Query 021628
Match_columns 310
No_of_seqs 111 out of 1386
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 04:27:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021628.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021628hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 3.1E-54 6.7E-59 369.8 28.0 299 1-309 4-338 (339)
2 COG0604 Qor NADPH:quinone redu 100.0 2.4E-46 5.3E-51 328.4 30.9 296 1-308 1-326 (326)
3 COG1062 AdhC Zn-dependent alco 100.0 2.9E-47 6.3E-52 320.1 22.9 298 1-308 3-366 (366)
4 KOG0024 Sorbitol dehydrogenase 100.0 3.9E-46 8.4E-51 310.6 23.2 301 1-310 5-354 (354)
5 KOG0023 Alcohol dehydrogenase, 100.0 3.8E-45 8.3E-50 303.9 25.4 299 2-309 11-355 (360)
6 KOG1197 Predicted quinone oxid 100.0 1.2E-43 2.6E-48 285.2 25.8 293 2-310 10-332 (336)
7 cd08239 THR_DH_like L-threonin 100.0 9.2E-43 2E-47 310.5 30.6 299 1-308 1-339 (339)
8 cd08281 liver_ADH_like1 Zinc-d 100.0 6.8E-43 1.5E-47 314.7 29.6 300 1-306 1-371 (371)
9 KOG0022 Alcohol dehydrogenase, 100.0 3.7E-43 7.9E-48 290.8 23.3 299 1-308 8-375 (375)
10 PRK09880 L-idonate 5-dehydroge 100.0 2.7E-42 6E-47 307.7 28.9 297 1-308 5-343 (343)
11 TIGR03451 mycoS_dep_FDH mycoth 100.0 4.2E-42 9.1E-47 308.2 29.8 297 1-307 2-357 (358)
12 TIGR02818 adh_III_F_hyde S-(hy 100.0 8.3E-42 1.8E-46 307.1 30.3 299 1-308 2-368 (368)
13 PLN02740 Alcohol dehydrogenase 100.0 1.6E-41 3.6E-46 306.6 30.8 300 1-308 11-381 (381)
14 TIGR02822 adh_fam_2 zinc-bindi 100.0 6.4E-41 1.4E-45 296.9 31.8 292 3-306 1-328 (329)
15 PLN02586 probable cinnamyl alc 100.0 5.4E-41 1.2E-45 300.8 29.1 299 1-308 11-353 (360)
16 cd08300 alcohol_DH_class_III c 100.0 8.8E-41 1.9E-45 300.7 29.2 298 1-307 3-368 (368)
17 TIGR01202 bchC 2-desacetyl-2-h 100.0 1.4E-40 3E-45 292.2 27.2 289 1-307 2-308 (308)
18 TIGR02819 fdhA_non_GSH formald 100.0 3.5E-40 7.6E-45 297.9 29.3 298 1-309 3-391 (393)
19 cd08301 alcohol_DH_plants Plan 100.0 3E-40 6.5E-45 297.5 28.5 297 1-306 3-368 (369)
20 PLN02827 Alcohol dehydrogenase 100.0 2.9E-40 6.3E-45 297.8 28.4 296 1-308 13-376 (378)
21 PLN02178 cinnamyl-alcohol dehy 100.0 1.2E-39 2.6E-44 293.0 30.8 298 2-308 6-348 (375)
22 PLN02514 cinnamyl-alcohol dehy 100.0 3.3E-39 7.1E-44 289.2 30.8 298 1-309 10-351 (357)
23 PRK10309 galactitol-1-phosphat 100.0 3.1E-39 6.7E-44 288.6 30.1 297 1-308 1-346 (347)
24 cd08277 liver_alcohol_DH_like 100.0 4.4E-39 9.5E-44 289.4 30.4 296 1-306 3-364 (365)
25 cd08291 ETR_like_1 2-enoyl thi 100.0 6.7E-39 1.5E-43 283.9 30.6 291 1-306 1-323 (324)
26 TIGR03201 dearomat_had 6-hydro 100.0 5.1E-39 1.1E-43 287.3 28.2 296 4-308 2-349 (349)
27 cd08237 ribitol-5-phosphate_DH 100.0 4.3E-39 9.3E-44 286.7 27.0 292 2-309 4-340 (341)
28 cd08230 glucose_DH Glucose deh 100.0 1.1E-38 2.4E-43 285.8 28.5 296 1-308 1-355 (355)
29 cd08292 ETR_like_2 2-enoyl thi 100.0 4.7E-38 1E-42 278.4 31.1 293 1-307 1-324 (324)
30 cd08233 butanediol_DH_like (2R 100.0 3.8E-38 8.2E-43 282.1 28.9 298 1-306 1-350 (351)
31 cd08238 sorbose_phosphate_red 100.0 5.4E-38 1.2E-42 286.1 29.4 302 1-309 3-369 (410)
32 cd08296 CAD_like Cinnamyl alco 100.0 2.2E-37 4.7E-42 275.2 31.3 296 1-307 1-333 (333)
33 KOG0025 Zn2+-binding dehydroge 100.0 2.8E-37 6.1E-42 252.8 25.7 295 2-309 21-353 (354)
34 cd08285 NADP_ADH NADP(H)-depen 100.0 4.8E-37 1E-41 274.9 29.2 299 1-308 1-351 (351)
35 cd08231 MDR_TM0436_like Hypoth 100.0 9.5E-37 2.1E-41 274.1 30.6 298 2-308 2-361 (361)
36 cd08293 PTGR2 Prostaglandin re 100.0 1.1E-36 2.4E-41 272.0 29.6 280 14-308 21-345 (345)
37 cd08295 double_bond_reductase_ 100.0 1.9E-36 4E-41 269.8 30.5 289 1-308 8-338 (338)
38 PRK10754 quinone oxidoreductas 100.0 2.7E-36 5.8E-41 267.6 31.3 295 1-308 2-327 (327)
39 cd05284 arabinose_DH_like D-ar 100.0 2.7E-36 5.8E-41 269.0 31.0 298 1-308 1-340 (340)
40 COG1063 Tdh Threonine dehydrog 100.0 1.5E-36 3.2E-41 269.9 29.1 298 1-308 1-350 (350)
41 cd08294 leukotriene_B4_DH_like 100.0 3.3E-36 7.2E-41 267.1 31.1 284 1-308 3-329 (329)
42 PLN03154 putative allyl alcoho 100.0 6.4E-36 1.4E-40 266.8 33.0 289 2-309 10-346 (348)
43 PRK10083 putative oxidoreducta 100.0 2.4E-36 5.2E-41 269.2 29.2 300 1-309 1-338 (339)
44 cd08274 MDR9 Medium chain dehy 100.0 8.1E-36 1.8E-40 266.9 32.2 303 1-308 1-350 (350)
45 cd08244 MDR_enoyl_red Possible 100.0 4.4E-35 9.6E-40 259.2 32.9 296 1-308 1-324 (324)
46 cd08283 FDH_like_1 Glutathione 100.0 1.6E-35 3.5E-40 268.0 30.4 299 1-308 1-386 (386)
47 cd08290 ETR 2-enoyl thioester 100.0 2E-35 4.3E-40 263.5 30.5 296 1-308 1-341 (341)
48 cd08299 alcohol_DH_class_I_II_ 100.0 1.4E-35 3E-40 267.1 29.1 298 1-308 8-373 (373)
49 TIGR02825 B4_12hDH leukotriene 100.0 3.3E-35 7.2E-40 260.3 30.9 281 2-307 2-325 (325)
50 cd08297 CAD3 Cinnamyl alcohol 100.0 4.4E-35 9.6E-40 261.3 31.7 300 1-308 1-341 (341)
51 TIGR02817 adh_fam_1 zinc-bindi 100.0 3.1E-35 6.8E-40 261.6 30.6 295 2-307 1-334 (336)
52 cd08262 Zn_ADH8 Alcohol dehydr 100.0 2.2E-35 4.7E-40 263.2 29.5 298 1-307 1-341 (341)
53 cd08250 Mgc45594_like Mgc45594 100.0 6.3E-35 1.4E-39 259.0 32.3 291 1-307 2-329 (329)
54 cd08286 FDH_like_ADH2 formalde 100.0 1.9E-35 4E-40 264.1 28.9 299 1-308 1-345 (345)
55 cd08263 Zn_ADH10 Alcohol dehyd 100.0 3E-35 6.6E-40 264.8 30.1 298 1-307 1-367 (367)
56 cd08256 Zn_ADH2 Alcohol dehydr 100.0 1.4E-35 3.1E-40 265.4 27.2 298 1-306 1-350 (350)
57 cd08270 MDR4 Medium chain dehy 100.0 1.3E-34 2.8E-39 254.2 32.5 284 1-308 1-305 (305)
58 cd08240 6_hydroxyhexanoate_dh_ 100.0 5.2E-35 1.1E-39 261.7 29.9 300 1-308 1-350 (350)
59 cd08246 crotonyl_coA_red croto 100.0 8.1E-35 1.8E-39 264.3 30.9 302 1-306 13-391 (393)
60 PRK09422 ethanol-active dehydr 100.0 9.9E-35 2.2E-39 258.7 30.9 297 1-308 1-336 (338)
61 TIGR01751 crot-CoA-red crotony 100.0 1E-34 2.2E-39 263.9 31.4 305 1-309 8-388 (398)
62 cd08278 benzyl_alcohol_DH Benz 100.0 4.6E-35 9.9E-40 263.3 28.7 296 1-307 3-365 (365)
63 cd05283 CAD1 Cinnamyl alcohol 100.0 1.1E-34 2.3E-39 258.4 30.3 295 2-307 1-337 (337)
64 cd05278 FDH_like Formaldehyde 100.0 4.5E-35 9.9E-40 261.7 28.1 299 1-308 1-347 (347)
65 PRK13771 putative alcohol dehy 100.0 6.7E-35 1.4E-39 259.4 28.9 297 1-308 1-333 (334)
66 PTZ00354 alcohol dehydrogenase 100.0 2.8E-34 6E-39 255.1 32.2 294 1-309 2-329 (334)
67 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 2.6E-34 5.7E-39 255.8 32.0 299 1-308 1-338 (338)
68 cd08260 Zn_ADH6 Alcohol dehydr 100.0 1.1E-34 2.5E-39 259.0 29.5 299 1-307 1-344 (345)
69 cd05279 Zn_ADH1 Liver alcohol 100.0 1.2E-34 2.6E-39 260.6 28.2 295 2-306 2-364 (365)
70 cd08242 MDR_like Medium chain 100.0 1.2E-34 2.7E-39 256.1 27.6 288 1-308 1-319 (319)
71 cd08279 Zn_ADH_class_III Class 100.0 1.2E-34 2.6E-39 260.5 27.4 295 1-304 1-361 (363)
72 cd08259 Zn_ADH5 Alcohol dehydr 100.0 3.9E-34 8.5E-39 254.0 30.0 296 1-307 1-332 (332)
73 cd08235 iditol_2_DH_like L-idi 100.0 2.8E-34 6.1E-39 256.2 29.1 296 1-307 1-343 (343)
74 cd08298 CAD2 Cinnamyl alcohol 100.0 6.7E-34 1.4E-38 252.4 31.2 294 1-306 1-329 (329)
75 cd08248 RTN4I1 Human Reticulon 100.0 4.6E-34 1E-38 255.5 29.9 296 1-307 1-350 (350)
76 cd08284 FDH_like_2 Glutathione 100.0 4.3E-34 9.4E-39 255.1 29.1 295 1-307 1-343 (344)
77 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 7.2E-34 1.6E-38 251.6 30.3 296 1-308 1-325 (325)
78 cd08249 enoyl_reductase_like e 100.0 3.2E-34 6.8E-39 255.5 27.7 297 1-308 1-339 (339)
79 cd08282 PFDH_like Pseudomonas 100.0 4.1E-34 9E-39 258.0 28.6 296 1-308 1-375 (375)
80 cd08261 Zn_ADH7 Alcohol dehydr 100.0 8.8E-34 1.9E-38 252.5 29.9 297 1-308 1-337 (337)
81 cd08276 MDR7 Medium chain dehy 100.0 3.4E-33 7.4E-38 248.3 32.5 300 1-307 1-335 (336)
82 cd08234 threonine_DH_like L-th 100.0 1.8E-33 3.9E-38 250.1 30.0 294 1-306 1-333 (334)
83 cd08243 quinone_oxidoreductase 100.0 2.5E-33 5.4E-38 247.4 30.5 293 1-306 1-319 (320)
84 TIGR02823 oxido_YhdH putative 100.0 2.6E-33 5.5E-38 248.0 30.6 294 2-307 1-322 (323)
85 cd08287 FDH_like_ADH3 formalde 100.0 9.7E-34 2.1E-38 253.0 27.6 296 1-307 1-344 (345)
86 cd08252 AL_MDR Arginate lyase 100.0 5.4E-33 1.2E-37 247.2 31.8 295 1-307 1-336 (336)
87 cd08272 MDR6 Medium chain dehy 100.0 1.2E-32 2.5E-37 243.5 32.1 297 1-308 1-326 (326)
88 cd08289 MDR_yhfp_like Yhfp put 100.0 3E-33 6.4E-38 247.9 28.2 298 1-308 1-326 (326)
89 cd08266 Zn_ADH_like1 Alcohol d 100.0 1.3E-32 2.8E-37 244.8 32.3 302 1-308 1-342 (342)
90 cd08236 sugar_DH NAD(P)-depend 100.0 4.2E-33 9.1E-38 248.7 28.9 295 1-306 1-343 (343)
91 KOG1198 Zinc-binding oxidoredu 100.0 3.3E-33 7.2E-38 245.5 27.6 283 14-309 18-346 (347)
92 PRK05396 tdh L-threonine 3-deh 100.0 3.7E-33 8E-38 248.9 28.4 299 1-309 1-341 (341)
93 cd05289 MDR_like_2 alcohol deh 100.0 1.8E-32 4E-37 240.4 32.3 294 1-306 1-309 (309)
94 cd08264 Zn_ADH_like2 Alcohol d 100.0 5E-33 1.1E-37 246.4 28.7 289 1-304 1-324 (325)
95 cd05282 ETR_like 2-enoyl thioe 100.0 7.3E-33 1.6E-37 245.0 29.3 287 6-307 3-323 (323)
96 cd08232 idonate-5-DH L-idonate 100.0 5E-33 1.1E-37 247.9 28.3 296 5-308 2-339 (339)
97 cd08288 MDR_yhdh Yhdh putative 100.0 2.7E-32 5.8E-37 241.6 31.9 296 1-308 1-324 (324)
98 cd08273 MDR8 Medium chain dehy 100.0 1.7E-32 3.8E-37 243.4 30.6 288 2-306 2-330 (331)
99 cd05281 TDH Threonine dehydrog 100.0 9.2E-33 2E-37 246.3 28.5 299 1-308 1-341 (341)
100 cd05276 p53_inducible_oxidored 100.0 2.5E-32 5.3E-37 240.8 30.4 291 1-306 1-323 (323)
101 cd05285 sorbitol_DH Sorbitol d 100.0 1.1E-32 2.3E-37 246.1 28.0 296 3-306 1-341 (343)
102 cd08247 AST1_like AST1 is a cy 100.0 5.5E-32 1.2E-36 242.4 31.2 297 1-307 1-351 (352)
103 cd08253 zeta_crystallin Zeta-c 100.0 5.1E-32 1.1E-36 239.1 30.3 298 1-308 1-325 (325)
104 cd08245 CAD Cinnamyl alcohol d 100.0 7.5E-32 1.6E-36 239.4 29.7 294 2-306 1-330 (330)
105 cd05286 QOR2 Quinone oxidoredu 100.0 1.8E-31 3.8E-36 235.0 31.8 290 2-308 1-320 (320)
106 cd08271 MDR5 Medium chain dehy 100.0 2.9E-31 6.2E-36 234.7 32.5 294 1-308 1-325 (325)
107 cd08265 Zn_ADH3 Alcohol dehydr 100.0 7E-32 1.5E-36 244.2 29.0 286 16-306 39-383 (384)
108 PLN02702 L-idonate 5-dehydroge 100.0 1.7E-31 3.6E-36 240.3 30.9 298 2-307 19-363 (364)
109 cd08269 Zn_ADH9 Alcohol dehydr 100.0 9.3E-32 2E-36 236.8 26.3 277 15-306 6-311 (312)
110 TIGR02824 quinone_pig3 putativ 100.0 1.1E-30 2.5E-35 230.6 31.3 292 1-307 1-324 (325)
111 cd05288 PGDH Prostaglandin deh 100.0 8.9E-31 1.9E-35 232.3 29.8 287 2-306 3-329 (329)
112 cd08267 MDR1 Medium chain dehy 100.0 1.1E-30 2.3E-35 230.5 30.0 290 5-306 2-319 (319)
113 TIGR00692 tdh L-threonine 3-de 100.0 3.9E-31 8.4E-36 235.8 27.4 293 7-308 5-340 (340)
114 cd08268 MDR2 Medium chain dehy 100.0 1.8E-30 3.8E-35 229.7 30.5 297 1-307 1-327 (328)
115 COG2130 Putative NADP-dependen 100.0 4.2E-31 9E-36 218.7 23.0 276 14-309 25-339 (340)
116 cd08251 polyketide_synthase po 100.0 1.1E-30 2.5E-35 228.5 27.0 272 24-306 2-303 (303)
117 cd08275 MDR3 Medium chain dehy 100.0 1.4E-29 3.1E-34 225.0 31.3 291 2-308 1-337 (337)
118 cd08241 QOR1 Quinone oxidoredu 100.0 3.2E-29 7E-34 221.0 31.8 291 1-307 1-323 (323)
119 cd08258 Zn_ADH4 Alcohol dehydr 100.0 4.3E-29 9.4E-34 219.3 27.5 236 1-245 1-267 (306)
120 TIGR03366 HpnZ_proposed putati 100.0 3.1E-29 6.7E-34 217.4 19.2 224 63-288 1-280 (280)
121 cd05195 enoyl_red enoyl reduct 100.0 5.7E-28 1.2E-32 209.7 25.2 260 30-306 1-293 (293)
122 smart00829 PKS_ER Enoylreducta 100.0 1.3E-27 2.9E-32 207.2 24.6 255 34-306 2-288 (288)
123 cd05188 MDR Medium chain reduc 100.0 3.3E-26 7.2E-31 197.0 24.8 212 31-245 1-235 (271)
124 cd08255 2-desacetyl-2-hydroxye 99.9 9.3E-26 2E-30 195.4 22.9 229 58-305 18-276 (277)
125 KOG1202 Animal-type fatty acid 99.9 5E-26 1.1E-30 214.4 17.4 277 10-310 1424-1743(2376)
126 KOG1196 Predicted NAD-dependen 99.9 4.6E-23 1E-27 170.5 26.0 267 25-309 33-341 (343)
127 PF08240 ADH_N: Alcohol dehydr 99.7 1.8E-17 3.9E-22 122.8 9.8 91 29-120 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.3 2E-11 4.4E-16 93.2 10.5 83 162-245 1-92 (130)
129 PF13602 ADH_zinc_N_2: Zinc-bi 99.2 3.8E-11 8.2E-16 91.3 4.9 108 195-306 1-127 (127)
130 cd00401 AdoHcyase S-adenosyl-L 99.1 8.9E-10 1.9E-14 99.1 13.5 162 139-308 188-376 (413)
131 PRK09424 pntA NAD(P) transhydr 99.0 3.5E-09 7.6E-14 97.6 11.5 131 148-280 162-339 (509)
132 PRK11873 arsM arsenite S-adeno 98.3 1.6E-05 3.4E-10 68.7 13.9 158 145-305 72-258 (272)
133 TIGR00561 pntA NAD(P) transhyd 98.3 4.6E-06 1E-10 77.1 10.3 94 149-244 162-286 (511)
134 PRK05476 S-adenosyl-L-homocyst 98.2 1.5E-05 3.3E-10 72.2 10.2 100 138-245 197-302 (425)
135 PRK08306 dipicolinate synthase 98.1 3.9E-05 8.5E-10 66.9 11.4 91 150-245 151-244 (296)
136 TIGR00936 ahcY adenosylhomocys 98.0 6.3E-05 1.4E-09 67.9 10.5 89 148-244 192-284 (406)
137 PRK00517 prmA ribosomal protei 97.9 0.00039 8.4E-09 59.2 13.9 157 81-275 66-233 (250)
138 PLN02494 adenosylhomocysteinas 97.8 7.9E-05 1.7E-09 68.0 8.3 88 149-244 252-343 (477)
139 COG2518 Pcm Protein-L-isoaspar 97.7 0.0008 1.7E-08 54.7 11.8 101 139-243 61-170 (209)
140 cd05213 NAD_bind_Glutamyl_tRNA 97.7 0.00011 2.5E-09 64.6 7.0 104 115-224 139-248 (311)
141 TIGR00518 alaDH alanine dehydr 97.6 0.00031 6.6E-09 63.3 9.3 93 150-244 166-269 (370)
142 PF11017 DUF2855: Protein of u 97.6 0.0096 2.1E-07 51.7 17.3 233 59-300 29-312 (314)
143 PTZ00075 Adenosylhomocysteinas 97.5 0.00099 2.1E-08 61.1 10.3 90 147-244 250-343 (476)
144 PF01488 Shikimate_DH: Shikima 97.4 0.00031 6.8E-09 53.8 5.4 91 149-243 10-110 (135)
145 PRK12771 putative glutamate sy 97.4 0.00029 6.3E-09 67.3 5.9 76 147-224 133-232 (564)
146 TIGR02853 spore_dpaA dipicolin 97.4 0.0011 2.3E-08 57.6 8.7 91 150-245 150-243 (287)
147 PRK00045 hemA glutamyl-tRNA re 97.3 0.0004 8.6E-09 63.8 6.2 149 62-224 90-252 (423)
148 PF02826 2-Hacid_dh_C: D-isome 97.3 0.0013 2.7E-08 53.0 7.8 108 148-275 33-148 (178)
149 PF02353 CMAS: Mycolic acid cy 97.3 0.0025 5.4E-08 54.8 9.9 96 143-241 55-165 (273)
150 PRK08324 short chain dehydroge 97.2 0.0014 3E-08 64.1 8.7 109 104-223 385-507 (681)
151 COG4221 Short-chain alcohol de 97.2 0.0013 2.9E-08 54.5 6.9 73 150-223 5-90 (246)
152 COG3967 DltE Short-chain dehyd 97.1 0.0012 2.7E-08 53.1 6.0 73 150-223 4-87 (245)
153 PRK14967 putative methyltransf 97.1 0.028 6E-07 46.9 14.4 130 143-289 29-193 (223)
154 PRK00377 cbiT cobalt-precorrin 97.1 0.016 3.5E-07 47.4 12.6 115 144-273 34-163 (198)
155 COG0300 DltE Short-chain dehyd 97.0 0.0034 7.3E-08 53.4 7.7 75 148-223 3-93 (265)
156 TIGR00406 prmA ribosomal prote 97.0 0.018 4E-07 50.1 12.5 108 148-271 157-275 (288)
157 COG2242 CobL Precorrin-6B meth 97.0 0.015 3.2E-07 46.4 10.6 115 144-273 28-153 (187)
158 COG0686 Ald Alanine dehydrogen 96.9 0.0028 6E-08 54.3 6.8 93 148-243 166-269 (371)
159 PF01135 PCMT: Protein-L-isoas 96.9 0.011 2.5E-07 48.6 10.2 100 141-243 63-173 (209)
160 PF12847 Methyltransf_18: Meth 96.9 0.01 2.3E-07 43.4 9.1 90 150-241 1-110 (112)
161 PRK05786 fabG 3-ketoacyl-(acyl 96.9 0.0088 1.9E-07 50.2 9.8 42 150-192 4-45 (238)
162 PRK13943 protein-L-isoaspartat 96.8 0.022 4.9E-07 50.2 11.6 97 142-241 72-179 (322)
163 PF00670 AdoHcyase_NAD: S-aden 96.7 0.015 3.2E-07 45.5 8.8 90 147-244 19-112 (162)
164 TIGR02469 CbiT precorrin-6Y C5 96.7 0.046 9.9E-07 40.6 11.5 97 144-242 13-122 (124)
165 TIGR01035 hemA glutamyl-tRNA r 96.7 0.014 3E-07 53.6 9.7 148 62-224 88-250 (417)
166 PRK13942 protein-L-isoaspartat 96.6 0.069 1.5E-06 44.2 12.9 98 142-242 68-176 (212)
167 PRK11705 cyclopropane fatty ac 96.6 0.012 2.7E-07 53.2 9.0 96 144-242 161-267 (383)
168 PRK12742 oxidoreductase; Provi 96.6 0.019 4.2E-07 48.0 9.4 73 150-223 5-84 (237)
169 COG2226 UbiE Methylase involve 96.5 0.034 7.5E-07 46.6 10.0 99 144-244 45-158 (238)
170 PRK07574 formate dehydrogenase 96.4 0.03 6.4E-07 50.6 9.8 86 150-242 191-284 (385)
171 COG2230 Cfa Cyclopropane fatty 96.4 0.078 1.7E-06 45.5 11.7 98 144-244 66-178 (283)
172 PRK05872 short chain dehydroge 96.3 0.014 3.1E-07 50.9 7.5 73 150-223 8-94 (296)
173 PLN03209 translocon at the inn 96.3 0.0082 1.8E-07 56.6 6.1 79 144-223 73-168 (576)
174 PF13460 NAD_binding_10: NADH( 96.3 0.011 2.4E-07 47.4 6.2 88 154-245 1-100 (183)
175 cd01078 NAD_bind_H4MPT_DH NADP 96.3 0.018 3.9E-07 47.0 7.1 73 150-223 27-106 (194)
176 PRK08317 hypothetical protein; 96.3 0.07 1.5E-06 44.6 11.0 98 143-242 12-124 (241)
177 PLN03139 formate dehydrogenase 96.3 0.033 7.2E-07 50.3 9.3 106 150-274 198-311 (386)
178 PRK00258 aroE shikimate 5-dehy 96.2 0.021 4.5E-07 49.4 7.6 91 149-242 121-221 (278)
179 PRK07060 short chain dehydroge 96.2 0.026 5.7E-07 47.5 8.0 73 150-223 8-86 (245)
180 PRK06139 short chain dehydroge 96.2 0.024 5.3E-07 50.3 8.0 73 150-223 6-93 (330)
181 PRK03369 murD UDP-N-acetylmura 96.1 0.02 4.3E-07 53.8 7.7 71 148-223 9-79 (488)
182 PRK05693 short chain dehydroge 96.1 0.025 5.3E-07 48.7 7.7 71 152-223 2-81 (274)
183 PRK13944 protein-L-isoaspartat 96.1 0.12 2.6E-06 42.5 11.5 98 143-242 65-173 (205)
184 PRK06182 short chain dehydroge 96.1 0.03 6.5E-07 48.1 8.2 73 150-223 2-83 (273)
185 PRK05993 short chain dehydroge 96.1 0.034 7.4E-07 48.0 8.5 73 150-223 3-85 (277)
186 PRK06057 short chain dehydroge 96.1 0.031 6.8E-07 47.5 8.0 73 150-223 6-88 (255)
187 TIGR00080 pimt protein-L-isoas 96.0 0.21 4.6E-06 41.4 12.6 98 142-242 69-177 (215)
188 PRK10258 biotin biosynthesis p 96.0 0.11 2.3E-06 44.3 11.1 92 147-242 39-140 (251)
189 PRK06949 short chain dehydroge 96.0 0.023 5E-07 48.2 6.9 43 149-192 7-49 (258)
190 PRK07825 short chain dehydroge 96.0 0.037 8E-07 47.5 8.2 72 151-223 5-87 (273)
191 PRK00107 gidB 16S rRNA methylt 95.9 0.11 2.4E-06 42.1 10.2 93 147-242 42-145 (187)
192 PRK04148 hypothetical protein; 95.9 0.054 1.2E-06 41.1 7.6 73 148-223 14-86 (134)
193 PRK06196 oxidoreductase; Provi 95.9 0.04 8.7E-07 48.5 8.2 73 150-223 25-108 (315)
194 PRK06200 2,3-dihydroxy-2,3-dih 95.8 0.049 1.1E-06 46.5 8.3 43 150-193 5-47 (263)
195 COG2910 Putative NADH-flavin r 95.8 0.013 2.8E-07 46.5 4.2 89 153-245 2-107 (211)
196 PRK12367 short chain dehydroge 95.8 0.03 6.4E-07 47.5 6.8 71 151-223 14-88 (245)
197 PRK08287 cobalt-precorrin-6Y C 95.8 0.34 7.3E-06 39.1 12.8 113 144-273 25-149 (187)
198 PF08241 Methyltransf_11: Meth 95.8 0.052 1.1E-06 38.0 7.0 78 162-240 6-95 (95)
199 cd01065 NAD_bind_Shikimate_DH 95.8 0.054 1.2E-06 42.2 7.6 92 149-242 17-116 (155)
200 COG1052 LdhA Lactate dehydroge 95.7 0.055 1.2E-06 47.8 8.2 104 150-274 145-256 (324)
201 PRK08177 short chain dehydroge 95.7 0.049 1.1E-06 45.3 7.6 71 152-223 2-80 (225)
202 PRK12550 shikimate 5-dehydroge 95.7 0.078 1.7E-06 45.6 8.9 73 142-223 113-187 (272)
203 TIGR01809 Shik-DH-AROM shikima 95.7 0.037 7.9E-07 48.0 6.9 72 150-223 124-199 (282)
204 PLN02928 oxidoreductase family 95.7 0.062 1.3E-06 48.1 8.4 91 150-243 158-263 (347)
205 COG0169 AroE Shikimate 5-dehyd 95.7 0.046 9.9E-07 47.2 7.2 90 148-242 123-226 (283)
206 PRK05866 short chain dehydroge 95.6 0.065 1.4E-06 46.7 8.4 42 150-192 39-80 (293)
207 PRK07814 short chain dehydroge 95.6 0.052 1.1E-06 46.4 7.7 42 150-192 9-50 (263)
208 CHL00194 ycf39 Ycf39; Provisio 95.6 0.031 6.8E-07 49.3 6.4 70 153-223 2-73 (317)
209 PRK13243 glyoxylate reductase; 95.6 0.083 1.8E-06 47.0 9.0 104 150-274 149-260 (333)
210 PRK12549 shikimate 5-dehydroge 95.6 0.044 9.5E-07 47.6 7.0 71 149-223 125-201 (284)
211 PRK12829 short chain dehydroge 95.6 0.049 1.1E-06 46.3 7.3 46 148-194 8-53 (264)
212 TIGR03325 BphB_TodD cis-2,3-di 95.5 0.057 1.2E-06 46.1 7.5 44 150-194 4-47 (262)
213 cd01080 NAD_bind_m-THF_DH_Cycl 95.5 0.16 3.6E-06 40.3 9.4 95 130-245 22-119 (168)
214 PRK15469 ghrA bifunctional gly 95.5 0.087 1.9E-06 46.4 8.6 85 150-243 135-227 (312)
215 PRK07326 short chain dehydroge 95.5 0.057 1.2E-06 45.2 7.3 42 150-192 5-46 (237)
216 COG1748 LYS9 Saccharopine dehy 95.5 0.052 1.1E-06 48.8 7.1 91 152-244 2-101 (389)
217 PRK06500 short chain dehydroge 95.5 0.078 1.7E-06 44.7 8.1 73 150-223 5-89 (249)
218 PRK14103 trans-aconitate 2-met 95.4 0.24 5.2E-06 42.2 10.9 95 143-241 22-125 (255)
219 PRK08618 ornithine cyclodeamin 95.4 0.19 4.2E-06 44.5 10.4 93 147-244 123-223 (325)
220 PRK06505 enoyl-(acyl carrier p 95.4 0.086 1.9E-06 45.4 8.1 37 150-187 6-44 (271)
221 PRK07677 short chain dehydroge 95.3 0.058 1.3E-06 45.7 6.9 41 151-192 1-41 (252)
222 KOG1205 Predicted dehydrogenas 95.3 0.083 1.8E-06 45.4 7.6 41 150-192 11-52 (282)
223 cd01079 NAD_bind_m-THF_DH NAD 95.3 0.16 3.6E-06 41.0 8.8 110 130-244 31-158 (197)
224 PRK05867 short chain dehydroge 95.3 0.061 1.3E-06 45.6 6.9 42 150-192 8-49 (253)
225 PRK06180 short chain dehydroge 95.3 0.091 2E-06 45.3 8.0 44 150-194 3-46 (277)
226 PRK09291 short chain dehydroge 95.3 0.063 1.4E-06 45.5 6.9 72 151-223 2-82 (257)
227 PRK14191 bifunctional 5,10-met 95.3 0.098 2.1E-06 45.0 7.9 95 131-245 136-232 (285)
228 PRK07502 cyclohexadienyl dehyd 95.3 0.12 2.6E-06 45.4 8.7 87 152-243 7-101 (307)
229 PRK07831 short chain dehydroge 95.2 0.098 2.1E-06 44.6 8.1 44 148-192 14-58 (262)
230 PF01209 Ubie_methyltran: ubiE 95.2 0.11 2.5E-06 43.6 8.1 98 144-243 41-154 (233)
231 PRK08265 short chain dehydroge 95.2 0.11 2.3E-06 44.4 8.2 73 150-223 5-89 (261)
232 PLN02233 ubiquinone biosynthes 95.2 0.33 7.1E-06 41.6 11.0 97 144-243 67-183 (261)
233 PRK07806 short chain dehydroge 95.2 0.27 5.8E-06 41.4 10.5 36 150-186 5-40 (248)
234 PLN02244 tocopherol O-methyltr 95.1 0.33 7.2E-06 43.3 11.3 92 149-243 117-224 (340)
235 PRK01683 trans-aconitate 2-met 95.1 0.37 8E-06 41.1 11.2 95 144-241 25-129 (258)
236 PRK07478 short chain dehydroge 95.1 0.13 2.8E-06 43.6 8.2 42 150-192 5-46 (254)
237 PF13241 NAD_binding_7: Putati 95.1 0.1 2.2E-06 37.7 6.4 85 150-244 6-93 (103)
238 TIGR01832 kduD 2-deoxy-D-gluco 95.0 0.12 2.6E-06 43.5 8.0 73 150-223 4-89 (248)
239 PRK09072 short chain dehydroge 95.0 0.11 2.4E-06 44.3 7.7 42 150-192 4-45 (263)
240 PRK14175 bifunctional 5,10-met 95.0 0.31 6.8E-06 42.1 10.3 95 131-245 137-233 (286)
241 PRK12809 putative oxidoreducta 95.0 0.067 1.4E-06 52.1 6.9 73 150-224 309-405 (639)
242 PRK08017 oxidoreductase; Provi 95.0 0.069 1.5E-06 45.2 6.4 71 152-223 3-83 (256)
243 PRK07453 protochlorophyllide o 95.0 0.13 2.8E-06 45.5 8.2 42 150-192 5-46 (322)
244 PF13823 ADH_N_assoc: Alcohol 95.0 0.017 3.7E-07 29.2 1.5 22 1-27 1-22 (23)
245 PRK08415 enoyl-(acyl carrier p 95.0 0.15 3.2E-06 44.0 8.4 73 150-223 4-92 (274)
246 PRK08261 fabG 3-ketoacyl-(acyl 95.0 0.024 5.2E-07 52.7 3.7 82 145-245 28-126 (450)
247 PRK14176 bifunctional 5,10-met 95.0 0.21 4.5E-06 43.1 9.0 95 130-244 142-238 (287)
248 PRK08410 2-hydroxyacid dehydro 95.0 0.11 2.4E-06 45.7 7.6 101 150-274 144-252 (311)
249 PF03446 NAD_binding_2: NAD bi 95.0 0.24 5.2E-06 39.1 8.9 104 152-274 2-114 (163)
250 PF06325 PrmA: Ribosomal prote 94.9 0.15 3.2E-06 44.4 8.1 91 147-242 158-259 (295)
251 PRK08340 glucose-1-dehydrogena 94.9 0.14 3E-06 43.6 8.1 39 153-192 2-40 (259)
252 PRK06841 short chain dehydroge 94.9 0.12 2.7E-06 43.6 7.7 45 150-195 14-58 (255)
253 PF01262 AlaDh_PNT_C: Alanine 94.9 0.075 1.6E-06 42.2 5.8 90 151-242 20-139 (168)
254 TIGR01318 gltD_gamma_fam gluta 94.9 0.081 1.8E-06 49.4 6.9 74 149-224 139-236 (467)
255 PRK07533 enoyl-(acyl carrier p 94.9 0.11 2.5E-06 44.2 7.4 38 150-188 9-48 (258)
256 PRK08261 fabG 3-ketoacyl-(acyl 94.8 0.23 4.9E-06 46.2 9.8 73 150-223 209-293 (450)
257 KOG1014 17 beta-hydroxysteroid 94.8 0.068 1.5E-06 46.1 5.7 43 149-193 47-90 (312)
258 PLN02490 MPBQ/MSBQ methyltrans 94.8 0.3 6.6E-06 43.4 10.0 92 149-242 112-215 (340)
259 PRK00216 ubiE ubiquinone/menaq 94.8 0.65 1.4E-05 38.8 11.9 97 144-243 45-159 (239)
260 PTZ00098 phosphoethanolamine N 94.8 0.57 1.2E-05 40.2 11.6 99 142-243 44-157 (263)
261 PRK10792 bifunctional 5,10-met 94.8 0.22 4.9E-06 42.9 8.9 94 131-244 138-233 (285)
262 PRK07454 short chain dehydroge 94.8 0.19 4.2E-06 42.1 8.5 43 149-192 4-46 (241)
263 PRK14027 quinate/shikimate deh 94.8 0.11 2.3E-06 45.1 7.0 73 149-223 125-203 (283)
264 PRK07424 bifunctional sterol d 94.7 0.071 1.5E-06 48.6 6.0 73 150-223 177-254 (406)
265 PRK05717 oxidoreductase; Valid 94.7 0.17 3.7E-06 42.9 8.1 46 150-196 9-55 (255)
266 PRK12480 D-lactate dehydrogena 94.7 0.28 6E-06 43.6 9.5 102 150-274 145-254 (330)
267 KOG0069 Glyoxylate/hydroxypyru 94.7 0.24 5.2E-06 43.6 8.9 86 149-242 160-253 (336)
268 PRK07774 short chain dehydroge 94.7 0.13 2.8E-06 43.4 7.3 42 150-192 5-46 (250)
269 PRK13940 glutamyl-tRNA reducta 94.7 0.18 4E-06 46.1 8.5 73 149-225 179-253 (414)
270 PRK07340 ornithine cyclodeamin 94.7 0.14 3E-06 45.0 7.5 92 149-244 123-219 (304)
271 TIGR00507 aroE shikimate 5-deh 94.7 0.3 6.5E-06 42.0 9.5 89 148-242 114-214 (270)
272 PRK08643 acetoin reductase; Va 94.7 0.17 3.8E-06 42.8 8.0 41 151-192 2-42 (256)
273 PRK08213 gluconate 5-dehydroge 94.7 0.18 3.8E-06 42.9 8.0 42 150-192 11-52 (259)
274 PLN00203 glutamyl-tRNA reducta 94.7 0.19 4.1E-06 47.4 8.7 71 151-224 266-339 (519)
275 PLN03075 nicotianamine synthas 94.6 0.63 1.4E-05 40.4 11.2 93 149-242 122-233 (296)
276 PRK06603 enoyl-(acyl carrier p 94.6 0.19 4E-06 42.9 8.1 36 150-186 7-44 (260)
277 PRK05875 short chain dehydroge 94.6 0.13 2.8E-06 44.2 7.2 42 150-192 6-47 (276)
278 PF08704 GCD14: tRNA methyltra 94.6 0.81 1.8E-05 38.7 11.6 114 144-272 34-163 (247)
279 PRK08862 short chain dehydroge 94.6 0.2 4.4E-06 41.9 8.0 42 150-192 4-45 (227)
280 PF03435 Saccharop_dh: Sacchar 94.5 0.09 2E-06 47.8 6.2 88 154-242 1-98 (386)
281 PRK06914 short chain dehydroge 94.5 0.17 3.8E-06 43.5 7.7 41 151-192 3-43 (280)
282 PRK08277 D-mannonate oxidoredu 94.5 0.17 3.7E-06 43.5 7.6 42 150-192 9-50 (278)
283 PRK00312 pcm protein-L-isoaspa 94.5 1.2 2.7E-05 36.6 12.4 97 143-243 71-176 (212)
284 PRK12384 sorbitol-6-phosphate 94.4 0.17 3.6E-06 43.0 7.4 41 151-192 2-42 (259)
285 PF02882 THF_DHG_CYH_C: Tetrah 94.4 0.47 1E-05 37.3 9.2 96 130-245 14-111 (160)
286 PF01118 Semialdhyde_dh: Semia 94.4 0.13 2.7E-06 38.4 5.8 89 153-244 1-99 (121)
287 PRK06079 enoyl-(acyl carrier p 94.4 0.16 3.5E-06 43.1 7.1 45 150-195 6-52 (252)
288 KOG1201 Hydroxysteroid 17-beta 94.4 0.24 5.2E-06 42.6 8.0 73 149-223 36-123 (300)
289 PLN02780 ketoreductase/ oxidor 94.4 0.098 2.1E-06 46.3 5.9 42 150-192 52-93 (320)
290 PRK08263 short chain dehydroge 94.4 0.24 5.2E-06 42.6 8.3 72 151-223 3-86 (275)
291 TIGR00438 rrmJ cell division p 94.3 0.49 1.1E-05 38.2 9.5 93 145-242 27-146 (188)
292 PRK06141 ornithine cyclodeamin 94.3 0.37 8.1E-06 42.5 9.4 92 148-243 122-220 (314)
293 PRK08339 short chain dehydroge 94.3 0.12 2.5E-06 44.3 6.1 42 150-192 7-48 (263)
294 smart00846 Gp_dh_N Glyceraldeh 94.3 1 2.2E-05 35.0 10.7 104 153-257 2-133 (149)
295 PLN02253 xanthoxin dehydrogena 94.3 0.17 3.7E-06 43.5 7.2 42 150-192 17-58 (280)
296 cd05311 NAD_bind_2_malic_enz N 94.3 0.61 1.3E-05 39.0 10.1 88 149-242 23-128 (226)
297 TIGR01777 yfcH conserved hypot 94.3 0.048 1E-06 47.2 3.7 66 154-223 1-66 (292)
298 PRK08589 short chain dehydroge 94.3 0.23 4.9E-06 42.7 7.9 38 150-189 5-42 (272)
299 COG2264 PrmA Ribosomal protein 94.3 0.51 1.1E-05 41.0 9.8 141 82-242 109-263 (300)
300 PRK14173 bifunctional 5,10-met 94.3 0.32 6.8E-06 42.0 8.5 95 131-245 134-230 (287)
301 PRK06138 short chain dehydroge 94.3 0.16 3.6E-06 42.7 6.9 42 150-192 4-45 (252)
302 PRK06932 glycerate dehydrogena 94.2 0.2 4.3E-06 44.2 7.5 100 150-274 146-253 (314)
303 COG0031 CysK Cysteine synthase 94.2 0.39 8.5E-06 41.6 9.0 59 144-204 55-116 (300)
304 PRK08267 short chain dehydroge 94.2 0.24 5.2E-06 42.1 7.9 41 152-193 2-42 (260)
305 PRK12823 benD 1,6-dihydroxycyc 94.2 0.21 4.6E-06 42.4 7.6 37 150-187 7-43 (260)
306 PRK13403 ketol-acid reductoiso 94.2 0.26 5.6E-06 43.2 7.9 85 149-241 14-105 (335)
307 PRK08264 short chain dehydroge 94.2 0.22 4.7E-06 41.7 7.5 40 150-190 5-45 (238)
308 PRK06179 short chain dehydroge 94.2 0.12 2.5E-06 44.3 6.0 39 151-190 4-42 (270)
309 PRK11207 tellurite resistance 94.2 0.77 1.7E-05 37.4 10.5 93 145-242 25-134 (197)
310 PRK06484 short chain dehydroge 94.2 0.19 4.2E-06 47.5 8.0 73 150-223 4-88 (520)
311 PRK06482 short chain dehydroge 94.2 0.22 4.7E-06 42.8 7.6 42 152-194 3-44 (276)
312 PRK08690 enoyl-(acyl carrier p 94.2 0.19 4.1E-06 42.9 7.2 36 150-186 5-42 (261)
313 PRK06483 dihydromonapterin red 94.2 0.29 6.3E-06 40.9 8.2 72 151-223 2-83 (236)
314 PLN02986 cinnamyl-alcohol dehy 94.2 0.17 3.7E-06 44.6 7.1 73 150-223 4-86 (322)
315 TIGR02632 RhaD_aldol-ADH rhamn 94.2 0.23 5E-06 48.6 8.6 42 150-192 413-454 (676)
316 PRK07402 precorrin-6B methylas 94.2 0.72 1.6E-05 37.5 10.3 97 144-242 34-142 (196)
317 PRK13581 D-3-phosphoglycerate 94.1 0.32 6.9E-06 46.2 9.1 85 150-243 139-231 (526)
318 PRK06436 glycerate dehydrogena 94.1 0.3 6.6E-06 42.7 8.3 82 150-243 121-210 (303)
319 COG0111 SerA Phosphoglycerate 94.1 0.29 6.2E-06 43.3 8.2 103 151-274 142-253 (324)
320 PRK06720 hypothetical protein; 94.1 0.27 5.8E-06 39.1 7.3 41 150-191 15-55 (169)
321 cd01075 NAD_bind_Leu_Phe_Val_D 94.1 0.32 7E-06 39.8 8.0 78 149-233 26-107 (200)
322 PRK10538 malonic semialdehyde 94.1 0.26 5.7E-06 41.6 7.8 70 153-223 2-83 (248)
323 PRK06484 short chain dehydroge 94.1 0.25 5.5E-06 46.7 8.4 73 150-223 268-352 (520)
324 PRK05884 short chain dehydroge 94.1 0.24 5.1E-06 41.2 7.4 70 153-223 2-78 (223)
325 KOG1199 Short-chain alcohol de 94.1 0.2 4.3E-06 39.4 6.2 73 150-223 8-92 (260)
326 PRK12769 putative oxidoreducta 94.0 0.15 3.2E-06 49.9 6.9 73 150-224 326-422 (654)
327 PRK06953 short chain dehydroge 94.0 0.19 4.1E-06 41.6 6.7 71 152-223 2-79 (222)
328 PRK15409 bifunctional glyoxyla 94.0 0.33 7.1E-06 43.0 8.4 85 150-243 144-237 (323)
329 PRK12481 2-deoxy-D-gluconate 3 94.0 0.29 6.4E-06 41.4 7.9 73 150-223 7-92 (251)
330 PRK12548 shikimate 5-dehydroge 94.0 0.2 4.3E-06 43.6 6.9 72 150-223 125-208 (289)
331 PRK06114 short chain dehydroge 94.0 0.34 7.4E-06 41.0 8.3 37 150-187 7-43 (254)
332 PRK06487 glycerate dehydrogena 93.9 0.29 6.3E-06 43.2 7.9 80 150-243 147-234 (317)
333 PRK08159 enoyl-(acyl carrier p 93.9 0.32 6.8E-06 41.9 8.1 36 150-186 9-46 (272)
334 PLN00141 Tic62-NAD(P)-related 93.9 0.22 4.7E-06 42.3 7.0 74 149-223 15-94 (251)
335 TIGR03206 benzo_BadH 2-hydroxy 93.9 0.32 6.9E-06 40.9 8.0 42 150-192 2-43 (250)
336 PRK06198 short chain dehydroge 93.9 0.27 5.8E-06 41.7 7.6 40 150-190 5-45 (260)
337 PRK14189 bifunctional 5,10-met 93.9 0.45 9.8E-06 41.1 8.8 95 131-245 137-233 (285)
338 TIGR01934 MenG_MenH_UbiE ubiqu 93.9 0.93 2E-05 37.4 10.7 97 144-243 33-144 (223)
339 KOG1252 Cystathionine beta-syn 93.9 0.33 7.2E-06 42.4 7.8 63 139-202 87-156 (362)
340 PRK14186 bifunctional 5,10-met 93.9 0.44 9.6E-06 41.4 8.7 95 131-245 137-233 (297)
341 PRK07231 fabG 3-ketoacyl-(acyl 93.8 0.16 3.5E-06 42.8 6.0 42 150-192 4-45 (251)
342 PRK14192 bifunctional 5,10-met 93.8 0.83 1.8E-05 39.6 10.2 77 148-244 156-233 (283)
343 PF02558 ApbA: Ketopantoate re 93.8 0.24 5.2E-06 38.3 6.4 86 154-242 1-101 (151)
344 PRK04266 fibrillarin; Provisio 93.7 1.4 2.9E-05 36.9 11.2 127 144-276 66-206 (226)
345 PRK01438 murD UDP-N-acetylmura 93.7 0.35 7.6E-06 45.4 8.6 69 149-223 14-87 (480)
346 TIGR03840 TMPT_Se_Te thiopurin 93.7 0.79 1.7E-05 37.9 9.7 91 149-243 33-153 (213)
347 PRK08226 short chain dehydroge 93.7 0.36 7.8E-06 41.0 8.1 40 150-190 5-44 (263)
348 TIGR01327 PGDH D-3-phosphoglyc 93.7 0.43 9.3E-06 45.3 9.1 86 150-243 137-230 (525)
349 TIGR02752 MenG_heptapren 2-hep 93.7 0.78 1.7E-05 38.3 9.9 97 144-242 39-151 (231)
350 PRK14170 bifunctional 5,10-met 93.7 0.45 9.9E-06 41.0 8.4 95 131-245 136-232 (284)
351 PF05368 NmrA: NmrA-like famil 93.7 0.17 3.6E-06 42.4 5.8 68 154-223 1-73 (233)
352 PLN02989 cinnamyl-alcohol dehy 93.7 0.23 5E-06 43.8 6.9 74 149-223 3-86 (325)
353 TIGR01470 cysG_Nterm siroheme 93.6 1.3 2.8E-05 36.4 10.8 89 150-242 8-100 (205)
354 PLN02336 phosphoethanolamine N 93.6 1.2 2.7E-05 41.6 12.0 96 144-242 260-369 (475)
355 PRK07856 short chain dehydroge 93.6 0.31 6.7E-06 41.2 7.4 38 150-188 5-42 (252)
356 PRK06463 fabG 3-ketoacyl-(acyl 93.6 0.43 9.2E-06 40.4 8.3 73 150-223 6-88 (255)
357 PRK12936 3-ketoacyl-(acyl-carr 93.6 0.44 9.5E-06 39.9 8.3 73 150-223 5-89 (245)
358 PRK05854 short chain dehydroge 93.6 0.18 4E-06 44.3 6.1 42 150-192 13-54 (313)
359 PRK07062 short chain dehydroge 93.5 0.19 4.1E-06 42.8 6.0 42 150-192 7-48 (265)
360 PRK07417 arogenate dehydrogena 93.5 0.45 9.8E-06 41.1 8.4 84 153-242 2-91 (279)
361 PRK07063 short chain dehydroge 93.5 0.19 4.2E-06 42.7 6.0 42 150-192 6-47 (260)
362 PRK12828 short chain dehydroge 93.5 0.2 4.3E-06 41.8 6.0 40 150-190 6-45 (239)
363 PRK07984 enoyl-(acyl carrier p 93.5 0.31 6.7E-06 41.7 7.2 36 150-186 5-42 (262)
364 PRK08655 prephenate dehydrogen 93.5 0.42 9.1E-06 44.2 8.5 84 153-242 2-92 (437)
365 COG2519 GCD14 tRNA(1-methylade 93.5 3.6 7.8E-05 34.7 13.0 113 144-271 88-211 (256)
366 PRK08217 fabG 3-ketoacyl-(acyl 93.5 0.2 4.3E-06 42.2 6.0 42 150-192 4-45 (253)
367 KOG1540 Ubiquinone biosynthesi 93.5 1.1 2.3E-05 37.8 9.8 98 147-244 95-216 (296)
368 COG3963 Phospholipid N-methylt 93.5 1.2 2.5E-05 35.1 9.4 114 128-243 26-157 (194)
369 cd05212 NAD_bind_m-THF_DH_Cycl 93.4 0.99 2.2E-05 34.6 9.1 93 131-243 7-101 (140)
370 PRK08303 short chain dehydroge 93.4 0.4 8.6E-06 42.1 7.9 35 150-185 7-41 (305)
371 PRK07576 short chain dehydroge 93.4 0.21 4.5E-06 42.7 6.1 42 150-192 8-49 (264)
372 PRK14982 acyl-ACP reductase; P 93.4 0.25 5.5E-06 43.8 6.6 91 149-244 153-248 (340)
373 PRK06398 aldose dehydrogenase; 93.4 0.26 5.7E-06 41.9 6.6 38 150-188 5-42 (258)
374 PRK14618 NAD(P)H-dependent gly 93.4 0.42 9.2E-06 42.4 8.1 88 153-242 6-104 (328)
375 PRK07775 short chain dehydroge 93.3 0.46 9.9E-06 40.8 8.1 41 151-192 10-50 (274)
376 PRK07523 gluconate 5-dehydroge 93.3 0.21 4.6E-06 42.3 6.0 42 150-192 9-50 (255)
377 PLN02657 3,8-divinyl protochlo 93.3 0.25 5.5E-06 45.0 6.7 42 146-188 55-96 (390)
378 PRK06997 enoyl-(acyl carrier p 93.3 0.26 5.6E-06 42.1 6.5 34 150-184 5-40 (260)
379 PRK06522 2-dehydropantoate 2-r 93.3 0.77 1.7E-05 40.1 9.6 86 153-241 2-99 (304)
380 PRK08703 short chain dehydroge 93.3 0.24 5.1E-06 41.5 6.1 42 150-192 5-46 (239)
381 PRK14188 bifunctional 5,10-met 93.3 0.6 1.3E-05 40.6 8.5 94 131-245 137-233 (296)
382 PRK14194 bifunctional 5,10-met 93.2 0.68 1.5E-05 40.3 8.8 94 131-244 138-233 (301)
383 KOG1502 Flavonol reductase/cin 93.2 0.31 6.8E-06 42.7 6.7 73 150-223 5-87 (327)
384 PLN02427 UDP-apiose/xylose syn 93.2 0.31 6.7E-06 44.3 7.1 78 146-223 9-95 (386)
385 TIGR02992 ectoine_eutC ectoine 93.2 0.98 2.1E-05 40.1 10.0 92 149-244 127-226 (326)
386 PRK07890 short chain dehydroge 93.2 0.25 5.4E-06 41.8 6.1 42 150-192 4-45 (258)
387 TIGR00477 tehB tellurite resis 93.1 1.1 2.3E-05 36.5 9.5 92 146-242 26-133 (195)
388 KOG0725 Reductases with broad 93.1 0.24 5.3E-06 42.6 5.9 43 149-192 6-48 (270)
389 PRK06172 short chain dehydroge 93.1 0.24 5.3E-06 41.8 6.0 42 150-192 6-47 (253)
390 PRK06719 precorrin-2 dehydroge 93.1 1 2.2E-05 35.3 9.0 85 150-240 12-98 (157)
391 PRK14177 bifunctional 5,10-met 93.1 0.71 1.5E-05 39.8 8.6 94 131-244 138-233 (284)
392 PRK08993 2-deoxy-D-gluconate 3 93.1 0.55 1.2E-05 39.7 8.1 35 150-185 9-43 (253)
393 PRK14169 bifunctional 5,10-met 93.1 0.73 1.6E-05 39.7 8.7 95 131-245 135-231 (282)
394 PRK07109 short chain dehydroge 93.1 0.24 5.1E-06 44.1 6.0 73 150-223 7-94 (334)
395 PRK07035 short chain dehydroge 93.1 0.25 5.4E-06 41.7 6.0 42 150-192 7-48 (252)
396 PF02254 TrkA_N: TrkA-N domain 93.1 1 2.2E-05 33.0 8.5 85 154-241 1-95 (116)
397 COG2227 UbiG 2-polyprenyl-3-me 93.0 0.4 8.6E-06 40.0 6.7 89 149-241 58-160 (243)
398 PLN02616 tetrahydrofolate dehy 93.0 0.61 1.3E-05 41.5 8.3 94 132-245 211-306 (364)
399 COG1090 Predicted nucleoside-d 93.0 0.2 4.4E-06 42.5 5.1 64 154-223 1-65 (297)
400 PRK08219 short chain dehydroge 93.0 0.41 8.8E-06 39.6 7.1 70 152-223 4-80 (227)
401 PRK14190 bifunctional 5,10-met 93.0 0.71 1.5E-05 39.9 8.5 95 131-245 137-233 (284)
402 PRK06194 hypothetical protein; 93.0 0.25 5.4E-06 42.7 5.9 42 150-192 5-46 (287)
403 PRK08945 putative oxoacyl-(acy 93.0 0.28 6.1E-06 41.3 6.1 45 147-192 8-52 (247)
404 PRK06718 precorrin-2 dehydroge 92.9 1.3 2.8E-05 36.3 9.7 89 150-242 9-100 (202)
405 PRK06197 short chain dehydroge 92.9 0.24 5.3E-06 43.3 5.9 41 150-191 15-55 (306)
406 TIGR00537 hemK_rel_arch HemK-r 92.9 2.1 4.5E-05 34.2 10.9 69 147-221 16-89 (179)
407 PRK08125 bifunctional UDP-gluc 92.9 0.29 6.2E-06 47.9 6.9 77 147-223 311-391 (660)
408 PRK05876 short chain dehydroge 92.9 0.27 5.8E-06 42.4 6.0 42 150-192 5-46 (275)
409 PRK06077 fabG 3-ketoacyl-(acyl 92.9 1.4 3.1E-05 37.0 10.4 33 151-184 6-38 (252)
410 PRK07791 short chain dehydroge 92.9 0.74 1.6E-05 39.9 8.8 37 149-186 4-40 (286)
411 KOG1210 Predicted 3-ketosphing 92.9 0.38 8.3E-06 41.7 6.6 51 145-196 27-78 (331)
412 TIGR01532 E4PD_g-proteo D-eryt 92.8 0.98 2.1E-05 40.0 9.4 92 153-245 1-123 (325)
413 TIGR03466 HpnA hopanoid-associ 92.8 0.13 2.8E-06 45.2 4.0 70 153-223 2-73 (328)
414 PRK14193 bifunctional 5,10-met 92.8 0.71 1.5E-05 39.8 8.3 96 131-245 137-235 (284)
415 PRK06101 short chain dehydroge 92.8 0.26 5.5E-06 41.4 5.6 43 152-195 2-44 (240)
416 PRK13394 3-hydroxybutyrate deh 92.8 0.29 6.4E-06 41.5 6.1 42 150-192 6-47 (262)
417 PRK12743 oxidoreductase; Provi 92.8 0.66 1.4E-05 39.3 8.2 39 151-190 2-41 (256)
418 PRK11036 putative S-adenosyl-L 92.8 0.77 1.7E-05 39.1 8.5 89 149-241 43-148 (255)
419 PLN02516 methylenetetrahydrofo 92.8 0.94 2E-05 39.4 8.9 95 131-245 146-242 (299)
420 PLN02896 cinnamyl-alcohol dehy 92.7 0.41 8.9E-06 42.8 7.2 74 149-223 8-88 (353)
421 COG2084 MmsB 3-hydroxyisobutyr 92.7 0.89 1.9E-05 39.3 8.8 103 153-274 2-115 (286)
422 PRK14166 bifunctional 5,10-met 92.7 0.81 1.8E-05 39.4 8.5 95 131-245 136-232 (282)
423 PRK12749 quinate/shikimate deh 92.7 0.8 1.7E-05 39.8 8.6 72 150-223 123-205 (288)
424 PRK08594 enoyl-(acyl carrier p 92.7 0.58 1.3E-05 39.8 7.8 35 150-185 6-42 (257)
425 PRK07024 short chain dehydroge 92.7 0.3 6.5E-06 41.5 6.0 41 151-192 2-42 (257)
426 PRK06125 short chain dehydroge 92.7 0.31 6.7E-06 41.4 6.1 42 150-192 6-47 (259)
427 PRK07904 short chain dehydroge 92.7 0.32 6.9E-06 41.3 6.1 41 148-188 5-45 (253)
428 TIGR02371 ala_DH_arch alanine 92.7 0.57 1.2E-05 41.5 7.8 92 149-244 126-224 (325)
429 PF03807 F420_oxidored: NADP o 92.6 0.62 1.3E-05 32.9 6.7 83 153-241 1-93 (96)
430 PLN02686 cinnamoyl-CoA reducta 92.6 0.39 8.4E-06 43.4 6.9 45 149-194 51-95 (367)
431 PRK08628 short chain dehydroge 92.6 0.28 6E-06 41.6 5.7 43 150-193 6-48 (258)
432 PRK05565 fabG 3-ketoacyl-(acyl 92.6 0.43 9.3E-06 40.0 6.8 41 151-192 5-46 (247)
433 PRK03562 glutathione-regulated 92.6 0.51 1.1E-05 45.8 8.0 90 151-242 400-498 (621)
434 PF02670 DXP_reductoisom: 1-de 92.6 0.66 1.4E-05 35.0 6.9 86 154-240 1-119 (129)
435 PRK06128 oxidoreductase; Provi 92.5 0.75 1.6E-05 40.1 8.4 35 150-185 54-88 (300)
436 PRK14172 bifunctional 5,10-met 92.5 1.4 3.1E-05 37.9 9.6 95 131-245 137-233 (278)
437 PRK08085 gluconate 5-dehydroge 92.5 0.33 7.1E-06 41.1 5.9 42 150-192 8-49 (254)
438 PRK07889 enoyl-(acyl carrier p 92.4 0.69 1.5E-05 39.3 7.8 36 150-186 6-43 (256)
439 PRK09186 flagellin modificatio 92.4 0.34 7.4E-06 40.9 5.9 42 150-192 3-44 (256)
440 PRK07067 sorbitol dehydrogenas 92.4 0.34 7.4E-06 41.1 5.9 43 150-193 5-47 (257)
441 PRK06823 ornithine cyclodeamin 92.4 1.6 3.4E-05 38.6 10.1 92 149-244 126-224 (315)
442 PRK12939 short chain dehydroge 92.4 0.36 7.9E-06 40.5 6.0 42 150-192 6-47 (250)
443 PRK03659 glutathione-regulated 92.4 0.81 1.8E-05 44.2 9.0 91 151-243 400-499 (601)
444 PRK06124 gluconate 5-dehydroge 92.3 0.37 8E-06 40.8 6.1 42 150-192 10-51 (256)
445 PRK09242 tropinone reductase; 92.3 0.36 7.9E-06 40.9 6.0 42 150-192 8-49 (257)
446 PRK00536 speE spermidine synth 92.3 0.87 1.9E-05 38.9 8.1 91 150-244 72-173 (262)
447 PLN02662 cinnamyl-alcohol dehy 92.3 0.36 7.8E-06 42.4 6.1 72 151-223 4-85 (322)
448 PRK08278 short chain dehydroge 92.3 0.76 1.6E-05 39.4 8.0 37 150-187 5-41 (273)
449 PF07991 IlvN: Acetohydroxy ac 92.2 0.67 1.5E-05 36.3 6.7 84 150-241 3-94 (165)
450 PRK06181 short chain dehydroge 92.2 0.36 7.7E-06 41.1 5.8 41 151-192 1-41 (263)
451 PRK12429 3-hydroxybutyrate deh 92.2 0.38 8.3E-06 40.6 6.0 42 150-192 3-44 (258)
452 PRK07370 enoyl-(acyl carrier p 92.2 0.65 1.4E-05 39.5 7.4 34 150-184 5-40 (258)
453 PRK14178 bifunctional 5,10-met 92.2 1.8 4E-05 37.2 9.9 95 131-245 131-227 (279)
454 PF02423 OCD_Mu_crystall: Orni 92.2 0.37 8E-06 42.5 5.9 93 149-245 126-227 (313)
455 TIGR00452 methyltransferase, p 92.1 2 4.4E-05 37.8 10.5 94 144-241 115-224 (314)
456 KOG1270 Methyltransferases [Co 92.1 0.56 1.2E-05 39.6 6.5 87 151-241 90-194 (282)
457 PRK05855 short chain dehydroge 92.1 0.63 1.4E-05 44.5 8.0 42 150-192 314-355 (582)
458 TIGR02622 CDP_4_6_dhtase CDP-g 92.1 0.29 6.2E-06 43.8 5.3 38 150-188 3-40 (349)
459 TIGR03589 PseB UDP-N-acetylglu 92.1 0.55 1.2E-05 41.5 7.0 74 150-223 3-83 (324)
460 PRK13255 thiopurine S-methyltr 92.1 1.8 3.9E-05 35.9 9.6 91 147-241 34-154 (218)
461 PF10727 Rossmann-like: Rossma 92.1 0.55 1.2E-05 35.4 5.9 78 151-235 10-91 (127)
462 COG0373 HemA Glutamyl-tRNA red 92.0 0.72 1.6E-05 42.0 7.6 91 149-244 176-276 (414)
463 PRK08251 short chain dehydroge 92.0 0.4 8.7E-06 40.3 5.9 41 151-192 2-42 (248)
464 PRK05653 fabG 3-ketoacyl-(acyl 92.0 0.41 8.9E-06 40.0 5.9 42 150-192 4-45 (246)
465 PRK09260 3-hydroxybutyryl-CoA 92.0 0.34 7.4E-06 42.1 5.5 40 152-193 2-41 (288)
466 COG4122 Predicted O-methyltran 92.0 0.99 2.1E-05 37.4 7.8 97 145-243 54-167 (219)
467 PRK14179 bifunctional 5,10-met 91.9 1.3 2.9E-05 38.2 8.8 93 131-245 137-233 (284)
468 PRK12826 3-ketoacyl-(acyl-carr 91.9 0.41 8.9E-06 40.2 5.9 41 150-191 5-45 (251)
469 PRK07666 fabG 3-ketoacyl-(acyl 91.9 0.45 9.7E-06 39.8 6.0 42 150-192 6-47 (239)
470 PRK14182 bifunctional 5,10-met 91.9 1.4 3E-05 38.1 8.9 95 131-245 136-232 (282)
471 TIGR00563 rsmB ribosomal RNA s 91.9 3.2 6.9E-05 38.3 12.1 96 144-241 232-367 (426)
472 PRK14106 murD UDP-N-acetylmura 91.9 0.81 1.7E-05 42.5 8.2 69 150-223 4-77 (450)
473 TIGR00138 gidB 16S rRNA methyl 91.9 2 4.4E-05 34.5 9.5 89 150-241 42-141 (181)
474 PLN02520 bifunctional 3-dehydr 91.8 0.51 1.1E-05 44.8 6.9 70 150-223 378-448 (529)
475 PRK14187 bifunctional 5,10-met 91.8 1.3 2.8E-05 38.5 8.6 95 131-245 139-235 (294)
476 PRK07102 short chain dehydroge 91.8 0.42 9.2E-06 40.1 5.7 40 152-192 2-41 (243)
477 PRK14180 bifunctional 5,10-met 91.8 2 4.3E-05 37.1 9.6 95 131-245 137-233 (282)
478 PRK10669 putative cation:proto 91.8 1.1 2.3E-05 43.0 9.0 71 152-224 418-491 (558)
479 TIGR01963 PHB_DH 3-hydroxybuty 91.7 0.42 9E-06 40.3 5.7 41 151-192 1-41 (255)
480 PLN00198 anthocyanidin reducta 91.7 0.56 1.2E-05 41.7 6.7 73 150-223 8-89 (338)
481 PRK14171 bifunctional 5,10-met 91.7 1.5 3.2E-05 38.0 8.8 95 131-245 138-234 (288)
482 PRK12937 short chain dehydroge 91.7 1.1 2.3E-05 37.6 8.1 35 150-185 4-38 (245)
483 PRK05447 1-deoxy-D-xylulose 5- 91.6 0.82 1.8E-05 41.2 7.5 89 152-240 2-120 (385)
484 KOG1208 Dehydrogenases with di 91.6 0.48 1E-05 41.7 6.0 43 149-192 33-75 (314)
485 PRK07589 ornithine cyclodeamin 91.6 1 2.2E-05 40.3 8.0 92 149-244 127-227 (346)
486 PLN00016 RNA-binding protein; 91.5 0.88 1.9E-05 41.2 7.8 91 150-242 51-164 (378)
487 PRK14901 16S rRNA methyltransf 91.5 3.7 7.9E-05 38.0 12.0 95 145-241 247-383 (434)
488 COG0334 GdhA Glutamate dehydro 91.5 2.7 5.9E-05 38.0 10.5 45 141-187 196-241 (411)
489 PLN02214 cinnamoyl-CoA reducta 91.5 0.7 1.5E-05 41.2 7.1 73 150-223 9-90 (342)
490 PRK06935 2-deoxy-D-gluconate 3 91.5 0.46 1E-05 40.3 5.7 35 150-185 14-48 (258)
491 KOG1200 Mitochondrial/plastidi 91.4 1 2.2E-05 36.4 6.9 71 152-223 15-99 (256)
492 PF01210 NAD_Gly3P_dh_N: NAD-d 91.4 0.37 8.1E-06 37.7 4.7 80 153-234 1-91 (157)
493 PRK14904 16S rRNA methyltransf 91.4 4.1 9E-05 37.8 12.3 95 144-241 244-376 (445)
494 PRK00121 trmB tRNA (guanine-N( 91.4 4.9 0.00011 32.9 11.5 110 150-274 40-175 (202)
495 PRK11908 NAD-dependent epimera 91.4 0.51 1.1E-05 42.1 6.1 71 153-223 3-77 (347)
496 PRK09310 aroDE bifunctional 3- 91.4 0.72 1.6E-05 43.2 7.2 68 150-223 331-399 (477)
497 PRK15451 tRNA cmo(5)U34 methyl 91.3 1.3 2.7E-05 37.6 8.1 92 148-243 54-165 (247)
498 PRK07074 short chain dehydroge 91.2 0.57 1.2E-05 39.6 6.0 41 151-192 2-42 (257)
499 PRK07832 short chain dehydroge 91.1 0.52 1.1E-05 40.4 5.8 39 153-192 2-40 (272)
500 PRK12938 acetyacetyl-CoA reduc 91.1 0.82 1.8E-05 38.3 6.9 34 150-184 2-35 (246)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=3.1e-54 Score=369.78 Aligned_cols=299 Identities=34% Similarity=0.504 Sum_probs=259.7
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||+++.+++++ ++|. |++.|+|+++||+|++.|+|+||+|+|.++|.++. ..+|.++|||.+|+|+++|++|+
T Consensus 4 mkA~~~~~~~~p---l~i~-e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~--~~~P~ipGHEivG~V~~vG~~V~ 77 (339)
T COG1064 4 MKAAVLKKFGQP---LEIE-EVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPV--PKLPLIPGHEIVGTVVEVGEGVT 77 (339)
T ss_pred eEEEEEccCCCC---ceEE-eccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCC--CCCCccCCcceEEEEEEecCCCc
Confidence 899999999997 7999 99999999999999999999999999999999854 45999999999999999999999
Q ss_pred CCCCCCeeEe-ec-C-----------------ccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628 81 KFKVGDEVYG-DI-N-----------------EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (310)
Q Consensus 81 ~~~~Gd~V~~-~~-~-----------------~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 141 (310)
+|++||||.. .. . .....+...+|+|+||+++|..+++++|++++++.||.+.|+..|+|+
T Consensus 78 ~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~ 157 (339)
T COG1064 78 GLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYR 157 (339)
T ss_pred cCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEee
Confidence 9999999976 11 0 111123336899999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc-cCCCccEEEe
Q 021628 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-LPEKFDVVFD 220 (310)
Q Consensus 142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~dvvi~ 220 (310)
+++..+++||++|+|+| .|++|.+|+|+|+++ |++|++++++++|++.++++|++++++..+++..+ ..+.+|++||
T Consensus 158 alk~~~~~pG~~V~I~G-~GGlGh~avQ~Aka~-ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~~d~ii~ 235 (339)
T COG1064 158 ALKKANVKPGKWVAVVG-AGGLGHMAVQYAKAM-GAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAIID 235 (339)
T ss_pred ehhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhhCcEEEE
Confidence 99999999999999999 789999999999997 89999999999999999999999999876444333 2234999999
Q ss_pred CCC--ChHHHHhhcccCCEEEEEeCCC-CC-Cce---EE---------EEecCHHHHHHHHHHHHcCCeeEEecCCcccc
Q 021628 221 AVG--QCDKALKAVKEGGRVVSIIGSV-TP-PAS---SF---------VLTSDGSILEKLNPYFESGKVKAIIDPKGPFP 284 (310)
Q Consensus 221 ~~g--~~~~~~~~l~~~G~~v~~g~~~-~~-~~~---~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (310)
+++ .++..++.|+++|+++.+|.+. .+ ..+ .+ .......+++++++|..+|++++.+. +.++
T Consensus 236 tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~Ikp~i~--e~~~ 313 (339)
T COG1064 236 TVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKIKPEIL--ETIP 313 (339)
T ss_pred CCChhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCceeeEE--eeEC
Confidence 998 3589999999999999999873 22 111 11 11224688999999999999999752 5899
Q ss_pred hhhHHHHHHHHHcCCCCccEEEEeC
Q 021628 285 FSQTLEAFSHLESSRATGKVVIHPI 309 (310)
Q Consensus 285 ~~~~~~a~~~~~~~~~~~k~vi~~~ 309 (310)
++|+++|++.|++++..||.||++.
T Consensus 314 l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 314 LDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred HHHHHHHHHHHHcCCeeeEEEecCC
Confidence 9999999999999999999999874
No 2
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=2.4e-46 Score=328.42 Aligned_cols=296 Identities=44% Similarity=0.618 Sum_probs=252.1
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
||++++.+++.+ +.++++ |.|.|+|++|||+||+.++++|+.|.....|.. ....++|+++|.|++|+|+++|++++
T Consensus 1 mka~~~~~~g~~-~~l~~~-e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~-~~~~~~P~i~G~d~aG~V~avG~~V~ 77 (326)
T COG0604 1 MKAVVVEEFGGP-EVLKVV-EVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLA-PPVRPLPFIPGSEAAGVVVAVGSGVT 77 (326)
T ss_pred CeEEEEeccCCC-ceeEEE-ecCCCCCCCCeEEEEEEEeecChHHHHhccCCC-CCCCCCCCcccceeEEEEEEeCCCCC
Confidence 999999999999 669999 999999999999999999999999999999872 23456899999999999999999999
Q ss_pred CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hcccCCCCEEEEEcC
Q 021628 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG 159 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g~ 159 (310)
.+++||+|+.... . ...|+|+||.++|.+.++++|+++++++||+++++++|||+++. ..++++|++|||+|+
T Consensus 78 ~~~~GdrV~~~~~-~-----~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~ga 151 (326)
T COG0604 78 GFKVGDRVAALGG-V-----GRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGA 151 (326)
T ss_pred CcCCCCEEEEccC-C-----CCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecC
Confidence 9999999999740 0 04799999999999999999999999999999999999999995 689999999999999
Q ss_pred CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccccc------CCCccEEEeCCCC--hHHHHhh
Q 021628 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALKA 231 (310)
Q Consensus 160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~dvvi~~~g~--~~~~~~~ 231 (310)
+|++|.+++|+||.+ |+.+++++.++++.++++++|+++++++.++++.+. .+++|+|||+.|. +...+++
T Consensus 152 aGgVG~~aiQlAk~~-G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~ 230 (326)
T COG0604 152 AGGVGSAAIQLAKAL-GATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAA 230 (326)
T ss_pred CchHHHHHHHHHHHc-CCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHH
Confidence 999999999999996 878888888888888999999999999887766443 2379999999984 5789999
Q ss_pred cccCCEEEEEeCCCC-CC-----------ceEE---EEecC-----HHHHHHHHHHHHcCCeeEEecCCcccchhhHHHH
Q 021628 232 VKEGGRVVSIIGSVT-PP-----------ASSF---VLTSD-----GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEA 291 (310)
Q Consensus 232 l~~~G~~v~~g~~~~-~~-----------~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 291 (310)
|+++|+++.+|.... .. .+.. ..... .+.+.++.+++.+|.+++.+ ..+|+++|..++
T Consensus 231 l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i--~~~~~l~e~~~a 308 (326)
T COG0604 231 LAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVI--DRVYPLAEAPAA 308 (326)
T ss_pred hccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCccee--ccEechhhhHHH
Confidence 999999999987541 11 0110 11112 45678899999999999975 389999997666
Q ss_pred HHHHHc-CCCCccEEEEe
Q 021628 292 FSHLES-SRATGKVVIHP 308 (310)
Q Consensus 292 ~~~~~~-~~~~~k~vi~~ 308 (310)
...... ++..||+++++
T Consensus 309 ~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 309 AAHLLLERRTTGKVVLKV 326 (326)
T ss_pred HHHHHcccCCcceEEEeC
Confidence 665444 48889999874
No 3
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=2.9e-47 Score=320.05 Aligned_cols=298 Identities=27% Similarity=0.359 Sum_probs=255.1
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
+||++..++++| |+|+ |++.++|++|||+||+.++|+||+|+...+|..| ..+|.++|||+.|+|+++|++|.
T Consensus 3 ~~aAV~~~~~~P---l~i~-ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p---~~~P~vLGHEgAGiVe~VG~gVt 75 (366)
T COG1062 3 TRAAVAREAGKP---LEIE-EVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDP---EGFPAVLGHEGAGIVEAVGEGVT 75 (366)
T ss_pred ceEeeeecCCCC---eEEE-EEecCCCCCCeEEEEEEEeeccccchhhhcCCCC---CCCceecccccccEEEEecCCcc
Confidence 689999999999 9999 9999999999999999999999999999999874 44899999999999999999999
Q ss_pred CCCCCCeeEeecCc--------------------------------cccC-------CCCCCCcceeEEEEecCccccCC
Q 021628 81 KFKVGDEVYGDINE--------------------------------KALD-------HPKRNGSLAEYTAVEENLLALKP 121 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~--------------------------------~~~~-------~~~~~g~~~~~~~~~~~~~~~ip 121 (310)
++++||+|+..+.. .+++ ..-.-++|++|.+++..++++++
T Consensus 76 ~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~ 155 (366)
T COG1062 76 SVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKID 155 (366)
T ss_pred ccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECC
Confidence 99999999876430 0000 00112499999999999999999
Q ss_pred CCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCE
Q 021628 122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADL 199 (310)
Q Consensus 122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~ 199 (310)
++.+++.++++.|+.+|.+.++ +.+++++|++|.|+| .|++|++++|-|+.. |+ ++|+++.+++|++++++||+++
T Consensus 156 ~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~G-lGgVGlaaI~gA~~a-gA~~IiAvD~~~~Kl~~A~~fGAT~ 233 (366)
T COG1062 156 PDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAA-GAGRIIAVDINPEKLELAKKFGATH 233 (366)
T ss_pred CCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEe-ccHhHHHHHHHHHHc-CCceEEEEeCCHHHHHHHHhcCCce
Confidence 9999999999999999999987 799999999999999 999999999999996 76 6778888999999999999999
Q ss_pred EeeCCCCc-cc----ccC-CCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCc-----eEEEE-----ec----
Q 021628 200 AIDYTKEN-IE----DLP-EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA-----SSFVL-----TS---- 256 (310)
Q Consensus 200 ~~~~~~~~-~~----~~~-~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~-----~~~~~-----~~---- 256 (310)
++|+.+.. .. +.. .|+|.+|||+|+ ++.+++++.++|+.+..|....... +++.. .+
T Consensus 234 ~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~ 313 (366)
T COG1062 234 FVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGG 313 (366)
T ss_pred eecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeeccceEEEEeecC
Confidence 99987653 22 223 399999999996 5899999999999999987652221 11211 00
Q ss_pred --CHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 257 --DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 257 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
-..++..+++++.+|++....++++.++|+|+||||+.|.+++.. |.||.|
T Consensus 314 ~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~~ 366 (366)
T COG1062 314 ARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIRF 366 (366)
T ss_pred CccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEecC
Confidence 146799999999999999998999999999999999999999987 777654
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.9e-46 Score=310.62 Aligned_cols=301 Identities=27% Similarity=0.367 Sum_probs=248.1
Q ss_pred CEEEEEcccCCCccceEEeccccCCCC-CCCcEEEEEeEeecCHHHHHHHhCCCC-CCCCCCCcccccceeEEEEEeCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFS-ATDSPLPTIPGYDVAGVVEKVGSQ 78 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~-~~~~~~p~~~G~e~~G~V~~~g~~ 78 (310)
|+|+++.++++. +|+ +.|.|++ .|+||+|++.++|||.||+|++..... ...-+.|.++|||.+|+|+++|++
T Consensus 5 ~~A~vl~g~~di----~i~-~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~ 79 (354)
T KOG0024|consen 5 NLALVLRGKGDI----RIE-QRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDE 79 (354)
T ss_pred cceeEEEccCce----eEe-eCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccc
Confidence 789999999997 999 8999988 999999999999999999999976432 122357999999999999999999
Q ss_pred CCCCCCCCeeEeecC------------------ccc-cCCCCCCCcceeEEEEecCccccCCCCCChhhhccc-cchHHH
Q 021628 79 VKKFKVGDEVYGDIN------------------EKA-LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATET 138 (310)
Q Consensus 79 ~~~~~~Gd~V~~~~~------------------~~~-~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~~~~~t 138 (310)
|.++++||||..-+. +.. ...+..+|++++|++.+.+.|+++|++++++++|++ |+ +.
T Consensus 80 Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~ePL--sV 157 (354)
T KOG0024|consen 80 VKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEPL--SV 157 (354)
T ss_pred ccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccch--hh
Confidence 999999999976542 111 123345799999999999999999999999999999 64 45
Q ss_pred HHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCc-ccc---c--
Q 021628 139 AYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKEN-IED---L-- 211 (310)
Q Consensus 139 a~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~---~-- 211 (310)
++||.+.+++++|++|||+| +|++|+++...||++ |+ +|++++-.+.|++.++++|++.+.+....+ ..+ .
T Consensus 158 ~~HAcr~~~vk~Gs~vLV~G-AGPIGl~t~l~Aka~-GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~ 235 (354)
T KOG0024|consen 158 GVHACRRAGVKKGSKVLVLG-AGPIGLLTGLVAKAM-GASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVE 235 (354)
T ss_pred hhhhhhhcCcccCCeEEEEC-CcHHHHHHHHHHHHc-CCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHH
Confidence 99999999999999999999 999999999999997 75 777888899999999999999887655433 211 1
Q ss_pred -C---CCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC----------ceEE--EEecCHHHHHHHHHHHHcCC
Q 021628 212 -P---EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSF--VLTSDGSILEKLNPYFESGK 272 (310)
Q Consensus 212 -~---~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~--~~~~~~~~~~~~~~~~~~~~ 272 (310)
. ..+|++|||+|. .+.++..++.+|.+++++.-.... ..++ .+.....++..+++++++|+
T Consensus 236 ~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li~sGk 315 (354)
T KOG0024|consen 236 KALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELVSSGK 315 (354)
T ss_pred hhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHHHcCC
Confidence 1 249999999993 589999999999988887432211 1111 12223457999999999999
Q ss_pred eeEEecCCcccchhhHHHHHHHHHcCCC-CccEEEEeCC
Q 021628 273 VKAIIDPKGPFPFSQTLEAFSHLESSRA-TGKVVIHPIP 310 (310)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~k~vi~~~~ 310 (310)
++...++|+.|+++++.+||+.+..++. .-|+++...+
T Consensus 316 i~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 316 IDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred cCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 9998899999999999999999988773 3488887654
No 5
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.8e-45 Score=303.92 Aligned_cols=299 Identities=27% Similarity=0.384 Sum_probs=246.0
Q ss_pred EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (310)
Q Consensus 2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~ 81 (310)
++|.+.+++.. ..+++. +++.|+++++||+|++.|+|+||+|+|.+.|.++. .++|.++|||++|+|+++|+++++
T Consensus 11 ~g~~~~~~~G~-l~p~~~-~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~--s~~PlV~GHEiaG~VvkvGs~V~~ 86 (360)
T KOG0023|consen 11 FGWAARDPSGV-LSPEVF-SFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL--SKYPLVPGHEIAGVVVKVGSNVTG 86 (360)
T ss_pred EEEEEECCCCC-CCccee-EcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc--ccCCccCCceeeEEEEEECCCccc
Confidence 57888888876 556778 89999999999999999999999999999998853 789999999999999999999999
Q ss_pred CCCCCeeEee-------------------cC--ccccCCCCCC-----CcceeEEEEecCccccCCCCCChhhhccccch
Q 021628 82 FKVGDEVYGD-------------------IN--EKALDHPKRN-----GSLAEYTAVEENLLALKPKNLSFVEAASLPLA 135 (310)
Q Consensus 82 ~~~Gd~V~~~-------------------~~--~~~~~~~~~~-----g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~ 135 (310)
|++||||-.= ++ ..+++++..+ |+|++|++++...+++||++++.+.||.+.|+
T Consensus 87 ~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCa 166 (360)
T KOG0023|consen 87 FKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCA 166 (360)
T ss_pred ccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhc
Confidence 9999998321 11 2333444444 55999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh-hhHHHHHHcCCCEEeeCC-CCcccc-c-
Q 021628 136 TETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDLLRSLGADLAIDYT-KENIED-L- 211 (310)
Q Consensus 136 ~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~-~~~~~~~~~g~~~~~~~~-~~~~~~-~- 211 (310)
..|+|.+|+..++.||+++.|.| .|++|.+|+|+||++ |.+|++++++. +|.+.++.||++..++.. +++.-+ .
T Consensus 167 GITvYspLk~~g~~pG~~vgI~G-lGGLGh~aVq~AKAM-G~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~ 244 (360)
T KOG0023|consen 167 GITVYSPLKRSGLGPGKWVGIVG-LGGLGHMAVQYAKAM-GMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIM 244 (360)
T ss_pred ceEEeehhHHcCCCCCcEEEEec-CcccchHHHHHHHHh-CcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHH
Confidence 99999999999999999999999 555999999999998 99999999977 566666889999887765 444322 1
Q ss_pred ---CCCccEEEeCCC-ChHHHHhhcccCCEEEEEeCCCCCCceE---EEE------e---cCHHHHHHHHHHHHcCCeeE
Q 021628 212 ---PEKFDVVFDAVG-QCDKALKAVKEGGRVVSIIGSVTPPASS---FVL------T---SDGSILEKLNPYFESGKVKA 275 (310)
Q Consensus 212 ---~~~~dvvi~~~g-~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~------~---~~~~~~~~~~~~~~~~~~~~ 275 (310)
..++|-|.+.+- .++.+++.|+++|++|++|.+..+..++ +.+ . ....+.+++++|..++.++.
T Consensus 245 ~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ldf~a~~~ik~ 324 (360)
T KOG0023|consen 245 KTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEALDFVARGLIKS 324 (360)
T ss_pred HhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHHHHHHHcCCCcC
Confidence 223444444432 3588999999999999999876332221 111 1 13567899999999999998
Q ss_pred EecCCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628 276 IIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPI 309 (310)
Q Consensus 276 ~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~ 309 (310)
++ ...+++++++||+.|.++...+|.||++.
T Consensus 325 ~I---E~v~~~~v~~a~erm~kgdV~yRfVvD~s 355 (360)
T KOG0023|consen 325 PI---ELVKLSEVNEAYERMEKGDVRYRFVVDVS 355 (360)
T ss_pred ce---EEEehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence 75 57899999999999999999999998764
No 6
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.2e-43 Score=285.15 Aligned_cols=293 Identities=35% Similarity=0.476 Sum_probs=259.0
Q ss_pred EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (310)
Q Consensus 2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~ 81 (310)
|.++++++|.. +.++|+ +.|.|+|.++|+.||..|+|++..|.-...|.|. +...|+++|-|++|+|+++|+++++
T Consensus 10 k~i~v~e~Ggy-dvlk~e-d~pv~~papgel~iknka~GlNfid~y~RkGlY~--~~plPytpGmEaaGvVvAvG~gvtd 85 (336)
T KOG1197|consen 10 KCIVVTEFGGY-DVLKLE-DRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD--PAPLPYTPGMEAAGVVVAVGEGVTD 85 (336)
T ss_pred eEEEEeccCCc-ceEEEe-eecCCCCCCCceEEeehhcCccHHHHHHhccccC--CCCCCcCCCcccceEEEEecCCccc
Confidence 67899999999 999999 9999999999999999999999999999999883 5778999999999999999999999
Q ss_pred CCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCC
Q 021628 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGA 160 (310)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~ 160 (310)
+++||||....+ .|.|+++..+|...+.++|+.+++..||++.+.++|||.-+ +..+++||++||++.++
T Consensus 86 rkvGDrVayl~~---------~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAA 156 (336)
T KOG1197|consen 86 RKVGDRVAYLNP---------FGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAA 156 (336)
T ss_pred cccccEEEEecc---------chhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEecc
Confidence 999999988754 89999999999999999999999999999999999999888 57899999999999999
Q ss_pred cchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccccc------CCCccEEEeCCC--ChHHHHhhc
Q 021628 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVG--QCDKALKAV 232 (310)
Q Consensus 161 g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~dvvi~~~g--~~~~~~~~l 232 (310)
|++|++++|+++.. |+.+|.+..+.++.+.+++.|+.+.++++.+|+.+. .+|+|+++|..| .+...+.+|
T Consensus 157 GGVGlll~Ql~ra~-~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~L 235 (336)
T KOG1197|consen 157 GGVGLLLCQLLRAV-GAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAAL 235 (336)
T ss_pred ccHHHHHHHHHHhc-CcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeeccccchhhHHHHHHh
Confidence 99999999999996 999999999999999999999999999998886432 569999999998 468899999
Q ss_pred ccCCEEEEEeCCCCC-CceEE----------EEe-----cC--HH---HHHHHHHHHHcCCeeEEecCCcccchhhHHHH
Q 021628 233 KEGGRVVSIIGSVTP-PASSF----------VLT-----SD--GS---ILEKLNPYFESGKVKAIIDPKGPFPFSQTLEA 291 (310)
Q Consensus 233 ~~~G~~v~~g~~~~~-~~~~~----------~~~-----~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 291 (310)
++.|.++++|..... ..+++ ... .. .+ -..++..++.++.+++.+ .|+||++++.+|
T Consensus 236 k~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I--~~~ypls~vadA 313 (336)
T KOG1197|consen 236 KPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHI--DHVYPLSKVADA 313 (336)
T ss_pred ccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceee--eeecchHHHHHH
Confidence 999999999976421 11111 100 01 12 235677888899999875 589999999999
Q ss_pred HHHHHcCCCCccEEEEeCC
Q 021628 292 FSHLESSRATGKVVIHPIP 310 (310)
Q Consensus 292 ~~~~~~~~~~~k~vi~~~~ 310 (310)
..+++++++.||+++.+.|
T Consensus 314 ~~diesrktvGkvlLlp~~ 332 (336)
T KOG1197|consen 314 HADIESRKTVGKVLLLPGP 332 (336)
T ss_pred HHHHHhhhccceEEEeCCc
Confidence 9999999999999998765
No 7
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=9.2e-43 Score=310.49 Aligned_cols=299 Identities=29% Similarity=0.383 Sum_probs=246.2
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||+++.+++. ++++ +.|.|+++++||+||+.++++|++|++.+.+.+.. +..+|.++|||++|+|+++|+++.
T Consensus 1 mka~~~~~~~~----l~~~-~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~ 74 (339)
T cd08239 1 MRGAVFPGDRT----VELR-EFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRA-PAYQGVIPGHEPAGVVVAVGPGVT 74 (339)
T ss_pred CeEEEEecCCc----eEEE-ecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCc-cCCCCceeccCceEEEEEECCCCc
Confidence 99999997665 4999 89999999999999999999999999988776421 233578999999999999999999
Q ss_pred CCCCCCeeEeecCcccc-------------------CCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628 81 KFKVGDEVYGDINEKAL-------------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~-------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 141 (310)
++++||+|+..+..... .+....|+|++|+++|...++++|+++++++++.+++++.|||+
T Consensus 75 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~ 154 (339)
T cd08239 75 HFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYH 154 (339)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHH
Confidence 99999999876421000 12234699999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCccc---cc--CCCc
Q 021628 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIE---DL--PEKF 215 (310)
Q Consensus 142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~--~~~~ 215 (310)
++....+++|++|+|+| +|++|++++++|+.+ |++ |++++++++|++.++++|+++++++++++.. .. ..++
T Consensus 155 ~l~~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~-G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~ 232 (339)
T cd08239 155 ALRRVGVSGRDTVLVVG-AGPVGLGALMLARAL-GAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELTSGAGA 232 (339)
T ss_pred HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHHHHHHhCCCCC
Confidence 99878889999999998 699999999999996 998 8898899999999999999999887654311 11 2379
Q ss_pred cEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC----------ceEEE--EecCHHHHHHHHHHHHcCCeeEEecCC
Q 021628 216 DVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFV--LTSDGSILEKLNPYFESGKVKAIIDPK 280 (310)
Q Consensus 216 dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (310)
|++|||+|. ...++++++++|+++.+|...... ...+. .....++++++++++.++.+++...++
T Consensus 233 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~ 312 (339)
T cd08239 233 DVAIECSGNTAARRLALEAVRPWGRLVLVGEGGELTIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEVDRLVT 312 (339)
T ss_pred CEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCcccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCChhHeEE
Confidence 999999985 267899999999999998643211 01111 111346799999999999998755667
Q ss_pred cccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 281 GPFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 281 ~~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
++|+++++++|++.+.++. .||++|++
T Consensus 313 ~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 313 HRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred EEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 8999999999999988875 68999874
No 8
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=6.8e-43 Score=314.72 Aligned_cols=300 Identities=26% Similarity=0.319 Sum_probs=246.6
Q ss_pred CEEEEEcccCCC-----ccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEe
Q 021628 1 MKAWVYKEYGNS-----QSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKV 75 (310)
Q Consensus 1 mka~~~~~~g~~-----~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~ 75 (310)
|||+++.++|.+ .+.++++ +.|.|+++++||+||+.+++||++|++.+.|.++ ..+|.++|||++|+|+++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~-~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~---~~~p~i~GhE~~G~V~~v 76 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIE-EVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP---RPLPMALGHEAAGVVVEV 76 (371)
T ss_pred CcceEEEecccccccccCCCceEE-EeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC---CCCCccCCccceeEEEEe
Confidence 999999998853 2668999 9999999999999999999999999999988653 356899999999999999
Q ss_pred CCCCCCCCCCCeeEeecCcc-c----------cC----------C------------------CCCCCcceeEEEEecCc
Q 021628 76 GSQVKKFKVGDEVYGDINEK-A----------LD----------H------------------PKRNGSLAEYTAVEENL 116 (310)
Q Consensus 76 g~~~~~~~~Gd~V~~~~~~~-~----------~~----------~------------------~~~~g~~~~~~~~~~~~ 116 (310)
|++++++++||+|++.+... + .. + ....|+|++|+++|...
T Consensus 77 G~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~ 156 (371)
T cd08281 77 GEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRS 156 (371)
T ss_pred CCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccc
Confidence 99999999999998742100 0 00 0 00137999999999999
Q ss_pred cccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHH
Q 021628 117 LALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRS 194 (310)
Q Consensus 117 ~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~ 194 (310)
++++|+++++++++.+++++.|||+++ +.+.+++|++|+|+| +|++|++++++|+.+ |+ +|++++.+++|++.+++
T Consensus 157 ~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G-~G~vG~~a~~lak~~-G~~~Vi~~~~~~~r~~~a~~ 234 (371)
T cd08281 157 VVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVG-LGGVGLSALLGAVAA-GASQVVAVDLNEDKLALARE 234 (371)
T ss_pred eEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCcEEEEcCCHHHHHHHHH
Confidence 999999999999999999999999997 578899999999999 799999999999996 98 58888999999999999
Q ss_pred cCCCEEeeCCCCcccc-----cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCce------------EEEE
Q 021628 195 LGADLAIDYTKENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS------------SFVL 254 (310)
Q Consensus 195 ~g~~~~~~~~~~~~~~-----~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~------------~~~~ 254 (310)
+|+++++++.++++.+ ...++|++|||+|. ...++++++++|+++.+|........ .+..
T Consensus 235 ~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g 314 (371)
T cd08281 235 LGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKG 314 (371)
T ss_pred cCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEE
Confidence 9999998876554321 12379999999984 47889999999999999865321111 1111
Q ss_pred --ec---CHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEE
Q 021628 255 --TS---DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306 (310)
Q Consensus 255 --~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi 306 (310)
.. ...++.++++++.++++++...++++|+++|+++|++.+.+++..+|+++
T Consensus 315 ~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 315 SYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred EecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 01 13578899999999999876567899999999999999999988877653
No 9
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.7e-43 Score=290.77 Aligned_cols=299 Identities=25% Similarity=0.319 Sum_probs=254.1
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||++.+++++| |.|+ |+.+++|+..||+||+.++++||+|...+.|.. ....+|.++|||++|+|+.+|.+|.
T Consensus 8 CKAAV~w~a~~P---L~IE-ei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~--~~~~fP~IlGHEaaGIVESvGegV~ 81 (375)
T KOG0022|consen 8 CKAAVAWEAGKP---LVIE-EIEVAPPKAHEVRIKILATGVCHTDAYVWSGKD--PEGLFPVILGHEAAGIVESVGEGVT 81 (375)
T ss_pred EeEeeeccCCCC---eeEE-EEEeCCCCCceEEEEEEEEeeccccceeecCCC--ccccCceEecccceeEEEEecCCcc
Confidence 699999999999 9999 999999999999999999999999999999976 3467899999999999999999999
Q ss_pred CCCCCCeeEeecCc---------------------------cccC-------------CCCCCCcceeEEEEecCccccC
Q 021628 81 KFKVGDEVYGDINE---------------------------KALD-------------HPKRNGSLAEYTAVEENLLALK 120 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~---------------------------~~~~-------------~~~~~g~~~~~~~~~~~~~~~i 120 (310)
.+++||+|+..+.+ ..++ ++-...+|+||.+++...+.+|
T Consensus 82 ~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kI 161 (375)
T KOG0022|consen 82 TVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKI 161 (375)
T ss_pred ccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEec
Confidence 99999999865420 0000 1111249999999999999999
Q ss_pred CCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCC
Q 021628 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD 198 (310)
Q Consensus 121 p~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~ 198 (310)
++..+++.++++.|++.|+|.|. +.++++||+++.|+| -|++|+++++-|+.. |+ ++|.++.|++|.+.+++||++
T Consensus 162 d~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfG-LG~VGLav~~Gaka~-GAsrIIgvDiN~~Kf~~ak~fGaT 239 (375)
T KOG0022|consen 162 DPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFG-LGGVGLAVAMGAKAA-GASRIIGVDINPDKFEKAKEFGAT 239 (375)
T ss_pred CCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEe-cchHHHHHHHhHHhc-CcccEEEEecCHHHHHHHHhcCcc
Confidence 99999999999999999999998 799999999999999 999999999999996 65 788888899999999999999
Q ss_pred EEeeCCCCc--cc----cc-CCCccEEEeCCCC---hHHHHhhcccC-CEEEEEeCCCCCCceEE---------------
Q 021628 199 LAIDYTKEN--IE----DL-PEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPPASSF--------------- 252 (310)
Q Consensus 199 ~~~~~~~~~--~~----~~-~~~~dvvi~~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~~~~~--------------- 252 (310)
..+|+.+.. .. ++ ..|+|.-|||.|+ +++++.+...+ |.-+.+|.......++.
T Consensus 240 e~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~ 319 (375)
T KOG0022|consen 240 EFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSA 319 (375)
T ss_pred eecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEe
Confidence 999987321 11 11 3589999999996 47888888888 99999987653332221
Q ss_pred -EEecCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 253 -VLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 253 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
......+++..+++.+.++.+.....+||++||+++++||+.|.+++.. |.++.+
T Consensus 320 FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~~ 375 (375)
T KOG0022|consen 320 FGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLWM 375 (375)
T ss_pred cccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEeC
Confidence 1112357899999999999999988999999999999999999999987 888764
No 10
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=2.7e-42 Score=307.69 Aligned_cols=297 Identities=19% Similarity=0.277 Sum_probs=237.6
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHh-CCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRML-GAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~-g~~~~~~~~~p~~~G~e~~G~V~~~g~~~ 79 (310)
||++++.++++. +++ +.+.| ++++||+||+.+++||++|++.+. |.++.....+|.++|||++|+|+++ ++
T Consensus 5 ~~~~~~~~~~~~----~~~-~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v 76 (343)
T PRK09880 5 TQSCVVAGKKDV----AVT-EQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DS 76 (343)
T ss_pred ceEEEEecCCce----EEE-ecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cC
Confidence 689999988876 888 88887 689999999999999999999875 4332223457899999999999999 77
Q ss_pred CCCCCCCeeEeecCccc------------------cCC-----CCCCCcceeEEEEecCccccCCCCCChhhhccccchH
Q 021628 80 KKFKVGDEVYGDINEKA------------------LDH-----PKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLAT 136 (310)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~------------------~~~-----~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~ 136 (310)
.++++||+|+..+.... ..+ ...+|+|+||++++...++++|+++++++++ +...+
T Consensus 77 ~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~~ 155 (343)
T PRK09880 77 SGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEPL 155 (343)
T ss_pred ccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcHH
Confidence 88999999986431100 000 1236999999999999999999999987665 34466
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCccccc---C
Q 021628 137 ETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL---P 212 (310)
Q Consensus 137 ~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~ 212 (310)
.++|+++......+|++|+|+| +|++|++++|+|+.+ |+ +|++++++++|++.++++|+++++++.++++.+. .
T Consensus 156 ~~a~~al~~~~~~~g~~VlV~G-~G~vG~~aiqlak~~-G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~ 233 (343)
T PRK09880 156 AVAIHAAHQAGDLQGKRVFVSG-VGPIGCLIVAAVKTL-GAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEK 233 (343)
T ss_pred HHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccC
Confidence 7899999777777899999999 699999999999996 88 5888899999999999999999988766543322 2
Q ss_pred CCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCce----------EEEE-ecCHHHHHHHHHHHHcCCeeEEec
Q 021628 213 EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS----------SFVL-TSDGSILEKLNPYFESGKVKAIID 278 (310)
Q Consensus 213 ~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~----------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 278 (310)
.++|++|||+|. ...++++++++|+++.+|.......+ .+.. .....+++++++++.++++++...
T Consensus 234 g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~ 313 (343)
T PRK09880 234 GYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWLANGVINPLPL 313 (343)
T ss_pred CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeeccccHHHHHHHHHcCCCCchhh
Confidence 359999999984 47899999999999999864321111 1111 112357899999999999987556
Q ss_pred CCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 279 PKGPFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 279 ~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
++++|+++|+++|++.+.++...+|++|.+
T Consensus 314 i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 314 LSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred eEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 678999999999999998888789999864
No 11
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=4.2e-42 Score=308.24 Aligned_cols=297 Identities=22% Similarity=0.277 Sum_probs=244.8
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
||+++++++|++ ++++ +.|.|+++++||+||+.++++|++|++.+.|.++ ..+|.++|||++|+|+++|+++.
T Consensus 2 mka~~~~~~~~~---~~~~-~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~---~~~p~i~G~e~~G~V~~vG~~v~ 74 (358)
T TIGR03451 2 VRGVIARSKGAP---VELE-TIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN---DEFPFLLGHEAAGVVEAVGEGVT 74 (358)
T ss_pred cEEEEEccCCCC---CEEE-EEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc---ccCCcccccceEEEEEEeCCCCc
Confidence 999999999976 6888 9999999999999999999999999999988652 34688999999999999999999
Q ss_pred CCCCCCeeEeecCc-----------cccC---------------CC-----CCCCcceeEEEEecCccccCCCCCChhhh
Q 021628 81 KFKVGDEVYGDINE-----------KALD---------------HP-----KRNGSLAEYTAVEENLLALKPKNLSFVEA 129 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~-----------~~~~---------------~~-----~~~g~~~~~~~~~~~~~~~ip~~~~~~~a 129 (310)
++++||+|++.+.. .... +. ...|+|+||+.+|...++++|++++++++
T Consensus 75 ~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~a 154 (358)
T TIGR03451 75 DVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAA 154 (358)
T ss_pred ccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHh
Confidence 99999999863210 0000 00 12589999999999999999999999999
Q ss_pred ccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCc
Q 021628 130 ASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKEN 207 (310)
Q Consensus 130 a~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~ 207 (310)
+.+++++.++|+++ +.+.+++|++|+|+| +|++|++++|+|+.+ |++ |++++++++|++.++++|+++++++++++
T Consensus 155 a~l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~~~ak~~-G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~ 232 (358)
T TIGR03451 155 GLLGCGVMAGLGAAVNTGGVKRGDSVAVIG-CGGVGDAAIAGAALA-GASKIIAVDIDDRKLEWAREFGATHTVNSSGTD 232 (358)
T ss_pred hhhcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcC
Confidence 99999999999887 578899999999998 799999999999996 985 88888999999999999999988876544
Q ss_pred ccc----c--CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC------------ceEEEEe-----cCHHHH
Q 021628 208 IED----L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP------------ASSFVLT-----SDGSIL 261 (310)
Q Consensus 208 ~~~----~--~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~------------~~~~~~~-----~~~~~~ 261 (310)
..+ . ..++|++|||+|+ ...++++++++|+++.+|...... ...+... .....+
T Consensus 233 ~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 312 (358)
T TIGR03451 233 PVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDF 312 (358)
T ss_pred HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHH
Confidence 321 1 2479999999984 478899999999999998653211 1111111 024578
Q ss_pred HHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628 262 EKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH 307 (310)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~ 307 (310)
+++++++.++++++...++++|+++|+++|++.+.+++.. |+++.
T Consensus 313 ~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 313 PMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred HHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 8899999999998755567899999999999999888776 77765
No 12
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=8.3e-42 Score=307.15 Aligned_cols=299 Identities=26% Similarity=0.320 Sum_probs=243.9
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
||++++...++. ++++ +.|.|+++++||+||+.++++|++|++.+.|.++ ...+|.++|||++|+|+++|++++
T Consensus 2 ~~a~~~~~~~~~---l~~~-~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~--~~~~p~i~GhE~~G~V~~vG~~v~ 75 (368)
T TIGR02818 2 SRAAVAWAAGQP---LKIE-EVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADP--EGVFPVILGHEGAGIVEAVGEGVT 75 (368)
T ss_pred ceEEEEecCCCC---eEEE-EecCCCCCCCeEEEEEEEecccHHHHHHhcCCCC--CCCCCeeeccccEEEEEEECCCCc
Confidence 899999988765 7888 8999999999999999999999999999988763 235789999999999999999999
Q ss_pred CCCCCCeeEeecCccc------------------------cC----------C-----CCCCCcceeEEEEecCccccCC
Q 021628 81 KFKVGDEVYGDINEKA------------------------LD----------H-----PKRNGSLAEYTAVEENLLALKP 121 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~------------------------~~----------~-----~~~~g~~~~~~~~~~~~~~~ip 121 (310)
++++||||+..+.... .. + ....|+|+||+++|.+.++++|
T Consensus 76 ~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP 155 (368)
T TIGR02818 76 SVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKIN 155 (368)
T ss_pred cCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECC
Confidence 9999999987532100 00 0 0013799999999999999999
Q ss_pred CCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCE
Q 021628 122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADL 199 (310)
Q Consensus 122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~ 199 (310)
+++++++++.+++++.|||+++ +.+++++|++|+|+| +|++|++++|+|+.+ |+ +|++++.+++|++.++++|++.
T Consensus 156 ~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~iG~~a~q~Ak~~-G~~~Vi~~~~~~~~~~~a~~~Ga~~ 233 (368)
T TIGR02818 156 PAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFG-LGGIGLSVIQGARMA-KASRIIAIDINPAKFELAKKLGATD 233 (368)
T ss_pred CCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCCe
Confidence 9999999999999999999998 578999999999998 799999999999996 88 7889999999999999999999
Q ss_pred EeeCCC--Ccccc-----cCCCccEEEeCCCC---hHHHHhhcccC-CEEEEEeCCCCC--C---ceE-----EEEe---
Q 021628 200 AIDYTK--ENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTP--P---ASS-----FVLT--- 255 (310)
Q Consensus 200 ~~~~~~--~~~~~-----~~~~~dvvi~~~g~---~~~~~~~l~~~-G~~v~~g~~~~~--~---~~~-----~~~~--- 255 (310)
+++..+ +++.. ...++|++|||+|. ...++++++++ |+++.+|..... . .+. ....
T Consensus 234 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~ 313 (368)
T TIGR02818 234 CVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAF 313 (368)
T ss_pred EEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeec
Confidence 887653 22111 12379999999984 47889999886 999999864211 0 010 0011
Q ss_pred ---cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 256 ---SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 256 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
....++.++++++.++++++...++++|+++|+++|++.+.+++. .|++|++
T Consensus 314 ~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 314 GGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred cCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 123568899999999999865567899999999999999987765 5988875
No 13
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.6e-41 Score=306.60 Aligned_cols=300 Identities=24% Similarity=0.317 Sum_probs=244.5
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
||++++.++++. ++++ +.|.|+++++||+||+.++++|++|++.+.|.++. ...+|.++|||++|+|+++|++++
T Consensus 11 mka~~~~~~~~~---~~~~-e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~-~~~~p~i~GhE~~G~V~~vG~~v~ 85 (381)
T PLN02740 11 CKAAVAWGPGEP---LVME-EIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEA-QRAYPRILGHEAAGIVESVGEGVE 85 (381)
T ss_pred eEEEEEecCCCC---cEEE-EeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcc-cCCCCccccccceEEEEEeCCCCC
Confidence 899999998865 5788 89999999999999999999999999999886531 235789999999999999999999
Q ss_pred CCCCCCeeEeecCccc------------------c---------CC---------------CCCCCcceeEEEEecCccc
Q 021628 81 KFKVGDEVYGDINEKA------------------L---------DH---------------PKRNGSLAEYTAVEENLLA 118 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~------------------~---------~~---------------~~~~g~~~~~~~~~~~~~~ 118 (310)
++++||+|++.+.... . .+ ....|+|+||+++|.+.++
T Consensus 86 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~ 165 (381)
T PLN02740 86 DLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVV 165 (381)
T ss_pred cCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeE
Confidence 9999999987542100 0 00 0025899999999999999
Q ss_pred cCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcC
Q 021628 119 LKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLG 196 (310)
Q Consensus 119 ~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g 196 (310)
++|++++.++++.+++++.|||+++ +.+++++|++|+|+| +|++|++++++|+.+ |+ +|++++++++|++.++++|
T Consensus 166 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~G~vG~~a~q~ak~~-G~~~Vi~~~~~~~r~~~a~~~G 243 (381)
T PLN02740 166 KIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFG-LGAVGLAVAEGARAR-GASKIIGVDINPEKFEKGKEMG 243 (381)
T ss_pred ECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCCcEEEEcCChHHHHHHHHcC
Confidence 9999999999999999999999987 578999999999999 799999999999996 88 5889999999999999999
Q ss_pred CCEEeeCCCCc--ccc----c-CCCccEEEeCCCC---hHHHHhhcccC-CEEEEEeCCCCCC-----------ceEEEE
Q 021628 197 ADLAIDYTKEN--IED----L-PEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPP-----------ASSFVL 254 (310)
Q Consensus 197 ~~~~~~~~~~~--~~~----~-~~~~dvvi~~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~-----------~~~~~~ 254 (310)
++.+++.++.+ +.+ . ..++|++||++|. ...++++++++ |+++.+|....+. ...+..
T Consensus 244 a~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g 323 (381)
T PLN02740 244 ITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITG 323 (381)
T ss_pred CcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEE
Confidence 99888865432 211 1 2379999999984 47888999996 9999998653211 111111
Q ss_pred --e-c--CHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 255 --T-S--DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 255 --~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
. . ....+.++++++.++.+++...++++|+++|+++|++.+.+++.. |++|++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~-k~~~~~ 381 (381)
T PLN02740 324 SVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKAL-RCLLHL 381 (381)
T ss_pred EecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCce-eEEEeC
Confidence 1 1 135688999999999988755668999999999999999888764 888863
No 14
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=6.4e-41 Score=296.89 Aligned_cols=292 Identities=24% Similarity=0.294 Sum_probs=239.3
Q ss_pred EEEEcccCCCc-cceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628 3 AWVYKEYGNSQ-SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (310)
Q Consensus 3 a~~~~~~g~~~-~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~ 81 (310)
|+.+.++|.+. ..++++ +.|.|+++++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|+++.+
T Consensus 1 ~~~~~~~g~~~~~~l~~~-~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~--~~~p~i~G~e~~G~V~~vG~~v~~ 77 (329)
T TIGR02822 1 AWEVERPGPIEDGPLRFV-ERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPV--HRPRVTPGHEVVGEVAGRGADAGG 77 (329)
T ss_pred CeeeecCCcCCCCCceEE-eCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCC--CCCCccCCcceEEEEEEECCCCcc
Confidence 35677776541 358999 99999999999999999999999999999887632 234789999999999999999999
Q ss_pred CCCCCeeEeecC-------------------ccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628 82 FKVGDEVYGDIN-------------------EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (310)
Q Consensus 82 ~~~Gd~V~~~~~-------------------~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (310)
+++||+|+..+. .....+...+|+|++|+.+|...++++|+++++++++.+++.+.|||++
T Consensus 78 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~ 157 (329)
T TIGR02822 78 FAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRA 157 (329)
T ss_pred cCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHH
Confidence 999999975321 0011122346999999999999999999999999999999999999999
Q ss_pred HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCC
Q 021628 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAV 222 (310)
Q Consensus 143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~ 222 (310)
+..+++++|++|+|+| +|++|++++|+|+.+ |++|++++++++|++.++++|++++++..+.. .+++|+++++.
T Consensus 158 ~~~~~~~~g~~VlV~G-~g~iG~~a~~~a~~~-G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~----~~~~d~~i~~~ 231 (329)
T TIGR02822 158 LLRASLPPGGRLGLYG-FGGSAHLTAQVALAQ-GATVHVMTRGAAARRLALALGAASAGGAYDTP----PEPLDAAILFA 231 (329)
T ss_pred HHhcCCCCCCEEEEEc-CCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHhCCceeccccccC----cccceEEEECC
Confidence 9778899999999999 599999999999996 99999999999999999999999988753221 24689989887
Q ss_pred CC---hHHHHhhcccCCEEEEEeCCC-CCCc----------eEEE--EecCHHHHHHHHHHHHcCCeeEEecCCcccchh
Q 021628 223 GQ---CDKALKAVKEGGRVVSIIGSV-TPPA----------SSFV--LTSDGSILEKLNPYFESGKVKAIIDPKGPFPFS 286 (310)
Q Consensus 223 g~---~~~~~~~l~~~G~~v~~g~~~-~~~~----------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (310)
+. ...++++++++|+++.+|... .... ..+. ......++.++++++.++++++. +++|+++
T Consensus 232 ~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~i---~~~~~l~ 308 (329)
T TIGR02822 232 PAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVRVT---THTYPLS 308 (329)
T ss_pred CcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCeeE---EEEEeHH
Confidence 63 578999999999999998642 1111 1111 11234678889999999999752 5899999
Q ss_pred hHHHHHHHHHcCCCCccEEE
Q 021628 287 QTLEAFSHLESSRATGKVVI 306 (310)
Q Consensus 287 ~~~~a~~~~~~~~~~~k~vi 306 (310)
|+++|++.+.+++..||++|
T Consensus 309 ~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 309 EADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred HHHHHHHHHHcCCCceEEEe
Confidence 99999999999999999987
No 15
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=5.4e-41 Score=300.77 Aligned_cols=299 Identities=22% Similarity=0.314 Sum_probs=236.7
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
||++.+...+.. +.+++. +.+.|.++++||+||+.++++|++|++.+.|.++ ...+|.++|||++|+|+++|++++
T Consensus 11 ~~~~~~~~~~~~-~~l~~~-~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~--~~~~p~i~GhE~~G~V~~vG~~v~ 86 (360)
T PLN02586 11 QKAFGWAARDPS-GVLSPF-HFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWG--FTRYPIVPGHEIVGIVTKLGKNVK 86 (360)
T ss_pred hheeEEEecCCC-CCceEE-eecCCCCCCCeEEEEEEEecCChhhHhhhcCCcC--CCCCCccCCcceeEEEEEECCCCC
Confidence 555555544444 447888 8899999999999999999999999999988653 235689999999999999999999
Q ss_pred CCCCCCeeEeecC----c--------cc-------c-------CCCCCCCcceeEEEEecCccccCCCCCChhhhccccc
Q 021628 81 KFKVGDEVYGDIN----E--------KA-------L-------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPL 134 (310)
Q Consensus 81 ~~~~Gd~V~~~~~----~--------~~-------~-------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~ 134 (310)
++++||+|+..+. + .. . .+...+|+|+||+++|.+.++++|+++++++++.+++
T Consensus 87 ~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~ 166 (360)
T PLN02586 87 KFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLC 166 (360)
T ss_pred ccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhc
Confidence 9999999974211 0 00 0 0122369999999999999999999999999999999
Q ss_pred hHHHHHHHHH-hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh-HHHHHHcCCCEEeeCCCC-ccccc
Q 021628 135 ATETAYEGLE-RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDLLRSLGADLAIDYTKE-NIEDL 211 (310)
Q Consensus 135 ~~~ta~~al~-~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~-~~~~~~~g~~~~~~~~~~-~~~~~ 211 (310)
++.|+|+++. ....++|++|+|.| +|++|++++|+|+.+ |+++++++.++++ .+.++++|++++++..+. .....
T Consensus 167 ~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~-Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~ 244 (360)
T PLN02586 167 AGITVYSPMKYYGMTEPGKHLGVAG-LGGLGHVAVKIGKAF-GLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAA 244 (360)
T ss_pred chHHHHHHHHHhcccCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHhh
Confidence 9999999985 45678999999988 799999999999996 9998888776665 455578999988876442 22222
Q ss_pred CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCceE---------EEEe---cCHHHHHHHHHHHHcCCeeEE
Q 021628 212 PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS---------FVLT---SDGSILEKLNPYFESGKVKAI 276 (310)
Q Consensus 212 ~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~---------~~~~---~~~~~~~~~~~~~~~~~~~~~ 276 (310)
..++|+|||++|. +..++++++++|+++.+|....+..++ .... ....+++++++++.+|++++.
T Consensus 245 ~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~ 324 (360)
T PLN02586 245 IGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIKETQEMLDFCAKHNITAD 324 (360)
T ss_pred cCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHHHHHHHHHHHHhCCCCCc
Confidence 3479999999984 467999999999999998543111110 1111 124678999999999999865
Q ss_pred ecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 277 IDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 277 ~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
+ ++|+++|+++|++.+.+++..||+++++
T Consensus 325 ~---~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 325 I---ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred E---EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 3 5799999999999999999889999876
No 16
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=8.8e-41 Score=300.70 Aligned_cols=298 Identities=27% Similarity=0.340 Sum_probs=242.8
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
||++++.+.++. ++++ +.|.|+++++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 3 ~~a~~~~~~~~~---~~~~-~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~--~~~p~v~G~E~~G~V~~vG~~v~ 76 (368)
T cd08300 3 CKAAVAWEAGKP---LSIE-EVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPE--GLFPVILGHEGAGIVESVGEGVT 76 (368)
T ss_pred ceEEEEecCCCC---cEEE-EeecCCCCCCEEEEEEEEEEechhhHHHhcCCCcc--CCCCceeccceeEEEEEeCCCCc
Confidence 899999888765 7888 89999999999999999999999999999887642 35789999999999999999999
Q ss_pred CCCCCCeeEeecCcc-----------ccC----------------------------CCCCCCcceeEEEEecCccccCC
Q 021628 81 KFKVGDEVYGDINEK-----------ALD----------------------------HPKRNGSLAEYTAVEENLLALKP 121 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~-----------~~~----------------------------~~~~~g~~~~~~~~~~~~~~~ip 121 (310)
++++||+|+..+... ... .....|+|++|+.++...++++|
T Consensus 77 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP 156 (368)
T cd08300 77 SVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKIN 156 (368)
T ss_pred cCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCC
Confidence 999999998752100 000 00024699999999999999999
Q ss_pred CCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCE
Q 021628 122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADL 199 (310)
Q Consensus 122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~ 199 (310)
+++++++++.+++++.|||+++ +...+++|++|+|+| +|++|++++++|+.+ |+ +|+++++++++++.++++|+++
T Consensus 157 ~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~vG~~a~~~ak~~-G~~~vi~~~~~~~~~~~~~~lGa~~ 234 (368)
T cd08300 157 PEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFG-LGAVGLAVIQGAKAA-GASRIIGIDINPDKFELAKKFGATD 234 (368)
T ss_pred CCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCCE
Confidence 9999999999999999999987 568899999999998 799999999999996 98 6889999999999999999999
Q ss_pred EeeCCCC--cccc-----cCCCccEEEeCCCC---hHHHHhhcccC-CEEEEEeCCCCCC-----c--e----EE---EE
Q 021628 200 AIDYTKE--NIED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPP-----A--S----SF---VL 254 (310)
Q Consensus 200 ~~~~~~~--~~~~-----~~~~~dvvi~~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~-----~--~----~~---~~ 254 (310)
++++.+. ++.. ...++|+|||++|. ...++++++++ |+++.+|...... . + .+ ..
T Consensus 235 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~ 314 (368)
T cd08300 235 CVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAF 314 (368)
T ss_pred EEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEe
Confidence 9887543 2211 12379999999984 47889999886 9999998652110 0 0 00 01
Q ss_pred --ecCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628 255 --TSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH 307 (310)
Q Consensus 255 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~ 307 (310)
.....++.++++++.++++++...++++|+++|+++|++.+.+++. .|++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 315 GGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred cccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 1124678899999999999875566899999999999999988775 488774
No 17
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=1.4e-40 Score=292.16 Aligned_cols=289 Identities=18% Similarity=0.207 Sum_probs=224.8
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecC-HHHHHHHhCCCCCCC-CCCCcccccceeEEEEEeCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALN-PIDFKRMLGAFSATD-SPLPTIPGYDVAGVVEKVGSQ 78 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~-~~d~~~~~g~~~~~~-~~~p~~~G~e~~G~V~~~g~~ 78 (310)
||++++.++++ ++++ +.|.|++++|||+||+.+++|| ++|++.+.|.++..+ ..+|.++|||++|+|+++|++
T Consensus 2 ~ka~~~~~~~~----l~~~-e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~ 76 (308)
T TIGR01202 2 TQAIVLSGPNQ----IELR-EVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPD 76 (308)
T ss_pred ceEEEEeCCCe----EEEE-EecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCC
Confidence 79999987665 5898 8999999999999999999995 799998888764322 367999999999999999999
Q ss_pred CCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEc
Q 021628 79 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLG 158 (310)
Q Consensus 79 ~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g 158 (310)
+ ++++||||+...........+..|+|+||+.+|.+.++++|++++++. +.+. .+.+||++++... .++++|+|+|
T Consensus 77 v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~~~-~~~~~vlV~G 152 (308)
T TIGR01202 77 T-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAGAE-VKVLPDLIVG 152 (308)
T ss_pred C-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHhcc-cCCCcEEEEC
Confidence 8 699999998743211111112369999999999999999999999864 4444 4679999996543 4689999998
Q ss_pred CCcchHHHHHHHHHhhcCCcEE-EEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC---hHHHHhhccc
Q 021628 159 GAGGVGTMVIQLAKHVFGASKV-AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---CDKALKAVKE 234 (310)
Q Consensus 159 ~~g~~G~~a~~la~~~~g~~vi-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---~~~~~~~l~~ 234 (310)
+|++|++++|+|+.+ |++++ +++.+++|++.+.++ .++++.+. ...++|+||||+|+ +..+++++++
T Consensus 153 -~G~vG~~a~q~ak~~-G~~~v~~~~~~~~rl~~a~~~---~~i~~~~~----~~~g~Dvvid~~G~~~~~~~~~~~l~~ 223 (308)
T TIGR01202 153 -HGTLGRLLARLTKAA-GGSPPAVWETNPRRRDGATGY---EVLDPEKD----PRRDYRAIYDASGDPSLIDTLVRRLAK 223 (308)
T ss_pred -CCHHHHHHHHHHHHc-CCceEEEeCCCHHHHHhhhhc---cccChhhc----cCCCCCEEEECCCCHHHHHHHHHhhhc
Confidence 899999999999996 98755 455677777766543 34443221 23579999999985 4788999999
Q ss_pred CCEEEEEeCCCCCCce----------EEEE--ecCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCc
Q 021628 235 GGRVVSIIGSVTPPAS----------SFVL--TSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATG 302 (310)
Q Consensus 235 ~G~~v~~g~~~~~~~~----------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 302 (310)
+|+++.+|....+..+ .+.. .....++++++++++++++++...+++.|+++|+++|++.+.++...+
T Consensus 224 ~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~ 303 (308)
T TIGR01202 224 GGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCL 303 (308)
T ss_pred CcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCce
Confidence 9999999865322111 1111 113467999999999999988666789999999999999987776678
Q ss_pred cEEEE
Q 021628 303 KVVIH 307 (310)
Q Consensus 303 k~vi~ 307 (310)
|++|+
T Consensus 304 Kv~~~ 308 (308)
T TIGR01202 304 KMILD 308 (308)
T ss_pred EEEeC
Confidence 98874
No 18
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=3.5e-40 Score=297.91 Aligned_cols=298 Identities=22% Similarity=0.276 Sum_probs=230.2
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCC-------CCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEE
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLR-------EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVE 73 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~-------~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~ 73 (310)
|||+++.++++. +++ ++|.|+++ +|||+||+.++|||++|++.+.|.++ ..+|.++|||++|+|+
T Consensus 3 mka~v~~~~~~~----~~~-e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~---~~~p~i~GhE~~G~V~ 74 (393)
T TIGR02819 3 NRGVVYLGPGKV----EVQ-DIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT---APTGLVLGHEITGEVI 74 (393)
T ss_pred ceEEEEecCCce----eEE-eccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC---CCCCccccceeEEEEE
Confidence 999999988865 888 89998874 68999999999999999999988642 3568999999999999
Q ss_pred EeCCCCCCCCCCCeeEeecCc------------------cc------cCCC----CCCCcceeEEEEecC--ccccCCCC
Q 021628 74 KVGSQVKKFKVGDEVYGDINE------------------KA------LDHP----KRNGSLAEYTAVEEN--LLALKPKN 123 (310)
Q Consensus 74 ~~g~~~~~~~~Gd~V~~~~~~------------------~~------~~~~----~~~g~~~~~~~~~~~--~~~~ip~~ 123 (310)
++|+++.++++||||...+.. .. ..+. ...|+|+||+++|.. .++++|++
T Consensus 75 ~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~ 154 (393)
T TIGR02819 75 EKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDR 154 (393)
T ss_pred EEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCc
Confidence 999999999999999764210 00 0000 135999999999964 79999998
Q ss_pred CCh----hhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEE-ecChhhHHHHHHcCCC
Q 021628 124 LSF----VEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLLRSLGAD 198 (310)
Q Consensus 124 ~~~----~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~-~~~~~~~~~~~~~g~~ 198 (310)
++. ..++.+.+.+.++|+++...++++|++|+|.| +|++|++++++|+.+ |++++++ +++++|++.++++|++
T Consensus 155 ~~~~~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G-~G~iG~~aiqlAk~~-Ga~~vi~~d~~~~r~~~a~~~Ga~ 232 (393)
T TIGR02819 155 DQALEKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAG-AGPVGLAAAASAQLL-GAAVVIVGDLNPARLAQARSFGCE 232 (393)
T ss_pred ccccccccceeeeccHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCceEEEeCCCHHHHHHHHHcCCe
Confidence 653 34667777888999999878899999999977 899999999999996 9876554 5688899999999997
Q ss_pred EEeeCCCCccc----cc--CCCccEEEeCCCC-----------------hHHHHhhcccCCEEEEEeCCCC-CC-c----
Q 021628 199 LAIDYTKENIE----DL--PEKFDVVFDAVGQ-----------------CDKALKAVKEGGRVVSIIGSVT-PP-A---- 249 (310)
Q Consensus 199 ~~~~~~~~~~~----~~--~~~~dvvi~~~g~-----------------~~~~~~~l~~~G~~v~~g~~~~-~~-~---- 249 (310)
.+....+.++. .. ..++|++||++|. +++++++++++|+++.+|.+.. .. .
T Consensus 233 ~v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~ 312 (393)
T TIGR02819 233 TVDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAA 312 (393)
T ss_pred EEecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCccccccccc
Confidence 54333322221 11 2479999999983 4788999999999999997521 11 0
Q ss_pred -----eEEEE------------e-cC-HHHHHHHHHHHHcCCeeEEecCC-cccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628 250 -----SSFVL------------T-SD-GSILEKLNPYFESGKVKAIIDPK-GPFPFSQTLEAFSHLESSRATGKVVIHPI 309 (310)
Q Consensus 250 -----~~~~~------------~-~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~k~vi~~~ 309 (310)
+++.. . .. ...+.++++++.++++++...++ ++|+++|+++||+.+.+++. +|++|+++
T Consensus 313 ~~~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~-~Kvvi~~~ 391 (393)
T TIGR02819 313 AKTGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAA-KKFVIDPH 391 (393)
T ss_pred ccccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCc-eEEEEeCC
Confidence 00100 0 01 12346789999999998754445 78999999999999988755 79999864
No 19
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=3e-40 Score=297.48 Aligned_cols=297 Identities=22% Similarity=0.270 Sum_probs=242.4
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||+++.++++. ++++ +.|.|+++++||+||+.++++|++|++.+.|..+ ...+|.++|||++|+|+++|+++.
T Consensus 3 ~ka~~~~~~~~~---~~l~-~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~--~~~~p~i~G~e~~G~V~~vG~~v~ 76 (369)
T cd08301 3 CKAAVAWEAGKP---LVIE-EVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQ--TPLFPRILGHEAAGIVESVGEGVT 76 (369)
T ss_pred cEEEEEecCCCC---cEEE-EeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCC--CCCCCcccccccceEEEEeCCCCC
Confidence 899999988765 7888 8999999999999999999999999999988753 346789999999999999999999
Q ss_pred CCCCCCeeEeecCccc------------------c-----------------CC-----CCCCCcceeEEEEecCccccC
Q 021628 81 KFKVGDEVYGDINEKA------------------L-----------------DH-----PKRNGSLAEYTAVEENLLALK 120 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~------------------~-----------------~~-----~~~~g~~~~~~~~~~~~~~~i 120 (310)
++++||+|++.+.... . .+ ....|+|++|+++|...++++
T Consensus 77 ~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i 156 (369)
T cd08301 77 DLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKI 156 (369)
T ss_pred ccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEEC
Confidence 9999999987532100 0 00 002488999999999999999
Q ss_pred CCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCC
Q 021628 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD 198 (310)
Q Consensus 121 p~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~ 198 (310)
|+++++++++++++++.|+|+++ +..++++|++|+|+| +|++|++++++|+.+ |+ +|+++++++++++.++++|++
T Consensus 157 P~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~q~ak~~-G~~~vi~~~~~~~~~~~~~~~Ga~ 234 (369)
T cd08301 157 NPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFG-LGAVGLAVAEGARIR-GASRIIGVDLNPSKFEQAKKFGVT 234 (369)
T ss_pred CCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCc
Confidence 99999999999999999999987 568899999999998 699999999999996 88 789999999999999999999
Q ss_pred EEeeCCCC--ccc----c-cCCCccEEEeCCCC---hHHHHhhcccC-CEEEEEeCCCCCCc-----------eEEEEe-
Q 021628 199 LAIDYTKE--NIE----D-LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPPA-----------SSFVLT- 255 (310)
Q Consensus 199 ~~~~~~~~--~~~----~-~~~~~dvvi~~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~~-----------~~~~~~- 255 (310)
.+++.... .+. . ..+++|++||++|. ...++++++++ |+++.+|....+.. ..+...
T Consensus 235 ~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 314 (369)
T cd08301 235 EFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTL 314 (369)
T ss_pred eEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEe
Confidence 88876542 221 1 12379999999974 47889999996 99999986532111 111110
Q ss_pred ----cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEE
Q 021628 256 ----SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306 (310)
Q Consensus 256 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi 306 (310)
....+++++++++.++.++....++++|+++|+++|++.+.+++.. |++|
T Consensus 315 ~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~ 368 (369)
T cd08301 315 FGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL 368 (369)
T ss_pred cCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence 1134688899999999987755567899999999999999988875 8776
No 20
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.9e-40 Score=297.80 Aligned_cols=296 Identities=23% Similarity=0.270 Sum_probs=240.3
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
||++++.++++. ++++ +.|.|+++++||+||+.++++|++|++.+.+.. .+|.++|||++|+|+++|+++.
T Consensus 13 mka~~~~~~~~~---~~~~-e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~-----~~p~i~GhE~~G~V~~vG~~v~ 83 (378)
T PLN02827 13 CRAAVAWGAGEA---LVME-EVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA-----LFPRIFGHEASGIVESIGEGVT 83 (378)
T ss_pred eEEEEEecCCCC---ceEE-EeecCCCCCCEEEEEEEEEecChhHHHHhcCCC-----CCCeeecccceEEEEEcCCCCc
Confidence 899999987754 6888 899999999999999999999999999887642 3578999999999999999999
Q ss_pred CCCCCCeeEeecCcccc----------------------------------CC-----CCCCCcceeEEEEecCccccCC
Q 021628 81 KFKVGDEVYGDINEKAL----------------------------------DH-----PKRNGSLAEYTAVEENLLALKP 121 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~----------------------------------~~-----~~~~g~~~~~~~~~~~~~~~ip 121 (310)
++++||+|+..+..... .+ ....|+|++|+.+|...++++|
T Consensus 84 ~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP 163 (378)
T PLN02827 84 EFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVD 163 (378)
T ss_pred ccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECC
Confidence 99999999876421000 00 0024899999999999999999
Q ss_pred CCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCE
Q 021628 122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADL 199 (310)
Q Consensus 122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~ 199 (310)
+++++++++.+++++.++|+++ +.+++++|++|+|+| +|++|++++|+|+.+ |++ +++++.++++++.++++|+++
T Consensus 164 ~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G-~G~vG~~~iqlak~~-G~~~vi~~~~~~~~~~~a~~lGa~~ 241 (378)
T PLN02827 164 PLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFG-LGTVGLSVAQGAKLR-GASQIIGVDINPEKAEKAKTFGVTD 241 (378)
T ss_pred CCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCcE
Confidence 9999999999998988999877 568899999999999 799999999999996 885 666777999999999999998
Q ss_pred EeeCCCC--cccc-----cCCCccEEEeCCCC---hHHHHhhcccC-CEEEEEeCCCCCCce-----------EEEEe--
Q 021628 200 AIDYTKE--NIED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPPAS-----------SFVLT-- 255 (310)
Q Consensus 200 ~~~~~~~--~~~~-----~~~~~dvvi~~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~~~-----------~~~~~-- 255 (310)
++++++. ++.. ...++|+|||++|. +..+++.++++ |+++.+|.......+ .+...
T Consensus 242 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~ 321 (378)
T PLN02827 242 FINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLF 321 (378)
T ss_pred EEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeec
Confidence 8876542 2211 12379999999984 47899999998 999999865321111 11110
Q ss_pred ---cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 256 ---SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 256 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
....++..+++++.++++++...+++.|+++++++|++.+.+++. +|+||++
T Consensus 322 ~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~ 376 (378)
T PLN02827 322 GGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHM 376 (378)
T ss_pred CCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEe
Confidence 013468889999999999875456789999999999999998877 5999875
No 21
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.2e-39 Score=293.03 Aligned_cols=298 Identities=22% Similarity=0.295 Sum_probs=236.0
Q ss_pred EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (310)
Q Consensus 2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~ 81 (310)
||+.+...+.. ..+++. +.+.|.++++||+||+.++++|++|++.+.|.++ ...+|.++|||++|+|+++|+++.+
T Consensus 6 ~a~~~~~~~~~-~~l~~~-~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~--~~~~p~i~GhE~aG~Vv~vG~~v~~ 81 (375)
T PLN02178 6 KAFGWAANDES-GVLSPF-HFSRRENGENDVTVKILFCGVCHSDLHTIKNHWG--FSRYPIIPGHEIVGIATKVGKNVTK 81 (375)
T ss_pred eeEEEEEccCC-CCceEE-eecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCC--CCCCCcccCceeeEEEEEECCCCCc
Confidence 45555555554 447887 8888999999999999999999999999988652 2346889999999999999999999
Q ss_pred CCCCCeeEeecC----c---------------ccc-------CCCCCCCcceeEEEEecCccccCCCCCChhhhccccch
Q 021628 82 FKVGDEVYGDIN----E---------------KAL-------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLA 135 (310)
Q Consensus 82 ~~~Gd~V~~~~~----~---------------~~~-------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~ 135 (310)
+++||+|...+. + ... .+....|+|++|+++|.+.++++|++++++++++++++
T Consensus 82 ~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~ 161 (375)
T PLN02178 82 FKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCA 161 (375)
T ss_pred cCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhcc
Confidence 999999974210 0 000 01123699999999999999999999999999999999
Q ss_pred HHHHHHHHHhcc--cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh-hHHHHHHcCCCEEeeCCCC-ccccc
Q 021628 136 TETAYEGLERSA--FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKE-NIEDL 211 (310)
Q Consensus 136 ~~ta~~al~~~~--~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~-~~~~~~~~g~~~~~~~~~~-~~~~~ 211 (310)
..|+|+++.... .++|++|+|.| +|++|++++|+|+.+ |+++++++.+++ +.+.++++|++++++..+. .....
T Consensus 162 ~~ta~~al~~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~-Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~ 239 (375)
T PLN02178 162 GITVYSPMKYYGMTKESGKRLGVNG-LGGLGHIAVKIGKAF-GLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEA 239 (375)
T ss_pred chHHHHHHHHhCCCCCCCCEEEEEc-ccHHHHHHHHHHHHc-CCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHh
Confidence 999999985433 46899999998 699999999999996 999988887655 4677789999998876432 11122
Q ss_pred CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCc----------eEEEE--ecCHHHHHHHHHHHHcCCeeEE
Q 021628 212 PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA----------SSFVL--TSDGSILEKLNPYFESGKVKAI 276 (310)
Q Consensus 212 ~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~----------~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 276 (310)
..++|++|||+|. +..++++++++|+++.+|....+.. ..+.. .....++.++++++.+|++++.
T Consensus 240 ~~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~ 319 (375)
T PLN02178 240 VGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSD 319 (375)
T ss_pred hCCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCCccc
Confidence 2479999999984 4789999999999999986432111 11111 1134678999999999999875
Q ss_pred ecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 277 IDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 277 ~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
+ +.|+++|+++|++.+.+++..||+++++
T Consensus 320 i---~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 320 I---ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred E---EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 3 5799999999999999999889999875
No 22
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=3.3e-39 Score=289.16 Aligned_cols=298 Identities=23% Similarity=0.302 Sum_probs=240.1
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|+++++..+++. ++++ +++.|+++++||+||+.++++|++|++.+.|.++ ...+|.++|||++|+|+++|++++
T Consensus 10 ~~~~~~~~~~~~---~~~~-~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~--~~~~p~i~G~E~~G~Vv~vG~~v~ 83 (357)
T PLN02514 10 TTGWAARDPSGH---LSPY-TYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLG--MSNYPMVPGHEVVGEVVEVGSDVS 83 (357)
T ss_pred EEEEEEecCCCC---ceEE-eecCCCCCCCcEEEEEEEeccChHHHHhhcCCcC--cCCCCccCCceeeEEEEEECCCcc
Confidence 579999999976 7888 8999999999999999999999999999988653 234688999999999999999999
Q ss_pred CCCCCCeeEeecC----c--------c--------c------cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccc
Q 021628 81 KFKVGDEVYGDIN----E--------K--------A------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPL 134 (310)
Q Consensus 81 ~~~~Gd~V~~~~~----~--------~--------~------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~ 134 (310)
++++||+|+..+. + . + ..+....|+|++|+++|...++++|+++++++++.+++
T Consensus 84 ~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~ 163 (357)
T PLN02514 84 KFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLC 163 (357)
T ss_pred cccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhh
Confidence 9999999974210 0 0 0 00112369999999999999999999999999999999
Q ss_pred hHHHHHHHHH-hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEeeCCCC-ccccc
Q 021628 135 ATETAYEGLE-RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKE-NIEDL 211 (310)
Q Consensus 135 ~~~ta~~al~-~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~-~~~~~ 211 (310)
++.|||+++. ....++|++|+|+| +|++|++++++|+.+ |++++++++++++++.+ +++|++.+++..+. .....
T Consensus 164 ~~~ta~~al~~~~~~~~g~~vlV~G-~G~vG~~av~~Ak~~-G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~ 241 (357)
T PLN02514 164 AGVTVYSPLSHFGLKQSGLRGGILG-LGGVGHMGVKIAKAM-GHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEA 241 (357)
T ss_pred hHHHHHHHHHHcccCCCCCeEEEEc-ccHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHHh
Confidence 9999999985 45568999999997 799999999999996 99999888887776555 67999877664332 12223
Q ss_pred CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCce----------EEE--EecCHHHHHHHHHHHHcCCeeEE
Q 021628 212 PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS----------SFV--LTSDGSILEKLNPYFESGKVKAI 276 (310)
Q Consensus 212 ~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~----------~~~--~~~~~~~~~~~~~~~~~~~~~~~ 276 (310)
..++|++||++|. ...++++++++|+++.+|....+..+ .+. ......++.++++++.++++.+.
T Consensus 242 ~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~~~ 321 (357)
T PLN02514 242 ADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFCKEKGLTSM 321 (357)
T ss_pred cCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHHHhCCCcCc
Confidence 3479999999983 57899999999999999865321111 111 11234578999999999998754
Q ss_pred ecCCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628 277 IDPKGPFPFSQTLEAFSHLESSRATGKVVIHPI 309 (310)
Q Consensus 277 ~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~ 309 (310)
.+.|+++|+.+|++.+.++...+|++++++
T Consensus 322 ---i~~~~l~~~~~A~~~~~~~~~~gk~v~~~~ 351 (357)
T PLN02514 322 ---IEVVKMDYVNTAFERLEKNDVRYRFVVDVA 351 (357)
T ss_pred ---EEEEcHHHHHHHHHHHHcCCCceeEEEEcc
Confidence 257999999999999999998899999874
No 23
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=3.1e-39 Score=288.63 Aligned_cols=297 Identities=22% Similarity=0.301 Sum_probs=237.3
Q ss_pred CEEEEEcccCCCccceEEeccccCCCC-CCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~ 79 (310)
|||++++++++. +++ +.|.|++ .++||+||+.++++|++|++.+.... ...+|.++|||++|+|+++|+++
T Consensus 1 Mka~~~~~~~~~----~~~-~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~---~~~~p~i~G~e~~G~V~~vG~~v 72 (347)
T PRK10309 1 MKSVVNDTDGIV----RVA-ESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG---AHYYPITLGHEFSGYVEAVGSGV 72 (347)
T ss_pred CceEEEeCCCce----EEE-ECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC---CCCCCcccccceEEEEEEeCCCC
Confidence 999999987764 888 8999987 59999999999999999987543211 12358899999999999999999
Q ss_pred CCCCCCCeeEeecCcc------------------ccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628 80 KKFKVGDEVYGDINEK------------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (310)
Q Consensus 80 ~~~~~Gd~V~~~~~~~------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 141 (310)
+++++||+|++.+... ...+....|+|++|+.+|...++++|+++++++++.+. .+.++++
T Consensus 73 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~ 151 (347)
T PRK10309 73 DDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLH 151 (347)
T ss_pred CCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHH
Confidence 9999999998864210 01112236999999999999999999999999998773 3455788
Q ss_pred HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCcccc---c--CCCc
Q 021628 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED---L--PEKF 215 (310)
Q Consensus 142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~--~~~~ 215 (310)
+++....++|++|+|+| +|++|++++|+|+.+ |++ ++++++++++++.++++|++++++.+..+... . ..++
T Consensus 152 ~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~ 229 (347)
T PRK10309 152 AFHLAQGCEGKNVIIIG-AGTIGLLAIQCAVAL-GAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLRELRF 229 (347)
T ss_pred HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCCCC
Confidence 87778889999999998 799999999999996 987 67788899999999999999988765433211 1 2368
Q ss_pred c-EEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC-------------ceEEEEe--c-----CHHHHHHHHHHHHcC
Q 021628 216 D-VVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP-------------ASSFVLT--S-----DGSILEKLNPYFESG 271 (310)
Q Consensus 216 d-vvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~-------------~~~~~~~--~-----~~~~~~~~~~~~~~~ 271 (310)
| ++|||+|. +..++++++++|+++.+|...... ...+... . ..++++++++++.++
T Consensus 230 d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g 309 (347)
T PRK10309 230 DQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTER 309 (347)
T ss_pred CeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcC
Confidence 8 99999984 478999999999999998643110 0111111 0 136788999999999
Q ss_pred CeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 272 KVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
.+++...+++.|+++|+++|++.+.+++..||+++++
T Consensus 310 ~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 310 KLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred CCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 9976556789999999999999999988889999875
No 24
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=4.4e-39 Score=289.37 Aligned_cols=296 Identities=25% Similarity=0.300 Sum_probs=240.6
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||+++.+.++. ++++ +.|.|.+.++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|+++.
T Consensus 3 ~ka~~~~~~~~~---~~~~-~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~---~~~p~i~G~e~~G~V~~vG~~v~ 75 (365)
T cd08277 3 CKAAVAWEAGKP---LVIE-EIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA---TLFPVILGHEGAGIVESVGEGVT 75 (365)
T ss_pred cEEEEEccCCCC---cEEE-EEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC---CCCCeecccceeEEEEeeCCCCc
Confidence 799999987765 6888 8999999999999999999999999999988653 45688999999999999999999
Q ss_pred CCCCCCeeEeecCccc------cC--------------------------------CCCCCCcceeEEEEecCccccCCC
Q 021628 81 KFKVGDEVYGDINEKA------LD--------------------------------HPKRNGSLAEYTAVEENLLALKPK 122 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~------~~--------------------------------~~~~~g~~~~~~~~~~~~~~~ip~ 122 (310)
++++||+|++.+.... .. .....|+|++|++++...++++|+
T Consensus 76 ~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~ 155 (365)
T cd08277 76 NLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDP 155 (365)
T ss_pred cCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCC
Confidence 9999999987532100 00 001248999999999999999999
Q ss_pred CCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEE
Q 021628 123 NLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLA 200 (310)
Q Consensus 123 ~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~ 200 (310)
++++++++.+++++.|||+++ +.+++++|++|+|+| +|++|++++++|+.+ |+ +|+++++++++++.++++|++++
T Consensus 156 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~-G~~~Vi~~~~~~~~~~~~~~~ga~~~ 233 (365)
T cd08277 156 AAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFG-LGAVGLSAIMGAKIA-GASRIIGVDINEDKFEKAKEFGATDF 233 (365)
T ss_pred CCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCCcE
Confidence 999999999999999999987 678899999999998 799999999999996 88 68889999999999999999988
Q ss_pred eeCCCCc--cc-----ccCCCccEEEeCCCC---hHHHHhhcccC-CEEEEEeCCCC---C-------CceEEEE--ec-
Q 021628 201 IDYTKEN--IE-----DLPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVT---P-------PASSFVL--TS- 256 (310)
Q Consensus 201 ~~~~~~~--~~-----~~~~~~dvvi~~~g~---~~~~~~~l~~~-G~~v~~g~~~~---~-------~~~~~~~--~~- 256 (310)
++..+.+ +. ...+++|++||++|. ...++++++++ |+++.+|.... + ....+.. ..
T Consensus 234 i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~ 313 (365)
T cd08277 234 INPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLILGRTWKGSFFGG 313 (365)
T ss_pred eccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhhCCEEEeeecCC
Confidence 8765422 11 113579999999984 47899999885 99999986421 0 0111111 01
Q ss_pred --CHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEE
Q 021628 257 --DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306 (310)
Q Consensus 257 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi 306 (310)
...+++++++++.++.++....++++|+++|+++|++.+.+++. .|+++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~i 364 (365)
T cd08277 314 FKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGEC-IRTVI 364 (365)
T ss_pred CChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCC-ceEee
Confidence 13468899999999988765566889999999999999988774 48776
No 25
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=6.7e-39 Score=283.87 Aligned_cols=291 Identities=26% Similarity=0.363 Sum_probs=237.3
Q ss_pred CEEEEEcccCCCc--cceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCC
Q 021628 1 MKAWVYKEYGNSQ--SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ 78 (310)
Q Consensus 1 mka~~~~~~g~~~--~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~ 78 (310)
||++++.+++.+. +.++++ +.|.|+++++||+||+.++++|++|++.+.|.++. ...+|.++|||++|+|+++|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~-~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~-~~~~p~v~G~e~~G~V~~vG~~ 78 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLP-EPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGS-TKALPVPPGFEGSGTVVAAGGG 78 (324)
T ss_pred CeEEEEeecCCCccccEEEec-ccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC-CCCCCcCCCcceEEEEEEECCC
Confidence 9999999988531 347888 89999999999999999999999999999887642 2356889999999999999999
Q ss_pred CCC-CCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEE
Q 021628 79 VKK-FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVL 157 (310)
Q Consensus 79 ~~~-~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ 157 (310)
+.+ +++||+|++... .+|+|++|+.+|.+.++++|+++++++++.+++.+.|||.++..... ++++++|+
T Consensus 79 v~~~~~vGd~V~~~~~--------~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~-~~~~vlv~ 149 (324)
T cd08291 79 PLAQSLIGKRVAFLAG--------SYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLETARE-EGAKAVVH 149 (324)
T ss_pred ccccCCCCCEEEecCC--------CCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHHHhhcc-CCCcEEEE
Confidence 986 999999998642 14899999999999999999999999999888888899866555555 56666665
Q ss_pred -cCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHH
Q 021628 158 -GGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKA 228 (310)
Q Consensus 158 -g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~ 228 (310)
+++|++|++++|+|+.+ |++++++++++++++.++++|++++++++..++.. ..+++|++||++|. ....
T Consensus 150 ~~g~g~vG~~a~q~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~~~~~ 228 (324)
T cd08291 150 TAAASALGRMLVRLCKAD-GIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQI 228 (324)
T ss_pred ccCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcHHHHHH
Confidence 77999999999999996 99999999999999999999999999876654422 12479999999984 4678
Q ss_pred HhhcccCCEEEEEeCCCCC----C--------ceEEEEe--------cCHHHHHHHHHHHHcCCeeEEecCCcccchhhH
Q 021628 229 LKAVKEGGRVVSIIGSVTP----P--------ASSFVLT--------SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQT 288 (310)
Q Consensus 229 ~~~l~~~G~~v~~g~~~~~----~--------~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (310)
+++++++|+++.+|..... . ...+... ...+.+.+++++++ +.+++. ++++|+++|+
T Consensus 229 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--i~~~~~l~~~ 305 (324)
T cd08291 229 LLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTT--FASRYPLALT 305 (324)
T ss_pred HHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Cccccc--eeeEEcHHHH
Confidence 9999999999999854211 0 1111110 12346778888887 777764 4688999999
Q ss_pred HHHHHHHHcCCCCccEEE
Q 021628 289 LEAFSHLESSRATGKVVI 306 (310)
Q Consensus 289 ~~a~~~~~~~~~~~k~vi 306 (310)
++|++.+.++...||+++
T Consensus 306 ~~a~~~~~~~~~~Gkvv~ 323 (324)
T cd08291 306 LEAIAFYSKNMSTGKKLL 323 (324)
T ss_pred HHHHHHHHhCCCCCeEEe
Confidence 999999999988899887
No 26
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=5.1e-39 Score=287.33 Aligned_cols=296 Identities=21% Similarity=0.346 Sum_probs=237.7
Q ss_pred EEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 021628 4 WVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK 83 (310)
Q Consensus 4 ~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~ 83 (310)
+++.++|++ ++++ +.|.|.++++||+||+.++++|++|++.+.+.+. ....+|.++|||++|+|+++|+++..+
T Consensus 2 ~~~~~~g~~---~~~~-~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~-~~~~~p~i~GhE~~G~V~~vG~~v~~~- 75 (349)
T TIGR03201 2 WMMTEPGKP---MVKT-RVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVR-TNHALPLALGHEISGRVIQAGAGAASW- 75 (349)
T ss_pred ceEecCCCC---ceEE-eccCCCCCCCeEEEEEEEEeecccchHHHcCCCC-ccCCCCeeccccceEEEEEeCCCcCCC-
Confidence 567778874 5888 8999999999999999999999999998754332 123568899999999999999999877
Q ss_pred CCCeeEeecCcc------------------ccCCCCCCCcceeEEEEecCccccCCC------CCChhhhccccchHHHH
Q 021628 84 VGDEVYGDINEK------------------ALDHPKRNGSLAEYTAVEENLLALKPK------NLSFVEAASLPLATETA 139 (310)
Q Consensus 84 ~Gd~V~~~~~~~------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~------~~~~~~aa~~~~~~~ta 139 (310)
+||+|+..+... ...+....|+|++|+++|.+.++++|+ ++++++++.+++++.++
T Consensus 76 ~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta 155 (349)
T TIGR03201 76 IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTP 155 (349)
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHH
Confidence 999998742110 011122469999999999999999999 89999999999999999
Q ss_pred HHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCc---ccc----c-
Q 021628 140 YEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN---IED----L- 211 (310)
Q Consensus 140 ~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~----~- 211 (310)
|+++....+++|++|+|+|+ |++|++++++|+.+ |++++++++++++++.++++|++++++..+.+ +.+ .
T Consensus 156 ~~a~~~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~-G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t 233 (349)
T TIGR03201 156 YQAAVQAGLKKGDLVIVIGA-GGVGGYMVQTAKAM-GAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFA 233 (349)
T ss_pred HHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhc
Confidence 99997788999999999996 99999999999996 99999999999999999999999888765432 111 1
Q ss_pred -CCCcc----EEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCce----------EEEE--ecCHHHHHHHHHHHHcC
Q 021628 212 -PEKFD----VVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS----------SFVL--TSDGSILEKLNPYFESG 271 (310)
Q Consensus 212 -~~~~d----vvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~----------~~~~--~~~~~~~~~~~~~~~~~ 271 (310)
..++| ++|||+|+ ...++++++++|+++.+|....+..+ .... .....+++++++++.++
T Consensus 234 ~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g 313 (349)
T TIGR03201 234 KARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDG 313 (349)
T ss_pred ccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcC
Confidence 23565 89999985 36789999999999999865421111 1111 11346789999999999
Q ss_pred CeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 272 KVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
++++.... +.|+++++++||+.+.+++..+|+++++
T Consensus 314 ~i~~~~~i-~~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 314 KIQLGPFV-ERRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred CCCcccce-EEecHHHHHHHHHHHHcCCccceEEecC
Confidence 99865443 4699999999999999998888988863
No 27
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=4.3e-39 Score=286.67 Aligned_cols=292 Identities=20% Similarity=0.178 Sum_probs=220.1
Q ss_pred EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCC--CCCCCcccccceeEEEEEeCCCC
Q 021628 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSAT--DSPLPTIPGYDVAGVVEKVGSQV 79 (310)
Q Consensus 2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~--~~~~p~~~G~e~~G~V~~~g~~~ 79 (310)
|++++.++++. +++ +.|.|+ +++||+|||.++|||++|++.++|.++.. ...+|.++|||++|+|++.|.+
T Consensus 4 ~~~~~~~~~~~----~~~-~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~- 76 (341)
T cd08237 4 QVYRLVRPKFF----EVT-YEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG- 76 (341)
T ss_pred cceEEeccceE----EEe-ecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC-
Confidence 57788877765 888 899995 99999999999999999999999865321 1357999999999999998764
Q ss_pred CCCCCCCeeEeecCccc---------------cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH
Q 021628 80 KKFKVGDEVYGDINEKA---------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE 144 (310)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~---------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~ 144 (310)
++++||||+..+.... ..+...+|+|+||+++|.+.++++|+++++++|+.. ..++++++++.
T Consensus 77 -~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~-~~~~~a~~a~~ 154 (341)
T cd08237 77 -TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFT-ELVSVGVHAIS 154 (341)
T ss_pred -ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhh-chHHHHHHHHH
Confidence 6999999987542110 011123699999999999999999999999887755 46677898884
Q ss_pred ---hcccCCCCEEEEEcCCcchHHHHHHHHHh-hcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEe
Q 021628 145 ---RSAFSAGKSILVLGGAGGVGTMVIQLAKH-VFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFD 220 (310)
Q Consensus 145 ---~~~~~~g~~vlI~g~~g~~G~~a~~la~~-~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~ 220 (310)
...+++||+|+|+| +|++|++++++++. .++.+|++++++++|++.+++.+.++.++. ..+ ..++|+|||
T Consensus 155 ~~~~~~~~~g~~VlV~G-~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~~----~~~-~~g~d~viD 228 (341)
T cd08237 155 RFEQIAHKDRNVIGVWG-DGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLIDD----IPE-DLAVDHAFE 228 (341)
T ss_pred HHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehhh----hhh-ccCCcEEEE
Confidence 34578999999999 79999999999986 334688899999999999987665543321 111 126999999
Q ss_pred CCCC------hHHHHhhcccCCEEEEEeCCCCCC----------ceEEEE--ecCHHHHHHHHHHHHcC---CeeEEecC
Q 021628 221 AVGQ------CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVL--TSDGSILEKLNPYFESG---KVKAIIDP 279 (310)
Q Consensus 221 ~~g~------~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~ 279 (310)
++|. +..++++++++|+++.+|....+. ...+.. .....+++++++++.++ ..+....+
T Consensus 229 ~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 308 (341)
T cd08237 229 CVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRNPEVAEYLRKLV 308 (341)
T ss_pred CCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHHhCCcccCChHHHh
Confidence 9982 478999999999999998543211 111111 11346789999999998 22333456
Q ss_pred Ccccch---hhHHHHHHHHHcCCCCccEEEEeC
Q 021628 280 KGPFPF---SQTLEAFSHLESSRATGKVVIHPI 309 (310)
Q Consensus 280 ~~~~~~---~~~~~a~~~~~~~~~~~k~vi~~~ 309 (310)
++.|++ +++.++++.+.++ ..||++|+++
T Consensus 309 ~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~ 340 (341)
T cd08237 309 GGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE 340 (341)
T ss_pred ccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence 788997 4667777666554 6789999875
No 28
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=1.1e-38 Score=285.81 Aligned_cols=296 Identities=21% Similarity=0.236 Sum_probs=223.2
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCC-CCCCcccccceeEEEEEeCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD-SPLPTIPGYDVAGVVEKVGSQV 79 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~-~~~p~~~G~e~~G~V~~~g~~~ 79 (310)
||++++...+ . + ++++ +.|.|+++++||+||+.++++|++|++.+.|.++..+ ..+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~~-~-~-l~~~-~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~- 75 (355)
T cd08230 1 MKAIAVKPGK-P-G-VRVV-DIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG- 75 (355)
T ss_pred CceeEecCCC-C-C-CeEE-eCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-
Confidence 8999998533 2 3 7999 8999999999999999999999999999998753222 246789999999999999999
Q ss_pred CCCCCCCeeEeecCcc------cc-----C---------CC-CCCCcceeEEEEecCccccCCCCCChhhhccccchHHH
Q 021628 80 KKFKVGDEVYGDINEK------AL-----D---------HP-KRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATET 138 (310)
Q Consensus 80 ~~~~~Gd~V~~~~~~~------~~-----~---------~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~t 138 (310)
+.+++||+|+..+... .. . +. ..+|+|++|+++|...++++|++++ + ++.+..++.+
T Consensus 76 ~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~-~a~~~~p~~~ 153 (355)
T cd08230 76 SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-D-VGVLLEPLSV 153 (355)
T ss_pred CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-c-ceeecchHHH
Confidence 8999999998753210 00 0 00 1369999999999999999999999 3 3444444444
Q ss_pred HHHHHH-------hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec---ChhhHHHHHHcCCCEEeeCCCCcc
Q 021628 139 AYEGLE-------RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGADLAIDYTKENI 208 (310)
Q Consensus 139 a~~al~-------~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~---~~~~~~~~~~~g~~~~~~~~~~~~ 208 (310)
+++++. ....++|++|+|+| +|++|++++|+|+.+ |++|+++++ +++|++.++++|++.+ ++.+++.
T Consensus 154 ~~~a~~~~~~~~~~~~~~~g~~vlI~G-~G~vG~~a~q~ak~~-G~~vi~~~~~~~~~~~~~~~~~~Ga~~v-~~~~~~~ 230 (355)
T cd08230 154 VEKAIEQAEAVQKRLPTWNPRRALVLG-AGPIGLLAALLLRLR-GFEVYVLNRRDPPDPKADIVEELGATYV-NSSKTPV 230 (355)
T ss_pred HHHHHHHHhhhhhhcccCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEe-cCCccch
Confidence 444442 12367899999999 699999999999996 999998887 6889999999999874 5444332
Q ss_pred c--ccCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCC--CCceE--------------EEE--ecCHHHHHHHH
Q 021628 209 E--DLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT--PPASS--------------FVL--TSDGSILEKLN 265 (310)
Q Consensus 209 ~--~~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~--~~~~~--------------~~~--~~~~~~~~~~~ 265 (310)
. ....++|+||||+|+ +..++++++++|+++.+|.... ...+. +.. ....+++++++
T Consensus 231 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~ 310 (355)
T cd08230 231 AEVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFEQAV 310 (355)
T ss_pred hhhhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHHHHH
Confidence 1 123579999999984 4789999999999999986432 11111 011 11245688899
Q ss_pred HHHHcCCee----EEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 266 PYFESGKVK----AIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 266 ~~~~~~~~~----~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
+++.++.+. ....++++|+++|+++|++.+.++. .|++|++
T Consensus 311 ~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 311 EDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred HHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 999887732 2234578999999999999886544 4888864
No 29
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=4.7e-38 Score=278.35 Aligned_cols=293 Identities=24% Similarity=0.313 Sum_probs=244.7
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
||++++.+++.+.+.++++ +.|.|.+.++||+||+.++++|++|++.+.|.++. ....|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~-~~~~p~~~G~e~~G~V~~~G~~v~ 78 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIG-EVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGY-KPELPAIGGSEAVGVVDAVGEGVK 78 (324)
T ss_pred CeeEEEccCCChhHeEEEe-ecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC-CCCCCCCCCcceEEEEEEeCCCCC
Confidence 9999999887642357888 89999999999999999999999999999887642 234578999999999999999999
Q ss_pred CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCC
Q 021628 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGA 160 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~ 160 (310)
++++||+|+++.. .|+|++|+.++...++++|+++++++++.+++.+.++|+++...++++|++|+|+|++
T Consensus 79 ~~~~Gd~V~~~~~---------~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~~~~~~g~~vlI~g~~ 149 (324)
T cd08292 79 GLQVGQRVAVAPV---------HGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDFLGVKPGQWLIQNAAG 149 (324)
T ss_pred CCCCCCEEEeccC---------CCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHHhhCCCCCCEEEEcccc
Confidence 9999999998642 5899999999999999999999999999999899999999877899999999999989
Q ss_pred cchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhhc
Q 021628 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKAV 232 (310)
Q Consensus 161 g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~l 232 (310)
|.+|++++++|+.+ |++++++++++++.+.++++|.+++++.++.++.. ..+++|++||++|. ...+++++
T Consensus 150 g~ig~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l 228 (324)
T cd08292 150 GAVGKLVAMLAAAR-GINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLL 228 (324)
T ss_pred cHHHHHHHHHHHHC-CCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhh
Confidence 99999999999996 99999999999999988889998888776544321 12479999999884 57889999
Q ss_pred ccCCEEEEEeCCCC-----------CCceEEEEec------------CHHHHHHHHHHHHcCCeeEEecCCcccchhhHH
Q 021628 233 KEGGRVVSIIGSVT-----------PPASSFVLTS------------DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTL 289 (310)
Q Consensus 233 ~~~G~~v~~g~~~~-----------~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (310)
+++|+++.+|.... ..+..+.... ....+.++++++.++.+++.. .+.|++++++
T Consensus 229 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~--~~~~~~~~~~ 306 (324)
T cd08292 229 GEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPV--EAVFDLGDAA 306 (324)
T ss_pred cCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCcc--ccEecHHHHH
Confidence 99999999985421 1112222111 124578899999999998542 5789999999
Q ss_pred HHHHHHHcCCCCccEEEE
Q 021628 290 EAFSHLESSRATGKVVIH 307 (310)
Q Consensus 290 ~a~~~~~~~~~~~k~vi~ 307 (310)
+|++.+.++...+|++++
T Consensus 307 ~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 307 KAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HHHHHHHcCCCCceEEeC
Confidence 999999888777888763
No 30
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=3.8e-38 Score=282.08 Aligned_cols=298 Identities=28% Similarity=0.377 Sum_probs=239.0
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCC-CC--------CCCCCcccccceeEE
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFS-AT--------DSPLPTIPGYDVAGV 71 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~-~~--------~~~~p~~~G~e~~G~ 71 (310)
|||+++.+++++ +++ ++|.|+++++||+||+.++++|++|+..+.+... .. ...+|.++|||++|+
T Consensus 1 mka~~~~~~~~l----~~~-~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~ 75 (351)
T cd08233 1 MKAARYHGRKDI----RVE-EVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGV 75 (351)
T ss_pred CceEEEecCCce----EEE-eccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEE
Confidence 999999987654 889 8999999999999999999999999887654210 00 123688999999999
Q ss_pred EEEeCCCCCCCCCCCeeEeecCcccc------------------CCC-CCCCcceeEEEEecCccccCCCCCChhhhccc
Q 021628 72 VEKVGSQVKKFKVGDEVYGDINEKAL------------------DHP-KRNGSLAEYTAVEENLLALKPKNLSFVEAASL 132 (310)
Q Consensus 72 V~~~g~~~~~~~~Gd~V~~~~~~~~~------------------~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~ 132 (310)
|+++|++++++++||+|++....... .+. ...|+|++|+.++...++++|+++++++++.+
T Consensus 76 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~ 155 (351)
T cd08233 76 VVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV 155 (351)
T ss_pred EEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc
Confidence 99999999999999999874321000 001 12599999999999999999999999988766
Q ss_pred cchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCcccc-
Q 021628 133 PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED- 210 (310)
Q Consensus 133 ~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~- 210 (310)
..+.+||+++...++++|++|+|+| +|.+|.+++|+|+.+ |+ +++++++++++.+.++++|++.++++++.++..
T Consensus 156 -~~~~ta~~~l~~~~~~~g~~vlI~g-~g~vG~~a~q~a~~~-G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~ 232 (351)
T cd08233 156 -EPLAVAWHAVRRSGFKPGDTALVLG-AGPIGLLTILALKAA-GASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAE 232 (351)
T ss_pred -cHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHH
Confidence 5778999999878899999999998 699999999999996 98 788888899999999999999998877654322
Q ss_pred ---c--CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC----------ceEEEE--ecCHHHHHHHHHHHHc
Q 021628 211 ---L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVL--TSDGSILEKLNPYFES 270 (310)
Q Consensus 211 ---~--~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~--~~~~~~~~~~~~~~~~ 270 (310)
. .+++|++||++|. .+.++++++++|+++.+|....+. ...+.. .....+++++++++.+
T Consensus 233 l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 312 (351)
T cd08233 233 VRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVIDLLAS 312 (351)
T ss_pred HHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHHHHHHHc
Confidence 1 2369999999973 478999999999999998654211 112111 1234679999999999
Q ss_pred CCeeEEecCCcccchhhH-HHHHHHHHcCCCC-ccEEE
Q 021628 271 GKVKAIIDPKGPFPFSQT-LEAFSHLESSRAT-GKVVI 306 (310)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~-~~a~~~~~~~~~~-~k~vi 306 (310)
+++++...++++|+++|+ ++|++.+.+++.. +|++|
T Consensus 313 g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 313 GKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred CCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 999764445688999996 7999999888864 89887
No 31
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=5.4e-38 Score=286.10 Aligned_cols=302 Identities=23% Similarity=0.290 Sum_probs=231.5
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHH-hCCCCC----CCCCCCcccccceeEEEEEe
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRM-LGAFSA----TDSPLPTIPGYDVAGVVEKV 75 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~-~g~~~~----~~~~~p~~~G~e~~G~V~~~ 75 (310)
||++++.++++. +++ +.|.|+++++||+||+.++|+|++|++.+ .|.... ....+|.++|||++|+|+++
T Consensus 3 ~~a~~~~~~~~l----~~~-e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~v 77 (410)
T cd08238 3 TKAWRMYGKGDL----RLE-KFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKV 77 (410)
T ss_pred cEEEEEEcCCce----EEE-ecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEe
Confidence 889999887764 899 89999999999999999999999999976 453211 11246889999999999999
Q ss_pred CCCCC-CCCCCCeeEeecCcccc-------CCCCCCCcceeEEEEecC----ccccCCCCCChhhhccc-cchH-HHHHH
Q 021628 76 GSQVK-KFKVGDEVYGDINEKAL-------DHPKRNGSLAEYTAVEEN----LLALKPKNLSFVEAASL-PLAT-ETAYE 141 (310)
Q Consensus 76 g~~~~-~~~~Gd~V~~~~~~~~~-------~~~~~~g~~~~~~~~~~~----~~~~ip~~~~~~~aa~~-~~~~-~ta~~ 141 (310)
|+++. .+++||||++.+..... .+...+|+|++|+++|.+ .++++|+++++++++.+ +.++ .++++
T Consensus 78 G~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~~ 157 (410)
T cd08238 78 GKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYT 157 (410)
T ss_pred CCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHhh
Confidence 99997 59999999875321110 011236999999999986 68999999999998865 4332 23443
Q ss_pred HH---------HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC---cEEEEecChhhHHHHHHc--------CCC-EE
Q 021628 142 GL---------ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA---SKVAATSSTAKLDLLRSL--------GAD-LA 200 (310)
Q Consensus 142 al---------~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~---~vi~~~~~~~~~~~~~~~--------g~~-~~ 200 (310)
++ +.+++++|++|+|+|++|++|++++|+|+.+ |. +|++++.+++|++.++++ |++ .+
T Consensus 158 a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~-G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~ 236 (410)
T cd08238 158 ANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHG-PIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLY 236 (410)
T ss_pred hcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhc-ccCCceEEEEcCCHHHHHHHHHhccccccccCceEEE
Confidence 32 3467899999999998999999999999985 54 789999999999999887 665 45
Q ss_pred eeCCC-Ccccc------cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC-C--CCce----------EEEE--e
Q 021628 201 IDYTK-ENIED------LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV-T--PPAS----------SFVL--T 255 (310)
Q Consensus 201 ~~~~~-~~~~~------~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~-~--~~~~----------~~~~--~ 255 (310)
+++.+ +++.. ...++|++||++|+ ...++++++++|+++.++... . ...+ .+.. .
T Consensus 237 i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~ 316 (410)
T cd08238 237 VNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSG 316 (410)
T ss_pred ECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEEEeCC
Confidence 66543 22211 12479999999874 478999999999988775421 1 1111 1111 1
Q ss_pred cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628 256 SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPI 309 (310)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~ 309 (310)
....+++++++++.+|++++...++++|+++++++|++.+. ++..||++|.++
T Consensus 317 ~~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~ 369 (410)
T cd08238 317 GNTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQ 369 (410)
T ss_pred CCHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECC
Confidence 23467899999999999998666789999999999999998 777899998763
No 32
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=2.2e-37 Score=275.19 Aligned_cols=296 Identities=27% Similarity=0.371 Sum_probs=243.7
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||+++..++.. ++++ +.|.|++.++||+||+.++++|++|+..+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~---~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~p~~~g~e~~G~v~~vG~~v~ 74 (333)
T cd08296 1 YKAVQVTEPGGP---LELV-ERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG--LSYPRVPGHEVVGRIDAVGEGVS 74 (333)
T ss_pred CeEEEEccCCCC---ceEE-eccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC--CCCCcccCcceeEEEEEECCCCc
Confidence 999999998543 5888 89999999999999999999999999999886532 34578899999999999999999
Q ss_pred CCCCCCeeEeecC-------------------ccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628 81 KFKVGDEVYGDIN-------------------EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (310)
Q Consensus 81 ~~~~Gd~V~~~~~-------------------~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 141 (310)
++++||+|++.+. ..+..+....|++++|+.++...++++|+++++.+++.+++++.++|+
T Consensus 75 ~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 154 (333)
T cd08296 75 RWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFN 154 (333)
T ss_pred cCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHH
Confidence 9999999986321 000111223589999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc---cCCCccEE
Q 021628 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED---LPEKFDVV 218 (310)
Q Consensus 142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~dvv 218 (310)
++...++.++++|+|+| +|.+|++++++|+.+ |++++++++++++++.++++|++++++....++.. ..+++|++
T Consensus 155 ~~~~~~~~~~~~vlV~g-~g~iG~~~~~~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~d~v 232 (333)
T cd08296 155 ALRNSGAKPGDLVAVQG-IGGLGHLAVQYAAKM-GFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQELGGAKLI 232 (333)
T ss_pred HHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhcCCCCEE
Confidence 99766899999999999 899999999999996 99999999999999999999999988876544321 12479999
Q ss_pred EeCCC---ChHHHHhhcccCCEEEEEeCCCCC----------CceEEEE--ecCHHHHHHHHHHHHcCCeeEEecCCccc
Q 021628 219 FDAVG---QCDKALKAVKEGGRVVSIIGSVTP----------PASSFVL--TSDGSILEKLNPYFESGKVKAIIDPKGPF 283 (310)
Q Consensus 219 i~~~g---~~~~~~~~l~~~G~~v~~g~~~~~----------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (310)
+|+.| ....++++++++|+++.+|..... ...++.. .....++..+++++.++.+++. .+.|
T Consensus 233 i~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~---v~~~ 309 (333)
T cd08296 233 LATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRPM---VETF 309 (333)
T ss_pred EECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCCCce---EEEE
Confidence 99976 357899999999999999865311 1111111 1235678889999998888764 2579
Q ss_pred chhhHHHHHHHHHcCCCCccEEEE
Q 021628 284 PFSQTLEAFSHLESSRATGKVVIH 307 (310)
Q Consensus 284 ~~~~~~~a~~~~~~~~~~~k~vi~ 307 (310)
+++++.+|++.+.+++.+||++++
T Consensus 310 ~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 310 PLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred EHHHHHHHHHHHHCCCCceeEEeC
Confidence 999999999999999999999874
No 33
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=2.8e-37 Score=252.79 Aligned_cols=295 Identities=28% Similarity=0.415 Sum_probs=242.4
Q ss_pred EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (310)
Q Consensus 2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~ 81 (310)
|+++|.++|+++++++++ +++.|+...++|+|+..+++|+++|+..++|.||.. +.+|.+-|+|++|+|+.+|+++.+
T Consensus 21 kalvY~~hgdP~kVlql~-~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvr-P~~PAVgGnEGv~eVv~vGs~vkg 98 (354)
T KOG0025|consen 21 KALVYSEHGDPAKVLQLK-NLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVR-PELPAVGGNEGVGEVVAVGSNVKG 98 (354)
T ss_pred ceeeecccCCchhhheee-cccCCCCCCCceeeeeeecCCChHHhhhhccccCCC-CCCCcccCCcceEEEEEecCCcCc
Confidence 799999999999999999 899999888889999999999999999999999854 567899999999999999999999
Q ss_pred CCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hcccCCCCEEEEEcCC
Q 021628 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGGA 160 (310)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g~~ 160 (310)
|++||+|+.... ..|+|++|.+.+.+.++++++.++.+.||++..+.+|||++|+ ...+.+||+|+..|+.
T Consensus 99 fk~Gd~VIp~~a--------~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNgan 170 (354)
T KOG0025|consen 99 FKPGDWVIPLSA--------NLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGAN 170 (354)
T ss_pred cCCCCeEeecCC--------CCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcc
Confidence 999999998763 3799999999999999999999999999999999999999995 6899999999999999
Q ss_pred cchHHHHHHHHHhhcCCcEEEEecChhhHHHH----HHcCCCEEeeCCCC---ccc---ccCCCccEEEeCCC--ChHHH
Q 021628 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLAIDYTKE---NIE---DLPEKFDVVFDAVG--QCDKA 228 (310)
Q Consensus 161 g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~----~~~g~~~~~~~~~~---~~~---~~~~~~dvvi~~~g--~~~~~ 228 (310)
+++|++.+|+|+++ |++.+-++|+....+.+ +.+|+++++...+- ... ....++.+.|||+| +.-+.
T Consensus 171 S~VG~~ViQlaka~-GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~i 249 (354)
T KOG0025|consen 171 SGVGQAVIQLAKAL-GIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATEI 249 (354)
T ss_pred cHHHHHHHHHHHHh-CcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHHHH
Confidence 99999999999996 99999999877766555 56899998743221 111 12346889999998 45788
Q ss_pred HhhcccCCEEEEEeCCCC-CCceE---------------EEEec--------CHHHHHHHHHHHHcCCeeEEecCCcccc
Q 021628 229 LKAVKEGGRVVSIIGSVT-PPASS---------------FVLTS--------DGSILEKLNPYFESGKVKAIIDPKGPFP 284 (310)
Q Consensus 229 ~~~l~~~G~~v~~g~~~~-~~~~~---------------~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (310)
.+.|..||.++.+|++.. +..+. ...+. +.+.+.++.++++.|++.... ....+
T Consensus 250 ar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~--~e~v~ 327 (354)
T KOG0025|consen 250 ARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPN--CEKVP 327 (354)
T ss_pred HHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeecccc--ceeee
Confidence 899999999999998751 11111 11111 125578899999999998753 35678
Q ss_pred hhhHHHHHHHHHcCC-CCccEEEEeC
Q 021628 285 FSQTLEAFSHLESSR-ATGKVVIHPI 309 (310)
Q Consensus 285 ~~~~~~a~~~~~~~~-~~~k~vi~~~ 309 (310)
+++-..|++...+.. ..+|-++.++
T Consensus 328 L~~~~tald~~L~~~~~~~Kq~i~~e 353 (354)
T KOG0025|consen 328 LADHKTALDAALSKFGKSGKQIIVLE 353 (354)
T ss_pred chhhhHHHHHHHHHhccCCceEEEec
Confidence 888888887654433 3356666553
No 34
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4.8e-37 Score=274.93 Aligned_cols=299 Identities=26% Similarity=0.324 Sum_probs=242.0
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||+++.+++++ +++ +.+.|.+.++||+||+.++++|++|++.+.+.++. ..+|.++|||++|+|+++|++++
T Consensus 1 mka~~~~~~~~~----~l~-~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~--~~~~~~~G~e~~G~V~~vG~~v~ 73 (351)
T cd08285 1 MKAFAMLGIGKV----GWI-EKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG--ERHGMILGHEAVGVVEEVGSEVK 73 (351)
T ss_pred CceEEEccCCcc----EEE-ECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC--CCCCcccCcceEEEEEEecCCcC
Confidence 999999998866 888 88989899999999999999999999988876532 35688999999999999999999
Q ss_pred CCCCCCeeEeecCcc---------------------ccCCCCCCCcceeEEEEecC--ccccCCCCCChhhhccccchHH
Q 021628 81 KFKVGDEVYGDINEK---------------------ALDHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLATE 137 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~---------------------~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~ 137 (310)
++++||+|++.+... +..+....|+|++|+.++.+ .++++|+++++++++.+++.+.
T Consensus 74 ~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ 153 (351)
T cd08285 74 DFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMS 153 (351)
T ss_pred ccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchh
Confidence 999999999743100 00011236899999999974 8999999999999999998999
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCcccc------
Q 021628 138 TAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED------ 210 (310)
Q Consensus 138 ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------ 210 (310)
||++++..+.+++|++|+|+| +|.+|++++++|+.+ |+. ++++++++++.+.++++|++++++..+.++..
T Consensus 154 ta~~~~~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~ 231 (351)
T cd08285 154 TGFHGAELANIKLGDTVAVFG-IGPVGLMAVAGARLR-GAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLT 231 (351)
T ss_pred hHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHHh
Confidence 999998778899999999997 799999999999996 885 77778889999999999999988876544321
Q ss_pred cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC--ce------------EEEE---ecCHHHHHHHHHHHHc
Q 021628 211 LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP--AS------------SFVL---TSDGSILEKLNPYFES 270 (310)
Q Consensus 211 ~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~--~~------------~~~~---~~~~~~~~~~~~~~~~ 270 (310)
...++|++||++|. ...++++++++|+++.+|...... .+ .+.. ....++++++++++.+
T Consensus 232 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 311 (351)
T cd08285 232 GGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEY 311 (351)
T ss_pred CCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHHc
Confidence 12479999999884 478999999999999987543211 00 1111 1124678899999999
Q ss_pred CCeeEEe-cCCcccchhhHHHHHHHHHcCC-CCccEEEEe
Q 021628 271 GKVKAII-DPKGPFPFSQTLEAFSHLESSR-ATGKVVIHP 308 (310)
Q Consensus 271 ~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~-~~~k~vi~~ 308 (310)
+++++.. ...+.|+++++++|++.+.+++ ...|++|+|
T Consensus 312 g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 312 GRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred CCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 9998732 2345699999999999998887 467999875
No 35
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=9.5e-37 Score=274.05 Aligned_cols=298 Identities=28% Similarity=0.360 Sum_probs=238.8
Q ss_pred EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (310)
Q Consensus 2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~ 81 (310)
|++++.++++. ++++ +.+.|.++++||+||+.++++|++|+....|.++. ..+|.++|||++|+|+++|+++.+
T Consensus 2 ka~~~~~~~~~---l~~~-~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~--~~~p~~~G~e~~G~V~~vG~~v~~ 75 (361)
T cd08231 2 RAAVLTGPGKP---LEIR-EVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR--VPLPIILGHEGVGRVVALGGGVTT 75 (361)
T ss_pred eEEEEcCCCCC---CEEE-eccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC--CCCCcccccCCceEEEEeCCCccc
Confidence 89999998844 6999 89999999999999999999999999999887631 456889999999999999999976
Q ss_pred ------CCCCCeeEeecCcc------------------ccCC-------CCCCCcceeEEEEecC-ccccCCCCCChhhh
Q 021628 82 ------FKVGDEVYGDINEK------------------ALDH-------PKRNGSLAEYTAVEEN-LLALKPKNLSFVEA 129 (310)
Q Consensus 82 ------~~~Gd~V~~~~~~~------------------~~~~-------~~~~g~~~~~~~~~~~-~~~~ip~~~~~~~a 129 (310)
+++||+|++.+.-. +..+ ....|+|++|+.++.. .++++|++++...+
T Consensus 76 ~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~a 155 (361)
T cd08231 76 DVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVA 155 (361)
T ss_pred cccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHH
Confidence 99999998863100 0000 1135999999999986 79999999999999
Q ss_pred ccccchHHHHHHHHH-hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCc
Q 021628 130 ASLPLATETAYEGLE-RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKEN 207 (310)
Q Consensus 130 a~~~~~~~ta~~al~-~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~ 207 (310)
+.+++++.|||+++. ....++|++|+|+| +|.+|++++++|+.+ |+ +++++++++++.+.++++|++.+++.+..+
T Consensus 156 a~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~-G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~ 233 (361)
T cd08231 156 APANCALATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLA-GARRVIVIDGSPERLELAREFGADATIDIDELP 233 (361)
T ss_pred HHhcCHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccc
Confidence 998899999999995 45556999999998 799999999999996 99 888899999999999999998888765433
Q ss_pred cc-------cc--CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCC------------CceEEEE--ecCHHHH
Q 021628 208 IE-------DL--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP------------PASSFVL--TSDGSIL 261 (310)
Q Consensus 208 ~~-------~~--~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~------------~~~~~~~--~~~~~~~ 261 (310)
.. .. .+++|++||++|. ...++++++++|+++.+|..... ....+.. ....+.+
T Consensus 234 ~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (361)
T cd08231 234 DPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHL 313 (361)
T ss_pred cHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhH
Confidence 21 11 2479999999874 47889999999999999854311 1111111 1235678
Q ss_pred HHHHHHHHcC--CeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 262 EKLNPYFESG--KVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 262 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
.++++++.++ .+.+...++++|+++++++|++.+.++.. +|++|++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 361 (361)
T cd08231 314 YRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP 361 (361)
T ss_pred HHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence 8899999988 54444345788999999999999988764 6988864
No 36
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=1.1e-36 Score=272.02 Aligned_cols=280 Identities=25% Similarity=0.331 Sum_probs=221.6
Q ss_pred cceEEeccccCCCC-CCCcEEEEEeEeecCHHHHHHHhCCCC-CCCCCCCcccccceeEEEEEeCCCCCCCCCCCeeEee
Q 021628 14 SVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFS-ATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGD 91 (310)
Q Consensus 14 ~~l~~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~-~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~ 91 (310)
+.++++ +.|.|++ ++|||+|||.++|||+.|......... .....+|.++|||++|+|+++|++++++++||+|+++
T Consensus 21 ~~~~~~-~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 99 (345)
T cd08293 21 ENFRVE-ECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF 99 (345)
T ss_pred cceEEE-eccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec
Confidence 578988 8999987 499999999999999998654432111 0123467889999999999999999999999999874
Q ss_pred cCccccCCCCCCCcceeEEEEecCccccCCCCCChhh----hccccchHHHHHHHH-HhcccCCC--CEEEEEcCCcchH
Q 021628 92 INEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVE----AASLPLATETAYEGL-ERSAFSAG--KSILVLGGAGGVG 164 (310)
Q Consensus 92 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~----aa~~~~~~~ta~~al-~~~~~~~g--~~vlI~g~~g~~G 164 (310)
.++|++|++++.+.++++|+++++.+ ++.+++++.|||+++ +.+++++| ++|+|+|++|++|
T Consensus 100 -----------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG 168 (345)
T cd08293 100 -----------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACG 168 (345)
T ss_pred -----------CCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHH
Confidence 25799999999999999999864322 455677899999998 56778877 9999999889999
Q ss_pred HHHHHHHHhhcCC-cEEEEecChhhHHHHHH-cCCCEEeeCCCCcccc-----cCCCccEEEeCCCC--hHHHHhhcccC
Q 021628 165 TMVIQLAKHVFGA-SKVAATSSTAKLDLLRS-LGADLAIDYTKENIED-----LPEKFDVVFDAVGQ--CDKALKAVKEG 235 (310)
Q Consensus 165 ~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~-----~~~~~dvvi~~~g~--~~~~~~~l~~~ 235 (310)
++++|+|+.+ |+ +|+++++++++.+.+++ +|+++++++.++++.. ..+++|++||++|. ...++++|+++
T Consensus 169 ~~aiqlAk~~-G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~~~~~~~~~l~~~ 247 (345)
T cd08293 169 SLAGQIGRLL-GCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGEISDTVISQMNEN 247 (345)
T ss_pred HHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCcHHHHHHHHHhccC
Confidence 9999999996 98 79999999999998876 9999998876655422 13589999999884 57899999999
Q ss_pred CEEEEEeCCCC--------C------------CceEEEE---ecC----HHHHHHHHHHHHcCCeeEEecCCcccchhhH
Q 021628 236 GRVVSIIGSVT--------P------------PASSFVL---TSD----GSILEKLNPYFESGKVKAIIDPKGPFPFSQT 288 (310)
Q Consensus 236 G~~v~~g~~~~--------~------------~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (310)
|+++.+|.... + ....+.. ... .+.++++++++.++.+++.. ...|+++++
T Consensus 248 G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~--~~~~~l~~~ 325 (345)
T cd08293 248 SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKE--TVYEGLENA 325 (345)
T ss_pred CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCcccee--EEeecHHHH
Confidence 99999874210 0 0111111 111 23467788999999998753 245699999
Q ss_pred HHHHHHHHcCCCCccEEEEe
Q 021628 289 LEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 289 ~~a~~~~~~~~~~~k~vi~~ 308 (310)
++|++.+.+++..||+++++
T Consensus 326 ~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 326 GEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred HHHHHHHhcCCCCCeEEEEC
Confidence 99999999998889999875
No 37
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=1.9e-36 Score=269.76 Aligned_cols=289 Identities=28% Similarity=0.357 Sum_probs=230.1
Q ss_pred CEEEEEcccCCCccceEEeccccC----CCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccce--eEEEEE
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEV----PSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDV--AGVVEK 74 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~----~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~--~G~V~~ 74 (310)
||+|+...+. . +.|+++ +.+. |+|++|||+|||.++++|+.|+....|.+.. ....|.++|++. .|.+..
T Consensus 8 ~~~~~~~~~~-~-~~~~~~-~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~-~~~~p~~~g~~~~g~~~~~~ 83 (338)
T cd08295 8 LKAYVTGFPK-E-SDLELR-TTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS-LYLPPFKPGEVITGYGVAKV 83 (338)
T ss_pred EecCCCCCCC-c-cceEEE-EecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCcc-ccCCCcCCCCeEeccEEEEE
Confidence 4566644444 3 678998 8877 8899999999999999999999988885321 124577888754 455556
Q ss_pred eCCCCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEec-CccccCC-CCCChh-hhccccchHHHHHHHH-HhcccCC
Q 021628 75 VGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEE-NLLALKP-KNLSFV-EAASLPLATETAYEGL-ERSAFSA 150 (310)
Q Consensus 75 ~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~ip-~~~~~~-~aa~~~~~~~ta~~al-~~~~~~~ 150 (310)
+|++++++++||+|+++ |+|+||+++|. ..++++| +++++. +++.+++++.|||+++ +.+++++
T Consensus 84 v~~~v~~~~vGd~V~~~------------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~ 151 (338)
T cd08295 84 VDSGNPDFKVGDLVWGF------------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKK 151 (338)
T ss_pred EecCCCCCCCCCEEEec------------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCC
Confidence 77888889999999873 68999999999 7999995 678876 7888999999999999 5689999
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-cCCCEEeeCCCC-cccc-----cCCCccEEEeCCC
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKE-NIED-----LPEKFDVVFDAVG 223 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~-~~~~-----~~~~~dvvi~~~g 223 (310)
|++|+|+|++|++|++++|+|+.+ |++++++++++++.+.+++ +|+++++++.++ ++.. ...++|++||++|
T Consensus 152 g~~VlI~Ga~G~vG~~aiqlAk~~-G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g 230 (338)
T cd08295 152 GETVFVSAASGAVGQLVGQLAKLK-GCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVG 230 (338)
T ss_pred CCEEEEecCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCC
Confidence 999999998899999999999996 9999999999999999988 999998886432 3321 1358999999998
Q ss_pred C--hHHHHhhcccCCEEEEEeCCCCC--------Cc--------eEEEE---ecC----HHHHHHHHHHHHcCCeeEEec
Q 021628 224 Q--CDKALKAVKEGGRVVSIIGSVTP--------PA--------SSFVL---TSD----GSILEKLNPYFESGKVKAIID 278 (310)
Q Consensus 224 ~--~~~~~~~l~~~G~~v~~g~~~~~--------~~--------~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~ 278 (310)
. ...++++++++|+++.+|..... .. ..+.. ... .+.+.++++++.++.+++..
T Consensus 231 ~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~- 309 (338)
T cd08295 231 GKMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVE- 309 (338)
T ss_pred HHHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEcee-
Confidence 4 57899999999999998753210 00 01111 111 24477889999999998753
Q ss_pred CCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 279 PKGPFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 279 ~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
...|+++++++|++.+.+++..||+++++
T Consensus 310 -~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 310 -DIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred -ecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 34699999999999999999899999874
No 38
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=2.7e-36 Score=267.56 Aligned_cols=295 Identities=29% Similarity=0.382 Sum_probs=246.7
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
||++++.++|.+ ..++++ +.+.|.+.++||+||+.++++|++|+....|.++. ..+|.++|||++|+|+.+|++++
T Consensus 2 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~--~~~~~~~g~e~~G~v~~vG~~v~ 77 (327)
T PRK10754 2 AKRIEFHKHGGP-EVLQAV-EFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP--PSLPSGLGTEAAGVVSKVGSGVK 77 (327)
T ss_pred ceEEEEeccCCh-hHeEEe-eccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC--CCCCCccCcceEEEEEEeCCCCC
Confidence 999999999988 889999 89999999999999999999999999988886632 34577899999999999999999
Q ss_pred CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 021628 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG 159 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~ 159 (310)
.+++||+|++.. ...|+|++|+.++...++++|+++++++++.+++.+.++|+++ ..+++.+|++|+|+|+
T Consensus 78 ~~~~Gd~V~~~~--------~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~ 149 (327)
T PRK10754 78 HIKVGDRVVYAQ--------SALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAA 149 (327)
T ss_pred CCCCCCEEEECC--------CCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeC
Confidence 999999998642 1258999999999999999999999999999988999999998 4688999999999998
Q ss_pred CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhh
Q 021628 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKA 231 (310)
Q Consensus 160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~ 231 (310)
+|.+|++++++|+.+ |++++.+++++++.+.++++|.+++++.+..++.. ..+++|++|||+|. ....+++
T Consensus 150 ~g~ig~~~~~lak~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~ 228 (327)
T PRK10754 150 AGGVGLIACQWAKAL-GAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDC 228 (327)
T ss_pred CcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHH
Confidence 999999999999996 99999999999999999999998888766544321 12479999999874 4788999
Q ss_pred cccCCEEEEEeCCCCC-C--ce--------EEEEe-------cC----HHHHHHHHHHHHcCCeeEEecCCcccchhhHH
Q 021628 232 VKEGGRVVSIIGSVTP-P--AS--------SFVLT-------SD----GSILEKLNPYFESGKVKAIIDPKGPFPFSQTL 289 (310)
Q Consensus 232 l~~~G~~v~~g~~~~~-~--~~--------~~~~~-------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (310)
++++|+++.+|..... . .. .+... .. ...+.++++++.++.+++....++.|++++++
T Consensus 229 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~ 308 (327)
T PRK10754 229 LQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQ 308 (327)
T ss_pred hccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHH
Confidence 9999999999854311 0 00 11000 01 12356788999999998755557899999999
Q ss_pred HHHHHHHcCCCCccEEEEe
Q 021628 290 EAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 290 ~a~~~~~~~~~~~k~vi~~ 308 (310)
++++.+.++...+|++|.+
T Consensus 309 ~a~~~~~~~~~~~~~~~~~ 327 (327)
T PRK10754 309 RAHEILESRATQGSSLLIP 327 (327)
T ss_pred HHHHHHHcCCCcceEEEeC
Confidence 9999999999899999863
No 39
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=2.7e-36 Score=268.96 Aligned_cols=298 Identities=33% Similarity=0.436 Sum_probs=244.6
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCC-CCCCCCcccccceeEEEEEeCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-TDSPLPTIPGYDVAGVVEKVGSQV 79 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~~g~~~ 79 (310)
||++++.++|++ ++++ +.+.|++.+++|+||+.++++|++|+....|.++. .+..+|.++|||++|+|+++|+++
T Consensus 1 ~ka~~~~~~~~~---~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v 76 (340)
T cd05284 1 MKAARLYEYGKP---LRLE-DVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGV 76 (340)
T ss_pred CeeeEeccCCCC---ceEE-eCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCC
Confidence 899999998765 6888 88999999999999999999999999998887643 334568899999999999999999
Q ss_pred CCCCCCCeeEeecCc--------------cc----cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628 80 KKFKVGDEVYGDINE--------------KA----LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (310)
Q Consensus 80 ~~~~~Gd~V~~~~~~--------------~~----~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 141 (310)
+.+++||+|++.... ++ .-+....|+|++|+.++.+.++++|+++++++++.+++.+.|||+
T Consensus 77 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~ 156 (340)
T cd05284 77 DGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYH 156 (340)
T ss_pred CcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHH
Confidence 999999999986421 00 011234689999999999999999999999999999999999999
Q ss_pred HHH-h-cccCCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc----c--C
Q 021628 142 GLE-R-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--P 212 (310)
Q Consensus 142 al~-~-~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~ 212 (310)
++. . ..+.++++|+|+| ++.+|++++++|+.+ | .+++++++++++.+.++++|.+++++++.. +.. . .
T Consensus 157 ~l~~~~~~~~~~~~vlI~g-~~~vg~~~~~~a~~~-g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~i~~~~~~ 233 (340)
T cd05284 157 AVKKALPYLDPGSTVVVIG-VGGLGHIAVQILRAL-TPATVIAVDRSEEALKLAERLGADHVLNASDD-VVEEVRELTGG 233 (340)
T ss_pred HHHHhcccCCCCCEEEEEc-CcHHHHHHHHHHHHh-CCCcEEEEeCCHHHHHHHHHhCCcEEEcCCcc-HHHHHHHHhCC
Confidence 994 3 4688999999999 677999999999997 7 899999999999999999999998887654 211 1 2
Q ss_pred CCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCC---------CCceEEEE--ecCHHHHHHHHHHHHcCCeeEEec
Q 021628 213 EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT---------PPASSFVL--TSDGSILEKLNPYFESGKVKAIID 278 (310)
Q Consensus 213 ~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~---------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 278 (310)
.++|+++|++|. ...++++++++|+++.+|.... .....+.. ......+..+++++.++.+++.
T Consensus 234 ~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~-- 311 (340)
T cd05284 234 RGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGHGRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKVKVE-- 311 (340)
T ss_pred CCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCCCccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCCCCcc--
Confidence 479999999884 4788999999999999975431 11222221 1245678899999999988752
Q ss_pred CCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 279 PKGPFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 279 ~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
.+.|+++++++|++.+.+++..+|+++.+
T Consensus 312 -~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 312 -ITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred -eEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 46799999999999999998888998764
No 40
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=1.5e-36 Score=269.92 Aligned_cols=298 Identities=31% Similarity=0.404 Sum_probs=225.4
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCc-ccccceeEEEEEeCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPT-IPGYDVAGVVEKVGSQV 79 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~-~~G~e~~G~V~~~g~~~ 79 (310)
||++++..+++. .+++ +.+.|.+.+++|+||+.++|||.||++++++..+. ...|. ++|||++|+|+++| .+
T Consensus 1 m~a~~~~~~~~~---~~~~-~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~--~~~~~~i~GHE~~G~V~evG-~~ 73 (350)
T COG1063 1 MKAAVVYVGGGD---VRLE-EPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPF--VPPGDIILGHEFVGEVVEVG-VV 73 (350)
T ss_pred CceeEEEecCCc---cccc-cCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCC--CCCCCcccCccceEEEEEec-cc
Confidence 788888887765 2356 66666679999999999999999999999996532 23344 89999999999999 77
Q ss_pred CCCCCCCeeEeecCc------------------c-----ccCCCCCCCcceeEEEEecCcccc-CCCCCChhhhccccch
Q 021628 80 KKFKVGDEVYGDINE------------------K-----ALDHPKRNGSLAEYTAVEENLLAL-KPKNLSFVEAASLPLA 135 (310)
Q Consensus 80 ~~~~~Gd~V~~~~~~------------------~-----~~~~~~~~g~~~~~~~~~~~~~~~-ip~~~~~~~aa~~~~~ 135 (310)
..+++||||...+.- . ...+...+|+|+||+++|.+.+++ +|++++ .+++++...
T Consensus 74 ~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~-~~~aal~ep 152 (350)
T COG1063 74 RGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGID-EEAAALTEP 152 (350)
T ss_pred cCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCC-hhhhhhcCh
Confidence 789999999876420 0 001112579999999999765554 588874 555566556
Q ss_pred HHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHH-cCCCEEeeCCCCccc---
Q 021628 136 TETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRS-LGADLAIDYTKENIE--- 209 (310)
Q Consensus 136 ~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~--- 209 (310)
+.+++++. .....+++++|+|+| +|++|++++++++.. |+ +|++++.+++|++.+++ .+.+.+.+...++..
T Consensus 153 la~~~~~~a~~~~~~~~~~V~V~G-aGpIGLla~~~a~~~-Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~ 230 (350)
T COG1063 153 LATAYHGHAERAAVRPGGTVVVVG-AGPIGLLAIALAKLL-GASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEI 230 (350)
T ss_pred hhhhhhhhhhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHH
Confidence 67797774 455556666999999 999999999999996 75 66777889999999988 667766665443211
Q ss_pred -cc--CCCccEEEeCCCCh---HHHHhhcccCCEEEEEeCCCCCC-ce----------EEEEe---cCHHHHHHHHHHHH
Q 021628 210 -DL--PEKFDVVFDAVGQC---DKALKAVKEGGRVVSIIGSVTPP-AS----------SFVLT---SDGSILEKLNPYFE 269 (310)
Q Consensus 210 -~~--~~~~dvvi~~~g~~---~~~~~~l~~~G~~v~~g~~~~~~-~~----------~~~~~---~~~~~~~~~~~~~~ 269 (310)
.. ..++|++|||+|+. ..+++.++++|+++.+|.+.... .+ .+... ....+++.+++++.
T Consensus 231 ~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~ 310 (350)
T COG1063 231 LELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLA 310 (350)
T ss_pred HHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHH
Confidence 11 23799999999953 79999999999999999764331 11 11111 22357999999999
Q ss_pred cCCeeEEecCCcccchhhHHHHHHHHHcCCC-CccEEEEe
Q 021628 270 SGKVKAIIDPKGPFPFSQTLEAFSHLESSRA-TGKVVIHP 308 (310)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~k~vi~~ 308 (310)
+|++++...+++.+++++++++++.+.+++. ..|+++++
T Consensus 311 ~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 311 SGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred cCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 9999988777899999999999999987654 45887753
No 41
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=3.3e-36 Score=267.11 Aligned_cols=284 Identities=27% Similarity=0.356 Sum_probs=228.9
Q ss_pred CEEEEEccc--CCC-ccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCC
Q 021628 1 MKAWVYKEY--GNS-QSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGS 77 (310)
Q Consensus 1 mka~~~~~~--g~~-~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~ 77 (310)
||+|++.++ |+. ++.++++ +.+.|+|++|||+||+.++++|+.|...... ...+|.++|+|++|+|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~-~~~~p~~~~~evlVkv~a~~in~~~~~~~~~-----~~~~p~v~G~e~~G~V~~--- 73 (329)
T cd08294 3 AKTWVLKKHFDGKPKESDFELV-EEELPPLKDGEVLCEALFLSVDPYMRPYSKR-----LNEGDTMIGTQVAKVIES--- 73 (329)
T ss_pred ceEEEEecCCCCCCCccceEEE-ecCCCCCCCCcEEEEEEEEecCHHHhccccc-----CCCCCcEecceEEEEEec---
Confidence 999999994 442 2678999 8999999999999999999999887542211 124588999999999985
Q ss_pred CCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecC---ccccCCCCCC-----hhhhccccchHHHHHHHH-Hhccc
Q 021628 78 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEEN---LLALKPKNLS-----FVEAASLPLATETAYEGL-ERSAF 148 (310)
Q Consensus 78 ~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~ip~~~~-----~~~aa~~~~~~~ta~~al-~~~~~ 148 (310)
.++++++||+|++. ++|++|++++.. .++++|++++ ...++.++++++|||+++ +..++
T Consensus 74 ~~~~~~~Gd~V~~~------------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~ 141 (329)
T cd08294 74 KNSKFPVGTIVVAS------------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKP 141 (329)
T ss_pred CCCCCCCCCEEEee------------CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCC
Confidence 44679999999873 579999999999 9999999988 233346788999999998 57889
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc-----cCCCccEEEeCCC
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVG 223 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~dvvi~~~g 223 (310)
++|++|+|+|++|++|.+++|+|+.+ |++++++++++++.+.++++|++++++++++++.. ..+++|++||++|
T Consensus 142 ~~g~~vlI~ga~g~vG~~aiqlA~~~-G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g 220 (329)
T cd08294 142 KAGETVVVNGAAGAVGSLVGQIAKIK-GCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVG 220 (329)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCCCCcEEEEECCC
Confidence 99999999999999999999999996 99999999999999999999999999887655422 2357999999988
Q ss_pred C--hHHHHhhcccCCEEEEEeCCCC---C-----C---------ceEEEEec-------CHHHHHHHHHHHHcCCeeEEe
Q 021628 224 Q--CDKALKAVKEGGRVVSIIGSVT---P-----P---------ASSFVLTS-------DGSILEKLNPYFESGKVKAII 277 (310)
Q Consensus 224 ~--~~~~~~~l~~~G~~v~~g~~~~---~-----~---------~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 277 (310)
. ...++++++++|+++.+|.... . . ..++.... ..+.++++++++.++.+++..
T Consensus 221 ~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~ 300 (329)
T cd08294 221 GEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYRE 300 (329)
T ss_pred HHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCc
Confidence 4 5789999999999999874211 0 0 01111100 123467888999999998753
Q ss_pred cCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 278 DPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 278 ~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
...|+++++++|++.+.+++..||+++++
T Consensus 301 --~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 301 --HVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred --ccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 35689999999999999999999999864
No 42
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=6.4e-36 Score=266.82 Aligned_cols=289 Identities=28% Similarity=0.362 Sum_probs=228.0
Q ss_pred EEEEEccc----CCCccceEEecc---ccCC-CCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCccccc--ceeEE
Q 021628 2 KAWVYKEY----GNSQSVLKFETN---VEVP-SLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGY--DVAGV 71 (310)
Q Consensus 2 ka~~~~~~----g~~~~~l~~~~~---~~~~-~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~--e~~G~ 71 (310)
|.|++... -++ +.++++ + .+.| ++++|||+||+.++++++.|...+.+... ...+|.++|+ |++|+
T Consensus 10 ~~~~~~~~~~~~~~~-~~f~~~-~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~--~~~~p~~~G~~~~~~G~ 85 (348)
T PLN03154 10 KQVILKNYIDGIPKE-TDMEVK-LGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD--SYLPPFVPGQRIEGFGV 85 (348)
T ss_pred eEEEEecCCCCCCCc-ccEEEE-eecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC--CCCCCcCCCCeeEeeEE
Confidence 56666322 333 568887 5 3555 35899999999999999998765443221 1235788998 88999
Q ss_pred EEEeCCCCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCc--c--ccCCCCCChh-hhccccchHHHHHHHH-Hh
Q 021628 72 VEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENL--L--ALKPKNLSFV-EAASLPLATETAYEGL-ER 145 (310)
Q Consensus 72 V~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~--~~ip~~~~~~-~aa~~~~~~~ta~~al-~~ 145 (310)
|..+|++++++++||+|++ .|+|++|..++... + +++|+++++. +++.+++++.|||+++ ..
T Consensus 86 v~~vg~~v~~~~~Gd~V~~------------~~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~ 153 (348)
T PLN03154 86 SKVVDSDDPNFKPGDLISG------------ITGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEV 153 (348)
T ss_pred EEEEecCCCCCCCCCEEEe------------cCCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHh
Confidence 9999999999999999987 36899999998753 5 4459999986 6888899999999999 56
Q ss_pred cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCCEEeeCCCC-cccc-----cCCCccEE
Q 021628 146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKE-NIED-----LPEKFDVV 218 (310)
Q Consensus 146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~-----~~~~~dvv 218 (310)
.++++|++|+|+|++|++|++++|+|+.+ |++|+++++++++++.++ ++|++.+++++++ ++.. ..+++|++
T Consensus 154 ~~~~~g~~VlV~GaaG~vG~~aiqlAk~~-G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v 232 (348)
T PLN03154 154 CSPKKGDSVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIY 232 (348)
T ss_pred cCCCCCCEEEEecCccHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEE
Confidence 88999999999998899999999999996 999999999999999987 7999999987643 3321 13479999
Q ss_pred EeCCCC--hHHHHhhcccCCEEEEEeCCCCCC--------c--------eEEEEec-------CHHHHHHHHHHHHcCCe
Q 021628 219 FDAVGQ--CDKALKAVKEGGRVVSIIGSVTPP--------A--------SSFVLTS-------DGSILEKLNPYFESGKV 273 (310)
Q Consensus 219 i~~~g~--~~~~~~~l~~~G~~v~~g~~~~~~--------~--------~~~~~~~-------~~~~~~~~~~~~~~~~~ 273 (310)
||++|. ...++++++++|+++.+|...... . ..+.... ..+.++++++++.+|++
T Consensus 233 ~d~vG~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l 312 (348)
T PLN03154 233 FDNVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKI 312 (348)
T ss_pred EECCCHHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 999984 578999999999999998643110 0 0111100 12457789999999999
Q ss_pred eEEecCCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628 274 KAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPI 309 (310)
Q Consensus 274 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~ 309 (310)
++.+ ...|+++++++|++.+.+++..||++|++.
T Consensus 313 ~~~~--~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~ 346 (348)
T PLN03154 313 VYIE--DMSEGLESAPAALVGLFSGKNVGKQVIRVA 346 (348)
T ss_pred cCce--ecccCHHHHHHHHHHHHcCCCCceEEEEec
Confidence 8753 467999999999999999999999999875
No 43
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=2.4e-36 Score=269.18 Aligned_cols=300 Identities=21% Similarity=0.267 Sum_probs=236.7
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||+++.+++. ++++ +.+.|.++++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|+++.
T Consensus 1 m~a~~~~~~~~----~~~~-~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~--~~~p~i~G~e~~G~V~~vG~~v~ 73 (339)
T PRK10083 1 MKSIVIEKPNS----LAIE-ERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPF--AKYPRVIGHEFFGVIDAVGEGVD 73 (339)
T ss_pred CeEEEEecCCe----eEEE-eccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCc--CCCCcccccceEEEEEEECCCCc
Confidence 99999998775 4899 89999999999999999999999999998886532 24688999999999999999999
Q ss_pred CCCCCCeeEeecCccccC------------------CCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628 81 KFKVGDEVYGDINEKALD------------------HPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (310)
.+++||+|+..+...... +....|+|++|+.++...++++|++++++.++ +...+.+++++
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~ 152 (339)
T PRK10083 74 AARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANV 152 (339)
T ss_pred cCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHH
Confidence 999999998532110000 11235899999999999999999999998876 44567788876
Q ss_pred HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCccccc----CCCccE
Q 021628 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIEDL----PEKFDV 217 (310)
Q Consensus 143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~dv 217 (310)
....++++|++|+|+| +|.+|++++++|+.+.|++ ++++++++++.+.++++|++.+++.+..++... ..++|+
T Consensus 153 ~~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~g~~~d~ 231 (339)
T PRK10083 153 TGRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEEKGIKPTL 231 (339)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhcCCCCCCE
Confidence 6788999999999999 8999999999999623886 556677899999999999999988765433221 124579
Q ss_pred EEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC----------ceEEE-EecCHHHHHHHHHHHHcCCeeEEecCCccc
Q 021628 218 VFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFV-LTSDGSILEKLNPYFESGKVKAIIDPKGPF 283 (310)
Q Consensus 218 vi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (310)
+||++|. ...++++++++|+++.+|....+. .+.+. .......++++++++.++.+++...+++.|
T Consensus 232 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 311 (339)
T PRK10083 232 IIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRLNANKFPVVIDWLSKGLIDPEKLITHTF 311 (339)
T ss_pred EEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEecChhhHHHHHHHHHcCCCChHHheeeee
Confidence 9999883 588999999999999998543111 11111 112346788999999999988643346889
Q ss_pred chhhHHHHHHHHHcCC-CCccEEEEeC
Q 021628 284 PFSQTLEAFSHLESSR-ATGKVVIHPI 309 (310)
Q Consensus 284 ~~~~~~~a~~~~~~~~-~~~k~vi~~~ 309 (310)
+++++++|++.+.++. ..+|+++++.
T Consensus 312 ~l~~~~~a~~~~~~~~~~~~kvvv~~~ 338 (339)
T PRK10083 312 DFQHVADAIELFEKDQRHCCKVLLTFA 338 (339)
T ss_pred cHHHHHHHHHHHhcCCCceEEEEEecC
Confidence 9999999999987653 5689998764
No 44
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8.1e-36 Score=266.86 Aligned_cols=303 Identities=32% Similarity=0.448 Sum_probs=242.1
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCC------------------CCCCCCc
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA------------------TDSPLPT 62 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~------------------~~~~~p~ 62 (310)
||++++..++.+ +.+++..+.+.|++.+++|+||+.++++|++|++.+.|.++. ....+|.
T Consensus 1 ~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 79 (350)
T cd08274 1 MRAVLLTGHGGL-DKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPR 79 (350)
T ss_pred CeEEEEeccCCc-cceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCc
Confidence 899999988776 667776234777889999999999999999999988776431 1345788
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCeeEeecCcccc----------CCCCCCCcceeEEEEecCccccCCCCCChhhhccc
Q 021628 63 IPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKAL----------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL 132 (310)
Q Consensus 63 ~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~~~~----------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~ 132 (310)
++|||++|+|+++|+++..+++||+|++.+..... .+....|++++|+.++...++++|+++++.+++.+
T Consensus 80 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l 159 (350)
T cd08274 80 IQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATF 159 (350)
T ss_pred ccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhc
Confidence 99999999999999999999999999885321110 11123589999999999999999999999999999
Q ss_pred cchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc---
Q 021628 133 PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE--- 209 (310)
Q Consensus 133 ~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--- 209 (310)
++++.|||+++...++++|++|+|+|++|.+|++++++|+.+ |++++.+++++ +++.++++|++.+.+.......
T Consensus 160 ~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~-g~~vi~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~ 237 (350)
T cd08274 160 PCSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRR-GAIVIAVAGAA-KEEAVRALGADTVILRDAPLLADAK 237 (350)
T ss_pred ccHHHHHHHHHhhcCCCCCCEEEEEcCCcHHHHHHHHHHHhc-CCEEEEEeCch-hhHHHHhcCCeEEEeCCCccHHHHH
Confidence 999999999997788999999999998899999999999996 99998888765 8888889998766554332211
Q ss_pred -ccCCCccEEEeCCCC--hHHHHhhcccCCEEEEEeCCCCC-----------CceEEEE--ecCHHHHHHHHHHHHcCCe
Q 021628 210 -DLPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP-----------PASSFVL--TSDGSILEKLNPYFESGKV 273 (310)
Q Consensus 210 -~~~~~~dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~--~~~~~~~~~~~~~~~~~~~ 273 (310)
...+++|++||++|. ...++++++++|+++.+|..... .+..+.. ......+.++++++.++.+
T Consensus 238 ~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 317 (350)
T cd08274 238 ALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGTREVFRRLVRYIEEGEI 317 (350)
T ss_pred hhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCCHHHHHHHHHHHHCCCc
Confidence 123579999999884 57899999999999998743211 1111111 1235678999999999998
Q ss_pred eEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 274 KAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 274 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
++. +++.|++++++++++.+..+...+|+++++
T Consensus 318 ~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 318 RPV--VAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred ccc--cccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 764 468899999999999999888888988753
No 45
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=4.4e-35 Score=259.24 Aligned_cols=296 Identities=31% Similarity=0.426 Sum_probs=244.6
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCC-CCCCCcccccceeEEEEEeCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSAT-DSPLPTIPGYDVAGVVEKVGSQV 79 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~~g~~~ 79 (310)
|||+++++++.+ ..+++. +.+.|.+.+++|+||+.++++|++|+....|..+.. ...+|.++|||++|+|+++|+++
T Consensus 1 ~~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v 78 (324)
T cd08244 1 MRAIRLHEFGPP-EVLVPE-DVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGV 78 (324)
T ss_pred CeEEEEcCCCCc-cceEEe-ccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCC
Confidence 999999988876 778887 787788899999999999999999999888764321 23457889999999999999999
Q ss_pred CCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEcC
Q 021628 80 KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG 159 (310)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~ 159 (310)
..+++||+|++... ...|+|++|+.++...++++|+++++.+++.+++.++|||..++..+++++++|+|+|+
T Consensus 79 ~~~~~Gd~V~~~~~-------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vlI~g~ 151 (324)
T cd08244 79 DPAWLGRRVVAHTG-------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGLLDLATLTPGDVVLVTAA 151 (324)
T ss_pred CCCCCCCEEEEccC-------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 99999999998641 13589999999999999999999999999999999999965557889999999999999
Q ss_pred CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhh
Q 021628 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKA 231 (310)
Q Consensus 160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~ 231 (310)
+|.+|++++++|+.+ |++++++++++++.+.++++|.+++++.++.++.. ..+++|+++|++|. ...++++
T Consensus 152 ~~~~g~~~~~la~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~ 230 (324)
T cd08244 152 AGGLGSLLVQLAKAA-GATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALAL 230 (324)
T ss_pred CchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChHhHHHHHHH
Confidence 999999999999996 99999999999999999999998888766543211 12479999999884 4789999
Q ss_pred cccCCEEEEEeCCCCC-----------CceEEEE---e-c----CHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHH
Q 021628 232 VKEGGRVVSIIGSVTP-----------PASSFVL---T-S----DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAF 292 (310)
Q Consensus 232 l~~~G~~v~~g~~~~~-----------~~~~~~~---~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 292 (310)
++++|+++.+|..... ....+.. . . ..+.+.++++++.++.+... +.+.|+++++++++
T Consensus 231 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~ 308 (324)
T cd08244 231 LAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPV--VGQTFPLERAAEAH 308 (324)
T ss_pred hccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCc--cceEEeHHHHHHHH
Confidence 9999999999864311 1111111 0 0 13567788999999988753 56789999999999
Q ss_pred HHHHcCCCCccEEEEe
Q 021628 293 SHLESSRATGKVVIHP 308 (310)
Q Consensus 293 ~~~~~~~~~~k~vi~~ 308 (310)
+.+.++...+|+++++
T Consensus 309 ~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 309 AALEARSTVGKVLLLP 324 (324)
T ss_pred HHHHcCCCCceEEEeC
Confidence 9999988889998864
No 46
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=1.6e-35 Score=268.03 Aligned_cols=299 Identities=27% Similarity=0.349 Sum_probs=238.4
Q ss_pred CEEEEEcccCCCccceEEeccccCCCC-CCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~ 79 (310)
|||+++.+++++ +++ +.|.|.+ .+++|+||+.++++|++|+..+.|.++. ..+|.++|||++|+|+++|+++
T Consensus 1 m~a~~~~~~~~~----~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~p~~~G~e~~G~V~~vG~~v 73 (386)
T cd08283 1 MKALVWHGKGDV----RVE-EVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG--MKKGDILGHEFMGVVEEVGPEV 73 (386)
T ss_pred CeeEEEecCCCc----eEE-eCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC--CCCCccccccceEEEEEeCCCC
Confidence 999999976554 888 8999988 5999999999999999999999997743 3568899999999999999999
Q ss_pred CCCCCCCeeEeecCcc-----------------------------c----cC-----CCCCCCcceeEEEEecC--cccc
Q 021628 80 KKFKVGDEVYGDINEK-----------------------------A----LD-----HPKRNGSLAEYTAVEEN--LLAL 119 (310)
Q Consensus 80 ~~~~~Gd~V~~~~~~~-----------------------------~----~~-----~~~~~g~~~~~~~~~~~--~~~~ 119 (310)
.++++||+|++.+... + .. .....|+|++|++++.+ .+++
T Consensus 74 ~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~ 153 (386)
T cd08283 74 RNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFK 153 (386)
T ss_pred CCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEE
Confidence 9999999998853100 0 00 00136899999999987 8999
Q ss_pred CCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCC
Q 021628 120 KPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD 198 (310)
Q Consensus 120 ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~ 198 (310)
+|+++++++++.+++.+++||++++..++.+|++|+|+| +|.+|.+++++|+.. |. +++++++++++.+.+++++..
T Consensus 154 lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g-~G~vG~~~~~la~~~-g~~~vi~~~~~~~~~~~~~~~~~~ 231 (386)
T cd08283 154 IPDDLSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWG-CGPVGLFAARSAKLL-GAERVIAIDRVPERLEMARSHLGA 231 (386)
T ss_pred CCCCCCHHHHhhhccchhhhHHHHhhccCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCc
Confidence 999999999999999999999999778899999999997 799999999999996 87 488888999999999988434
Q ss_pred EEeeCCCCc-ccc----c--CCCccEEEeCCCC------------------------hHHHHhhcccCCEEEEEeCCCC-
Q 021628 199 LAIDYTKEN-IED----L--PEKFDVVFDAVGQ------------------------CDKALKAVKEGGRVVSIIGSVT- 246 (310)
Q Consensus 199 ~~~~~~~~~-~~~----~--~~~~dvvi~~~g~------------------------~~~~~~~l~~~G~~v~~g~~~~- 246 (310)
.+++....+ +.. . .+++|++||++|. .+.++++++++|+++.+|....
T Consensus 232 ~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~ 311 (386)
T cd08283 232 ETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGT 311 (386)
T ss_pred EEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCC
Confidence 566655432 211 1 2379999999852 4778999999999999986432
Q ss_pred CC----------ceEEEE--ecCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCC-CCccEEEEe
Q 021628 247 PP----------ASSFVL--TSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSR-ATGKVVIHP 308 (310)
Q Consensus 247 ~~----------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~k~vi~~ 308 (310)
.. ...+.. ......+..+++++.++++.+....++.|+++++++|++.+.++. ..+|++|++
T Consensus 312 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 312 VNKFPIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred cCccCHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 11 111111 112456888999999999886433467899999999999988876 457988853
No 47
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=2e-35 Score=263.49 Aligned_cols=296 Identities=27% Similarity=0.361 Sum_probs=240.5
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCC-CcEEEEEeEeecCHHHHHHHhCCCCCCCC---CCCcccccceeEEEEEeC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLRE-DQVLIKVVAAALNPIDFKRMLGAFSATDS---PLPTIPGYDVAGVVEKVG 76 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~-~eV~V~v~~~~i~~~d~~~~~g~~~~~~~---~~p~~~G~e~~G~V~~~g 76 (310)
|||++++.++.+.+.++++ +.|.|++.+ ++|+||+.++++|++|+..+.|..+.... .+|.++|||++|+|+++|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG 79 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLE-SYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVG 79 (341)
T ss_pred CceEEEccCCCchhheEEe-ecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeC
Confidence 9999999998753467888 899998887 99999999999999999998886532111 157789999999999999
Q ss_pred CCCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hcccCCCCEEE
Q 021628 77 SQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSIL 155 (310)
Q Consensus 77 ~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vl 155 (310)
+++..+++||+|++... ..|+|++|+.++...++++|+++++++++.+++.+.|||+++. ...+++|++|+
T Consensus 80 ~~v~~~~~Gd~V~~~~~--------~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vl 151 (341)
T cd08290 80 SGVKSLKPGDWVIPLRP--------GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVI 151 (341)
T ss_pred CCCCCCCCCCEEEecCC--------CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEE
Confidence 99999999999998641 2589999999999999999999999999999999999999984 57889999999
Q ss_pred EEcCCcchHHHHHHHHHhhcCCcEEEEecCh----hhHHHHHHcCCCEEeeCCCC---cccc-----cCCCccEEEeCCC
Q 021628 156 VLGGAGGVGTMVIQLAKHVFGASKVAATSST----AKLDLLRSLGADLAIDYTKE---NIED-----LPEKFDVVFDAVG 223 (310)
Q Consensus 156 I~g~~g~~G~~a~~la~~~~g~~vi~~~~~~----~~~~~~~~~g~~~~~~~~~~---~~~~-----~~~~~dvvi~~~g 223 (310)
|+|++|.+|++++++|+.. |.+++++++++ ++.+.++++|++++++.+.. +... ..+++|++|||+|
T Consensus 152 I~g~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g 230 (341)
T cd08290 152 QNGANSAVGQAVIQLAKLL-GIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVG 230 (341)
T ss_pred EccchhHHHHHHHHHHHHc-CCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcC
Confidence 9998899999999999996 99999888765 66888888999998876543 2211 1127999999988
Q ss_pred C--hHHHHhhcccCCEEEEEeCCCC-----------CCceEEEEec--------CH----HHHHHHHHHHHcCCeeEEec
Q 021628 224 Q--CDKALKAVKEGGRVVSIIGSVT-----------PPASSFVLTS--------DG----SILEKLNPYFESGKVKAIID 278 (310)
Q Consensus 224 ~--~~~~~~~l~~~G~~v~~g~~~~-----------~~~~~~~~~~--------~~----~~~~~~~~~~~~~~~~~~~~ 278 (310)
. ....+++++++|+++.+|.... .....+.... .. ..+..+++++.++.+.+..
T Consensus 231 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~- 309 (341)
T cd08290 231 GKSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPP- 309 (341)
T ss_pred cHhHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCc-
Confidence 4 4678999999999999975321 1112222110 11 2477888999999987642
Q ss_pred CCccc---chhhHHHHHHHHHcCCCCccEEEEe
Q 021628 279 PKGPF---PFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 279 ~~~~~---~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
...+ ++++++++++.+.++...+|+++++
T Consensus 310 -~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 310 -VEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred -ccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 3455 9999999999999888888999864
No 48
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=1.4e-35 Score=267.14 Aligned_cols=298 Identities=25% Similarity=0.310 Sum_probs=235.1
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
||++++.++++. ++++ +.|.|++.++||+||+.++++|++|++.+.|.++ ..+|.++|||++|+|+++|+++.
T Consensus 8 ~~a~~~~~~~~~---~~l~-~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~---~~~p~v~G~e~~G~V~~vG~~v~ 80 (373)
T cd08299 8 CKAAVLWEPKKP---FSIE-EIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV---TPFPVILGHEAAGIVESVGEGVT 80 (373)
T ss_pred eEEEEEecCCCC---cEEE-EeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC---CCCCccccccceEEEEEeCCCCc
Confidence 789999987765 6888 8999999999999999999999999999988752 35688999999999999999999
Q ss_pred CCCCCCeeEeecCc------------------ccc---------------------CCCCCCCcceeEEEEecCccccCC
Q 021628 81 KFKVGDEVYGDINE------------------KAL---------------------DHPKRNGSLAEYTAVEENLLALKP 121 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~------------------~~~---------------------~~~~~~g~~~~~~~~~~~~~~~ip 121 (310)
.+++||+|+..+.. ... ......|+|++|++++...++++|
T Consensus 81 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP 160 (373)
T cd08299 81 TVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKID 160 (373)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCC
Confidence 99999999875210 000 000125899999999999999999
Q ss_pred CCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCE
Q 021628 122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADL 199 (310)
Q Consensus 122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~ 199 (310)
+++++++++.+.+++.+||+++ ..+++++|++|+|+| +|++|++++++|+.+ |+ +|+++++++++++.++++|+++
T Consensus 161 ~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~~~~~a~~~-G~~~Vi~~~~~~~~~~~a~~lGa~~ 238 (373)
T cd08299 161 AAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSAIMGCKAA-GASRIIAVDINKDKFAKAKELGATE 238 (373)
T ss_pred CCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCce
Confidence 9999999999999999999987 578899999999997 799999999999996 88 7999999999999999999988
Q ss_pred EeeCCCCc--cc-----ccCCCccEEEeCCCC---hHHHHhh-cccCCEEEEEeCCCCCCc-----------eEEEEe--
Q 021628 200 AIDYTKEN--IE-----DLPEKFDVVFDAVGQ---CDKALKA-VKEGGRVVSIIGSVTPPA-----------SSFVLT-- 255 (310)
Q Consensus 200 ~~~~~~~~--~~-----~~~~~~dvvi~~~g~---~~~~~~~-l~~~G~~v~~g~~~~~~~-----------~~~~~~-- 255 (310)
+++..+.+ .. ...+++|+++||+|. ...++.. ++++|+++.+|....... ..+...
T Consensus 239 ~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~ 318 (373)
T cd08299 239 CINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVF 318 (373)
T ss_pred EecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHHhcCCeEEEEEe
Confidence 88765322 11 112479999999884 3555554 467999999986432111 111110
Q ss_pred ---cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 256 ---SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 256 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
.....+.++++.+.++.+++...+++.|+++++++|++.+.+++.. |.++++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~-k~~~~~ 373 (373)
T cd08299 319 GGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSI-RTVLTF 373 (373)
T ss_pred cCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcc-eEEEeC
Confidence 1124566777878777765543467899999999999998877654 777754
No 49
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=3.3e-35 Score=260.34 Aligned_cols=281 Identities=26% Similarity=0.372 Sum_probs=225.0
Q ss_pred EEEEEcc----cCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCC
Q 021628 2 KAWVYKE----YGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGS 77 (310)
Q Consensus 2 ka~~~~~----~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~ 77 (310)
|.|++.+ ...+ +.++++ +.|.|++++|||+|||.++++|+.+. .|.++ ....|.++|.|++|+|++.|+
T Consensus 2 ~~~~~~~~~~~~~~~-~~l~~~-~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~~--~~~~~~i~G~~~~g~v~~~~~ 74 (325)
T TIGR02825 2 KTWTLKKHFVGYPTD-SDFELK-TVELPPLNNGEVLLEALFLSVDPYMR---VAAKR--LKEGDTMMGQQVARVVESKNV 74 (325)
T ss_pred cEEEEecCCCCCCCC-CceEEE-eccCCCCCCCcEEEEEEEEecCHHHh---cccCc--CCCCCcEecceEEEEEEeCCC
Confidence 4455543 2344 678888 89999999999999999999999654 34332 123477999999999999764
Q ss_pred CCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccC----CCCCChhhh-ccccchHHHHHHHH-HhcccCCC
Q 021628 78 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK----PKNLSFVEA-ASLPLATETAYEGL-ERSAFSAG 151 (310)
Q Consensus 78 ~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i----p~~~~~~~a-a~~~~~~~ta~~al-~~~~~~~g 151 (310)
++++||+|++. ++|++|+.++.+.+.++ |++++++++ +++++++.|||+++ +.+++++|
T Consensus 75 ---~~~~GdrV~~~------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g 139 (325)
T TIGR02825 75 ---ALPKGTIVLAS------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGG 139 (325)
T ss_pred ---CCCCCCEEEEe------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCC
Confidence 59999999984 46999999998887777 899999987 67899999999998 67899999
Q ss_pred CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCC-cccc-----cCCCccEEEeCCCC-
Q 021628 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE-NIED-----LPEKFDVVFDAVGQ- 224 (310)
Q Consensus 152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~-----~~~~~dvvi~~~g~- 224 (310)
++|+|+|++|++|++++|+|+.. |++|+++++++++.+.++++|++.++++++. .+.. ..+++|++||++|.
T Consensus 140 ~~VLI~ga~g~vG~~aiqlAk~~-G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~ 218 (325)
T TIGR02825 140 ETVMVNAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGE 218 (325)
T ss_pred CEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHH
Confidence 99999999999999999999996 9999999999999999999999999987653 3221 13479999999984
Q ss_pred -hHHHHhhcccCCEEEEEeCCC-------CCC----------ceEEEEec--------CHHHHHHHHHHHHcCCeeEEec
Q 021628 225 -CDKALKAVKEGGRVVSIIGSV-------TPP----------ASSFVLTS--------DGSILEKLNPYFESGKVKAIID 278 (310)
Q Consensus 225 -~~~~~~~l~~~G~~v~~g~~~-------~~~----------~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 278 (310)
...++++++++|+++.+|... .+. ...+.... ..+.++++++++.++++++..
T Consensus 219 ~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~- 297 (325)
T TIGR02825 219 FSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKE- 297 (325)
T ss_pred HHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccce-
Confidence 588999999999999997532 010 11111100 134578899999999998753
Q ss_pred CCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628 279 PKGPFPFSQTLEAFSHLESSRATGKVVIH 307 (310)
Q Consensus 279 ~~~~~~~~~~~~a~~~~~~~~~~~k~vi~ 307 (310)
...|+++++++|++.+.+++..||++++
T Consensus 298 -~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 298 -YVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred -eccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 3568999999999999999988999874
No 50
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=4.4e-35 Score=261.25 Aligned_cols=300 Identities=28% Similarity=0.403 Sum_probs=244.9
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||+++..++ . ..++++ +.+.|.+.++||+||+.++++|++|...+.+.++. +...|..+|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~-~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~V~~vG~~~~ 76 (341)
T cd08297 1 MKAAVVEEFG-E-KPYEVK-DVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPV-KPKLPLIGGHEGAGVVVAVGPGVS 76 (341)
T ss_pred CceEEeeccC-C-CCceEE-EeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCc-CCCCCccCCcccceEEEEeCCCCC
Confidence 9999999887 2 446898 89999999999999999999999999998887642 234567899999999999999999
Q ss_pred CCCCCCeeEeecC---------------ccc----cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628 81 KFKVGDEVYGDIN---------------EKA----LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (310)
Q Consensus 81 ~~~~Gd~V~~~~~---------------~~~----~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 141 (310)
.+++||+|+..+. +.+ ..+....|++++|+.++.+.++++|+++++.+++.+++.+.|||+
T Consensus 77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~ 156 (341)
T cd08297 77 GLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYK 156 (341)
T ss_pred CCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHH
Confidence 9999999987521 000 001113689999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCc
Q 021628 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKF 215 (310)
Q Consensus 142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~ 215 (310)
++...+++++++|+|+|+.+.+|++++++|+.+ |.+++++++++++.+.++++|.+.+++..+.+... ..+++
T Consensus 157 ~~~~~~~~~~~~vlV~g~~~~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~v 235 (341)
T cd08297 157 ALKKAGLKPGDWVVISGAGGGLGHLGVQYAKAM-GLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGA 235 (341)
T ss_pred HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCCCC
Confidence 996668999999999998888999999999996 99999999999999999999998888776543211 13579
Q ss_pred cEEEeCCC---ChHHHHhhcccCCEEEEEeCCCCC-----------CceEEEEec--CHHHHHHHHHHHHcCCeeEEecC
Q 021628 216 DVVFDAVG---QCDKALKAVKEGGRVVSIIGSVTP-----------PASSFVLTS--DGSILEKLNPYFESGKVKAIIDP 279 (310)
Q Consensus 216 dvvi~~~g---~~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 279 (310)
|+++|+.+ ....++++++++|+++.+|..... ....+.... ..++++++++++.++.+.+.
T Consensus 236 d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--- 312 (341)
T cd08297 236 HAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVKPH--- 312 (341)
T ss_pred CEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCCcce---
Confidence 99999765 247889999999999999854311 111111111 25788999999999998753
Q ss_pred CcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 280 KGPFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 280 ~~~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
.+.|++++++++++.+..+...+|++++|
T Consensus 313 ~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 313 IQVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred eEEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 25699999999999999998889999875
No 51
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=3.1e-35 Score=261.65 Aligned_cols=295 Identities=32% Similarity=0.479 Sum_probs=238.5
Q ss_pred EEEEEccc---CCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCC
Q 021628 2 KAWVYKEY---GNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ 78 (310)
Q Consensus 2 ka~~~~~~---g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~ 78 (310)
||+++..+ |++ +.+++. +.|.|+++++||+||+.++++|++|.....+..+ ...+|.++|+|++|+|+++|++
T Consensus 1 ~~~~~~~~~~~~~~-~~~~~~-~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~--~~~~~~~~g~e~~G~V~~vG~~ 76 (336)
T TIGR02817 1 KAVGYKKPLPITDP-DALVDI-DLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAP--EAGQPKILGWDAAGVVVAVGDE 76 (336)
T ss_pred CceeeccccCCCCc-ccceec-ccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCC--CCCCCcccceeeEEEEEEeCCC
Confidence 68899987 776 788988 8999999999999999999999999998877543 2346788999999999999999
Q ss_pred CCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCC-----CC
Q 021628 79 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSA-----GK 152 (310)
Q Consensus 79 ~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~-----g~ 152 (310)
++.+++||+|++... ....|+|++|+.++.+.++++|+++++++++.++++++|||+++ ...++++ |+
T Consensus 77 v~~~~~Gd~V~~~~~------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~ 150 (336)
T TIGR02817 77 VTLFKPGDEVWYAGD------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKR 150 (336)
T ss_pred CCCCCCCCEEEEcCC------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 999999999988531 11258999999999999999999999999999999999999998 5677776 99
Q ss_pred EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc-----cCCCccEEEeCCC---C
Q 021628 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVG---Q 224 (310)
Q Consensus 153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~dvvi~~~g---~ 224 (310)
+|+|+|++|.+|++++++|+.++|++|+++++++++.+.++++|++++++++. ++.. ..+++|+++|+.+ .
T Consensus 151 ~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~i~~~~~~~vd~vl~~~~~~~~ 229 (336)
T TIGR02817 151 ALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-PLKAQLEKLGLEAVSYVFSLTHTDQH 229 (336)
T ss_pred EEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC-CHHHHHHHhcCCCCCEEEEcCCcHHH
Confidence 99999999999999999999833899999999999999999999999887543 2211 1247999999874 3
Q ss_pred hHHHHhhcccCCEEEEEeCCCC------C-CceEEE---Ee--c---C------HHHHHHHHHHHHcCCeeEEec-CCcc
Q 021628 225 CDKALKAVKEGGRVVSIIGSVT------P-PASSFV---LT--S---D------GSILEKLNPYFESGKVKAIID-PKGP 282 (310)
Q Consensus 225 ~~~~~~~l~~~G~~v~~g~~~~------~-~~~~~~---~~--~---~------~~~~~~~~~~~~~~~~~~~~~-~~~~ 282 (310)
....+++++++|+++.++.... . ....+. .. . . ...++++++++.++.+++.+. ....
T Consensus 230 ~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~ 309 (336)
T TIGR02817 230 FKEIVELLAPQGRFALIDDPAELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGT 309 (336)
T ss_pred HHHHHHHhccCCEEEEEcccccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccCC
Confidence 5889999999999998854210 0 112111 10 0 0 145788999999999876421 1123
Q ss_pred cchhhHHHHHHHHHcCCCCccEEEE
Q 021628 283 FPFSQTLEAFSHLESSRATGKVVIH 307 (310)
Q Consensus 283 ~~~~~~~~a~~~~~~~~~~~k~vi~ 307 (310)
++++++++|++.+.+++..+|++++
T Consensus 310 ~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 310 INAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred CCHHHHHHHHHHHHcCCccceEEEe
Confidence 4579999999999999888898875
No 52
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=2.2e-35 Score=263.22 Aligned_cols=298 Identities=24% Similarity=0.319 Sum_probs=237.9
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCC---------CCCCCCCcccccceeEE
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFS---------ATDSPLPTIPGYDVAGV 71 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~---------~~~~~~p~~~G~e~~G~ 71 (310)
|||++++++ . ++++ +.+.|+++++||+||+.++++|++|+....|... .....+|.++|+|++|+
T Consensus 1 m~a~~~~~~-~----~~~~-~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~ 74 (341)
T cd08262 1 MRAAVFRDG-P----LVVR-DVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGE 74 (341)
T ss_pred CceEEEeCC-c----eEEE-ecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEE
Confidence 999999876 3 6888 8999999999999999999999999998887321 01223578899999999
Q ss_pred EEEeCCCCCC-CCCCCeeEeecCccccCCC--------CCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628 72 VEKVGSQVKK-FKVGDEVYGDINEKALDHP--------KRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (310)
Q Consensus 72 V~~~g~~~~~-~~~Gd~V~~~~~~~~~~~~--------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (310)
|+++|+++++ +++||+|++.+...+..+. ...|+|++|+.++.+.++++|+++++++++ +++.+.+||++
T Consensus 75 V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~ 153 (341)
T cd08262 75 VVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHA 153 (341)
T ss_pred EEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHH
Confidence 9999999987 9999999987432222111 136899999999999999999999998876 66788899998
Q ss_pred HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcE-EEEecChhhHHHHHHcCCCEEeeCCCCcc--------c-ccC
Q 021628 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK-VAATSSTAKLDLLRSLGADLAIDYTKENI--------E-DLP 212 (310)
Q Consensus 143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~v-i~~~~~~~~~~~~~~~g~~~~~~~~~~~~--------~-~~~ 212 (310)
+..+++++|++|+|+| +|.+|.+++++|+.+ |+++ ++++.++++.+.++++|++++++++..+. . ...
T Consensus 154 ~~~~~~~~g~~VlI~g-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ 231 (341)
T cd08262 154 VRRARLTPGEVALVIG-CGPIGLAVIAALKAR-GVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGG 231 (341)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCC
Confidence 8788999999999998 699999999999996 8874 55566889999999999988888654421 0 113
Q ss_pred CCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCC----------CceEE--EEecCHHHHHHHHHHHHcCCeeEEe
Q 021628 213 EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP----------PASSF--VLTSDGSILEKLNPYFESGKVKAII 277 (310)
Q Consensus 213 ~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~----------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (310)
+++|++||++|. ...++++++++|+++.+|..... ....+ ......+.+.++++++.++.+.+..
T Consensus 232 ~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~ 311 (341)
T cd08262 232 PKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFADALDALAEGKVDVAP 311 (341)
T ss_pred CCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHHHHHHHHHcCCCChHH
Confidence 469999999874 47889999999999999854211 11122 1223456788999999999998643
Q ss_pred cCCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628 278 DPKGPFPFSQTLEAFSHLESSRATGKVVIH 307 (310)
Q Consensus 278 ~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~ 307 (310)
.+++.|++++++++++.+.+++..+|++++
T Consensus 312 ~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 312 MVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred heEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 346789999999999999999888898874
No 53
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=6.3e-35 Score=258.95 Aligned_cols=291 Identities=28% Similarity=0.382 Sum_probs=241.4
Q ss_pred CEEEEEcccCC--CccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCC
Q 021628 1 MKAWVYKEYGN--SQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ 78 (310)
Q Consensus 1 mka~~~~~~g~--~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~ 78 (310)
||++++.+++. . +.++++ +.+.|.+.++||+||+.++++|++|+....|.++.. ..+|.++|||++|+|+.+|++
T Consensus 2 ~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~-~~~p~~~g~e~~G~v~~vG~~ 78 (329)
T cd08250 2 FRKLVVHRLSPNFR-EATSIV-DVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPG-VKPPFDCGFEGVGEVVAVGEG 78 (329)
T ss_pred ceEEEeccCCCCcc-cCceEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCC-CCCCcccCceeEEEEEEECCC
Confidence 99999999888 6 778899 899999999999999999999999999888865322 357889999999999999999
Q ss_pred CCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEE
Q 021628 79 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVL 157 (310)
Q Consensus 79 ~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ 157 (310)
++.+++||+|++.. .|+|++|+.++.+.++++|++. .+++.+++++.+||+++ +..++++|++|+|+
T Consensus 79 v~~~~~Gd~V~~~~----------~g~~~s~~~v~~~~~~~ip~~~--~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ 146 (329)
T cd08250 79 VTDFKVGDAVATMS----------FGAFAEYQVVPARHAVPVPELK--PEVLPLLVSGLTASIALEEVGEMKSGETVLVT 146 (329)
T ss_pred CCCCCCCCEEEEec----------CcceeEEEEechHHeEECCCCc--chhhhcccHHHHHHHHHHHhcCCCCCCEEEEE
Confidence 99999999999864 4899999999999999999973 46778889999999998 46789999999999
Q ss_pred cCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc-----ccCCCccEEEeCCCC--hHHHHh
Q 021628 158 GGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE-----DLPEKFDVVFDAVGQ--CDKALK 230 (310)
Q Consensus 158 g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~dvvi~~~g~--~~~~~~ 230 (310)
|++|.+|++++++++.. |.+++++++++++.+.++++|.+.+++.+..+.. ...+++|++||+.|. ...+++
T Consensus 147 ga~g~ig~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~~~~~~~~~ 225 (329)
T cd08250 147 AAAGGTGQFAVQLAKLA-GCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGEMFDTCVD 225 (329)
T ss_pred eCccHHHHHHHHHHHHc-CCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcHHHHHHHHH
Confidence 99999999999999996 9999999999999999999998888876543321 113579999999874 578899
Q ss_pred hcccCCEEEEEeCCCCC--------------------CceEEEEec-------CHHHHHHHHHHHHcCCeeEEecCCccc
Q 021628 231 AVKEGGRVVSIIGSVTP--------------------PASSFVLTS-------DGSILEKLNPYFESGKVKAIIDPKGPF 283 (310)
Q Consensus 231 ~l~~~G~~v~~g~~~~~--------------------~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (310)
+++++|+++.+|..... ....+.... ..+.+.++++++.++.+.+.....+.+
T Consensus 226 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 305 (329)
T cd08250 226 NLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFR 305 (329)
T ss_pred HhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCcccc
Confidence 99999999999754210 111111111 134577889999999998754456679
Q ss_pred chhhHHHHHHHHHcCCCCccEEEE
Q 021628 284 PFSQTLEAFSHLESSRATGKVVIH 307 (310)
Q Consensus 284 ~~~~~~~a~~~~~~~~~~~k~vi~ 307 (310)
+++++++|++.+.++...+|++++
T Consensus 306 ~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 306 GLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred CHHHHHHHHHHHHcCCCCceEEeC
Confidence 999999999999988887888763
No 54
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=1.9e-35 Score=264.09 Aligned_cols=299 Identities=24% Similarity=0.310 Sum_probs=239.0
Q ss_pred CEEEEEcccCCCccceEEeccccCCCC-CCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~ 79 (310)
||++++.+++++ +++ +.|.|++ .++||+||+.++++|++|+..+.|.++. ..+|.++|||++|+|+++|+++
T Consensus 1 m~a~~~~~~~~~----~~~-~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~V~~~G~~v 73 (345)
T cd08286 1 MKALVYHGPGKI----SWE-DRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT--VTPGRILGHEGVGVVEEVGSAV 73 (345)
T ss_pred CceEEEecCCce----eEE-ecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC--CCCCceecccceEEEEEeccCc
Confidence 999999987765 888 8999886 8999999999999999999999887642 3457899999999999999999
Q ss_pred CCCCCCCeeEeecCcc-------------------ccCCCCCCCcceeEEEEecC--ccccCCCCCChhhhccccchHHH
Q 021628 80 KKFKVGDEVYGDINEK-------------------ALDHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLATET 138 (310)
Q Consensus 80 ~~~~~Gd~V~~~~~~~-------------------~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~t 138 (310)
..+++||+|++.+... +..+....|+|++|+.++.+ .++++|++++..+++.+++.+++
T Consensus 74 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~t 153 (345)
T cd08286 74 TNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPT 153 (345)
T ss_pred cccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHH
Confidence 9999999998854210 00011224899999999987 89999999999999999999999
Q ss_pred HHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------
Q 021628 139 AYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------ 210 (310)
Q Consensus 139 a~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------ 210 (310)
||+++ ...++.+|++|+|.| +|.+|.+++++|+.+ | .+++++++++++.+.++++|++.+++..+.++..
T Consensus 154 a~~~~~~~~~~~~g~~vlI~g-~g~~g~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~ 231 (345)
T cd08286 154 GYECGVLNGKVKPGDTVAIVG-AGPVGLAALLTAQLY-SPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELT 231 (345)
T ss_pred HHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHHHHh
Confidence 99876 577899999999988 699999999999996 8 7888887888899998999998888876544221
Q ss_pred cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC----------ceEEEEe-cCHHHHHHHHHHHHcCCeeEE
Q 021628 211 LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVLT-SDGSILEKLNPYFESGKVKAI 276 (310)
Q Consensus 211 ~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 276 (310)
..+++|++|||+|. ...++++++++|+++.+|...... ...+... .....+..++++++++.+++.
T Consensus 232 ~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (345)
T cd08286 232 DGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVDTNTTPMLLKLVSSGKLDPS 311 (345)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCchhhHHHHHHHHHcCCCChH
Confidence 12479999999874 477789999999999998543111 1122211 123567889999999998764
Q ss_pred ecCCcccchhhHHHHHHHHHcCC--CCccEEEEe
Q 021628 277 IDPKGPFPFSQTLEAFSHLESSR--ATGKVVIHP 308 (310)
Q Consensus 277 ~~~~~~~~~~~~~~a~~~~~~~~--~~~k~vi~~ 308 (310)
...++.|++++++++++.+.+.. ...|++|+|
T Consensus 312 ~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 312 KLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred HcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 33468899999999999998764 234888865
No 55
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=3e-35 Score=264.81 Aligned_cols=298 Identities=31% Similarity=0.433 Sum_probs=243.5
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
||||++..++.. ++++ +.|.|.++++||+||+.++++|++|+....+.++ ..+|.++|||++|+|+.+|+++.
T Consensus 1 ~~a~~~~~~~~~---~~~~-~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~---~~~p~~~g~e~~G~v~~vG~~~~ 73 (367)
T cd08263 1 MKAAVLKGPNPP---LTIE-EIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP---FPPPFVLGHEISGEVVEVGPNVE 73 (367)
T ss_pred CeeEEEecCCCC---cEEE-EeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCC---CCCCcccccccceEEEEeCCCCC
Confidence 999999998755 6888 8999999999999999999999999998888663 35678999999999999999998
Q ss_pred C---CCCCCeeEeecCcc--------------ccCC--------------------------CCCCCcceeEEEEecCcc
Q 021628 81 K---FKVGDEVYGDINEK--------------ALDH--------------------------PKRNGSLAEYTAVEENLL 117 (310)
Q Consensus 81 ~---~~~Gd~V~~~~~~~--------------~~~~--------------------------~~~~g~~~~~~~~~~~~~ 117 (310)
+ +++||+|++.+... .... ....|++++|+.++...+
T Consensus 74 ~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 153 (367)
T cd08263 74 NPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATAL 153 (367)
T ss_pred CCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhE
Confidence 8 99999998842100 0000 013589999999999999
Q ss_pred ccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHc
Q 021628 118 ALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSL 195 (310)
Q Consensus 118 ~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~ 195 (310)
+++|+++++.+++.++++++|||+++ ....+.++++|+|+| +|.+|++++++|+.+ |.+ +++++.++++.+.++++
T Consensus 154 ~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~-G~~~vi~~~~s~~~~~~~~~~ 231 (367)
T cd08263 154 APLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAF-GASPIIAVDVRDEKLAKAKEL 231 (367)
T ss_pred EECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHh
Confidence 99999999999999999999999998 467789999999996 899999999999996 988 78888899999999999
Q ss_pred CCCEEeeCCCCcccc------cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCC------------CceEEEE
Q 021628 196 GADLAIDYTKENIED------LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP------------PASSFVL 254 (310)
Q Consensus 196 g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~------------~~~~~~~ 254 (310)
|++.+++.+..++.. ...++|++||+++. ...++++++++|+++.++..... .+..+..
T Consensus 232 g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 311 (367)
T cd08263 232 GATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIG 311 (367)
T ss_pred CCceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEe
Confidence 999998876544321 13579999999874 47889999999999999754311 1111111
Q ss_pred e---cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628 255 T---SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH 307 (310)
Q Consensus 255 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~ 307 (310)
. ...+.++.+++++.++.+++....++.|+++++.++++.+.++...||+|++
T Consensus 312 ~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 312 SYGARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred cCCCCcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 1 1136788999999999988653356789999999999999999888999874
No 56
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=1.4e-35 Score=265.35 Aligned_cols=298 Identities=22% Similarity=0.290 Sum_probs=234.9
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCC-------CCCCCCcccccceeEEEE
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-------TDSPLPTIPGYDVAGVVE 73 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~-------~~~~~p~~~G~e~~G~V~ 73 (310)
|||++++++++. +++ +.+.|++.+++|+||+.++++|++|+..+.|.... ....+|.++|||++|+|+
T Consensus 1 mka~~~~~~~~~----~~~-~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~ 75 (350)
T cd08256 1 MRAVVCHGPQDY----RLE-EVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVV 75 (350)
T ss_pred CeeEEEecCCce----EEE-ECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEE
Confidence 999999987765 899 89999999999999999999999999988775310 001457789999999999
Q ss_pred EeCCCCC--CCCCCCeeEeecCcccc------------------CCC--CCCCcceeEEEEecC-ccccCCCCCChhhhc
Q 021628 74 KVGSQVK--KFKVGDEVYGDINEKAL------------------DHP--KRNGSLAEYTAVEEN-LLALKPKNLSFVEAA 130 (310)
Q Consensus 74 ~~g~~~~--~~~~Gd~V~~~~~~~~~------------------~~~--~~~g~~~~~~~~~~~-~~~~ip~~~~~~~aa 130 (310)
++|++++ .+++||+|++.+..... .+. ...|+|++|+.++.+ .++++|+++++++++
T Consensus 76 ~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa 155 (350)
T cd08256 76 ELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAI 155 (350)
T ss_pred EeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHh
Confidence 9999998 89999999873211000 001 136899999999987 678999999999999
Q ss_pred cccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628 131 SLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (310)
Q Consensus 131 ~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (310)
.+ ..+.++|++++.+++++|++|+|.| +|.+|++++++|+.+ |++ ++++++++++.+.++++|++.+++.+..++.
T Consensus 156 ~~-~~~~ta~~a~~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 232 (350)
T cd08256 156 LI-EPLACALHAVDRANIKFDDVVVLAG-AGPLGLGMIGAARLK-NPKKLIVLDLKDERLALARKFGADVVLNPPEVDVV 232 (350)
T ss_pred hh-hHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCHH
Confidence 88 7889999998778899999999955 899999999999997 876 5566778889988899999888876544321
Q ss_pred c------cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCceE-----------EEE-ecCHHHHHHHHHHH
Q 021628 210 D------LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS-----------FVL-TSDGSILEKLNPYF 268 (310)
Q Consensus 210 ~------~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~-----------~~~-~~~~~~~~~~~~~~ 268 (310)
. ...++|++||++|. ...++++++++|+++.+|.......+. +.. ......+.++++++
T Consensus 233 ~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 312 (350)
T cd08256 233 EKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCYPIAIDLI 312 (350)
T ss_pred HHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCchhHHHHHHHH
Confidence 1 12479999999873 478899999999999997543211111 000 11234688899999
Q ss_pred HcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEE
Q 021628 269 ESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306 (310)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi 306 (310)
+++.+++...+++.|+++++++|++.+.++...+|+++
T Consensus 313 ~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 313 ASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred HcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 99999864224688999999999999998887778764
No 57
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.3e-34 Score=254.20 Aligned_cols=284 Identities=32% Similarity=0.393 Sum_probs=235.0
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
||++++++.+ + ..++++ +.+.|.+.++||+||+.++++|++|.+..... ..|.++|||++|+|+++|+++.
T Consensus 1 ~~~~~~~~~~-~-~~~~~~-~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~------~~~~~~g~e~~G~v~~~G~~v~ 71 (305)
T cd08270 1 MRALVVDPDA-P-LRLRLG-EVPDPQPAPHEALVRVAAISLNRGELKFAAER------PDGAVPGWDAAGVVERAAADGS 71 (305)
T ss_pred CeEEEEccCC-C-ceeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHhhccC------CCCCcccceeEEEEEEeCCCCC
Confidence 8999999866 5 668888 88999999999999999999999999876521 2356899999999999999999
Q ss_pred CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCC
Q 021628 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGA 160 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~ 160 (310)
.+++||+|++... .|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++......+|++|+|+|+.
T Consensus 72 ~~~~Gd~V~~~~~---------~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vli~g~~ 142 (305)
T cd08270 72 GPAVGARVVGLGA---------MGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPLLGRRVLVTGAS 142 (305)
T ss_pred CCCCCCEEEEecC---------CcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCCCCCEEEEECCC
Confidence 9999999998642 5899999999999999999999999999999999999999854444469999999988
Q ss_pred cchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC--hHHHHhhcccCCEE
Q 021628 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--CDKALKAVKEGGRV 238 (310)
Q Consensus 161 g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~--~~~~~~~l~~~G~~ 238 (310)
|.+|.+++++++.. |++++.+++++++.+.++++|.+..+..... . ..+++|+++|++|+ ...++++++++|++
T Consensus 143 ~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~--~~~~~d~vl~~~g~~~~~~~~~~l~~~G~~ 218 (305)
T cd08270 143 GGVGRFAVQLAALA-GAHVVAVVGSPARAEGLRELGAAEVVVGGSE-L--SGAPVDLVVDSVGGPQLARALELLAPGGTV 218 (305)
T ss_pred cHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecccc-c--cCCCceEEEECCCcHHHHHHHHHhcCCCEE
Confidence 99999999999996 9999999999999999999998655433221 1 12479999999884 57899999999999
Q ss_pred EEEeCCCCC----------C---ceEEEE---e---cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCC
Q 021628 239 VSIIGSVTP----------P---ASSFVL---T---SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSR 299 (310)
Q Consensus 239 v~~g~~~~~----------~---~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 299 (310)
+.+|..... . ...+.. . .....+..+++++.++++++. +.+.+++++++++++.+.++.
T Consensus 219 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~ 296 (305)
T cd08270 219 VSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARR 296 (305)
T ss_pred EEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCC
Confidence 999854210 0 111111 1 113567889999999999864 457899999999999999988
Q ss_pred CCccEEEEe
Q 021628 300 ATGKVVIHP 308 (310)
Q Consensus 300 ~~~k~vi~~ 308 (310)
..+|+++.+
T Consensus 297 ~~gkvvi~~ 305 (305)
T cd08270 297 FRGKAVLDV 305 (305)
T ss_pred CCceEEEeC
Confidence 889999865
No 58
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=5.2e-35 Score=261.73 Aligned_cols=300 Identities=26% Similarity=0.359 Sum_probs=241.8
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCC----------CCCCCCcccccceeE
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA----------TDSPLPTIPGYDVAG 70 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~----------~~~~~p~~~G~e~~G 70 (310)
|||+++..++.+ ++++ +.|.|++.++||+||+.++++|++|++.+.|.++. ....+|.++|||++|
T Consensus 1 ~~a~~~~~~~~~---~~~~-~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G 76 (350)
T cd08240 1 MKAAAVVEPGKP---LEEV-EIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVG 76 (350)
T ss_pred CeeEEeccCCCC---ceEE-ecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeE
Confidence 999999988876 7888 89999999999999999999999999998886531 022456789999999
Q ss_pred EEEEeCCCCCCCCCCCeeEeecCcccc------------------CCCCCCCcceeEEEEecCccccCCCCCChhhhccc
Q 021628 71 VVEKVGSQVKKFKVGDEVYGDINEKAL------------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL 132 (310)
Q Consensus 71 ~V~~~g~~~~~~~~Gd~V~~~~~~~~~------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~ 132 (310)
+|+++|++++++++||+|++.+.-... .+....|++++|+.++...++++|+++++.+++.+
T Consensus 77 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l 156 (350)
T cd08240 77 EVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATL 156 (350)
T ss_pred EEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehh
Confidence 999999999999999999886321000 00113689999999999999999999999999999
Q ss_pred cchHHHHHHHHH-hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCccc-
Q 021628 133 PLATETAYEGLE-RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIE- 209 (310)
Q Consensus 133 ~~~~~ta~~al~-~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~- 209 (310)
++.+++||+++. ....+++++|+|+| +|.+|++++++|+.+ |+ +++++..++++.+.++++|.+.+++.++..+.
T Consensus 157 ~~~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 234 (350)
T cd08240 157 ACSGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKAL-GPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAK 234 (350)
T ss_pred hchhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHH
Confidence 999999999995 45566899999997 899999999999996 98 67888889999999999999888876543321
Q ss_pred ----ccCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCC----------CceEEEE--ecCHHHHHHHHHHHHc
Q 021628 210 ----DLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP----------PASSFVL--TSDGSILEKLNPYFES 270 (310)
Q Consensus 210 ----~~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~----------~~~~~~~--~~~~~~~~~~~~~~~~ 270 (310)
...+++|++||+.|. ...++++|+++|+++.+|..... ....+.. ....+++..+++++++
T Consensus 235 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~~ 314 (350)
T cd08240 235 RIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALAKA 314 (350)
T ss_pred HHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHHHHc
Confidence 112379999999873 58899999999999998754321 1111111 1234678899999999
Q ss_pred CCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 271 GKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
+.+++. ....|++++++++++.+..++..+|+++++
T Consensus 315 ~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 350 (350)
T cd08240 315 GKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLKP 350 (350)
T ss_pred CCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence 998764 346899999999999999888889988753
No 59
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=8.1e-35 Score=264.30 Aligned_cols=302 Identities=29% Similarity=0.423 Sum_probs=237.0
Q ss_pred CEEEEEc--ccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCC--------CCCCCCcccccceeE
Q 021628 1 MKAWVYK--EYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA--------TDSPLPTIPGYDVAG 70 (310)
Q Consensus 1 mka~~~~--~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~--------~~~~~p~~~G~e~~G 70 (310)
|||+++. .+|.+...++++ +.|.|+++++||+||+.++++|++|++...+.... .....+.++|||++|
T Consensus 13 ~~a~~~~~~~~g~~~~~~~~~-~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G 91 (393)
T cd08246 13 MYAFAIRPERYGDPAQAIQLE-DVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASG 91 (393)
T ss_pred hhheeeecccCCCcccceEEe-ecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEE
Confidence 8898885 345442357888 89999999999999999999999999887764100 001123578999999
Q ss_pred EEEEeCCCCCCCCCCCeeEeecCcccc-------------------CCCCCCCcceeEEEEecCccccCCCCCChhhhcc
Q 021628 71 VVEKVGSQVKKFKVGDEVYGDINEKAL-------------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAAS 131 (310)
Q Consensus 71 ~V~~~g~~~~~~~~Gd~V~~~~~~~~~-------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~ 131 (310)
+|+++|++++.+++||+|++.+..... ......|+|++|++++...++++|+++++++++.
T Consensus 92 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~ 171 (393)
T cd08246 92 IVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAA 171 (393)
T ss_pred EEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHhh
Confidence 999999999999999999886420000 0001359999999999999999999999999999
Q ss_pred ccchHHHHHHHHH-h--cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCc-
Q 021628 132 LPLATETAYEGLE-R--SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN- 207 (310)
Q Consensus 132 ~~~~~~ta~~al~-~--~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~- 207 (310)
+++.+.|||+++. . +++++|++|+|+|++|.+|++++++|+.+ |++++++++++++++.++++|++++++..+.+
T Consensus 172 l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~-G~~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~ 250 (393)
T cd08246 172 YMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAA-GANPVAVVSSEEKAEYCRALGAEGVINRRDFDH 250 (393)
T ss_pred hcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHcCCCEEEccccccc
Confidence 9999999999984 3 68899999999998899999999999996 99999999999999999999998888753321
Q ss_pred ---------------------cc----cc--CC-CccEEEeCCCC--hHHHHhhcccCCEEEEEeCCCC-CCceE-----
Q 021628 208 ---------------------IE----DL--PE-KFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT-PPASS----- 251 (310)
Q Consensus 208 ---------------------~~----~~--~~-~~dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~~~-~~~~~----- 251 (310)
+. .. .. ++|++||++|. ...++++++++|+++.+|.... ...+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~l~ 330 (393)
T cd08246 251 WGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNHTYDNRYLW 330 (393)
T ss_pred ccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCCCCcHHHHh
Confidence 00 01 12 79999999884 5789999999999999975431 11111
Q ss_pred -----EEE--ecCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcC-CCCccEEE
Q 021628 252 -----FVL--TSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESS-RATGKVVI 306 (310)
Q Consensus 252 -----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~k~vi 306 (310)
... ....+.+.++++++.++.+.+. .++.|++++++++++.+.++ +..||+++
T Consensus 331 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~a~~~~~~~~~~~gkvvv 391 (393)
T cd08246 331 MRQKRIQGSHFANDREAAEANRLVMKGRIDPC--LSKVFSLDETPDAHQLMHRNQHHVGNMAV 391 (393)
T ss_pred hheeEEEecccCcHHHHHHHHHHHHcCCceee--eeEEEeHHHHHHHHHHHHhCccccceEEE
Confidence 000 0123478899999999998764 46889999999999999988 67788775
No 60
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=9.9e-35 Score=258.66 Aligned_cols=297 Identities=26% Similarity=0.343 Sum_probs=238.5
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
||++++.++++. .+++ +.|.|++.++||+||+.++++|++|++.+.|.++ ...|.++|||++|+|+++|+++.
T Consensus 1 mka~~~~~~~~~---~~~~-~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~---~~~~~~~g~e~~G~V~~~G~~v~ 73 (338)
T PRK09422 1 MKAAVVNKDHTG---DVVV-EKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFG---DKTGRILGHEGIGIVKEVGPGVT 73 (338)
T ss_pred CeEEEecCCCCC---ceEE-EecCCCCCCCeEEEEEEEEeechhHHHHHcCCCC---CCCCccCCcccceEEEEECCCCc
Confidence 999999998876 2378 8999999999999999999999999999888653 23467899999999999999999
Q ss_pred CCCCCCeeEeecCc-------------------cccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628 81 KFKVGDEVYGDINE-------------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~-------------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 141 (310)
.+++||+|++.+.- ....+....|++++|+.++...++++|+++++.+++.+++.+.|||+
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~ 153 (338)
T PRK09422 74 SLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYK 153 (338)
T ss_pred cCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHH
Confidence 99999999862110 00011223699999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCC-Cccc----ccCCCcc
Q 021628 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIE----DLPEKFD 216 (310)
Q Consensus 142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~----~~~~~~d 216 (310)
++..+++++|++|+|+| +|++|++++++|+.+.|++++++++++++++.++++|++.+++.+. .+.. ....++|
T Consensus 154 ~~~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~~~d 232 (338)
T PRK09422 154 AIKVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTGGAH 232 (338)
T ss_pred HHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHHhcCCCc
Confidence 99888899999999999 7999999999999733899999999999999999999988887643 2211 1223688
Q ss_pred EEEeC-CC--ChHHHHhhcccCCEEEEEeCCCCC----------CceEEEEec--CHHHHHHHHHHHHcCCeeEEecCCc
Q 021628 217 VVFDA-VG--QCDKALKAVKEGGRVVSIIGSVTP----------PASSFVLTS--DGSILEKLNPYFESGKVKAIIDPKG 281 (310)
Q Consensus 217 vvi~~-~g--~~~~~~~~l~~~G~~v~~g~~~~~----------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (310)
+++.+ .+ ....++++++++|+++.+|..... ....+.... ..++++.+++++.++.+.+. .+
T Consensus 233 ~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~---v~ 309 (338)
T PRK09422 233 AAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKVVPK---VQ 309 (338)
T ss_pred EEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCCCcc---EE
Confidence 55544 43 258899999999999999854211 111121111 35778899999999988654 24
Q ss_pred ccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 282 PFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 282 ~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
.+++++++++++.+.++...+|+++.+
T Consensus 310 ~~~~~~~~~a~~~~~~~~~~gkvvv~~ 336 (338)
T PRK09422 310 LRPLEDINDIFDEMEQGKIQGRMVIDF 336 (338)
T ss_pred EEcHHHHHHHHHHHHcCCccceEEEec
Confidence 589999999999999998889998854
No 61
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=1e-34 Score=263.87 Aligned_cols=305 Identities=30% Similarity=0.402 Sum_probs=241.7
Q ss_pred CEEEEEcc--cCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCC--------CCCCCC-ccccccee
Q 021628 1 MKAWVYKE--YGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA--------TDSPLP-TIPGYDVA 69 (310)
Q Consensus 1 mka~~~~~--~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~--------~~~~~p-~~~G~e~~ 69 (310)
|||+++.. ++++.+.+++. +.|.|.+.++||+||+.++++|++|++...+.... .....| .++|||++
T Consensus 8 ~~a~~~~~~~~~~~~~~~~~~-~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~ 86 (398)
T TIGR01751 8 MYAFAIREERDGDPRQAIQLE-VVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDAS 86 (398)
T ss_pred hhheEEecccCCCcccceEEe-ecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceE
Confidence 89999965 77664568998 89999999999999999999999998876553210 000123 37999999
Q ss_pred EEEEEeCCCCCCCCCCCeeEeecCccc-----------cC--------CCCCCCcceeEEEEecCccccCCCCCChhhhc
Q 021628 70 GVVEKVGSQVKKFKVGDEVYGDINEKA-----------LD--------HPKRNGSLAEYTAVEENLLALKPKNLSFVEAA 130 (310)
Q Consensus 70 G~V~~~g~~~~~~~~Gd~V~~~~~~~~-----------~~--------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa 130 (310)
|+|+++|+++..+++||+|++...... .. .....|+|++|+.++...++++|+++++++++
T Consensus 87 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa 166 (398)
T TIGR01751 87 GVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAA 166 (398)
T ss_pred EEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHHHHh
Confidence 999999999999999999988642000 00 01135899999999999999999999999999
Q ss_pred cccchHHHHHHHHH---hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCc
Q 021628 131 SLPLATETAYEGLE---RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN 207 (310)
Q Consensus 131 ~~~~~~~ta~~al~---~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~ 207 (310)
.+.+.+.+||+++. ..++++|++|+|+|++|.+|++++++|+.+ |++++++++++++.+.++++|++.+++.++++
T Consensus 167 ~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~-G~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~ 245 (398)
T TIGR01751 167 CPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAG-GGNPVAVVSSPEKAEYCRELGAEAVIDRNDFG 245 (398)
T ss_pred hccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHcCCCEEecCCCcc
Confidence 99999999999984 477899999999998899999999999996 99999888999999999999999988865421
Q ss_pred c----------------------c-----c-cCCCccEEEeCCCC--hHHHHhhcccCCEEEEEeCCCCC-CceE-----
Q 021628 208 I----------------------E-----D-LPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP-PASS----- 251 (310)
Q Consensus 208 ~----------------------~-----~-~~~~~dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~~~~-~~~~----- 251 (310)
. . . ..+++|++|||+|. ...++++++++|+++.+|..... ..++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 325 (398)
T TIGR01751 246 HWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHDYDNRYLW 325 (398)
T ss_pred hhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCCCcCHHHHh
Confidence 0 0 0 02479999999984 57889999999999999864311 1100
Q ss_pred -----EEE--ecCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628 252 -----FVL--TSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPI 309 (310)
Q Consensus 252 -----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~ 309 (310)
... ......++++++++.++.+.+. +++.+++++++++++.+.++...+|++++++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 388 (398)
T TIGR01751 326 MRQKRIQGSHFANLREAWEANRLVAKGRIDPT--LSKVYPLEEIGQAHQDVHRNHHQGNVAVLVL 388 (398)
T ss_pred hcccEEEccccCcHHHHHHHHHHHHCCCcccc--eeeEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence 000 0112347889999999998854 4688999999999999999998899998765
No 62
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=4.6e-35 Score=263.31 Aligned_cols=296 Identities=26% Similarity=0.358 Sum_probs=237.7
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||+++.++++. ++++ +.+.|++.++||+||+.++++|++|++...|.++ ..+|.++|||++|+|+++|+++.
T Consensus 3 ~~a~~~~~~~~~---~~~~-~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~---~~~p~v~G~e~~G~V~~vG~~v~ 75 (365)
T cd08278 3 TTAAVVREPGGP---FVLE-DVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP---TPLPAVLGHEGAGVVEAVGSAVT 75 (365)
T ss_pred cEEeeeccCCCc---ceEE-EeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC---CCCCcccccceeEEEEEeCCCcc
Confidence 899999997765 6778 8999999999999999999999999999988653 34688999999999999999999
Q ss_pred CCCCCCeeEeecCccc--------------------cC--------------------CCCCCCcceeEEEEecCccccC
Q 021628 81 KFKVGDEVYGDINEKA--------------------LD--------------------HPKRNGSLAEYTAVEENLLALK 120 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~--------------------~~--------------------~~~~~g~~~~~~~~~~~~~~~i 120 (310)
.+++||+|++...... .. .....|+|++|+.++...++++
T Consensus 76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~i 155 (365)
T cd08278 76 GLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKV 155 (365)
T ss_pred cCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEEC
Confidence 9999999986321000 00 0112589999999999999999
Q ss_pred CCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCC
Q 021628 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGAD 198 (310)
Q Consensus 121 p~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~ 198 (310)
|+++++.+++.+++++.||+.++ ....++++++|+|+| +|.+|++++++|+.+ |++ ++++++++++.+.++++|++
T Consensus 156 P~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~la~~~-G~~~v~~~~~~~~k~~~~~~~g~~ 233 (365)
T cd08278 156 DKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFG-AGAVGLAAVMAAKIA-GCTTIIAVDIVDSRLELAKELGAT 233 (365)
T ss_pred CCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCc
Confidence 99999999999999999999988 578899999999997 799999999999996 985 77778899999999999999
Q ss_pred EEeeCCCCcccc-----cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCC------------CCceEEEEe---
Q 021628 199 LAIDYTKENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT------------PPASSFVLT--- 255 (310)
Q Consensus 199 ~~~~~~~~~~~~-----~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~------------~~~~~~~~~--- 255 (310)
.+++.++.++.+ ...++|+++||+|. ...++++++++|+++.+|.... ..+..+...
T Consensus 234 ~~i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (365)
T cd08278 234 HVINPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEG 313 (365)
T ss_pred EEecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecC
Confidence 888876544321 13579999999973 4889999999999999986421 111122111
Q ss_pred --cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628 256 --SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH 307 (310)
Q Consensus 256 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~ 307 (310)
...+.+.++++++.++.+.+. .+...|++++++++++.+.++... |++++
T Consensus 314 ~~~~~~~~~~~~~~l~~g~l~~~-~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 365 (365)
T cd08278 314 DSVPQEFIPRLIELYRQGKFPFD-KLVTFYPFEDINQAIADSESGKVI-KPVLR 365 (365)
T ss_pred CcChHHHHHHHHHHHHcCCCChH-HheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence 113567889999999988542 223579999999999999887764 77763
No 63
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=1.1e-34 Score=258.38 Aligned_cols=295 Identities=26% Similarity=0.369 Sum_probs=241.9
Q ss_pred EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (310)
Q Consensus 2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~ 81 (310)
|+|+.+..+.. ++++ +.+.|++.++||+||+.++++|++|++.+.|.+. ...+|.++|||++|+|+++|+++.+
T Consensus 1 ~~~~~~~~~~~---~~~~-~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~--~~~~p~~~g~e~~G~V~~vG~~v~~ 74 (337)
T cd05283 1 KGYAARDASGK---LEPF-TFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWG--PTKYPLVPGHEIVGIVVAVGSKVTK 74 (337)
T ss_pred CceEEecCCCC---ceEE-eccCCCCCCCeEEEEEEEecccchHHHHhcCCcC--CCCCCcccCcceeeEEEEECCCCcc
Confidence 67888888754 7889 8999999999999999999999999999988763 3456889999999999999999999
Q ss_pred CCCCCeeEeec-Cc--------------ccc-----------CCCCCCCcceeEEEEecCccccCCCCCChhhhccccch
Q 021628 82 FKVGDEVYGDI-NE--------------KAL-----------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLA 135 (310)
Q Consensus 82 ~~~Gd~V~~~~-~~--------------~~~-----------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~ 135 (310)
+++||+|+..+ .. +.. .+....|+|++|+.++...++++|+++++++++.+++.
T Consensus 75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~ 154 (337)
T cd05283 75 FKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCA 154 (337)
T ss_pred cCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhH
Confidence 99999997321 00 000 01123689999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcc-cccCCC
Q 021628 136 TETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI-EDLPEK 214 (310)
Q Consensus 136 ~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~ 214 (310)
+.+||+++....+++|++++|.| +|.+|++++++++.+ |++++++++++++.+.++++|.+.+++.+..+. ....++
T Consensus 155 ~~ta~~~~~~~~~~~g~~vlV~g-~g~vG~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~ 232 (337)
T cd05283 155 GITVYSPLKRNGVGPGKRVGVVG-IGGLGHLAVKFAKAL-GAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAAGS 232 (337)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhhhhccCC
Confidence 99999999766789999999987 899999999999996 999999999999999999999988887654332 223468
Q ss_pred ccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC----------ceEEE--EecCHHHHHHHHHHHHcCCeeEEecC
Q 021628 215 FDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFV--LTSDGSILEKLNPYFESGKVKAIIDP 279 (310)
Q Consensus 215 ~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (310)
+|++|||+|. ...++++++++|+++.+|...... ...+. .....+.++.+++++.++++++.
T Consensus 233 ~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~--- 309 (337)
T cd05283 233 LDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGIKPW--- 309 (337)
T ss_pred ceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCCccc---
Confidence 9999999873 588899999999999998653211 11111 11245778999999999998764
Q ss_pred CcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628 280 KGPFPFSQTLEAFSHLESSRATGKVVIH 307 (310)
Q Consensus 280 ~~~~~~~~~~~a~~~~~~~~~~~k~vi~ 307 (310)
.+.|+++++++|++.+.+++..||+|++
T Consensus 310 ~~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 310 VEVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred eEEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 3679999999999999999998998874
No 64
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=4.5e-35 Score=261.73 Aligned_cols=299 Identities=28% Similarity=0.363 Sum_probs=241.2
Q ss_pred CEEEEEcccCCCccceEEeccccCCCC-CCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~ 79 (310)
||++++.+++++ ++. +.|.|.+ .++||+||+.++++|++|+..+.|.++. ..+|.++|+|++|+|+++|+++
T Consensus 1 ~ka~~~~~~~~~----~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~V~~vG~~v 73 (347)
T cd05278 1 MKALVYLGPGKI----GLE-EVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG--AKHGMILGHEFVGEVVEVGSDV 73 (347)
T ss_pred CceEEEecCCce----EEE-EcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC--CCCCceeccceEEEEEEECCCc
Confidence 899999987765 888 8999999 9999999999999999999999887743 4568899999999999999999
Q ss_pred CCCCCCCeeEeecCcc---------------------ccCCCCCCCcceeEEEEecC--ccccCCCCCChhhhccccchH
Q 021628 80 KKFKVGDEVYGDINEK---------------------ALDHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLAT 136 (310)
Q Consensus 80 ~~~~~Gd~V~~~~~~~---------------------~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~ 136 (310)
+++++||+|++.+... ++.+....|+|++|++++.+ .++++|+++++++++.+++++
T Consensus 74 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~ 153 (347)
T cd05278 74 KRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDIL 153 (347)
T ss_pred cccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchh
Confidence 9999999999742110 00111336899999999987 899999999999999999999
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCcccc-----
Q 021628 137 ETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED----- 210 (310)
Q Consensus 137 ~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----- 210 (310)
.|||+++...++++|++|+|.| +|.+|++++++|+.+ |. +++++.+++++.+.++++|.+.+++.+..++..
T Consensus 154 ~ta~~~~~~~~~~~~~~VlI~g-~g~vg~~~iqlak~~-g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~~~ 231 (347)
T cd05278 154 PTGFHGAELAGIKPGSTVAVIG-AGPVGLCAVAGARLL-GAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILEL 231 (347)
T ss_pred hheeehhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHHHHHHH
Confidence 9999998778899999999987 799999999999996 86 788888888899988999988888776544321
Q ss_pred -cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCC-----------CceEEEE--ecCHHHHHHHHHHHHcCCe
Q 021628 211 -LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP-----------PASSFVL--TSDGSILEKLNPYFESGKV 273 (310)
Q Consensus 211 -~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~--~~~~~~~~~~~~~~~~~~~ 273 (310)
..+++|++||+.|. ...++++|+++|+++.+|..... ....+.. ....+.++++++++.++.+
T Consensus 232 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (347)
T cd05278 232 TGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKI 311 (347)
T ss_pred cCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCCC
Confidence 12479999999863 47889999999999998744211 1111111 1124678899999999998
Q ss_pred eEEecCCcccchhhHHHHHHHHHcCCC-CccEEEEe
Q 021628 274 KAIIDPKGPFPFSQTLEAFSHLESSRA-TGKVVIHP 308 (310)
Q Consensus 274 ~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~k~vi~~ 308 (310)
++.......|++++++++++.+..+.. .+|+++++
T Consensus 312 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 312 DPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred ChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 864223567999999999999887776 67887653
No 65
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=6.7e-35 Score=259.36 Aligned_cols=297 Identities=30% Similarity=0.456 Sum_probs=241.8
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||+++..+++. ++++ +.|.|.+.++||+||+.++++|++|++...|.++ ...+|.++|||++|+|+++|+++.
T Consensus 1 m~a~~~~~~~~~---~~~~-~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~--~~~~~~~~g~e~~G~v~~~g~~~~ 74 (334)
T PRK13771 1 MKAVILPGFKQG---YRIE-EVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYP--RMKYPVILGHEVVGTVEEVGENVK 74 (334)
T ss_pred CeeEEEcCCCCC---cEEE-eCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCC--CCCCCeeccccceEEEEEeCCCCc
Confidence 999999999974 6889 8999999999999999999999999998888663 234578899999999999999998
Q ss_pred CCCCCCeeEeecCccc------------------cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628 81 KFKVGDEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (310)
.+++||+|++...... ..+....|+|++|+.++.+.++++|+++++.+++.+++++.++|++
T Consensus 75 ~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~ 154 (334)
T PRK13771 75 GFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRG 154 (334)
T ss_pred cCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHH
Confidence 8999999998642100 0111236899999999999999999999999999999999999999
Q ss_pred HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCC--CcccccCCCccEEEe
Q 021628 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK--ENIEDLPEKFDVVFD 220 (310)
Q Consensus 143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~dvvi~ 220 (310)
+....++++++|+|+|++|.+|++++++|+.+ |.+++++++++++++.++++ ++++++.+. +..... .++|+++|
T Consensus 155 ~~~~~~~~~~~vlI~g~~g~~g~~~~~la~~~-g~~vi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~-~~~d~~ld 231 (334)
T PRK13771 155 LRRAGVKKGETVLVTGAGGGVGIHAIQVAKAL-GAKVIAVTSSESKAKIVSKY-ADYVIVGSKFSEEVKKI-GGADIVIE 231 (334)
T ss_pred HHhcCCCCCCEEEEECCCccHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH-HHHhcCchhHHHHHHhc-CCCcEEEE
Confidence 96558999999999998899999999999996 99999999999999988877 666655431 111112 37999999
Q ss_pred CCCC--hHHHHhhcccCCEEEEEeCCCCC----C--------ceEEE--EecCHHHHHHHHHHHHcCCeeEEecCCcccc
Q 021628 221 AVGQ--CDKALKAVKEGGRVVSIIGSVTP----P--------ASSFV--LTSDGSILEKLNPYFESGKVKAIIDPKGPFP 284 (310)
Q Consensus 221 ~~g~--~~~~~~~l~~~G~~v~~g~~~~~----~--------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (310)
|.|. ...++++++++|+++.+|..... . ...+. .....++++.+++++.++.+++. +++.|+
T Consensus 232 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~ 309 (334)
T PRK13771 232 TVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKIKPV--IGAEVS 309 (334)
T ss_pred cCChHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCCcce--EeeeEc
Confidence 9874 57889999999999999854211 1 11111 11236778999999999998754 467899
Q ss_pred hhhHHHHHHHHHcCCCCccEEEEe
Q 021628 285 FSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 285 ~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
++++++|++.+.++...+|+++++
T Consensus 310 ~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 310 LSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred HHHHHHHHHHHHcCCCcceEEEec
Confidence 999999999999888888988864
No 66
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.8e-34 Score=255.13 Aligned_cols=294 Identities=33% Similarity=0.490 Sum_probs=242.4
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||+++.++++. ..++++ +.+.|.+.++||+||+.++++|+.|+....+.++. ....|.++|||++|+|+++|++++
T Consensus 2 m~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~ 78 (334)
T PTZ00354 2 MRAVTLKGFGGV-DVLKIG-ESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPP-PPGSSEILGLEVAGYVEDVGSDVK 78 (334)
T ss_pred cEEEEEEecCCC-cceEEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC-CCCCCcccceeeEEEEEEeCCCCC
Confidence 999999999886 678888 78888899999999999999999999988876532 234467899999999999999999
Q ss_pred CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 021628 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG 159 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~ 159 (310)
.+++||+|+++.. .|+|++|++++...++++|++++..+++.+++++.+|++++ +..++++|++|+|+|+
T Consensus 79 ~~~~Gd~V~~~~~---------~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga 149 (334)
T PTZ00354 79 RFKEGDRVMALLP---------GGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAG 149 (334)
T ss_pred CCCCCCEEEEecC---------CCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 9999999998642 58999999999999999999999999999999999999998 4588999999999999
Q ss_pred CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCc-ccc------cCCCccEEEeCCCC--hHHHHh
Q 021628 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN-IED------LPEKFDVVFDAVGQ--CDKALK 230 (310)
Q Consensus 160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~------~~~~~dvvi~~~g~--~~~~~~ 230 (310)
+|.+|++++++|+.+ |.+++++++++++.+.++++|.+.+++....+ +.. ..+++|++||+.+. ...+++
T Consensus 150 ~g~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~ 228 (334)
T PTZ00354 150 ASGVGTAAAQLAEKY-GAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAE 228 (334)
T ss_pred CchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchHHHHHHHH
Confidence 999999999999996 99988899999999999999998888765432 211 13579999999873 578999
Q ss_pred hcccCCEEEEEeCCCCCC-c-e----------EEEE---e--cC-------HHHHHHHHHHHHcCCeeEEecCCcccchh
Q 021628 231 AVKEGGRVVSIIGSVTPP-A-S----------SFVL---T--SD-------GSILEKLNPYFESGKVKAIIDPKGPFPFS 286 (310)
Q Consensus 231 ~l~~~G~~v~~g~~~~~~-~-~----------~~~~---~--~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (310)
+++++|+++.++...... . + .+.. . .. ...++++++++.++.+.+. +.+.++++
T Consensus 229 ~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~ 306 (334)
T PTZ00354 229 VLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPI--VDRTYPLE 306 (334)
T ss_pred HhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCc--cccEEcHH
Confidence 999999999987532111 0 1 1111 0 00 1335778889999988753 46889999
Q ss_pred hHHHHHHHHHcCCCCccEEEEeC
Q 021628 287 QTLEAFSHLESSRATGKVVIHPI 309 (310)
Q Consensus 287 ~~~~a~~~~~~~~~~~k~vi~~~ 309 (310)
+++++++.+.++...+|+++++.
T Consensus 307 ~~~~~~~~~~~~~~~~kvvv~~~ 329 (334)
T PTZ00354 307 EVAEAHTFLEQNKNIGKVVLTVN 329 (334)
T ss_pred HHHHHHHHHHhCCCCceEEEecC
Confidence 99999999988887789988653
No 67
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=2.6e-34 Score=255.77 Aligned_cols=299 Identities=31% Similarity=0.469 Sum_probs=245.2
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
||++++..++++ . +.+. +.+.|.+.+++|+|++.++++|++|.....|.++ ....+|.++|+|++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~~-~-~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~-~~~~~~~~~g~~~~G~v~~~G~~v~ 76 (338)
T cd08254 1 MKAWRFHKGSKG-L-LVLE-EVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVP-TLTKLPLTLGHEIAGTVVEVGAGVT 76 (338)
T ss_pred CeeEEEecCCCC-c-eEEe-ccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCc-ccCCCCEeccccccEEEEEECCCCc
Confidence 999999999887 4 6777 7899999999999999999999999999988764 2345678899999999999999999
Q ss_pred CCCCCCeeEeecC------------------ccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628 81 KFKVGDEVYGDIN------------------EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (310)
Q Consensus 81 ~~~~Gd~V~~~~~------------------~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (310)
.+++||+|++.+. .....+....|+|++|+.++...++++|++++..+++.++..+.+||++
T Consensus 77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~ 156 (338)
T cd08254 77 NFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHA 156 (338)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHH
Confidence 9999999987211 0001112235899999999999999999999999999999999999999
Q ss_pred H-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc-----ccCCCcc
Q 021628 143 L-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE-----DLPEKFD 216 (310)
Q Consensus 143 l-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~d 216 (310)
+ ....++++++|+|.| +|.+|++++++|+.+ |.+|++++.++++.+.++++|.+++++....... ...+++|
T Consensus 157 l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~-G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~D 234 (338)
T cd08254 157 VVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAM-GAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFD 234 (338)
T ss_pred HHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHHHHhcCCCce
Confidence 8 467799999999986 799999999999996 9999999999999999999998888776543321 1234799
Q ss_pred EEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCce----------EE--EEecCHHHHHHHHHHHHcCCeeEEecCCc
Q 021628 217 VVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS----------SF--VLTSDGSILEKLNPYFESGKVKAIIDPKG 281 (310)
Q Consensus 217 vvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~----------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (310)
+++||.|. .+.++++|+++|+++.++.......+ .. ........+..++++++++.+++. .+
T Consensus 235 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~---~~ 311 (338)
T cd08254 235 VIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQ---VE 311 (338)
T ss_pred EEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCccc---ce
Confidence 99999863 57899999999999999754211111 00 111235778899999999998864 46
Q ss_pred ccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 282 PFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 282 ~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
.|++++++++++.+.+++..+|++++|
T Consensus 312 ~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 312 TRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred eEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 899999999999999999889999875
No 68
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=1.1e-34 Score=259.00 Aligned_cols=299 Identities=28% Similarity=0.418 Sum_probs=243.8
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
||||++.+++.+ ++++ +.|.|.+.+++|+||+.++++|++|+....|.++ ...+|.++|+|++|+|+.+|+++.
T Consensus 1 m~a~~~~~~~~~---~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~~~~~g~e~~G~V~~~G~~~~ 74 (345)
T cd08260 1 MRAAVYEEFGEP---LEIR-EVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDP--DVTLPHVPGHEFAGVVVEVGEDVS 74 (345)
T ss_pred CeeEEEecCCCC---cEEE-EccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCC--CCCCCeeeccceeEEEEEECCCCc
Confidence 999999988865 6888 8999999999999999999999999999888653 235578999999999999999999
Q ss_pred CCCCCCeeEeecCc------------------cccCCCCCCCcceeEEEEecC--ccccCCCCCChhhhccccchHHHHH
Q 021628 81 KFKVGDEVYGDINE------------------KALDHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLATETAY 140 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~------------------~~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~ta~ 140 (310)
.+++||+|++.+.. .+..+....|+|++|++++.. .++++|+++++++++.+++.+++||
T Consensus 75 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~ 154 (345)
T cd08260 75 RWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAF 154 (345)
T ss_pred cCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHH
Confidence 99999999872110 000012236999999999975 8999999999999999999999999
Q ss_pred HHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCC-Ccccc-----cCC
Q 021628 141 EGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIED-----LPE 213 (310)
Q Consensus 141 ~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~-----~~~ 213 (310)
+++ +..++.++++|+|+| +|.+|++++++|+.. |.+++++++++++.+.++++|++.+++.+. .++.. ..+
T Consensus 155 ~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~ 232 (345)
T cd08260 155 RALVHQARVKPGEWVAVHG-CGGVGLSAVMIASAL-GARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGG 232 (345)
T ss_pred HHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCC
Confidence 998 578899999999999 899999999999996 999999999999999999999998888765 33321 122
Q ss_pred CccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC-------------ceEEEE--ecCHHHHHHHHHHHHcCCeeE
Q 021628 214 KFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP-------------ASSFVL--TSDGSILEKLNPYFESGKVKA 275 (310)
Q Consensus 214 ~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~-------------~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 275 (310)
++|++||+.|. ....+++++++|+++.+|...... .+.+.. ......++.++++++++.+.+
T Consensus 233 ~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~ 312 (345)
T cd08260 233 GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGKLDP 312 (345)
T ss_pred CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCCCCh
Confidence 79999999873 478899999999999998543111 111111 123467889999999999876
Q ss_pred EecCCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628 276 IIDPKGPFPFSQTLEAFSHLESSRATGKVVIH 307 (310)
Q Consensus 276 ~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~ 307 (310)
...+.+.+++++++++++.+..+...+|++++
T Consensus 313 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 313 EPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred hhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 43346789999999999999998888888764
No 69
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=1.2e-34 Score=260.60 Aligned_cols=295 Identities=27% Similarity=0.363 Sum_probs=237.1
Q ss_pred EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (310)
Q Consensus 2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~ 81 (310)
||+++.+++.. ++++ +.+.|.+++++|+||+.++++|++|++.+.+.++ ..+|.++|||++|+|+++|+++..
T Consensus 2 ~a~~~~~~~~~---~~~~-~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~---~~~~~i~g~e~~G~V~~vG~~v~~ 74 (365)
T cd05279 2 KAAVLWEKGKP---LSIE-EIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP---TPLPVILGHEGAGIVESIGPGVTT 74 (365)
T ss_pred ceeEEecCCCC---cEEE-EeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC---CCCCcccccceeEEEEEeCCCccc
Confidence 78889987755 6888 8999999999999999999999999999988653 346789999999999999999999
Q ss_pred CCCCCeeEeecCcccc---------------------------------------CCCCCCCcceeEEEEecCccccCCC
Q 021628 82 FKVGDEVYGDINEKAL---------------------------------------DHPKRNGSLAEYTAVEENLLALKPK 122 (310)
Q Consensus 82 ~~~Gd~V~~~~~~~~~---------------------------------------~~~~~~g~~~~~~~~~~~~~~~ip~ 122 (310)
+++||+|++.+..... .+....|+|++|+.++.+.++++|+
T Consensus 75 ~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~ 154 (365)
T cd05279 75 LKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDP 154 (365)
T ss_pred CCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCC
Confidence 9999999886320000 0001247999999999999999999
Q ss_pred CCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEE
Q 021628 123 NLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLA 200 (310)
Q Consensus 123 ~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~ 200 (310)
++++++++.+++++.+||+++ ..+++++|++|+|+| +|.+|++++++|+.+ |++ ++++++++++++.++++|++++
T Consensus 155 ~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~ 232 (365)
T cd05279 155 DAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAA-GASRIIAVDINKDKFEKAKQLGATEC 232 (365)
T ss_pred CCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHhCCCee
Confidence 999999999999999999987 578899999999997 799999999999996 886 5666679999999999999888
Q ss_pred eeCCCC--ccc-----ccCCCccEEEeCCCC---hHHHHhhcc-cCCEEEEEeCCCCCCceEE-----------EEe---
Q 021628 201 IDYTKE--NIE-----DLPEKFDVVFDAVGQ---CDKALKAVK-EGGRVVSIIGSVTPPASSF-----------VLT--- 255 (310)
Q Consensus 201 ~~~~~~--~~~-----~~~~~~dvvi~~~g~---~~~~~~~l~-~~G~~v~~g~~~~~~~~~~-----------~~~--- 255 (310)
++..+. ++. ...+++|++||++|. ...++++++ ++|+++.+|.........+ ...
T Consensus 233 v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~ 312 (365)
T cd05279 233 INPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFG 312 (365)
T ss_pred cccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHHhcCCeEEEEecc
Confidence 876554 221 123579999999874 478899999 9999999875431111111 001
Q ss_pred --cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEE
Q 021628 256 --SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306 (310)
Q Consensus 256 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi 306 (310)
...+.+..+++++.++.+++....+++|+++++++|++.+.+++.. |.++
T Consensus 313 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~ 364 (365)
T cd05279 313 GWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL 364 (365)
T ss_pred CCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence 2346788899999999988654567899999999999998876654 6554
No 70
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=1.2e-34 Score=256.06 Aligned_cols=288 Identities=26% Similarity=0.368 Sum_probs=227.3
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||+++.++++ ++++ +.|.|++.++||+||+.++++|++|.....|.++ +|.++|||++|+|+++|++
T Consensus 1 ~~a~~~~~~~~----~~~~-~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~-----~~~~~G~e~~G~Vv~~G~~-- 68 (319)
T cd08242 1 MKALVLDGGLD----LRVE-DLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP-----FPGVPGHEFVGIVEEGPEA-- 68 (319)
T ss_pred CeeEEEeCCCc----EEEE-ECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC-----CCCccCceEEEEEEEeCCC--
Confidence 89999998664 5999 8999999999999999999999999999888652 5778999999999999988
Q ss_pred CCCCCCeeEeecCc------------------cccCCC-CCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628 81 KFKVGDEVYGDINE------------------KALDHP-KRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~------------------~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 141 (310)
+++||+|...+.. ....+. ...|+|++|++++.+.++++|++++.++++.+ ..+.+++.
T Consensus 69 -~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~ 146 (319)
T cd08242 69 -ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALE 146 (319)
T ss_pred -CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHH
Confidence 6799999753211 111111 23689999999999999999999999888764 34446776
Q ss_pred HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeC
Q 021628 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDA 221 (310)
Q Consensus 142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~ 221 (310)
+++..+++++++|+|+| +|.+|++++++|+.+ |+++++++.++++++.++++|++.+++..+. ....++|++||+
T Consensus 147 ~~~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~d~vid~ 221 (319)
T cd08242 147 ILEQVPITPGDKVAVLG-DGKLGLLIAQVLALT-GPDVVLVGRHSEKLALARRLGVETVLPDEAE---SEGGGFDVVVEA 221 (319)
T ss_pred HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHcCCcEEeCcccc---ccCCCCCEEEEC
Confidence 66788899999999998 899999999999996 9999999999999999999998887766432 223579999999
Q ss_pred CCC---hHHHHhhcccCCEEEEEeCCCCCCceE---E------EEecCHHHHHHHHHHHHcCCeeEEecCCcccchhhHH
Q 021628 222 VGQ---CDKALKAVKEGGRVVSIIGSVTPPASS---F------VLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTL 289 (310)
Q Consensus 222 ~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (310)
.|. ...++++++++|+++..+.......+. + ........++++++++.++.+++...+++.|++++++
T Consensus 222 ~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~ 301 (319)
T cd08242 222 TGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCGPFAPALRLLRKGLVDVDPLITAVYPLEEAL 301 (319)
T ss_pred CCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEecccHHHHHHHHHcCCCChhhceEEEEeHHHHH
Confidence 874 478889999999999876432111110 0 0111112488899999999985433356899999999
Q ss_pred HHHHHHHcCCCCccEEEEe
Q 021628 290 EAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 290 ~a~~~~~~~~~~~k~vi~~ 308 (310)
+|++.+.++. .+|+++++
T Consensus 302 ~a~~~~~~~~-~~k~vi~~ 319 (319)
T cd08242 302 EAFERAAEPG-ALKVLLRP 319 (319)
T ss_pred HHHHHHhcCC-ceEEEeCC
Confidence 9999998666 47888763
No 71
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=1.2e-34 Score=260.48 Aligned_cols=295 Identities=27% Similarity=0.375 Sum_probs=238.4
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||+++..++.. ++++ +.+.|++.++||+|++.++++|++|...+.|.++ ..+|.++|+|++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~---~~~~-~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~---~~~~~~~g~e~~G~V~~vG~~v~ 73 (363)
T cd08279 1 MRAAVLHEVGKP---LEIE-EVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP---APLPAVLGHEGAGVVEEVGPGVT 73 (363)
T ss_pred CeEEEEecCCCC---ceEE-EeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC---CCCCccccccceEEEEEeCCCcc
Confidence 999999998765 7888 8999999999999999999999999998888663 34577899999999999999999
Q ss_pred CCCCCCeeEeecCc--------------cccC------------------------CCCCCCcceeEEEEecCccccCCC
Q 021628 81 KFKVGDEVYGDINE--------------KALD------------------------HPKRNGSLAEYTAVEENLLALKPK 122 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~--------------~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~ 122 (310)
.+++||+|++.+.. .... .....|+|++|+.++.+.++++|+
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~ 153 (363)
T cd08279 74 GVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDD 153 (363)
T ss_pred ccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCC
Confidence 99999999985210 0000 002358999999999999999999
Q ss_pred CCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEE
Q 021628 123 NLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLA 200 (310)
Q Consensus 123 ~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~ 200 (310)
++++++++.+++++.+||+++ ...++++|++|+|+| +|.+|++++++|+.+ |++ ++++++++++.+.++++|++++
T Consensus 154 ~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~-G~~~Vi~~~~~~~~~~~~~~~g~~~v 231 (363)
T cd08279 154 DIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIA-GASRIIAVDPVPEKLELARRFGATHT 231 (363)
T ss_pred CCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCcEEEEcCCHHHHHHHHHhCCeEE
Confidence 999999999999999999987 578899999999996 799999999999996 986 8888889999999999999888
Q ss_pred eeCCCCcccc----c--CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC------------ceEEEEe----
Q 021628 201 IDYTKENIED----L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP------------ASSFVLT---- 255 (310)
Q Consensus 201 ~~~~~~~~~~----~--~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~------------~~~~~~~---- 255 (310)
++.+..++.. . .+++|+++|+++. ....+++++++|+++.++...... ...+...
T Consensus 232 v~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (363)
T cd08279 232 VNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGS 311 (363)
T ss_pred eCCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecC
Confidence 8776543221 1 3579999999873 478899999999999987533100 1011100
Q ss_pred -cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccE
Q 021628 256 -SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKV 304 (310)
Q Consensus 256 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~ 304 (310)
...+.++++++++.++.+.+...+++.|+++++++|++.+.+++..+.+
T Consensus 312 ~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 361 (363)
T cd08279 312 ANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGV 361 (363)
T ss_pred cCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEE
Confidence 2356788999999999987542345789999999999999888776333
No 72
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=3.9e-34 Score=253.97 Aligned_cols=296 Identities=32% Similarity=0.441 Sum_probs=241.7
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
||++++..+++. +.++ +.|.|++.+++|+|++.++++|++|++...|.++. ...|.++|||++|+|+++|+++.
T Consensus 1 m~a~~~~~~~~~---~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~v~~~G~~v~ 74 (332)
T cd08259 1 MKAAILHKPNKP---LQIE-EVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR--GKYPLILGHEIVGTVEEVGEGVE 74 (332)
T ss_pred CeEEEEecCCCc---eEEE-EccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC--CCCCeeccccceEEEEEECCCCc
Confidence 999999874443 6888 89999999999999999999999999999887642 34578999999999999999999
Q ss_pred CCCCCCeeEeecCccc------------------cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628 81 KFKVGDEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (310)
.+++||+|+++..... ..+....|+|++|++++...++++|+++++++++.+++++.+||++
T Consensus 75 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~ 154 (332)
T cd08259 75 RFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHA 154 (332)
T ss_pred cCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHH
Confidence 9999999998642100 0011226899999999999999999999999999999999999999
Q ss_pred HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc---cCCCccEEE
Q 021628 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED---LPEKFDVVF 219 (310)
Q Consensus 143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~dvvi 219 (310)
++.+++.++++++|+|++|.+|++++++++.. |.+++.+++++++.+.+++++.+.+++.++ +.. ...++|+++
T Consensus 155 l~~~~~~~~~~vlI~ga~g~vG~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~v~ 231 (332)
T cd08259 155 LKRAGVKKGDTVLVTGAGGGVGIHAIQLAKAL-GARVIAVTRSPEKLKILKELGADYVIDGSK--FSEDVKKLGGADVVI 231 (332)
T ss_pred HHHhCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHcCCcEEEecHH--HHHHHHhccCCCEEE
Confidence 96688999999999999999999999999996 999999999999999998888877776543 111 123799999
Q ss_pred eCCCC--hHHHHhhcccCCEEEEEeCCCCC-----------CceEEEE--ecCHHHHHHHHHHHHcCCeeEEecCCcccc
Q 021628 220 DAVGQ--CDKALKAVKEGGRVVSIIGSVTP-----------PASSFVL--TSDGSILEKLNPYFESGKVKAIIDPKGPFP 284 (310)
Q Consensus 220 ~~~g~--~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (310)
+++|. ...++++++++|+++.++..... ....+.. .....+++++++++.++.+++. +++.|+
T Consensus 232 ~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~ 309 (332)
T cd08259 232 ELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKIKPV--IDRVVS 309 (332)
T ss_pred ECCChHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCccc--eeEEEc
Confidence 99884 57889999999999998754211 0111111 1235678899999999998764 467899
Q ss_pred hhhHHHHHHHHHcCCCCccEEEE
Q 021628 285 FSQTLEAFSHLESSRATGKVVIH 307 (310)
Q Consensus 285 ~~~~~~a~~~~~~~~~~~k~vi~ 307 (310)
+++++++++.+.++...+|++++
T Consensus 310 ~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 310 LEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHHHHHHHHHHHcCCcccEEEeC
Confidence 99999999999988888888864
No 73
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=2.8e-34 Score=256.25 Aligned_cols=296 Identities=29% Similarity=0.398 Sum_probs=238.5
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
||++++.+++.+ .++ +.+.|++.+++|+||+.++++|++|+....|.++ +..+|.++|+|++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~~----~~~-~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~--~~~~~~~~g~~~~G~V~~~G~~v~ 73 (343)
T cd08235 1 MKAAVLHGPNDV----RLE-EVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT--DLKPPRILGHEIAGEIVEVGDGVT 73 (343)
T ss_pred CeEEEEecCCce----EEE-EccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc--cCCCCcccccceEEEEEeeCCCCC
Confidence 899999988754 888 8999999999999999999999999999888653 234577899999999999999999
Q ss_pred CCCCCCeeEeecCccc------------------cCCCCCCCcceeEEEEecCc-----cccCCCCCChhhhccccchHH
Q 021628 81 KFKVGDEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENL-----LALKPKNLSFVEAASLPLATE 137 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~-----~~~ip~~~~~~~aa~~~~~~~ 137 (310)
.+++||+|++...... ..+....|+|++|+.++... ++++|+++++.+++.+ +.+.
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ 152 (343)
T cd08235 74 GFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLA 152 (343)
T ss_pred CCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHH
Confidence 9999999998632000 00112469999999999998 9999999999999876 7888
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCcccc------
Q 021628 138 TAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED------ 210 (310)
Q Consensus 138 ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------ 210 (310)
+||+++...++++|++|+|+| +|.+|++++++|+.+ |.+ ++++++++++.+.+++++.++++++++.++..
T Consensus 153 ~a~~~l~~~~~~~g~~VlV~g-~g~vg~~~~~la~~~-g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~ 230 (343)
T cd08235 153 CCINAQRKAGIKPGDTVLVIG-AGPIGLLHAMLAKAS-GARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELT 230 (343)
T ss_pred HHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHHHHHHh
Confidence 999999766899999999997 799999999999996 998 88888899999988889998888776554322
Q ss_pred cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCC--C----------ceEEE--EecCHHHHHHHHHHHHcCCe
Q 021628 211 LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP--P----------ASSFV--LTSDGSILEKLNPYFESGKV 273 (310)
Q Consensus 211 ~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~--~----------~~~~~--~~~~~~~~~~~~~~~~~~~~ 273 (310)
..+++|+++|+++. ....+++++++|+++.++..... . ...+. .....+.++.+++++.++.+
T Consensus 231 ~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l 310 (343)
T cd08235 231 DGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIASGKI 310 (343)
T ss_pred CCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHcCCC
Confidence 12469999999873 47889999999999998754321 1 11111 11235678889999999988
Q ss_pred eEEecCCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628 274 KAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH 307 (310)
Q Consensus 274 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~ 307 (310)
++...+...|++++++++++.+.+++ .+|+++.
T Consensus 311 ~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 311 DVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred ChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 64222356899999999999999888 8888863
No 74
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=6.7e-34 Score=252.41 Aligned_cols=294 Identities=30% Similarity=0.383 Sum_probs=238.8
Q ss_pred CEEEEEcccCCC-ccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628 1 MKAWVYKEYGNS-QSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (310)
Q Consensus 1 mka~~~~~~g~~-~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~ 79 (310)
||++++.+++++ .+.++++ +.+.|.+.++||+||+.++++|++|+....|.++. ..+|.++|||++|+|+++|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~V~~vG~~v 77 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLT-EVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP--PKLPLIPGHEIVGRVEAVGPGV 77 (329)
T ss_pred CeEEEEecCCCCCCCCceEE-eccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC--CCCCccccccccEEEEEECCCC
Confidence 899999988841 0236888 78888899999999999999999999999887642 3568899999999999999999
Q ss_pred CCCCCCCeeEeecCc-------c------------ccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHH
Q 021628 80 KKFKVGDEVYGDINE-------K------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY 140 (310)
Q Consensus 80 ~~~~~Gd~V~~~~~~-------~------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~ 140 (310)
+++++||+|++.+.. . ...+....|+|++|+.++...++++|+++++.+++.+++++.+||
T Consensus 78 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~ 157 (329)
T cd08298 78 TRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGY 157 (329)
T ss_pred CCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHH
Confidence 999999999863110 0 001111368999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEe
Q 021628 141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFD 220 (310)
Q Consensus 141 ~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~ 220 (310)
++++.++++++++|+|+| +|.+|++++++++.. |.+++++++++++.+.++++|++.+++.... ..+++|++++
T Consensus 158 ~~~~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~vD~vi~ 231 (329)
T cd08298 158 RALKLAGLKPGQRLGLYG-FGASAHLALQIARYQ-GAEVFAFTRSGEHQELARELGADWAGDSDDL----PPEPLDAAII 231 (329)
T ss_pred HHHHhhCCCCCCEEEEEC-CcHHHHHHHHHHHHC-CCeEEEEcCChHHHHHHHHhCCcEEeccCcc----CCCcccEEEE
Confidence 999889999999999998 899999999999996 9999999999999999999999877765432 1347899999
Q ss_pred CCC---ChHHHHhhcccCCEEEEEeCCCC-CCceEE-------EE----ecCHHHHHHHHHHHHcCCeeEEecCCcccch
Q 021628 221 AVG---QCDKALKAVKEGGRVVSIIGSVT-PPASSF-------VL----TSDGSILEKLNPYFESGKVKAIIDPKGPFPF 285 (310)
Q Consensus 221 ~~g---~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~-------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (310)
+.+ ..+.++++++++|+++.+|.... ...+++ .+ ......+..+++++.++.+++. ++.|++
T Consensus 232 ~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l~~~---~~~~~~ 308 (329)
T cd08298 232 FAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYELLWGEKTIRSVANLTRQDGEEFLKLAAEIPIKPE---VETYPL 308 (329)
T ss_pred cCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhhhhCceEEEEecCCCHHHHHHHHHHHHcCCCCce---EEEEeH
Confidence 865 35889999999999998874321 111111 00 1234668889999999988763 478999
Q ss_pred hhHHHHHHHHHcCCCCccEEE
Q 021628 286 SQTLEAFSHLESSRATGKVVI 306 (310)
Q Consensus 286 ~~~~~a~~~~~~~~~~~k~vi 306 (310)
+++++|++.+.+++..+|+++
T Consensus 309 ~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 309 EEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred HHHHHHHHHHHcCCCcceeeC
Confidence 999999999999888888764
No 75
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=4.6e-34 Score=255.51 Aligned_cols=296 Identities=43% Similarity=0.669 Sum_probs=237.8
Q ss_pred CEEEEEcccCCCccceEEeccccCCCC-CCCcEEEEEeEeecCHHHHHHHhCCCCC-------------CCCCCCccccc
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSA-------------TDSPLPTIPGY 66 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~-------------~~~~~p~~~G~ 66 (310)
|||+++.++|++.+.++++ +.+.|+| +++||+||+.++++|++|+....|.... ....+|.++||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 79 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLE-NARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGR 79 (350)
T ss_pred CceEEecccCCCcceeeec-ccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecc
Confidence 9999999988852357888 8999999 5999999999999999999988774210 02355889999
Q ss_pred ceeEEEEEeCCCCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-Hh
Q 021628 67 DVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ER 145 (310)
Q Consensus 67 e~~G~V~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~ 145 (310)
|++|+|+++|++++++++||+|++.... ...|+|++|+.++...++++|+++++.+++.+++.+.++|+++ +.
T Consensus 80 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~ 153 (350)
T cd08248 80 DCSGVVVDIGSGVKSFEIGDEVWGAVPP------WSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNV 153 (350)
T ss_pred eeEEEEEecCCCcccCCCCCEEEEecCC------CCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHh
Confidence 9999999999999999999999986421 1358999999999999999999999999999999999999998 45
Q ss_pred cccC----CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc---cCCCccEE
Q 021628 146 SAFS----AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED---LPEKFDVV 218 (310)
Q Consensus 146 ~~~~----~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~dvv 218 (310)
+.+. +|++|+|+|++|.+|++++++|+.+ |+++++++++ ++.+.++++|.+.+++.+..++.. ..+++|++
T Consensus 154 ~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~-G~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~vd~v 231 (350)
T cd08248 154 GGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAW-GAHVTTTCST-DAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVI 231 (350)
T ss_pred ccCCCccCCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCc-chHHHHHHhCCceEEECCChhHHHHHHhcCCCCEE
Confidence 6664 4999999998999999999999996 9998887765 577788899988888765433211 13579999
Q ss_pred EeCCCC--hHHHHhhcccCCEEEEEeCCCCC--C-----------ceEE----------------E-EecCHHHHHHHHH
Q 021628 219 FDAVGQ--CDKALKAVKEGGRVVSIIGSVTP--P-----------ASSF----------------V-LTSDGSILEKLNP 266 (310)
Q Consensus 219 i~~~g~--~~~~~~~l~~~G~~v~~g~~~~~--~-----------~~~~----------------~-~~~~~~~~~~~~~ 266 (310)
||+.|. ...++++++++|+++.++..... . ...+ . .......+.++++
T Consensus 232 i~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (350)
T cd08248 232 LDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAK 311 (350)
T ss_pred EECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHH
Confidence 999874 57899999999999998743210 0 0000 0 0112456888999
Q ss_pred HHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628 267 YFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH 307 (310)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~ 307 (310)
++.++.+.+. +++.|++++++++++.+.++...+|++++
T Consensus 312 ~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 312 LVEDGKIKPV--IDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred HHhCCCEecc--cceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 9999998754 56889999999999999888777787763
No 76
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=4.3e-34 Score=255.14 Aligned_cols=295 Identities=28% Similarity=0.402 Sum_probs=236.5
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCC-CCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~-~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~ 79 (310)
||++++..++. ++++ +.+.|++. ++||+||+.++++|++|+....|.++ ..+|.++|+|++|+|+++|+++
T Consensus 1 ~~a~~~~~~~~----~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~---~~~~~~~g~e~~G~V~~vG~~v 72 (344)
T cd08284 1 MKAVVFKGPGD----VRVE-EVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP---STPGFVLGHEFVGEVVEVGPEV 72 (344)
T ss_pred CeeEEEecCCC----ceEE-eccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC---CCCCcccccceEEEEEeeCCCc
Confidence 99999998754 5888 89999985 99999999999999999998888653 3457789999999999999999
Q ss_pred CCCCCCCeeEeecCcc------cc----------------CCCCCCCcceeEEEEecC--ccccCCCCCChhhhccccch
Q 021628 80 KKFKVGDEVYGDINEK------AL----------------DHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLA 135 (310)
Q Consensus 80 ~~~~~Gd~V~~~~~~~------~~----------------~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~ 135 (310)
..+++||+|++.+... +. ......|+|++|+.++.. .++++|+++++++++.+++.
T Consensus 73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~ 152 (344)
T cd08284 73 RTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDI 152 (344)
T ss_pred cccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCc
Confidence 9999999999864100 00 001125899999999965 99999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCcccc----
Q 021628 136 TETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED---- 210 (310)
Q Consensus 136 ~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---- 210 (310)
++|||+++...++.+|++|+|+| +|.+|++++++|+.+ |+ ++++++.++++.+.++++|+. +++.+..++..
T Consensus 153 ~~ta~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~-g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~l~~ 229 (344)
T cd08284 153 LPTGYFGAKRAQVRPGDTVAVIG-CGPVGLCAVLSAQVL-GAARVFAVDPVPERLERAAALGAE-PINFEDAEPVERVRE 229 (344)
T ss_pred hHHHHhhhHhcCCccCCEEEEEC-CcHHHHHHHHHHHHc-CCceEEEEcCCHHHHHHHHHhCCe-EEecCCcCHHHHHHH
Confidence 99999999768889999999997 899999999999996 96 788888888899988999975 34544333211
Q ss_pred --cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCC-----------CCceEEEE--ecCHHHHHHHHHHHHcCC
Q 021628 211 --LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT-----------PPASSFVL--TSDGSILEKLNPYFESGK 272 (310)
Q Consensus 211 --~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~-----------~~~~~~~~--~~~~~~~~~~~~~~~~~~ 272 (310)
..+++|++||++|. ...++++++++|+++.+|.... .....+.. ......+.++++++.++.
T Consensus 230 ~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (344)
T cd08284 230 ATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGR 309 (344)
T ss_pred HhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCC
Confidence 12579999999873 5788999999999999985431 11222221 234567889999999999
Q ss_pred eeEEecCCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628 273 VKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH 307 (310)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~ 307 (310)
+++...+.+.|++++++++++.+.+++. +|++++
T Consensus 310 i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 310 LDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred CChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence 8763334678999999999999888777 898875
No 77
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=7.2e-34 Score=251.62 Aligned_cols=296 Identities=27% Similarity=0.335 Sum_probs=232.7
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||+++..++++ +.++++ +.|.|++.++||+||+.++++|++|+....|.++. ...+|.++|||++|+|+++ +++
T Consensus 1 ~~a~~~~~~~~~-~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~--~~~ 75 (325)
T cd05280 1 FKALVVEEQDGG-VSLFLR-TLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGV-TRNYPHTPGIDAAGTVVSS--DDP 75 (325)
T ss_pred CceEEEcccCCC-CcceEE-eCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCC-CCCCCCccCcccEEEEEEe--CCC
Confidence 999999999875 568999 89999999999999999999999999998887532 2346788999999999998 456
Q ss_pred CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hc--ccC-CCCEEEE
Q 021628 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RS--AFS-AGKSILV 156 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~--~~~-~g~~vlI 156 (310)
.+++||+|++..... +....|+|++|++++.+.++++|+++++.+++.+++++.++++++. .. ... .+++|+|
T Consensus 76 ~~~~Gd~V~~~~~~~---g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI 152 (325)
T cd05280 76 RFREGDEVLVTGYDL---GMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLV 152 (325)
T ss_pred CCCCCCEEEEccccc---CCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEE
Confidence 799999999863111 1123689999999999999999999999999999999999999884 22 335 3579999
Q ss_pred EcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcc---c-ccCCCccEEEeCCCC--hHHHHh
Q 021628 157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI---E-DLPEKFDVVFDAVGQ--CDKALK 230 (310)
Q Consensus 157 ~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~-~~~~~~dvvi~~~g~--~~~~~~ 230 (310)
+|++|.+|++++++|+.+ |++|+++++++++++.++++|++++++...... . ...+++|++||+.|. ...+++
T Consensus 153 ~g~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~ 231 (325)
T cd05280 153 TGATGGVGSIAVAILAKL-GYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGDVLANLLK 231 (325)
T ss_pred ECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEECCchHHHHHHHH
Confidence 998899999999999996 999999999999999999999988887653211 1 113479999999874 588999
Q ss_pred hcccCCEEEEEeCCCCC-----------CceEEEE---ec-C----HHHHHHHHHHHHcCCeeEEecCCcccchhhHHHH
Q 021628 231 AVKEGGRVVSIIGSVTP-----------PASSFVL---TS-D----GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEA 291 (310)
Q Consensus 231 ~l~~~G~~v~~g~~~~~-----------~~~~~~~---~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 291 (310)
+++++|+++.+|..... ....+.. .. . ...++.+.+++..+.... +...|++++++++
T Consensus 232 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a 308 (325)
T cd05280 232 QTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDLLEI---VVREISLEELPEA 308 (325)
T ss_pred hhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCCccc---eeeEecHHHHHHH
Confidence 99999999999854311 0111111 00 1 123445555555553332 3578999999999
Q ss_pred HHHHHcCCCCccEEEEe
Q 021628 292 FSHLESSRATGKVVIHP 308 (310)
Q Consensus 292 ~~~~~~~~~~~k~vi~~ 308 (310)
++.+.+++..||+++++
T Consensus 309 ~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 309 IDRLLAGKHRGRTVVKI 325 (325)
T ss_pred HHHHhcCCcceEEEEeC
Confidence 99999999889998864
No 78
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=3.2e-34 Score=255.50 Aligned_cols=297 Identities=34% Similarity=0.486 Sum_probs=238.6
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||++++.+| + ..++++ +.+.|+++++||+||+.++++|++|+....+.+ ...+|.++|||++|+|+.+|++++
T Consensus 1 m~a~~~~~~~-~-~~~~~~-~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~---~~~~~~~~g~e~~G~v~~vG~~v~ 74 (339)
T cd08249 1 QKAAVLTGPG-G-GLLVVV-DVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF---IPSYPAILGCDFAGTVVEVGSGVT 74 (339)
T ss_pred CceEEeccCC-C-Cccccc-CCCCCCCCCCEEEEEEEEEEcCchheeeeeccc---ccCCCceeeeeeeEEEEEeCCCcC
Confidence 9999999986 4 557888 899999999999999999999999988765543 123467899999999999999999
Q ss_pred CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hccc----------C
Q 021628 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAF----------S 149 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~----------~ 149 (310)
.+++||+|++....... +....|+|++|++++...++++|+++++.+++.+++.+.+||+++. ..+. +
T Consensus 75 ~~~~Gd~V~~~~~~~~~-~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~ 153 (339)
T cd08249 75 RFKVGDRVAGFVHGGNP-NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPAS 153 (339)
T ss_pred cCCCCCEEEEEeccccC-CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCC
Confidence 99999999987531100 1123589999999999999999999999999999999999999984 4443 7
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc-----cCCCccEEEeCCCC
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVGQ 224 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~dvvi~~~g~ 224 (310)
++++|+|+|++|.+|++++++|+.+ |++++.++ ++++++.++++|.+++++.+..++.. ..+++|++||++|.
T Consensus 154 ~~~~vlI~ga~g~vg~~~~~~a~~~-G~~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~ 231 (339)
T cd08249 154 KGKPVLIWGGSSSVGTLAIQLAKLA-GYKVITTA-SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCIST 231 (339)
T ss_pred CCCEEEEEcChhHHHHHHHHHHHHc-CCeEEEEE-CcccHHHHHhcCCCEEEECCCchHHHHHHHhcCCCeeEEEEeecc
Confidence 8999999998899999999999996 99998877 56888999999998888876544321 23579999999874
Q ss_pred ---hHHHHhhccc--CCEEEEEeCCCCC----CceEE---EE-e----------cCHHHHHHHHHHHHcCCeeEEecCCc
Q 021628 225 ---CDKALKAVKE--GGRVVSIIGSVTP----PASSF---VL-T----------SDGSILEKLNPYFESGKVKAIIDPKG 281 (310)
Q Consensus 225 ---~~~~~~~l~~--~G~~v~~g~~~~~----~~~~~---~~-~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (310)
...+++++++ +|+++.++..... ..... .. . .....+..+++++.++++.+.. ..
T Consensus 232 ~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~ 309 (339)
T cd08249 232 PESAQLCAEALGRSGGGKLVSLLPVPEETEPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHP--VR 309 (339)
T ss_pred chHHHHHHHHHhccCCCEEEEecCCCccccCCCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCC--ce
Confidence 4789999999 9999999855321 11111 10 0 1124577889999999988642 34
Q ss_pred ccc--hhhHHHHHHHHHcCC-CCccEEEEe
Q 021628 282 PFP--FSQTLEAFSHLESSR-ATGKVVIHP 308 (310)
Q Consensus 282 ~~~--~~~~~~a~~~~~~~~-~~~k~vi~~ 308 (310)
.++ ++++++|++.+.+++ ..+|+++++
T Consensus 310 ~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 310 VVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred ecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 566 999999999999888 888998864
No 79
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=4.1e-34 Score=258.00 Aligned_cols=296 Identities=27% Similarity=0.347 Sum_probs=233.7
Q ss_pred CEEEEEcccCCCccceEEeccccCCCC-CCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~ 79 (310)
||++++.+++. ++++ +.|.|++ +++||+||+.++++|++|++...|.++ ..+|.++|||++|+|+++|+++
T Consensus 1 m~~~~~~~~~~----~~~~-~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~---~~~p~~~g~e~~G~V~~vG~~v 72 (375)
T cd08282 1 MKAVVYGGPGN----VAVE-DVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG---AEPGLVLGHEAMGEVEEVGSAV 72 (375)
T ss_pred CceEEEecCCc----eeEE-eCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC---CCCCceeccccEEEEEEeCCCC
Confidence 89999987765 4888 8999986 899999999999999999999988764 3468899999999999999999
Q ss_pred CCCCCCCeeEeecCcccc----------------------------CCCCCCCcceeEEEEecC--ccccCCCCCChh--
Q 021628 80 KKFKVGDEVYGDINEKAL----------------------------DHPKRNGSLAEYTAVEEN--LLALKPKNLSFV-- 127 (310)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~~----------------------------~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~-- 127 (310)
+.+++||+|++.+..... .....+|+|++|+.+|.. .++++|+++++.
T Consensus 73 ~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~ 152 (375)
T cd08282 73 ESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEK 152 (375)
T ss_pred CcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhh
Confidence 999999999874210000 001125899999999976 899999999998
Q ss_pred -hhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCC
Q 021628 128 -EAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTK 205 (310)
Q Consensus 128 -~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~ 205 (310)
+++.+++++.+||+++..+++++|++|+|.| .|.+|++++++|+.+ |+ +++++++++++.+.++++|+. .++.++
T Consensus 153 ~~~a~~~~~~~ta~~a~~~~~~~~g~~vlI~g-~g~vg~~~~~~a~~~-G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~~ 229 (375)
T cd08282 153 DDYLMLSDIFPTGWHGLELAGVQPGDTVAVFG-AGPVGLMAAYSAILR-GASRVYVVDHVPERLDLAESIGAI-PIDFSD 229 (375)
T ss_pred hheeeecchHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHcCCe-EeccCc
Confidence 4677788899999999778899999999987 799999999999996 87 688888899999999999984 455544
Q ss_pred Cccc-----ccCCCccEEEeCCCC--------------hHHHHhhcccCCEEEEEeCCCCC-C----------ceEEE--
Q 021628 206 ENIE-----DLPEKFDVVFDAVGQ--------------CDKALKAVKEGGRVVSIIGSVTP-P----------ASSFV-- 253 (310)
Q Consensus 206 ~~~~-----~~~~~~dvvi~~~g~--------------~~~~~~~l~~~G~~v~~g~~~~~-~----------~~~~~-- 253 (310)
++.. ...+++|+++||+|. +..++++++++|+++.+|..... . ...+.
T Consensus 230 ~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 309 (375)
T cd08282 230 GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFG 309 (375)
T ss_pred ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHH
Confidence 3321 112479999999873 47889999999999887753210 0 00010
Q ss_pred --------E----ecCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 254 --------L----TSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 254 --------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
. ......+..+++++.++++++...+++.|++++++++++.+.++. .+|+++++
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~~ 375 (375)
T cd08282 310 LLWAKGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIKP 375 (375)
T ss_pred HHHhcCcEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 0 002356788899999999986433578999999999999999888 78988753
No 80
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=8.8e-34 Score=252.47 Aligned_cols=297 Identities=31% Similarity=0.402 Sum_probs=237.7
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||++++.++.+ ++. +.+.|++.++||+|++.++++|+.|+....+.++. ..+|.++|+|++|+|+.+|++++
T Consensus 1 ~~a~~~~~~~~~----~~~-~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~--~~~~~~~g~e~~G~V~~~G~~v~ 73 (337)
T cd08261 1 MKALVCEKPGRL----EVV-DIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPF--ASYPRILGHELSGEVVEVGEGVA 73 (337)
T ss_pred CeEEEEeCCCce----EEE-ECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCc--CCCCcccccccEEEEEEeCCCCC
Confidence 899999987654 888 89999999999999999999999999988886542 24577899999999999999999
Q ss_pred CCCCCCeeEeecCcc------c---c---------CCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628 81 KFKVGDEVYGDINEK------A---L---------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~------~---~---------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (310)
.+++||+|++..... + . -+....|+|++|+.++.+ ++++|+++++++++.+ ..+++++++
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~ 151 (337)
T cd08261 74 GLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHA 151 (337)
T ss_pred CCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHH
Confidence 999999998742100 0 0 001136899999999999 9999999999999877 567788888
Q ss_pred HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCcc
Q 021628 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFD 216 (310)
Q Consensus 143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~d 216 (310)
+...++.+|++|+|+| +|.+|.+++++|+.+ |.+++++.+++++.+.++++|.+++++..+.++.. ..+++|
T Consensus 152 ~~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~-g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd 229 (337)
T cd08261 152 VRRAGVTAGDTVLVVG-AGPIGLGVIQVAKAR-GARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGAD 229 (337)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCCCC
Confidence 8778899999999997 799999999999996 99999999999999999999999998876544321 124699
Q ss_pred EEEeCCCC---hHHHHhhcccCCEEEEEeCCCCC----------CceEEEE--ecCHHHHHHHHHHHHcCCeeEEecCCc
Q 021628 217 VVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP----------PASSFVL--TSDGSILEKLNPYFESGKVKAIIDPKG 281 (310)
Q Consensus 217 vvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~----------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (310)
+++|+.|. ....+++|+++|+++.++....+ ..+.+.. ....+.++.+++++.++.+++...+..
T Consensus 230 ~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~ 309 (337)
T cd08261 230 VVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALITH 309 (337)
T ss_pred EEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhheEE
Confidence 99999863 47889999999999988744311 1111211 123457888999999999886211356
Q ss_pred ccchhhHHHHHHHHHcC-CCCccEEEEe
Q 021628 282 PFPFSQTLEAFSHLESS-RATGKVVIHP 308 (310)
Q Consensus 282 ~~~~~~~~~a~~~~~~~-~~~~k~vi~~ 308 (310)
.+++++++++++.+.++ ...+|+++++
T Consensus 310 ~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 310 RFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred EeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 89999999999999888 4778988864
No 81
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.4e-33 Score=248.26 Aligned_cols=300 Identities=34% Similarity=0.443 Sum_probs=245.1
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||+++...+.. +.++++ +.+.|.+.++||+||+.++++|++|++...|.++. ....|.++|||++|+|+++|+.++
T Consensus 1 ~~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~G~~~~ 77 (336)
T cd08276 1 MKAWRLSGGGGL-DNLKLV-EEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPP-PVKDPLIPLSDGAGEVVAVGEGVT 77 (336)
T ss_pred CeEEEEeccCCC-cceEEE-eccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCC-CCCCCcccccceeEEEEEeCCCCc
Confidence 999999988655 668888 88888899999999999999999999988886643 224678899999999999999999
Q ss_pred CCCCCCeeEeecCccc------------cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-Hhcc
Q 021628 81 KFKVGDEVYGDINEKA------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSA 147 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~ 147 (310)
++++||+|++...... ..+....|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++ +...
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~ 157 (336)
T cd08276 78 RFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGP 157 (336)
T ss_pred CCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcC
Confidence 9999999998642100 01122368899999999999999999999999999999999999998 4678
Q ss_pred cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCC-Ccccc------cCCCccEEEe
Q 021628 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIED------LPEKFDVVFD 220 (310)
Q Consensus 148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~------~~~~~dvvi~ 220 (310)
+++|++|+|+| +|.+|++++++++.+ |++++++++++++.+.+.++|.+.+++... .++.. ..+++|++||
T Consensus 158 ~~~g~~vli~g-~g~~g~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 235 (336)
T cd08276 158 LKPGDTVLVQG-TGGVSLFALQFAKAA-GARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVE 235 (336)
T ss_pred CCCCCEEEEEC-CcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEE
Confidence 99999999996 899999999999996 999999999999999998899888887654 33211 1247999999
Q ss_pred CCCC--hHHHHhhcccCCEEEEEeCCCCC-----------CceEEEE--ecCHHHHHHHHHHHHcCCeeEEecCCcccch
Q 021628 221 AVGQ--CDKALKAVKEGGRVVSIIGSVTP-----------PASSFVL--TSDGSILEKLNPYFESGKVKAIIDPKGPFPF 285 (310)
Q Consensus 221 ~~g~--~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (310)
+.+. ...++++++++|+++.+|..... ....+.. ......+.++++++.++.+.+. .++.|++
T Consensus 236 ~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~ 313 (336)
T cd08276 236 VGGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIRPV--IDRVFPF 313 (336)
T ss_pred CCChHHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCCcccc--cCcEEeH
Confidence 9873 57899999999999999854321 1111111 1235678889999998888764 4688999
Q ss_pred hhHHHHHHHHHcCCCCccEEEE
Q 021628 286 SQTLEAFSHLESSRATGKVVIH 307 (310)
Q Consensus 286 ~~~~~a~~~~~~~~~~~k~vi~ 307 (310)
++++++++.+.++...+|++++
T Consensus 314 ~~~~~a~~~~~~~~~~~kvv~~ 335 (336)
T cd08276 314 EEAKEAYRYLESGSHFGKVVIR 335 (336)
T ss_pred HHHHHHHHHHHhCCCCceEEEe
Confidence 9999999999988888898875
No 82
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.8e-33 Score=250.13 Aligned_cols=294 Identities=35% Similarity=0.471 Sum_probs=236.6
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||+++.++++. ++. +.+.|++.++||+||+.++++|++|+....|.++ ..+|.++|+|++|+|+.+|++++
T Consensus 1 ~~a~~~~~~~~~----~~~-~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~---~~~p~~~g~~~~G~v~~vG~~v~ 72 (334)
T cd08234 1 MKALVYEGPGEL----EVE-EVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFG---AAPPLVPGHEFAGVVVAVGSKVT 72 (334)
T ss_pred CeeEEecCCCce----EEE-eccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCC---CCCCcccccceEEEEEEeCCCCC
Confidence 999999988754 888 8999999999999999999999999998888763 23678899999999999999999
Q ss_pred CCCCCCeeEeecCccc----c--------------CCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628 81 KFKVGDEVYGDINEKA----L--------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~----~--------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (310)
.+++||+|++...... . .+....|++++|++++.+.++++|++++..+++.. +.+.+++++
T Consensus 73 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~ 151 (334)
T cd08234 73 GFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHG 151 (334)
T ss_pred CCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHH
Confidence 9999999987321100 0 01114689999999999999999999999988766 677889998
Q ss_pred HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCccc----ccCCCccE
Q 021628 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIE----DLPEKFDV 217 (310)
Q Consensus 143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~dv 217 (310)
+..+++++|++|+|+| +|.+|.+++++|+.+ |++ ++++++++++.+.++++|.+.+++.+..+.. ...+++|+
T Consensus 152 l~~~~~~~g~~vlI~g-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~vd~ 229 (334)
T cd08234 152 LDLLGIKPGDSVLVFG-AGPIGLLLAQLLKLN-GASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNPYGFDV 229 (334)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHHHHhcCCCCcE
Confidence 8778899999999997 799999999999996 987 7788889999999999998877776544321 12357999
Q ss_pred EEeCCCC---hHHHHhhcccCCEEEEEeCCCCC------------CceEEE-EecCHHHHHHHHHHHHcCCeeEEecCCc
Q 021628 218 VFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP------------PASSFV-LTSDGSILEKLNPYFESGKVKAIIDPKG 281 (310)
Q Consensus 218 vi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (310)
+||+.|. ....+++++++|+++.+|..... ....+. .......++++++++.++.+.+...+..
T Consensus 230 v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 309 (334)
T cd08234 230 VIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPYTFPRAIALLESGKIDVKGLVSH 309 (334)
T ss_pred EEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCHHHHHHHHHHHHcCCCChhhhEEE
Confidence 9999863 47889999999999999754321 111111 1234567889999999999875433457
Q ss_pred ccchhhHHHHHHHHHcCCCCccEEE
Q 021628 282 PFPFSQTLEAFSHLESSRATGKVVI 306 (310)
Q Consensus 282 ~~~~~~~~~a~~~~~~~~~~~k~vi 306 (310)
.|++++++++++.+.+ ...+|+++
T Consensus 310 ~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 310 RLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred EecHHHHHHHHHHHhc-CCceEEEe
Confidence 8999999999999988 66778876
No 83
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.5e-33 Score=247.41 Aligned_cols=293 Identities=30% Similarity=0.421 Sum_probs=238.6
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
||++++...+.. ..+++. +.+.|++.++||+||+.++++|++|+....+.++ ....|.++|||++|+|+++|. .
T Consensus 1 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~--~ 74 (320)
T cd08243 1 MKAIVIEQPGGP-EVLKLR-EIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSP--SVKFPRVLGIEAVGEVEEAPG--G 74 (320)
T ss_pred CeEEEEcCCCCc-cceEEe-ecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC--CCCCCccccceeEEEEEEecC--C
Confidence 899999988866 667887 7888889999999999999999999998887653 234578899999999999995 5
Q ss_pred CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hcccCCCCEEEEEcC
Q 021628 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG 159 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g~ 159 (310)
.+++||+|+++..+.. ....|+|++|+.++...++++|+++++.+++.+++++.+||+++. ...+++|++|+|+|+
T Consensus 75 ~~~~Gd~V~~~~~~~~---~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga 151 (320)
T cd08243 75 TFTPGQRVATAMGGMG---RTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGG 151 (320)
T ss_pred CCCCCCEEEEecCCCC---CCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 7999999998753221 123589999999999999999999999999999999999999984 577899999999998
Q ss_pred CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc----ccCCCccEEEeCCCC--hHHHHhhcc
Q 021628 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE----DLPEKFDVVFDAVGQ--CDKALKAVK 233 (310)
Q Consensus 160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~dvvi~~~g~--~~~~~~~l~ 233 (310)
+|.+|++++++|+.+ |++++.+++++++.+.++++|+++++... .++. ...+++|+++|++|. ....+++++
T Consensus 152 ~g~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~i~~~~~~~d~vl~~~~~~~~~~~~~~l~ 229 (320)
T cd08243 152 TSSVGLAALKLAKAL-GATVTATTRSPERAALLKELGADEVVIDD-GAIAEQLRAAPGGFDKVLELVGTATLKDSLRHLR 229 (320)
T ss_pred CChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEecC-ccHHHHHHHhCCCceEEEECCChHHHHHHHHHhc
Confidence 899999999999996 99999999999999999999988876432 2211 114579999999874 578899999
Q ss_pred cCCEEEEEeCCCCC---------------CceEEEEe----cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHH
Q 021628 234 EGGRVVSIIGSVTP---------------PASSFVLT----SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSH 294 (310)
Q Consensus 234 ~~G~~v~~g~~~~~---------------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 294 (310)
++|+++.+|..... ....+... .....+..+++++.++.+++. +++.|+++++++|++.
T Consensus 230 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~a~~~ 307 (320)
T cd08243 230 PGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDIP--PSKVFTFDEIVEAHAY 307 (320)
T ss_pred cCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHHCCceecc--cccEEcHHHHHHHHHH
Confidence 99999999853110 01111110 112457788999999998763 4678999999999999
Q ss_pred HHcCCCCccEEE
Q 021628 295 LESSRATGKVVI 306 (310)
Q Consensus 295 ~~~~~~~~k~vi 306 (310)
+.++...+|+++
T Consensus 308 ~~~~~~~~kvvv 319 (320)
T cd08243 308 MESNRAFGKVVV 319 (320)
T ss_pred HHhCCCCCcEEe
Confidence 988888788775
No 84
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=2.6e-33 Score=248.01 Aligned_cols=294 Identities=26% Similarity=0.346 Sum_probs=234.6
Q ss_pred EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (310)
Q Consensus 2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~ 81 (310)
||+++...+.+ +.++++ +.|.|.++++||+||+.++++|++|++.+.|.++. ...+|.++|||++|+|+. .+++.
T Consensus 1 ~a~~~~~~~~~-~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~V~~--~~~~~ 75 (323)
T TIGR02823 1 KALVVEKEDGK-VSAQVE-TLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGV-VRSYPMIPGIDAAGTVVS--SEDPR 75 (323)
T ss_pred CeEEEccCCCC-cceeEe-ecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCC-CCCCCccceeeeEEEEEe--cCCCC
Confidence 78999998877 788999 99999999999999999999999999998887632 234588899999999988 56678
Q ss_pred CCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH---hcccCCCC-EEEEE
Q 021628 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE---RSAFSAGK-SILVL 157 (310)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~---~~~~~~g~-~vlI~ 157 (310)
+++||+|++..... +....|++++|+.+|.+.++++|+++++++++.+++.+.+++.++. ...+.+|+ +|+|+
T Consensus 76 ~~~Gd~V~~~~~~~---~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ 152 (323)
T TIGR02823 76 FREGDEVIVTGYGL---GVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVT 152 (323)
T ss_pred CCCCCEEEEccCCC---CCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEE
Confidence 99999999864211 1123689999999999999999999999999999999999988773 34588999 99999
Q ss_pred cCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc---ccCCCccEEEeCCCC--hHHHHhhc
Q 021628 158 GGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE---DLPEKFDVVFDAVGQ--CDKALKAV 232 (310)
Q Consensus 158 g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~dvvi~~~g~--~~~~~~~l 232 (310)
|++|.+|++++++|+.+ |++++++++++++.+.++++|++.+++.++.+.. ....++|+++||+|. ....++++
T Consensus 153 g~~g~vg~~~~~la~~~-G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l 231 (323)
T TIGR02823 153 GATGGVGSLAVAILSKL-GYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEKERWAGAVDTVGGHTLANVLAQL 231 (323)
T ss_pred cCCcHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHhcCCcEEEccccHHHHHHHhcCCCceEEEECccHHHHHHHHHHh
Confidence 98899999999999996 9999999998888899999999888876543221 112358999999883 57889999
Q ss_pred ccCCEEEEEeCCCC-----------CCceEEEEe----c----CHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHH
Q 021628 233 KEGGRVVSIIGSVT-----------PPASSFVLT----S----DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFS 293 (310)
Q Consensus 233 ~~~G~~v~~g~~~~-----------~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 293 (310)
+++|+++.+|.... .....+... . ....+..+.+++..+.+... .+.|+++++++|++
T Consensus 232 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~a~~ 308 (323)
T TIGR02823 232 KYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESI---TREITLEELPEALE 308 (323)
T ss_pred CCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCc---eeeecHHHHHHHHH
Confidence 99999999985421 111111110 0 12235566677777776542 35899999999999
Q ss_pred HHHcCCCCccEEEE
Q 021628 294 HLESSRATGKVVIH 307 (310)
Q Consensus 294 ~~~~~~~~~k~vi~ 307 (310)
.+.+++..+|++++
T Consensus 309 ~~~~~~~~~k~vv~ 322 (323)
T TIGR02823 309 QILAGQHRGRTVVD 322 (323)
T ss_pred HHhCCCccceEEEe
Confidence 99999988898875
No 85
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=9.7e-34 Score=253.01 Aligned_cols=296 Identities=24% Similarity=0.283 Sum_probs=231.5
Q ss_pred CEEEEEcccCCCccceEEeccccCCCC-CCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~ 79 (310)
||+++++.+++. +++ +.|.|++ +++||+||+.++++|++|+..+.|.++ ...|.++|||++|+|+++|+++
T Consensus 1 m~~~~~~~~~~~----~~~-~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~---~~~~~~~g~e~~G~V~~vG~~v 72 (345)
T cd08287 1 MRATVIHGPGDI----RVE-EVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP---TRAPAPIGHEFVGVVEEVGSEV 72 (345)
T ss_pred CceeEEecCCce----eEE-eCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC---CCCCcccccceEEEEEEeCCCC
Confidence 999999987755 888 8999986 999999999999999999998888653 2357889999999999999999
Q ss_pred CCCCCCCeeEeec-Cc-----------------cccCCCCCCCcceeEEEEecC--ccccCCCCCChhhhc-----cccc
Q 021628 80 KKFKVGDEVYGDI-NE-----------------KALDHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAA-----SLPL 134 (310)
Q Consensus 80 ~~~~~Gd~V~~~~-~~-----------------~~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa-----~~~~ 134 (310)
.++++||+|++.. .. ....+....|+|++|++++.+ .++++|+++++..+. .+..
T Consensus 73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~ 152 (345)
T cd08287 73 TSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSD 152 (345)
T ss_pred CccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhc
Confidence 9999999998721 10 001112345999999999975 999999999872221 1225
Q ss_pred hHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCcccc---
Q 021628 135 ATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED--- 210 (310)
Q Consensus 135 ~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--- 210 (310)
.+.+|++++..+++++|++|+|.| +|.+|++++++|+.+ |++ ++++.+++++.+.++++|+++++++....+..
T Consensus 153 ~~~~a~~~~~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~-G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~ 230 (345)
T cd08287 153 VMGTGHHAAVSAGVRPGSTVVVVG-DGAVGLCAVLAAKRL-GAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVR 230 (345)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHHHHH
Confidence 678899998778899999999987 899999999999996 986 66667788888888999999988876543211
Q ss_pred ---cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC----------ceEEEEe--cCHHHHHHHHHHHHcCC
Q 021628 211 ---LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVLT--SDGSILEKLNPYFESGK 272 (310)
Q Consensus 211 ---~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~~--~~~~~~~~~~~~~~~~~ 272 (310)
...++|+++|++|. ...++++++++|+++.++...... ...+... .....+.++++++.++.
T Consensus 231 ~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (345)
T cd08287 231 ELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDVLAGR 310 (345)
T ss_pred HhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHHHcCC
Confidence 12479999999863 588999999999999987543111 1111111 22467889999999999
Q ss_pred eeEEecCCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628 273 VKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH 307 (310)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~ 307 (310)
+++...+++.|++++++++++.+.++... |++|+
T Consensus 311 l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 344 (345)
T cd08287 311 INPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLR 344 (345)
T ss_pred CCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence 88643346789999999999998876654 88875
No 86
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=5.4e-33 Score=247.24 Aligned_cols=295 Identities=35% Similarity=0.532 Sum_probs=240.6
Q ss_pred CEEEEEcccCCCcc---ceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCC
Q 021628 1 MKAWVYKEYGNSQS---VLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGS 77 (310)
Q Consensus 1 mka~~~~~~g~~~~---~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~ 77 (310)
|||+++++++++ + .++++ +.+.|++.+++|+||+.++++|++|+..+.+.++ ...+|.++|||++|+|+.+|+
T Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~ 76 (336)
T cd08252 1 MKAIGFTQPLPI-TDPDSLIDI-ELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAP--VPGQPKILGWDASGVVEAVGS 76 (336)
T ss_pred CceEEecCCCCC-CcccceeEc-cCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCC--CCCCCcccccceEEEEEEcCC
Confidence 899999999887 4 47777 7898999999999999999999999998877653 234567899999999999999
Q ss_pred CCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCC-----C
Q 021628 78 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSA-----G 151 (310)
Q Consensus 78 ~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~-----g 151 (310)
+++.+++||+|++... ....|+|++|+.++...++++|++++.++++.+++++.+||+++ +.+.+.+ |
T Consensus 77 ~v~~~~~Gd~V~~~~~------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g 150 (336)
T cd08252 77 EVTLFKVGDEVYYAGD------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEG 150 (336)
T ss_pred CCCCCCCCCEEEEcCC------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCC
Confidence 9999999999998531 01368999999999999999999999999999999999999997 5677776 9
Q ss_pred CEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHHHcCCCEEeeCCCCccc----c-cCCCccEEEeCCC--
Q 021628 152 KSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLGADLAIDYTKENIE----D-LPEKFDVVFDAVG-- 223 (310)
Q Consensus 152 ~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~-~~~~~dvvi~~~g-- 223 (310)
++|+|+|++|.+|++++++|+.+ | ++++++++++++.+.++++|.+++++.+. ++. . ..+++|++||++|
T Consensus 151 ~~vlV~g~~g~vg~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~i~~~~~~~~d~vl~~~~~~ 228 (336)
T cd08252 151 KTLLIIGGAGGVGSIAIQLAKQL-TGLTVIATASRPESIAWVKELGADHVINHHQ-DLAEQLEALGIEPVDYIFCLTDTD 228 (336)
T ss_pred CEEEEEcCCchHHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHhcCCcEEEeCCc-cHHHHHHhhCCCCCCEEEEccCcH
Confidence 99999998999999999999996 8 99999999999999999999988887653 221 1 1247999999987
Q ss_pred -ChHHHHhhcccCCEEEEEeCCCC--------CCceEEEE---e-----------cCHHHHHHHHHHHHcCCeeEEec-C
Q 021628 224 -QCDKALKAVKEGGRVVSIIGSVT--------PPASSFVL---T-----------SDGSILEKLNPYFESGKVKAIID-P 279 (310)
Q Consensus 224 -~~~~~~~~l~~~G~~v~~g~~~~--------~~~~~~~~---~-----------~~~~~~~~~~~~~~~~~~~~~~~-~ 279 (310)
....++++++++|+++.+|.... .....+.. . .....+.++++++.++.+.+... .
T Consensus 229 ~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 308 (336)
T cd08252 229 QHWDAMAELIAPQGHICLIVDPQEPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTET 308 (336)
T ss_pred HHHHHHHHHhcCCCEEEEecCCCCcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeee
Confidence 35788999999999999975420 11111111 0 01245778999999999986421 1
Q ss_pred CcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628 280 KGPFPFSQTLEAFSHLESSRATGKVVIH 307 (310)
Q Consensus 280 ~~~~~~~~~~~a~~~~~~~~~~~k~vi~ 307 (310)
.+.+++++++++++.+.++...+|++++
T Consensus 309 ~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 309 LGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred ecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 2468999999999999998888888764
No 87
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.2e-32 Score=243.53 Aligned_cols=297 Identities=45% Similarity=0.689 Sum_probs=242.1
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||+++.+++.+ +.++++ +.+.|++.+++|+|++.++++|++|+....+.+. .....|.++|||++|+|+.+|++++
T Consensus 1 ~~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~~g~e~~G~v~~~G~~~~ 77 (326)
T cd08272 1 MKALVLESFGGP-EVFELR-EVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAA-ARPPLPAILGCDVAGVVEAVGEGVT 77 (326)
T ss_pred CeEEEEccCCCc-hheEEe-ecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCC-CCCCCCcccccceeEEEEEeCCCCC
Confidence 999999999887 678888 7888889999999999999999999998877653 1233577899999999999999999
Q ss_pred CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 021628 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG 159 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~ 159 (310)
.+++||+|++...+.+ ...|+|++|+.++...++++|+++++..++.+++.+.+||+++ +..++++|++++|+|+
T Consensus 78 ~~~~Gd~V~~~~~~~~----~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~ 153 (326)
T cd08272 78 RFRVGDEVYGCAGGLG----GLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGG 153 (326)
T ss_pred CCCCCCEEEEccCCcC----CCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 9999999998753211 1358999999999999999999999999999999999999997 6789999999999999
Q ss_pred CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhh
Q 021628 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKA 231 (310)
Q Consensus 160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~ 231 (310)
++.+|++++++++.. |.+++.++++ ++.+.++++|.+.+++.... +.. ..+++|+++|+.+. ....+++
T Consensus 154 ~~~~g~~~~~~a~~~-g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~ 230 (326)
T cd08272 154 AGGVGHVAVQLAKAA-GARVYATASS-EKAAFARSLGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTVGGETLDASFEA 230 (326)
T ss_pred CCcHHHHHHHHHHHc-CCEEEEEech-HHHHHHHHcCCCEEEecchh-HHHHHHHhcCCCCCcEEEECCChHHHHHHHHH
Confidence 999999999999996 9999999888 88888988998887765443 221 12479999999874 4778999
Q ss_pred cccCCEEEEEeCCCC-------CCceEEEE---ec----------CHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHH
Q 021628 232 VKEGGRVVSIIGSVT-------PPASSFVL---TS----------DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEA 291 (310)
Q Consensus 232 l~~~G~~v~~g~~~~-------~~~~~~~~---~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 291 (310)
++++|+++.++.... .....+.. .. ....+..+++++.++.+++.+.. +.|++++++++
T Consensus 231 l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-~~~~~~~~~~~ 309 (326)
T cd08272 231 VALYGRVVSILGGATHDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDP-RTFPLEEAAAA 309 (326)
T ss_pred hccCCEEEEEecCCccchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCccccccc-ceecHHHHHHH
Confidence 999999998874320 11111111 00 13467788899999988754222 78999999999
Q ss_pred HHHHHcCCCCccEEEEe
Q 021628 292 FSHLESSRATGKVVIHP 308 (310)
Q Consensus 292 ~~~~~~~~~~~k~vi~~ 308 (310)
++.+.++...+|+++++
T Consensus 310 ~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 310 HARLESGSARGKIVIDV 326 (326)
T ss_pred HHHHHcCCcccEEEEEC
Confidence 99998888788988764
No 88
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=3e-33 Score=247.87 Aligned_cols=298 Identities=24% Similarity=0.312 Sum_probs=226.5
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||+++.++|+. +.+.++ +.|.|.+.++||+||+.++++|++|.....+... ....+|.++|||++|+|++.| +.
T Consensus 1 ~~a~~~~~~~~~-~~~~~~-~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~-~~~~~~~~~g~e~~G~V~~~~--~~ 75 (326)
T cd08289 1 FQALVVEKDEDD-VSVSVK-NLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGK-IVKRYPFIPGIDLAGTVVESN--DP 75 (326)
T ss_pred CeeEEEeccCCc-ceeEEE-EccCCCCCCCeEEEEEEEEecChHHhhhhcCCcc-ccCCCCcCcccceeEEEEEcC--CC
Confidence 999999999886 678888 8999999999999999999999999876643211 123457889999999999954 56
Q ss_pred CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHh---ccc-CCCCEEEE
Q 021628 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER---SAF-SAGKSILV 156 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~---~~~-~~g~~vlI 156 (310)
++++||+|++..... +....|+|++|+.++.+.++++|+++++++++.+++++.||++++.. ... ..+++|+|
T Consensus 76 ~~~~Gd~V~~~~~~~---~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI 152 (326)
T cd08289 76 RFKPGDEVIVTSYDL---GVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLV 152 (326)
T ss_pred CCCCCCEEEEccccc---CCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEE
Confidence 799999999864211 12346999999999999999999999999999999999999988732 233 34789999
Q ss_pred EcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc---c-cCCCccEEEeCCCC--hHHHHh
Q 021628 157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE---D-LPEKFDVVFDAVGQ--CDKALK 230 (310)
Q Consensus 157 ~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~-~~~~~dvvi~~~g~--~~~~~~ 230 (310)
+|++|.+|.+++++|+.+ |++++++++++++.+.++++|++++++.++.... . ..+++|++||++|. ...+++
T Consensus 153 ~g~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~ 231 (326)
T cd08289 153 TGATGGVGSLAVSILAKL-GYEVVASTGKADAADYLKKLGAKEVIPREELQEESIKPLEKQRWAGAVDPVGGKTLAYLLS 231 (326)
T ss_pred EcCCchHHHHHHHHHHHC-CCeEEEEecCHHHHHHHHHcCCCEEEcchhHHHHHHHhhccCCcCEEEECCcHHHHHHHHH
Confidence 998899999999999996 9999999999999999999999888876542111 1 13479999999884 578999
Q ss_pred hcccCCEEEEEeCCCC---C--------CceEEEE---ecC-HHHHHHHHHHHHcCCeeE---EecCCcccchhhHHHHH
Q 021628 231 AVKEGGRVVSIIGSVT---P--------PASSFVL---TSD-GSILEKLNPYFESGKVKA---IIDPKGPFPFSQTLEAF 292 (310)
Q Consensus 231 ~l~~~G~~v~~g~~~~---~--------~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~ 292 (310)
+++++|+++.+|.... + ....+.. ... .......++.+.+ .+.+ ...+.+.|+++++++|+
T Consensus 232 ~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~ 310 (326)
T cd08289 232 TLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEAL 310 (326)
T ss_pred HhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHH
Confidence 9999999999986421 1 1111111 000 1112223332222 1211 01236889999999999
Q ss_pred HHHHcCCCCccEEEEe
Q 021628 293 SHLESSRATGKVVIHP 308 (310)
Q Consensus 293 ~~~~~~~~~~k~vi~~ 308 (310)
+.+.+++..+|+++++
T Consensus 311 ~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 311 KQILQGRVTGRTVVKL 326 (326)
T ss_pred HHHhcCcccceEEEeC
Confidence 9999999889998864
No 89
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=1.3e-32 Score=244.80 Aligned_cols=302 Identities=37% Similarity=0.497 Sum_probs=243.7
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||+++...+.+ ..++++ +.+.|++.+++|+||+.++++|.+|+..+.|..+ ....+|..+|||++|+|+.+|+++.
T Consensus 1 ~~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~-~~~~~~~~~g~e~~G~v~~~G~~~~ 77 (342)
T cd08266 1 MKAVVIRGHGGP-EVLEYG-DLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPG-IKLPLPHILGSDGAGVVEAVGPGVT 77 (342)
T ss_pred CeEEEEecCCCc-cceeEe-ecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCC-CCCCCCeecccceEEEEEEeCCCCC
Confidence 999999976665 667888 7888889999999999999999999998887543 1245688899999999999999998
Q ss_pred CCCCCCeeEeecCcc------------------ccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628 81 KFKVGDEVYGDINEK------------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (310)
.+++||+|++.+... ...+....|++++|+.++.+.++++|+++++.+++.+++++.+++++
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~ 157 (342)
T cd08266 78 NVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHM 157 (342)
T ss_pred CCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHH
Confidence 999999999863210 00111236889999999999999999999999999999999999999
Q ss_pred H-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCc
Q 021628 143 L-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKF 215 (310)
Q Consensus 143 l-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~ 215 (310)
+ +..+++++++++|+|+.+.+|++++++++.. |.+++++++++++.+.+++++.+.+++....+... ..+++
T Consensus 158 l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (342)
T cd08266 158 LVTRARLRPGETVLVHGAGSGVGSAAIQIAKLF-GATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGV 236 (342)
T ss_pred HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCCC
Confidence 7 5788999999999998889999999999996 99999999999999988888877777654433211 12479
Q ss_pred cEEEeCCCC--hHHHHhhcccCCEEEEEeCCCCC-C----------ceEEEE--ecCHHHHHHHHHHHHcCCeeEEecCC
Q 021628 216 DVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP-P----------ASSFVL--TSDGSILEKLNPYFESGKVKAIIDPK 280 (310)
Q Consensus 216 dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~~~~-~----------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (310)
|++++++|. ....+++++++|+++.++..... . ...+.. ......+..+++++.++.+++. ++
T Consensus 237 d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~ 314 (342)
T cd08266 237 DVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKLKPV--ID 314 (342)
T ss_pred cEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCcccc--ee
Confidence 999999884 57889999999999999754311 1 111111 1234578889999999988764 46
Q ss_pred cccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 281 GPFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 281 ~~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
+.|++++++++++.+.++...+|+++++
T Consensus 315 ~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 315 SVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred eeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 8899999999999998888788998763
No 90
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=4.2e-33 Score=248.71 Aligned_cols=295 Identities=29% Similarity=0.412 Sum_probs=234.3
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||+++++++++ .++ +.+.|++.++||+||+.++++|++|+....+.+ ....|.++|+|++|+|+.+|+++.
T Consensus 1 ~~a~~~~~~~~l----~~~-~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~---~~~~~~~~g~~~~G~V~~~g~~v~ 72 (343)
T cd08236 1 MKALVLTGPGDL----RYE-DIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG---AYHPPLVLGHEFSGTVEEVGSGVD 72 (343)
T ss_pred CeeEEEecCCce----eEE-ecCCCCCCCCeEEEEEEEEEECccchHhhcCCC---CCCCCcccCcceEEEEEEECCCCC
Confidence 999999998754 888 899999999999999999999999998887754 223577899999999999999999
Q ss_pred CCCCCCeeEeecCccc------------------cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628 81 KFKVGDEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (310)
.+++||+|++++.... ..+....|+|++|+.+|.+.++++|+++++++++.+ ..+.+||++
T Consensus 73 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~ 151 (343)
T cd08236 73 DLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHA 151 (343)
T ss_pred cCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHH
Confidence 9999999998632100 011124689999999999999999999999999887 577899999
Q ss_pred HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCcccc----c-CCCcc
Q 021628 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED----L-PEKFD 216 (310)
Q Consensus 143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~-~~~~d 216 (310)
+...+++++++|+|+| +|.+|.+++++|+.+ |.+ ++++++++++.+.++++|.+.+++.+...... . .+++|
T Consensus 152 l~~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~-G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~d 229 (343)
T cd08236 152 VRLAGITLGDTVVVIG-AGTIGLLAIQWLKIL-GAKRVIAVDIDDEKLAVARELGADDTINPKEEDVEKVRELTEGRGAD 229 (343)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCCEEecCccccHHHHHHHhCCCCCC
Confidence 9777889999999997 799999999999996 997 88888888999999999988888765433111 1 23699
Q ss_pred EEEeCCCC---hHHHHhhcccCCEEEEEeCCCCC-------------CceEEE---Eec----CHHHHHHHHHHHHcCCe
Q 021628 217 VVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP-------------PASSFV---LTS----DGSILEKLNPYFESGKV 273 (310)
Q Consensus 217 vvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~-------------~~~~~~---~~~----~~~~~~~~~~~~~~~~~ 273 (310)
++|||.|. ...++++|+++|+++.+|..... ....+. ... ..+.++++++++.++.+
T Consensus 230 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 309 (343)
T cd08236 230 LVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKI 309 (343)
T ss_pred EEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCC
Confidence 99999863 47889999999999999744211 111111 111 14567889999999987
Q ss_pred eEEecCCcccchhhHHHHHHHHHc-CCCCccEEE
Q 021628 274 KAIIDPKGPFPFSQTLEAFSHLES-SRATGKVVI 306 (310)
Q Consensus 274 ~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~k~vi 306 (310)
.+.......+++++++++++.+.+ +...+|+++
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 310 KVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred ChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 522123578999999999999988 566677764
No 91
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=3.3e-33 Score=245.50 Aligned_cols=283 Identities=46% Similarity=0.634 Sum_probs=227.5
Q ss_pred cceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCC--CCCCcccccceeEE---EEEeC-CCCCCCCCCCe
Q 021628 14 SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD--SPLPTIPGYDVAGV---VEKVG-SQVKKFKVGDE 87 (310)
Q Consensus 14 ~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~--~~~p~~~G~e~~G~---V~~~g-~~~~~~~~Gd~ 87 (310)
.....+ +.+.|.+.+++++|++.++++|+.|+.+..|.+.... ..+|.+++.++.|. +...| ..+.....||+
T Consensus 18 ~~~~~~-~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~ 96 (347)
T KOG1198|consen 18 EVLFSE-EVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDA 96 (347)
T ss_pred ceEEee-cccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeE
Confidence 444545 8899999999999999999999999999998875432 35776666555555 34444 22344667776
Q ss_pred eEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-Hhc------ccCCCCEEEEEcCC
Q 021628 88 VYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERS------AFSAGKSILVLGGA 160 (310)
Q Consensus 88 V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~------~~~~g~~vlI~g~~ 160 (310)
+..+.. .|+|++|.++|...++++|+++++.++|++|++..|||.++ ... +.++|++|||+|++
T Consensus 97 ~~~~~~---------~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggs 167 (347)
T KOG1198|consen 97 VVAFLS---------SGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGS 167 (347)
T ss_pred EeeccC---------CCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCC
Confidence 666543 79999999999999999999999999999999999999999 567 79999999999999
Q ss_pred cchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccccc-----CCCccEEEeCCCC--hHHHHhhcc
Q 021628 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL-----PEKFDVVFDAVGQ--CDKALKAVK 233 (310)
Q Consensus 161 g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~dvvi~~~g~--~~~~~~~l~ 233 (310)
|++|.+|+|+|+.. ++..++++.++++.++++++|+++++++++++..+. .+++|+||||.|. ......++.
T Consensus 168 ggVG~~aiQlAk~~-~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg~~~~~~~~~~l~ 246 (347)
T KOG1198|consen 168 GGVGTAAIQLAKHA-GAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDCVGGSTLTKSLSCLL 246 (347)
T ss_pred cHHHHHHHHHHHhc-CCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEECCCCCccccchhhhc
Confidence 99999999999996 788899999999999999999999999998765443 4479999999874 467778888
Q ss_pred cCCEEEEEeCCC---C--CCc---------------------eEEEEecCHHHHHHHHHHHHcCCeeEEecCCcccchhh
Q 021628 234 EGGRVVSIIGSV---T--PPA---------------------SSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQ 287 (310)
Q Consensus 234 ~~G~~v~~g~~~---~--~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (310)
..|+...++... . ... ..+......+.++++.++++++++++.+ -+.||+++
T Consensus 247 ~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i--~~~~p~~~ 324 (347)
T KOG1198|consen 247 KGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKPVI--DSVYPFSQ 324 (347)
T ss_pred cCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccCCc--ceeeeHHH
Confidence 887644333211 0 100 0011233568899999999999888864 58999999
Q ss_pred HHHHHHHHHcCCCCccEEEEeC
Q 021628 288 TLEAFSHLESSRATGKVVIHPI 309 (310)
Q Consensus 288 ~~~a~~~~~~~~~~~k~vi~~~ 309 (310)
+.+|++.+.++...||++++++
T Consensus 325 ~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 325 AKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred HHHHHHHHhhcCCcceEEEEec
Confidence 9999999999999999999876
No 92
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=3.7e-33 Score=248.89 Aligned_cols=299 Identities=27% Similarity=0.334 Sum_probs=227.8
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCC-CCCCCCCCcccccceeEEEEEeCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF-SATDSPLPTIPGYDVAGVVEKVGSQV 79 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~~g~~~ 79 (310)
||++++.++++. +++. +.|.|++.++||+||+.++++|++|+.++.+.. ......+|.++|||++|+|+++|+++
T Consensus 1 ~~~~~~~~~~~~---~~~~-~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v 76 (341)
T PRK05396 1 MKALVKLKAEPG---LWLT-DVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEV 76 (341)
T ss_pred CceEEEecCCCc---eEEE-ECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCC
Confidence 999999988864 7888 899999999999999999999999998776532 11123467789999999999999999
Q ss_pred CCCCCCCeeEeecCccc------------------cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628 80 KKFKVGDEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (310)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 141 (310)
+++++||+|++.+.-.+ ..+...+|+|++|+.++.+.++++|+++++.+++.+ ..+.++++
T Consensus 77 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~ 155 (341)
T PRK05396 77 TGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVH 155 (341)
T ss_pred CcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHH
Confidence 99999999987521100 001123689999999999999999999999888754 45555665
Q ss_pred HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCC
Q 021628 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEK 214 (310)
Q Consensus 142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~ 214 (310)
++.. ...+|++|+|.| +|.+|++++++|+.+ |+ +++++..++++.+.++++|++++++.++.++.. ..++
T Consensus 156 ~~~~-~~~~g~~vlV~~-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 232 (341)
T PRK05396 156 TALS-FDLVGEDVLITG-AGPIGIMAAAVAKHV-GARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEG 232 (341)
T ss_pred HHHc-CCCCCCeEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCC
Confidence 5532 346899999987 799999999999996 98 577777788899999999999988776544321 1357
Q ss_pred ccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC----------ceEEEE---ecCHHHHHHHHHHHHcCCeeEEec
Q 021628 215 FDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVL---TSDGSILEKLNPYFESGKVKAIID 278 (310)
Q Consensus 215 ~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 278 (310)
+|+||||.|. ....+++++++|+++.+|...... ...+.. ....+.+..+++++.++ ++....
T Consensus 233 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 311 (341)
T PRK05396 233 FDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSG-LDLSPI 311 (341)
T ss_pred CCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcC-CChhHh
Confidence 9999999873 578899999999999998643111 111111 11224456788888888 322222
Q ss_pred CCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628 279 PKGPFPFSQTLEAFSHLESSRATGKVVIHPI 309 (310)
Q Consensus 279 ~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~ 309 (310)
+.+.|++++++++++.+.++. .+|++++++
T Consensus 312 ~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~ 341 (341)
T PRK05396 312 ITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD 341 (341)
T ss_pred eEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence 457899999999999998877 789998764
No 93
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=1.8e-32 Score=240.36 Aligned_cols=294 Identities=46% Similarity=0.674 Sum_probs=240.5
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCC-CCCCCCCcccccceeEEEEEeCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFS-ATDSPLPTIPGYDVAGVVEKVGSQV 79 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~-~~~~~~p~~~G~e~~G~V~~~g~~~ 79 (310)
||++++..++.. +.++++ +.+.|.++++||+||+.++++|++|+..+.|.+. .....+|..+|||++|+|+.+|+++
T Consensus 1 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~ 78 (309)
T cd05289 1 MKAVRIHEYGGP-EVLELA-DVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGV 78 (309)
T ss_pred CceEEEcccCCc-cceeec-ccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCC
Confidence 899999998876 667787 7888889999999999999999999998877542 1123457889999999999999999
Q ss_pred CCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hcccCCCCEEEEEc
Q 021628 80 KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLG 158 (310)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g 158 (310)
.++++||+|++.... ...|+|++|+.++...++++|++++...++.+++.+.++++++. ...+.+|++|+|+|
T Consensus 79 ~~~~~G~~V~~~~~~------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g 152 (309)
T cd05289 79 TGFKVGDEVFGMTPF------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHG 152 (309)
T ss_pred CCCCCCCEEEEccCC------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEec
Confidence 999999999986410 12489999999999999999999999999999999999999985 56689999999999
Q ss_pred CCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc--ccCCCccEEEeCCCC--hHHHHhhccc
Q 021628 159 GAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE--DLPEKFDVVFDAVGQ--CDKALKAVKE 234 (310)
Q Consensus 159 ~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~dvvi~~~g~--~~~~~~~l~~ 234 (310)
+.|.+|++++++++.. |.+++++++++ +.+.++++|.+.+++....++. ...+++|++++++|+ ...+++++++
T Consensus 153 ~~g~~g~~~~~~a~~~-g~~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~ 230 (309)
T cd05289 153 AAGGVGSFAVQLAKAR-GARVIATASAA-NADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGGETLARSLALVKP 230 (309)
T ss_pred CCchHHHHHHHHHHHc-CCEEEEEecch-hHHHHHHcCCCEEEeCCCCchhhccCCCCceEEEECCchHHHHHHHHHHhc
Confidence 8899999999999996 99999888877 8888888998888776554433 223479999999884 5789999999
Q ss_pred CCEEEEEeCCCCCC------ceEEE---EecCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEE
Q 021628 235 GGRVVSIIGSVTPP------ASSFV---LTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVV 305 (310)
Q Consensus 235 ~G~~v~~g~~~~~~------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v 305 (310)
+|+++.+|...... ...+. .......+.++++++.++.+.+. +++.|++++++++++.+..+...+|++
T Consensus 231 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv 308 (309)
T cd05289 231 GGRLVSIAGPPPAEQAAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPV--VDRVFPLEDAAEAHERLESGHARGKVV 308 (309)
T ss_pred CcEEEEEcCCCcchhhhhhccceEEEEEecccHHHHHHHHHHHHCCCEEEe--eccEEcHHHHHHHHHHHHhCCCCCcEe
Confidence 99999997543211 11111 11115678899999999998764 478999999999999998887777776
Q ss_pred E
Q 021628 306 I 306 (310)
Q Consensus 306 i 306 (310)
+
T Consensus 309 ~ 309 (309)
T cd05289 309 L 309 (309)
T ss_pred C
Confidence 3
No 94
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=5e-33 Score=246.38 Aligned_cols=289 Identities=33% Similarity=0.472 Sum_probs=226.1
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
||++++..++ . +.++++ +.+.|+++++||+||+.++++|++|+..+.+.. ...+|.++|||++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~-~-~~~~~~-~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~---~~~~~~~~g~e~~G~v~~vG~~v~ 74 (325)
T cd08264 1 MKALVFEKSG-I-ENLKVE-DVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK---VKPMPHIPGAEFAGVVEEVGDHVK 74 (325)
T ss_pred CeeEEeccCC-C-CceEEE-eccCCCCCCCeEEEEEEEEEechHHHHHHhCCC---CCCCCeecccceeEEEEEECCCCC
Confidence 9999998777 4 568888 888888999999999999999999998876421 123577899999999999999999
Q ss_pred CCCCCCeeEeecCccc------------------cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628 81 KFKVGDEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (310)
.+++||+|+..+.-.. ..+....|+|++|++++...++++|+++++++++.+++++.+||++
T Consensus 75 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~ 154 (325)
T cd08264 75 GVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHA 154 (325)
T ss_pred CCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHH
Confidence 9999999987632000 0011136899999999999999999999999999999999999999
Q ss_pred HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCC--cccccCCCccEEEe
Q 021628 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE--NIEDLPEKFDVVFD 220 (310)
Q Consensus 143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~dvvi~ 220 (310)
+...++++|++|+|+|++|.+|++++++|+.+ |.+++++++ .+.++++|++++++.++. ......+++|+|++
T Consensus 155 l~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~-G~~v~~~~~----~~~~~~~g~~~~~~~~~~~~~l~~~~~~~d~vl~ 229 (325)
T cd08264 155 LKTAGLGPGETVVVFGASGNTGIFAVQLAKMM-GAEVIAVSR----KDWLKEFGADEVVDYDEVEEKVKEITKMADVVIN 229 (325)
T ss_pred HHhcCCCCCCEEEEECCCchHHHHHHHHHHHc-CCeEEEEeH----HHHHHHhCCCeeecchHHHHHHHHHhCCCCEEEE
Confidence 97788999999999998899999999999996 999888763 366678998888876431 11111267999999
Q ss_pred CCCC--hHHHHhhcccCCEEEEEeCCC-CCCceE----------EEE--ecCHHHHHHHHHHHHcCCeeEEecCCcccch
Q 021628 221 AVGQ--CDKALKAVKEGGRVVSIIGSV-TPPASS----------FVL--TSDGSILEKLNPYFESGKVKAIIDPKGPFPF 285 (310)
Q Consensus 221 ~~g~--~~~~~~~l~~~G~~v~~g~~~-~~~~~~----------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (310)
++|. ...++++|+++|+++.+|... ....++ ... ....++++++++++....+ . +.+.|++
T Consensus 230 ~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~--~~~~~~~ 305 (325)
T cd08264 230 SLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDLKV--K--VWKTFKL 305 (325)
T ss_pred CCCHHHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcCCc--e--eEEEEcH
Confidence 9884 578999999999999998532 111110 111 0123578889999864442 2 3478999
Q ss_pred hhHHHHHHHHHcCCCCccE
Q 021628 286 SQTLEAFSHLESSRATGKV 304 (310)
Q Consensus 286 ~~~~~a~~~~~~~~~~~k~ 304 (310)
+++++|++.+.++...+|+
T Consensus 306 ~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 306 EEAKEALKELFSKERDGRI 324 (325)
T ss_pred HHHHHHHHHHHcCCCcccc
Confidence 9999999999887766664
No 95
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=7.3e-33 Score=244.96 Aligned_cols=287 Identities=27% Similarity=0.404 Sum_probs=235.4
Q ss_pred EcccCCCcc--ceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 021628 6 YKEYGNSQS--VLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK 83 (310)
Q Consensus 6 ~~~~g~~~~--~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~ 83 (310)
++.++.+ . .++++ +.+.|++.+++|+||+.++++|+.|...+.+.++. ...+|.++|||++|+|+++|++++.++
T Consensus 3 ~~~~~~~-~~~~~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~~G~~v~~~~ 79 (323)
T cd05282 3 YTQFGEP-LPLVLELV-SLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGS-RPPLPAVPGNEGVGVVVEVGSGVSGLL 79 (323)
T ss_pred eCcCCCC-ccceEEeE-eCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCC-CCCCCCcCCcceEEEEEEeCCCCCCCC
Confidence 3445544 3 67888 78889999999999999999999999988776532 234578899999999999999999999
Q ss_pred CCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcc
Q 021628 84 VGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGG 162 (310)
Q Consensus 84 ~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~ 162 (310)
+||+|++... .|+|++|+.++...++++|+++++.+++.+++.+.+||+++ +...+.+|++|+|+|+.|.
T Consensus 80 ~Gd~V~~~~~---------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~ 150 (323)
T cd05282 80 VGQRVLPLGG---------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSA 150 (323)
T ss_pred CCCEEEEeCC---------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccH
Confidence 9999999642 48999999999999999999999999999999999999998 4677899999999998899
Q ss_pred hHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhhccc
Q 021628 163 VGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKAVKE 234 (310)
Q Consensus 163 ~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~l~~ 234 (310)
+|++++++|+.+ |++++++++++++++.++++|++.+++.+..+... ..+++|++|||.|+ ....++++++
T Consensus 151 vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~ 229 (323)
T cd05282 151 VGRMLIQLAKLL-GFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRP 229 (323)
T ss_pred HHHHHHHHHHHC-CCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCC
Confidence 999999999996 99999999999999999999998888776433211 13479999999874 4688999999
Q ss_pred CCEEEEEeCCCCC-----------CceEEEEe--c------C----HHHHHHHHHHHHcCCeeEEecCCcccchhhHHHH
Q 021628 235 GGRVVSIIGSVTP-----------PASSFVLT--S------D----GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEA 291 (310)
Q Consensus 235 ~G~~v~~g~~~~~-----------~~~~~~~~--~------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 291 (310)
+|+++.+|..... ....+... . . ...+.++++++.++.+.+. .++.|++++++++
T Consensus 230 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~a 307 (323)
T cd05282 230 GGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTP--VGAKFPLEDFEEA 307 (323)
T ss_pred CCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccC--ccceecHHHHHHH
Confidence 9999998744211 12222111 0 1 2357788899999998764 4688999999999
Q ss_pred HHHHHcCCCCccEEEE
Q 021628 292 FSHLESSRATGKVVIH 307 (310)
Q Consensus 292 ~~~~~~~~~~~k~vi~ 307 (310)
++.+.++...+|++++
T Consensus 308 ~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 308 VAAAEQPGRGGKVLLT 323 (323)
T ss_pred HHHHhcCCCCceEeeC
Confidence 9999988888888763
No 96
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=5e-33 Score=247.85 Aligned_cols=296 Identities=27% Similarity=0.385 Sum_probs=228.8
Q ss_pred EEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHh-CCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 021628 5 VYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRML-GAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK 83 (310)
Q Consensus 5 ~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~-g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~ 83 (310)
++++.++ ++++ +.+.|++.++||+||+.++++|++|+.... +.++......|.++|+|++|+|+++|+++++++
T Consensus 2 ~~~~~~~----~~~~-~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~ 76 (339)
T cd08232 2 VIHAAGD----LRVE-ERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLA 76 (339)
T ss_pred eeccCCc----eEEE-EcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCC
Confidence 4555555 4999 899999999999999999999999988774 333212234577899999999999999999999
Q ss_pred CCCeeEeecCccc-------------------cC----CCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHH
Q 021628 84 VGDEVYGDINEKA-------------------LD----HPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY 140 (310)
Q Consensus 84 ~Gd~V~~~~~~~~-------------------~~----~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~ 140 (310)
+||+|++.+.... .. .....|+|++|++++.+.++++|+++++++++. ..++.++|
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~ 155 (339)
T cd08232 77 PGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVAL 155 (339)
T ss_pred CCCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHH
Confidence 9999987421000 00 011368999999999999999999999998876 56778899
Q ss_pred HHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCcccc---cCCCcc
Q 021628 141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED---LPEKFD 216 (310)
Q Consensus 141 ~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~d 216 (310)
+++......++++|+|.| +|.+|++++++|+.+ |. +++++++++++.+.++++|.+++++.+..+... ...++|
T Consensus 156 ~~l~~~~~~~~~~VLI~g-~g~vG~~~~~lak~~-G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~vd 233 (339)
T cd08232 156 HAVNRAGDLAGKRVLVTG-AGPIGALVVAAARRA-GAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYAADKGDFD 233 (339)
T ss_pred HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhhhhhhccCCCcc
Confidence 998544333999999987 799999999999996 98 788888888888888999998888776543211 123699
Q ss_pred EEEeCCCC---hHHHHhhcccCCEEEEEeCCCCC----------CceEEEE-ecCHHHHHHHHHHHHcCCeeEEecCCcc
Q 021628 217 VVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP----------PASSFVL-TSDGSILEKLNPYFESGKVKAIIDPKGP 282 (310)
Q Consensus 217 vvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~----------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (310)
+++|+.|. .+..+++|+++|+++.++..... ....+.. ......++++++++.++.+++...+.+.
T Consensus 234 ~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 313 (339)
T cd08232 234 VVFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFDDEFAEAVRLLAAGRIDVRPLITAV 313 (339)
T ss_pred EEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecCHHHHHHHHHHHHcCCCCchhheeEE
Confidence 99999873 47899999999999999754311 1111111 1234568889999999988754334578
Q ss_pred cchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 283 FPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 283 ~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
|++++++++++.+.++...+|+++++
T Consensus 314 ~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 314 FPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred ecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 99999999999998888888999864
No 97
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=2.7e-32 Score=241.57 Aligned_cols=296 Identities=24% Similarity=0.302 Sum_probs=234.8
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||+++.++|.+ +.++++ +.|.|+++++||+||+.++++|++|.....|.++. ...+|.++|||++|+|+. ++++
T Consensus 1 ~~a~~~~~~~~~-~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~V~~--~~~~ 75 (324)
T cd08288 1 FKALVLEKDDGG-TSAELR-ELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGI-VRTFPLVPGIDLAGTVVE--SSSP 75 (324)
T ss_pred CeeEEEeccCCC-cceEEE-ECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccc-cCCCCCccccceEEEEEe--CCCC
Confidence 999999999976 668999 89999999999999999999999999988776521 123577899999999998 6777
Q ss_pred CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH---hcccC-CCCEEEE
Q 021628 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE---RSAFS-AGKSILV 156 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~---~~~~~-~g~~vlI 156 (310)
.+++||+|++.... .+....|+|++|++++.+.++++|++++.++++.+++++++++.++. ..... ++++|+|
T Consensus 76 ~~~~Gd~V~~~~~~---~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI 152 (324)
T cd08288 76 RFKPGDRVVLTGWG---VGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLV 152 (324)
T ss_pred CCCCCCEEEECCcc---CCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEE
Confidence 89999999985310 00112589999999999999999999999999999999999987763 34445 6789999
Q ss_pred EcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc---ccCCCccEEEeCCCC--hHHHHhh
Q 021628 157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE---DLPEKFDVVFDAVGQ--CDKALKA 231 (310)
Q Consensus 157 ~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~dvvi~~~g~--~~~~~~~ 231 (310)
+|++|.+|++++++|+.+ |+++++++.++++.+.++++|+++++++++.... ....++|.++|+++. ....+.+
T Consensus 153 ~ga~g~vg~~~~~~A~~~-G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 231 (324)
T cd08288 153 TGAAGGVGSVAVALLARL-GYEVVASTGRPEEADYLRSLGASEIIDRAELSEPGRPLQKERWAGAVDTVGGHTLANVLAQ 231 (324)
T ss_pred ECCCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhHhhhhhccCcccEEEECCcHHHHHHHHHH
Confidence 998899999999999996 9999999999999999999999998887643321 112368899999985 4677788
Q ss_pred cccCCEEEEEeCCCC-----------CCceEEEE----e----cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHH
Q 021628 232 VKEGGRVVSIIGSVT-----------PPASSFVL----T----SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAF 292 (310)
Q Consensus 232 l~~~G~~v~~g~~~~-----------~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 292 (310)
++.+|+++.+|.... .....+.. . ...+.+..+++++.++.+.+. .+.++++++++++
T Consensus 232 ~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~~~~~~~~~a~ 308 (324)
T cd08288 232 TRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEAL---TREIPLADVPDAA 308 (324)
T ss_pred hcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCcccc---ceeecHHHHHHHH
Confidence 899999999875321 11111111 0 012356677778888877642 5789999999999
Q ss_pred HHHHcCCCCccEEEEe
Q 021628 293 SHLESSRATGKVVIHP 308 (310)
Q Consensus 293 ~~~~~~~~~~k~vi~~ 308 (310)
+.+.+++..+|+++++
T Consensus 309 ~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 309 EAILAGQVRGRVVVDV 324 (324)
T ss_pred HHHhcCCccCeEEEeC
Confidence 9999999889998864
No 98
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.7e-32 Score=243.42 Aligned_cols=288 Identities=31% Similarity=0.472 Sum_probs=237.4
Q ss_pred EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (310)
Q Consensus 2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~ 81 (310)
||+++...+.+ ..++++ +.+.|.+.+++|+||+.++++|++|+..+.|.++.. ..+|.++|||++|+|+.+|+++..
T Consensus 2 ~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~vG~~v~~ 78 (331)
T cd08273 2 REVVVTRRGGP-EVLKVV-EADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQ-PPLPFTPGYDLVGRVDALGSGVTG 78 (331)
T ss_pred eeEEEccCCCc-ccEEEe-ccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCC-CCCCcccccceEEEEEEeCCCCcc
Confidence 89999999987 789999 899999999999999999999999999888765322 246889999999999999999999
Q ss_pred CCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCC
Q 021628 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGA 160 (310)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~ 160 (310)
+++||+|++... .|+|++|+.++...++++|++++..+++.+++++.+||+++ +...+++|++|+|+|+.
T Consensus 79 ~~~Gd~V~~~~~---------~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~ 149 (331)
T cd08273 79 FEVGDRVAALTR---------VGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGAS 149 (331)
T ss_pred CCCCCEEEEeCC---------CcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCC
Confidence 999999999742 48999999999999999999999999999999999999998 45789999999999988
Q ss_pred cchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc---ccCCCccEEEeCCCC--hHHHHhhcccC
Q 021628 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE---DLPEKFDVVFDAVGQ--CDKALKAVKEG 235 (310)
Q Consensus 161 g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~dvvi~~~g~--~~~~~~~l~~~ 235 (310)
|.+|++++++|+.. |++++.++. +++.+.++++|...+ +.+..++. ...+++|++++++|. ...++++++++
T Consensus 150 g~ig~~~~~~a~~~-g~~v~~~~~-~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~ 226 (331)
T cd08273 150 GGVGQALLELALLA-GAEVYGTAS-ERNHAALRELGATPI-DYRTKDWLPAMLTPGGVDVVFDGVGGESYEESYAALAPG 226 (331)
T ss_pred cHHHHHHHHHHHHc-CCEEEEEeC-HHHHHHHHHcCCeEE-cCCCcchhhhhccCCCceEEEECCchHHHHHHHHHhcCC
Confidence 99999999999996 999988887 888888888986543 33322211 123479999999874 57889999999
Q ss_pred CEEEEEeCCCCCCc-------------------e-------EE-EEec--------CHHHHHHHHHHHHcCCeeEEecCC
Q 021628 236 GRVVSIIGSVTPPA-------------------S-------SF-VLTS--------DGSILEKLNPYFESGKVKAIIDPK 280 (310)
Q Consensus 236 G~~v~~g~~~~~~~-------------------~-------~~-~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 280 (310)
|+++.+|....... . .+ .... ..+.+.++++++.++.+++. .+
T Consensus 227 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~--~~ 304 (331)
T cd08273 227 GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPK--IA 304 (331)
T ss_pred CEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCC--cc
Confidence 99999986431110 0 00 0000 12567889999999998763 46
Q ss_pred cccchhhHHHHHHHHHcCCCCccEEE
Q 021628 281 GPFPFSQTLEAFSHLESSRATGKVVI 306 (310)
Q Consensus 281 ~~~~~~~~~~a~~~~~~~~~~~k~vi 306 (310)
+.|++++++++++.+.++...+|+++
T Consensus 305 ~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 305 KRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred eEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 78999999999999988888888775
No 99
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=9.2e-33 Score=246.32 Aligned_cols=299 Identities=29% Similarity=0.359 Sum_probs=230.3
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCC-CCCCCCCCcccccceeEEEEEeCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF-SATDSPLPTIPGYDVAGVVEKVGSQV 79 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~~g~~~ 79 (310)
||+++++..|.. +++. +.+.|+++++||+||+.++++|++|+..+.+.. ......+|.++|||++|+|+.+|+++
T Consensus 1 ~~~~~~~~~~~~---~~~~-~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v 76 (341)
T cd05281 1 MKAIVKTKAGPG---AELV-EVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGV 76 (341)
T ss_pred CcceEEecCCCc---eEEE-eCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCC
Confidence 999999987753 7888 899999999999999999999999988765421 11123456789999999999999999
Q ss_pred CCCCCCCeeEeecCcc------------------ccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628 80 KKFKVGDEVYGDINEK------------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (310)
Q Consensus 80 ~~~~~Gd~V~~~~~~~------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 141 (310)
+.+++||+|++..... .+.+....|+|++|++++.+.++++|++++.+.+ .++..+.++++
T Consensus 77 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~ 155 (341)
T cd05281 77 TRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNAVH 155 (341)
T ss_pred CCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHh-hhhhHHHHHHH
Confidence 9999999998852100 0001123689999999999999999999998544 56667778888
Q ss_pred HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCccc-----ccCCCc
Q 021628 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIE-----DLPEKF 215 (310)
Q Consensus 142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~ 215 (310)
++. ...++|++|+|.| +|.+|++++++|+.. |. +++++.+++++.+.++++|.+++++.+..++. ...+++
T Consensus 156 ~~~-~~~~~g~~vlV~g-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v 232 (341)
T cd05281 156 TVL-AGDVSGKSVLITG-CGPIGLMAIAVAKAA-GASLVIASDPNPYRLELAKKMGADVVINPREEDVVEVKSVTDGTGV 232 (341)
T ss_pred HHH-hcCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCcceeeCcccccHHHHHHHcCCCCC
Confidence 775 4557999999987 799999999999996 88 68888778889998899999888876544332 112479
Q ss_pred cEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC-----------ceEEEE---ecCHHHHHHHHHHHHcCCeeEEec
Q 021628 216 DVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP-----------ASSFVL---TSDGSILEKLNPYFESGKVKAIID 278 (310)
Q Consensus 216 dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~-----------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 278 (310)
|++||++|. ....+++|+++|+++.+|...... ...+.. ....+.+.++++++.++.+.+...
T Consensus 233 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 312 (341)
T cd05281 233 DVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPV 312 (341)
T ss_pred CEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHh
Confidence 999999873 478899999999999987543111 111111 112355778999999999864333
Q ss_pred CCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 279 PKGPFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 279 ~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
+...+++++++++++.+.++. .+|+++++
T Consensus 313 ~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 313 ITHKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred eEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 457789999999999999888 88998764
No 100
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=2.5e-32 Score=240.77 Aligned_cols=291 Identities=37% Similarity=0.547 Sum_probs=238.8
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
||++++.+.+.+ ..++++ +.+.|.+.+++|+||+.++++|++|+....+.++ ....+|.++|||++|+|+++|+++.
T Consensus 1 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~~g~e~~G~v~~vg~~~~ 77 (323)
T cd05276 1 MKAIVIKEPGGP-EVLELG-EVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYP-PPPGASDILGLEVAGVVVAVGPGVT 77 (323)
T ss_pred CeEEEEecCCCc-ccceEE-ecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCC-CCCCCCCcccceeEEEEEeeCCCCC
Confidence 999999998876 777888 8888889999999999999999999998877653 2234678899999999999999999
Q ss_pred CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 021628 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG 159 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~ 159 (310)
.+++||+|++... .|+|++|+.++...++++|+++++.+++.++..+.++++++ +...+.++++|+|+|+
T Consensus 78 ~~~~Gd~V~~~~~---------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~ 148 (323)
T cd05276 78 GWKVGDRVCALLA---------GGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGG 148 (323)
T ss_pred CCCCCCEEEEecC---------CCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 9999999998642 48999999999999999999999999999999999999998 4678999999999998
Q ss_pred CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhh
Q 021628 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKA 231 (310)
Q Consensus 160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~ 231 (310)
.+.+|++++++++.. |++++++++++++.+.+++++.+.+++....+... ..+++|+++++.|. ....+++
T Consensus 149 ~~~ig~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~ 227 (323)
T cd05276 149 ASGVGTAAIQLAKAL-GARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRA 227 (323)
T ss_pred cChHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHHHHHHHHh
Confidence 899999999999996 99999999999999999889988887765433211 12479999999884 4778899
Q ss_pred cccCCEEEEEeCCCCC-----------CceEEEE---ec---------CHHHHHHHHHHHHcCCeeEEecCCcccchhhH
Q 021628 232 VKEGGRVVSIIGSVTP-----------PASSFVL---TS---------DGSILEKLNPYFESGKVKAIIDPKGPFPFSQT 288 (310)
Q Consensus 232 l~~~G~~v~~g~~~~~-----------~~~~~~~---~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (310)
++++|+++.++..... ....+.. .. ....+.++++++.++.+.+. .++.|+++++
T Consensus 228 ~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 305 (323)
T cd05276 228 LAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPV--IDKVFPLEEA 305 (323)
T ss_pred hccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCC--cceEEcHHHH
Confidence 9999999998754210 1111111 00 01235678888888888653 4688999999
Q ss_pred HHHHHHHHcCCCCccEEE
Q 021628 289 LEAFSHLESSRATGKVVI 306 (310)
Q Consensus 289 ~~a~~~~~~~~~~~k~vi 306 (310)
+++++.+.++...+|+++
T Consensus 306 ~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 306 AEAHRRMESNEHIGKIVL 323 (323)
T ss_pred HHHHHHHHhCCCcceEeC
Confidence 999999988877778763
No 101
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.1e-32 Score=246.10 Aligned_cols=296 Identities=26% Similarity=0.347 Sum_probs=228.8
Q ss_pred EEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhC-CCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628 3 AWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLG-AFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (310)
Q Consensus 3 a~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g-~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~ 81 (310)
++++..++. ++++ +.+.|.+.++||+||+.++++|++|++.+.+ ..+.....+|.++|+|++|+|+++|+++++
T Consensus 1 ~~~~~~~~~----~~~~-~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~ 75 (343)
T cd05285 1 AAVLHGPGD----LRLE-ERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTH 75 (343)
T ss_pred CceEecCCc----eeEE-ECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCC
Confidence 356666654 5888 8999999999999999999999999887643 221112245778999999999999999999
Q ss_pred CCCCCeeEeecCc------------cc------c-CCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628 82 FKVGDEVYGDINE------------KA------L-DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (310)
Q Consensus 82 ~~~Gd~V~~~~~~------------~~------~-~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (310)
+++||+|++.+.. .. . ......|+|++|++++.+.++++|+++++++++.+ ..+.+|+++
T Consensus 76 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~ 154 (343)
T cd05285 76 LKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHA 154 (343)
T ss_pred CCCCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHH
Confidence 9999999863110 00 0 00113689999999999999999999999998876 577889998
Q ss_pred HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCcc---c----cc--C
Q 021628 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENI---E----DL--P 212 (310)
Q Consensus 143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~----~~--~ 212 (310)
+..+++++|++|+|.| +|.+|++++++|+.+ |.+ ++++++++++.+.++++|.+.+++.++.+. . .. .
T Consensus 155 ~~~~~~~~g~~vlI~g-~g~vG~~a~~lak~~-G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~ 232 (343)
T cd05285 155 CRRAGVRPGDTVLVFG-AGPIGLLTAAVAKAF-GATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGG 232 (343)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCC
Confidence 8889999999999987 799999999999996 988 888888999999999999999887765442 1 11 2
Q ss_pred CCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC----------ceEEEE-ecCHHHHHHHHHHHHcCCeeEEec
Q 021628 213 EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVL-TSDGSILEKLNPYFESGKVKAIID 278 (310)
Q Consensus 213 ~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 278 (310)
+++|++|||.|. ....+++++++|+++.+|...... .+.+.. ......+..+++++.++.+.+...
T Consensus 233 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 312 (343)
T cd05285 233 KGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYANTYPTAIELLASGKVDVKPL 312 (343)
T ss_pred CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccChHHHHHHHHHHHcCCCCchHh
Confidence 469999999874 478899999999999987433211 111111 112367888999999998753222
Q ss_pred CCcccchhhHHHHHHHHHcCC-CCccEEE
Q 021628 279 PKGPFPFSQTLEAFSHLESSR-ATGKVVI 306 (310)
Q Consensus 279 ~~~~~~~~~~~~a~~~~~~~~-~~~k~vi 306 (310)
..+.|++++++++++.+.++. ..+|++|
T Consensus 313 ~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 313 ITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred EEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 356899999999999998875 4578887
No 102
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=5.5e-32 Score=242.36 Aligned_cols=297 Identities=34% Similarity=0.521 Sum_probs=228.5
Q ss_pred CEEEEEcccCCCccceEEeccccCCC-CCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPS-LREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~-~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~ 79 (310)
+|++++.+++++ ..++.. +.|.|+ +.+++|+||+.++++|++|+..+.+... .....|.++|+|++|+|+++|+++
T Consensus 1 ~~~~~~~~~~~~-~~~~~~-~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~-~~~~~~~~~g~e~~G~V~~vG~~v 77 (352)
T cd08247 1 YKALTFKNNTSP-LTITTI-KLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTF-HFKVKEKGLGRDYSGVIVKVGSNV 77 (352)
T ss_pred CceEEEecCCCc-ceeecc-CCCCCCCCCCCeEEEEEEEEecChHhHHHhccccc-ccccCCCccCceeEEEEEEeCccc
Confidence 589999999987 444444 445554 4999999999999999999987754321 111237789999999999999999
Q ss_pred C-CCCCCCeeEeecCccccCCCCCCCcceeEEEEecC----ccccCCCCCChhhhccccchHHHHHHHHH-hc-ccCCCC
Q 021628 80 K-KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEEN----LLALKPKNLSFVEAASLPLATETAYEGLE-RS-AFSAGK 152 (310)
Q Consensus 80 ~-~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~-~~~~g~ 152 (310)
+ .+++||+|++...+.+ ...|+|++|++++.. .++++|+++++.+++.+++++.|||+++. .. ++++|+
T Consensus 78 ~~~~~~Gd~V~~~~~~~~----~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~ 153 (352)
T cd08247 78 ASEWKVGDEVCGIYPHPY----GGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDS 153 (352)
T ss_pred ccCCCCCCEEEEeecCCC----CCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCC
Confidence 8 8999999998753221 136899999999987 78999999999999999999999999985 45 799999
Q ss_pred EEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCc---c-c----cc--CCCccEEEeC
Q 021628 153 SILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKEN---I-E----DL--PEKFDVVFDA 221 (310)
Q Consensus 153 ~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---~-~----~~--~~~~dvvi~~ 221 (310)
+|+|+|+++.+|++++++|+.+++. .++.+ .++++.+.++++|++.+++.++.+ + . .. .+++|++|||
T Consensus 154 ~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~ 232 (352)
T cd08247 154 KVLVLGGSTSVGRFAIQLAKNHYNIGTVVGT-CSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDC 232 (352)
T ss_pred eEEEECCCchHHHHHHHHHHhcCCcceEEEE-eChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEEC
Confidence 9999998899999999999985344 45555 455556677889998888765433 1 1 11 3589999999
Q ss_pred CCC---hHHHHhhcc---cCCEEEEEeCCC----CC-------------C----ceEE-----E---EecCHHHHHHHHH
Q 021628 222 VGQ---CDKALKAVK---EGGRVVSIIGSV----TP-------------P----ASSF-----V---LTSDGSILEKLNP 266 (310)
Q Consensus 222 ~g~---~~~~~~~l~---~~G~~v~~g~~~----~~-------------~----~~~~-----~---~~~~~~~~~~~~~ 266 (310)
.|. ...++++++ ++|+++.+++.. .. . ...+ . .......+..+++
T Consensus 233 ~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (352)
T cd08247 233 VGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAE 312 (352)
T ss_pred CCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHH
Confidence 874 367889999 999999875321 00 0 0000 0 0011356788999
Q ss_pred HHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628 267 YFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH 307 (310)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~ 307 (310)
++.++.+++. ..+.|++++++++++.+.+++..+|++++
T Consensus 313 ~~~~~~l~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 351 (352)
T cd08247 313 LIADGKVKPP--IDSVYPFEDYKEAFERLKSNRAKGKVVIK 351 (352)
T ss_pred HHhCCCeEee--eccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence 9999998764 46889999999999999998888999886
No 103
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=5.1e-32 Score=239.10 Aligned_cols=298 Identities=34% Similarity=0.543 Sum_probs=242.9
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
||++++..++.+ ..+++. +.|.|.+.+++|+|++.++++|++|+....|.++. ....|.++|||++|+|+++|+++.
T Consensus 1 ~~~~~~~~~~~~-~~~~~~-~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~g~~~~ 77 (325)
T cd08253 1 MRAIRYHEFGAP-DVLRLG-DLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPG-LPPLPYVPGSDGAGVVEAVGEGVD 77 (325)
T ss_pred CceEEEcccCCc-ccceee-ecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCC-CCCCCeecccceEEEEEeeCCCCC
Confidence 899999988765 667888 89999999999999999999999999888776532 235688899999999999999999
Q ss_pred CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hcccCCCCEEEEEcC
Q 021628 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG 159 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g~ 159 (310)
++++||+|++...+.+ ...|++++|+.++...++++|++++..+++.+++++.+||+++. ..++.+|++++|+|+
T Consensus 78 ~~~~Gd~v~~~~~~~~----~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~ 153 (325)
T cd08253 78 GLKVGDRVWLTNLGWG----RRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGG 153 (325)
T ss_pred CCCCCCEEEEeccccC----CCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcC
Confidence 9999999998753211 13689999999999999999999999999999999999999984 588999999999999
Q ss_pred CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhh
Q 021628 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKA 231 (310)
Q Consensus 160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~ 231 (310)
++.+|++++++++.. |++++++++++++.+.+.++|.+.+++.+..+... ..+++|+++++++. ....+++
T Consensus 154 ~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~ 232 (325)
T cd08253 154 SGAVGHAAVQLARWA-GARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDV 232 (325)
T ss_pred CchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHHHHHHHh
Confidence 999999999999996 99999999999999999889988888765543211 13479999999874 4778899
Q ss_pred cccCCEEEEEeCCCC----------CCceEEEEe----cC----HHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHH
Q 021628 232 VKEGGRVVSIIGSVT----------PPASSFVLT----SD----GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFS 293 (310)
Q Consensus 232 l~~~G~~v~~g~~~~----------~~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 293 (310)
++++|+++.++.... .....+... .. ...+..+.+++.++.+++. .++.|++++++++++
T Consensus 233 l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~ 310 (325)
T cd08253 233 LAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPV--IAREYPLEEAAAAHE 310 (325)
T ss_pred hCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEEcHHHHHHHHH
Confidence 999999999975321 111112111 11 2345666778888887653 468899999999999
Q ss_pred HHHcCCCCccEEEEe
Q 021628 294 HLESSRATGKVVIHP 308 (310)
Q Consensus 294 ~~~~~~~~~k~vi~~ 308 (310)
.+.++...+|+++++
T Consensus 311 ~~~~~~~~~kvv~~~ 325 (325)
T cd08253 311 AVESGGAIGKVVLDP 325 (325)
T ss_pred HHHcCCCcceEEEeC
Confidence 999888888988753
No 104
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=7.5e-32 Score=239.36 Aligned_cols=294 Identities=31% Similarity=0.434 Sum_probs=236.1
Q ss_pred EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (310)
Q Consensus 2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~ 81 (310)
|++++.++|.. ++++ +.|.|.+.+++|+|++.++++|++|+....+.++ ...+|.++|||++|+|+.+|+++++
T Consensus 1 ~~~~~~~~~~~---~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~p~~~g~e~~G~v~~~g~~~~~ 74 (330)
T cd08245 1 KAAVVHAAGGP---LEPE-EVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWG--GSKYPLVPGHEIVGEVVEVGAGVEG 74 (330)
T ss_pred CeEEEecCCCC---ceEE-eccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCC--CCCCCcccCccceEEEEEECCCCcc
Confidence 78999988543 6888 8999999999999999999999999999888663 2346788999999999999999999
Q ss_pred CCCCCeeEeec-----Cc--------cc------cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628 82 FKVGDEVYGDI-----NE--------KA------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (310)
Q Consensus 82 ~~~Gd~V~~~~-----~~--------~~------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (310)
+++||+|+... .. .. ..+....|+|++|+.++...++++|+++++.+++.+++.+.+||++
T Consensus 75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~ 154 (330)
T cd08245 75 RKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSA 154 (330)
T ss_pred cccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHH
Confidence 99999997421 00 00 0011236899999999999999999999999999999999999999
Q ss_pred HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc-ccCCCccEEEeC
Q 021628 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE-DLPEKFDVVFDA 221 (310)
Q Consensus 143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~dvvi~~ 221 (310)
+...+++++++|+|+| +|.+|++++++|+.+ |.+++++++++++.+.++++|.+.+++....... ...+++|+++++
T Consensus 155 l~~~~~~~~~~vlI~g-~g~iG~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~vi~~ 232 (330)
T cd08245 155 LRDAGPRPGERVAVLG-IGGLGHLAVQYARAM-GFETVAITRSPDKRELARKLGADEVVDSGAELDEQAAAGGADVILVT 232 (330)
T ss_pred HHhhCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHhccCCCCEEEEC
Confidence 9668899999999997 677999999999996 9999999999999999998998887765443221 123479999999
Q ss_pred CCC---hHHHHhhcccCCEEEEEeCCCCCC----ceEE-------E--EecCHHHHHHHHHHHHcCCeeEEecCCcccch
Q 021628 222 VGQ---CDKALKAVKEGGRVVSIIGSVTPP----ASSF-------V--LTSDGSILEKLNPYFESGKVKAIIDPKGPFPF 285 (310)
Q Consensus 222 ~g~---~~~~~~~l~~~G~~v~~g~~~~~~----~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (310)
+++ ...++++++++|+++.++...... ...+ . .......++.+++++.++.+.+. .+.|++
T Consensus 233 ~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~---~~~~~~ 309 (330)
T cd08245 233 VVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVKPM---IETFPL 309 (330)
T ss_pred CCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCcce---EEEEcH
Confidence 763 478899999999999997542110 0001 0 01134678889999999988752 367999
Q ss_pred hhHHHHHHHHHcCCCCccEEE
Q 021628 286 SQTLEAFSHLESSRATGKVVI 306 (310)
Q Consensus 286 ~~~~~a~~~~~~~~~~~k~vi 306 (310)
++++++++.+.++...+|+++
T Consensus 310 ~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 310 DQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHHHHHHHcCCCCcceeC
Confidence 999999999999888888764
No 105
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=1.8e-31 Score=235.02 Aligned_cols=290 Identities=34% Similarity=0.447 Sum_probs=238.7
Q ss_pred EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (310)
Q Consensus 2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~ 81 (310)
||+.+...+.. ..+.+. +.+.+++.++||+|++.++++|++|+....+.++ ..+|.++|||++|+|+.+|+++.+
T Consensus 1 ~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~---~~~~~~~g~e~~G~v~~~g~~~~~ 75 (320)
T cd05286 1 KAVRIHKTGGP-EVLEYE-DVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYP---LPLPFVLGVEGAGVVEAVGPGVTG 75 (320)
T ss_pred CeEEEecCCCc-cceEEe-ecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCC---CCCCccCCcceeEEEEEECCCCCC
Confidence 57788777776 667887 7777788999999999999999999998887653 245778999999999999999999
Q ss_pred CCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCC
Q 021628 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGA 160 (310)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~ 160 (310)
+++||+|+++. ..|++++|+.++.+.++++|++++..+++.+++...++++++ +..++.+|++|+|+|++
T Consensus 76 ~~~G~~V~~~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~ 146 (320)
T cd05286 76 FKVGDRVAYAG---------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAA 146 (320)
T ss_pred CCCCCEEEEec---------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence 99999999863 148999999999999999999999999999999999999998 46889999999999999
Q ss_pred cchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhhc
Q 021628 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKAV 232 (310)
Q Consensus 161 g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~l 232 (310)
|.+|++++++++.+ |++++++++++++.+.++++|.+++++....++.. ..+++|++++|.+. ...+++++
T Consensus 147 g~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l 225 (320)
T cd05286 147 GGVGLLLTQWAKAL-GATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSL 225 (320)
T ss_pred chHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhh
Confidence 99999999999996 99999999999999999999998888765433211 13479999999874 57889999
Q ss_pred ccCCEEEEEeCCCC-----------CCceEEEEe------cC----HHHHHHHHHHHHcCCeeEEecCCcccchhhHHHH
Q 021628 233 KEGGRVVSIIGSVT-----------PPASSFVLT------SD----GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEA 291 (310)
Q Consensus 233 ~~~G~~v~~g~~~~-----------~~~~~~~~~------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 291 (310)
+++|+++.+|.... .....+... .. ...+.++++++.++.+.+. .++.|++++++++
T Consensus 226 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a 303 (320)
T cd05286 226 RPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQA 303 (320)
T ss_pred ccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHH
Confidence 99999999975431 112222110 11 1335678889999988764 4678999999999
Q ss_pred HHHHHcCCCCccEEEEe
Q 021628 292 FSHLESSRATGKVVIHP 308 (310)
Q Consensus 292 ~~~~~~~~~~~k~vi~~ 308 (310)
++.+.++...+|+++++
T Consensus 304 ~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 304 HRDLESRKTTGKLLLIP 320 (320)
T ss_pred HHHHHcCCCCceEEEeC
Confidence 99999888888888753
No 106
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.9e-31 Score=234.72 Aligned_cols=294 Identities=37% Similarity=0.557 Sum_probs=237.3
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
|||+++.+++.. +.++++ +.|.|++.+++|+||+.++++|++|+....+... ...+|.++|||++|+|+.+|++++
T Consensus 1 ~~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~~~ 76 (325)
T cd08271 1 MKAWVLPKPGAA-LQLTLE-EIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPP--AWSYPHVPGVDGAGVVVAVGAKVT 76 (325)
T ss_pred CeeEEEccCCCc-ceeEEe-ccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC--CCCCCcccccceEEEEEEeCCCCC
Confidence 999999999942 347999 8999999999999999999999999988877542 123467899999999999999999
Q ss_pred CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 021628 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG 159 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~ 159 (310)
.+++||+|++... ....|+|++|+.++...++++|++++..+++.+++.+.++++++ +.+.+++|++++|+|+
T Consensus 77 ~~~~Gd~V~~~~~------~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~ 150 (325)
T cd08271 77 GWKVGDRVAYHAS------LARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGG 150 (325)
T ss_pred cCCCCCEEEeccC------CCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECC
Confidence 9999999998641 01258999999999999999999999999999999999999998 5688999999999998
Q ss_pred CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhh
Q 021628 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKA 231 (310)
Q Consensus 160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~ 231 (310)
.+.+|++++++++.. |++++++. ++++.+.+.++|.+.+++....+... ..+++|++++++++ ....+++
T Consensus 151 ~~~ig~~~~~~a~~~-g~~v~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~ 228 (325)
T cd08271 151 AGGVGSFAVQLAKRA-GLRVITTC-SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPT 228 (325)
T ss_pred ccHHHHHHHHHHHHc-CCEEEEEE-cHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHh
Confidence 899999999999996 99988877 66778888889988887765433221 13479999999874 4678999
Q ss_pred cccCCEEEEEeCCCCC-------CceEEE---Ee------------cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHH
Q 021628 232 VKEGGRVVSIIGSVTP-------PASSFV---LT------------SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTL 289 (310)
Q Consensus 232 l~~~G~~v~~g~~~~~-------~~~~~~---~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (310)
++++|+++.++..... ....+. .. ...+.+.++++++.++.+.+. .++.|+++++.
T Consensus 229 l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~ 306 (325)
T cd08271 229 LAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPL--VIEVLPFEQLP 306 (325)
T ss_pred hccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeec--cceEEcHHHHH
Confidence 9999999988643211 111111 00 011345678899999998764 46889999999
Q ss_pred HHHHHHHcCCCCccEEEEe
Q 021628 290 EAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 290 ~a~~~~~~~~~~~k~vi~~ 308 (310)
++++.+.++...+|+++++
T Consensus 307 ~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 307 EALRALKDRHTRGKIVVTI 325 (325)
T ss_pred HHHHHHHcCCccceEEEEC
Confidence 9999999888888988753
No 107
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=7e-32 Score=244.19 Aligned_cols=286 Identities=29% Similarity=0.383 Sum_probs=220.2
Q ss_pred eEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCC-----CCCCCCCcccccceeEEEEEeCCCCCCCCCCCeeEe
Q 021628 16 LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFS-----ATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYG 90 (310)
Q Consensus 16 l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~-----~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~ 90 (310)
++++ +.|.|+++++||+||+.++++|++|++.+.+... .....+|.++|||++|+|+++|++++.+++||+|++
T Consensus 39 ~~~~-~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 117 (384)
T cd08265 39 LRVE-DVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTA 117 (384)
T ss_pred EEEE-ECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEE
Confidence 6889 8999999999999999999999999988863210 012356789999999999999999999999999986
Q ss_pred ecCccc------------------cCCCCCCCcceeEEEEecCccccCCCC-------CChhhhccccchHHHHHHHH-H
Q 021628 91 DINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKN-------LSFVEAASLPLATETAYEGL-E 144 (310)
Q Consensus 91 ~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~-------~~~~~aa~~~~~~~ta~~al-~ 144 (310)
.+.... ..+....|+|++|+.++...++++|++ ++.+ +++++..+++||+++ .
T Consensus 118 ~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~ 196 (384)
T cd08265 118 EEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFI 196 (384)
T ss_pred CCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHh
Confidence 321100 001123689999999999999999986 3444 556677888999998 4
Q ss_pred h-cccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCC---cccc----c--CC
Q 021628 145 R-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKE---NIED----L--PE 213 (310)
Q Consensus 145 ~-~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~----~--~~ 213 (310)
. .++++|++|+|+| +|.+|++++++|+.+ |+ +++++++++++.+.++++|++++++.++. ++.. . .+
T Consensus 197 ~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~-G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~ 274 (384)
T cd08265 197 RGGGFRPGAYVVVYG-AGPIGLAAIALAKAA-GASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGW 274 (384)
T ss_pred hcCCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCC
Confidence 4 7899999999997 799999999999996 88 68888888889999999999888876532 2211 1 24
Q ss_pred CccEEEeCCCC----hHHHHhhcccCCEEEEEeCCCCCC----------ceEEEE---ecCHHHHHHHHHHHHcCCeeEE
Q 021628 214 KFDVVFDAVGQ----CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVL---TSDGSILEKLNPYFESGKVKAI 276 (310)
Q Consensus 214 ~~dvvi~~~g~----~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 276 (310)
++|+|+|+.|. ...++++|+++|+++.+|...... ...+.. ......+.++++++.++.+++.
T Consensus 275 gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~l~~~ 354 (384)
T cd08265 275 GADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMASGKIDMT 354 (384)
T ss_pred CCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHHHHHHHHHcCCCChH
Confidence 79999999884 378899999999999997542111 001111 0123468899999999998764
Q ss_pred ecCCcccchhhHHHHHHHHHcCCCCccEEE
Q 021628 277 IDPKGPFPFSQTLEAFSHLESSRATGKVVI 306 (310)
Q Consensus 277 ~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi 306 (310)
...++.|+++++++|++.+.++ ..+|+++
T Consensus 355 ~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 355 KIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred HheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 3356789999999999997654 5677765
No 108
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=1.7e-31 Score=240.26 Aligned_cols=298 Identities=25% Similarity=0.304 Sum_probs=222.5
Q ss_pred EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCC-CCCCCCcccccceeEEEEEeCCCCC
Q 021628 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-TDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
+++++..+.. ++++ +.+.|++.++||+||+.++++|++|++.+.+.... ....+|.++|||++|+|+++|++++
T Consensus 19 ~~~~~~~~~~----l~~~-~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 93 (364)
T PLN02702 19 MAAWLVGVNT----LKIQ-PFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVK 93 (364)
T ss_pred ceEEEecCCc----eEEE-eccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCC
Confidence 4444554443 5888 88888899999999999999999999988763211 1123577899999999999999999
Q ss_pred CCCCCCeeEeecCccc-------------------cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628 81 KFKVGDEVYGDINEKA-------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~-------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 141 (310)
.+++||+|++.+.-.. .......|+|++|+.++...++++|+++++.+++.. ..+.++++
T Consensus 94 ~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~ 172 (364)
T PLN02702 94 HLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVH 172 (364)
T ss_pred CCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHH
Confidence 9999999987421100 000112689999999999999999999999888763 23344788
Q ss_pred HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCC--CCcccc--------
Q 021628 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYT--KENIED-------- 210 (310)
Q Consensus 142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~-------- 210 (310)
++...++.+|++|+|+| +|++|++++++|+.+ |++ ++++++++++.+.++++|++.+++.. ..++..
T Consensus 173 ~~~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 250 (364)
T PLN02702 173 ACRRANIGPETNVLVMG-AGPIGLVTMLAARAF-GAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKA 250 (364)
T ss_pred HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhh
Confidence 88778889999999997 799999999999996 986 55666788889988999998876543 222211
Q ss_pred cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCC----------CceEEEE-ecCHHHHHHHHHHHHcCCeeEE
Q 021628 211 LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP----------PASSFVL-TSDGSILEKLNPYFESGKVKAI 276 (310)
Q Consensus 211 ~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~----------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 276 (310)
..+++|++||+.|. ...++++++++|+++.+|..... ....... ......+..+++++.++.+.+.
T Consensus 251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~ 330 (364)
T PLN02702 251 MGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRYRNTWPLCLEFLRSGKIDVK 330 (364)
T ss_pred cCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccChHHHHHHHHHHHcCCCCch
Confidence 12479999999873 58999999999999999853211 0111111 1123567889999999988643
Q ss_pred ecCCcccc--hhhHHHHHHHHHcCCCCccEEEE
Q 021628 277 IDPKGPFP--FSQTLEAFSHLESSRATGKVVIH 307 (310)
Q Consensus 277 ~~~~~~~~--~~~~~~a~~~~~~~~~~~k~vi~ 307 (310)
..+.+.|+ ++++++|++.+.+++..+|+++.
T Consensus 331 ~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 331 PLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred HheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 22456644 58999999999888877898874
No 109
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=9.3e-32 Score=236.76 Aligned_cols=277 Identities=27% Similarity=0.290 Sum_probs=220.8
Q ss_pred ceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHH-hCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCeeEeecC
Q 021628 15 VLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRM-LGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDIN 93 (310)
Q Consensus 15 ~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~-~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~ 93 (310)
.++++ +++.|++.++||+||+.++++|++|+..+ .|..+...+..|.++|+|++|+|+.+|++++++++||+|++..
T Consensus 6 ~~~~~-~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~- 83 (312)
T cd08269 6 RFEVE-EHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS- 83 (312)
T ss_pred eeEEE-ECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec-
Confidence 36888 89999999999999999999999999887 6654222223478899999999999999999999999999864
Q ss_pred ccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHh
Q 021628 94 EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKH 173 (310)
Q Consensus 94 ~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~ 173 (310)
.|+|++|++++.+.++++|+++. .++....++.++++++...+++++++|+|+| +|.+|.+++++|+.
T Consensus 84 ---------~g~~~~~~~v~~~~~~~lP~~~~--~~~~~~~~~~~a~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~la~~ 151 (312)
T cd08269 84 ---------GGAFAEYDLADADHAVPLPSLLD--GQAFPGEPLGCALNVFRRGWIRAGKTVAVIG-AGFIGLLFLQLAAA 151 (312)
T ss_pred ---------CCcceeeEEEchhheEECCCchh--hhHHhhhhHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHH
Confidence 48999999999999999999982 2222236778899988888899999999997 79999999999999
Q ss_pred hcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeC
Q 021628 174 VFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIG 243 (310)
Q Consensus 174 ~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~ 243 (310)
+ |++ ++++.+++++.+.++++|++.+++.+...+.. ...++|+++||.|. ...++++++++|+++.+|.
T Consensus 152 ~-g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~ 230 (312)
T cd08269 152 A-GARRVIAIDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGY 230 (312)
T ss_pred c-CCcEEEEECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEcc
Confidence 6 998 88888898899988999998887754433211 12479999999863 4788999999999999975
Q ss_pred CCC-CC----------ceEEEEe------cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCC-CccEE
Q 021628 244 SVT-PP----------ASSFVLT------SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRA-TGKVV 305 (310)
Q Consensus 244 ~~~-~~----------~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~k~v 305 (310)
... +. ...+... ...+.++++++++.++.+.+.....+.|++++++++++.+.+++. .+|.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 310 (312)
T cd08269 231 HQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGV 310 (312)
T ss_pred CCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEE
Confidence 421 10 1111111 113678899999999998864334578999999999999988864 56877
Q ss_pred E
Q 021628 306 I 306 (310)
Q Consensus 306 i 306 (310)
+
T Consensus 311 ~ 311 (312)
T cd08269 311 I 311 (312)
T ss_pred e
Confidence 5
No 110
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=1.1e-30 Score=230.57 Aligned_cols=292 Identities=34% Similarity=0.510 Sum_probs=238.4
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
||++.+.+.+.+ ..++++ +.+.+.+++++|+||+.++++|++|+....+.++. +..+|.++|||++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~~-~~~~~~-~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~vg~~~~ 77 (325)
T TIGR02824 1 MKAIEITEPGGP-EVLVLV-EVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPP-PPGASDILGLEVAGEVVAVGEGVS 77 (325)
T ss_pred CceEEEccCCCc-ccceEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCCCCccceeEEEEEEeCCCCC
Confidence 899999988877 677887 77777789999999999999999999988776532 234578899999999999999999
Q ss_pred CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 021628 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG 159 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~ 159 (310)
++++||+|++... .|++++|+.++...++++|+++++..++.+++++.++++++ +...++++++++|+|+
T Consensus 78 ~~~~Gd~V~~~~~---------~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~ 148 (325)
T TIGR02824 78 RWKVGDRVCALVA---------GGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGG 148 (325)
T ss_pred CCCCCCEEEEccC---------CCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 9999999998642 48999999999999999999999999999999999999987 6789999999999999
Q ss_pred CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhh
Q 021628 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKA 231 (310)
Q Consensus 160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~ 231 (310)
++.+|++++++++.. |++++++.+++++.+.++++|.+.+++....++.. ..+++|++++++|. ....+++
T Consensus 149 ~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~ 227 (325)
T TIGR02824 149 ASGIGTTAIQLAKAF-GARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKA 227 (325)
T ss_pred cchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchHHHHHHHHh
Confidence 999999999999996 99999999999998888889887776654332211 12479999999874 4788999
Q ss_pred cccCCEEEEEeCCCC-----------CCceEEEEe---c--C-------HHHHHHHHHHHHcCCeeEEecCCcccchhhH
Q 021628 232 VKEGGRVVSIIGSVT-----------PPASSFVLT---S--D-------GSILEKLNPYFESGKVKAIIDPKGPFPFSQT 288 (310)
Q Consensus 232 l~~~G~~v~~g~~~~-----------~~~~~~~~~---~--~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (310)
++++|+++.++.... ..+..+... . . ...+.+++++++++.+.+. .++.|+++++
T Consensus 228 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~ 305 (325)
T TIGR02824 228 LALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPV--IDKVFPLEDA 305 (325)
T ss_pred hccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCc--cccEEeHHHH
Confidence 999999999975421 111111110 1 0 1234667888988888653 4688999999
Q ss_pred HHHHHHHHcCCCCccEEEE
Q 021628 289 LEAFSHLESSRATGKVVIH 307 (310)
Q Consensus 289 ~~a~~~~~~~~~~~k~vi~ 307 (310)
+++++.+.++...+|++++
T Consensus 306 ~~~~~~~~~~~~~~~~v~~ 324 (325)
T TIGR02824 306 AQAHALMESGDHIGKIVLT 324 (325)
T ss_pred HHHHHHHHhCCCcceEEEe
Confidence 9999999888888888875
No 111
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=8.9e-31 Score=232.31 Aligned_cols=287 Identities=28% Similarity=0.333 Sum_probs=227.0
Q ss_pred EEEEEcccCC---CccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCC-CCCCCCcccccceeEEEEEeCC
Q 021628 2 KAWVYKEYGN---SQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-TDSPLPTIPGYDVAGVVEKVGS 77 (310)
Q Consensus 2 ka~~~~~~g~---~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~~g~ 77 (310)
|+|++++.++ ..+.++++ +.|.|++.+++|+||+.++++|+.|.....+.... .+...+.++|+|++|+|+++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~ 81 (329)
T cd05288 3 RQVVLAKRPEGPPPPDDFELV-EVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS 81 (329)
T ss_pred cEEEEeccCCCCCCccceeEE-eccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence 6888887763 22778999 89999999999999999999999887655543210 1122356789999999999996
Q ss_pred CCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEec-CccccCCCCCC--hhhhcc-ccchHHHHHHHH-HhcccCCCC
Q 021628 78 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEE-NLLALKPKNLS--FVEAAS-LPLATETAYEGL-ERSAFSAGK 152 (310)
Q Consensus 78 ~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~ip~~~~--~~~aa~-~~~~~~ta~~al-~~~~~~~g~ 152 (310)
+ ++++||+|+++ ++|++|+.++. ..++++|++++ ...++. +++++.+||+++ ....+.+++
T Consensus 82 ~--~~~~Gd~V~~~------------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~ 147 (329)
T cd05288 82 P--DFKVGDLVSGF------------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGE 147 (329)
T ss_pred C--CCCCCCEEecc------------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCC
Confidence 4 79999999884 58999999999 99999999985 445555 888999999998 467889999
Q ss_pred EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-cCCCEEeeCCCCcccc-----cCCCccEEEeCCCC--
Q 021628 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIED-----LPEKFDVVFDAVGQ-- 224 (310)
Q Consensus 153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~-----~~~~~dvvi~~~g~-- 224 (310)
+|+|+|++|.+|++++++|+.. |++++++++++++.+.+++ +|++.+++.++.++.. ..+++|++|||+|.
T Consensus 148 ~vlI~g~~g~ig~~~~~~a~~~-G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~d~vi~~~g~~~ 226 (329)
T cd05288 148 TVVVSAAAGAVGSVVGQIAKLL-GARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGGEI 226 (329)
T ss_pred EEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhccCCceEEEEcchHHH
Confidence 9999999999999999999996 9999999999999999987 9998888876543211 13579999999984
Q ss_pred hHHHHhhcccCCEEEEEeCCCCCC----------------ceEEEEe---cC----HHHHHHHHHHHHcCCeeEEecCCc
Q 021628 225 CDKALKAVKEGGRVVSIIGSVTPP----------------ASSFVLT---SD----GSILEKLNPYFESGKVKAIIDPKG 281 (310)
Q Consensus 225 ~~~~~~~l~~~G~~v~~g~~~~~~----------------~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~ 281 (310)
...++++++++|+++.+|...... ...+... .. .+.+.++++++.++.+++.. ..
T Consensus 227 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~--~~ 304 (329)
T cd05288 227 LDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRE--DV 304 (329)
T ss_pred HHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccc--cc
Confidence 578899999999999997542110 1111111 11 24577888999999988652 45
Q ss_pred ccchhhHHHHHHHHHcCCCCccEEE
Q 021628 282 PFPFSQTLEAFSHLESSRATGKVVI 306 (310)
Q Consensus 282 ~~~~~~~~~a~~~~~~~~~~~k~vi 306 (310)
.+++++++++++.+.+++..+|+++
T Consensus 305 ~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 305 VEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred cccHHHHHHHHHHHhcCCCccceeC
Confidence 6899999999999988887778764
No 112
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.1e-30 Score=230.53 Aligned_cols=290 Identities=43% Similarity=0.666 Sum_probs=229.5
Q ss_pred EEcccCCCccce--EEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCC-CCCCCcccccceeEEEEEeCCCCCC
Q 021628 5 VYKEYGNSQSVL--KFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSAT-DSPLPTIPGYDVAGVVEKVGSQVKK 81 (310)
Q Consensus 5 ~~~~~g~~~~~l--~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~~g~~~~~ 81 (310)
+|...+++ +++ +++ +.+.|++.++||+|++.++++|++|++.+.|.++.. ...+|..+|||++|+|+++|+++.+
T Consensus 2 ~~~~~~~~-~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 79 (319)
T cd08267 2 VYTRYGSP-EVLLLLEV-EVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTR 79 (319)
T ss_pred eeCCCCCh-hhhhhccc-cCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCC
Confidence 45556665 444 778 889999999999999999999999999887754210 1234678999999999999999999
Q ss_pred CCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hcccCCCCEEEEEcCC
Q 021628 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGGA 160 (310)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g~~ 160 (310)
+.+||+|++.... ...|+|++|..++.+.++++|++++..+++.+++.+.+||+++. ..++++|++|+|+|++
T Consensus 80 ~~~Gd~V~~~~~~------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~ 153 (319)
T cd08267 80 FKVGDEVFGRLPP------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGAS 153 (319)
T ss_pred CCCCCEEEEeccC------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence 9999999986420 12489999999999999999999999999999999999999984 5679999999999988
Q ss_pred cchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcc---cccCCCccEEEeCCCC----hHHHHhhcc
Q 021628 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI---EDLPEKFDVVFDAVGQ----CDKALKAVK 233 (310)
Q Consensus 161 g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~dvvi~~~g~----~~~~~~~l~ 233 (310)
|.+|++++++|+.+ |+++++++++ ++.+.++++|.+++++.+..++ ....+++|++++|+|. ....+..++
T Consensus 154 g~~g~~~~~la~~~-g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~ 231 (319)
T cd08267 154 GGVGTFAVQIAKAL-GAHVTGVCST-RNAELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALK 231 (319)
T ss_pred cHHHHHHHHHHHHc-CCEEEEEeCH-HHHHHHHHcCCCEeecCCCCCcchhccCCCCCcEEEECCCchHHHHHHhhhccC
Confidence 99999999999996 9999888865 7888888999888877654333 1223479999999873 233444599
Q ss_pred cCCEEEEEeCCCCCC--c------------eEE---EEecCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHH
Q 021628 234 EGGRVVSIIGSVTPP--A------------SSF---VLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLE 296 (310)
Q Consensus 234 ~~G~~v~~g~~~~~~--~------------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 296 (310)
++|+++.+|...... . ..+ ......+.+.++++++.++.+.+. +++.|++++++++++.+.
T Consensus 232 ~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~i~~a~~~~~ 309 (319)
T cd08267 232 PGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKPV--IDSVYPLEDAPEAYRRLK 309 (319)
T ss_pred CCCEEEEeccccccccccccccchhhccccceEEEEEecCCHHHHHHHHHHHHCCCeeee--eeeEEcHHHHHHHHHHHh
Confidence 999999997543110 0 000 111126778999999999998764 468899999999999998
Q ss_pred cCCCCccEEE
Q 021628 297 SSRATGKVVI 306 (310)
Q Consensus 297 ~~~~~~k~vi 306 (310)
++...+|+++
T Consensus 310 ~~~~~~~vvv 319 (319)
T cd08267 310 SGRARGKVVI 319 (319)
T ss_pred cCCCCCcEeC
Confidence 8877777763
No 113
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=3.9e-31 Score=235.75 Aligned_cols=293 Identities=26% Similarity=0.316 Sum_probs=223.8
Q ss_pred cccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCC-CCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 021628 7 KEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF-SATDSPLPTIPGYDVAGVVEKVGSQVKKFKVG 85 (310)
Q Consensus 7 ~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~G 85 (310)
+++|.. ++++ +.|.|+++++||+||+.++++|++|...+.+.. ......+|.++|+|++|+|+++|++++++++|
T Consensus 5 ~~~~~~---~~l~-~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 80 (340)
T TIGR00692 5 TKPGYG---AELT-EVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVG 80 (340)
T ss_pred ccCCCC---cEEE-ECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCC
Confidence 455555 7888 899999999999999999999999998765531 11122456789999999999999999999999
Q ss_pred CeeEeecCccc------------------cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcc
Q 021628 86 DEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA 147 (310)
Q Consensus 86 d~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~ 147 (310)
|+|++...... ..+....|+|++|++++.+.++++|++++...+ +++..+.++++++ ...
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~-~~~ 158 (340)
T TIGR00692 81 DYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV-LAG 158 (340)
T ss_pred CEEEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH-Hcc
Confidence 99987421100 001124689999999999999999999998554 5677888888876 445
Q ss_pred cCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEe
Q 021628 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFD 220 (310)
Q Consensus 148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~ 220 (310)
.++|++|+|.| +|.+|.+++++|+.+ |.+ ++++.+++++.+.++++|.+.+++....++.. ..+++|+++|
T Consensus 159 ~~~g~~vlI~~-~g~vg~~a~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld 236 (340)
T TIGR00692 159 PISGKSVLVTG-AGPIGLMAIAVAKAS-GAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLE 236 (340)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEE
Confidence 67999999987 799999999999996 987 77777788899988999998888765443211 1357999999
Q ss_pred CCCC---hHHHHhhcccCCEEEEEeCCCCCC-----------ceEEEE---ecCHHHHHHHHHHHHcCCeeEEecCCccc
Q 021628 221 AVGQ---CDKALKAVKEGGRVVSIIGSVTPP-----------ASSFVL---TSDGSILEKLNPYFESGKVKAIIDPKGPF 283 (310)
Q Consensus 221 ~~g~---~~~~~~~l~~~G~~v~~g~~~~~~-----------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (310)
+.|. ....+++|+++|+++.+|...... .+.+.. ....+.+.++++++.++.+++...+.+.+
T Consensus 237 ~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 316 (340)
T TIGR00692 237 MSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKF 316 (340)
T ss_pred CCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeee
Confidence 9773 478899999999999998542100 011111 11234577899999999987422246889
Q ss_pred chhhHHHHHHHHHcCCCCccEEEEe
Q 021628 284 PFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 284 ~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
++++++++++.+.++.. ||+++++
T Consensus 317 ~l~~~~~a~~~~~~~~~-gkvvv~~ 340 (340)
T TIGR00692 317 KFDKFEKGFELMRSGQT-GKVILSL 340 (340)
T ss_pred eHHHHHHHHHHHhcCCC-ceEEEeC
Confidence 99999999999988774 8999864
No 114
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.8e-30 Score=229.66 Aligned_cols=297 Identities=35% Similarity=0.481 Sum_probs=238.7
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
||++++...+.+ +.++++ +.+.|.+.+++|+|++.++++|++|+....+.++.. ..+|..+|||++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~~~ 77 (328)
T cd08268 1 MRAVRFHQFGGP-EVLRIE-ELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP-PPLPARLGYEAAGVVEAVGAGVT 77 (328)
T ss_pred CeEEEEeccCCc-ceeEEe-ecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC-CCCCCCCCcceEEEEEeeCCCCC
Confidence 899999987776 678888 788888999999999999999999998887765422 34577899999999999999999
Q ss_pred CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 021628 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG 159 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~ 159 (310)
.+++||+|+++... .....|++++|+.++.+.++++|++++..+++.+++.+.++|+++ ....+.++++++|+|+
T Consensus 78 ~~~~Gd~V~~~~~~----~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~ 153 (328)
T cd08268 78 GFAVGDRVSVIPAA----DLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAA 153 (328)
T ss_pred cCCCCCEEEecccc----ccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecC
Confidence 99999999986421 112358999999999999999999999999999999999999998 4688899999999998
Q ss_pred CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc----c--CCCccEEEeCCCC--hHHHHhh
Q 021628 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALKA 231 (310)
Q Consensus 160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~dvvi~~~g~--~~~~~~~ 231 (310)
++.+|++++++++.. |++++.+++++++.+.++++|.+.+++.+...... . ..++|+++++.+. ...++++
T Consensus 154 ~~~~g~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~ 232 (328)
T cd08268 154 SSSVGLAAIQIANAA-GATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADA 232 (328)
T ss_pred ccHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchHhHHHHHHh
Confidence 899999999999996 99999999999999988888888777765433211 1 2379999999874 4788999
Q ss_pred cccCCEEEEEeCCCC-----------CCceEEEEe------cCH----HHHHHHHHHHHcCCeeEEecCCcccchhhHHH
Q 021628 232 VKEGGRVVSIIGSVT-----------PPASSFVLT------SDG----SILEKLNPYFESGKVKAIIDPKGPFPFSQTLE 290 (310)
Q Consensus 232 l~~~G~~v~~g~~~~-----------~~~~~~~~~------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (310)
++++|+++.+|.... ..+..+... ... ..+..+.+++.++.+.+. .+..|+++++++
T Consensus 233 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 310 (328)
T cd08268 233 LAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPV--VDRVFPFDDIVE 310 (328)
T ss_pred hccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCC--cccEEcHHHHHH
Confidence 999999999875321 111111111 012 234555666777777653 467899999999
Q ss_pred HHHHHHcCCCCccEEEE
Q 021628 291 AFSHLESSRATGKVVIH 307 (310)
Q Consensus 291 a~~~~~~~~~~~k~vi~ 307 (310)
+++.+.++...+|++++
T Consensus 311 ~~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 311 AHRYLESGQQIGKIVVT 327 (328)
T ss_pred HHHHHHcCCCCceEEEe
Confidence 99999888888888875
No 115
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=4.2e-31 Score=218.71 Aligned_cols=276 Identities=29% Similarity=0.367 Sum_probs=221.4
Q ss_pred cceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCC-CCCcccccceeEEEEEeC--CCCCCCCCCCeeEe
Q 021628 14 SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDS-PLPTIPGYDVAGVVEKVG--SQVKKFKVGDEVYG 90 (310)
Q Consensus 14 ~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~-~~p~~~G~e~~G~V~~~g--~~~~~~~~Gd~V~~ 90 (310)
+.++++ +.+.|+|++|||++|+.|.++++. ++|.+...+. ..|+-+|-..+|.++... +..++|++||.|..
T Consensus 25 d~F~le-e~~vp~p~~GqvLl~~~ylS~DPy----mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~ 99 (340)
T COG2130 25 DDFRLE-EVDVPEPGEGQVLLRTLYLSLDPY----MRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVG 99 (340)
T ss_pred CCceeE-eccCCCCCcCceEEEEEEeccCHH----HeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEe
Confidence 468999 899999999999999999999984 4555543322 235667766655444432 55678999999998
Q ss_pred ecCccccCCCCCCCcceeEEEEecCccccCCCCCChh--hhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHH
Q 021628 91 DINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFV--EAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMV 167 (310)
Q Consensus 91 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~--~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a 167 (310)
. .+|++|..++.+.+.++++..-+. ....+.++..|||.+| ..+.+++|++|+|.+|+|++|..+
T Consensus 100 ~------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvv 167 (340)
T COG2130 100 V------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVV 167 (340)
T ss_pred c------------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHH
Confidence 5 589999999999999988643222 2334466788999999 689999999999999999999999
Q ss_pred HHHHHhhcCCcEEEEecChhhHHHHHH-cCCCEEeeCCCCcccc-----cCCCccEEEeCCCC--hHHHHhhcccCCEEE
Q 021628 168 IQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIED-----LPEKFDVVFDAVGQ--CDKALKAVKEGGRVV 239 (310)
Q Consensus 168 ~~la~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~-----~~~~~dvvi~~~g~--~~~~~~~l~~~G~~v 239 (310)
.|+||.. |++|+.+..++||.+++++ +|.|..+|++.+++.+ .++|.|+.||++|. +...+..|...+|++
T Consensus 168 gQiAKlk-G~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfeNVGg~v~DAv~~~ln~~aRi~ 246 (340)
T COG2130 168 GQIAKLK-GCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFARIP 246 (340)
T ss_pred HHHHHhh-CCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEEcCCchHHHHHHHhhcccccee
Confidence 9999985 9999999999999999976 9999999999888754 36799999999984 688999999999999
Q ss_pred EEeCCC------CC---CceE-----------EEEecC-----HHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHH
Q 021628 240 SIIGSV------TP---PASS-----------FVLTSD-----GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSH 294 (310)
Q Consensus 240 ~~g~~~------~~---~~~~-----------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 294 (310)
.+|... .+ ..+. |....+ .+.++++.+++++|+++... +-.-.++++++||..
T Consensus 247 ~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~g 324 (340)
T COG2130 247 VCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIG 324 (340)
T ss_pred eeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHH
Confidence 998542 11 1111 122111 35678899999999999975 456689999999999
Q ss_pred HHcCCCCccEEEEeC
Q 021628 295 LESSRATGKVVIHPI 309 (310)
Q Consensus 295 ~~~~~~~~k~vi~~~ 309 (310)
+.+++.+||.++++.
T Consensus 325 Ll~G~N~GK~vvKv~ 339 (340)
T COG2130 325 LLSGKNFGKLVVKVA 339 (340)
T ss_pred HhcCCccceEEEEec
Confidence 999999999999875
No 116
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=1.1e-30 Score=228.46 Aligned_cols=272 Identities=33% Similarity=0.509 Sum_probs=224.6
Q ss_pred CCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCeeEeecCccccCCCCCC
Q 021628 24 VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRN 103 (310)
Q Consensus 24 ~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~ 103 (310)
.|++.+++|+||+.++++|++|+..+.+.++. ...+|.++|+|++|+|+++|++++++++||+|++... ...
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-------~~~ 73 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPT-MPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG-------ESM 73 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCC-CCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC-------CCC
Confidence 46789999999999999999999999887542 2356889999999999999999999999999998642 235
Q ss_pred CcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEe
Q 021628 104 GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT 183 (310)
Q Consensus 104 g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~ 183 (310)
|+|++|++++.+.++++|++++..+++.+++.+.+||++++...+++|++|+|+++++.+|++++++++.+ |+++++++
T Consensus 74 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~-g~~v~~~~ 152 (303)
T cd08251 74 GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLARLK-GAEIYATA 152 (303)
T ss_pred cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEc
Confidence 89999999999999999999999999999999999999998889999999999999999999999999996 99999999
Q ss_pred cChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhhcccCCEEEEEeCCCCC--C-----
Q 021628 184 SSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP--P----- 248 (310)
Q Consensus 184 ~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~~~~--~----- 248 (310)
+++++.+.++++|.+.+++....++.. ..+++|+++|+++. ....+++++++|+++.++..... .
T Consensus 153 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~ 232 (303)
T cd08251 153 SSDDKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLS 232 (303)
T ss_pred CCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChh
Confidence 999999999999998888765543321 12479999999863 57889999999999998754311 1
Q ss_pred ----ceEEEE-ec------C----HHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEE
Q 021628 249 ----ASSFVL-TS------D----GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306 (310)
Q Consensus 249 ----~~~~~~-~~------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi 306 (310)
...+.. .. . .+.+.++++++.++.+++. .++.|++++++++++.+.+++..+|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 233 VLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPT--VSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred HhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCC--CceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 111111 00 1 1346778889999988754 4688999999999999998888878764
No 117
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=1.4e-29 Score=225.01 Aligned_cols=291 Identities=34% Similarity=0.503 Sum_probs=231.4
Q ss_pred EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (310)
Q Consensus 2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~ 81 (310)
|++++...+.. ..++++ +.+.|++.+++|+||+.++++|++|...+.|.++. ....|..+|||++|+|+.+|+++++
T Consensus 1 ~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~g~~~~~ 77 (337)
T cd08275 1 RAVVLTGFGGL-DKLKVE-KEALPEPSSGEVRVRVEACGLNFADLMARQGLYDS-APKPPFVPGFECAGTVEAVGEGVKD 77 (337)
T ss_pred CeEEEcCCCCc-cceEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC-CCCCCCCCcceeEEEEEEECCCCcC
Confidence 67888877766 668888 78888899999999999999999999988776532 2345778999999999999999999
Q ss_pred CCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCC
Q 021628 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGA 160 (310)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~ 160 (310)
+++||+|++... .|+|++|+.++...++++|+++++.+++.+++.+.++|+++ +....++|++|+|+|++
T Consensus 78 ~~~G~~V~~~~~---------~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~ 148 (337)
T cd08275 78 FKVGDRVMGLTR---------FGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAA 148 (337)
T ss_pred CCCCCEEEEecC---------CCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCc
Confidence 999999999742 58999999999999999999999999999999999999998 57889999999999988
Q ss_pred cchHHHHHHHHHhhcCCcEEEEe-cChhhHHHHHHcCCCEEeeCCCCcccc-----cCCCccEEEeCCCC--hHHHHhhc
Q 021628 161 GGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVGQ--CDKALKAV 232 (310)
Q Consensus 161 g~~G~~a~~la~~~~g~~vi~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~dvvi~~~g~--~~~~~~~l 232 (310)
|.+|++++++|+.+ . .++++. .++++.+.++++|.+.+++.+..++.. ..+++|+++|+.|. ...+++++
T Consensus 149 g~~g~~~~~~a~~~-~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~l 226 (337)
T cd08275 149 GGVGLAAGQLCKTV-P-NVTVVGTASASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGEDTRKSYDLL 226 (337)
T ss_pred chHHHHHHHHHHHc-c-CcEEEEeCCHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhCCCceEEEECCcHHHHHHHHHhh
Confidence 99999999999984 2 223332 345678888889988887765443211 23579999999874 57889999
Q ss_pred ccCCEEEEEeCCCCC---------------------------CceEEEEe------cC----HHHHHHHHHHHHcCCeeE
Q 021628 233 KEGGRVVSIIGSVTP---------------------------PASSFVLT------SD----GSILEKLNPYFESGKVKA 275 (310)
Q Consensus 233 ~~~G~~v~~g~~~~~---------------------------~~~~~~~~------~~----~~~~~~~~~~~~~~~~~~ 275 (310)
+++|+++.+|..... .+..+... .. ...+.++++++.++.+.+
T Consensus 227 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (337)
T cd08275 227 KPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKP 306 (337)
T ss_pred ccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCC
Confidence 999999999754310 01111100 00 134677888999998775
Q ss_pred EecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628 276 IIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308 (310)
Q Consensus 276 ~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~ 308 (310)
. .++.|++++++++++.+.++...+|+++++
T Consensus 307 ~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 307 K--IDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred c--eeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 4 357899999999999999888888988764
No 118
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.98 E-value=3.2e-29 Score=221.00 Aligned_cols=291 Identities=40% Similarity=0.565 Sum_probs=235.8
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCC-CCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~-~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~ 79 (310)
||++++.+++.. ..+++. +.+ |.+. +++++|++.++++|++|+..+.|.+.. ....|..+|||++|+|+.+|+++
T Consensus 1 ~~~~~~~~~~~~-~~~~~~-~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~g~~~ 76 (323)
T cd08241 1 MKAVVCKELGGP-EDLVLE-EVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQV-KPPLPFVPGSEVAGVVEAVGEGV 76 (323)
T ss_pred CeEEEEecCCCc-ceeEEe-cCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCC-CCCCCCcccceeEEEEEEeCCCC
Confidence 899999977766 667887 777 6665 599999999999999999988776531 12346689999999999999999
Q ss_pred CCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hcccCCCCEEEEEc
Q 021628 80 KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLG 158 (310)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g 158 (310)
..+++||+|++... .|++++|+.++...++++|++++..+++.+.+.+.+|++++. ...++++++|+|+|
T Consensus 77 ~~~~~G~~V~~~~~---------~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g 147 (323)
T cd08241 77 TGFKVGDRVVALTG---------QGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLG 147 (323)
T ss_pred CCCCCCCEEEEecC---------CceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEc
Confidence 99999999999741 489999999999999999999999888888889999999984 68899999999999
Q ss_pred CCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHh
Q 021628 159 GAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALK 230 (310)
Q Consensus 159 ~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~ 230 (310)
++|.+|++++++++.. |++++.+++++++.+.++++|.+.+++....++.. ..+++|+++++.|. ...+++
T Consensus 148 ~~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~ 226 (323)
T cd08241 148 AAGGVGLAAVQLAKAL-GARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLR 226 (323)
T ss_pred CCchHHHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHHHHHHHHH
Confidence 8899999999999996 99999999999999999889987777765433321 12479999999874 578899
Q ss_pred hcccCCEEEEEeCCCCC-----------CceEEEEec-----------CHHHHHHHHHHHHcCCeeEEecCCcccchhhH
Q 021628 231 AVKEGGRVVSIIGSVTP-----------PASSFVLTS-----------DGSILEKLNPYFESGKVKAIIDPKGPFPFSQT 288 (310)
Q Consensus 231 ~l~~~G~~v~~g~~~~~-----------~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (310)
+++++|+++.++..... ....+.... ....+.++++++.++.+.+. .++.|+++++
T Consensus 227 ~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 304 (323)
T cd08241 227 SLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPH--VSAVFPLEQA 304 (323)
T ss_pred hhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccc--cceEEcHHHH
Confidence 99999999998753211 111111100 12457788999999988653 5688999999
Q ss_pred HHHHHHHHcCCCCccEEEE
Q 021628 289 LEAFSHLESSRATGKVVIH 307 (310)
Q Consensus 289 ~~a~~~~~~~~~~~k~vi~ 307 (310)
+++++.+.++...+|++++
T Consensus 305 ~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 305 AEALRALADRKATGKVVLT 323 (323)
T ss_pred HHHHHHHHhCCCCCcEEeC
Confidence 9999998888777788763
No 119
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.97 E-value=4.3e-29 Score=219.28 Aligned_cols=236 Identities=31% Similarity=0.460 Sum_probs=191.8
Q ss_pred CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~ 80 (310)
||+++..+.++ ..++++ +++.|++.+++|+||+.++++|++|.....+.+. ....|.++|+|++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~--~~~~~~-~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~--~~~~p~~~G~e~~G~V~~vG~~v~ 75 (306)
T cd08258 1 MKALVKTGPGP--GNVELR-EVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYD--PVETPVVLGHEFSGTIVEVGPDVE 75 (306)
T ss_pred CeeEEEecCCC--CceEEe-ecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCC--cCCCCeeeccceEEEEEEECCCcC
Confidence 89999987542 457888 8999999999999999999999999988887652 234578899999999999999999
Q ss_pred CCCCCCeeEeecCcccc-------------------CCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628 81 KFKVGDEVYGDINEKAL-------------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~-------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 141 (310)
.+++||+|++.....+. .+....|+|++|++++...++++|+++++.+++ ++..+.++|+
T Consensus 76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~ 154 (306)
T cd08258 76 GWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVH 154 (306)
T ss_pred cCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHH
Confidence 99999999986421000 001125899999999999999999999999887 6667788999
Q ss_pred HH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEe--cChhhHHHHHHcCCCEEeeCCCCcccc------cC
Q 021628 142 GL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT--SSTAKLDLLRSLGADLAIDYTKENIED------LP 212 (310)
Q Consensus 142 al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~ 212 (310)
++ ..++++++++|+|.| +|.+|.+++++|+.+ |.+++++. +++++.+.++++|++.+ +....++.. ..
T Consensus 155 ~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~-G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~ 231 (306)
T cd08258 155 AVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQ-GATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNEITDG 231 (306)
T ss_pred HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCC
Confidence 98 578899999999977 899999999999996 99987763 35567788889998877 665444321 12
Q ss_pred CCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC
Q 021628 213 EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 213 ~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~ 245 (310)
+++|++||+.|. ....+++|+++|+++.+|...
T Consensus 232 ~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 267 (306)
T cd08258 232 DGADVVIECSGAVPALEQALELLRKGGRIVQVGIFG 267 (306)
T ss_pred CCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccC
Confidence 479999999863 478899999999999998754
No 120
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.97 E-value=3.1e-29 Score=217.45 Aligned_cols=224 Identities=21% Similarity=0.237 Sum_probs=173.7
Q ss_pred ccccceeEEEEEeCCCCC------CCCCCCeeEeecCc-----------c-------ccC-------CCCCCCcceeEEE
Q 021628 63 IPGYDVAGVVEKVGSQVK------KFKVGDEVYGDINE-----------K-------ALD-------HPKRNGSLAEYTA 111 (310)
Q Consensus 63 ~~G~e~~G~V~~~g~~~~------~~~~Gd~V~~~~~~-----------~-------~~~-------~~~~~g~~~~~~~ 111 (310)
++|||++|+|+++|++++ ++++||||...+.. . ... +...+|+|+||++
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 479999999999999998 89999999764320 0 000 1113699999999
Q ss_pred EecC-ccccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhH
Q 021628 112 VEEN-LLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKL 189 (310)
Q Consensus 112 ~~~~-~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~ 189 (310)
+|.. .++++|+++++++++.+++++.|+|++++.....+|++|+|+| +|++|++++++|+.+ |++ |++++++++|+
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G-~G~vG~~~~~~ak~~-G~~~Vi~~~~~~~r~ 158 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVG-AGMLGLTAAAAAAAA-GAARVVAADPSPDRR 158 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHH
Confidence 9987 7999999999999999999999999999766677999999998 699999999999996 986 77888899999
Q ss_pred HHHHHcCCCEEeeCCCCc--ccc--cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCC--CCce----------
Q 021628 190 DLLRSLGADLAIDYTKEN--IED--LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT--PPAS---------- 250 (310)
Q Consensus 190 ~~~~~~g~~~~~~~~~~~--~~~--~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~--~~~~---------- 250 (310)
+.++++|++.+++..... ... ...++|++||++|. ++.++++++++|+++.+|.... +..+
T Consensus 159 ~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~~~ 238 (280)
T TIGR03366 159 ELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRRWL 238 (280)
T ss_pred HHHHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhCCc
Confidence 999999999888754321 111 12479999999974 4789999999999999985421 1111
Q ss_pred EEEE--ecCHHHHHHHHHHHHcC--CeeEEecCCcccchhhH
Q 021628 251 SFVL--TSDGSILEKLNPYFESG--KVKAIIDPKGPFPFSQT 288 (310)
Q Consensus 251 ~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 288 (310)
.+.. ....++++++++++.++ ++++...++++|+++|+
T Consensus 239 ~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 239 TIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred EEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 1111 11246788999999874 45554567888998763
No 121
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.97 E-value=5.7e-28 Score=209.74 Aligned_cols=260 Identities=34% Similarity=0.474 Sum_probs=213.4
Q ss_pred CcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCeeEeecCccccCCCCCCCcceeE
Q 021628 30 DQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEY 109 (310)
Q Consensus 30 ~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~ 109 (310)
+||+||+.++++|++|++...|.+ ..+|.++|||++|+|+++|+++..+++||+|++.. .|+|++|
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~----~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~----------~g~~~~~ 66 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL----PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA----------PGAFATH 66 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC----CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe----------cCcccce
Confidence 589999999999999999888754 23578899999999999999999999999999864 4899999
Q ss_pred EEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh
Q 021628 110 TAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK 188 (310)
Q Consensus 110 ~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~ 188 (310)
+.++...++++|++++..+++.+++++.++++++ +...+++|++|+|+|+.|.+|++++++++.+ |++++.+++++++
T Consensus 67 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~-g~~v~~~~~~~~~ 145 (293)
T cd05195 67 VRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHL-GAEVFATVGSEEK 145 (293)
T ss_pred EEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHc-CCEEEEEeCCHHH
Confidence 9999999999999999999999999999999998 5688999999999998999999999999996 9999999999999
Q ss_pred HHHHHHcC--CCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhhcccCCEEEEEeCCCCC--Cc-------
Q 021628 189 LDLLRSLG--ADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP--PA------- 249 (310)
Q Consensus 189 ~~~~~~~g--~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~~~~--~~------- 249 (310)
.+.+++++ .+.+++....++.. ..+++|+++++.|. ...++++++++|+++.++..... ..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~ 225 (293)
T cd05195 146 REFLRELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGMRPFL 225 (293)
T ss_pred HHHHHHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccchhhhc
Confidence 99998887 67777655433211 13479999999884 58899999999999998754311 01
Q ss_pred --eEEEE-ec------C----HHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEE
Q 021628 250 --SSFVL-TS------D----GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306 (310)
Q Consensus 250 --~~~~~-~~------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi 306 (310)
..+.. .. . ...+..+++++.++.+++. .++.+++++++++++.+.++...+|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 226 RNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPL--PPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred cCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccC--CCeeechhhHHHHHHHHhcCCCCceecC
Confidence 11111 00 1 2346778889999988753 4678999999999999998887777763
No 122
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.96 E-value=1.3e-27 Score=207.18 Aligned_cols=255 Identities=34% Similarity=0.507 Sum_probs=208.6
Q ss_pred EEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEe
Q 021628 34 IKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVE 113 (310)
Q Consensus 34 V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~ 113 (310)
||+.++++|++|++...|.++ .|.++|||++|+|+++|++++.+++||+|++.. .|+|++|+.++
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~-----~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------~g~~~~~~~~~ 66 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP-----GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------PGSFATYVRTD 66 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC-----CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc----------CCceeeEEEcc
Confidence 789999999999999887652 367899999999999999999999999999864 48999999999
Q ss_pred cCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 114 ENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 114 ~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.++++|+++++.+++.+++.+.++++++ +...+++|++|+|+|++|.+|++++++++.. |++++++++++++.+.+
T Consensus 67 ~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~ 145 (288)
T smart00829 67 ARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHL-GAEVFATAGSPEKRDFL 145 (288)
T ss_pred HHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 999999999999999999999999999998 6788999999999999999999999999995 99999999999999999
Q ss_pred HHcCC--CEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhhcccCCEEEEEeCCCC--CC---------ceE
Q 021628 193 RSLGA--DLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT--PP---------ASS 251 (310)
Q Consensus 193 ~~~g~--~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~~~--~~---------~~~ 251 (310)
+++|. +.+++....++.. ..+++|+++|+++. ....+++++++|+++.+|.... .. ...
T Consensus 146 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~ 225 (288)
T smart00829 146 RELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAPFRRNVS 225 (288)
T ss_pred HHcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhhhcCCce
Confidence 99997 6777665443221 12479999999873 4788999999999999975421 00 111
Q ss_pred EEEe-c-----C----HHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEE
Q 021628 252 FVLT-S-----D----GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306 (310)
Q Consensus 252 ~~~~-~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi 306 (310)
+... . . ...+..+++++.++++.+. ..+.|++++++++++.+..+...+|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 226 YHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--PVTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred EEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--CceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 1110 0 1 1346678888988888753 3578999999999999988877677663
No 123
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.95 E-value=3.3e-26 Score=197.00 Aligned_cols=212 Identities=40% Similarity=0.557 Sum_probs=177.8
Q ss_pred cEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCeeEeecCcc--------------c
Q 021628 31 QVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEK--------------A 96 (310)
Q Consensus 31 eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~~--------------~ 96 (310)
||+|++.++++|++|+..+.|..+ .....|.++|||++|+|+++|++++.+++||+|++..... .
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~ 79 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYP-PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGG 79 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCC-cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCC
Confidence 689999999999999999988653 1245578899999999999999999999999999875311 1
Q ss_pred cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hcccCCCCEEEEEcCCcchHHHHHHHHHhhc
Q 021628 97 LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGGAGGVGTMVIQLAKHVF 175 (310)
Q Consensus 97 ~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~ 175 (310)
..+....|++++|+.++...++++|+++++.+++.+++.+.+||+++. ...++++++|+|+|+.+ +|++++++++..
T Consensus 80 ~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~- 157 (271)
T cd05188 80 ILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAA- 157 (271)
T ss_pred EeccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHc-
Confidence 112223689999999999999999999999999999999999999995 55568999999999666 999999999996
Q ss_pred CCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc-----cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC
Q 021628 176 GASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 176 g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~ 245 (310)
|.+++++++++++.+.++++|.+.+++....+... ..+++|++|++++. ...++++++++|+++.++...
T Consensus 158 g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~ 235 (271)
T cd05188 158 GARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTS 235 (271)
T ss_pred CCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCC
Confidence 99999999999999999999988887765443322 13579999999875 478899999999999998654
No 124
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.95 E-value=9.3e-26 Score=195.41 Aligned_cols=229 Identities=32% Similarity=0.392 Sum_probs=185.1
Q ss_pred CCCCcccccceeEEEEEeCCCCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHH
Q 021628 58 SPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATE 137 (310)
Q Consensus 58 ~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ 137 (310)
..+|.++|||++|+|+++|++++++++||+|+++ +.|++|+.++...++++|++++..+++.+ +.++
T Consensus 18 ~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~------------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ 84 (277)
T cd08255 18 LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF------------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAA 84 (277)
T ss_pred CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec------------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHH
Confidence 4578999999999999999999999999999985 46999999999999999999999999888 7899
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcC-CCEEeeCCCCcccccCCCc
Q 021628 138 TAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLG-ADLAIDYTKENIEDLPEKF 215 (310)
Q Consensus 138 ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~ 215 (310)
+||+++...++++|++++|+| +|.+|++++++|+.+ |.+ ++++++++++.+.++++| .+.+++..... ...+++
T Consensus 85 ta~~~~~~~~~~~g~~vlI~g-~g~vg~~~i~~a~~~-g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~ 160 (277)
T cd08255 85 TALNGVRDAEPRLGERVAVVG-LGLVGLLAAQLAKAA-GAREVVGVDPDAARRELAEALGPADPVAADTADE--IGGRGA 160 (277)
T ss_pred HHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCcEEEECCCHHHHHHHHHcCCCccccccchhh--hcCCCC
Confidence 999998888999999999997 799999999999996 888 899999999999889998 55555433211 123479
Q ss_pred cEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCC----------CceEEEE---ec-----------CHHHHHHHHHHH
Q 021628 216 DVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP----------PASSFVL---TS-----------DGSILEKLNPYF 268 (310)
Q Consensus 216 dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~----------~~~~~~~---~~-----------~~~~~~~~~~~~ 268 (310)
|++||+++. ....+++++++|+++.+|..... ....+.. .. ..+.++++++++
T Consensus 161 d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (277)
T cd08255 161 DVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLL 240 (277)
T ss_pred CEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHH
Confidence 999999763 47889999999999999754321 0111111 00 124688899999
Q ss_pred HcCCeeEEecCCcccchhhHHHHHHHHHcC-CCCccEE
Q 021628 269 ESGKVKAIIDPKGPFPFSQTLEAFSHLESS-RATGKVV 305 (310)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~k~v 305 (310)
.++.+++. +.+.|++++++++++.+.++ ....|++
T Consensus 241 ~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~k~~ 276 (277)
T cd08255 241 AEGRLEAL--ITHRVPFEDAPEAYRLLFEDPPECLKVV 276 (277)
T ss_pred HcCCcccc--ccCccCHHHHHHHHHHHHcCCccceeee
Confidence 99997764 46889999999999999877 3444654
No 125
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.94 E-value=5e-26 Score=214.44 Aligned_cols=277 Identities=23% Similarity=0.308 Sum_probs=225.6
Q ss_pred CCCccceEEeccccCC---CCCCCcEEEEEeEeecCHHHHHHHhCCCCCCC-----CCCCcccccceeEEEEEeCCCCCC
Q 021628 10 GNSQSVLKFETNVEVP---SLREDQVLIKVVAAALNPIDFKRMLGAFSATD-----SPLPTIPGYDVAGVVEKVGSQVKK 81 (310)
Q Consensus 10 g~~~~~l~~~~~~~~~---~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~-----~~~p~~~G~e~~G~V~~~g~~~~~ 81 (310)
|++ ..|+|. +.|.. +..++.=+.-|.|++|+.+|+....|..+... ....+++|-|++|+
T Consensus 1424 GDl-sSlrWi-es~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR---------- 1491 (2376)
T KOG1202|consen 1424 GDL-SSLRWI-ESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR---------- 1491 (2376)
T ss_pred ccc-cceeee-ecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------
Confidence 666 789998 77754 34778788899999999999999999875321 23458899999887
Q ss_pred CCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCC
Q 021628 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGA 160 (310)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~ 160 (310)
.+-|.||.++.+ --+.++.+.++.+.++.+|+++..++|+.+|+-+.|+|||+ .+...++|+++|||+++
T Consensus 1492 d~~GrRvM~mvp---------AksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGs 1562 (2376)
T KOG1202|consen 1492 DASGRRVMGMVP---------AKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGS 1562 (2376)
T ss_pred cCCCcEEEEeee---------hhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCC
Confidence 455999999865 46789999999999999999999999999999999999999 68999999999999999
Q ss_pred cchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-c---CCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHH
Q 021628 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-L---GADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKA 228 (310)
Q Consensus 161 g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~---g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~ 228 (310)
|++|++|+.+|.++ |+.|+.++.+.||++++.+ | ...++-|+.+.++.. ..+|+|+|++.... ++..
T Consensus 1563 GGVGQAAIaiALa~-G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeEkLQAS 1641 (2376)
T KOG1202|consen 1563 GGVGQAAIAIALAH-GCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEEKLQAS 1641 (2376)
T ss_pred CchhHHHHHHHHHc-CCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHHHHHHH
Confidence 99999999999996 9999999999999999954 3 345667777777643 35699999998763 6889
Q ss_pred HhhcccCCEEEEEeCCCCCC-----------ceEEEE-------ecCHHHHHHHHHHHHcC----CeeEEecCCcccchh
Q 021628 229 LKAVKEGGRVVSIIGSVTPP-----------ASSFVL-------TSDGSILEKLNPYFESG----KVKAIIDPKGPFPFS 286 (310)
Q Consensus 229 ~~~l~~~G~~v~~g~~~~~~-----------~~~~~~-------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 286 (310)
++||+..|||...|....+. +.+|.. ....+.+.++.+++++| ..+| +++++|+-.
T Consensus 1642 iRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~P--L~ttvF~~~ 1719 (2376)
T KOG1202|consen 1642 IRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRP--LPTTVFHGQ 1719 (2376)
T ss_pred HHHHHhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceec--cccccccHH
Confidence 99999999999998654322 222321 11235566777777664 4444 568999999
Q ss_pred hHHHHHHHHHcCCCCccEEEEeCC
Q 021628 287 QTLEAFSHLESSRATGKVVIHPIP 310 (310)
Q Consensus 287 ~~~~a~~~~~~~~~~~k~vi~~~~ 310 (310)
++++||+.|.+++..||+|++..+
T Consensus 1720 qvE~AFRfMasGKHIGKVvikvr~ 1743 (2376)
T KOG1202|consen 1720 QVEDAFRFMASGKHIGKVVIKVRA 1743 (2376)
T ss_pred HHHHHHHHHhccCccceEEEEEcc
Confidence 999999999999999999998753
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.93 E-value=4.6e-23 Score=170.53 Aligned_cols=267 Identities=27% Similarity=0.351 Sum_probs=204.5
Q ss_pred CCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccc----cceeEEEEEeCCCCCCCCCCCeeEeecCccccCCC
Q 021628 25 PSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPG----YDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHP 100 (310)
Q Consensus 25 ~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G----~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~~~~~~~ 100 (310)
.++++++|+||..|.+..+.-...+....+. .--.|+.+| ..++|+|++ ++-+++++||.|.++.
T Consensus 33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~-~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~~-------- 101 (343)
T KOG1196|consen 33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPS-DYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGIV-------- 101 (343)
T ss_pred CCCCCccEEeEeeeecCCHHHHhhccCCCcc-cccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEec--------
Confidence 4579999999999999998865544333221 011222333 367899998 4557899999999974
Q ss_pred CCCCcceeEEEEecC--ccccCCC--CCChhhhcc-ccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhh
Q 021628 101 KRNGSLAEYTAVEEN--LLALKPK--NLSFVEAAS-LPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHV 174 (310)
Q Consensus 101 ~~~g~~~~~~~~~~~--~~~~ip~--~~~~~~aa~-~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~ 174 (310)
+|.+|.+++.. ..++++. +.++-.... +.++.+|||-.+ +.+.+++|++|+|.||+|++|+++.|+|+.+
T Consensus 102 ----gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~ 177 (343)
T KOG1196|consen 102 ----GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLM 177 (343)
T ss_pred ----cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhc
Confidence 79999999764 3445443 455444433 367888999888 6899999999999999999999999999998
Q ss_pred cCCcEEEEecChhhHHHH-HHcCCCEEeeCCCC-cccc-----cCCCccEEEeCCCC--hHHHHhhcccCCEEEEEeCCC
Q 021628 175 FGASKVAATSSTAKLDLL-RSLGADLAIDYTKE-NIED-----LPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 175 ~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~-~~~~-----~~~~~dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~~ 245 (310)
|++|+..+.+.||..++ +++|.|..+|+.++ +... .++|.|+.||.+|. ....+..|...||++.+|..+
T Consensus 178 -Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~IS 256 (343)
T KOG1196|consen 178 -GCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMIS 256 (343)
T ss_pred -CCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeeh
Confidence 99999999999999999 46899999999887 4332 25699999999984 478899999999999998643
Q ss_pred -----CCCc---eEE-----------EEe----cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCc
Q 021628 246 -----TPPA---SSF-----------VLT----SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATG 302 (310)
Q Consensus 246 -----~~~~---~~~-----------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 302 (310)
.+.. ..+ ... ...+.+..+.+++++|+|+....+ .-.++..+.||..|..++..|
T Consensus 257 qYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi--~~Glen~P~A~vglf~GkNvG 334 (343)
T KOG1196|consen 257 QYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDI--ADGLENGPSALVGLFHGKNVG 334 (343)
T ss_pred hccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhH--HHHHhccHHHHHHHhccCccc
Confidence 1111 111 111 123557889999999999987543 457999999999999999999
Q ss_pred cEEEEeC
Q 021628 303 KVVIHPI 309 (310)
Q Consensus 303 k~vi~~~ 309 (310)
|.++++.
T Consensus 335 Kqiv~va 341 (343)
T KOG1196|consen 335 KQLVKVA 341 (343)
T ss_pred ceEEEee
Confidence 9998764
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.74 E-value=1.8e-17 Score=122.83 Aligned_cols=91 Identities=33% Similarity=0.380 Sum_probs=73.6
Q ss_pred CCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCeeEeecC---------------
Q 021628 29 EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDIN--------------- 93 (310)
Q Consensus 29 ~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~--------------- 93 (310)
||||+||+.+++||++|++.+.|.. .....+|.++|||++|+|+++|+++.+|++||+|+..+.
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~-~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~ 79 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGP-PPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPN 79 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSS-SSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhcc-ccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCccc
Confidence 6899999999999999999999842 134678999999999999999999999999999988542
Q ss_pred ---ccccCCCCCCCcceeEEEEecCccccC
Q 021628 94 ---EKALDHPKRNGSLAEYTAVEENLLALK 120 (310)
Q Consensus 94 ---~~~~~~~~~~g~~~~~~~~~~~~~~~i 120 (310)
.....+...+|+|++|+++|.++++++
T Consensus 80 ~c~~~~~~g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 80 LCPNPEVLGLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp GTTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred cCCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence 112234456899999999999998874
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.31 E-value=2e-11 Score=93.20 Aligned_cols=83 Identities=42% Similarity=0.643 Sum_probs=73.0
Q ss_pred chHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccccc----C--CCccEEEeCCCC---hHHHHhhc
Q 021628 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL----P--EKFDVVFDAVGQ---CDKALKAV 232 (310)
Q Consensus 162 ~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~--~~~dvvi~~~g~---~~~~~~~l 232 (310)
++|++++|+|+.+ |++|++++++++|++.++++|+++++++++.++.+. . +++|+||||+|+ ++.+++++
T Consensus 1 ~vG~~a~q~ak~~-G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l 79 (130)
T PF00107_consen 1 GVGLMAIQLAKAM-GAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL 79 (130)
T ss_dssp HHHHHHHHHHHHT-TSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred ChHHHHHHHHHHc-CCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence 4899999999996 899999999999999999999999999887754321 2 379999999994 58999999
Q ss_pred ccCCEEEEEeCCC
Q 021628 233 KEGGRVVSIIGSV 245 (310)
Q Consensus 233 ~~~G~~v~~g~~~ 245 (310)
+++|+++.+|.+.
T Consensus 80 ~~~G~~v~vg~~~ 92 (130)
T PF00107_consen 80 RPGGRIVVVGVYG 92 (130)
T ss_dssp EEEEEEEEESSTS
T ss_pred ccCCEEEEEEccC
Confidence 9999999999776
No 129
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.16 E-value=3.8e-11 Score=91.33 Aligned_cols=108 Identities=40% Similarity=0.557 Sum_probs=74.7
Q ss_pred cCCCEEeeCCCCcccccCCCccEEEeCCC--C--h-HHHHhhcccCCEEEEEeCC-C------CCCceEEEEec------
Q 021628 195 LGADLAIDYTKENIEDLPEKFDVVFDAVG--Q--C-DKALKAVKEGGRVVSIIGS-V------TPPASSFVLTS------ 256 (310)
Q Consensus 195 ~g~~~~~~~~~~~~~~~~~~~dvvi~~~g--~--~-~~~~~~l~~~G~~v~~g~~-~------~~~~~~~~~~~------ 256 (310)
||++++++++.+++ ...+++|+|||+.| . . ..++++| ++|+++.++.. . ...........
T Consensus 1 LGAd~vidy~~~~~-~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (127)
T PF13602_consen 1 LGADEVIDYRDTDF-AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGGDLPSFARRLKGRSIRYSFLFSVDPNA 78 (127)
T ss_dssp CT-SEEEETTCSHH-HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-SHHHHHHHHHHCHHCEEECCC-H--HH
T ss_pred CCcCEEecCCCccc-cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECCcccchhhhhcccceEEEEEEecCCCc
Confidence 68899999987666 44679999999998 3 1 5566777 99999999851 1 01112222111
Q ss_pred -CHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEE
Q 021628 257 -DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306 (310)
Q Consensus 257 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi 306 (310)
..+.++++.+++.+|++++.+ .++||++++.+|++.+.+++..||+||
T Consensus 79 ~~~~~l~~l~~l~~~G~l~~~i--~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 79 IRAEALEELAELVAEGKLKPPI--DRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HHHHHHHHHHHHHHTTSS---E--EEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred hHHHHHHHHHHHHHCCCeEEee--ccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 235699999999999999975 478999999999999999999999986
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.14 E-value=8.9e-10 Score=99.07 Aligned_cols=162 Identities=19% Similarity=0.199 Sum_probs=116.5
Q ss_pred HHHHH-Hh-cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCcc
Q 021628 139 AYEGL-ER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFD 216 (310)
Q Consensus 139 a~~al-~~-~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d 216 (310)
.+.++ +. ....+|++|+|.| .|.+|+.+++.++.+ |++|++++.++.|++.++.+|++.+ +. .+..+++|
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG-~G~IG~~va~~ak~~-Ga~ViV~d~d~~R~~~A~~~G~~~~-~~-----~e~v~~aD 259 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQSLRGQ-GARVIVTEVDPICALQAAMEGYEVM-TM-----EEAVKEGD 259 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEECChhhHHHHHhcCCEEc-cH-----HHHHcCCC
Confidence 34454 32 3346899999999 999999999999996 9999999999999999999997533 11 12235789
Q ss_pred EEEeCCCC---hHH-HHhhcccCCEEEEEeCCCCCC--------ceEEE-EecC-HH-HHH--HHHHHHHcCCe-eEEec
Q 021628 217 VVFDAVGQ---CDK-ALKAVKEGGRVVSIIGSVTPP--------ASSFV-LTSD-GS-ILE--KLNPYFESGKV-KAIID 278 (310)
Q Consensus 217 vvi~~~g~---~~~-~~~~l~~~G~~v~~g~~~~~~--------~~~~~-~~~~-~~-~~~--~~~~~~~~~~~-~~~~~ 278 (310)
+||+|+|+ +.. .+.+++++|+++.+|.....- ..... .... .+ .++ ..+.++.+|++ .....
T Consensus 260 VVI~atG~~~~i~~~~l~~mk~GgilvnvG~~~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~~~ 339 (413)
T cd00401 260 IFVTTTGNKDIITGEHFEQMKDGAIVCNIGHFDVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLGCA 339 (413)
T ss_pred EEEECCCCHHHHHHHHHhcCCCCcEEEEeCCCCCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCccc
Confidence 99999985 344 489999999999998643111 11111 1111 11 345 68999999998 65556
Q ss_pred CCcc-----cchh-hHHHHHHHHHcCCCC-ccEEEEe
Q 021628 279 PKGP-----FPFS-QTLEAFSHLESSRAT-GKVVIHP 308 (310)
Q Consensus 279 ~~~~-----~~~~-~~~~a~~~~~~~~~~-~k~vi~~ 308 (310)
.+|. ++|+ |+.+++..+.++... .|+++.+
T Consensus 340 ~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p 376 (413)
T cd00401 340 TGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLP 376 (413)
T ss_pred CCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECC
Confidence 6788 9999 999999998876542 4565543
No 131
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.00 E-value=3.5e-09 Score=97.64 Aligned_cols=131 Identities=18% Similarity=0.236 Sum_probs=94.3
Q ss_pred cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCCCcc------------------
Q 021628 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKENI------------------ 208 (310)
Q Consensus 148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~~~------------------ 208 (310)
..++++|+|+| +|.+|++|++.|+.+ |++|++++.++++++.++++|++.+ ++..+++.
T Consensus 162 ~~pg~kVlViG-aG~iGL~Ai~~Ak~l-GA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 162 KVPPAKVLVIG-AGVAGLAAIGAAGSL-GAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CcCCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 46899999999 999999999999997 9999999999999999999999854 55432110
Q ss_pred ---cccCCCccEEEeCCCC---------hHHHHhhcccCCEEEEEeCCC-C----CC---------ceEEEE-ecCHHHH
Q 021628 209 ---EDLPEKFDVVFDAVGQ---------CDKALKAVKEGGRVVSIIGSV-T----PP---------ASSFVL-TSDGSIL 261 (310)
Q Consensus 209 ---~~~~~~~dvvi~~~g~---------~~~~~~~l~~~G~~v~~g~~~-~----~~---------~~~~~~-~~~~~~~ 261 (310)
.+..+++|+||+|++. .++.++.++++|+++.++... . .. ...+.. ......+
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~ 319 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRL 319 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhH
Confidence 0112579999999973 388999999999999998642 1 11 001111 1122334
Q ss_pred H-HHHHHHHcCCeeEEecCC
Q 021628 262 E-KLNPYFESGKVKAIIDPK 280 (310)
Q Consensus 262 ~-~~~~~~~~~~~~~~~~~~ 280 (310)
. ...+++.++.++.....+
T Consensus 320 p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 320 PTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred HHHHHHHHHhCCccHHHHhc
Confidence 4 588888888876544333
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.34 E-value=1.6e-05 Score=68.68 Aligned_cols=158 Identities=18% Similarity=0.233 Sum_probs=96.6
Q ss_pred hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC--cEEEEecChhhHHHHHH----cCCCEE--eeCCCCcccccCCCcc
Q 021628 145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLRS----LGADLA--IDYTKENIEDLPEKFD 216 (310)
Q Consensus 145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~--~vi~~~~~~~~~~~~~~----~g~~~~--~~~~~~~~~~~~~~~d 216 (310)
.+.+++|++||.+| +|. |..+..+++.. +. +++.++.+++.++.+++ .+.+.+ +..+-+......+.+|
T Consensus 72 ~~~~~~g~~VLDiG-~G~-G~~~~~~a~~~-g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~~~~~~fD 148 (272)
T PRK11873 72 LAELKPGETVLDLG-SGG-GFDCFLAARRV-GPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLGEIEALPVADNSVD 148 (272)
T ss_pred hccCCCCCEEEEeC-CCC-CHHHHHHHHHh-CCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCCCCCCcee
Confidence 45688999999999 777 98888888875 54 68899999998888865 333221 1111111111234799
Q ss_pred EEEeCC-C----C----hHHHHhhcccCCEEEEEeCCCCCC---ce----EEEE--ecCHHHHHHHHHHHHc-CCeeEEe
Q 021628 217 VVFDAV-G----Q----CDKALKAVKEGGRVVSIIGSVTPP---AS----SFVL--TSDGSILEKLNPYFES-GKVKAII 277 (310)
Q Consensus 217 vvi~~~-g----~----~~~~~~~l~~~G~~v~~g~~~~~~---~~----~~~~--~~~~~~~~~~~~~~~~-~~~~~~~ 277 (310)
+|+... . + +.++.+.|+|+|+++..+...... .+ .+.. ........++.+++.+ |......
T Consensus 149 ~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~aGf~~v~i 228 (272)
T PRK11873 149 VIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGELPEEIRNDAELYAGCVAGALQEEEYLAMLAEAGFVDITI 228 (272)
T ss_pred EEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCCCCHHHHHhHHHHhccccCCCCHHHHHHHHHHCCCCceEE
Confidence 998653 1 1 478999999999999876432111 00 0000 0001123456666665 3333333
Q ss_pred cCCcccchhhHHHHHHHH--HcCCCCccEE
Q 021628 278 DPKGPFPFSQTLEAFSHL--ESSRATGKVV 305 (310)
Q Consensus 278 ~~~~~~~~~~~~~a~~~~--~~~~~~~k~v 305 (310)
.....+++++..++++.+ .++...++.+
T Consensus 229 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 258 (272)
T PRK11873 229 QPKREYRIPDAREFLEDWGIAPGRQLDGYI 258 (272)
T ss_pred EeccceecccHHHHHHHhccccccccCceE
Confidence 345678899999999888 5554444443
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.31 E-value=4.6e-06 Score=77.06 Aligned_cols=94 Identities=22% Similarity=0.435 Sum_probs=74.5
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCCC-------------c-------
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKE-------------N------- 207 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~-------------~------- 207 (310)
.++++|+|+| +|.+|++++++++.+ |++|++++.++++++.++++|.+.+ ++..++ +
T Consensus 162 vp~akVlViG-aG~iGl~Aa~~ak~l-GA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~ 239 (511)
T TIGR00561 162 VPPAKVLVIG-AGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME 239 (511)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence 4679999999 899999999999996 9999999999999999999998653 332110 0
Q ss_pred -ccccCCCccEEEeCC---C--C----hHHHHhhcccCCEEEEEeCC
Q 021628 208 -IEDLPEKFDVVFDAV---G--Q----CDKALKAVKEGGRVVSIIGS 244 (310)
Q Consensus 208 -~~~~~~~~dvvi~~~---g--~----~~~~~~~l~~~G~~v~~g~~ 244 (310)
+.+..+++|++|+|+ | . .++.++.|++++.++.++..
T Consensus 240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d 286 (511)
T TIGR00561 240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAE 286 (511)
T ss_pred HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeC
Confidence 111235799999998 4 2 27889999999999999644
No 134
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.16 E-value=1.5e-05 Score=72.20 Aligned_cols=100 Identities=23% Similarity=0.298 Sum_probs=76.0
Q ss_pred HHHHHHHhc-ccC-CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCc
Q 021628 138 TAYEGLERS-AFS-AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKF 215 (310)
Q Consensus 138 ta~~al~~~-~~~-~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 215 (310)
..|.++..+ .+. .|++|+|.| .|.+|...++.++.+ |++|++++.++.+...+...|.+ +.+ ..+..+++
T Consensus 197 s~~~ai~rat~~~l~Gk~VlViG-~G~IG~~vA~~lr~~-Ga~ViV~d~dp~ra~~A~~~G~~-v~~-----l~eal~~a 268 (425)
T PRK05476 197 SLLDGIKRATNVLIAGKVVVVAG-YGDVGKGCAQRLRGL-GARVIVTEVDPICALQAAMDGFR-VMT-----MEEAAELG 268 (425)
T ss_pred hhHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEcCCchhhHHHHhcCCE-ecC-----HHHHHhCC
Confidence 355666433 444 899999999 899999999999996 99999999998887666666654 221 22334589
Q ss_pred cEEEeCCCC---h-HHHHhhcccCCEEEEEeCCC
Q 021628 216 DVVFDAVGQ---C-DKALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 216 dvvi~~~g~---~-~~~~~~l~~~G~~v~~g~~~ 245 (310)
|+||+++|+ + ...+..+++++.++..|...
T Consensus 269 DVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 269 DIFVTATGNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred CEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 999999985 2 36788999999999887643
No 135
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.11 E-value=3.9e-05 Score=66.87 Aligned_cols=91 Identities=19% Similarity=0.372 Sum_probs=72.7
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC---hH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---CD 226 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---~~ 226 (310)
.+.+|+|+| .|.+|+.++..++.+ |++|++.++++++++.++++|...+ .. ++..+...++|+||+|++. .+
T Consensus 151 ~g~kvlViG-~G~iG~~~a~~L~~~-Ga~V~v~~r~~~~~~~~~~~G~~~~-~~--~~l~~~l~~aDiVI~t~p~~~i~~ 225 (296)
T PRK08306 151 HGSNVLVLG-FGRTGMTLARTLKAL-GANVTVGARKSAHLARITEMGLSPF-HL--SELAEEVGKIDIIFNTIPALVLTK 225 (296)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCCeee-cH--HHHHHHhCCCCEEEECCChhhhhH
Confidence 589999999 899999999999996 9999999999988888888886532 11 1223334579999999873 26
Q ss_pred HHHhhcccCCEEEEEeCCC
Q 021628 227 KALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 227 ~~~~~l~~~G~~v~~g~~~ 245 (310)
..++.+++++.++.++..+
T Consensus 226 ~~l~~~~~g~vIIDla~~p 244 (296)
T PRK08306 226 EVLSKMPPEALIIDLASKP 244 (296)
T ss_pred HHHHcCCCCcEEEEEccCC
Confidence 7788899999999887654
No 136
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=97.98 E-value=6.3e-05 Score=67.87 Aligned_cols=89 Identities=21% Similarity=0.268 Sum_probs=70.6
Q ss_pred cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC---
Q 021628 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--- 224 (310)
Q Consensus 148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~--- 224 (310)
...|++|+|.| .|.+|+..++.++.+ |++|++++.++.+...+...|.. +.+. .+..++.|+||++.|+
T Consensus 192 ~l~Gk~VvViG-~G~IG~~vA~~ak~~-Ga~ViV~d~dp~r~~~A~~~G~~-v~~l-----eeal~~aDVVItaTG~~~v 263 (406)
T TIGR00936 192 LIAGKTVVVAG-YGWCGKGIAMRARGM-GARVIVTEVDPIRALEAAMDGFR-VMTM-----EEAAKIGDIFITATGNKDV 263 (406)
T ss_pred CCCcCEEEEEC-CCHHHHHHHHHHhhC-cCEEEEEeCChhhHHHHHhcCCE-eCCH-----HHHHhcCCEEEECCCCHHH
Confidence 46899999999 999999999999995 99999999888887666666753 2211 2223578999999985
Q ss_pred h-HHHHhhcccCCEEEEEeCC
Q 021628 225 C-DKALKAVKEGGRVVSIIGS 244 (310)
Q Consensus 225 ~-~~~~~~l~~~G~~v~~g~~ 244 (310)
+ ...+..+++++.++.+|..
T Consensus 264 I~~~~~~~mK~GailiN~G~~ 284 (406)
T TIGR00936 264 IRGEHFENMKDGAIVANIGHF 284 (406)
T ss_pred HHHHHHhcCCCCcEEEEECCC
Confidence 2 3588899999999988764
No 137
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.92 E-value=0.00039 Score=59.23 Aligned_cols=157 Identities=19% Similarity=0.244 Sum_probs=96.7
Q ss_pred CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCC
Q 021628 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGA 160 (310)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~ 160 (310)
.+.+|++++..+ +|.++.. +...++.+++++++..+..-.... .+..+. ....++++|+-+| +
T Consensus 66 p~~~g~~~~i~p------------~~~~~~~-~~~~~i~i~p~~afgtg~h~tt~~--~l~~l~-~~~~~~~~VLDiG-c 128 (250)
T PRK00517 66 PIRIGDRLWIVP------------SWEDPPD-PDEINIELDPGMAFGTGTHPTTRL--CLEALE-KLVLPGKTVLDVG-C 128 (250)
T ss_pred CEEEcCCEEEEC------------CCcCCCC-CCeEEEEECCCCccCCCCCHHHHH--HHHHHH-hhcCCCCEEEEeC-C
Confidence 367888877654 3555543 666778888887776543221111 122222 2356899999999 7
Q ss_pred cchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHc----CCCEEeeCCCCcccccCCCccEEEeCCC-C-----hHHHH
Q 021628 161 GGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSL----GADLAIDYTKENIEDLPEKFDVVFDAVG-Q-----CDKAL 229 (310)
Q Consensus 161 g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~dvvi~~~g-~-----~~~~~ 229 (310)
|. |.+++.+++. |. +++.++.++...+.+++. +....+.. ......+|+|+.... . ++.+.
T Consensus 129 Gs-G~l~i~~~~~--g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~-----~~~~~~fD~Vvani~~~~~~~l~~~~~ 200 (250)
T PRK00517 129 GS-GILAIAAAKL--GAKKVLAVDIDPQAVEAARENAELNGVELNVYL-----PQGDLKADVIVANILANPLLELAPDLA 200 (250)
T ss_pred cH-HHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEE-----ccCCCCcCEEEEcCcHHHHHHHHHHHH
Confidence 76 9888876664 55 588999999988877542 22110110 000115899987654 2 36788
Q ss_pred hhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCeeE
Q 021628 230 KAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKA 275 (310)
Q Consensus 230 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (310)
+.|+++|+++..+. .......+.+.+.+..+..
T Consensus 201 ~~LkpgG~lilsgi-------------~~~~~~~v~~~l~~~Gf~~ 233 (250)
T PRK00517 201 RLLKPGGRLILSGI-------------LEEQADEVLEAYEEAGFTL 233 (250)
T ss_pred HhcCCCcEEEEEEC-------------cHhhHHHHHHHHHHCCCEE
Confidence 89999999998763 2234455666666655543
No 138
>PLN02494 adenosylhomocysteinase
Probab=97.82 E-value=7.9e-05 Score=67.95 Aligned_cols=88 Identities=20% Similarity=0.220 Sum_probs=70.9
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC---h
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---C 225 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---~ 225 (310)
-.|++|+|.| .|.+|...++.++.. |++|+++..++.+...+...|...+ + ..+....+|+|+++.|+ +
T Consensus 252 LaGKtVvViG-yG~IGr~vA~~aka~-Ga~VIV~e~dp~r~~eA~~~G~~vv-~-----leEal~~ADVVI~tTGt~~vI 323 (477)
T PLN02494 252 IAGKVAVICG-YGDVGKGCAAAMKAA-GARVIVTEIDPICALQALMEGYQVL-T-----LEDVVSEADIFVTTTGNKDII 323 (477)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchhhHHHHhcCCeec-c-----HHHHHhhCCEEEECCCCccch
Confidence 5799999999 999999999999995 9999999988887666666665422 1 22233578999999884 2
Q ss_pred -HHHHhhcccCCEEEEEeCC
Q 021628 226 -DKALKAVKEGGRVVSIIGS 244 (310)
Q Consensus 226 -~~~~~~l~~~G~~v~~g~~ 244 (310)
...+..|++++.++.+|..
T Consensus 324 ~~e~L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 324 MVDHMRKMKNNAIVCNIGHF 343 (477)
T ss_pred HHHHHhcCCCCCEEEEcCCC
Confidence 7889999999999999874
No 139
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.72 E-value=0.0008 Score=54.70 Aligned_cols=101 Identities=22% Similarity=0.270 Sum_probs=72.1
Q ss_pred HHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh----HHHHHHcCCCEEe-eCCCCccccc-C
Q 021628 139 AYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK----LDLLRSLGADLAI-DYTKENIEDL-P 212 (310)
Q Consensus 139 a~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~----~~~~~~~g~~~~~-~~~~~~~~~~-~ 212 (310)
...+++...+++|++||-+| .+.|..++-+++.. + +|+.+.+.++= .+.++.+|...+. ...+-..... .
T Consensus 61 vA~m~~~L~~~~g~~VLEIG--tGsGY~aAvla~l~-~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G~~~~ 136 (209)
T COG2518 61 VARMLQLLELKPGDRVLEIG--TGSGYQAAVLARLV-G-RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKGWPEE 136 (209)
T ss_pred HHHHHHHhCCCCCCeEEEEC--CCchHHHHHHHHHh-C-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccCCCCC
Confidence 33456788999999999998 56799999999985 5 89999888773 3445668864432 2222111111 2
Q ss_pred CCccEEEeCCC--C-hHHHHhhcccCCEEEEEeC
Q 021628 213 EKFDVVFDAVG--Q-CDKALKAVKEGGRVVSIIG 243 (310)
Q Consensus 213 ~~~dvvi~~~g--~-~~~~~~~l~~~G~~v~~g~ 243 (310)
..+|.++-+++ . ++..++.|++||+++.--+
T Consensus 137 aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 137 APYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred CCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 46899987765 2 5888999999999997755
No 140
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.68 E-value=0.00011 Score=64.55 Aligned_cols=104 Identities=22% Similarity=0.273 Sum_probs=73.0
Q ss_pred CccccCCCCCChhhhccc-cchHHHHHHHHHhccc----CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhH
Q 021628 115 NLLALKPKNLSFVEAASL-PLATETAYEGLERSAF----SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL 189 (310)
Q Consensus 115 ~~~~~ip~~~~~~~aa~~-~~~~~ta~~al~~~~~----~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~ 189 (310)
..++++|+.+..+.++.. +.+ .++.+++.+.. -++.+|+|.| +|.+|.++++.++..++.+++++.+++++.
T Consensus 139 ~~a~~~~k~vr~et~i~~~~~s--v~~~Av~~a~~~~~~l~~~~V~ViG-aG~iG~~~a~~L~~~g~~~V~v~~r~~~ra 215 (311)
T cd05213 139 QKAIKVGKRVRTETGISRGAVS--ISSAAVELAEKIFGNLKGKKVLVIG-AGEMGELAAKHLAAKGVAEITIANRTYERA 215 (311)
T ss_pred HHHHHHHHHHhhhcCCCCCCcC--HHHHHHHHHHHHhCCccCCEEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence 356788888888877766 444 46667754332 4799999999 799999999988874235778888888875
Q ss_pred -HHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC
Q 021628 190 -DLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ 224 (310)
Q Consensus 190 -~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~ 224 (310)
+.++++|.. +.+.. +..+....+|+||.|++.
T Consensus 216 ~~la~~~g~~-~~~~~--~~~~~l~~aDvVi~at~~ 248 (311)
T cd05213 216 EELAKELGGN-AVPLD--ELLELLNEADVVISATGA 248 (311)
T ss_pred HHHHHHcCCe-EEeHH--HHHHHHhcCCEEEECCCC
Confidence 555778863 33221 222334568999999985
No 141
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.65 E-value=0.00031 Score=63.28 Aligned_cols=93 Identities=24% Similarity=0.409 Sum_probs=68.0
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCCEEeeCC-CCcccccCCCccEEEeCC---CC
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYT-KENIEDLPEKFDVVFDAV---GQ 224 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~-~~~~~~~~~~~dvvi~~~---g~ 224 (310)
++.+|+|+| +|.+|+.+++.++.+ |++|+++++++++++.+. .++........ .+.+.+....+|++|+|+ +.
T Consensus 166 ~~~~VlViG-aG~vG~~aa~~a~~l-Ga~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~ 243 (370)
T TIGR00518 166 EPGDVTIIG-GGVVGTNAAKMANGL-GATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGA 243 (370)
T ss_pred CCceEEEEc-CCHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCC
Confidence 345699999 799999999999996 999999999988887774 45543222111 122333345899999997 32
Q ss_pred ------hHHHHhhcccCCEEEEEeCC
Q 021628 225 ------CDKALKAVKEGGRVVSIIGS 244 (310)
Q Consensus 225 ------~~~~~~~l~~~G~~v~~g~~ 244 (310)
.+..++.+++++.++.++..
T Consensus 244 ~~p~lit~~~l~~mk~g~vIvDva~d 269 (370)
T TIGR00518 244 KAPKLVSNSLVAQMKPGAVIVDVAID 269 (370)
T ss_pred CCCcCcCHHHHhcCCCCCEEEEEecC
Confidence 27788899999999998643
No 142
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.60 E-value=0.0096 Score=51.74 Aligned_cols=233 Identities=13% Similarity=0.130 Sum_probs=123.4
Q ss_pred CCCcccccceeEEEEEeCCCCCCCCCCCeeEeecCcccc------------------CCCCCCCcceeEEEEecCccccC
Q 021628 59 PLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKAL------------------DHPKRNGSLAEYTAVEENLLALK 120 (310)
Q Consensus 59 ~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~~~~------------------~~~~~~g~~~~~~~~~~~~~~~i 120 (310)
.+..++-..+ ++|++ +.++++.+|+|++++.+.... ......-.|.+|.++..+..+.
T Consensus 29 ~wG~vPvWGf-A~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~- 104 (314)
T PF11017_consen 29 GWGIVPVWGF-ATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYD- 104 (314)
T ss_pred cCcccccceE-EEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccC-
Confidence 3444444444 67776 888999999999998652111 0111122444454444433331
Q ss_pred CCCCChhhhccccchHHHHHHHHH---hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcC-
Q 021628 121 PKNLSFVEAASLPLATETAYEGLE---RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG- 196 (310)
Q Consensus 121 p~~~~~~~aa~~~~~~~ta~~al~---~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g- 196 (310)
.+....++..-| -+.|.|..-. ....-..+.|+|+++++..++..+..++...+..-++...|+....+.+.+|
T Consensus 105 -~~~e~~~~LlrP-Lf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N~~Fve~lg~ 182 (314)
T PF11017_consen 105 -PEREDWQMLLRP-LFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARNVAFVESLGC 182 (314)
T ss_pred -cchhHHHHHHHH-HHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcchhhhhccCC
Confidence 112222222223 3456664322 1233445788999999999999888887222444444455556666888999
Q ss_pred CCEEeeCCCCcccccCCCccEEEeCCCC---hHHHHhhcccCC-EEEEEeCCCC---------CC-ceEEEEecC-----
Q 021628 197 ADLAIDYTKENIEDLPEKFDVVFDAVGQ---CDKALKAVKEGG-RVVSIIGSVT---------PP-ASSFVLTSD----- 257 (310)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~dvvi~~~g~---~~~~~~~l~~~G-~~v~~g~~~~---------~~-~~~~~~~~~----- 257 (310)
.|.++.+++-+... ....-+++|.+|+ ...+.+++...= ..+.+|.... +. ...+.....
T Consensus 183 Yd~V~~Yd~i~~l~-~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~~~~l~g~~~~~FFAp~~~~kr 261 (314)
T PF11017_consen 183 YDEVLTYDDIDSLD-APQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHWDKVEAPADLPGPRPEFFFAPDQIDKR 261 (314)
T ss_pred ceEEeehhhhhhcc-CCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCccccCccccCCCCCcEEEeChHHHHHH
Confidence 67888775432111 2345688899985 244445554432 3444553221 00 111111110
Q ss_pred ------HHH---HHHH-HHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCC
Q 021628 258 ------GSI---LEKL-NPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRA 300 (310)
Q Consensus 258 ------~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 300 (310)
.+. +.+. .+++.. ...+. .....-..+.+.++++.+.+++.
T Consensus 262 ~~~~G~~~~~~r~~~aw~~f~~~-~~~wl-~~~~~~G~ea~~~~y~~l~~G~v 312 (314)
T PF11017_consen 262 IKEWGAAEFFQRMAAAWKRFAAD-AQPWL-KVEEVAGPEAVEAAYQDLLAGKV 312 (314)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHh-hcCcE-EEEEecCHHHHHHHHHHHhcCCC
Confidence 011 1112 222222 22222 22467799999999999988764
No 143
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.48 E-value=0.00099 Score=61.09 Aligned_cols=90 Identities=24% Similarity=0.276 Sum_probs=70.2
Q ss_pred ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC--
Q 021628 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-- 224 (310)
Q Consensus 147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-- 224 (310)
..-.|++|+|.| .|.+|...++.++.. |++|+++.+++.+...+...|... . ++.+..+.+|+|+.+.|.
T Consensus 250 ~~LaGKtVgVIG-~G~IGr~vA~rL~a~-Ga~ViV~e~dp~~a~~A~~~G~~~-~-----~leell~~ADIVI~atGt~~ 321 (476)
T PTZ00075 250 VMIAGKTVVVCG-YGDVGKGCAQALRGF-GARVVVTEIDPICALQAAMEGYQV-V-----TLEDVVETADIFVTATGNKD 321 (476)
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchhHHHHHhcCcee-c-----cHHHHHhcCCEEEECCCccc
Confidence 345799999999 999999999999995 999999988877765554456432 1 223345689999999884
Q ss_pred -h-HHHHhhcccCCEEEEEeCC
Q 021628 225 -C-DKALKAVKEGGRVVSIIGS 244 (310)
Q Consensus 225 -~-~~~~~~l~~~G~~v~~g~~ 244 (310)
+ .+.++.|++++.++.+|..
T Consensus 322 iI~~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 322 IITLEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred ccCHHHHhccCCCcEEEEcCCC
Confidence 2 5889999999999999764
No 144
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.42 E-value=0.00031 Score=53.77 Aligned_cols=91 Identities=24% Similarity=0.376 Sum_probs=59.0
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHH-HHcCCC--EEeeCCCCcccccCCCccEEEeCCCC
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLL-RSLGAD--LAIDYTKENIEDLPEKFDVVFDAVGQ 224 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~-~~~g~~--~~~~~~~~~~~~~~~~~dvvi~~~g~ 224 (310)
-.+.+++|+| +|++|.+++..+... |++ ++++.|+.+|.+.+ ++++.. .+...+ +.......+|+||+|++.
T Consensus 10 l~~~~vlviG-aGg~ar~v~~~L~~~-g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~--~~~~~~~~~DivI~aT~~ 85 (135)
T PF01488_consen 10 LKGKRVLVIG-AGGAARAVAAALAAL-GAKEITIVNRTPERAEALAEEFGGVNIEAIPLE--DLEEALQEADIVINATPS 85 (135)
T ss_dssp GTTSEEEEES-SSHHHHHHHHHHHHT-TSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG--GHCHHHHTESEEEE-SST
T ss_pred cCCCEEEEEC-CHHHHHHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHcCccccceeeHH--HHHHHHhhCCeEEEecCC
Confidence 3688999999 899999999988886 875 88999999988777 456322 122222 222233579999999873
Q ss_pred h-----HHHHhhcccC-CEEEEEeC
Q 021628 225 C-----DKALKAVKEG-GRVVSIIG 243 (310)
Q Consensus 225 ~-----~~~~~~l~~~-G~~v~~g~ 243 (310)
. +..+....+. +.++.++.
T Consensus 86 ~~~~i~~~~~~~~~~~~~~v~Dla~ 110 (135)
T PF01488_consen 86 GMPIITEEMLKKASKKLRLVIDLAV 110 (135)
T ss_dssp TSTSSTHHHHTTTCHHCSEEEES-S
T ss_pred CCcccCHHHHHHHHhhhhceecccc
Confidence 2 3344333322 46666654
No 145
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.38 E-value=0.00029 Score=67.29 Aligned_cols=76 Identities=26% Similarity=0.463 Sum_probs=57.6
Q ss_pred ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC---------------------hhhHHHHHHcCCCEEeeCCC
Q 021628 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS---------------------TAKLDLLRSLGADLAIDYTK 205 (310)
Q Consensus 147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~---------------------~~~~~~~~~~g~~~~~~~~~ 205 (310)
..++|++|+|.| +|+.|++++..++.. |++|++++.. +.+++.++++|++..++...
T Consensus 133 ~~~~g~~V~VIG-aGpaGL~aA~~l~~~-G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~ 210 (564)
T PRK12771 133 APDTGKRVAVIG-GGPAGLSAAYHLRRM-GHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV 210 (564)
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 467899999999 999999999999985 9999888742 34667778899876665432
Q ss_pred -Cc--ccccCCCccEEEeCCCC
Q 021628 206 -EN--IEDLPEKFDVVFDAVGQ 224 (310)
Q Consensus 206 -~~--~~~~~~~~dvvi~~~g~ 224 (310)
.+ ......++|+||+++|+
T Consensus 211 ~~~~~~~~~~~~~D~Vi~AtG~ 232 (564)
T PRK12771 211 GEDITLEQLEGEFDAVFVAIGA 232 (564)
T ss_pred CCcCCHHHHHhhCCEEEEeeCC
Confidence 22 22223479999999984
No 146
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.37 E-value=0.0011 Score=57.60 Aligned_cols=91 Identities=18% Similarity=0.334 Sum_probs=68.6
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC---hH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---CD 226 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---~~ 226 (310)
.|++++|+| .|.+|.+.+..++.. |++|++..+++++.+.+.+.+...+ .. .++.+...++|+||++++. ..
T Consensus 150 ~gk~v~IiG-~G~iG~avA~~L~~~-G~~V~v~~R~~~~~~~~~~~g~~~~-~~--~~l~~~l~~aDiVint~P~~ii~~ 224 (287)
T TIGR02853 150 HGSNVMVLG-FGRTGMTIARTFSAL-GARVFVGARSSADLARITEMGLIPF-PL--NKLEEKVAEIDIVINTIPALVLTA 224 (287)
T ss_pred CCCEEEEEc-ChHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHCCCeee-cH--HHHHHHhccCCEEEECCChHHhCH
Confidence 478999999 899999999999985 9999999999888777766664321 11 1223344689999999873 25
Q ss_pred HHHhhcccCCEEEEEeCCC
Q 021628 227 KALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 227 ~~~~~l~~~G~~v~~g~~~ 245 (310)
..++.++++..++.++..+
T Consensus 225 ~~l~~~k~~aliIDlas~P 243 (287)
T TIGR02853 225 DVLSKLPKHAVIIDLASKP 243 (287)
T ss_pred HHHhcCCCCeEEEEeCcCC
Confidence 6778888888888886533
No 147
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.35 E-value=0.0004 Score=63.83 Aligned_cols=149 Identities=19% Similarity=0.248 Sum_probs=91.4
Q ss_pred cccccceeEEEEEeCCCCCCCCCCCeeEee-c-------CccccCCCCCCCcceeEEEEecCccccCCCCCChhhhcccc
Q 021628 62 TIPGYDVAGVVEKVGSQVKKFKVGDEVYGD-I-------NEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLP 133 (310)
Q Consensus 62 ~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~-~-------~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~ 133 (310)
..-|||+++.+.+|+++.++.-+|+.=++- . ...+.-+....+.|+. .+++|+.+..+.+...
T Consensus 90 ~~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~--------a~~~~k~v~~~t~i~~- 160 (423)
T PRK00045 90 VHEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQK--------AFSVAKRVRTETGIGA- 160 (423)
T ss_pred hcCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHH--------HHHHHhhHhhhcCCCC-
Confidence 346999999999999999886666653310 0 0000011111233333 2344554443333222
Q ss_pred chHHHHHHHHHhcc----cCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHH-HHHHcCCCEEeeCCCCc
Q 021628 134 LATETAYEGLERSA----FSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLD-LLRSLGADLAIDYTKEN 207 (310)
Q Consensus 134 ~~~~ta~~al~~~~----~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~-~~~~~g~~~~~~~~~~~ 207 (310)
.+.+.++.+++.+. ..++++|+|+| +|.+|.+++..++.. |. +++++.+++++.. +++++|.+ ++.. .+
T Consensus 161 ~~~Sv~~~Av~~a~~~~~~~~~~~vlViG-aG~iG~~~a~~L~~~-G~~~V~v~~r~~~ra~~la~~~g~~-~~~~--~~ 235 (423)
T PRK00045 161 GAVSVASAAVELAKQIFGDLSGKKVLVIG-AGEMGELVAKHLAEK-GVRKITVANRTLERAEELAEEFGGE-AIPL--DE 235 (423)
T ss_pred CCcCHHHHHHHHHHHhhCCccCCEEEEEC-chHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHcCCc-EeeH--HH
Confidence 12334666774332 35789999999 899999999988885 86 7888899988865 55677753 2222 12
Q ss_pred ccccCCCccEEEeCCCC
Q 021628 208 IEDLPEKFDVVFDAVGQ 224 (310)
Q Consensus 208 ~~~~~~~~dvvi~~~g~ 224 (310)
......++|+||+|+|+
T Consensus 236 ~~~~l~~aDvVI~aT~s 252 (423)
T PRK00045 236 LPEALAEADIVISSTGA 252 (423)
T ss_pred HHHHhccCCEEEECCCC
Confidence 22334579999999874
No 148
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.29 E-value=0.0013 Score=52.99 Aligned_cols=108 Identities=20% Similarity=0.258 Sum_probs=77.1
Q ss_pred cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC---
Q 021628 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--- 224 (310)
Q Consensus 148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~--- 224 (310)
--.|.+|.|+| .|.+|...++.++.. |.+|++.+++........+.+... .++.+....+|+|+.+.+.
T Consensus 33 ~l~g~tvgIiG-~G~IG~~vA~~l~~f-G~~V~~~d~~~~~~~~~~~~~~~~------~~l~ell~~aDiv~~~~plt~~ 104 (178)
T PF02826_consen 33 ELRGKTVGIIG-YGRIGRAVARRLKAF-GMRVIGYDRSPKPEEGADEFGVEY------VSLDELLAQADIVSLHLPLTPE 104 (178)
T ss_dssp -STTSEEEEES-TSHHHHHHHHHHHHT-T-EEEEEESSCHHHHHHHHTTEEE------SSHHHHHHH-SEEEE-SSSSTT
T ss_pred ccCCCEEEEEE-EcCCcCeEeeeeecC-CceeEEecccCChhhhccccccee------eehhhhcchhhhhhhhhccccc
Confidence 34689999999 999999999999995 999999999887766444444311 1334444578999988761
Q ss_pred ---h--HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCeeE
Q 021628 225 ---C--DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKA 275 (310)
Q Consensus 225 ---~--~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (310)
+ ...++.|+++..+|.++. ..--+-+++++.+++|++.-
T Consensus 105 T~~li~~~~l~~mk~ga~lvN~aR------------G~~vde~aL~~aL~~g~i~g 148 (178)
T PF02826_consen 105 TRGLINAEFLAKMKPGAVLVNVAR------------GELVDEDALLDALESGKIAG 148 (178)
T ss_dssp TTTSBSHHHHHTSTTTEEEEESSS------------GGGB-HHHHHHHHHTTSEEE
T ss_pred cceeeeeeeeeccccceEEEeccc------------hhhhhhhHHHHHHhhccCce
Confidence 1 688999999999998862 11123567889999999983
No 149
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.27 E-value=0.0025 Score=54.84 Aligned_cols=96 Identities=28% Similarity=0.483 Sum_probs=59.7
Q ss_pred HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCEEeeCCCCcccccCCCccEE
Q 021628 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLAIDYTKENIEDLPEKFDVV 218 (310)
Q Consensus 143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~dvv 218 (310)
++.+++++|++||-+| +| -|-.+..+++. +|++|+.+..++++.+.++ +.|....+.....++.+....+|.|
T Consensus 55 ~~~~~l~~G~~vLDiG-cG-wG~~~~~~a~~-~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~~~~~~~fD~I 131 (273)
T PF02353_consen 55 CEKLGLKPGDRVLDIG-CG-WGGLAIYAAER-YGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDYRDLPGKFDRI 131 (273)
T ss_dssp HTTTT--TT-EEEEES--T-TSHHHHHHHHH-H--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-GGG---S-SEE
T ss_pred HHHhCCCCCCEEEEeC-CC-ccHHHHHHHHH-cCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeeccccCCCCCEE
Confidence 3678999999999999 55 78889999998 5999999999999888774 3453211111112334445589988
Q ss_pred EeC-----CCC------hHHHHhhcccCCEEEEE
Q 021628 219 FDA-----VGQ------CDKALKAVKEGGRVVSI 241 (310)
Q Consensus 219 i~~-----~g~------~~~~~~~l~~~G~~v~~ 241 (310)
+.. +|. ++.+-+.|+|+|+++.-
T Consensus 132 vSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq 165 (273)
T PF02353_consen 132 VSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ 165 (273)
T ss_dssp EEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred EEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 654 331 36777899999999854
No 150
>PRK08324 short chain dehydrogenase; Validated
Probab=97.22 E-value=0.0014 Score=64.09 Aligned_cols=109 Identities=25% Similarity=0.294 Sum_probs=69.6
Q ss_pred CcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEe
Q 021628 104 GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT 183 (310)
Q Consensus 104 g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~ 183 (310)
.++++|..++...++.+ +.++.+++..... ...+..+|++++|+|++|.+|.+.++.+... |++|++++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~---------~~~~~l~gk~vLVTGasggIG~~la~~L~~~-Ga~Vvl~~ 453 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRM---------PKPKPLAGKVALVTGAAGGIGKATAKRLAAE-GACVVLAD 453 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhcC---------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHC-cCEEEEEe
Confidence 45666777776666666 5566666532110 0223346899999999999999999888875 99999999
Q ss_pred cChhhHHHHH-HcCC--C-EE--eeCCCCc-ccc-------cCCCccEEEeCCC
Q 021628 184 SSTAKLDLLR-SLGA--D-LA--IDYTKEN-IED-------LPEKFDVVFDAVG 223 (310)
Q Consensus 184 ~~~~~~~~~~-~~g~--~-~~--~~~~~~~-~~~-------~~~~~dvvi~~~g 223 (310)
+++++.+.+. +++. . .. .+..+++ ... ..+++|++|+++|
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG 507 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAG 507 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 9988776553 3432 1 11 2222211 111 1247899999987
No 151
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.18 E-value=0.0013 Score=54.46 Aligned_cols=73 Identities=25% Similarity=0.425 Sum_probs=53.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCC--CEEeeCCCCcccc----------cCCCcc
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGA--DLAIDYTKENIED----------LPEKFD 216 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~--~~~~~~~~~~~~~----------~~~~~d 216 (310)
.++.++|+|+++++|.+.++.+... |++|+.+.|..++++.+ .+++. -..+..+-.+..+ .-..+|
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~-G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEA-GAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID 83 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHC-CCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence 4578999999999999999988885 99999999999999888 45763 1222222112111 123689
Q ss_pred EEEeCCC
Q 021628 217 VVFDAVG 223 (310)
Q Consensus 217 vvi~~~g 223 (310)
+.++.+|
T Consensus 84 iLvNNAG 90 (246)
T COG4221 84 ILVNNAG 90 (246)
T ss_pred EEEecCC
Confidence 9999988
No 152
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.14 E-value=0.0012 Score=53.07 Aligned_cols=73 Identities=19% Similarity=0.400 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCC---EEeeCCCCc-ccc----c---CCCccEE
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD---LAIDYTKEN-IED----L---PEKFDVV 218 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~---~~~~~~~~~-~~~----~---~~~~dvv 218 (310)
-|.+|||+|+++++|++.++-...+ |-+||++-|++++++.+++..+. .+.+-.+.+ ..+ . -...+++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~el-gN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl 82 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLEL-GNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL 82 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHh-CCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence 3789999999999999988888876 88999999999999999765432 222222211 111 1 1257888
Q ss_pred EeCCC
Q 021628 219 FDAVG 223 (310)
Q Consensus 219 i~~~g 223 (310)
++++|
T Consensus 83 iNNAG 87 (245)
T COG3967 83 INNAG 87 (245)
T ss_pred eeccc
Confidence 88887
No 153
>PRK14967 putative methyltransferase; Provisional
Probab=97.11 E-value=0.028 Score=46.94 Aligned_cols=130 Identities=22% Similarity=0.257 Sum_probs=79.5
Q ss_pred HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCCE-EeeCCCCcccccCCCccE
Q 021628 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADL-AIDYTKENIEDLPEKFDV 217 (310)
Q Consensus 143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~~-~~~~~~~~~~~~~~~~dv 217 (310)
+....++++++|+-.| +|. |..+..+++. ...+++.++.+++..+.+++ .+... +++.+-... .....+|+
T Consensus 29 l~~~~~~~~~~vLDlG-cG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~-~~~~~fD~ 104 (223)
T PRK14967 29 LAAEGLGPGRRVLDLC-TGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA-VEFRPFDV 104 (223)
T ss_pred HHhcccCCCCeEEEec-CCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh-ccCCCeeE
Confidence 3445678899999999 666 8888888875 23488999999988776543 33322 222221111 12347999
Q ss_pred EEeCCC---C---------------------------hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHH
Q 021628 218 VFDAVG---Q---------------------------CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPY 267 (310)
Q Consensus 218 vi~~~g---~---------------------------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (310)
|+...+ . +..+.+.|+++|+++.+-... ....+++++
T Consensus 105 Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~~~~-------------~~~~~~~~~ 171 (223)
T PRK14967 105 VVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQSEL-------------SGVERTLTR 171 (223)
T ss_pred EEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEEecc-------------cCHHHHHHH
Confidence 987532 0 135678999999998653211 133456677
Q ss_pred HHcCCeeEEecCCcccchhhHH
Q 021628 268 FESGKVKAIIDPKGPFPFSQTL 289 (310)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~ 289 (310)
+.+..+.......+.+++....
T Consensus 172 l~~~g~~~~~~~~~~~~~~~~~ 193 (223)
T PRK14967 172 LSEAGLDAEVVASQWIPFGPVL 193 (223)
T ss_pred HHHCCCCeEEEEeeccCccHHH
Confidence 7766655444444556665533
No 154
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.09 E-value=0.016 Score=47.38 Aligned_cols=115 Identities=21% Similarity=0.279 Sum_probs=77.1
Q ss_pred HhcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHH----HcC-CCE--EeeCCCCc-ccccCCC
Q 021628 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR----SLG-ADL--AIDYTKEN-IEDLPEK 214 (310)
Q Consensus 144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~----~~g-~~~--~~~~~~~~-~~~~~~~ 214 (310)
....+.++++|+-+| +|. |..++.+++.+. +.+++.++.+++..+.++ .++ .+. ++..+..+ .......
T Consensus 34 ~~l~~~~~~~vlDlG-~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~ 111 (198)
T PRK00377 34 SKLRLRKGDMILDIG-CGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEK 111 (198)
T ss_pred HHcCCCCcCEEEEeC-CcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCCC
Confidence 567888999999999 777 999999888642 357999999999887664 355 222 22222211 1122357
Q ss_pred ccEEEeCCC--C----hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCe
Q 021628 215 FDVVFDAVG--Q----CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKV 273 (310)
Q Consensus 215 ~dvvi~~~g--~----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (310)
+|.||...+ . ++.+.+.|+|+|+++... ...+.+..+.+.+++..+
T Consensus 112 ~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~-------------~~~~~~~~~~~~l~~~g~ 163 (198)
T PRK00377 112 FDRIFIGGGSEKLKEIISASWEIIKKGGRIVIDA-------------ILLETVNNALSALENIGF 163 (198)
T ss_pred CCEEEECCCcccHHHHHHHHHHHcCCCcEEEEEe-------------ecHHHHHHHHHHHHHcCC
Confidence 999998654 2 367788999999998542 233556677777765444
No 155
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=96.99 E-value=0.0034 Score=53.36 Aligned_cols=75 Identities=23% Similarity=0.365 Sum_probs=51.5
Q ss_pred cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcC----CC-EEe--eCCCC-cccc-------c
Q 021628 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLG----AD-LAI--DYTKE-NIED-------L 211 (310)
Q Consensus 148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g----~~-~~~--~~~~~-~~~~-------~ 211 (310)
...+.+++|+|+++++|...+..+.. +|.+++.+.|+++|++.+. ++. .. .++ |..+. +... .
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~-~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLAR-RGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence 35678999999999999986666555 3999999999999998873 333 11 232 22221 1111 1
Q ss_pred CCCccEEEeCCC
Q 021628 212 PEKFDVVFDAVG 223 (310)
Q Consensus 212 ~~~~dvvi~~~g 223 (310)
...+|+.++++|
T Consensus 82 ~~~IdvLVNNAG 93 (265)
T COG0300 82 GGPIDVLVNNAG 93 (265)
T ss_pred CCcccEEEECCC
Confidence 126899999987
No 156
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=96.98 E-value=0.018 Score=50.07 Aligned_cols=108 Identities=17% Similarity=0.104 Sum_probs=69.4
Q ss_pred cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc----CCC-EEeeCCCCcccccCCCccEEEeCC
Q 021628 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GAD-LAIDYTKENIEDLPEKFDVVFDAV 222 (310)
Q Consensus 148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~dvvi~~~ 222 (310)
.+++++|+-.| +|. |.+++.+++. +..+++.++.++...+.+++. +.. .+..............+|+|+...
T Consensus 157 ~~~g~~VLDvG-cGs-G~lai~aa~~-g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~~~~~~~~~fDlVvan~ 233 (288)
T TIGR00406 157 DLKDKNVIDVG-CGS-GILSIAALKL-GAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIYLEQPIEGKADVIVANI 233 (288)
T ss_pred cCCCCEEEEeC-CCh-hHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecccccccCCCceEEEEec
Confidence 46789999999 777 8888877764 345899999998887776542 221 111111101111235799998764
Q ss_pred C-C-----hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcC
Q 021628 223 G-Q-----CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESG 271 (310)
Q Consensus 223 g-~-----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (310)
. . +..+.+.|+|+|.++..|. ......++.+.+.++
T Consensus 234 ~~~~l~~ll~~~~~~LkpgG~li~sgi-------------~~~~~~~v~~~~~~~ 275 (288)
T TIGR00406 234 LAEVIKELYPQFSRLVKPGGWLILSGI-------------LETQAQSVCDAYEQG 275 (288)
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEeC-------------cHhHHHHHHHHHHcc
Confidence 3 1 2567899999999987762 234456666666665
No 157
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=96.96 E-value=0.015 Score=46.42 Aligned_cols=115 Identities=20% Similarity=0.223 Sum_probs=77.5
Q ss_pred HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCE--EeeCCCCcccccCCCccE
Q 021628 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL--AIDYTKENIEDLPEKFDV 217 (310)
Q Consensus 144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~~~~~~~dv 217 (310)
...++++|+.++=.|+ +.|..+++++..-...+++++++++++.+..+ +||.+. ++..+.+..-.....+|.
T Consensus 28 s~L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~~~da 105 (187)
T COG2242 28 SKLRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLPSPDA 105 (187)
T ss_pred HhhCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCCCCCE
Confidence 4678899998877773 34666777775433569999999999988774 588663 344433322111226888
Q ss_pred EEeCCC-C----hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCe
Q 021628 218 VFDAVG-Q----CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKV 273 (310)
Q Consensus 218 vi~~~g-~----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (310)
+|---| + ++.+|..|+++||+|.-. ..-+....+++.+++...
T Consensus 106 iFIGGg~~i~~ile~~~~~l~~ggrlV~na-------------itlE~~~~a~~~~~~~g~ 153 (187)
T COG2242 106 IFIGGGGNIEEILEAAWERLKPGGRLVANA-------------ITLETLAKALEALEQLGG 153 (187)
T ss_pred EEECCCCCHHHHHHHHHHHcCcCCeEEEEe-------------ecHHHHHHHHHHHHHcCC
Confidence 885533 3 489999999999998664 234556666677776555
No 158
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.95 E-value=0.0028 Score=54.29 Aligned_cols=93 Identities=29% Similarity=0.397 Sum_probs=71.0
Q ss_pred cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-cCCC-EEeeCCCCcccccCCCccEEEeCC---
Q 021628 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGAD-LAIDYTKENIEDLPEKFDVVFDAV--- 222 (310)
Q Consensus 148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~g~~-~~~~~~~~~~~~~~~~~dvvi~~~--- 222 (310)
+.++ +|.|+| .|.+|.-|+.+|..+ |++|++.+.|.+|++.+.. ++.+ .++-+....+.+....+|++|.++
T Consensus 166 V~~~-kv~iiG-GGvvgtnaAkiA~gl-gA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIp 242 (371)
T COG0686 166 VLPA-KVVVLG-GGVVGTNAAKIAIGL-GADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIP 242 (371)
T ss_pred CCCc-cEEEEC-CccccchHHHHHhcc-CCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEec
Confidence 3444 466777 799999999999997 9999999999999999966 4443 333333344555567899999875
Q ss_pred C------ChHHHHhhcccCCEEEEEeC
Q 021628 223 G------QCDKALKAVKEGGRVVSIIG 243 (310)
Q Consensus 223 g------~~~~~~~~l~~~G~~v~~g~ 243 (310)
| ..++.++.|.|++.++.+..
T Consensus 243 gakaPkLvt~e~vk~MkpGsVivDVAi 269 (371)
T COG0686 243 GAKAPKLVTREMVKQMKPGSVIVDVAI 269 (371)
T ss_pred CCCCceehhHHHHHhcCCCcEEEEEEE
Confidence 3 13888999999999998853
No 159
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.93 E-value=0.011 Score=48.63 Aligned_cols=100 Identities=25% Similarity=0.311 Sum_probs=64.1
Q ss_pred HHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC--cEEEEecChhhHHHH----HHcCCCEE--eeCCCCcccccC
Q 021628 141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLL----RSLGADLA--IDYTKENIEDLP 212 (310)
Q Consensus 141 ~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~--~vi~~~~~~~~~~~~----~~~g~~~~--~~~~~~~~~~~~ 212 (310)
.+++...++||++||-.| ++.|..++.+++.. |. +|+.+..+++-.+.+ +.++.+.+ +..+........
T Consensus 63 ~~l~~L~l~pg~~VLeIG--tGsGY~aAlla~lv-g~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~~~ 139 (209)
T PF01135_consen 63 RMLEALDLKPGDRVLEIG--TGSGYQAALLAHLV-GPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWPEE 139 (209)
T ss_dssp HHHHHTTC-TT-EEEEES---TTSHHHHHHHHHH-STTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTGGG
T ss_pred HHHHHHhcCCCCEEEEec--CCCcHHHHHHHHhc-CccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhccccC
Confidence 355777899999999998 56788888888876 54 577777777654444 44565422 222211111123
Q ss_pred CCccEEEeCCC--C-hHHHHhhcccCCEEEEEeC
Q 021628 213 EKFDVVFDAVG--Q-CDKALKAVKEGGRVVSIIG 243 (310)
Q Consensus 213 ~~~dvvi~~~g--~-~~~~~~~l~~~G~~v~~g~ 243 (310)
..+|.|+-+.+ . +...++.|++||+++..-.
T Consensus 140 apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~pi~ 173 (209)
T PF01135_consen 140 APFDRIIVTAAVPEIPEALLEQLKPGGRLVAPIG 173 (209)
T ss_dssp -SEEEEEESSBBSS--HHHHHTEEEEEEEEEEES
T ss_pred CCcCEEEEeeccchHHHHHHHhcCCCcEEEEEEc
Confidence 47999998766 2 4788899999999997543
No 160
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.91 E-value=0.01 Score=43.35 Aligned_cols=90 Identities=30% Similarity=0.419 Sum_probs=61.5
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-c---C--CCE-EeeCCCCcccccCCCccEEEeCC
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-L---G--ADL-AIDYTKENIEDLPEKFDVVFDAV 222 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~---g--~~~-~~~~~~~~~~~~~~~~dvvi~~~ 222 (310)
||++||-+| + +.|..+..+++...+.+++.++.+++..+.+++ . + ... ++..+-.........+|+|+...
T Consensus 1 p~~~vLDlG-c-G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~ 78 (112)
T PF12847_consen 1 PGGRVLDLG-C-GTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDAEFDPDFLEPFDLVICSG 78 (112)
T ss_dssp TTCEEEEET-T-TTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCCHGGTTTSSCEEEEEECS
T ss_pred CCCEEEEEc-C-cCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECccccCcccCCCCCEEEECC
Confidence 688999998 4 458888888884358899999999998888853 2 2 121 22222101122345799999876
Q ss_pred -C-C-----------hHHHHhhcccCCEEEEE
Q 021628 223 -G-Q-----------CDKALKAVKEGGRVVSI 241 (310)
Q Consensus 223 -g-~-----------~~~~~~~l~~~G~~v~~ 241 (310)
. . ++...+.|+|+|+++..
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 79 FTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp GSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 2 1 36788899999999853
No 161
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.91 E-value=0.0088 Score=50.16 Aligned_cols=42 Identities=26% Similarity=0.411 Sum_probs=37.1
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+++|+|+|++|.+|..+++.+... |++|+.+++++++.+.+
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~-G~~V~~~~r~~~~~~~~ 45 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKE-GAQVCINSRNENKLKRM 45 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 4689999999999999999998885 99999999988877665
No 162
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.79 E-value=0.022 Score=50.16 Aligned_cols=97 Identities=25% Similarity=0.311 Sum_probs=66.4
Q ss_pred HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC--cEEEEecChhhHHHHH----HcCCCEEe--eCCCCcccccCC
Q 021628 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLR----SLGADLAI--DYTKENIEDLPE 213 (310)
Q Consensus 142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~--~vi~~~~~~~~~~~~~----~~g~~~~~--~~~~~~~~~~~~ 213 (310)
.++...++++++||.+| +| .|..++.+++.. +. .|+.++.+++..+.++ +.|.+.+. ..+.........
T Consensus 72 ll~~L~i~~g~~VLDIG-~G-tG~~a~~LA~~~-~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~~~~~ 148 (322)
T PRK13943 72 FMEWVGLDKGMRVLEIG-GG-TGYNAAVMSRVV-GEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCGDGYYGVPEFA 148 (322)
T ss_pred HHHhcCCCCCCEEEEEe-CC-ccHHHHHHHHhc-CCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCChhhcccccC
Confidence 34566788999999999 65 599999999874 53 5888888988766553 35654322 221111111124
Q ss_pred CccEEEeCCCC---hHHHHhhcccCCEEEEE
Q 021628 214 KFDVVFDAVGQ---CDKALKAVKEGGRVVSI 241 (310)
Q Consensus 214 ~~dvvi~~~g~---~~~~~~~l~~~G~~v~~ 241 (310)
.+|+|+.+.+. ....++.|+++|+++..
T Consensus 149 ~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 149 PYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred CccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 69999988772 36778999999998864
No 163
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.73 E-value=0.015 Score=45.55 Aligned_cols=90 Identities=19% Similarity=0.300 Sum_probs=60.6
Q ss_pred ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC--
Q 021628 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-- 224 (310)
Q Consensus 147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-- 224 (310)
..-.|.+++|.| -|.+|...++.++.+ |++|++++.++-+.-.+.--|... . ...+.....|++|.++|.
T Consensus 19 ~~l~Gk~vvV~G-YG~vG~g~A~~lr~~-Ga~V~V~e~DPi~alqA~~dGf~v-~-----~~~~a~~~adi~vtaTG~~~ 90 (162)
T PF00670_consen 19 LMLAGKRVVVIG-YGKVGKGIARALRGL-GARVTVTEIDPIRALQAAMDGFEV-M-----TLEEALRDADIFVTATGNKD 90 (162)
T ss_dssp S--TTSEEEEE---SHHHHHHHHHHHHT-T-EEEEE-SSHHHHHHHHHTT-EE-E------HHHHTTT-SEEEE-SSSSS
T ss_pred eeeCCCEEEEeC-CCcccHHHHHHHhhC-CCEEEEEECChHHHHHhhhcCcEe-c-----CHHHHHhhCCEEEECCCCcc
Confidence 456799999999 999999999999996 999999999998876665555432 1 123345678999999984
Q ss_pred --hHHHHhhcccCCEEEEEeCC
Q 021628 225 --CDKALKAVKEGGRVVSIIGS 244 (310)
Q Consensus 225 --~~~~~~~l~~~G~~v~~g~~ 244 (310)
..+-++.|+++..+...|..
T Consensus 91 vi~~e~~~~mkdgail~n~Gh~ 112 (162)
T PF00670_consen 91 VITGEHFRQMKDGAILANAGHF 112 (162)
T ss_dssp SB-HHHHHHS-TTEEEEESSSS
T ss_pred ccCHHHHHHhcCCeEEeccCcC
Confidence 25778888877777666643
No 164
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.73 E-value=0.046 Score=40.58 Aligned_cols=97 Identities=22% Similarity=0.344 Sum_probs=65.3
Q ss_pred HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCC--EEeeCCCCc-ccccCCCcc
Q 021628 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD--LAIDYTKEN-IEDLPEKFD 216 (310)
Q Consensus 144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~--~~~~~~~~~-~~~~~~~~d 216 (310)
....+.++++|+-+| +|. |..+..+++...+.+++.++.++...+.++ +++.. .++..+... .......+|
T Consensus 13 ~~~~~~~~~~vldlG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 90 (124)
T TIGR02469 13 SKLRLRPGDVLWDIG-AGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPD 90 (124)
T ss_pred HHcCCCCCCEEEEeC-CCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCC
Confidence 445667788999999 655 999999998743468899999988877764 33332 222222111 112235799
Q ss_pred EEEeCCC--C----hHHHHhhcccCCEEEEEe
Q 021628 217 VVFDAVG--Q----CDKALKAVKEGGRVVSII 242 (310)
Q Consensus 217 vvi~~~g--~----~~~~~~~l~~~G~~v~~g 242 (310)
+|+...+ . ++.+.+.|+++|+++...
T Consensus 91 ~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 91 RVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred EEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 9987643 2 478889999999998653
No 165
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.67 E-value=0.014 Score=53.62 Aligned_cols=148 Identities=19% Similarity=0.258 Sum_probs=92.3
Q ss_pred cccccceeEEEEEeCCCCCCCCCCCeeEee--------cCccccCCCCCCCcceeEEEEecCcccc---C-CCCCChhhh
Q 021628 62 TIPGYDVAGVVEKVGSQVKKFKVGDEVYGD--------INEKALDHPKRNGSLAEYTAVEENLLAL---K-PKNLSFVEA 129 (310)
Q Consensus 62 ~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~~---i-p~~~~~~~a 129 (310)
..-|.++++.+.+|+++.++.-+|+.-++- ....+.-+....+.|++++.++. .+.. | +..++...+
T Consensus 88 ~~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~ 166 (417)
T TIGR01035 88 ILTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISSA 166 (417)
T ss_pred hcCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHHH
Confidence 346889999999999998876666654310 00122223334567888776655 2222 2 222222221
Q ss_pred ccccchHHHHH-HHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHH-HHHHcCCCEEeeCCCC
Q 021628 130 ASLPLATETAY-EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLD-LLRSLGADLAIDYTKE 206 (310)
Q Consensus 130 a~~~~~~~ta~-~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~-~~~~~g~~~~~~~~~~ 206 (310)
|. .+.+.....++++|+|+| +|.+|.++++.++.. | .+++++.++.++.. .+++++... +.. +
T Consensus 167 ---------Av~la~~~~~~l~~~~VlViG-aG~iG~~~a~~L~~~-G~~~V~v~~rs~~ra~~la~~~g~~~-i~~--~ 232 (417)
T TIGR01035 167 ---------AVELAERIFGSLKGKKALLIG-AGEMGELVAKHLLRK-GVGKILIANRTYERAEDLAKELGGEA-VKF--E 232 (417)
T ss_pred ---------HHHHHHHHhCCccCCEEEEEC-ChHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHcCCeE-eeH--H
Confidence 11 112333446789999999 799999999998885 7 67889999888755 556677532 222 1
Q ss_pred cccccCCCccEEEeCCCC
Q 021628 207 NIEDLPEKFDVVFDAVGQ 224 (310)
Q Consensus 207 ~~~~~~~~~dvvi~~~g~ 224 (310)
+..+...++|+||+|+++
T Consensus 233 ~l~~~l~~aDvVi~aT~s 250 (417)
T TIGR01035 233 DLEEYLAEADIVISSTGA 250 (417)
T ss_pred HHHHHHhhCCEEEECCCC
Confidence 223334589999999874
No 166
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.64 E-value=0.069 Score=44.22 Aligned_cols=98 Identities=19% Similarity=0.223 Sum_probs=65.1
Q ss_pred HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcC--CcEEEEecChhhHHHHHH----cCCCE--EeeCCCCcccccCC
Q 021628 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRS----LGADL--AIDYTKENIEDLPE 213 (310)
Q Consensus 142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g--~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~ 213 (310)
.+....++++++||-.| .+.|..+..+++.. + .+|+.++.+++-.+.+++ .+... ++..+.........
T Consensus 68 ~~~~l~~~~g~~VLdIG--~GsG~~t~~la~~~-~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~~~~~ 144 (212)
T PRK13942 68 MCELLDLKEGMKVLEIG--TGSGYHAAVVAEIV-GKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGYEENA 144 (212)
T ss_pred HHHHcCCCCcCEEEEEC--CcccHHHHHHHHhc-CCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCcCC
Confidence 34567789999999998 45677777777764 4 588999999887766643 44322 22222111111234
Q ss_pred CccEEEeCCC--C-hHHHHhhcccCCEEEEEe
Q 021628 214 KFDVVFDAVG--Q-CDKALKAVKEGGRVVSII 242 (310)
Q Consensus 214 ~~dvvi~~~g--~-~~~~~~~l~~~G~~v~~g 242 (310)
.+|+|+-... . ....++.|+++|+++..-
T Consensus 145 ~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~~ 176 (212)
T PRK13942 145 PYDRIYVTAAGPDIPKPLIEQLKDGGIMVIPV 176 (212)
T ss_pred CcCEEEECCCcccchHHHHHhhCCCcEEEEEE
Confidence 7999876543 2 367889999999998753
No 167
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=96.62 E-value=0.012 Score=53.21 Aligned_cols=96 Identities=24% Similarity=0.368 Sum_probs=66.9
Q ss_pred HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeC--
Q 021628 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDA-- 221 (310)
Q Consensus 144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~-- 221 (310)
+...+++|++||-+| + +.|..+..+++.. +++|+.++.+++..+.+++......++....+.....+.+|.|+..
T Consensus 161 ~~l~l~~g~rVLDIG-c-G~G~~a~~la~~~-g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~~~l~~~fD~Ivs~~~ 237 (383)
T PRK11705 161 RKLQLKPGMRVLDIG-C-GWGGLARYAAEHY-GVSVVGVTISAEQQKLAQERCAGLPVEIRLQDYRDLNGQFDRIVSVGM 237 (383)
T ss_pred HHhCCCCCCEEEEeC-C-CccHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhccCeEEEEECchhhcCCCCCEEEEeCc
Confidence 567789999999999 5 5788888888874 8999999999999998865432111111111222223568988754
Q ss_pred ---CCC------hHHHHhhcccCCEEEEEe
Q 021628 222 ---VGQ------CDKALKAVKEGGRVVSII 242 (310)
Q Consensus 222 ---~g~------~~~~~~~l~~~G~~v~~g 242 (310)
+|. ++.+.+.|+|+|+++...
T Consensus 238 ~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 238 FEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred hhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 231 367778999999998764
No 168
>PRK12742 oxidoreductase; Provisional
Probab=96.57 E-value=0.019 Score=48.01 Aligned_cols=73 Identities=25% Similarity=0.403 Sum_probs=47.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHH-HHcCCCEE-eeCCCCc-cc---ccCCCccEEEeCC
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL-RSLGADLA-IDYTKEN-IE---DLPEKFDVVFDAV 222 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~-~~~g~~~~-~~~~~~~-~~---~~~~~~dvvi~~~ 222 (310)
.+++++|+|++|.+|...++.+... |++++++.+ ++++.+.+ ++++...+ .+..+.. .. .....+|++|+++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~a 83 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTD-GANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNA 83 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence 4789999999999999988887774 998887755 55555544 44554322 2221111 11 1123589999987
Q ss_pred C
Q 021628 223 G 223 (310)
Q Consensus 223 g 223 (310)
|
T Consensus 84 g 84 (237)
T PRK12742 84 G 84 (237)
T ss_pred C
Confidence 6
No 169
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.47 E-value=0.034 Score=46.58 Aligned_cols=99 Identities=25% Similarity=0.306 Sum_probs=72.6
Q ss_pred HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC--EEeeCCCCcccccCCCccE
Q 021628 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKFDV 217 (310)
Q Consensus 144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~dv 217 (310)
.....++|++||=.+ ++.|-.|..+++.....+|++++-+++-++.+++ .+.. ..+..+.+.+....+.||+
T Consensus 45 ~~~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LPf~D~sFD~ 122 (238)
T COG2226 45 SLLGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLPFPDNSFDA 122 (238)
T ss_pred HhhCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCCCCCCccCE
Confidence 345666899998875 7789999999998644689999999999888854 2222 1233444444444568999
Q ss_pred EEeCCC-----C----hHHHHhhcccCCEEEEEeCC
Q 021628 218 VFDAVG-----Q----CDKALKAVKEGGRVVSIIGS 244 (310)
Q Consensus 218 vi~~~g-----~----~~~~~~~l~~~G~~v~~g~~ 244 (310)
|..+.| + +++..+.|+|+|+++.....
T Consensus 123 vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~ 158 (238)
T COG2226 123 VTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFS 158 (238)
T ss_pred EEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcC
Confidence 988877 1 47899999999999888643
No 170
>PRK07574 formate dehydrogenase; Provisional
Probab=96.38 E-value=0.03 Score=50.62 Aligned_cols=86 Identities=21% Similarity=0.271 Sum_probs=63.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCCh----
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC---- 225 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~---- 225 (310)
.|.+|.|+| .|.+|...++.++. +|.+|++.+++....+..+.++.... .++.+....+|+|+.+.+..
T Consensus 191 ~gktVGIvG-~G~IG~~vA~~l~~-fG~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~ell~~aDvV~l~lPlt~~T~ 263 (385)
T PRK07574 191 EGMTVGIVG-AGRIGLAVLRRLKP-FDVKLHYTDRHRLPEEVEQELGLTYH-----VSFDSLVSVCDVVTIHCPLHPETE 263 (385)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHh-CCCEEEEECCCCCchhhHhhcCceec-----CCHHHHhhcCCEEEEcCCCCHHHH
Confidence 567999999 99999999999998 49999999987644444444543211 13445556889999888621
Q ss_pred ----HHHHhhcccCCEEEEEe
Q 021628 226 ----DKALKAVKEGGRVVSII 242 (310)
Q Consensus 226 ----~~~~~~l~~~G~~v~~g 242 (310)
...+..|+++..+|.++
T Consensus 264 ~li~~~~l~~mk~ga~lIN~a 284 (385)
T PRK07574 264 HLFDADVLSRMKRGSYLVNTA 284 (385)
T ss_pred HHhCHHHHhcCCCCcEEEECC
Confidence 56788999999888886
No 171
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.38 E-value=0.078 Score=45.50 Aligned_cols=98 Identities=26% Similarity=0.432 Sum_probs=68.9
Q ss_pred HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCCEEeeCCCCcccccCCCccEEE
Q 021628 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKENIEDLPEKFDVVF 219 (310)
Q Consensus 144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~dvvi 219 (310)
+..+++||++||=+| +| =|.+++-.|+. +|.+|+.++.|+++.+.+++ .|...-+...-.+..+..+.||-|+
T Consensus 66 ~kl~L~~G~~lLDiG-CG-WG~l~~~aA~~-y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd~~e~fDrIv 142 (283)
T COG2230 66 EKLGLKPGMTLLDIG-CG-WGGLAIYAAEE-YGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRDFEEPFDRIV 142 (283)
T ss_pred HhcCCCCCCEEEEeC-CC-hhHHHHHHHHH-cCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccccccccceee
Confidence 689999999999998 44 47788888888 59999999999998877754 4532111111122333344588776
Q ss_pred e-----CCCC------hHHHHhhcccCCEEEEEeCC
Q 021628 220 D-----AVGQ------CDKALKAVKEGGRVVSIIGS 244 (310)
Q Consensus 220 ~-----~~g~------~~~~~~~l~~~G~~v~~g~~ 244 (310)
. .+|. +..+-++|+++|++......
T Consensus 143 SvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~ 178 (283)
T COG2230 143 SVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSIT 178 (283)
T ss_pred ehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEec
Confidence 3 3442 37888999999999987643
No 172
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.014 Score=50.91 Aligned_cols=73 Identities=29% Similarity=0.393 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCC--CE-E--eeCCCCc-cc-------ccCCCc
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGA--DL-A--IDYTKEN-IE-------DLPEKF 215 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~--~~-~--~~~~~~~-~~-------~~~~~~ 215 (310)
.|.+++|+|++|++|.+.++.+... |++|+++.+++++++.+ ++++. .. . .|..+.+ .. .....+
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHAR-GAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI 86 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999888774 99999999998887665 44542 11 1 2222111 10 012468
Q ss_pred cEEEeCCC
Q 021628 216 DVVFDAVG 223 (310)
Q Consensus 216 dvvi~~~g 223 (310)
|++|+++|
T Consensus 87 d~vI~nAG 94 (296)
T PRK05872 87 DVVVANAG 94 (296)
T ss_pred CEEEECCC
Confidence 99999987
No 173
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.33 E-value=0.0082 Score=56.58 Aligned_cols=79 Identities=20% Similarity=0.252 Sum_probs=54.5
Q ss_pred HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-c--------CC-----CEEe--eCCC-C
Q 021628 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-L--------GA-----DLAI--DYTK-E 206 (310)
Q Consensus 144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~--------g~-----~~~~--~~~~-~ 206 (310)
...+.+.|.+|+|+|++|.+|...+..+... |.+|++++++.++.+.+.+ + |. ..++ +..+ +
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~-G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~e 151 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPD 151 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHH
Confidence 3566778999999999999999988877774 9999999999888765422 1 11 1122 2222 1
Q ss_pred cccccCCCccEEEeCCC
Q 021628 207 NIEDLPEKFDVVFDAVG 223 (310)
Q Consensus 207 ~~~~~~~~~dvvi~~~g 223 (310)
++....+++|+||+++|
T Consensus 152 sI~~aLggiDiVVn~AG 168 (576)
T PLN03209 152 QIGPALGNASVVICCIG 168 (576)
T ss_pred HHHHHhcCCCEEEEccc
Confidence 12223458999999986
No 174
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.32 E-value=0.011 Score=47.45 Aligned_cols=88 Identities=26% Similarity=0.282 Sum_probs=60.7
Q ss_pred EEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcc---cccCCCccEEEeCCCC------
Q 021628 154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI---EDLPEKFDVVFDAVGQ------ 224 (310)
Q Consensus 154 vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~dvvi~~~g~------ 224 (310)
|+|+|++|.+|...++.+... +.+|++++|++++.+. ..+.+ ++..+-.+. .....++|.||.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~-~~~V~~~~R~~~~~~~--~~~~~-~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~ 76 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRR-GHEVTALVRSPSKAED--SPGVE-IIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVD 76 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TSEEEEEESSGGGHHH--CTTEE-EEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHH
T ss_pred eEEECCCChHHHHHHHHHHHC-CCEEEEEecCchhccc--ccccc-cceeeehhhhhhhhhhhhcchhhhhhhhhccccc
Confidence 789999999999999988885 8999999999998876 33333 333322222 2334589999999873
Q ss_pred -hHHHHhhcccC--CEEEEEeCCC
Q 021628 225 -CDKALKAVKEG--GRVVSIIGSV 245 (310)
Q Consensus 225 -~~~~~~~l~~~--G~~v~~g~~~ 245 (310)
....++.+... .+++.++...
T Consensus 77 ~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 77 AAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp HHHHHHHHHHHTTSSEEEEEEETT
T ss_pred ccccccccccccccccceeeeccc
Confidence 24444444333 4777776543
No 175
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.25 E-value=0.018 Score=46.96 Aligned_cols=73 Identities=29% Similarity=0.371 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-Hc----CCCEE-eeCCC-CcccccCCCccEEEeCC
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL----GADLA-IDYTK-ENIEDLPEKFDVVFDAV 222 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~----g~~~~-~~~~~-~~~~~~~~~~dvvi~~~ 222 (310)
.+.+++|+|++|.+|...+..+... |.+++++.++.++.+.+. ++ +.... .+..+ ++......++|+||.++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~-g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at 105 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLARE-GARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG 105 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence 5679999998899999887777664 889999999888776653 23 22211 11111 11223345789999987
Q ss_pred C
Q 021628 223 G 223 (310)
Q Consensus 223 g 223 (310)
+
T Consensus 106 ~ 106 (194)
T cd01078 106 A 106 (194)
T ss_pred C
Confidence 6
No 176
>PRK08317 hypothetical protein; Provisional
Probab=96.25 E-value=0.07 Score=44.64 Aligned_cols=98 Identities=24% Similarity=0.299 Sum_probs=66.1
Q ss_pred HHhcccCCCCEEEEEcCCcchHHHHHHHHHhh-cCCcEEEEecChhhHHHHHHc----CCC-EEeeCCCCcccccCCCcc
Q 021628 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLRSL----GAD-LAIDYTKENIEDLPEKFD 216 (310)
Q Consensus 143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~-~g~~vi~~~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~d 216 (310)
++...+.++++||-+| +|. |..+..+++.. .+.+++.++.+++.++.+++. +.. .+...+..........+|
T Consensus 12 ~~~~~~~~~~~vLdiG-~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 89 (241)
T PRK08317 12 FELLAVQPGDRVLDVG-CGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLPFPDGSFD 89 (241)
T ss_pred HHHcCCCCCCEEEEeC-CCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCCCCCCCce
Confidence 3567788999999999 655 88888888874 135889999999888877653 111 122222122222235689
Q ss_pred EEEeCCC-----C----hHHHHhhcccCCEEEEEe
Q 021628 217 VVFDAVG-----Q----CDKALKAVKEGGRVVSII 242 (310)
Q Consensus 217 vvi~~~g-----~----~~~~~~~l~~~G~~v~~g 242 (310)
+|+.... + +..+.+.|+++|.++...
T Consensus 90 ~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 90 AVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred EEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 8875421 2 378889999999998765
No 177
>PLN03139 formate dehydrogenase; Provisional
Probab=96.25 E-value=0.033 Score=50.32 Aligned_cols=106 Identities=20% Similarity=0.270 Sum_probs=73.6
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----- 224 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~----- 224 (310)
.|.+|.|+| .|.+|...++.++.. |.+|++.+++....+..++.|.... .++.+....+|+|+.+.+.
T Consensus 198 ~gktVGIVG-~G~IG~~vA~~L~af-G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell~~sDvV~l~lPlt~~T~ 270 (386)
T PLN03139 198 EGKTVGTVG-AGRIGRLLLQRLKPF-NCNLLYHDRLKMDPELEKETGAKFE-----EDLDAMLPKCDVVVINTPLTEKTR 270 (386)
T ss_pred CCCEEEEEe-ecHHHHHHHHHHHHC-CCEEEEECCCCcchhhHhhcCceec-----CCHHHHHhhCCEEEEeCCCCHHHH
Confidence 578999999 999999999999984 9999998877544444445553221 1344455678999988762
Q ss_pred --h-HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628 225 --C-DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK 274 (310)
Q Consensus 225 --~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (310)
+ ...+..|+++..+|.++.- .--+-+++++.+.+|++.
T Consensus 271 ~li~~~~l~~mk~ga~lIN~aRG------------~iVDe~AL~~AL~sG~l~ 311 (386)
T PLN03139 271 GMFNKERIAKMKKGVLIVNNARG------------AIMDTQAVADACSSGHIG 311 (386)
T ss_pred HHhCHHHHhhCCCCeEEEECCCC------------chhhHHHHHHHHHcCCce
Confidence 1 5678899999988888631 112344556666666664
No 178
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.19 E-value=0.021 Score=49.44 Aligned_cols=91 Identities=25% Similarity=0.379 Sum_probs=59.1
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEEeCCCCh-
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC- 225 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~- 225 (310)
..+.+++|+| +|++|.+++..+... | .+|+++.++.++.+.+ ++++....+.. ..+.......+|+||+|++.-
T Consensus 121 ~~~k~vlVlG-aGg~a~ai~~aL~~~-g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~~~~~~~~DivInaTp~g~ 197 (278)
T PRK00258 121 LKGKRILILG-AGGAARAVILPLLDL-GVAEITIVNRTVERAEELAKLFGALGKAEL-DLELQEELADFDLIINATSAGM 197 (278)
T ss_pred CCCCEEEEEc-CcHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhhhccceee-cccchhccccCCEEEECCcCCC
Confidence 4567899999 799999999988875 8 6899999998887666 34432110111 111123345799999997621
Q ss_pred -------HHHHhhcccCCEEEEEe
Q 021628 226 -------DKALKAVKEGGRVVSII 242 (310)
Q Consensus 226 -------~~~~~~l~~~G~~v~~g 242 (310)
.....++++...++.+-
T Consensus 198 ~~~~~~~~~~~~~l~~~~~v~Div 221 (278)
T PRK00258 198 SGELPLPPLPLSLLRPGTIVYDMI 221 (278)
T ss_pred CCCCCCCCCCHHHcCCCCEEEEee
Confidence 12235666666666664
No 179
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.026 Score=47.45 Aligned_cols=73 Identities=32% Similarity=0.479 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCCEE-eeCCCCc-cc---ccCCCccEEEeCCC
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLA-IDYTKEN-IE---DLPEKFDVVFDAVG 223 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~-~~~~~~~-~~---~~~~~~dvvi~~~g 223 (310)
.+.+++|+|++|.+|...++.+... |.+|+++.+++++.+.+. +.+...+ .+..+.. .. +...++|++|++.|
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag 86 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQR-GARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAG 86 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCC
Confidence 5689999999999999999988875 999999999888776653 3443322 2322211 11 11236899998876
No 180
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.024 Score=50.34 Aligned_cols=73 Identities=26% Similarity=0.488 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH----HHcCCCE-Ee--eCCCC-cccc-------cCCC
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AI--DYTKE-NIED-------LPEK 214 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-~~--~~~~~-~~~~-------~~~~ 214 (310)
.+++++|+|+++++|.+.++.+... |++|+++.+++++++.+ ++.+.+. ++ |..+. +... ...+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~-G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARR-GARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR 84 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 5689999999999999988887774 99999999998887654 2345432 22 22221 1111 1246
Q ss_pred ccEEEeCCC
Q 021628 215 FDVVFDAVG 223 (310)
Q Consensus 215 ~dvvi~~~g 223 (310)
+|++|+++|
T Consensus 85 iD~lVnnAG 93 (330)
T PRK06139 85 IDVWVNNVG 93 (330)
T ss_pred CCEEEECCC
Confidence 899999987
No 181
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.15 E-value=0.02 Score=53.80 Aligned_cols=71 Identities=20% Similarity=0.269 Sum_probs=53.3
Q ss_pred cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG 223 (310)
Q Consensus 148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g 223 (310)
+.+|++|+|+| .|..|++++.+++.. |++|++.+.++++.+.+++.|...+...+. .+....+|+|+.+.|
T Consensus 9 ~~~~~~v~V~G-~G~sG~aa~~~L~~~-G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~---~~~l~~~D~VV~SpG 79 (488)
T PRK03369 9 LLPGAPVLVAG-AGVTGRAVLAALTRF-GARPTVCDDDPDALRPHAERGVATVSTSDA---VQQIADYALVVTSPG 79 (488)
T ss_pred ccCCCeEEEEc-CCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHhCCCEEEcCcch---HhHhhcCCEEEECCC
Confidence 45789999999 999999999999995 999999988777776677777744322221 112246799998877
No 182
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.13 E-value=0.025 Score=48.71 Aligned_cols=71 Identities=18% Similarity=0.325 Sum_probs=50.4
Q ss_pred CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCCC-cccc-------cCCCccEEEeCC
Q 021628 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKE-NIED-------LPEKFDVVFDAV 222 (310)
Q Consensus 152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~-~~~~-------~~~~~dvvi~~~ 222 (310)
++++|+|++|.+|...++.+... |++|+++++++++.+.+.+.+...+ .|..+. .... ...++|++|+++
T Consensus 2 k~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAA-GYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 47999999999999988887774 9999999999888777665554332 233221 1111 124689999998
Q ss_pred C
Q 021628 223 G 223 (310)
Q Consensus 223 g 223 (310)
|
T Consensus 81 g 81 (274)
T PRK05693 81 G 81 (274)
T ss_pred C
Confidence 7
No 183
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.13 E-value=0.12 Score=42.52 Aligned_cols=98 Identities=16% Similarity=0.115 Sum_probs=64.4
Q ss_pred HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHH----HcCCC---EEeeCCCCcccccCCC
Q 021628 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR----SLGAD---LAIDYTKENIEDLPEK 214 (310)
Q Consensus 143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~----~~g~~---~~~~~~~~~~~~~~~~ 214 (310)
++...++++++||-.| + +.|..+..+++... +.+|+.++.+++..+.++ +.+.. .++..+-.........
T Consensus 65 ~~~l~~~~~~~VLDiG-~-GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~~~~~ 142 (205)
T PRK13944 65 CELIEPRPGMKILEVG-T-GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLEKHAP 142 (205)
T ss_pred HHhcCCCCCCEEEEEC-c-CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCccCCC
Confidence 4566788999999998 3 45778877777642 357899999988766554 34432 2233222111112347
Q ss_pred ccEEEeCCC--C-hHHHHhhcccCCEEEEEe
Q 021628 215 FDVVFDAVG--Q-CDKALKAVKEGGRVVSII 242 (310)
Q Consensus 215 ~dvvi~~~g--~-~~~~~~~l~~~G~~v~~g 242 (310)
+|+|+.+.. . .+...+.|+++|+++..-
T Consensus 143 fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~~ 173 (205)
T PRK13944 143 FDAIIVTAAASTIPSALVRQLKDGGVLVIPV 173 (205)
T ss_pred ccEEEEccCcchhhHHHHHhcCcCcEEEEEE
Confidence 999987654 3 477889999999997643
No 184
>PRK06182 short chain dehydrogenase; Validated
Probab=96.10 E-value=0.03 Score=48.11 Aligned_cols=73 Identities=27% Similarity=0.393 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCCC-cccc-------cCCCccEEEe
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKE-NIED-------LPEKFDVVFD 220 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~-~~~~-------~~~~~dvvi~ 220 (310)
.+.+++|+|++|.+|...++.+... |.+|+++++++++++.+.+.+...+ .|..+. +... ...++|++|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQ-GYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3678999999999999988887774 9999999999888776654443322 232221 1111 1237899999
Q ss_pred CCC
Q 021628 221 AVG 223 (310)
Q Consensus 221 ~~g 223 (310)
++|
T Consensus 81 ~ag 83 (273)
T PRK06182 81 NAG 83 (273)
T ss_pred CCC
Confidence 987
No 185
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.034 Score=47.95 Aligned_cols=73 Identities=21% Similarity=0.363 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCCCc-c----cc----cCCCccEEE
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKEN-I----ED----LPEKFDVVF 219 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~~-~----~~----~~~~~dvvi 219 (310)
.+.+|+|+|++|.+|...++.+... |.+|+++++++++++.+.+.+...+ .|..+.. . .. ....+|++|
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~-G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSD-GWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 4678999999999999988877774 9999999999988887766554332 2322211 1 11 113689999
Q ss_pred eCCC
Q 021628 220 DAVG 223 (310)
Q Consensus 220 ~~~g 223 (310)
+++|
T Consensus 82 ~~Ag 85 (277)
T PRK05993 82 NNGA 85 (277)
T ss_pred ECCC
Confidence 9876
No 186
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.05 E-value=0.031 Score=47.46 Aligned_cols=73 Identities=22% Similarity=0.375 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEE-eeCCCCc-ccc-------cCCCccEEE
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLA-IDYTKEN-IED-------LPEKFDVVF 219 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~-~~~~~~~-~~~-------~~~~~dvvi 219 (310)
.|++|+|+|++|.+|...++.+... |++|+++++++.+.+.. ++++...+ .+..++. ... ...++|++|
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 84 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAE-GATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAF 84 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4789999999999999999888774 99999999987776554 34443221 2322211 110 123679999
Q ss_pred eCCC
Q 021628 220 DAVG 223 (310)
Q Consensus 220 ~~~g 223 (310)
.++|
T Consensus 85 ~~ag 88 (255)
T PRK06057 85 NNAG 88 (255)
T ss_pred ECCC
Confidence 8875
No 187
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.03 E-value=0.21 Score=41.36 Aligned_cols=98 Identities=21% Similarity=0.226 Sum_probs=64.1
Q ss_pred HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC--cEEEEecChhhHHHHH----HcCCCE--EeeCCCCcccccCC
Q 021628 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLR----SLGADL--AIDYTKENIEDLPE 213 (310)
Q Consensus 142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~--~vi~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~~~~~ 213 (310)
+++...++++++||-+| .+.|..+..+++.. +. +|+.++.+++..+.++ +++.+. ++..+.........
T Consensus 69 ~~~~l~~~~~~~VLDiG--~GsG~~a~~la~~~-~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~~~~~ 145 (215)
T TIGR00080 69 MTELLELKPGMKVLEIG--TGSGYQAAVLAEIV-GRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGWEPLA 145 (215)
T ss_pred HHHHhCCCCcCEEEEEC--CCccHHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCCcccC
Confidence 44566789999999998 45677778888864 43 5889998888776664 345432 22222111111234
Q ss_pred CccEEEeCCC---ChHHHHhhcccCCEEEEEe
Q 021628 214 KFDVVFDAVG---QCDKALKAVKEGGRVVSII 242 (310)
Q Consensus 214 ~~dvvi~~~g---~~~~~~~~l~~~G~~v~~g 242 (310)
.+|+|+-... -....++.|+++|+++..-
T Consensus 146 ~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~~ 177 (215)
T TIGR00080 146 PYDRIYVTAAGPKIPEALIDQLKEGGILVMPV 177 (215)
T ss_pred CCCEEEEcCCcccccHHHHHhcCcCcEEEEEE
Confidence 7998875532 2467889999999998654
No 188
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=96.02 E-value=0.11 Score=44.26 Aligned_cols=92 Identities=21% Similarity=0.215 Sum_probs=62.4
Q ss_pred ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC-CEEeeCCCCcccccCCCccEEEeCCC--
Q 021628 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-DLAIDYTKENIEDLPEKFDVVFDAVG-- 223 (310)
Q Consensus 147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~dvvi~~~g-- 223 (310)
...++++||-+| +|. |..+..+++. +.+++.++.+++.++.+++... ...+..+-+........+|+|+....
T Consensus 39 ~~~~~~~vLDiG-cG~-G~~~~~l~~~--~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~~~~~~~~~fD~V~s~~~l~ 114 (251)
T PRK10258 39 PQRKFTHVLDAG-CGP-GWMSRYWRER--GSQVTALDLSPPMLAQARQKDAADHYLAGDIESLPLATATFDLAWSNLAVQ 114 (251)
T ss_pred CccCCCeEEEee-CCC-CHHHHHHHHc--CCeEEEEECCHHHHHHHHhhCCCCCEEEcCcccCcCCCCcEEEEEECchhh
Confidence 345678899998 665 7777777653 7899999999999888866432 22222222222222346999987643
Q ss_pred ---C----hHHHHhhcccCCEEEEEe
Q 021628 224 ---Q----CDKALKAVKEGGRVVSII 242 (310)
Q Consensus 224 ---~----~~~~~~~l~~~G~~v~~g 242 (310)
. +.++.+.|+|+|.++...
T Consensus 115 ~~~d~~~~l~~~~~~Lk~gG~l~~~~ 140 (251)
T PRK10258 115 WCGNLSTALRELYRVVRPGGVVAFTT 140 (251)
T ss_pred hcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence 1 367788999999998764
No 189
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.00 E-value=0.023 Score=48.25 Aligned_cols=43 Identities=33% Similarity=0.462 Sum_probs=36.8
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
-.+.+++|+|++|.+|...+..+... |++|+++.+++++++.+
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~ 49 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQA-GAKVVLASRRVERLKEL 49 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 35789999999999999988888775 99999999988876555
No 190
>PRK07825 short chain dehydrogenase; Provisional
Probab=95.99 E-value=0.037 Score=47.52 Aligned_cols=72 Identities=25% Similarity=0.311 Sum_probs=49.0
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEe--eCCCCc-c-------cccCCCccEEE
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAI--DYTKEN-I-------EDLPEKFDVVF 219 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~--~~~~~~-~-------~~~~~~~dvvi 219 (310)
+.+++|+|++|++|...++.+... |++|+++++++++++.+ ++++....+ |..+.+ . .....++|++|
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAAL-GARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 578999999999999988876664 99999999998887655 344411222 222211 1 01124689999
Q ss_pred eCCC
Q 021628 220 DAVG 223 (310)
Q Consensus 220 ~~~g 223 (310)
+++|
T Consensus 84 ~~ag 87 (273)
T PRK07825 84 NNAG 87 (273)
T ss_pred ECCC
Confidence 9886
No 191
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=95.95 E-value=0.11 Score=42.08 Aligned_cols=93 Identities=28% Similarity=0.370 Sum_probs=61.8
Q ss_pred ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCE--EeeCCCCcccccCCCccEEEe
Q 021628 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL--AIDYTKENIEDLPEKFDVVFD 220 (310)
Q Consensus 147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~~~~~~~dvvi~ 220 (310)
.++++++|+-+| .+.|..+..+++...+.+|+.++.+++..+.++ +.+.+. +...+.++... .+.+|+|+.
T Consensus 42 ~l~~g~~VLDiG--cGtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~~~~-~~~fDlV~~ 118 (187)
T PRK00107 42 YLPGGERVLDVG--SGAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEEFGQ-EEKFDVVTS 118 (187)
T ss_pred hcCCCCeEEEEc--CCCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhhCCC-CCCccEEEE
Confidence 345689999998 345677777776534678999999988776664 344432 22222222222 457999986
Q ss_pred CC-CC----hHHHHhhcccCCEEEEEe
Q 021628 221 AV-GQ----CDKALKAVKEGGRVVSII 242 (310)
Q Consensus 221 ~~-g~----~~~~~~~l~~~G~~v~~g 242 (310)
.. +. ++.+.+.|+++|+++.+-
T Consensus 119 ~~~~~~~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 119 RAVASLSDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred ccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence 53 33 367889999999999774
No 192
>PRK04148 hypothetical protein; Provisional
Probab=95.91 E-value=0.054 Score=41.06 Aligned_cols=73 Identities=15% Similarity=0.166 Sum_probs=49.7
Q ss_pred cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG 223 (310)
Q Consensus 148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g 223 (310)
...+.++++.| .| .|...+..++.+ |.+|++++.+++..+.+++.+.+.+.+---+.-.+.-+++|+++.+..
T Consensus 14 ~~~~~kileIG-~G-fG~~vA~~L~~~-G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y~~a~liysirp 86 (134)
T PRK04148 14 KGKNKKIVELG-IG-FYFKVAKKLKES-GFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIYKNAKLIYSIRP 86 (134)
T ss_pred cccCCEEEEEE-ec-CCHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHHhcCCEEEEeCC
Confidence 34568899999 88 887444444454 999999999999998888877654432110111122357899988875
No 193
>PRK06196 oxidoreductase; Provisional
Probab=95.90 E-value=0.04 Score=48.53 Aligned_cols=73 Identities=16% Similarity=0.306 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEeeCCCCcccc----------cCCCccEE
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIED----------LPEKFDVV 218 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~----------~~~~~dvv 218 (310)
.+.+|+|+|++|++|.+.+..+... |.+|+++.+++++.+.+ .++..-..+..+-.+... ...++|++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~-G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 103 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQA-GAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL 103 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 4679999999999999988877664 99999999988776544 333211222211111111 12468999
Q ss_pred EeCCC
Q 021628 219 FDAVG 223 (310)
Q Consensus 219 i~~~g 223 (310)
|+++|
T Consensus 104 i~nAg 108 (315)
T PRK06196 104 INNAG 108 (315)
T ss_pred EECCC
Confidence 99876
No 194
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=95.84 E-value=0.049 Score=46.48 Aligned_cols=43 Identities=30% Similarity=0.468 Sum_probs=36.6
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR 193 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~ 193 (310)
.+.+++|+|+++++|...+..+... |++|+++++++++.+.+.
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~ 47 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAE-GARVAVLERSAEKLASLR 47 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH
Confidence 4689999999999999988877774 999999999888776664
No 195
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.84 E-value=0.013 Score=46.47 Aligned_cols=89 Identities=19% Similarity=0.277 Sum_probs=61.1
Q ss_pred EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCc---ccccCCCccEEEeCCCCh----
Q 021628 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN---IEDLPEKFDVVFDAVGQC---- 225 (310)
Q Consensus 153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~dvvi~~~g~~---- 225 (310)
+|.|+|++|.+|..-++-|+.. |-.|++++++++|....+... ++..+-.+ ..+...|+|+||++.+..
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~R-GHeVTAivRn~~K~~~~~~~~---i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~ 77 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKR-GHEVTAIVRNASKLAARQGVT---ILQKDIFDLTSLASDLAGHDAVISAFGAGASDN 77 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhC-CCeeEEEEeChHhccccccce---eecccccChhhhHhhhcCCceEEEeccCCCCCh
Confidence 5789999999999999999985 999999999999886542221 22221111 234456999999997621
Q ss_pred --------HHHHhhccc--CCEEEEEeCCC
Q 021628 226 --------DKALKAVKE--GGRVVSIIGSV 245 (310)
Q Consensus 226 --------~~~~~~l~~--~G~~v~~g~~~ 245 (310)
+..+..|+. --|+..+|+..
T Consensus 78 ~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 78 DELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred hHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 234555554 26788887654
No 196
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.03 Score=47.52 Aligned_cols=71 Identities=23% Similarity=0.309 Sum_probs=45.2
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh-hhHHHHHHcCCCEEe--eCCC-CcccccCCCccEEEeCCC
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDLLRSLGADLAI--DYTK-ENIEDLPEKFDVVFDAVG 223 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~-~~~~~~~~~g~~~~~--~~~~-~~~~~~~~~~dvvi~~~g 223 (310)
+.+++|+|++|++|...++.+... |++|+++.+++ ++.+... .+....+ +..+ ++.....+++|++|+++|
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~-G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG 88 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAK-GAKVIGLTHSKINNSESND-ESPNEWIKWECGKEESLDKQLASLDVLILNHG 88 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEECCchhhhhhhc-cCCCeEEEeeCCCHHHHHHhcCCCCEEEECCc
Confidence 679999999999999988877664 99999998876 3222211 1111222 2221 112222346899999886
No 197
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=95.83 E-value=0.34 Score=39.11 Aligned_cols=113 Identities=24% Similarity=0.294 Sum_probs=71.3
Q ss_pred HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCCE--EeeCCCCcccccCCCccE
Q 021628 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADL--AIDYTKENIEDLPEKFDV 217 (310)
Q Consensus 144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~~dv 217 (310)
....+.++++||=+| +| .|..+..+++...+.+++.++.+++..+.+++ ++... ++..+.. ......+|+
T Consensus 25 ~~l~~~~~~~vLDiG-~G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d~~--~~~~~~~D~ 100 (187)
T PRK08287 25 SKLELHRAKHLIDVG-AG-TGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGEAP--IELPGKADA 100 (187)
T ss_pred HhcCCCCCCEEEEEC-Cc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecCch--hhcCcCCCE
Confidence 455677889999888 44 47878888776324689999999987776643 33221 2222111 112346899
Q ss_pred EEeCC--CC----hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCe
Q 021628 218 VFDAV--GQ----CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKV 273 (310)
Q Consensus 218 vi~~~--g~----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (310)
|+... +. +..+.+.|+++|+++... .......++.+++.+..+
T Consensus 101 v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~~-------------~~~~~~~~~~~~l~~~g~ 149 (187)
T PRK08287 101 IFIGGSGGNLTAIIDWSLAHLHPGGRLVLTF-------------ILLENLHSALAHLEKCGV 149 (187)
T ss_pred EEECCCccCHHHHHHHHHHhcCCCeEEEEEE-------------ecHhhHHHHHHHHHHCCC
Confidence 98653 22 367889999999997642 122345566667766554
No 198
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=95.80 E-value=0.052 Score=37.96 Aligned_cols=78 Identities=28% Similarity=0.305 Sum_probs=54.4
Q ss_pred chHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCE---EeeCCCCcccccCCCccEEEeCCC--C-------hHHHH
Q 021628 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL---AIDYTKENIEDLPEKFDVVFDAVG--Q-------CDKAL 229 (310)
Q Consensus 162 ~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~dvvi~~~g--~-------~~~~~ 229 (310)
+.|..+..+++. .+.+++.++.+++..+.+++..... +...+..++....+.+|+|+.... . ++++.
T Consensus 6 G~G~~~~~l~~~-~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~sfD~v~~~~~~~~~~~~~~~l~e~~ 84 (95)
T PF08241_consen 6 GTGRFAAALAKR-GGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAEDLPFPDNSFDVVFSNSVLHHLEDPEAALREIY 84 (95)
T ss_dssp TTSHHHHHHHHT-TTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTTSSSS-TT-EEEEEEESHGGGSSHHHHHHHHHH
T ss_pred cCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHhcccccCchheeehHHhCccccccccccccccceeeccCHHHHHHHHH
Confidence 478999999998 5889999999999988887654222 333333344334567999987643 1 37899
Q ss_pred hhcccCCEEEE
Q 021628 230 KAVKEGGRVVS 240 (310)
Q Consensus 230 ~~l~~~G~~v~ 240 (310)
+.|+|+|+++.
T Consensus 85 rvLk~gG~l~~ 95 (95)
T PF08241_consen 85 RVLKPGGRLVI 95 (95)
T ss_dssp HHEEEEEEEEE
T ss_pred HHcCcCeEEeC
Confidence 99999999874
No 199
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.77 E-value=0.054 Score=42.19 Aligned_cols=92 Identities=23% Similarity=0.296 Sum_probs=56.6
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEEeCCCCh--
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC-- 225 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~-- 225 (310)
..+.+++|+| .|.+|...+..+...++.+++++++++++.+.+ ++++...+ .....+..+..+++|+|+.|++..
T Consensus 17 ~~~~~i~iiG-~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dvvi~~~~~~~~ 94 (155)
T cd01065 17 LKGKKVLILG-AGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGI-AIAYLDLEELLAEADLIINTTPVGMK 94 (155)
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccc-ceeecchhhccccCCEEEeCcCCCCC
Confidence 4578899999 699999888877764236788888888876654 45553210 000112223356899999998631
Q ss_pred -----HHHHhhcccCCEEEEEe
Q 021628 226 -----DKALKAVKEGGRVVSII 242 (310)
Q Consensus 226 -----~~~~~~l~~~G~~v~~g 242 (310)
......++++..++.++
T Consensus 95 ~~~~~~~~~~~~~~~~~v~D~~ 116 (155)
T cd01065 95 PGDELPLPPSLLKPGGVVYDVV 116 (155)
T ss_pred CCCCCCCCHHHcCCCCEEEEcC
Confidence 11123455666666554
No 200
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=95.74 E-value=0.055 Score=47.76 Aligned_cols=104 Identities=22% Similarity=0.286 Sum_probs=74.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----- 224 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~----- 224 (310)
.|.++.|+| .|.+|.+.++.++. +|.+++..++++. .+..+..+..++ ++.+..+..|++.-.++.
T Consensus 145 ~gktvGIiG-~GrIG~avA~r~~~-Fgm~v~y~~~~~~-~~~~~~~~~~y~------~l~ell~~sDii~l~~Plt~~T~ 215 (324)
T COG1052 145 RGKTLGIIG-LGRIGQAVARRLKG-FGMKVLYYDRSPN-PEAEKELGARYV------DLDELLAESDIISLHCPLTPETR 215 (324)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhc-CCCEEEEECCCCC-hHHHhhcCceec------cHHHHHHhCCEEEEeCCCChHHh
Confidence 488999999 99999999999997 6999999998765 333333444332 144555678888776651
Q ss_pred -h--HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628 225 -C--DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK 274 (310)
Q Consensus 225 -~--~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (310)
+ ...++.|++++.+|.++.-. --+-+.+++.+++|++.
T Consensus 216 hLin~~~l~~mk~ga~lVNtaRG~------------~VDe~ALi~AL~~g~i~ 256 (324)
T COG1052 216 HLINAEELAKMKPGAILVNTARGG------------LVDEQALIDALKSGKIA 256 (324)
T ss_pred hhcCHHHHHhCCCCeEEEECCCcc------------ccCHHHHHHHHHhCCcc
Confidence 1 68889999999999886311 12345667777777765
No 201
>PRK08177 short chain dehydrogenase; Provisional
Probab=95.72 E-value=0.049 Score=45.30 Aligned_cols=71 Identities=20% Similarity=0.360 Sum_probs=46.7
Q ss_pred CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEe--eCCCC-cccc----c-CCCccEEEeCCC
Q 021628 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI--DYTKE-NIED----L-PEKFDVVFDAVG 223 (310)
Q Consensus 152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~--~~~~~-~~~~----~-~~~~dvvi~~~g 223 (310)
.+++|+|++|.+|...+..+... |++|+++++++++.+.+++++..... |-.+. +... . ..++|++|.++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLER-GWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhC-CCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 47999999999999977776664 99999999988777666554322222 21111 1111 1 136889888765
No 202
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=95.71 E-value=0.078 Score=45.63 Aligned_cols=73 Identities=12% Similarity=0.160 Sum_probs=49.4
Q ss_pred HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEE
Q 021628 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVF 219 (310)
Q Consensus 142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi 219 (310)
+++......+++++|+| +|+.+.+++..++.+ |+ +++++.|++++.+.+ +.++... . +.. ....+|+||
T Consensus 113 ~L~~~~~~~~~~vlilG-aGGaarAi~~aL~~~-g~~~i~i~nR~~~~a~~la~~~~~~~----~-~~~--~~~~~dlvI 183 (272)
T PRK12550 113 LLASYQVPPDLVVALRG-SGGMAKAVAAALRDA-GFTDGTIVARNEKTGKALAELYGYEW----R-PDL--GGIEADILV 183 (272)
T ss_pred HHHhcCCCCCCeEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHhCCcc----h-hhc--ccccCCEEE
Confidence 44433444567999999 899999988877775 76 588999998887766 3443211 0 011 123589999
Q ss_pred eCCC
Q 021628 220 DAVG 223 (310)
Q Consensus 220 ~~~g 223 (310)
+|++
T Consensus 184 NaTp 187 (272)
T PRK12550 184 NVTP 187 (272)
T ss_pred ECCc
Confidence 9975
No 203
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.71 E-value=0.037 Score=48.02 Aligned_cols=72 Identities=19% Similarity=0.180 Sum_probs=48.1
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHcCCC-EEeeCCC-CcccccCCCccEEEeCCC
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLGAD-LAIDYTK-ENIEDLPEKFDVVFDAVG 223 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~g~~-~~~~~~~-~~~~~~~~~~dvvi~~~g 223 (310)
.+.+++|+| +|+.+.+++..+..+ |+ +++++.|+.+|.+.+ ++++.. .+..... ++.......+|+||+|++
T Consensus 124 ~~k~vlvlG-aGGaarai~~aL~~~-G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp 199 (282)
T TIGR01809 124 AGFRGLVIG-AGGTSRAAVYALASL-GVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVP 199 (282)
T ss_pred CCceEEEEc-CcHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCC
Confidence 578999999 899999988877775 76 688889998887666 444321 1111110 111222357899999986
No 204
>PLN02928 oxidoreductase family protein
Probab=95.66 E-value=0.062 Score=48.05 Aligned_cols=91 Identities=24% Similarity=0.322 Sum_probs=61.9
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcC-----CCEEee--CCCCcccccCCCccEEEeCC
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG-----ADLAID--YTKENIEDLPEKFDVVFDAV 222 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g-----~~~~~~--~~~~~~~~~~~~~dvvi~~~ 222 (310)
.|.++.|+| .|.+|...++.++.. |.+|++.+++..+... ..++ .....+ ....++.+....+|+|+.+.
T Consensus 158 ~gktvGIiG-~G~IG~~vA~~l~af-G~~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l 234 (347)
T PLN02928 158 FGKTVFILG-YGAIGIELAKRLRPF-GVKLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC 234 (347)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhhC-CCEEEEECCCCChhhh-hhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence 478999999 999999999999995 9999999876332111 1110 000000 01123444456789999987
Q ss_pred CC------h--HHHHhhcccCCEEEEEeC
Q 021628 223 GQ------C--DKALKAVKEGGRVVSIIG 243 (310)
Q Consensus 223 g~------~--~~~~~~l~~~G~~v~~g~ 243 (310)
+. + ...+..|+++..+|.++.
T Consensus 235 Plt~~T~~li~~~~l~~Mk~ga~lINvaR 263 (347)
T PLN02928 235 TLTKETAGIVNDEFLSSMKKGALLVNIAR 263 (347)
T ss_pred CCChHhhcccCHHHHhcCCCCeEEEECCC
Confidence 62 1 688899999999998863
No 205
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=95.65 E-value=0.046 Score=47.16 Aligned_cols=90 Identities=21% Similarity=0.320 Sum_probs=56.6
Q ss_pred cCCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHHH-cCCCE----EeeCCCCcccccCCCccEEEeC
Q 021628 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRS-LGADL----AIDYTKENIEDLPEKFDVVFDA 221 (310)
Q Consensus 148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~~-~g~~~----~~~~~~~~~~~~~~~~dvvi~~ 221 (310)
..+|++++|+| +|+.+.+++.-++.. | .+++++.|+.+|.+.+.+ ++... ..... +... ...+|++|||
T Consensus 123 ~~~~~~vlilG-AGGAarAv~~aL~~~-g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~--~~~~-~~~~dliINa 197 (283)
T COG0169 123 DVTGKRVLILG-AGGAARAVAFALAEA-GAKRITVVNRTRERAEELADLFGELGAAVEAAALA--DLEG-LEEADLLINA 197 (283)
T ss_pred ccCCCEEEEEC-CcHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhhhccccccccccc--cccc-ccccCEEEEC
Confidence 34589999999 899999988888875 7 478888999999777743 43211 11111 1111 1158999999
Q ss_pred CCC-h--HH-----HHhhcccCCEEEEEe
Q 021628 222 VGQ-C--DK-----ALKAVKEGGRVVSII 242 (310)
Q Consensus 222 ~g~-~--~~-----~~~~l~~~G~~v~~g 242 (310)
++. . .. ...++++.-.+..+-
T Consensus 198 Tp~Gm~~~~~~~~~~~~~l~~~~~v~D~v 226 (283)
T COG0169 198 TPVGMAGPEGDSPVPAELLPKGAIVYDVV 226 (283)
T ss_pred CCCCCCCCCCCCCCcHHhcCcCCEEEEec
Confidence 862 1 10 034555555555553
No 206
>PRK05866 short chain dehydrogenase; Provisional
Probab=95.65 E-value=0.065 Score=46.71 Aligned_cols=42 Identities=31% Similarity=0.476 Sum_probs=35.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|++|++|.+.++.+... |++|+++++++++++.+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~-G~~Vi~~~R~~~~l~~~ 80 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARR-GATVVAVARREDLLDAV 80 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence 3578999999999999988877764 99999999998876555
No 207
>PRK07814 short chain dehydrogenase; Provisional
Probab=95.65 E-value=0.052 Score=46.38 Aligned_cols=42 Identities=21% Similarity=0.362 Sum_probs=35.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
++.+++|+|++|.+|...++.+... |++|+++++++++.+.+
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~ 50 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEA-GADVLIAARTESQLDEV 50 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 5789999999999999988887774 99999999988776544
No 208
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.64 E-value=0.031 Score=49.29 Aligned_cols=70 Identities=24% Similarity=0.376 Sum_probs=49.3
Q ss_pred EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEe-eCCC-CcccccCCCccEEEeCCC
Q 021628 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTK-ENIEDLPEKFDVVFDAVG 223 (310)
Q Consensus 153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~-~~~~~~~~~~dvvi~~~g 223 (310)
+|+|+|++|-+|...+..+... |.+|++++++.++...+...+...+. +..+ .++.....++|+||++++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~-g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~ 73 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDE-GYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDAST 73 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCC
Confidence 6999999999999988877774 89999999987766555545543322 2222 122333468999999865
No 209
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.61 E-value=0.083 Score=46.99 Aligned_cols=104 Identities=23% Similarity=0.244 Sum_probs=70.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----- 224 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~----- 224 (310)
.|.+|.|+| .|.+|...++.++.. |.+|++.+++.+.. ....++... .++.+.....|+|+-+.+.
T Consensus 149 ~gktvgIiG-~G~IG~~vA~~l~~~-G~~V~~~d~~~~~~-~~~~~~~~~------~~l~ell~~aDiV~l~lP~t~~T~ 219 (333)
T PRK13243 149 YGKTIGIIG-FGRIGQAVARRAKGF-GMRILYYSRTRKPE-AEKELGAEY------RPLEELLRESDFVSLHVPLTKETY 219 (333)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEECCCCChh-hHHHcCCEe------cCHHHHHhhCCEEEEeCCCChHHh
Confidence 578999999 899999999999984 99999888865443 233344321 1334445678999988762
Q ss_pred --h-HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628 225 --C-DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK 274 (310)
Q Consensus 225 --~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (310)
+ ...+..|+++..++.++.-. --+-+.+.+.+.+|++.
T Consensus 220 ~~i~~~~~~~mk~ga~lIN~aRg~------------~vd~~aL~~aL~~g~i~ 260 (333)
T PRK13243 220 HMINEERLKLMKPTAILVNTARGK------------VVDTKALVKALKEGWIA 260 (333)
T ss_pred hccCHHHHhcCCCCeEEEECcCch------------hcCHHHHHHHHHcCCeE
Confidence 1 57788899999988886311 11234555666666654
No 210
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=95.59 E-value=0.044 Score=47.57 Aligned_cols=71 Identities=21% Similarity=0.227 Sum_probs=48.1
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHcC----CCEEeeCCCCcccccCCCccEEEeCC
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLG----ADLAIDYTKENIEDLPEKFDVVFDAV 222 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~g----~~~~~~~~~~~~~~~~~~~dvvi~~~ 222 (310)
..+.+|+|+| +|+.|.+++..+..+ |+ +++++.++.+|.+.+ ++++ ...+... ++.......+|+||+|+
T Consensus 125 ~~~k~vlIlG-aGGaaraia~aL~~~-G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~--~~~~~~~~~aDiVInaT 200 (284)
T PRK12549 125 ASLERVVQLG-AGGAGAAVAHALLTL-GVERLTIFDVDPARAAALADELNARFPAARATAG--SDLAAALAAADGLVHAT 200 (284)
T ss_pred ccCCEEEEEC-CcHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec--cchHhhhCCCCEEEECC
Confidence 3567999999 899999988888875 76 688888988887666 3332 1122211 11122235789999996
Q ss_pred C
Q 021628 223 G 223 (310)
Q Consensus 223 g 223 (310)
+
T Consensus 201 p 201 (284)
T PRK12549 201 P 201 (284)
T ss_pred c
Confidence 4
No 211
>PRK12829 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.049 Score=46.35 Aligned_cols=46 Identities=28% Similarity=0.362 Sum_probs=38.0
Q ss_pred cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH
Q 021628 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS 194 (310)
Q Consensus 148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~ 194 (310)
.-++.+++|+|+.|.+|...+..+... |.+|+++++++++.+.+.+
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~-g~~V~~~~r~~~~~~~~~~ 53 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEA-GARVHVCDVSEAALAATAA 53 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH
Confidence 357789999999999999988887774 9999999998777665543
No 212
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=95.53 E-value=0.057 Score=46.07 Aligned_cols=44 Identities=32% Similarity=0.469 Sum_probs=36.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS 194 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~ 194 (310)
.+.+++|+|+++++|...++.+... |++|+++.+++++.+.+.+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~l~~ 47 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAE-GARVAVLDKSAAGLQELEA 47 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh
Confidence 4789999999999999988877764 9999999998877766644
No 213
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=95.52 E-value=0.16 Score=40.25 Aligned_cols=95 Identities=25% Similarity=0.272 Sum_probs=58.5
Q ss_pred ccccchHHHHHHHHH-hcccCCCCEEEEEcCCcc-hHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCc
Q 021628 130 ASLPLATETAYEGLE-RSAFSAGKSILVLGGAGG-VGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN 207 (310)
Q Consensus 130 a~~~~~~~ta~~al~-~~~~~~g~~vlI~g~~g~-~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~ 207 (310)
...||....+...++ ...--.|.+|+|.| +|. +|..++..++.. |++++++.++.+++.
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG-~G~~~G~~~a~~L~~~-g~~V~v~~r~~~~l~----------------- 82 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVG-RSNIVGKPLAALLLNR-NATVTVCHSKTKNLK----------------- 82 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEEC-CcHHHHHHHHHHHhhC-CCEEEEEECCchhHH-----------------
Confidence 344554444444443 33346889999999 565 699888888875 888888887643222
Q ss_pred ccccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628 208 IEDLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 208 ~~~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~ 245 (310)
+....+|+||.+++..+ -.-+.++++-.++.++.+.
T Consensus 83 --~~l~~aDiVIsat~~~~ii~~~~~~~~~viIDla~pr 119 (168)
T cd01080 83 --EHTKQADIVIVAVGKPGLVKGDMVKPGAVVIDVGINR 119 (168)
T ss_pred --HHHhhCCEEEEcCCCCceecHHHccCCeEEEEccCCC
Confidence 12346789998887532 1112455565666666543
No 214
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.49 E-value=0.087 Score=46.36 Aligned_cols=85 Identities=18% Similarity=0.277 Sum_probs=61.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCCh----
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC---- 225 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~---- 225 (310)
.|.+|.|+| .|.+|...++.++. +|.+|++.+++.++.. +..... ...++.+....+|+|+.+.+..
T Consensus 135 ~g~tvgIvG-~G~IG~~vA~~l~a-fG~~V~~~~~~~~~~~-----~~~~~~--~~~~l~e~l~~aDvvv~~lPlt~~T~ 205 (312)
T PRK15469 135 EDFTIGILG-AGVLGSKVAQSLQT-WGFPLRCWSRSRKSWP-----GVQSFA--GREELSAFLSQTRVLINLLPNTPETV 205 (312)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHH-CCCEEEEEeCCCCCCC-----Cceeec--ccccHHHHHhcCCEEEECCCCCHHHH
Confidence 578999999 99999999999998 4999999887654321 111111 1123444556889999988621
Q ss_pred ----HHHHhhcccCCEEEEEeC
Q 021628 226 ----DKALKAVKEGGRVVSIIG 243 (310)
Q Consensus 226 ----~~~~~~l~~~G~~v~~g~ 243 (310)
...++.|+++..++.++.
T Consensus 206 ~li~~~~l~~mk~ga~lIN~aR 227 (312)
T PRK15469 206 GIINQQLLEQLPDGAYLLNLAR 227 (312)
T ss_pred HHhHHHHHhcCCCCcEEEECCC
Confidence 467889999999988863
No 215
>PRK07326 short chain dehydrogenase; Provisional
Probab=95.49 E-value=0.057 Score=45.16 Aligned_cols=42 Identities=21% Similarity=0.350 Sum_probs=35.6
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|++|.+|...++.+... |++|+++++++++.+.+
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~-g~~V~~~~r~~~~~~~~ 46 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAE-GYKVAITARDQKELEEA 46 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHC-CCEEEEeeCCHHHHHHH
Confidence 4688999999999999988877774 99999999988776555
No 216
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=95.47 E-value=0.052 Score=48.82 Aligned_cols=91 Identities=29% Similarity=0.341 Sum_probs=61.6
Q ss_pred CEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHHHcC---C-CEEeeCCCC-cccccCCCccEEEeCCCCh
Q 021628 152 KSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLG---A-DLAIDYTKE-NIEDLPEKFDVVFDAVGQC 225 (310)
Q Consensus 152 ~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~~~g---~-~~~~~~~~~-~~~~~~~~~dvvi~~~g~~ 225 (310)
.+|||+| +|.+|..+++.+.+. + .+|++.+++.++++.+.... . ...++-.+. ...+..++.|+||+|.+..
T Consensus 2 ~~ilviG-aG~Vg~~va~~la~~-~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~ 79 (389)
T COG1748 2 MKILVIG-AGGVGSVVAHKLAQN-GDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF 79 (389)
T ss_pred CcEEEEC-CchhHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence 4789999 699999999976663 6 79999999999998886653 1 123333322 2333456779999998732
Q ss_pred --HHHH-hhcccCCEEEEEeCC
Q 021628 226 --DKAL-KAVKEGGRVVSIIGS 244 (310)
Q Consensus 226 --~~~~-~~l~~~G~~v~~g~~ 244 (310)
..++ .|+..+=.++....+
T Consensus 80 ~~~~i~ka~i~~gv~yvDts~~ 101 (389)
T COG1748 80 VDLTILKACIKTGVDYVDTSYY 101 (389)
T ss_pred hhHHHHHHHHHhCCCEEEcccC
Confidence 3444 455556566665543
No 217
>PRK06500 short chain dehydrogenase; Provisional
Probab=95.47 E-value=0.078 Score=44.67 Aligned_cols=73 Identities=25% Similarity=0.367 Sum_probs=49.2
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCE-EeeCCCCcccc----------cCCCccE
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-AIDYTKENIED----------LPEKFDV 217 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~----------~~~~~dv 217 (310)
++.+++|+|++|.+|...++.+... |++++++.+++++.+.+ ++++... .+..+-.+..+ ...++|+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAE-GARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4679999999999999988877774 99999999887766554 4455332 22211111111 1236899
Q ss_pred EEeCCC
Q 021628 218 VFDAVG 223 (310)
Q Consensus 218 vi~~~g 223 (310)
+|+++|
T Consensus 84 vi~~ag 89 (249)
T PRK06500 84 VFINAG 89 (249)
T ss_pred EEECCC
Confidence 998876
No 218
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=95.42 E-value=0.24 Score=42.21 Aligned_cols=95 Identities=21% Similarity=0.225 Sum_probs=65.9
Q ss_pred HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCC
Q 021628 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAV 222 (310)
Q Consensus 143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~ 222 (310)
+.....+++++||=+| +|. |..+..+++...+.+++.++.++...+.+++.+.+.+. .+-.++. ....+|+|+...
T Consensus 22 l~~l~~~~~~~vLDlG-cG~-G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~~~~~~~~~-~d~~~~~-~~~~fD~v~~~~ 97 (255)
T PRK14103 22 LARVGAERARRVVDLG-CGP-GNLTRYLARRWPGAVIEALDSSPEMVAAARERGVDART-GDVRDWK-PKPDTDVVVSNA 97 (255)
T ss_pred HHhCCCCCCCEEEEEc-CCC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHhcCCcEEE-cChhhCC-CCCCceEEEEeh
Confidence 3455667889999998 444 77888888763357899999999988888776554332 2222221 134799998764
Q ss_pred C-----C----hHHHHhhcccCCEEEEE
Q 021628 223 G-----Q----CDKALKAVKEGGRVVSI 241 (310)
Q Consensus 223 g-----~----~~~~~~~l~~~G~~v~~ 241 (310)
. . +..+.+.|+|||+++..
T Consensus 98 ~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 98 ALQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred hhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 3 2 36778889999999865
No 219
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.36 E-value=0.19 Score=44.53 Aligned_cols=93 Identities=12% Similarity=0.148 Sum_probs=60.4
Q ss_pred ccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HH----cCCCEEeeCCCCcccccCCCccEEEe
Q 021628 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RS----LGADLAIDYTKENIEDLPEKFDVVFD 220 (310)
Q Consensus 147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~----~g~~~~~~~~~~~~~~~~~~~dvvi~ 220 (310)
..+...+++|+| +|..|.+.+..+....+. ++.+..+++++.+.+ ++ ++.... .. ++..+....+|+|+.
T Consensus 123 a~~~~~~v~iiG-aG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~--~~~~~~~~~aDiVi~ 198 (325)
T PRK08618 123 AREDAKTLCLIG-TGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VV--NSADEAIEEADIIVT 198 (325)
T ss_pred cCCCCcEEEEEC-CcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-Ee--CCHHHHHhcCCEEEE
Confidence 334567899999 999998776544322365 566778888887655 32 233211 11 122333467999999
Q ss_pred CCCC--hHHHHhhcccCCEEEEEeCC
Q 021628 221 AVGQ--CDKALKAVKEGGRVVSIIGS 244 (310)
Q Consensus 221 ~~g~--~~~~~~~l~~~G~~v~~g~~ 244 (310)
|+++ +.-. +++++|-.++.+|.+
T Consensus 199 aT~s~~p~i~-~~l~~G~hV~~iGs~ 223 (325)
T PRK08618 199 VTNAKTPVFS-EKLKKGVHINAVGSF 223 (325)
T ss_pred ccCCCCcchH-HhcCCCcEEEecCCC
Confidence 9874 3334 889998888888764
No 220
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.36 E-value=0.086 Score=45.38 Aligned_cols=37 Identities=22% Similarity=0.206 Sum_probs=29.8
Q ss_pred CCCEEEEEcCCc--chHHHHHHHHHhhcCCcEEEEecChh
Q 021628 150 AGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSSTA 187 (310)
Q Consensus 150 ~g~~vlI~g~~g--~~G~~a~~la~~~~g~~vi~~~~~~~ 187 (310)
.++++||+|+++ ++|.+.++.+... |++|++..++++
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~-Ga~V~~~~r~~~ 44 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQ-GAELAFTYQGEA 44 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhC-CCEEEEecCchH
Confidence 468999999875 9999987766664 999998887653
No 221
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.34 E-value=0.058 Score=45.71 Aligned_cols=41 Identities=24% Similarity=0.420 Sum_probs=34.6
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
|.+++|+|+++++|...++.+... |++|+++.+++++.+.+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~ 41 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEE-GANVVITGRTKEKLEEA 41 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 468999999999999988887774 99999999988766554
No 222
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.32 E-value=0.083 Score=45.40 Aligned_cols=41 Identities=34% Similarity=0.602 Sum_probs=34.2
Q ss_pred CCCEEEEEcCCcchHHH-HHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTM-VIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~-a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.|..|+|+|+++++|.+ |.++++. |++++.+++..++++.+
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~--G~~l~lvar~~rrl~~v 52 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKR--GAKLVLVARRARRLERV 52 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhC--CCceEEeehhhhhHHHH
Confidence 57899999999999977 5556664 99999999988887776
No 223
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=95.31 E-value=0.16 Score=40.96 Aligned_cols=110 Identities=17% Similarity=0.151 Sum_probs=71.4
Q ss_pred ccccchHHHHHHHHHhccc----------CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCE
Q 021628 130 ASLPLATETAYEGLERSAF----------SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL 199 (310)
Q Consensus 130 a~~~~~~~ta~~al~~~~~----------~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~ 199 (310)
..+||.....+..++..++ -.|++|+|.|.+..+|.=...++... ++.|++++.+.-.. ...-+ .
T Consensus 31 ~~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~-~AtVti~~~~~~~~--~~~~~--~ 105 (197)
T cd01079 31 SILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLAND-GARVYSVDINGIQV--FTRGE--S 105 (197)
T ss_pred CccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHC-CCEEEEEecCcccc--ccccc--c
Confidence 3456665555555554433 57999999999999999888888874 99999886542111 00000 0
Q ss_pred EeeCCC--Cc----ccccCCCccEEEeCCCChHH--HHhhcccCCEEEEEeCC
Q 021628 200 AIDYTK--EN----IEDLPEKFDVVFDAVGQCDK--ALKAVKEGGRVVSIIGS 244 (310)
Q Consensus 200 ~~~~~~--~~----~~~~~~~~dvvi~~~g~~~~--~~~~l~~~G~~v~~g~~ 244 (310)
.-++.. .+ ..+..+.+|+||.++|..+. --+++++|..++.+|..
T Consensus 106 ~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~~~~i~~d~ik~GavVIDVGi~ 158 (197)
T cd01079 106 IRHEKHHVTDEEAMTLDCLSQSDVVITGVPSPNYKVPTELLKDGAICINFASI 158 (197)
T ss_pred cccccccccchhhHHHHHhhhCCEEEEccCCCCCccCHHHcCCCcEEEEcCCC
Confidence 000110 11 23445789999999996543 56789999999999853
No 224
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.29 E-value=0.061 Score=45.59 Aligned_cols=42 Identities=29% Similarity=0.382 Sum_probs=35.6
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|+++++|.+.+..+... |++|+++.+++++.+.+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~ 49 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEA-GAQVAIAARHLDALEKL 49 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHH
Confidence 4789999999999999988877774 99999999988776555
No 225
>PRK06180 short chain dehydrogenase; Provisional
Probab=95.29 E-value=0.091 Score=45.26 Aligned_cols=44 Identities=25% Similarity=0.266 Sum_probs=37.0
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS 194 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~ 194 (310)
.+.+++|+|++|.+|.+.++.+... |.+|+++++++++.+.+.+
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~l~~ 46 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAA-GHRVVGTVRSEAARADFEA 46 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhC-cCEEEEEeCCHHHHHHHHh
Confidence 3578999999999999988877774 9999999999888776654
No 226
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.29 E-value=0.063 Score=45.52 Aligned_cols=72 Identities=24% Similarity=0.344 Sum_probs=48.2
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC-EEe--eCCCC-cccc-cCCCccEEEeC
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAI--DYTKE-NIED-LPEKFDVVFDA 221 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~--~~~~~-~~~~-~~~~~dvvi~~ 221 (310)
+.+++|+|++|.+|...++.+... |++|+++++++++.+.+.+ .+.. .++ +..+. .... ...++|++|++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ 80 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARK-GHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN 80 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence 458999999999999998888874 9999999998776655432 2322 121 22221 1111 12379999998
Q ss_pred CC
Q 021628 222 VG 223 (310)
Q Consensus 222 ~g 223 (310)
+|
T Consensus 81 ag 82 (257)
T PRK09291 81 AG 82 (257)
T ss_pred CC
Confidence 76
No 227
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.27 E-value=0.098 Score=45.04 Aligned_cols=95 Identities=25% Similarity=0.263 Sum_probs=65.4
Q ss_pred cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (310)
Q Consensus 131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (310)
..||+.......++..++ -.|.+|+|.|.+..+|.-.+.++... |+.|+++-.....+ .
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~-gAtVtv~hs~t~~l-------------------~ 195 (285)
T PRK14191 136 FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNA-GASVSVCHILTKDL-------------------S 195 (285)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-CCEEEEEeCCcHHH-------------------H
Confidence 456665555555555554 36999999997779999999988875 99888774432222 2
Q ss_pred ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628 210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~ 245 (310)
+..+.+|+|+.++|... -.-++++++..++.+|...
T Consensus 196 ~~~~~ADIvV~AvG~p~~i~~~~vk~GavVIDvGi~~ 232 (285)
T PRK14191 196 FYTQNADIVCVGVGKPDLIKASMVKKGAVVVDIGINR 232 (285)
T ss_pred HHHHhCCEEEEecCCCCcCCHHHcCCCcEEEEeeccc
Confidence 22356889999998532 2235678999999998543
No 228
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=95.25 E-value=0.12 Score=45.44 Aligned_cols=87 Identities=18% Similarity=0.249 Sum_probs=58.5
Q ss_pred CEEEEEcCCcchHHHHHHHHHhhcCC--cEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC--h--
Q 021628 152 KSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--C-- 225 (310)
Q Consensus 152 ~~vlI~g~~g~~G~~a~~la~~~~g~--~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~--~-- 225 (310)
.+|.|+| .|.+|...+..++.. |. +|++.++++++.+.+++.|...... .+..+...++|+||.|++. .
T Consensus 7 ~~I~IIG-~G~mG~sla~~l~~~-g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~~~~~~~~aDvViiavp~~~~~~ 81 (307)
T PRK07502 7 DRVALIG-IGLIGSSLARAIRRL-GLAGEIVGADRSAETRARARELGLGDRVT---TSAAEAVKGADLVILCVPVGASGA 81 (307)
T ss_pred cEEEEEe-eCHHHHHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhCCCCceec---CCHHHHhcCCCEEEECCCHHHHHH
Confidence 5799999 999999888777764 63 7888899999888888877422111 1122234578999999873 1
Q ss_pred --HHHHhhcccCCEEEEEeC
Q 021628 226 --DKALKAVKEGGRVVSIIG 243 (310)
Q Consensus 226 --~~~~~~l~~~G~~v~~g~ 243 (310)
+.....++++..++.++.
T Consensus 82 v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 82 VAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHHHHhhCCCCCEEEeCcc
Confidence 233345666666666543
No 229
>PRK07831 short chain dehydrogenase; Provisional
Probab=95.25 E-value=0.098 Score=44.57 Aligned_cols=44 Identities=32% Similarity=0.422 Sum_probs=35.6
Q ss_pred cCCCCEEEEEcCCc-chHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 148 FSAGKSILVLGGAG-GVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 148 ~~~g~~vlI~g~~g-~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
...+++++|+|++| ++|.+.++.+... |++|+++++++++++..
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~-G~~V~~~~~~~~~~~~~ 58 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEE-GARVVISDIHERRLGET 58 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 34578999999876 8999999888875 99999988887766544
No 230
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=95.22 E-value=0.11 Score=43.58 Aligned_cols=98 Identities=22% Similarity=0.302 Sum_probs=59.7
Q ss_pred HhcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHH----cCCC--EEeeCCCCcccccCCCcc
Q 021628 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKFD 216 (310)
Q Consensus 144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~d 216 (310)
+....++|++||=.+ .+.|..+..+++... ..+|+.++-+++-++.+++ .+.. ..+..+.+++....+.+|
T Consensus 41 ~~~~~~~g~~vLDv~--~GtG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~lp~~d~sfD 118 (233)
T PF01209_consen 41 KLLGLRPGDRVLDVA--CGTGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDLPFPDNSFD 118 (233)
T ss_dssp HHHT--S--EEEEET---TTSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB--S-TT-EE
T ss_pred hccCCCCCCEEEEeC--CChHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHhcCCCCcee
Confidence 445778899888886 566888888888752 2588999999998888753 2221 123333334333346799
Q ss_pred EEEeCCC-----C----hHHHHhhcccCCEEEEEeC
Q 021628 217 VVFDAVG-----Q----CDKALKAVKEGGRVVSIIG 243 (310)
Q Consensus 217 vvi~~~g-----~----~~~~~~~l~~~G~~v~~g~ 243 (310)
+|..+.| + +.+..+.|+|||+++.+..
T Consensus 119 ~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~ 154 (233)
T PF01209_consen 119 AVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEF 154 (233)
T ss_dssp EEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeec
Confidence 9998777 1 3789999999999987753
No 231
>PRK08265 short chain dehydrogenase; Provisional
Probab=95.21 E-value=0.11 Score=44.36 Aligned_cols=73 Identities=27% Similarity=0.323 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCE-Ee--eCCCC-cccc-------cCCCccE
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-AI--DYTKE-NIED-------LPEKFDV 217 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-~~--~~~~~-~~~~-------~~~~~dv 217 (310)
.+.+++|+|+++.+|...+..+... |++|+++++++++.+.+ ++++... .+ |..++ +... ....+|+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAA-GARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4679999999999999988877764 99999999988766555 4444221 22 22211 1111 1236899
Q ss_pred EEeCCC
Q 021628 218 VFDAVG 223 (310)
Q Consensus 218 vi~~~g 223 (310)
+|+++|
T Consensus 84 lv~~ag 89 (261)
T PRK08265 84 LVNLAC 89 (261)
T ss_pred EEECCC
Confidence 998876
No 232
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=95.17 E-value=0.33 Score=41.59 Aligned_cols=97 Identities=21% Similarity=0.219 Sum_probs=64.1
Q ss_pred HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcC--CcEEEEecChhhHHHHHHc-C------CC--EEeeCCCCcccccC
Q 021628 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRSL-G------AD--LAIDYTKENIEDLP 212 (310)
Q Consensus 144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g--~~vi~~~~~~~~~~~~~~~-g------~~--~~~~~~~~~~~~~~ 212 (310)
+...++++++||-+| +| .|..+..+++.. + .+++.++.+++-++.+++. . .. ..+..+.+++....
T Consensus 67 ~~~~~~~~~~VLDlG-cG-tG~~~~~la~~~-~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~lp~~~ 143 (261)
T PLN02233 67 SWSGAKMGDRVLDLC-CG-SGDLAFLLSEKV-GSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATDLPFDD 143 (261)
T ss_pred HHhCCCCCCEEEEEC-Cc-CCHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcccccCCCCC
Confidence 445778899999998 33 356777777763 4 4899999999988877532 1 11 12222222322223
Q ss_pred CCccEEEeCCC-----C----hHHHHhhcccCCEEEEEeC
Q 021628 213 EKFDVVFDAVG-----Q----CDKALKAVKEGGRVVSIIG 243 (310)
Q Consensus 213 ~~~dvvi~~~g-----~----~~~~~~~l~~~G~~v~~g~ 243 (310)
+.+|.|+...+ + +.++.+.|+|||+++....
T Consensus 144 ~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~ 183 (261)
T PLN02233 144 CYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDF 183 (261)
T ss_pred CCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEEC
Confidence 46999986543 1 3788899999999988754
No 233
>PRK07806 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.27 Score=41.38 Aligned_cols=36 Identities=28% Similarity=0.436 Sum_probs=30.5
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST 186 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~ 186 (310)
.+.+++|+|++|.+|...+..+... |.+|+++.++.
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~-G~~V~~~~r~~ 40 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGA-GAHVVVNYRQK 40 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHC-CCEEEEEeCCc
Confidence 4679999999999999988877774 89999888864
No 234
>PLN02244 tocopherol O-methyltransferase
Probab=95.14 E-value=0.33 Score=43.31 Aligned_cols=92 Identities=21% Similarity=0.230 Sum_probs=62.0
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC---EEeeCCCCcccccCCCccEEEeC
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIEDLPEKFDVVFDA 221 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~dvvi~~ 221 (310)
+++++||=+| + +.|..+..+++.. +++|+.++.+++..+.+++ .+.. .+...+..+.....+.+|+|+..
T Consensus 117 ~~~~~VLDiG-C-G~G~~~~~La~~~-g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~~~~~~~FD~V~s~ 193 (340)
T PLN02244 117 KRPKRIVDVG-C-GIGGSSRYLARKY-GANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQPFEDGQFDLVWSM 193 (340)
T ss_pred CCCCeEEEec-C-CCCHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccCCCCCCCccEEEEC
Confidence 7889999888 4 4577888888874 8899999999987766643 2321 12222222222223579999865
Q ss_pred CC-----C----hHHHHhhcccCCEEEEEeC
Q 021628 222 VG-----Q----CDKALKAVKEGGRVVSIIG 243 (310)
Q Consensus 222 ~g-----~----~~~~~~~l~~~G~~v~~g~ 243 (310)
.. + +.++.+.|+|||+++....
T Consensus 194 ~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~ 224 (340)
T PLN02244 194 ESGEHMPDKRKFVQELARVAAPGGRIIIVTW 224 (340)
T ss_pred CchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 32 1 2678899999999998653
No 235
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.11 E-value=0.37 Score=41.06 Aligned_cols=95 Identities=20% Similarity=0.250 Sum_probs=64.2
Q ss_pred HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCC-EEeeCCCCcccccCCCccEEEeCC
Q 021628 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD-LAIDYTKENIEDLPEKFDVVFDAV 222 (310)
Q Consensus 144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~dvvi~~~ 222 (310)
....++++++||=+| + +.|..+..+++...+.+++.++.+++..+.+++.... .+...+-..+. ....+|+|+...
T Consensus 25 ~~~~~~~~~~vLDiG-c-G~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~ 101 (258)
T PRK01683 25 ARVPLENPRYVVDLG-C-GPGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEADIASWQ-PPQALDLIFANA 101 (258)
T ss_pred hhCCCcCCCEEEEEc-c-cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECchhccC-CCCCccEEEEcc
Confidence 445667889999998 3 3577788888764357899999999988887654321 22222222211 124789998664
Q ss_pred C-----C----hHHHHhhcccCCEEEEE
Q 021628 223 G-----Q----CDKALKAVKEGGRVVSI 241 (310)
Q Consensus 223 g-----~----~~~~~~~l~~~G~~v~~ 241 (310)
. . +..+.+.|+++|+++..
T Consensus 102 ~l~~~~d~~~~l~~~~~~LkpgG~~~~~ 129 (258)
T PRK01683 102 SLQWLPDHLELFPRLVSLLAPGGVLAVQ 129 (258)
T ss_pred ChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence 3 1 36788899999999875
No 236
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.06 E-value=0.13 Score=43.61 Aligned_cols=42 Identities=31% Similarity=0.504 Sum_probs=35.1
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|+++++|...+..+... |++|+++++++++++.+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~ 46 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFARE-GAKVVVGARRQAELDQL 46 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 3679999999999999988877664 99999999988876654
No 237
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=95.05 E-value=0.1 Score=37.74 Aligned_cols=85 Identities=21% Similarity=0.364 Sum_probs=54.6
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCCh---H
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC---D 226 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~---~ 226 (310)
.|.+|+|.| .|.+|..-++.+... |++++++.... +..++. .+ .....+.....++++|+.+.++. +
T Consensus 6 ~~~~vlVvG-gG~va~~k~~~Ll~~-gA~v~vis~~~---~~~~~~-i~----~~~~~~~~~l~~~~lV~~at~d~~~n~ 75 (103)
T PF13241_consen 6 KGKRVLVVG-GGPVAARKARLLLEA-GAKVTVISPEI---EFSEGL-IQ----LIRREFEEDLDGADLVFAATDDPELNE 75 (103)
T ss_dssp TT-EEEEEE-ESHHHHHHHHHHCCC-TBEEEEEESSE---HHHHTS-CE----EEESS-GGGCTTESEEEE-SS-HHHHH
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEECCch---hhhhhH-HH----HHhhhHHHHHhhheEEEecCCCHHHHH
Confidence 578999999 799999988888884 99999998875 222211 11 11122233456899999998853 4
Q ss_pred HHHhhcccCCEEEEEeCC
Q 021628 227 KALKAVKEGGRVVSIIGS 244 (310)
Q Consensus 227 ~~~~~l~~~G~~v~~g~~ 244 (310)
...+..+..|.++...-.
T Consensus 76 ~i~~~a~~~~i~vn~~D~ 93 (103)
T PF13241_consen 76 AIYADARARGILVNVVDD 93 (103)
T ss_dssp HHHHHHHHTTSEEEETT-
T ss_pred HHHHHHhhCCEEEEECCC
Confidence 555666667888777543
No 238
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.05 E-value=0.12 Score=43.52 Aligned_cols=73 Identities=26% Similarity=0.358 Sum_probs=46.0
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh--HHHHHHcCCC-EEeeCCCCcccc----------cCCCcc
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK--LDLLRSLGAD-LAIDYTKENIED----------LPEKFD 216 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~--~~~~~~~g~~-~~~~~~~~~~~~----------~~~~~d 216 (310)
.|.+++|+|++|.+|...+..+... |++|+++.+++.. .+.+++.+.. ..+..+-.+..+ ...++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~-G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEA-GADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4789999999999999988877764 9999998886521 2333444432 122211111111 124689
Q ss_pred EEEeCCC
Q 021628 217 VVFDAVG 223 (310)
Q Consensus 217 vvi~~~g 223 (310)
++|+++|
T Consensus 83 ~li~~ag 89 (248)
T TIGR01832 83 ILVNNAG 89 (248)
T ss_pred EEEECCC
Confidence 9998875
No 239
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.04 E-value=0.11 Score=44.33 Aligned_cols=42 Identities=26% Similarity=0.479 Sum_probs=35.5
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
++.+++|+|++|.+|...+..+... |++|+++++++++.+.+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~-G~~V~~~~r~~~~~~~~ 45 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAA-GARLLLVGRNAEKLEAL 45 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence 4678999999999999888877764 99999999988876655
No 240
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.03 E-value=0.31 Score=42.08 Aligned_cols=95 Identities=24% Similarity=0.266 Sum_probs=65.7
Q ss_pred cccchHHHHHHHHHhcc-cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628 131 SLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (310)
Q Consensus 131 ~~~~~~~ta~~al~~~~-~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (310)
..||+....+..++... --.|.+|+|.|....+|...+.++... |+.|+++.+....+ .
T Consensus 137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~-gatVtv~~s~t~~l-------------------~ 196 (286)
T PRK14175 137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQK-NASVTILHSRSKDM-------------------A 196 (286)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHC-CCeEEEEeCCchhH-------------------H
Confidence 45766555555555443 347999999996666999999999885 99999887643222 2
Q ss_pred ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628 210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~ 245 (310)
+..+.+|+||.++|... -.-++++++..++.+|...
T Consensus 197 ~~~~~ADIVIsAvg~p~~i~~~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 197 SYLKDADVIVSAVGKPGLVTKDVVKEGAVIIDVGNTP 233 (286)
T ss_pred HHHhhCCEEEECCCCCcccCHHHcCCCcEEEEcCCCc
Confidence 22457899999998531 1114678888888888654
No 241
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.00 E-value=0.067 Score=52.06 Aligned_cols=73 Identities=21% Similarity=0.407 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh---------------------hHHHHHHcCCCEEeeCCC---
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA---------------------KLDLLRSLGADLAIDYTK--- 205 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~---------------------~~~~~~~~g~~~~~~~~~--- 205 (310)
.+++|+|+| +|+.|+.++..++.. |.+|+++.+.+. +.+.++++|.+..++..-
T Consensus 309 ~~kkVaIIG-~GpaGl~aA~~L~~~-G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 386 (639)
T PRK12809 309 RSEKVAVIG-AGPAGLGCADILARA-GVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRD 386 (639)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHc-CCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCc
Confidence 489999999 899999999998885 999999887652 456667788776555421
Q ss_pred CcccccCCCccEEEeCCCC
Q 021628 206 ENIEDLPEKFDVVFDAVGQ 224 (310)
Q Consensus 206 ~~~~~~~~~~dvvi~~~g~ 224 (310)
..+.....++|.||.++|+
T Consensus 387 ~~~~~l~~~~DaV~latGa 405 (639)
T PRK12809 387 ITFSDLTSEYDAVFIGVGT 405 (639)
T ss_pred CCHHHHHhcCCEEEEeCCC
Confidence 1222334579999999884
No 242
>PRK08017 oxidoreductase; Provisional
Probab=95.00 E-value=0.069 Score=45.22 Aligned_cols=71 Identities=23% Similarity=0.378 Sum_probs=50.0
Q ss_pred CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCCCc-c----ccc----CCCccEEEeC
Q 021628 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKEN-I----EDL----PEKFDVVFDA 221 (310)
Q Consensus 152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~~-~----~~~----~~~~dvvi~~ 221 (310)
++++|+|++|.+|...++.+... |.+|+++.+++++.+.+++.+...+ .+..+.. . ... ...+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRR-GYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 57999999999999999888875 9999999999988887776665433 2222211 0 111 1357888877
Q ss_pred CC
Q 021628 222 VG 223 (310)
Q Consensus 222 ~g 223 (310)
.|
T Consensus 82 ag 83 (256)
T PRK08017 82 AG 83 (256)
T ss_pred CC
Confidence 65
No 243
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=94.99 E-value=0.13 Score=45.47 Aligned_cols=42 Identities=19% Similarity=0.291 Sum_probs=35.2
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|++|++|...+..+... |++|+++++++++.+.+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~-G~~V~~~~r~~~~~~~~ 46 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKR-GWHVIMACRNLKKAEAA 46 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence 4678999999999999988877664 89999999988876554
No 244
>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B.
Probab=94.99 E-value=0.017 Score=29.16 Aligned_cols=22 Identities=36% Similarity=0.502 Sum_probs=15.1
Q ss_pred CEEEEEcccCCCccceEEeccccCCCC
Q 021628 1 MKAWVYKEYGNSQSVLKFETNVEVPSL 27 (310)
Q Consensus 1 mka~~~~~~g~~~~~l~~~~~~~~~~~ 27 (310)
|||++|.++++. +++ ++|.|.+
T Consensus 1 MkAv~y~G~~~v----~ve-~VpdP~I 22 (23)
T PF13823_consen 1 MKAVVYHGPKDV----RVE-EVPDPKI 22 (23)
T ss_dssp -EEEEEEETTEE----EEE-EE----S
T ss_pred CcceEEeCCCce----EEE-ECCCccc
Confidence 999999999987 888 8888864
No 245
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.99 E-value=0.15 Score=44.00 Aligned_cols=73 Identities=21% Similarity=0.274 Sum_probs=45.2
Q ss_pred CCCEEEEEcCC--cchHHHHHHHHHhhcCCcEEEEecChh---hHHHH-HHcCCCEEeeCCCCcccc----------cCC
Q 021628 150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTA---KLDLL-RSLGADLAIDYTKENIED----------LPE 213 (310)
Q Consensus 150 ~g~~vlI~g~~--g~~G~~a~~la~~~~g~~vi~~~~~~~---~~~~~-~~~g~~~~~~~~~~~~~~----------~~~ 213 (310)
.+++++|+|++ +++|.+.++.+... |++|+++.++++ +.+.+ ++++....+..+-.+..+ ...
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g 82 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQ-GAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG 82 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHC-CCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 47899999976 79999988766664 999999888742 33333 344533332221111111 124
Q ss_pred CccEEEeCCC
Q 021628 214 KFDVVFDAVG 223 (310)
Q Consensus 214 ~~dvvi~~~g 223 (310)
.+|++|+++|
T Consensus 83 ~iDilVnnAG 92 (274)
T PRK08415 83 KIDFIVHSVA 92 (274)
T ss_pred CCCEEEECCc
Confidence 6889888876
No 246
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.96 E-value=0.024 Score=52.67 Aligned_cols=82 Identities=26% Similarity=0.389 Sum_probs=58.4
Q ss_pred hcccCCCCEEE----EEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCcc-EEE
Q 021628 145 RSAFSAGKSIL----VLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFD-VVF 219 (310)
Q Consensus 145 ~~~~~~g~~vl----I~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d-vvi 219 (310)
..+.++|++++ |+|++|++|.+++++++.. |++|+.+.+.+++....+.. +++ +++
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~------------------~~~~~~~ 88 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGL-GYDVVANNDGGLTWAAGWGD------------------RFGALVF 88 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhC-CCeeeecCccccccccCcCC------------------cccEEEE
Confidence 56778999988 8888999999999999996 99999887665533222111 222 444
Q ss_pred eCCC------------ChHHHHhhcccCCEEEEEeCCC
Q 021628 220 DAVG------------QCDKALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 220 ~~~g------------~~~~~~~~l~~~G~~v~~g~~~ 245 (310)
|..+ .....++.|.++|+++.++...
T Consensus 89 d~~~~~~~~~l~~~~~~~~~~l~~l~~~griv~i~s~~ 126 (450)
T PRK08261 89 DATGITDPADLKALYEFFHPVLRSLAPCGRVVVLGRPP 126 (450)
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHhccCCCEEEEEcccc
Confidence 5443 1256678889999999987543
No 247
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.96 E-value=0.21 Score=43.09 Aligned_cols=95 Identities=18% Similarity=0.219 Sum_probs=66.7
Q ss_pred ccccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcc
Q 021628 130 ASLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI 208 (310)
Q Consensus 130 a~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 208 (310)
...||+....+..++..++ -.|.+|+|.|.+..+|.-.+.++... ++.|+++...-.. +
T Consensus 142 ~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~-~atVtv~hs~T~~-------------------l 201 (287)
T PRK14176 142 GLVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNR-NATVSVCHVFTDD-------------------L 201 (287)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHC-CCEEEEEeccCCC-------------------H
Confidence 3457666555555665554 47999999998888999999998885 8888777643222 2
Q ss_pred cccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCC
Q 021628 209 EDLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGS 244 (310)
Q Consensus 209 ~~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~ 244 (310)
.+..+.+|+++.++|.+. -.-++++++..++.+|..
T Consensus 202 ~~~~~~ADIvv~AvG~p~~i~~~~vk~gavVIDvGin 238 (287)
T PRK14176 202 KKYTLDADILVVATGVKHLIKADMVKEGAVIFDVGIT 238 (287)
T ss_pred HHHHhhCCEEEEccCCccccCHHHcCCCcEEEEeccc
Confidence 223457889999998431 233578889999999853
No 248
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=94.96 E-value=0.11 Score=45.69 Aligned_cols=101 Identities=21% Similarity=0.258 Sum_probs=69.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----- 224 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~----- 224 (310)
.|.+|.|+| .|.+|...+..++. +|.+|+..++..... +.+.. ..++.+.....|+|.-+.+.
T Consensus 144 ~gktvGIiG-~G~IG~~vA~~~~~-fgm~V~~~d~~~~~~----~~~~~------~~~l~ell~~sDvv~lh~Plt~~T~ 211 (311)
T PRK08410 144 KGKKWGIIG-LGTIGKRVAKIAQA-FGAKVVYYSTSGKNK----NEEYE------RVSLEELLKTSDIISIHAPLNEKTK 211 (311)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhh-cCCEEEEECCCcccc----ccCce------eecHHHHhhcCCEEEEeCCCCchhh
Confidence 588999999 99999999999998 599999998753221 11111 11344455678888877651
Q ss_pred -h--HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628 225 -C--DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK 274 (310)
Q Consensus 225 -~--~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (310)
+ ...++.|+++..+|.++.-. -=+-+.+++.+++|++.
T Consensus 212 ~li~~~~~~~Mk~~a~lIN~aRG~------------vVDe~AL~~AL~~g~i~ 252 (311)
T PRK08410 212 NLIAYKELKLLKDGAILINVGRGG------------IVNEKDLAKALDEKDIY 252 (311)
T ss_pred cccCHHHHHhCCCCeEEEECCCcc------------ccCHHHHHHHHHcCCeE
Confidence 1 68889999999999886311 01234566667777765
No 249
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=94.96 E-value=0.24 Score=39.05 Aligned_cols=104 Identities=19% Similarity=0.265 Sum_probs=64.6
Q ss_pred CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCCh---HH-
Q 021628 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC---DK- 227 (310)
Q Consensus 152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~---~~- 227 (310)
.+|.++| .|.+|...+.-+... |.+|++.++++++.+.+.+.|... .+ +..+..+.+|+||-|..+. +.
T Consensus 2 ~~Ig~IG-lG~mG~~~a~~L~~~-g~~v~~~d~~~~~~~~~~~~g~~~-~~----s~~e~~~~~dvvi~~v~~~~~v~~v 74 (163)
T PF03446_consen 2 MKIGFIG-LGNMGSAMARNLAKA-GYEVTVYDRSPEKAEALAEAGAEV-AD----SPAEAAEQADVVILCVPDDDAVEAV 74 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHT-TTEEEEEESSHHHHHHHHHTTEEE-ES----SHHHHHHHBSEEEE-SSSHHHHHHH
T ss_pred CEEEEEc-hHHHHHHHHHHHHhc-CCeEEeeccchhhhhhhHHhhhhh-hh----hhhhHhhcccceEeecccchhhhhh
Confidence 3688999 899998866665553 899999999999999988777322 11 2233345679999998742 22
Q ss_pred -----HHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628 228 -----ALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK 274 (310)
Q Consensus 228 -----~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (310)
.+..+.++..++.++. ...+..+++.+.+.+....
T Consensus 75 ~~~~~i~~~l~~g~iiid~sT------------~~p~~~~~~~~~~~~~g~~ 114 (163)
T PF03446_consen 75 LFGENILAGLRPGKIIIDMST------------ISPETSRELAERLAAKGVR 114 (163)
T ss_dssp HHCTTHGGGS-TTEEEEE-SS--------------HHHHHHHHHHHHHTTEE
T ss_pred hhhhHHhhccccceEEEecCC------------cchhhhhhhhhhhhhccce
Confidence 4566677777777652 3455555666666554443
No 250
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=94.94 E-value=0.15 Score=44.43 Aligned_cols=91 Identities=24% Similarity=0.257 Sum_probs=57.5
Q ss_pred ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCC-CEEeeCCCCcccccCCCccEEEeC
Q 021628 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA-DLAIDYTKENIEDLPEKFDVVFDA 221 (310)
Q Consensus 147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~-~~~~~~~~~~~~~~~~~~dvvi~~ 221 (310)
-.++|++||=.| .+.|.+++..++. +..+|++++.++...+.+++ -+. +.+.-....+ .....+|+|+-.
T Consensus 158 ~~~~g~~vLDvG--~GSGILaiaA~kl-GA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~--~~~~~~dlvvAN 232 (295)
T PF06325_consen 158 YVKPGKRVLDVG--CGSGILAIAAAKL-GAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSED--LVEGKFDLVVAN 232 (295)
T ss_dssp HSSTTSEEEEES---TTSHHHHHHHHT-TBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSC--TCCS-EEEEEEE
T ss_pred hccCCCEEEEeC--CcHHHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEecc--cccccCCEEEEC
Confidence 367889998888 4568888888885 23468899888886665543 221 1221111111 123689999976
Q ss_pred CC-C-----hHHHHhhcccCCEEEEEe
Q 021628 222 VG-Q-----CDKALKAVKEGGRVVSII 242 (310)
Q Consensus 222 ~g-~-----~~~~~~~l~~~G~~v~~g 242 (310)
.- . .....++++++|.++.-|
T Consensus 233 I~~~vL~~l~~~~~~~l~~~G~lIlSG 259 (295)
T PF06325_consen 233 ILADVLLELAPDIASLLKPGGYLILSG 259 (295)
T ss_dssp S-HHHHHHHHHHCHHHEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhhCCCCEEEEcc
Confidence 53 2 256678899999999887
No 251
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=94.93 E-value=0.14 Score=43.57 Aligned_cols=39 Identities=23% Similarity=0.318 Sum_probs=32.4
Q ss_pred EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
+++|+|+++++|.+.++.+... |++|+++.+++++++.+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~ 40 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKK-GARVVISSRNEENLEKA 40 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 6899999999999988776664 99999999988776544
No 252
>PRK06841 short chain dehydrogenase; Provisional
Probab=94.92 E-value=0.12 Score=43.64 Aligned_cols=45 Identities=29% Similarity=0.427 Sum_probs=36.0
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL 195 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~ 195 (310)
.+.+++|+|++|.+|...++.+... |++|+++.++++..+...++
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~-G~~Vi~~~r~~~~~~~~~~~ 58 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAK-GARVALLDRSEDVAEVAAQL 58 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHh
Confidence 4679999999999999988877764 99999999987765555444
No 253
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=94.88 E-value=0.075 Score=42.24 Aligned_cols=90 Identities=28% Similarity=0.405 Sum_probs=63.5
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeC-CCC----cc----------------c
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY-TKE----NI----------------E 209 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~-~~~----~~----------------~ 209 (310)
.-+|+|+| +|.+|..|+.+++.+ |+++++.+...++++..+..+...+... .+. ++ .
T Consensus 20 p~~vvv~G-~G~vg~gA~~~~~~l-Ga~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 20 PAKVVVTG-AGRVGQGAAEIAKGL-GAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHT-T-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CeEEEEEC-CCHHHHHHHHHHhHC-CCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 36899999 999999999999997 9999999999999988888776544321 110 01 0
Q ss_pred ccCCCccEEEeCC---CC------hHHHHhhcccCCEEEEEe
Q 021628 210 DLPEKFDVVFDAV---GQ------CDKALKAVKEGGRVVSII 242 (310)
Q Consensus 210 ~~~~~~dvvi~~~---g~------~~~~~~~l~~~G~~v~~g 242 (310)
.....+|++|.+. +. .++.++.|+++..++.++
T Consensus 98 ~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis 139 (168)
T PF01262_consen 98 EFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDIS 139 (168)
T ss_dssp HHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETT
T ss_pred HHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEE
Confidence 1123679988643 21 278889999998888884
No 254
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=94.87 E-value=0.081 Score=49.41 Aligned_cols=74 Identities=24% Similarity=0.516 Sum_probs=53.1
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh---------------------hhHHHHHHcCCCEEeeCCC-C
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST---------------------AKLDLLRSLGADLAIDYTK-E 206 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~---------------------~~~~~~~~~g~~~~~~~~~-~ 206 (310)
..+++|+|.| +|+.|+.++..++.. |.+|+++...+ ...+.++++|.+..++... .
T Consensus 139 ~~~~~V~IIG-~GpaGl~aA~~l~~~-G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~ 216 (467)
T TIGR01318 139 PTGKRVAVIG-AGPAGLACADILARA-GVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGR 216 (467)
T ss_pred CCCCeEEEEC-CCHHHHHHHHHHHHc-CCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCC
Confidence 3678999999 999999999998885 99998887653 2456667888766554321 1
Q ss_pred c--ccccCCCccEEEeCCCC
Q 021628 207 N--IEDLPEKFDVVFDAVGQ 224 (310)
Q Consensus 207 ~--~~~~~~~~dvvi~~~g~ 224 (310)
+ ......++|.||.++|.
T Consensus 217 ~~~~~~~~~~~D~vilAtGa 236 (467)
T TIGR01318 217 DISLDDLLEDYDAVFLGVGT 236 (467)
T ss_pred ccCHHHHHhcCCEEEEEeCC
Confidence 1 11222479999999884
No 255
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.87 E-value=0.11 Score=44.18 Aligned_cols=38 Identities=24% Similarity=0.196 Sum_probs=30.2
Q ss_pred CCCEEEEEcCC--cchHHHHHHHHHhhcCCcEEEEecChhh
Q 021628 150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTAK 188 (310)
Q Consensus 150 ~g~~vlI~g~~--g~~G~~a~~la~~~~g~~vi~~~~~~~~ 188 (310)
.|.+++|+|++ +++|.+.+..+... |++|+++.++++.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~-G~~v~l~~r~~~~ 48 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRAL-GAELAVTYLNDKA 48 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHc-CCEEEEEeCChhh
Confidence 47899999987 48999988766664 9999998887543
No 256
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.85 E-value=0.23 Score=46.18 Aligned_cols=73 Identities=27% Similarity=0.410 Sum_probs=47.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh--hhHHHH-HHcCCCE-EeeCCCCc-ccc-------cCCCccE
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST--AKLDLL-RSLGADL-AIDYTKEN-IED-------LPEKFDV 217 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~--~~~~~~-~~~g~~~-~~~~~~~~-~~~-------~~~~~dv 217 (310)
++.+++|+|++|++|...++.+... |++|+++++++ ++++.+ ++++... ..|..+.+ ... ...++|+
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~-Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARD-GAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 5789999999999999988887774 99999887742 333333 4455332 22322211 110 1236899
Q ss_pred EEeCCC
Q 021628 218 VFDAVG 223 (310)
Q Consensus 218 vi~~~g 223 (310)
+|+++|
T Consensus 288 vi~~AG 293 (450)
T PRK08261 288 VVHNAG 293 (450)
T ss_pred EEECCC
Confidence 999987
No 257
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=94.85 E-value=0.068 Score=46.07 Aligned_cols=43 Identities=28% Similarity=0.436 Sum_probs=37.8
Q ss_pred CCCCEEEEEcCCcchHHH-HHHHHHhhcCCcEEEEecChhhHHHHH
Q 021628 149 SAGKSILVLGGAGGVGTM-VIQLAKHVFGASKVAATSSTAKLDLLR 193 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~-a~~la~~~~g~~vi~~~~~~~~~~~~~ 193 (310)
+-|+|.+|+|++.++|.+ |-++|+. |.+|+++.|+++|++.++
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkr--G~nvvLIsRt~~KL~~v~ 90 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKR--GFNVVLISRTQEKLEAVA 90 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHc--CCEEEEEeCCHHHHHHHH
Confidence 457999999999999976 7778884 999999999999998773
No 258
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=94.85 E-value=0.3 Score=43.39 Aligned_cols=92 Identities=18% Similarity=0.205 Sum_probs=60.3
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC-C--EEeeCCCCcccccCCCccEEEeCCC--
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-D--LAIDYTKENIEDLPEKFDVVFDAVG-- 223 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~-~--~~~~~~~~~~~~~~~~~dvvi~~~g-- 223 (310)
.++++||=+| +|. |..+..+++...+.+++.++.+++.++.+++... . .++..+.++.....+.+|+|+.+..
T Consensus 112 ~~~~~VLDLG-cGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~gD~e~lp~~~~sFDvVIs~~~L~ 189 (340)
T PLN02490 112 DRNLKVVDVG-GGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIEGDAEDLPFPTDYADRYVSAGSIE 189 (340)
T ss_pred CCCCEEEEEe-cCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEeccHHhCCCCCCceeEEEEcChhh
Confidence 5788999998 554 7777788776434688899999888877755321 1 1222222222222346899886532
Q ss_pred ---C----hHHHHhhcccCCEEEEEe
Q 021628 224 ---Q----CDKALKAVKEGGRVVSII 242 (310)
Q Consensus 224 ---~----~~~~~~~l~~~G~~v~~g 242 (310)
+ ++++.+.|+++|+++..+
T Consensus 190 ~~~d~~~~L~e~~rvLkPGG~LvIi~ 215 (340)
T PLN02490 190 YWPDPQRGIKEAYRVLKIGGKACLIG 215 (340)
T ss_pred hCCCHHHHHHHHHHhcCCCcEEEEEE
Confidence 1 368889999999998765
No 259
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=94.85 E-value=0.65 Score=38.79 Aligned_cols=97 Identities=27% Similarity=0.292 Sum_probs=63.0
Q ss_pred HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcC--CcEEEEecChhhHHHHHHcC------C-CEEeeCCCCcccccCCC
Q 021628 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRSLG------A-DLAIDYTKENIEDLPEK 214 (310)
Q Consensus 144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g--~~vi~~~~~~~~~~~~~~~g------~-~~~~~~~~~~~~~~~~~ 214 (310)
......++.+|+-+| +|. |..+..+++.. + .+++.++.+++..+.+++.- . ..+...+..+.......
T Consensus 45 ~~~~~~~~~~vldiG-~G~-G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 121 (239)
T PRK00216 45 KWLGVRPGDKVLDLA-CGT-GDLAIALAKAV-GKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGDAEALPFPDNS 121 (239)
T ss_pred HHhCCCCCCeEEEeC-CCC-CHHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEecccccCCCCCCC
Confidence 344556788999998 666 88888888874 4 78999999988877775531 1 11222221121222346
Q ss_pred ccEEEeCCC-----C----hHHHHhhcccCCEEEEEeC
Q 021628 215 FDVVFDAVG-----Q----CDKALKAVKEGGRVVSIIG 243 (310)
Q Consensus 215 ~dvvi~~~g-----~----~~~~~~~l~~~G~~v~~g~ 243 (310)
+|+|+.... . +..+.+.|+++|+++....
T Consensus 122 ~D~I~~~~~l~~~~~~~~~l~~~~~~L~~gG~li~~~~ 159 (239)
T PRK00216 122 FDAVTIAFGLRNVPDIDKALREMYRVLKPGGRLVILEF 159 (239)
T ss_pred ccEEEEecccccCCCHHHHHHHHHHhccCCcEEEEEEe
Confidence 898875432 1 3677889999999987653
No 260
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=94.84 E-value=0.57 Score=40.16 Aligned_cols=99 Identities=13% Similarity=0.172 Sum_probs=65.1
Q ss_pred HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC--CE--EeeCCCCcccccCCCccE
Q 021628 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA--DL--AIDYTKENIEDLPEKFDV 217 (310)
Q Consensus 142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~--~~--~~~~~~~~~~~~~~~~dv 217 (310)
++...+++++.+||=+| +| .|..+..+++. .+++++.++.+++..+.+++... .. +...+..........+|+
T Consensus 44 ~l~~l~l~~~~~VLDiG-cG-~G~~a~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~~~~~~~~~~FD~ 120 (263)
T PTZ00098 44 ILSDIELNENSKVLDIG-SG-LGGGCKYINEK-YGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDILKKDFPENTFDM 120 (263)
T ss_pred HHHhCCCCCCCEEEEEc-CC-CChhhHHHHhh-cCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCcccCCCCCCCeEE
Confidence 34667889999999998 55 46667777776 48899999999988887765321 11 111111111111246999
Q ss_pred EEeCC-----C--C----hHHHHhhcccCCEEEEEeC
Q 021628 218 VFDAV-----G--Q----CDKALKAVKEGGRVVSIIG 243 (310)
Q Consensus 218 vi~~~-----g--~----~~~~~~~l~~~G~~v~~g~ 243 (310)
|+... + . ++++.+.|+|+|+++....
T Consensus 121 V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 121 IYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred EEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 98631 1 1 2677899999999997754
No 261
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.83 E-value=0.22 Score=42.87 Aligned_cols=94 Identities=19% Similarity=0.169 Sum_probs=66.8
Q ss_pred cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (310)
Q Consensus 131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (310)
..||+....+..++..+. -.|.+|+|.|.+..+|.-..+++... ++.|+++-+.-.. +.
T Consensus 138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~-~atVtv~hs~T~~-------------------l~ 197 (285)
T PRK10792 138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLA-GCTVTVCHRFTKN-------------------LR 197 (285)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHC-CCeEEEEECCCCC-------------------HH
Confidence 457766556666665544 36999999998788999999988885 8988887653222 22
Q ss_pred ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCC
Q 021628 210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGS 244 (310)
Q Consensus 210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~ 244 (310)
+..+.+|++|.++|... -.-++++++..++.+|..
T Consensus 198 ~~~~~ADIvi~avG~p~~v~~~~vk~gavVIDvGin 233 (285)
T PRK10792 198 HHVRNADLLVVAVGKPGFIPGEWIKPGAIVIDVGIN 233 (285)
T ss_pred HHHhhCCEEEEcCCCcccccHHHcCCCcEEEEcccc
Confidence 33457899999998542 222778899999999854
No 262
>PRK07454 short chain dehydrogenase; Provisional
Probab=94.79 E-value=0.19 Score=42.10 Aligned_cols=43 Identities=19% Similarity=0.259 Sum_probs=35.4
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
..+.+++|+|++|.+|...+..+... |.+|+++++++++.+.+
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~ 46 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKA-GWDLALVARSQDALEAL 46 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 34678999999999999988877774 89999999988766554
No 263
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=94.79 E-value=0.11 Score=45.07 Aligned_cols=73 Identities=25% Similarity=0.302 Sum_probs=46.5
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHcC----CCEEeeCCCCcccccCCCccEEEeCC
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLG----ADLAIDYTKENIEDLPEKFDVVFDAV 222 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~g----~~~~~~~~~~~~~~~~~~~dvvi~~~ 222 (310)
..+.+++|+| +|+.+.+++..+..+ |+ +++++.|+.+|.+.+ +++. ...+...+..+.......+|+|+||+
T Consensus 125 ~~~k~vlilG-aGGaarAi~~aL~~~-g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaT 202 (283)
T PRK14027 125 AKLDSVVQVG-AGGVGNAVAYALVTH-GVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNAT 202 (283)
T ss_pred cCCCeEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcC
Confidence 3478999999 899999988877665 76 677888888887666 3332 11111111011111234689999997
Q ss_pred C
Q 021628 223 G 223 (310)
Q Consensus 223 g 223 (310)
+
T Consensus 203 p 203 (283)
T PRK14027 203 P 203 (283)
T ss_pred C
Confidence 5
No 264
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.74 E-value=0.071 Score=48.64 Aligned_cols=73 Identities=27% Similarity=0.416 Sum_probs=47.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCC-EEe--eCCCC-cccccCCCccEEEeCCC
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-LAI--DYTKE-NIEDLPEKFDVVFDAVG 223 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~-~~~--~~~~~-~~~~~~~~~dvvi~~~g 223 (310)
.|++++|+|++|++|.+.+..+... |.+|+++++++++++.. .+.... ..+ |..++ ...+..+++|++|+++|
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~-G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAG 254 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQ-GAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHG 254 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCC
Confidence 4789999999999999988776664 99999999887765432 221111 122 22221 12222357899998765
No 265
>PRK05717 oxidoreductase; Validated
Probab=94.73 E-value=0.17 Score=42.91 Aligned_cols=46 Identities=26% Similarity=0.334 Sum_probs=36.1
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcC
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLG 196 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g 196 (310)
.|.+++|+|++|.+|...+..+... |++|+++++++++.+.+ ++++
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~ 55 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAE-GWQVVLADLDRERGSKVAKALG 55 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHcC
Confidence 4789999999999999988877764 89999998877665544 3444
No 266
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=94.71 E-value=0.28 Score=43.58 Aligned_cols=102 Identities=17% Similarity=0.216 Sum_probs=69.1
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCCh----
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC---- 225 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~---- 225 (310)
.|.+|.|+| .|.+|...+..++.. |.+|++.+++++..... . .. ..++.+....+|+|+.+.+..
T Consensus 145 ~g~~VgIIG-~G~IG~~vA~~L~~~-G~~V~~~d~~~~~~~~~----~----~~-~~~l~ell~~aDiVil~lP~t~~t~ 213 (330)
T PRK12480 145 KNMTVAIIG-TGRIGAATAKIYAGF-GATITAYDAYPNKDLDF----L----TY-KDSVKEAIKDADIISLHVPANKESY 213 (330)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEeCChhHhhhh----h----hc-cCCHHHHHhcCCEEEEeCCCcHHHH
Confidence 567899999 999999999998884 99999999876543211 0 01 112344456789999887731
Q ss_pred ----HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628 226 ----DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK 274 (310)
Q Consensus 226 ----~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (310)
...+..|+++..++.++.-. --+-..+++.+.+|++.
T Consensus 214 ~li~~~~l~~mk~gavlIN~aRG~------------~vd~~aL~~aL~~g~i~ 254 (330)
T PRK12480 214 HLFDKAMFDHVKKGAILVNAARGA------------VINTPDLIAAVNDGTLL 254 (330)
T ss_pred HHHhHHHHhcCCCCcEEEEcCCcc------------ccCHHHHHHHHHcCCee
Confidence 46678888888888876311 11234556666777664
No 267
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=94.71 E-value=0.24 Score=43.64 Aligned_cols=86 Identities=22% Similarity=0.306 Sum_probs=65.6
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC-C---
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG-Q--- 224 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g-~--- 224 (310)
..|++|.|+| .|.+|...++-++. +|..+....+.+.+.+...+.++. ..++.+.....|+++-|.. +
T Consensus 160 ~~gK~vgilG-~G~IG~~ia~rL~~-Fg~~i~y~~r~~~~~~~~~~~~~~------~~d~~~~~~~sD~ivv~~pLt~~T 231 (336)
T KOG0069|consen 160 LEGKTVGILG-LGRIGKAIAKRLKP-FGCVILYHSRTQLPPEEAYEYYAE------FVDIEELLANSDVIVVNCPLTKET 231 (336)
T ss_pred ccCCEEEEec-CcHHHHHHHHhhhh-ccceeeeecccCCchhhHHHhccc------ccCHHHHHhhCCEEEEecCCCHHH
Confidence 3588999999 99999999999998 685555666677777777666654 3355666677888877765 2
Q ss_pred --h--HHHHhhcccCCEEEEEe
Q 021628 225 --C--DKALKAVKEGGRVVSII 242 (310)
Q Consensus 225 --~--~~~~~~l~~~G~~v~~g 242 (310)
+ ...+..|++++.++..+
T Consensus 232 ~~liNk~~~~~mk~g~vlVN~a 253 (336)
T KOG0069|consen 232 RHLINKKFIEKMKDGAVLVNTA 253 (336)
T ss_pred HHHhhHHHHHhcCCCeEEEecc
Confidence 1 68889999999999886
No 268
>PRK07774 short chain dehydrogenase; Provisional
Probab=94.70 E-value=0.13 Score=43.38 Aligned_cols=42 Identities=29% Similarity=0.387 Sum_probs=34.6
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|++|.+|...+..+... |++|+++.+++++.+.+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~-g~~vi~~~r~~~~~~~~ 46 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALARE-GASVVVADINAEGAERV 46 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 4678999999999999988877774 99999999987665444
No 269
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=94.70 E-value=0.18 Score=46.15 Aligned_cols=73 Identities=19% Similarity=0.327 Sum_probs=50.6
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEEeCCCCh
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC 225 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~ 225 (310)
-.+.+|+|+| +|.+|.+++..+... |. +++++.|+.++.+.+ ++++.......+ +.......+|+||+|+++.
T Consensus 179 l~~kkvlviG-aG~~a~~va~~L~~~-g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~--~l~~~l~~aDiVI~aT~a~ 253 (414)
T PRK13940 179 ISSKNVLIIG-AGQTGELLFRHVTAL-APKQIMLANRTIEKAQKITSAFRNASAHYLS--ELPQLIKKADIIIAAVNVL 253 (414)
T ss_pred ccCCEEEEEc-CcHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHhcCCeEecHH--HHHHHhccCCEEEECcCCC
Confidence 4678999999 899999988888775 75 677888888876666 456522222221 2223345799999999853
No 270
>PRK07340 ornithine cyclodeaminase; Validated
Probab=94.70 E-value=0.14 Score=44.95 Aligned_cols=92 Identities=17% Similarity=0.125 Sum_probs=59.8
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHcCCC--EEeeCCCCcccccCCCccEEEeCCCC
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLGAD--LAIDYTKENIEDLPEKFDVVFDAVGQ 224 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~g~~--~~~~~~~~~~~~~~~~~dvvi~~~g~ 224 (310)
....+++|+| +|..|.+.+..+...++. ++.+..+++++.+.+ +++... .+. ..+..+...++|+|+.|+++
T Consensus 123 ~~~~~v~IiG-aG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~---~~~~~~av~~aDiVitaT~s 198 (304)
T PRK07340 123 APPGDLLLIG-TGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE---PLDGEAIPEAVDLVVTATTS 198 (304)
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE---ECCHHHHhhcCCEEEEccCC
Confidence 4567899999 899999988877543464 677888888876655 444311 111 12233344689999999874
Q ss_pred hH-HHHhhcccCCEEEEEeCC
Q 021628 225 CD-KALKAVKEGGRVVSIIGS 244 (310)
Q Consensus 225 ~~-~~~~~l~~~G~~v~~g~~ 244 (310)
.. -.-..++|+-.+..+|.+
T Consensus 199 ~~Pl~~~~~~~g~hi~~iGs~ 219 (304)
T PRK07340 199 RTPVYPEAARAGRLVVAVGAF 219 (304)
T ss_pred CCceeCccCCCCCEEEecCCC
Confidence 21 111236888888888754
No 271
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=94.69 E-value=0.3 Score=42.03 Aligned_cols=89 Identities=19% Similarity=0.293 Sum_probs=56.4
Q ss_pred cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcC---CCEEeeCCCCcccccCCCccEEEeCCC
Q 021628 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLG---ADLAIDYTKENIEDLPEKFDVVFDAVG 223 (310)
Q Consensus 148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g---~~~~~~~~~~~~~~~~~~~dvvi~~~g 223 (310)
...+.+++|+| +|++|.+.+..+... |.+++++.+++++.+.+ +++. ........+ .....+|+||+|++
T Consensus 114 ~~~~k~vliiG-aGg~g~aia~~L~~~-g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~----~~~~~~DivInatp 187 (270)
T TIGR00507 114 LRPNQRVLIIG-AGGAARAVALPLLKA-DCNVIIANRTVSKAEELAERFQRYGEIQAFSMDE----LPLHRVDLIINATS 187 (270)
T ss_pred CccCCEEEEEc-CcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhhcCceEEechhh----hcccCccEEEECCC
Confidence 34578999999 689999888777764 88889999988876555 3332 112221111 11246899999986
Q ss_pred Ch-----H---HHHhhcccCCEEEEEe
Q 021628 224 QC-----D---KALKAVKEGGRVVSII 242 (310)
Q Consensus 224 ~~-----~---~~~~~l~~~G~~v~~g 242 (310)
.- . .....++++..++.+.
T Consensus 188 ~gm~~~~~~~~~~~~~l~~~~~v~D~~ 214 (270)
T TIGR00507 188 AGMSGNIDEPPVPAEKLKEGMVVYDMV 214 (270)
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEec
Confidence 31 1 1134566666666664
No 272
>PRK08643 acetoin reductase; Validated
Probab=94.68 E-value=0.17 Score=42.80 Aligned_cols=41 Identities=17% Similarity=0.185 Sum_probs=34.4
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
+.+++|+|++|.+|...++.+... |++|+++++++++.+.+
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~-G~~v~~~~r~~~~~~~~ 42 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVED-GFKVAIVDYNEETAQAA 42 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 568999999999999988877774 99999999987766544
No 273
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=94.67 E-value=0.18 Score=42.89 Aligned_cols=42 Identities=29% Similarity=0.478 Sum_probs=35.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|++|.+|...++.+... |++|++++++.++++.+
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~ 52 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEA-GARVVLSARKAEELEEA 52 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 4689999999999999988877764 99999999988776554
No 274
>PLN00203 glutamyl-tRNA reductase
Probab=94.65 E-value=0.19 Score=47.37 Aligned_cols=71 Identities=21% Similarity=0.390 Sum_probs=49.4
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHH-HcC-CCEEeeCCCCcccccCCCccEEEeCCCC
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLR-SLG-ADLAIDYTKENIEDLPEKFDVVFDAVGQ 224 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~-~~g-~~~~~~~~~~~~~~~~~~~dvvi~~~g~ 224 (310)
+.+|+|+| +|.+|.+++..+... |. +++++.++.++.+.+. +++ ....+.. -++......++|+||.|+++
T Consensus 266 ~kkVlVIG-AG~mG~~~a~~L~~~-G~~~V~V~nRs~era~~La~~~~g~~i~~~~-~~dl~~al~~aDVVIsAT~s 339 (519)
T PLN00203 266 SARVLVIG-AGKMGKLLVKHLVSK-GCTKMVVVNRSEERVAALREEFPDVEIIYKP-LDEMLACAAEADVVFTSTSS 339 (519)
T ss_pred CCEEEEEe-CHHHHHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHhCCCceEeec-HhhHHHHHhcCCEEEEccCC
Confidence 67999999 799999999888875 76 6888899988877664 453 2211111 11222334589999999873
No 275
>PLN03075 nicotianamine synthase; Provisional
Probab=94.63 E-value=0.63 Score=40.42 Aligned_cols=93 Identities=19% Similarity=0.185 Sum_probs=62.8
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHHcC-----CCEEee---CCCCcccccCCCccEEE
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSLG-----ADLAID---YTKENIEDLPEKFDVVF 219 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~~g-----~~~~~~---~~~~~~~~~~~~~dvvi 219 (310)
.++++|+-.| +|+.++.++.+++.+. +.+++.++.+++..+.+++.- ...-+. .+..+.....+.+|+||
T Consensus 122 ~~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l~~FDlVF 200 (296)
T PLN03075 122 GVPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESLKEYDVVF 200 (296)
T ss_pred CCCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcccccCCcCEEE
Confidence 3789999999 9999999998887542 356888999999887775532 111111 11111111235799998
Q ss_pred eCC------CC----hHHHHhhcccCCEEEEEe
Q 021628 220 DAV------GQ----CDKALKAVKEGGRVVSII 242 (310)
Q Consensus 220 ~~~------g~----~~~~~~~l~~~G~~v~~g 242 (310)
..+ .. ++...+.|+|||.++.-.
T Consensus 201 ~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 201 LAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred EecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 775 11 378889999999998654
No 276
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.61 E-value=0.19 Score=42.93 Aligned_cols=36 Identities=33% Similarity=0.298 Sum_probs=28.6
Q ss_pred CCCEEEEEcCCc--chHHHHHHHHHhhcCCcEEEEecCh
Q 021628 150 AGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSST 186 (310)
Q Consensus 150 ~g~~vlI~g~~g--~~G~~a~~la~~~~g~~vi~~~~~~ 186 (310)
.|.+++|+|+++ ++|.+.++.+... |++|++..+++
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~-G~~v~~~~r~~ 44 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKH-GAELWFTYQSE 44 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHc-CCEEEEEeCch
Confidence 568899999876 7999877766654 99998887764
No 277
>PRK05875 short chain dehydrogenase; Provisional
Probab=94.61 E-value=0.13 Score=44.16 Aligned_cols=42 Identities=26% Similarity=0.351 Sum_probs=35.1
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
++.+++|+|++|.+|...++.+... |++|+++.+++++.+..
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~ 47 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAA-GAAVMIVGRNPDKLAAA 47 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHH
Confidence 4689999999999999999888774 99999999887765443
No 278
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=94.61 E-value=0.81 Score=38.73 Aligned_cols=114 Identities=23% Similarity=0.289 Sum_probs=69.3
Q ss_pred HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHH----HcCCCE-E-e-eCC--CCccc-ccC
Q 021628 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLR----SLGADL-A-I-DYT--KENIE-DLP 212 (310)
Q Consensus 144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~----~~g~~~-~-~-~~~--~~~~~-~~~ 212 (310)
...+++||++|+-.| .+.|.++..+++.++. -+|+....++++.+.++ .+|... + + +.+ .+.+. ...
T Consensus 34 ~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~~~~~~ 111 (247)
T PF08704_consen 34 MRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGFDEELE 111 (247)
T ss_dssp HHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG--STT-T
T ss_pred HHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceeccccccccc
Confidence 568899999999998 4568888888887632 37888899999887774 455432 2 2 221 11121 122
Q ss_pred CCccEEE-eCCC---ChHHHHhhc-ccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCC
Q 021628 213 EKFDVVF-DAVG---QCDKALKAV-KEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGK 272 (310)
Q Consensus 213 ~~~dvvi-~~~g---~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (310)
..+|.|| |.-. .+..+.+.| +++|+++.+.. .-+..+..++.+++..
T Consensus 112 ~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP-------------~ieQv~~~~~~L~~~g 163 (247)
T PF08704_consen 112 SDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSP-------------CIEQVQKTVEALREHG 163 (247)
T ss_dssp TSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEES-------------SHHHHHHHHHHHHHTT
T ss_pred CcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC-------------CHHHHHHHHHHHHHCC
Confidence 4678775 5532 358889999 89999998863 3355555555555533
No 279
>PRK08862 short chain dehydrogenase; Provisional
Probab=94.58 E-value=0.2 Score=41.85 Aligned_cols=42 Identities=14% Similarity=0.179 Sum_probs=34.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.|.+++|+|+++++|.+.+.-+... |++|+++.+++++++.+
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~-G~~V~~~~r~~~~l~~~ 45 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARL-GATLILCDQDQSALKDT 45 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHH
Confidence 4689999999999999877766664 99999999988876554
No 280
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=94.51 E-value=0.09 Score=47.79 Aligned_cols=88 Identities=27% Similarity=0.352 Sum_probs=55.4
Q ss_pred EEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHH--cCCC-E--EeeCCC-CcccccCCCccEEEeCCCC--
Q 021628 154 ILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRS--LGAD-L--AIDYTK-ENIEDLPEKFDVVFDAVGQ-- 224 (310)
Q Consensus 154 vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~--~g~~-~--~~~~~~-~~~~~~~~~~dvvi~~~g~-- 224 (310)
|+|+|+ |.+|..++..+...... ++++.+++.++.+.+.+ .+.. . .++..+ +.+....++.|+||+|+|.
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~ 79 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF 79 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence 789997 99999999987774334 78999999999877743 2221 1 223222 1233345678999999984
Q ss_pred -hHHHHhhcccCCEEEEEe
Q 021628 225 -CDKALKAVKEGGRVVSII 242 (310)
Q Consensus 225 -~~~~~~~l~~~G~~v~~g 242 (310)
..-+-.|+..+-.++..+
T Consensus 80 ~~~v~~~~i~~g~~yvD~~ 98 (386)
T PF03435_consen 80 GEPVARACIEAGVHYVDTS 98 (386)
T ss_dssp HHHHHHHHHHHT-EEEESS
T ss_pred hHHHHHHHHHhCCCeeccc
Confidence 244446777777888743
No 281
>PRK06914 short chain dehydrogenase; Provisional
Probab=94.49 E-value=0.17 Score=43.47 Aligned_cols=41 Identities=22% Similarity=0.264 Sum_probs=34.5
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
+.+++|+|++|.+|...+..+... |++|+++++++++.+.+
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~ 43 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKK-GYLVIATMRNPEKQENL 43 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhC-CCEEEEEeCCHHHHHHH
Confidence 568999999999999988877774 99999999987766554
No 282
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=94.49 E-value=0.17 Score=43.55 Aligned_cols=42 Identities=21% Similarity=0.358 Sum_probs=34.7
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|+++.+|.+.+..+... |++|+++++++++.+.+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~ 50 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARA-GAKVAILDRNQEKAEAV 50 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 4689999999999999988877764 99999999987765444
No 283
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=94.46 E-value=1.2 Score=36.61 Aligned_cols=97 Identities=20% Similarity=0.168 Sum_probs=61.2
Q ss_pred HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCE--EeeCCCCcccccCCCcc
Q 021628 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL--AIDYTKENIEDLPEKFD 216 (310)
Q Consensus 143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~~~~~~~d 216 (310)
+...+++++++|+-.| +| .|..+..+++. ..+++.++.+++..+.++ +.+... +...+........+.+|
T Consensus 71 ~~~l~~~~~~~VLeiG-~G-sG~~t~~la~~--~~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 146 (212)
T PRK00312 71 TELLELKPGDRVLEIG-TG-SGYQAAVLAHL--VRRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGWPAYAPFD 146 (212)
T ss_pred HHhcCCCCCCEEEEEC-CC-ccHHHHHHHHH--hCEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCCCcCCCcC
Confidence 4567788999999998 33 46666666665 347888888888766553 334322 22221111111124699
Q ss_pred EEEeCCC--C-hHHHHhhcccCCEEEEEeC
Q 021628 217 VVFDAVG--Q-CDKALKAVKEGGRVVSIIG 243 (310)
Q Consensus 217 vvi~~~g--~-~~~~~~~l~~~G~~v~~g~ 243 (310)
+|+.... . .....+.|+++|+++..-.
T Consensus 147 ~I~~~~~~~~~~~~l~~~L~~gG~lv~~~~ 176 (212)
T PRK00312 147 RILVTAAAPEIPRALLEQLKEGGILVAPVG 176 (212)
T ss_pred EEEEccCchhhhHHHHHhcCCCcEEEEEEc
Confidence 8886543 2 4678899999999986644
No 284
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=94.45 E-value=0.17 Score=42.99 Aligned_cols=41 Identities=17% Similarity=0.253 Sum_probs=33.9
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
+++++|+|++|.+|...+..+... |+++++++++.++.+.+
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~-g~~vi~~~r~~~~~~~~ 42 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEE-GYRVAVADINSEKAANV 42 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence 468999999999999988877774 99999999887765444
No 285
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=94.44 E-value=0.47 Score=37.25 Aligned_cols=96 Identities=25% Similarity=0.276 Sum_probs=57.0
Q ss_pred ccccchHHHHHHHHHhcc-cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcc
Q 021628 130 ASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI 208 (310)
Q Consensus 130 a~~~~~~~ta~~al~~~~-~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 208 (310)
..+||.....+..++..+ .-.|++|+|.|.+..+|.-...++... ++.|+++...-+.++.
T Consensus 14 ~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~-~atVt~~h~~T~~l~~----------------- 75 (160)
T PF02882_consen 14 GFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNK-GATVTICHSKTKNLQE----------------- 75 (160)
T ss_dssp SS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHT-T-EEEEE-TTSSSHHH-----------------
T ss_pred CCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhC-CCeEEeccCCCCcccc-----------------
Confidence 344555444444455433 457999999998889999988888884 8888877665433322
Q ss_pred cccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628 209 EDLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 209 ~~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~ 245 (310)
..+.+|+|+.++|..+ ---++++++..++.+|...
T Consensus 76 --~~~~ADIVVsa~G~~~~i~~~~ik~gavVIDvG~~~ 111 (160)
T PF02882_consen 76 --ITRRADIVVSAVGKPNLIKADWIKPGAVVIDVGINY 111 (160)
T ss_dssp --HHTTSSEEEE-SSSTT-B-GGGS-TTEEEEE--CEE
T ss_pred --eeeeccEEeeeeccccccccccccCCcEEEecCCcc
Confidence 2346789999998542 2235678888888887543
No 286
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=94.42 E-value=0.13 Score=38.43 Aligned_cols=89 Identities=26% Similarity=0.321 Sum_probs=51.8
Q ss_pred EEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHHHHc-C----C-CEEeeCCCCcccccCCCccEEEeCCCC-
Q 021628 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSL-G----A-DLAIDYTKENIEDLPEKFDVVFDAVGQ- 224 (310)
Q Consensus 153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~~~~-g----~-~~~~~~~~~~~~~~~~~~dvvi~~~g~- 224 (310)
+|.|+|++|.+|...+.++......+++.+.. +.+....+.+. + . +..+.. .+.. ...++|+||.|.++
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~Dvvf~a~~~~ 77 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--ADPE-ELSDVDVVFLALPHG 77 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TSGH-HHTTESEEEE-SCHH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cchh-HhhcCCEEEecCchh
Confidence 58999999999999999887754566665544 44232222222 1 1 222221 1111 12689999999984
Q ss_pred -hHHHH-hhcccCCEEEEEeCC
Q 021628 225 -CDKAL-KAVKEGGRVVSIIGS 244 (310)
Q Consensus 225 -~~~~~-~~l~~~G~~v~~g~~ 244 (310)
..+.. +.+..+-+++..+..
T Consensus 78 ~~~~~~~~~~~~g~~ViD~s~~ 99 (121)
T PF01118_consen 78 ASKELAPKLLKAGIKVIDLSGD 99 (121)
T ss_dssp HHHHHHHHHHHTTSEEEESSST
T ss_pred HHHHHHHHHhhCCcEEEeCCHH
Confidence 23333 445666677777653
No 287
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.41 E-value=0.16 Score=43.10 Aligned_cols=45 Identities=27% Similarity=0.299 Sum_probs=33.6
Q ss_pred CCCEEEEEcCC--cchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc
Q 021628 150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL 195 (310)
Q Consensus 150 ~g~~vlI~g~~--g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~ 195 (310)
.|++++|+|++ +++|.+.++.+... |++|+++.++++..+.++++
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~-G~~Vi~~~r~~~~~~~~~~~ 52 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQ-GATVIYTYQNDRMKKSLQKL 52 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHC-CCEEEEecCchHHHHHHHhh
Confidence 47899999987 69999977766664 99999988874434444444
No 288
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.41 E-value=0.24 Score=42.58 Aligned_cols=73 Identities=25% Similarity=0.466 Sum_probs=46.6
Q ss_pred CCCCEEEEEcCCcchHHH-HHHHHHhhcCCcEEEEecChhhH-H---HHHHcCC--CEEeeCCC-Cccc-------ccCC
Q 021628 149 SAGKSILVLGGAGGVGTM-VIQLAKHVFGASKVAATSSTAKL-D---LLRSLGA--DLAIDYTK-ENIE-------DLPE 213 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~-a~~la~~~~g~~vi~~~~~~~~~-~---~~~~~g~--~~~~~~~~-~~~~-------~~~~ 213 (310)
-.|+.|||+|+.+++|.+ |.++|+. |+++++.+.+.+.. + .+++.|. .++.|-++ ++.. +..+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~r--g~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKR--GAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG 113 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHh--CCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 468999999999999987 5556664 88888888765543 2 3334442 22333222 2221 1234
Q ss_pred CccEEEeCCC
Q 021628 214 KFDVVFDAVG 223 (310)
Q Consensus 214 ~~dvvi~~~g 223 (310)
.+|+++|.+|
T Consensus 114 ~V~ILVNNAG 123 (300)
T KOG1201|consen 114 DVDILVNNAG 123 (300)
T ss_pred CceEEEeccc
Confidence 7899999988
No 289
>PLN02780 ketoreductase/ oxidoreductase
Probab=94.37 E-value=0.098 Score=46.27 Aligned_cols=42 Identities=24% Similarity=0.245 Sum_probs=35.5
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.|.+++|+|+++++|.+.+..+... |++|+++++++++++.+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~-G~~Vil~~R~~~~l~~~ 93 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARK-GLNLVLVARNPDKLKDV 93 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHC-CCCEEEEECCHHHHHHH
Confidence 5899999999999999877765553 99999999999887655
No 290
>PRK08263 short chain dehydrogenase; Provisional
Probab=94.37 E-value=0.24 Score=42.56 Aligned_cols=72 Identities=24% Similarity=0.315 Sum_probs=47.9
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-cCCC-EEeeCCCCcccc----------cCCCccEE
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGAD-LAIDYTKENIED----------LPEKFDVV 218 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~g~~-~~~~~~~~~~~~----------~~~~~dvv 218 (310)
+.+|+|+|++|.+|...+..+... |.+|+++++++++++.+.+ ++.. ..+..+-.+... ...++|.+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALER-GDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 458999999999999988877664 8999999998887766543 3321 122221111111 12368999
Q ss_pred EeCCC
Q 021628 219 FDAVG 223 (310)
Q Consensus 219 i~~~g 223 (310)
|.++|
T Consensus 82 i~~ag 86 (275)
T PRK08263 82 VNNAG 86 (275)
T ss_pred EECCC
Confidence 99987
No 291
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=94.31 E-value=0.49 Score=38.21 Aligned_cols=93 Identities=24% Similarity=0.255 Sum_probs=54.0
Q ss_pred hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEe-eCCCCcc-c-----ccCCCccE
Q 021628 145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTKENI-E-----DLPEKFDV 217 (310)
Q Consensus 145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~~~~-~-----~~~~~~dv 217 (310)
...+++|++||.+| +|+-+.......+.....++++++.++++ ...+...+. +..+... . ....++|+
T Consensus 27 ~~~i~~g~~VLDiG-~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D~ 101 (188)
T TIGR00438 27 FKLIKPGDTVLDLG-AAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDEEVLNKIRERVGDDKVDV 101 (188)
T ss_pred hcccCCCCEEEEec-CCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCChhHHHHHHHHhCCCCccE
Confidence 46678999999999 66655543333333113478899888765 112332221 2221110 0 11346999
Q ss_pred EEeC-C----CC---------------hHHHHhhcccCCEEEEEe
Q 021628 218 VFDA-V----GQ---------------CDKALKAVKEGGRVVSII 242 (310)
Q Consensus 218 vi~~-~----g~---------------~~~~~~~l~~~G~~v~~g 242 (310)
|+.. + |. +..+.++|+++|+++...
T Consensus 102 V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 102 VMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred EEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 9952 1 21 245688999999998754
No 292
>PRK06141 ornithine cyclodeaminase; Validated
Probab=94.29 E-value=0.37 Score=42.48 Aligned_cols=92 Identities=17% Similarity=0.172 Sum_probs=57.3
Q ss_pred cCCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHH-HHc---CCCEEeeCCCCcccccCCCccEEEeCC
Q 021628 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLL-RSL---GADLAIDYTKENIEDLPEKFDVVFDAV 222 (310)
Q Consensus 148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~-~~~---g~~~~~~~~~~~~~~~~~~~dvvi~~~ 222 (310)
.+...+|+|+| +|..|.+.+..+...++ .++.+..+++++.+.+ +++ +..... . .+..+..+++|+|+.|+
T Consensus 122 ~~~~~~v~iiG-~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~-~--~~~~~av~~aDIVi~aT 197 (314)
T PRK06141 122 RKDASRLLVVG-TGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEV-V--TDLEAAVRQADIISCAT 197 (314)
T ss_pred CCCCceEEEEC-CcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEE-e--CCHHHHHhcCCEEEEee
Confidence 35678999999 89999998764443234 5788889998886665 333 322111 1 12233346899999887
Q ss_pred CChHHH--HhhcccCCEEEEEeC
Q 021628 223 GQCDKA--LKAVKEGGRVVSIIG 243 (310)
Q Consensus 223 g~~~~~--~~~l~~~G~~v~~g~ 243 (310)
++.... -+.++++-.+..+|.
T Consensus 198 ~s~~pvl~~~~l~~g~~i~~ig~ 220 (314)
T PRK06141 198 LSTEPLVRGEWLKPGTHLDLVGN 220 (314)
T ss_pred CCCCCEecHHHcCCCCEEEeeCC
Confidence 743211 256777775555554
No 293
>PRK08339 short chain dehydrogenase; Provisional
Probab=94.29 E-value=0.12 Score=44.27 Aligned_cols=42 Identities=19% Similarity=0.302 Sum_probs=35.6
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.|++++|+|+++++|.+.++.+... |++|+++++++++++.+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~ 48 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARA-GADVILLSRNEENLKKA 48 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 4789999999999999988877774 99999999988776554
No 294
>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain. GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.
Probab=94.29 E-value=1 Score=35.01 Aligned_cols=104 Identities=19% Similarity=0.266 Sum_probs=59.6
Q ss_pred EEEEEcCCcchHHHHHHHHHhhcCCcEEEEec--ChhhHHHHHH----cCC-CEEeeCCCC---------------c---
Q 021628 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS--STAKLDLLRS----LGA-DLAIDYTKE---------------N--- 207 (310)
Q Consensus 153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~--~~~~~~~~~~----~g~-~~~~~~~~~---------------~--- 207 (310)
+|.|.| .|.+|...++.+....+.+++++.. +.+-+..+-+ .|. ...+...+. +
T Consensus 2 kv~I~G-~GriGr~v~~~~~~~~~~~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~ 80 (149)
T smart00846 2 KVGING-FGRIGRLVLRALLERPDIEVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPAN 80 (149)
T ss_pred EEEEEC-cCHHHHHHHHHHHhCCCCEEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHH
Confidence 578999 6999998888776533566666543 4444444422 221 000111100 0
Q ss_pred ccccCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCceEEEEecC
Q 021628 208 IEDLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSD 257 (310)
Q Consensus 208 ~~~~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 257 (310)
..+...|+|+|+||+|. .+.+..++..|.+-|.++.+.......|.....
T Consensus 81 ~~w~~~gvDiVie~tG~f~~~~~~~~hl~~GakkViisap~~~~~~t~V~GvN 133 (149)
T smart00846 81 LPWKELGVDIVVECTGKFTTREKASAHLKAGAKKVIISAPAKDADKTFVYGVN 133 (149)
T ss_pred CcccccCCeEEEeccccccchHHHHHHHHcCCCEEEeCCCCCCCCceEEEeec
Confidence 01112378999999984 355667888888888888765433223444333
No 295
>PLN02253 xanthoxin dehydrogenase
Probab=94.29 E-value=0.17 Score=43.54 Aligned_cols=42 Identities=29% Similarity=0.386 Sum_probs=33.7
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|++|.+|.+.+..+... |++|+++++++++.+.+
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~-G~~v~~~~~~~~~~~~~ 58 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKH-GAKVCIVDLQDDLGQNV 58 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 4679999999999999888766664 99999998876655443
No 296
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=94.27 E-value=0.61 Score=39.01 Aligned_cols=88 Identities=16% Similarity=0.241 Sum_probs=54.8
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCC---cEEEEecC----hhh--------HHHHHHcCCCEEeeCCCCcccccCC
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA---SKVAATSS----TAK--------LDLLRSLGADLAIDYTKENIEDLPE 213 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~---~vi~~~~~----~~~--------~~~~~~~g~~~~~~~~~~~~~~~~~ 213 (310)
-.+.+|+|+| +|+.|.+.+..+... |. ++++++++ .+| .+++++++... . ..++.+..+
T Consensus 23 l~~~rvlvlG-AGgAg~aiA~~L~~~-G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~~~l~~~l~ 96 (226)
T cd05311 23 IEEVKIVING-AGAAGIAIARLLLAA-GAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---GGTLKEALK 96 (226)
T ss_pred ccCCEEEEEC-chHHHHHHHHHHHHc-CcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---cCCHHHHHh
Confidence 4567999999 899999988877775 76 47788887 444 22334443211 0 012222334
Q ss_pred CccEEEeCCCC---hHHHHhhcccCCEEEEEe
Q 021628 214 KFDVVFDAVGQ---CDKALKAVKEGGRVVSII 242 (310)
Q Consensus 214 ~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g 242 (310)
++|++|++++. ....++.|.++..++.+.
T Consensus 97 ~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 97 GADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred cCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 68999999852 246667776666555443
No 297
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=94.27 E-value=0.048 Score=47.16 Aligned_cols=66 Identities=23% Similarity=0.218 Sum_probs=43.6
Q ss_pred EEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628 154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG 223 (310)
Q Consensus 154 vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g 223 (310)
|+|+|++|-+|...+..+... |.+|+++++++++.......+ +.............++|+||++++
T Consensus 1 vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~D~Vvh~a~ 66 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKD-GHEVTILTRSPPAGANTKWEG---YKPWAPLAESEALEGADAVINLAG 66 (292)
T ss_pred CEEEcccchhhHHHHHHHHHc-CCEEEEEeCCCCCCCccccee---eecccccchhhhcCCCCEEEECCC
Confidence 689999999999999877774 899999999776643322111 111111111223357999999876
No 298
>PRK08589 short chain dehydrogenase; Validated
Probab=94.27 E-value=0.23 Score=42.70 Aligned_cols=38 Identities=18% Similarity=0.276 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL 189 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~ 189 (310)
.+.+++|+|+++++|.+.+..+... |++|+++.++ ++.
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~-G~~vi~~~r~-~~~ 42 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQE-GAYVLAVDIA-EAV 42 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCc-HHH
Confidence 4789999999999999988766664 9999999988 443
No 299
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=94.27 E-value=0.51 Score=40.95 Aligned_cols=141 Identities=21% Similarity=0.259 Sum_probs=80.6
Q ss_pred CCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH--hcccCCCCEEEEEcC
Q 021628 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE--RSAFSAGKSILVLGG 159 (310)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~--~~~~~~g~~vlI~g~ 159 (310)
.++|++.+..++ |.++..-....++++..++.+- ......|++ +++ ....++|.+|+=+|
T Consensus 109 ~rig~~f~I~Ps------------w~~~~~~~~~~~i~lDPGlAFG----TG~HpTT~l-cL~~Le~~~~~g~~vlDvG- 170 (300)
T COG2264 109 VRIGERFVIVPS------------WREYPEPSDELNIELDPGLAFG----TGTHPTTSL-CLEALEKLLKKGKTVLDVG- 170 (300)
T ss_pred EEeeeeEEECCC------------CccCCCCCCceEEEEccccccC----CCCChhHHH-HHHHHHHhhcCCCEEEEec-
Confidence 667887666542 3332211123445555544331 122333333 442 34456999999988
Q ss_pred CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCCEEeeCCCCcc-cc-cCCCccEEEeCCC-C-----hHH
Q 021628 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKENI-ED-LPEKFDVVFDAVG-Q-----CDK 227 (310)
Q Consensus 160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~-~~-~~~~~dvvi~~~g-~-----~~~ 227 (310)
.+.|.+++..++. +..+++.++.++...+.+++ -+..........+. .. ..+.+|+|+-+.= . ...
T Consensus 171 -cGSGILaIAa~kL-GA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~ 248 (300)
T COG2264 171 -CGSGILAIAAAKL-GAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELAPD 248 (300)
T ss_pred -CChhHHHHHHHHc-CCceEEEecCCHHHHHHHHHHHHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHHHH
Confidence 4568888888886 23468888888877666643 22221000000011 11 1247999997752 1 268
Q ss_pred HHhhcccCCEEEEEe
Q 021628 228 ALKAVKEGGRVVSII 242 (310)
Q Consensus 228 ~~~~l~~~G~~v~~g 242 (310)
....++|+|++++-|
T Consensus 249 ~~~~lkpgg~lIlSG 263 (300)
T COG2264 249 IKRLLKPGGRLILSG 263 (300)
T ss_pred HHHHcCCCceEEEEe
Confidence 888999999999887
No 300
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.26 E-value=0.32 Score=42.02 Aligned_cols=95 Identities=24% Similarity=0.257 Sum_probs=66.3
Q ss_pred cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (310)
Q Consensus 131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (310)
..||+....+..++..++ -.|.+|+|.|.+..+|.-...++... ++.|+++-+.-. ++.
T Consensus 134 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~-~aTVtichs~T~-------------------~l~ 193 (287)
T PRK14173 134 LEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLRE-DATVTLAHSKTQ-------------------DLP 193 (287)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEeCCCCC-------------------CHH
Confidence 457665555555565554 46999999999999999988888874 887776644322 223
Q ss_pred ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628 210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~ 245 (310)
+..+.+|+|+.++|..+ -.-+++++|..++.+|...
T Consensus 194 ~~~~~ADIvIsAvGkp~~i~~~~vk~GavVIDVGin~ 230 (287)
T PRK14173 194 AVTRRADVLVVAVGRPHLITPEMVRPGAVVVDVGINR 230 (287)
T ss_pred HHHhhCCEEEEecCCcCccCHHHcCCCCEEEEccCcc
Confidence 33456899999998532 2346788999999998654
No 301
>PRK06138 short chain dehydrogenase; Provisional
Probab=94.26 E-value=0.16 Score=42.74 Aligned_cols=42 Identities=26% Similarity=0.426 Sum_probs=34.2
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|++|.+|...+..+... |++|+++.++.++.+..
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~ 45 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFARE-GARVVVADRDAEAAERV 45 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHC-CCeEEEecCCHHHHHHH
Confidence 4679999999999999988866664 89999999987765444
No 302
>PRK06932 glycerate dehydrogenase; Provisional
Probab=94.24 E-value=0.2 Score=44.15 Aligned_cols=100 Identities=21% Similarity=0.198 Sum_probs=67.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----- 224 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~----- 224 (310)
.|.+|.|+| .|.+|...++.++.. |.+|+..++..... ... ...++.+.....|+|+-+.+.
T Consensus 146 ~gktvgIiG-~G~IG~~va~~l~~f-g~~V~~~~~~~~~~-----~~~------~~~~l~ell~~sDiv~l~~Plt~~T~ 212 (314)
T PRK06932 146 RGSTLGVFG-KGCLGTEVGRLAQAL-GMKVLYAEHKGASV-----CRE------GYTPFEEVLKQADIVTLHCPLTETTQ 212 (314)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhcC-CCEEEEECCCcccc-----ccc------ccCCHHHHHHhCCEEEEcCCCChHHh
Confidence 478999999 999999999999994 99998876542210 000 011344445678999887761
Q ss_pred -h--HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628 225 -C--DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK 274 (310)
Q Consensus 225 -~--~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (310)
+ ...+..|+++..++.++.-. -=+-+.+++.+.+|++.
T Consensus 213 ~li~~~~l~~mk~ga~lIN~aRG~------------~Vde~AL~~aL~~g~i~ 253 (314)
T PRK06932 213 NLINAETLALMKPTAFLINTGRGP------------LVDEQALLDALENGKIA 253 (314)
T ss_pred cccCHHHHHhCCCCeEEEECCCcc------------ccCHHHHHHHHHcCCcc
Confidence 1 68889999999999886311 01234555666676665
No 303
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=94.24 E-value=0.39 Score=41.59 Aligned_cols=59 Identities=24% Similarity=0.392 Sum_probs=48.1
Q ss_pred HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec---ChhhHHHHHHcCCCEEeeCC
Q 021628 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGADLAIDYT 204 (310)
Q Consensus 144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~---~~~~~~~~~~~g~~~~~~~~ 204 (310)
+...++||++|+- +.+|..|.+.+.+|+.+ |++++++.. +++|.+.++.+|+..++...
T Consensus 55 ~~G~l~pG~tIVE-~TSGNTGI~LA~vaa~~-Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 55 KRGLLKPGGTIVE-ATSGNTGIALAMVAAAK-GYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HcCCCCCCCEEEE-cCCChHHHHHHHHHHHc-CCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 4667999996655 45999999999999995 999888853 88899999999987766443
No 304
>PRK08267 short chain dehydrogenase; Provisional
Probab=94.23 E-value=0.24 Score=42.07 Aligned_cols=41 Identities=32% Similarity=0.318 Sum_probs=34.8
Q ss_pred CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH
Q 021628 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR 193 (310)
Q Consensus 152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~ 193 (310)
.+++|+|++|.+|...+..+... |++|++++++.++.+.+.
T Consensus 2 k~vlItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~ 42 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAE-GWRVGAYDINEAGLAALA 42 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHH
Confidence 47999999999999988877764 999999999888776663
No 305
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=94.23 E-value=0.21 Score=42.38 Aligned_cols=37 Identities=38% Similarity=0.429 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA 187 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~ 187 (310)
.+.+++|+|+++.+|.+.++.+... |++|+++++++.
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~-G~~v~~~~r~~~ 43 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAE-GARVVLVDRSEL 43 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCchH
Confidence 4679999999999999988877764 999999988754
No 306
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=94.23 E-value=0.26 Score=43.25 Aligned_cols=85 Identities=16% Similarity=0.266 Sum_probs=62.5
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC----
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---- 224 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---- 224 (310)
-.|.+|.|+| -|.+|.+.++.++.. |.+|++..+.....+.++..|.. +. +..+....+|+|+-+.+.
T Consensus 14 LkgKtVGIIG-~GsIG~amA~nL~d~-G~~ViV~~r~~~s~~~A~~~G~~-v~-----sl~Eaak~ADVV~llLPd~~t~ 85 (335)
T PRK13403 14 LQGKTVAVIG-YGSQGHAQAQNLRDS-GVEVVVGVRPGKSFEVAKADGFE-VM-----SVSEAVRTAQVVQMLLPDEQQA 85 (335)
T ss_pred hCcCEEEEEe-EcHHHHHHHHHHHHC-cCEEEEEECcchhhHHHHHcCCE-EC-----CHHHHHhcCCEEEEeCCChHHH
Confidence 4688999999 999999999999985 99999887765555556666652 11 344556688999988763
Q ss_pred --h-HHHHhhcccCCEEEEE
Q 021628 225 --C-DKALKAVKEGGRVVSI 241 (310)
Q Consensus 225 --~-~~~~~~l~~~G~~v~~ 241 (310)
. ...+..|+++..+++.
T Consensus 86 ~V~~~eil~~MK~GaiL~f~ 105 (335)
T PRK13403 86 HVYKAEVEENLREGQMLLFS 105 (335)
T ss_pred HHHHHHHHhcCCCCCEEEEC
Confidence 1 4567788888766654
No 307
>PRK08264 short chain dehydrogenase; Validated
Probab=94.23 E-value=0.22 Score=41.68 Aligned_cols=40 Identities=28% Similarity=0.418 Sum_probs=33.7
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLD 190 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~ 190 (310)
.+.+++|+|++|.+|...++.+... |. +|+++++++++.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~-G~~~V~~~~r~~~~~~ 45 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLAR-GAAKVYAAARDPESVT 45 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CcccEEEEecChhhhh
Confidence 4678999999999999988877774 88 8999998877654
No 308
>PRK06179 short chain dehydrogenase; Provisional
Probab=94.22 E-value=0.12 Score=44.33 Aligned_cols=39 Identities=21% Similarity=0.338 Sum_probs=32.6
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHH
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD 190 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~ 190 (310)
+.+++|+|++|.+|...++.+... |++|+++++++++.+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~-g~~V~~~~r~~~~~~ 42 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARA-GYRVFGTSRNPARAA 42 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCChhhcc
Confidence 568999999999999988877764 999999999876654
No 309
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=94.22 E-value=0.77 Score=37.45 Aligned_cols=93 Identities=18% Similarity=0.220 Sum_probs=58.8
Q ss_pred hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCCE--EeeCCCCcccccCCCccEE
Q 021628 145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADL--AIDYTKENIEDLPEKFDVV 218 (310)
Q Consensus 145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~~dvv 218 (310)
.....++.+||-+| +| .|..+..+++. |.+|++++.+++-.+.+++ .+... +...+-.+.. ..+.+|+|
T Consensus 25 ~l~~~~~~~vLDiG-cG-~G~~a~~La~~--g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~I 99 (197)
T PRK11207 25 AVKVVKPGKTLDLG-CG-NGRNSLYLAAN--GFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNLT-FDGEYDFI 99 (197)
T ss_pred hcccCCCCcEEEEC-CC-CCHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhCC-cCCCcCEE
Confidence 33455678999998 44 48888888875 7899999999887666543 22221 1111111111 13469999
Q ss_pred EeCCC----C-------hHHHHhhcccCCEEEEEe
Q 021628 219 FDAVG----Q-------CDKALKAVKEGGRVVSII 242 (310)
Q Consensus 219 i~~~g----~-------~~~~~~~l~~~G~~v~~g 242 (310)
+.+.. . +..+.+.|+|+|.++.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~ 134 (197)
T PRK11207 100 LSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 134 (197)
T ss_pred EEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 87632 1 256778899999965543
No 310
>PRK06484 short chain dehydrogenase; Validated
Probab=94.21 E-value=0.19 Score=47.51 Aligned_cols=73 Identities=30% Similarity=0.450 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCE-E--eeCCCC-ccc----c---cCCCccE
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-A--IDYTKE-NIE----D---LPEKFDV 217 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-~--~~~~~~-~~~----~---~~~~~dv 217 (310)
.+.+++|+|+++++|.+.++.+... |++|+++.++.++++.+ ++++... . .|..++ +.. . ...++|+
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARA-GDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 5789999999999999988877774 99999999988887655 4455332 1 222211 111 1 1246899
Q ss_pred EEeCCC
Q 021628 218 VFDAVG 223 (310)
Q Consensus 218 vi~~~g 223 (310)
+|+++|
T Consensus 83 li~nag 88 (520)
T PRK06484 83 LVNNAG 88 (520)
T ss_pred EEECCC
Confidence 998875
No 311
>PRK06482 short chain dehydrogenase; Provisional
Probab=94.21 E-value=0.22 Score=42.81 Aligned_cols=42 Identities=21% Similarity=0.306 Sum_probs=35.0
Q ss_pred CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH
Q 021628 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS 194 (310)
Q Consensus 152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~ 194 (310)
.+++|+|++|.+|...+..+... |.+|+++++++++.+.+++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~-g~~v~~~~r~~~~~~~~~~ 44 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLAR-GDRVAATVRRPDALDDLKA 44 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH
Confidence 57999999999999988776664 8999999999888776643
No 312
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.20 E-value=0.19 Score=42.93 Aligned_cols=36 Identities=19% Similarity=0.247 Sum_probs=28.0
Q ss_pred CCCEEEEEcC--CcchHHHHHHHHHhhcCCcEEEEecCh
Q 021628 150 AGKSILVLGG--AGGVGTMVIQLAKHVFGASKVAATSST 186 (310)
Q Consensus 150 ~g~~vlI~g~--~g~~G~~a~~la~~~~g~~vi~~~~~~ 186 (310)
.+.+++|+|+ ++++|.+.+..+... |++|++..+++
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~-G~~v~~~~~~~ 42 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQ-GAELAFTYVVD 42 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCcH
Confidence 5679999996 569999977766664 99998876553
No 313
>PRK06483 dihydromonapterin reductase; Provisional
Probab=94.19 E-value=0.29 Score=40.88 Aligned_cols=72 Identities=17% Similarity=0.268 Sum_probs=45.9
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh-HHHHHHcCCCEE-eeCCCC-ccc-------ccCCCccEEEe
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDLLRSLGADLA-IDYTKE-NIE-------DLPEKFDVVFD 220 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~-~~~~~~~g~~~~-~~~~~~-~~~-------~~~~~~dvvi~ 220 (310)
+.+++|+|+++++|...++.+... |++|+++.+++++ .+.+++.+...+ .|..+. +.. ....++|++++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~ 80 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQ-GQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH 80 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence 468999999999999988877664 9999999887654 333344453221 122111 110 01235899998
Q ss_pred CCC
Q 021628 221 AVG 223 (310)
Q Consensus 221 ~~g 223 (310)
++|
T Consensus 81 ~ag 83 (236)
T PRK06483 81 NAS 83 (236)
T ss_pred CCc
Confidence 876
No 314
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=94.19 E-value=0.17 Score=44.61 Aligned_cols=73 Identities=22% Similarity=0.290 Sum_probs=46.6
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc----CC--C-EEeeCC--C-CcccccCCCccEEE
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GA--D-LAIDYT--K-ENIEDLPEKFDVVF 219 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~----g~--~-~~~~~~--~-~~~~~~~~~~dvvi 219 (310)
.|.+|+|+|++|.+|...+..+... |.+|++++++.++.+.+.++ +. . .++..+ + +.+....+++|+||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi 82 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLR-GYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF 82 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence 5789999999999999988877764 99999888876654333221 11 1 122211 1 11222234789999
Q ss_pred eCCC
Q 021628 220 DAVG 223 (310)
Q Consensus 220 ~~~g 223 (310)
.+++
T Consensus 83 h~A~ 86 (322)
T PLN02986 83 HTAS 86 (322)
T ss_pred EeCC
Confidence 8875
No 315
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=94.18 E-value=0.23 Score=48.64 Aligned_cols=42 Identities=29% Similarity=0.381 Sum_probs=35.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|++|.+|.+.+..+... |++|++++++.++.+.+
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~-Ga~Vvi~~r~~~~~~~~ 454 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAE-GAHVVLADLNLEAAEAV 454 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHH
Confidence 4789999999999999988877774 99999999988776544
No 316
>PRK07402 precorrin-6B methylase; Provisional
Probab=94.17 E-value=0.72 Score=37.51 Aligned_cols=97 Identities=16% Similarity=0.275 Sum_probs=59.8
Q ss_pred HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCCE--EeeCCCCc-ccccCCCcc
Q 021628 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADL--AIDYTKEN-IEDLPEKFD 216 (310)
Q Consensus 144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~~~-~~~~~~~~d 216 (310)
....++++++|+=.| .+.|..+..+++...+.+++.++.+++..+.+++ ++... ++..+... +......+|
T Consensus 34 ~~l~~~~~~~VLDiG--~G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~d 111 (196)
T PRK07402 34 SQLRLEPDSVLWDIG--AGTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPAPD 111 (196)
T ss_pred HhcCCCCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCCCC
Confidence 456778899988887 4456667777765335789999999988777643 45332 22222211 112222334
Q ss_pred E-EEeCCCC----hHHHHhhcccCCEEEEEe
Q 021628 217 V-VFDAVGQ----CDKALKAVKEGGRVVSII 242 (310)
Q Consensus 217 v-vi~~~g~----~~~~~~~l~~~G~~v~~g 242 (310)
. +++.... ++.+.+.|+++|+++...
T Consensus 112 ~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 142 (196)
T PRK07402 112 RVCIEGGRPIKEILQAVWQYLKPGGRLVATA 142 (196)
T ss_pred EEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 4 4443322 378888999999998774
No 317
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=94.13 E-value=0.32 Score=46.15 Aligned_cols=85 Identities=22% Similarity=0.359 Sum_probs=62.2
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----- 224 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~----- 224 (310)
.|.+|.|+| .|.+|...+..++.. |.+|++.++.... +...+++.... ++.+....+|+|+.+.+.
T Consensus 139 ~gktvgIiG-~G~IG~~vA~~l~~f-G~~V~~~d~~~~~-~~~~~~g~~~~------~l~ell~~aDiV~l~lP~t~~t~ 209 (526)
T PRK13581 139 YGKTLGIIG-LGRIGSEVAKRAKAF-GMKVIAYDPYISP-ERAAQLGVELV------SLDELLARADFITLHTPLTPETR 209 (526)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEECCCCCh-hHHHhcCCEEE------cHHHHHhhCCEEEEccCCChHhh
Confidence 478999999 999999999999984 9999999875332 22344554322 234445678999988762
Q ss_pred --h-HHHHhhcccCCEEEEEeC
Q 021628 225 --C-DKALKAVKEGGRVVSIIG 243 (310)
Q Consensus 225 --~-~~~~~~l~~~G~~v~~g~ 243 (310)
+ ...+..|+++..++.++.
T Consensus 210 ~li~~~~l~~mk~ga~lIN~aR 231 (526)
T PRK13581 210 GLIGAEELAKMKPGVRIINCAR 231 (526)
T ss_pred cCcCHHHHhcCCCCeEEEECCC
Confidence 1 577889999999988863
No 318
>PRK06436 glycerate dehydrogenase; Provisional
Probab=94.12 E-value=0.3 Score=42.74 Aligned_cols=82 Identities=29% Similarity=0.329 Sum_probs=58.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----- 224 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~----- 224 (310)
.|.+|.|+| .|.+|...++.++.. |.+|++.+++... .+.... ..++.+....+|+|+.+.+.
T Consensus 121 ~gktvgIiG-~G~IG~~vA~~l~af-G~~V~~~~r~~~~------~~~~~~----~~~l~ell~~aDiv~~~lp~t~~T~ 188 (303)
T PRK06436 121 YNKSLGILG-YGGIGRRVALLAKAF-GMNIYAYTRSYVN------DGISSI----YMEPEDIMKKSDFVLISLPLTDETR 188 (303)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEECCCCcc------cCcccc----cCCHHHHHhhCCEEEECCCCCchhh
Confidence 588999999 999999988999984 9999999886322 121110 11334445678999888762
Q ss_pred -h--HHHHhhcccCCEEEEEeC
Q 021628 225 -C--DKALKAVKEGGRVVSIIG 243 (310)
Q Consensus 225 -~--~~~~~~l~~~G~~v~~g~ 243 (310)
+ ...+..|+++..++.++.
T Consensus 189 ~li~~~~l~~mk~ga~lIN~sR 210 (303)
T PRK06436 189 GMINSKMLSLFRKGLAIINVAR 210 (303)
T ss_pred cCcCHHHHhcCCCCeEEEECCC
Confidence 1 567888999988887763
No 319
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=94.10 E-value=0.29 Score=43.28 Aligned_cols=103 Identities=18% Similarity=0.264 Sum_probs=68.4
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----- 224 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~----- 224 (310)
|.||-|+| .|.+|...++.++.. |.+|++.++ ..+..... .+. . ...++.+.....|++....+.
T Consensus 142 gkTvGIiG-~G~IG~~va~~l~af-gm~v~~~d~~~~~~~~~~--~~~---~--~~~~Ld~lL~~sDiv~lh~PlT~eT~ 212 (324)
T COG0111 142 GKTVGIIG-LGRIGRAVAKRLKAF-GMKVIGYDPYSPRERAGV--DGV---V--GVDSLDELLAEADILTLHLPLTPETR 212 (324)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhC-CCeEEEECCCCchhhhcc--ccc---e--ecccHHHHHhhCCEEEEcCCCCcchh
Confidence 78999999 999999999999995 999999998 33322211 111 0 011234445567888776651
Q ss_pred -h--HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628 225 -C--DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK 274 (310)
Q Consensus 225 -~--~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (310)
+ ...+..|+++..++.++.-. --+-+.+++.+.+|++.
T Consensus 213 g~i~~~~~a~MK~gailIN~aRG~------------vVde~aL~~AL~~G~i~ 253 (324)
T COG0111 213 GLINAEELAKMKPGAILINAARGG------------VVDEDALLAALDSGKIA 253 (324)
T ss_pred cccCHHHHhhCCCCeEEEECCCcc------------eecHHHHHHHHHcCCcc
Confidence 1 57788888888887775211 12345667777777776
No 320
>PRK06720 hypothetical protein; Provisional
Probab=94.10 E-value=0.27 Score=39.13 Aligned_cols=41 Identities=27% Similarity=0.349 Sum_probs=33.2
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL 191 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~ 191 (310)
.+..++|.|+++++|...+..+... |++|+++++++++.+.
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~-G~~V~l~~r~~~~~~~ 55 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQ-GAKVIVTDIDQESGQA 55 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHH
Confidence 4789999999999999988766664 8999999987766543
No 321
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=94.09 E-value=0.32 Score=39.84 Aligned_cols=78 Identities=23% Similarity=0.270 Sum_probs=53.3
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCCEEeeCCCCcccccCCCccEEEeCC-CC--
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDLPEKFDVVFDAV-GQ-- 224 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~dvvi~~~-g~-- 224 (310)
-.|.+|+|.| .|.+|..+++.+... |.+|++.++++++.+.+. .++.. .++.. + .....+|+++-|+ +.
T Consensus 26 l~gk~v~I~G-~G~vG~~~A~~L~~~-G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~-~---l~~~~~Dv~vp~A~~~~I 98 (200)
T cd01075 26 LEGKTVAVQG-LGKVGYKLAEHLLEE-GAKLIVADINEEAVARAAELFGAT-VVAPE-E---IYSVDADVFAPCALGGVI 98 (200)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHcCCE-EEcch-h---hccccCCEEEeccccccc
Confidence 3578999999 899999999999885 999999999988877764 44543 22221 1 1112688888664 32
Q ss_pred hHHHHhhcc
Q 021628 225 CDKALKAVK 233 (310)
Q Consensus 225 ~~~~~~~l~ 233 (310)
....++.|+
T Consensus 99 ~~~~~~~l~ 107 (200)
T cd01075 99 NDDTIPQLK 107 (200)
T ss_pred CHHHHHHcC
Confidence 245556663
No 322
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=94.09 E-value=0.26 Score=41.57 Aligned_cols=70 Identities=23% Similarity=0.356 Sum_probs=47.0
Q ss_pred EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-cCCCE-EeeCCCCcccc----------cCCCccEEEe
Q 021628 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADL-AIDYTKENIED----------LPEKFDVVFD 220 (310)
Q Consensus 153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~----------~~~~~dvvi~ 220 (310)
+++|+|++|.+|.+.+..+... |++|+++++++++.+.+.+ ++... .+..+-.+... ...++|.++.
T Consensus 2 ~vlItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~ 80 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQ-GHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN 80 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6899999999999988887774 9999999999887766533 44322 22111111111 1236899998
Q ss_pred CCC
Q 021628 221 AVG 223 (310)
Q Consensus 221 ~~g 223 (310)
++|
T Consensus 81 ~ag 83 (248)
T PRK10538 81 NAG 83 (248)
T ss_pred CCC
Confidence 875
No 323
>PRK06484 short chain dehydrogenase; Validated
Probab=94.08 E-value=0.25 Score=46.73 Aligned_cols=73 Identities=23% Similarity=0.397 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCCE-Ee--eCCCC-cccc-------cCCCccE
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADL-AI--DYTKE-NIED-------LPEKFDV 217 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~-~~--~~~~~-~~~~-------~~~~~dv 217 (310)
.|.+++|+|+++++|...++.+... |++|+++.+++++++.+. +++... .+ |..++ +... ..+.+|+
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 346 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAA-GDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV 346 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4789999999999999988776664 999999999888877664 344322 12 22211 1111 1236899
Q ss_pred EEeCCC
Q 021628 218 VFDAVG 223 (310)
Q Consensus 218 vi~~~g 223 (310)
+|+++|
T Consensus 347 li~nAg 352 (520)
T PRK06484 347 LVNNAG 352 (520)
T ss_pred EEECCC
Confidence 998876
No 324
>PRK05884 short chain dehydrogenase; Provisional
Probab=94.08 E-value=0.24 Score=41.23 Aligned_cols=70 Identities=20% Similarity=0.398 Sum_probs=45.4
Q ss_pred EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEE-eeCCCC-cccc----cCCCccEEEeCCC
Q 021628 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLA-IDYTKE-NIED----LPEKFDVVFDAVG 223 (310)
Q Consensus 153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~-~~~~~~-~~~~----~~~~~dvvi~~~g 223 (310)
+++|+|+++.+|.+.++.+... |.+|+++.+++++++.+ ++++...+ .|..++ +... ..+.+|++++++|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRND-GHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence 5899999999999988877664 99999999988877655 34443322 222211 1111 1125788887753
No 325
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.06 E-value=0.2 Score=39.39 Aligned_cols=73 Identities=23% Similarity=0.344 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh-hHHHHHHcCCCEEeeCCCCcccc-----------cCCCccE
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKENIED-----------LPEKFDV 217 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~-----------~~~~~dv 217 (310)
+|-.-+|+|+++++|.+++.-+... |+.+++.+...+ ..+.++++|-..++.+.+....+ .-+..|+
T Consensus 8 kglvalvtggasglg~ataerlakq-gasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQ-GASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhc-CceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence 4556689999999999988866664 999999988554 45666899977666543221111 1135789
Q ss_pred EEeCCC
Q 021628 218 VFDAVG 223 (310)
Q Consensus 218 vi~~~g 223 (310)
.++|+|
T Consensus 87 ~vncag 92 (260)
T KOG1199|consen 87 LVNCAG 92 (260)
T ss_pred eeeccc
Confidence 999988
No 326
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=94.03 E-value=0.15 Score=49.87 Aligned_cols=73 Identities=21% Similarity=0.453 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh---------------------hHHHHHHcCCCEEeeCC---C
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA---------------------KLDLLRSLGADLAIDYT---K 205 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~---------------------~~~~~~~~g~~~~~~~~---~ 205 (310)
.+++|+|+| +|+.|+.|+..+... |.+|+++++.+. +.+.++++|.+...+.. +
T Consensus 326 ~~~~VaIIG-aGpAGLsaA~~L~~~-G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 326 SDKRVAIIG-AGPAGLACADVLARN-GVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 578999999 999999999988885 999999887533 34555677765443321 1
Q ss_pred CcccccCCCccEEEeCCCC
Q 021628 206 ENIEDLPEKFDVVFDAVGQ 224 (310)
Q Consensus 206 ~~~~~~~~~~dvvi~~~g~ 224 (310)
-.......++|.||.++|.
T Consensus 404 i~~~~~~~~~DavilAtGa 422 (654)
T PRK12769 404 ISLESLLEDYDAVFVGVGT 422 (654)
T ss_pred CCHHHHHhcCCEEEEeCCC
Confidence 1112223478999998874
No 327
>PRK06953 short chain dehydrogenase; Provisional
Probab=94.02 E-value=0.19 Score=41.62 Aligned_cols=71 Identities=27% Similarity=0.476 Sum_probs=47.4
Q ss_pred CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCE-EeeCCCCc-ccc----c-CCCccEEEeCCC
Q 021628 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL-AIDYTKEN-IED----L-PEKFDVVFDAVG 223 (310)
Q Consensus 152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~-~~~~~~~~-~~~----~-~~~~dvvi~~~g 223 (310)
.+++|+|++|.+|...++.+... |++++++++++++.+.++..+... ..|..+.+ ... . ...+|+++.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRAD-GWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhC-CCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCC
Confidence 47899999999999888766664 999999999888777766555321 12222211 111 1 125899988765
No 328
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=94.01 E-value=0.33 Score=42.96 Aligned_cols=85 Identities=15% Similarity=0.192 Sum_probs=60.2
Q ss_pred CCCEEEEEcCCcchHHHHHHHHH-hhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC----
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAK-HVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---- 224 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~-~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---- 224 (310)
.|.++.|+| .|.+|...++.++ . +|.+|+..++.... +....++... .++.+....+|+|.-+.+.
T Consensus 144 ~gktvGIiG-~G~IG~~va~~l~~~-fgm~V~~~~~~~~~-~~~~~~~~~~------~~l~ell~~sDvv~lh~plt~~T 214 (323)
T PRK15409 144 HHKTLGIVG-MGRIGMALAQRAHFG-FNMPILYNARRHHK-EAEERFNARY------CDLDTLLQESDFVCIILPLTDET 214 (323)
T ss_pred CCCEEEEEc-ccHHHHHHHHHHHhc-CCCEEEEECCCCch-hhHHhcCcEe------cCHHHHHHhCCEEEEeCCCChHH
Confidence 578999999 9999999999998 7 59999887765322 2222334321 1344455678999887652
Q ss_pred --h--HHHHhhcccCCEEEEEeC
Q 021628 225 --C--DKALKAVKEGGRVVSIIG 243 (310)
Q Consensus 225 --~--~~~~~~l~~~G~~v~~g~ 243 (310)
+ ...++.|++++.+|.++.
T Consensus 215 ~~li~~~~l~~mk~ga~lIN~aR 237 (323)
T PRK15409 215 HHLFGAEQFAKMKSSAIFINAGR 237 (323)
T ss_pred hhccCHHHHhcCCCCeEEEECCC
Confidence 1 578899999999998863
No 329
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=93.99 E-value=0.29 Score=41.42 Aligned_cols=73 Identities=22% Similarity=0.379 Sum_probs=45.7
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh--HHHHHHcCCCE-Ee--eCCCC-cccc-------cCCCcc
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK--LDLLRSLGADL-AI--DYTKE-NIED-------LPEKFD 216 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~--~~~~~~~g~~~-~~--~~~~~-~~~~-------~~~~~d 216 (310)
.+++++|+|+++++|.+.++.+... |++|+++.+++.. .+.+++.+.+. .+ |-.++ +... ...++|
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKA-GADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4789999999999999988877764 9999888775422 23334444322 22 22111 1111 123689
Q ss_pred EEEeCCC
Q 021628 217 VVFDAVG 223 (310)
Q Consensus 217 vvi~~~g 223 (310)
++++++|
T Consensus 86 ~lv~~ag 92 (251)
T PRK12481 86 ILINNAG 92 (251)
T ss_pred EEEECCC
Confidence 9998876
No 330
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=93.98 E-value=0.2 Score=43.65 Aligned_cols=72 Identities=18% Similarity=0.273 Sum_probs=44.0
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecCh---hhHHHH-HHcC---CC-EE--eeCCCC-cccccCCCccE
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSST---AKLDLL-RSLG---AD-LA--IDYTKE-NIEDLPEKFDV 217 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~---~~~~~~-~~~g---~~-~~--~~~~~~-~~~~~~~~~dv 217 (310)
.+.+++|+| +|+.|.+++..+... |++ ++++.+++ ++.+.+ +++. .. .+ .+..+. +.......+|+
T Consensus 125 ~~k~vlI~G-AGGagrAia~~La~~-G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di 202 (289)
T PRK12548 125 KGKKLTVIG-AGGAATAIQVQCALD-GAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI 202 (289)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence 578999999 589999887766664 875 88888876 444333 3332 11 11 222111 11222346799
Q ss_pred EEeCCC
Q 021628 218 VFDAVG 223 (310)
Q Consensus 218 vi~~~g 223 (310)
+|+|++
T Consensus 203 lINaTp 208 (289)
T PRK12548 203 LVNATL 208 (289)
T ss_pred EEEeCC
Confidence 999975
No 331
>PRK06114 short chain dehydrogenase; Provisional
Probab=93.98 E-value=0.34 Score=41.02 Aligned_cols=37 Identities=22% Similarity=0.296 Sum_probs=31.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA 187 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~ 187 (310)
.+.+++|+|+++++|.+.++.+... |++|++++++++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~-G~~v~~~~r~~~ 43 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQA-GADVALFDLRTD 43 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCcc
Confidence 4679999999999999988877774 999999988643
No 332
>PRK06487 glycerate dehydrogenase; Provisional
Probab=93.93 E-value=0.29 Score=43.21 Aligned_cols=80 Identities=21% Similarity=0.327 Sum_probs=58.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----- 224 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~----- 224 (310)
.|.+|.|+| .|.+|...++.++. +|.+|+..++..... ... ..++.+.....|+|+.+.+.
T Consensus 147 ~gktvgIiG-~G~IG~~vA~~l~~-fgm~V~~~~~~~~~~------~~~------~~~l~ell~~sDiv~l~lPlt~~T~ 212 (317)
T PRK06487 147 EGKTLGLLG-HGELGGAVARLAEA-FGMRVLIGQLPGRPA------RPD------RLPLDELLPQVDALTLHCPLTEHTR 212 (317)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhh-CCCEEEEECCCCCcc------ccc------ccCHHHHHHhCCEEEECCCCChHHh
Confidence 467999999 99999999999998 499999887652210 000 11334445678888887762
Q ss_pred -h--HHHHhhcccCCEEEEEeC
Q 021628 225 -C--DKALKAVKEGGRVVSIIG 243 (310)
Q Consensus 225 -~--~~~~~~l~~~G~~v~~g~ 243 (310)
+ ...+..|+++..+|.++.
T Consensus 213 ~li~~~~~~~mk~ga~lIN~aR 234 (317)
T PRK06487 213 HLIGARELALMKPGALLINTAR 234 (317)
T ss_pred cCcCHHHHhcCCCCeEEEECCC
Confidence 1 688899999999998863
No 333
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.92 E-value=0.32 Score=41.89 Aligned_cols=36 Identities=25% Similarity=0.276 Sum_probs=28.7
Q ss_pred CCCEEEEEcCC--cchHHHHHHHHHhhcCCcEEEEecCh
Q 021628 150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSST 186 (310)
Q Consensus 150 ~g~~vlI~g~~--g~~G~~a~~la~~~~g~~vi~~~~~~ 186 (310)
.+.+++|+|++ +++|.+.+..+... |++|+++.+++
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~-G~~V~l~~r~~ 46 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAA-GAELAFTYQGD 46 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCch
Confidence 56899999975 79999977766664 99998877653
No 334
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=93.92 E-value=0.22 Score=42.27 Aligned_cols=74 Identities=19% Similarity=0.258 Sum_probs=48.4
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcC--CCEE-eeCCC--CcccccC-CCccEEEeCC
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG--ADLA-IDYTK--ENIEDLP-EKFDVVFDAV 222 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g--~~~~-~~~~~--~~~~~~~-~~~dvvi~~~ 222 (310)
..+.+|+|+|++|.+|...+..+... |.+|+++.+++++.......+ ...+ .+..+ ..+.... .++|+||.+.
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~ 93 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAK-GFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICAT 93 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhC-CCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECC
Confidence 34679999999999999988877764 899999999877654332111 2211 23222 1122223 4799999886
Q ss_pred C
Q 021628 223 G 223 (310)
Q Consensus 223 g 223 (310)
|
T Consensus 94 g 94 (251)
T PLN00141 94 G 94 (251)
T ss_pred C
Confidence 6
No 335
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=93.92 E-value=0.32 Score=40.93 Aligned_cols=42 Identities=21% Similarity=0.335 Sum_probs=34.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
++.+++|+|++|.+|...+..+... |++|++++++.++.+.+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~ 43 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEE-GAKVAVFDLNREAAEKV 43 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEecCCHHHHHHH
Confidence 4688999999999999988877764 99999999887765544
No 336
>PRK06198 short chain dehydrogenase; Provisional
Probab=93.91 E-value=0.27 Score=41.72 Aligned_cols=40 Identities=30% Similarity=0.439 Sum_probs=33.2
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLD 190 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~ 190 (310)
.+.+++|+|++|.+|...++.+... |++ |+++.+++++..
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~-G~~~V~~~~r~~~~~~ 45 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAER-GAAGLVICGRNAEKGE 45 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHC-CCCeEEEEcCCHHHHH
Confidence 5688999999999999988887774 888 888888766554
No 337
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.91 E-value=0.45 Score=41.06 Aligned_cols=95 Identities=23% Similarity=0.272 Sum_probs=65.6
Q ss_pred cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (310)
Q Consensus 131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (310)
..||+.......++..++ -.|.+|+|.|.+..+|.-.+.++... ++.|+++.... .++.
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~-~atVt~~hs~t-------------------~~l~ 196 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQA-GATVTICHSKT-------------------RDLA 196 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEecCCC-------------------CCHH
Confidence 446665445555555443 47999999998888899999988884 89888764321 1223
Q ss_pred ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628 210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~ 245 (310)
...+.+|+|+.++|... -.-++++++..++.+|...
T Consensus 197 ~~~~~ADIVV~avG~~~~i~~~~ik~gavVIDVGin~ 233 (285)
T PRK14189 197 AHTRQADIVVAAVGKRNVLTADMVKPGATVIDVGMNR 233 (285)
T ss_pred HHhhhCCEEEEcCCCcCccCHHHcCCCCEEEEccccc
Confidence 33467899999998431 1227889999999998543
No 338
>TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases. Note that a number of non-orthologous genes which are members of pfam03737 have been erroneously annotated as MenG methyltransferases.
Probab=93.90 E-value=0.93 Score=37.36 Aligned_cols=97 Identities=23% Similarity=0.274 Sum_probs=62.5
Q ss_pred HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcC--CcEEEEecChhhHHHHHHcCC----CEEeeCCCCcccccCCCccE
Q 021628 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRSLGA----DLAIDYTKENIEDLPEKFDV 217 (310)
Q Consensus 144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g--~~vi~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~dv 217 (310)
......++.+|+-+| +|. |..+..+++.. + .+++.++.+++..+.+++... ..+...+........+.+|+
T Consensus 33 ~~~~~~~~~~vldiG-~G~-G~~~~~~~~~~-~~~~~~~~iD~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~ 109 (223)
T TIGR01934 33 KLIGVFKGQKVLDVA-CGT-GDLAIELAKSA-PDRGKVTGVDFSSEMLEVAKKKSELPLNIEFIQADAEALPFEDNSFDA 109 (223)
T ss_pred HHhccCCCCeEEEeC-CCC-ChhHHHHHHhc-CCCceEEEEECCHHHHHHHHHHhccCCCceEEecchhcCCCCCCcEEE
Confidence 344455889999998 554 77788888874 5 488899999888777754321 12222211111112346898
Q ss_pred EEeCCC-----C----hHHHHhhcccCCEEEEEeC
Q 021628 218 VFDAVG-----Q----CDKALKAVKEGGRVVSIIG 243 (310)
Q Consensus 218 vi~~~g-----~----~~~~~~~l~~~G~~v~~g~ 243 (310)
|+...+ . ++.+.+.|+++|+++.+..
T Consensus 110 i~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 144 (223)
T TIGR01934 110 VTIAFGLRNVTDIQKALREMYRVLKPGGRLVILEF 144 (223)
T ss_pred EEEeeeeCCcccHHHHHHHHHHHcCCCcEEEEEEe
Confidence 876432 1 3677889999999998764
No 339
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=93.89 E-value=0.33 Score=42.35 Aligned_cols=63 Identities=27% Similarity=0.392 Sum_probs=52.7
Q ss_pred HHHHH----HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec---ChhhHHHHHHcCCCEEee
Q 021628 139 AYEGL----ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGADLAID 202 (310)
Q Consensus 139 a~~al----~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~---~~~~~~~~~~~g~~~~~~ 202 (310)
||.++ +...++||.++||-+-+|..|...+..+... |++++++.. +.||...++.+|+..+..
T Consensus 87 a~sMi~~Ae~~G~i~pg~stliEpTSGNtGigLA~~~a~~-Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~t 156 (362)
T KOG1252|consen 87 AWSMIEDAEKKGLITPGKSTLIEPTSGNTGIGLAYMAALR-GYKCIITMPEKMSKEKRILLRALGAEIILT 156 (362)
T ss_pred HHHHHHHHHHcCCccCCceEEEecCCCchHHHHHHHHHHc-CceEEEEechhhhHHHHHHHHHcCCEEEec
Confidence 55554 4678999999999999999999999999985 999998864 788999999999876653
No 340
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.88 E-value=0.44 Score=41.35 Aligned_cols=95 Identities=21% Similarity=0.208 Sum_probs=65.5
Q ss_pred cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (310)
Q Consensus 131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (310)
..||+....+..++..++ -.|.+|+|.|.+..+|.-...++... ++.|+++-+... ++.
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~-~atVtv~hs~T~-------------------~l~ 196 (297)
T PRK14186 137 LRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAA-NATVTIAHSRTQ-------------------DLA 196 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHC-CCEEEEeCCCCC-------------------CHH
Confidence 446665445555555544 47999999999999999988888874 888877743222 222
Q ss_pred ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628 210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~ 245 (310)
...+.+|+++.++|..+ -.-+++++|..++.+|...
T Consensus 197 ~~~~~ADIvIsAvGkp~~i~~~~ik~gavVIDvGin~ 233 (297)
T PRK14186 197 SITREADILVAAAGRPNLIGAEMVKPGAVVVDVGIHR 233 (297)
T ss_pred HHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccc
Confidence 23456889999998542 2246788899999998554
No 341
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.84 E-value=0.16 Score=42.77 Aligned_cols=42 Identities=21% Similarity=0.342 Sum_probs=35.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|++|.+|...++.+... |.+|+++++++++.+.+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~-G~~V~~~~r~~~~~~~~ 45 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAE-GARVVVTDRNEEAAERV 45 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 4579999999999999988877774 99999999988776555
No 342
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.76 E-value=0.83 Score=39.58 Aligned_cols=77 Identities=25% Similarity=0.278 Sum_probs=53.1
Q ss_pred cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCChH-
Q 021628 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCD- 226 (310)
Q Consensus 148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~~- 226 (310)
.-.|.+|+|+|..+.+|...+.++... |+.|+++.+..+.+. +..+++|++|+++|...
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~-gatVtv~~~~t~~L~-------------------~~~~~aDIvI~AtG~~~~ 215 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNA-NATVTICHSRTQNLP-------------------ELVKQADIIVGAVGKPEL 215 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhC-CCEEEEEeCCchhHH-------------------HHhccCCEEEEccCCCCc
Confidence 457899999995445999988888875 887777765322221 11257889999998432
Q ss_pred HHHhhcccCCEEEEEeCC
Q 021628 227 KALKAVKEGGRVVSIIGS 244 (310)
Q Consensus 227 ~~~~~l~~~G~~v~~g~~ 244 (310)
-..+.++++..++.++..
T Consensus 216 v~~~~lk~gavViDvg~n 233 (283)
T PRK14192 216 IKKDWIKQGAVVVDAGFH 233 (283)
T ss_pred CCHHHcCCCCEEEEEEEe
Confidence 113568888888888754
No 343
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=93.75 E-value=0.24 Score=38.31 Aligned_cols=86 Identities=21% Similarity=0.314 Sum_probs=54.5
Q ss_pred EEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCC------cc---cccCCCccEEEeCCCC
Q 021628 154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE------NI---EDLPEKFDVVFDAVGQ 224 (310)
Q Consensus 154 vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~------~~---~~~~~~~dvvi~~~g~ 224 (310)
|+|+| +|.+|.+.+..++.. |.+|..+.+.+ +.+.+++.|........+. .. ......+|++|-|+-+
T Consensus 1 I~I~G-~GaiG~~~a~~L~~~-g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa 77 (151)
T PF02558_consen 1 ILIIG-AGAIGSLYAARLAQA-GHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVKA 77 (151)
T ss_dssp EEEES-TSHHHHHHHHHHHHT-TCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SSG
T ss_pred CEEEC-cCHHHHHHHHHHHHC-CCceEEEEccc-cHHhhhheeEEEEecccceecccccccCcchhccCCCcEEEEEecc
Confidence 68999 999998877766664 99999999988 7777776663221111000 00 1123579999999752
Q ss_pred --h----HHHHhhcccCCEEEEEe
Q 021628 225 --C----DKALKAVKEGGRVVSII 242 (310)
Q Consensus 225 --~----~~~~~~l~~~G~~v~~g 242 (310)
. +.....+.++..++++.
T Consensus 78 ~~~~~~l~~l~~~~~~~t~iv~~q 101 (151)
T PF02558_consen 78 YQLEQALQSLKPYLDPNTTIVSLQ 101 (151)
T ss_dssp GGHHHHHHHHCTGEETTEEEEEES
T ss_pred cchHHHHHHHhhccCCCcEEEEEe
Confidence 2 34445666666676663
No 344
>PRK04266 fibrillarin; Provisional
Probab=93.74 E-value=1.4 Score=36.92 Aligned_cols=127 Identities=20% Similarity=0.233 Sum_probs=70.9
Q ss_pred HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCCEEeeCCCCcc---cccCCCcc
Q 021628 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKENI---EDLPEKFD 216 (310)
Q Consensus 144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~---~~~~~~~d 216 (310)
+...+++|++|+=.|. +.|..+..+++.....+|++++.+++.++.+.+ ..--..+..+.... ......+|
T Consensus 66 ~~l~i~~g~~VlD~G~--G~G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~~~~~l~~~~D 143 (226)
T PRK04266 66 KNFPIKKGSKVLYLGA--ASGTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPERYAHVVEKVD 143 (226)
T ss_pred hhCCCCCCCEEEEEcc--CCCHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcchhhhccccCC
Confidence 4578899999998883 335556666766422478999999987665432 21111222221111 11234699
Q ss_pred EEEeCCCC-------hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCeeEE
Q 021628 217 VVFDAVGQ-------CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAI 276 (310)
Q Consensus 217 vvi~~~g~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (310)
+++.-... ++.+.+.|+|+|+++..- +.. ..++.. .....++..++.+++..+...
T Consensus 144 ~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI~v-~~~--~~d~~~-~~~~~~~~~~~~l~~aGF~~i 206 (226)
T PRK04266 144 VIYQDVAQPNQAEIAIDNAEFFLKDGGYLLLAI-KAR--SIDVTK-DPKEIFKEEIRKLEEGGFEIL 206 (226)
T ss_pred EEEECCCChhHHHHHHHHHHHhcCCCcEEEEEE-ecc--cccCcC-CHHHHHHHHHHHHHHcCCeEE
Confidence 99854432 357778999999999841 110 011100 012345556677776555543
No 345
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.74 E-value=0.35 Score=45.35 Aligned_cols=69 Identities=25% Similarity=0.369 Sum_probs=48.4
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh-h----HHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-K----LDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG 223 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~-~----~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g 223 (310)
..+.+|+|+| .|.+|+.++.+++.. |.+|++++.++. . .+.+++.|.....+.... ....+|+|+-+.|
T Consensus 14 ~~~~~v~viG-~G~~G~~~A~~L~~~-G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~----~~~~~D~Vv~s~G 87 (480)
T PRK01438 14 WQGLRVVVAG-LGVSGFAAADALLEL-GARVTVVDDGDDERHRALAAILEALGATVRLGPGPT----LPEDTDLVVTSPG 87 (480)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc----ccCCCCEEEECCC
Confidence 3467999999 899999999998885 999999886442 2 234566676554432221 2346889988877
No 346
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=93.73 E-value=0.79 Score=37.93 Aligned_cols=91 Identities=18% Similarity=0.134 Sum_probs=59.3
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCE-----------------EeeCCCCcccc
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-----------------AIDYTKENIED 210 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-----------------~~~~~~~~~~~ 210 (310)
.++.+||+.| -+.|.-++-+|.. |.+|+.++.++...+.+ ++.+... ++..+-..+..
T Consensus 33 ~~~~rvLd~G--CG~G~da~~LA~~--G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 108 (213)
T TIGR03840 33 PAGARVFVPL--CGKSLDLAWLAEQ--GHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA 108 (213)
T ss_pred CCCCeEEEeC--CCchhHHHHHHhC--CCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence 5677999998 4468888888874 99999999999988775 3333210 01111001111
Q ss_pred -cCCCccEEEeCCC--C---------hHHHHhhcccCCEEEEEeC
Q 021628 211 -LPEKFDVVFDAVG--Q---------CDKALKAVKEGGRVVSIIG 243 (310)
Q Consensus 211 -~~~~~dvvi~~~g--~---------~~~~~~~l~~~G~~v~~g~ 243 (310)
....+|.|+|+.. + ...+.+.|+|+|+++....
T Consensus 109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 1235899999753 1 2578899999998766643
No 347
>PRK08226 short chain dehydrogenase; Provisional
Probab=93.72 E-value=0.36 Score=41.04 Aligned_cols=40 Identities=23% Similarity=0.340 Sum_probs=33.0
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD 190 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~ 190 (310)
.+.+++|+|++|.+|...+..+... |++|+++.++++..+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~-G~~Vv~~~r~~~~~~ 44 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARH-GANLILLDISPEIEK 44 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEecCCHHHHH
Confidence 4689999999999999988877774 999999988765433
No 348
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=93.72 E-value=0.43 Score=45.30 Aligned_cols=86 Identities=23% Similarity=0.366 Sum_probs=61.6
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----- 224 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~----- 224 (310)
.|.+|.|+| .|.+|...++.++.. |.+|++.++... .+...+++.... .++.+....+|+|+-+.+.
T Consensus 137 ~gktvgIiG-~G~IG~~vA~~l~~f-G~~V~~~d~~~~-~~~~~~~g~~~~-----~~l~ell~~aDvV~l~lPlt~~T~ 208 (525)
T TIGR01327 137 YGKTLGVIG-LGRIGSIVAKRAKAF-GMKVLAYDPYIS-PERAEQLGVELV-----DDLDELLARADFITVHTPLTPETR 208 (525)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEECCCCC-hhHHHhcCCEEc-----CCHHHHHhhCCEEEEccCCChhhc
Confidence 568999999 999999999999984 999999987422 222344553211 1334445678999988762
Q ss_pred --h-HHHHhhcccCCEEEEEeC
Q 021628 225 --C-DKALKAVKEGGRVVSIIG 243 (310)
Q Consensus 225 --~-~~~~~~l~~~G~~v~~g~ 243 (310)
+ ...+..|+++..++.++.
T Consensus 209 ~li~~~~l~~mk~ga~lIN~aR 230 (525)
T TIGR01327 209 GLIGAEELAKMKKGVIIVNCAR 230 (525)
T ss_pred cCcCHHHHhcCCCCeEEEEcCC
Confidence 1 567888999998888863
No 349
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=93.71 E-value=0.78 Score=38.29 Aligned_cols=97 Identities=25% Similarity=0.249 Sum_probs=62.4
Q ss_pred HhcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHH----cCCCE--EeeCCCCcccccCCCcc
Q 021628 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGADL--AIDYTKENIEDLPEKFD 216 (310)
Q Consensus 144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~~d 216 (310)
....++++++||=+| .+.|..+..+++..+ +.+++.++.+++..+.+++ .+.+. ++..+........+.+|
T Consensus 39 ~~l~~~~~~~vLDiG--cG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 116 (231)
T TIGR02752 39 KRMNVQAGTSALDVC--CGTADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNAMELPFDDNSFD 116 (231)
T ss_pred HhcCCCCCCEEEEeC--CCcCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEechhcCCCCCCCcc
Confidence 456778899999998 345667777777631 3589999999888776643 22221 22222222222234789
Q ss_pred EEEeCCC-----C----hHHHHhhcccCCEEEEEe
Q 021628 217 VVFDAVG-----Q----CDKALKAVKEGGRVVSII 242 (310)
Q Consensus 217 vvi~~~g-----~----~~~~~~~l~~~G~~v~~g 242 (310)
+|+.+.. . ++++.+.|+++|+++...
T Consensus 117 ~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 151 (231)
T TIGR02752 117 YVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLE 151 (231)
T ss_pred EEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEE
Confidence 9886532 1 367788999999998764
No 350
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.71 E-value=0.45 Score=40.97 Aligned_cols=95 Identities=22% Similarity=0.262 Sum_probs=66.1
Q ss_pred cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (310)
Q Consensus 131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (310)
..||+.......++..+. -.|.+|+|.|.+..+|.-..+++... ++.|+++-..- .++.
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~-~atVtichs~T-------------------~~l~ 195 (284)
T PRK14170 136 FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNE-NATVTIAHSRT-------------------KDLP 195 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEEEeCCCC-------------------CCHH
Confidence 456665555555555544 46999999999999999988888874 88887664322 1223
Q ss_pred ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628 210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~ 245 (310)
+..+.+|+++.++|... -.-+++++|..++.+|...
T Consensus 196 ~~~~~ADIvI~AvG~~~~i~~~~vk~GavVIDvGin~ 232 (284)
T PRK14170 196 QVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGMDR 232 (284)
T ss_pred HHHhhCCEEEEecCCcCccCHHHcCCCCEEEEccCcc
Confidence 33457899999999542 2236788999999998654
No 351
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=93.70 E-value=0.17 Score=42.37 Aligned_cols=68 Identities=25% Similarity=0.361 Sum_probs=49.9
Q ss_pred EEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh--hHHHHHHcCCCEEeeCCCC---cccccCCCccEEEeCCC
Q 021628 154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA--KLDLLRSLGADLAIDYTKE---NIEDLPEKFDVVFDAVG 223 (310)
Q Consensus 154 vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~--~~~~~~~~g~~~~~~~~~~---~~~~~~~~~dvvi~~~g 223 (310)
|+|+|++|.+|...++.+.. .+.+|.+++|+.. ..+.+++.|+..+ ..+-. .+....+|+|.||.+.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~-~~~~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~~~~~l~~al~g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLS-AGFSVRALVRDPSSDRAQQLQALGAEVV-EADYDDPESLVAALKGVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHH-TTGCEEEEESSSHHHHHHHHHHTTTEEE-ES-TT-HHHHHHHHTTCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHh-CCCCcEEEEeccchhhhhhhhcccceEe-ecccCCHHHHHHHHcCCceEEeecC
Confidence 78999999999999998887 4899999999764 3556677887544 32222 22333569999998877
No 352
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=93.65 E-value=0.23 Score=43.80 Aligned_cols=74 Identities=22% Similarity=0.295 Sum_probs=46.5
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH---c-CC--C-EEe--eCCCC-cccccCCCccEE
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS---L-GA--D-LAI--DYTKE-NIEDLPEKFDVV 218 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~---~-g~--~-~~~--~~~~~-~~~~~~~~~dvv 218 (310)
..+.+|+|+|++|.+|...+..+... |.+|++++++.++...... . +. . .++ +..+. .......++|+|
T Consensus 3 ~~~k~vlVtG~~G~IG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 81 (325)
T PLN02989 3 DGGKVVCVTGASGYIASWIVKLLLFR-GYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETV 81 (325)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHC-CCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEE
Confidence 35789999999999999988877774 9999888876654332211 1 11 1 122 21111 122223468999
Q ss_pred EeCCC
Q 021628 219 FDAVG 223 (310)
Q Consensus 219 i~~~g 223 (310)
|++++
T Consensus 82 ih~A~ 86 (325)
T PLN02989 82 FHTAS 86 (325)
T ss_pred EEeCC
Confidence 99876
No 353
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=93.64 E-value=1.3 Score=36.39 Aligned_cols=89 Identities=22% Similarity=0.289 Sum_probs=56.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh-hHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCCh---
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC--- 225 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~--- 225 (310)
.|.+|+|.| .|.+|...+..+... |++|++++.+.. .+..+.+.+.-...... .. .....++++||-+.+..
T Consensus 8 ~gk~vlVvG-gG~va~rk~~~Ll~~-ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~-~~-~~dl~~~~lVi~at~d~~ln 83 (205)
T TIGR01470 8 EGRAVLVVG-GGDVALRKARLLLKA-GAQLRVIAEELESELTLLAEQGGITWLARC-FD-ADILEGAFLVIAATDDEELN 83 (205)
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHHC-CCEEEEEcCCCCHHHHHHHHcCCEEEEeCC-CC-HHHhCCcEEEEECCCCHHHH
Confidence 467999999 899999988888874 999998876443 34444443421122111 11 12235899999998853
Q ss_pred HHHHhhcccCCEEEEEe
Q 021628 226 DKALKAVKEGGRVVSII 242 (310)
Q Consensus 226 ~~~~~~l~~~G~~v~~g 242 (310)
.......+..|..+...
T Consensus 84 ~~i~~~a~~~~ilvn~~ 100 (205)
T TIGR01470 84 RRVAHAARARGVPVNVV 100 (205)
T ss_pred HHHHHHHHHcCCEEEEC
Confidence 34555555667776553
No 354
>PLN02336 phosphoethanolamine N-methyltransferase
Probab=93.62 E-value=1.2 Score=41.64 Aligned_cols=96 Identities=18% Similarity=0.195 Sum_probs=63.3
Q ss_pred HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc--CCC---EEeeCCCCcccccCCCccEE
Q 021628 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL--GAD---LAIDYTKENIEDLPEKFDVV 218 (310)
Q Consensus 144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~--g~~---~~~~~~~~~~~~~~~~~dvv 218 (310)
+...++++++||=+| +|. |..+..+++.. +.+++.++.+++.++.+++. +.. .+...+-.......+.+|+|
T Consensus 260 ~~~~~~~~~~vLDiG-cG~-G~~~~~la~~~-~~~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I 336 (475)
T PLN02336 260 DKLDLKPGQKVLDVG-CGI-GGGDFYMAENF-DVHVVGIDLSVNMISFALERAIGRKCSVEFEVADCTKKTYPDNSFDVI 336 (475)
T ss_pred HhcCCCCCCEEEEEe-ccC-CHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhhcCCCceEEEEcCcccCCCCCCCEEEE
Confidence 344567889999998 554 77778888874 88999999999888777542 211 11111111111112469999
Q ss_pred EeCCC-----C----hHHHHhhcccCCEEEEEe
Q 021628 219 FDAVG-----Q----CDKALKAVKEGGRVVSII 242 (310)
Q Consensus 219 i~~~g-----~----~~~~~~~l~~~G~~v~~g 242 (310)
+.... . +.++.+.|+|+|+++...
T Consensus 337 ~s~~~l~h~~d~~~~l~~~~r~LkpgG~l~i~~ 369 (475)
T PLN02336 337 YSRDTILHIQDKPALFRSFFKWLKPGGKVLISD 369 (475)
T ss_pred EECCcccccCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 87522 1 368889999999998764
No 355
>PRK07856 short chain dehydrogenase; Provisional
Probab=93.62 E-value=0.31 Score=41.22 Aligned_cols=38 Identities=26% Similarity=0.485 Sum_probs=32.5
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK 188 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~ 188 (310)
.+.+++|+|++|.+|...++.+... |++|+++++++++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~-g~~v~~~~r~~~~ 42 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAA-GATVVVCGRRAPE 42 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCChhh
Confidence 4789999999999999988877764 9999999987655
No 356
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.62 E-value=0.43 Score=40.44 Aligned_cols=73 Identities=22% Similarity=0.328 Sum_probs=45.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHHHHcCCCEE-eeCCCC-cccc-------cCCCccEEE
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLA-IDYTKE-NIED-------LPEKFDVVF 219 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~~~~g~~~~-~~~~~~-~~~~-------~~~~~dvvi 219 (310)
.+.+++|+|+++++|.+.++.+... |++|+++.+ +++..+.+++.+...+ .|..++ +... ..+++|++|
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLRE-GAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999999999999988877664 899887765 4444444444332211 222211 1111 123689999
Q ss_pred eCCC
Q 021628 220 DAVG 223 (310)
Q Consensus 220 ~~~g 223 (310)
.++|
T Consensus 85 ~~ag 88 (255)
T PRK06463 85 NNAG 88 (255)
T ss_pred ECCC
Confidence 8875
No 357
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=93.59 E-value=0.44 Score=39.89 Aligned_cols=73 Identities=25% Similarity=0.395 Sum_probs=47.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCC-EEeeCCCCcccc----------cCCCccE
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-LAIDYTKENIED----------LPEKFDV 217 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~-~~~~~~~~~~~~----------~~~~~dv 217 (310)
.+.+++|+|++|.+|...+..+... |..|+...++.++++.+ .+++.. .++..+-.+... ...++|.
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQ-GAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4679999999999999988877664 88888888877776655 334422 122221111111 1236899
Q ss_pred EEeCCC
Q 021628 218 VFDAVG 223 (310)
Q Consensus 218 vi~~~g 223 (310)
+|.++|
T Consensus 84 vi~~ag 89 (245)
T PRK12936 84 LVNNAG 89 (245)
T ss_pred EEECCC
Confidence 999876
No 358
>PRK05854 short chain dehydrogenase; Provisional
Probab=93.55 E-value=0.18 Score=44.33 Aligned_cols=42 Identities=24% Similarity=0.335 Sum_probs=34.7
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.|.+++|+|+++++|.+.+..+... |++|+++.+++++.+.+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~-G~~Vil~~R~~~~~~~~ 54 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAA-GAEVILPVRNRAKGEAA 54 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 4689999999999999988766664 99999999988775544
No 359
>PRK07062 short chain dehydrogenase; Provisional
Probab=93.55 E-value=0.19 Score=42.84 Aligned_cols=42 Identities=26% Similarity=0.461 Sum_probs=35.6
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|+++++|.+.++.+... |++|+++.+++++++.+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~ 48 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEA-GASVAICGRDEERLASA 48 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHH
Confidence 4789999999999999988877774 99999999988776544
No 360
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=93.54 E-value=0.45 Score=41.14 Aligned_cols=84 Identities=14% Similarity=0.148 Sum_probs=54.4
Q ss_pred EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC------hH
Q 021628 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ------CD 226 (310)
Q Consensus 153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~------~~ 226 (310)
+|.|+| .|.+|...+..++.. |.+|++.++++++.+.+.+.|...... .+. +....+|+||.|++. .+
T Consensus 2 ~I~IIG-~G~mG~sla~~L~~~-g~~V~~~d~~~~~~~~a~~~g~~~~~~---~~~-~~~~~aDlVilavp~~~~~~~~~ 75 (279)
T PRK07417 2 KIGIVG-LGLIGGSLGLDLRSL-GHTVYGVSRRESTCERAIERGLVDEAS---TDL-SLLKDCDLVILALPIGLLLPPSE 75 (279)
T ss_pred eEEEEe-ecHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHCCCccccc---CCH-hHhcCCCEEEEcCCHHHHHHHHH
Confidence 588999 899998766666663 889999999999888887776321111 111 124578999999872 13
Q ss_pred HHHhhcccCCEEEEEe
Q 021628 227 KALKAVKEGGRVVSII 242 (310)
Q Consensus 227 ~~~~~l~~~G~~v~~g 242 (310)
.....++++..+..++
T Consensus 76 ~l~~~l~~~~ii~d~~ 91 (279)
T PRK07417 76 QLIPALPPEAIVTDVG 91 (279)
T ss_pred HHHHhCCCCcEEEeCc
Confidence 3444455554454443
No 361
>PRK07063 short chain dehydrogenase; Provisional
Probab=93.53 E-value=0.19 Score=42.68 Aligned_cols=42 Identities=31% Similarity=0.374 Sum_probs=35.2
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|+++++|...+..+... |++|+++++++++.+.+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~-G~~vv~~~r~~~~~~~~ 47 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFARE-GAAVALADLDAALAERA 47 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 4689999999999999988877774 99999999988776554
No 362
>PRK12828 short chain dehydrogenase; Provisional
Probab=93.52 E-value=0.2 Score=41.78 Aligned_cols=40 Identities=28% Similarity=0.410 Sum_probs=33.7
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD 190 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~ 190 (310)
++.+++|+|++|.+|...++.+... |++|+++++++++..
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~-G~~v~~~~r~~~~~~ 45 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAAR-GARVALIGRGAAPLS 45 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHC-CCeEEEEeCChHhHH
Confidence 4789999999999999988877774 999999999776543
No 363
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.51 E-value=0.31 Score=41.71 Aligned_cols=36 Identities=28% Similarity=0.303 Sum_probs=28.0
Q ss_pred CCCEEEEEcCCc--chHHHHHHHHHhhcCCcEEEEecCh
Q 021628 150 AGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSST 186 (310)
Q Consensus 150 ~g~~vlI~g~~g--~~G~~a~~la~~~~g~~vi~~~~~~ 186 (310)
.|.+++|+|+++ ++|.+.+..+... |++|++..+++
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~-G~~vil~~r~~ 42 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQND 42 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHC-CCEEEEEecch
Confidence 478999999765 8999877766554 89998887763
No 364
>PRK08655 prephenate dehydrogenase; Provisional
Probab=93.49 E-value=0.42 Score=44.24 Aligned_cols=84 Identities=24% Similarity=0.406 Sum_probs=51.8
Q ss_pred EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhH-HHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC------h
Q 021628 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL-DLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ------C 225 (310)
Q Consensus 153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~------~ 225 (310)
+|.|+|+.|.+|.+.+..++.. |.+|++.++++++. +.+.++|.... .+..+....+|+||-|++. +
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~-G~~V~v~~r~~~~~~~~a~~~gv~~~-----~~~~e~~~~aDvVIlavp~~~~~~vl 75 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEK-GFEVIVTGRDPKKGKEVAKELGVEYA-----NDNIDAAKDADIVIISVPINVTEDVI 75 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHC-CCEEEEEECChHHHHHHHHHcCCeec-----cCHHHHhccCCEEEEecCHHHHHHHH
Confidence 5889987899999888888874 88899999988774 44566665211 1112223456777766652 1
Q ss_pred HHHHhhcccCCEEEEEe
Q 021628 226 DKALKAVKEGGRVVSII 242 (310)
Q Consensus 226 ~~~~~~l~~~G~~v~~g 242 (310)
......++++..++.++
T Consensus 76 ~~l~~~l~~~~iViDvs 92 (437)
T PRK08655 76 KEVAPHVKEGSLLMDVT 92 (437)
T ss_pred HHHHhhCCCCCEEEEcc
Confidence 23333445555555554
No 365
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=93.48 E-value=3.6 Score=34.72 Aligned_cols=113 Identities=21% Similarity=0.226 Sum_probs=72.7
Q ss_pred HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHH----HcCCCEEeeCCCCcccc--cCCCcc
Q 021628 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLR----SLGADLAIDYTKENIED--LPEKFD 216 (310)
Q Consensus 144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~--~~~~~d 216 (310)
...++.||++|+=.| .+.|.+++-+|...+. .+|+.....++..+.++ +++....+.....|..+ ..+.+|
T Consensus 88 ~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~~~~~~vD 165 (256)
T COG2519 88 ARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVREGIDEEDVD 165 (256)
T ss_pred HHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEeccccccccccccC
Confidence 467889999999988 4557888888877634 37888888888776663 34533212111122211 123788
Q ss_pred EEEeCCCC----hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcC
Q 021628 217 VVFDAVGQ----CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESG 271 (310)
Q Consensus 217 vvi~~~g~----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (310)
.+|==.+. ++.+.+.|.++|.++.+.. .-+..+...+-+++.
T Consensus 166 av~LDmp~PW~~le~~~~~Lkpgg~~~~y~P-------------~veQv~kt~~~l~~~ 211 (256)
T COG2519 166 AVFLDLPDPWNVLEHVSDALKPGGVVVVYSP-------------TVEQVEKTVEALRER 211 (256)
T ss_pred EEEEcCCChHHHHHHHHHHhCCCcEEEEEcC-------------CHHHHHHHHHHHHhc
Confidence 77644442 4889999999999998863 335555555555554
No 366
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.48 E-value=0.2 Score=42.20 Aligned_cols=42 Identities=26% Similarity=0.385 Sum_probs=35.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
++.+++|+|++|.+|...++.+... |++|+++++++++.+.+
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~-G~~vi~~~r~~~~~~~~ 45 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQK-GAKLALIDLNQEKLEEA 45 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 4789999999999999999888774 99999999887765544
No 367
>KOG1540 consensus Ubiquinone biosynthesis methyltransferase COQ5 [Coenzyme transport and metabolism]
Probab=93.48 E-value=1.1 Score=37.81 Aligned_cols=98 Identities=23% Similarity=0.319 Sum_probs=63.3
Q ss_pred ccCCCCEEEEEcCCcchHHHHHHHHHhhcC------CcEEEEecChhhHHHHHHc----C--CC--E-EeeCCCCccccc
Q 021628 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFG------ASKVAATSSTAKLDLLRSL----G--AD--L-AIDYTKENIEDL 211 (310)
Q Consensus 147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g------~~vi~~~~~~~~~~~~~~~----g--~~--~-~~~~~~~~~~~~ 211 (310)
++.|++..=++-.+|+.|-.|-.+.+.... .+|++.+.|++.+...++- + .+ . .+..+.+++...
T Consensus 95 ~L~p~~~m~~lDvaGGTGDiaFril~~v~s~~~~~~~~V~v~Dinp~mL~vgkqRa~~~~l~~~~~~~w~~~dAE~LpFd 174 (296)
T KOG1540|consen 95 KLGPGKGMKVLDVAGGTGDIAFRILRHVKSQFGDRESKVTVLDINPHMLAVGKQRAKKRPLKASSRVEWVEGDAEDLPFD 174 (296)
T ss_pred ccCCCCCCeEEEecCCcchhHHHHHHhhccccCCCCceEEEEeCCHHHHHHHHHHHhhcCCCcCCceEEEeCCcccCCCC
Confidence 444444333333368888888888887643 6799999999988776431 2 22 1 223344444444
Q ss_pred CCCccEEEeCCC-----C----hHHHHhhcccCCEEEEEeCC
Q 021628 212 PEKFDVVFDAVG-----Q----CDKALKAVKEGGRVVSIIGS 244 (310)
Q Consensus 212 ~~~~dvvi~~~g-----~----~~~~~~~l~~~G~~v~~g~~ 244 (310)
...+|.+--+.| + ++++.+.|+|||||..+-.+
T Consensus 175 d~s~D~yTiafGIRN~th~~k~l~EAYRVLKpGGrf~cLeFs 216 (296)
T KOG1540|consen 175 DDSFDAYTIAFGIRNVTHIQKALREAYRVLKPGGRFSCLEFS 216 (296)
T ss_pred CCcceeEEEecceecCCCHHHHHHHHHHhcCCCcEEEEEEcc
Confidence 456777766665 2 47999999999999977654
No 368
>COG3963 Phospholipid N-methyltransferase [Lipid metabolism]
Probab=93.48 E-value=1.2 Score=35.08 Aligned_cols=114 Identities=21% Similarity=0.174 Sum_probs=78.5
Q ss_pred hhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHh-hcCCcEEEEecChhhHHHHHHc-CCCEEeeCCC
Q 021628 128 EAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKH-VFGASKVAATSSTAKLDLLRSL-GADLAIDYTK 205 (310)
Q Consensus 128 ~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~-~~g~~vi~~~~~~~~~~~~~~~-g~~~~~~~~~ 205 (310)
-.|.+|.+-.+|-.+.....++-|-.|+-+|. | .|..+-.++.. .....++++.-+.+-...+.+. ....+++.+.
T Consensus 26 VGaI~PsSs~lA~~M~s~I~pesglpVlElGP-G-TGV~TkaIL~~gv~~~~L~~iE~~~dF~~~L~~~~p~~~ii~gda 103 (194)
T COG3963 26 VGAILPSSSILARKMASVIDPESGLPVLELGP-G-TGVITKAILSRGVRPESLTAIEYSPDFVCHLNQLYPGVNIINGDA 103 (194)
T ss_pred eeeecCCcHHHHHHHHhccCcccCCeeEEEcC-C-ccHhHHHHHhcCCCccceEEEEeCHHHHHHHHHhCCCccccccch
Confidence 44556667667777778888899999999983 3 35454444443 3245677888888877777554 3445777765
Q ss_pred Ccccc-----cCCCccEEEeCCC--C---------hHHHHhhcccCCEEEEEeC
Q 021628 206 ENIED-----LPEKFDVVFDAVG--Q---------CDKALKAVKEGGRVVSIIG 243 (310)
Q Consensus 206 ~~~~~-----~~~~~dvvi~~~g--~---------~~~~~~~l~~~G~~v~~g~ 243 (310)
.+... ....+|.||++.+ + ++.+...++.+|.++++..
T Consensus 104 ~~l~~~l~e~~gq~~D~viS~lPll~~P~~~~iaile~~~~rl~~gg~lvqftY 157 (194)
T COG3963 104 FDLRTTLGEHKGQFFDSVISGLPLLNFPMHRRIAILESLLYRLPAGGPLVQFTY 157 (194)
T ss_pred hhHHHHHhhcCCCeeeeEEeccccccCcHHHHHHHHHHHHHhcCCCCeEEEEEe
Confidence 55431 1225899999986 2 2788899999999998854
No 369
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=93.44 E-value=0.99 Score=34.61 Aligned_cols=93 Identities=23% Similarity=0.238 Sum_probs=63.3
Q ss_pred cccchHHHHHHHHHhcc-cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628 131 SLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (310)
Q Consensus 131 ~~~~~~~ta~~al~~~~-~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (310)
.+||........++..+ --.|.+|+|+|.+..+|.-.+.++... |+.|+++.++...++
T Consensus 7 ~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~-gatV~~~~~~t~~l~------------------- 66 (140)
T cd05212 7 FVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRD-GATVYSCDWKTIQLQ------------------- 66 (140)
T ss_pred ccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEeCCCCcCHH-------------------
Confidence 34555444444444443 347999999999999999988888874 888888875432222
Q ss_pred ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeC
Q 021628 210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIG 243 (310)
Q Consensus 210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~ 243 (310)
+..+.+|+|+.++|... ---+++++|..++.+|.
T Consensus 67 ~~v~~ADIVvsAtg~~~~i~~~~ikpGa~Vidvg~ 101 (140)
T cd05212 67 SKVHDADVVVVGSPKPEKVPTEWIKPGATVINCSP 101 (140)
T ss_pred HHHhhCCEEEEecCCCCccCHHHcCCCCEEEEcCC
Confidence 12356789999988542 22367888988887774
No 370
>PRK08303 short chain dehydrogenase; Provisional
Probab=93.44 E-value=0.4 Score=42.09 Aligned_cols=35 Identities=29% Similarity=0.327 Sum_probs=30.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS 185 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~ 185 (310)
.|.+++|+|+++++|.+.++.+... |++|+++.++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~-G~~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAA-GATVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEecc
Confidence 4789999999999999988877764 9999998886
No 371
>PRK07576 short chain dehydrogenase; Provisional
Probab=93.44 E-value=0.21 Score=42.74 Aligned_cols=42 Identities=33% Similarity=0.525 Sum_probs=35.2
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
++.+++|+|++|.+|...++.+... |++|+++++++++.+..
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~ 49 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARA-GANVAVASRSQEKVDAA 49 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 5789999999999999988877774 99999999887765433
No 372
>PRK14982 acyl-ACP reductase; Provisional
Probab=93.42 E-value=0.25 Score=43.83 Aligned_cols=91 Identities=16% Similarity=0.214 Sum_probs=57.5
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHH-HcCCCEEeeCCCCcccccCCCccEEEeCCCChH
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDLPEKFDVVFDAVGQCD 226 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~~ 226 (310)
-.+.+|+|+|++|.+|...+..+....+ .+++++.++++++..+. +++...+. ++.+...++|+|+.+++...
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~-----~l~~~l~~aDiVv~~ts~~~ 227 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL-----SLEEALPEADIVVWVASMPK 227 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH-----hHHHHHccCCEEEECCcCCc
Confidence 3678999999889999988777653235 47788888888877763 44321111 22233457899998887421
Q ss_pred H---HHhhcccCCEEEEEeCC
Q 021628 227 K---ALKAVKEGGRVVSIIGS 244 (310)
Q Consensus 227 ~---~~~~l~~~G~~v~~g~~ 244 (310)
. -...+.+.-.++..+.+
T Consensus 228 ~~~I~~~~l~~~~~viDiAvP 248 (340)
T PRK14982 228 GVEIDPETLKKPCLMIDGGYP 248 (340)
T ss_pred CCcCCHHHhCCCeEEEEecCC
Confidence 1 11345566666666654
No 373
>PRK06398 aldose dehydrogenase; Validated
Probab=93.37 E-value=0.26 Score=41.94 Aligned_cols=38 Identities=24% Similarity=0.409 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK 188 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~ 188 (310)
.|.+++|+|+++++|.+.+..+... |++|+++.+++++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~-G~~Vi~~~r~~~~ 42 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEE-GSNVINFDIKEPS 42 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCccc
Confidence 4689999999999999988877774 9999998887654
No 374
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=93.37 E-value=0.42 Score=42.36 Aligned_cols=88 Identities=22% Similarity=0.181 Sum_probs=57.9
Q ss_pred EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE------ee---CCCCcccccCCCccEEEeCCC
Q 021628 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA------ID---YTKENIEDLPEKFDVVFDAVG 223 (310)
Q Consensus 153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~------~~---~~~~~~~~~~~~~dvvi~~~g 223 (310)
+|.|+| +|.+|.+.+..+... |.+|++..+++++.+.+++.+.... +. ....+..+..+.+|+||-|..
T Consensus 6 ~I~iIG-~G~mG~~ia~~L~~~-G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v~ 83 (328)
T PRK14618 6 RVAVLG-AGAWGTALAVLAASK-GVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAVP 83 (328)
T ss_pred eEEEEC-cCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEECc
Confidence 689999 999998877776663 8899999999888777765421100 00 001122223357899999876
Q ss_pred C--hHHHHhhcccCCEEEEEe
Q 021628 224 Q--CDKALKAVKEGGRVVSII 242 (310)
Q Consensus 224 ~--~~~~~~~l~~~G~~v~~g 242 (310)
+ .+..++.++++-.++++.
T Consensus 84 ~~~~~~v~~~l~~~~~vi~~~ 104 (328)
T PRK14618 84 SKALRETLAGLPRALGYVSCA 104 (328)
T ss_pred hHHHHHHHHhcCcCCEEEEEe
Confidence 3 466777777776666553
No 375
>PRK07775 short chain dehydrogenase; Provisional
Probab=93.34 E-value=0.46 Score=40.84 Aligned_cols=41 Identities=20% Similarity=0.268 Sum_probs=33.2
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
..+++|+|++|.+|...+..+... |++|+++.++.++.+.+
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~-G~~V~~~~r~~~~~~~~ 50 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAA-GFPVALGARRVEKCEEL 50 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 458999999999999988877764 99999988877665443
No 376
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=93.34 E-value=0.21 Score=42.26 Aligned_cols=42 Identities=26% Similarity=0.391 Sum_probs=35.0
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|++|.+|...++.+... |++|+++.+++++.+.+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~-G~~V~~~~r~~~~~~~~ 50 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQA-GAEVILNGRDPAKLAAA 50 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 4789999999999999988877764 99999999987765443
No 377
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=93.31 E-value=0.25 Score=44.97 Aligned_cols=42 Identities=24% Similarity=0.342 Sum_probs=34.6
Q ss_pred cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh
Q 021628 146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK 188 (310)
Q Consensus 146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~ 188 (310)
.+...+.+|+|+|++|.+|...+..+... |.+|++++++.++
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~-G~~V~~l~R~~~~ 96 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRR-GYNVVAVAREKSG 96 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEEechhh
Confidence 34456779999999999999998887774 9999999987654
No 378
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.30 E-value=0.26 Score=42.06 Aligned_cols=34 Identities=26% Similarity=0.285 Sum_probs=26.5
Q ss_pred CCCEEEEEcC--CcchHHHHHHHHHhhcCCcEEEEec
Q 021628 150 AGKSILVLGG--AGGVGTMVIQLAKHVFGASKVAATS 184 (310)
Q Consensus 150 ~g~~vlI~g~--~g~~G~~a~~la~~~~g~~vi~~~~ 184 (310)
.+.+++|+|+ ++++|.+.+..+... |++|+++.+
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~-G~~v~~~~~ 40 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKRE-GAELAFTYV 40 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHC-CCeEEEEcc
Confidence 4789999995 579999977766654 999988753
No 379
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=93.30 E-value=0.77 Score=40.06 Aligned_cols=86 Identities=27% Similarity=0.336 Sum_probs=53.5
Q ss_pred EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCE---Eee---CCCCcccccCCCccEEEeCCC--C
Q 021628 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL---AID---YTKENIEDLPEKFDVVFDAVG--Q 224 (310)
Q Consensus 153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~---~~~---~~~~~~~~~~~~~dvvi~~~g--~ 224 (310)
+|.|+| +|.+|.+.+..+... |.+|+++++++++.+.+++.|... ... ....+.... ..+|+||-|+. .
T Consensus 2 ~I~IiG-~G~~G~~~a~~L~~~-g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila~k~~~ 78 (304)
T PRK06522 2 KIAILG-AGAIGGLFGAALAQA-GHDVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAEL-GPQDLVILAVKAYQ 78 (304)
T ss_pred EEEEEC-CCHHHHHHHHHHHhC-CCeEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhHc-CCCCEEEEeccccc
Confidence 588999 899998877766664 889999999888887776655421 000 001111122 57899998876 3
Q ss_pred hHHHHhh----cccCCEEEEE
Q 021628 225 CDKALKA----VKEGGRVVSI 241 (310)
Q Consensus 225 ~~~~~~~----l~~~G~~v~~ 241 (310)
...+++. +.++..++++
T Consensus 79 ~~~~~~~l~~~l~~~~~iv~~ 99 (304)
T PRK06522 79 LPAALPSLAPLLGPDTPVLFL 99 (304)
T ss_pred HHHHHHHHhhhcCCCCEEEEe
Confidence 3444443 3344556654
No 380
>PRK08703 short chain dehydrogenase; Provisional
Probab=93.28 E-value=0.24 Score=41.53 Aligned_cols=42 Identities=29% Similarity=0.453 Sum_probs=35.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|++|.+|...++.+... |.+|+++.+++++.+.+
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~-g~~V~~~~r~~~~~~~~ 46 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAA-GATVILVARHQKKLEKV 46 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHc-CCEEEEEeCChHHHHHH
Confidence 4679999999999999988877774 99999999988776544
No 381
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.26 E-value=0.6 Score=40.63 Aligned_cols=94 Identities=20% Similarity=0.212 Sum_probs=64.4
Q ss_pred cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEe-cChhhHHHHHHcCCCEEeeCCCCcc
Q 021628 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENI 208 (310)
Q Consensus 131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~-~~~~~~~~~~~~g~~~~~~~~~~~~ 208 (310)
..||+....+..++.... -.|.+|+|+|..+.+|.-.+..+... |+.|+++. ++.. +
T Consensus 137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~-g~tVtv~~~rT~~--------------------l 195 (296)
T PRK14188 137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAA-NATVTIAHSRTRD--------------------L 195 (296)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhC-CCEEEEECCCCCC--------------------H
Confidence 456665555555554443 57999999999999999888877774 89898884 4431 1
Q ss_pred cccCCCccEEEeCCCChHHHH-hhcccCCEEEEEeCCC
Q 021628 209 EDLPEKFDVVFDAVGQCDKAL-KAVKEGGRVVSIIGSV 245 (310)
Q Consensus 209 ~~~~~~~dvvi~~~g~~~~~~-~~l~~~G~~v~~g~~~ 245 (310)
.+..+.+|+|+.+.|.....- .++++|..++.+|...
T Consensus 196 ~e~~~~ADIVIsavg~~~~v~~~~lk~GavVIDvGin~ 233 (296)
T PRK14188 196 PAVCRRADILVAAVGRPEMVKGDWIKPGATVIDVGINR 233 (296)
T ss_pred HHHHhcCCEEEEecCChhhcchheecCCCEEEEcCCcc
Confidence 222346789999988542111 2388999999998644
No 382
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.24 E-value=0.68 Score=40.28 Aligned_cols=94 Identities=22% Similarity=0.221 Sum_probs=63.8
Q ss_pred cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (310)
Q Consensus 131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (310)
..||+.......++..+. -.|.+|.+.|..+.+|.-.+.++... |+.|++..+.... ..
T Consensus 138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~-gatVtv~~~~t~~-------------------l~ 197 (301)
T PRK14194 138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA-HCSVTVVHSRSTD-------------------AK 197 (301)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEECCCCCC-------------------HH
Confidence 456665555555554443 56999999996679999888888774 9999888654322 22
Q ss_pred ccCCCccEEEeCCCChHHH-HhhcccCCEEEEEeCC
Q 021628 210 DLPEKFDVVFDAVGQCDKA-LKAVKEGGRVVSIIGS 244 (310)
Q Consensus 210 ~~~~~~dvvi~~~g~~~~~-~~~l~~~G~~v~~g~~ 244 (310)
+..+.+|+||-++|..... -.++++|..++.+|..
T Consensus 198 e~~~~ADIVIsavg~~~~v~~~~ik~GaiVIDvgin 233 (301)
T PRK14194 198 ALCRQADIVVAAVGRPRLIDADWLKPGAVVIDVGIN 233 (301)
T ss_pred HHHhcCCEEEEecCChhcccHhhccCCcEEEEeccc
Confidence 2335678999998853111 1238889999888854
No 383
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=93.19 E-value=0.31 Score=42.69 Aligned_cols=73 Identities=21% Similarity=0.304 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHH---HHHHcC-CC---EEeeCC---CCcccccCCCccEEE
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD---LLRSLG-AD---LAIDYT---KENIEDLPEKFDVVF 219 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~---~~~~~g-~~---~~~~~~---~~~~~~~~~~~dvvi 219 (310)
.+.+|.|+|++|-+|...+..+... |+.|..++|+++..+ .++++. +. .++..+ ...+.....|+|.||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~r-GY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVf 83 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSR-GYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVF 83 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhC-CCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEE
Confidence 6789999999999999999988884 999999999887633 356654 11 122211 122333356899999
Q ss_pred eCCC
Q 021628 220 DAVG 223 (310)
Q Consensus 220 ~~~g 223 (310)
.++.
T Consensus 84 H~As 87 (327)
T KOG1502|consen 84 HTAS 87 (327)
T ss_pred EeCc
Confidence 8764
No 384
>PLN02427 UDP-apiose/xylose synthase
Probab=93.18 E-value=0.31 Score=44.26 Aligned_cols=78 Identities=13% Similarity=0.092 Sum_probs=48.4
Q ss_pred cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC-----C-EEeeCC--C-CcccccCCCcc
Q 021628 146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-----D-LAIDYT--K-ENIEDLPEKFD 216 (310)
Q Consensus 146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~-----~-~~~~~~--~-~~~~~~~~~~d 216 (310)
.+..+..+|+|+|++|-+|...++.+....+.+|++++++.++...+...+. . ..+..+ + +.+....+++|
T Consensus 9 ~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d 88 (386)
T PLN02427 9 GKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMAD 88 (386)
T ss_pred CCcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCC
Confidence 3444556899999999999988887665325889999887666554433221 1 112111 1 11222344799
Q ss_pred EEEeCCC
Q 021628 217 VVFDAVG 223 (310)
Q Consensus 217 vvi~~~g 223 (310)
+||++++
T Consensus 89 ~ViHlAa 95 (386)
T PLN02427 89 LTINLAA 95 (386)
T ss_pred EEEEccc
Confidence 9999875
No 385
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=93.16 E-value=0.98 Score=40.07 Aligned_cols=92 Identities=15% Similarity=0.157 Sum_probs=58.8
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHc----CCCEEeeCCCCcccccCCCccEEEeCC
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSL----GADLAIDYTKENIEDLPEKFDVVFDAV 222 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~----g~~~~~~~~~~~~~~~~~~~dvvi~~~ 222 (310)
+...+++|+| +|..+.+.+..+....+. ++.+..++.++.+.+ +++ +.. +... ++..+...++|+|+.|+
T Consensus 127 ~~~~~v~iiG-aG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~--~~~~~av~~aDiVvtaT 202 (326)
T TIGR02992 127 EDSSVVAIFG-AGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA--TDPRAAMSGADIIVTTT 202 (326)
T ss_pred CCCcEEEEEC-CCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe--CCHHHHhccCCEEEEec
Confidence 4557899999 899998877766533464 677888998886655 333 322 1111 12233346899999998
Q ss_pred CChHHH--HhhcccCCEEEEEeCC
Q 021628 223 GQCDKA--LKAVKEGGRVVSIIGS 244 (310)
Q Consensus 223 g~~~~~--~~~l~~~G~~v~~g~~ 244 (310)
++..-. .+.++++-.+..+|..
T Consensus 203 ~s~~p~i~~~~l~~g~~i~~vg~~ 226 (326)
T TIGR02992 203 PSETPILHAEWLEPGQHVTAMGSD 226 (326)
T ss_pred CCCCcEecHHHcCCCcEEEeeCCC
Confidence 753211 2457777777777743
No 386
>PRK07890 short chain dehydrogenase; Provisional
Probab=93.15 E-value=0.25 Score=41.84 Aligned_cols=42 Identities=31% Similarity=0.448 Sum_probs=35.2
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|+++.+|...+..+... |++|+++++++++.+.+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~ 45 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARA-GADVVLAARTAERLDEV 45 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 5689999999999999988877774 99999999988766554
No 387
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=93.11 E-value=1.1 Score=36.54 Aligned_cols=92 Identities=21% Similarity=0.197 Sum_probs=57.0
Q ss_pred cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC-EEeeCCCCcccccCCCccEEEe
Q 021628 146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAIDYTKENIEDLPEKFDVVFD 220 (310)
Q Consensus 146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~dvvi~ 220 (310)
....++.+||-.| .+.|..+..+++. |.+|++++.+++..+.+++ .+.. .....+.... .....+|+|+.
T Consensus 26 ~~~~~~~~vLDiG--cG~G~~a~~la~~--g~~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~I~~ 100 (195)
T TIGR00477 26 VKTVAPCKTLDLG--CGQGRNSLYLSLA--GYDVRAWDHNPASIASVLDMKARENLPLRTDAYDINAA-ALNEDYDFIFS 100 (195)
T ss_pred hccCCCCcEEEeC--CCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHhCCCceeEeccchhc-cccCCCCEEEE
Confidence 3444567888888 4568888888874 7899999999887766543 2322 1111111111 11346899986
Q ss_pred CCC----C-------hHHHHhhcccCCEEEEEe
Q 021628 221 AVG----Q-------CDKALKAVKEGGRVVSII 242 (310)
Q Consensus 221 ~~g----~-------~~~~~~~l~~~G~~v~~g 242 (310)
+.. + ++.+.+.|+|+|.++.+.
T Consensus 101 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~ 133 (195)
T TIGR00477 101 TVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVA 133 (195)
T ss_pred ecccccCCHHHHHHHHHHHHHHhCCCcEEEEEE
Confidence 521 1 257778899999965553
No 388
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=93.11 E-value=0.24 Score=42.59 Aligned_cols=43 Identities=35% Similarity=0.507 Sum_probs=36.1
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
-.|..++|+|++.++|.+.+..+... |++|+++.+++++++..
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~-Ga~v~i~~r~~~~~~~~ 48 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKA-GAKVVITGRSEERLEET 48 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 36788999999999998877766664 99999999999986655
No 389
>PRK06172 short chain dehydrogenase; Provisional
Probab=93.11 E-value=0.24 Score=41.81 Aligned_cols=42 Identities=33% Similarity=0.389 Sum_probs=34.5
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|++|.+|...+..+... |++|+++.+++++.+.+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~ 47 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFARE-GAKVVVADRDAAGGEET 47 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 4689999999999999988776664 89999999987765443
No 390
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=93.11 E-value=1 Score=35.30 Aligned_cols=85 Identities=14% Similarity=0.114 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC--hHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--CDK 227 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~--~~~ 227 (310)
.|.+|+|.| .|.+|.--++.+.. .|++|+++. ++..+.+.+++.-. +..... ......++|+||-++++ .+.
T Consensus 12 ~~~~vlVvG-GG~va~rka~~Ll~-~ga~V~VIs--p~~~~~l~~l~~i~-~~~~~~-~~~dl~~a~lViaaT~d~e~N~ 85 (157)
T PRK06719 12 HNKVVVIIG-GGKIAYRKASGLKD-TGAFVTVVS--PEICKEMKELPYIT-WKQKTF-SNDDIKDAHLIYAATNQHAVNM 85 (157)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHh-CCCEEEEEc--CccCHHHHhccCcE-EEeccc-ChhcCCCceEEEECCCCHHHHH
Confidence 578999999 89999876666655 389888874 44444444454211 111111 11124578999999885 344
Q ss_pred HHhhcccCCEEEE
Q 021628 228 ALKAVKEGGRVVS 240 (310)
Q Consensus 228 ~~~~l~~~G~~v~ 240 (310)
.+..++..+.++.
T Consensus 86 ~i~~~a~~~~~vn 98 (157)
T PRK06719 86 MVKQAAHDFQWVN 98 (157)
T ss_pred HHHHHHHHCCcEE
Confidence 4443333333443
No 391
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.10 E-value=0.71 Score=39.80 Aligned_cols=94 Identities=19% Similarity=0.213 Sum_probs=65.7
Q ss_pred cccchHHHHHHHHHhcc-cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628 131 SLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (310)
Q Consensus 131 ~~~~~~~ta~~al~~~~-~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (310)
..||.....+..++..+ .-.|.+|+|.|.+..+|.-..+++... ++.|+++-+.-.. +.
T Consensus 138 ~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~-~atVt~chs~T~~-------------------l~ 197 (284)
T PRK14177 138 YLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEM-NATVTLCHSKTQN-------------------LP 197 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEEEeCCCCCC-------------------HH
Confidence 45666544444455443 357999999999999999988888874 8888777543222 22
Q ss_pred ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCC
Q 021628 210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGS 244 (310)
Q Consensus 210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~ 244 (310)
+..+.+|+++.++|..+ -.-+++++|..++.+|..
T Consensus 198 ~~~~~ADIvIsAvGk~~~i~~~~ik~gavVIDvGin 233 (284)
T PRK14177 198 SIVRQADIIVGAVGKPEFIKADWISEGAVLLDAGYN 233 (284)
T ss_pred HHHhhCCEEEEeCCCcCccCHHHcCCCCEEEEecCc
Confidence 33457889999998532 234688899999999853
No 392
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=93.10 E-value=0.55 Score=39.74 Aligned_cols=35 Identities=23% Similarity=0.255 Sum_probs=29.5
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS 185 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~ 185 (310)
.|.+++|+|+++.+|.+.++.+... |++|+.+.++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~-G~~vv~~~~~ 43 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEA-GCDIVGINIV 43 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEecCc
Confidence 4689999999999999988877774 9999887654
No 393
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.09 E-value=0.73 Score=39.71 Aligned_cols=95 Identities=25% Similarity=0.266 Sum_probs=65.8
Q ss_pred cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (310)
Q Consensus 131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (310)
..||+....+..++..++ -.|.+|+|.|.+..+|.-..+++... ++.|+++-+.-. ++.
T Consensus 135 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~-~atVtichs~T~-------------------~l~ 194 (282)
T PRK14169 135 VVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNH-DATVTIAHSKTR-------------------NLK 194 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHC-CCEEEEECCCCC-------------------CHH
Confidence 456665555555554443 57999999999999999988888874 888876643222 222
Q ss_pred ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628 210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~ 245 (310)
+..+.+|+++.++|..+ -.-+++++|..++.+|...
T Consensus 195 ~~~~~ADIvI~AvG~p~~i~~~~vk~GavVIDvGin~ 231 (282)
T PRK14169 195 QLTKEADILVVAVGVPHFIGADAVKPGAVVIDVGISR 231 (282)
T ss_pred HHHhhCCEEEEccCCcCccCHHHcCCCcEEEEeeccc
Confidence 33457889999998532 2346788999999998644
No 394
>PRK07109 short chain dehydrogenase; Provisional
Probab=93.08 E-value=0.24 Score=44.12 Aligned_cols=73 Identities=18% Similarity=0.290 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH----HHcCCCEE-e--eCCCC-cccc-------cCCC
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLA-I--DYTKE-NIED-------LPEK 214 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~----~~~g~~~~-~--~~~~~-~~~~-------~~~~ 214 (310)
.+.+++|+|+++++|...++.+... |++|+++.+++++++.+ ++.|.... + |..+. +... ...+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~-G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~ 85 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARR-GAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP 85 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence 4679999999999999988877774 99999999988876554 23343322 2 22211 1111 1236
Q ss_pred ccEEEeCCC
Q 021628 215 FDVVFDAVG 223 (310)
Q Consensus 215 ~dvvi~~~g 223 (310)
+|++|+++|
T Consensus 86 iD~lInnAg 94 (334)
T PRK07109 86 IDTWVNNAM 94 (334)
T ss_pred CCEEEECCC
Confidence 899999886
No 395
>PRK07035 short chain dehydrogenase; Provisional
Probab=93.08 E-value=0.25 Score=41.72 Aligned_cols=42 Identities=24% Similarity=0.419 Sum_probs=35.2
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|+++.+|.+.++.+... |++|+++.++.++.+.+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~-G~~Vi~~~r~~~~~~~~ 48 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQ-GAHVIVSSRKLDGCQAV 48 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 4578999999999999988887775 99999999987766544
No 396
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=93.06 E-value=1 Score=33.01 Aligned_cols=85 Identities=19% Similarity=0.233 Sum_probs=57.3
Q ss_pred EEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc----ccCCCccEEEeCCCCh----
Q 021628 154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE----DLPEKFDVVFDAVGQC---- 225 (310)
Q Consensus 154 vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~dvvi~~~g~~---- 225 (310)
|+|.| .|.+|...++.++. .+.++++++.++++.+.+++.|.. ++..+..+.. .....++.++-+.++.
T Consensus 1 vvI~G-~g~~~~~i~~~L~~-~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~ 77 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKE-GGIDVVVIDRDPERVEELREEGVE-VIYGDATDPEVLERAGIEKADAVVILTDDDEENL 77 (116)
T ss_dssp EEEES--SHHHHHHHHHHHH-TTSEEEEEESSHHHHHHHHHTTSE-EEES-TTSHHHHHHTTGGCESEEEEESSSHHHHH
T ss_pred eEEEc-CCHHHHHHHHHHHh-CCCEEEEEECCcHHHHHHHhcccc-cccccchhhhHHhhcCccccCEEEEccCCHHHHH
Confidence 67889 89999999998888 477899999999999999888854 3333322211 1134788888777642
Q ss_pred --HHHHhhcccCCEEEEE
Q 021628 226 --DKALKAVKEGGRVVSI 241 (310)
Q Consensus 226 --~~~~~~l~~~G~~v~~ 241 (310)
-..++.+.+..+++..
T Consensus 78 ~~~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 78 LIALLARELNPDIRIIAR 95 (116)
T ss_dssp HHHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHHHCCCCeEEEE
Confidence 2344555566666654
No 397
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=93.04 E-value=0.4 Score=39.98 Aligned_cols=89 Identities=28% Similarity=0.396 Sum_probs=61.0
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCE--EeeCCC---CcccccCCCccEEEeCC-
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL--AIDYTK---ENIEDLPEKFDVVFDAV- 222 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~--~~~~~~---~~~~~~~~~~dvvi~~~- 222 (310)
-+|.+||=.| +|+ |+++..+|+. |++|+.++.+++-.+.++...... -+++.. +++....+.||+|++.-
T Consensus 58 l~g~~vLDvG-CGg-G~Lse~mAr~--Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~~~edl~~~~~~FDvV~cmEV 133 (243)
T COG2227 58 LPGLRVLDVG-CGG-GILSEPLARL--GASVTGIDASEKPIEVAKLHALESGVNIDYRQATVEDLASAGGQFDVVTCMEV 133 (243)
T ss_pred CCCCeEEEec-CCc-cHhhHHHHHC--CCeeEEecCChHHHHHHHHhhhhccccccchhhhHHHHHhcCCCccEEEEhhH
Confidence 4788888888 443 6888888886 899999999999988886422111 123332 22333346899998652
Q ss_pred ----CC----hHHHHhhcccCCEEEEE
Q 021628 223 ----GQ----CDKALKAVKEGGRVVSI 241 (310)
Q Consensus 223 ----g~----~~~~~~~l~~~G~~v~~ 241 (310)
.+ +..+.++++|+|.++.-
T Consensus 134 lEHv~dp~~~~~~c~~lvkP~G~lf~S 160 (243)
T COG2227 134 LEHVPDPESFLRACAKLVKPGGILFLS 160 (243)
T ss_pred HHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence 22 25788999999998644
No 398
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=93.04 E-value=0.61 Score=41.47 Aligned_cols=94 Identities=26% Similarity=0.295 Sum_probs=65.1
Q ss_pred ccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc
Q 021628 132 LPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED 210 (310)
Q Consensus 132 ~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 210 (310)
.||........++..++ -.|++|+|.|.+..+|.-...++... ++.|+++-..- .++.+
T Consensus 211 ~PCTp~avielL~~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~-~ATVTicHs~T-------------------~nl~~ 270 (364)
T PLN02616 211 VPCTPKGCIELLHRYNVEIKGKRAVVIGRSNIVGMPAALLLQRE-DATVSIVHSRT-------------------KNPEE 270 (364)
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHC-CCeEEEeCCCC-------------------CCHHH
Confidence 46555444444444433 47999999999999999988888874 88787764322 22233
Q ss_pred cCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628 211 LPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 211 ~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~ 245 (310)
..+.+|+||.++|..+ ---+++++|..++.+|...
T Consensus 271 ~~r~ADIVIsAvGkp~~i~~d~vK~GAvVIDVGIn~ 306 (364)
T PLN02616 271 ITREADIIISAVGQPNMVRGSWIKPGAVVIDVGINP 306 (364)
T ss_pred HHhhCCEEEEcCCCcCcCCHHHcCCCCEEEeccccc
Confidence 3467899999999542 2346788999999998644
No 399
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=93.03 E-value=0.2 Score=42.55 Aligned_cols=64 Identities=22% Similarity=0.265 Sum_probs=44.9
Q ss_pred EEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCC-CccEEEeCCC
Q 021628 154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPE-KFDVVFDAVG 223 (310)
Q Consensus 154 vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~dvvi~~~g 223 (310)
|+|+|++|-+|.+.+..++.. |-+|++++|++.+.+.-...... ..+..+.... ++|+|||.+|
T Consensus 1 IliTGgTGlIG~~L~~~L~~~-gh~v~iltR~~~~~~~~~~~~v~-----~~~~~~~~~~~~~DavINLAG 65 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKG-GHQVTILTRRPPKASQNLHPNVT-----LWEGLADALTLGIDAVINLAG 65 (297)
T ss_pred CeEeccccchhHHHHHHHHhC-CCeEEEEEcCCcchhhhcCcccc-----ccchhhhcccCCCCEEEECCC
Confidence 589999999999999988874 88999999988776543221111 1111222223 7999999998
No 400
>PRK08219 short chain dehydrogenase; Provisional
Probab=93.02 E-value=0.41 Score=39.56 Aligned_cols=70 Identities=17% Similarity=0.290 Sum_probs=45.6
Q ss_pred CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-cCCCEEeeCCCCccccc------CCCccEEEeCCC
Q 021628 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIEDL------PEKFDVVFDAVG 223 (310)
Q Consensus 152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~------~~~~dvvi~~~g 223 (310)
.+++|+|++|.+|...+..+.. . .+|++++++.++.+.+.+ .....++..+-.+.... ..+.|.+|.++|
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~-~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag 80 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAP-T-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAG 80 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHh-h-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 5799999999999998887766 4 789999998877665543 21112222221111111 126899999876
No 401
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.01 E-value=0.71 Score=39.86 Aligned_cols=95 Identities=27% Similarity=0.315 Sum_probs=66.0
Q ss_pred cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (310)
Q Consensus 131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (310)
..||+.......++..++ -.|.+|+|.|.+..+|.-...++... ++.|+++...... +.
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~-~atVt~chs~t~~-------------------l~ 196 (284)
T PRK14190 137 FLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNE-NATVTYCHSKTKN-------------------LA 196 (284)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEEeCCchh-------------------HH
Confidence 456665555555555443 57999999999999999988888874 8888877543221 22
Q ss_pred ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628 210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~ 245 (310)
+..+.+|+|+.++|... -.-+++++|..++.+|...
T Consensus 197 ~~~~~ADIvI~AvG~p~~i~~~~ik~gavVIDvGi~~ 233 (284)
T PRK14190 197 ELTKQADILIVAVGKPKLITADMVKEGAVVIDVGVNR 233 (284)
T ss_pred HHHHhCCEEEEecCCCCcCCHHHcCCCCEEEEeeccc
Confidence 22456889999998532 2235678999999998654
No 402
>PRK06194 hypothetical protein; Provisional
Probab=92.96 E-value=0.25 Score=42.67 Aligned_cols=42 Identities=29% Similarity=0.415 Sum_probs=34.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.++||+|++|.+|...+..+... |++|++++++.++++..
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~ 46 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAAL-GMKLVLADVQQDALDRA 46 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHC-CCEEEEEeCChHHHHHH
Confidence 3578999999999999988877764 99999999887665444
No 403
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=92.95 E-value=0.28 Score=41.28 Aligned_cols=45 Identities=22% Similarity=0.332 Sum_probs=36.7
Q ss_pred ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
+..++.+++|+|++|.+|...++.+... |++|++++++.++.+.+
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~-G~~Vi~~~r~~~~~~~~ 52 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARH-GATVILLGRTEEKLEAV 52 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHC-CCcEEEEeCCHHHHHHH
Confidence 3457889999999999999988877764 99999999987765443
No 404
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=92.94 E-value=1.3 Score=36.32 Aligned_cols=89 Identities=16% Similarity=0.146 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh-hHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC--hH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--CD 226 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~--~~ 226 (310)
.|.+|+|.| .|.+|...+..+... |++|+++..... ++..+.+-+. ......... .....++|+||-|+++ .+
T Consensus 9 ~~k~vLVIG-gG~va~~ka~~Ll~~-ga~V~VIs~~~~~~l~~l~~~~~-i~~~~~~~~-~~~l~~adlViaaT~d~elN 84 (202)
T PRK06718 9 SNKRVVIVG-GGKVAGRRAITLLKY-GAHIVVISPELTENLVKLVEEGK-IRWKQKEFE-PSDIVDAFLVIAATNDPRVN 84 (202)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEcCCCCHHHHHHHhCCC-EEEEecCCC-hhhcCCceEEEEcCCCHHHH
Confidence 578999999 899998877766664 888888865422 2222222221 111111111 1223578999999885 34
Q ss_pred HHHhhcccCCEEEEEe
Q 021628 227 KALKAVKEGGRVVSII 242 (310)
Q Consensus 227 ~~~~~l~~~G~~v~~g 242 (310)
..+...+..+.++...
T Consensus 85 ~~i~~~a~~~~lvn~~ 100 (202)
T PRK06718 85 EQVKEDLPENALFNVI 100 (202)
T ss_pred HHHHHHHHhCCcEEEC
Confidence 4444333445565553
No 405
>PRK06197 short chain dehydrogenase; Provisional
Probab=92.93 E-value=0.24 Score=43.31 Aligned_cols=41 Identities=24% Similarity=0.261 Sum_probs=34.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL 191 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~ 191 (310)
.+.+|+|+|++|++|...+..+... |++|+++.++.++.+.
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~-G~~vi~~~r~~~~~~~ 55 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAK-GAHVVLAVRNLDKGKA 55 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHH
Confidence 5789999999999999988876664 8999999998776543
No 406
>TIGR00537 hemK_rel_arch HemK-related putative methylase. The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.
Probab=92.93 E-value=2.1 Score=34.20 Aligned_cols=69 Identities=19% Similarity=0.230 Sum_probs=41.5
Q ss_pred ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC-EEeeCCCCcccccCCCccEEEeC
Q 021628 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAIDYTKENIEDLPEKFDVVFDA 221 (310)
Q Consensus 147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~dvvi~~ 221 (310)
...++++|+-+| .+.|..+..+++. +.+++.++.+++..+.+++ .+.. .++..+... ...+.+|+|+..
T Consensus 16 ~~~~~~~vLdlG--~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~--~~~~~fD~Vi~n 89 (179)
T TIGR00537 16 RELKPDDVLEIG--AGTGLVAIRLKGK--GKCILTTDINPFAVKELRENAKLNNVGLDVVMTDLFK--GVRGKFDVILFN 89 (179)
T ss_pred HhcCCCeEEEeC--CChhHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCceEEEEccccc--ccCCcccEEEEC
Confidence 345567888887 4556677777775 4488999999998777643 2322 122222111 123468888754
No 407
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=92.93 E-value=0.29 Score=47.91 Aligned_cols=77 Identities=16% Similarity=0.065 Sum_probs=48.1
Q ss_pred ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCc----ccccCCCccEEEeCC
Q 021628 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN----IEDLPEKFDVVFDAV 222 (310)
Q Consensus 147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~dvvi~~~ 222 (310)
..+++.+|+|+|++|-+|...++.+....|.+|+++++.............-.++..+-.+ ......++|+||.++
T Consensus 311 ~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlA 390 (660)
T PRK08125 311 SAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLV 390 (660)
T ss_pred hhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECc
Confidence 4567889999999999999988876653368999999866543322111111122222111 122235899999876
Q ss_pred C
Q 021628 223 G 223 (310)
Q Consensus 223 g 223 (310)
+
T Consensus 391 a 391 (660)
T PRK08125 391 A 391 (660)
T ss_pred c
Confidence 5
No 408
>PRK05876 short chain dehydrogenase; Provisional
Probab=92.89 E-value=0.27 Score=42.38 Aligned_cols=42 Identities=24% Similarity=0.328 Sum_probs=34.9
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|+++++|.+.+..+... |++|+++++++++++.+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~-G~~Vv~~~r~~~~l~~~ 46 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARR-GARVVLGDVDKPGLRQA 46 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 4789999999999999988877764 99999999887766544
No 409
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.88 E-value=1.4 Score=36.96 Aligned_cols=33 Identities=21% Similarity=0.352 Sum_probs=27.2
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS 184 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~ 184 (310)
+.+++|+|++|.+|...+.-+... |+++++..+
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~-g~~v~~~~~ 38 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKE-GSLVVVNAK 38 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeC
Confidence 579999999999999877766664 898877665
No 410
>PRK07791 short chain dehydrogenase; Provisional
Probab=92.88 E-value=0.74 Score=39.87 Aligned_cols=37 Identities=24% Similarity=0.374 Sum_probs=30.3
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST 186 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~ 186 (310)
-.+.+++|+|+++++|.+.+..+... |++|++++++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~-G~~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAE-GARVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEeeCCc
Confidence 35789999999999999977766664 99998887654
No 411
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=92.85 E-value=0.38 Score=41.65 Aligned_cols=51 Identities=25% Similarity=0.294 Sum_probs=43.7
Q ss_pred hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcC
Q 021628 145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLG 196 (310)
Q Consensus 145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g 196 (310)
..+.+|.-.|+|.|++.++|++.+..++.. |++|.++.++.+++..+. .++
T Consensus 27 ~~~~k~~~hi~itggS~glgl~la~e~~~~-ga~Vti~ar~~~kl~~a~~~l~ 78 (331)
T KOG1210|consen 27 IVKPKPRRHILITGGSSGLGLALALECKRE-GADVTITARSGKKLLEAKAELE 78 (331)
T ss_pred hcccCccceEEEecCcchhhHHHHHHHHHc-cCceEEEeccHHHHHHHHhhhh
Confidence 356677789999999999999999999985 999999999999998884 444
No 412
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=92.85 E-value=0.98 Score=39.95 Aligned_cols=92 Identities=18% Similarity=0.238 Sum_probs=55.8
Q ss_pred EEEEEcCCcchHHHHHHHHHhhc---CCcEEEEec--ChhhHHHHHHcCCC--------------EEeeCC------C--
Q 021628 153 SILVLGGAGGVGTMVIQLAKHVF---GASKVAATS--STAKLDLLRSLGAD--------------LAIDYT------K-- 205 (310)
Q Consensus 153 ~vlI~g~~g~~G~~a~~la~~~~---g~~vi~~~~--~~~~~~~~~~~g~~--------------~~~~~~------~-- 205 (310)
+|.|.| .|.+|...++.+.... ..+++.+.. +.+-+.++-++.-. .+++.. .
T Consensus 1 ~IaInG-fGrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAING-FGRIGRNVLRALYESGERLGIEVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEEC-CCHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 478999 5999999999877631 256666543 33334444332210 011100 0
Q ss_pred -CcccccCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC
Q 021628 206 -ENIEDLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 206 -~~~~~~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~ 245 (310)
+.......++|+||+|+|. .+.+.+++..|++.+.++.+.
T Consensus 80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP~ 123 (325)
T TIGR01532 80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHPG 123 (325)
T ss_pred hhhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCCC
Confidence 1111123489999999994 477788888888999887653
No 413
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=92.83 E-value=0.13 Score=45.25 Aligned_cols=70 Identities=20% Similarity=0.297 Sum_probs=46.2
Q ss_pred EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCC-CcccccCCCccEEEeCCC
Q 021628 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVG 223 (310)
Q Consensus 153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~dvvi~~~g 223 (310)
+|+|+|++|.+|...++.+... |.+|+++++++++...+.+.+...+ .+..+ +.......++|+||++++
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~ 73 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQ-GEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAA 73 (328)
T ss_pred eEEEECCccchhHHHHHHHHHC-CCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEece
Confidence 6899999999999988887774 8999999997766543333333222 12222 112223347899998864
No 414
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.82 E-value=0.71 Score=39.81 Aligned_cols=96 Identities=22% Similarity=0.264 Sum_probs=64.4
Q ss_pred cccchHHHHHHHHHhcccC-CCCEEEEEcCCcchHHHHHHHHHhh-cCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcc
Q 021628 131 SLPLATETAYEGLERSAFS-AGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLRSLGADLAIDYTKENI 208 (310)
Q Consensus 131 ~~~~~~~ta~~al~~~~~~-~g~~vlI~g~~g~~G~~a~~la~~~-~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 208 (310)
..||+....+..++..+.. .|.+++|.|.+..+|.-...++... .++.|+++-+.. .++
T Consensus 137 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T-------------------~~l 197 (284)
T PRK14193 137 PLPCTPRGIVHLLRRYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGT-------------------RDL 197 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCC-------------------CCH
Confidence 3566655555555555543 6999999999999998877777651 267666554321 222
Q ss_pred cccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628 209 EDLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 209 ~~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~ 245 (310)
.+..+.+|+++.++|..+ -.-+++++|..++.+|...
T Consensus 198 ~~~~k~ADIvV~AvGkp~~i~~~~ik~GavVIDvGin~ 235 (284)
T PRK14193 198 AAHTRRADIIVAAAGVAHLVTADMVKPGAAVLDVGVSR 235 (284)
T ss_pred HHHHHhCCEEEEecCCcCccCHHHcCCCCEEEEccccc
Confidence 333457899999999542 2346788999999998654
No 415
>PRK06101 short chain dehydrogenase; Provisional
Probab=92.80 E-value=0.26 Score=41.44 Aligned_cols=43 Identities=21% Similarity=0.330 Sum_probs=35.0
Q ss_pred CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc
Q 021628 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL 195 (310)
Q Consensus 152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~ 195 (310)
.+++|+|++|++|...+..+... |++|+++++++++++.+.+.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~ 44 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQ-GWQVIACGRNQSVLDELHTQ 44 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHh
Confidence 47899999999999877666664 99999999998887766543
No 416
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=92.80 E-value=0.29 Score=41.47 Aligned_cols=42 Identities=24% Similarity=0.355 Sum_probs=34.7
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|++|.+|...+..+... |.+|+++.+++++.+.+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~ 47 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARA-GAAVAIADLNQDGANAV 47 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHH
Confidence 4789999999999999988877774 99999999988665443
No 417
>PRK12743 oxidoreductase; Provisional
Probab=92.78 E-value=0.66 Score=39.31 Aligned_cols=39 Identities=13% Similarity=0.136 Sum_probs=30.8
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHH
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLD 190 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~ 190 (310)
+++++|+|+++.+|...++.+... |++|+++.+ +.++.+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~-G~~V~~~~~~~~~~~~ 41 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQ-GFDIGITWHSDEEGAK 41 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCChHHHH
Confidence 468999999999999988887774 999988765 444443
No 418
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=92.77 E-value=0.77 Score=39.11 Aligned_cols=89 Identities=19% Similarity=0.299 Sum_probs=59.6
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC---EEeeCCCCccc-ccCCCccEEEe
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIE-DLPEKFDVVFD 220 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~-~~~~~~dvvi~ 220 (310)
.++.+||=.| .+.|..+..+++. +.+|+.++.+++.++.+++ .|.. .++..+..+.. ...+.+|+|+.
T Consensus 43 ~~~~~vLDiG--cG~G~~a~~la~~--g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d~~~l~~~~~~~fD~V~~ 118 (255)
T PRK11036 43 PRPLRVLDAG--GGEGQTAIKLAEL--GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAAQDIAQHLETPVDLILF 118 (255)
T ss_pred CCCCEEEEeC--CCchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEcCHHHHhhhcCCCCCEEEe
Confidence 4567888887 5567888888875 7899999999998877754 2321 12222222221 12357999985
Q ss_pred CCC-----C----hHHHHhhcccCCEEEEE
Q 021628 221 AVG-----Q----CDKALKAVKEGGRVVSI 241 (310)
Q Consensus 221 ~~g-----~----~~~~~~~l~~~G~~v~~ 241 (310)
... . +..+.+.|+|+|+++.+
T Consensus 119 ~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (255)
T PRK11036 119 HAVLEWVADPKSVLQTLWSVLRPGGALSLM 148 (255)
T ss_pred hhHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence 532 2 36788999999999765
No 419
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=92.75 E-value=0.94 Score=39.38 Aligned_cols=95 Identities=27% Similarity=0.282 Sum_probs=65.9
Q ss_pred cccchHHHHHHHHHhcc-cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628 131 SLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (310)
Q Consensus 131 ~~~~~~~ta~~al~~~~-~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (310)
..||+....+..++..+ .-.|.+|+|.|-+..+|.=...++... ++.|+++-..-. +..
T Consensus 146 ~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~-~ATVtvchs~T~-------------------nl~ 205 (299)
T PLN02516 146 FLPCTPKGCLELLSRSGIPIKGKKAVVVGRSNIVGLPVSLLLLKA-DATVTVVHSRTP-------------------DPE 205 (299)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHC-CCEEEEeCCCCC-------------------CHH
Confidence 45666555555555443 345999999999999999888888874 888887744321 122
Q ss_pred ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628 210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~ 245 (310)
+..+.+|+++.++|... -.-+++++|..++.+|...
T Consensus 206 ~~~~~ADIvv~AvGk~~~i~~~~vk~gavVIDvGin~ 242 (299)
T PLN02516 206 SIVREADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNA 242 (299)
T ss_pred HHHhhCCEEEEcCCCcCccCHHHcCCCCEEEEeeccc
Confidence 23457889999998532 2346788999999998544
No 420
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=92.75 E-value=0.41 Score=42.83 Aligned_cols=74 Identities=22% Similarity=0.240 Sum_probs=47.0
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHc--CCC-EEeeCCCCc---ccccCCCccEEEeC
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSL--GAD-LAIDYTKEN---IEDLPEKFDVVFDA 221 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~--g~~-~~~~~~~~~---~~~~~~~~dvvi~~ 221 (310)
..+.+|||+|++|.+|...++.+... |.+|++++++.++...+ ..+ +.. .++..+-.+ +.....++|.||.+
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQR-GYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHV 86 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence 35678999999999999988887774 99999988876654433 222 111 122221111 22223468899887
Q ss_pred CC
Q 021628 222 VG 223 (310)
Q Consensus 222 ~g 223 (310)
++
T Consensus 87 A~ 88 (353)
T PLN02896 87 AA 88 (353)
T ss_pred Cc
Confidence 65
No 421
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=92.75 E-value=0.89 Score=39.30 Aligned_cols=103 Identities=19% Similarity=0.263 Sum_probs=70.0
Q ss_pred EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh-HHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCCh------
Q 021628 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC------ 225 (310)
Q Consensus 153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~------ 225 (310)
+|..+| -|.+|.-.++=+... |..+.+.++++++ .+.+++.|+...- +..+....+|+||-|.++.
T Consensus 2 kIafIG-LG~MG~pmA~~L~~a-G~~v~v~~r~~~ka~~~~~~~Ga~~a~-----s~~eaa~~aDvVitmv~~~~~V~~V 74 (286)
T COG2084 2 KIAFIG-LGIMGSPMAANLLKA-GHEVTVYNRTPEKAAELLAAAGATVAA-----SPAEAAAEADVVITMLPDDAAVRAV 74 (286)
T ss_pred eEEEEc-CchhhHHHHHHHHHC-CCEEEEEeCChhhhhHHHHHcCCcccC-----CHHHHHHhCCEEEEecCCHHHHHHH
Confidence 577888 889987655544443 8999999999998 8888888865332 1233456889999998742
Q ss_pred ----HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628 226 ----DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK 274 (310)
Q Consensus 226 ----~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (310)
.-.++.++++..++.++ +..++.-+++-+.++++.+.
T Consensus 75 ~~g~~g~~~~~~~G~i~IDmS------------Tisp~~a~~~a~~~~~~G~~ 115 (286)
T COG2084 75 LFGENGLLEGLKPGAIVIDMS------------TISPETARELAAALAAKGLE 115 (286)
T ss_pred HhCccchhhcCCCCCEEEECC------------CCCHHHHHHHHHHHHhcCCc
Confidence 23445666777777775 24455666666666665544
No 422
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.74 E-value=0.81 Score=39.44 Aligned_cols=95 Identities=21% Similarity=0.224 Sum_probs=66.3
Q ss_pred cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (310)
Q Consensus 131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (310)
..||+....+..++..+. -.|.+|+|.|.+..+|.-...++... ++.|+++-+.-.. +.
T Consensus 136 ~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~-~atVt~chs~T~n-------------------l~ 195 (282)
T PRK14166 136 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-GATVSVCHIKTKD-------------------LS 195 (282)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEEEeCCCCCC-------------------HH
Confidence 457665555555555443 47999999999999999988888874 8888766543222 22
Q ss_pred ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628 210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~ 245 (310)
+..+.+|+++.++|..+ -.-+++++|..++.+|...
T Consensus 196 ~~~~~ADIvIsAvGkp~~i~~~~vk~GavVIDvGin~ 232 (282)
T PRK14166 196 LYTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGINR 232 (282)
T ss_pred HHHhhCCEEEEcCCCcCccCHHHcCCCCEEEEecccc
Confidence 23457899999999542 2335788999999998543
No 423
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=92.72 E-value=0.8 Score=39.85 Aligned_cols=72 Identities=17% Similarity=0.250 Sum_probs=42.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChh---hHHHH-HHcCCC-----EEeeCCCC-cccccCCCccEE
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTA---KLDLL-RSLGAD-----LAIDYTKE-NIEDLPEKFDVV 218 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~---~~~~~-~~~g~~-----~~~~~~~~-~~~~~~~~~dvv 218 (310)
.+.+++|+| +|+.+.+.+..+..+ |+ +++++.|+++ |.+.+ ++++.. .+....+. .+.+....+|+|
T Consensus 123 ~~k~vlvlG-aGGaarAi~~~l~~~-g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDiv 200 (288)
T PRK12749 123 KGKTMVLLG-AGGASTAIGAQGAIE-GLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL 200 (288)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEE
Confidence 567999999 788888766655554 65 7778888753 54444 344321 11111110 011223478999
Q ss_pred EeCCC
Q 021628 219 FDAVG 223 (310)
Q Consensus 219 i~~~g 223 (310)
|+|++
T Consensus 201 INaTp 205 (288)
T PRK12749 201 TNGTK 205 (288)
T ss_pred EECCC
Confidence 99975
No 424
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.72 E-value=0.58 Score=39.81 Aligned_cols=35 Identities=23% Similarity=0.297 Sum_probs=28.1
Q ss_pred CCCEEEEEcCC--cchHHHHHHHHHhhcCCcEEEEecC
Q 021628 150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSS 185 (310)
Q Consensus 150 ~g~~vlI~g~~--g~~G~~a~~la~~~~g~~vi~~~~~ 185 (310)
.|++++|+|++ +++|.+.+..+... |++|+++.++
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~-G~~v~~~~r~ 42 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNA-GAKLVFTYAG 42 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHC-CCEEEEecCc
Confidence 47899999976 79999977766664 9999988654
No 425
>PRK07024 short chain dehydrogenase; Provisional
Probab=92.70 E-value=0.3 Score=41.46 Aligned_cols=41 Identities=17% Similarity=0.289 Sum_probs=34.7
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
+.+|+|+|++|.+|...+..+... |++|+++++++++++.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~-G~~v~~~~r~~~~~~~~ 42 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQ-GATLGLVARRTDALQAF 42 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 468999999999999988877764 99999999988877655
No 426
>PRK06125 short chain dehydrogenase; Provisional
Probab=92.70 E-value=0.31 Score=41.39 Aligned_cols=42 Identities=24% Similarity=0.403 Sum_probs=35.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|+++++|...++.+... |++|+++.+++++.+.+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~ 47 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAE-GCHLHLVARDADALEAL 47 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 4789999999999999988877774 99999999988776554
No 427
>PRK07904 short chain dehydrogenase; Provisional
Probab=92.67 E-value=0.32 Score=41.34 Aligned_cols=41 Identities=22% Similarity=0.256 Sum_probs=32.4
Q ss_pred cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh
Q 021628 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK 188 (310)
Q Consensus 148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~ 188 (310)
+..+.+|+|+|+++++|.+.++-+...+|++|+++++++++
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~ 45 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDP 45 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcch
Confidence 34577999999999999998875444335899999998765
No 428
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=92.66 E-value=0.57 Score=41.53 Aligned_cols=92 Identities=12% Similarity=0.138 Sum_probs=60.0
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHH-H---HcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLL-R---SLGADLAIDYTKENIEDLPEKFDVVFDAVG 223 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~-~---~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g 223 (310)
+...++.|+| +|..|.+.+..+..... .++.+.++++++.+.+ + +++..... ..+..+..+++|+|+-|++
T Consensus 126 ~~~~~lgiiG-~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~---~~~~~eav~~aDiVitaT~ 201 (325)
T TIGR02371 126 KDSSVLGIIG-AGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRA---ATDPREAVEGCDILVTTTP 201 (325)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEE---eCCHHHHhccCCEEEEecC
Confidence 4567899999 99999886665444334 4677888998887655 3 33432111 1123344568999999886
Q ss_pred ChH--HHHhhcccCCEEEEEeCC
Q 021628 224 QCD--KALKAVKEGGRVVSIIGS 244 (310)
Q Consensus 224 ~~~--~~~~~l~~~G~~v~~g~~ 244 (310)
+.+ --.++++++-.+..+|.+
T Consensus 202 s~~P~~~~~~l~~g~~v~~vGs~ 224 (325)
T TIGR02371 202 SRKPVVKADWVSEGTHINAIGAD 224 (325)
T ss_pred CCCcEecHHHcCCCCEEEecCCC
Confidence 421 224577898888888854
No 429
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=92.65 E-value=0.62 Score=32.86 Aligned_cols=83 Identities=28% Similarity=0.365 Sum_probs=52.7
Q ss_pred EEEEEcCCcchHHHHHHHHHhhcC---CcEEEE-ecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEEeCCC--Ch
Q 021628 153 SILVLGGAGGVGTMVIQLAKHVFG---ASKVAA-TSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVG--QC 225 (310)
Q Consensus 153 ~vlI~g~~g~~G~~a~~la~~~~g---~~vi~~-~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g--~~ 225 (310)
+|.++| +|.+|.+.+.-.... | .+++++ .+++++.+.+ ++++...+.. +..+..+..|+||-|+. ..
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~-g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~advvilav~p~~~ 74 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLAS-GIKPHEVIIVSSRSPEKAAELAKEYGVQATAD----DNEEAAQEADVVILAVKPQQL 74 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHT-TS-GGEEEEEEESSHHHHHHHHHHCTTEEESE----EHHHHHHHTSEEEE-S-GGGH
T ss_pred CEEEEC-CCHHHHHHHHHHHHC-CCCceeEEeeccCcHHHHHHHHHhhccccccC----ChHHhhccCCEEEEEECHHHH
Confidence 477888 999999887776664 7 788855 8999998887 5566433321 11222346899999986 23
Q ss_pred HHHH---hhcccCCEEEEE
Q 021628 226 DKAL---KAVKEGGRVVSI 241 (310)
Q Consensus 226 ~~~~---~~l~~~G~~v~~ 241 (310)
...+ ....++..++++
T Consensus 75 ~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 75 PEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp HHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHhhccCCCEEEEe
Confidence 3333 445566666655
No 430
>PLN02686 cinnamoyl-CoA reductase
Probab=92.64 E-value=0.39 Score=43.36 Aligned_cols=45 Identities=20% Similarity=0.264 Sum_probs=35.9
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS 194 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~ 194 (310)
..+.+|+|+|++|.+|...+..+... |.+|++++++.++.+.+++
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~-G~~V~~~~r~~~~~~~l~~ 95 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRH-GYSVRIAVDTQEDKEKLRE 95 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH
Confidence 45789999999999999998877774 9999988887665544433
No 431
>PRK08628 short chain dehydrogenase; Provisional
Probab=92.64 E-value=0.28 Score=41.59 Aligned_cols=43 Identities=26% Similarity=0.355 Sum_probs=34.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR 193 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~ 193 (310)
.+.+++|+|++|.+|...+..+... |++++++++++++.+..+
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~-G~~v~~~~r~~~~~~~~~ 48 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEE-GAIPVIFGRSAPDDEFAE 48 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHc-CCcEEEEcCChhhHHHHH
Confidence 4679999999999999977766664 999999998877664443
No 432
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.62 E-value=0.43 Score=39.97 Aligned_cols=41 Identities=32% Similarity=0.490 Sum_probs=32.9
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEE-ecChhhHHHH
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLL 192 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~-~~~~~~~~~~ 192 (310)
+.+++|+|++|.+|...+..+... |++++++ .+++++.+.+
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~-g~~v~~~~~r~~~~~~~~ 46 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKE-GAKVVIAYDINEEAAQEL 46 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHH
Confidence 568999999999999888766664 9999888 8877665443
No 433
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=92.62 E-value=0.51 Score=45.80 Aligned_cols=90 Identities=17% Similarity=0.243 Sum_probs=63.6
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEe-eCCCCccc--ccCCCccEEEeCCCCh--
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTKENIE--DLPEKFDVVFDAVGQC-- 225 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~--~~~~~~dvvi~~~g~~-- 225 (310)
.++|+|.| .|.+|+..++.++.. |.++++++.++++.+.+++.|...+. |..+.+.- ...+.+|.++-+.++.
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~-g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~d~~~ 477 (621)
T PRK03562 400 QPRVIIAG-FGRFGQIVGRLLLSS-GVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQT 477 (621)
T ss_pred cCcEEEEe-cChHHHHHHHHHHhC-CCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeCCHHH
Confidence 36899999 999999999988884 99999999999999999988865433 22222211 2234789999888752
Q ss_pred ----HHHHhhcccCCEEEEEe
Q 021628 226 ----DKALKAVKEGGRVVSII 242 (310)
Q Consensus 226 ----~~~~~~l~~~G~~v~~g 242 (310)
-...+.+.|.-+++.-.
T Consensus 478 n~~i~~~ar~~~p~~~iiaRa 498 (621)
T PRK03562 478 SLQLVELVKEHFPHLQIIARA 498 (621)
T ss_pred HHHHHHHHHHhCCCCeEEEEE
Confidence 23445555665665443
No 434
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=92.60 E-value=0.66 Score=34.95 Aligned_cols=86 Identities=26% Similarity=0.432 Sum_probs=53.7
Q ss_pred EEEEcCCcchHHHHHHHHHhhcC--CcEEEEec--ChhhH-HHHHHcCCCEEeeCCCCcccc------------------
Q 021628 154 ILVLGGAGGVGTMVIQLAKHVFG--ASKVAATS--STAKL-DLLRSLGADLAIDYTKENIED------------------ 210 (310)
Q Consensus 154 vlI~g~~g~~G~~a~~la~~~~g--~~vi~~~~--~~~~~-~~~~~~g~~~~~~~~~~~~~~------------------ 210 (310)
|.|+|++|.+|.-++.+.+.. . .+++.... +-+++ +.+++|.+.++.-.+++....
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~-~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~ 79 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKH-PDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP 79 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHC-TTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred CEEEcCCcHHHHHHHHHHHhC-CCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence 679999999999999999985 5 56776653 44443 344778887776544322110
Q ss_pred -----c--CCCccEEEeCC-C--ChHHHHhhcccCCEEEE
Q 021628 211 -----L--PEKFDVVFDAV-G--QCDKALKAVKEGGRVVS 240 (310)
Q Consensus 211 -----~--~~~~dvvi~~~-g--~~~~~~~~l~~~G~~v~ 240 (310)
. ...+|+|+.+. | .+.-.+..+..+-++.+
T Consensus 80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL 119 (129)
T PF02670_consen 80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL 119 (129)
T ss_dssp HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence 0 13689999884 5 35777777776655543
No 435
>PRK06128 oxidoreductase; Provisional
Probab=92.53 E-value=0.75 Score=40.14 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=29.2
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS 185 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~ 185 (310)
.+.++||+|+++.+|.+.+..+... |++|+++.++
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~-G~~V~i~~~~ 88 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFARE-GADIALNYLP 88 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHc-CCEEEEEeCC
Confidence 4689999999999999988877764 9999887654
No 436
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.49 E-value=1.4 Score=37.87 Aligned_cols=95 Identities=26% Similarity=0.326 Sum_probs=66.5
Q ss_pred cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (310)
Q Consensus 131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (310)
..||+....+..++..++ -.|++|+|.|.+..+|.-...++... ++.|+++-+.-. ++.
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~-~AtVt~chs~T~-------------------~l~ 196 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNE-NATVTICHSKTK-------------------NLK 196 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHC-CCEEEEeCCCCC-------------------CHH
Confidence 456665555555555443 47999999999999999988888874 887877654322 222
Q ss_pred ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628 210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~ 245 (310)
+..+.+|+++.++|... -.-+++++|..++.+|...
T Consensus 197 ~~~~~ADIvIsAvGkp~~i~~~~ik~gavVIDvGin~ 233 (278)
T PRK14172 197 EVCKKADILVVAIGRPKFIDEEYVKEGAIVIDVGTSS 233 (278)
T ss_pred HHHhhCCEEEEcCCCcCccCHHHcCCCcEEEEeeccc
Confidence 33457899999999542 2346788999999998544
No 437
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=92.49 E-value=0.33 Score=41.09 Aligned_cols=42 Identities=29% Similarity=0.468 Sum_probs=34.9
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|+++.+|...+..+... |++++++++++++.+.+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~-G~~vvl~~r~~~~~~~~ 49 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEY-GAEIIINDITAERAELA 49 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHc-CCEEEEEcCCHHHHHHH
Confidence 4678999999999999988877764 99999999987765444
No 438
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.41 E-value=0.69 Score=39.31 Aligned_cols=36 Identities=31% Similarity=0.362 Sum_probs=29.1
Q ss_pred CCCEEEEEcC--CcchHHHHHHHHHhhcCCcEEEEecCh
Q 021628 150 AGKSILVLGG--AGGVGTMVIQLAKHVFGASKVAATSST 186 (310)
Q Consensus 150 ~g~~vlI~g~--~g~~G~~a~~la~~~~g~~vi~~~~~~ 186 (310)
.+.+++|+|+ ++++|.+.++.+... |++|+++.++.
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~-G~~v~l~~r~~ 43 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQ-GAEVVLTGFGR 43 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHC-CCEEEEecCcc
Confidence 4679999998 799999988766664 99999887653
No 439
>PRK09186 flagellin modification protein A; Provisional
Probab=92.39 E-value=0.34 Score=40.93 Aligned_cols=42 Identities=29% Similarity=0.486 Sum_probs=34.9
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|++|.+|...+..+... |++|+++.+++++.+.+
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~ 44 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEA-GGIVIAADIDKEALNEL 44 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEecChHHHHHH
Confidence 4689999999999999988877764 99999999887776544
No 440
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=92.37 E-value=0.34 Score=41.05 Aligned_cols=43 Identities=33% Similarity=0.382 Sum_probs=36.0
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR 193 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~ 193 (310)
.+.+++|+|++|.+|...+..+... |.+|++++++.++.+.+.
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~ 47 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAE-GARVVIADIKPARARLAA 47 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHH
Confidence 3678999999999999988877774 999999999888766553
No 441
>PRK06823 ornithine cyclodeaminase; Validated
Probab=92.36 E-value=1.6 Score=38.58 Aligned_cols=92 Identities=13% Similarity=0.190 Sum_probs=61.3
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHH----HcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLR----SLGADLAIDYTKENIEDLPEKFDVVFDAVG 223 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g 223 (310)
+...++.|+| +|..+.+.++.....+.. +|.+..+++++.+.+. +.+...... .+..+..+++|+|+.|++
T Consensus 126 ~d~~~l~iiG-~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~~---~~~~~av~~ADIV~taT~ 201 (315)
T PRK06823 126 QHVSAIGIVG-TGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNTT---LDAAEVAHAANLIVTTTP 201 (315)
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEE---CCHHHHhcCCCEEEEecC
Confidence 4567899999 999998887766654454 6778889988876542 223322211 122344578999999877
Q ss_pred ChHH--HHhhcccCCEEEEEeCC
Q 021628 224 QCDK--ALKAVKEGGRVVSIIGS 244 (310)
Q Consensus 224 ~~~~--~~~~l~~~G~~v~~g~~ 244 (310)
+..- -.+.++++-.+..+|.+
T Consensus 202 s~~P~~~~~~l~~G~hi~~iGs~ 224 (315)
T PRK06823 202 SREPLLQAEDIQPGTHITAVGAD 224 (315)
T ss_pred CCCceeCHHHcCCCcEEEecCCC
Confidence 4321 23578888888888854
No 442
>PRK12939 short chain dehydrogenase; Provisional
Probab=92.36 E-value=0.36 Score=40.53 Aligned_cols=42 Identities=31% Similarity=0.381 Sum_probs=34.9
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|++|.+|...+..+... |.+++++.+++++.+.+
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~ 47 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEA-GATVAFNDGLAAEAREL 47 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 4789999999999999988877774 99999998887765544
No 443
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=92.36 E-value=0.81 Score=44.24 Aligned_cols=91 Identities=12% Similarity=0.129 Sum_probs=65.3
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEe-eCCCCccc--ccCCCccEEEeCCCCh--
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTKENIE--DLPEKFDVVFDAVGQC-- 225 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~--~~~~~~dvvi~~~g~~-- 225 (310)
.++|+|.| .|.+|+..++.++.. +.++++++.++++.+.+++.|...+. |..+++.- ...+.+|.++-+.++.
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~-g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d~~~ 477 (601)
T PRK03659 400 KPQVIIVG-FGRFGQVIGRLLMAN-KMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNEPED 477 (601)
T ss_pred cCCEEEec-CchHHHHHHHHHHhC-CCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCCHHH
Confidence 36899999 999999999988874 89999999999999999988865443 22222211 1234789999888753
Q ss_pred ----HHHHhhcccCCEEEEEeC
Q 021628 226 ----DKALKAVKEGGRVVSIIG 243 (310)
Q Consensus 226 ----~~~~~~l~~~G~~v~~g~ 243 (310)
-...+...|.-+++.-..
T Consensus 478 n~~i~~~~r~~~p~~~IiaRa~ 499 (601)
T PRK03659 478 TMKIVELCQQHFPHLHILARAR 499 (601)
T ss_pred HHHHHHHHHHHCCCCeEEEEeC
Confidence 234456667777776543
No 444
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=92.34 E-value=0.37 Score=40.77 Aligned_cols=42 Identities=29% Similarity=0.393 Sum_probs=34.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|+++.+|...+..+... |++|+++.+++++++.+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~-G~~v~~~~r~~~~~~~~ 51 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGA-GAHVLVNGRNAATLEAA 51 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHc-CCeEEEEeCCHHHHHHH
Confidence 5789999999999999988876664 99999999987765443
No 445
>PRK09242 tropinone reductase; Provisional
Probab=92.30 E-value=0.36 Score=40.88 Aligned_cols=42 Identities=19% Similarity=0.345 Sum_probs=35.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|+++.+|...+..+... |++|+++.+++++.+.+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~ 49 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGL-GADVLIVARDADALAQA 49 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 4789999999999999988877774 99999999988776544
No 446
>PRK00536 speE spermidine synthase; Provisional
Probab=92.30 E-value=0.87 Score=38.90 Aligned_cols=91 Identities=20% Similarity=0.145 Sum_probs=60.1
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCc------ccc-cCCCccEEE-eC
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN------IED-LPEKFDVVF-DA 221 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~------~~~-~~~~~dvvi-~~ 221 (310)
..++|||.| |+=|.++-+++|.- .+|+.++.+++=.+.++++-+..--..+++. ..+ ..+.+|+|| |+
T Consensus 72 ~pk~VLIiG--GGDGg~~REvLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvDs 147 (262)
T PRK00536 72 ELKEVLIVD--GFDLELAHQLFKYD--THVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICLQ 147 (262)
T ss_pred CCCeEEEEc--CCchHHHHHHHCcC--CeeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEcC
Confidence 448999998 77788888999973 4888999898888877773211000011111 111 124699886 44
Q ss_pred CCC---hHHHHhhcccCCEEEEEeCC
Q 021628 222 VGQ---CDKALKAVKEGGRVVSIIGS 244 (310)
Q Consensus 222 ~g~---~~~~~~~l~~~G~~v~~g~~ 244 (310)
... .+.+.++|+++|.++.-+..
T Consensus 148 ~~~~~fy~~~~~~L~~~Gi~v~Qs~s 173 (262)
T PRK00536 148 EPDIHKIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_pred CCChHHHHHHHHhcCCCcEEEECCCC
Confidence 433 26788999999999987653
No 447
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=92.26 E-value=0.36 Score=42.42 Aligned_cols=72 Identities=18% Similarity=0.294 Sum_probs=45.5
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH---Hc-CC--C-EEeeCC--C-CcccccCCCccEEEe
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR---SL-GA--D-LAIDYT--K-ENIEDLPEKFDVVFD 220 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~---~~-g~--~-~~~~~~--~-~~~~~~~~~~dvvi~ 220 (310)
+.+|+|+|++|-+|...+..+... |.+|++++++.++..... .+ +. . ..+..+ + ..+....+++|.||.
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 82 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQR-GYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH 82 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHC-CCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence 578999999999999988877774 999998888765432221 11 11 1 122221 1 112223357899998
Q ss_pred CCC
Q 021628 221 AVG 223 (310)
Q Consensus 221 ~~g 223 (310)
+++
T Consensus 83 ~A~ 85 (322)
T PLN02662 83 TAS 85 (322)
T ss_pred eCC
Confidence 875
No 448
>PRK08278 short chain dehydrogenase; Provisional
Probab=92.25 E-value=0.76 Score=39.45 Aligned_cols=37 Identities=27% Similarity=0.490 Sum_probs=30.9
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA 187 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~ 187 (310)
.+.+++|+|+++.+|...+..+... |++|+++.++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARD-GANIVIAAKTAE 41 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEecccc
Confidence 4678999999999999988877664 999999988654
No 449
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=92.24 E-value=0.67 Score=36.28 Aligned_cols=84 Identities=19% Similarity=0.301 Sum_probs=55.9
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh-hHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC----
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---- 224 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---- 224 (310)
.+++|.|+| .|.-|.+.++-+|.. |.+|++..+..+ ..+.+++-|... . +..+..+..|+|+-..++
T Consensus 3 ~~k~IAViG-yGsQG~a~AlNLrDS-G~~V~Vglr~~s~s~~~A~~~Gf~v-~-----~~~eAv~~aDvV~~L~PD~~q~ 74 (165)
T PF07991_consen 3 KGKTIAVIG-YGSQGHAHALNLRDS-GVNVIVGLREGSASWEKAKADGFEV-M-----SVAEAVKKADVVMLLLPDEVQP 74 (165)
T ss_dssp CTSEEEEES--SHHHHHHHHHHHHC-C-EEEEEE-TTCHHHHHHHHTT-EC-C-----EHHHHHHC-SEEEE-S-HHHHH
T ss_pred CCCEEEEEC-CChHHHHHHHHHHhC-CCCEEEEecCCCcCHHHHHHCCCee-c-----cHHHHHhhCCEEEEeCChHHHH
Confidence 578999999 899999999999995 999999998766 677777777531 1 223344578999998873
Q ss_pred --h-HHHHhhcccCCEEEEE
Q 021628 225 --C-DKALKAVKEGGRVVSI 241 (310)
Q Consensus 225 --~-~~~~~~l~~~G~~v~~ 241 (310)
. ++....|+++-.+++.
T Consensus 75 ~vy~~~I~p~l~~G~~L~fa 94 (165)
T PF07991_consen 75 EVYEEEIAPNLKPGATLVFA 94 (165)
T ss_dssp HHHHHHHHHHS-TT-EEEES
T ss_pred HHHHHHHHhhCCCCCEEEeC
Confidence 1 4555688888877655
No 450
>PRK06181 short chain dehydrogenase; Provisional
Probab=92.20 E-value=0.36 Score=41.07 Aligned_cols=41 Identities=27% Similarity=0.468 Sum_probs=33.5
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
+.+++|+|++|.+|...++.+... |++|+++++++++.+.+
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~-g~~Vi~~~r~~~~~~~~ 41 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARA-GAQLVLAARNETRLASL 41 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 357999999999999988877774 89999999987665433
No 451
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=92.19 E-value=0.38 Score=40.59 Aligned_cols=42 Identities=29% Similarity=0.320 Sum_probs=35.0
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|++|.+|...+..+... |.+|+++++++++.+.+
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~ 44 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKE-GAKVVIADLNDEAAAAA 44 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHH
Confidence 3579999999999999988877764 99999999988776544
No 452
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=92.17 E-value=0.65 Score=39.53 Aligned_cols=34 Identities=26% Similarity=0.179 Sum_probs=26.9
Q ss_pred CCCEEEEEcCC--cchHHHHHHHHHhhcCCcEEEEec
Q 021628 150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATS 184 (310)
Q Consensus 150 ~g~~vlI~g~~--g~~G~~a~~la~~~~g~~vi~~~~ 184 (310)
.|.+++|+|++ +++|.+.+..+... |++|+++.+
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~-G~~v~~~~~ 40 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAA-GAELGITYL 40 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHC-CCEEEEEec
Confidence 46899999975 79999977766664 999987754
No 453
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.16 E-value=1.8 Score=37.24 Aligned_cols=95 Identities=22% Similarity=0.234 Sum_probs=65.6
Q ss_pred cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (310)
Q Consensus 131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (310)
..||+....+..++..+. -.|.+|+|+|.+..+|.....++... ++.|++..+....+.
T Consensus 131 ~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~-~atVtv~hs~t~~L~------------------- 190 (279)
T PRK14178 131 FAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNA-DATVTICHSKTENLK------------------- 190 (279)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhC-CCeeEEEecChhHHH-------------------
Confidence 446665445555554443 47899999998889999988888884 898888876543332
Q ss_pred ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628 210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~ 245 (310)
+..+.+|++|.++|... -.-++++++..++.+|...
T Consensus 191 ~~~~~ADIvI~Avgk~~lv~~~~vk~GavVIDVgi~~ 227 (279)
T PRK14178 191 AELRQADILVSAAGKAGFITPDMVKPGATVIDVGINQ 227 (279)
T ss_pred HHHhhCCEEEECCCcccccCHHHcCCCcEEEEeeccc
Confidence 22346889999998421 1123479999999998543
No 454
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=92.15 E-value=0.37 Score=42.47 Aligned_cols=93 Identities=15% Similarity=0.161 Sum_probs=50.8
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHc---CCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSL---GADLAIDYTKENIEDLPEKFDVVFDAVG 223 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~---g~~~~~~~~~~~~~~~~~~~dvvi~~~g 223 (310)
+...++.|+| +|.-+.+.+..+...++. +|.+..+++++.+.+ +++ +...... ++..+..+++|+|+-|++
T Consensus 126 ~~~~~l~viG-aG~QA~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~v~~~---~~~~~av~~aDii~taT~ 201 (313)
T PF02423_consen 126 PDARTLGVIG-AGVQARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRDLGVPVVAV---DSAEEAVRGADIIVTATP 201 (313)
T ss_dssp TT--EEEEE---SHHHHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHCCCTCEEEE---SSHHHHHTTSSEEEE---
T ss_pred CCCceEEEEC-CCHHHHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhccccccceec---cchhhhcccCCEEEEccC
Confidence 4457899999 999999988877665565 677888898876555 333 2222211 122334568999999876
Q ss_pred ChH----HHHhhcccCCEEEEEeCCC
Q 021628 224 QCD----KALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 224 ~~~----~~~~~l~~~G~~v~~g~~~ 245 (310)
+.. --.+.++++-.+..+|.+.
T Consensus 202 s~~~~P~~~~~~l~~g~hi~~iGs~~ 227 (313)
T PF02423_consen 202 STTPAPVFDAEWLKPGTHINAIGSYT 227 (313)
T ss_dssp -SSEEESB-GGGS-TT-EEEE-S-SS
T ss_pred CCCCCccccHHHcCCCcEEEEecCCC
Confidence 432 3346788888888888653
No 455
>TIGR00452 methyltransferase, putative. Known examples to date are restricted to the proteobacteria.
Probab=92.15 E-value=2 Score=37.80 Aligned_cols=94 Identities=20% Similarity=0.204 Sum_probs=57.0
Q ss_pred HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHH---HHHc-C---CCEEeeCCCCcccccCCCcc
Q 021628 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL---LRSL-G---ADLAIDYTKENIEDLPEKFD 216 (310)
Q Consensus 144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~---~~~~-g---~~~~~~~~~~~~~~~~~~~d 216 (310)
......+|++|+=.| +|. |..+..++.. +...|+.++.++.-+.. ++++ + ...+....-++... ...||
T Consensus 115 ~~l~~~~g~~VLDvG-CG~-G~~~~~~~~~-g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~~~ie~lp~-~~~FD 190 (314)
T TIGR00452 115 PHLSPLKGRTILDVG-CGS-GYHMWRMLGH-GAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEPLGIEQLHE-LYAFD 190 (314)
T ss_pred HhcCCCCCCEEEEec-cCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEECCHHHCCC-CCCcC
Confidence 344567789999999 655 7777777665 23468888888765433 2222 2 11222222122221 23699
Q ss_pred EEEeCCC-----C----hHHHHhhcccCCEEEEE
Q 021628 217 VVFDAVG-----Q----CDKALKAVKEGGRVVSI 241 (310)
Q Consensus 217 vvi~~~g-----~----~~~~~~~l~~~G~~v~~ 241 (310)
+|+...- + +.++.+.|++||+++..
T Consensus 191 ~V~s~gvL~H~~dp~~~L~el~r~LkpGG~Lvle 224 (314)
T TIGR00452 191 TVFSMGVLYHRKSPLEHLKQLKHQLVIKGELVLE 224 (314)
T ss_pred EEEEcchhhccCCHHHHHHHHHHhcCCCCEEEEE
Confidence 9986531 2 37888999999999864
No 456
>KOG1270 consensus Methyltransferases [Coenzyme transport and metabolism]
Probab=92.11 E-value=0.56 Score=39.63 Aligned_cols=87 Identities=25% Similarity=0.392 Sum_probs=60.6
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc---------CCCEEeeCCCCcccccCCCccEEEeC
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL---------GADLAIDYTKENIEDLPEKFDVVFDA 221 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~dvvi~~ 221 (310)
|.+|+=.| +|+ |++...+|+. |+.|+.++.+++-.+.+++- +..+.+++.+.+.......||.|+..
T Consensus 90 g~~ilDvG-CGg-GLLSepLArl--ga~V~GID~s~~~V~vA~~h~~~dP~~~~~~~y~l~~~~~~~E~~~~~fDaVvcs 165 (282)
T KOG1270|consen 90 GMKILDVG-CGG-GLLSEPLARL--GAQVTGIDASDDMVEVANEHKKMDPVLEGAIAYRLEYEDTDVEGLTGKFDAVVCS 165 (282)
T ss_pred CceEEEec-cCc-cccchhhHhh--CCeeEeecccHHHHHHHHHhhhcCchhccccceeeehhhcchhhcccccceeeeH
Confidence 46777776 444 8999999996 89999999998887777532 12233455555555555568988754
Q ss_pred CC-----C----hHHHHhhcccCCEEEEE
Q 021628 222 VG-----Q----CDKALKAVKEGGRVVSI 241 (310)
Q Consensus 222 ~g-----~----~~~~~~~l~~~G~~v~~ 241 (310)
-= . ++..++.|+|+|+++..
T Consensus 166 evleHV~dp~~~l~~l~~~lkP~G~lfit 194 (282)
T KOG1270|consen 166 EVLEHVKDPQEFLNCLSALLKPNGRLFIT 194 (282)
T ss_pred HHHHHHhCHHHHHHHHHHHhCCCCceEee
Confidence 21 1 36788899999999765
No 457
>PRK05855 short chain dehydrogenase; Validated
Probab=92.09 E-value=0.63 Score=44.49 Aligned_cols=42 Identities=26% Similarity=0.345 Sum_probs=34.6
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|++|++|...++.+... |.+|+++.++.++++.+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~-G~~v~~~~r~~~~~~~~ 355 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFARE-GAEVVASDIDEAAAERT 355 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 4578999999999999877776664 99999999988776554
No 458
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=92.09 E-value=0.29 Score=43.77 Aligned_cols=38 Identities=24% Similarity=0.293 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK 188 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~ 188 (310)
.|.+|+|+|++|.+|...+..+... |.+|+++++++..
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~-G~~V~~~~r~~~~ 40 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLEL-GAEVYGYSLDPPT 40 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHC-CCEEEEEeCCCcc
Confidence 3678999999999999988887774 9999999886654
No 459
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=92.07 E-value=0.55 Score=41.55 Aligned_cols=74 Identities=22% Similarity=0.234 Sum_probs=44.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHH-HHcCC-C-EEe--eCCC-CcccccCCCccEEEeCC
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLL-RSLGA-D-LAI--DYTK-ENIEDLPEKFDVVFDAV 222 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~-~~~g~-~-~~~--~~~~-~~~~~~~~~~dvvi~~~ 222 (310)
.|.+|+|+|++|.+|...+..+...+ +.+|+++++++.+...+ +.+.. . .++ +..+ +......+++|+||+++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 36789999999999999887666542 26788888766554333 22321 1 122 2111 11122234689999987
Q ss_pred C
Q 021628 223 G 223 (310)
Q Consensus 223 g 223 (310)
+
T Consensus 83 g 83 (324)
T TIGR03589 83 A 83 (324)
T ss_pred c
Confidence 6
No 460
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=92.05 E-value=1.8 Score=35.93 Aligned_cols=91 Identities=18% Similarity=0.163 Sum_probs=58.2
Q ss_pred ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEE-----------------eeCCCCcc
Q 021628 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLA-----------------IDYTKENI 208 (310)
Q Consensus 147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~-----------------~~~~~~~~ 208 (310)
...++.+||+.| .+.|.-++.+|.. |.+|++++.++...+.+ ++.+.... ...+-.++
T Consensus 34 ~~~~~~rvL~~g--CG~G~da~~LA~~--G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l 109 (218)
T PRK13255 34 ALPAGSRVLVPL--CGKSLDMLWLAEQ--GHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFAL 109 (218)
T ss_pred CCCCCCeEEEeC--CCChHhHHHHHhC--CCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCC
Confidence 445678999998 4568888888874 99999999999987765 33332110 00100111
Q ss_pred c-ccCCCccEEEeCCC--C---------hHHHHhhcccCCEEEEE
Q 021628 209 E-DLPEKFDVVFDAVG--Q---------CDKALKAVKEGGRVVSI 241 (310)
Q Consensus 209 ~-~~~~~~dvvi~~~g--~---------~~~~~~~l~~~G~~v~~ 241 (310)
. .....+|.|+|..- . ...+.+.|+|+|++..+
T Consensus 110 ~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 110 TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 1 11236899998753 1 26777899999875543
No 461
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=92.05 E-value=0.55 Score=35.37 Aligned_cols=78 Identities=26% Similarity=0.350 Sum_probs=46.5
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEe-cChhhHHHHHH-cCCCEEeeCCCCcccccCCCccEEEeCCCC--hH
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRS-LGADLAIDYTKENIEDLPEKFDVVFDAVGQ--CD 226 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~-~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~--~~ 226 (310)
.-+|-|+| +|.+|......++.. |..|..+. ++.+..+.+.. ++...+.+ ..+..+.+|++|-++++ +.
T Consensus 10 ~l~I~iIG-aGrVG~~La~aL~~a-g~~v~~v~srs~~sa~~a~~~~~~~~~~~-----~~~~~~~aDlv~iavpDdaI~ 82 (127)
T PF10727_consen 10 RLKIGIIG-AGRVGTALARALARA-GHEVVGVYSRSPASAERAAAFIGAGAILD-----LEEILRDADLVFIAVPDDAIA 82 (127)
T ss_dssp --EEEEEC-TSCCCCHHHHHHHHT-TSEEEEESSCHH-HHHHHHC--TT----------TTGGGCC-SEEEE-S-CCHHH
T ss_pred ccEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEEeCCcccccccccccccccccc-----cccccccCCEEEEEechHHHH
Confidence 34789999 899999888888875 88887664 56666666654 33332332 23334578999998874 46
Q ss_pred HHHhhcccC
Q 021628 227 KALKAVKEG 235 (310)
Q Consensus 227 ~~~~~l~~~ 235 (310)
..++.|...
T Consensus 83 ~va~~La~~ 91 (127)
T PF10727_consen 83 EVAEQLAQY 91 (127)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHHHh
Confidence 666666554
No 462
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=92.05 E-value=0.72 Score=41.95 Aligned_cols=91 Identities=24% Similarity=0.346 Sum_probs=58.5
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEEeCCCCh-
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC- 225 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~- 225 (310)
-.+.+|+++| +|-+|.+++..+... | .++++.-|+.+|...+ +++|...+ ..+ ........+|+||.+++++
T Consensus 176 L~~~~vlvIG-AGem~~lva~~L~~~-g~~~i~IaNRT~erA~~La~~~~~~~~-~l~--el~~~l~~~DvVissTsa~~ 250 (414)
T COG0373 176 LKDKKVLVIG-AGEMGELVAKHLAEK-GVKKITIANRTLERAEELAKKLGAEAV-ALE--ELLEALAEADVVISSTSAPH 250 (414)
T ss_pred cccCeEEEEc-ccHHHHHHHHHHHhC-CCCEEEEEcCCHHHHHHHHHHhCCeee-cHH--HHHHhhhhCCEEEEecCCCc
Confidence 4678999999 899998888777764 7 4677778888886655 78884332 111 1122345799999998742
Q ss_pred -----HHHHhhcccCCE--EEEEeCC
Q 021628 226 -----DKALKAVKEGGR--VVSIIGS 244 (310)
Q Consensus 226 -----~~~~~~l~~~G~--~v~~g~~ 244 (310)
......+.+.-+ ++..+.+
T Consensus 251 ~ii~~~~ve~a~~~r~~~livDiavP 276 (414)
T COG0373 251 PIITREMVERALKIRKRLLIVDIAVP 276 (414)
T ss_pred cccCHHHHHHHHhcccCeEEEEecCC
Confidence 333344444333 4455554
No 463
>PRK08251 short chain dehydrogenase; Provisional
Probab=92.02 E-value=0.4 Score=40.31 Aligned_cols=41 Identities=22% Similarity=0.344 Sum_probs=33.5
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
+.+++|+|++|++|...+..+... |++|+++++++++.+.+
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~-g~~v~~~~r~~~~~~~~ 42 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAK-GRDLALCARRTDRLEEL 42 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 468999999999999877766554 89999999988876655
No 464
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=92.01 E-value=0.41 Score=39.97 Aligned_cols=42 Identities=29% Similarity=0.374 Sum_probs=34.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
++.+++|+|++|.+|...+..+... |.+|+++.+++++.+.+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~ 45 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAAD-GAKVVIYDSNEEAAEAL 45 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCChhHHHHH
Confidence 3578999999999999988877774 99999999988775543
No 465
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=92.00 E-value=0.34 Score=42.11 Aligned_cols=40 Identities=18% Similarity=0.275 Sum_probs=32.9
Q ss_pred CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH
Q 021628 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR 193 (310)
Q Consensus 152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~ 193 (310)
.+|.|+| +|.+|...+..+... |.+|++.++++++.+.+.
T Consensus 2 ~~V~VIG-~G~mG~~iA~~la~~-G~~V~~~d~~~~~~~~~~ 41 (288)
T PRK09260 2 EKLVVVG-AGVMGRGIAYVFAVS-GFQTTLVDIKQEQLESAQ 41 (288)
T ss_pred cEEEEEC-ccHHHHHHHHHHHhC-CCcEEEEeCCHHHHHHHH
Confidence 4689999 899998877766664 899999999999877764
No 466
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=91.96 E-value=0.99 Score=37.39 Aligned_cols=97 Identities=23% Similarity=0.294 Sum_probs=66.1
Q ss_pred hcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHH----HcCCCEE---eeC-CCCc-cc-ccCC
Q 021628 145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR----SLGADLA---IDY-TKEN-IE-DLPE 213 (310)
Q Consensus 145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~----~~g~~~~---~~~-~~~~-~~-~~~~ 213 (310)
.++.....+||-+| +.+|..++.+|..+. ..+++.++.++++.+.++ +.|.+.. +.. +.-+ +. ...+
T Consensus 54 L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~~~~~ 131 (219)
T COG4122 54 LARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSRLLDG 131 (219)
T ss_pred HHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHhccCC
Confidence 45556788999998 778999999999874 357888888999887775 4564432 121 1111 11 1245
Q ss_pred CccEEE-eCCC-C----hHHHHhhcccCCEEEEEeC
Q 021628 214 KFDVVF-DAVG-Q----CDKALKAVKEGGRVVSIIG 243 (310)
Q Consensus 214 ~~dvvi-~~~g-~----~~~~~~~l~~~G~~v~~g~ 243 (310)
.+|+|| |+.- . ++.+++.|++||.++.=..
T Consensus 132 ~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DNv 167 (219)
T COG4122 132 SFDLVFIDADKADYPEYLERALPLLRPGGLIVADNV 167 (219)
T ss_pred CccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEeec
Confidence 799885 6653 2 4899999999999986543
No 467
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.95 E-value=1.3 Score=38.22 Aligned_cols=93 Identities=26% Similarity=0.324 Sum_probs=63.1
Q ss_pred cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (310)
Q Consensus 131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (310)
..||+.......++..+. -.|.+|++.|.++.+|.-.+.++... |+.|++.-...+ +..
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~-gatVtv~~s~t~-------------------~l~ 196 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDK-NATVTLTHSRTR-------------------NLA 196 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHC-CCEEEEECCCCC-------------------CHH
Confidence 346665444444554443 57999999998899999888877774 898887722111 223
Q ss_pred ccCCCccEEEeCCCCh---HHHHhhcccCCEEEEEeCCC
Q 021628 210 DLPEKFDVVFDAVGQC---DKALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 210 ~~~~~~dvvi~~~g~~---~~~~~~l~~~G~~v~~g~~~ 245 (310)
+..+.+|+||-++|.. .. .+++++..++.+|...
T Consensus 197 ~~~~~ADIVI~avg~~~~v~~--~~ik~GavVIDvgin~ 233 (284)
T PRK14179 197 EVARKADILVVAIGRGHFVTK--EFVKEGAVVIDVGMNR 233 (284)
T ss_pred HHHhhCCEEEEecCccccCCH--HHccCCcEEEEeccee
Confidence 3345789999999853 22 3488899999888543
No 468
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=91.94 E-value=0.41 Score=40.20 Aligned_cols=41 Identities=22% Similarity=0.297 Sum_probs=33.6
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL 191 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~ 191 (310)
.+.+++|+|++|.+|...+..+... |.+|++++++.++...
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~ 45 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAAD-GAEVIVVDICGDDAAA 45 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHH
Confidence 4678999999999999988877764 8999999998665443
No 469
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=91.93 E-value=0.45 Score=39.80 Aligned_cols=42 Identities=21% Similarity=0.335 Sum_probs=34.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+.+++|+|++|.+|...+..+... |++|+++++++++.+.+
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~-G~~Vi~~~r~~~~~~~~ 47 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKE-GVNVGLLARTEENLKAV 47 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 3578999999999999988876664 89999999987765443
No 470
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.93 E-value=1.4 Score=38.05 Aligned_cols=95 Identities=23% Similarity=0.267 Sum_probs=65.2
Q ss_pred cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (310)
Q Consensus 131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (310)
..||+.......++..++ -.|.+|+|.|.+..+|.-...++... ++.|+++-+.-. ++.
T Consensus 136 ~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~-~AtVtichs~T~-------------------nl~ 195 (282)
T PRK14182 136 PRPCTPAGVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLER-HATVTIAHSRTA-------------------DLA 195 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEEEeCCCCC-------------------CHH
Confidence 356665555555554443 47999999999999999988888774 887776643221 222
Q ss_pred ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628 210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~ 245 (310)
+..+.+|+++.++|... -.-++++++..++.+|...
T Consensus 196 ~~~~~ADIvI~AvGk~~~i~~~~ik~gaiVIDvGin~ 232 (282)
T PRK14182 196 GEVGRADILVAAIGKAELVKGAWVKEGAVVIDVGMNR 232 (282)
T ss_pred HHHhhCCEEEEecCCcCccCHHHcCCCCEEEEeecee
Confidence 33457899999998532 2346788899999998543
No 471
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=91.92 E-value=3.2 Score=38.32 Aligned_cols=96 Identities=21% Similarity=0.169 Sum_probs=59.3
Q ss_pred HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCE-E--eeCCCCcccc--cCCC
Q 021628 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL-A--IDYTKENIED--LPEK 214 (310)
Q Consensus 144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~--~~~~ 214 (310)
....+++|++|+=.| .+.|..+.++++.+.+.++++++.++++++.++ .+|... + .+.+...... ....
T Consensus 232 ~~L~~~~g~~VLDlc--ag~G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~~~~~~~~~ 309 (426)
T TIGR00563 232 TWLAPQNEETILDAC--AAPGGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGPSQWAENEQ 309 (426)
T ss_pred HHhCCCCCCeEEEeC--CCccHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccccccccccccccc
Confidence 445678999988876 334555556666542368999999999987763 456542 2 2221111111 1346
Q ss_pred ccEEEe---CCC--C--------------------------hHHHHhhcccCCEEEEE
Q 021628 215 FDVVFD---AVG--Q--------------------------CDKALKAVKEGGRVVSI 241 (310)
Q Consensus 215 ~dvvi~---~~g--~--------------------------~~~~~~~l~~~G~~v~~ 241 (310)
+|.||- |+| . +..+++.|+|||+++..
T Consensus 310 fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvys 367 (426)
T TIGR00563 310 FDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYA 367 (426)
T ss_pred cCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 898873 333 1 13577889999999855
No 472
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=91.90 E-value=0.81 Score=42.50 Aligned_cols=69 Identities=29% Similarity=0.468 Sum_probs=46.1
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh-hhH----HHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKL----DLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG 223 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~-~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g 223 (310)
.+.+|+|+| .|.+|+.++..+... |++|++.+.++ +.. +.+.+.|...+. .+..+ ...+++|+|+.+.|
T Consensus 4 ~~k~v~iiG-~g~~G~~~A~~l~~~-G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~-~~~~~--~~~~~~d~vv~~~g 77 (450)
T PRK14106 4 KGKKVLVVG-AGVSGLALAKFLKKL-GAKVILTDEKEEDQLKEALEELGELGIELVL-GEYPE--EFLEGVDLVVVSPG 77 (450)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHhcCCEEEe-CCcch--hHhhcCCEEEECCC
Confidence 468999999 666999988888885 99999998864 222 333445544222 21111 22357899998887
No 473
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=91.89 E-value=2 Score=34.51 Aligned_cols=89 Identities=26% Similarity=0.363 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCE--EeeCCCCcccccCCCccEEEeCC-
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL--AIDYTKENIEDLPEKFDVVFDAV- 222 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~~~~~~~dvvi~~~- 222 (310)
++++|+=.| .+.|..++.+++...+.+|+.++.+++..+.++ +.+.+. ++..+..+. ...+.+|+|+...
T Consensus 42 ~~~~vLDiG--cGtG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~d~~~~-~~~~~fD~I~s~~~ 118 (181)
T TIGR00138 42 DGKKVIDIG--SGAGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNGRAEDF-QHEEQFDVITSRAL 118 (181)
T ss_pred CCCeEEEec--CCCCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEecchhhc-cccCCccEEEehhh
Confidence 488999888 334566666665422468999999988665553 345432 233322222 1235799988653
Q ss_pred CC----hHHHHhhcccCCEEEEE
Q 021628 223 GQ----CDKALKAVKEGGRVVSI 241 (310)
Q Consensus 223 g~----~~~~~~~l~~~G~~v~~ 241 (310)
.. .+.+.+.|+++|+++..
T Consensus 119 ~~~~~~~~~~~~~LkpgG~lvi~ 141 (181)
T TIGR00138 119 ASLNVLLELTLNLLKVGGYFLAY 141 (181)
T ss_pred hCHHHHHHHHHHhcCCCCEEEEE
Confidence 22 25677889999999866
No 474
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=91.84 E-value=0.51 Score=44.79 Aligned_cols=70 Identities=29% Similarity=0.371 Sum_probs=46.5
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVG 223 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g 223 (310)
.+.+++|+| +|++|.+++..+... |++++++.++.++.+.+ ++++.. .+...+. ........|++++|++
T Consensus 378 ~~k~vlIlG-aGGagrAia~~L~~~-G~~V~i~nR~~e~a~~la~~l~~~-~~~~~~~-~~~~~~~~diiINtT~ 448 (529)
T PLN02520 378 AGKLFVVIG-AGGAGKALAYGAKEK-GARVVIANRTYERAKELADAVGGQ-ALTLADL-ENFHPEEGMILANTTS 448 (529)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhCCc-eeeHhHh-hhhccccCeEEEeccc
Confidence 467899999 689999988888775 88888888888877666 445432 2222110 0011235789998875
No 475
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.80 E-value=1.3 Score=38.47 Aligned_cols=95 Identities=19% Similarity=0.208 Sum_probs=65.9
Q ss_pred cccchHHHHHHHHHhcc-cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628 131 SLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (310)
Q Consensus 131 ~~~~~~~ta~~al~~~~-~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (310)
..||+.......++..+ .-.|.+|+|.|.+..+|.-...++... ++.|+++-..-.. +.
T Consensus 139 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~-~aTVt~chs~T~~-------------------l~ 198 (294)
T PRK14187 139 LIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGE-NCTVTTVHSATRD-------------------LA 198 (294)
T ss_pred ccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhC-CCEEEEeCCCCCC-------------------HH
Confidence 45666555555555443 457999999999999999988888874 8888766543222 22
Q ss_pred ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628 210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~ 245 (310)
+..+.+|+++.++|..+ -.-++++++..++.+|...
T Consensus 199 ~~~~~ADIvVsAvGkp~~i~~~~ik~gaiVIDVGin~ 235 (294)
T PRK14187 199 DYCSKADILVAAVGIPNFVKYSWIKKGAIVIDVGINS 235 (294)
T ss_pred HHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccc
Confidence 23457899999999542 2346778899999998543
No 476
>PRK07102 short chain dehydrogenase; Provisional
Probab=91.77 E-value=0.42 Score=40.09 Aligned_cols=40 Identities=23% Similarity=0.353 Sum_probs=33.5
Q ss_pred CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
.+++|+|++|.+|...+..+... |.+|+++++++++.+..
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~ 41 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAA-GARLYLAARDVERLERL 41 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHH
Confidence 57999999999999988877774 99999999988766543
No 477
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.75 E-value=2 Score=37.12 Aligned_cols=95 Identities=22% Similarity=0.221 Sum_probs=66.4
Q ss_pred cccchHHHHHHHHHhcc-cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628 131 SLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (310)
Q Consensus 131 ~~~~~~~ta~~al~~~~-~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (310)
..||.....+..++... .-.|.+|+|.|.+..+|.-...++... ++.|+++-+... ++.
T Consensus 137 ~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~-~ATVt~chs~T~-------------------dl~ 196 (282)
T PRK14180 137 LESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-KATVTTCHRFTT-------------------DLK 196 (282)
T ss_pred cCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEEEEcCCCC-------------------CHH
Confidence 45766555555555443 346999999999999999988888874 888877654322 222
Q ss_pred ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628 210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~ 245 (310)
+..+.+|+++.++|..+ -.-++++++..++.+|...
T Consensus 197 ~~~k~ADIvIsAvGkp~~i~~~~vk~gavVIDvGin~ 233 (282)
T PRK14180 197 SHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINH 233 (282)
T ss_pred HHhhhcCEEEEccCCcCcCCHHHcCCCcEEEEecccc
Confidence 23467899999999532 2236788999999998543
No 478
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=91.75 E-value=1.1 Score=43.02 Aligned_cols=71 Identities=20% Similarity=0.274 Sum_probs=52.7
Q ss_pred CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEee-CCCCcc-c-ccCCCccEEEeCCCC
Q 021628 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAID-YTKENI-E-DLPEKFDVVFDAVGQ 224 (310)
Q Consensus 152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~-~~~~~~-~-~~~~~~dvvi~~~g~ 224 (310)
++++|.| .|.+|+..++.++.. |.++++++.++++.+.+++.+...+.. ..++.. . ...+.+|.++-+.++
T Consensus 418 ~hiiI~G-~G~~G~~la~~L~~~-g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~~ 491 (558)
T PRK10669 418 NHALLVG-YGRVGSLLGEKLLAA-GIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLTIPN 491 (558)
T ss_pred CCEEEEC-CChHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcCC
Confidence 7899999 999999999988884 899999999999999998887654442 222211 1 123478888777653
No 479
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=91.71 E-value=0.42 Score=40.30 Aligned_cols=41 Identities=29% Similarity=0.392 Sum_probs=34.0
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
+.+++|+|++|.+|...+..+... |.+|+++++++++.+.+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~-g~~v~~~~r~~~~~~~~ 41 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAA-GANVVVNDLGEAGAEAA 41 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 357999999999999988777664 89999999988776555
No 480
>PLN00198 anthocyanidin reductase; Provisional
Probab=91.71 E-value=0.56 Score=41.65 Aligned_cols=73 Identities=22% Similarity=0.312 Sum_probs=46.0
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH---HHc---CCCEEeeCC--CC-cccccCCCccEEEe
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL---RSL---GADLAIDYT--KE-NIEDLPEKFDVVFD 220 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~---~~~---g~~~~~~~~--~~-~~~~~~~~~dvvi~ 220 (310)
.+.+|+|+|++|-+|...+..+... |.+|++++++.++.... ..+ +.-.++..+ +. ......+++|.||+
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 86 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQK-GYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFH 86 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHC-CCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEE
Confidence 3678999999999999988877774 89998888765443222 112 111222222 11 12222347899998
Q ss_pred CCC
Q 021628 221 AVG 223 (310)
Q Consensus 221 ~~g 223 (310)
+++
T Consensus 87 ~A~ 89 (338)
T PLN00198 87 VAT 89 (338)
T ss_pred eCC
Confidence 875
No 481
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.70 E-value=1.5 Score=38.00 Aligned_cols=95 Identities=18% Similarity=0.203 Sum_probs=65.7
Q ss_pred cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (310)
Q Consensus 131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (310)
..||.....+..++..++ -.|.+|+|.|.+..+|.-..+++... ++.|+++-+.-. ++.
T Consensus 138 ~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~-~ATVtichs~T~-------------------~L~ 197 (288)
T PRK14171 138 FIPCTALGCLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKE-NCSVTICHSKTH-------------------NLS 197 (288)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEEEeCCCCC-------------------CHH
Confidence 456665444444554443 57999999999999999988888874 887776643222 223
Q ss_pred ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628 210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV 245 (310)
Q Consensus 210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~ 245 (310)
+..+.+|+++.++|... -.-+++++|..++.+|...
T Consensus 198 ~~~~~ADIvV~AvGkp~~i~~~~vk~GavVIDvGin~ 234 (288)
T PRK14171 198 SITSKADIVVAAIGSPLKLTAEYFNPESIVIDVGINR 234 (288)
T ss_pred HHHhhCCEEEEccCCCCccCHHHcCCCCEEEEeeccc
Confidence 33457899999999542 2346788999999998543
No 482
>PRK12937 short chain dehydrogenase; Provisional
Probab=91.65 E-value=1.1 Score=37.58 Aligned_cols=35 Identities=17% Similarity=0.294 Sum_probs=29.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS 185 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~ 185 (310)
.+.+++|+|++|.+|...+..+... |.+++++.++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~-g~~v~~~~~~ 38 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAAD-GFAVAVNYAG 38 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCC
Confidence 5679999999999999988877774 8988877664
No 483
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=91.62 E-value=0.82 Score=41.17 Aligned_cols=89 Identities=24% Similarity=0.307 Sum_probs=58.0
Q ss_pred CEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEe--cChhhHHH-HHHcCCCEEeeCCCCcc-------c-----------
Q 021628 152 KSILVLGGAGGVGTMVIQLAKHVF-GASKVAAT--SSTAKLDL-LRSLGADLAIDYTKENI-------E----------- 209 (310)
Q Consensus 152 ~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~--~~~~~~~~-~~~~g~~~~~~~~~~~~-------~----------- 209 (310)
.+|.|+|++|++|..++...+... ..++++++ ++.+++.. ++++++.++.-.+.... .
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~ 81 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE 81 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence 579999999999999999877532 35777665 45555444 47788877654332110 0
Q ss_pred ---cc--CCCccEEEeCCC---ChHHHHhhcccCCEEEE
Q 021628 210 ---DL--PEKFDVVFDAVG---QCDKALKAVKEGGRVVS 240 (310)
Q Consensus 210 ---~~--~~~~dvvi~~~g---~~~~~~~~l~~~G~~v~ 240 (310)
+. ...+|+|+++.+ .+..++..+..|-++.+
T Consensus 82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL 120 (385)
T PRK05447 82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL 120 (385)
T ss_pred HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence 00 125899999964 35677788876666554
No 484
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=91.61 E-value=0.48 Score=41.69 Aligned_cols=43 Identities=26% Similarity=0.269 Sum_probs=36.5
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
-.|.+++|+|+++++|..++.-+... |++|+...|+.++.+.+
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~-Ga~Vv~~~R~~~~~~~~ 75 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALR-GAHVVLACRNEERGEEA 75 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhC-CCEEEEEeCCHHHHHHH
Confidence 45689999999999999988877774 89999999998776665
No 485
>PRK07589 ornithine cyclodeaminase; Validated
Probab=91.57 E-value=1 Score=40.26 Aligned_cols=92 Identities=14% Similarity=0.191 Sum_probs=61.1
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHcC---CCEEeeCCCCcccccCCCccEEEeCCC
Q 021628 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLG---ADLAIDYTKENIEDLPEKFDVVFDAVG 223 (310)
Q Consensus 149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~g---~~~~~~~~~~~~~~~~~~~dvvi~~~g 223 (310)
+.-.++.|+| +|.-+.+.++.+...+.. +|.+..+++++.+.+ +++. ..... ..+..+..+++|+|+.|++
T Consensus 127 ~da~~l~iiG-aG~QA~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~~~~v~~---~~~~~~av~~ADIIvtaT~ 202 (346)
T PRK07589 127 PDSRTMALIG-NGAQSEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGPGLRIVA---CRSVAEAVEGADIITTVTA 202 (346)
T ss_pred CCCcEEEEEC-CcHHHHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhcCCcEEE---eCCHHHHHhcCCEEEEecC
Confidence 4557899999 999998887765554454 677888998886554 3332 22211 1123344568999999886
Q ss_pred ChH----HHHhhcccCCEEEEEeCC
Q 021628 224 QCD----KALKAVKEGGRVVSIIGS 244 (310)
Q Consensus 224 ~~~----~~~~~l~~~G~~v~~g~~ 244 (310)
+.. --.+++++|-.+..+|.+
T Consensus 203 S~~~~Pvl~~~~lkpG~hV~aIGs~ 227 (346)
T PRK07589 203 DKTNATILTDDMVEPGMHINAVGGD 227 (346)
T ss_pred CCCCCceecHHHcCCCcEEEecCCC
Confidence 422 223688999888888854
No 486
>PLN00016 RNA-binding protein; Provisional
Probab=91.51 E-value=0.88 Score=41.20 Aligned_cols=91 Identities=19% Similarity=0.234 Sum_probs=56.6
Q ss_pred CCCEEEEE----cCCcchHHHHHHHHHhhcCCcEEEEecChhhHHH-----------HHHcCCCEEeeCCCCccccc--C
Q 021628 150 AGKSILVL----GGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL-----------LRSLGADLAIDYTKENIEDL--P 212 (310)
Q Consensus 150 ~g~~vlI~----g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~-----------~~~~g~~~~~~~~~~~~~~~--~ 212 (310)
...+|+|+ |++|.+|...+..+... |.+|++++++++.... +...+...+. .+-.+.... .
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-~D~~d~~~~~~~ 128 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKA-GHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-GDPADVKSKVAG 128 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHC-CCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-ecHHHHHhhhcc
Confidence 34689999 99999999988877774 8999999987654321 1122333221 111112221 2
Q ss_pred CCccEEEeCCCC----hHHHHhhcccC--CEEEEEe
Q 021628 213 EKFDVVFDAVGQ----CDKALKAVKEG--GRVVSII 242 (310)
Q Consensus 213 ~~~dvvi~~~g~----~~~~~~~l~~~--G~~v~~g 242 (310)
.++|+||++.+. ....++.+... .+|+.++
T Consensus 129 ~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~S 164 (378)
T PLN00016 129 AGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCS 164 (378)
T ss_pred CCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEc
Confidence 479999999762 24555555433 4788765
No 487
>PRK14901 16S rRNA methyltransferase B; Provisional
Probab=91.49 E-value=3.7 Score=38.05 Aligned_cols=95 Identities=21% Similarity=0.244 Sum_probs=57.7
Q ss_pred hcccCCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHH----HcCCCE--EeeCCCCccc----ccCC
Q 021628 145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLR----SLGADL--AIDYTKENIE----DLPE 213 (310)
Q Consensus 145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~----~~~~ 213 (310)
...+++|++|+=.| .+.|.-+..+++.+.+ .++++++.++++++.++ .+|.+. ++..+..... ...+
T Consensus 247 ~l~~~~g~~VLDl~--ag~G~kt~~la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~ 324 (434)
T PRK14901 247 LLDPQPGEVILDAC--AAPGGKTTHIAELMGDQGEIWAVDRSASRLKKLQENAQRLGLKSIKILAADSRNLLELKPQWRG 324 (434)
T ss_pred HhCCCCcCEEEEeC--CCCchhHHHHHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeCChhhcccccccccc
Confidence 45678899887776 3345455555655422 47889999999887774 466543 2222222222 1124
Q ss_pred CccEEE-e--CCC--C--------------------------hHHHHhhcccCCEEEEE
Q 021628 214 KFDVVF-D--AVG--Q--------------------------CDKALKAVKEGGRVVSI 241 (310)
Q Consensus 214 ~~dvvi-~--~~g--~--------------------------~~~~~~~l~~~G~~v~~ 241 (310)
.||.|+ | |+| . +..+++.|++||+++..
T Consensus 325 ~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpgG~lvys 383 (434)
T PRK14901 325 YFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPGGTLVYA 383 (434)
T ss_pred cCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 689887 3 343 1 24667888999998744
No 488
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=91.49 E-value=2.7 Score=38.01 Aligned_cols=45 Identities=29% Similarity=0.371 Sum_probs=37.2
Q ss_pred HHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628 141 EGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA 187 (310)
Q Consensus 141 ~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~ 187 (310)
.+++.... -.|.+|.|.| .|.+|..+++.+... |+++++++.+..
T Consensus 196 ~a~~~~g~~l~G~rVaVQG-~GNVg~~aa~~l~~~-GAkvva~sds~g 241 (411)
T COG0334 196 EALKALGDDLEGARVAVQG-FGNVGQYAAEKLHEL-GAKVVAVSDSKG 241 (411)
T ss_pred HHHHHcCCCcCCCEEEEEC-ccHHHHHHHHHHHHc-CCEEEEEEcCCC
Confidence 34444333 4899999999 999999999999986 999999988766
No 489
>PLN02214 cinnamoyl-CoA reductase
Probab=91.47 E-value=0.7 Score=41.21 Aligned_cols=73 Identities=19% Similarity=0.306 Sum_probs=46.7
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHH--HHHHcC---CC-EEeeCC--C-CcccccCCCccEEEe
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD--LLRSLG---AD-LAIDYT--K-ENIEDLPEKFDVVFD 220 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~--~~~~~g---~~-~~~~~~--~-~~~~~~~~~~dvvi~ 220 (310)
.+.+|+|+|++|.+|...+..+... |.+|++++++.++.. .++.+. .. .++..+ + ..+.....++|+||.
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 87 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLER-GYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH 87 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence 5678999999999999988877774 999999988765421 122221 11 122221 1 112222357999999
Q ss_pred CCC
Q 021628 221 AVG 223 (310)
Q Consensus 221 ~~g 223 (310)
+++
T Consensus 88 ~A~ 90 (342)
T PLN02214 88 TAS 90 (342)
T ss_pred ecC
Confidence 976
No 490
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=91.47 E-value=0.46 Score=40.29 Aligned_cols=35 Identities=29% Similarity=0.415 Sum_probs=30.7
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS 185 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~ 185 (310)
.+.+++|+|+++.+|.+.++.+... |++|+++.++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~-G~~v~~~~~~ 48 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKA-GADIIITTHG 48 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCC
Confidence 5789999999999999988877774 9999999887
No 491
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=91.45 E-value=1 Score=36.45 Aligned_cols=71 Identities=25% Similarity=0.374 Sum_probs=46.6
Q ss_pred CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh-hHHHHHHcCC--CEE-eeCC--C-Ccccc-------cCCCccE
Q 021628 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGA--DLA-IDYT--K-ENIED-------LPEKFDV 217 (310)
Q Consensus 152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~-~~~~~~~~g~--~~~-~~~~--~-~~~~~-------~~~~~dv 217 (310)
...+++|+.+++|.+..+.+... |+++.+.+.+.+ ..+.+++++. ++. +..+ + .+... .....++
T Consensus 15 k~~~vtGg~sGIGrAia~~la~~-Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv 93 (256)
T KOG1200|consen 15 KVAAVTGGSSGIGRAIAQLLAKK-GARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV 93 (256)
T ss_pred ceeEEecCCchHHHHHHHHHHhc-CcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence 45689999999999988877774 999999988554 4455577774 333 2111 1 11110 1236789
Q ss_pred EEeCCC
Q 021628 218 VFDAVG 223 (310)
Q Consensus 218 vi~~~g 223 (310)
+++|+|
T Consensus 94 lVncAG 99 (256)
T KOG1200|consen 94 LVNCAG 99 (256)
T ss_pred EEEcCc
Confidence 999988
No 492
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=91.44 E-value=0.37 Score=37.72 Aligned_cols=80 Identities=19% Similarity=0.273 Sum_probs=50.0
Q ss_pred EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC------CEEeeCC---CCcccccCCCccEEEeCCC
Q 021628 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA------DLAIDYT---KENIEDLPEKFDVVFDAVG 223 (310)
Q Consensus 153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~------~~~~~~~---~~~~~~~~~~~dvvi~~~g 223 (310)
+|.|+| +|..|.+.+..+.. .|.+|.+..++++..+.+++-+. +..+... ..+..+..+++|+++-+++
T Consensus 1 KI~ViG-aG~~G~AlA~~la~-~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavP 78 (157)
T PF01210_consen 1 KIAVIG-AGNWGTALAALLAD-NGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVP 78 (157)
T ss_dssp EEEEES-SSHHHHHHHHHHHH-CTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-
T ss_pred CEEEEC-cCHHHHHHHHHHHH-cCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEeccc
Confidence 588999 99999998888877 48899999999988888865321 1111110 1122233468899999987
Q ss_pred C--hHHHHhhccc
Q 021628 224 Q--CDKALKAVKE 234 (310)
Q Consensus 224 ~--~~~~~~~l~~ 234 (310)
+ .+..++.+++
T Consensus 79 s~~~~~~~~~l~~ 91 (157)
T PF01210_consen 79 SQAHREVLEQLAP 91 (157)
T ss_dssp GGGHHHHHHHHTT
T ss_pred HHHHHHHHHHHhh
Confidence 4 2444444443
No 493
>PRK14904 16S rRNA methyltransferase B; Provisional
Probab=91.40 E-value=4.1 Score=37.83 Aligned_cols=95 Identities=22% Similarity=0.250 Sum_probs=56.9
Q ss_pred HhcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHH----HcCCCEE--eeCCCCcccccCCCcc
Q 021628 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR----SLGADLA--IDYTKENIEDLPEKFD 216 (310)
Q Consensus 144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~----~~g~~~~--~~~~~~~~~~~~~~~d 216 (310)
....+.+|++||=.|+ | .|..+..+++.+. +.++++++.++++++.++ +.|.+.+ +..+...+. ....+|
T Consensus 244 ~~l~~~~g~~VLDlga-G-~G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~v~~~~~Da~~~~-~~~~fD 320 (445)
T PRK14904 244 LLLNPQPGSTVLDLCA-A-PGGKSTFMAELMQNRGQITAVDRYPQKLEKIRSHASALGITIIETIEGDARSFS-PEEQPD 320 (445)
T ss_pred HhcCCCCCCEEEEECC-C-CCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhCCCeEEEEeCcccccc-cCCCCC
Confidence 4556788999888873 2 3434444444321 348999999999987764 4565432 222222211 123689
Q ss_pred EEEe---CCCC----------------------------hHHHHhhcccCCEEEEE
Q 021628 217 VVFD---AVGQ----------------------------CDKALKAVKEGGRVVSI 241 (310)
Q Consensus 217 vvi~---~~g~----------------------------~~~~~~~l~~~G~~v~~ 241 (310)
.|+- |+|. +..+++.|++||+++..
T Consensus 321 ~Vl~D~Pcsg~g~~~r~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvys 376 (445)
T PRK14904 321 AILLDAPCTGTGVLGRRAELRWKLTPEKLAELVGLQAELLDHAASLLKPGGVLVYA 376 (445)
T ss_pred EEEEcCCCCCcchhhcCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 8873 3331 24667788999999865
No 494
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=91.40 E-value=4.9 Score=32.86 Aligned_cols=110 Identities=12% Similarity=0.032 Sum_probs=69.0
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC--EEeeCCC-Cccc--ccCCCccEEEe
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTK-ENIE--DLPEKFDVVFD 220 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~-~~~~--~~~~~~dvvi~ 220 (310)
++++|+-+| +| .|..+..+++...+.+++.++.+++..+.+++ .+.. .++..+. +.+. .....+|.|+-
T Consensus 40 ~~~~VLDiG-cG-tG~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~D~V~~ 117 (202)
T PRK00121 40 DAPIHLEIG-FG-KGEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLCGDAVEVLLDMFPDGSLDRIYL 117 (202)
T ss_pred CCCeEEEEc-cC-CCHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEecCHHHHHHHHcCccccceEEE
Confidence 678898888 44 47777788776434689999999998877743 2322 2233322 2222 11345888875
Q ss_pred CCC-----------------ChHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628 221 AVG-----------------QCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK 274 (310)
Q Consensus 221 ~~g-----------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (310)
... -++.+.+.|+|+|.++... .....+.++++.+.+..+.
T Consensus 118 ~~~~p~~~~~~~~~~~~~~~~l~~i~~~LkpgG~l~i~~-------------~~~~~~~~~~~~~~~~g~~ 175 (202)
T PRK00121 118 NFPDPWPKKRHHKRRLVQPEFLALYARKLKPGGEIHFAT-------------DWEGYAEYMLEVLSAEGGF 175 (202)
T ss_pred ECCCCCCCccccccccCCHHHHHHHHHHcCCCCEEEEEc-------------CCHHHHHHHHHHHHhCccc
Confidence 321 1367788999999998653 2345566677777665543
No 495
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=91.38 E-value=0.51 Score=42.12 Aligned_cols=71 Identities=21% Similarity=0.134 Sum_probs=43.4
Q ss_pred EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCC----CcccccCCCccEEEeCCC
Q 021628 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK----ENIEDLPEKFDVVFDAVG 223 (310)
Q Consensus 153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~dvvi~~~g 223 (310)
+|+|+|++|-+|...+..+....+.+|++++++.++...+.....-.++..+- +.+....+++|+||++++
T Consensus 3 ~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa 77 (347)
T PRK11908 3 KVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVA 77 (347)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcc
Confidence 69999999999999888766533688999988765543332111111222211 112223357999998754
No 496
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=91.37 E-value=0.72 Score=43.20 Aligned_cols=68 Identities=15% Similarity=0.338 Sum_probs=47.0
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVG 223 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g 223 (310)
.+.+++|+| +|++|.+++..+... |+++++..+++++.+.+ ++++.. .+... +... ...+|+||+|++
T Consensus 331 ~~k~vlIiG-aGgiG~aia~~L~~~-G~~V~i~~R~~~~~~~la~~~~~~-~~~~~--~~~~-l~~~DiVInatP 399 (477)
T PRK09310 331 NNQHVAIVG-AGGAAKAIATTLARA-GAELLIFNRTKAHAEALASRCQGK-AFPLE--SLPE-LHRIDIIINCLP 399 (477)
T ss_pred CCCEEEEEc-CcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhccc-eechh--Hhcc-cCCCCEEEEcCC
Confidence 567899999 799999988877775 88888888888877655 333321 11111 1111 247899999986
No 497
>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional
Probab=91.31 E-value=1.3 Score=37.62 Aligned_cols=92 Identities=20% Similarity=0.234 Sum_probs=58.6
Q ss_pred cCCCCEEEEEcCCcchHHHHHHHHHhh--cCCcEEEEecChhhHHHHHH----cCCC---EEeeCCCCcccccCCCccEE
Q 021628 148 FSAGKSILVLGGAGGVGTMVIQLAKHV--FGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIEDLPEKFDVV 218 (310)
Q Consensus 148 ~~~g~~vlI~g~~g~~G~~a~~la~~~--~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~dvv 218 (310)
+.++.+||-+| +|. |..+..+++.. .+.+++.++.+++-++.+++ .+.. .++..+-.+.. ...+|++
T Consensus 54 ~~~~~~vLDlG-cGt-G~~~~~l~~~~~~~~~~v~gvD~S~~ml~~A~~~~~~~~~~~~v~~~~~d~~~~~--~~~~D~v 129 (247)
T PRK15451 54 VQPGTQVYDLG-CSL-GAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA--IENASMV 129 (247)
T ss_pred CCCCCEEEEEc-ccC-CHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEeCChhhCC--CCCCCEE
Confidence 56889999998 443 66666676631 26789999999998877754 2221 12222211111 1357887
Q ss_pred EeCCC-----------ChHHHHhhcccCCEEEEEeC
Q 021628 219 FDAVG-----------QCDKALKAVKEGGRVVSIIG 243 (310)
Q Consensus 219 i~~~g-----------~~~~~~~~l~~~G~~v~~g~ 243 (310)
+.+.. .+++..+.|+|||.++....
T Consensus 130 v~~~~l~~l~~~~~~~~l~~i~~~LkpGG~l~l~e~ 165 (247)
T PRK15451 130 VLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK 165 (247)
T ss_pred ehhhHHHhCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 75432 13688889999999998763
No 498
>PRK07074 short chain dehydrogenase; Provisional
Probab=91.20 E-value=0.57 Score=39.63 Aligned_cols=41 Identities=27% Similarity=0.396 Sum_probs=34.1
Q ss_pred CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
+.+++|+|++|.+|...+..+... |++++++++++++.+.+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~-g~~v~~~~r~~~~~~~~ 42 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAA-GDRVLALDIDAAALAAF 42 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 468999999999999988776664 89999999988776555
No 499
>PRK07832 short chain dehydrogenase; Provisional
Probab=91.14 E-value=0.52 Score=40.37 Aligned_cols=39 Identities=21% Similarity=0.228 Sum_probs=32.2
Q ss_pred EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (310)
Q Consensus 153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~ 192 (310)
+++|+|++|++|...++.+... |++|+++.+++++++.+
T Consensus 2 ~vlItGas~giG~~la~~la~~-G~~vv~~~r~~~~~~~~ 40 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQ-GAELFLTDRDADGLAQT 40 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 6899999999999988877774 99999988887765443
No 500
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=91.14 E-value=0.82 Score=38.34 Aligned_cols=34 Identities=32% Similarity=0.465 Sum_probs=27.9
Q ss_pred CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec
Q 021628 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS 184 (310)
Q Consensus 150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~ 184 (310)
.+.+++|+|++|.+|...++.+... |+++++..+
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~-G~~vv~~~~ 35 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKD-GFKVVAGCG 35 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHc-CCEEEEEcC
Confidence 3678999999999999988877775 998887543
Done!