Your job contains 1 sequence.
>021633
MMGLTSLQVCMDSSDWLQGSIHEESGLDSSSPSGDMLTCSRPLMERRLRPPHDQALKCPR
CDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSSKKSNDQS
MNQNPGSSSHNPTDLQLSFPEMQFSHLGNILGAHGTLANNHNFMDNKYSAMLENPRPIDF
MENKLEAIVGSSRNYDFMGNNGDMGMVGGLGNLSHHHQEGLTPNVHNLCSPFGMSLDGTG
GTFIDGCQRIMLPYDANEVQNAIDVKPNAKLLSLDWQDQSCSDVGYLGNLGSSWSGMMNG
YGSSTTNSLV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021633
(310 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2170753 - symbol:HCA2 "HIGH CAMBIAL ACTIVITY2"... 447 3.3e-61 3
TAIR|locus:2144030 - symbol:TMO6 "TARGET OF MONOPTEROS 6"... 319 1.4e-31 2
TAIR|locus:2040746 - symbol:DOF2.4 "DNA binding with one ... 295 6.1e-31 2
TAIR|locus:2134981 - symbol:AT4G24060 species:3702 "Arabi... 297 2.0e-30 2
TAIR|locus:2053175 - symbol:AT2G28810 species:3702 "Arabi... 298 2.3e-29 2
TAIR|locus:2181773 - symbol:AT5G02460 species:3702 "Arabi... 279 6.6e-28 2
TAIR|locus:2056588 - symbol:AT2G28510 species:3702 "Arabi... 284 1.7e-27 2
TAIR|locus:2085697 - symbol:DOF6 "DOF transcription facto... 305 3.5e-27 1
TAIR|locus:2019499 - symbol:AT1G64620 species:3702 "Arabi... 303 5.7e-27 1
TAIR|locus:2026595 - symbol:OBP2 species:3702 "Arabidopsi... 279 5.8e-27 2
TAIR|locus:2039959 - symbol:DAG2 "DOF AFFECTING GERMINATI... 268 3.1e-26 2
TAIR|locus:2032153 - symbol:AT1G28310 species:3702 "Arabi... 287 2.9e-25 1
TAIR|locus:2155755 - symbol:AT5G65590 species:3702 "Arabi... 284 5.9e-25 1
TAIR|locus:2159275 - symbol:OBP4 "OBF binding protein 4" ... 283 7.6e-25 1
TAIR|locus:505006172 - symbol:AT1G47655 species:3702 "Ara... 282 9.7e-25 1
TAIR|locus:2094746 - symbol:DOF2 "DOF zinc finger protein... 276 4.2e-24 1
TAIR|locus:2017567 - symbol:DOF1 "DOF zinc finger protein... 275 5.3e-24 1
TAIR|locus:2079492 - symbol:DAG1 "dof affecting germinati... 274 6.8e-24 1
TAIR|locus:2027027 - symbol:AT1G21340 species:3702 "Arabi... 270 1.8e-23 1
TAIR|locus:2079954 - symbol:AT3G52440 species:3702 "Arabi... 267 3.8e-23 1
TAIR|locus:2134658 - symbol:AT4G00940 species:3702 "Arabi... 265 6.1e-23 1
TAIR|locus:2074850 - symbol:OBP1 "OBF binding protein 1" ... 264 7.8e-23 1
TAIR|locus:2121041 - symbol:DOF4.7 "DNA binding with one ... 261 1.6e-22 1
TAIR|locus:2133079 - symbol:DOF4.4 "DNA-binding with One ... 259 2.6e-22 1
TAIR|locus:2158078 - symbol:AT5G66940 species:3702 "Arabi... 251 1.9e-21 1
TAIR|locus:2133064 - symbol:DOF4.3 "AT4G21040" species:37... 244 1.0e-20 1
TAIR|locus:2164860 - symbol:CDF2 "cycling DOF factor 2" s... 248 1.4e-20 1
TAIR|locus:2127353 - symbol:DOF4.5 "DNA-binding with One ... 240 2.7e-20 1
TAIR|locus:2154079 - symbol:CDF1 "AT5G62430" species:3702... 240 2.7e-20 1
TAIR|locus:2007151 - symbol:AT1G69570 species:3702 "Arabi... 240 6.0e-20 1
TAIR|locus:2079152 - symbol:CDF3 "cycling DOF factor 3" s... 234 4.6e-19 1
TAIR|locus:2030006 - symbol:AT1G29160 species:3702 "Arabi... 228 5.1e-19 1
TAIR|locus:2055506 - symbol:AT2G34140 species:3702 "Arabi... 225 1.1e-18 1
TAIR|locus:2133149 - symbol:ATDOF4.2 "AT4G21030" species:... 174 3.9e-13 1
>TAIR|locus:2170753 [details] [associations]
symbol:HCA2 "HIGH CAMBIAL ACTIVITY2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0010067 "procambium histogenesis" evidence=IMP] [GO:0010087
"phloem or xylem histogenesis" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0010087
EMBL:AB009053 GO:GO:0010067 HOGENOM:HOG000239394 EMBL:BT020467
EMBL:BT020576 IPI:IPI00528642 RefSeq:NP_201099.1 UniGene:At.29026
EnsemblPlants:AT5G62940.1 GeneID:836414 KEGG:ath:AT5G62940
GeneFarm:4478 TAIR:At5g62940 eggNOG:NOG236688 InParanoid:Q9FM03
OMA:MALAHSH PhylomeDB:Q9FM03 ProtClustDB:CLSN2687377
Genevestigator:Q9FM03 GermOnline:AT5G62940 Uniprot:Q9FM03
Length = 372
Score = 447 (162.4 bits), Expect = 3.3e-61, Sum P(3) = 3.3e-61
Identities = 108/248 (43%), Positives = 140/248 (56%)
Query: 29 SSSPSGDMLT-CSRPLME--RRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKT 85
S+ P + + LM+ RRLRPPHD KCPRC+STHTKFCYYNNYSLSQPRYFCKT
Sbjct: 43 STRPQASAVAVAAAALMDGGRRLRPPHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKT 102
Query: 86 CRRYWTKGGTLRNIPVGGGCRXXXX-XXXXXXXDQSMNQNPGSS-SHNPTDLQL---SFP 140
CRRYWTKGGTLRNIPVGGGCR S + P + + N +DL S
Sbjct: 103 CRRYWTKGGTLRNIPVGGGCRKNKKPSSSNSSSSTSSGKKPSNIVTANTSDLMALAHSHQ 162
Query: 141 EMQ-----FSHLGNILGAHGTLAN-NHNFMDNKYSAML-ENPRPIDFMENKLEAIVGSSR 193
Q FSH G ++G++ T + N F+++KY +L ++PRPIDF+++K + ++G
Sbjct: 163 NYQHSPLGFSHFGGMMGSYSTPEHGNVGFLESKYGGLLSQSPRPIDFLDSKFD-LMGV-- 219
Query: 194 NYDFXXXXXXXXXXXXXXXLSHH----HQEGLTPNVHNLCSPF-GMSL--DGTGGTFID- 245
N D +HH H GL N +N F G+S +G GG +D
Sbjct: 220 NNDNLVMVNHGSNGDHHHHHNHHMGLNHGVGLNNNNNN--GGFNGISTGGNGNGGGLMDI 277
Query: 246 -GCQRIML 252
CQR+ML
Sbjct: 278 STCQRLML 285
Score = 201 (75.8 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 66/194 (34%), Positives = 98/194 (50%)
Query: 129 SHNPTDLQLSFPEMQFSHLGNILGAHGTLAN-NHNFMDNKYSAML-ENPRPIDFMENKLE 186
+H+ + Q S P + FSH G ++G++ T + N F+++KY +L ++PRPIDF+++K +
Sbjct: 158 AHSHQNYQHS-P-LGFSHFGGMMGSYSTPEHGNVGFLESKYGGLLSQSPRPIDFLDSKFD 215
Query: 187 AI-VGSSRNYDFXXXXXXXXXXXXXXXLSHHHQEGLTPNVHNLCSPF-GMSL--DGTGGT 242
+ V + + +H GL N +N F G+S +G GG
Sbjct: 216 LMGVNNDNLVMVNHGSNGDHHHHHNHHMGLNHGVGLNNNNNN--GGFNGISTGGNGNGGG 273
Query: 243 FID--GCQRIMLP-YDANE---------VQNAIDVKPNAKLLSLDWQDQSC-SDVGYLGN 289
+D CQR+ML YD + V +DVKPN KLLSLDWQ C S+ G G
Sbjct: 274 LMDISTCQRLMLSNYDHHHYNHQEDHQRVATIMDVKPNPKLLSLDWQQDQCYSNGGGSGG 333
Query: 290 LGSSWSGMMNGYGS 303
G S G GYG+
Sbjct: 334 AGKSDGG---GYGN 344
Score = 107 (42.7 bits), Expect = 3.3e-61, Sum P(3) = 3.3e-61
Identities = 20/27 (74%), Positives = 24/27 (88%)
Query: 285 GYLGNLGSSWSGMMNGYGSST-TNSLV 310
GY+ LGSSW+G+MNGYG+ST TNSLV
Sbjct: 346 GYINGLGSSWNGLMNGYGTSTKTNSLV 372
Score = 102 (41.0 bits), Expect = 3.3e-61, Sum P(3) = 3.3e-61
Identities = 33/49 (67%), Positives = 34/49 (69%)
Query: 2 MGLTSLQVCMDSSDWLQGSIHEESG---LDSS--SPSG-DMLT-CS-RP 42
MGLTSLQVCMDS DWLQ S E SG LDSS SPS D+L CS RP
Sbjct: 1 MGLTSLQVCMDS-DWLQES--ESSGGSMLDSSTNSPSAADILAACSTRP 46
>TAIR|locus:2144030 [details] [associations]
symbol:TMO6 "TARGET OF MONOPTEROS 6" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0048364
"root development" evidence=IEP] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009944 "polarity
specification of adaxial/abaxial axis" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010075 "regulation of
meristem growth" evidence=RCA] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
HOGENOM:HOG000112244 ProtClustDB:CLSN2684760 EMBL:AB026632
EMBL:BT005866 EMBL:AY086054 IPI:IPI00545477 RefSeq:NP_568920.1
UniGene:At.29177 PaxDb:Q84TE9 PRIDE:Q84TE9
EnsemblPlants:AT5G60200.1 GeneID:836142 KEGG:ath:AT5G60200
GeneFarm:4476 TAIR:At5g60200 eggNOG:NOG268327 OMA:KENATYA
PhylomeDB:Q84TE9 Genevestigator:Q84TE9 GermOnline:AT5G60200
Uniprot:Q84TE9
Length = 257
Score = 319 (117.4 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 73/159 (45%), Positives = 88/159 (55%)
Query: 23 EESGLD-SSSPS---GDMLTCSRPLMERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQ 78
E GL SS+P+ D S R +PP + AL+CPRCDST+TKFCYYNNYSL+Q
Sbjct: 19 EAMGLSYSSNPTPLDNDQKKPSPATAVTRPQPP-ELALRCPRCDSTNTKFCYYNNYSLTQ 77
Query: 79 PRYFCKTCRRYWTKGGTLRNIPVGGGCRXXXXXXXXXXXDQSMNQNPGS----------- 127
PRYFCK+CRRYWTKGGTLRNIPVGGGCR P S
Sbjct: 78 PRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRSTSSAARSLRTTPEPASHDGKVFSAAGF 137
Query: 128 ---SSHNPTDLQLSFPEMQFSHLGNI--LGAHGTLANNH 161
S++ DL L+F + H G+ LG H L ++H
Sbjct: 138 NGYSNNEHIDLSLAFALLNKQHPGSSSQLGFHSELGSSH 176
Score = 43 (20.2 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 280 SCSDVGYLGNLGSSWSGMMNG-YGSS 304
S S +G+ LGSS M G +G+S
Sbjct: 162 SSSQLGFHSELGSSHQSDMEGMFGTS 187
>TAIR|locus:2040746 [details] [associations]
symbol:DOF2.4 "DNA binding with one finger 2.4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010089 "xylem development"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 EMBL:AC004684
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
HOGENOM:HOG000239956 EMBL:BT030014 IPI:IPI00519602 PIR:T02525
RefSeq:NP_181295.1 UniGene:At.50120 EnsemblPlants:AT2G37590.1
GeneID:818336 KEGG:ath:AT2G37590 GeneFarm:4464 TAIR:At2g37590
eggNOG:NOG313751 OMA:DEWRSAS PhylomeDB:O80928
ProtClustDB:CLSN2912900 Genevestigator:O80928 GermOnline:AT2G37590
Uniprot:O80928
Length = 330
Score = 295 (108.9 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 61/124 (49%), Positives = 76/124 (61%)
Query: 53 DQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRXXXXXX 112
+ ALKCPRC+ST+TKFCY+NNYSL+QPR+FCKTCRRYWT+GG LRN+PVGGGCR
Sbjct: 86 EAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNRRTK 145
Query: 113 XXXXXDQSMNQNPGSSSHNPTDLQLSFPEMQFSHLGNILGAHGTLANNHNFMDNKYS-AM 171
S N N +++ N T SF S + IL +H N + + S A
Sbjct: 146 S-----NSNNNNNSTATSNNT----SFSSGNASTISTILSSHYG-GNQESILSQILSPAR 195
Query: 172 LENP 175
L NP
Sbjct: 196 LMNP 199
Score = 61 (26.5 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 2 MGLTSLQVCMDSSDWLQG--SIHEESGLDSSSPSGDMLTCSRPLMERRLRP---PH 52
M +S+Q +DSS+W Q S + G +S+ G +L RP ++ + +P PH
Sbjct: 1 MVFSSIQAYLDSSNWQQAPPSNYNHDGTGASANGGHVL---RPQLQPQQQPQQQPH 53
>TAIR|locus:2134981 [details] [associations]
symbol:AT4G24060 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC002343 EMBL:AL161560 HOGENOM:HOG000239394 EMBL:AL109619
EMBL:AY037220 EMBL:BT008771 EMBL:AY087686 IPI:IPI00536658
IPI:IPI00548740 PIR:T13450 RefSeq:NP_567693.1 UniGene:At.3662
STRING:Q8LAP8 PRIDE:Q8LAP8 EnsemblPlants:AT4G24060.1 GeneID:828506
KEGG:ath:AT4G24060 GeneFarm:4472 TAIR:At4g24060 eggNOG:NOG270420
InParanoid:Q8LAP8 OMA:SCSAMAT PhylomeDB:Q8LAP8
ProtClustDB:CLSN2917601 Genevestigator:Q8LAP8 GermOnline:AT4G24060
Uniprot:Q8LAP8
Length = 342
Score = 297 (109.6 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 59/121 (48%), Positives = 73/121 (60%)
Query: 45 ERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGG 104
ER+ RP DQA+ CPRC+ST+TKFCYYNNYSL+QPRYFCK CRRYWT+GG+LRNIPVGGG
Sbjct: 42 ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGG 101
Query: 105 CRXXXXXXXXXXXDQSMNQNPGSSSHNPTDLQLSFPEMQFSHLGNILGAHGTLANNHNFM 164
R ++ N S+ T LS HL + + G N F+
Sbjct: 102 SRKNKRSHSSSS---DISNNHSDSTQPATKKHLSD---HHHHLMS-MSQQGLTGQNPKFL 154
Query: 165 D 165
+
Sbjct: 155 E 155
Score = 54 (24.1 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 22/91 (24%), Positives = 35/91 (38%)
Query: 213 LSHHHQEGLTPNVHNLCSPFGMSLDGTGGTFIDGCQRIMLPYDANEVQNAIDVKPNAKLL 272
L HHH G G D G + + + LP ++ +D+ + K
Sbjct: 261 LDHHHNNGFHGGFQG-GEEGGEGGDDVNGRHLFPFEDLKLPVSSSSATINVDINEHQKRG 319
Query: 273 SLDWQDQSCSDVGYLGNLGSSWSGMMNGYGS 303
S D + + GY W+GM++G GS
Sbjct: 320 S--GSDAAATSGGY-------WTGMLSG-GS 340
>TAIR|locus:2053175 [details] [associations]
symbol:AT2G28810 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC005727 EMBL:BT032877 IPI:IPI00541552 PIR:B84689
RefSeq:NP_850126.1 UniGene:At.38565 PRIDE:Q9ZV33
EnsemblPlants:AT2G28810.1 GeneID:817430 KEGG:ath:AT2G28810
GeneFarm:4462 TAIR:At2g28810 eggNOG:NOG301760 HOGENOM:HOG000239956
InParanoid:Q9ZV33 OMA:DPPINWP PhylomeDB:Q9ZV33
ProtClustDB:CLSN2690762 Genevestigator:Q9ZV33 GermOnline:AT2G28810
Uniprot:Q9ZV33
Length = 340
Score = 298 (110.0 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
Identities = 54/103 (52%), Positives = 69/103 (66%)
Query: 27 LDSSSPSGDMLTCSRPLMERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTC 86
+D SS +G R + + +PP + ALKCPRCDS +TKFCY+NNY+L+QPR+FCK C
Sbjct: 68 VDPSSLNGQ--AAERARLAKNSQPP-EGALKCPRCDSANTKFCYFNNYNLTQPRHFCKAC 124
Query: 87 RRYWTKGGTLRNIPVGGGCRXXXXXXXXXXXDQSMNQNPGSSS 129
RRYWT+GG LRN+PVGGGCR S +QN S+S
Sbjct: 125 RRYWTRGGALRNVPVGGGCRRNKKGKSGNSKSSSSSQNKQSTS 167
Score = 43 (20.2 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 124 NPGSSSHNPTDL-QLSFPEMQFSHLGNILGAHGTLANNHNFMDNKY 168
N G SS T + Q + +M+ +HLGNI L + N N+Y
Sbjct: 276 NMGLSSIGATRVSQTAQVKMEDNHLGNISRPVSGLTSPGN-QSNQY 320
>TAIR|locus:2181773 [details] [associations]
symbol:AT5G02460 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
HOGENOM:HOG000239956 EMBL:AL162874 EMBL:AL162971 EMBL:BX829408
IPI:IPI00547892 PIR:T48267 RefSeq:NP_195866.1 UniGene:At.33412
ProteinModelPortal:Q9LZ56 STRING:Q9LZ56 PRIDE:Q9LZ56
EnsemblPlants:AT5G02460.1 GeneID:830976 KEGG:ath:AT5G02460
GeneFarm:4474 TAIR:At5g02460 eggNOG:NOG272365 InParanoid:Q9LZ56
OMA:HHRAMAN PhylomeDB:Q9LZ56 ProtClustDB:CLSN2916772
Genevestigator:Q9LZ56 GermOnline:AT5G02460 Uniprot:Q9LZ56
Length = 399
Score = 279 (103.3 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 53/91 (58%), Positives = 65/91 (71%)
Query: 21 IHEESGLDSSSPSGDMLTCSRP--LMER-RLR--PPHDQALKCPRCDSTHTKFCYYNNYS 75
+H +G + G RP + ER RL P + ALKCPRCDST+TKFCY+NNYS
Sbjct: 55 LHHNNGNGGVAVPGGPGGLIRPGSMAERARLANIPLPETALKCPRCDSTNTKFCYFNNYS 114
Query: 76 LSQPRYFCKTCRRYWTKGGTLRNIPVGGGCR 106
L+QPR+FCK CRRYWT+GG LR++PVGGGCR
Sbjct: 115 LTQPRHFCKACRRYWTRGGALRSVPVGGGCR 145
Score = 48 (22.0 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 292 SSWSGMMNGYGSSTTNSL 309
SSWS + N + SS+T+++
Sbjct: 382 SSWSEVSNNFSSSSTSNI 399
>TAIR|locus:2056588 [details] [associations]
symbol:AT2G28510 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 EMBL:AC006587
EMBL:AY070421 EMBL:BT001954 EMBL:AY085635 IPI:IPI00520106
PIR:G84685 RefSeq:NP_565673.1 UniGene:At.28359 DNASU:817399
EnsemblPlants:AT2G28510.1 GeneID:817399 KEGG:ath:AT2G28510
GeneFarm:4461 TAIR:At2g28510 eggNOG:NOG301259 HOGENOM:HOG000112244
OMA:GRESWNG PhylomeDB:Q8LE43 ProtClustDB:CLSN2688517
Genevestigator:Q8LE43 GermOnline:AT2G28510 Uniprot:Q8LE43
Length = 288
Score = 284 (105.0 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 53/111 (47%), Positives = 67/111 (60%)
Query: 54 QALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRXXXXXXX 113
+A CPRC+S +TKFCYYNNYSLSQPRYFCK+CRRYWTKGGTLRN+PVGGGCR
Sbjct: 46 EAQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSS 105
Query: 114 XXXXDQSMNQNPGSSS---HNPTDLQLSFPEMQFSHLGNILGAHGTLANNH 161
+ N++ + NP + + H ++ A TL +H
Sbjct: 106 SAFSKNNNNKSINFHTDPLQNPLITGMPPSSFGYDHSIDLNLAFATLQKHH 156
Score = 39 (18.8 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 16/77 (20%), Positives = 31/77 (40%)
Query: 234 MSLDGTGGTFIDGCQRIMLPYDANEVQNAIDVKPNAKLLSLDWQ--DQSCSDVGYLGNLG 291
+ + T G ++G +R + N N + P+ WQ S V +
Sbjct: 212 IKMASTLGMSLEGNERKQ--ENVNNNNNNSE-NPSKVFWGFPWQMTGDSAGVVPEIDPGR 268
Query: 292 SSWSGMMNGYGSSTTNS 308
SW+GM++ + + N+
Sbjct: 269 ESWNGMVSSWNNGLLNT 285
>TAIR|locus:2085697 [details] [associations]
symbol:DOF6 "DOF transcription factor 6" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000112244 EMBL:AJ243033
EMBL:AL138657 EMBL:AY062783 EMBL:BT006284 IPI:IPI00532759
PIR:T47501 RefSeq:NP_190147.1 UniGene:At.478
EnsemblPlants:AT3G45610.1 GeneID:823703 KEGG:ath:AT3G45610
GeneFarm:4402 TAIR:At3g45610 eggNOG:NOG258725 OMA:NISNEQM
PhylomeDB:Q9M1E6 ProtClustDB:CLSN2684760 Genevestigator:Q9M1E6
GermOnline:AT3G45610 Uniprot:Q9M1E6
Length = 245
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 64/132 (48%), Positives = 80/132 (60%)
Query: 20 SIHEE-SGLDSSSPSGDMLTCSRPLMERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQ 78
S+H+ G+ S S D +PL R PP +Q+L+CPRCDST+TKFCYYNNYSLSQ
Sbjct: 5 SMHQNVMGVSSCSTQ-DYQNQKKPLSATRPAPP-EQSLRCPRCDSTNTKFCYYNNYSLSQ 62
Query: 79 PRYFCKTCRRYWTKGGTLRNIPVGGGCRXXXXXXXXXXXDQSMNQNPGSS-SHNPTDLQL 137
PRYFCK+CRRYWTKGG LRNIP+GG R +S+ P + +H+
Sbjct: 63 PRYFCKSCRRYWTKGGILRNIPIGGAYRKHKRSSSAT---KSLRTTPEPTMTHDGK---- 115
Query: 138 SFPEMQFSHLGN 149
SFP F + N
Sbjct: 116 SFPTASFGYNNN 127
>TAIR|locus:2019499 [details] [associations]
symbol:AT1G64620 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC009519 EMBL:BT004047 EMBL:BT005148 EMBL:AY084898
IPI:IPI00537731 PIR:E96669 RefSeq:NP_564836.1 UniGene:At.35979
IntAct:Q84JQ8 EnsemblPlants:AT1G64620.1 GeneID:842770
KEGG:ath:AT1G64620 GeneFarm:4460 TAIR:At1g64620 eggNOG:NOG247852
HOGENOM:HOG000239394 InParanoid:Q84JQ8 OMA:KPMNEIV PhylomeDB:Q84JQ8
ProtClustDB:CLSN2917381 Genevestigator:Q84JQ8 GermOnline:AT1G64620
Uniprot:Q84JQ8
Length = 352
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 58/109 (53%), Positives = 68/109 (62%)
Query: 44 MERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGG 103
+ER+ RP DQAL CPRC+S +TKFCYYNNYSL+QPRYFCK CRRYWT GG+LRNIPVGG
Sbjct: 37 VERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGG 96
Query: 104 GCRXXXXXXXXXXXDQSMNQNPGSSSHNPTDLQLSFPEMQFSHLGNILG 152
G R S + + SSS P + P HL +G
Sbjct: 97 GVRKNKRSSSNSS---SSSPSSSSSSKKPLFANNNTPTPPLPHLNPKIG 142
>TAIR|locus:2026595 [details] [associations]
symbol:OBP2 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009611 "response to wounding"
evidence=IEP] [GO:0009625 "response to insect" evidence=IEP]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IEP]
[GO:0010439 "regulation of glucosinolate biosynthetic process"
evidence=IEP] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0009595
"detection of biotic stimulus" evidence=RCA] [GO:0009697 "salicylic
acid biosynthetic process" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043900
"regulation of multi-organism process" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] [GO:0003002
"regionalization" evidence=IMP] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 EMBL:CP002684
GO:GO:0005634 GO:GO:0009753 GO:GO:0009611 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 EMBL:AC007583 GO:GO:0009625
HOGENOM:HOG000239956 ProtClustDB:CLSN2690762 GO:GO:0010439
GO:GO:0003002 IPI:IPI00657301 RefSeq:NP_001030988.1
UniGene:At.14846 STRING:Q2V4Q1 PRIDE:Q2V4Q1
EnsemblPlants:AT1G07640.3 GeneID:837277 KEGG:ath:AT1G07640
OMA:NIHENNN Genevestigator:Q2V4Q1 Uniprot:Q2V4Q1
Length = 339
Score = 279 (103.3 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
Identities = 49/82 (59%), Positives = 58/82 (70%)
Query: 50 PPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRXXX 109
PP LKCPRCDS++TKFCYYNNY+L+QPR+FCK CRRYWT+GG LRN+PVGGGCR
Sbjct: 79 PPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNN 138
Query: 110 XXXXXXXXDQSMNQNPGSSSHN 131
S + + SSS N
Sbjct: 139 KKGKNGNLKSSSSSSKQSSSVN 160
Score = 39 (18.8 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 213 LSHHHQEGLTPNVHNLCS--PFGMSLDGTGG 241
L +HQ +P ++NL G++L T G
Sbjct: 169 LRTNHQFPFSPTLYNLTQLGGIGLNLAATNG 199
>TAIR|locus:2039959 [details] [associations]
symbol:DAG2 "DOF AFFECTING GERMINATION 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009409 "response
to cold" evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=IMP] [GO:0009845 "seed germination" evidence=IMP]
[GO:0006598 "polyamine catabolic process" evidence=RCA] [GO:0009698
"phenylpropanoid metabolic process" evidence=RCA] [GO:0042398
"cellular modified amino acid biosynthetic process" evidence=RCA]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0009409
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0009845
GO:GO:0009416 EMBL:AC006418 HOGENOM:HOG000239394 EMBL:AJ237810
EMBL:AJ237811 EMBL:BT003328 EMBL:BT008842 IPI:IPI00533417
IPI:IPI00547843 PIR:G84904 RefSeq:NP_001031549.1 RefSeq:NP_182182.2
UniGene:At.43221 PRIDE:Q9ZPY0 EnsemblPlants:AT2G46590.2
GeneID:819271 KEGG:ath:AT2G46590 GeneFarm:4409 TAIR:At2g46590
eggNOG:NOG252364 InParanoid:Q9ZPY0 OMA:NARPNTI PhylomeDB:Q9ZPY0
ProtClustDB:CLSN2684099 Genevestigator:Q9ZPY0 GermOnline:AT2G46590
Uniprot:Q9ZPY0
Length = 369
Score = 268 (99.4 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 45/62 (72%), Positives = 53/62 (85%)
Query: 45 ERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGG 104
ER+ RP + L CPRC+ST+TKFCYYNNYSL+QPRYFCK CRRYWT+GG+LRN+PVGG
Sbjct: 71 ERKARP--QEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGS 128
Query: 105 CR 106
R
Sbjct: 129 SR 130
Score = 43 (20.2 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 118 DQSMNQNPGSSSHNPTDLQL-SFPEMQFSH 146
+Q N++ GSS DL L SFP MQ H
Sbjct: 162 NQIHNKSKGSSQ----DLNLLSFPVMQDQH 187
>TAIR|locus:2032153 [details] [associations]
symbol:AT1G28310 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
EMBL:CP002684 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
EMBL:AC021044 IPI:IPI00656949 RefSeq:NP_001031100.1
UniGene:At.40918 PRIDE:Q2V4K7 EnsemblPlants:AT1G28310.2
GeneID:839725 KEGG:ath:AT1G28310 HOGENOM:HOG000097069 OMA:MIVASSH
ProtClustDB:CLSN2719915 Genevestigator:Q2V4K7 Uniprot:Q2V4K7
Length = 325
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 59/138 (42%), Positives = 79/138 (57%)
Query: 29 SSSPSGDMLTCSRPLMERRLRPPHDQA-LKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCR 87
+S S +M+ S +++ +P Q LKCPRCDS++TKFCYYNNYSLSQPR+FCK C+
Sbjct: 13 ASMQSKNMIVASSHQQQQQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACK 72
Query: 88 RYWTKGGTLRNIPVGGGCRXXXX----XXXXXXXDQSMNQNPGSSSHNPTDLQLSFPEMQ 143
RYWT+GGTLRN+PVGG R +++ SS +NP + F M
Sbjct: 73 RYWTRGGTLRNVPVGGSYRKNKRVKRPSTATTTTASTVSTTNSSSPNNPHQIS-HFSSMN 131
Query: 144 FSHLGNILGAHGTLANNH 161
L L H + NN+
Sbjct: 132 HHPLFYGLSDHMSSCNNN 149
>TAIR|locus:2155755 [details] [associations]
symbol:AT5G65590 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AB026639 HOGENOM:HOG000090627 EMBL:BT014981 EMBL:BT015717
IPI:IPI00521298 RefSeq:NP_201362.1 UniGene:At.28900
EnsemblPlants:AT5G65590.1 GeneID:836685 KEGG:ath:AT5G65590
GeneFarm:4479 TAIR:At5g65590 eggNOG:NOG306856 InParanoid:Q9LSL6
OMA:SGRENTP PhylomeDB:Q9LSL6 ProtClustDB:CLSN2686628
Genevestigator:Q9LSL6 GermOnline:AT5G65590 Uniprot:Q9LSL6
Length = 316
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 50/76 (65%), Positives = 58/76 (76%)
Query: 54 QALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRXXXXXXX 113
Q LKCPRC+S +TKFCYYNNYSLSQPR+FCK+CRRYWT+GG LRN+P+GGGCR
Sbjct: 39 QNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRKTKKSIK 98
Query: 114 XXXXDQSMNQNPGSSS 129
+ SMN P SSS
Sbjct: 99 P---NSSMNTLPSSSS 111
>TAIR|locus:2159275 [details] [associations]
symbol:OBP4 "OBF binding protein 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 EMBL:AB015472 EMBL:AF155817
EMBL:AY056413 EMBL:AY081709 EMBL:AY085856 IPI:IPI00530257
RefSeq:NP_200893.1 UniGene:At.20219 EnsemblPlants:AT5G60850.1
GeneID:836206 KEGG:ath:AT5G60850 GeneFarm:4392 TAIR:At5g60850
eggNOG:NOG253520 HOGENOM:HOG000090954 OMA:WSQSQWT PhylomeDB:Q8LDR0
ProtClustDB:CLSN2686706 Genevestigator:Q8LDR0 GermOnline:AT5G60850
Uniprot:Q8LDR0
Length = 307
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 45/55 (81%), Positives = 51/55 (92%)
Query: 52 HDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCR 106
H Q+LKCPRC+S +TKFCYYNNY+LSQPR+FCK CRRYWTKGG LRN+PVGGGCR
Sbjct: 47 HHQSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCR 101
>TAIR|locus:505006172 [details] [associations]
symbol:AT1G47655 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC007519 EMBL:AB493502 IPI:IPI00541489 PIR:E96517
RefSeq:NP_564510.1 UniGene:At.38579 EnsemblPlants:AT1G47655.1
GeneID:841175 KEGG:ath:AT1G47655 GeneFarm:4459 TAIR:At1g47655
eggNOG:NOG248157 HOGENOM:HOG000005865 OMA:GLEISMQ
ProtClustDB:CLSN2917178 Genevestigator:Q9SX97 GermOnline:AT1G47655
Uniprot:Q9SX97
Length = 209
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 50/111 (45%), Positives = 71/111 (63%)
Query: 50 PPH-DQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRXX 108
PP+ + L CPRC+ST TKFCYYNNY+L+QPRY+CK+CRRYWT+GGTLR++PVGGG R
Sbjct: 22 PPNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCRRYWTQGGTLRDVPVGGGTRRS 81
Query: 109 XXXXXXXXXDQSMNQNPGSSSHNPTDLQLSFPEMQFSHLGNILGAHGTLAN 159
+ + + SS T + + E + + N++ HG+ A+
Sbjct: 82 SSKRHRSFSTTATSSSSSSSVITTTTQEPATTEASQTKVTNLISGHGSFAS 132
>TAIR|locus:2094746 [details] [associations]
symbol:DOF2 "DOF zinc finger protein 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0019344
"cysteine biosynthetic process" evidence=RCA] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0003677 EMBL:AB023045 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 HOGENOM:HOG000005865 ProtClustDB:CLSN2679425
EMBL:AB017565 EMBL:AY045847 EMBL:AY150391 IPI:IPI00526237
PIR:T52045 RefSeq:NP_188764.1 UniGene:At.257
EnsemblPlants:AT3G21270.1 GeneID:821681 KEGG:ath:AT3G21270
GeneFarm:4401 TAIR:At3g21270 eggNOG:NOG280617 InParanoid:Q94AR6
OMA:GMEIGGS PhylomeDB:Q94AR6 Genevestigator:Q94AR6
GermOnline:AT3G21270 Uniprot:Q94AR6
Length = 204
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 47/78 (60%), Positives = 56/78 (71%)
Query: 54 QALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRXXXXXXX 113
+ LKCPRCDS +TKFCYYNNY+LSQPR+FCK+CRRYWTKGG LRN+PVGGG R
Sbjct: 27 EQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKNATKRS 86
Query: 114 XXXXDQSMNQNPGSSSHN 131
+ +P +SS N
Sbjct: 87 TSSSSSA--SSPSNSSQN 102
>TAIR|locus:2017567 [details] [associations]
symbol:DOF1 "DOF zinc finger protein 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010200
"response to chitin" evidence=IEP] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
EMBL:AC025294 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0010200 HOGENOM:HOG000005865 EMBL:AB017564 IPI:IPI00532555
PIR:T52044 RefSeq:NP_175581.1 UniGene:At.256 PRIDE:O82155
EnsemblPlants:AT1G51700.1 GeneID:841595 KEGG:ath:AT1G51700
GeneFarm:4400 TAIR:At1g51700 eggNOG:NOG318115 InParanoid:O82155
OMA:LASNMQM PhylomeDB:O82155 ProtClustDB:CLSN2679425
Genevestigator:O82155 GermOnline:AT1G51700 Uniprot:O82155
Length = 194
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 47/73 (64%), Positives = 51/73 (69%)
Query: 51 PHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRXXXX 110
P + LKCPRCDS +TKFCYYNNY+LSQPR+FCK CRRYWTKGG LRNIPVGGG R
Sbjct: 28 PEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSNK 87
Query: 111 XXXXXXXDQSMNQ 123
NQ
Sbjct: 88 RSGSSPSSNLKNQ 100
>TAIR|locus:2079492 [details] [associations]
symbol:DAG1 "dof affecting germination 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009845 "seed germination" evidence=IMP]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009639 "response to red or far red
light" evidence=IMP] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634
EMBL:CP002686 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0009639 EMBL:AL138642 HOGENOM:HOG000239394
ProtClustDB:CLSN2684099 IPI:IPI00892346 RefSeq:NP_001118885.1
UniGene:At.989 STRING:B3H6D1 PRIDE:B3H6D1 EnsemblPlants:AT3G61850.4
GeneID:825358 KEGG:ath:AT3G61850 OMA:IGHNTIN Genevestigator:B3H6D1
Uniprot:B3H6D1
Length = 324
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 96/294 (32%), Positives = 130/294 (44%)
Query: 29 SSSPSGDMLTCSRPLMERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRR 88
S+ SG + + R+ RP + + CPRC+ST+TKFCYYNNYSL+QPRYFCK CRR
Sbjct: 49 SNGGSGGNTNNTATMETRKARP--QEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRR 106
Query: 89 YWTKGGTLRNIPVGGGCRXXXXXXXXXXXDQSM---NQNPGS--SSHNPT----DLQL-S 138
YWT+GG+LRN+PVGG R + + NP SS P DL L S
Sbjct: 107 YWTEGGSLRNVPVGGSSRKNKRSSTPLASPSNPKLPDLNPPILFSSQIPNKSNKDLNLLS 166
Query: 139 FPEMQ-FSHLGNILGAHGTLANNHNFMDNKYSAMLENPRPIDFMENKLEAIVGSSRNYD- 196
FP MQ H G H N+N + Y++ P+ +E L + SSR +
Sbjct: 167 FPVMQDHHHHGMSHFFHMPKIENNNTSSSIYASS----SPVSALE-LLRSNGVSSRGMNT 221
Query: 197 FXXXXXXXXXXXXXXXLSHHHQEGLTPNVHNLCSPFGMSLD---GTGGTFIDGCQRIMLP 253
F L + +NL S+D G G I+ QR
Sbjct: 222 FLPGQMMDSNSVLYSSLGFPTMPDYKQSNNNL----SFSIDHHQGIGHNTINSNQRAQ-- 275
Query: 254 YDANEVQNAID--VKPNAKLLSLDWQDQSCSDVGYLGNLGSSWSGMMNGYGSST 305
D N+ N + P + + L Q S GN + W+GM + G S+
Sbjct: 276 -DNNDDMNGASRVLFPFSDMKELSSTTQEKSH----GN-NTYWNGMFSNTGGSS 323
>TAIR|locus:2027027 [details] [associations]
symbol:AT1G21340 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
EMBL:CP002684 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 EMBL:AC015447
EMBL:DQ446268 IPI:IPI00548608 RefSeq:NP_173556.1 UniGene:At.51708
EnsemblPlants:AT1G21340.1 GeneID:838733 KEGG:ath:AT1G21340
GeneFarm:4455 TAIR:At1g21340 eggNOG:NOG324820 InParanoid:P68349
OMA:GRNENRP PhylomeDB:P68349 ProtClustDB:CLSN2913539
ArrayExpress:P68349 Genevestigator:P68349 Uniprot:P68349
Length = 260
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 51/84 (60%), Positives = 55/84 (65%)
Query: 58 CPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRXXXXXXXXXXX 117
CPRC S++TKFCYYNNYSLSQPRYFCK CRRYWTKGG+LRNIPVGGGCR
Sbjct: 40 CPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGGCRKRSRSRQNSHK 99
Query: 118 DQSMNQNPGSSSHNPTD-LQLSFP 140
N+N N D Q S P
Sbjct: 100 RFGRNENRPDGLINQDDGFQSSPP 123
>TAIR|locus:2079954 [details] [associations]
symbol:AT3G52440 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002686 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 EMBL:AL050300
IPI:IPI00523054 PIR:T08455 RefSeq:NP_190812.1 UniGene:At.53903
EnsemblPlants:AT3G52440.1 GeneID:824409 KEGG:ath:AT3G52440
GeneFarm:4465 TAIR:At3g52440 eggNOG:NOG271786 InParanoid:Q9SVC5
OMA:YANFLNP PhylomeDB:Q9SVC5 ProtClustDB:CLSN2915499
Genevestigator:Q9SVC5 Uniprot:Q9SVC5
Length = 247
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 53/114 (46%), Positives = 67/114 (58%)
Query: 58 CPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRXXXXXXXXXXX 117
CPRC S++TKFCYYNNYSL+QPRYFCK CRRYWTKGG+LRN+PVGGGCR
Sbjct: 27 CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRPKSSSGN 86
Query: 118 DQ--SMNQNPGSSSHNPTDLQLSFPEMQFSHLG---NILGAHGTLANNHNFMDN 166
+ S+ N G+ + L+ F + +IL + LA +DN
Sbjct: 87 NTKTSLTANSGNPGGGSPSIDLALVYANFLNPKPDESILQENCDLATTDFLVDN 140
>TAIR|locus:2134658 [details] [associations]
symbol:AT4G00940 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006457 "protein
folding" evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0009691 "cytokinin biosynthetic process" evidence=RCA]
[GO:0042542 "response to hydrogen peroxide" evidence=RCA]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 EMBL:AF013294 EMBL:AL161491
HOGENOM:HOG000239394 EMBL:AB493666 IPI:IPI00517988 PIR:F85012
PIR:T01552 RefSeq:NP_192003.2 UniGene:At.34496 PRIDE:Q9M161
EnsemblPlants:AT4G00940.1 GeneID:827952 KEGG:ath:AT4G00940
GeneFarm:4466 TAIR:At4g00940 eggNOG:NOG310367 PhylomeDB:Q9M161
ProtClustDB:CLSN2915022 Genevestigator:Q9M161 GermOnline:AT4G00940
Uniprot:Q9M161
Length = 294
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 61/168 (36%), Positives = 90/168 (53%)
Query: 27 LDSSSPSGDMLTCSRPLMERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTC 86
+DS++ + ++ + LM P + CPRC+S++TKFCYYNNYSL+QPRY CK+C
Sbjct: 40 MDSTTATTMIMDDEKKLMTTMSTRPQEPR-NCPRCNSSNTKFCYYNNYSLAQPRYLCKSC 98
Query: 87 RRYWTKGGTLRNIPVGGGCRXXXXXXXXXXXDQSMNQNPGSSSHNPTDLQLSFPEMQFSH 146
RRYWT+GG+LRN+PVGGG R N + SS+ N DL P F+
Sbjct: 99 RRYWTEGGSLRNVPVGGGSRKNKKLPFP-------NSSTSSSTKNLPDLN---PPFVFTS 148
Query: 147 LGNILGAHGTLANNHNFMDNKYSAMLENPRPIDFMENKLEAIVGSSRN 194
+ T NN N + +S+ +++ R + E +V +N
Sbjct: 149 SASSSNPSKTHQNN-NDLSLSFSSPMQDKRAQGHYGHFSEQVVTGGQN 195
>TAIR|locus:2074850 [details] [associations]
symbol:OBP1 "OBF binding protein 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0042545 "cell wall modification"
evidence=IMP] [GO:0045787 "positive regulation of cell cycle"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0009733 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009751 GO:GO:0045787 GO:GO:0042545 EMBL:AL132976
HOGENOM:HOG000005865 EMBL:X89192 IPI:IPI00523996 PIR:T46072
RefSeq:NP_190610.1 UniGene:At.20758 IntAct:Q39088 PRIDE:Q39088
EnsemblPlants:AT3G50410.1 GeneID:824205 KEGG:ath:AT3G50410
GeneFarm:4389 TAIR:At3g50410 eggNOG:NOG293819 InParanoid:Q39088
OMA:EPRRIAM PhylomeDB:Q39088 Genevestigator:Q39088
GermOnline:AT3G50410 Uniprot:Q39088
Length = 253
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 51/102 (50%), Positives = 63/102 (61%)
Query: 50 PPHDQA--LKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRX 107
P DQ L CPRCDS++TKFCYYNNY+ SQPR+FCK CRRYWT GGTLR++PVGGG R
Sbjct: 22 PISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTRK 81
Query: 108 XXXXXXXXXXDQSMNQNPGSSSHNPTDLQLS---FPEMQFSH 146
S + + S+ N LQ + FP+ S+
Sbjct: 82 SAKRSRTCSNSSSSSVSGVVSNSNGVPLQTTPVLFPQSSISN 123
>TAIR|locus:2121041 [details] [associations]
symbol:DOF4.7 "DNA binding with one finger 4.7"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010227 "floral organ abscission"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006863 "purine nucleobase
transport" evidence=RCA] InterPro:IPR003851 Pfam:PF02701
ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161592
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0010227 EMBL:AL035538 EMBL:BT005767
EMBL:BT006092 IPI:IPI00529950 PIR:T05627 RefSeq:NP_195513.2
UniGene:At.2738 EnsemblPlants:AT4G38000.1 GeneID:829956
KEGG:ath:AT4G38000 GeneFarm:4473 TAIR:At4g38000 eggNOG:NOG286318
HOGENOM:HOG000090627 OMA:TSGNHED PhylomeDB:Q84K52
ProtClustDB:CLSN2918298 Genevestigator:Q84K52 GermOnline:AT4G38000
Uniprot:Q84K52
Length = 246
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 42/66 (63%), Positives = 50/66 (75%)
Query: 41 RPLMERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIP 100
R + + P LKCPRCDS +TKFCYYNNYSLSQPR++CK CRRYWT+GG LRN+P
Sbjct: 26 RQINNKEPSPATQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVP 85
Query: 101 VGGGCR 106
+GG R
Sbjct: 86 IGGSTR 91
>TAIR|locus:2133079 [details] [associations]
symbol:DOF4.4 "DNA-binding with One Finger 4.4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010154 "fruit development" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:2000032 "regulation of secondary shoot formation" evidence=IMP]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0010154 HOGENOM:HOG000097076 ProtClustDB:CLSN2685338
GO:GO:2000032 EMBL:AB493689 IPI:IPI00543578 PIR:T10647
RefSeq:NP_193837.1 UniGene:At.54450 PRIDE:Q9SUA9 DNASU:827852
EnsemblPlants:AT4G21050.1 GeneID:827852 KEGG:ath:AT4G21050
GeneFarm:4469 TAIR:At4g21050 eggNOG:NOG287569 OMA:NYSESQP
PhylomeDB:Q9SUA9 Genevestigator:Q9SUA9 GermOnline:AT4G21050
Uniprot:Q9SUA9
Length = 210
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 44/58 (75%), Positives = 47/58 (81%)
Query: 49 RPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCR 106
RPP + CPRCDS +TKFC+YNNYS SQPRYFCK CRRYWT GG LRNIPVGG CR
Sbjct: 19 RPPPSRV--CPRCDSDNTKFCFYNNYSESQPRYFCKNCRRYWTHGGALRNIPVGGSCR 74
>TAIR|locus:2158078 [details] [associations]
symbol:AT5G66940 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
HOGENOM:HOG000005865 EMBL:AB026640 EMBL:BT029523 IPI:IPI00549015
RefSeq:NP_201495.1 UniGene:At.66743 DNASU:836828
EnsemblPlants:AT5G66940.1 GeneID:836828 KEGG:ath:AT5G66940
GeneFarm:4480 TAIR:At5g66940 eggNOG:NOG310676 InParanoid:Q9FGD6
OMA:LINYNAA PhylomeDB:Q9FGD6 ProtClustDB:CLSN2916526
ArrayExpress:Q9FGD6 Genevestigator:Q9FGD6 GermOnline:AT5G66940
Uniprot:Q9FGD6
Length = 225
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 56/131 (42%), Positives = 73/131 (55%)
Query: 51 PHDQA--LKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRXX 108
P DQ L CPRC+ST+TKFCYYNNY+ SQPR+FCK+CRRYWT GGTLR+IPVGG R
Sbjct: 25 PTDQQEQLSCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSRKS 84
Query: 109 XXXXXXXXXDQSMNQNPGSSSHNPTDLQLSFPEMQFSHLGNILGAHGTLANNHNFMDN-- 166
+ + GS + + FP Q S G I A G+ ++ + +
Sbjct: 85 SKRSRTYSSAATTSV-VGSRNFPLQATPVLFP--QSSSNGGITTAKGSASSFYGGFSSLI 141
Query: 167 KYSAMLENPRP 177
Y+A + P
Sbjct: 142 NYNAAVSRNGP 152
>TAIR|locus:2133064 [details] [associations]
symbol:DOF4.3 "AT4G21040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478
PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
HOGENOM:HOG000097076 ProtClustDB:CLSN2685338 EMBL:AB493688
IPI:IPI00544172 PIR:T10646 RefSeq:NP_193836.1 UniGene:At.64193
DNASU:827851 EnsemblPlants:AT4G21040.1 GeneID:827851
KEGG:ath:AT4G21040 GeneFarm:4468 TAIR:At4g21040 eggNOG:NOG279085
PhylomeDB:Q9SUB0 Genevestigator:Q9SUB0 Uniprot:Q9SUB0
Length = 232
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 43/85 (50%), Positives = 50/85 (58%)
Query: 48 LRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRX 107
++PP C RCDS +TKFCYYNNYS QPRYFCK CRRYWT GG LRN+P+GG R
Sbjct: 17 VKPPPPPPRVCARCDSDNTKFCYYNNYSEFQPRYFCKNCRRYWTHGGALRNVPIGGSSRA 76
Query: 108 XXXXXXXXXXDQSMNQNPGSSSHNP 132
Q ++ SH P
Sbjct: 77 KRTRINQPSVAQMVSVGIQPGSHKP 101
>TAIR|locus:2164860 [details] [associations]
symbol:CDF2 "cycling DOF factor 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0048510 "regulation of timing
of transition from vegetative to reproductive phase" evidence=IMP]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000239772 EMBL:AB012243
EMBL:AY056804 EMBL:BT015791 IPI:IPI00544938 RefSeq:NP_568567.1
RefSeq:NP_851106.1 UniGene:At.26292 IntAct:Q93ZL5 STRING:Q93ZL5
PRIDE:Q93ZL5 EnsemblPlants:AT5G39660.1 EnsemblPlants:AT5G39660.2
GeneID:833962 KEGG:ath:AT5G39660 GeneFarm:4475 TAIR:At5g39660
eggNOG:NOG255195 InParanoid:Q93ZL5 OMA:ANFHESS PhylomeDB:Q93ZL5
ProtClustDB:CLSN2689899 Genevestigator:Q93ZL5 GermOnline:AT5G39660
Uniprot:Q93ZL5
Length = 457
Score = 248 (92.4 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 47/98 (47%), Positives = 60/98 (61%)
Query: 39 CSRPLMERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRN 98
CS+ E +L+ P D+ L CPRC+S TKFCYYNNY+++QPR+FCK C+RYWT GGT+RN
Sbjct: 125 CSQ---EGKLKKP-DKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRN 180
Query: 99 IPVGGGCRXXXXXXXXXXXDQSMNQNPGSSSHNPTDLQ 136
+PVG G R S+ TDLQ
Sbjct: 181 VPVGAGRRKNKSPASHYNRHVSITSAEAMQKVARTDLQ 218
>TAIR|locus:2127353 [details] [associations]
symbol:DOF4.5 "DNA-binding with One Finger 4.5"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478
PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161554 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 EMBL:AL021960
HOGENOM:HOG000097076 ProtClustDB:CLSN2685338 eggNOG:NOG279085
EMBL:AB493690 IPI:IPI00526819 PIR:T04939 RefSeq:NP_193840.1
UniGene:At.64194 DNASU:827855 EnsemblPlants:AT4G21080.1
GeneID:827855 KEGG:ath:AT4G21080 GeneFarm:4470 TAIR:At4g21080
OMA:ARMVSVE PhylomeDB:O49550 Genevestigator:O49550
GermOnline:AT4G21080 Uniprot:O49550
Length = 249
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 52/124 (41%), Positives = 61/124 (49%)
Query: 48 LRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRX 107
++PP C RCDS +TKFCYYNNY QPRYFCK CRRYWT GG LRNIP+GG R
Sbjct: 17 VKPPPPPPRVCARCDSDNTKFCYYNNYCEFQPRYFCKNCRRYWTHGGALRNIPIGGSSRA 76
Query: 108 XXX-------XXXXXXXDQSMNQNPGSSSHNPTDLQLSFPEMQFSHLGNILGAHGTLANN 160
Q N P S+ L SF S +G + G+L +
Sbjct: 77 KRARVNQPSVARMVSVETQRGNNQPFSNVQENVHLVGSFGASSSSSVGAVGNLFGSLYDI 136
Query: 161 HNFM 164
H M
Sbjct: 137 HGGM 140
>TAIR|locus:2154079 [details] [associations]
symbol:CDF1 "AT5G62430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0048510 "regulation of timing of transition from
vegetative to reproductive phase" evidence=IMP] [GO:0009658
"chloroplast organization" evidence=IMP] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0009658 GO:GO:0048510 EMBL:AB015469
EMBL:AB231333 EMBL:AF446362 EMBL:AY143830 IPI:IPI00525269
IPI:IPI00529068 RefSeq:NP_201049.3 UniGene:At.9300 IntAct:Q8W1E3
STRING:Q8W1E3 EnsemblPlants:AT5G62430.1 GeneID:836364
KEGG:ath:AT5G62430 GeneFarm:4477 TAIR:At5g62430 eggNOG:NOG237530
HOGENOM:HOG000239772 InParanoid:Q8W1E3 KO:K16222 OMA:ARIENND
PhylomeDB:Q8W1E3 ProtClustDB:CLSN2920562 Genevestigator:Q8W1E3
GermOnline:AT5G62430 Uniprot:Q8W1E3
Length = 298
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 46/105 (43%), Positives = 68/105 (64%)
Query: 45 ERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGG 104
++ L+ P + L CPRC+S TKFCYYNNY+++QPR+FCK C+RYWT GGT+R++P+G G
Sbjct: 44 DKTLKKP-TKILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAG 102
Query: 105 CRXXXXXXXXXXXDQSMNQNPGSSSHNPTDLQLSFPEMQFSHLGN 149
R ++ N +P S H+ T + + P + FS LG+
Sbjct: 103 RR------------KNKNNSPTSHYHHVTISETNGPVLSFS-LGD 134
>TAIR|locus:2007151 [details] [associations]
symbol:AT1G69570 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IDA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC073178 HOGENOM:HOG000239772 EMBL:AF079504 EMBL:AC021046
EMBL:AK176346 EMBL:BT025623 IPI:IPI00525897 PIR:D96717 PIR:T51953
RefSeq:NP_177116.1 UniGene:At.10732 STRING:Q9SEZ3
EnsemblPlants:AT1G69570.1 GeneID:843293 KEGG:ath:AT1G69570
GeneFarm:4399 TAIR:At1g69570 eggNOG:NOG236464 OMA:RINDTNT
PhylomeDB:Q9SEZ3 ProtClustDB:CLSN2682558 Genevestigator:Q9SEZ3
GermOnline:AT1G69570 Uniprot:Q9SEZ3
Length = 399
Score = 240 (89.5 bits), Expect = 6.0e-20, P = 6.0e-20
Identities = 37/59 (62%), Positives = 50/59 (84%)
Query: 48 LRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCR 106
L+ P D+ + CPRC+S +TKFCYYNNY+++QPRYFC+ C+RYWT GG++RN+PVG G R
Sbjct: 125 LKKP-DKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRR 182
>TAIR|locus:2079152 [details] [associations]
symbol:CDF3 "cycling DOF factor 3" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0048510 "regulation of timing
of transition from vegetative to reproductive phase" evidence=IMP]
InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361
PROSITE:PS50884 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 EMBL:AL132955 HOGENOM:HOG000239772
EMBL:AF079503 EMBL:AY065152 EMBL:AY128757 EMBL:AY084628
IPI:IPI00547330 PIR:T45710 RefSeq:NP_190334.1 UniGene:At.519
IntAct:Q8LFV3 STRING:Q8LFV3 EnsemblPlants:AT3G47500.1 GeneID:823904
KEGG:ath:AT3G47500 GeneFarm:4398 TAIR:At3g47500 eggNOG:NOG295870
InParanoid:Q8LFV3 OMA:KDNETER PhylomeDB:Q8LFV3
ProtClustDB:CLSN2915701 Genevestigator:Q8LFV3 GermOnline:AT3G47500
Uniprot:Q8LFV3
Length = 448
Score = 234 (87.4 bits), Expect = 4.6e-19, P = 4.6e-19
Identities = 38/61 (62%), Positives = 48/61 (78%)
Query: 46 RRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGC 105
+ L+ P + L CPRC S TKFCYYNNY+++QPR+FCK C+RYWT GGT+RN+PVG G
Sbjct: 101 KTLKKP-TKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGR 159
Query: 106 R 106
R
Sbjct: 160 R 160
>TAIR|locus:2030006 [details] [associations]
symbol:AT1G29160 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC021043 HOGENOM:HOG000090574 ProtClustDB:CLSN2679679
EMBL:BT029990 IPI:IPI00521362 RefSeq:NP_174211.1 UniGene:At.64845
EnsemblPlants:AT1G29160.1 GeneID:839790 KEGG:ath:AT1G29160
GeneFarm:4458 TAIR:At1g29160 eggNOG:NOG279976 InParanoid:P68350
OMA:LRCYTDG PhylomeDB:P68350 ArrayExpress:P68350
Genevestigator:P68350 GermOnline:AT1G29160 Uniprot:P68350
Length = 175
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 41/76 (53%), Positives = 51/76 (67%)
Query: 31 SPSGDMLTCSRPLMERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYW 90
SPS D+ RP D+ + CPRC S TKFCY+NNY+++QPR+FCK C+RYW
Sbjct: 47 SPSSDLTAEKRP----------DKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYW 96
Query: 91 TKGGTLRNIPVGGGCR 106
T GG LRN+PVG G R
Sbjct: 97 TAGGALRNVPVGAGRR 112
>TAIR|locus:2055506 [details] [associations]
symbol:AT2G34140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR003851
Pfam:PF02701 ProDom:PD007478 PROSITE:PS01361 PROSITE:PS50884
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
EMBL:AC002341 EMBL:BT010496 EMBL:AK221308 IPI:IPI00538613
PIR:H84752 RefSeq:NP_180961.1 UniGene:At.43132
EnsemblPlants:AT2G34140.1 GeneID:817975 KEGG:ath:AT2G34140
GeneFarm:4463 TAIR:At2g34140 eggNOG:NOG326560 HOGENOM:HOG000090574
InParanoid:O22967 OMA:IACPRCK PhylomeDB:O22967
ProtClustDB:CLSN2679679 Genevestigator:O22967 GermOnline:AT2G34140
Uniprot:O22967
Length = 170
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 37/58 (63%), Positives = 45/58 (77%)
Query: 49 RPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCR 106
RP D+ + CPRC S TKFCY+NNY+++QPR+FCK C RYWT GG LRN+PVG G R
Sbjct: 53 RP--DKIIACPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRR 108
>TAIR|locus:2133149 [details] [associations]
symbol:ATDOF4.2 "AT4G21030" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010214 "seed coat development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0048359 "mucilage metabolic process involved seed coat
development" evidence=IMP] [GO:0048825 "cotyledon development"
evidence=IMP] [GO:2000032 "regulation of secondary shoot formation"
evidence=IMP] InterPro:IPR003851 Pfam:PF02701 ProDom:PD007478
PROSITE:PS01361 PROSITE:PS50884 GO:GO:0005634 GO:GO:0045893
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0048825 EMBL:AB493687 IPI:IPI00542373
PIR:T10645 RefSeq:NP_193835.1 UniGene:At.54449
EnsemblPlants:AT4G21030.1 GeneID:827850 KEGG:ath:AT4G21030
GeneFarm:4467 TAIR:At4g21030 eggNOG:NOG254967 HOGENOM:HOG000097076
OMA:QPRYKCK PhylomeDB:Q9SUB1 ProtClustDB:CLSN2685338
Genevestigator:Q9SUB1 GO:GO:0048359 GO:GO:2000032 Uniprot:Q9SUB1
Length = 194
Score = 174 (66.3 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 31/48 (64%), Positives = 33/48 (68%)
Query: 58 CPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGC 105
CPRC S T+F Y+NN SQPRY CK C R WT GG LRNIPV G C
Sbjct: 23 CPRCYSDQTRFSYFNNNKKSQPRYKCKNCCRCWTHGGVLRNIPVTGIC 70
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 310 284 0.00085 115 3 11 22 0.39 34
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 623 (66 KB)
Total size of DFA: 250 KB (2133 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.98u 0.23s 23.21t Elapsed: 00:00:01
Total cpu time: 22.98u 0.23s 23.21t Elapsed: 00:00:01
Start: Fri May 10 04:20:09 2013 End: Fri May 10 04:20:10 2013