BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>021626
MRCKRHSSDHSSSVGVCASCLRERLSALVAAQAQAQSQLNQHHTGVTAEDRRKQPQDPPP
PLLFPRSVSPYVSRRKSDDTTASTWAYPSRFYSTPQVRPTSTAGNLAVHKRNRKFSLLSN
LFSSRSDKCDSDPRVAYRDSREPEPSSSSSSSPSSWFFSTVFPSRRKKKSSAFCYADDST
ANGRRACRTSNRGMSPARETESDDDCDRSPWGSGDSTEEWRRTPTAAVPAVRRTRTTAHV
KNVSGLAFCLSPLVRASPNRHWNQKGGLQSELVYSGEVRNTTKPHLSTAASFCANRSRKL
ADFGRVNHNR

High Scoring Gene Products

Symbol, full name Information P value
AT2G44600 protein from Arabidopsis thaliana 5.5e-38
AT3G60200 protein from Arabidopsis thaliana 4.4e-36

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  021626
        (310 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2042391 - symbol:AT2G44600 "AT2G44600" species...   407  5.5e-38   1
TAIR|locus:2101487 - symbol:AT3G60200 "AT3G60200" species...   389  4.4e-36   1


>TAIR|locus:2042391 [details] [associations]
            symbol:AT2G44600 "AT2G44600" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005886 "plasma membrane" evidence=IDA]
            GO:GO:0005886 EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC003672
            EMBL:AY074632 IPI:IPI00526466 PIR:T01587 RefSeq:NP_181988.1
            UniGene:At.37030 EnsemblPlants:AT2G44600.1 GeneID:819068
            KEGG:ath:AT2G44600 TAIR:At2g44600 eggNOG:NOG256729
            HOGENOM:HOG000239372 InParanoid:O80500 OMA:RCKKHPY PhylomeDB:O80500
            ProtClustDB:CLSN2714528 ArrayExpress:O80500 Genevestigator:O80500
            Uniprot:O80500
        Length = 313

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 119/331 (35%), Positives = 153/331 (46%)

Query:     1 MRCKRHSSDHSSSVGVCASCLRERXXXXXXXXXXXXXXXXXH-HTGVTAEDRRKXXXXXX 59
             MRCKRH+ D SSS+GVCASCLRER                 H H+ ++            
Sbjct:     1 MRCKRHTVDFSSSIGVCASCLRERLFTLAVSTAASENDDNDHRHSRISPPP--------- 51

Query:    60 XXXXXXRSVSPYVSRRKSDDTTA-------STWAYPSRFYSTPQVRPTSTAGNLAVHK-R 111
                   RSVSPYV+ RKSD  T        S  +  +RF++TPQV   S++        R
Sbjct:    52 --LLFPRSVSPYVAPRKSDAGTGTGAGGRDSVASSNNRFFATPQVVVQSSSSEKVFESDR 109

Query:   112 XXXXXXXXXXXXXXXDKCDSDPRVAYRDSREPEXXXXXXXXXXXXXX--XXXXXXRRKKK 169
                             +  SD   + RDS +                        R KK+
Sbjct:   110 SFKKKKSGLSRFSSFFRTRSDDYDSRRDSCDASTVFSQPSSATTSRSWFSKVISVRSKKQ 169

Query:   170 SSA-FCYADDSTA--------NGRRACRTSNRGMSPARE-TESDDDCDRSPWGSGDSTEE 219
             S+   CY +D  A        N  R  +   RGMSPA + T +D+  + SP   G     
Sbjct:   170 STTNTCYIEDLIASESDHHHHNQNRPRQRYCRGMSPAGDSTTNDESVEESP---G----R 222

Query:   220 WRRTPTAAVPAVRRTRTTAHVKNVSGLAFCLSPLVRASPNRHWNQKGGLQSELVYSGEVR 279
              RRTP    P  ++T T    ++VSG+AFCLSPLVRA PN   N K     +  YSGE++
Sbjct:   223 LRRTPVMGTPGRKKTATIGIGRSVSGMAFCLSPLVRAKPNCSSNWKAKFPPDFGYSGELK 282

Query:   280 NTTKPHLSTAASFCANRSRKLADFGRVNHNR 310
             +  KPHLSTAASFC NRS+KL D GRV+H R
Sbjct:   283 SPAKPHLSTAASFCGNRSKKLVDLGRVDHRR 313


>TAIR|locus:2101487 [details] [associations]
            symbol:AT3G60200 "AT3G60200" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL138658
            HOGENOM:HOG000239372 ProtClustDB:CLSN2714528 EMBL:AY070055
            EMBL:AY117309 IPI:IPI00537152 PIR:T47844 RefSeq:NP_191579.1
            UniGene:At.28614 IntAct:Q9M1C3 EnsemblPlants:AT3G60200.1
            GeneID:825190 KEGG:ath:AT3G60200 TAIR:At3g60200 eggNOG:NOG246156
            InParanoid:Q9M1C3 OMA:CANRSKK PhylomeDB:Q9M1C3 ArrayExpress:Q9M1C3
            Genevestigator:Q9M1C3 Uniprot:Q9M1C3
        Length = 305

 Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
 Identities = 117/322 (36%), Positives = 145/322 (45%)

Query:     1 MRCKRHSSDHSSSVGVCASCLRERXXXXXXXXXXXXXXXXXHHTGVTAEDRRKXXXXXXX 60
             MRCKRH+ D SSS GVCASCLRER                        + ++        
Sbjct:     1 MRCKRHTVDLSSSNGVCASCLRERLLSLAASAAVSAAVEDN-------QSKKSNNNNHPP 53

Query:    61 XXXXXRSVSPYVSRRKSDDTTASTWAYPS---RFYSTPQVRPTSTA-----GNLA-VHKR 111
                  RSVSPYV+RRKSD          S   RF +TPQ+     +      N +   K+
Sbjct:    54 LLIFPRSVSPYVTRRKSDAGAGGGDPLVSSNRRFITTPQIDLVGYSCKDFESNRSNKSKQ 113

Query:   112 XXXXXXXXXXXXXXXDKCDSDPRVAYR--DSREPEXXXXXXXXXXXXXXXXXXXXRRKKK 169
                            +  D++P+       S +                      RRKK+
Sbjct:   114 GKKVSRFSNLFRARSEDFDTNPKSNNPRFSSCDASEISSSSSSSRSWISTILSTGRRKKQ 173

Query:   170 SSAFCYADDSTANGRRACRTSNRGMSPARETESDDDCDRSPWGSGDSTEEWRRTPTAAVP 229
              +  CY +D  A  RR  R   RGMSP R+TE        P  S +S EE RRTP    P
Sbjct:   174 PTTACYIEDVIA-ARRPQRIYCRGMSPVRDTE--------PEQSAESIEELRRTPATKTP 224

Query:   230 AVRRTRTTAHVKNVSGLAFCLSPLVRASPNRHWNQKGGLQSELVYSGEVRNTT-KPHLST 288
               RR       K++SG+AFCLSPLVRASPN  + +K    SE   SGEV     KPH+S 
Sbjct:   225 G-RRKIAMGIGKSMSGMAFCLSPLVRASPNCPFKRKMRFPSEFGNSGEVTAVPEKPHISA 283

Query:   289 AASFCANRSRKLADFGRVNHNR 310
             AASFCANRS+KL D GRV+  R
Sbjct:   284 AASFCANRSKKLVDLGRVDRRR 305


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.125   0.386    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      310       246    0.0010  113 3  11 23  0.46    33
                                                     32  0.46    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  207 KB (2115 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.60u 0.12s 19.72t   Elapsed:  00:00:00
  Total cpu time:  19.60u 0.12s 19.72t   Elapsed:  00:00:00
  Start:  Fri May 10 04:02:57 2013   End:  Fri May 10 04:02:57 2013

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