BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021628
(310 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
pdb|2VN8|B Chain B, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
Length = 375
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 168/368 (45%), Gaps = 77/368 (20%)
Query: 3 AWVYKEYGNSQSVLKFETNVEVPSLRE-DQVLIKVVAAALNPIDFKRMLG----AFSATD 57
AWV +YG ++ VL+F N+ +P + ++V++KV AA++NPID G A +
Sbjct: 24 AWVIDKYGKNE-VLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKR 82
Query: 58 SPL---------PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAE 108
PL P G DV+GVV + G VK FK GDEV+ + P + G+L+E
Sbjct: 83 DPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVP------PWKQGTLSE 136
Query: 109 YTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER-----SAFSAGKSILVLGGAGGV 163
+ V N ++ KPK+L+ +AASLP TA+ + + GK +L+LG +GGV
Sbjct: 137 FVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGV 196
Query: 164 GTMVIQLAK----HVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEK---FD 216
GT IQ+ K HV +L+R LGAD IDY ++E+ + FD
Sbjct: 197 GTFAIQVMKAWDAHVTAVCSQDAS------ELVRKLGADDVIDYKSGSVEEQLKSLKPFD 250
Query: 217 VVFDAVGQ----------------------------------CDKALK-AVKEGGRVVSI 241
+ D VG D L+ V G + +
Sbjct: 251 FILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKH 310
Query: 242 IGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRAT 301
+F + S G L+ + ++GK++ +I+ FPFS+ EAF +E A
Sbjct: 311 FWKGVHYRWAFFMAS-GPCLDDIAELVDAGKIRPVIEQT--FPFSKVPEAFLKVERGHAR 367
Query: 302 GKVVIHPI 309
GK VI+ +
Sbjct: 368 GKTVINVV 375
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 123/237 (51%), Gaps = 25/237 (10%)
Query: 21 NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
N+++P + ++L+K+ + ++NP+D K+ L S P + G+D GVVE VG++V
Sbjct: 24 NLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVSKA----PRVLGFDAIGVVESVGNEVT 79
Query: 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY 140
F GD VY P +NGS AEY + E L+A PKN+S +A SLPL TAY
Sbjct: 80 MFNQGDIVYYS------GSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAY 133
Query: 141 E------GLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLR 193
E G+ R+ + GK++L++ GAGGVG++ Q+AK +G ++ +
Sbjct: 134 ETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAK-AYGLRVITTASRNETIEWTK 192
Query: 194 SLGADLAIDYTKENIEDLP----EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIG 243
+GAD+ +++ + + E D VF D ++ VK G + +I+
Sbjct: 193 KMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVA 249
>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella
Burnetii
Length = 321
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 156/321 (48%), Gaps = 28/321 (8%)
Query: 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGA-FSATD--S 58
KA + ++G + VLK + P R++Q LIKV AA+LNPID+K G+ F A +
Sbjct: 8 KAIQFDQFGPPK-VLKL-VDTPTPEYRKNQXLIKVHAASLNPIDYKTRNGSGFVAKKLKN 65
Query: 59 PLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLA 118
LP+ GYD +G V ++GS V +GD+V G DHP AEY + +
Sbjct: 66 NLPSGLGYDFSGEVIELGSDVNNVNIGDKVXGIAGFP--DHP---CCYAEYVCASPDTII 120
Query: 119 LKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXX 178
K + LSF++AASLP A TA + L ++ G +L+ GAGGVG + IQLAK
Sbjct: 121 QKLEKLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQ--KGT 178
Query: 179 XXXXXXXXXXLDLLRSLGADLAIDYTKEN-IEDLPEKFDVVFDAVGQ--CDKALKAVKEG 235
L++LGA+ I+Y +E+ + + D V D VG +++ +KE
Sbjct: 179 TVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGGDVGIQSIDCLKET 238
Query: 236 GRVVSI----IGSVTPPA-----SSFVLTSDGSI--LEKLNPYFESGKVKAIIDPKGPFP 284
G +VS+ G V A +F L +I L L K++ I+ F
Sbjct: 239 GCIVSVPTITAGRVIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLR--IEISRIFQ 296
Query: 285 FSQTLEAFSHLESSRATGKVV 305
S+ + A LE+ GK+V
Sbjct: 297 LSEAVTAHELLETGHVRGKLV 317
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 154/334 (46%), Gaps = 42/334 (12%)
Query: 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
M+A E+G + VLK +++ VP ++ QVLIKV A +NP++ G +S L
Sbjct: 30 MRAVRVFEFGGPE-VLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS-RKPLL 87
Query: 61 PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
P PG DVAGV+E VG FK GD V+ +G AEY ++ +
Sbjct: 88 PYTPGSDVAGVIEAVGDNASAFKKGDRVF--------TSSTISGGYAEYALAADHTVYKL 139
Query: 121 PKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGXXX 179
P+ L F + A++ + TAY L SA AG+S+LV G +GGVG Q+A+ +G
Sbjct: 140 PEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIAR-AYGLKI 198
Query: 180 XXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKF------DVVFDAVGQCD--KALKA 231
++ GA ++ + N D +K+ D++ + + + K L
Sbjct: 199 LGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSL 258
Query: 232 VKEGGRVVSIIGS-----------VTPPASSFVLTSDGSILEKLNPY-------FESGKV 273
+ GGRV+ ++GS + +S +T S E+ Y E G +
Sbjct: 259 LSHGGRVI-VVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWL 317
Query: 274 KAIIDPKGPFPFSQTLEAFSH-LESSRATGKVVI 306
K +I + +P + EA + + S ATGK+++
Sbjct: 318 KPVIGSQ--YPLEKVAEAHENIIHGSGATGKMIL 349
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 162/355 (45%), Gaps = 62/355 (17%)
Query: 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
M+A V + G + VL+ ++ VP +V +++ AAALN +D G S PL
Sbjct: 1 MRAVVMRARGGPE-VLEV-ADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVAS-PKLPL 57
Query: 61 PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDIN--------EKAL--------------D 98
P + G D +GVV+ VG V+ F GDEV IN E+ L +
Sbjct: 58 PHVLGADGSGVVDAVGPGVEGFAPGDEVV--INPGLSCGRCERCLAGEDNLCPRYQILGE 115
Query: 99 HPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG-LERSAFSAGKSILVL 157
H R+G+ AEY + E LA KPKNLSF EAA++PL TA++ +++ G +LV+
Sbjct: 116 H--RHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVM 173
Query: 158 GGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKF-- 215
GV IQ+AK +FG L ++LGAD ++YT D P++
Sbjct: 174 AAGSGVSVAAIQIAK-LFGARVIATAGSEDKLRRAKALGADETVNYTH---PDWPKEVRR 229
Query: 216 -------DVVFDAVGQC--DKALKAVKEGGRVVSIIGSVT------PPASSF-----VLT 255
D V D G + +KA GGR ++I G+ + P A F +L
Sbjct: 230 LTGGKGADKVVDHTGALYFEGVIKATANGGR-IAIAGASSGYEGTLPFAHVFYRQLSILG 288
Query: 256 SDGSILEKLNP---YFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH 307
S + +L P + E GK+K ++ P E LE R GKVV+
Sbjct: 289 STMASKSRLFPILRFVEEGKLKPVVGQV--LPLEAAAEGHRLLEERRVFGKVVLQ 341
>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
pdb|4DVJ|B Chain B, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
Length = 363
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 99/183 (54%), Gaps = 20/183 (10%)
Query: 32 VLIKVVAAALNPIDFK-RMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVY- 89
+L++V A ++NP+D+K R TD + GYD AG+V VG V F+ GDEV+
Sbjct: 55 ILVEVKAVSVNPVDYKVRRSTPPDGTDW---KVIGYDAAGIVSAVGPDVTLFRPGDEVFY 111
Query: 90 -GDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG------ 142
G I R G+ AE+ V+E ++ KPK L + EAA+LPL + TA+E
Sbjct: 112 AGSI--------IRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLD 163
Query: 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAID 202
+ + A +IL++GGAGGVG++ +Q+A+ + ++SLGA ID
Sbjct: 164 VNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVID 223
Query: 203 YTK 205
++K
Sbjct: 224 HSK 226
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 119/226 (52%), Gaps = 25/226 (11%)
Query: 31 QVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYG 90
QVL+++ A+ NP+D K G PLP I G D+AG V VG +V F+VGD V+G
Sbjct: 34 QVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGXDLAGTVVAVGPEVDSFRVGDAVFG 93
Query: 91 DINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFS 149
G+ A++ AV+ LLA KP L+ +A+ LPL TA+EGL +R+
Sbjct: 94 LTGGVG----GLQGTHAQFAAVDARLLASKPAALTXRQASVLPLVFITAWEGLVDRAQVQ 149
Query: 150 AGKSILVLGGAGGVGTMVIQLA----KHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTK 205
G+++L+ GG GGVG + IQ+A VF L+ +R LGA ID ++
Sbjct: 150 DGQTVLIQGGGGGVGHVAIQIALARGARVF------ATARGSDLEYVRDLGAT-PIDASR 202
Query: 206 ENIEDLP------EKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIG 243
E ED + FD+V+D +G D + AVK G VVS +G
Sbjct: 203 EP-EDYAAEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHVVSCLG 247
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 140/327 (42%), Gaps = 57/327 (17%)
Query: 24 VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK 83
VP E ++++ +A +LN D K +L D P +P D +GVVE VG V +F+
Sbjct: 48 VPEAGEHDIIVRTLAVSLNYRD-KLVLETGXGLDLAFPFVPASDXSGVVEAVGKSVTRFR 106
Query: 84 VGDEVYGDINEKALD------------------HPKRNGSLAEYTAVEENLLALKPKNLS 125
GD V LD HP G L+EY + E PK+L
Sbjct: 107 PGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHP---GVLSEYVVLPEGWFVAAPKSLD 163
Query: 126 FVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXX 184
EA++LP A TA+ L E+ AG ++V G GGV +Q+AK G
Sbjct: 164 AAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQ-GTGGVALFGLQIAKAT-GAEVIVTSS 221
Query: 185 XXXXLDLLRSLGADLAIDYTKENIEDLPEKF---------DVVFDAVGQC--DKALKAVK 233
LD +LGAD I+ + ED E+ D + + G ++LKAV
Sbjct: 222 SREKLDRAFALGADHGINRLE---EDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVA 278
Query: 234 EGGRVVSIIG-----SVTPPASSFVLTS---------DGSILEKLNPYFESGKVKAIIDP 279
GR +S+IG V+ P +L S LE L + +K +ID
Sbjct: 279 PDGR-ISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVGAVDRLGLKPVIDX 337
Query: 280 KGPFPFSQTLEAFSHLESSRATGKVVI 306
+ + F++ EA +HL+ GKVVI
Sbjct: 338 R--YKFTEVPEALAHLDRG-PFGKVVI 361
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 153/362 (42%), Gaps = 82/362 (22%)
Query: 22 VEVPSLREDQVLIKVVAAALN----------PI-------DFKRMLGAFSATDSPLPTIP 64
V +P L D+VL+ V+A+++N PI R G + D P +
Sbjct: 55 VPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRHDQPYHVL- 113
Query: 65 GYDVAGVVEKVGSQVKKFKVGDEV--------------YGD----INEKALDHPKRNGSL 106
G D +GVV + G V+++K GD V +GD ++A G L
Sbjct: 114 GSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGL 173
Query: 107 AEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL--ERSA-FSAGKSILVLGGAGGV 163
AEY V + L KP +L++ EAA PL TAY L +R A G +L+ G +GG+
Sbjct: 174 AEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGL 233
Query: 164 GTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTK----ENIEDLPEKF---- 215
G+ IQ K+ G +R+LG DL I+ + ++I D P +
Sbjct: 234 GSYAIQFVKNGGGIPVAVVSSAQKEA-AVRALGCDLVINRAELGITDDIADDPRRVVETG 292
Query: 216 ---------------DVVFDAVGQCDKALKAV--KEGGRVVSIIGSVTPPASSF------ 252
D+VF+ G+ L + + GG VV+ GS + +F
Sbjct: 293 RKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVT-CGSSSGYLHTFDNRYLW 351
Query: 253 -----VLTSDGSILEK---LNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKV 304
++ S G+ E+ N FESG V + +P ++ EA +++SR GKV
Sbjct: 352 MKLKKIVGSHGANHEEQQATNRLFESGAVVPAM--SAVYPLAEAAEACRVVQTSRQVGKV 409
Query: 305 VI 306
+
Sbjct: 410 AV 411
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 149/339 (43%), Gaps = 50/339 (14%)
Query: 16 LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD------SPLPTIPGYDVA 69
LK E ++ +P + QVLIK+ AA + D G F LP G+++A
Sbjct: 13 LKLE-DIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIA 71
Query: 70 GVVEKVGSQVKKFKVGDEV------------YGDINEKAL-DHPK-----RNGSLAEYTA 111
G +E+VG +V + GD V Y I E+ L D P+ +G+ AEY
Sbjct: 72 GRIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGINYDGAYAEYVL 131
Query: 112 VEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLA 171
V K + LS VEAA L + T Y + +++ K+++V+G GG+GTM IQ+A
Sbjct: 132 VPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQIA 191
Query: 172 KHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKEN----IEDLPE--KFDVVFDAVGQC 225
K V G L+ + GAD I+ + ++ I + + D V D +
Sbjct: 192 KAVSGATIIGVDVREEALEAAKRAGADYVINASSQDPVSEIRRITQGKGADAVID-LNNS 250
Query: 226 DKALKA-----VKEGGRV-VSIIGS--------VTPPASSFV--LTSDGSILEKLNPYFE 269
+K L K+G V V + G+ +T F+ L + S + E
Sbjct: 251 EKTLSIYPYVLAKQGKYVMVGLFGADLKYHAPLITLNEVQFIGSLVGNQSDFLGIMSLAE 310
Query: 270 SGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
+GKVK ++ + EA +LE+ +A G+ V+ P
Sbjct: 311 AGKVKPMVTKT--MKLEEANEAIDNLENFKAVGRQVLVP 347
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 151/347 (43%), Gaps = 54/347 (15%)
Query: 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
MKA V +++ + LK + VE P++ +VL+++ A + D G + L
Sbjct: 1 MKAAVVEQF---KEPLKIK-EVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPK-L 55
Query: 61 PTIPGYDVAGVVEKVGSQVKKFKVGDEV----------YGDI----NEKALDHPKR---- 102
P IPG++ G+VE+VG V KVGD V + D E +H K
Sbjct: 56 PLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYS 115
Query: 103 -NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
+G AEY + + P NLSF EAA + A T Y+ L+ + G+ + + G G
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIY-GIG 174
Query: 162 GVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIED-LPEKFDVVFD 220
G+G + +Q AK G L+L + LGADL ++ KE+ + EK V
Sbjct: 175 GLGHVAVQYAK-AMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHA 233
Query: 221 AVGQC------DKALKAVKEGGRVVSIIGSVTPPASSFVLTSD---------GSI----- 260
AV A +++ GG V ++G PP + D GSI
Sbjct: 234 AVVTAVSKPAFQSAYNSIRRGGACV-LVG--LPPEEMPIPIFDTVLNGIKIIGSIVGTRK 290
Query: 261 -LEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
L++ + GKVK II+ + P + E F + + G+VV+
Sbjct: 291 DLQEALQFAAEGKVKTIIEVQ---PLEKINEVFDRMLKGQINGRVVL 334
>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed
With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa
pdb|3B70|A Chain A, Crystal Structure Of Aspergillus Terreus Trans-Acting
Lovastatin Polyketide Enoyl Reductase (Lovc) With Bound
Nadp
Length = 371
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 24 VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK 83
P L DQV ++V A A+NP D K M G F+ + L G D AG V VGS V +
Sbjct: 31 CPMLPRDQVYVRVEAVAINPSDTK-MRGQFATPWAFL----GTDYAGTVVAVGSDVTHIQ 85
Query: 84 VGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETA---- 139
VGD VYG NE P + G+ ++YT + A PK LSF +AA+LP TA
Sbjct: 86 VGDRVYGAQNEMCPRTPDQ-GAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAM 144
Query: 140 -YEGLERSAFSAGKS--------ILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLD 190
GL + SA + +LV GG+ T+ +Q+ + D
Sbjct: 145 KLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLR--LSGYIPIATCSPHNFD 202
Query: 191 LLRSLGADLAIDYTKENI 208
L +S GA+ DY N+
Sbjct: 203 LAKSRGAEEVFDYRAPNL 220
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 150/347 (43%), Gaps = 54/347 (15%)
Query: 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
MKA V +++ + LK + VE P++ +VL+++ A + D G + L
Sbjct: 1 MKAAVVEQF---KEPLKIK-EVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPK-L 55
Query: 61 PTIPGYDVAGVVEKVGSQVKKFKVGDEV----------YGDI----NEKALDHPKR---- 102
P IPG++ G+VE+VG V KVGD V + D E +H K
Sbjct: 56 PLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYS 115
Query: 103 -NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
+G AEY + + P NLSF EAA + A T Y+ L+ + G+ + + G G
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIY-GIG 174
Query: 162 GVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIED-LPEKFDVVFD 220
G G + +Q AK G L+L + LGADL ++ KE+ + EK V
Sbjct: 175 GFGHVAVQYAK-AMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHA 233
Query: 221 AVGQC------DKALKAVKEGGRVVSIIGSVTPPASSFVLTSD---------GSI----- 260
AV A +++ GG V ++G PP + D GSI
Sbjct: 234 AVVTAVSKPAFQSAYNSIRRGGACV-LVG--LPPEEMPIPIFDTVLNGIKIIGSIVGTRK 290
Query: 261 -LEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
L++ + GKVK II+ + P + E F + + G+VV+
Sbjct: 291 DLQEALQFAAEGKVKTIIEVQ---PLEKINEVFDRMLKGQINGRVVL 334
>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s
With Bound Nadp
Length = 371
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 90/198 (45%), Gaps = 21/198 (10%)
Query: 24 VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK 83
P L DQV ++V A A+NP D M G F+ + L G D AG V VGS V +
Sbjct: 31 CPMLPRDQVYVRVEAVAINPSD-TSMRGQFATPWAFL----GTDYAGTVVAVGSDVTHIQ 85
Query: 84 VGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETA---- 139
VGD VYG NE P + G+ ++YT + A PK LSF +AA+LP TA
Sbjct: 86 VGDRVYGAQNEMCPRTPDQ-GAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAM 144
Query: 140 -YEGLERSAFSAGKS--------ILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLD 190
GL + SA + +LV GG+ T+ +Q+ + D
Sbjct: 145 KLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLR--LSGYIPIATCSPHNFD 202
Query: 191 LLRSLGADLAIDYTKENI 208
L +S GA+ DY N+
Sbjct: 203 LAKSRGAEEVFDYRAPNL 220
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 147/344 (42%), Gaps = 48/344 (13%)
Query: 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
MKA V YG + L+ E V+VP QVL+K+ A+ + D G + PL
Sbjct: 7 MKAAVVHAYG---APLRIE-EVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWP-VKPPL 61
Query: 61 PTIPGYDVAGVVEKVGSQVKKFKVGDEV-------------YGDINEKALDHPKRN---- 103
P IPG++ G V VGS V + K GD V + + L ++N
Sbjct: 62 PFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYS 121
Query: 104 --GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
G AEY + N + + PKN+ F E A + A T Y+GL+++ G+ + + G G
Sbjct: 122 VNGGYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKGLKQTNARPGQWV-AISGIG 180
Query: 162 GVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKEN-----IEDLPEKFD 216
G+G + +Q A+ G L+L R LGA L ++ +E+ D+
Sbjct: 181 GLGHVAVQYAR-AMGLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQRDIGGAHG 239
Query: 217 VVFDAVGQC--DKALKAVKEGGRVVSI---IGSVTPPASSFVLTS---DGSI------LE 262
V+ AV +A+ + GG + + G P VL GSI L+
Sbjct: 240 VLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQ 299
Query: 263 KLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
+ + G VKA I P +Q L+ + + + G++V+
Sbjct: 300 EALDFAGEGLVKATIHPGKLDDINQILD---QMRAGQIEGRIVL 340
>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily
Protein (np_718042.1) From Shewanella Oneidensis At 1.55
A Resolution
Length = 315
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 140/324 (43%), Gaps = 49/324 (15%)
Query: 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLP 61
+ W Y+ +S ++ +V++P+L D +L++ A +NP+D+K + + +
Sbjct: 6 QVWAYQTKTHSVTL----NSVDIPALAADDILVQNQAIGINPVDWKFIKA--NPINWSNG 59
Query: 62 TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKP 121
+PG D AGV+ KVG++V +G V + K R+GS AE+T + + + P
Sbjct: 60 HVPGVDGAGVIVKVGAKVDSKXLGRRVAYHTSLK------RHGSFAEFTVLNTDRVXTLP 113
Query: 122 KNLSFVEAASLPLATETAYEGLERSAFSAGKSILVL--GGAGGVGTMVIQLAKHVFGXXX 179
NLSF AA+LP TA++ E+ + + +L++ G + T + A +V
Sbjct: 114 DNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGFGAVNNLLTQXLNNAGYVVDLVS 173
Query: 180 XXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKA--LKAVKEGGR 237
L ++L A + + + +K+ +FDAV + A + ++K G
Sbjct: 174 A---------SLSQALAAKRGVRHLYREPSQVTQKYFAIFDAVNSQNAAALVPSLKANGH 224
Query: 238 VVSIIGSVTPPAS-SFVLT-----------------SDGSIL----EKLNPYFESGKVKA 275
++ I + P +F T D IL E L GK +
Sbjct: 225 IICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILXQQGEALLTLIAQGKXE- 283
Query: 276 IIDPKGPFPFSQTLEAFSHLESSR 299
I F F Q +EA H E ++
Sbjct: 284 -IAAPDIFRFEQXIEALDHSEQTK 306
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 144/324 (44%), Gaps = 54/324 (16%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP--LPTIPGYDVAGVVEKVGSQV 79
V PS E +VL+KV A+ALN D + G + D P I G + +G V ++G
Sbjct: 26 VAKPSPGEGEVLLKVAASALNRADLMQRQGQY---DPPPGASNILGLEASGHVAELGPGC 82
Query: 80 K-KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATET 138
+ +K+GD + G A+Y V E LL P+ L+ +AA++P A T
Sbjct: 83 QGHWKIGDTAMALL---------PGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLT 133
Query: 139 AYEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGA 197
A++ L AG +L+ G GVGT IQL + + G L + LGA
Sbjct: 134 AFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTR-MAGAIPLVTAGSQKKLQMAEKLGA 192
Query: 198 DLAIDYTKENIEDLPEKF------DVVFDAVG--QCDKALKAVKEGGRVV--SIIGS--V 245
+Y KE+ + KF +++ D +G +K + + GR V ++G +
Sbjct: 193 AAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGGDI 252
Query: 246 TPPASSFVLTSDGSIL--------------------EKLNPYFES---GKVKAIIDPKGP 282
P S +L GS++ E++ P+F + ++ ++D
Sbjct: 253 NGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRI-- 310
Query: 283 FPFSQTLEAFSHLESSRATGKVVI 306
+P ++ EA ++E+++ GK+V+
Sbjct: 311 YPVTEIQEAHKYMEANKNIGKIVL 334
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 144/324 (44%), Gaps = 54/324 (16%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP--LPTIPGYDVAGVVEKVGSQV 79
V PS E +VL+KV A+ALN D + G + D P I G + +G V ++G
Sbjct: 42 VAKPSPGEGEVLLKVAASALNRADLMQRQGQY---DPPPGASNILGLEASGHVAELGPGC 98
Query: 80 K-KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATET 138
+ +K+GD + G A+Y V E LL P+ L+ +AA++P A T
Sbjct: 99 QGHWKIGDTAMALL---------PGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLT 149
Query: 139 AYEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGA 197
A++ L AG +L+ G GVGT IQL + + G L + LGA
Sbjct: 150 AFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTR-MAGAIPLVTAGSQKKLQMAEKLGA 208
Query: 198 DLAIDYTKENIEDLPEKF------DVVFDAVG--QCDKALKAVKEGGRVV--SIIGS--V 245
+Y KE+ + KF +++ D +G +K + + GR V ++G +
Sbjct: 209 AAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGGDI 268
Query: 246 TPPASSFVLTSDGSIL--------------------EKLNPYFES---GKVKAIIDPKGP 282
P S +L GS++ E++ P+F + ++ ++D
Sbjct: 269 NGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRI-- 326
Query: 283 FPFSQTLEAFSHLESSRATGKVVI 306
+P ++ EA ++E+++ GK+V+
Sbjct: 327 YPVTEIQEAHKYMEANKNIGKIVL 350
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 93/221 (42%), Gaps = 26/221 (11%)
Query: 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
MKA V + +G ++ V +P Q+ + + A+ + D G + +P
Sbjct: 26 MKAAVVRAFGKPLTI----DEVPIPQPGPGQIQVAIQASGVCHTDLHAAEGDWPVKPNP- 80
Query: 61 PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKR------------------ 102
P IPG++ G V VGS VK K GD V A H +
Sbjct: 81 PFIPGHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCEEQLNTGYS 140
Query: 103 -NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
NG AEY + N + PKN+ F E A + A T Y+GL+ + G + V+ G G
Sbjct: 141 VNGGFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVTVYKGLKVTDTKPGDWV-VISGIG 199
Query: 162 GVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAID 202
G+G M +Q A+ G LDL R LGA + ++
Sbjct: 200 GLGHMAVQYAR-AMGLNVAAVDIDDRKLDLARRLGATVTVN 239
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 131/315 (41%), Gaps = 45/315 (14%)
Query: 24 VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK 83
+P E +VL++ A +N D + G++ P I G +++G + VG V +
Sbjct: 50 LPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASP-ILGLELSGEIVGVGPGVSGYA 108
Query: 84 VGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL 143
VGD+V G N G+ AEY + + PK V+AA+LP T + L
Sbjct: 109 VGDKVCGLAN---------GGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANL 159
Query: 144 -ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAID 202
+ + + G+S+L+ GG G+GT IQLA+ FG + LGA I+
Sbjct: 160 FQXAGLTEGESVLIHGGTSGIGTTAIQLAR-AFGAEVYATAGSTGKCEACERLGAKRGIN 218
Query: 203 YTKENI-----EDLPEKFDVVFDAVGQC--DKALKAVKEGG--RVVSIIGSVTP------ 247
Y E+ + + D++ D +G ++ + ++ + G +++ +G
Sbjct: 219 YRSEDFAAVIKAETGQGVDIILDXIGAAYFERNIASLAKDGCLSIIAFLGGAVAEKVNLS 278
Query: 248 PASSFVLTSDGS----------------ILEKLNPYFESGKVKAIIDPKGPFPFSQTLEA 291
P LT GS +L ++ P E+G V +I F F +A
Sbjct: 279 PIXVKRLTVTGSTXRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKV--FAFEDVADA 336
Query: 292 FSHLESSRATGKVVI 306
LE GKV +
Sbjct: 337 HRLLEEGSHVGKVXL 351
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 123/291 (42%), Gaps = 34/291 (11%)
Query: 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP- 59
M+A V +G + F +P ++ ++ I+V A LN ID G D+P
Sbjct: 4 MRAVVLAGFGGLNKLRLFRK--AMPEPQDGELKIRVKACGLNFIDLMVRQGNI---DNPP 58
Query: 60 -LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLA 118
P +PG++ +G+VE +G VK +++GD V +N A AE +
Sbjct: 59 KTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNA---------WAEVVCTPVEFVY 109
Query: 119 LKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAK----- 172
P ++SF EAA+ P+ TAY L E + G S+LV GGVG V QL
Sbjct: 110 KIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNV 169
Query: 173 HVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG--QCDKALK 230
VFG D + L D DY +E E D+V D + K L
Sbjct: 170 TVFGTASTFKHEAIK--DSVTHL-FDRNADYVQEVKRISAEGVDIVLDCLCGDNTGKGLS 226
Query: 231 AVKEGGRVVSIIGS---VTPPASSFV-LTSDGSILEKLNP--YFESGKVKA 275
+K G + + GS VT SF +EK+NP +E KV A
Sbjct: 227 LLKPLGTYI-LYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIA 276
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 26/221 (11%)
Query: 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
MKA V + +G ++ V VP QV +K+ A+ + D G + + L
Sbjct: 3 MKAAVVRAFGAPLTI----DEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPT-L 57
Query: 61 PTIPGYDVAGVVEKVGSQVKKFKVGDEV------------------YGDINEKALDHPKR 102
P IPG++ G V VGS V + K GD V + + EK +
Sbjct: 58 PFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYS 117
Query: 103 -NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
NG EY + N + L P + FVE A + A T Y+GL+ + G+ + V+ G G
Sbjct: 118 VNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVTDTRPGQWV-VISGIG 176
Query: 162 GVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAID 202
G+G + +Q A+ G L+L R LGA++A++
Sbjct: 177 GLGHVAVQYAR-AMGLRVAAVDIDDAKLNLARRLGAEVAVN 216
>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|M Chain M, Architecture Of Mammalian Fatty Acid Synthase
Length = 295
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 148/330 (44%), Gaps = 59/330 (17%)
Query: 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
MKAWV K G + ++ P E +V+++V A LN D LGA+ P
Sbjct: 1 MKAWVLKRLGGPLEL----VDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHP- 55
Query: 61 PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
P IPG +V GVVE Y + + G LAE AV + L
Sbjct: 56 PFIPGMEVVGVVE------------GRRYAALVPQ--------GGLAERVAVPKGALLPL 95
Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXX 180
P+ LS EAA+ P++ TAY L+R+ G+ +LV AG +GT +Q+A+ G
Sbjct: 96 PEGLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVAR-AMGLRVL 154
Query: 181 XXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEK------FDVVFDAVG-QCDKALKAVK 233
L L +LGA+ A Y ++PE+ D+V + G + +++L +
Sbjct: 155 AAASRPEKLALPLALGAEEAATYA-----EVPERAKAWGGLDLVLEVRGKEVEESLGLLA 209
Query: 234 EGGRVVSIIGSVTPPAS---------SFVLT---SDGSILEK----LNPYFESGKVKAII 277
GGR+V I + PP F LT +G+++E+ L P +++ ++
Sbjct: 210 HGGRLVYI--APIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRL-GRELRPVV 266
Query: 278 DPKGPFPFSQTLEAFSHLESSRATGKVVIH 307
P FPF++ AF L TGKVV+
Sbjct: 267 GPV--FPFAEAEAAFRALLDRGHTGKVVVR 294
>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 113/248 (45%), Gaps = 38/248 (15%)
Query: 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
MKAWV K G + ++ P E +V+++V A LN D LGA+ P
Sbjct: 1 MKAWVLKRLGGPLEL----VDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHP- 55
Query: 61 PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
P IPG +V GVVE Y + + G LAE AV + L
Sbjct: 56 PFIPGMEVVGVVE------------GRRYAALVPQ--------GGLAERVAVPKGALLPL 95
Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXX 180
P+ LS EAA+ P++ TAY L+R+ G+ +LV AG +GT +Q+A+ G
Sbjct: 96 PEGLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVAR-AMGLRVL 154
Query: 181 XXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEK------FDVVFDAVG-QCDKALKAVK 233
L L +LGA+ A Y ++PE+ D+V + G + +++L +
Sbjct: 155 AAASRPEKLALPLALGAEEAATYA-----EVPERAKAWGGLDLVLEVRGKEVEESLGLLA 209
Query: 234 EGGRVVSI 241
GGR+V I
Sbjct: 210 HGGRLVYI 217
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 30/218 (13%)
Query: 12 SQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPT----IPGYD 67
S L+++ ++ VP + +++LI V + + D G D PLP + G++
Sbjct: 14 SHGKLEYK-DIPVPKPKANELLINVKYSGVCHTDLHAWHG-----DWPLPVKLPLVGGHE 67
Query: 68 VAGVVEKVGSQVKKFKVGDEV-------------YGDI-NEKALDHP-----KRNGSLAE 108
AGVV +G VK +K+GD Y ++ NE H +GS +
Sbjct: 68 GAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQ 127
Query: 109 YTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVI 168
Y + A P+ + A + A T Y+ L+ + AG + + G AGG+G++ +
Sbjct: 128 YATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAGGLGSLAV 187
Query: 169 QLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKE 206
Q AK G +L RS+G ++ ID+TKE
Sbjct: 188 QYAK-AMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKE 224
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 150/333 (45%), Gaps = 49/333 (14%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD------SPLPTIPGYDVAGVVEKV 75
+ VP + QVLIKV AA + D G F LP G+++AG +E+V
Sbjct: 18 IGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEV 77
Query: 76 GSQVKKFKVGDEV------------YGDINEKAL-DHPKR-----NGSLAEYTAVEENLL 117
G +V + GD V Y I E+ L D P+ +G+ AEY V
Sbjct: 78 GDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKY 137
Query: 118 ALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGX 177
K + L+ VEAA L + T Y + +++ K++LV+G GG+GTM +Q+AK V G
Sbjct: 138 MYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA 197
Query: 178 XXXXXXXXXXXLDLLRSLGADLAIDYTKEN----IEDLPEK--FDVVFDAVGQCDKAL-- 229
++ + GAD I+ + ++ I + E D V D + +K L
Sbjct: 198 TIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVID-LNNSEKTLSV 256
Query: 230 --KAVKEGGR--VVSIIGSVTPPASSFVLTSD----GSILEKLNPYF------ESGKVKA 275
KA+ + G+ +V + G+ + + S+ GS++ + + E+GKVK
Sbjct: 257 YPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKP 316
Query: 276 IIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
+I + EA +LE+ +A G+ V+ P
Sbjct: 317 MITKT--MKLEEANEAIDNLENFKAIGRQVLIP 347
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 144/348 (41%), Gaps = 79/348 (22%)
Query: 21 NVEVPSLREDQVLIKVVAAALN----------PID---FKRMLGAFS--ATDSPLP-TIP 64
+V VP L + L+ V+A+++N P+ F G S A LP +
Sbjct: 62 DVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYHVI 121
Query: 65 GYDVAGVVEKVGSQVKKFKVGDEVYGDI-----------NEKALDHPKR-------NGSL 106
G D+AGVV + G V ++ GDEV N+ LD +R G L
Sbjct: 122 GSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGL 181
Query: 107 AEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL---ERSAFSAGKSILVLGGAGGV 163
AE V+ N L KP +LS+ EAA+ L TAY L + G ++L+ G +GG+
Sbjct: 182 AEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGL 241
Query: 164 GTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAID--------YTKENIEDLPEKF 215
G+ Q A G ++ R++GA+ ID + EN +D P+++
Sbjct: 242 GSYATQFAL-AGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQD-PKEW 299
Query: 216 DVVFDAVGQCDKALKAVKE--GGRVVSII----GSVTPPASSFVLTSDGSI--------- 260
+ K ++E GG + I+ G T AS FV G+I
Sbjct: 300 ----------KRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCASTSGY 349
Query: 261 LEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
+ + + + +K II F+ EA+ E++R K IHP
Sbjct: 350 MHEYDNRYLWMSLKRIIGSH----FANYREAW---EANRLIAKGRIHP 390
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 150/333 (45%), Gaps = 49/333 (14%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD------SPLPTIPGYDVAGVVEKV 75
+ VP + QVLIKV AA + D G F LP G+++AG +E+V
Sbjct: 18 IGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEV 77
Query: 76 GSQVKKFKVGDEV------------YGDINEKAL-DHPKR-----NGSLAEYTAVEENLL 117
G +V + GD V Y I E+ L D P+ +G+ AEY V
Sbjct: 78 GDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKY 137
Query: 118 ALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGX 177
K + L+ VEAA L + T Y + +++ K++LV+G GG+GTM +Q+AK V G
Sbjct: 138 MYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA 197
Query: 178 XXXXXXXXXXXLDLLRSLGADLAIDYTKEN----IEDLPEK--FDVVFDAVGQCDKAL-- 229
++ + GAD I+ + ++ I + E D V D + +K L
Sbjct: 198 TIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVID-LNYSEKTLSV 256
Query: 230 --KAVKEGGR--VVSIIGSVTPPASSFVLTSD----GSILEKLNPYF------ESGKVKA 275
KA+ + G+ +V + G+ + + S+ GS++ + + E+GKVK
Sbjct: 257 YPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKP 316
Query: 276 IIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
+I + EA +LE+ +A G+ V+ P
Sbjct: 317 MITKT--MKLEEANEAIDNLENFKAIGRQVLIP 347
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 150/333 (45%), Gaps = 49/333 (14%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD------SPLPTIPGYDVAGVVEKV 75
+ VP + QVLIKV AA + D G F LP G+++AG +E+V
Sbjct: 18 IGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEV 77
Query: 76 GSQVKKFKVGDEV------------YGDINEKAL-DHPKR-----NGSLAEYTAVEENLL 117
G +V + GD V Y I E+ L D P+ +G+ AEY V
Sbjct: 78 GDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKY 137
Query: 118 ALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGX 177
K + L+ VEAA L + T Y + +++ K++LV+G GG+GTM +Q+AK V G
Sbjct: 138 MYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA 197
Query: 178 XXXXXXXXXXXLDLLRSLGADLAIDYTKEN----IEDLPEK--FDVVFDAVGQCDKAL-- 229
++ + GAD I+ + ++ I + E D V D + +K L
Sbjct: 198 TIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVID-LNYSEKTLSV 256
Query: 230 --KAVKEGGR--VVSIIGSVTPPASSFVLTSD----GSILEKLNPYF------ESGKVKA 275
KA+ + G+ +V + G+ + + S+ GS++ + + E+GKVK
Sbjct: 257 YPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKP 316
Query: 276 IIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
+I + EA +LE+ +A G+ V+ P
Sbjct: 317 MITKT--MKLEEANEAIDNLENFKAIGRQVLIP 347
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 137/338 (40%), Gaps = 61/338 (18%)
Query: 22 VEVPSLREDQVLIKVVAAALN----------PID---FKRMLGAFS----ATDSPLPTIP 64
V VP L + L+ V+A+++N P+ F G S D P I
Sbjct: 81 VPVPELGPGEALVAVMASSVNYNSVWTSIFEPVSTFAFLERYGKLSPLTKRHDLPYHII- 139
Query: 65 GYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRN------------------GSL 106
G D+AGVV + G V ++ GDEV L+ P + G L
Sbjct: 140 GSDLAGVVLRTGPGVNAWQPGDEVVAHCLSVELESPDGHDDTMLDPEQRIWGFETNFGGL 199
Query: 107 AEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL---ERSAFSAGKSILVLGGAGGV 163
AE V+ N L KPK+L++ EAA+ L TAY L +A G ++L+ G +GG+
Sbjct: 200 AEIALVKTNQLMPKPKHLTWEEAAAPGLVNSTAYRQLVSRNGAAMKQGDNVLIWGASGGL 259
Query: 164 GTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG 223
G+ Q A G ++ RS+GA+ ID E + ++
Sbjct: 260 GSYATQFAL-AGGANPICVVSSPQKAEICRSMGAEAIIDRNAEGYKFWKDEHTQDPKEWK 318
Query: 224 QCDKALKAVKEGGRVVSII----GSVTPPASSFVLTSDGSI---------LEKLNPYFES 270
+ K ++ + GG + I+ G T AS +V G+I + + + +
Sbjct: 319 RFGKRIRELT-GGEDIDIVFEHPGRETFGASVYVTRKGGTITTCASTSGYMHEYDNRYLW 377
Query: 271 GKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
+K II F+ EA+ E++R K IHP
Sbjct: 378 MSLKRIIGSH----FANYREAY---EANRLIAKGKIHP 408
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 134/318 (42%), Gaps = 64/318 (20%)
Query: 32 VLIKVVAAALNPIDFKRMLGAFSATDSPLPTIP---GYDVAGVVEKVGSQVKKFKVGDEV 88
V+++ A LN ID G + P P +P G + AGVVE VG +V +FKVGD V
Sbjct: 31 VVVRNKAIGLNFIDTYYRSGLY-----PAPFLPSGLGAEGAGVVEAVGDEVTRFKVGDRV 85
Query: 89 -YGDINEKALDHPKRNGSLAEYTAV----EENLLALKPKNLSFVEAASLPLATETAYEGL 143
YG G L Y+ V E NL+ L ++SF +AA+L L T + L
Sbjct: 86 AYG------------TGPLGAYSEVHVLPEANLVKLA-DSVSFEQAAALMLKGLTV-QYL 131
Query: 144 ERSAFSA--GKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAI 201
R + G+ IL AGGVG++ Q AK G ++LGA I
Sbjct: 132 LRQTYQVKPGEIILFHAAAGGVGSLACQWAK-ALGAKLIGTVSSPEKAAHAKALGAWETI 190
Query: 202 DYTKENIEDL------PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTPPASSF- 252
DY+ E++ +K VV+D VGQ +L +V G VVS G+ + P S
Sbjct: 191 DYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVS-FGNASGPVSGVN 249
Query: 253 --VLTSDGSIL--------------------EKLNPYFESGKVKAIIDPKGPFPFSQTLE 290
+L S+ ++L SGK+K +D + +
Sbjct: 250 LGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLK--VDGIEQYALKDAAK 307
Query: 291 AFSHLESSRATGKVVIHP 308
A L + R TG ++ P
Sbjct: 308 AQIELSARRTTGSTILIP 325
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 126/303 (41%), Gaps = 40/303 (13%)
Query: 27 LREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGD 86
L + +V I + AA +N D LG + S G + AGVV + G V GD
Sbjct: 236 LGDGEVRIAMRAAGVNFRDALIALGMYPGVASL-----GSEGAGVVVETGPGVTGLAPGD 290
Query: 87 EVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ER 145
V G I PK G LA + ++ P SF AAS+P+ TAY L +
Sbjct: 291 RVMGMI-------PKAFGPLA---VADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDL 340
Query: 146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXX-XXXXXXXXXXLDLLR-SLGADLAIDY 203
+ G+S+LV AGGVG IQLA+H+ ++L R L + D+
Sbjct: 341 AGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQAVELSREHLASSRTCDF 400
Query: 204 TKENIEDLPEK-FDVVFDAVGQ--CDKALKAVKEGGRVVSI----------IGSVTPPAS 250
++ + + DVV +++ D +L+ + GGR + + + P S
Sbjct: 401 EQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLELGKTDVRDPVEVADAHPGVS 460
Query: 251 SFVLTS-------DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGK 303
+ G +L +L FE ++ + P + Q EA HL +R GK
Sbjct: 461 YQAFDTVEAGPQRIGEMLHELVELFEGRVLEPL--PVTAWDVRQAPEALRHLSQARHVGK 518
Query: 304 VVI 306
+V+
Sbjct: 519 LVL 521
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 133/318 (41%), Gaps = 56/318 (17%)
Query: 29 EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIP---GYDVAGVVEKVGSQVKKFKVG 85
E+++ ++ A +N ID G + P P++P G + AG+V KVGS VK K G
Sbjct: 28 ENEIQVENKAIGINFIDTYIRSGLY-----PPPSLPSGLGTEAAGIVSKVGSGVKHIKAG 82
Query: 86 DEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK----PKNLSFVEAASLPLATETAYE 141
D V +L Y++V N++A K P +SF +AA+ L T Y
Sbjct: 83 DRVV-----------YAQSALGAYSSV-HNIIADKAAILPAAISFEQAAASFLKGLTVYY 130
Query: 142 GLERS-AFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLA 200
L ++ + L AGGVG + Q AK + L++ GA
Sbjct: 131 LLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA-GAWQV 189
Query: 201 IDYTKEN-IEDLPE-----KFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGS-------- 244
I+Y +E+ +E L E K VV+D+VG+ +++L ++ G +VS S
Sbjct: 190 INYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAVTGVN 249
Query: 245 -----------VTPPASSFVLTSDGSILEKLNPYFE---SGKVKAIIDPKGPFPFSQTLE 290
VT P+ +T+ + E N F SG +K + + +P
Sbjct: 250 LGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKYPLKDAQR 309
Query: 291 AFSHLESSRATGKVVIHP 308
A LES G ++ P
Sbjct: 310 AHEILESRATQGSSLLIP 327
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 109/248 (43%), Gaps = 39/248 (15%)
Query: 11 NSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAG 70
N + + + VP + +L++ +N D G + + P P G++ G
Sbjct: 43 NFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP-PFDIGFEGIG 101
Query: 71 VVEKVG-SQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLL----ALKPKNLS 125
V +G S ++ VG V A P GS AEYT V ++ ++KP+ L+
Sbjct: 102 EVVALGLSASARYTVGQAV-------AYMAP---GSFAEYTVVPASIATPVPSVKPEYLT 151
Query: 126 FVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAK----HVFGXXXX 180
+ + + TAY L E S GK +LV AGG G +QL+K HV G
Sbjct: 152 LLVSGT------TAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSS 205
Query: 181 XXXXXXXXLDLLRSLGADLAIDYTKENI-----EDLPEKFDVVFDAVGQC--DKALKAVK 233
L+SLG D I+Y E + ++ PE DVV+++VG D A+ A+
Sbjct: 206 DEKSA-----FLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALA 260
Query: 234 EGGRVVSI 241
GR++ I
Sbjct: 261 TKGRLIVI 268
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 109/248 (43%), Gaps = 39/248 (15%)
Query: 11 NSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAG 70
N + + + VP + +L++ +N D G + + P P G++ G
Sbjct: 14 NFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP-PFDIGFEGIG 72
Query: 71 VVEKVG-SQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLL----ALKPKNLS 125
V +G S ++ VG V A P GS AEYT V ++ ++KP+ L+
Sbjct: 73 EVVALGLSASARYTVGQAV-------AYMAP---GSFAEYTVVPASIATPVPSVKPEYLT 122
Query: 126 FVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAK----HVFGXXXX 180
+ + + TAY L E S GK +LV AGG G +QL+K HV G
Sbjct: 123 LLVSGT------TAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSS 176
Query: 181 XXXXXXXXLDLLRSLGADLAIDYTKENI-----EDLPEKFDVVFDAVGQC--DKALKAVK 233
L+SLG D I+Y E + ++ PE DVV+++VG D A+ A+
Sbjct: 177 DEKSA-----FLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALA 231
Query: 234 EGGRVVSI 241
GR++ I
Sbjct: 232 TKGRLIVI 239
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 109/248 (43%), Gaps = 39/248 (15%)
Query: 11 NSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAG 70
N + + + VP + +L++ +N D G + + P P G++ G
Sbjct: 35 NFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP-PFDIGFEGIG 93
Query: 71 VVEKVG-SQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLL----ALKPKNLS 125
V +G S ++ VG V A P GS AEYT V ++ ++KP+ L+
Sbjct: 94 EVVALGLSASARYTVGQAV-------AYMAP---GSFAEYTVVPASIATPVPSVKPEYLT 143
Query: 126 FVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAK----HVFGXXXX 180
+ + + TAY L E S GK +LV AGG G +QL+K HV G
Sbjct: 144 LLVSGT------TAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSS 197
Query: 181 XXXXXXXXLDLLRSLGADLAIDYTKENI-----EDLPEKFDVVFDAVGQC--DKALKAVK 233
L+SLG D I+Y E + ++ PE DVV+++VG D A+ A+
Sbjct: 198 DEKSA-----FLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALA 252
Query: 234 EGGRVVSI 241
GR++ I
Sbjct: 253 TKGRLIVI 260
>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From
Bacillus Thuringiensis
Length = 340
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 23/230 (10%)
Query: 6 YKEYGNSQSVLKFE-TNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIP 64
+ ++GN + VL+ E N+E L++++V ++++ +NP D + GA+ A PLP IP
Sbjct: 10 FHKFGNPKDVLQVEYKNIE--PLKDNEVFVRMLVRPINPSDLIPITGAY-AHRIPLPNIP 66
Query: 65 GYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKR-NGSLAEYTAVEENLLALKPKN 123
GY+ G+VE VG+ V + +G V P R G+ EY + + P +
Sbjct: 67 GYEGVGIVENVGAFVSRELIGKRVL----------PLRGEGTWQEYVKTSADFVVPIPDS 116
Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG-GVGTMVIQLAKHVFGXXXXXX 182
+ AA + + TA+ + +L++ G +G + QL++ +
Sbjct: 117 IDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVT 176
Query: 183 XXXXXXLDLLRSLGADLAIDYTK----ENIEDLPEKF--DVVFDAVGQCD 226
+LLR LGA ID + E + +L D D++G D
Sbjct: 177 RNNKHTEELLR-LGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPD 225
>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
pdb|4EJM|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
Bound To Nadp
Length = 370
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 102/253 (40%), Gaps = 44/253 (17%)
Query: 21 NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
NV +P D +L+KV A + D + G F +T P G++ G+V + GS V+
Sbjct: 39 NVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPSTP---PVTLGHEFCGIVVEAGSAVR 95
Query: 81 KFKVGDEVYGDINEKALDHPK------------------RNGSLAEYTAVE-----ENLL 117
G + GD N P+ R+G AEY V E L
Sbjct: 96 DIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPL 155
Query: 118 ALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGX 177
L P + +F E PLA G++ S AG ++ +LGG G +G + +QLA+
Sbjct: 156 TLDPVHGAFCE----PLA--CCLHGVDLSGIKAGSTVAILGG-GVIGLLTVQLARLAGAT 208
Query: 178 XXXXXXXXXXXLDLLRSLGADLAIDYTKENIED--------LPEKFDVVFDAVGQCD--- 226
L +GA +D + ++ + +P DVV + G +
Sbjct: 209 TVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETVK 268
Query: 227 KALKAVKEGGRVV 239
++ + K GG VV
Sbjct: 269 QSTRLAKAGGTVV 281
>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From
Sulfolobus Solfataricus
Length = 344
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 139/334 (41%), Gaps = 55/334 (16%)
Query: 21 NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
+V +P + ++VLI++ A + D + G + LP I G++ AG + +VG ++
Sbjct: 20 DVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVG-ELA 78
Query: 81 KFKVGDEV-----YGDINEKALDHPK-------------RNGSLAEYTAVEENLLALKPK 122
K K GD V +GD+ + K NG +EY V+ + +K
Sbjct: 79 KVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKLN 138
Query: 123 NLSFVEAASLPLATETAYEGLER-----SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGX 177
+LS VEAA L A T+ + + S F+ + ++++ G GG+ IQ+ K +
Sbjct: 139 SLSPVEAAPLADAGTTSMGAIRQALPFISKFA--EPVVIVNGIGGLAVYTIQILKALMKN 196
Query: 178 XXXXXXXXXXXLDLLRSLGADLAIDYTKE--NIEDLPEKF------DVVFDAVGQ----- 224
R +L DY E + E L K + D VG
Sbjct: 197 ITIVGISRSKK---HRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGTEETTY 253
Query: 225 -------CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSD-GSI--LEKLNPYFESGKVK 274
+ A+ V G+ VS+ T + +L S+ GS+ LE + ESGK+K
Sbjct: 254 NLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGKIK 313
Query: 275 AIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
I P +AF++L+ R G+ VI P
Sbjct: 314 PYII---KVPLDDINKAFTNLDEGRVDGRQVITP 344
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 23/199 (11%)
Query: 23 EVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKF 82
E+ +++ ++ L+ + + D G F + T+ G++ G+V+++G+ V
Sbjct: 20 ELRAIKPNEALLDMEYCGVCHTDLHVAAGDFG---NKAGTVLGHEGIGIVKEIGADVSSL 76
Query: 83 KVGDEV--------YGDI------NEKALDHPKR-----NGSLAEYTAVEENLLALKPKN 123
+VGD V G NE K +G +AE V + P
Sbjct: 77 QVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDG 136
Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXX 183
L +EA+S+ A T Y+ ++ S G ++ G AGG+G + IQ AK+VFG
Sbjct: 137 LDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFG-AGGLGNLAIQYAKNVFGAKVIAVD 195
Query: 184 XXXXXLDLLRSLGADLAID 202
L+L + +GAD+ I+
Sbjct: 196 INQDKLNLAKKIGADVTIN 214
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 147/333 (44%), Gaps = 49/333 (14%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD------SPLPTIPGYDVAGVVEKV 75
+ VP + QVLIKV AA + D G F LP G+++AG +E+V
Sbjct: 18 IGVPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEV 77
Query: 76 GSQVKKFKVGDEV------------YGDINEKAL-DHPKR-----NGSLAEYTAVEENLL 117
G +V + GD V Y I E+ L D P+ +G+ AEY V
Sbjct: 78 GDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKY 137
Query: 118 ALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGX 177
K + L+ VEAA L + T Y + +++ K++LV+G GG+GT +Q+AK V G
Sbjct: 138 XYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTXAVQIAKAVSGA 197
Query: 178 XXXXXXXXXXXLDLLRSLGADLAIDYTKEN----IEDLPEK--FDVVFDAVGQCDKAL-- 229
++ + GAD I+ + ++ I + E D V D + +K L
Sbjct: 198 TIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVID-LNNSEKTLSV 256
Query: 230 --KAVKEGGRVVSI--IGSVTPPASSFVLTSD----GSILEKLNPYF------ESGKVKA 275
KA+ + G+ V + G+ + + S+ GS++ + + E+GKVK
Sbjct: 257 YPKALAKQGKYVXVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIXRLAEAGKVKP 316
Query: 276 IIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
I + EA +LE+ +A G+ V+ P
Sbjct: 317 XITKT--XKLEEANEAIDNLENFKAIGRQVLIP 347
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 23/199 (11%)
Query: 23 EVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKF 82
E+ +++ ++ L+ + + D G + + T+ G++ G+V+++G+ V
Sbjct: 20 ELRAIKPNEALLDMEYCGVCHTDLHVAAGDYG---NKAGTVLGHEGIGIVKEIGADVSSL 76
Query: 83 KVGDEV--------YGDI------NEKALDHPKR-----NGSLAEYTAVEENLLALKPKN 123
+VGD V G NE K +G +AE V + P
Sbjct: 77 QVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDG 136
Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXX 183
L +EA+S+ A T Y+ ++ S G ++ G AGG+G + IQ AK+VFG
Sbjct: 137 LDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFG-AGGLGNLAIQYAKNVFGAKVIAVD 195
Query: 184 XXXXXLDLLRSLGADLAID 202
L+L + +GAD+ I+
Sbjct: 196 INQDKLNLAKKIGADVIIN 214
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 134/326 (41%), Gaps = 49/326 (15%)
Query: 15 VLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEK 74
V+K+E + VPS+ E+++LIK +N I+ G + P + G + +G V
Sbjct: 22 VIKYE-DYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPCEK---PYVLGREASGTVVA 77
Query: 75 VGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK-PK-----NLSFVE 128
G V F+VGD+V N + A+Y+ + +K PK L
Sbjct: 78 KGKGVTNFEVGDQV----------AYISNSTFAQYSKISSQGPVMKLPKGTSDEELKLYA 127
Query: 129 AASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXX 188
A L + T ++ E G +L+ AGGVG ++ QL K + G
Sbjct: 128 AGLLQVLTALSFTN-EAYHVKKGDYVLLFAAAGGVGLILNQLLK-MKGAHTIAVASTDEK 185
Query: 189 LDLLRSLGADLAIDYTKENIEDLPEKF------DVVFDAVGQ--CDKALKAVKEGGRVVS 240
L + + GA+ I+ +KE+I KF D FD+VG+ + +L A+K G VS
Sbjct: 186 LKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVS 245
Query: 241 I--IGSVTPPASSFVLTSDGSILEKLNPY----------FESGKVKAIIDPK-------G 281
+ PP S L+ L + Y + S + +++ K
Sbjct: 246 FGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKIYK 305
Query: 282 PFPFSQTLEAFSHLESSRATGKVVIH 307
+P A + +ES + GK+V+
Sbjct: 306 TYPLRDYRTAAADIESRKTVGKLVLE 331
>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
pdb|1XA0|B Chain B, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
Length = 328
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 92/210 (43%), Gaps = 25/210 (11%)
Query: 27 LREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL----PTIPGYDVAGVVEKVGSQVKKF 82
L E VL++V +++N D G S D + P +PG D+AGVV V SQ +F
Sbjct: 28 LPEGDVLVRVHYSSVNYKD-----GLASIPDGKIVKTXPFVPGIDLAGVV--VSSQHPRF 80
Query: 83 KVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETA--- 139
+ GDEV E + H G +EY + L PK L+ EA ++ A TA
Sbjct: 81 REGDEVIATGYEIGVTH---FGGYSEYARLHGEWLVPLPKGLTLKEAXAIGTAGFTAALS 137
Query: 140 YEGLERSAFSAGKS-ILVLGGAGGVGTMVIQ-LAKHVFGXXXXXXXXXXXXLDLLRSLGA 197
LE + + +LV G GGVG++ + LAK G D LR LGA
Sbjct: 138 IHRLEEHGLTPERGPVLVTGATGGVGSLAVSXLAKR--GYTVEASTGKAAEHDYLRVLGA 195
Query: 198 DLAI---DYTKENIEDL-PEKFDVVFDAVG 223
+ D E I L +++ D VG
Sbjct: 196 KEVLAREDVXAERIRPLDKQRWAAAVDPVG 225
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 138/345 (40%), Gaps = 53/345 (15%)
Query: 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
M A ++K+ G V + V+V S QV ++ A +N +D G PL
Sbjct: 3 MAAVIHKKGGPDNFVWE---EVKVGSPGPGQVRLRNTAIGVNFLDTYHRAG----IPHPL 55
Query: 61 -----PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEEN 115
P + G++ A VVE+VG V F VG+ V + P E E
Sbjct: 56 VVGEPPIVVGFEAAAVVEEVGPGVTDFTVGERVCTCL-------PPLGAYSQERLYPAEK 108
Query: 116 LLALKPKNLSF--VEAASLPLATETAYEGLERS-AFSAGKSILVLGGAGGVGTMVIQLAK 172
L+ + PK+L V A L L TA L ++ G +L+ AGG+G +++ A+
Sbjct: 109 LIKV-PKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWAR 167
Query: 173 HVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKF------DVVFDAVGQ-- 224
H G + R LG I+Y+ ++ ++ + DVV+D++G+
Sbjct: 168 H-LGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDT 226
Query: 225 CDKALKAVKEGG---------------RVVSIIGS-----VTPPASSFVLTSDGSILEKL 264
K+L ++ G RVV +G +T PA +++ I E
Sbjct: 227 LQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGS 286
Query: 265 NPYFESGKVKAIIDPKG-PFPFSQTLEAFSHLESSRATGKVVIHP 308
F++ K + FP + A ++ + G +V+ P
Sbjct: 287 KCLFDAVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVLLP 331
>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|B Chain B, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|C Chain C, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|D Chain D, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|3JV7|A Chain A, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|B Chain B, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|C Chain C, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|D Chain D, Structure Of Adh-A From Rhodococcus Ruber
Length = 345
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 109/276 (39%), Gaps = 39/276 (14%)
Query: 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
MKA Y E G+ V+ T P+ ++L+KV AA L D M + L
Sbjct: 1 MKAVQYTEIGSEPVVVDIPT----PTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGL 56
Query: 61 PTIPGYDVAGVVEKVGSQVKKFKVGDEV--YGDINEKALDHPKRN--------------- 103
P G++ G V ++G V F VGD V YG A R
Sbjct: 57 PLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITP 116
Query: 104 ------GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER--SAFSAGKSIL 155
GS+AEY V+ + +L V AA L A T Y + R G + +
Sbjct: 117 PGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAV 176
Query: 156 VLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDY---TKENIEDLP 212
V+G GG+G + IQ+ + V L L R +GAD A+ + I +L
Sbjct: 177 VIG-VGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELT 235
Query: 213 --EKFDVVFDAVG---QCDKALKAVKEGGRVVSIIG 243
+ VFD VG D A + V G +S++G
Sbjct: 236 GGQGATAVFDFVGAQSTIDTAQQVVAVDGH-ISVVG 270
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 111/270 (41%), Gaps = 32/270 (11%)
Query: 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
++A VY +G+ V++ + N+E+ ++R V +K++AA +NP D + G + L
Sbjct: 27 VRALVYGHHGDPAKVVELK-NLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPE-L 84
Query: 61 PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEY---TAVEENLL 117
P + G + V VGS V K GD V N L + E L
Sbjct: 85 PAVGGNEGVAQVVAVGSNVTGLKPGDWVI-----------PANAGLGTWRTEAVFSEEAL 133
Query: 118 ALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG 176
P ++ AA+L + TAY L + G S++ GVG VIQ+A G
Sbjct: 134 IQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAA-ALG 192
Query: 177 XXXXXXXXXXXXL----DLLRSLGADLAID-------YTKENIEDLPEKFDVVFDAVG-- 223
+ D L+SLGA+ I K +D+P+ + + VG
Sbjct: 193 LRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQP-RLALNCVGGK 251
Query: 224 QCDKALKAVKEGGRVVSIIGSVTPPASSFV 253
+ L+ + GG +V+ G P + V
Sbjct: 252 SSTELLRQLARGGTMVTYGGMAKQPVVASV 281
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 111/270 (41%), Gaps = 32/270 (11%)
Query: 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
++A VY +G+ V++ + N+E+ ++R V +K++AA +NP D + G + L
Sbjct: 14 VRALVYGHHGDPAKVVELK-NLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPE-L 71
Query: 61 PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEY---TAVEENLL 117
P + G + V VGS V K GD V N L + E L
Sbjct: 72 PAVGGNEGVAQVVAVGSNVTGLKPGDWVI-----------PANAGLGTWRTEAVFSEEAL 120
Query: 118 ALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG 176
P ++ AA+L + TAY L + G S++ GVG VIQ+A G
Sbjct: 121 IQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAA-ALG 179
Query: 177 XXXXXXXXXXXXL----DLLRSLGADLAID-------YTKENIEDLPEKFDVVFDAVG-- 223
+ D L+SLGA+ I K +D+P+ + + VG
Sbjct: 180 LRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQP-RLALNCVGGK 238
Query: 224 QCDKALKAVKEGGRVVSIIGSVTPPASSFV 253
+ L+ + GG +V+ G P + V
Sbjct: 239 SSTELLRQLARGGTMVTYGGMAKQPVVASV 268
>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 106/247 (42%), Gaps = 38/247 (15%)
Query: 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLP 61
KAWV K G + ++ P E +V+++V A LN D LGA+ P P
Sbjct: 2 KAWVLKRLGGPLEL----VDLPEPEAEEGEVVLRVEAVGLNFADHLXRLGAYLTRLHP-P 56
Query: 62 TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKP 121
IP V Y + + G LAE AV + L P
Sbjct: 57 FIP------------GXEVVGVVEGRRYAALVPQ--------GGLAERVAVPKGALLPLP 96
Query: 122 KNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXX 181
+ LS EAA+ P++ TAY L+R+ G+ +LV AG +GT +Q+A+ G
Sbjct: 97 EGLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVAR-AXGLRVLA 155
Query: 182 XXXXXXXLDLLRSLGADLAIDYTKENIEDLPEK------FDVVFDAVG-QCDKALKAVKE 234
L L +LGA+ A Y ++PE+ D+V + G + +++L +
Sbjct: 156 AASRPEKLALPLALGAEEAATYA-----EVPERAKAWGGLDLVLEVRGKEVEESLGLLAH 210
Query: 235 GGRVVSI 241
GGR+V I
Sbjct: 211 GGRLVYI 217
>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
Length = 356
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 31/225 (13%)
Query: 16 LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRM----LGAFSATDSPLPTIPGYDVAGV 71
L+ E N +P ++VL+++ + + D +G F P + G++ +G
Sbjct: 19 LRLE-NYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKK---PMVLGHEASGT 74
Query: 72 VEKVGSQVKKFKVGDEV------------YGDINEKALD-------HPKRNGSLAEYTAV 112
VEKVGS VK K GD V + + L P +G+L +
Sbjct: 75 VEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKH 134
Query: 113 EENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLA 171
P N++F E A + PL+ R + G +LV G AG +G + + +A
Sbjct: 135 NAAFCYKLPDNVTFEEGALIEPLSV--GIHACRRGGVTLGHKVLVCG-AGPIGMVTLLVA 191
Query: 172 KHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFD 216
K + L + +GADL + +KE+ +++ K +
Sbjct: 192 KAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE 236
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf
Whitefly
Length = 352
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 114/285 (40%), Gaps = 42/285 (14%)
Query: 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKR----MLGAFSAT 56
+ A +YK Q+ L+ E +P +ED+VL+++ + D + F
Sbjct: 6 LSAVLYK-----QNDLRLEQR-PIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVK 59
Query: 57 DSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVY---------------GDINEKA----L 97
D P + G++ +G V KVG VK K GD V G N
Sbjct: 60 D---PMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC 116
Query: 98 DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILV 156
P +G+LA Y + P N+S E A L PL+ R+ G ++LV
Sbjct: 117 ATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLS--VGVHACRRAGVQLGTTVLV 174
Query: 157 LGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGAD--LAIDYTKENIEDLPEK 214
+ GAG +G +V LA +G L++ ++ GAD L +D KE + E+
Sbjct: 175 I-GAGPIG-LVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIER 232
Query: 215 FDVVFDAVGQCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGS 259
+ A+G + ++I ++T + +L GS
Sbjct: 233 ---IRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGS 274
>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
Length = 356
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 23/176 (13%)
Query: 61 PTIPGYDVAGVVEKVGSQVKKFKVGDEV---------------YGDINEKA----LDHPK 101
P + G++ +G VEKVGS VK K GD V G N P
Sbjct: 64 PXVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKXGRYNLSPSIFFCATPP 123
Query: 102 RNGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGA 160
+G+L + P N++F E A + PL+ R + G +LV G A
Sbjct: 124 DDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSV--GIHACRRGGVTLGHKVLVCG-A 180
Query: 161 GGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFD 216
G +G + + +AK L + +GADL + +KE+ +++ K +
Sbjct: 181 GPIGXVTLLVAKAXGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE 236
>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
pdb|3TWO|B Chain B, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
Length = 348
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 31/168 (18%)
Query: 32 VLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV--- 88
VLI ++ A + D + + P IPG+++AG++++VG VKKFK+GD V
Sbjct: 32 VLIDILYAGICHSDIHSAYSEWK--EGIYPMIPGHEIAGIIKEVGKGVKKFKIGDVVGVG 89
Query: 89 -------------------------YGDINEKALDHPKRNGSLAEYTAVEENLLALKPKN 123
D + D+ G + V+EN + KN
Sbjct: 90 CFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKN 149
Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLA 171
+ A L A T Y L+ S + G + V G GG+G+M ++ A
Sbjct: 150 APLEKVAPLLCAGITTYSPLKFSKVTKGTKVGV-AGFGGLGSMAVKYA 196
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 29/172 (16%)
Query: 24 VPSLREDQVLIKVVAAALNPIDFKRM-LGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKF 82
VP ++L++V AA++ D A++ P + G++ +GVVE VG V++
Sbjct: 20 VPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRP 79
Query: 83 KVGDEV-------------------YGDINEKALDHPKRNGSLAEYTAVEENLLALKPKN 123
+VGD V + +N + L R+G AEY V + PK+
Sbjct: 80 QVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGV-DRDGGFAEYVVVPAENAWVNPKD 138
Query: 124 LSFVEAASL-PL--ATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAK 172
L F AA L P A T Y G + +GKS+L+ GAG +G M + +
Sbjct: 139 LPFEVAAILEPFGNAVHTVYAG----SGVSGKSVLIT-GAGPIGLMAAMVVR 185
>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
Length = 355
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 31/225 (13%)
Query: 16 LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRM----LGAFSATDSPLPTIPGYDVAGV 71
L+ E N +P ++VL+K+ + + D +G F P + G++ +G
Sbjct: 18 LRLE-NYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKK---PMVLGHEASGT 73
Query: 72 VEKVGSQVKKFKVGDEV------------YGDINEKALD-------HPKRNGSLAEYTAV 112
V KVGS V+ + GD V + I L P +G+L +
Sbjct: 74 VVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPDDGNLCRFYKH 133
Query: 113 EENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLA 171
N P N++F E A + PL+ R+ + G +LV GAG +G + + A
Sbjct: 134 NANFCYKLPDNVTFEEGALIEPLS--VGIHACRRAGVTLGNKVLVC-GAGPIGLVNLLAA 190
Query: 172 KHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFD 216
K + L + +GAD ++ + E+ E++ +K +
Sbjct: 191 KAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKVE 235
>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3T|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3U|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3U|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3V|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|1V3V|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|2DM6|A Chain A, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
pdb|2DM6|B Chain B, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
Length = 333
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 119/262 (45%), Gaps = 40/262 (15%)
Query: 2 KAWVYKEYGN---SQSVLKFETNVEVPSLREDQVLIKVVAAALNP---IDFKRML-GAFS 54
K+W K++ +QS + +T VE+P L+ +VL++ + +++P I KR+ GA
Sbjct: 9 KSWTLKKHFQGKPTQSDFELKT-VELPPLKNGEVLLEALFLSVDPYMRIASKRLKEGA-- 65
Query: 55 ATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEE 114
+ G VA VVE S+ F G V H +G E
Sbjct: 66 -------VMMGQQVARVVE---SKNSAFPAGSIVLA--QSGWTTHFISDGKGLE------ 107
Query: 115 NLLALKPKNLSFVEA-ASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAK 172
LL P L A ++ + TAY GL E G+++LV AG VG++V Q+AK
Sbjct: 108 KLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAK 167
Query: 173 HVFGXXXXXXXXXXXXLDLLRSLGADLAIDY-TKENIEDL-----PEKFDVVFDAVGQ-- 224
+ G + L+ +G D A +Y T ++E+ P+ +D FD VG
Sbjct: 168 -LKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEF 226
Query: 225 CDKALKAVKEGGRVVSIIGSVT 246
+ L +K+ G+ ++I G+++
Sbjct: 227 LNTVLSQMKDFGK-IAICGAIS 247
>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|B Chain B, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|C Chain C, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|D Chain D, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
Length = 351
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 87/211 (41%), Gaps = 33/211 (15%)
Query: 63 IPGYDVAGVVEKVGSQVKKFKVGDEV--------YGDINEKALDHPKRNGSLA------- 107
I G++ G V +VGS+VK FK GD V + + +A NG LA
Sbjct: 56 ILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNF 115
Query: 108 ------EYTAVEEN--LLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG 159
EY V + LA+ PK++ A + T + G E + G S++V+ G
Sbjct: 116 KDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIEMGSSVVVI-G 174
Query: 160 AGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKF---- 215
G VG M I AK ++ + GA ++Y +IED K
Sbjct: 175 IGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGK 234
Query: 216 --DVVFDAVGQCD---KALKAVKEGGRVVSI 241
D V A G + +A+K VK GG + +I
Sbjct: 235 GVDRVIMAGGGSETLSQAVKMVKPGGIISNI 265
>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1Y9E|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
Length = 330
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 61/137 (44%), Gaps = 10/137 (7%)
Query: 11 NSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD--SPLPTIPGYDV 68
N+ V + L +D VLIKV A + I++K L + + P I G D
Sbjct: 13 NADDVSVHVKTISTEDLPKDGVLIKV---AYSGINYKDGLAGKAGGNIVREYPLILGIDA 69
Query: 69 AGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVE 128
AG V V S +F GDEV E + R+G L+EY +V + L P+NLS E
Sbjct: 70 AGTV--VSSNDPRFAEGDEVIATSYELGV---SRDGGLSEYASVPGDWLVPLPQNLSLKE 124
Query: 129 AASLPLATETAYEGLER 145
A A TA + R
Sbjct: 125 AXVYGTAGFTAALSVHR 141
>pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
pdb|4EYE|B Chain B, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
Length = 342
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 43/318 (13%)
Query: 20 TNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKV--GS 77
T+VE P + V++ V AA + D+ G + P P +PG + AGVV GS
Sbjct: 39 TDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEP-PFVPGIETAGVVRSAPEGS 97
Query: 78 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATE 137
+K GD V A + G AE AV + + P L EA +L
Sbjct: 98 GIKP---GDRVM------AFNF---IGGYAERVAVAPSNILPTPPQLDDAEAVALIANYH 145
Query: 138 TAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLG 196
T Y R AG+++LVLG AGG+GT IQ+AK + G + ++S+G
Sbjct: 146 TMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSVG 204
Query: 197 ADLAIDYTKENIEDLPEK-----FDVVFDAVG--QCDKALKAVKEGGRVVSI-------- 241
AD+ + + + + E D+V D +G D A++ + GR++ +
Sbjct: 205 ADIVLPLEEGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFAAGGIP 264
Query: 242 ---IGSVTPPASSFVLTSDGSILEKLNPYF---ESGKVKAIIDPKGP-----FPFSQTLE 290
+ + +S + + G L Y ++G K + + P P S+ +
Sbjct: 265 TIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEGMRPPVSARIPLSEGRQ 324
Query: 291 AFSHLESSRATGKVVIHP 308
A + GK+V+ P
Sbjct: 325 ALQDFADGKVYGKMVLVP 342
>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 102/277 (36%), Gaps = 53/277 (19%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
VEV + +V IK+VAA + D + G A PLP I G++ AG+VE +G V
Sbjct: 26 VEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVA---PLPVIAGHEAAGIVESIGEGVTT 82
Query: 82 FKVGDEVY-----------------GDINEKALDHPK---RNG----------------- 104
+ GD+V G++ K L P+ ++G
Sbjct: 83 VRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIHHFLGT 142
Query: 105 -SLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGV 163
+ ++YT V+E +A + + T Y + A S + G GGV
Sbjct: 143 STFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGV 202
Query: 164 GTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAI---DYTKENIEDLPEK----FD 216
G VI K + +GA + DY K E L E D
Sbjct: 203 GLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVD 262
Query: 217 VVFDAVGQCDK---ALKAVKEGGRVVSIIGSVTPPAS 250
F+ +G+ D AL +E V I+G PP S
Sbjct: 263 FSFEVIGRLDTMVAALSCCQEAYGVSVIVG--VPPDS 297
>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
Length = 347
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 28/248 (11%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRM-LGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
V+VP +VLIKV+A ++ D ++ + P I G++VAG V ++G V+
Sbjct: 21 VDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVE 80
Query: 81 KFKVGDEVYGDIN---------EKALDHPKRN---------GSLAEYTAVEENLLALKPK 122
+VGD V + + + H +N G AEY V + PK
Sbjct: 81 GIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPK 140
Query: 123 NLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXX 182
++ E A+L A + + S GKS+L+ GAG +G + I +AK
Sbjct: 141 SIP-PEYATLQEPLGNAVDTVLAGPIS-GKSVLIT-GAGPLGLLGIAVAKASGAYPVIVS 197
Query: 183 XXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVV----FDAVGQCDKALKAVKEGGRV 238
+L + +GAD I+ +E++ + E D+ D + A KA+++G +
Sbjct: 198 EPSDFRRELAKKVGADYVINPFEEDV--VKEVXDITDGNGVDVFLEFSGAPKALEQGLQA 255
Query: 239 VSIIGSVT 246
V+ G V+
Sbjct: 256 VTPAGRVS 263
>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3
Length = 348
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 28/248 (11%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRM-LGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
V+VP +VLIKV+A ++ D ++ + P I G++VAG V ++G V+
Sbjct: 22 VDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVE 81
Query: 81 KFKVGDEVYGDIN---------EKALDHPKRN---------GSLAEYTAVEENLLALKPK 122
+VGD V + + + H +N G AEY V + PK
Sbjct: 82 GIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPK 141
Query: 123 NLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXX 182
++ E A+L A + + S GKS+L+ GAG +G + I +AK
Sbjct: 142 SIP-PEYATLQEPLGNAVDTVLAGPIS-GKSVLIT-GAGPLGLLGIAVAKASGAYPVIVS 198
Query: 183 XXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVV----FDAVGQCDKALKAVKEGGRV 238
+L + +GAD I+ +E++ + E D+ D + A KA+++G +
Sbjct: 199 EPSDFRRELAKKVGADYVINPFEEDV--VKEVXDITDGNGVDVFLEFSGAPKALEQGLQA 256
Query: 239 VSIIGSVT 246
V+ G V+
Sbjct: 257 VTPAGRVS 264
>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 102/277 (36%), Gaps = 53/277 (19%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
VEV + +V IK+VAA + D + G A PLP I G++ AG+VE +G V
Sbjct: 26 VEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVA---PLPVIAGHEAAGIVESIGEGVTT 82
Query: 82 FKVGDEVY-----------------GDINEKALDHPK---RNG----------------- 104
+ GD+V G++ K L P+ ++G
Sbjct: 83 VRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIHHFLGT 142
Query: 105 -SLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGV 163
+ ++YT V+E +A + + T Y + A S + G GGV
Sbjct: 143 STFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGV 202
Query: 164 GTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAI---DYTKENIEDLPEK----FD 216
G VI K + +GA + DY K E L E D
Sbjct: 203 GLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVD 262
Query: 217 VVFDAVGQCDK---ALKAVKEGGRVVSIIGSVTPPAS 250
F+ +G+ D AL +E V I+G PP S
Sbjct: 263 FSFEVIGRLDTMVAALSCCQEAYGVSVIVG--VPPDS 297
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 36/199 (18%)
Query: 24 VPSLR-EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKF 82
+P ++ +D+V +K+ ++ L D R+ F P G++ +G ++ VGS V
Sbjct: 19 IPEIKHQDEVRVKIASSGLCGSDLPRI---FKNGAHYYPITLGHEFSGYIDAVGSGVDDL 75
Query: 83 KVGDEV------------------YGDINEKALDHPKRNGSLAEYTAVE-ENLLALKPKN 123
GD V Y + +R+G AEY V+ +N+ AL P +
Sbjct: 76 HPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFAL-PTD 134
Query: 124 L-----SFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXX 178
+ +F+E ++ L +G E K+++++ GAG +G + IQ A +
Sbjct: 135 MPIEDGAFIEPITVGLHAFHLAQGCEN------KNVIII-GAGTIGLLAIQCAVALGAKS 187
Query: 179 XXXXXXXXXXLDLLRSLGA 197
L L +S GA
Sbjct: 188 VTAIDISSEKLALAKSFGA 206
>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|B Chain B, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|C Chain C, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|D Chain D, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
Length = 360
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 26/170 (15%)
Query: 63 IPGYDVAGVVEKVGSQVKKFKVGDEV--------YGDINEKALDHPKRNGSL-------- 106
I G++ G + KVGS VK+ KVGD+V +G+ E +P +G +
Sbjct: 56 ILGHEAVGQIVKVGSLVKRLKVGDKVIVPAITPDWGE-EESQRGYPMHSGGMLGGWKFSN 114
Query: 107 ------AEYTAVEE--NLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLG 158
+E V E LAL P+++ +A L T + G E + G ++ V+
Sbjct: 115 FKDGVFSEVFHVNEADANLALLPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVI- 173
Query: 159 GAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENI 208
G G VG M + A H+ D+ GA I+Y +I
Sbjct: 174 GIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDI 223
>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
pdb|1Y9A|C Chain C, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
Length = 360
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 26/170 (15%)
Query: 63 IPGYDVAGVVEKVGSQVKKFKVGDEV--------YGDINEKALDHPKRNGSL-------- 106
I G++ G + KVGS VK+ KVGD+V +G+ E +P +G +
Sbjct: 56 ILGHEAVGQIVKVGSLVKRLKVGDKVIVPAITPDWGE-EESQRGYPMHSGGMLGGWKFSN 114
Query: 107 ------AEYTAVEE--NLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLG 158
+E V E LAL P+++ +A L T + G E + G ++ V+
Sbjct: 115 FKDGVFSEVFHVNEADANLALLPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVI- 173
Query: 159 GAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENI 208
G G VG M + A H+ D+ GA I+Y +I
Sbjct: 174 GIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDI 223
>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense
pdb|1HT0|B Chain B, Human Gamma-2 Alcohol Dehydrogense
pdb|1U3W|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
pdb|1U3W|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
Length = 374
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 91/257 (35%), Gaps = 49/257 (19%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
VEV + +V IK+VAA + D + G +PLP I G++ AG+VE VG V
Sbjct: 26 VEVAPPKAHEVRIKMVAAGICRSDEHVVSGNLV---TPLPVILGHEAAGIVESVGEGVTT 82
Query: 82 FKVGDEV--------------------YGDINE-------------------KALDHPKR 102
K GD+V Y N+ K + H
Sbjct: 83 VKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRGTLQDGTRRFTCSGKPIHHFVG 142
Query: 103 NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGG 162
+ ++YT V+EN +A + + T Y + A S + G GG
Sbjct: 143 VSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGG 202
Query: 163 VGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAI---DYTKENIEDLPEK----F 215
VG V+ K + LGA I DY K E L E
Sbjct: 203 VGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGV 262
Query: 216 DVVFDAVGQCDKALKAV 232
D F+ +GQ D + ++
Sbjct: 263 DFSFEVIGQLDTMMASL 279
>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of C. Beijerinckii
Adh By T. Brockii Adh
Length = 351
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 84/211 (39%), Gaps = 33/211 (15%)
Query: 63 IPGYDVAGVVEKVGSQVKKFKVGDEV--------YGDINEKALDHPKRNGSLA------- 107
I G++ G V +VGS+VK FK GD V + + +A NG LA
Sbjct: 56 ILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNF 115
Query: 108 ------EYTAVEEN--LLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG 159
EY V + LA+ PK++ A + T + G E + G ++ VL G
Sbjct: 116 KDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIELGATVAVL-G 174
Query: 160 AGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIE----DLPE-- 213
G VG M + AK +D + GA ++Y IE +L E
Sbjct: 175 IGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVNYKDGPIESQIMNLTEGK 234
Query: 214 KFDVVFDAVGQCD---KALKAVKEGGRVVSI 241
D A G D A+K VK GG + ++
Sbjct: 235 GVDAAIIAGGNADIMATAVKIVKPGGTIANV 265
>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|B Chain B, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|C Chain C, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|D Chain D, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
Length = 328
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 11/118 (9%)
Query: 138 TAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLG 196
TAY GL E G++++V AG VG++V Q+AK + G + L+ LG
Sbjct: 127 TAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAK-LKGCKVVGAVGSDEKVAYLQKLG 185
Query: 197 ADLAIDY-TKENIEDL-----PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT 246
D+ +Y T E++E+ P+ +D FD VG + + +K+ GR ++I G+++
Sbjct: 186 FDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGR-IAICGAIS 242
>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
pdb|3QJ5|B Chain B, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
Length = 374
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
KA V E G S+ +EV + +V IK++A A+ D + GA +
Sbjct: 8 CKAAVAWEAGKPLSI----EEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCF 61
Query: 61 PTIPGYDVAGVVEKVGSQVKKFKVGDEV 88
P I G++ AG+VE VG V K K GD V
Sbjct: 62 PVILGHEGAGIVESVGEGVTKLKAGDTV 89
>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|B Chain B, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|C Chain C, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|D Chain D, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
Length = 349
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 11/118 (9%)
Query: 138 TAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLG 196
TAY GL E G++++V AG VG++V Q+AK + G + L+ LG
Sbjct: 148 TAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAK-LKGCKVVGAVGSDEKVAYLQKLG 206
Query: 197 ADLAIDY-TKENIEDL-----PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT 246
D+ +Y T E++E+ P+ +D FD VG + + +K+ GR ++I G+++
Sbjct: 207 FDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGR-IAICGAIS 263
>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
pdb|1MC5|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
Length = 374
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
KA V E G S+ +EV + +V IK++A A+ D + GA +
Sbjct: 8 CKAAVAWEAGKPLSI----EEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCF 61
Query: 61 PTIPGYDVAGVVEKVGSQVKKFKVGDEV 88
P I G++ AG+VE VG V K K GD V
Sbjct: 62 PVILGHEGAGIVESVGEGVTKLKAGDTV 89
>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1TEH|B Chain B, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1M6H|A Chain A, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6H|B Chain B, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6W|A Chain A, Binary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase And 12-Hydroxydodecanoic
Acid
pdb|1M6W|B Chain B, Binary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase And 12-Hydroxydodecanoic
Acid
pdb|1MA0|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic
Acid
pdb|1MA0|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic
Acid
pdb|1MP0|A Chain A, Binary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad(H)
pdb|1MP0|B Chain B, Binary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad(H)
pdb|2FZE|A Chain A, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
pdb|2FZE|B Chain B, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
Length = 373
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
KA V E G S+ +EV + +V IK++A A+ D + GA +
Sbjct: 7 CKAAVAWEAGKPLSI----EEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCF 60
Query: 61 PTIPGYDVAGVVEKVGSQVKKFKVGDEV 88
P I G++ AG+VE VG V K K GD V
Sbjct: 61 PVILGHEGAGIVESVGEGVTKLKAGDTV 88
>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|B Chain B, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|C Chain C, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|D Chain D, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1KEV|A Chain A, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|B Chain B, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|C Chain C, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|D Chain D, Structure Of Nadp-Dependent Alcohol Dehydrogenase
Length = 351
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 24/133 (18%)
Query: 63 IPGYDVAGVVEKVGSQVKKFKVGDEV--------YGDINEKALDHPKRNGSLA------- 107
I G++ G V +VGS+VK FK GD V + + +A NG LA
Sbjct: 56 ILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNF 115
Query: 108 ------EYTAVEEN--LLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG 159
EY V + LA+ PK++ A + T + G E + G S++V+ G
Sbjct: 116 KDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVI-G 174
Query: 160 AGGVGTMVIQLAK 172
G VG M I AK
Sbjct: 175 IGAVGLMGIAGAK 187
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 106/258 (41%), Gaps = 48/258 (18%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRM-LGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
V+VP +VLIKV+A ++ D ++ + P I G++VAG V +VG V+
Sbjct: 22 VDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVE 81
Query: 81 KFKVGDEVYGDIN-----EKALDHPK-------------RNGSLAEYTAVEENLLALKPK 122
+VGD + + + A H + +G A Y V PK
Sbjct: 82 DLQVGDYISVETHIVCGKCYACKHNRYHVCQNTKIFGVDMDGVFAHYAIVPAKNAWKNPK 141
Query: 123 NLSFVEAASL--PL--ATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXX 178
++ E A+L PL A +T G AG+S L+ GAG +G + I +AK
Sbjct: 142 DMP-PEYAALQEPLGNAVDTVLAGP-----IAGRSTLIT-GAGPLGLLGIAVAK----AS 190
Query: 179 XXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDV-VFDAVG------------QC 225
+ R L + DY E+ P KF + + D G
Sbjct: 191 GAYPVIVSEPSEFRRKLAKKVGADYVVNPFEEDPVKFVMDITDGAGVEVFLEFSGAPKAL 250
Query: 226 DKALKAVKEGGRVVSIIG 243
++ LKAV GGR VS++G
Sbjct: 251 EQGLKAVTPGGR-VSLLG 267
>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDY|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 96/279 (34%), Gaps = 54/279 (19%)
Query: 21 NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
+VEV + +V IK+VA + D + G +PLP I G++ AG+VE VG V
Sbjct: 25 DVEVAPPKAYEVRIKMVAVGICHTDDHVVSGNLV---TPLPVILGHEAAGIVESVGEGVT 81
Query: 81 KFKVGDEV--------------------YGDINE-------------------KALDHPK 101
K GD+V Y N+ K + H
Sbjct: 82 TVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFL 141
Query: 102 RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
+ ++YT V+EN +A + + T Y A S + G G
Sbjct: 142 GTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLG 201
Query: 162 GVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAI---DYTKENIEDLPEK---- 214
GVG + K + LGA I DY K E L E
Sbjct: 202 GVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGG 261
Query: 215 FDVVFDAVGQCDK---ALKAVKEGGRVVSIIGSVTPPAS 250
D F+ +G+ D +L E I+G PPAS
Sbjct: 262 VDFSFEVIGRLDTMMASLLCCHEACGTSVIVG--VPPAS 298
>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
pdb|1HTB|B Chain B, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
Length = 374
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 96/279 (34%), Gaps = 54/279 (19%)
Query: 21 NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
+VEV + +V IK+VA + D + G +PLP I G++ AG+VE VG V
Sbjct: 25 DVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLV---TPLPVILGHEAAGIVESVGEGVT 81
Query: 81 KFKVGDEV--------------------YGDINE-------------------KALDHPK 101
K GD+V Y N+ K + H
Sbjct: 82 TVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFL 141
Query: 102 RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
+ ++YT V+EN +A + + T Y A S + G G
Sbjct: 142 GTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLG 201
Query: 162 GVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAI---DYTKENIEDLPEK---- 214
GVG + K + LGA I DY K E L E
Sbjct: 202 GVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGG 261
Query: 215 FDVVFDAVGQCDK---ALKAVKEGGRVVSIIGSVTPPAS 250
D F+ +G+ D +L E I+G PPAS
Sbjct: 262 VDFSFEVIGRLDTMMASLLCCHEACGTSVIVG--VPPAS 298
>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
Length = 352
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 65/170 (38%), Gaps = 26/170 (15%)
Query: 63 IPGYDVAGVVEKVGSQVKKFKVGDEVY----------GDINEKALDHPK----------- 101
I G++ G V +VGS+VK FK GD V ++ H
Sbjct: 56 ILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNV 115
Query: 102 RNGSLAEYTAVEE---NLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLG 158
++G E+ V + NL L PK + A +P T + G E + G ++ V+
Sbjct: 116 KDGVFGEFFHVNDADMNLAHL-PKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVI- 173
Query: 159 GAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENI 208
G G VG M + A H+ D+ GA I+Y +I
Sbjct: 174 GIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDI 223
>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDX|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|3HUD|A Chain A, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|3HUD|B Chain B, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|1DEH|A Chain A, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1DEH|B Chain B, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1HSZ|A Chain A, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1HSZ|B Chain B, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1U3U|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3U|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3V|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
pdb|1U3V|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
Length = 374
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 96/279 (34%), Gaps = 54/279 (19%)
Query: 21 NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
+VEV + +V IK+VA + D + G +PLP I G++ AG+VE VG V
Sbjct: 25 DVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLV---TPLPVILGHEAAGIVESVGEGVT 81
Query: 81 KFKVGDEV--------------------YGDINE-------------------KALDHPK 101
K GD+V Y N+ K + H
Sbjct: 82 TVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFL 141
Query: 102 RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
+ ++YT V+EN +A + + T Y A S + G G
Sbjct: 142 GTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLG 201
Query: 162 GVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAI---DYTKENIEDLPEK---- 214
GVG + K + LGA I DY K E L E
Sbjct: 202 GVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGG 261
Query: 215 FDVVFDAVGQCDK---ALKAVKEGGRVVSIIGSVTPPAS 250
D F+ +G+ D +L E I+G PPAS
Sbjct: 262 VDFSFEVIGRLDTMMASLLCCHEACGTSVIVG--VPPAS 298
>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|B Chain B, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|C Chain C, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|D Chain D, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1BXZ|A Chain A, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|B Chain B, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|C Chain C, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|D Chain D, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
Length = 352
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 84/211 (39%), Gaps = 33/211 (15%)
Query: 63 IPGYDVAGVVEKVGSQVKKFKVGDEV--------YGDINEKALDHPKRNGSLA--EYTAV 112
I G++ G V +VGS+VK FK GD V + + H G LA +++ V
Sbjct: 56 ILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNV 115
Query: 113 EENL-------------LALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG 159
++ + LA PK + A +P T + G E + G ++ VL G
Sbjct: 116 KDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVL-G 174
Query: 160 AGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIE----DLPE-- 213
G VG M + AK +D + GA ++Y IE +L E
Sbjct: 175 IGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVNYKDGPIESQIMNLTEGK 234
Query: 214 KFDVVFDAVGQCD---KALKAVKEGGRVVSI 241
D A G D A+K VK GG + ++
Sbjct: 235 GVDAAIIAGGNADIMATAVKIVKPGGTIANV 265
>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDZ|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 96/279 (34%), Gaps = 54/279 (19%)
Query: 21 NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
+VEV + +V IK+VA + D + G +PLP I G++ AG+VE VG V
Sbjct: 25 DVEVAPPKAYEVRIKMVAVGICGTDDHVVSGNLV---TPLPVILGHEAAGIVESVGEGVT 81
Query: 81 KFKVGDEV--------------------YGDINE-------------------KALDHPK 101
K GD+V Y N+ K + H
Sbjct: 82 TVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFL 141
Query: 102 RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
+ ++YT V+EN +A + + T Y A S + G G
Sbjct: 142 GTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLG 201
Query: 162 GVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAI---DYTKENIEDLPEK---- 214
GVG + K + LGA I DY K E L E
Sbjct: 202 GVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGG 261
Query: 215 FDVVFDAVGQCDK---ALKAVKEGGRVVSIIGSVTPPAS 250
D F+ +G+ D +L E I+G PPAS
Sbjct: 262 VDFSFEVIGRLDTMMASLLCCHEACGTSVIVG--VPPAS 298
>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1HSO|B Chain B, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1U3T|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
pdb|1U3T|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
Length = 374
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
VEV + +V IK+VA + D + G +PLP I G++ AG+VE VG V
Sbjct: 26 VEVAPPKAHEVRIKMVAVGICGTDDHVVSGTMV---TPLPVILGHEAAGIVESVGEGVTT 82
Query: 82 FKVGDEV 88
K GD+V
Sbjct: 83 VKPGDKV 89
>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV6|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV7|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
pdb|1QV7|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
Length = 374
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 97/278 (34%), Gaps = 54/278 (19%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
VEV + +V IK+VA + D + + G +PLP I G++ AG+VE +G V
Sbjct: 26 VEVAPPKAHEVRIKMVATGICRSDDQVVSGTLV---TPLPVIAGHEAAGIVESIGEGVTT 82
Query: 82 FKVGDEVYGDINEKA-----LDHPKRN--------------------------------- 103
+ GD+V + HP+ N
Sbjct: 83 VRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLG 142
Query: 104 -GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGG 162
+ ++YT V+E +A + + T Y + A S + G GG
Sbjct: 143 TSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGG 202
Query: 163 VGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAI---DYTKENIEDLPEK----F 215
VG VI K + +GA + DY K E L E
Sbjct: 203 VGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGV 262
Query: 216 DVVFDAVGQCD---KALKAVKEGGRVVSIIGSVTPPAS 250
D F+ +G+ D AL +E V I+G PP S
Sbjct: 263 DFSFEVIGRLDTMVTALSCCQEAYGVSVIVG--VPPDS 298
>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double
Mutant Of Gly 293 Ala And Pro 295 Thr
pdb|1QLJ|A Chain A, Horse Liver Alcohol Dehydrogenase Apo Enzyme Double Mutant
Of Gly 293 Ala And Pro 295 Thr
Length = 374
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 100/282 (35%), Gaps = 53/282 (18%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
VEV + +V IK+VA + D + G +PLP I G++ AG+VE +G V
Sbjct: 26 VEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV---TPLPVIAGHEAAGIVESIGEGVTT 82
Query: 82 FKVGDEVYGDINEKA-----LDHPKRN--------------------------------- 103
+ GD+V + HP+ N
Sbjct: 83 VRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLG 142
Query: 104 -GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGG 162
+ ++YT V+E +A + + T Y + A S + G GG
Sbjct: 143 TSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGG 202
Query: 163 VGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAI---DYTKENIEDLPEK----F 215
VG VI K + +GA + DY K E L E
Sbjct: 203 VGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGV 262
Query: 216 DVVFDAVGQCD---KALKAVKEGGRVVSIIGSVTPPASSFVL 254
D F+ +G+ D AL +E VS+I +VTP + + +
Sbjct: 263 DFSFEVIGRLDTMVTALSCCQE-AYGVSVIVAVTPDSQNLSM 303
>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
And Inhibitor
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
And Inhibitor
Length = 376
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD----SPLPTIPGYDVAGVVEKVGS 77
+EV + +V I+V+A + P D +ATD + P + G++ AG+VE VG
Sbjct: 26 IEVSPPKACEVRIQVIATCVCPTDI-------NATDPKKKALFPVVLGHECAGIVESVGP 78
Query: 78 QVKKFKVGDEV 88
V FK GD+V
Sbjct: 79 GVTNFKPGDKV 89
>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|B Chain B, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|C Chain C, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|D Chain D, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
Length = 352
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 86/211 (40%), Gaps = 33/211 (15%)
Query: 63 IPGYDVAGVVEKVGSQVKKFKVGDEV--------YGDINEKALDHPKRNGSLA--EYTAV 112
I G++ G V +VGS+VK FK GD V + + H G LA +++ V
Sbjct: 56 ILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNV 115
Query: 113 EENL-------------LALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG 159
++ + LA PK + A +P T + G E + G S++V+ G
Sbjct: 116 KDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIEMGSSVVVI-G 174
Query: 160 AGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKF---- 215
G VG M I AK ++ + GA ++Y +I D K
Sbjct: 175 IGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIVDQVMKLTNGK 234
Query: 216 --DVVFDAVGQCD---KALKAVKEGGRVVSI 241
D V A G + +A+K VK GG + +I
Sbjct: 235 GVDRVIMAGGGSETLSQAVKMVKPGGIISNI 265
>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|B Chain B, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|C Chain C, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|D Chain D, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
Length = 352
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 84/211 (39%), Gaps = 33/211 (15%)
Query: 63 IPGYDVAGVVEKVGSQVKKFKVGDEV--------YGDINEKALDHPKRNGSLA--EYTAV 112
I G++ G V +VGS+VK FK GD V + + H G LA +++ V
Sbjct: 56 ILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNV 115
Query: 113 EENL-------------LALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG 159
++ + LA PK + A +P T + G E + G ++ VL G
Sbjct: 116 KDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVL-G 174
Query: 160 AGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIE----DLPE-- 213
G VG M + AK +D + GA ++Y IE +L E
Sbjct: 175 IGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVNYKDGPIESQIMNLTEGK 234
Query: 214 KFDVVFDAVGQCD---KALKAVKEGGRVVSI 241
D A G D A+K VK GG + ++
Sbjct: 235 GVDAAIIAGGNADIMATAVKIVKPGGTIANV 265
>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|B Chain B, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|C Chain C, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|D Chain D, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
Length = 351
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 24/133 (18%)
Query: 63 IPGYDVAGVVEKVGSQVKKFKVGDEV--------YGDINEKALDHPKRNGSLA------- 107
I G++ G V +VGS+VK FK GD V + + +A NG LA
Sbjct: 56 ILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFPQHSNGMLAGWKFSNF 115
Query: 108 ------EYTAVEEN--LLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG 159
EY V + LA+ PK++ A + T + G E + G S++V+ G
Sbjct: 116 KDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVI-G 174
Query: 160 AGGVGTMVIQLAK 172
G VG M I AK
Sbjct: 175 IGAVGLMGIAGAK 187
>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|6ADH|B Chain B, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|2OHX|A Chain A, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OHX|B Chain B, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OXI|A Chain A, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|2OXI|B Chain B, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|1HLD|A Chain A, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1HLD|B Chain B, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1ADB|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADB|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|3BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|1LDY|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDE|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1HET|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HET|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HEU|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HEU|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1MG0|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1N92|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1N92|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1P1R|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1YE3|A Chain A, Horse Liver Alcohol Dehydrogenase Apoenzyme
pdb|2JHF|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHF|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|1ADF|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|1ADG|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|5ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|7ADH|A Chain A, Three-Dimensional Structure Of Isonicotinimidylated Liver
Alcohol Dehydrogenase
pdb|8ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|4DWV|A Chain A, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DWV|B Chain B, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DXH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
pdb|4DXH|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
Length = 374
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 96/278 (34%), Gaps = 54/278 (19%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
VEV + +V IK+VA + D + G +PLP I G++ AG+VE +G V
Sbjct: 26 VEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV---TPLPVIAGHEAAGIVESIGEGVTT 82
Query: 82 FKVGDEVYGDINEKA-----LDHPKRN--------------------------------- 103
+ GD+V + HP+ N
Sbjct: 83 VRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLG 142
Query: 104 -GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGG 162
+ ++YT V+E +A + + T Y + A S + G GG
Sbjct: 143 TSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGG 202
Query: 163 VGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAI---DYTKENIEDLPEK----F 215
VG VI K + +GA + DY K E L E
Sbjct: 203 VGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGV 262
Query: 216 DVVFDAVGQCD---KALKAVKEGGRVVSIIGSVTPPAS 250
D F+ +G+ D AL +E V I+G PP S
Sbjct: 263 DFSFEVIGRLDTMVTALSCCQEAYGVSVIVG--VPPDS 298
>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
pdb|3OQ6|B Chain B, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
Length = 374
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 96/278 (34%), Gaps = 54/278 (19%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
VEV + +V IK+VA + D + G +PLP I G++ AG+VE +G V
Sbjct: 26 VEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV---TPLPVIAGHEAAGIVESIGEGVTT 82
Query: 82 FKVGDEVYGDINEKA-----LDHPKRN--------------------------------- 103
+ GD+V + HP+ N
Sbjct: 83 VRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLG 142
Query: 104 -GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGG 162
+ ++YT V+E +A + + T Y + A S + G GG
Sbjct: 143 TSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGG 202
Query: 163 VGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAI---DYTKENIEDLPEK----F 215
VG VI K + +GA + DY K E L E
Sbjct: 203 VGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGV 262
Query: 216 DVVFDAVGQCD---KALKAVKEGGRVVSIIGSVTPPAS 250
D F+ +G+ D AL +E V I+G PP S
Sbjct: 263 DFSFEVIGRLDTMVTALSCCQEAYGVSVIVG--VPPDS 298
>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa
Length = 336
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 102/231 (44%), Gaps = 30/231 (12%)
Query: 29 EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVA---GVVEKVGSQVKKFKVG 85
E Q+L+K +L+P M G + S +P + +V GV + + S+ F+ G
Sbjct: 38 EGQILVKNEYLSLDPA----MRGWMNDARSYIPPVGIGEVMRALGVGKVLVSKHPGFQAG 93
Query: 86 DEVYG--DINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL 143
D V G + + + PK + V+ + L P+ LS +L + TAY L
Sbjct: 94 DYVNGALGVQDYFIGEPK------GFYKVDPSRAPL-PRYLS-----ALGMTGMTAYFAL 141
Query: 144 -ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAID 202
+ G+++++ G AG VG++ Q+A+ L+ LG D AID
Sbjct: 142 LDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAID 201
Query: 203 YTKENI-----EDLPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT 246
Y E++ + P+ DV FD VG D L + R+V + G+++
Sbjct: 202 YKNEDLAAGLKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIV-LCGAIS 251
>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
pdb|1AXE|B Chain B, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
Length = 374
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 97/280 (34%), Gaps = 58/280 (20%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
VEV + +V IK+VA + D + G +PLP I G++ AG+VE +G V
Sbjct: 26 VEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV---TPLPVIAGHEAAGIVESIGEGVTT 82
Query: 82 FKVGDEV-------YGDINEKALDHPKRN------------------------------- 103
+ GD+V G + HP+ N
Sbjct: 83 VRPGDKVIPLWTPQCGKC--RVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHF 140
Query: 104 ---GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGA 160
+ ++YT V+E +A + + T Y + A S + G
Sbjct: 141 LGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL 200
Query: 161 GGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAI---DYTKENIEDLPEK--- 214
GGVG VI K + +GA + DY K E L E
Sbjct: 201 GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNG 260
Query: 215 -FDVVFDAVGQCD---KALKAVKEGGRVVSIIGSVTPPAS 250
D F+ +G+ D AL +E V I+G PP S
Sbjct: 261 GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVG--VPPDS 298
>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A71|B Chain B, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A72|A Chain A, An Active-Site Double Mutant (Phe93->trp, Val203->ala)
Of Horse Liver Alcohol Dehydrogenase In Complex With
The Isosteric Nad Analog Cpad
Length = 374
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
VEV + +V IK+VA + D + G +PLP I G++ AG+VE +G V
Sbjct: 26 VEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV---TPLPVIAGHEAAGIVESIGEGVTT 82
Query: 82 FKVGDEV 88
+ GD+V
Sbjct: 83 VRPGDKV 89
>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|B Chain B, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|C Chain C, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|D Chain D, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
Length = 374
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
VEV + +V IK+VA + D + G +PLP I G++ AG+VE +G V
Sbjct: 26 VEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV---TPLPVIAGHEAAGIVESIGEGVTT 82
Query: 82 FKVGDEV 88
+ GD+V
Sbjct: 83 VRPGDKV 89
>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
pdb|1MGO|B Chain B, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
Length = 374
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
VEV + +V IK+VA + D + G +PLP I G++ AG+VE +G V
Sbjct: 26 VEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV---TPLPVIAGHEAAGIVESIGEGVTT 82
Query: 82 FKVGDEV 88
+ GD+V
Sbjct: 83 VRPGDKV 89
>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
pdb|1N8K|B Chain B, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
Length = 374
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
VEV + +V IK+VA + D + G +PLP I G++ AG+VE +G V
Sbjct: 26 VEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV---TPLPVIAGHEAAGIVESIGEGVTT 82
Query: 82 FKVGDEV 88
+ GD+V
Sbjct: 83 VRPGDKV 89
>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
pdb|1JU9|B Chain B, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
Length = 374
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
VEV + +V IK+VA + D + G +PLP I G++ AG+VE +G V
Sbjct: 26 VEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV---TPLPVIAGHEAAGIVESIGEGVTT 82
Query: 82 FKVGDEV 88
+ GD+V
Sbjct: 83 VRPGDKV 89
>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
pdb|2FZW|B Chain B, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
Length = 373
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
KA V E G S+ +EV + +V IK++A A+ D + GA +
Sbjct: 7 CKAAVAWEAGKPLSI----EEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCF 60
Query: 61 PTIPGYDVAGVVEKVGSQVKKFKVGDEV 88
P I G+ AG+VE VG V K K GD V
Sbjct: 61 PVILGHLGAGIVESVGEGVTKLKAGDTV 88
>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
Length = 352
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 58/133 (43%), Gaps = 24/133 (18%)
Query: 63 IPGYDVAGVVEKVGSQVKKFKVGDEV--------YGDINEKALDHPKRNGSLA--EYTAV 112
I G++ G V +VGS+VK FK GD V + + H G LA +++ V
Sbjct: 56 ILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNV 115
Query: 113 EENL-------------LALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG 159
++ + LA PK + A +P T + G E + G S++V+ G
Sbjct: 116 KDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIQMGSSVVVI-G 174
Query: 160 AGGVGTMVIQLAK 172
G VG M I AK
Sbjct: 175 IGAVGLMGIAGAK 187
>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From
Acinetobacter Calcoaceticus
Length = 371
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 30 DQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV 88
D+VL+KVVA + D + PLP + G++ +G++E +G V + +VGD V
Sbjct: 32 DEVLVKVVATGMCHTDLIVRDQKYPV---PLPAVLGHEGSGIIEAIGPNVTELQVGDHV 87
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 121 PKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGGAGGVGTMVIQLA 171
P + EAAS+P+ TAY L R G+S+L+ G+GGVG I +A
Sbjct: 1637 PSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIA 1688
>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And 15-Keto-Pge2
pdb|2ZB7|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph And Nicotinamide
pdb|2ZB8|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And Indomethacin
Length = 357
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 144 ERSAFSAG--KSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRS-LGADLA 200
E+ +AG K+++V G AG G++ Q+ + LL S LG D A
Sbjct: 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAA 211
Query: 201 IDYTKENI-----EDLPEKFDVVFDAVGQ--CDKALKAVKEGGRVV 239
I+Y K+N+ E P DV FD VG D + + E ++
Sbjct: 212 INYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHII 257
>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
18beta-Glycyrrhetinic Acid
pdb|2VNA|A Chain A, Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (
Zadh1)
pdb|2W98|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
pdb|2W98|B Chain B, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
Length = 357
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 144 ERSAFSAG--KSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRS-LGADLA 200
E+ +AG K+++V G AG G++ Q+ + LL S LG D A
Sbjct: 147 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAA 206
Query: 201 IDYTKENI-----EDLPEKFDVVFDAVGQ--CDKALKAVKEGGRVV 239
I+Y K+N+ E P DV FD VG D + + E ++
Sbjct: 207 INYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHII 252
>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQD|B Chain B, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQX|A Chain A, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
pdb|1YQX|B Chain B, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
Length = 366
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 29 EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV 88
E+ V KV+ + D + + + PL +PG+++ G V +VGS+VKK VGD+V
Sbjct: 41 EEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPL--VPGHEIVGEVTEVGSKVKKVNVGDKV 98
>pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh
pdb|1O8C|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|B Chain B, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|C Chain C, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|D Chain D, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
Length = 345
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 71/175 (40%), Gaps = 11/175 (6%)
Query: 27 LREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGD 86
L E V + V ++LN D + G + P IPG D AG V S+ +F G
Sbjct: 46 LPEGDVTVDVHWSSLNYKDALAITGKGKIIRN-FPMIPGIDFAGTVRT--SEDPRFHAGQ 102
Query: 87 EVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY---EGL 143
EV +H G LAE V+ + L P+ L +A + A TA L
Sbjct: 103 EVLLTGWGVGENH---WGGLAEQARVKGDWLVAMPQGLDARKAMIIGTAGFTAMLCVMAL 159
Query: 144 ERSAFS-AGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGA 197
E + I+V G +GGVG+ + L H G + L+SLGA
Sbjct: 160 EDAGVRPQDGEIVVTGASGGVGSTAVALL-HKLGYQVVAVSGRESTHEYLKSLGA 213
>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|B Chain B, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|C Chain C, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|D Chain D, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
Length = 404
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 69/181 (38%), Gaps = 35/181 (19%)
Query: 60 LPTIPGYDVAGVVEKVGSQV------KKFKVGDEVY-------GDINEKALDHPKR---- 102
P G++ +GVV + G + K+F++G+ V G A P
Sbjct: 91 FPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEXLWCGHCRPCAEGFPNHCENL 150
Query: 103 -------NGSLAEYTAVEENLLALKPKNLSFVE-------AASLPLATETAYEGL--ERS 146
+G+ AEY V+ A + L V A SL T AY +
Sbjct: 151 NELGFNVDGAFAEYVKVDAKY-AWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGG 209
Query: 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKE 206
G ++++LGG G +G + + KH +L + LGAD ID TKE
Sbjct: 210 GIRPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKE 268
Query: 207 N 207
N
Sbjct: 269 N 269
>pdb|3NX4|A Chain A, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
pdb|3NX4|B Chain B, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
Length = 324
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 57/143 (39%), Gaps = 10/143 (6%)
Query: 60 LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLAL 119
P IPG D AG V S+ +F G EV +H G LAE V+ + L
Sbjct: 57 FPXIPGIDFAGTVH--ASEDPRFHAGQEVLLTGWGVGENH---WGGLAERARVKGDWLVA 111
Query: 120 KPKNLSFVEAASLPLATETA---YEGLERSAFS-AGKSILVLGGAGGVGTMVIQLAKHVF 175
P LS A + A TA LE + ++V G +GGVG+ + L H
Sbjct: 112 LPAGLSSRNAXIIGTAGFTAXLCVXALEDAGIRPQDGEVVVTGASGGVGSTAVALL-HKL 170
Query: 176 GXXXXXXXXXXXXLDLLRSLGAD 198
G L+SLGA+
Sbjct: 171 GYQVAAVSGRESTHGYLKSLGAN 193
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 11/71 (15%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD----SPLPTIPGYDVAGVVEKVGS 77
+EV + +V I+V+A + D +ATD + P + G++ AG+VE VG
Sbjct: 26 IEVSPPKACEVRIQVIATCVCHTDI-------NATDPKKKALFPVVLGHECAGIVESVGP 78
Query: 78 QVKKFKVGDEV 88
V FK GD+V
Sbjct: 79 GVTNFKPGDKV 89
>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1Q1N|A Chain A, Apo And Holo Structures Of An Nadp(h)-dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|A Chain A, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|B Chain B, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
Length = 360
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 63/150 (42%), Gaps = 17/150 (11%)
Query: 103 NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKS--ILVLGGA 160
G A Y V E+ + P+N+ AA L T Y L R+ GK I+ LGG
Sbjct: 132 QGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIVGLGGI 191
Query: 161 GGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVVFD 220
G +GT++ + G + +GAD I +E D EK+ FD
Sbjct: 192 GSMGTLISK----AMGAETYVISRSSRKREDAMKMGADHYIATLEEG--DWGEKYFDTFD 245
Query: 221 AVGQCDKAL---------KAVKEGGRVVSI 241
+ C +L KA+K GGR+VSI
Sbjct: 246 LIVVCASSLTDIDFNIMPKAMKVGGRIVSI 275
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol
Dehydrogenase (Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol
Dehydrogenase (Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol
Dehydrogenase (Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol
Dehydrogenase (Adh4) In Complex With Nad And Zn
Length = 381
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
VEV + +V I+++A +L D + F P I G++ AG+VE +G V
Sbjct: 28 VEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEGL--AFPVIVGHEAAGIVESIGPGVTN 85
Query: 82 FKVGDEV 88
K GD+V
Sbjct: 86 VKPGDKV 92
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXX 179
P L+ EAA+ +A TA+ L E S G+ +L+ GGVG + +AK + G
Sbjct: 8 PDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMI-GARI 66
Query: 180 XXXXXXXXXLDLLRSLGADL-----AIDYTKENIEDLPEKF--DVVFDAVG--QCDKALK 230
++L LG + ++D+ E +E L + + DVV +++ + ++
Sbjct: 67 YTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILE-LTDGYGVDVVLNSLAGEAIQRGVQ 125
Query: 231 AVKEGGRVVSI 241
+ GGR + +
Sbjct: 126 ILAPGGRFIEL 136
>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|B Chain B, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|C Chain C, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|D Chain D, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
Length = 373
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
+EV + +V IK++A + D + G S P I G++ G+VE +G V
Sbjct: 26 IEVAPPKTKEVRIKILATGICRTDDHVIKGTMV---SKFPVIVGHEATGIVESIGEGVTT 82
Query: 82 FKVGDEV 88
K GD+V
Sbjct: 83 VKPGDKV 89
>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|B Chain B, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|C Chain C, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|D Chain D, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1D1S|A Chain A, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|B Chain B, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|C Chain C, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|D Chain D, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
Length = 373
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
+EV + +V IK++A + D + G S P I G++ G+VE +G V
Sbjct: 26 IEVAPPKTKEVRIKILATGICRTDDHVIKGTMV---SKFPVIVGHEATGIVESIGEGVTT 82
Query: 82 FKVGDEV 88
K GD+V
Sbjct: 83 VKPGDKV 89
>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|B Chain B, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|C Chain C, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|D Chain D, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
Length = 380
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 85/222 (38%), Gaps = 37/222 (16%)
Query: 23 EVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKF 82
E+ + +L+++++A + D G PLP I G++ AG V +V + +
Sbjct: 36 EISDIPRGSILVEILSAGVCGSDVHMFRG--EDPRVPLPIILGHEGAGRVVEVNGEKRDL 93
Query: 83 -----KVGD----------------------------EVYGDINEKALDHPKRNGSLAEY 109
K GD +VYG IN ++P G + +
Sbjct: 94 NGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYG-INRGCSEYPHLRGCYSSH 152
Query: 110 TAVEENLLALKPKNLSFVEAASLPLAT-ETAYEGLERSAFSAGKSILVLGGAGGVGTMVI 168
++ LK ++ ++ + + TAY + S +V+ GAG +G +
Sbjct: 153 IVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGV 212
Query: 169 QLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIED 210
+A+ + L L +GADL ++ + ++E+
Sbjct: 213 VIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEE 254
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 21 NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
+V+V + +V IK++ AL D G + P I G++ AG+VE VG V
Sbjct: 25 DVQVAPPQAGEVRIKILYTALCHTDAYTWSG--KDPEGLFPCILGHEAAGIVESVGEGVT 82
Query: 81 KFKVGDEV 88
+ + GD V
Sbjct: 83 EVQAGDHV 90
>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol
Dehydrogenase-Like Protein Yahk
Length = 369
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 30 DQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV 88
+ V I++ + D ++ ++ T P +PG+++ G V VG QV+K+ GD V
Sbjct: 48 NDVKIEIAYCGVCHSDLHQVRSEWAGT--VYPCVPGHEIVGRVVAVGDQVEKYAPGDLV 104
>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
Length = 396
Score = 31.2 bits (69), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 21 NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
+V+V + +V +KV+ AL D G + P + G++ AG+VE VG V
Sbjct: 43 DVQVAPPQAGEVRVKVLYTALCHTDAYTWSG--KDPEGLFPCVLGHEAAGIVESVGEGVT 100
Query: 81 KFKVGDEV 88
+ + GD V
Sbjct: 101 EVQPGDHV 108
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex:
Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase
(Adh8) With The Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex:
Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase
(Adh8) With The Cofactor Nadp
Length = 373
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 16 LKFETNVEVPSLREDQVLIKVVAAALNPID---FKRMLGAFSATDSPLPTIPGYDVAGVV 72
L ET + V + +V IK++A+ + D K ++ S P I G++ GVV
Sbjct: 22 LSLET-ITVAPPKAHEVRIKILASGICGSDSSVLKEII------PSKFPVILGHEAVGVV 74
Query: 73 EKVGSQVKKFKVGDEV 88
E +G+ V K GD+V
Sbjct: 75 ESIGAGVTCVKPGDKV 90
>pdb|3LUP|A Chain A, Crystal Structure Of Fatty Acid Binding Degv Family
Protein Sag1342 From Streptococcus Agalactiae
Length = 285
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 65 GYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKP 121
G D +V K+ SQ++K + G V D+N H + G L+ +A+ NLL++KP
Sbjct: 141 GXDFDVIVNKIQSQIEKIE-GFIVVNDLN-----HLVKGGRLSNGSAIIGNLLSIKP 191
>pdb|1SPB|P Chain P, Subtilisin Bpn' Prosegment (77 Residues) Complexed With A
Mutant Subtilisin Bpn' (266 Residues). Crystal Ph 4.6.
Crystallization Temperature 20 C Diffraction
Temperature- 160 C
Length = 78
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 39 AALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALD 98
A N K+ + F T S + DV + EK G K+FK D +NEKA+
Sbjct: 1 AGSNGAQEKKYIVGFKQTMSTMSAAKKKDV--ISEKGGKVQKQFKYVDAASATLNEKAVK 58
Query: 99 HPKRNGSLAEYTAVEENLLA 118
K++ S+A VEE+ +A
Sbjct: 59 ELKKDPSVA---YVEEDHVA 75
>pdb|1XTZ|A Chain A, Crystal Structure Of The S. Cerevisiae
D-Ribose-5-Phosphate Isomerase: Comparison With The
Archeal And Bacterial Enzymes
Length = 264
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 207 NIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSD 257
+IE P + D+ FD + D+ L+ +K GG + V+ A +F++ +D
Sbjct: 95 SIEQYP-RIDIAFDGADEVDENLQLIKGGGACLFQEKLVSTSAKTFIVVAD 144
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined
With A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 41 LNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
LN D K+ +GAFSATDS + + G+ +K VKK
Sbjct: 7 LNAEDIKKAVGAFSATDS-FDHKKFFQMVGLKKKSADDVKK 46
>pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases, Atcad5
pdb|2CF6|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases Atcad5
Length = 357
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 32/227 (14%)
Query: 26 SLRE---DQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKF 82
+LRE + V I+++ + D + ++ P+ +PG++V G V +VGS V KF
Sbjct: 28 TLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPM--VPGHEVVGEVVEVGSDVSKF 85
Query: 83 KVGD---------------------EVYG-----DINEKALDHPKRNGSLAEYTAVEENL 116
VGD E Y N+ ++ G A+ T V +
Sbjct: 86 TVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKF 145
Query: 117 LALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG 176
+ P+ ++ +AA L A T Y L + G GGVG M +++AK +
Sbjct: 146 VVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGH 205
Query: 177 XXXXXXXXXXXXLDLLRSLGA-DLAIDYTKENIEDLPEKFDVVFDAV 222
+ L+ LGA D I + + +L + D V D V
Sbjct: 206 HVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTV 252
>pdb|3IUP|A Chain A, Crystal Structure Of Putative Nadph:quinone
Oxidoreductase (Yp_296108.1) From Ralstonia Eutropha
Jmp134 At 1.70 A Resolution
pdb|3IUP|B Chain B, Crystal Structure Of Putative Nadph:quinone
Oxidoreductase (Yp_296108.1) From Ralstonia Eutropha
Jmp134 At 1.70 A Resolution
Length = 379
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 21 NVEVPSLREDQVLIKVVAAALNPIDFKRMLGA 52
+++ P D+VLI++ A+ LNP D + GA
Sbjct: 24 SIDTPHPGPDEVLIRIEASPLNPSDLGLLFGA 55
>pdb|3IG3|A Chain A, Crystal Strucure Of Mouse Plexin A3 Intracellular Domain
Length = 627
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 91 DINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATE--TAYEGLERSAF 148
DI K KR SLA Y + +L+AL PK +S A+ T + YE L R+A
Sbjct: 303 DITTKIECDWKRVNSLAHYQVTDGSLVALVPKQVSAYNMANSFTFTRSLSRYESLLRAAS 362
Query: 149 S 149
S
Sbjct: 363 S 363
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.134 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,777,791
Number of Sequences: 62578
Number of extensions: 354420
Number of successful extensions: 1188
Number of sequences better than 100.0: 142
Number of HSP's better than 100.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 965
Number of HSP's gapped (non-prelim): 166
length of query: 310
length of database: 14,973,337
effective HSP length: 99
effective length of query: 211
effective length of database: 8,778,115
effective search space: 1852182265
effective search space used: 1852182265
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 51 (24.3 bits)