Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>021632
MKKLVISGSSEEENVGDTFAERAEWYYQKRPQLLALLKDLYNGYITLLDRCRNHKKHHFR
NGSSETIITASSSADAESDAESTISYQQQQITTTTATMAAAAASANIDDLVAELVAKNVE
SEILVNQVNEMDHVCNESRRKIELLKSLMELLESERMILVNENVKLGYQVSAVMEENKGL
ASEAMFMRRKASELAKCVLRMREDYRVCILSQKIEDLQEQIYGLEKRNKEYYQMLVNREQ
QVKEYENSWSNSNSTSSSSSYVKEKSAQVTLESCFQSFEKIKLKKKKGSSNWWERVKKAD
FFNCGLPSCS

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  021632
        (310 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504956328 - symbol:AT1G48405 "AT1G48405" speci...   277  3.3e-24   1
TAIR|locus:2041203 - symbol:NET2D "AT2G22560" species:370...   101  0.00084   2


>TAIR|locus:504956328 [details] [associations]
            symbol:AT1G48405 "AT1G48405" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GO:GO:0016301 EMBL:AC007932
            InterPro:IPR011684 Pfam:PF07765 EMBL:AY649293 IPI:IPI00532463
            PIR:C96524 RefSeq:NP_683409.1 UniGene:At.50791
            EnsemblPlants:AT1G48405.1 GeneID:841261 KEGG:ath:AT1G48405
            TAIR:At1g48405 InParanoid:Q9SX73 OMA:LNTINPF PhylomeDB:Q9SX73
            ProtClustDB:CLSN2690447 Genevestigator:Q9SX73 Uniprot:Q9SX73
        Length = 297

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 69/239 (28%), Positives = 122/239 (51%)

Query:    11 EEENVGDTFAERAEWYYQKRPQLLALLKDLYNGYITLLDRCRNHKKHHFRNGXXXXXXXX 70
             ++   G+TF++RAEW+YQ+ P LL+L +DLY+GY TLLDR   + K    +         
Sbjct:    30 DDNQTGETFSQRAEWFYQRSPLLLSLCQDLYDGYATLLDRFNQNPKQVIPHDNDTDTDIT 89

Query:    71 XXXXXXXXXXXXXXXYQQQQIXXXXXXXXXXXXXXNIDDLVAELVAKNVESEILVNQVNE 130
                            +QQ ++              NI+DLV++LV  N+E +   + +  
Sbjct:    90 SEVESILS-------FQQMEVSTCDMQK-------NIEDLVSQLVTANLEKDTAKHILQR 135

Query:   131 MDHVCNESRRXXXXXXXXXXXXXXXXXXXVNENVKLGYQVSAVMEENKGLASEAMFMRRK 190
              +    E+ +                   V E   LG+++++++EEN+ LASEA+FM+ +
Sbjct:   136 REQTLQEACKTIGLLKKLVMLLDMEKEVAVEETANLGHKLTSLLEENRELASEALFMKNE 195

Query:   191 ASELAKCVLRMREDY--RVCILSQKIEDLQ---EQIYGLEKRNKEYYQMLVNREQQVKE 244
             A +LA+CVL+MR+++  ++C L  +I +LQ   E +Y  E  + +    L N +++ K+
Sbjct:   196 AVKLARCVLKMRDEHFHKMCHLQNQIYELQSSREPVY--ENESSQSCFGLENSKKKSKK 252


>TAIR|locus:2041203 [details] [associations]
            symbol:NET2D "AT2G22560" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] GO:GO:0005886 EMBL:CP002685 GO:GO:0016301
            InterPro:IPR011684 Pfam:PF07765 IPI:IPI00537061 RefSeq:NP_179842.2
            UniGene:At.39420 ProteinModelPortal:F4IJK1 SMR:F4IJK1 PRIDE:F4IJK1
            EnsemblPlants:AT2G22560.1 GeneID:816788 KEGG:ath:AT2G22560
            OMA:AGLDHIT ArrayExpress:F4IJK1 Uniprot:F4IJK1
        Length = 947

 Score = 101 (40.6 bits), Expect = 0.00084, Sum P(2) = 0.00084
 Identities = 17/35 (48%), Positives = 27/35 (77%)

Query:    16 GDTFAERAEWYYQKRPQLLALLKDLYNGYITLLDR 50
             GD+FA+RAE YY+KRP+L++ +++ Y  Y  L +R
Sbjct:    48 GDSFAKRAEMYYKKRPELISFVEESYRAYRALAER 82

 Score = 57 (25.1 bits), Expect = 0.00084, Sum P(2) = 0.00084
 Identities = 21/84 (25%), Positives = 39/84 (46%)

Query:   162 ENVKLGYQV--SAVMEENKGLASEAMFMRRKASELAKCVLRMREDYRVCILSQKIEDLQE 219
             E VK  Y++  S   E  KG+  +   +     E  + V    E+ R  +    I+  QE
Sbjct:   198 EFVKSSYEIGLSKYWEFEKGIKEKQERICGLQDEFGESVAIEDEEARRLMTETAIKSCQE 257

Query:   220 QIYGLEKRNKEYYQMLVNREQQVK 243
             ++  L+++ ++ Y+    RE+ VK
Sbjct:   258 KLVELQEKQEKSYEEA--REEHVK 279


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.131   0.378    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      310       232   0.00085  113 3  11 22  0.42    33
                                                     32  0.42    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  191 KB (2109 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.53u 0.09s 18.62t   Elapsed:  00:00:02
  Total cpu time:  18.53u 0.09s 18.62t   Elapsed:  00:00:02
  Start:  Fri May 10 04:19:10 2013   End:  Fri May 10 04:19:12 2013

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