BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021633
(310 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FM03|DOF56_ARATH Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6
PE=2 SV=2
Length = 372
Score = 212 bits (540), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 170/394 (43%), Positives = 212/394 (53%), Gaps = 107/394 (27%)
Query: 2 MGLTSLQVCMDSSDWLQGSIHEESG---LDSS--SPSG-DMLTC--SRP----------- 42
MGLTSLQVCMDS DWLQ S E SG LDSS SPS D+L +RP
Sbjct: 1 MGLTSLQVCMDS-DWLQES--ESSGGSMLDSSTNSPSAADILAACSTRPQASAVAVAAAA 57
Query: 43 LME--RRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIP 100
LM+ RRLRPPHD KCPRC+STHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIP
Sbjct: 58 LMDGGRRLRPPHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIP 117
Query: 101 VGGGCRKNKK-------------------VSSKKSNDQSMNQNPGSSSHNPTDLQLSFPE 141
VGGGCRKNKK V++ S+ ++ + + H+P
Sbjct: 118 VGGGCRKNKKPSSSNSSSSTSSGKKPSNIVTANTSDLMALAHSHQNYQHSP--------- 168
Query: 142 MQFSHLGNILGAHGTLAN-NHNFMDNKYSAML-ENPRPIDFMENKLEAIVGSSRNYDFMG 199
+ FSH G ++G++ T + N F+++KY +L ++PRPIDF+++K +D MG
Sbjct: 169 LGFSHFGGMMGSYSTPEHGNVGFLESKYGGLLSQSPRPIDFLDSK----------FDLMG 218
Query: 200 -NNGDMGMVGGLGNLSHHHQEGLTPNVHNLCSPFGMSLDGTGGTF-------------ID 245
NN ++ MV N HHH +++ + +G I
Sbjct: 219 VNNDNLVMVNHGSNGDHHHHHNHHMGLNHGVGLNNNNNNGGFNGISTGGNGNGGGLMDIS 278
Query: 246 GCQRIMLP----------YDANEVQNAIDVKPNAKLLSLDWQDQSC-------------- 281
CQR+ML D V +DVKPN KLLSLDWQ C
Sbjct: 279 TCQRLMLSNYDHHHYNHQEDHQRVATIMDVKPNPKLLSLDWQQDQCYSNGGGSGGAGKSD 338
Query: 282 ----SDVGYLGNLGSSWSGMMNGYGSST-TNSLV 310
+ GY+ LGSSW+G+MNGYG+ST TNSLV
Sbjct: 339 GGGYGNGGYINGLGSSWNGLMNGYGTSTKTNSLV 372
>sp|Q84TE9|DOF53_ARATH Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3
PE=2 SV=1
Length = 257
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 88/133 (66%), Gaps = 21/133 (15%)
Query: 47 RLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCR 106
R +PP + AL+CPRCDST+TKFCYYNNYSL+QPRYFCK+CRRYWTKGGTLRNIPVGGGCR
Sbjct: 47 RPQPP-ELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCR 105
Query: 107 KNKKVSSKKSNDQSMNQNPGSSSHN----------------PTDLQLSFPEMQFSHLGNI 150
KNK+ +S S +S+ P +SH+ DL L+F + H G+
Sbjct: 106 KNKRSTS--SAARSLRTTPEPASHDGKVFSAAGFNGYSNNEHIDLSLAFALLNKQHPGSS 163
Query: 151 --LGAHGTLANNH 161
LG H L ++H
Sbjct: 164 SQLGFHSELGSSH 176
>sp|O24463|PBF_MAIZE Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=1 SV=1
Length = 328
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 53/68 (77%), Positives = 59/68 (86%)
Query: 45 ERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGG 104
ER+ RP +ALKCPRCDS +TKFCYYNNYS+SQPRYFCK CRRYWT GGTLRN+P+GGG
Sbjct: 49 ERKPRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGG 108
Query: 105 CRKNKKVS 112
CRKNK S
Sbjct: 109 CRKNKHAS 116
>sp|Q9M1E6|DOF32_ARATH Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana GN=DOF3.2
PE=2 SV=1
Length = 245
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 105/199 (52%), Gaps = 26/199 (13%)
Query: 20 SIHEESGLDSSSPSGDMLTCSRPLMERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQP 79
S+H+ SS + D +PL R PP +Q+L+CPRCDST+TKFCYYNNYSLSQP
Sbjct: 5 SMHQNVMGVSSCSTQDYQNQKKPLSATRPAPP-EQSLRCPRCDSTNTKFCYYNNYSLSQP 63
Query: 80 RYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSSKKSNDQSMNQNPGSSSHNPTDLQLSF 139
RYFCK+CRRYWTKGG LRNIP+GG RK+K+ SS +S+ P + T SF
Sbjct: 64 RYFCKSCRRYWTKGGILRNIPIGGAYRKHKRSSSA---TKSLRTTPEPTM---THDGKSF 117
Query: 140 PEMQFSHLGNILGAHGTLANNHNFMDNKYSAMLENPRPIDFMENKLEAIVGSSRNYDFMG 199
P F + N ++N + Y+ + + P +G S + F
Sbjct: 118 PTASFGYNNN------NISNEQMELGLAYALLNKQP-------------LGVSSHLGFGS 158
Query: 200 NNGDMGMVGGLGNLSHHHQ 218
+ M M G G SH +
Sbjct: 159 SQSPMAMDGVYGTTSHQME 177
>sp|Q8LAP8|DOF46_ARATH Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6
PE=2 SV=2
Length = 342
Score = 125 bits (313), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 52/66 (78%), Positives = 60/66 (90%)
Query: 45 ERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGG 104
ER+ RP DQA+ CPRC+ST+TKFCYYNNYSL+QPRYFCK CRRYWT+GG+LRNIPVGGG
Sbjct: 42 ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGG 101
Query: 105 CRKNKK 110
RKNK+
Sbjct: 102 SRKNKR 107
>sp|Q8LE43|DOF21_ARATH Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana GN=DOF2.1
PE=2 SV=2
Length = 288
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 74/112 (66%), Gaps = 18/112 (16%)
Query: 54 QALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSS 113
+A CPRC+S +TKFCYYNNYSLSQPRYFCK+CRRYWTKGGTLRN+PVGGGCR+NK+ SS
Sbjct: 46 EAQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSS 105
Query: 114 KKSNDQSMN----------QNPGSSSHNPT--------DLQLSFPEMQFSHL 147
+ + N QNP + P+ DL L+F +Q HL
Sbjct: 106 SAFSKNNNNKSINFHTDPLQNPLITGMPPSSFGYDHSIDLNLAFATLQKHHL 157
>sp|Q8LDR0|DOF54_ARATH Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4
PE=2 SV=2
Length = 307
Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 66/90 (73%), Gaps = 6/90 (6%)
Query: 45 ERRLRPP------HDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRN 98
+RR+R H Q+LKCPRC+S +TKFCYYNNY+LSQPR+FCK CRRYWTKGG LRN
Sbjct: 34 DRRMRAHQNNILNHHQSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRN 93
Query: 99 IPVGGGCRKNKKVSSKKSNDQSMNQNPGSS 128
+PVGGGCRK K+ +K+ S P ++
Sbjct: 94 VPVGGGCRKAKRSKTKQVPSSSSADKPTTT 123
>sp|O80928|DOF24_ARATH Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4
PE=2 SV=1
Length = 330
Score = 117 bits (294), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 45/59 (76%), Positives = 56/59 (94%)
Query: 53 DQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKV 111
+ ALKCPRC+ST+TKFCY+NNYSL+QPR+FCKTCRRYWT+GG LRN+PVGGGCR+N++
Sbjct: 86 EAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNRRT 144
>sp|Q9M2U1|DOF36_ARATH Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana GN=DOF3.6
PE=1 SV=2
Length = 323
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 47/65 (72%), Positives = 58/65 (89%)
Query: 50 PPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNK 109
P + AL CPRCDST+TKFCY+NNYSL+QPR+FCKTCRRYWT+GG+LRN+PVGGG R+NK
Sbjct: 70 PLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFRRNK 129
Query: 110 KVSSK 114
+ S+
Sbjct: 130 RSKSR 134
>sp|Q84JQ8|DOF18_ARATH Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8
PE=2 SV=1
Length = 352
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 54/62 (87%)
Query: 44 MERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGG 103
+ER+ RP DQAL CPRC+S +TKFCYYNNYSL+QPRYFCK CRRYWT GG+LRNIPVGG
Sbjct: 37 VERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGG 96
Query: 104 GC 105
G
Sbjct: 97 GV 98
>sp|Q8L9V6|DOF11_ARATH Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1
PE=1 SV=2
Length = 331
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 57/71 (80%), Gaps = 4/71 (5%)
Query: 44 MERRLR----PPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNI 99
M R R PP LKCPRCDS++TKFCYYNNY+L+QPR+FCK CRRYWT+GG LRN+
Sbjct: 61 MAERARQANIPPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNV 120
Query: 100 PVGGGCRKNKK 110
PVGGGCR+N K
Sbjct: 121 PVGGGCRRNNK 131
>sp|Q9LZ56|DOF51_ARATH Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana GN=DOF5.1
PE=2 SV=1
Length = 399
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 59/71 (83%), Gaps = 4/71 (5%)
Query: 44 MERRLR----PPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNI 99
M R R P + ALKCPRCDST+TKFCY+NNYSL+QPR+FCK CRRYWT+GG LR++
Sbjct: 79 MAERARLANIPLPETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSV 138
Query: 100 PVGGGCRKNKK 110
PVGGGCR+NK+
Sbjct: 139 PVGGGCRRNKR 149
>sp|Q9ZV33|DOF22_ARATH Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana GN=DOF2.2
PE=2 SV=2
Length = 340
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 3/81 (3%)
Query: 27 LDSSSPSGDMLTCSRPLMERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTC 86
+D SS +G R + + +PP + ALKCPRCDS +TKFCY+NNY+L+QPR+FCK C
Sbjct: 68 VDPSSLNGQ--AAERARLAKNSQPP-EGALKCPRCDSANTKFCYFNNYNLTQPRHFCKAC 124
Query: 87 RRYWTKGGTLRNIPVGGGCRK 107
RRYWT+GG LRN+PVGGGCR+
Sbjct: 125 RRYWTRGGALRNVPVGGGCRR 145
>sp|Q43385|DOF37_ARATH Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7
PE=1 SV=2
Length = 296
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/111 (56%), Positives = 76/111 (68%), Gaps = 12/111 (10%)
Query: 46 RRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGC 105
R+ RP + + CPRC+ST+TKFCYYNNYSL+QPRYFCK CRRYWT+GG+LRN+PVGG
Sbjct: 66 RKARP--QEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSS 123
Query: 106 RKNKKVSS---KKSNDQSMNQNPGS--SSHNP----TDLQ-LSFPEMQFSH 146
RKNK+ S+ SN + + NP SS P DL LSFP MQ H
Sbjct: 124 RKNKRSSTPLASPSNPKLPDLNPPILFSSQIPNKSNKDLNLLSFPVMQDHH 174
>sp|Q9LSL6|DOF57_ARATH Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7
PE=2 SV=1
Length = 316
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 53/57 (92%)
Query: 54 QALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKK 110
Q LKCPRC+S +TKFCYYNNYSLSQPR+FCK+CRRYWT+GG LRN+P+GGGCRK KK
Sbjct: 39 QNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRKTKK 95
>sp|O82155|DOF17_ARATH Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana GN=DOF1.7
PE=2 SV=1
Length = 194
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 56/73 (76%)
Query: 51 PHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKK 110
P + LKCPRCDS +TKFCYYNNY+LSQPR+FCK CRRYWTKGG LRNIPVGGG RK+ K
Sbjct: 28 PEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSNK 87
Query: 111 VSSKKSNDQSMNQ 123
S + NQ
Sbjct: 88 RSGSSPSSNLKNQ 100
>sp|Q9FZA4|DOF14_ARATH Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana GN=DOF1.4
PE=2 SV=1
Length = 311
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 46/56 (82%), Positives = 53/56 (94%)
Query: 56 LKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKV 111
LKCPRCDS++TKFCYYNNYSLSQPR+FCK C+RYWT+GGTLRN+PVGG RKNK+V
Sbjct: 27 LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGSYRKNKRV 82
>sp|Q9SVC5|DOF35_ARATH Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5
PE=3 SV=1
Length = 247
Score = 111 bits (277), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 64/87 (73%), Gaps = 6/87 (6%)
Query: 58 CPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSSKKSN 117
CPRC S++TKFCYYNNYSL+QPRYFCK CRRYWTKGG+LRN+PVGGGCRK+++ S N
Sbjct: 27 CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRPKSSSGN 86
Query: 118 DQSMNQ-----NPGSSSHNPTDLQLSF 139
+ + NPG S + DL L +
Sbjct: 87 NTKTSLTANSGNPGGGSPS-IDLALVY 112
>sp|P68349|DOF12_ARATH Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2
PE=2 SV=1
Length = 260
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 55 ALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSSK 114
A CPRC S++TKFCYYNNYSLSQPRYFCK CRRYWTKGG+LRNIPVGGGCRK +
Sbjct: 37 APACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGGCRKRSRSRQN 96
Query: 115 KSNDQSMNQNPGSSSHNPTDLQLSFPEMQFSHLGNILGAHGTLANNHNFMDNKYSAMLEN 174
N+N N D S P L + + T + + DN + +
Sbjct: 97 SHKRFGRNENRPDGLINQDDGFQSSPPGSDIDLAAVFAQYVT-DRSPSSTDNTTGS--DQ 153
Query: 175 PRPIDFMENKLEAIVGSSRNYDF-MGNNGDMGMVGGLGNLSHHHQE 219
PI + LE++ ++D + D+G G NL+ +E
Sbjct: 154 DSPITTTTHALESL-----SWDICQETDVDLGFYGEFNNLTQKTKE 194
>sp|Q9ZPY0|DOF25_ARATH Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana GN=DOF2.5
PE=2 SV=3
Length = 369
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 44/61 (72%), Positives = 53/61 (86%), Gaps = 2/61 (3%)
Query: 43 LMERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVG 102
+ ER+ RP + L CPRC+ST+TKFCYYNNYSL+QPRYFCK CRRYWT+GG+LRN+PVG
Sbjct: 69 VAERKARP--QEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVG 126
Query: 103 G 103
G
Sbjct: 127 G 127
>sp|Q9SUA9|DOF44_ARATH Dof zinc finger protein DOF4.4 OS=Arabidopsis thaliana GN=DOF4.4
PE=3 SV=1
Length = 210
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Query: 49 RPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKN 108
RPP + CPRCDS +TKFC+YNNYS SQPRYFCK CRRYWT GG LRNIPVGG CRK
Sbjct: 19 RPPPSRV--CPRCDSDNTKFCFYNNYSESQPRYFCKNCRRYWTHGGALRNIPVGGSCRKP 76
Query: 109 KKVSSKKSNDQSM 121
K++ +S+ M
Sbjct: 77 KRLKVDQSSISEM 89
>sp|Q94AR6|DOF31_ARATH Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1
PE=2 SV=2
Length = 204
Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 45/53 (84%), Positives = 50/53 (94%)
Query: 56 LKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKN 108
LKCPRCDS +TKFCYYNNY+LSQPR+FCK+CRRYWTKGG LRN+PVGGG RKN
Sbjct: 29 LKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKN 81
>sp|Q9M161|DOF41_ARATH Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana GN=DOF4.1
PE=2 SV=2
Length = 294
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 52/54 (96%)
Query: 58 CPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKV 111
CPRC+S++TKFCYYNNYSL+QPRY CK+CRRYWT+GG+LRN+PVGGG RKNKK+
Sbjct: 70 CPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKKL 123
>sp|Q84K52|DOF47_ARATH Dof zinc finger protein DOF4.7 OS=Arabidopsis thaliana GN=DOF4.7
PE=2 SV=1
Length = 246
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 41 RPLMERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIP 100
R + + P LKCPRCDS +TKFCYYNNYSLSQPR++CK CRRYWT+GG LRN+P
Sbjct: 26 RQINNKEPSPATQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVP 85
Query: 101 VGGGCR-KNKKVS 112
+GG R KNK S
Sbjct: 86 IGGSTRNKNKPCS 98
>sp|Q39088|DOF34_ARATH Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana GN=DOF3.4
PE=1 SV=2
Length = 253
Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 51/61 (83%)
Query: 52 HDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKV 111
+ L CPRCDS++TKFCYYNNY+ SQPR+FCK CRRYWT GGTLR++PVGGG RK+ K
Sbjct: 26 QQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTRKSAKR 85
Query: 112 S 112
S
Sbjct: 86 S 86
>sp|Q93ZL5|CDF2_ARATH Cyclic dof factor 2 OS=Arabidopsis thaliana GN=CDF2 PE=1 SV=2
Length = 457
Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Query: 44 MERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGG 103
E +L+ P D+ L CPRC+S TKFCYYNNY+++QPR+FCK C+RYWT GGT+RN+PVG
Sbjct: 127 QEGKLKKP-DKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGA 185
Query: 104 GCRKNKKVSSKKSNDQSMNQNPGSSSHNPTDLQ 136
G RKNK +S + S+ TDLQ
Sbjct: 186 GRRKNKSPASHYNRHVSITSAEAMQKVARTDLQ 218
>sp|Q9FGD6|DOF58_ARATH Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana GN=DOF5.8
PE=2 SV=1
Length = 225
Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 55/69 (79%), Gaps = 2/69 (2%)
Query: 51 PHDQA--LKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKN 108
P DQ L CPRC+ST+TKFCYYNNY+ SQPR+FCK+CRRYWT GGTLR+IPVGG RK+
Sbjct: 25 PTDQQEQLSCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSRKS 84
Query: 109 KKVSSKKSN 117
K S S+
Sbjct: 85 SKRSRTYSS 93
>sp|Q8W1E3|CDF1_ARATH Cyclic dof factor 1 OS=Arabidopsis thaliana GN=CDF1 PE=1 SV=2
Length = 298
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 79/130 (60%), Gaps = 19/130 (14%)
Query: 45 ERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGG 104
++ L+ P + L CPRC+S TKFCYYNNY+++QPR+FCK C+RYWT GGT+R++P+G G
Sbjct: 44 DKTLKKP-TKILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAG 102
Query: 105 CRKNKKVSSKKSNDQSMNQNPGSSSHNPTDLQLSFPEMQFSHLGNILGAHGTLANNHNFM 164
RKNK N +P S H+ T + + P + FS LG +++N F
Sbjct: 103 RRKNK------------NNSPTSHYHHVTISETNGPVLSFS-----LGDDQKVSSNR-FG 144
Query: 165 DNKYSAMLEN 174
+ K A +EN
Sbjct: 145 NQKLVARIEN 154
>sp|Q8LFV3|CDF3_ARATH Cyclic dof factor 3 OS=Arabidopsis thaliana GN=CDF3 PE=1 SV=2
Length = 448
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 49/60 (81%)
Query: 54 QALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSS 113
+ L CPRC S TKFCYYNNY+++QPR+FCK C+RYWT GGT+RN+PVG G RKNK SS
Sbjct: 108 KILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKSSSS 167
>sp|Q9SEZ3|CDF5_ARATH Cyclic dof factor 5 OS=Arabidopsis thaliana GN=CDF5 PE=2 SV=1
Length = 399
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 50/57 (87%)
Query: 53 DQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNK 109
D+ + CPRC+S +TKFCYYNNY+++QPRYFC+ C+RYWT GG++RN+PVG G RKNK
Sbjct: 129 DKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKNK 185
>sp|Q9SX97|DOF16_ARATH Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana GN=DOF1.6
PE=2 SV=1
Length = 209
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 55/75 (73%)
Query: 30 SSPSGDMLTCSRPLMERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRY 89
S P+ T +P P + L CPRC+ST TKFCYYNNY+L+QPRY+CK+CRRY
Sbjct: 3 SEPNQTRPTRVQPSTAAYPPPNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCRRY 62
Query: 90 WTKGGTLRNIPVGGG 104
WT+GGTLR++PVGGG
Sbjct: 63 WTQGGTLRDVPVGGG 77
>sp|P38564|MNB1A_MAIZE Dof zinc finger protein MNB1A OS=Zea mays GN=MNB1A PE=1 SV=2
Length = 238
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 41/51 (80%), Positives = 44/51 (86%)
Query: 58 CPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKN 108
CPRC S TKFCYYNNY+ SQPR+FCK CRRYWTKGGTLRN+PVGGG RK
Sbjct: 49 CPRCASRDTKFCYYNNYNTSQPRHFCKGCRRYWTKGGTLRNVPVGGGTRKK 99
>sp|P68350|DOF15_ARATH Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana GN=DOF1.5
PE=1 SV=1
Length = 175
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 54/79 (68%), Gaps = 10/79 (12%)
Query: 31 SPSGDMLTCSRPLMERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYW 90
SPS D+ RP D+ + CPRC S TKFCY+NNY+++QPR+FCK C+RYW
Sbjct: 47 SPSSDLTAEKRP----------DKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYW 96
Query: 91 TKGGTLRNIPVGGGCRKNK 109
T GG LRN+PVG G RK+K
Sbjct: 97 TAGGALRNVPVGAGRRKSK 115
>sp|Q9LQX4|DOF13_ARATH Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana GN=DOF1.3
PE=2 SV=1
Length = 366
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 48/57 (84%)
Query: 53 DQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNK 109
D+ L CPRC+S TKFCYYNNY+++QPR+FC+ C+RYWT GG++R +PVG G RKNK
Sbjct: 102 DKILPCPRCNSADTKFCYYNNYNVNQPRHFCRKCQRYWTAGGSMRIVPVGSGRRKNK 158
>sp|O22967|CDF4_ARATH Cyclic dof factor 4 OS=Arabidopsis thaliana GN=CDF4 PE=2 SV=1
Length = 170
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 53/80 (66%), Gaps = 10/80 (12%)
Query: 30 SSPSGDMLTCSRPLMERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRY 89
SS S D+ RP D+ + CPRC S TKFCY+NNY+++QPR+FCK C RY
Sbjct: 42 SSSSSDLTAEKRP----------DKIIACPRCKSMETKFCYFNNYNVNQPRHFCKGCHRY 91
Query: 90 WTKGGTLRNIPVGGGCRKNK 109
WT GG LRN+PVG G RK+K
Sbjct: 92 WTAGGALRNVPVGAGRRKSK 111
>sp|Q9SUB0|DOF43_ARATH Dof zinc finger protein DOF4.3 OS=Arabidopsis thaliana GN=DOF4.3
PE=3 SV=1
Length = 232
Score = 94.7 bits (234), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 50/75 (66%)
Query: 58 CPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSSKKSN 117
C RCDS +TKFCYYNNYS QPRYFCK CRRYWT GG LRN+P+GG R + ++ S
Sbjct: 27 CARCDSDNTKFCYYNNYSEFQPRYFCKNCRRYWTHGGALRNVPIGGSSRAKRTRINQPSV 86
Query: 118 DQSMNQNPGSSSHNP 132
Q ++ SH P
Sbjct: 87 AQMVSVGIQPGSHKP 101
>sp|O49550|DOF45_ARATH Dof zinc finger protein DOF4.5 OS=Arabidopsis thaliana GN=DOF4.5
PE=3 SV=1
Length = 249
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 40/52 (76%)
Query: 58 CPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNK 109
C RCDS +TKFCYYNNY QPRYFCK CRRYWT GG LRNIP+GG R +
Sbjct: 27 CARCDSDNTKFCYYNNYCEFQPRYFCKNCRRYWTHGGALRNIPIGGSSRAKR 78
>sp|Q9SUB1|DOF42_ARATH Dof zinc finger protein DOF4.2 OS=Arabidopsis thaliana GN=DOF4.2
PE=3 SV=1
Length = 194
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 34/50 (68%)
Query: 58 CPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRK 107
CPRC S T+F Y+NN SQPRY CK C R WT GG LRNIPV G C K
Sbjct: 23 CPRCYSDQTRFSYFNNNKKSQPRYKCKNCCRCWTHGGVLRNIPVTGICDK 72
>sp|Q9V4T5|CP4E1_DROME Probable cytochrome P450 4e1 OS=Drosophila melanogaster GN=Cyp4e1
PE=2 SV=1
Length = 531
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 159 NNHNFMDNKYS-AMLENPRPIDFMENKLEAIVGSSRNYDFMGNNGDMGMVGGLGNLSHHH 217
+N + YS M+ NP+ ++F+ + + ++ S YD +G++ G+ H H
Sbjct: 69 DNFRYWIGYYSNIMVTNPKYMEFILSS-QTLISKSDVYDLTHPWLGLGLLTSTGSKWHKH 127
Query: 218 QEGLTPNVH-NLCSPFGMSLDGTGGTFIDGCQRIMLPYDANEVQNAIDVKPNAKLLSLD 275
++ +TP H N+ F ++ FID +++ + N D + A L+LD
Sbjct: 128 RKMITPAFHFNILQDFHEVMNENSTKFIDQLKKV------ADGGNIFDFQEEAHYLTLD 180
>sp|Q9VL92|CP4E3_DROME Cytochrome P450 4e3 OS=Drosophila melanogaster GN=Cyp4e3 PE=2 SV=1
Length = 526
Score = 35.8 bits (81), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 171 MLENPRPIDFMENKLEAIVGSSRNYDFMGNNGDMGMVGGLGNLSHHHQEGLTPNVH-NLC 229
++ NP+ ++++ N + ++ S YD + G++ G+ H H++ +TP+ H N+
Sbjct: 82 VMTNPKQLEYILNS-QQLIQKSTIYDLLHPWLGHGLLTSFGSKWHKHRKMITPSFHFNIL 140
Query: 230 SPFGMSLDGTGGTFIDGCQRIMLPYDANEVQNAIDVKPNAKLLSLD 275
F ++ F+ ++ A+ ID + +A L+LD
Sbjct: 141 QDFHEVMNENSAKFMTQLKK------ASAGDTIIDFQEHANYLTLD 180
>sp|Q6UXM1|LRIG3_HUMAN Leucine-rich repeats and immunoglobulin-like domains protein 3
OS=Homo sapiens GN=LRIG3 PE=2 SV=1
Length = 1119
Score = 34.7 bits (78), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 75/190 (39%), Gaps = 33/190 (17%)
Query: 18 QGSIHEESGLDSSSPS-------GDMLTCSRPLMERRLRPPHDQALKCPRCDSTHTKFCY 70
+G + + SG+ + P GD+L CSR +R R P R D +H + +
Sbjct: 32 RGELGQPSGVAAERPCPTTCRCLGDLLDCSR---KRLARLPEPLPSWVARLDLSHNRLSF 88
Query: 71 YNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSSKKSND------------ 118
S+S ++ R L IP G N + S N
Sbjct: 89 IKASSMSH----LQSLREVKLNNNELETIPNLGPVSANITLLSLAGNRIVEILPEHLKEF 144
Query: 119 QSMNQNPGSSSHNPTDLQLSFPEMQFSHLGNILGAHGTLANNHNFMDNKYSAMLENPRPI 178
QS+ + SS+N ++LQ +FP +Q +L L ++ + + DN + +L +
Sbjct: 145 QSL-ETLDLSSNNISELQTAFPALQLKYL--YLNSNRVTSMEPGYFDNLANTLLV----L 197
Query: 179 DFMENKLEAI 188
N++ AI
Sbjct: 198 KLNRNRISAI 207
>sp|Q88SF0|GALT_LACPL Galactose-1-phosphate uridylyltransferase OS=Lactobacillus
plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1)
GN=galT PE=3 SV=1
Length = 487
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 159 NNHN-FMDNKYSAMLENPRPIDFMENKLEAIVGSSRNYDFMGNNGDMGMVGGLGNLSHHH 217
N H+ F+D ++ M+ N + N LE IV +Y F+G+N D+ +VGG LSH H
Sbjct: 212 NEHSIFLDQEHRPMVINRQT---FTNLLE-IVQQFPHY-FVGSNADLPIVGG-SMLSHEH 265
Query: 218 QEGLTPNVHNLCSPFGMSLD-GTGGT 242
+G + +P ++D G G
Sbjct: 266 YQGGRHEFPMMKAPIARTIDLGIAGV 291
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,191,022
Number of Sequences: 539616
Number of extensions: 5639973
Number of successful extensions: 13113
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 13051
Number of HSP's gapped (non-prelim): 67
length of query: 310
length of database: 191,569,459
effective HSP length: 117
effective length of query: 193
effective length of database: 128,434,387
effective search space: 24787836691
effective search space used: 24787836691
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)