BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 021632
         (310 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|B4N1C2|HOOK_DROWI Protein hook OS=Drosophila willistoni GN=hk PE=3 SV=2
          Length = 692

 Score = 33.1 bits (74), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 35/134 (26%)

Query: 136 NESRRKIELLKSLMELLESERMILVNENVKLGYQVSAVMEENKGLASEAMFMRRKASELA 195
           NE RR+++LLK   ELL+SE      E++KL     AV +E     S+ + M+++  EL 
Sbjct: 260 NEMRRQLDLLKE--ELLQSEG---AREDLKL----KAVQQE-----SDLVHMQQRIDELL 305

Query: 196 KC------------VLRMRED-YRVC-----ILSQKIED---LQEQIYGLEKRNKEYYQM 234
           K             VLR   D  ++C        +K+ED   L++QI  LE+R+ +Y Q 
Sbjct: 306 KSSAEVTTLKDEVDVLRESNDKLKICEAQLDTYKKKLEDYNDLKKQIKILEERSADYVQQ 365

Query: 235 LVNREQQVKEYENS 248
               E   K Y N+
Sbjct: 366 NAQFEDDAKRYANT 379


>sp|Q5R9K7|KIF5A_PONAB Kinesin heavy chain isoform 5A OS=Pongo abelii GN=KIF5A PE=2 SV=1
          Length = 1032

 Score = 31.2 bits (69), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 3/95 (3%)

Query: 110 LVAELVAKNVESEILVNQVNEMDHVCNESRRKI-ELLKSLMELLESERMILVNENVKLGY 168
           LV EL  K      L +++  +  V    R++I E+L  LM+ L    +I+ N  +KL  
Sbjct: 515 LVDELSQKVATMLSLESELQRLQEVSGHQRKRIAEVLNGLMKDLSEFSVIVGNGEIKLPV 574

Query: 169 QVSAVMEENKGLASEAMFMRRKASELAKCVLRMRE 203
           ++S  +EE   +A   +++ +  SE+   V R R+
Sbjct: 575 EISGAIEEEFTVAR--LYISKIKSEVKSVVKRCRQ 607


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.312    0.124    0.340 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,986,926
Number of Sequences: 539616
Number of extensions: 3588248
Number of successful extensions: 17659
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 420
Number of HSP's that attempted gapping in prelim test: 17136
Number of HSP's gapped (non-prelim): 899
length of query: 310
length of database: 191,569,459
effective HSP length: 117
effective length of query: 193
effective length of database: 128,434,387
effective search space: 24787836691
effective search space used: 24787836691
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)