehhEEEcC
Confidence 9988762 1 367788774 8999999999999987753
No 17
>PF01575 MaoC_dehydratas: MaoC like domain; InterPro: IPR002539 The C terminus of the MaoC protein is found to share similarity with a wide variety of enzymes. All these enzymes contain multiple domains. This domain is found in parts of two enzymes that have been assigned dehydratase activities. A deletion mutant of the C-terminal 271 amino acids in Q02207 from SWISSPROT abolished its 2-enoyl-CoA hydratase activity, suggesting that this region may be a hydratase enzyme []. The maoC gene is part of a operon with maoA which is involved in the synthesis of monoamine oxidase [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1PN4_C 1PN2_B 1S9C_K 3OML_A 1Q6W_B 2B3M_A 3K67_B ....
Probab=99.83 E-value=1e-20 Score=150.42 Aligned_cols=89 Identities=33% Similarity=0.557 Sum_probs=73.3
Q ss_pred eeecCHHHHHHHHHHhCCCCCCCCCHHHHhhCCCCCceechHHHHHHHHHHHHHHhhcCCCceEEEEEEEECcCCCCCCE
Q 021623 192 FEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGET 271 (310)
Q Consensus 192 ~~~~~~~d~~~~~~~sgD~npiH~d~~~A~~~gf~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~Pv~~gd~ 271 (310)
....++.++.+|+++|||+||||+|+++|+..||+++|+|||++++++.+++.+++.+.....+..+++||.+||++||+
T Consensus 15 ~~tit~~~~~~fa~~sgD~nPiH~D~~~A~~~gf~~~ivhG~~~~a~~~~~~~~~~~~~~~~~~~~~~~rF~~PV~~gdt 94 (122)
T PF01575_consen 15 SRTITEADIRQFAALSGDFNPIHVDPEYARATGFGGPIVHGMLTLALASGLLGDWLGPNPPARLGRFNVRFRAPVFPGDT 94 (122)
T ss_dssp EEEEEHHHHHHHHHHHT---HHHH-HHHHHTSTTSSSB-BHHHHHHHHHHHHHHHHSTTECEEEEEEEEEESS--BTTEE
T ss_pred CEEECHHHHHHHHHhhCCCCcceecHHHHhhcCCCCEEEccHHHHHHHHHHHHHhccCccceEEEEEEEEEeccccCCCE
Confidence 34678999999999999999999999999999999999999999999999998886433467889999999999999999
Q ss_pred EEEEEEEEC
Q 021623 272 LVTEMWLQG 280 (310)
Q Consensus 272 l~~~~~~~~ 280 (310)
|++++++.+
T Consensus 95 l~~~~~v~~ 103 (122)
T PF01575_consen 95 LTAEVEVTE 103 (122)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 999998743
No 18
>cd03446 MaoC_like MoaC_like Similar to the MaoC (monoamine oxidase C) dehydratase regulatory protein but without the N-terminal PutA domain. This protein family has a hot-dog fold similar to that of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=99.82 E-value=1.7e-19 Score=146.67 Aligned_cols=109 Identities=28% Similarity=0.351 Sum_probs=89.9
Q ss_pred ecCHHHHHHHHHHhCCCCCCCCCHHHHhhCCCCCceechHHHHHHHHHHHHHHhhcCCCc----eEEEEEEEECcCCCCC
Q 021623 194 DYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPN----MVKNIFSRFLLHVYPG 269 (310)
Q Consensus 194 ~~~~~d~~~~~~~sgD~npiH~d~~~A~~~gf~~~i~hG~~~~~~~~~~~~~~~~~g~~~----~~~~~~~rf~~Pv~~g 269 (310)
..++.++..|++++||+||||+|+++|+..||+++|+||+++++++.+++... .+... .+...+++|.+||++|
T Consensus 17 tvt~~~i~~fa~~~gD~np~H~D~~~A~~~~~~~~ia~G~~~~a~~~~~~~~~--~~~~~~~~~~~g~~~~~f~~pv~~G 94 (140)
T cd03446 17 TVTEADVVMFAGLSGDWNPIHTDAEYAKKTRFGERIAHGLLTLSIATGLLQRL--GVFERTVVAFYGIDNLRFLNPVFIG 94 (140)
T ss_pred EECHHHHHHHHHhhCCCcccccCHHHHccCCCCCceeccccHHHHHhhHhhhc--ccccceeeEEeccceEEEcCCCCCC
Confidence 56899999999999999999999999999999999999999999988776543 22211 2223489999999999
Q ss_pred CEEEEEEEEE---------CcEEEEEEE-EecCCcEEEEEEEEEE
Q 021623 270 ETLVTEMWLQ---------GLRVIYQVK-VKERNRSALSGFVDVH 304 (310)
Q Consensus 270 d~l~~~~~~~---------~~~v~~~~~-~~~~g~~vl~g~a~v~ 304 (310)
|+|+++.++. .+.++++++ .||+|++|++|++++.
T Consensus 95 D~l~~~~~v~~~~~~~~~~~~~v~~~~~~~nq~g~~v~~~~~~~l 139 (140)
T cd03446 95 DTIRAEAEVVEKEEKDGEDAGVVTRRIEVVNQRGEVVQSGEMSLL 139 (140)
T ss_pred CEEEEEEEEEEecccCCCCceEEEEEEEEEcCCCCEEEEEEEeee
Confidence 9999998862 136777777 5899999999998874
No 19
>PRK08190 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated
Probab=99.81 E-value=4.5e-19 Score=171.00 Aligned_cols=116 Identities=21% Similarity=0.264 Sum_probs=101.4
Q ss_pred eecCHHHHHHHHHHhCCCCCCCCCHHHHhhCCCCCceechHHHHHHHHHHHHHHhhcCCCceEEEEEEEECcCCCCCCEE
Q 021623 193 EDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETL 272 (310)
Q Consensus 193 ~~~~~~d~~~~~~~sgD~npiH~d~~~A~~~gf~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~Pv~~gd~l 272 (310)
...|+.++..|++++||+||||+|++||+..||+++|+||+++++++.+++..+ +++.+..+..++++|.+||++||+|
T Consensus 24 rtvT~~di~~FA~lsGD~nPiH~D~e~Ak~sgfg~~IahG~l~~s~~~~l~~~~-~~g~~~~~~~~~~rF~~PV~~GDtl 102 (466)
T PRK08190 24 RTLTPDDIELFAAMSGDVNPAHLDAAYAASDGFHHVVAHGMWGGALISAVLGTR-LPGPGTIYLGQSLRFRRPVRIGDTL 102 (466)
T ss_pred EEecHHHHHHHHHHhCCCCCCCcCHHHHHhCCCCCceeCHHHHHHHHHHHHhhh-CCCcceEEEEEEEEEeCCcCCCCEE
Confidence 467899999999999999999999999999999999999999999988776655 4566666778999999999999999
Q ss_pred EEEEEEE-----CcEEEEEEE-EecCCcEEEEEEEEEEeccCC
Q 021623 273 VTEMWLQ-----GLRVIYQVK-VKERNRSALSGFVDVHRLASS 309 (310)
Q Consensus 273 ~~~~~~~-----~~~v~~~~~-~~~~g~~vl~g~a~v~~p~~~ 309 (310)
+++.++. .+.+.++++ .||+|+.|++|++++..|++.
T Consensus 103 ~~~~~V~~~~~~~~~v~~~~~~~nq~G~~V~~g~~~~l~~~~~ 145 (466)
T PRK08190 103 TVTVTVREKDPEKRIVVLDCRCTNQDGEVVITGTAEVIAPTEK 145 (466)
T ss_pred EEEEEEEEEECCCCEEEEEEEEEeCCCCEEEEEEEEeeccccc
Confidence 9998873 246778877 599999999999999987654
No 20
>cd03454 YdeM YdeM is a Bacillus subtilis protein that belongs to a family of prokaryotic proteins of unkown function. YdeM has sequence similarity to the hot-dog fold of (R)-specific enoyl-CoA hydratase. Other enzymes with this fold include the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=99.79 E-value=1.1e-18 Score=141.90 Aligned_cols=110 Identities=22% Similarity=0.156 Sum_probs=89.1
Q ss_pred ecCHHHHHHHHHHhCCCCCCCCCHHHHhhCCCCCceechHHHHHHHHHHHHHHhhcCC-C-ceEEEEEEEECcCCCCCCE
Q 021623 194 DYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGD-P-NMVKNIFSRFLLHVYPGET 271 (310)
Q Consensus 194 ~~~~~d~~~~~~~sgD~npiH~d~~~A~~~gf~~~i~hG~~~~~~~~~~~~~~~~~g~-~-~~~~~~~~rf~~Pv~~gd~ 271 (310)
..++.++..|+.+ +|+||||+|+++|+..||+++|+||+++++++.+++.+...... . ......+++|.+||++||+
T Consensus 16 ~vt~~~v~~Fa~~-~D~npih~D~e~A~~~~~~~~ia~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~pv~~Gd~ 94 (140)
T cd03454 16 TVTEEEIIAFARE-FDPQPFHLDEEAAKESLFGGLAASGWHTAAITMRLLVDAGLSGSASGGSPGIDELRWPRPVRPGDT 94 (140)
T ss_pred EEcHHHHHHHHHc-cCCCccCcCHHHHhcCCCCCeeechHHHHHHHHHhhhhhccccceEEEEcceeeeEeCCCCCCCCE
Confidence 4688999999997 99999999999999999999999999999999877654332221 1 2223358999999999999
Q ss_pred EEEEEEEE---------C-cEEEEEEE-EecCCcEEEEEEEEEE
Q 021623 272 LVTEMWLQ---------G-LRVIYQVK-VKERNRSALSGFVDVH 304 (310)
Q Consensus 272 l~~~~~~~---------~-~~v~~~~~-~~~~g~~vl~g~a~v~ 304 (310)
|+++.++. + +.+.++++ .||+|++|++|++++.
T Consensus 95 l~~~~~v~~~~~~~~~~~~~~v~~~~~~~nq~g~~v~~~~~~~~ 138 (140)
T cd03454 95 LSVEVEVLDKRPSRSRPDRGIVTLRSETLNQRGEVVLTFEATVL 138 (140)
T ss_pred EEEEEEEEEEeecCCCCCCeEEEEEEEEEcCCCCEEEEEEehhe
Confidence 99998862 1 36677776 4899999999998764
No 21
>cd03450 NodN NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.
Probab=99.78 E-value=4.5e-18 Score=139.55 Aligned_cols=110 Identities=20% Similarity=0.129 Sum_probs=85.8
Q ss_pred eecCHHHHHHHHHHhCCCCCCCCCHHHHhhCCCCCceechHHHHHHHHHHHHHHhhcCCC---ceEEEEEEEECcCCCCC
Q 021623 193 EDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDP---NMVKNIFSRFLLHVYPG 269 (310)
Q Consensus 193 ~~~~~~d~~~~~~~sgD~npiH~d~~~A~~~gf~~~i~hG~~~~~~~~~~~~~~~~~g~~---~~~~~~~~rf~~Pv~~g 269 (310)
...++.++..|++++||+||||+|+++|++.||+++|+||+++++++.+++.++...... ..+...++||.+||++|
T Consensus 22 ~~vt~~di~~FA~~sgD~nPiH~D~e~A~~~gfg~~Ia~G~~t~sl~~~l~~~~~~~~~~~~~~~~g~~~~rF~~PV~~G 101 (149)
T cd03450 22 VTVDQERIDQFADATGDHQWIHVDPERAAAEPFGGTIAHGFLTLSLLPALTPQLFRVEGVKMGVNYGLDKVRFPAPVPVG 101 (149)
T ss_pred EEECHHHHHHHHHhhCCCCccccCHHHHhhCCCCCeEECHHHHHHHHHHHHHhcccCCCceEEEEeeccEEEeCcceeCC
Confidence 356899999999999999999999999999999999999999999999888776421111 23344689999999999
Q ss_pred CEEEEEEEEE------Cc--EEEEEEE--EecCCcEEEEEEEE
Q 021623 270 ETLVTEMWLQ------GL--RVIYQVK--VKERNRSALSGFVD 302 (310)
Q Consensus 270 d~l~~~~~~~------~~--~v~~~~~--~~~~g~~vl~g~a~ 302 (310)
|+|+++.++. ++ .++.++. +...+++++..+..
T Consensus 102 Dtl~~~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 144 (149)
T cd03450 102 SRVRGRFTLLSVEELKGGGVQVTLEVTVEIEGEDKPACVAEWI 144 (149)
T ss_pred cEEEEEEEEEEEEEcCCCeEEEEEEEEEEEeCCCCceEEEEEE
Confidence 9999998872 23 4444444 34456777776543
No 22
>PRK13691 (3R)-hydroxyacyl-ACP dehydratase subunit HadC; Provisional
Probab=99.77 E-value=1.2e-17 Score=139.31 Aligned_cols=112 Identities=10% Similarity=0.004 Sum_probs=85.4
Q ss_pred ecCHHHHHHHHHHhCCCCCCCCCHHHHhhCCCCCceechHHHHHHHHHHHHHHhh----cCCCc---eEEEEEEEECcCC
Q 021623 194 DYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFIC----RGDPN---MVKNIFSRFLLHV 266 (310)
Q Consensus 194 ~~~~~d~~~~~~~sgD~npiH~d~~~A~~~gf~~~i~hG~~~~~~~~~~~~~~~~----~g~~~---~~~~~~~rf~~Pv 266 (310)
..++.++..|++++||+||+|+|++||+..||+++|+||++. +++...+...+. .|-+. ....++++|.+||
T Consensus 19 ~Vt~~~I~~FA~~~GD~nPlH~D~eyA~~s~fg~~IApgt~~-~~~~~~~~~~~~~~~~~g~~~~~~v~~~q~~~f~rPV 97 (166)
T PRK13691 19 VVGREQIRQFARAVKCDHPAFFSEDAAAELGYDALVAPLTFV-TIFAKYVQLDFFRHVDVGMETMQIVQVDQRFVFHKPV 97 (166)
T ss_pred EECHHHHHHHHHHHCCCCCcccCHHHHHhCCCCCcccCHHHH-HHHHHHhccccccccccCCCcceeeeeeeEEEEeCCc
Confidence 457899999999999999999999999999999999999876 333223222211 11111 1235689999999
Q ss_pred CCCCEEEEEEEEE----C---cEEEEEEE-EecCCcEEEEEEEEEEec
Q 021623 267 YPGETLVTEMWLQ----G---LRVIYQVK-VKERNRSALSGFVDVHRL 306 (310)
Q Consensus 267 ~~gd~l~~~~~~~----~---~~v~~~~~-~~~~g~~vl~g~a~v~~p 306 (310)
++||+|+++.++. . +.+.+++. .||+|++|++++.++...
T Consensus 98 ~~GDtL~~~~~V~~~~~~~~~g~V~~~~~~~NQ~Ge~V~~~~~~~~~~ 145 (166)
T PRK13691 98 LAGDKLWARMDIHSVDERFGADIVVTRNVCTNDDGELVMEAYTTLMGQ 145 (166)
T ss_pred CCCCEEEEEEEEEEEEEcCCCcEEEEEEEEECCCCCEEEEEEEEEEEe
Confidence 9999999998762 1 46777777 599999999998877643
No 23
>PRK13692 (3R)-hydroxyacyl-ACP dehydratase subunit HadA; Provisional
Probab=99.74 E-value=4.9e-17 Score=134.84 Aligned_cols=112 Identities=8% Similarity=0.060 Sum_probs=84.9
Q ss_pred ecCHHHHHHHHHHhCCCCCCCCCHHHHhhCCCCCceechHHHHHHHHHHHHHHhh----c--CCCceEEEEEEEECcCCC
Q 021623 194 DYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFIC----R--GDPNMVKNIFSRFLLHVY 267 (310)
Q Consensus 194 ~~~~~d~~~~~~~sgD~npiH~d~~~A~~~gf~~~i~hG~~~~~~~~~~~~~~~~----~--g~~~~~~~~~~rf~~Pv~ 267 (310)
..++.++..|++++||+||+|+|++||+..+|+++|+|+++...+.......... . ++.......+++|.+||+
T Consensus 19 tvt~~dI~~FA~~~GD~nPlh~D~e~A~~~~fg~~iA~~~~~~~~gl~~~~~~~~~~~l~~~~~~~~~~~q~~~f~~PV~ 98 (159)
T PRK13692 19 EVEREKIREYAVAVQNDDAAYFEEDAAAELGYKGLLAPLTFICVFGYKAQSAFFKHANIAVADAQIVQVDQVLKFEKPIV 98 (159)
T ss_pred EeCHHHHHHHHHHHCCCCCCccCHHHHHhcCCCCcccChHHHHHhhhhhhhhhhhcccCCCCccceEeeeeEEEEeCCcc
Confidence 5689999999999999999999999999999999999988754332211111110 0 011112347999999999
Q ss_pred CCCEEEEEEEEE-----C--cEEEEEEE-EecCCcEEEEEEEEEEe
Q 021623 268 PGETLVTEMWLQ-----G--LRVIYQVK-VKERNRSALSGFVDVHR 305 (310)
Q Consensus 268 ~gd~l~~~~~~~-----~--~~v~~~~~-~~~~g~~vl~g~a~v~~ 305 (310)
+||+|+++.++. + +.++++++ .||+|++|+++++++.-
T Consensus 99 ~GDtL~~~~eV~~~~~~~~~giv~~~~~v~Nq~Ge~V~~~~~~~~~ 144 (159)
T PRK13692 99 AGDKLYCDVYVDSVREAHGTQIIVTKNIVTNEEGDVVQETYTTLAG 144 (159)
T ss_pred CCCEEEEEEEEEEEEEcCCceEEEEEEEEEcCCCCEEEEEEEEEEE
Confidence 999999998872 1 46888877 59999999999987753
No 24
>cd03450 NodN NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.
Probab=99.71 E-value=6e-17 Score=132.90 Aligned_cols=143 Identities=11% Similarity=0.069 Sum_probs=109.0
Q ss_pred cCCCChhhhcCCCCCCcceEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccceeeeccccCCCCCCCCC
Q 021623 4 SSGINPELLLSQKLPEQKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAID 83 (310)
Q Consensus 4 ~~~~d~~~~vG~~~~~~~~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~ 83 (310)
+|. |+++++|.+++.....++|++||++||.++| |.||+|.|+.++ +.+||++.++++++...+.... ... .
T Consensus 4 ~~~-~~~~~vG~~~~~~~~~~vt~~di~~FA~~sg--D~nPiH~D~e~A--~~~gfg~~Ia~G~~t~sl~~~l--~~~-~ 75 (149)
T cd03450 4 SLA-DLAALVGQELGVSDWVTVDQERIDQFADATG--DHQWIHVDPERA--AAEPFGGTIAHGFLTLSLLPAL--TPQ-L 75 (149)
T ss_pred CHH-HHHHhCCCCcCCCCCEEECHHHHHHHHHhhC--CCCccccCHHHH--hhCCCCCeEECHHHHHHHHHHH--HHh-c
Confidence 444 7788999998762347899999999999999 899999999877 7779999999999987664332 110 0
Q ss_pred CCCCCCCCceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCe-EEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021623 84 LPGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKA-AILEIETKSYNAESGELLCMNRMTAFL 155 (310)
Q Consensus 84 ~~~~~~~~~~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G-~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 155 (310)
.+ .+-...+..++.|+++|++|+++||+|+++.+|.+++++.++ ..++++.++......+++|..++.++|
T Consensus 76 ~~-~~~~~~~~~~g~~~~rF~~PV~~GDtl~~~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 147 (149)
T cd03450 76 FR-VEGVKMGVNYGLDKVRFPAPVPVGSRVRGRFTLLSVEELKGGGVQVTLEVTVEIEGEDKPACVAEWISRL 147 (149)
T ss_pred cc-CCCceEEEEeeccEEEeCcceeCCcEEEEEEEEEEEEEcCCCeEEEEEEEEEEEeCCCCceEEEEEEEee
Confidence 11 011112345788999999999999999999999999998865 777877776655556777777766554
No 25
>cd03452 MaoC_C MaoC_C The C-terminal hot dog fold of the MaoC (monoamine oxidase C) dehydratase regulatory protein. Orthologs of MaoC include PaaZ [Escherichia coli] and PaaN [Pseudomonas putida], which are putative ring-opening enzymes involved in phenylacetic acid degradation. The C-terminal domain of MaoC has sequence similarity to (R)-specific enoyl-CoA hydratase,Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. MaoC also has an N-terminal PutA domain like that found in the E. coli PutA proline dehydrogenase and other members of the aldehyde dehydrogenase family.
Probab=99.70 E-value=1.3e-16 Score=130.18 Aligned_cols=133 Identities=16% Similarity=0.102 Sum_probs=105.8
Q ss_pred hcCCCCCCcceEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccceeeeccccCCCCCCCCCCCCCCCCC
Q 021623 12 LLSQKLPEQKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDP 91 (310)
Q Consensus 12 ~vG~~~~~~~~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~ 91 (310)
-+|.+++. ...++|+.+|++||.+.| |.||+|.|+.++ +.++|++.+|++++...+.... .. ...++ .
T Consensus 6 ~vG~~~~~-~~~tvt~~~i~~Fa~~tg--D~nPiH~D~e~A--~~~~fg~~ia~G~l~~s~~~~l--~~-~~~~~----~ 73 (142)
T cd03452 6 RPGDSLLT-HRRTVTEADIVNFACLTG--DHFYAHMDEIAA--KASFFGKRVAHGYFVLSAAAGL--FV-DPAPG----P 73 (142)
T ss_pred CCCCEEee-CCEEEcHHHHHHHHHhhC--CCCccccCHHHH--hhCCCCCeeecHHHHHHHHhhh--Cc-cCCcc----c
Confidence 37999875 578999999999999999 899999999876 7789999999999987666443 10 00111 1
Q ss_pred ceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCC--eEEEEEEEEEEECCCCcEEEEEEEEEEEec
Q 021623 92 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGK--AAILEIETKSYNAESGELLCMNRMTAFLRG 157 (310)
Q Consensus 92 ~~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~--G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg 157 (310)
...-|+.|+++|++|+++||+|+++.+|.++.++.+ ..+++++.+++ ||+|++|++.+..++++.
T Consensus 74 ~~~~~g~~~~rf~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~-nq~g~~V~~~~~~~~~~~ 140 (142)
T cd03452 74 VLANYGLENLRFLEPVYPGDTIQVRLTCKRKIPRDGQDYGVVRWDAEVT-NQNGELVASYDILTLVAK 140 (142)
T ss_pred EEEEeccceEEECCCCCCCCEEEEEEEEEEEeecCCCCcEEEEEEEEEE-ecCCCEEEEEEehHeeEe
Confidence 112367899999999999999999999999987643 35678888864 899999999999888764
No 26
>cd03446 MaoC_like MoaC_like Similar to the MaoC (monoamine oxidase C) dehydratase regulatory protein but without the N-terminal PutA domain. This protein family has a hot-dog fold similar to that of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=99.68 E-value=3.6e-16 Score=127.06 Aligned_cols=132 Identities=16% Similarity=0.142 Sum_probs=103.0
Q ss_pred hcCCCCCCcceEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccceeeeccccCCCCCCCCCCCCCCCCC
Q 021623 12 LLSQKLPEQKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDP 91 (310)
Q Consensus 12 ~vG~~~~~~~~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~ 91 (310)
-+|.+++. .+.++|+++|++||.++| |.||+|.|+..+ +.+||++.++|+++...+.... .. ..++. -.-
T Consensus 6 ~vG~~~~~-~~~tvt~~~i~~fa~~~g--D~np~H~D~~~A--~~~~~~~~ia~G~~~~a~~~~~--~~--~~~~~-~~~ 75 (140)
T cd03446 6 EIGQVFES-VGRTVTEADVVMFAGLSG--DWNPIHTDAEYA--KKTRFGERIAHGLLTLSIATGL--LQ--RLGVF-ERT 75 (140)
T ss_pred cCCCEecc-CCEEECHHHHHHHHHhhC--CCcccccCHHHH--ccCCCCCceeccccHHHHHhhH--hh--hcccc-cce
Confidence 47999875 678999999999999999 899999998876 7789999999999876544322 10 11110 011
Q ss_pred ceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCC--eEEEEEEEEEEECCCCcEEEEEEEEEE
Q 021623 92 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGK--AAILEIETKSYNAESGELLCMNRMTAF 154 (310)
Q Consensus 92 ~~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~--G~~v~~~~~~~~~~~Ge~v~~~~~t~~ 154 (310)
....++.++++|++|+++||+|+++.+|.++.++.+ ..+++++.++ .||+|++|++.+.+.+
T Consensus 76 ~~~~~g~~~~~f~~pv~~GD~l~~~~~v~~~~~~~~~~~~~v~~~~~~-~nq~g~~v~~~~~~~l 139 (140)
T cd03446 76 VVAFYGIDNLRFLNPVFIGDTIRAEAEVVEKEEKDGEDAGVVTRRIEV-VNQRGEVVQSGEMSLL 139 (140)
T ss_pred eeEEeccceEEEcCCCCCCCEEEEEEEEEEecccCCCCceEEEEEEEE-EcCCCCEEEEEEEeee
Confidence 224678899999999999999999999999987642 2567888775 4899999999998765
No 27
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=99.68 E-value=2.3e-16 Score=158.00 Aligned_cols=111 Identities=23% Similarity=0.208 Sum_probs=91.4
Q ss_pred eecCHHHHHHHHHHhCCCCCCCCCHHHHhhCCCCCceechHHHHHHHHHHHHHHhhcCCC-ceEEEEEEEECcCCCCCCE
Q 021623 193 EDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDP-NMVKNIFSRFLLHVYPGET 271 (310)
Q Consensus 193 ~~~~~~d~~~~~~~sgD~npiH~d~~~A~~~gf~~~i~hG~~~~~~~~~~~~~~~~~g~~-~~~~~~~~rf~~Pv~~gd~ 271 (310)
...+..|+..|+.+|||+||||+|++||+..+|+++|+|||++++++.+++..+. ++.. ..+...++||++||++||+
T Consensus 539 ~tvt~~dI~~FA~~sgD~nPiH~D~e~A~~s~fg~~Ia~G~l~~sl~~~l~~~~~-~~~~~~~~g~~~~rF~~PV~~GDt 617 (663)
T TIGR02278 539 RTVTEADIALFAALSGDHFYAHMDEIAARESFFGKRVAHGYFVLSAAAGLFVDPA-PGPVLANYGLENLRFLEPVGPGDT 617 (663)
T ss_pred eEEcHHHHHHHHHhhCCCCcccCCHHHHhhCCCCCceeCHHHHHHHHHHHhhccC-ccchhhhcccceEEEcCCCCCCCE
Confidence 3578999999999999999999999999999999999999999999988775542 2211 1233469999999999999
Q ss_pred EEEEEEEE------C---cEEEEEEE-EecCCcEEEEEEEEEE
Q 021623 272 LVTEMWLQ------G---LRVIYQVK-VKERNRSALSGFVDVH 304 (310)
Q Consensus 272 l~~~~~~~------~---~~v~~~~~-~~~~g~~vl~g~a~v~ 304 (310)
|+++.++. + +.+++++. .||+|++|++++..+.
T Consensus 618 l~~~~~V~e~~~~~~~~~g~v~~~~~v~nq~G~~Vl~~~~~~l 660 (663)
T TIGR02278 618 IQVRLTVKRKTPRDEKTYGVVEWAAEVVNQNGEPVATYDVLTL 660 (663)
T ss_pred EEEEEEEEEEEecCCCCceEEEEEEEEEcCCCCEEEEEEEHHh
Confidence 99998872 1 25778777 5999999999987654
No 28
>cd03454 YdeM YdeM is a Bacillus subtilis protein that belongs to a family of prokaryotic proteins of unkown function. YdeM has sequence similarity to the hot-dog fold of (R)-specific enoyl-CoA hydratase. Other enzymes with this fold include the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=99.66 E-value=4.5e-16 Score=126.57 Aligned_cols=133 Identities=14% Similarity=0.140 Sum_probs=101.7
Q ss_pred hcCCCCCCcceEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccceeeeccccCCCCCCCCCCCCCCCCC
Q 021623 12 LLSQKLPEQKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDP 91 (310)
Q Consensus 12 ~vG~~~~~~~~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~ 91 (310)
.+|..+.. ..+++|+++|++||.+ | |.||+|.|+..+ +.+||++.++|+++...+.... ... .. +..+.
T Consensus 5 ~vG~~~~~-~~~~vt~~~v~~Fa~~-~--D~npih~D~e~A--~~~~~~~~ia~g~~~~~~~~~~--~~~-~~--~~~~~ 73 (140)
T cd03454 5 VIGQRFTS-GSYTVTEEEIIAFARE-F--DPQPFHLDEEAA--KESLFGGLAASGWHTAAITMRL--LVD-AG--LSGSA 73 (140)
T ss_pred CCccEEEe-CCEEEcHHHHHHHHHc-c--CCCccCcCHHHH--hcCCCCCeeechHHHHHHHHHh--hhh-hc--cccce
Confidence 47888876 6789999999999997 8 899999998876 7789999999996554333221 100 01 11112
Q ss_pred ceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcC-C-e-EEEEEEEEEEECCCCcEEEEEEEEEEEe
Q 021623 92 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKG-K-A-AILEIETKSYNAESGELLCMNRMTAFLR 156 (310)
Q Consensus 92 ~~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~-~-G-~~v~~~~~~~~~~~Ge~v~~~~~t~~~r 156 (310)
....++.++++|++|+++||+|+++.+|.++.++. + + .++++++++ .||+|++|++.+.+++++
T Consensus 74 ~~~~~~~~~~~f~~pv~~Gd~l~~~~~v~~~~~~~~~~~~~~v~~~~~~-~nq~g~~v~~~~~~~~~~ 140 (140)
T cd03454 74 SGGSPGIDELRWPRPVRPGDTLSVEVEVLDKRPSRSRPDRGIVTLRSET-LNQRGEVVLTFEATVLVR 140 (140)
T ss_pred EEEEcceeeeEeCCCCCCCCEEEEEEEEEEEeecCCCCCCeEEEEEEEE-EcCCCCEEEEEEehheeC
Confidence 34567789999999999999999999999999752 1 2 457888885 589999999999887753
No 29
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=99.66 E-value=5.7e-16 Score=155.98 Aligned_cols=111 Identities=21% Similarity=0.152 Sum_probs=91.1
Q ss_pred eecCHHHHHHHHHHhCCCCCCCCCHHHHhhCCCCCceechHHHHHHHHHHHHHHhhcCCC-ceEEEEEEEECcCCCCCCE
Q 021623 193 EDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDP-NMVKNIFSRFLLHVYPGET 271 (310)
Q Consensus 193 ~~~~~~d~~~~~~~sgD~npiH~d~~~A~~~gf~~~i~hG~~~~~~~~~~~~~~~~~g~~-~~~~~~~~rf~~Pv~~gd~ 271 (310)
...+..|+..|+.++||+||||+|+++|+..||+++|+|||++++++.+++..+. ++.. ..+...++||++||++||+
T Consensus 551 ~tvt~~di~~FA~lsgD~nPiH~D~e~A~~~~fg~~ia~G~l~~sl~~~l~~~~~-~~~~~~~~g~~~~rF~~PV~~GDt 629 (675)
T PRK11563 551 RTVTEADIVNFACLSGDTFYAHMDEIAAAANFFGGRVAHGYFVLSAAAGLFVDPA-PGPVLANYGLENLRFLTPVKPGDT 629 (675)
T ss_pred EEEcHHHHHHHHHhhCCCCccccCHHHHhhCCCCCceeCHHHHHHHHHHHhhccC-ccchhhhcccceEEEcCCCCCCCE
Confidence 3678999999999999999999999999999999999999999999988775542 2211 1233358999999999999
Q ss_pred EEEEEEEE-----C----cEEEEEEE-EecCCcEEEEEEEEEE
Q 021623 272 LVTEMWLQ-----G----LRVIYQVK-VKERNRSALSGFVDVH 304 (310)
Q Consensus 272 l~~~~~~~-----~----~~v~~~~~-~~~~g~~vl~g~a~v~ 304 (310)
|+++.++. . +.++++++ .||+|++|++|+..+.
T Consensus 630 l~~~~~V~~~~~~~~~~~~~v~~~~~~~nq~G~~V~~~~~~~l 672 (675)
T PRK11563 630 IQVRLTCKRKTPRRQAPYGVVRWDVEVTNQDGELVATYDILTL 672 (675)
T ss_pred EEEEEEEEEEEecCCCCceEEEEEEEEEECCCCEEEEEEEHHh
Confidence 99998862 1 35777777 4999999999987654
No 30
>cd03451 FkbR2 FkbR2 is a Streptomyces hygroscopicus protein with a hot dog fold that belongs to a conserved family of proteins found in prokaryotes and archaea but not in eukaryotes. FkbR2 has sequence similarity to (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The function of FkbR2 is unknown.
Probab=99.65 E-value=9.5e-16 Score=125.44 Aligned_cols=134 Identities=16% Similarity=0.129 Sum_probs=104.1
Q ss_pred hcCCCCCCcceEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccceeeeccccCCCCCCCCCCCCCCCCC
Q 021623 12 LLSQKLPEQKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDP 91 (310)
Q Consensus 12 ~vG~~~~~~~~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~ 91 (310)
-+|.+++....+++|+++|++||.++| |.||+|.|+..+ +.++|++.++|+++.+.+.... . .+.+.- -
T Consensus 8 ~vG~~~~~~~~~tvt~~~i~~fa~~~g--d~~piH~D~~~a--~~~~~~~~ia~G~l~~~~~~~~--~----~~~~~~-~ 76 (146)
T cd03451 8 TVGQVFEHAPGRTVTEADNVLFTLLTM--NTAPLHFDAAYA--AKTEFGRRLVNSLFTLSLALGL--S----VNDTSL-T 76 (146)
T ss_pred CCccEEecCCCeEEcHHHHHHHHHhhC--CCCccccCHHHH--hhCCCCCccccHHhHHHHHhhh--e----ehhccc-c
Confidence 479998632468999999999999999 899999999876 7789999999999987555332 1 111100 0
Q ss_pred ceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcC-C--eEEEEEEEEEEECCCCcEEEEEEEEEEEec
Q 021623 92 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKG-K--AAILEIETKSYNAESGELLCMNRMTAFLRG 157 (310)
Q Consensus 92 ~~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~-~--G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg 157 (310)
.....+.++++|++|+++||+|+++.+|.+++++. + ..+++++.++ .||+|++|++.+.+++++.
T Consensus 77 ~~~~~~~~~~~f~~pv~~GDtl~~~~~v~~~~~~~~~~~~~~v~~~~~~-~nq~g~~V~~~~~~~~~~~ 144 (146)
T cd03451 77 AVANLGYDEVRFPAPVFHGDTLYAESEVLSKRESKSRPDAGIVTVRTVG-YNQDGEPVLSFERTALVPK 144 (146)
T ss_pred ceeccCccEEEecCCCCCCCEEEEEEEEEEEecCCCCCCCeEEEEEEEE-ECCCCCEEEEEEehhEEEc
Confidence 11234456999999999999999999999998752 2 2577888885 4899999999999998864
No 31
>cd03453 SAV4209_like SAV4209_like. Similar in sequence to the Streptomyces avermitilis SAV4209 protein, with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=99.62 E-value=2.7e-15 Score=120.02 Aligned_cols=125 Identities=15% Similarity=0.131 Sum_probs=97.8
Q ss_pred cCCCCCCcceEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccceeeeccccCCCCCCCCCCCCCCCCCc
Q 021623 13 LSQKLPEQKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPR 92 (310)
Q Consensus 13 vG~~~~~~~~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~~ 92 (310)
||.++++ .++++|+++|++||..+| |.||+|.|+..+ +..||++.++++++...+.... ... .++ +..
T Consensus 1 vG~~~~~-~~~~vt~~~i~~fa~~sg--D~npiH~D~~~A--~~~g~~~~i~~G~~~~~~~~~~--~~~-~~~----~~~ 68 (127)
T cd03453 1 VGDELPP-LTPPVSRADLVRYAGASG--DFNPIHYDEDFA--KKVGLPGVIAHGMLTMGLLGRL--VTD-WVG----DPG 68 (127)
T ss_pred CCccCCc-eeeecCHHHHHHHHHhhc--CCCccccCHHHH--HHcCCCCcEecHHHHHHHHHHH--HHH-HcC----Ccc
Confidence 6889988 789999999999999999 899999998877 6779999999999877554332 110 011 122
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEE
Q 021623 93 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMT 152 (310)
Q Consensus 93 ~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t 152 (310)
.+ .+++++|++|+++||+|+++.+|.+++.++...+++++.++ .||+|++|++.+..
T Consensus 69 ~i--~~~~~rf~~Pv~~Gdtl~~~~~v~~~~~~~~~~~v~~~~~~-~nq~g~~v~~g~a~ 125 (127)
T cd03453 69 RV--VSFGVRFTKPVPVPDTLTCTGIVVEKTVADGEDALTVTVDA-TDQAGGKKVLGRAI 125 (127)
T ss_pred ce--EEEEEEECCcCcCCCEEEEEEEEEEEEecCCCcEEEEEEEE-EEcCCCEEEEEEEE
Confidence 23 35679999999999999999999999876432357778775 48999999987754
No 32
>cd03449 R_hydratase (R)-hydratase [(R)-specific enoyl-CoA hydratase] catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. (R)-hydratase contains a hot-dog fold similar to those of thioesterase II, and beta-hydroxydecanoyl-ACP dehydratase, MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit. The active site lies within a substrate-binding tunnel formed by the (R)-hydratase homodimer. A subset of the bacterial (R)-hydratases contain a C-terminal phosphotransacetylase (PTA) domain.
Probab=99.57 E-value=1.9e-14 Score=114.79 Aligned_cols=125 Identities=14% Similarity=0.117 Sum_probs=99.9
Q ss_pred cCCCCCCcceEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccceeeeccccCCCCCCCCCCCCCCCCCc
Q 021623 13 LSQKLPEQKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPR 92 (310)
Q Consensus 13 vG~~~~~~~~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~~ 92 (310)
+|..+ . ...++++.++++||..+| |.||+|.|+..+ +.+||++.+++++|...+.... .. . .++..
T Consensus 3 ~G~~~-~-~~~tv~~~~~~~fa~~~g--d~npiH~D~~~A--~~~g~~~~i~~g~~~~~~~~~~--~~-----~-~~~g~ 68 (128)
T cd03449 3 VGDSA-S-LTRTITEEDVELFAELSG--DFNPIHLDEEYA--KKTRFGGRIAHGMLTASLISAV--LG-----T-LLPGP 68 (128)
T ss_pred CCCEE-E-EEEEEcHHHHHHHHHHhC--CCCCccCCHHHH--hhCCCCCceecHHHHHHHHHHH--Hh-----c-cCCCc
Confidence 67788 3 678999999999999999 899999999877 6779999999999987654332 11 0 11224
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEE
Q 021623 93 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 154 (310)
Q Consensus 93 ~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~ 154 (310)
+.++.+++++|++|+++||+|+++++|.++..+ ++ +++++.++ .|++|++|++.+.+++
T Consensus 69 ~~~~~~~~~~f~~Pv~~gd~l~~~~~v~~~~~~-~~-~v~~~~~~-~~~~g~~v~~g~~~~~ 127 (128)
T cd03449 69 GTIYLSQSLRFLRPVFIGDTVTATVTVTEKRED-KK-RVTLETVC-TNQNGEVVIEGEAVVL 127 (128)
T ss_pred eEEEEEEEEEECCCccCCCEEEEEEEEEEEecC-CC-EEEEEEEE-EeCCCCEEEEEEEEEe
Confidence 668899999999999999999999999999754 23 45667665 4789999999998765
No 33
>cd03455 SAV4209 SAV4209 is a Streptomyces avermitilis protein with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The alpha- and gamma-proteobacterial members of this CD have, in addition to a hot dog fold, an N-terminal extension.
Probab=99.54 E-value=3.5e-14 Score=112.93 Aligned_cols=122 Identities=11% Similarity=0.051 Sum_probs=95.7
Q ss_pred CCCCCCcceEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccceeeeccccCCCCCCCCCCCCCCCCCce
Q 021623 14 SQKLPEQKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPRL 93 (310)
Q Consensus 14 G~~~~~~~~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~~~ 93 (310)
|..++. ..+++|+.+|.+||.+.| |.||+|.|+..+ +..||++.+++.+|...+.... ... . ++ .+
T Consensus 1 g~~~~~-~~~~vt~~~i~~fa~~s~--D~~piH~D~~~A--~~~g~~~~ia~G~~~~~~~~~~--~~~--~--~~---~~ 66 (123)
T cd03455 1 GDELPR-LSIPPDPTLLFRYSAATR--DFHRIHHDRDYA--RAVGYPDLYVNGPTLAGLVIRY--VTD--W--AG---PD 66 (123)
T ss_pred CCcCCc-EEecCCHHHHHHHHhhcC--CCCcccCCHHHH--HhcCCCceEEEHHHHHHHHHHH--HHH--c--cC---Cc
Confidence 456666 788999999999999999 899999998776 6679999999999887655432 110 0 11 12
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEE
Q 021623 94 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTA 153 (310)
Q Consensus 94 ~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~ 153 (310)
....+++++|++|+.+||+|+++.+|.++++. + +++++.++ .||+|++|++.+.+.
T Consensus 67 ~~~~~~~~rf~~pv~~Gdtl~~~~~v~~~~~~-~--~v~~~~~~-~nq~G~~v~~g~a~v 122 (123)
T cd03455 67 ARVKSFAFRLGAPLYAGDTLRFGGRVTAKRDD-E--VVTVELWA-RNSEGDHVMAGTATV 122 (123)
T ss_pred ceEEEEEEEeeccccCCCEEEEEEEEEeeccC-c--EEEEEEEE-EcCCCCEEEeEEEEE
Confidence 34457899999999999999999999987542 2 78888886 489999999888664
No 34
>cd03441 R_hydratase_like (R)-hydratase [(R)-specific enoyl-CoA hydratase]. Catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. The structure of the monomer includes a five-strand antiparallel beta-sheet wrapped around a central alpha helix, referred to as a hot dog fold. The active site lies within a substrate-binding tunnel formed by the homodimer. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit.
Probab=99.50 E-value=2e-13 Score=108.59 Aligned_cols=120 Identities=19% Similarity=0.187 Sum_probs=96.0
Q ss_pred ceEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccceeeeccccCCCCCCCCCCCCCCCCCceeeeeeEE
Q 021623 21 KTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPRLLLHGQQY 100 (310)
Q Consensus 21 ~~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~~~~vH~~~~ 100 (310)
..+.+++.+++.||.++| |.||+|.|+..+ +..||++.++|++|...+.... ... .+++ ..+.++++++
T Consensus 6 ~~~~~~~~~~~~fa~~~g--d~npiH~d~~~A--~~~~~~~~i~~g~~~~~~~~~~--~~~-~~~~----~~~~~~~~~~ 74 (127)
T cd03441 6 SGRTVTEADIALFARLSG--DPNPIHVDPEYA--KAAGFGGRIAHGMLTLSLASGL--LVQ-WLPG----TDGANLGSQS 74 (127)
T ss_pred cceEcCHHHHHHHHHHhC--CCCccccCHHHH--HhCCCCCceechHHHHHHHHhh--hhh-hccC----cccceeEEeE
Confidence 478999999999999999 899999998777 7779999999999988766543 110 1111 2457899999
Q ss_pred EEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEE
Q 021623 101 MELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMT 152 (310)
Q Consensus 101 ~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t 152 (310)
++|++|+++||+|+++.+|.++.++....+++++... .|++|++|++.+.+
T Consensus 75 ~~f~~Pv~~Gd~l~~~~~v~~~~~~~~~~~v~~~~~~-~n~~g~~v~~g~~~ 125 (127)
T cd03441 75 VRFLAPVFPGDTLRVEVEVLGKRPSKGRGVVTVRTEA-RNQGGEVVLSGEAT 125 (127)
T ss_pred EEEeCCcCCCCEEEEEEEEEEeeccCCCcEEEEEEEE-EeCCCCEEEEEEEE
Confidence 9999999999999999999999887533346777775 47899999885544
No 35
>PRK08190 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated
Probab=99.44 E-value=3.7e-13 Score=130.05 Aligned_cols=130 Identities=12% Similarity=0.162 Sum_probs=104.3
Q ss_pred hcCCCCCCcceEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccceeeeccccCCCCCCCCCCCCCCCCC
Q 021623 12 LLSQKLPEQKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDP 91 (310)
Q Consensus 12 ~vG~~~~~~~~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~ 91 (310)
-+|.++. ..+++|+++++.||..+| |.||+|.|+..+ +.+||++.+++++|...+.... .. ..++ .
T Consensus 15 ~vG~~~~--~~rtvT~~di~~FA~lsG--D~nPiH~D~e~A--k~sgfg~~IahG~l~~s~~~~l--~~-~~~~-----g 80 (466)
T PRK08190 15 AIGDSAS--LVRTLTPDDIELFAAMSG--DVNPAHLDAAYA--ASDGFHHVVAHGMWGGALISAV--LG-TRLP-----G 80 (466)
T ss_pred CCCCEEe--eeEEecHHHHHHHHHHhC--CCCCCCcCHHHH--HhCCCCCceeCHHHHHHHHHHH--Hh-hhCC-----C
Confidence 3799985 578999999999999999 899999999877 7789999999999876554322 11 0122 2
Q ss_pred ceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEecc
Q 021623 92 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGA 158 (310)
Q Consensus 92 ~~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg~ 158 (310)
.+.+|.+++++|++|+++||+|+++.+|.+.+. ++| ++++++++ .||+|++|++.+.+++.+..
T Consensus 81 ~~~~~~~~~~rF~~PV~~GDtl~~~~~V~~~~~-~~~-~v~~~~~~-~nq~G~~V~~g~~~~l~~~~ 144 (466)
T PRK08190 81 PGTIYLGQSLRFRRPVRIGDTLTVTVTVREKDP-EKR-IVVLDCRC-TNQDGEVVITGTAEVIAPTE 144 (466)
T ss_pred cceEEEEEEEEEeCCcCCCCEEEEEEEEEEEEC-CCC-EEEEEEEE-EeCCCCEEEEEEEEeecccc
Confidence 357899999999999999999999999998653 334 56777775 48999999999999888644
No 36
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=99.35 E-value=2.5e-12 Score=129.21 Aligned_cols=131 Identities=18% Similarity=0.172 Sum_probs=102.0
Q ss_pred hcCCCCCCcceEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccceeeeccccCCCCCCCCCCCCCCCCC
Q 021623 12 LLSQKLPEQKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDP 91 (310)
Q Consensus 12 ~vG~~~~~~~~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~ 91 (310)
-||.+++. ..+++|++||++||..+| |.||+|.|+.++ +.++|++.++++++...+.... .. ...++ .
T Consensus 529 ~VG~~~~~-~~~tvt~~dI~~FA~~sg--D~nPiH~D~e~A--~~s~fg~~Ia~G~l~~sl~~~l--~~-~~~~~----~ 596 (663)
T TIGR02278 529 EIGDSLTT-HRRTVTEADIALFAALSG--DHFYAHMDEIAA--RESFFGKRVAHGYFVLSAAAGL--FV-DPAPG----P 596 (663)
T ss_pred CCCCCcCC-CCeEEcHHHHHHHHHhhC--CCCcccCCHHHH--hhCCCCCceeCHHHHHHHHHHH--hh-ccCcc----c
Confidence 47999876 678999999999999999 899999998766 6779999999999876554322 00 00111 0
Q ss_pred ceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCC-e-EEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021623 92 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGK-A-AILEIETKSYNAESGELLCMNRMTAFL 155 (310)
Q Consensus 92 ~~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~-G-~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 155 (310)
...-|+.|+++|++|+++||+|+++.+|.+++++.+ + .+++++.+++ ||+|++|++.+...++
T Consensus 597 ~~~~~g~~~~rF~~PV~~GDtl~~~~~V~e~~~~~~~~~g~v~~~~~v~-nq~G~~Vl~~~~~~lv 661 (663)
T TIGR02278 597 VLANYGLENLRFLEPVGPGDTIQVRLTVKRKTPRDEKTYGVVEWAAEVV-NQNGEPVATYDVLTLV 661 (663)
T ss_pred hhhhcccceEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEE-cCCCCEEEEEEEHHhc
Confidence 011267899999999999999999999999987643 2 3577887754 8999999999887664
No 37
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=99.28 E-value=9.2e-12 Score=125.65 Aligned_cols=131 Identities=16% Similarity=0.119 Sum_probs=102.0
Q ss_pred hcCCCCCCcceEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccceeeeccccCCCCCCCCCCCCCCCCC
Q 021623 12 LLSQKLPEQKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDP 91 (310)
Q Consensus 12 ~vG~~~~~~~~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~ 91 (310)
-||++++. ..+++|+++|+.||..+| |.||+|.|+.++ +.+||++.+++++|...+.... .. ...++
T Consensus 541 ~vG~~~~~-~~~tvt~~di~~FA~lsg--D~nPiH~D~e~A--~~~~fg~~ia~G~l~~sl~~~l--~~-~~~~~----- 607 (675)
T PRK11563 541 RIGDSLLT-ARRTVTEADIVNFACLSG--DTFYAHMDEIAA--AANFFGGRVAHGYFVLSAAAGL--FV-DPAPG----- 607 (675)
T ss_pred CCCCEecc-CCEEEcHHHHHHHHHhhC--CCCccccCHHHH--hhCCCCCceeCHHHHHHHHHHH--hh-ccCcc-----
Confidence 48999876 678999999999999999 899999999876 7779999999999987555332 10 00111
Q ss_pred ceee-eeeEEEEEeccCCCCcEEEEEEEEEEEEEcCC--eEEEEEEEEEEECCCCcEEEEEEEEEEEe
Q 021623 92 RLLL-HGQQYMELYKPFPSSASIRNEACIAGLHDKGK--AAILEIETKSYNAESGELLCMNRMTAFLR 156 (310)
Q Consensus 92 ~~~v-H~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~--G~~v~~~~~~~~~~~Ge~v~~~~~t~~~r 156 (310)
..+. .+-++++|++|+++||+|+++.+|.+++++.+ ..+++++.++. ||+|++|++.+...+.|
T Consensus 608 ~~~~~~g~~~~rF~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~-nq~G~~V~~~~~~~lv~ 674 (675)
T PRK11563 608 PVLANYGLENLRFLTPVKPGDTIQVRLTCKRKTPRRQAPYGVVRWDVEVT-NQDGELVATYDILTLVA 674 (675)
T ss_pred chhhhcccceEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEE-ECCCCEEEEEEEHHhcc
Confidence 1111 23368999999999999999999999987643 24688888864 89999999999876653
No 38
>COG2030 MaoC Acyl dehydratase [Lipid metabolism]
Probab=99.26 E-value=3.8e-11 Score=99.74 Aligned_cols=134 Identities=15% Similarity=0.154 Sum_probs=104.5
Q ss_pred hcCCCCCCcceEEechhHHHHHHhhcCCCCCCCCCcccccceeec-cCcCCccccceeeeccccCCCCCCCCCCCCCCCC
Q 021623 12 LLSQKLPEQKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHE-NGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHD 90 (310)
Q Consensus 12 ~vG~~~~~~~~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~-~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~ 90 (310)
-+|+.+.......++++|++.||...| |.||+|.|+..+ +. ++|++.++...+...+.... .. ..++.+
T Consensus 21 ~vG~~~~~~~~~~~t~~d~~~fa~~tg--D~qpiH~D~e~A--~~~~~fg~~iahG~~t~a~~~~~--~~----~~~~~~ 90 (159)
T COG2030 21 EVGQVFPHSPWRTVTEADIVLFAAVTG--DPNPIHLDPEAA--KKTSGFGGPIAHGMLTLALAMGL--VV----AALGDP 90 (159)
T ss_pred cCCcEEecCCceEecHHHHHHHHHhcC--CCCceecCHHHH--hccCCCCCEehhHHHHHHHHHHH--HH----HhccCc
Confidence 489877752346999999999999999 899999999887 66 58999999998776555432 10 001111
Q ss_pred CceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEe
Q 021623 91 PRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLR 156 (310)
Q Consensus 91 ~~~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~r 156 (310)
-.+.-.+..+++|++|+.+||+|+.++++.+++++++.-++.++.+++ ||+|+.|.....+.+++
T Consensus 91 ~~~~~~g~~~vRF~~PV~~Gdtl~~~~~v~~~~~~~~~G~v~~~~~~~-~~~g~~v~~~~~~~~~~ 155 (159)
T COG2030 91 SVGANLGGDEVRFVKPVFPGDTLRARVEVLDKRPSKSRGLVTLRLETV-NQEGELVLTLEATVLVL 155 (159)
T ss_pred ceeeeccccceEecCCCCCCCEEEEEEEEEEeeecCCceEEEEEEEEE-ccCCcEEEEEEEeEeEe
Confidence 144577889999999999999999999999999988744567776754 89999999999887664
No 39
>cd03447 FAS_MaoC FAS_MaoC, the MaoC-like hot dog fold of the fatty acid synthase, beta subunit. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and 17-beta-hydroxysteriod dehydrogenase (HSD).
Probab=99.24 E-value=4.2e-11 Score=95.58 Aligned_cols=116 Identities=11% Similarity=0.026 Sum_probs=84.9
Q ss_pred eEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccceeeeccccCCCCCCCCCCCCCCCCCceeeeeeEEE
Q 021623 22 TFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPRLLLHGQQYM 101 (310)
Q Consensus 22 ~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~~~~vH~~~~~ 101 (310)
....|+.|+..||...| |.||+|.|+..+ +.+||++.+++.++...+.... .... +++ .+.. ...++++
T Consensus 7 ~~~~t~~d~~~fa~lsG--D~nPiH~D~~~A--~~~g~~~~iahG~l~~~~~~~~--~~~~-~~~--~~~~--~~~~~~~ 75 (126)
T cd03447 7 LTITAPASNEPYARVSG--DFNPIHVSRVFA--SYAGLPGTITHGMYTSAAVRAL--VETW-AAD--NDRS--RVRSFTA 75 (126)
T ss_pred EEEEChHHHHHHHHHhC--CCCccCCCHHHH--HHcCCCCCeechhHHHHHHHHH--HHHh-ccC--CCcc--eEEEEEE
Confidence 56889999999999999 899999998766 6779999999998877554332 1000 111 1222 2234799
Q ss_pred EEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCC-CcEEEEEEEEE
Q 021623 102 ELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAES-GELLCMNRMTA 153 (310)
Q Consensus 102 ~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~-Ge~v~~~~~t~ 153 (310)
+|.+|+.+||+|+++.++.++.+ | .++++.++ .||+ |++|++.+...
T Consensus 76 rf~~PV~~gdtl~~~~~v~~~~~---~-~~~~~~~~-~nq~~g~~V~~g~~~v 123 (126)
T cd03447 76 SFVGMVLPNDELEVRLEHVGMVD---G-RKVIKVEA-RNEETGELVLRGEAEV 123 (126)
T ss_pred EEcccCcCCCEEEEEEEEEEEeC---C-eEEEEEEE-EECCCCCEEEEEEEEE
Confidence 99999999999999999998743 2 23455554 3788 99999888764
No 40
>PF13452 MaoC_dehydrat_N: N-terminal half of MaoC dehydratase; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1S9C_K 3OML_A 3KHP_A.
Probab=99.03 E-value=5.4e-10 Score=89.74 Aligned_cols=105 Identities=21% Similarity=0.122 Sum_probs=70.4
Q ss_pred eecCHHHHHHHHHHhCCCCCCCCCHHHHhhCCCCCceechHHHHHHHHHH--HHHHhhcCCCceE--EEEEEEECcCCCC
Q 021623 193 EDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRA--IIKFICRGDPNMV--KNIFSRFLLHVYP 268 (310)
Q Consensus 193 ~~~~~~d~~~~~~~sgD~npiH~d~~~A~~~gf~~~i~hG~~~~~~~~~~--~~~~~~~g~~~~~--~~~~~rf~~Pv~~ 268 (310)
...++.++.+|+...||.||+|+|+++|+..|+++.+++.++...+.... +... ++.+...+ .+.+++|.+|+++
T Consensus 12 ~~v~~~~i~~ya~avg~~~p~~~d~~~a~~~~~~~~~apPt~~~~~~~~~~~~~~~-~~~~~~~~vh~~~~~~~h~Pl~~ 90 (132)
T PF13452_consen 12 YTVTRRDIRRYALAVGDPNPLYLDEEYARAAGHGGLIAPPTFAVVLAWPAPAMFPD-LGFDLTRLVHGEQDIEFHRPLRP 90 (132)
T ss_dssp EEE-HHHHHHHHHHTT-CTTHHHHCTSS--TTSTT-B--GGGHHHHHHHCCGGCGC-CSS-GGGEEEEEEEEEESS--BS
T ss_pred EEECHHHHHHHHHHhCcCCccccCHhHhhccCCCCcccCHHHHhhhhcccceeeec-CCCChhhEEecCcEEEEeCCCCC
Confidence 35678999999999999999999999999999999999999877666532 2211 12233333 5789999999999
Q ss_pred CCEEEEEEEE-----E-C-c---EEEEEEE-EecCCcEEEE
Q 021623 269 GETLVTEMWL-----Q-G-L---RVIYQVK-VKERNRSALS 298 (310)
Q Consensus 269 gd~l~~~~~~-----~-~-~---~v~~~~~-~~~~g~~vl~ 298 (310)
||+|+++.++ + + | .+.++.. .|++|++|++
T Consensus 91 Gd~l~~~~~v~~v~~k~g~G~~~~v~~~~~~~~~~Ge~v~t 131 (132)
T PF13452_consen 91 GDTLTATSRVTDVYDKRGAGKGVFVTVETEYTDQDGELVAT 131 (132)
T ss_dssp SEEEEEEEEEEEEEEES-TTSEEEEEEEEEEE-CTTEEEEE
T ss_pred CCEEEEEEEEEEEEEecCCCCEEEEEEEEEEECCCCCEEEe
Confidence 9999998775 2 1 2 3445555 4899999875
No 41
>PRK13693 (3R)-hydroxyacyl-ACP dehydratase subunit HadB; Provisional
Probab=98.97 E-value=3e-09 Score=86.62 Aligned_cols=116 Identities=12% Similarity=0.085 Sum_probs=83.4
Q ss_pred hcCCCCCCcceEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccceeeeccccCCCCCCCCCCCCCCCCC
Q 021623 12 LLSQKLPEQKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDP 91 (310)
Q Consensus 12 ~vG~~~~~~~~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~ 91 (310)
-+|.+++. ..+++|+.||.+||.+.| |.||+|.|+..+ +..||++.+++..+...+.... ... . +..
T Consensus 10 ~vG~~~~~-~~~tvt~~di~~FA~~sg--D~nPiH~D~~~A--~~~g~~~~iahG~~~~a~~~~~--~~~--~----~~~ 76 (142)
T PRK13693 10 KVGDQLPE-KTYPLTRQDLVNYAGVSG--DLNPIHWDDEIA--KVVGLDTAIAHGMLTMGLGGGY--VTS--W----VGD 76 (142)
T ss_pred CCCCCcCc-cceeeCHHHHHHHHHHhC--CCCccccCHHHH--HhcCCCCcEecHHHHHHHHHHH--HHH--h----cCC
Confidence 48999976 678999999999999999 899999998766 6679999999998876544322 100 0 011
Q ss_pred ceeeeeeEEEEEeccCCCC-c----EEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCc
Q 021623 92 RLLLHGQQYMELYKPFPSS-A----SIRNEACIAGLHDKGKAAILEIETKSYNAESGE 144 (310)
Q Consensus 92 ~~~vH~~~~~~~~~Pl~~g-d----~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge 144 (310)
.+.+ .+++++|.+|+.+| | +++++.+|.++.+ +++ .+++...+. +++++
T Consensus 77 ~~~~-~~~~~rF~~pv~~g~D~~~~~l~~~~~V~~~~~-~~~-~v~~~~~~~-~~~~~ 130 (142)
T PRK13693 77 PGAV-TEYNVRFTAVVPVPNDGKGAELVFNGRVKSVDP-ESK-SVTIALTAT-TGGKK 130 (142)
T ss_pred Ccce-EEEEEEecccEECCCCccceEEEEEEEEEEecc-CCc-EEEEEEEEE-ECCcE
Confidence 2223 26799999999854 4 9999999999853 333 466666643 44443
No 42
>PF01575 MaoC_dehydratas: MaoC like domain; InterPro: IPR002539 The C terminus of the MaoC protein is found to share similarity with a wide variety of enzymes. All these enzymes contain multiple domains. This domain is found in parts of two enzymes that have been assigned dehydratase activities. A deletion mutant of the C-terminal 271 amino acids in Q02207 from SWISSPROT abolished its 2-enoyl-CoA hydratase activity, suggesting that this region may be a hydratase enzyme []. The maoC gene is part of a operon with maoA which is involved in the synthesis of monoamine oxidase [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1PN4_C 1PN2_B 1S9C_K 3OML_A 1Q6W_B 2B3M_A 3K67_B ....
Probab=98.84 E-value=6e-10 Score=88.37 Aligned_cols=115 Identities=14% Similarity=0.097 Sum_probs=78.5
Q ss_pred hhhcCCCCCCcceEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccceeeeccccCCCCCCCCCCCCCCC
Q 021623 10 ELLLSQKLPEQKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQH 89 (310)
Q Consensus 10 ~~~vG~~~~~~~~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~ 89 (310)
...+|..+.......+|+.++..||...| |.||+|.|+..+ +..||++.+++-.+...+.... ... .+++
T Consensus 3 ~~~~g~~~~~~~~~tit~~~~~~fa~~sg--D~nPiH~D~~~A--~~~gf~~~ivhG~~~~a~~~~~--~~~-~~~~--- 72 (122)
T PF01575_consen 3 QNRIGQGIRHSRSRTITEADIRQFAALSG--DFNPIHVDPEYA--RATGFGGPIVHGMLTLALASGL--LGD-WLGP--- 72 (122)
T ss_dssp CCCTTSEEEEEEEEEEEHHHHHHHHHHHT-----HHHH-HHHH--HTSTTSSSB-BHHHHHHHHHHH--HHH-HHST---
T ss_pred CCCCCCccccccCEEECHHHHHHHHHhhC--CCCcceecHHHH--hhcCCCCEEEccHHHHHHHHHH--HHH-hccC---
Confidence 34577777654689999999999999999 899999999866 7779999888887765443322 000 0111
Q ss_pred CCceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEE
Q 021623 90 DPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIET 135 (310)
Q Consensus 90 ~~~~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~ 135 (310)
+ ....-+..+++|.+|+.+||+|+++.++.+..+..+...+++..
T Consensus 73 ~-~~~~~~~~~~rF~~PV~~gdtl~~~~~v~~~~~~~~~~~v~~~~ 117 (122)
T PF01575_consen 73 N-PPARLGRFNVRFRAPVFPGDTLTAEVEVTEKREGKERVRVTVTV 117 (122)
T ss_dssp T-ECEEEEEEEEEESS--BTTEEEEEEEEEEEEEEEEEEEEEEEEE
T ss_pred c-cceEEEEEEEEEeccccCCCEEEEEEEEEEEEEcCceEEEEEEE
Confidence 1 23577789999999999999999999999987776443344443
No 43
>cd03448 HDE_HSD HDE_HSD The R-hydratase-like hot dog fold of the 17-beta-hydroxysteriod dehydrogenase (HSD), and Hydratase-Dehydrogenase-Epimerase (HDE) proteins. Other enzymes with this fold include MaoC dehydratase, and the fatty acid synthase beta subunit.
Probab=98.46 E-value=3.5e-07 Score=72.48 Aligned_cols=109 Identities=15% Similarity=0.083 Sum_probs=75.2
Q ss_pred ceEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccceeeeccccCCCCCCCCCCCCCCCCCceeeeeeEE
Q 021623 21 KTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPRLLLHGQQY 100 (310)
Q Consensus 21 ~~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~~~~vH~~~~ 100 (310)
....+++.++..|+. .| |.||+|.|+..+ +..||++.+++-.+...+.... ......++ .+..-...+
T Consensus 9 ~~~~~~~~~~~~~~~-Sg--D~nPiH~d~e~A--~~~g~~~~iahG~~t~a~~~~~--~~~~~~~~-----~~~~~~~~~ 76 (122)
T cd03448 9 VEIPTSPDQALLYRL-SG--DYNPLHIDPAFA--KAAGFPRPILHGLCTYGFAARA--VLEAFADG-----DPARFKAIK 76 (122)
T ss_pred EEecCCcChHHHHHH-hC--CCCccccCHHHH--HHcCCCCceehhHHHHHHHHHH--HHHHhcCC-----CcceeEEEE
Confidence 467899999999997 78 899999998866 6778999999888765443221 00000111 122344679
Q ss_pred EEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEE
Q 021623 101 MELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNR 150 (310)
Q Consensus 101 ~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~ 150 (310)
++|.+|+.+||+|+++.++. + + .++++..+ +++|++|++..
T Consensus 77 ~rF~~PV~~gDtl~~~~~~~-----~-~-~v~~~~~~--~~~g~~v~~g~ 117 (122)
T cd03448 77 VRFSSPVFPGETLRTEMWKE-----G-N-RVIFQTKV--VERDVVVLSNG 117 (122)
T ss_pred EEEcCCccCCCEEEEEEEEe-----C-C-EEEEEEEE--ccCCcEEEECC
Confidence 99999999999999987632 2 2 45666664 34788776543
No 44
>PRK04424 fatty acid biosynthesis transcriptional regulator; Provisional
Probab=98.31 E-value=1.2e-05 Score=68.42 Aligned_cols=79 Identities=19% Similarity=0.134 Sum_probs=58.5
Q ss_pred CCceechHHHHHHHHHHHHHHhhcCCCceEEEEEEEECcCCCCCCEEEEEEEEE---CcEEEEEEEEecCCcEEEEEEEE
Q 021623 226 SRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWLQ---GLRVIYQVKVKERNRSALSGFVD 302 (310)
Q Consensus 226 ~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~Pv~~gd~l~~~~~~~---~~~v~~~~~~~~~g~~vl~g~a~ 302 (310)
...|+||.+.++.+..++... .++........+++|.+||++||+|.+++++. ++.+.+.+...++|+.+++|+..
T Consensus 100 ~~~i~hG~f~~aqa~~la~~~-~~~~~~~~~i~~irF~kPV~pGD~L~~ea~v~~~~~~~~~v~~~~~v~g~~V~ege~~ 178 (185)
T PRK04424 100 KTGIARGHHLFAQANSLAVAV-IDAELALTGVANIRFKRPVKLGERVVAKAEVVRKKGNKYIVEVKSYVGDELVFRGKFI 178 (185)
T ss_pred CCCeecHHHHHHHHHHHHHHh-cCCcEEEEEeeeEEEccCCCCCCEEEEEEEEEEccCCEEEEEEEEEECCEEEEEEEEE
Confidence 468999999999887654432 23333333445899999999999999999874 24556666656789999999988
Q ss_pred EEe
Q 021623 303 VHR 305 (310)
Q Consensus 303 v~~ 305 (310)
+..
T Consensus 179 ~~~ 181 (185)
T PRK04424 179 MYR 181 (185)
T ss_pred EEE
Confidence 765
No 45
>PRK00006 fabZ (3R)-hydroxymyristoyl-ACP dehydratase; Reviewed
Probab=98.30 E-value=1.1e-05 Score=65.96 Aligned_cols=91 Identities=14% Similarity=0.066 Sum_probs=60.6
Q ss_pred CCHHHHhhCCCCCceechHHHH---HHHHHHHHHHhhc--CCCceEEEE-EEEECcCCCCCCEEEEEEEEE---CcEEEE
Q 021623 215 SDPMVAKAAGFSRPILHGLCTM---GFAVRAIIKFICR--GDPNMVKNI-FSRFLLHVYPGETLVTEMWLQ---GLRVIY 285 (310)
Q Consensus 215 ~d~~~A~~~gf~~~i~hG~~~~---~~~~~~~~~~~~~--g~~~~~~~~-~~rf~~Pv~~gd~l~~~~~~~---~~~v~~ 285 (310)
.|..|.+...++.+|+||.+.. +.+..++...... +....+.++ +++|.+||++||+|++++++. ++.+.+
T Consensus 45 ~d~~~~~ghfp~~pi~PG~l~iE~~aQ~~~~~~~~~~~~~~~~~~l~gi~~~kF~~pv~pGd~l~i~~~i~~~~~~~v~~ 124 (147)
T PRK00006 45 INEPFFQGHFPGYPVMPGVLIIEAMAQAAGVLALKSEENKGKLVYFAGIDKARFKRPVVPGDQLILEVELLKQRRGIWKF 124 (147)
T ss_pred CCCccccCCCcCCCcCchhHHHHHHHHHHHHHHhcCcCcCCcEEEEeeeeEEEEccccCCCCEEEEEEEEEEeeCCEEEE
Confidence 3444555555678999998774 3333332211111 111223444 799999999999999998873 457777
Q ss_pred EEEEecCCcEEEEEEEEEEe
Q 021623 286 QVKVKERNRSALSGFVDVHR 305 (310)
Q Consensus 286 ~~~~~~~g~~vl~g~a~v~~ 305 (310)
++...++|+.+++|++++..
T Consensus 125 ~~~~~~~g~~v~~~~~~~~~ 144 (147)
T PRK00006 125 KGVATVDGKLVAEAELMFAI 144 (147)
T ss_pred EEEEEECCEEEEEEEEEEEE
Confidence 77766789999999988764
No 46
>cd01288 FabZ FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid biosynthesis pathway.
Probab=98.29 E-value=1.1e-05 Score=64.17 Aligned_cols=92 Identities=15% Similarity=0.058 Sum_probs=62.9
Q ss_pred CCCCHHHHhhCCCCCceechHHHHHHHHHHHHHHhh------cCCCceEEE-EEEEECcCCCCCCEEEEEEEEE---CcE
Q 021623 213 LHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFIC------RGDPNMVKN-IFSRFLLHVYPGETLVTEMWLQ---GLR 282 (310)
Q Consensus 213 iH~d~~~A~~~gf~~~i~hG~~~~~~~~~~~~~~~~------~g~~~~~~~-~~~rf~~Pv~~gd~l~~~~~~~---~~~ 282 (310)
|..|..|++...++.+|+||.+..-++..+..-... .+....+.+ .+++|.+||++||+|++++++. ++.
T Consensus 28 v~~d~~~~~~hf~~~pi~Pg~l~iE~~aQ~~~~~~~~~~~~~~~~~~~l~~~~~~kf~~pv~pgd~l~i~~~v~~~~~~~ 107 (131)
T cd01288 28 VTINEPFFQGHFPGNPIMPGVLIIEALAQAAGILGLKSLEDFEGKLVYFAGIDKARFRKPVVPGDQLILEVELLKLRRGI 107 (131)
T ss_pred ecCCChhhcCCCCCCCcCCchHHHHHHHHHHHHHhhhcccccCCcEEEEeeecccEEccccCCCCEEEEEEEEEEeeCCE
Confidence 344555777777788999998885444433222111 111112333 5799999999999999998873 456
Q ss_pred EEEEEEEecCCcEEEEEEEEEE
Q 021623 283 VIYQVKVKERNRSALSGFVDVH 304 (310)
Q Consensus 283 v~~~~~~~~~g~~vl~g~a~v~ 304 (310)
+.+++..+.+|+.+++|+.++.
T Consensus 108 ~~~~~~~~~~g~~v~~~~~~~~ 129 (131)
T cd01288 108 GKFKGKAYVDGKLVAEAELMFA 129 (131)
T ss_pred EEEEEEEEECCEEEEEEEEEEE
Confidence 7777776778999999998764
No 47
>PLN02864 enoyl-CoA hydratase
Probab=98.19 E-value=6.5e-06 Score=75.66 Aligned_cols=111 Identities=13% Similarity=0.026 Sum_probs=75.1
Q ss_pred EEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccceeeeccccCCCCCCCCCCCCCCCCCceeeeeeEEEE
Q 021623 23 FTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPRLLLHGQQYME 102 (310)
Q Consensus 23 ~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~~~~vH~~~~~~ 102 (310)
...++.+..+||...| |.||+|.|+..+ +..||+..+++-++...+.... ......++ +.. ...+++++
T Consensus 193 ~~~t~~~~~~~a~lSG--D~NPiH~d~~~A--~~~gf~~~IaHGm~t~g~~~~~--~~~~~~~~---~~~--~~~~~~~r 261 (310)
T PLN02864 193 EDQTQPSQALLYRLSG--DYNPLHSDPMFA--KVAGFTRPILHGLCTLGFAVRA--VIKCFCNG---DPT--AVKTISGR 261 (310)
T ss_pred eeccChhHHHHHHhhC--CCCcccCCHHHH--hhCCCCCceeccHHHHHHHHHH--HHhhhcCC---CCc--eEEEEEEE
Confidence 4789999999999999 899999998766 7778998888876654322111 00000111 111 23468999
Q ss_pred EeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEE
Q 021623 103 LYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTA 153 (310)
Q Consensus 103 ~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~ 153 (310)
|.+|+.+||+|+++.+. .+ + .+.++... +++|++|++...++
T Consensus 262 F~~PV~pGdtl~~~~~~-----~~-~-~v~~~~~~--~~~g~~vl~G~a~~ 303 (310)
T PLN02864 262 FLLHVYPGETLVTEMWL-----EG-L-RVIYQTKV--KERNKAVLSGYVDL 303 (310)
T ss_pred EcCCccCCCEEEEEEEe-----CC-C-EEEEEEEE--ecCCeEEEEEEEEE
Confidence 99999999999766532 22 2 35566553 57899888876664
No 48
>PRK13188 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed
Probab=98.01 E-value=8.8e-05 Score=71.25 Aligned_cols=93 Identities=13% Similarity=0.081 Sum_probs=67.9
Q ss_pred CCCCHHHHhhCCCCCceechHHHHHHHH---HHHHHHhhcCC---CceEEEE-EEEECcCCCCCCEEEEEEEEE----Cc
Q 021623 213 LHSDPMVAKAAGFSRPILHGLCTMGFAV---RAIIKFICRGD---PNMVKNI-FSRFLLHVYPGETLVTEMWLQ----GL 281 (310)
Q Consensus 213 iH~d~~~A~~~gf~~~i~hG~~~~~~~~---~~~~~~~~~g~---~~~~~~~-~~rf~~Pv~~gd~l~~~~~~~----~~ 281 (310)
++.|..|++...++.+|+||++..-.++ ..+.....++. ...+.++ +++|.+||+|||+|++++++. ++
T Consensus 356 Vs~De~ff~GHFPg~PI~PGVL~IEaMAQaagil~~~~~~~~~g~lg~LlgI~kvKF~~PV~PGDtL~I~veI~~~~~~g 435 (464)
T PRK13188 356 VTMNEPFFQGHFPGNPVMPGVLQIEAMAQTGGILVLNTVPDPENYSTYFMKIDKVKFRQKVVPGDTLIFKVELLSPIRRG 435 (464)
T ss_pred cCCCcHHhhccCCCCCccccHHHHHHHHHHHHHHHhhccCCCCCceEEEEeccEEEEcCCCCCCCEEEEEEEEEEEecCC
Confidence 7888999988888899999998883333 33322111111 1234555 899999999999999998752 45
Q ss_pred EEEEEEEEecCCcEEEEEEEEEEe
Q 021623 282 RVIYQVKVKERNRSALSGFVDVHR 305 (310)
Q Consensus 282 ~v~~~~~~~~~g~~vl~g~a~v~~ 305 (310)
.+.+++...++|+.+++|+..+..
T Consensus 436 iv~f~g~~~vdGelVaeael~~~v 459 (464)
T PRK13188 436 ICQMQGKAYVNGKLVCEAELMAQI 459 (464)
T ss_pred EEEEEEEEEECCEEEEEEEEEEEE
Confidence 678888766899999999987754
No 49
>TIGR01750 fabZ beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ. This enzyme, FabZ, shows overlapping substrate specificity with FabA with regard to chain length in fatty acid biosynthesis. FabZ works preferentially on shorter chains and is often designated (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase, although its actual specificity is broader. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains.
Probab=97.67 E-value=0.0008 Score=54.34 Aligned_cols=79 Identities=13% Similarity=0.108 Sum_probs=54.0
Q ss_pred CCceechHHHHHHHHHHHHHHh---hc---CC--CceEEE-EEEEECcCCCCCCEEEEEEEEE---CcEEEEEEEEecCC
Q 021623 226 SRPILHGLCTMGFAVRAIIKFI---CR---GD--PNMVKN-IFSRFLLHVYPGETLVTEMWLQ---GLRVIYQVKVKERN 293 (310)
Q Consensus 226 ~~~i~hG~~~~~~~~~~~~~~~---~~---g~--~~~~~~-~~~rf~~Pv~~gd~l~~~~~~~---~~~v~~~~~~~~~g 293 (310)
+.++++|.+..-.+.+...-+. .. +. ...+.+ .+++|.+||+|||+|++.++.. ++.+.++++.+.+|
T Consensus 49 ~~pv~Pg~l~iE~~aQ~~~~~~~~~~~~~~~~~~~~~l~~~~~~kF~~~v~pGd~l~i~~~i~~~~~~~~~~~~~~~~~g 128 (140)
T TIGR01750 49 EKPIMPGVLIVEALAQAGGVLAILSLGGEIGKGKLVYFAGIDKAKFRRPVVPGDQLILHAEFLKKRRKIGKFKGEATVDG 128 (140)
T ss_pred CcCcChHHHHHHHHHHHHHHHheccccccCCCCcEEEEeecceeEECCccCCCCEEEEEEEEEEccCCEEEEEEEEEECC
Confidence 3578888776655544332111 01 11 123344 4899999999999999998873 35677777777889
Q ss_pred cEEEEEEEEEE
Q 021623 294 RSALSGFVDVH 304 (310)
Q Consensus 294 ~~vl~g~a~v~ 304 (310)
+.+++|++++.
T Consensus 129 ~~va~~~~~~~ 139 (140)
T TIGR01750 129 KVVAEAEITFA 139 (140)
T ss_pred EEEEEEEEEEE
Confidence 99999998764
No 50
>cd00493 FabA_FabZ FabA/Z, beta-hydroxyacyl-acyl carrier protein (ACP)-dehydratases: One of several distinct enzyme types of the dissociative, type II, fatty acid synthase system (found in bacteria and plants) required to complete successive cycles of fatty acid elongation. The third step of the elongation cycle, the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, is catalyzed by FabA or FabZ. FabA is bifunctional and catalyzes an additional isomerization reaction of trans-2-acyl-ACP to cis-3-acyl-ACP, an essential reaction to unsaturated fatty acid synthesis. FabZ is the primary dehydratase that participates in the elongation cycles of saturated as well as unsaturated fatty acid biosynthesis, whereas FabA is more active in the dehydration of beta-hydroxydecanoyl-ACP. The FabA structure is homodimeric with two independent active sites located at the dimer interface.
Probab=97.51 E-value=0.003 Score=49.96 Aligned_cols=77 Identities=16% Similarity=0.114 Sum_probs=51.7
Q ss_pred CceechHHHHHHHHHHHHHHhhc-CC-------CceEEE-EEEEECcCCCCCCEEEEEEEEE---CcEEEEEEEEecCCc
Q 021623 227 RPILHGLCTMGFAVRAIIKFICR-GD-------PNMVKN-IFSRFLLHVYPGETLVTEMWLQ---GLRVIYQVKVKERNR 294 (310)
Q Consensus 227 ~~i~hG~~~~~~~~~~~~~~~~~-g~-------~~~~~~-~~~rf~~Pv~~gd~l~~~~~~~---~~~v~~~~~~~~~g~ 294 (310)
.++++|.+..-++.+....+... +. ...+.+ -+++|.+||++||+|++++++. ++.+.+++....+|+
T Consensus 41 ~p~lPg~~~iE~~aQ~~~~~~~~~~~~~~~~~~~~~l~~~~~~kf~~~v~pgd~l~i~~~i~~~~~~~~~~~~~~~~~g~ 120 (131)
T cd00493 41 DPVMPGVLGIEAMAQAAAALAGLLGLGKGNPPRLGYLAGVRKVKFRGPVLPGDTLTLEVELLKVRRGLGKFDGRAYVDGK 120 (131)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHhcccccccCCcEEEEEEcceeEECCCcCCCCEEEEEEEEEEeeCCEEEEEEEEEECCE
Confidence 57888877766655444333211 11 123334 4899999999999999998873 357778777544699
Q ss_pred EEEEEEEEE
Q 021623 295 SALSGFVDV 303 (310)
Q Consensus 295 ~vl~g~a~v 303 (310)
++++|+..+
T Consensus 121 ~v~~~~~~~ 129 (131)
T cd00493 121 LVAEAELMA 129 (131)
T ss_pred EEEEEEEEE
Confidence 999998443
No 51
>TIGR02286 PaaD phenylacetic acid degradation protein PaaD. Sequences scoring between trusted and noise include those from archaea and other species not known to catabolize phenylacetic acid and which are not adjacent to other genes potentially involved with such a pathway.
Probab=97.47 E-value=0.0036 Score=48.68 Aligned_cols=78 Identities=21% Similarity=0.091 Sum_probs=54.2
Q ss_pred CceechHHHHHHHHHHHHHHhh-cCCCceEEEEEEEECcCCCCCCEEEEEEEEE--Cc-EEEEEEE-EecCCcEEEEEEE
Q 021623 227 RPILHGLCTMGFAVRAIIKFIC-RGDPNMVKNIFSRFLLHVYPGETLVTEMWLQ--GL-RVIYQVK-VKERNRSALSGFV 301 (310)
Q Consensus 227 ~~i~hG~~~~~~~~~~~~~~~~-~g~~~~~~~~~~rf~~Pv~~gd~l~~~~~~~--~~-~v~~~~~-~~~~g~~vl~g~a 301 (310)
.-++||-..++++-........ .+....-..++++|.+|+.+||+|.++.++. ++ ...+++. .+++|+++.++++
T Consensus 30 ~g~~HGG~i~al~D~~~~~~~~~~~~~~~t~~~~i~f~rp~~~G~~l~~~a~v~~~g~~~~~~~~~i~~~~~~~va~~~~ 109 (114)
T TIGR02286 30 HGTAHGGFLFSLADSAFAYACNSYGDAAVAAQCTIDFLRPGRAGERLEAEAVEVSRGGRTGTYDVEVVNQEGELVALFRG 109 (114)
T ss_pred CCCchHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEcCCCCEEEEEEE
Confidence 4689999999888755432221 1221223567999999999999999998873 33 3444554 3688999988888
Q ss_pred EEE
Q 021623 302 DVH 304 (310)
Q Consensus 302 ~v~ 304 (310)
++.
T Consensus 110 t~~ 112 (114)
T TIGR02286 110 TSR 112 (114)
T ss_pred EEE
Confidence 775
No 52
>cd03440 hot_dog The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated proteins also share the hotdog fold. These proteins have related, but distinct, catalytic activities that include metabolic roles such as thioester hydrolysis in fatty acid metabolism, and degradation of phenylacetic acid and the environmental pollutant 4-chlorobenzoate. This superfamily also includes the PaaI-like protein FapR, a non-catalytic bacterial homolog involved in transcriptional regulation of fatty acid biosynthesis.
Probab=97.35 E-value=0.0064 Score=43.12 Aligned_cols=78 Identities=26% Similarity=0.257 Sum_probs=57.9
Q ss_pred CCceechHHHHHHHHHHHHHHhhc----CCCceEEEEEEEECcCCCCCCEEEEEEEEEC---cEEEEEEEE-ecCCcEEE
Q 021623 226 SRPILHGLCTMGFAVRAIIKFICR----GDPNMVKNIFSRFLLHVYPGETLVTEMWLQG---LRVIYQVKV-KERNRSAL 297 (310)
Q Consensus 226 ~~~i~hG~~~~~~~~~~~~~~~~~----g~~~~~~~~~~rf~~Pv~~gd~l~~~~~~~~---~~v~~~~~~-~~~g~~vl 297 (310)
...++||.....++.......+.. +....+.+++++|.+|+++||.+.++.++.+ ..+.+++.. +++|+++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (100)
T cd03440 14 GGGIVHGGLLLALADEAAGAAAARLGGRGLGAVTLSLDVRFLRPVRPGDTLTVEAEVVRVGRSSVTVEVEVRNEDGKLVA 93 (100)
T ss_pred cCCccchHHHHHHHHHHHHHHHHHhccCCCeEEEEEEEeEEecCCCCCCEEEEEEEEEeccccEEEEEEEEECCCCCEEE
Confidence 467899999998888777665532 2345667889999999999999999999843 345566553 45688888
Q ss_pred EEEEEE
Q 021623 298 SGFVDV 303 (310)
Q Consensus 298 ~g~a~v 303 (310)
.+..+.
T Consensus 94 ~~~~~~ 99 (100)
T cd03440 94 TATATF 99 (100)
T ss_pred EEEEEe
Confidence 886653
No 53
>PF03061 4HBT: Thioesterase superfamily; InterPro: IPR006683 This family contains a wide variety of enzymes, principally thioesterases. This family includes 4HBT (3.1.2.23 from EC) which catalyses the final step in the biosynthesis of 4-hydroxybenzoate from 4-chlorobenzoate in the soil dwelling microbe Pseudomonas CBS-3. This family includes various cytosolic long-chain acyl-CoA thioester hydrolases. Long-chain acyl-CoA hydrolases hydrolyse palmitoyl-CoA to CoA and palmitate, they also catalyse the hydrolysis of other long chain fatty acyl-CoA thioesters. ; PDB: 3F5O_F 2F0X_D 2H4U_C 2PRX_A 2OV9_D 1YLI_B 3BJK_F 1IXL_A 3DKZ_B 2EIS_B ....
Probab=96.83 E-value=0.017 Score=41.05 Aligned_cols=68 Identities=24% Similarity=0.238 Sum_probs=45.1
Q ss_pred eechHHHHHHHHHHHHHHh---hcC-CCceEEEEEEEECcCCCCCCEEEEEEEEE---CcEEEEEEEE-ecCCcEE
Q 021623 229 ILHGLCTMGFAVRAIIKFI---CRG-DPNMVKNIFSRFLLHVYPGETLVTEMWLQ---GLRVIYQVKV-KERNRSA 296 (310)
Q Consensus 229 i~hG~~~~~~~~~~~~~~~---~~g-~~~~~~~~~~rf~~Pv~~gd~l~~~~~~~---~~~v~~~~~~-~~~g~~v 296 (310)
++||-..++++-.+....+ .+. .......++++|.+|+.+||+|+++.++. +..+.+++.+ +++++.|
T Consensus 3 ~v~~g~~~~~~d~a~~~~~~~~~~~~~~~~~~~~~i~f~~p~~~gd~l~~~~~v~~~g~~~~~~~~~v~~~~~~~~ 78 (79)
T PF03061_consen 3 IVHGGVYLSLFDEAASAALRSHGGDGRGVVTVELSIDFLRPVRPGDTLRVEARVVRVGRKSFTVEVEVYSEDGRLC 78 (79)
T ss_dssp SBCHHHHHHHHHHHHHHHHHHHHSSTEEEEEEEEEEEESS-BBTTSEEEEEEEEEEEESSEEEEEEEEEETTSCEE
T ss_pred EEhHHHHHHHHHHHHHHHHHHhccCCcceEEEEEEEEEccccCCCeEEEEEEEEEEECCEEEEEEEEEEECCCcEE
Confidence 5788777777764443322 121 23345778999999999999999999873 3466666663 5666654
No 54
>cd03443 PaaI_thioesterase PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).
Probab=96.58 E-value=0.054 Score=41.30 Aligned_cols=76 Identities=16% Similarity=0.088 Sum_probs=53.8
Q ss_pred ceechHHHHHHHHHHHHHHh---h-cCCCceEEEEEEEECcCCCCCCEEEEEEEEE--Cc-EEEEEEEE-ecCCcEEEEE
Q 021623 228 PILHGLCTMGFAVRAIIKFI---C-RGDPNMVKNIFSRFLLHVYPGETLVTEMWLQ--GL-RVIYQVKV-KERNRSALSG 299 (310)
Q Consensus 228 ~i~hG~~~~~~~~~~~~~~~---~-~g~~~~~~~~~~rf~~Pv~~gd~l~~~~~~~--~~-~v~~~~~~-~~~g~~vl~g 299 (310)
-++||-..++++........ . ++......+++++|.+|+.. +.+.++.++. ++ .+.+++.. +++|+++.+|
T Consensus 29 g~vhgg~l~~l~d~a~~~~~~~~~~~~~~~~~~~~~i~f~~p~~~-~~v~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~a 107 (113)
T cd03443 29 GIVHGGAIATLADTAGGLAALSALPPGALAVTVDLNVNYLRPARG-GDLTARARVVKLGRRLAVVEVEVTDEDGKLVATA 107 (113)
T ss_pred CeEeHHHHHHHHHHHHHHHHhhccCCCCceEEEEEEEeEEcCCCC-CeEEEEEEEEecCceEEEEEEEEECCCCCEEEEE
Confidence 47888888888765544222 1 13344557889999999999 9999998873 33 46666664 4458999999
Q ss_pred EEEEE
Q 021623 300 FVDVH 304 (310)
Q Consensus 300 ~a~v~ 304 (310)
++++.
T Consensus 108 ~~~~~ 112 (113)
T cd03443 108 RGTFA 112 (113)
T ss_pred EEEEe
Confidence 88764
No 55
>PRK00006 fabZ (3R)-hydroxymyristoyl-ACP dehydratase; Reviewed
Probab=96.57 E-value=0.021 Score=46.46 Aligned_cols=57 Identities=12% Similarity=0.197 Sum_probs=45.0
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEe
Q 021623 94 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLR 156 (310)
Q Consensus 94 ~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~r 156 (310)
.+-+-++++|++|+++||+|++++++.... +| ++.++.++. ++|+.|++.+..++++
T Consensus 89 ~l~gi~~~kF~~pv~pGd~l~i~~~i~~~~---~~-~v~~~~~~~--~~g~~v~~~~~~~~~~ 145 (147)
T PRK00006 89 YFAGIDKARFKRPVVPGDQLILEVELLKQR---RG-IWKFKGVAT--VDGKLVAEAELMFAIR 145 (147)
T ss_pred EEeeeeEEEEccccCCCCEEEEEEEEEEee---CC-EEEEEEEEE--ECCEEEEEEEEEEEEE
Confidence 455568999999999999999999987663 23 456666653 5899999999998875
No 56
>cd01289 FabA_like Domain of unknown function, appears to be related to a diverse group of beta-hydroxydecanoyl ACP dehydratases (FabA) and beta-hydroxyacyl ACP dehydratases (FabZ). This group appears to lack the conserved active site histidine of FabA and FabZ.
Probab=96.56 E-value=0.053 Score=43.74 Aligned_cols=54 Identities=13% Similarity=0.122 Sum_probs=43.4
Q ss_pred eEEEE-EEEECcCCCC-CCEEEEEEEE---EC-cEEEEEEEEecCCcEEEEEEEEEEecc
Q 021623 254 MVKNI-FSRFLLHVYP-GETLVTEMWL---QG-LRVIYQVKVKERNRSALSGFVDVHRLA 307 (310)
Q Consensus 254 ~~~~~-~~rf~~Pv~~-gd~l~~~~~~---~~-~~v~~~~~~~~~g~~vl~g~a~v~~p~ 307 (310)
-+.++ +++|++|+++ ||+|++.++. .+ +...|++....+|+++.+|+.++..|.
T Consensus 79 ~l~~i~~~~f~~~v~p~Gd~l~i~~~~~~~~~~~~~~~~~~~~v~~~~va~a~l~~~~p~ 138 (138)
T cd01289 79 FLLGSRKYEAHVDRFDLGSTLLIVVAELLQGDSGLGVFECTIEDQGGVLASGRLNVYQPA 138 (138)
T ss_pred EEEEEEEEEEEcceeCCCCeeEEEeeeeeeCCCcEEEEEEEEEECCEEEEEEEEEEEcCC
Confidence 45565 7999999998 9999998765 33 667787776567899999999998874
No 57
>cd03445 Thioesterase_II_repeat2 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=96.43 E-value=0.082 Score=39.63 Aligned_cols=77 Identities=14% Similarity=0.138 Sum_probs=59.0
Q ss_pred CCceechHHHHHHHHHHHHHHhhcCCCceEEEEEEEECcCCCCCCEEEEEEEE--ECc-EEEEEEEEecCCcEEEEEEEE
Q 021623 226 SRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWL--QGL-RVIYQVKVKERNRSALSGFVD 302 (310)
Q Consensus 226 ~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~Pv~~gd~l~~~~~~--~~~-~v~~~~~~~~~g~~vl~g~a~ 302 (310)
.+..++|-++++.+..+..... .+...+.++.+.|.+|..++..+.++++. +|. ....++...|+|++++++.+.
T Consensus 14 ~~~~~~GG~l~a~a~~Aa~~~~--~~~~~~~s~~~~Fl~p~~~~~pv~~~v~~lr~GRs~~~~~V~~~Q~g~~~~~a~~s 91 (94)
T cd03445 14 QGRGVFGGQVLAQALVAAARTV--PDDRVPHSLHSYFLRPGDPDQPIEYEVERLRDGRSFATRRVRAVQNGKVIFTATAS 91 (94)
T ss_pred CCCceEHHHHHHHHHHHHHhhC--CCCCCeEEEEEEecCCCCCCCCEEEEEEEEECCCcEEEEEEEEEECCEEEEEEEEE
Confidence 5678899999999887776653 23356789999999999999999988886 333 334455556889999998887
Q ss_pred EE
Q 021623 303 VH 304 (310)
Q Consensus 303 v~ 304 (310)
+.
T Consensus 92 f~ 93 (94)
T cd03445 92 FQ 93 (94)
T ss_pred Ee
Confidence 64
No 58
>cd00586 4HBT 4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active sites. There is no evidence to suggest that 4HBT is related to the type I thioesterases functioning in primary or secondary metabolic pathways. Each subunit of the 4HBT tetramer adopts a so-called hot-dog fold similar to those of beta-hydroxydecanoyl-ACP dehydratase, (R)-specific enoyl-CoA hydratase, and type II, thioesterase (TEII).
Probab=96.43 E-value=0.053 Score=40.44 Aligned_cols=58 Identities=17% Similarity=0.236 Sum_probs=44.9
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021623 93 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 155 (310)
Q Consensus 93 ~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 155 (310)
+.+-.+.+++|++|++.||++++++++.++.. ..+.+..+++ +++|+++++..+..+.
T Consensus 51 ~~~~~~~~i~~~~~~~~~~~i~v~~~~~~~~~----~~~~~~~~~~-~~~g~~~a~~~~~~~~ 108 (110)
T cd00586 51 GLVVVELEIDYLRPLRLGDRLTVETRVLRLGR----KSFTFEQEIF-REDGELLATAETVLVC 108 (110)
T ss_pred eEEEEEeEeeEcCccCCCCEEEEEEEEEecCc----EEEEEEEEEE-CCCCeEEEEEEEEEEE
Confidence 45668899999999999999999999998732 2234555544 4479999999987764
No 59
>TIGR02286 PaaD phenylacetic acid degradation protein PaaD. Sequences scoring between trusted and noise include those from archaea and other species not known to catabolize phenylacetic acid and which are not adjacent to other genes potentially involved with such a pathway.
Probab=96.39 E-value=0.046 Score=42.36 Aligned_cols=56 Identities=18% Similarity=0.246 Sum_probs=42.8
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEE
Q 021623 94 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 154 (310)
Q Consensus 94 ~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~ 154 (310)
.+-.+.++.|++|++.||++.+++++.. +++ ....++.+++ +++|+++++.+.++.
T Consensus 57 ~~t~~~~i~f~rp~~~G~~l~~~a~v~~---~g~-~~~~~~~~i~-~~~~~~va~~~~t~~ 112 (114)
T TIGR02286 57 AVAAQCTIDFLRPGRAGERLEAEAVEVS---RGG-RTGTYDVEVV-NQEGELVALFRGTSR 112 (114)
T ss_pred eEEEEEEEEEecCCCCCCEEEEEEEEEE---eCC-cEEEEEEEEE-cCCCCEEEEEEEEEE
Confidence 3567889999999999999999999883 222 2235555654 689999999998864
No 60
>PF07977 FabA: FabA-like domain; InterPro: IPR013114 Fatty acids biosynthesis occurs by two distinct pathways: in fungi, mammals and mycobacteria, type I or associative fatty-acid biosynthesis (type I FAS) is accomplished by multifunctional proteins in which distinct domains catalyse specific reactions; in plants and most bacteria, type II or dissociative fatty-acid biosynthesis (type II FAS) is accomplished by distinct enzymes []. Both FabZ and FabA catalyse the dehydration of beta-hydroxyacyl acyl carrier protein (ACP) to trans 2-enoyl ACP. However, FabZ and FabA display subtle differences in substrate specificities, whereby FabA is most effective on acyl ACPs of 9-11 carbon atoms in length, while FabZ is less specific. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains. This enzyme domain has a HotDog fold.; PDB: 3D6X_F 2GLV_J 2GLM_E 2GLP_E 2GLL_C 1U1Z_F 3ESI_A 3AZB_T 3AZA_M 3AZ9_U ....
Probab=96.28 E-value=0.073 Score=42.73 Aligned_cols=75 Identities=16% Similarity=0.182 Sum_probs=41.2
Q ss_pred CCceechHHHHHHHH---HHHHHHhhc--CCC-----ceEE-EEEEEECcCCCCCC-EEEEEEEEEC------cEEEEEE
Q 021623 226 SRPILHGLCTMGFAV---RAIIKFICR--GDP-----NMVK-NIFSRFLLHVYPGE-TLVTEMWLQG------LRVIYQV 287 (310)
Q Consensus 226 ~~~i~hG~~~~~~~~---~~~~~~~~~--g~~-----~~~~-~~~~rf~~Pv~~gd-~l~~~~~~~~------~~v~~~~ 287 (310)
..+|++|.+..-.+. ..+..+... ... ..+. .-+++|.+||+||| +|++++.... +.+.++.
T Consensus 46 ~~Pv~PGvl~iE~~aQ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~kF~~~v~Pg~~~l~~~v~i~~~~~~~~~~~~~~~ 125 (138)
T PF07977_consen 46 GDPVMPGVLLIEAMAQAAGFLAGYSGLAEGTGEARKVPFLAGIRNVKFRGPVYPGDKTLRIEVEIKKIRRREGGMAIFDG 125 (138)
T ss_dssp TS--B-HHHHHHHHHHHHHHHHHHHCCSSSCCCCCEEEEEEEEEEEEE-S-B-TTE-EEEEEEEEEEEEEEETTEEEEEE
T ss_pred CCCCCCeEhHHHHHHHHHHhHhhhccccccCCCcceEEEeccccEEEECccEeCCCcEEEEEEEEEEeecccCCEEEEEE
Confidence 458999977763333 333333211 111 1123 34799999999999 8888776532 4667776
Q ss_pred EEecCCcEEEEEE
Q 021623 288 KVKERNRSALSGF 300 (310)
Q Consensus 288 ~~~~~g~~vl~g~ 300 (310)
....+|+.+.+++
T Consensus 126 ~~~vdg~~v~~~~ 138 (138)
T PF07977_consen 126 TAYVDGELVAEAE 138 (138)
T ss_dssp EEEETTEEEEEEE
T ss_pred EEEECCEEEEEEC
Confidence 6556788887753
No 61
>cd03440 hot_dog The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated proteins also share the hotdog fold. These proteins have related, but distinct, catalytic activities that include metabolic roles such as thioester hydrolysis in fatty acid metabolism, and degradation of phenylacetic acid and the environmental pollutant 4-chlorobenzoate. This superfamily also includes the PaaI-like protein FapR, a non-catalytic bacterial homolog involved in transcriptional regulation of fatty acid biosynthesis.
Probab=96.10 E-value=0.081 Score=37.17 Aligned_cols=58 Identities=14% Similarity=0.152 Sum_probs=45.0
Q ss_pred CceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEE
Q 021623 91 PRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTA 153 (310)
Q Consensus 91 ~~~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~ 153 (310)
-...+.++.++.|++|++.||.+..+.++.+...+ .+.++.... +++|+++++...++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~ 99 (100)
T cd03440 42 GLGAVTLSLDVRFLRPVRPGDTLTVEAEVVRVGRS----SVTVEVEVR-NEDGKLVATATATF 99 (100)
T ss_pred CCeEEEEEEEeEEecCCCCCCEEEEEEEEEecccc----EEEEEEEEE-CCCCCEEEEEEEEe
Confidence 34578889999999999999999999999888554 345555543 56799998876653
No 62
>TIGR01749 fabA beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA. This enzyme, FabA, shows overlapping substrate specificity with FabZ with regard to chain length in fatty acid biosynthesis. It is commonly designated 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) as if it were specific for that chain length, but its specificity is broader; it is active even in the initiation of fatty acid biosynthesis. This enzyme can also isomerize trans-2-decenoyl-ACP to cis-3-decenoyl-ACP to bypass reduction by FabI and instead allow biosynthesis of unsaturated fatty acids. FabA cannot elongate unsaturated fatty acids.
Probab=96.03 E-value=0.12 Score=43.26 Aligned_cols=85 Identities=14% Similarity=0.081 Sum_probs=54.9
Q ss_pred CCCceechHHHHHHHHHHHHHHhh--cCC-CceEEE-EEEEECcCCCCCCEE-EEEEEEE------CcEEEEEEEEecCC
Q 021623 225 FSRPILHGLCTMGFAVRAIIKFIC--RGD-PNMVKN-IFSRFLLHVYPGETL-VTEMWLQ------GLRVIYQVKVKERN 293 (310)
Q Consensus 225 f~~~i~hG~~~~~~~~~~~~~~~~--~g~-~~~~~~-~~~rf~~Pv~~gd~l-~~~~~~~------~~~v~~~~~~~~~g 293 (310)
...++++|.+..=.+++.+.-+.. ... ...+.+ -+++|++||+|||++ ++++.+. ++.+.+++..--+|
T Consensus 70 p~~PvmPG~L~iEamAQ~~~~~~~~~~~~~~g~l~gi~~~kfr~~v~Pgd~~~~l~v~i~~~~~~~~~~~~~~~~i~v~g 149 (169)
T TIGR01749 70 IGDPVMPGCLGLDAMWQLVGFFLGWLGGPGRGRALGVGEVKFTGQVLPTAKKVTYRIHFKRVINRRLVMGIADGEVLVDG 149 (169)
T ss_pred CCCCcCchHHHHHHHHHHHHHHHhccccCCceEEeeccEEEEccCEecCCeEEEEEEEEEEEeecCCcEEEEEEEEEECC
Confidence 356888887766555544432221 111 123333 389999999999996 6665541 34677777755678
Q ss_pred cEEEE---EEEEEEeccCC
Q 021623 294 RSALS---GFVDVHRLASS 309 (310)
Q Consensus 294 ~~vl~---g~a~v~~p~~~ 309 (310)
+++.+ +.+.+-+|.+.
T Consensus 150 ~~va~a~~~~~~~~~~~~~ 168 (169)
T TIGR01749 150 RLIYTASDLRVGLFTSTSA 168 (169)
T ss_pred EEEEEEECCEEEEecCCCC
Confidence 88888 66777788764
No 63
>cd00586 4HBT 4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active sites. There is no evidence to suggest that 4HBT is related to the type I thioesterases functioning in primary or secondary metabolic pathways. Each subunit of the 4HBT tetramer adopts a so-called hot-dog fold similar to those of beta-hydroxydecanoyl-ACP dehydratase, (R)-specific enoyl-CoA hydratase, and type II, thioesterase (TEII).
Probab=96.02 E-value=0.21 Score=37.11 Aligned_cols=52 Identities=12% Similarity=0.126 Sum_probs=39.0
Q ss_pred ceEEEEEEEECcCCCCCCEEEEEEEEEC---cEEEEEEEE-ecCCcEEEEEEEEEE
Q 021623 253 NMVKNIFSRFLLHVYPGETLVTEMWLQG---LRVIYQVKV-KERNRSALSGFVDVH 304 (310)
Q Consensus 253 ~~~~~~~~rf~~Pv~~gd~l~~~~~~~~---~~v~~~~~~-~~~g~~vl~g~a~v~ 304 (310)
..+..++++|.+|+++||+|.++.++.+ ..+.+.... +++|+++.+|..+..
T Consensus 52 ~~~~~~~i~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~g~~~a~~~~~~~ 107 (110)
T cd00586 52 LVVVELEIDYLRPLRLGDRLTVETRVLRLGRKSFTFEQEIFREDGELLATAETVLV 107 (110)
T ss_pred EEEEEeEeeEcCccCCCCEEEEEEEEEecCcEEEEEEEEEECCCCeEEEEEEEEEE
Confidence 3457789999999999999999999743 344455543 346899999887653
No 64
>PRK10800 acyl-CoA thioesterase YbgC; Provisional
Probab=95.96 E-value=0.17 Score=40.01 Aligned_cols=61 Identities=13% Similarity=0.160 Sum_probs=48.0
Q ss_pred ceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEec
Q 021623 92 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRG 157 (310)
Q Consensus 92 ~~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg 157 (310)
.+.+=.+.+++|++|+..||+|++++.+..+..+ -+++..+++ +++|+++++..++.+.-.
T Consensus 52 ~~~~v~~~~i~y~~~~~~~d~i~v~t~v~~~~~~----s~~~~~~i~-~~~g~~~a~~~~~~v~~d 112 (130)
T PRK10800 52 VAFVVRKMTVEYYAPARLDDMLEVQSEITSMRGT----SLTFTQRIV-NAEGTLLNEAEVLIVCVD 112 (130)
T ss_pred CEEEEEEEEEEEcCcccCCCEEEEEEEEEeeCcE----EEEEEEEEE-cCCCeEEEEEEEEEEEEE
Confidence 3456668999999999999999999999988632 244555544 568999999999988764
No 65
>TIGR00369 unchar_dom_1 uncharacterized domain 1. Most proteins containing this domain consist almost entirely of a single copy of this domain. A protein from C. elegans consists of two tandem copies of the domain. The domain is also found as the N-terminal region of an apparent initiation factor eIF-2B alpha subunit of Aquifex aeolicus. The function of the domain is unknown.
Probab=95.92 E-value=0.15 Score=39.49 Aligned_cols=76 Identities=14% Similarity=0.064 Sum_probs=50.0
Q ss_pred ceechHHHHHHHHHHH---HHHhh-cCCCceEEEEEEEECcCCCCCCEEEEEEEEE--Cc-EEEEEEEE-ecCCcEEEEE
Q 021623 228 PILHGLCTMGFAVRAI---IKFIC-RGDPNMVKNIFSRFLLHVYPGETLVTEMWLQ--GL-RVIYQVKV-KERNRSALSG 299 (310)
Q Consensus 228 ~i~hG~~~~~~~~~~~---~~~~~-~g~~~~~~~~~~rf~~Pv~~gd~l~~~~~~~--~~-~v~~~~~~-~~~g~~vl~g 299 (310)
-++||-..++++-... ..... .+....-.+++++|.+|+..| .|+++.++. ++ ...++++. +++|++|.++
T Consensus 33 g~vhGG~l~~l~D~a~~~a~~~~~~~~~~~vt~~l~i~f~~p~~~g-~l~a~a~v~~~gr~~~~~~~~i~~~~g~~va~~ 111 (117)
T TIGR00369 33 GSLHGGVSAALADTAGSAAGYLCNSGGQAVVGLELNANHLRPAREG-KVRAIAQVVHLGRQTGVAEIEIVDEQGRLCALS 111 (117)
T ss_pred ccChHHHHHHHHHHHHHHHHHhhcCCCceEEEEEEEeeeccccCCC-EEEEEEEEEecCceEEEEEEEEECCCCCEEEEE
Confidence 4788888888765333 11111 111222256899999999999 899988763 33 34556653 6789999999
Q ss_pred EEEEE
Q 021623 300 FVDVH 304 (310)
Q Consensus 300 ~a~v~ 304 (310)
+++..
T Consensus 112 ~~t~~ 116 (117)
T TIGR00369 112 RGTTA 116 (117)
T ss_pred EEEEc
Confidence 88763
No 66
>PRK04424 fatty acid biosynthesis transcriptional regulator; Provisional
Probab=95.80 E-value=0.052 Score=46.13 Aligned_cols=56 Identities=20% Similarity=0.318 Sum_probs=42.6
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021623 94 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 155 (310)
Q Consensus 94 ~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 155 (310)
.+=+.++++|.+|+.+||+|++++++.... ++ +..+....+ ++|++|++...+++.
T Consensus 126 ~~~~i~~irF~kPV~pGD~L~~ea~v~~~~--~~--~~~v~~~~~--v~g~~V~ege~~~~~ 181 (185)
T PRK04424 126 ALTGVANIRFKRPVKLGERVVAKAEVVRKK--GN--KYIVEVKSY--VGDELVFRGKFIMYR 181 (185)
T ss_pred EEEEeeeEEEccCCCCCCEEEEEEEEEEcc--CC--EEEEEEEEE--ECCEEEEEEEEEEEE
Confidence 455678999999999999999999999432 22 234444432 579999999998865
No 67
>PRK05174 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; Validated
Probab=95.75 E-value=0.25 Score=41.47 Aligned_cols=84 Identities=13% Similarity=0.107 Sum_probs=54.9
Q ss_pred CCceechHHHHHHHHHHHHHHhh--cCC-CceEEE-EEEEECcCCCCCCE-EEEEEEEE------CcEEEEEEEEecCCc
Q 021623 226 SRPILHGLCTMGFAVRAIIKFIC--RGD-PNMVKN-IFSRFLLHVYPGET-LVTEMWLQ------GLRVIYQVKVKERNR 294 (310)
Q Consensus 226 ~~~i~hG~~~~~~~~~~~~~~~~--~g~-~~~~~~-~~~rf~~Pv~~gd~-l~~~~~~~------~~~v~~~~~~~~~g~ 294 (310)
+.++++|.+..=.+++.+.-+.. ... ...+.+ -+++|+++|+|||+ +++++.+. ++.+.+++..--+|+
T Consensus 74 ~~PvmPG~L~iEamAQ~~~~~~~~~~~~~~g~l~g~~~~kfr~~v~Pgd~~l~l~v~i~~~~~~~~~~~~~~~~i~v~g~ 153 (172)
T PRK05174 74 GDPVMPGCLGLDAMWQLVGFYLGWLGGPGKGRALGVGEVKFTGQVLPTAKKVTYEIDIKRVINRKLVMGIADGRVLVDGE 153 (172)
T ss_pred CCCcCchHHHHHHHHHHHHHHHhcccccCceEEeeccEEEECccCcCCCEEEEEEEEEEEEecCCCCEEEEEEEEEECCE
Confidence 46888887666555544332221 111 112333 47999999999998 77776652 246777776555789
Q ss_pred EEEEE---EEEEEeccCC
Q 021623 295 SALSG---FVDVHRLASS 309 (310)
Q Consensus 295 ~vl~g---~a~v~~p~~~ 309 (310)
++.++ .+.+-+|.+.
T Consensus 154 ~va~a~~~~l~~~~~~~~ 171 (172)
T PRK05174 154 EIYTAKDLKVGLFKDTSA 171 (172)
T ss_pred EEEEEEeeEEEEeccCCC
Confidence 99998 6777788764
No 68
>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B.
Probab=95.56 E-value=0.25 Score=43.71 Aligned_cols=79 Identities=15% Similarity=0.115 Sum_probs=56.1
Q ss_pred CceechHHHHHHHHHHHHHHhhcCCCceEEEEEEEECcCCCCCCEEEEEEEE--ECc-EEEEEEEEecCCcEEEEEEEEE
Q 021623 227 RPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWL--QGL-RVIYQVKVKERNRSALSGFVDV 303 (310)
Q Consensus 227 ~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~Pv~~gd~l~~~~~~--~~~-~v~~~~~~~~~g~~vl~g~a~v 303 (310)
+..+||-++++.+..++.... .++...+.++.+.|.+|+.+| .+.++++. .|. ....+++.-|+|+.++++++.+
T Consensus 9 g~~~~GG~~a~~~~~A~~~~~-~~~~~~~~s~~~~fl~p~~~~-~~~~~v~~~r~Gr~~~~~~v~~~q~~~~~~~a~~~f 86 (255)
T PF13622_consen 9 GRVVHGGYLAQLLAAAARTHA-PPPGFDPHSLHVYFLRPVPPG-PVEYRVEVLRDGRSFSTRQVELSQDGKVVATATASF 86 (255)
T ss_dssp TTCE-HHHHHHHHHHHHHHCH-TTTSSEEEEEEEEESS--BSC-EEEEEEEEEEESSSEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCcChhHHHHHHHHHHHHHhc-cCCCCceEEEEeEeccccccC-CEEEEEEEeeCCCcEEEEEEEEEECCcCEEEEEEEE
Confidence 567888888888877766442 233457899999999999999 99998886 343 4455666678999999999988
Q ss_pred Eecc
Q 021623 304 HRLA 307 (310)
Q Consensus 304 ~~p~ 307 (310)
..+.
T Consensus 87 ~~~~ 90 (255)
T PF13622_consen 87 GRPE 90 (255)
T ss_dssp E--T
T ss_pred ccCc
Confidence 7655
No 69
>COG0764 FabA 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism]
Probab=95.55 E-value=0.31 Score=39.75 Aligned_cols=79 Identities=13% Similarity=0.061 Sum_probs=47.9
Q ss_pred CceechHHHHHHHH---HHHHHHhhcCC--CceEEE-EEEEECcCCCCCCEEEEEEEEE----CcEEEEEEEEecCCcEE
Q 021623 227 RPILHGLCTMGFAV---RAIIKFICRGD--PNMVKN-IFSRFLLHVYPGETLVTEMWLQ----GLRVIYQVKVKERNRSA 296 (310)
Q Consensus 227 ~~i~hG~~~~~~~~---~~~~~~~~~g~--~~~~~~-~~~rf~~Pv~~gd~l~~~~~~~----~~~v~~~~~~~~~g~~v 296 (310)
.+|.+|.+..-.++ ..+..+..... -..+.+ .++||++||.|||.+.++++.. .+...+..+..-+|+++
T Consensus 55 ~PimPGVLileamaQ~~g~~~~~~~~~~~~~~~~~gid~~kF~~~V~PGd~l~l~~~~~~~~~~~~~~~~~~a~Vdg~~v 134 (147)
T COG0764 55 DPIMPGVLILEAMAQAAGFLLGWLLGNKGKLGYFLGIDNAKFKRPVLPGDQLELEVKLLKSRRLGIGKAKGVATVDGKVV 134 (147)
T ss_pred CCCcchhHHHHHHHHHHHHHHhccccCCccEEEEEEecceeecCccCCCCEEEEEEEEEEecccceEEEEEEEEECCEEE
Confidence 47777765544332 33333322111 112334 4799999999999999988863 23344555544578888
Q ss_pred EEEEEEEEe
Q 021623 297 LSGFVDVHR 305 (310)
Q Consensus 297 l~g~a~v~~ 305 (310)
.+++.....
T Consensus 135 ~~a~~~~~~ 143 (147)
T COG0764 135 AEAELLFAG 143 (147)
T ss_pred EEEEEEEEE
Confidence 888776553
No 70
>PF03061 4HBT: Thioesterase superfamily; InterPro: IPR006683 This family contains a wide variety of enzymes, principally thioesterases. This family includes 4HBT (3.1.2.23 from EC) which catalyses the final step in the biosynthesis of 4-hydroxybenzoate from 4-chlorobenzoate in the soil dwelling microbe Pseudomonas CBS-3. This family includes various cytosolic long-chain acyl-CoA thioester hydrolases. Long-chain acyl-CoA hydrolases hydrolyse palmitoyl-CoA to CoA and palmitate, they also catalyse the hydrolysis of other long chain fatty acyl-CoA thioesters. ; PDB: 3F5O_F 2F0X_D 2H4U_C 2PRX_A 2OV9_D 1YLI_B 3BJK_F 1IXL_A 3DKZ_B 2EIS_B ....
Probab=95.51 E-value=0.088 Score=37.21 Aligned_cols=50 Identities=20% Similarity=0.382 Sum_probs=37.8
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEE
Q 021623 93 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLC 147 (310)
Q Consensus 93 ~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~ 147 (310)
..+=.+.++.|++|++.||.+++++++..+..+ .+.++.+++ +++++++|
T Consensus 30 ~~~~~~~~i~f~~p~~~gd~l~~~~~v~~~g~~----~~~~~~~v~-~~~~~~~~ 79 (79)
T PF03061_consen 30 GVVTVELSIDFLRPVRPGDTLRVEARVVRVGRK----SFTVEVEVY-SEDGRLCA 79 (79)
T ss_dssp EEEEEEEEEEESS-BBTTSEEEEEEEEEEEESS----EEEEEEEEE-ETTSCEEE
T ss_pred ceEEEEEEEEEccccCCCeEEEEEEEEEEECCE----EEEEEEEEE-ECCCcEEC
Confidence 456678999999999999999999999887644 345565654 57777765
No 71
>cd03442 BFIT_BACH Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, and brown adipose tissues. The archeal and eukaryotic members of this family have two tandem copies of the conserved hot dog fold, while most bacterial members have only one copy.
Probab=95.36 E-value=0.44 Score=36.71 Aligned_cols=78 Identities=17% Similarity=0.141 Sum_probs=46.3
Q ss_pred eechHHHHHHHHHHHHHHh--hcCCCceEEEE-EEEECcCCCCCCEEEEEEEEE--C-cEEEEEEEE-ec-----CCcEE
Q 021623 229 ILHGLCTMGFAVRAIIKFI--CRGDPNMVKNI-FSRFLLHVYPGETLVTEMWLQ--G-LRVIYQVKV-KE-----RNRSA 296 (310)
Q Consensus 229 i~hG~~~~~~~~~~~~~~~--~~g~~~~~~~~-~~rf~~Pv~~gd~l~~~~~~~--~-~~v~~~~~~-~~-----~g~~v 296 (310)
++||-..+.++-.+..... ..........+ +++|.+|+.+||.|.+++++. + ..+.+++.. ++ +++++
T Consensus 24 ~v~~g~~~~~~d~a~~~~~~~~~~~~~~~~~~~~~~f~~p~~~gd~l~i~~~v~~~g~~~~~~~~~i~~~~~~~~~~~~~ 103 (123)
T cd03442 24 TIFGGWLLEWMDELAGIAAYRHAGGRVVTASVDRIDFLKPVRVGDVVELSARVVYTGRTSMEVGVEVEAEDPLTGERRLV 103 (123)
T ss_pred cEeHHHHHHHHHHHHHHHHHHHhCCcEEEEEECceEEcCccccCcEEEEEEEEEEecCCeEEEEEEEEEecCCCCcEEEE
Confidence 4566555555543322111 11222334456 799999999999999998873 2 345555442 22 24678
Q ss_pred EEEEEEEEec
Q 021623 297 LSGFVDVHRL 306 (310)
Q Consensus 297 l~g~a~v~~p 306 (310)
.+|..+...+
T Consensus 104 a~~~~~~v~~ 113 (123)
T cd03442 104 TSAYFTFVAL 113 (123)
T ss_pred EEEEEEEEEE
Confidence 8888776543
No 72
>cd01288 FabZ FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid biosynthesis pathway.
Probab=95.35 E-value=0.13 Score=40.39 Aligned_cols=56 Identities=16% Similarity=0.189 Sum_probs=42.1
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021623 94 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 155 (310)
Q Consensus 94 ~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 155 (310)
.+-+-++++|++|+++||++++++++..... + .+.++.++ .++|+++++.+..+.+
T Consensus 75 ~l~~~~~~kf~~pv~pgd~l~i~~~v~~~~~--~--~~~~~~~~--~~~g~~v~~~~~~~~~ 130 (131)
T cd01288 75 YFAGIDKARFRKPVVPGDQLILEVELLKLRR--G--IGKFKGKA--YVDGKLVAEAELMFAI 130 (131)
T ss_pred EEeeecccEEccccCCCCEEEEEEEEEEeeC--C--EEEEEEEE--EECCEEEEEEEEEEEE
Confidence 3455599999999999999999999886542 2 34555554 3578999999887654
No 73
>TIGR01750 fabZ beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ. This enzyme, FabZ, shows overlapping substrate specificity with FabA with regard to chain length in fatty acid biosynthesis. FabZ works preferentially on shorter chains and is often designated (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase, although its actual specificity is broader. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains.
Probab=95.33 E-value=0.096 Score=42.06 Aligned_cols=56 Identities=11% Similarity=0.163 Sum_probs=41.8
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEE
Q 021623 93 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 154 (310)
Q Consensus 93 ~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~ 154 (310)
..+-+-++++|++|+++||+|++++++.... .+ ++.++.++ .++|+++++.+..+.
T Consensus 84 ~~l~~~~~~kF~~~v~pGd~l~i~~~i~~~~---~~-~~~~~~~~--~~~g~~va~~~~~~~ 139 (140)
T TIGR01750 84 VYFAGIDKAKFRRPVVPGDQLILHAEFLKKR---RK-IGKFKGEA--TVDGKVVAEAEITFA 139 (140)
T ss_pred EEEeecceeEECCccCCCCEEEEEEEEEEcc---CC-EEEEEEEE--EECCEEEEEEEEEEE
Confidence 3455668999999999999999999987332 22 34555554 368999999988764
No 74
>TIGR00369 unchar_dom_1 uncharacterized domain 1. Most proteins containing this domain consist almost entirely of a single copy of this domain. A protein from C. elegans consists of two tandem copies of the domain. The domain is also found as the N-terminal region of an apparent initiation factor eIF-2B alpha subunit of Aquifex aeolicus. The function of the domain is unknown.
Probab=95.29 E-value=0.16 Score=39.39 Aligned_cols=55 Identities=18% Similarity=0.158 Sum_probs=41.8
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEE
Q 021623 94 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 154 (310)
Q Consensus 94 ~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~ 154 (310)
.+=.+-++.|++|.+.| .|++++++.. ++ +.+..++.+++ +++|++|++.+.++.
T Consensus 62 ~vt~~l~i~f~~p~~~g-~l~a~a~v~~---~g-r~~~~~~~~i~-~~~g~~va~~~~t~~ 116 (117)
T TIGR00369 62 VVGLELNANHLRPAREG-KVRAIAQVVH---LG-RQTGVAEIEIV-DEQGRLCALSRGTTA 116 (117)
T ss_pred EEEEEEEeeeccccCCC-EEEEEEEEEe---cC-ceEEEEEEEEE-CCCCCEEEEEEEEEc
Confidence 45567899999999999 9999998752 23 23455666654 678999999998874
No 75
>PRK10800 acyl-CoA thioesterase YbgC; Provisional
Probab=95.20 E-value=0.17 Score=39.93 Aligned_cols=53 Identities=8% Similarity=0.043 Sum_probs=39.9
Q ss_pred CceEEEEEEEECcCCCCCCEEEEEEEEEC--c-EEEEEEE-EecCCcEEEEEEEEEE
Q 021623 252 PNMVKNIFSRFLLHVYPGETLVTEMWLQG--L-RVIYQVK-VKERNRSALSGFVDVH 304 (310)
Q Consensus 252 ~~~~~~~~~rf~~Pv~~gd~l~~~~~~~~--~-~v~~~~~-~~~~g~~vl~g~a~v~ 304 (310)
...+.+.+++|.+|++.||+|.++.++.. + .+.+..+ .+++|+++.+|..+..
T Consensus 53 ~~~v~~~~i~y~~~~~~~d~i~v~t~v~~~~~~s~~~~~~i~~~~g~~~a~~~~~~v 109 (130)
T PRK10800 53 AFVVRKMTVEYYAPARLDDMLEVQSEITSMRGTSLTFTQRIVNAEGTLLNEAEVLIV 109 (130)
T ss_pred EEEEEEEEEEEcCcccCCCEEEEEEEEEeeCcEEEEEEEEEEcCCCeEEEEEEEEEE
Confidence 34567899999999999999999999843 3 4445444 3668899888877554
No 76
>COG2050 PaaI HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.11 E-value=0.39 Score=38.64 Aligned_cols=80 Identities=23% Similarity=0.196 Sum_probs=51.4
Q ss_pred CCceechHHHHHHHHHHHHHHh-hcCCC-ce--EEEEEEEECcCCCCCCEEEEEEEE--ECcE-EEEEEEE-e-cCCcEE
Q 021623 226 SRPILHGLCTMGFAVRAIIKFI-CRGDP-NM--VKNIFSRFLLHVYPGETLVTEMWL--QGLR-VIYQVKV-K-ERNRSA 296 (310)
Q Consensus 226 ~~~i~hG~~~~~~~~~~~~~~~-~~g~~-~~--~~~~~~rf~~Pv~~gd~l~~~~~~--~~~~-v~~~~~~-~-~~g~~v 296 (310)
+.-++||-+.++++-....-.. ...+. .. =..++++|.+|+..|+ +++..++ .|.. ...++.+ + ++++++
T Consensus 49 ~~G~~HGG~i~alaD~a~~~a~~~~~~~~~~~~ti~l~i~flr~~~~g~-v~a~a~v~~~G~~~~v~~i~v~~~~~~~lv 127 (141)
T COG2050 49 PGGILHGGVIAALADSAAGLAANSLLGVVALAVTLELNINFLRPVKEGD-VTAEARVLHLGRRVAVVEIEVKNDEGGRLV 127 (141)
T ss_pred CCceeeHHHHHHHHHHHHHHHHhhccCccceeEEEEEEehhccCCCCCe-EEEEEEEEeeCCEEEEEEEEEEECCCCeEE
Confidence 5679999999988753332211 11111 11 1367899999999999 8888876 3433 3344443 3 445899
Q ss_pred EEEEEEEEec
Q 021623 297 LSGFVDVHRL 306 (310)
Q Consensus 297 l~g~a~v~~p 306 (310)
..++.+....
T Consensus 128 a~~~~t~~v~ 137 (141)
T COG2050 128 AKGTGTYAVL 137 (141)
T ss_pred EEEEEEEEEe
Confidence 9888877654
No 77
>PRK11688 hypothetical protein; Provisional
Probab=94.98 E-value=0.28 Score=40.20 Aligned_cols=57 Identities=11% Similarity=0.093 Sum_probs=43.5
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021623 93 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 155 (310)
Q Consensus 93 ~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 155 (310)
..+=.+-++.|++|.+ |+.|++++++.. +++ .+..++.+++ +++|+++++.+.++++
T Consensus 97 ~~vTi~l~i~fl~p~~-g~~l~a~a~v~~---~g~-r~~~~~~~i~-~~~g~lvA~a~~t~~v 153 (154)
T PRK11688 97 RLGTIDLRVDYLRPGR-GERFTATSSVLR---AGN-KVAVARMELH-NEQGVHIASGTATYLV 153 (154)
T ss_pred cceEEEEEEEeeccCC-CCeEEEEEEEEE---ccC-CEEEEEEEEE-CCCCCEEEEEEEEEEe
Confidence 3456788999999995 999999999873 232 2345666654 6789999999999875
No 78
>PRK11688 hypothetical protein; Provisional
Probab=94.96 E-value=0.5 Score=38.74 Aligned_cols=78 Identities=17% Similarity=0.080 Sum_probs=51.4
Q ss_pred CCceechHHHHHHHHHHHHHHhh---c-C--C-----------CceEEEEEEEECcCCCCCCEEEEEEEEE--Cc-EEEE
Q 021623 226 SRPILHGLCTMGFAVRAIIKFIC---R-G--D-----------PNMVKNIFSRFLLHVYPGETLVTEMWLQ--GL-RVIY 285 (310)
Q Consensus 226 ~~~i~hG~~~~~~~~~~~~~~~~---~-g--~-----------~~~~~~~~~rf~~Pv~~gd~l~~~~~~~--~~-~v~~ 285 (310)
+.-++||-..++++-....-... . + . ...=..++++|.+|+. |+.|++++++. ++ .+.+
T Consensus 54 ~~G~vHGG~i~tl~D~a~g~a~~~~~~~~~~~~~~~~~~~~~~~~vTi~l~i~fl~p~~-g~~l~a~a~v~~~g~r~~~~ 132 (154)
T PRK11688 54 AQSILHGGVIASVLDVAGGLVCVGGILARHEDISEEELRQRLSRLGTIDLRVDYLRPGR-GERFTATSSVLRAGNKVAVA 132 (154)
T ss_pred CcCeeeHHHHHHHHHHHHHHHHHhhcccccccccccccccccccceEEEEEEEeeccCC-CCeEEEEEEEEEccCCEEEE
Confidence 34689998888877533321111 0 0 0 0012478899999995 99999998873 33 3455
Q ss_pred EEEE-ecCCcEEEEEEEEEE
Q 021623 286 QVKV-KERNRSALSGFVDVH 304 (310)
Q Consensus 286 ~~~~-~~~g~~vl~g~a~v~ 304 (310)
++.+ +++|+++.++++++.
T Consensus 133 ~~~i~~~~g~lvA~a~~t~~ 152 (154)
T PRK11688 133 RMELHNEQGVHIASGTATYL 152 (154)
T ss_pred EEEEECCCCCEEEEEEEEEE
Confidence 6654 678999999988764
No 79
>COG5496 Predicted thioesterase [General function prediction only]
Probab=94.81 E-value=1.2 Score=35.08 Aligned_cols=87 Identities=18% Similarity=0.195 Sum_probs=56.5
Q ss_pred CCCHHHHhhCCCCCceechHHHHH--HHHHHHHHHhhcCCCceE-EEEEEEECcCCCCCCEEEEEEEE---ECcEEEEEE
Q 021623 214 HSDPMVAKAAGFSRPILHGLCTMG--FAVRAIIKFICRGDPNMV-KNIFSRFLLHVYPGETLVTEMWL---QGLRVIYQV 287 (310)
Q Consensus 214 H~d~~~A~~~gf~~~i~hG~~~~~--~~~~~~~~~~~~g~~~~~-~~~~~rf~~Pv~~gd~l~~~~~~---~~~~v~~~~ 287 (310)
|.++ ++...|-...++-+.+..- .++..+.+..++..-..+ ....+|..+|+.+|.++++.+.. +|..+.|++
T Consensus 17 ~t~~-~~~~~~~~~VlATp~mi~~~E~a~~el~~~~Ld~g~ttVG~ev~vrHla~~~~G~~V~i~~~l~~v~Gr~v~f~i 95 (130)
T COG5496 17 HTVP-PAEGSGMLNVLATPAMIGFMENASYELLQPYLDNGETTVGTEVLVRHLAATPPGLTVTIGARLEKVEGRKVKFRI 95 (130)
T ss_pred ccCc-hhHhCCccceeehHHHHHHHHHHHHHHHHhhCcCCcceeeEEEEeeeccCCCCCCeEEEEEEEEEEeccEEEEEE
Confidence 4444 2445565666666643321 122333344444333333 56789999999999999998776 567899998
Q ss_pred EEecCCcEEEEEEE
Q 021623 288 KVKERNRSALSGFV 301 (310)
Q Consensus 288 ~~~~~g~~vl~g~a 301 (310)
+...+|+.+.+|+-
T Consensus 96 ~a~~~~~~Ig~g~h 109 (130)
T COG5496 96 IAMEGGDKIGEGTH 109 (130)
T ss_pred EEeeCCcEEeeeEE
Confidence 87678888888764
No 80
>KOG1206 consensus Peroxisomal multifunctional beta-oxidation protein and related enzymes [Lipid transport and metabolism]
Probab=94.75 E-value=0.0082 Score=51.87 Aligned_cols=81 Identities=15% Similarity=0.064 Sum_probs=53.5
Q ss_pred eEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccceeeec-cccCCCCCCCCCCCCCCCCCceeeeeeEE
Q 021623 22 TFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSAL-FSFELEPSGAIDLPGLQHDPRLLLHGQQY 100 (310)
Q Consensus 22 ~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apPtf~~~-l~~~~~~~~~~~~~~~~~~~~~~vH~~~~ 100 (310)
....|.+|+..|++-.| |.||||.|+.-+ ..+||+. |-....+ +++-. ..... .+ ...+.-+++
T Consensus 156 v~~~ts~DqaAlyrlsg--D~NPLHiDPe~A--~~agFet---pilHGlc~lg~~~----riv~a--~~--~~a~y~~~k 220 (272)
T KOG1206|consen 156 VERFTSEDQAALYRLSG--DHNPLHIDPESA--LEAGFET---PILHGLCTLGFSA----RIVGA--QF--PPAVYKAQK 220 (272)
T ss_pred eeecchhhHHHHHHhcC--CCCccccCHHHH--HhcCCCC---chhhhHHHhhhhH----HHHHH--hc--Cchhhheee
Confidence 56778999999999989 899999998766 5555443 3333332 22111 00001 11 145778999
Q ss_pred EEEeccCCCCcEEEEEE
Q 021623 101 MELYKPFPSSASIRNEA 117 (310)
Q Consensus 101 ~~~~~Pl~~gd~l~~~~ 117 (310)
++|..|+.+||+|....
T Consensus 221 vrF~spV~pGdtll~~~ 237 (272)
T KOG1206|consen 221 VRFSSPVGPGDTLLVLV 237 (272)
T ss_pred eeecCCCCCchhHHHHH
Confidence 99999999999886543
No 81
>cd00556 Thioesterase_II Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=94.70 E-value=0.59 Score=34.53 Aligned_cols=77 Identities=13% Similarity=-0.016 Sum_probs=53.3
Q ss_pred CceechHHHHHHHHHHHHHHhhcC---CCceEEEEEEEECcCCCCCCEEEEEEEEE--C-cEEEEEEEE-ecCCcEEEEE
Q 021623 227 RPILHGLCTMGFAVRAIIKFICRG---DPNMVKNIFSRFLLHVYPGETLVTEMWLQ--G-LRVIYQVKV-KERNRSALSG 299 (310)
Q Consensus 227 ~~i~hG~~~~~~~~~~~~~~~~~g---~~~~~~~~~~rf~~Pv~~gd~l~~~~~~~--~-~~v~~~~~~-~~~g~~vl~g 299 (310)
+.++||-..++++...+....... ......++++.|.+|...++.+..+++.. + +....++.+ +++|+.+.++
T Consensus 14 ~~~~hgg~la~l~D~a~~~~~~~~~~~~~~~t~~~~i~F~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~G~lva~~ 93 (99)
T cd00556 14 DRRVFGGQLAAQSDLAALRTVPRPHGASGFASLDHHIYFHRPGDADEWLLYEVESLRDGRSRALRRGRAYQRDGKLVASA 93 (99)
T ss_pred CHHHHHHHHHHHHHHHHHhhhhcccCCCCeeeeEEEEEEcCCCCCCccEEEEEEecccCCCceEEEEEEECCCCcEEEEE
Confidence 568899888888765554332211 12334578899999999999999998873 3 344555554 5569999998
Q ss_pred EEEE
Q 021623 300 FVDV 303 (310)
Q Consensus 300 ~a~v 303 (310)
..+.
T Consensus 94 ~~~~ 97 (99)
T cd00556 94 TQSF 97 (99)
T ss_pred EEeE
Confidence 8765
No 82
>PF13279 4HBT_2: Thioesterase-like superfamily; PDB: 2W3X_E 3CK1_A 2GF6_C 2NUJ_A 2HLJ_A 2XFL_B 2XEM_B 2OIW_B 2HX5_A 2FUJ_A ....
Probab=94.65 E-value=0.56 Score=36.24 Aligned_cols=62 Identities=11% Similarity=0.253 Sum_probs=43.4
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCc--EEEEEEEEEEEecc
Q 021623 93 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGE--LLCMNRMTAFLRGA 158 (310)
Q Consensus 93 ~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge--~v~~~~~t~~~rg~ 158 (310)
+.+=.+.+++|++|++.||++++++++.++..+ - +.++.+++...+|+ ++++...+.+.-..
T Consensus 43 ~~~v~~~~i~y~~~~~~~d~~~v~~~~~~~~~~--s--~~~~~~i~~~~~g~~~~~a~~~~~~v~~d~ 106 (121)
T PF13279_consen 43 GFVVAESEIDYLRPLRFGDRLEVETRVEEIGGK--S--FRFEQEIFRPADGKGELAATGRTVMVFVDY 106 (121)
T ss_dssp EEEEEEEEEEE-S--BTTSEEEEEEEEEEEESS--E--EEEEEEEEECSTTEEEEEEEEEEEEEEEET
T ss_pred eEEEEEEEEEEcccccCCCEEEEEEEEEEECCc--E--EEEEEEEEEcCCCceEEEEEEEEEEEEEeC
Confidence 457788999999999999999999999775533 3 44555554434554 49999998887654
No 83
>COG0824 FcbC Predicted thioesterase [General function prediction only]
Probab=94.62 E-value=0.3 Score=39.31 Aligned_cols=52 Identities=10% Similarity=0.092 Sum_probs=39.3
Q ss_pred eEEEEEEEECcCCCCCCEEEEEEEEEC---cEEEEEEEEecCCcEEEEEEEEEEe
Q 021623 254 MVKNIFSRFLLHVYPGETLVTEMWLQG---LRVIYQVKVKERNRSALSGFVDVHR 305 (310)
Q Consensus 254 ~~~~~~~rf~~Pv~~gd~l~~~~~~~~---~~v~~~~~~~~~g~~vl~g~a~v~~ 305 (310)
.+.+.+++|++|++.||.++++.++.. ..+.+...+...++++.+|+.++..
T Consensus 58 ~v~~~~i~y~~p~~~~d~l~v~~~v~~~~~~s~~~~~~i~~~~~l~a~~~~~~V~ 112 (137)
T COG0824 58 VVVEAEIDYLRPARLGDVLTVRTRVEELGGKSLTLGYEIVNEDELLATGETTLVC 112 (137)
T ss_pred EEEEEEeEECCCccCCCEEEEEEEEEeecCeEEEEEEEEEeCCEEEEEEEEEEEE
Confidence 457889999999999999999998842 3566666542333888888876653
No 84
>cd03443 PaaI_thioesterase PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).
Probab=94.62 E-value=0.6 Score=35.35 Aligned_cols=56 Identities=18% Similarity=0.224 Sum_probs=43.0
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEE
Q 021623 93 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 154 (310)
Q Consensus 93 ~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~ 154 (310)
..+=.+.++.|++|++. +.+.+++++... .+..+.++.+++ +++|+++++...+++
T Consensus 57 ~~~~~~~~i~f~~p~~~-~~v~~~~~v~~~----g~~~~~~~~~~~-~~~~~~~a~a~~~~~ 112 (113)
T cd03443 57 LAVTVDLNVNYLRPARG-GDLTARARVVKL----GRRLAVVEVEVT-DEDGKLVATARGTFA 112 (113)
T ss_pred ceEEEEEEEeEEcCCCC-CeEEEEEEEEec----CceEEEEEEEEE-CCCCCEEEEEEEEEe
Confidence 34556779999999999 999999998755 234567777765 567999999887764
No 85
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=94.58 E-value=0.32 Score=43.66 Aligned_cols=78 Identities=14% Similarity=0.159 Sum_probs=59.9
Q ss_pred ceechHHHHHHHHHHHHHHhhcCCCceEEEEEEEECcCCCCCCEEEEEEEE--ECcE-EEEEEEEecCCcEEEEEEEEEE
Q 021623 228 PILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWL--QGLR-VIYQVKVKERNRSALSGFVDVH 304 (310)
Q Consensus 228 ~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~Pv~~gd~l~~~~~~--~~~~-v~~~~~~~~~g~~vl~g~a~v~ 304 (310)
.-++|-+++|.+..+..+.. .+...+.++.+.|.+|..++..+.+++++ +|.. ...++..-|+|++++++.+.+.
T Consensus 21 ~~~fGG~~~Aqal~Aa~~tv--~~~~~~~S~h~~Fl~~~~~~~pv~~~V~~lR~GRs~~~r~V~~~Q~g~~~~~a~asf~ 98 (271)
T TIGR00189 21 NRVFGGQVVGQALAAASKTV--PEEFIPHSLHSYFVRAGDPKKPIIYDVERLRDGRSFITRRVKAVQHGKTIFTLQASFQ 98 (271)
T ss_pred CceEccHHHHHHHHHHHhcC--CCCCCcceeEEEecCCCCCCCCEEEEEEEeeCCCceEEEEEEEEECCEEEEEEEEEcc
Confidence 36889899999887776653 24556789999999999999999999887 3433 3445556789999999999887
Q ss_pred ecc
Q 021623 305 RLA 307 (310)
Q Consensus 305 ~p~ 307 (310)
.+.
T Consensus 99 ~~~ 101 (271)
T TIGR00189 99 AEE 101 (271)
T ss_pred cCC
Confidence 543
No 86
>PRK10254 thioesterase; Provisional
Probab=94.50 E-value=0.98 Score=36.35 Aligned_cols=76 Identities=17% Similarity=0.125 Sum_probs=50.7
Q ss_pred CceechHHHHHHHHHHH---HHHhhcCCCceE--EEEEEEECcCCCCCCEEEEEEEEE--Cc-EEEEEEEE-ecCCcEEE
Q 021623 227 RPILHGLCTMGFAVRAI---IKFICRGDPNMV--KNIFSRFLLHVYPGETLVTEMWLQ--GL-RVIYQVKV-KERNRSAL 297 (310)
Q Consensus 227 ~~i~hG~~~~~~~~~~~---~~~~~~g~~~~~--~~~~~rf~~Pv~~gd~l~~~~~~~--~~-~v~~~~~~-~~~g~~vl 297 (310)
.-++||-.+++++-.+. .....+ ++... ..+++.|.+|+..| +|+++.++. |. ...+++.+ +++|+++.
T Consensus 50 ~G~vHGGv~~tLaD~a~g~A~~~~~~-~g~~~vTiel~in~Lrp~~~g-~l~a~a~vi~~Gr~~~v~~~~v~d~~g~l~a 127 (137)
T PRK10254 50 FGLLHGGASAALAETLGSMAGFLMTR-DGQCVVGTELNATHHRPVSEG-KVRGVCQPLHLGRQNQSWEIVVFDEQGRRCC 127 (137)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhCC-CCCeEEEEEEEeEEeccCcCC-eEEEEEEEEecCcCEEEEEEEEEcCCCCEEE
Confidence 35899998888875332 111111 22223 45788899999877 799988873 33 34556664 67899999
Q ss_pred EEEEEEE
Q 021623 298 SGFVDVH 304 (310)
Q Consensus 298 ~g~a~v~ 304 (310)
.++.++.
T Consensus 128 ~~~~t~~ 134 (137)
T PRK10254 128 TCRLGTA 134 (137)
T ss_pred EEEEEEE
Confidence 8887764
No 87
>cd01287 FabA FabA, beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase: Bacterial protein of the type II, fatty acid synthase system that binds ACP and catalyzes both dehydration and isomerization reactions, apparently in the same active site. The FabA structure is a homodimer with two independent active sites located at the dimer interface. Each active site is tunnel-shaped and completely inaccessible to solvent. No metal ions or cofactors are required for ligand binding or catalysis.
Probab=94.46 E-value=0.52 Score=38.61 Aligned_cols=75 Identities=8% Similarity=0.095 Sum_probs=45.8
Q ss_pred CCceechHHHHHHHHHHHHHHhh--cC-----CCc---eE-EEEEEEECcCCCCCC-EEEEEEEEEC-------cEEEEE
Q 021623 226 SRPILHGLCTMGFAVRAIIKFIC--RG-----DPN---MV-KNIFSRFLLHVYPGE-TLVTEMWLQG-------LRVIYQ 286 (310)
Q Consensus 226 ~~~i~hG~~~~~~~~~~~~~~~~--~g-----~~~---~~-~~~~~rf~~Pv~~gd-~l~~~~~~~~-------~~v~~~ 286 (310)
..++++|.+..=.+++++.-+.+ +. .+. .+ ..-+++|++||+||| +|++++++.. +.+.++
T Consensus 48 ~~pvmPG~L~iEamaQ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~kfr~~v~Pgd~~l~~e~~i~~~~~~~~~~~~~~~ 127 (150)
T cd01287 48 GDPVMPGSLGLEAMIQLLQFYLIWLGLGTGVDNPRFQGAPGGPGEWKYRGQITPHNKKVTYEVHIKEVGRDGPRPYIIAD 127 (150)
T ss_pred CCCcCchHHHHHHHHHHHHHHHhhcccccccCcccceeEeccceEEEECccCcCCCEEEEEEEEEEEEEccCCccEEEEE
Confidence 46888887665555443322211 11 111 12 234799999999999 7988887521 456666
Q ss_pred EEEecCCcEEEEEE
Q 021623 287 VKVKERNRSALSGF 300 (310)
Q Consensus 287 ~~~~~~g~~vl~g~ 300 (310)
...--+|+++.+++
T Consensus 128 ~~~~vdg~~v~~a~ 141 (150)
T cd01287 128 ASLWVDGLRIYEAK 141 (150)
T ss_pred EEEEECCEEEEEEE
Confidence 65445788888764
No 88
>PLN02322 acyl-CoA thioesterase
Probab=94.44 E-value=0.94 Score=37.26 Aligned_cols=78 Identities=18% Similarity=0.096 Sum_probs=48.9
Q ss_pred CceechHHHHHHHHHHH--HHHhhcC-CCceEEEEEEEECcCCCCCCEEEEEEEEE--Cc-EEEEEEEE-ec------CC
Q 021623 227 RPILHGLCTMGFAVRAI--IKFICRG-DPNMVKNIFSRFLLHVYPGETLVTEMWLQ--GL-RVIYQVKV-KE------RN 293 (310)
Q Consensus 227 ~~i~hG~~~~~~~~~~~--~~~~~~g-~~~~~~~~~~rf~~Pv~~gd~l~~~~~~~--~~-~v~~~~~~-~~------~g 293 (310)
.-++||-..++++-.+. ......+ ....-..+++.|.+|+..|+.|+++.++. |. ...+++.+ ++ .|
T Consensus 42 ~G~vHGGv~atLaDta~g~A~~~~~~~~~~vTiel~infLrpa~~G~~L~Aea~vv~~Gr~~~~~ev~V~~~~~~~~~~~ 121 (154)
T PLN02322 42 FKVLHGGVSALIAESLASLGAHMASGFKRVAGIQLSINHLKSADLGDLVFAEATPVSTGKTIQVWEVKLWKTTDKDKANK 121 (154)
T ss_pred CCCccHHHHHHHHHHHHHHHHhhccCCCceEEEEEEEEEeccCCCCCEEEEEEEEEecCCCEEEEEEEEEECCCCcccCC
Confidence 35899998888885331 1111111 12222567899999999999999998873 33 33344442 31 26
Q ss_pred cEEEEEEEEEE
Q 021623 294 RSALSGFVDVH 304 (310)
Q Consensus 294 ~~vl~g~a~v~ 304 (310)
+.+..++.++.
T Consensus 122 ~lva~a~~T~~ 132 (154)
T PLN02322 122 ILISSSRVTLI 132 (154)
T ss_pred eEEEEEEEEEE
Confidence 77777877774
No 89
>PF07977 FabA: FabA-like domain; InterPro: IPR013114 Fatty acids biosynthesis occurs by two distinct pathways: in fungi, mammals and mycobacteria, type I or associative fatty-acid biosynthesis (type I FAS) is accomplished by multifunctional proteins in which distinct domains catalyse specific reactions; in plants and most bacteria, type II or dissociative fatty-acid biosynthesis (type II FAS) is accomplished by distinct enzymes []. Both FabZ and FabA catalyse the dehydration of beta-hydroxyacyl acyl carrier protein (ACP) to trans 2-enoyl ACP. However, FabZ and FabA display subtle differences in substrate specificities, whereby FabA is most effective on acyl ACPs of 9-11 carbon atoms in length, while FabZ is less specific. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains. This enzyme domain has a HotDog fold.; PDB: 3D6X_F 2GLV_J 2GLM_E 2GLP_E 2GLL_C 1U1Z_F 3ESI_A 3AZB_T 3AZA_M 3AZ9_U ....
Probab=94.44 E-value=0.25 Score=39.60 Aligned_cols=54 Identities=19% Similarity=0.319 Sum_probs=38.4
Q ss_pred eeeeeeEEEEEeccCCCCc-EEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEE
Q 021623 93 LLLHGQQYMELYKPFPSSA-SIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMN 149 (310)
Q Consensus 93 ~~vH~~~~~~~~~Pl~~gd-~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~ 149 (310)
..+.+-.+++|++|+.||| .|+.++++..+.....+ +..++.+++ .+|++|++.
T Consensus 83 ~~l~~~~~~kF~~~v~Pg~~~l~~~v~i~~~~~~~~~-~~~~~~~~~--vdg~~v~~~ 137 (138)
T PF07977_consen 83 PFLAGIRNVKFRGPVYPGDKTLRIEVEIKKIRRREGG-MAIFDGTAY--VDGELVAEA 137 (138)
T ss_dssp EEEEEEEEEEE-S-B-TTE-EEEEEEEEEEEEEEETT-EEEEEEEEE--ETTEEEEEE
T ss_pred EEeccccEEEECccEeCCCcEEEEEEEEEEeecccCC-EEEEEEEEE--ECCEEEEEE
Confidence 4577899999999999999 99999999998554433 234554543 479999875
No 90
>cd01287 FabA FabA, beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase: Bacterial protein of the type II, fatty acid synthase system that binds ACP and catalyzes both dehydration and isomerization reactions, apparently in the same active site. The FabA structure is a homodimer with two independent active sites located at the dimer interface. Each active site is tunnel-shaped and completely inaccessible to solvent. No metal ions or cofactors are required for ligand binding or catalysis.
Probab=94.36 E-value=0.43 Score=39.06 Aligned_cols=60 Identities=10% Similarity=0.060 Sum_probs=46.7
Q ss_pred eeeeeeEEEEEeccCCCCc-EEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEE
Q 021623 93 LLLHGQQYMELYKPFPSSA-SIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 154 (310)
Q Consensus 93 ~~vH~~~~~~~~~Pl~~gd-~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~ 154 (310)
..+-+-.+++|++|+.||| +|+.++++..+...+.+.++..+..++ .+|++|++....-+
T Consensus 85 ~~l~~~~~~kfr~~v~Pgd~~l~~e~~i~~~~~~~~~~~~~~~~~~~--vdg~~v~~a~~~~~ 145 (150)
T cd01287 85 GAPGGPGEWKYRGQITPHNKKVTYEVHIKEVGRDGPRPYIIADASLW--VDGLRIYEAKDIAV 145 (150)
T ss_pred eEeccceEEEECccCcCCCEEEEEEEEEEEEEccCCccEEEEEEEEE--ECCEEEEEEEccEE
Confidence 3455567899999999999 899999999998755455566666654 48999999886644
No 91
>cd03442 BFIT_BACH Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, and brown adipose tissues. The archeal and eukaryotic members of this family have two tandem copies of the conserved hot dog fold, while most bacterial members have only one copy.
Probab=94.34 E-value=0.51 Score=36.33 Aligned_cols=54 Identities=11% Similarity=0.110 Sum_probs=39.7
Q ss_pred EEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECC----CCcEEEEEEEEEEEec
Q 021623 100 YMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAE----SGELLCMNRMTAFLRG 157 (310)
Q Consensus 100 ~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~----~Ge~v~~~~~t~~~rg 157 (310)
++.|++|++.||.|.+++++..+..+ .+.++.+++.+. +++++++...+++...
T Consensus 57 ~~~f~~p~~~gd~l~i~~~v~~~g~~----~~~~~~~i~~~~~~~~~~~~~a~~~~~~v~~~ 114 (123)
T cd03442 57 RIDFLKPVRVGDVVELSARVVYTGRT----SMEVGVEVEAEDPLTGERRLVTSAYFTFVALD 114 (123)
T ss_pred ceEEcCccccCcEEEEEEEEEEecCC----eEEEEEEEEEecCCCCcEEEEEEEEEEEEEEC
Confidence 89999999999999999999888322 234444443222 3578999999988874
No 92
>PRK10293 acyl-CoA esterase; Provisional
Probab=94.27 E-value=1 Score=36.12 Aligned_cols=77 Identities=14% Similarity=0.091 Sum_probs=50.7
Q ss_pred CceechHHHHHHHHHHH---HHHhhc-CCCceEEEEEEEECcCCCCCCEEEEEEEEE--Cc-EEEEEEEE-ecCCcEEEE
Q 021623 227 RPILHGLCTMGFAVRAI---IKFICR-GDPNMVKNIFSRFLLHVYPGETLVTEMWLQ--GL-RVIYQVKV-KERNRSALS 298 (310)
Q Consensus 227 ~~i~hG~~~~~~~~~~~---~~~~~~-g~~~~~~~~~~rf~~Pv~~gd~l~~~~~~~--~~-~v~~~~~~-~~~g~~vl~ 298 (310)
.-++||-..++++-... .....+ +....-..+++.|.+|+..| +|+++.++. |. ...+++.+ +++|+++..
T Consensus 50 ~G~lHGGv~~tLaD~a~~~a~~~~~~~~~~~vTiel~infl~p~~~g-~l~a~a~vv~~Gr~~~~~~~~v~d~~g~l~A~ 128 (136)
T PRK10293 50 FGLLHGGASVVLAESIGSVAGYLCTEGEQKVVGLEINANHVRSAREG-RVRGVCKPLHLGSRHQVWQIEIFDEKGRLCCS 128 (136)
T ss_pred cCcccHHHHHHHHHHHHHHHHHhcccCCceEEEEEEEeEEecccCCc-eEEEEEEEEecCCCEEEEEEEEEeCCCCEEEE
Confidence 45899988888775432 111111 11222246789999999988 699988873 33 34556654 678999999
Q ss_pred EEEEEE
Q 021623 299 GFVDVH 304 (310)
Q Consensus 299 g~a~v~ 304 (310)
++.++.
T Consensus 129 ~~~t~~ 134 (136)
T PRK10293 129 SRLTTA 134 (136)
T ss_pred EEEEEE
Confidence 888764
No 93
>TIGR02799 thio_ybgC tol-pal system-associated acyl-CoA thioesterase. The tol-pal system consists of five critical genes. Inner membrane proteins TolQ and TolR convert protomotive force to energy that is transduced through TolA to an outer membrane complex of TolB and Pal. The system is known to be required to maintain outer membrane integrity. In a system with several homologous parts, ExbB and ExbD transduces energy through TonB to a variety of outer membrane proteins, many of which are siderophore receptors. The tol-pal system therefore may also be involved in transport. This family consists of a protein nearly always found in operons with the genes of the tol-pal system. The significance of this thioesterase to the tol-pal system is unclear, but either of two observations may be relevant. First, Pal, or peptidoglycan-associated lipoprotein, has a conserved N-terminal cleavage and acylation that makes it a lipoprotein. Second, the tol-pal system is implicated not only in the import o
Probab=94.25 E-value=0.95 Score=35.15 Aligned_cols=60 Identities=13% Similarity=0.165 Sum_probs=46.2
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEecc
Q 021623 93 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGA 158 (310)
Q Consensus 93 ~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg~ 158 (310)
..+=.+.+++|++|++.||+|++++++..+..+ .+.+..+++ .+|+++++..++.+....
T Consensus 52 ~~vv~~~~i~y~~~~~~gd~v~v~~~v~~~~~~----~~~~~~~i~--~~g~~~a~~~~~~v~vd~ 111 (126)
T TIGR02799 52 VFVVRSMELDYLKPARLDDLLTVTTRVVELKGA----SLVFAQEVR--RGDTLLCEATVEVACVDA 111 (126)
T ss_pred EEEEEEEEEEEcCcccCCCEEEEEEEEEecCce----EEEEEEEEE--eCCEEEEEEEEEEEEEEC
Confidence 456678999999999999999999999876533 234455544 368999999998877643
No 94
>TIGR02799 thio_ybgC tol-pal system-associated acyl-CoA thioesterase. The tol-pal system consists of five critical genes. Inner membrane proteins TolQ and TolR convert protomotive force to energy that is transduced through TolA to an outer membrane complex of TolB and Pal. The system is known to be required to maintain outer membrane integrity. In a system with several homologous parts, ExbB and ExbD transduces energy through TonB to a variety of outer membrane proteins, many of which are siderophore receptors. The tol-pal system therefore may also be involved in transport. This family consists of a protein nearly always found in operons with the genes of the tol-pal system. The significance of this thioesterase to the tol-pal system is unclear, but either of two observations may be relevant. First, Pal, or peptidoglycan-associated lipoprotein, has a conserved N-terminal cleavage and acylation that makes it a lipoprotein. Second, the tol-pal system is implicated not only in the import o
Probab=93.97 E-value=0.59 Score=36.37 Aligned_cols=52 Identities=12% Similarity=0.158 Sum_probs=37.9
Q ss_pred ceEEEEEEEECcCCCCCCEEEEEEEEEC---cEEEEEEEEecCCcEEEEEEEEEE
Q 021623 253 NMVKNIFSRFLLHVYPGETLVTEMWLQG---LRVIYQVKVKERNRSALSGFVDVH 304 (310)
Q Consensus 253 ~~~~~~~~rf~~Pv~~gd~l~~~~~~~~---~~v~~~~~~~~~g~~vl~g~a~v~ 304 (310)
..+....++|.+|+..||+|.++.++.+ ..+.+......+|+.+..|..+..
T Consensus 53 ~vv~~~~i~y~~~~~~gd~v~v~~~v~~~~~~~~~~~~~i~~~g~~~a~~~~~~v 107 (126)
T TIGR02799 53 FVVRSMELDYLKPARLDDLLTVTTRVVELKGASLVFAQEVRRGDTLLCEATVEVA 107 (126)
T ss_pred EEEEEEEEEEcCcccCCCEEEEEEEEEecCceEEEEEEEEEeCCEEEEEEEEEEE
Confidence 3456889999999999999999999853 234444333346888888876543
No 95
>COG0824 FcbC Predicted thioesterase [General function prediction only]
Probab=93.88 E-value=1.3 Score=35.61 Aligned_cols=60 Identities=15% Similarity=0.144 Sum_probs=47.5
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEecc
Q 021623 93 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGA 158 (310)
Q Consensus 93 ~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg~ 158 (310)
..+=.+.+++|++|++.||.+++++++..+..+ -+++..+++ +++ +++++...+.+.-..
T Consensus 56 ~~~v~~~~i~y~~p~~~~d~l~v~~~v~~~~~~----s~~~~~~i~-~~~-~l~a~~~~~~V~v~~ 115 (137)
T COG0824 56 AFVVVEAEIDYLRPARLGDVLTVRTRVEELGGK----SLTLGYEIV-NED-ELLATGETTLVCVDL 115 (137)
T ss_pred EEEEEEEEeEECCCccCCCEEEEEEEEEeecCe----EEEEEEEEE-eCC-EEEEEEEEEEEEEEC
Confidence 356678999999999999999999999887643 356666654 344 999999999887654
No 96
>PLN02647 acyl-CoA thioesterase
Probab=93.86 E-value=6.6 Score=37.93 Aligned_cols=59 Identities=14% Similarity=0.154 Sum_probs=38.5
Q ss_pred EEEEEeccCCCCcEEEEEEEEEEEEEcCCe-EEEEEEEEEEE--CCCCcEEEEEEEEEEEecc
Q 021623 99 QYMELYKPFPSSASIRNEACIAGLHDKGKA-AILEIETKSYN--AESGELLCMNRMTAFLRGA 158 (310)
Q Consensus 99 ~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G-~~v~~~~~~~~--~~~Ge~v~~~~~t~~~rg~ 158 (310)
.++.|++|++.|+-|++.++|.-+-.. +. +.+.+..+-.. ++...++++...+++.+..
T Consensus 150 D~i~F~~Pi~~g~~v~l~g~Vt~vGrS-SMEV~v~V~~~~~~~~~~~~~~~~~a~FtfVA~D~ 211 (437)
T PLN02647 150 DKIVLKKPIRVDVDLKIVGAVTWVGRS-SMEIQLEVIQPTKDESNTSDSVALTANFTFVARDS 211 (437)
T ss_pred CcEEEcCCCcCCcEEEEEEEEEEecCC-eEEEEEEEEEccccCCCCcEEEEEEEEEEEEEEcC
Confidence 478899999999999999999876332 22 22222221000 0123468888899999875
No 97
>COG2050 PaaI HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.45 E-value=0.84 Score=36.69 Aligned_cols=57 Identities=19% Similarity=0.287 Sum_probs=42.6
Q ss_pred eeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEe
Q 021623 95 LHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLR 156 (310)
Q Consensus 95 vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~r 156 (310)
+=.+..+.|.||.+.|+ +++++++... |+- +...+.+++.++.|++|+..+.++++.
T Consensus 81 ~ti~l~i~flr~~~~g~-v~a~a~v~~~---G~~-~~v~~i~v~~~~~~~lva~~~~t~~v~ 137 (141)
T COG2050 81 VTLELNINFLRPVKEGD-VTAEARVLHL---GRR-VAVVEIEVKNDEGGRLVAKGTGTYAVL 137 (141)
T ss_pred EEEEEEehhccCCCCCe-EEEEEEEEee---CCE-EEEEEEEEEECCCCeEEEEEEEEEEEe
Confidence 34477899999999999 9999999877 322 223455554456679999999998874
No 98
>PRK13188 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed
Probab=93.33 E-value=0.46 Score=46.04 Aligned_cols=58 Identities=12% Similarity=0.238 Sum_probs=44.8
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEe
Q 021623 94 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLR 156 (310)
Q Consensus 94 ~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~r 156 (310)
.+=+-.+++|++|+.+||+|++++++..... +| ++.++.+++ ++|++|++.+..+++.
T Consensus 403 ~LlgI~kvKF~~PV~PGDtL~I~veI~~~~~--~g-iv~f~g~~~--vdGelVaeael~~~v~ 460 (464)
T PRK13188 403 YFMKIDKVKFRQKVVPGDTLIFKVELLSPIR--RG-ICQMQGKAY--VNGKLVCEAELMAQIV 460 (464)
T ss_pred EEEeccEEEEcCCCCCCCEEEEEEEEEEEec--CC-EEEEEEEEE--ECCEEEEEEEEEEEEe
Confidence 3444479999999999999999999887443 23 456666653 6899999999998774
No 99
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=93.19 E-value=0.84 Score=41.50 Aligned_cols=80 Identities=13% Similarity=0.087 Sum_probs=61.0
Q ss_pred CceechHHHHHHHHHHHHHHhhcCCCceEEEEEEEECcCCCCCCEEEEEEEE--ECc-EEEEEEEEecCCcEEEEEEEEE
Q 021623 227 RPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWL--QGL-RVIYQVKVKERNRSALSGFVDV 303 (310)
Q Consensus 227 ~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~Pv~~gd~l~~~~~~--~~~-~v~~~~~~~~~g~~vl~g~a~v 303 (310)
..-+.|-++++.+..+..+.. .+...+.++.+.|.+|..++..+.++++. +|. .....+...|+|+++++..+.+
T Consensus 31 ~r~~fGGqv~AQal~AA~~tv--~~~~~~hSlh~~Fl~pg~~~~pi~y~Ve~lRdGRSfstr~V~a~Q~g~~if~~~~sF 108 (286)
T PRK10526 31 LRQVFGGQVVGQALYAAKETV--PEERLVHSFHSYFLRPGDSQKPIIYDVETLRDGNSFSARRVAAIQNGKPIFYMTASF 108 (286)
T ss_pred CCceechHHHHHHHHHHHhcC--CCCCCceEEEEEcCCCCCCCCCEEEEEEEEeCCCceEeEEEEEEECCEEEEEEEEEe
Confidence 456889999998887666553 23456789999999999999999998886 343 3344555678999999999988
Q ss_pred EeccC
Q 021623 304 HRLAS 308 (310)
Q Consensus 304 ~~p~~ 308 (310)
..+.+
T Consensus 109 ~~~e~ 113 (286)
T PRK10526 109 QAPEA 113 (286)
T ss_pred ccCCC
Confidence 76543
No 100
>PRK10254 thioesterase; Provisional
Probab=93.14 E-value=1.6 Score=35.14 Aligned_cols=60 Identities=15% Similarity=0.217 Sum_probs=44.7
Q ss_pred ceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEec
Q 021623 92 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRG 157 (310)
Q Consensus 92 ~~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg 157 (310)
...+=.+-++.|++|...| .|++++++.. +|+ .+...+.+++ +++|++++..+.+..+.|
T Consensus 78 ~~~vTiel~in~Lrp~~~g-~l~a~a~vi~---~Gr-~~~v~~~~v~-d~~g~l~a~~~~t~~i~~ 137 (137)
T PRK10254 78 QCVVGTELNATHHRPVSEG-KVRGVCQPLH---LGR-QNQSWEIVVF-DEQGRRCCTCRLGTAVLG 137 (137)
T ss_pred CeEEEEEEEeEEeccCcCC-eEEEEEEEEe---cCc-CEEEEEEEEE-cCCCCEEEEEEEEEEEeC
Confidence 3567778899999999877 7888888542 333 3345666655 689999999999987753
No 101
>PF01643 Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR002864 This entry represents various acyl-acyl carrier protein (ACP) thioesterases (TE) which terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid []. These proteins contain a duplication of two 4HBT-like domains.; GO: 0016790 thiolester hydrolase activity, 0006633 fatty acid biosynthetic process; PDB: 2ESS_A 2OWN_A.
Probab=93.01 E-value=2.7 Score=37.57 Aligned_cols=61 Identities=18% Similarity=0.122 Sum_probs=41.8
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEEC-CCCcEEEEEEEEEEEecc
Q 021623 93 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNA-ESGELLCMNRMTAFLRGA 158 (310)
Q Consensus 93 ~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~-~~Ge~v~~~~~t~~~rg~ 158 (310)
..|-....++++|+..-||+|++++.+.+.. +.+..-...++ + ++|+++++..+..++-..
T Consensus 60 ~Wvl~r~~i~i~r~P~~~e~i~i~Tw~~~~~----~~~~~R~f~i~-d~~~G~~l~~a~s~WvliD~ 121 (261)
T PF01643_consen 60 AWVLSRYQIEIHRYPRWGEKITIETWPSGFK----RFFAYRDFEIY-DAEDGELLARATSIWVLIDL 121 (261)
T ss_dssp EEEEEEEEEEESS--BTT-EEEEEEEEEEE-----SSEEEEEEEEE---TTS-EEEEEEEEEEEEET
T ss_pred EEEEEEEEEEEEecCCCCCEEEEEEEeccCC----CcEEEEEEEEE-ECCCCcEEEEEEEEEEEEEh
Confidence 3577789999999999999999999998864 22223333443 5 899999999999887543
No 102
>PLN02370 acyl-ACP thioesterase
Probab=92.97 E-value=9 Score=36.80 Aligned_cols=61 Identities=5% Similarity=0.018 Sum_probs=47.0
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEec
Q 021623 93 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRG 157 (310)
Q Consensus 93 ~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg 157 (310)
..|-...+++++||..-||+|++++.+.++ ++.. +..+.++++..+|+++++..++.+.-.
T Consensus 196 ~WVLtr~~I~~~R~P~~gD~V~V~Twv~~~--~k~~--~~Rdf~I~D~~~Ge~la~A~SvWV~mD 256 (419)
T PLN02370 196 IWVVTRMQVLVDRYPTWGDVVQVDTWVSAS--GKNG--MRRDWLVRDCKTGETLTRASSVWVMMN 256 (419)
T ss_pred eEEEEEEEEEeCcCCCCCCEEEEEEEEeeC--CCCE--EEEEEEEEECCCCeEEEEEEEEEEEEE
Confidence 467789999999999999999999999886 2222 333445443347999999999888754
No 103
>COG1607 Acyl-CoA hydrolase [Lipid metabolism]
Probab=92.88 E-value=2.4 Score=34.93 Aligned_cols=50 Identities=14% Similarity=0.011 Sum_probs=31.9
Q ss_pred echHHHHHHHHHH--H-HHHhhcCCCceEEEEEEEECcCCCCCCEEEEEEEEE
Q 021623 230 LHGLCTMGFAVRA--I-IKFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWLQ 279 (310)
Q Consensus 230 ~hG~~~~~~~~~~--~-~~~~~~g~~~~~~~~~~rf~~Pv~~gd~l~~~~~~~ 279 (310)
+||-+.++++-.. + ...++.+......--++.|.+||+.||.|.+.+++.
T Consensus 31 ifGG~lm~~mD~~a~i~A~~~a~~~vVTasvd~v~F~~Pv~vGd~v~~~a~v~ 83 (157)
T COG1607 31 IFGGWLLSWMDLAAAIAASRHAGGRVVTASVDSVDFKKPVRVGDIVCLYARVV 83 (157)
T ss_pred cccHHHHHHHHHHHHHHHHHHhCCeEEEEEeceEEEccccccCcEEEEEEEEe
Confidence 6777777776422 1 122233322222223699999999999999999884
No 104
>PF12119 DUF3581: Protein of unknown function (DUF3581); InterPro: IPR021974 This family consists of uncharacterised bacterial proteins.
Probab=92.81 E-value=0.57 Score=40.02 Aligned_cols=66 Identities=17% Similarity=0.205 Sum_probs=46.3
Q ss_pred ecCHHHHHHHHH-HhCCCCCCCCCHHHHhhCCCCCceechHHHHHHHHHHHHHHhhcCCCceEEEEEEEECcCCCCCCEE
Q 021623 194 DYTQPSQALVYR-LSGDYNPLHSDPMVAKAAGFSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETL 272 (310)
Q Consensus 194 ~~~~~d~~~~~~-~sgD~npiH~d~~~A~~~gf~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~Pv~~gd~l 272 (310)
..+++..-.||. +.|||||||-- .-++=.|+|=+++++++. .+ +.-.++.++|.+.|-.|-.|
T Consensus 15 ~is~~QAS~FAK~VAgDFNPIHD~-------DaKRFCVPGDLLFalvL~----~~-----GlS~~M~f~F~GMVg~~v~L 78 (218)
T PF12119_consen 15 SISAEQASRFAKEVAGDFNPIHDP-------DAKRFCVPGDLLFALVLA----KY-----GLSQKMRFRFSGMVGDDVPL 78 (218)
T ss_pred EEcHHHHhHHHHHhccCCCccCCC-------CCccccCccHHHHHHHHH----hc-----CccceeEEEEeeeecCCcee
Confidence 346777778885 89999999942 235567899888887652 22 12256789999997666666
Q ss_pred EEE
Q 021623 273 VTE 275 (310)
Q Consensus 273 ~~~ 275 (310)
.+.
T Consensus 79 ~f~ 81 (218)
T PF12119_consen 79 HFP 81 (218)
T ss_pred ecc
Confidence 554
No 105
>cd00493 FabA_FabZ FabA/Z, beta-hydroxyacyl-acyl carrier protein (ACP)-dehydratases: One of several distinct enzyme types of the dissociative, type II, fatty acid synthase system (found in bacteria and plants) required to complete successive cycles of fatty acid elongation. The third step of the elongation cycle, the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, is catalyzed by FabA or FabZ. FabA is bifunctional and catalyzes an additional isomerization reaction of trans-2-acyl-ACP to cis-3-acyl-ACP, an essential reaction to unsaturated fatty acid synthesis. FabZ is the primary dehydratase that participates in the elongation cycles of saturated as well as unsaturated fatty acid biosynthesis, whereas FabA is more active in the dehydration of beta-hydroxydecanoyl-ACP. The FabA structure is homodimeric with two independent active sites located at the dimer interface.
Probab=92.78 E-value=1.2 Score=34.66 Aligned_cols=52 Identities=13% Similarity=0.275 Sum_probs=39.6
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEE
Q 021623 93 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNR 150 (310)
Q Consensus 93 ~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~ 150 (310)
..+-+-++++|++|+.+||+|++++++..... | ++.++.+++ + +|+++++..
T Consensus 75 ~~l~~~~~~kf~~~v~pgd~l~i~~~i~~~~~---~-~~~~~~~~~-~-~g~~v~~~~ 126 (131)
T cd00493 75 GYLAGVRKVKFRGPVLPGDTLTLEVELLKVRR---G-LGKFDGRAY-V-DGKLVAEAE 126 (131)
T ss_pred EEEEEcceeEECCCcCCCCEEEEEEEEEEeeC---C-EEEEEEEEE-E-CCEEEEEEE
Confidence 45566689999999999999999999987664 2 345555544 2 589998887
No 106
>TIGR00051 acyl-CoA thioester hydrolase, YbgC/YbaW family. This model describes a subset of related acyl-CoA thioesterases that include several at least partially characterized proteins. YbgC is an acyl-CoA thioesterase associated with the Tol-Pal system. YbaW is part of the FadM regulon.
Probab=92.47 E-value=2.6 Score=31.94 Aligned_cols=57 Identities=14% Similarity=0.116 Sum_probs=40.1
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021623 94 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 155 (310)
Q Consensus 94 ~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 155 (310)
.+=.+.++.|++|++.||++++++++..+..+ .+.+..+++ +++|++++...++.+.
T Consensus 49 ~~v~~~~i~y~~~~~~gd~v~v~~~~~~~~~~----s~~~~~~i~-~~~~~~~~~~~~~~v~ 105 (117)
T TIGR00051 49 FVVVNINIEYKKPARLDDVLEIRTQIEELNGF----SFVFSQEIF-NEDEALLKAATVIVVC 105 (117)
T ss_pred EEEEEEEEEECCcccCCCEEEEEEEEEecCcE----EEEEEEEEE-eCCCcEEEeeEEEEEE
Confidence 45567899999999999999999999987533 244455544 4566666665554433
No 107
>PRK10293 acyl-CoA esterase; Provisional
Probab=92.16 E-value=2 Score=34.52 Aligned_cols=57 Identities=14% Similarity=0.163 Sum_probs=42.4
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021623 93 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 155 (310)
Q Consensus 93 ~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 155 (310)
..+=.+-++.|.+|.+.| .|++++++.. .|+ .+...+.+++ +++|++++..+.++.+
T Consensus 79 ~~vTiel~infl~p~~~g-~l~a~a~vv~---~Gr-~~~~~~~~v~-d~~g~l~A~~~~t~~i 135 (136)
T PRK10293 79 KVVGLEINANHVRSAREG-RVRGVCKPLH---LGS-RHQVWQIEIF-DEKGRLCCSSRLTTAI 135 (136)
T ss_pred eEEEEEEEeEEecccCCc-eEEEEEEEEe---cCC-CEEEEEEEEE-eCCCCEEEEEEEEEEE
Confidence 457778999999999987 6888886643 222 3455666655 6899999999998765
No 108
>cd00556 Thioesterase_II Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=92.15 E-value=1.2 Score=32.92 Aligned_cols=56 Identities=11% Similarity=0.123 Sum_probs=40.9
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEE
Q 021623 94 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 154 (310)
Q Consensus 94 ~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~ 154 (310)
..-.+.++.|++|...++.+..++++.. .+++ +...+.+++ +++|++|++..++++
T Consensus 43 ~~t~~~~i~F~~~~~~~~~~~~~~~~~~---~g~~-~~~~~~~i~-~~~G~lva~~~~~~~ 98 (99)
T cd00556 43 FASLDHHIYFHRPGDADEWLLYEVESLR---DGRS-RALRRGRAY-QRDGKLVASATQSFL 98 (99)
T ss_pred eeeeEEEEEEcCCCCCCccEEEEEEecc---cCCC-ceEEEEEEE-CCCCcEEEEEEEeEc
Confidence 3556789999999999999988877643 2333 244555554 568999999988764
No 109
>COG1946 TesB Acyl-CoA thioesterase [Lipid metabolism]
Probab=91.61 E-value=1 Score=40.57 Aligned_cols=65 Identities=11% Similarity=0.119 Sum_probs=51.6
Q ss_pred CCCceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEecc
Q 021623 89 HDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGA 158 (310)
Q Consensus 89 ~~~~~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg~ 158 (310)
.+..++.-..+.+.||||++.+|.+....+.-+... ++| -++.+++ +++|+++++..+.-++|..
T Consensus 221 ~~~~~~aSLDHs~wFhrp~~~ddWlLy~~~sp~A~~-~rg---l~~G~lf-~r~G~LiA~~~QEG~~r~~ 285 (289)
T COG1946 221 TPGIQVASLDHSMWFHRPFRLDDWLLYAQESPSASG-GRG---LVRGQLF-DRDGQLIASVVQEGLIRYH 285 (289)
T ss_pred cCcceEeeccceEEEeccccCCCEEEEEeeCCcccC-Ccc---eeeeEEE-cCCCCEEEEEeeeEEEecc
Confidence 466778888999999999999999988877766553 234 3455654 7999999999999988854
No 110
>PRK10694 acyl-CoA esterase; Provisional
Probab=91.43 E-value=5.3 Score=31.91 Aligned_cols=51 Identities=12% Similarity=-0.080 Sum_probs=33.4
Q ss_pred eechHHHHHHHHHHH--HHHhhcCCCceEEEE-EEEECcCCCCCCEEEEEEEEE
Q 021623 229 ILHGLCTMGFAVRAI--IKFICRGDPNMVKNI-FSRFLLHVYPGETLVTEMWLQ 279 (310)
Q Consensus 229 i~hG~~~~~~~~~~~--~~~~~~g~~~~~~~~-~~rf~~Pv~~gd~l~~~~~~~ 279 (310)
.+||-..+.++.... ......+......++ ++.|.+|++.||.|.+.+++.
T Consensus 28 ~lfGG~ll~~~D~~a~i~a~~~~~~~~vtv~vd~i~F~~Pv~~Gd~l~~~a~V~ 81 (133)
T PRK10694 28 DIFGGWLMSQMDIGGAILAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCV 81 (133)
T ss_pred cEeHHHHHHHHHHHHHHHHHHHcCCceEEEEECceEECCCcccCcEEEEEEEEE
Confidence 677777777654222 111122333344566 579999999999999999884
No 111
>PF13279 4HBT_2: Thioesterase-like superfamily; PDB: 2W3X_E 3CK1_A 2GF6_C 2NUJ_A 2HLJ_A 2XFL_B 2XEM_B 2OIW_B 2HX5_A 2FUJ_A ....
Probab=91.34 E-value=2.2 Score=32.87 Aligned_cols=52 Identities=15% Similarity=0.160 Sum_probs=33.5
Q ss_pred ceEEEEEEEECcCCCCCCEEEEEEEEE---CcEEEEEEE--EecCCcE--EEEEEEEEE
Q 021623 253 NMVKNIFSRFLLHVYPGETLVTEMWLQ---GLRVIYQVK--VKERNRS--ALSGFVDVH 304 (310)
Q Consensus 253 ~~~~~~~~rf~~Pv~~gd~l~~~~~~~---~~~v~~~~~--~~~~g~~--vl~g~a~v~ 304 (310)
..+.+.+++|.+|+..||.+.++.++. +..+.+... .+++|+. +.+|..+..
T Consensus 44 ~~v~~~~i~y~~~~~~~d~~~v~~~~~~~~~~s~~~~~~i~~~~~g~~~~~a~~~~~~v 102 (121)
T PF13279_consen 44 FVVAESEIDYLRPLRFGDRLEVETRVEEIGGKSFRFEQEIFRPADGKGELAATGRTVMV 102 (121)
T ss_dssp EEEEEEEEEE-S--BTTSEEEEEEEEEEEESSEEEEEEEEEECSTTEEEEEEEEEEEEE
T ss_pred EEEEEEEEEEcccccCCCEEEEEEEEEEECCcEEEEEEEEEEcCCCceEEEEEEEEEEE
Confidence 345788999999999999999988873 345555544 3345655 666765543
No 112
>PLN02322 acyl-CoA thioesterase
Probab=90.83 E-value=3.6 Score=33.84 Aligned_cols=60 Identities=20% Similarity=0.137 Sum_probs=42.6
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEEC----C-CCcEEEEEEEEEEEe
Q 021623 93 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNA----E-SGELLCMNRMTAFLR 156 (310)
Q Consensus 93 ~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~----~-~Ge~v~~~~~t~~~r 156 (310)
..+=.+-++.|++|.+.|+.|++++++.. +|+ .+...+.+++.. + +|.+++..+.|+...
T Consensus 70 ~~vTiel~infLrpa~~G~~L~Aea~vv~---~Gr-~~~~~ev~V~~~~~~~~~~~~lva~a~~T~~~~ 134 (154)
T PLN02322 70 RVAGIQLSINHLKSADLGDLVFAEATPVS---TGK-TIQVWEVKLWKTTDKDKANKILISSSRVTLICN 134 (154)
T ss_pred ceEEEEEEEEEeccCCCCCEEEEEEEEEe---cCC-CEEEEEEEEEECCCCcccCCeEEEEEEEEEEEc
Confidence 35777889999999999999999997653 222 234455555431 1 378999999998653
No 113
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=90.81 E-value=2.7 Score=41.34 Aligned_cols=60 Identities=10% Similarity=0.083 Sum_probs=47.8
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEec
Q 021623 93 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRG 157 (310)
Q Consensus 93 ~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg 157 (310)
+.+-.+.+++|++|++.||++++++++..+.. ..+.++.+++ +++|+++++..++++.-.
T Consensus 395 ~~vvv~~~i~y~rp~~~gD~v~I~t~v~~~~~----~s~~~~~~i~-~~~g~l~A~g~~~~v~vD 454 (495)
T PRK07531 395 SYYTVETHIRHLGEAKAGQALHVETQLLSGDE----KRLHLFHTLY-DAGGELIATAEHMLLHVD 454 (495)
T ss_pred cEEEEEEEEEEcccCCCCCEEEEEEEEEecCC----cEEEEEEEEE-CCCCcEEEEEEEEEEEEE
Confidence 44567999999999999999999999987753 2345566655 578999999999888754
No 114
>TIGR00051 acyl-CoA thioester hydrolase, YbgC/YbaW family. This model describes a subset of related acyl-CoA thioesterases that include several at least partially characterized proteins. YbgC is an acyl-CoA thioesterase associated with the Tol-Pal system. YbaW is part of the FadM regulon.
Probab=90.81 E-value=2.5 Score=32.06 Aligned_cols=48 Identities=10% Similarity=0.092 Sum_probs=33.0
Q ss_pred ceEEEEEEEECcCCCCCCEEEEEEEEEC---cEEEEEEE-EecCCcEEEEEE
Q 021623 253 NMVKNIFSRFLLHVYPGETLVTEMWLQG---LRVIYQVK-VKERNRSALSGF 300 (310)
Q Consensus 253 ~~~~~~~~rf~~Pv~~gd~l~~~~~~~~---~~v~~~~~-~~~~g~~vl~g~ 300 (310)
..+...+++|.+|+..||++.++.++.+ ..+.+... .+++|+.+..+.
T Consensus 49 ~~v~~~~i~y~~~~~~gd~v~v~~~~~~~~~~s~~~~~~i~~~~~~~~~~~~ 100 (117)
T TIGR00051 49 FVVVNINIEYKKPARLDDVLEIRTQIEELNGFSFVFSQEIFNEDEALLKAAT 100 (117)
T ss_pred EEEEEEEEEECCcccCCCEEEEEEEEEecCcEEEEEEEEEEeCCCcEEEeeE
Confidence 4567889999999999999999999843 23444433 344555544443
No 115
>TIGR02447 yiiD_Cterm thioesterase domain, putative. This family consists of a broadly distributed uncharacterized domain found often as a standalone protein. The member from Shewanella oneidensis, PDB|1T82_A (Forouhar, et al., unpublished) is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an Acetyltransf_1 domain (PFAM model pfam00583). The function of this protein is unknown.
Probab=89.90 E-value=5.2 Score=32.08 Aligned_cols=52 Identities=15% Similarity=0.061 Sum_probs=34.1
Q ss_pred ceEEEEEEEECcCCCCCCEEEEEEEE------------ECc--EEEEEEEEecCCcEEEEEEEEEE
Q 021623 253 NMVKNIFSRFLLHVYPGETLVTEMWL------------QGL--RVIYQVKVKERNRSALSGFVDVH 304 (310)
Q Consensus 253 ~~~~~~~~rf~~Pv~~gd~l~~~~~~------------~~~--~v~~~~~~~~~g~~vl~g~a~v~ 304 (310)
....+.+++|.+|+.-+-..++++.. .+| .+.+++.+.++|+.|.+++.+..
T Consensus 70 ~vt~~~~i~yl~P~~~~~~a~~~~~~~~~~~~~~~~l~~~gr~~~~~~~~v~~~~~lvA~~~g~~~ 135 (138)
T TIGR02447 70 IVIADSHIRYLAPVTGDPVANCEAPDLESWEAFLATLQRGGKARVKLEAQISSDGKLAATFSGEYV 135 (138)
T ss_pred EEEEEeeeEEcCCcCCCeEEEEEcCCHHHHHHHHHHHHhCCceEEEEEEEEEECCEEEEEEEEEEE
Confidence 34467899999999864344555421 222 45566666678898888877664
No 116
>COG1607 Acyl-CoA hydrolase [Lipid metabolism]
Probab=88.68 E-value=4.3 Score=33.42 Aligned_cols=60 Identities=10% Similarity=0.005 Sum_probs=39.5
Q ss_pred EEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEecc
Q 021623 99 QYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGA 158 (310)
Q Consensus 99 ~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg~ 158 (310)
.++.|.+|++.||.|.+.+++..+-...--+.+++..+-...+.-..+.+..-+++....
T Consensus 62 d~v~F~~Pv~vGd~v~~~a~v~~~GrTSm~V~Vev~~~~~~~~~~~~~t~~~ft~VAvd~ 121 (157)
T COG1607 62 DSVDFKKPVRVGDIVCLYARVVYTGRTSMEVGVEVWAEDIRSGERRLATSAYFTFVAVDE 121 (157)
T ss_pred ceEEEccccccCcEEEEEEEEeecCcccEEEEEEEEEecccCCcceEeeeEEEEEEEECC
Confidence 578999999999999999999876544322333443332223344566677777776544
No 117
>KOG3328 consensus HGG motif-containing thioesterase [General function prediction only]
Probab=88.10 E-value=4.7 Score=32.69 Aligned_cols=76 Identities=17% Similarity=0.131 Sum_probs=49.3
Q ss_pred ceechHHHHHHHHHHHHHHh--h-cCCCceEEEEEEEECcCCCCCCEEEEEEEEE--CcEE---EEEEEEecCCcEEEEE
Q 021623 228 PILHGLCTMGFAVRAIIKFI--C-RGDPNMVKNIFSRFLLHVYPGETLVTEMWLQ--GLRV---IYQVKVKERNRSALSG 299 (310)
Q Consensus 228 ~i~hG~~~~~~~~~~~~~~~--~-~g~~~~~~~~~~rf~~Pv~~gd~l~~~~~~~--~~~v---~~~~~~~~~g~~vl~g 299 (310)
-.+||-+++.++-..-.... . +..+..-..+++.|.+|..+||.|.++.... |..+ .++.+.+.+|++...|
T Consensus 54 k~LHGG~tAtLvD~i~s~~~~~~~~~~~gvsvdLsvsyL~~AklGe~l~i~a~~vr~Gk~la~t~v~l~~K~t~kiia~g 133 (148)
T KOG3328|consen 54 KTLHGGATATLVDLITSAALLMTSGFKPGVSVDLSVSYLSSAKLGEELEIEATVVRVGKTLAFTDVELRRKSTGKIIAKG 133 (148)
T ss_pred ccccccchhhHHHHHhhHHHHhccCCCCceEEEEEhhhccccCCCCeEEEEEEEeecCceEEEEEEEEEEcCCCeEEEec
Confidence 35788777777653322211 1 2233444678899999999999999998873 4333 3334456679998887
Q ss_pred EEEE
Q 021623 300 FVDV 303 (310)
Q Consensus 300 ~a~v 303 (310)
+.+-
T Consensus 134 rhtk 137 (148)
T KOG3328|consen 134 RHTK 137 (148)
T ss_pred ceEE
Confidence 7643
No 118
>PF02551 Acyl_CoA_thio: Acyl-CoA thioesterase; InterPro: IPR003703 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH). They consequently have the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. They may also be involved in the metabolic regulation of peroxisome proliferation. Thioesters play a central role in cells as they participate in metabolism, membrane synthesis, signal transduction, and gene regulation. Thioesterases catalyse the hydrolysis of thioesters to the thiol and carboxylic acid components. Many thioesterases have a hot dog fold, including YciA from Escherichia coli and its close sequence homologue HI0827 from Haemophilus influenzae (HiYciA) []. In Helicobacter pylori, YbgC also belongs to the hot-dog family of proteins, with a epsilongamma tetrameric arrangement []. YbgC proteins are bacterial acyl-CoA thioesterases associated with the Tol-Pal system. This system is important for cell envelope integrity and is part of the cell division machinery. However, the E. coli thioesterase II reveals a new tertiary fold: a 'double hot dog'. It has an internal repeat with a basic unit that is structurally similar to the recently described beta-hydroxydecanoyl thiol ester dehydrase []. ; GO: 0016291 acyl-CoA thioesterase activity, 0006637 acyl-CoA metabolic process; PDB: 1C8U_B 1TBU_B 3U0A_B.
Probab=87.24 E-value=7.1 Score=31.08 Aligned_cols=58 Identities=12% Similarity=0.161 Sum_probs=36.5
Q ss_pred CCCceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEc-CCeEEEEEEEEEEECCCCcEEEEEEEE
Q 021623 89 HDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDK-GKAAILEIETKSYNAESGELLCMNRMT 152 (310)
Q Consensus 89 ~~~~~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k-~~G~~v~~~~~~~~~~~Ge~v~~~~~t 152 (310)
.+-..+ -..+++-||||++.+|.|....+ +-.-. ++| -++.+.+.+++|++|++..+.
T Consensus 71 ~~~~~v-SlDHs~wFHrpfr~ddWlLY~~~--sp~A~~~Rg---l~~G~~f~~q~G~Lvas~~QE 129 (131)
T PF02551_consen 71 FPKFQV-SLDHSMWFHRPFRADDWLLYAIE--SPSASGGRG---LVRGRFFDTQDGELVASVVQE 129 (131)
T ss_dssp CCCEEE-EEEEEEEE-S--BTTS-EEEEEE--EEEEETTEE---EEEECCEEECTTEEEEEEEEE
T ss_pred ccccEE-ecceeEEEcCCCCCCCCEEEEEE--cCccccCcc---cccCceEecCCCCEEEEEecC
Confidence 334444 78899999999999998876544 33333 345 344554437999999997765
No 119
>PRK10694 acyl-CoA esterase; Provisional
Probab=86.90 E-value=5.1 Score=32.00 Aligned_cols=56 Identities=11% Similarity=0.070 Sum_probs=35.9
Q ss_pred EEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEE-----CCCCc--EEEEEEEEEEEecc
Q 021623 99 QYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYN-----AESGE--LLCMNRMTAFLRGA 158 (310)
Q Consensus 99 ~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~-----~~~Ge--~v~~~~~t~~~rg~ 158 (310)
..+.|++|++.||.++++++|..+-.+. ++++.+++. +..|+ ++.+...+++.-..
T Consensus 60 d~i~F~~Pv~~Gd~l~~~a~V~~~g~sS----~~v~v~v~~~~~~~~~~g~~~~~~~~~~tfVavd~ 122 (133)
T PRK10694 60 EGMTFLRPVAVGDVVCCYARCVKTGTTS----ISINIEVWVKKVASEPIGQRYKATEALFTYVAVDP 122 (133)
T ss_pred CceEECCCcccCcEEEEEEEEEEccCce----EEEEEEEEEeecccCCCCcEEEEEEEEEEEEEECC
Confidence 4679999999999999999997665442 222222221 11233 46677778776543
No 120
>PRK05174 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; Validated
Probab=86.80 E-value=7.5 Score=32.55 Aligned_cols=58 Identities=10% Similarity=0.051 Sum_probs=41.9
Q ss_pred eeeeeEEEEEeccCCCCcE-EEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEE
Q 021623 94 LLHGQQYMELYKPFPSSAS-IRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 154 (310)
Q Consensus 94 ~vH~~~~~~~~~Pl~~gd~-l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~ 154 (310)
.+-+-.+++|++++.+||+ ++.++++..+....++ +...+..++ .+|+++++...--+
T Consensus 105 ~l~g~~~~kfr~~v~Pgd~~l~l~v~i~~~~~~~~~-~~~~~~~i~--v~g~~va~a~~~~l 163 (172)
T PRK05174 105 RALGVGEVKFTGQVLPTAKKVTYEIDIKRVINRKLV-MGIADGRVL--VDGEEIYTAKDLKV 163 (172)
T ss_pred EEeeccEEEECccCcCCCEEEEEEEEEEEEecCCCC-EEEEEEEEE--ECCEEEEEEEeeEE
Confidence 3445678999999999998 8999999888553233 345555554 47899988865443
No 121
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=86.08 E-value=5.3 Score=35.69 Aligned_cols=60 Identities=12% Similarity=0.207 Sum_probs=43.7
Q ss_pred ceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEe
Q 021623 92 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLR 156 (310)
Q Consensus 92 ~~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~r 156 (310)
....-..+.+.||+|++.++.+..+.+..... .|+| ..+.+++ +++|++|++..+.-++|
T Consensus 212 ~~~aSldhtv~fh~~~~~~~W~l~~~~s~~~~-~Grg---~~~~~l~-d~~G~lvAs~~Qe~l~r 271 (271)
T TIGR00189 212 SMAASLDHSIWFHRPFRADDWLLYKCSSPSAS-GSRG---LVEGKIF-TRDGVLIASTVQEGLVR 271 (271)
T ss_pred cEEEeeeeeEEEeCCCCCCeeEEEEEEecccc-CCce---EEEEEEE-CCCCCEEEEEEeeeecC
Confidence 34467889999999988999887776654432 2334 3445654 79999999999987764
No 122
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=85.25 E-value=5 Score=36.46 Aligned_cols=59 Identities=12% Similarity=0.170 Sum_probs=43.7
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEec
Q 021623 94 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRG 157 (310)
Q Consensus 94 ~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg 157 (310)
..-..+.+.||+|++++|.+-.+.+..... .++| ..+.+++ +++|++|++..+..++|.
T Consensus 226 ~aSLdhsi~Fh~~~~~d~W~L~~~~s~~a~-~gr~---~~~g~i~-~~~G~LvAs~~Qegl~r~ 284 (286)
T PRK10526 226 IATIDHSMWFHRPFNLNEWLLYSVESTSAS-SARG---FVRGEFY-TQDGVLVASTVQEGVMRN 284 (286)
T ss_pred EEeeeEeEEEeCCCCCCceEEEEEECCccc-CCce---EEEEEEE-CCCCCEEEEEEeeEEEEe
Confidence 456789999999999999888766544331 2233 3344654 799999999999988874
No 123
>cd01289 FabA_like Domain of unknown function, appears to be related to a diverse group of beta-hydroxydecanoyl ACP dehydratases (FabA) and beta-hydroxyacyl ACP dehydratases (FabZ). This group appears to lack the conserved active site histidine of FabA and FabZ.
Probab=85.07 E-value=11 Score=30.16 Aligned_cols=58 Identities=14% Similarity=0.073 Sum_probs=41.5
Q ss_pred eeeeeeEEEEEeccCCC-CcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021623 93 LLLHGQQYMELYKPFPS-SASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 155 (310)
Q Consensus 93 ~~vH~~~~~~~~~Pl~~-gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 155 (310)
+.+=+-.+++|++|+.+ ||+|+.++++..... +| +..++.+++ .+|+++++.+.+++.
T Consensus 78 g~l~~i~~~~f~~~v~p~Gd~l~i~~~~~~~~~--~~-~~~~~~~~~--v~~~~va~a~l~~~~ 136 (138)
T cd01289 78 GFLLGSRKYEAHVDRFDLGSTLLIVVAELLQGD--SG-LGVFECTIE--DQGGVLASGRLNVYQ 136 (138)
T ss_pred EEEEEEEEEEEEcceeCCCCeeEEEeeeeeeCC--Cc-EEEEEEEEE--ECCEEEEEEEEEEEc
Confidence 45666689999999766 999999888766543 23 234444543 368999999988765
No 124
>TIGR02447 yiiD_Cterm thioesterase domain, putative. This family consists of a broadly distributed uncharacterized domain found often as a standalone protein. The member from Shewanella oneidensis, PDB|1T82_A (Forouhar, et al., unpublished) is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an Acetyltransf_1 domain (PFAM model pfam00583). The function of this protein is unknown.
Probab=84.98 E-value=2.6 Score=33.80 Aligned_cols=58 Identities=14% Similarity=0.143 Sum_probs=40.5
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEE----------EEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021623 93 LLLHGQQYMELYKPFPSSASIRNEACIAG----------LHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 155 (310)
Q Consensus 93 ~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~----------v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 155 (310)
..|=.+.++.|++|++.+ +.+++++.+ +..++++ .+.++.+++ ++|+++++.+.++++
T Consensus 69 ~~vt~~~~i~yl~P~~~~--~~a~~~~~~~~~~~~~~~~l~~~gr~-~~~~~~~v~--~~~~lvA~~~g~~~~ 136 (138)
T TIGR02447 69 DIVIADSHIRYLAPVTGD--PVANCEAPDLESWEAFLATLQRGGKA-RVKLEAQIS--SDGKLAATFSGEYVA 136 (138)
T ss_pred cEEEEEeeeEEcCCcCCC--eEEEEEcCCHHHHHHHHHHHHhCCce-EEEEEEEEE--ECCEEEEEEEEEEEE
Confidence 467779999999999864 666666633 2334444 345666655 477999999999876
No 125
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=84.45 E-value=6.4 Score=38.74 Aligned_cols=51 Identities=14% Similarity=-0.003 Sum_probs=38.5
Q ss_pred eEEEEEEEECcCCCCCCEEEEEEEEEC---cEEEEEEE-EecCCcEEEEEEEEEE
Q 021623 254 MVKNIFSRFLLHVYPGETLVTEMWLQG---LRVIYQVK-VKERNRSALSGFVDVH 304 (310)
Q Consensus 254 ~~~~~~~rf~~Pv~~gd~l~~~~~~~~---~~v~~~~~-~~~~g~~vl~g~a~v~ 304 (310)
.+.+.+++|.+|++.||+++++.++.+ ..+.+... .+++|+++.+|+....
T Consensus 397 vvv~~~i~y~rp~~~gD~v~I~t~v~~~~~~s~~~~~~i~~~~g~l~A~g~~~~v 451 (495)
T PRK07531 397 YTVETHIRHLGEAKAGQALHVETQLLSGDEKRLHLFHTLYDAGGELIATAEHMLL 451 (495)
T ss_pred EEEEEEEEEcccCCCCCEEEEEEEEEecCCcEEEEEEEEECCCCcEEEEEEEEEE
Confidence 457889999999999999999999843 24454444 3567888888876544
No 126
>PLN02868 acyl-CoA thioesterase family protein
Probab=83.99 E-value=7.3 Score=37.29 Aligned_cols=78 Identities=15% Similarity=0.161 Sum_probs=57.2
Q ss_pred ceechHHHHHHHHHHHHHHhhcCCCceEEEEEEEECcCCCCCCEEEEEEEE--ECc-EEEEEEEEecCCcEEEEEEEEEE
Q 021623 228 PILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWL--QGL-RVIYQVKVKERNRSALSGFVDVH 304 (310)
Q Consensus 228 ~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~Pv~~gd~l~~~~~~--~~~-~v~~~~~~~~~g~~vl~g~a~v~ 304 (310)
.-++|-++++.+..+..... .+...+.++.+.|.+|-.++..+.+++++ +|. ....++...|+|+++++..+++.
T Consensus 158 ~~~fGG~~~aqal~Aa~~~~--~~~~~~~s~~~~Fl~~~~~~~pv~~~V~~lr~Grs~~~r~v~~~Q~g~~~~~~~~sf~ 235 (413)
T PLN02868 158 GKVFGGQLVGQALAAASKTV--DPLKLVHSLHAYFLLVGDINLPIIYQVERIRDGHNFATRRVDAIQKGKVIFTLFASFQ 235 (413)
T ss_pred ccccchHHHHHHHHHHHccC--CCCCCceEeeeeecCCCCCCCCEEEEEEEEcCCCceEeeEEEEEECCeeEEEEeeccc
Confidence 44799999998877666543 23456789999999888887778888776 343 33445556789999999998877
Q ss_pred ecc
Q 021623 305 RLA 307 (310)
Q Consensus 305 ~p~ 307 (310)
.+.
T Consensus 236 ~~~ 238 (413)
T PLN02868 236 KEE 238 (413)
T ss_pred cCC
Confidence 653
No 127
>COG0764 FabA 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism]
Probab=83.95 E-value=13 Score=30.36 Aligned_cols=59 Identities=8% Similarity=0.066 Sum_probs=41.7
Q ss_pred ceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021623 92 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 155 (310)
Q Consensus 92 ~~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 155 (310)
.....+=+..+|.+|+.|||.+..+.++...+...-+ ....+. ..||++|++.......
T Consensus 85 ~~~~~gid~~kF~~~V~PGd~l~l~~~~~~~~~~~~~---~~~~~a--~Vdg~~v~~a~~~~~~ 143 (147)
T COG0764 85 LGYFLGIDNAKFKRPVLPGDQLELEVKLLKSRRLGIG---KAKGVA--TVDGKVVAEAELLFAG 143 (147)
T ss_pred EEEEEEecceeecCccCCCCEEEEEEEEEEecccceE---EEEEEE--EECCEEEEEEEEEEEE
Confidence 5567888999999999999998888877665533222 233332 2479998888776654
No 128
>TIGR01749 fabA beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA. This enzyme, FabA, shows overlapping substrate specificity with FabZ with regard to chain length in fatty acid biosynthesis. It is commonly designated 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) as if it were specific for that chain length, but its specificity is broader; it is active even in the initiation of fatty acid biosynthesis. This enzyme can also isomerize trans-2-decenoyl-ACP to cis-3-decenoyl-ACP to bypass reduction by FabI and instead allow biosynthesis of unsaturated fatty acids. FabA cannot elongate unsaturated fatty acids.
Probab=83.80 E-value=8.7 Score=32.06 Aligned_cols=56 Identities=7% Similarity=0.003 Sum_probs=40.1
Q ss_pred eeeeEEEEEeccCCCCcEE-EEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEE
Q 021623 95 LHGQQYMELYKPFPSSASI-RNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTA 153 (310)
Q Consensus 95 vH~~~~~~~~~Pl~~gd~l-~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~ 153 (310)
+=+-.+++|++|+.+||++ +.++++..+....++ +..++.+++ .+|+++++.+.--
T Consensus 103 l~gi~~~kfr~~v~Pgd~~~~l~v~i~~~~~~~~~-~~~~~~~i~--v~g~~va~a~~~~ 159 (169)
T TIGR01749 103 ALGVGEVKFTGQVLPTAKKVTYRIHFKRVINRRLV-MGIADGEVL--VDGRLIYTASDLR 159 (169)
T ss_pred EeeccEEEEccCEecCCeEEEEEEEEEEEeecCCc-EEEEEEEEE--ECCEEEEEEECCE
Confidence 3344699999999999997 889888887655434 345555553 4788988866543
No 129
>cd03444 Thioesterase_II_repeat1 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=83.21 E-value=9.3 Score=28.93 Aligned_cols=58 Identities=12% Similarity=0.099 Sum_probs=38.4
Q ss_pred ceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEE
Q 021623 92 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 154 (310)
Q Consensus 92 ~~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~ 154 (310)
....=..+.+.||+|....+-+..+.+..... .| ....+.+++ +++|++|++..+.-+
T Consensus 46 ~~~aSldhsi~Fh~~~~~~~W~l~~~~~~~~~---~g-r~~~~~~l~-~~~G~LvAs~~Q~~l 103 (104)
T cd03444 46 SASASLDHAIWFHRPFRADDWLLYEQRSPRAG---NG-RGLVEGRIF-TRDGELVASVAQEGL 103 (104)
T ss_pred cceEeeeEEEEEeCCCCCCceEEEEEECcccc---CC-eeEEEEEEE-CCCCCEEEEEEEeee
Confidence 34456689999999988766555554433222 12 234555655 789999999988754
No 130
>PF14539 DUF4442: Domain of unknown function (DUF4442); PDB: 1YOC_B 1SH8_B.
Probab=80.09 E-value=6.9 Score=31.04 Aligned_cols=57 Identities=14% Similarity=0.260 Sum_probs=35.3
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEE
Q 021623 94 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 154 (310)
Q Consensus 94 ~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~ 154 (310)
.+--+-+++|++| .-+.+++++++..-.. +.....++...++ |.+|+.|++.+.+..
T Consensus 75 ~~~k~~~i~f~kp--a~g~v~a~~~~~~e~~-~~~~~~~~~v~i~-D~~G~~Va~~~~t~~ 131 (132)
T PF14539_consen 75 VWDKSAEIDFLKP--ARGDVTATAELTEEQI-GERGELTVPVEIT-DADGEVVAEATITWY 131 (132)
T ss_dssp EEEEEEEEEE-S-----S-EEEEEE-TCCHC-CHEEEEEEEEEEE-ETTC-EEEEEEEEEE
T ss_pred EEEEeeEEEEEec--cCCcEEEEEEcCHHHh-CCCcEEEEEEEEE-ECCCCEEEEEEEEEE
Confidence 3456889999998 6678888888877322 3233466676754 799999999988764
No 131
>PLN02647 acyl-CoA thioesterase
Probab=76.27 E-value=20 Score=34.75 Aligned_cols=61 Identities=13% Similarity=0.154 Sum_probs=41.1
Q ss_pred eEEEEEeccCCCCcEEEEEEEEEEEEEcCCe---EEEEEEEEEEEC--CCCcEEEEEEEEEEEecc
Q 021623 98 QQYMELYKPFPSSASIRNEACIAGLHDKGKA---AILEIETKSYNA--ESGELLCMNRMTAFLRGA 158 (310)
Q Consensus 98 ~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G---~~v~~~~~~~~~--~~Ge~v~~~~~t~~~rg~ 158 (310)
=.++.|++|++.||-|.++++|.-......| .-+.+...+... ..++++.+...|++....
T Consensus 338 vd~v~F~~PV~vGdil~l~A~V~yt~~~s~g~~~i~veV~v~v~~~~~~~~~~~n~~~fTfva~d~ 403 (437)
T PLN02647 338 VDHVDFLRPVDVGDFLRFKSCVLYTELENSEQPLINVEVVAHVTRPELRSSEVSNTFYFTFTVRPE 403 (437)
T ss_pred ecceEecCccccCcEEEEEEEEEEEeEEecCceEEEEEEEEEEEcCCCCcceEEEEEEEEEEEecc
Confidence 3578999999999999999999887765433 223344433221 235567777788777543
No 132
>PF03756 AfsA: A-factor biosynthesis hotdog domain; InterPro: IPR005509 The AfsA family are key enzymes in A-factor biosynthesis, which is essential for streptomycin production and resistance. This domain is distantly related to the thioester dehydratase FabZ family and therefore has a Hotdog domain [].
Probab=68.78 E-value=35 Score=26.74 Aligned_cols=51 Identities=10% Similarity=0.092 Sum_probs=37.8
Q ss_pred eEEEEEEEECcCCCCCCEEEEEEEEE------Cc--EEEEEEEEecCCcEEEEEEEEEE
Q 021623 254 MVKNIFSRFLLHVYPGETLVTEMWLQ------GL--RVIYQVKVKERNRSALSGFVDVH 304 (310)
Q Consensus 254 ~~~~~~~rf~~Pv~~gd~l~~~~~~~------~~--~v~~~~~~~~~g~~vl~g~a~v~ 304 (310)
.+.+++++|.+++...-.+.+++... ++ ...+.+.+.|+|+.+.++++++.
T Consensus 73 ~~~~l~~~f~~~~e~~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~q~g~~~a~~~~~~t 131 (132)
T PF03756_consen 73 VLTSLDFTFSRFAELDVPADLTVRITCRDRRGGRPRGLRFRVTVSQGGRVVATASMTFT 131 (132)
T ss_pred EEEEEEEEEccccccCCCEEEEEEEEeccccCCccceEEEEEEEEECCEEEEEEEEEEE
Confidence 56789999999997776777776652 11 35566667899999999988753
No 133
>KOG3328 consensus HGG motif-containing thioesterase [General function prediction only]
Probab=67.15 E-value=63 Score=26.29 Aligned_cols=61 Identities=18% Similarity=0.265 Sum_probs=45.9
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCe-EEEEEEEEEEECCCCcEEEEEEEEEEEecc
Q 021623 93 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKA-AILEIETKSYNAESGELLCMNRMTAFLRGA 158 (310)
Q Consensus 93 ~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G-~~v~~~~~~~~~~~Ge~v~~~~~t~~~rg~ 158 (310)
..+-.+-++.|+.|-+.||.|..++++..+ |+. .+..++. +...+|+..+..+-+.+.+..
T Consensus 81 ~gvsvdLsvsyL~~AklGe~l~i~a~~vr~---Gk~la~t~v~l--~~K~t~kiia~grhtk~~~~~ 142 (148)
T KOG3328|consen 81 PGVSVDLSVSYLSSAKLGEELEIEATVVRV---GKTLAFTDVEL--RRKSTGKIIAKGRHTKYFRPA 142 (148)
T ss_pred CceEEEEEhhhccccCCCCeEEEEEEEeec---CceEEEEEEEE--EEcCCCeEEEecceEEEeecC
Confidence 346777888999999999999999998754 333 3344443 345689999999999888754
No 134
>PF12119 DUF3581: Protein of unknown function (DUF3581); InterPro: IPR021974 This family consists of uncharacterised bacterial proteins.
Probab=61.05 E-value=11 Score=32.27 Aligned_cols=46 Identities=11% Similarity=0.104 Sum_probs=33.6
Q ss_pred ceEEechhHHHHHHhhcCCCCCCCCCcccccceeeccCcCCccccc--eeeeccccCC
Q 021623 21 KTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLP--TFSALFSFEL 76 (310)
Q Consensus 21 ~~~~vt~~~i~~yA~avG~~~~~Pl~~d~~~~~~~~~g~~~~~apP--tf~~~l~~~~ 76 (310)
..+.+|+++.-.||+-|-. |.||+|.-|. +-|++|- .|+++|..-+
T Consensus 12 ~~v~is~~QAS~FAK~VAg-DFNPIHD~Da---------KRFCVPGDLLFalvL~~~G 59 (218)
T PF12119_consen 12 GSVSISAEQASRFAKEVAG-DFNPIHDPDA---------KRFCVPGDLLFALVLAKYG 59 (218)
T ss_pred CEEEEcHHHHhHHHHHhcc-CCCccCCCCC---------ccccCccHHHHHHHHHhcC
Confidence 4789999999999999986 9999975332 2355665 4666666544
No 135
>PLN02370 acyl-ACP thioesterase
Probab=60.54 E-value=65 Score=31.02 Aligned_cols=51 Identities=8% Similarity=-0.025 Sum_probs=37.3
Q ss_pred ceEEEEEEEECcCCCCCCEEEEEEEEEC--c-E--EEEEEEEecCCcEEEEEEEEE
Q 021623 253 NMVKNIFSRFLLHVYPGETLVTEMWLQG--L-R--VIYQVKVKERNRSALSGFVDV 303 (310)
Q Consensus 253 ~~~~~~~~rf~~Pv~~gd~l~~~~~~~~--~-~--v~~~~~~~~~g~~vl~g~a~v 303 (310)
..+.+++++|.+|...||+|+++.|..+ + . ..|.+...++|+.+..+....
T Consensus 197 WVLtr~~I~~~R~P~~gD~V~V~Twv~~~~k~~~~Rdf~I~D~~~Ge~la~A~SvW 252 (419)
T PLN02370 197 WVVTRMQVLVDRYPTWGDVVQVDTWVSASGKNGMRRDWLVRDCKTGETLTRASSVW 252 (419)
T ss_pred EEEEEEEEEeCcCCCCCCEEEEEEEEeeCCCCEEEEEEEEEECCCCeEEEEEEEEE
Confidence 3457899999999999999999999853 2 2 234433234799988887654
No 136
>PLN02868 acyl-CoA thioesterase family protein
Probab=59.55 E-value=28 Score=33.29 Aligned_cols=56 Identities=18% Similarity=0.211 Sum_probs=40.0
Q ss_pred eeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEE
Q 021623 94 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 154 (310)
Q Consensus 94 ~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~ 154 (310)
..-..+.+.||+|+..+|.+..+.+..... .+++ ..+.+++ +++|++|++..+..+
T Consensus 357 ~aSLdhsi~Fh~~~~~d~W~l~~~~s~~a~-~gr~---~~~g~l~-~~~G~LvAs~~Qe~l 412 (413)
T PLN02868 357 ALSLDHSMWFHRPFRADDWLLFVIVSPAAH-NGRG---FATGHMF-NRKGELVVSLTQEAL 412 (413)
T ss_pred EEEcceeEEEecCCCCCceEEEEEECCccC-CCcc---eEEEEEE-CCCCCEEEEEEeeec
Confidence 456678999999999999887766554441 2233 3445654 799999999987643
No 137
>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B.
Probab=56.15 E-value=89 Score=27.26 Aligned_cols=56 Identities=21% Similarity=0.290 Sum_probs=36.7
Q ss_pred eeeeEEEEEe-ccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021623 95 LHGQQYMELY-KPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 155 (310)
Q Consensus 95 vH~~~~~~~~-~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 155 (310)
.-...++.|+ .|...++.+-++.+...+. .|++ ..+.+++ +++|++|++..+..++
T Consensus 199 ~tld~ti~f~~~p~~~~~Wl~~~~~~~~~~-~Gr~---~~~~~l~-d~~G~lvA~~~Q~~lv 255 (255)
T PF13622_consen 199 ATLDHTIHFHRLPFDGDEWLLLEARSPRAG-NGRA---LMEGRLW-DEDGRLVASSRQEALV 255 (255)
T ss_dssp EEEEEEEEECSHCCTTTS-EEEEEEEEEEE-TTEE---EEEEEEE-ETTS-EEEEEEEEEE-
T ss_pred ccceeEEEEEeCCccCCceEEEEEEEeEeC-CCEE---EEEEEEE-CCCCCEEEEEEEEeeC
Confidence 3667777764 4666688888888665554 2222 4555655 7899999999988663
No 138
>PF09500 YiiD_Cterm: Putative thioesterase (yiiD_Cterm); InterPro: IPR012660 This entry consists of a broadly distributed uncharacterised domain found often as a standalone protein. The member from is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an N-terminal acetyltransferase domain (IPR000182 from INTERPRO). The function of these proteins are unknown. ; PDB: 1T82_C.
Probab=55.24 E-value=93 Score=25.21 Aligned_cols=79 Identities=13% Similarity=0.007 Sum_probs=36.7
Q ss_pred CCCCceechHHHHHHHHHHHHHHhhc-CCCceEEEEEEEECcCCCCCCEEEEEEEE------------ECc--EEEEEEE
Q 021623 224 GFSRPILHGLCTMGFAVRAIIKFICR-GDPNMVKNIFSRFLLHVYPGETLVTEMWL------------QGL--RVIYQVK 288 (310)
Q Consensus 224 gf~~~i~hG~~~~~~~~~~~~~~~~~-g~~~~~~~~~~rf~~Pv~~gd~l~~~~~~------------~~~--~v~~~~~ 288 (310)
.|++.|.--+-..+|.+-.+.-...+ .....+..-+++|.+||.-.=+.++.... .++ ++.+.+.
T Consensus 46 ~FgGSl~slatLaGW~lv~l~l~e~~~~~~IVi~~~~i~Y~~Pv~~d~~A~~~~~~~~~~~~~~~~l~~~grari~l~~~ 125 (144)
T PF09500_consen 46 MFGGSLYSLATLAGWGLVWLQLKEAGLNGDIVIADSNIRYLKPVTGDFTARCSLPEPEDWERFLQTLARGGRARITLEVE 125 (144)
T ss_dssp B-HHHHHHHHHHHHHHHHHHHHHHHT---EEEEEEEEEEE-S---S--EEEEE-------S---GGGGCTS-EEEEEEEE
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeCceEEcCCCCCCcEEEEeccccchhHHHHHHHHcCCcEEEEEEEE
Confidence 45555555555555554222211111 12334567789999999876555555441 123 5566666
Q ss_pred EecCCcEEEEEEEE
Q 021623 289 VKERNRSALSGFVD 302 (310)
Q Consensus 289 ~~~~g~~vl~g~a~ 302 (310)
+-.+|+.+.+-+.+
T Consensus 126 i~~~~~~~a~f~G~ 139 (144)
T PF09500_consen 126 IYSGGELAAEFTGR 139 (144)
T ss_dssp EEETTEEEEEEEEE
T ss_pred EEECCEEEEEEEEE
Confidence 66678877764443
No 139
>PF14765 PS-DH: Polyketide synthase dehydratase; PDB: 3KG7_D 3KG9_A 3KG8_B 3HRR_A 3HRQ_A 3EL6_A 3KG6_B 2VZ8_A 2VZ9_A.
Probab=51.52 E-value=99 Score=27.43 Aligned_cols=59 Identities=15% Similarity=0.256 Sum_probs=40.3
Q ss_pred eeeeeeEEEEEec-cCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEEe
Q 021623 93 LLLHGQQYMELYK-PFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLR 156 (310)
Q Consensus 93 ~~vH~~~~~~~~~-Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~r 156 (310)
.+-.+=.++.+++ |.+.++++.+.+++ .+..+..+.....++ |++|+++++...-.+.+
T Consensus 229 ~lP~~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~dv~v~-d~~G~~~~~~~gl~~~~ 288 (295)
T PF14765_consen 229 FLPVSIERIRIFRAPPPPGDRLYVYARL----VKSDDDTITGDVTVF-DEDGRVVAELEGLTFRR 288 (295)
T ss_dssp EEEEEEEEEEESSS--SSTSEEEEEEEE----ESTTTTEEEEEEEEE-ETTSBEEEEEEEEEEEE
T ss_pred EcccEeCEEEEEeccCCCCCEEEEEEEE----ecccceEEEEEEEEE-CCCCCEEEEEccEEEEE
Confidence 3444558899994 88999999999999 333333356666655 68999999888765543
No 140
>PF03756 AfsA: A-factor biosynthesis hotdog domain; InterPro: IPR005509 The AfsA family are key enzymes in A-factor biosynthesis, which is essential for streptomycin production and resistance. This domain is distantly related to the thioester dehydratase FabZ family and therefore has a Hotdog domain [].
Probab=51.23 E-value=1.1e+02 Score=23.74 Aligned_cols=59 Identities=10% Similarity=0.090 Sum_probs=40.2
Q ss_pred eeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEc-CCeEEEEEEEEEEECCCCcEEEEEEEEE
Q 021623 93 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDK-GKAAILEIETKSYNAESGELLCMNRMTA 153 (310)
Q Consensus 93 ~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k-~~G~~v~~~~~~~~~~~Ge~v~~~~~t~ 153 (310)
..+-.+-+++|.+++...-.++++..+..-..+ +...-..++.++ .|+|+++++...++
T Consensus 71 ~~~~~~l~~~f~~~~e~~~P~~~~~~~~~~~~~~~~~~~~~~~v~~--~q~g~~~a~~~~~~ 130 (132)
T PF03756_consen 71 QFVLTSLDFTFSRFAELDVPADLTVRITCRDRRGGRPRGLRFRVTV--SQGGRVVATASMTF 130 (132)
T ss_pred eEEEEEEEEEEccccccCCCEEEEEEEEeccccCCccceEEEEEEE--EECCEEEEEEEEEE
Confidence 456678899999988766677777777655444 222224455554 48999999988764
No 141
>PF10989 DUF2808: Protein of unknown function (DUF2808); InterPro: IPR021256 This family of proteins with unknown function appears to be restricted to Cyanobacteria.
Probab=50.70 E-value=79 Score=25.51 Aligned_cols=39 Identities=21% Similarity=0.174 Sum_probs=30.0
Q ss_pred EEEEEEECcCCCCCCEEEEEEEE-----ECcEEEEEEEEecCCc
Q 021623 256 KNIFSRFLLHVYPGETLVTEMWL-----QGLRVIYQVKVKERNR 294 (310)
Q Consensus 256 ~~~~~rf~~Pv~~gd~l~~~~~~-----~~~~v~~~~~~~~~g~ 294 (310)
..+.+.|..||-+|+++++.+.. .+|...|.+..-..|+
T Consensus 89 ~~i~I~f~~PV~pG~tv~V~l~~v~NP~~~G~Y~f~v~a~p~G~ 132 (146)
T PF10989_consen 89 RTITITFDEPVPPGTTVTVVLSPVRNPRSGGTYQFNVTAFPPGD 132 (146)
T ss_pred CEEEEEeCCCCCCCCEEEEEEEeeeCCCCCCeEEEEEEEECCCC
Confidence 56899999999999999999854 2467788877533444
No 142
>PF09500 YiiD_Cterm: Putative thioesterase (yiiD_Cterm); InterPro: IPR012660 This entry consists of a broadly distributed uncharacterised domain found often as a standalone protein. The member from is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an N-terminal acetyltransferase domain (IPR000182 from INTERPRO). The function of these proteins are unknown. ; PDB: 1T82_C.
Probab=46.73 E-value=1.6e+02 Score=23.91 Aligned_cols=60 Identities=13% Similarity=0.186 Sum_probs=34.9
Q ss_pred ceeeeeeEEEEEeccCCCCcEEEEEEEEE---EEEE---c--CCe-EEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021623 92 RLLLHGQQYMELYKPFPSSASIRNEACIA---GLHD---K--GKA-AILEIETKSYNAESGELLCMNRMTAFL 155 (310)
Q Consensus 92 ~~~vH~~~~~~~~~Pl~~gd~l~~~~~v~---~v~~---k--~~G-~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 155 (310)
..+|=.+.+++|++|+.-. +++++++. ++.. + .+| .-+.++++++ .+|+.+++-+..|+.
T Consensus 74 ~~IVi~~~~i~Y~~Pv~~d--~~A~~~~~~~~~~~~~~~~l~~~grari~l~~~i~--~~~~~~a~f~G~yv~ 142 (144)
T PF09500_consen 74 GDIVIADSNIRYLKPVTGD--FTARCSLPEPEDWERFLQTLARGGRARITLEVEIY--SGGELAAEFTGRYVA 142 (144)
T ss_dssp -EEEEEEEEEEE-S---S----EEEEE-------S---GGGGCTS-EEEEEEEEEE--ETTEEEEEEEEEEEE
T ss_pred CcEEEEeCceEEcCCCCCC--cEEEEeccccchhHHHHHHHHcCCcEEEEEEEEEE--ECCEEEEEEEEEEEE
Confidence 4678899999999999866 55555555 2211 1 122 5577777765 478889999988876
No 143
>COG1946 TesB Acyl-CoA thioesterase [Lipid metabolism]
Probab=43.77 E-value=1.3e+02 Score=27.49 Aligned_cols=79 Identities=14% Similarity=0.163 Sum_probs=53.8
Q ss_pred ceechHHHHHHHHHHHHHHhhcCCCceEEEEEEEECcCCCCCCEEEEEEEE--ECcE-EEEEEEEecCCcEEEEEEEEEE
Q 021623 228 PILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWL--QGLR-VIYQVKVKERNRSALSGFVDVH 304 (310)
Q Consensus 228 ~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~Pv~~gd~l~~~~~~--~~~~-v~~~~~~~~~g~~vl~g~a~v~ 304 (310)
.-+.|-.+.+.+.-+..+.. .+...+.++..-|.+|.-+-+.+...++. +|+. ..-+|..-|+|+++.+..|.+.
T Consensus 32 ~~vFGGqvvaQAL~Aa~~TV--~~~r~vhSlh~yFl~pgd~~~pi~y~Ve~lRdG~sfs~rrV~aiQ~g~~If~~~ASF~ 109 (289)
T COG1946 32 RRVFGGQVVAQALVAALRTV--PEDRVVHSLHSYFLRPGDPEQPIIYDVERLRDGRSFSTRRVDAIQHGKLIFSATASFQ 109 (289)
T ss_pred ccccccchHHHHHHHHHhhc--CCCCCcceehhhhcCCCCcCCceEEEEEeccCCCceEeEEEEEEECCEEEEEEEeecc
Confidence 34455556666554544443 23445577888999999999999999887 3433 3334545689999999999887
Q ss_pred eccC
Q 021623 305 RLAS 308 (310)
Q Consensus 305 ~p~~ 308 (310)
.+.-
T Consensus 110 ~~e~ 113 (289)
T COG1946 110 VPEE 113 (289)
T ss_pred CCCC
Confidence 6543
No 144
>PF01643 Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR002864 This entry represents various acyl-acyl carrier protein (ACP) thioesterases (TE) which terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid []. These proteins contain a duplication of two 4HBT-like domains.; GO: 0016790 thiolester hydrolase activity, 0006633 fatty acid biosynthetic process; PDB: 2ESS_A 2OWN_A.
Probab=41.38 E-value=1.9e+02 Score=25.58 Aligned_cols=52 Identities=12% Similarity=-0.014 Sum_probs=33.8
Q ss_pred ceEEEEEEEECcCCCCCCEEEEEEEEEC--cE---EEEEEEEecCCcEEEEEEEEEE
Q 021623 253 NMVKNIFSRFLLHVYPGETLVTEMWLQG--LR---VIYQVKVKERNRSALSGFVDVH 304 (310)
Q Consensus 253 ~~~~~~~~rf~~Pv~~gd~l~~~~~~~~--~~---v~~~~~~~~~g~~vl~g~a~v~ 304 (310)
..+.++.+++.++-..||+|+++.|..+ +. -.|.+...++|+++.++.....
T Consensus 61 Wvl~r~~i~i~r~P~~~e~i~i~Tw~~~~~~~~~~R~f~i~d~~~G~~l~~a~s~Wv 117 (261)
T PF01643_consen 61 WVLSRYQIEIHRYPRWGEKITIETWPSGFKRFFAYRDFEIYDAEDGELLARATSIWV 117 (261)
T ss_dssp EEEEEEEEEESS--BTT-EEEEEEEEEEE-SSEEEEEEEEE--TTS-EEEEEEEEEE
T ss_pred EEEEEEEEEEEecCCCCCEEEEEEEeccCCCcEEEEEEEEEECCCCcEEEEEEEEEE
Confidence 3557899999999999999999999854 22 2333332278999988876544
No 145
>COG5496 Predicted thioesterase [General function prediction only]
Probab=38.39 E-value=2e+02 Score=22.80 Aligned_cols=58 Identities=9% Similarity=0.138 Sum_probs=43.1
Q ss_pred ceeeeeeEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEEEE
Q 021623 92 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 155 (310)
Q Consensus 92 ~~~vH~~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~~~ 155 (310)
...|-.+-.++-..|+++|.+++..+++..+.-| +. .++.+. .++|+.+-+..-+-++
T Consensus 56 ~ttVG~ev~vrHla~~~~G~~V~i~~~l~~v~Gr--~v--~f~i~a--~~~~~~Ig~g~h~R~i 113 (130)
T COG5496 56 ETTVGTEVLVRHLAATPPGLTVTIGARLEKVEGR--KV--KFRIIA--MEGGDKIGEGTHTRVI 113 (130)
T ss_pred cceeeEEEEeeeccCCCCCCeEEEEEEEEEEecc--EE--EEEEEE--eeCCcEEeeeEEEEEE
Confidence 3457777888888999999999999999998755 43 333332 2578888888877555
No 146
>PF01835 A2M_N: MG2 domain; InterPro: IPR002890 The proteinase-binding alpha-macroglobulins (A2M) [] are large glycoproteins found in the plasma of vertebrates, in the hemolymph of some invertebrates and in reptilian and avian egg white. A2M-like proteins are able to inhibit all four classes of proteinases by a 'trapping' mechanism. They have a peptide stretch, called the 'bait region', which contains specific cleavage sites for different proteinases. When a proteinase cleaves the bait region, a conformational change is induced in the protein, thus trapping the proteinase. The entrapped enzyme remains active against low molecular weight substrates, whilst its activity toward larger substrates is greatly reduced, due to steric hindrance. Following cleavage in the bait region, a thiol ester bond, formed between the side chains of a cysteine and a glutamine, is cleaved and mediates the covalent binding of the A2M-like protein to the proteinase. This family includes the N-terminal region of the alpha-2-macroglobulin family. The inhibitor domains belong to MEROPS inhibitor family I39.; GO: 0004866 endopeptidase inhibitor activity; PDB: 2B39_B 3KLS_B 3PRX_C 3KM9_B 3PVM_C 3CU7_A 4E0S_A 4A5W_A 4ACQ_C 2P9R_B ....
Probab=35.73 E-value=1.1e+02 Score=22.38 Aligned_cols=41 Identities=17% Similarity=0.136 Sum_probs=24.1
Q ss_pred EEECcCCC-CCCEEEEEEEE--EC--------cEEEEEEEEecCCcEEEEEEE
Q 021623 260 SRFLLHVY-PGETLVTEMWL--QG--------LRVIYQVKVKERNRSALSGFV 301 (310)
Q Consensus 260 ~rf~~Pv~-~gd~l~~~~~~--~~--------~~v~~~~~~~~~g~~vl~g~a 301 (310)
+.--+|+| |||++.+++.. .. ..+.+.+ .+.+|+.+.....
T Consensus 4 i~TDr~iYrPGetV~~~~~~~~~~~~~~~~~~~~~~v~i-~dp~g~~v~~~~~ 55 (99)
T PF01835_consen 4 IQTDRPIYRPGETVHFRAIVRDLDNDFKPPANSPVTVTI-KDPSGNEVFRWSV 55 (99)
T ss_dssp EEESSSEE-TTSEEEEEEEEEEECTTCSCESSEEEEEEE-EETTSEEEEEEEE
T ss_pred EECCccCcCCCCEEEEEEEEeccccccccccCCceEEEE-ECCCCCEEEEEEe
Confidence 34457777 89999888774 22 1333333 3556776655444
No 147
>PF14539 DUF4442: Domain of unknown function (DUF4442); PDB: 1YOC_B 1SH8_B.
Probab=35.54 E-value=2.2e+02 Score=22.33 Aligned_cols=47 Identities=13% Similarity=0.052 Sum_probs=27.9
Q ss_pred EEEEEEEECcCCCCCCEEEEEEEEE----C--cEEEEEEE-EecCCcEEEEEEEEE
Q 021623 255 VKNIFSRFLLHVYPGETLVTEMWLQ----G--LRVIYQVK-VKERNRSALSGFVDV 303 (310)
Q Consensus 255 ~~~~~~rf~~Pv~~gd~l~~~~~~~----~--~~v~~~~~-~~~~g~~vl~g~a~v 303 (310)
.++.+++|.+| .-..|+++.... + ....+.+. .+.+|+.|.+++.++
T Consensus 77 ~k~~~i~f~kp--a~g~v~a~~~~~~e~~~~~~~~~~~v~i~D~~G~~Va~~~~t~ 130 (132)
T PF14539_consen 77 DKSAEIDFLKP--ARGDVTATAELTEEQIGERGELTVPVEITDADGEVVAEATITW 130 (132)
T ss_dssp EEEEEEEE-S-----S-EEEEEE-TCCHCCHEEEEEEEEEEEETTC-EEEEEEEEE
T ss_pred EEeeEEEEEec--cCCcEEEEEEcCHHHhCCCcEEEEEEEEEECCCCEEEEEEEEE
Confidence 47889999999 455566666552 1 24455555 378899999988776
No 148
>KOG3016 consensus Acyl-CoA thioesterase [Lipid transport and metabolism]
Probab=24.00 E-value=5.6e+02 Score=23.41 Aligned_cols=77 Identities=10% Similarity=0.080 Sum_probs=50.8
Q ss_pred CceechHHHHHHHHHHHHHHhhcCCCceEEEEEEEECcCCCCCCEEEEEEEEEC--cEEEEE-EEEecCCcEEEEEEEEE
Q 021623 227 RPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVYPGETLVTEMWLQG--LRVIYQ-VKVKERNRSALSGFVDV 303 (310)
Q Consensus 227 ~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~Pv~~gd~l~~~~~~~~--~~v~~~-~~~~~~g~~vl~g~a~v 303 (310)
..-+.|-+.++.++.+..... .+.-...++.+-|.+-.-+...+...++.-+ .....+ +..-|+|+++.+..+.+
T Consensus 37 ~~~~fGG~i~sQaLaAA~~TV--~e~f~p~SlH~YFI~~gd~~~pI~Y~V~rirdGr~F~~R~V~AvQ~~k~If~~qiSF 114 (294)
T KOG3016|consen 37 SNHAYGGQIASQALAAASKTV--EEMFIPHSLHCYFILVGDPNIPIIYDVKRIRDGRNFATRSVDAVQKGKTIFTLQISF 114 (294)
T ss_pred CcccccceehHHHHHHHHhcc--ccccccceeeeeeeecCCCCCceEEEeeeecCCceeEEEEEEEEECCeEEEEEEEEE
Confidence 334445555555544444332 3444567899999999999999999888743 222222 33468999999999988
Q ss_pred Ee
Q 021623 304 HR 305 (310)
Q Consensus 304 ~~ 305 (310)
.+
T Consensus 115 ~~ 116 (294)
T KOG3016|consen 115 QQ 116 (294)
T ss_pred cc
Confidence 73
No 149
>COG3777 Uncharacterized conserved protein [Function unknown]
Probab=23.70 E-value=38 Score=29.97 Aligned_cols=83 Identities=11% Similarity=0.080 Sum_probs=50.2
Q ss_pred EechhHHHHHHhhcCCCCCCC--CCcccccceeeccCcCCccccceeeeccccCCCCCCCCCCCCCCCCCceeeeeeEEE
Q 021623 24 TYTERDAAIYALGVGACGRDA--VDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPRLLLHGQQYM 101 (310)
Q Consensus 24 ~vt~~~i~~yA~avG~~~~~P--l~~d~~~~~~~~~g~~~~~apPtf~~~l~~~~~~~~~~~~~~~~~~~~~~vH~~~~~ 101 (310)
.+|..++..|+-+-= ..|+ +|+|- .|+....||+|++.+--+.+.+..+. ..+ ..|. + =-.-+|
T Consensus 165 ~~tptpvllfrYsal--tfN~HrIHyD~-~Yat~vEgYpgLVvhGPl~atlll~~--~~~-~~pq---~-----~~Rf~f 230 (273)
T COG3777 165 NFTPTPVLLFRYSAL--TFNGHRIHYDA-PYATYVEGYPGLVVHGPLIATLLLRA--FQP-FLPQ---P-----IRRFRF 230 (273)
T ss_pred cCCCCchheeehhhh--ccCceeeeccC-cceeeccCCCCceecchHHHHHHHHH--hhh-hccc---c-----chheec
Confidence 566777777764433 2555 67754 55545559999998877766554332 110 0111 1 113567
Q ss_pred EEeccCCCCcEEEEEEEEE
Q 021623 102 ELYKPFPSSASIRNEACIA 120 (310)
Q Consensus 102 ~~~~Pl~~gd~l~~~~~v~ 120 (310)
+-++|+.+++.+++-.+..
T Consensus 231 R~L~p~f~~~~lti~~~l~ 249 (273)
T COG3777 231 RNLSPAFPNETLTICGSLS 249 (273)
T ss_pred cccccccCCCCeeEeeEec
Confidence 7778999999998766543
No 150
>PF14765 PS-DH: Polyketide synthase dehydratase; PDB: 3KG7_D 3KG9_A 3KG8_B 3HRR_A 3HRQ_A 3EL6_A 3KG6_B 2VZ8_A 2VZ9_A.
Probab=20.95 E-value=5.7e+02 Score=22.39 Aligned_cols=79 Identities=19% Similarity=0.185 Sum_probs=47.0
Q ss_pred CCCceechHHHHHHHHHHHHHHhhcCCCceEEEEEEEECcCCC--CCCEEEEEEEE--E-Cc----EEEEEEEE-ecCC-
Q 021623 225 FSRPILHGLCTMGFAVRAIIKFICRGDPNMVKNIFSRFLLHVY--PGETLVTEMWL--Q-GL----RVIYQVKV-KERN- 293 (310)
Q Consensus 225 f~~~i~hG~~~~~~~~~~~~~~~~~g~~~~~~~~~~rf~~Pv~--~gd~l~~~~~~--~-~~----~v~~~~~~-~~~g- 293 (310)
.+.+|++|..-+.++..+..... ++. .+.--+++|.+|+. .++...+.+.. . ++ .+.|++.. +.++
T Consensus 36 ~g~~i~Pga~~le~~~~Aa~~~~-~~~--~~~l~~~~~~~pl~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~s~~~~~~ 112 (295)
T PF14765_consen 36 QGQPILPGAAYLEMALEAARQLS-PSS--VVELRDLRFHRPLVLDEGEPRELRVELDPEEDGSGSMEWRFEIFSRNKDDS 112 (295)
T ss_dssp TTEEEE-HHHHHHHHHHHHHHHT-CSS--EEEEEEEEE-S-EEE-TTTEEEEEEEEEEETTTTEEEEEEEEEEEEESTCC
T ss_pred CCEeeehhHHHHHHHHHHHHHhh-Ccc--cceEEEeEecccEEecCCCcEEEEEEEEEccCCCCccceEEEEEEecCCCc
Confidence 46789999988888887665442 222 33333899999996 35666665554 3 22 24666652 3333
Q ss_pred --cEEEEEEEEEEec
Q 021623 294 --RSALSGFVDVHRL 306 (310)
Q Consensus 294 --~~vl~g~a~v~~p 306 (310)
..+.+|.+.+..+
T Consensus 113 ~~~~h~~g~v~~~~~ 127 (295)
T PF14765_consen 113 GWTLHASGQVSLDKD 127 (295)
T ss_dssp GEEEEEEEEEEEESS
T ss_pred ceEEeeeeEEEeeec
Confidence 5777888877653
No 151
>cd03445 Thioesterase_II_repeat2 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=20.42 E-value=3.5e+02 Score=19.73 Aligned_cols=50 Identities=10% Similarity=0.155 Sum_probs=32.7
Q ss_pred eEEEEEeccCCCCcEEEEEEEEEEEEEcCCeEEEEEEEEEEECCCCcEEEEEEEEE
Q 021623 98 QQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTA 153 (310)
Q Consensus 98 ~~~~~~~~Pl~~gd~l~~~~~v~~v~~k~~G~~v~~~~~~~~~~~Ge~v~~~~~t~ 153 (310)
.-+..|.+|..++.+++.++++.. .|+ .+...+.+. .|+|+++++...++
T Consensus 43 s~~~~Fl~p~~~~~pv~~~v~~lr---~GR-s~~~~~V~~--~Q~g~~~~~a~~sf 92 (94)
T cd03445 43 SLHSYFLRPGDPDQPIEYEVERLR---DGR-SFATRRVRA--VQNGKVIFTATASF 92 (94)
T ss_pred EEEEEecCCCCCCCCEEEEEEEEE---CCC-cEEEEEEEE--EECCEEEEEEEEEE
Confidence 566789999999998888766532 222 223344443 37788888776654
Done!