Query 021634
Match_columns 310
No_of_seqs 281 out of 1724
Neff 11.0
Searched_HMMs 46136
Date Fri Mar 29 04:30:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021634.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021634hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 2.1E-35 4.6E-40 252.7 27.4 300 3-309 35-342 (485)
2 TIGR00887 2A0109 phosphate:H+ 100.0 1.8E-32 3.8E-37 244.2 22.8 280 26-308 51-371 (502)
3 TIGR01299 synapt_SV2 synaptic 100.0 1.8E-31 3.9E-36 242.3 27.7 243 20-264 191-474 (742)
4 PRK10077 xylE D-xylose transpo 100.0 6.5E-31 1.4E-35 233.4 30.1 282 21-309 45-343 (479)
5 KOG0254 Predicted transporter 100.0 3.9E-31 8.3E-36 235.7 25.6 273 31-309 89-366 (513)
6 TIGR02332 HpaX 4-hydroxyphenyl 100.0 2.1E-30 4.5E-35 225.2 25.3 273 20-304 32-311 (412)
7 PRK10642 proline/glycine betai 100.0 3.9E-30 8.4E-35 228.4 24.3 263 20-308 40-322 (490)
8 TIGR00898 2A0119 cation transp 100.0 2.5E-30 5.4E-35 231.0 22.3 274 19-308 112-391 (505)
9 TIGR00879 SP MFS transporter, 100.0 8.2E-29 1.8E-33 219.6 26.7 275 28-308 68-355 (481)
10 COG2814 AraJ Arabinose efflux 100.0 1E-29 2.2E-34 211.7 19.4 244 19-307 36-281 (394)
11 COG2271 UhpC Sugar phosphate p 100.0 1.1E-29 2.4E-34 209.1 18.4 266 19-306 52-324 (448)
12 TIGR00891 2A0112 putative sial 100.0 1.3E-28 2.7E-33 214.0 25.7 274 20-308 36-310 (405)
13 PF00083 Sugar_tr: Sugar (and 100.0 9.7E-35 2.1E-39 255.9 -14.0 276 29-309 44-323 (451)
14 PRK10406 alpha-ketoglutarate t 100.0 1.5E-28 3.2E-33 215.2 25.1 249 20-307 46-314 (432)
15 PRK12307 putative sialic acid 100.0 2.5E-28 5.3E-33 213.7 23.8 262 19-308 41-302 (426)
16 TIGR00903 2A0129 major facilit 100.0 1.9E-28 4.1E-33 209.0 21.5 239 19-302 14-253 (368)
17 PRK09705 cynX putative cyanate 100.0 3E-28 6.4E-33 210.6 22.6 244 19-308 32-276 (393)
18 PRK09556 uhpT sugar phosphate 100.0 5.2E-29 1.1E-33 220.1 18.2 270 19-307 52-329 (467)
19 PRK11551 putative 3-hydroxyphe 100.0 1.1E-27 2.3E-32 208.4 24.6 253 19-308 38-291 (406)
20 KOG2532 Permease of the major 100.0 5.2E-28 1.1E-32 209.5 21.6 256 23-302 65-324 (466)
21 PRK09952 shikimate transporter 100.0 1.5E-27 3.3E-32 208.9 24.4 247 27-308 56-322 (438)
22 PRK14995 methyl viologen resis 100.0 5.3E-28 1.2E-32 214.9 21.2 281 19-309 29-332 (495)
23 PRK11663 regulatory protein Uh 100.0 1.5E-27 3.2E-32 209.0 23.0 258 19-299 46-306 (434)
24 PRK15075 citrate-proton sympor 100.0 2.4E-27 5.1E-32 207.7 24.0 253 19-308 38-310 (434)
25 PRK03545 putative arabinose tr 100.0 1.2E-27 2.7E-32 206.8 20.7 242 19-306 32-275 (390)
26 TIGR00895 2A0115 benzoate tran 100.0 3.1E-27 6.8E-32 204.7 23.0 279 19-306 40-319 (398)
27 TIGR00893 2A0114 d-galactonate 100.0 9.5E-28 2.1E-32 207.6 19.6 264 19-303 17-282 (399)
28 TIGR00894 2A0114euk Na(+)-depe 100.0 4E-27 8.6E-32 208.3 22.4 256 24-303 69-328 (465)
29 PRK03699 putative transporter; 100.0 2E-26 4.3E-31 199.5 24.3 245 20-307 31-276 (394)
30 TIGR00890 2A0111 Oxalate/Forma 100.0 5.3E-27 1.1E-31 201.8 20.5 250 19-308 26-276 (377)
31 TIGR00881 2A0104 phosphoglycer 100.0 3E-27 6.5E-32 203.4 17.4 258 20-300 19-280 (379)
32 PRK10091 MFS transport protein 100.0 9.3E-27 2E-31 200.8 20.2 243 20-308 27-271 (382)
33 PRK10213 nepI ribonucleoside t 100.0 1.8E-26 3.9E-31 199.4 21.9 239 19-303 43-283 (394)
34 TIGR00711 efflux_EmrB drug res 100.0 3.8E-27 8.3E-32 209.6 18.0 280 19-309 25-328 (485)
35 KOG1330 Sugar transporter/spin 100.0 3E-29 6.4E-34 208.5 4.0 251 20-301 57-312 (493)
36 TIGR00710 efflux_Bcr_CflA drug 100.0 1.4E-26 3E-31 200.0 20.1 249 19-308 28-278 (385)
37 PLN00028 nitrate transmembrane 100.0 1.2E-26 2.6E-31 205.1 19.9 251 20-302 60-318 (476)
38 PRK11102 bicyclomycin/multidru 99.9 3.6E-26 7.8E-31 196.9 21.9 250 20-308 15-266 (377)
39 PF07690 MFS_1: Major Facilita 99.9 9.2E-27 2E-31 198.5 18.1 253 21-307 22-278 (352)
40 KOG2533 Permease of the major 99.9 1E-26 2.3E-31 201.9 18.3 269 20-306 70-347 (495)
41 TIGR00886 2A0108 nitrite extru 99.9 1.5E-26 3.2E-31 198.5 18.9 259 21-307 27-296 (366)
42 PRK15403 multidrug efflux syst 99.9 3.9E-26 8.5E-31 198.5 20.8 242 20-301 40-283 (413)
43 PRK15402 multidrug efflux syst 99.9 6.7E-26 1.4E-30 197.1 21.6 249 20-308 37-287 (406)
44 PRK10473 multidrug efflux syst 99.9 1E-25 2.2E-30 195.1 21.9 249 19-309 26-276 (392)
45 PRK03893 putative sialic acid 99.9 3.4E-25 7.4E-30 197.6 25.7 283 20-308 44-347 (496)
46 TIGR00900 2A0121 H+ Antiporter 99.9 1.5E-25 3.2E-30 192.0 21.9 252 20-308 23-283 (365)
47 KOG0255 Synaptic vesicle trans 99.9 4E-25 8.6E-30 198.1 25.1 269 24-308 111-386 (521)
48 PRK11273 glpT sn-glycerol-3-ph 99.9 1.9E-25 4.1E-30 196.7 22.5 260 20-303 53-322 (452)
49 PRK10133 L-fucose transporter; 99.9 3.2E-25 6.9E-30 193.8 22.7 253 19-308 49-331 (438)
50 PRK11043 putative transporter; 99.9 2.8E-25 6.1E-30 192.9 20.8 242 20-305 30-271 (401)
51 TIGR00883 2A0106 metabolite-pr 99.9 1.2E-24 2.7E-29 188.2 23.5 244 28-306 27-289 (394)
52 PRK15034 nitrate/nitrite trans 99.9 7.5E-25 1.6E-29 188.8 21.4 244 20-309 58-323 (462)
53 TIGR00896 CynX cyanate transpo 99.9 1.1E-24 2.3E-29 186.2 21.9 243 20-306 24-267 (355)
54 TIGR00712 glpT glycerol-3-phos 99.9 4E-25 8.7E-30 193.9 19.1 260 20-302 51-317 (438)
55 TIGR00805 oat sodium-independe 99.9 3E-26 6.6E-31 207.5 12.3 270 19-302 56-397 (633)
56 KOG0253 Synaptic vesicle trans 99.9 1.5E-24 3.2E-29 175.2 19.8 281 20-309 102-418 (528)
57 PRK11195 lysophospholipid tran 99.9 1.8E-24 4E-29 186.9 21.8 250 20-308 27-277 (393)
58 TIGR00885 fucP L-fucose:H+ sym 99.9 2.8E-24 6E-29 186.3 22.0 248 20-307 27-304 (410)
59 TIGR00899 2A0120 sugar efflux 99.9 3E-24 6.6E-29 184.8 21.9 245 20-308 22-271 (375)
60 COG2223 NarK Nitrate/nitrite t 99.9 1E-24 2.2E-29 180.1 17.5 248 20-308 38-290 (417)
61 PRK03633 putative MFS family t 99.9 3.2E-24 6.9E-29 185.0 21.5 240 20-308 30-271 (381)
62 TIGR00897 2A0118 polyol permea 99.9 5.7E-24 1.2E-28 184.6 22.6 246 22-305 39-290 (402)
63 PRK10504 putative transporter; 99.9 9.5E-24 2.1E-28 187.1 23.1 278 19-308 33-333 (471)
64 PRK12382 putative transporter; 99.9 1.1E-23 2.5E-28 182.3 21.4 237 21-308 41-285 (392)
65 TIGR00901 2A0125 AmpG-related 99.9 1.3E-23 2.7E-28 179.7 20.1 254 20-308 12-281 (356)
66 PRK05122 major facilitator sup 99.9 1.6E-23 3.4E-28 181.9 20.4 238 20-308 40-285 (399)
67 cd06174 MFS The Major Facilita 99.9 3.8E-23 8.2E-28 176.0 22.3 224 20-308 23-248 (352)
68 PRK11652 emrD multidrug resist 99.9 2E-23 4.3E-28 180.9 20.9 240 20-302 32-273 (394)
69 TIGR00892 2A0113 monocarboxyla 99.9 2.4E-23 5.1E-28 183.2 16.4 259 20-299 43-303 (455)
70 KOG0252 Inorganic phosphate tr 99.9 1.2E-23 2.7E-28 174.6 12.5 275 27-309 80-385 (538)
71 PRK11646 multidrug resistance 99.9 2.9E-22 6.2E-27 173.6 21.3 242 20-306 35-278 (400)
72 PRK09874 drug efflux system pr 99.9 3.1E-22 6.8E-27 174.2 21.6 247 20-308 38-294 (408)
73 PRK10489 enterobactin exporter 99.9 1E-22 2.2E-27 177.8 18.4 249 20-308 41-295 (417)
74 PRK10054 putative transporter; 99.9 1.4E-22 3.1E-27 175.2 18.4 245 20-308 32-280 (395)
75 TIGR00806 rfc RFC reduced fola 99.9 1.2E-22 2.6E-27 172.4 16.8 263 20-292 50-320 (511)
76 PRK15011 sugar efflux transpor 99.9 1.1E-21 2.4E-26 169.8 22.9 243 20-308 40-288 (393)
77 TIGR00902 2A0127 phenyl propri 99.9 1.9E-21 4.1E-26 167.7 20.5 248 20-309 28-277 (382)
78 PRK11010 ampG muropeptide tran 99.9 4.1E-21 9E-26 170.3 21.9 248 20-307 36-294 (491)
79 PRK08633 2-acyl-glycerophospho 99.9 1.9E-21 4.2E-26 189.7 20.9 256 22-308 36-305 (1146)
80 PRK11902 ampG muropeptide tran 99.9 9.1E-21 2E-25 164.6 22.5 249 20-307 23-281 (402)
81 PRK11128 putative 3-phenylprop 99.9 4.1E-21 8.9E-26 165.7 20.1 245 21-309 29-277 (382)
82 KOG2615 Permease of the major 99.9 1.2E-21 2.5E-26 159.4 15.1 153 25-178 62-218 (451)
83 TIGR00882 2A0105 oligosacchari 99.9 1.8E-20 4E-25 162.5 21.0 252 20-309 27-291 (396)
84 PRK06814 acylglycerophosphoeth 99.9 9.7E-21 2.1E-25 184.5 20.1 248 22-305 42-294 (1140)
85 TIGR00792 gph sugar (Glycoside 99.9 1.6E-20 3.5E-25 165.0 16.4 253 19-308 23-293 (437)
86 COG2807 CynX Cyanate permease 99.9 2.1E-19 4.5E-24 145.9 20.8 240 20-304 36-275 (395)
87 KOG2504 Monocarboxylate transp 99.9 5E-21 1.1E-25 168.2 12.4 277 20-304 70-365 (509)
88 PRK09528 lacY galactoside perm 99.8 1.7E-19 3.6E-24 157.7 21.1 251 20-308 35-298 (420)
89 COG0738 FucP Fucose permease [ 99.8 4E-19 8.7E-24 146.3 21.8 249 20-307 37-307 (422)
90 KOG3764 Vesicular amine transp 99.8 6.4E-21 1.4E-25 156.0 7.8 235 23-301 98-335 (464)
91 TIGR00889 2A0110 nucleoside tr 99.8 2.8E-19 6E-24 155.7 17.7 245 20-309 27-288 (418)
92 PTZ00207 hypothetical protein; 99.8 4.3E-19 9.2E-24 157.4 17.5 146 19-171 50-202 (591)
93 PRK10207 dipeptide/tripeptide 99.8 3.2E-18 6.9E-23 151.4 23.0 152 20-174 39-194 (489)
94 TIGR00924 yjdL_sub1_fam amino 99.8 1.7E-17 3.6E-22 146.6 23.8 149 21-172 36-190 (475)
95 PF06609 TRI12: Fungal trichot 99.8 1.3E-17 2.8E-22 147.2 20.2 148 20-172 68-215 (599)
96 PRK10642 proline/glycine betai 99.8 1.1E-17 2.3E-22 149.0 14.6 177 21-199 276-459 (490)
97 TIGR02718 sider_RhtX_FptX side 99.8 1E-16 2.2E-21 138.8 19.7 247 20-308 25-280 (390)
98 PF05977 MFS_3: Transmembrane 99.7 2.6E-16 5.7E-21 139.2 17.9 247 24-308 38-290 (524)
99 PF13347 MFS_2: MFS/sugar tran 99.7 5.6E-17 1.2E-21 142.0 13.3 252 20-309 26-297 (428)
100 PRK10429 melibiose:sodium symp 99.7 3.1E-16 6.7E-21 138.9 17.8 255 20-308 31-302 (473)
101 PRK09669 putative symporter Ya 99.7 1.4E-16 3.1E-21 140.2 14.7 250 20-308 34-300 (444)
102 TIGR01301 GPH_sucrose GPH fami 99.7 1.1E-15 2.3E-20 133.2 19.4 157 22-178 30-223 (477)
103 PRK09584 tppB putative tripept 99.7 6.3E-15 1.4E-19 131.1 21.9 144 20-166 46-193 (500)
104 TIGR00880 2_A_01_02 Multidrug 99.7 9.8E-16 2.1E-20 112.7 10.0 135 38-175 5-140 (141)
105 PF03825 Nuc_H_symport: Nucleo 99.6 3.3E-14 7.1E-19 122.3 20.1 249 23-309 29-280 (400)
106 TIGR00788 fbt folate/biopterin 99.6 3E-15 6.5E-20 132.1 13.3 268 17-309 47-325 (468)
107 PRK15462 dipeptide/tripeptide 99.6 1.6E-13 3.4E-18 120.3 22.8 147 20-169 34-184 (493)
108 PRK11462 putative transporter; 99.6 6.7E-14 1.5E-18 123.4 20.2 246 21-306 35-297 (460)
109 TIGR01299 synapt_SV2 synaptic 99.6 1.1E-14 2.4E-19 133.4 14.9 141 33-177 597-737 (742)
110 TIGR01272 gluP glucose/galacto 99.6 2.9E-14 6.2E-19 119.1 16.1 192 79-308 5-214 (310)
111 TIGR00889 2A0110 nucleoside tr 99.6 2.4E-14 5.2E-19 124.9 15.9 149 29-177 249-406 (418)
112 PF03137 OATP: Organic Anion T 99.6 7.2E-17 1.6E-21 143.2 -0.2 272 19-301 26-371 (539)
113 KOG2563 Permease of the major 99.6 4.7E-14 1E-18 118.1 15.9 248 22-303 71-332 (480)
114 PRK09848 glucuronide transport 99.6 8.6E-14 1.9E-18 122.7 17.9 249 20-309 33-301 (448)
115 PF11700 ATG22: Vacuole efflux 99.6 7.7E-13 1.7E-17 116.1 23.6 248 31-308 70-355 (477)
116 COG2211 MelB Na+/melibiose sym 99.6 1.7E-13 3.7E-18 117.4 16.6 254 21-309 38-309 (467)
117 KOG3626 Organic anion transpor 99.5 9.3E-15 2E-19 130.4 7.5 265 19-300 120-457 (735)
118 PRK15011 sugar efflux transpor 99.5 1.6E-13 3.5E-18 118.9 14.8 152 20-175 241-392 (393)
119 PF01306 LacY_symp: LacY proto 99.5 1.4E-12 3E-17 110.8 17.6 251 20-308 32-295 (412)
120 KOG2325 Predicted transporter/ 99.5 1.5E-12 3.3E-17 111.9 17.5 162 17-179 56-235 (488)
121 cd06174 MFS The Major Facilita 99.5 5.1E-13 1.1E-17 113.6 14.4 147 24-173 204-351 (352)
122 PRK09528 lacY galactoside perm 99.5 2.5E-13 5.3E-18 118.9 12.2 147 27-176 258-406 (420)
123 PRK11551 putative 3-hydroxyphe 99.5 4.7E-13 1E-17 116.6 13.1 154 20-175 244-397 (406)
124 PRK05122 major facilitator sup 99.5 7.8E-13 1.7E-17 114.9 13.8 143 32-177 250-392 (399)
125 TIGR00890 2A0111 Oxalate/Forma 99.5 7.8E-13 1.7E-17 113.7 12.9 142 22-166 231-374 (377)
126 TIGR00899 2A0120 sugar efflux 99.5 1.6E-12 3.4E-17 111.9 14.2 151 21-175 225-375 (375)
127 PRK10077 xylE D-xylose transpo 99.4 3.8E-12 8.1E-17 113.4 15.7 158 20-177 295-461 (479)
128 PRK09556 uhpT sugar phosphate 99.4 2.1E-12 4.6E-17 114.5 13.4 153 20-172 283-447 (467)
129 PF05631 DUF791: Protein of un 99.4 2.8E-11 6E-16 99.7 18.6 232 24-292 62-300 (354)
130 PRK03893 putative sialic acid 99.4 1.3E-12 2.9E-17 116.7 11.0 140 21-163 301-442 (496)
131 PF03209 PUCC: PUCC protein; 99.4 4E-11 8.6E-16 100.4 18.5 251 21-308 5-281 (403)
132 PRK09952 shikimate transporter 99.4 7.2E-12 1.6E-16 110.1 14.7 155 21-176 276-435 (438)
133 COG2270 Permeases of the major 99.4 5.5E-11 1.2E-15 99.4 18.8 249 29-309 56-325 (438)
134 KOG4686 Predicted sugar transp 99.4 1.3E-13 2.8E-18 108.6 3.1 259 20-307 68-335 (459)
135 TIGR00892 2A0113 monocarboxyla 99.4 1.3E-12 2.8E-17 115.4 9.2 143 24-168 269-415 (455)
136 COG3104 PTR2 Dipeptide/tripept 99.4 4.3E-11 9.4E-16 102.2 16.6 150 22-174 52-206 (498)
137 TIGR00879 SP MFS transporter, 99.4 8.6E-12 1.9E-16 110.7 13.1 155 20-177 308-474 (481)
138 PRK03633 putative MFS family t 99.4 1.4E-11 3.1E-16 106.3 13.8 146 22-173 226-371 (381)
139 PRK10489 enterobactin exporter 99.4 1E-11 2.3E-16 108.5 13.0 153 22-177 250-403 (417)
140 PRK09874 drug efflux system pr 99.4 1.1E-11 2.3E-16 108.1 12.5 137 33-172 260-396 (408)
141 PRK12382 putative transporter; 99.4 1.5E-11 3.1E-16 106.7 13.2 137 33-172 251-387 (392)
142 TIGR00902 2A0127 phenyl propri 99.3 3.3E-11 7.2E-16 104.1 14.8 142 24-170 233-375 (382)
143 PRK03545 putative arabinose tr 99.3 4E-11 8.6E-16 103.9 15.0 148 20-172 230-378 (390)
144 PRK03699 putative transporter; 99.3 1.3E-11 2.7E-16 107.2 11.6 152 20-175 230-381 (394)
145 PF01770 Folate_carrier: Reduc 99.3 8.3E-11 1.8E-15 99.5 15.9 271 20-292 28-307 (412)
146 PF11700 ATG22: Vacuole efflux 99.3 7E-11 1.5E-15 103.9 14.9 154 20-175 306-469 (477)
147 TIGR00883 2A0106 metabolite-pr 99.3 2.5E-11 5.4E-16 105.0 11.0 142 20-163 244-390 (394)
148 TIGR00891 2A0112 putative sial 99.3 3.4E-11 7.4E-16 104.7 11.9 136 21-158 264-400 (405)
149 TIGR00893 2A0114 d-galactonate 99.3 8E-11 1.7E-15 101.8 13.8 147 20-170 240-395 (399)
150 PRK09705 cynX putative cyanate 99.3 8.7E-11 1.9E-15 101.9 13.8 151 24-178 233-386 (393)
151 TIGR00897 2A0118 polyol permea 99.3 1.3E-10 2.8E-15 101.2 14.3 148 21-173 247-400 (402)
152 PRK11010 ampG muropeptide tran 99.3 4.3E-10 9.2E-15 100.2 17.5 154 20-176 247-405 (491)
153 TIGR00887 2A0109 phosphate:H+ 99.3 8.8E-11 1.9E-15 105.2 13.2 140 38-177 342-492 (502)
154 COG2270 Permeases of the major 99.3 7.4E-11 1.6E-15 98.7 11.3 152 23-176 280-431 (438)
155 PLN00028 nitrate transmembrane 99.2 6.3E-11 1.4E-15 105.2 11.2 150 20-174 277-433 (476)
156 KOG2816 Predicted transporter 99.2 1.5E-10 3.3E-15 100.7 13.1 242 39-309 70-315 (463)
157 PRK10406 alpha-ketoglutarate t 99.2 2E-10 4.4E-15 100.9 13.7 153 20-175 268-425 (432)
158 TIGR00898 2A0119 cation transp 99.2 1.7E-10 3.6E-15 103.5 13.0 134 39-177 363-498 (505)
159 PRK12307 putative sialic acid 99.2 2.6E-10 5.7E-15 100.0 13.3 124 23-146 258-383 (426)
160 PRK10504 putative transporter; 99.2 2.3E-10 5.1E-15 101.7 13.0 123 23-145 289-414 (471)
161 TIGR00900 2A0121 H+ Antiporter 99.2 1.5E-10 3.2E-15 99.1 11.3 121 25-145 241-362 (365)
162 PRK11273 glpT sn-glycerol-3-ph 99.2 3.8E-10 8.3E-15 99.7 14.0 150 20-172 278-433 (452)
163 PF06813 Nodulin-like: Nodulin 99.2 6.9E-10 1.5E-14 88.5 13.6 154 19-177 25-185 (250)
164 PRK15075 citrate-proton sympor 99.2 6.1E-10 1.3E-14 97.9 14.4 129 20-148 263-396 (434)
165 KOG0569 Permease of the major 99.2 1.9E-09 4E-14 93.7 16.9 154 20-177 294-458 (485)
166 TIGR00895 2A0115 benzoate tran 99.2 1.9E-10 4.1E-15 99.7 10.9 124 20-143 274-397 (398)
167 PF05977 MFS_3: Transmembrane 99.2 4.9E-10 1.1E-14 99.6 13.2 145 23-170 246-390 (524)
168 TIGR00792 gph sugar (Glycoside 99.2 2.1E-09 4.6E-14 94.6 17.2 117 29-145 255-379 (437)
169 PRK11128 putative 3-phenylprop 99.1 1.4E-09 3E-14 94.0 14.8 139 24-167 233-372 (382)
170 PRK11663 regulatory protein Uh 99.1 6.4E-10 1.4E-14 97.8 12.4 148 21-172 269-422 (434)
171 TIGR00882 2A0105 oligosacchari 99.1 1.5E-09 3.2E-14 94.3 13.3 141 27-170 250-391 (396)
172 PRK08633 2-acyl-glycerophospho 99.1 7.1E-10 1.5E-14 109.1 12.0 143 20-164 257-400 (1146)
173 TIGR00926 2A1704 Peptide:H+ sy 99.1 4.2E-08 9.2E-13 89.4 22.5 150 22-171 14-179 (654)
174 PRK15402 multidrug efflux syst 99.1 4E-09 8.7E-14 92.0 15.1 139 22-164 242-385 (406)
175 PRK11646 multidrug resistance 99.1 1.4E-09 3E-14 94.6 11.6 147 23-169 235-383 (400)
176 TIGR02718 sider_RhtX_FptX side 99.1 4.5E-09 9.9E-14 91.1 14.3 143 23-168 235-385 (390)
177 KOG2504 Monocarboxylate transp 99.1 4.1E-10 8.8E-15 99.7 7.6 153 20-174 322-476 (509)
178 PRK09848 glucuronide transport 99.1 9.1E-09 2E-13 90.9 15.9 124 21-144 254-386 (448)
179 COG2814 AraJ Arabinose efflux 99.0 6.8E-09 1.5E-13 87.6 13.5 149 19-172 235-384 (394)
180 TIGR00712 glpT glycerol-3-phos 99.0 2.2E-09 4.8E-14 94.5 10.8 154 20-176 276-436 (438)
181 PRK10091 MFS transport protein 99.0 5E-09 1.1E-13 90.6 12.5 147 20-170 224-372 (382)
182 KOG4686 Predicted sugar transp 99.0 2.5E-09 5.4E-14 84.9 9.2 144 21-166 290-435 (459)
183 TIGR00711 efflux_EmrB drug res 99.0 3.4E-09 7.4E-14 94.5 11.4 124 21-144 281-408 (485)
184 PRK10213 nepI ribonucleoside t 99.0 1.5E-08 3.2E-13 88.0 14.8 143 20-166 241-383 (394)
185 PRK11902 ampG muropeptide tran 99.0 9E-09 2E-13 89.6 13.5 147 20-173 234-389 (402)
186 PRK14995 methyl viologen resis 99.0 4.5E-09 9.8E-14 94.0 11.8 125 20-144 284-411 (495)
187 COG2271 UhpC Sugar phosphate p 99.0 2.8E-09 6.1E-14 89.3 9.5 148 20-170 277-430 (448)
188 TIGR02332 HpaX 4-hydroxyphenyl 99.0 2.9E-09 6.4E-14 92.9 10.0 135 26-162 274-409 (412)
189 PRK11195 lysophospholipid tran 99.0 1.3E-08 2.8E-13 88.3 13.7 123 21-144 231-354 (393)
190 COG0477 ProP Permeases of the 99.0 8.3E-09 1.8E-13 85.8 12.1 134 31-165 39-176 (338)
191 TIGR00710 efflux_Bcr_CflA drug 99.0 2.1E-08 4.4E-13 86.7 14.8 118 22-140 233-356 (385)
192 PRK10054 putative transporter; 99.0 7.4E-09 1.6E-13 89.9 12.0 150 24-177 237-388 (395)
193 TIGR00896 CynX cyanate transpo 99.0 6.5E-09 1.4E-13 88.9 11.2 126 22-148 223-350 (355)
194 TIGR00901 2A0125 AmpG-related 99.0 3.4E-09 7.4E-14 90.7 9.3 107 24-130 237-355 (356)
195 KOG0253 Synaptic vesicle trans 99.0 3.5E-09 7.7E-14 87.1 8.5 131 42-177 392-522 (528)
196 TIGR00788 fbt folate/biopterin 98.9 7.9E-09 1.7E-13 91.5 10.9 152 24-175 281-447 (468)
197 PRK06814 acylglycerophosphoeth 98.9 8.3E-09 1.8E-13 101.5 11.7 141 20-162 250-410 (1140)
198 PF07690 MFS_1: Major Facilita 98.9 1.3E-08 2.7E-13 86.8 11.1 116 22-137 233-352 (352)
199 TIGR00894 2A0114euk Na(+)-depe 98.9 2.1E-08 4.6E-13 89.0 12.8 154 20-174 286-450 (465)
200 PRK10473 multidrug efflux syst 98.9 3.9E-08 8.5E-13 85.3 13.9 116 22-139 230-346 (392)
201 COG2223 NarK Nitrate/nitrite t 98.9 1.2E-08 2.6E-13 85.5 9.8 150 20-172 243-399 (417)
202 TIGR00881 2A0104 phosphoglycer 98.9 6.9E-09 1.5E-13 89.2 8.7 133 20-155 241-378 (379)
203 PF03825 Nuc_H_symport: Nucleo 98.9 5.6E-08 1.2E-12 84.0 14.2 149 28-176 240-398 (400)
204 TIGR01272 gluP glucose/galacto 98.9 4.9E-08 1.1E-12 81.8 13.2 130 25-160 172-301 (310)
205 TIGR00903 2A0129 major facilit 98.9 5.7E-08 1.2E-12 83.4 13.3 143 24-175 220-366 (368)
206 PF03092 BT1: BT1 family; Int 98.9 1.3E-08 2.9E-13 89.0 9.3 153 19-175 13-176 (433)
207 PRK10429 melibiose:sodium symp 98.9 1.3E-07 2.9E-12 84.1 15.8 117 29-145 264-392 (473)
208 PRK11102 bicyclomycin/multidru 98.8 1.6E-07 3.6E-12 80.9 15.3 119 22-141 221-344 (377)
209 TIGR00769 AAA ADP/ATP carrier 98.8 5.3E-06 1.2E-10 72.7 23.8 116 29-144 41-189 (472)
210 PF01306 LacY_symp: LacY proto 98.8 9.9E-08 2.1E-12 81.5 12.6 147 27-176 255-403 (412)
211 PRK09669 putative symporter Ya 98.8 6.9E-07 1.5E-11 78.9 17.6 116 30-145 263-387 (444)
212 PRK10133 L-fucose transporter; 98.8 1.4E-07 3E-12 83.0 12.9 136 23-164 287-423 (438)
213 PRK15034 nitrate/nitrite trans 98.7 2.1E-07 4.5E-12 81.3 13.0 134 37-172 292-452 (462)
214 PRK11043 putative transporter; 98.7 3.2E-07 7E-12 79.9 13.9 125 20-145 227-356 (401)
215 PF13347 MFS_2: MFS/sugar tran 98.7 3.4E-07 7.3E-12 80.5 13.6 115 31-145 260-383 (428)
216 COG2211 MelB Na+/melibiose sym 98.7 1.3E-06 2.8E-11 75.7 15.6 121 22-142 263-392 (467)
217 PRK09584 tppB putative tripept 98.7 4.6E-07 1E-11 81.1 13.1 136 35-170 320-475 (500)
218 PF05978 UNC-93: Ion channel r 98.6 1.2E-06 2.7E-11 64.7 12.4 111 33-144 39-149 (156)
219 KOG3098 Uncharacterized conser 98.6 1.3E-05 2.8E-10 69.6 19.6 108 37-145 56-163 (461)
220 TIGR00924 yjdL_sub1_fam amino 98.6 1.6E-06 3.5E-11 77.1 13.4 137 33-172 314-466 (475)
221 KOG0254 Predicted transporter 98.5 4.5E-06 9.7E-11 75.1 15.6 154 20-177 319-487 (513)
222 COG2807 CynX Cyanate permease 98.5 3.4E-06 7.4E-11 69.8 12.8 149 20-171 232-382 (395)
223 TIGR00886 2A0108 nitrite extru 98.5 3.7E-07 8E-12 78.4 7.8 112 20-132 250-365 (366)
224 PRK11652 emrD multidrug resist 98.5 4.6E-06 9.9E-11 72.5 14.5 123 22-145 234-359 (394)
225 PF06779 DUF1228: Protein of u 98.4 1.4E-06 3E-11 56.6 7.3 75 12-88 10-84 (85)
226 PF00083 Sugar_tr: Sugar (and 98.4 4.2E-09 9.1E-14 93.1 -6.5 152 20-177 277-440 (451)
227 KOG3762 Predicted transporter 98.4 3.4E-07 7.3E-12 79.2 4.9 144 26-172 401-545 (618)
228 PRK10207 dipeptide/tripeptide 98.4 4.9E-06 1.1E-10 74.2 12.5 138 34-171 312-473 (489)
229 TIGR00885 fucP L-fucose:H+ sym 98.4 5.9E-06 1.3E-10 72.2 12.4 130 27-159 265-397 (410)
230 PRK11462 putative transporter; 98.4 2E-05 4.4E-10 69.9 15.5 115 30-144 262-385 (460)
231 PF06963 FPN1: Ferroportin1 (F 98.3 0.00014 3E-09 63.2 19.5 256 41-308 48-329 (432)
232 KOG0637 Sucrose transporter an 98.3 1.2E-06 2.6E-11 74.5 6.6 124 20-143 56-202 (498)
233 KOG2532 Permease of the major 98.3 4.2E-06 9.1E-11 73.6 10.2 153 19-173 282-446 (466)
234 PF03209 PUCC: PUCC protein; 98.3 2E-05 4.3E-10 66.7 13.5 152 18-169 231-393 (403)
235 KOG0252 Inorganic phosphate tr 98.3 4.7E-07 1E-11 76.9 3.8 134 45-178 362-502 (538)
236 PF12832 MFS_1_like: MFS_1 lik 98.3 5.7E-06 1.2E-10 53.3 7.4 64 242-307 7-70 (77)
237 TIGR01301 GPH_sucrose GPH fami 98.3 2.7E-05 5.9E-10 68.6 13.4 143 34-177 308-475 (477)
238 KOG3764 Vesicular amine transp 98.2 1.4E-06 3.1E-11 72.7 4.3 144 24-170 299-450 (464)
239 PF03219 TLC: TLC ATP/ADP tran 98.2 0.0022 4.8E-08 56.9 23.4 266 11-306 41-353 (491)
240 KOG0255 Synaptic vesicle trans 98.1 6.5E-05 1.4E-09 67.9 13.1 133 43-179 362-498 (521)
241 KOG3810 Micronutrient transpor 98.1 2.3E-05 5E-10 64.5 8.8 158 24-183 34-192 (433)
242 PF12832 MFS_1_like: MFS_1 lik 98.1 1.6E-05 3.5E-10 51.2 6.3 48 23-70 27-74 (77)
243 COG0738 FucP Fucose permease [ 98.0 5.9E-05 1.3E-09 63.6 10.1 129 23-157 264-392 (422)
244 PRK15403 multidrug efflux syst 98.0 0.00014 2.9E-09 63.8 12.5 125 21-146 244-373 (413)
245 PF06609 TRI12: Fungal trichot 97.9 9.3E-05 2E-09 66.7 10.3 148 32-179 350-559 (599)
246 KOG2816 Predicted transporter 97.9 0.00028 6.1E-09 62.0 13.0 123 20-143 266-389 (463)
247 KOG2615 Permease of the major 97.7 0.0001 2.2E-09 61.7 6.4 122 24-145 290-413 (451)
248 PTZ00207 hypothetical protein; 97.6 0.00026 5.6E-09 64.1 8.6 153 19-172 376-550 (591)
249 PF02487 CLN3: CLN3 protein; 97.6 0.0024 5.1E-08 54.9 13.4 135 34-175 62-197 (402)
250 KOG2533 Permease of the major 97.5 0.00024 5.1E-09 63.0 6.1 132 25-158 303-440 (495)
251 PRK15462 dipeptide/tripeptide 97.5 0.0053 1.1E-07 54.7 14.1 134 33-166 310-469 (493)
252 PF00854 PTR2: POT family; In 97.4 0.0011 2.5E-08 57.1 9.1 108 62-172 2-121 (372)
253 KOG4332 Predicted sugar transp 97.4 0.00061 1.3E-08 54.5 6.3 91 22-113 63-154 (454)
254 KOG1237 H+/oligopeptide sympor 97.3 0.0026 5.7E-08 57.6 11.0 148 20-170 62-241 (571)
255 PF03092 BT1: BT1 family; Int 97.2 0.0016 3.5E-08 57.3 8.3 150 28-177 252-416 (433)
256 COG3202 ATP/ADP translocase [E 96.9 0.25 5.5E-06 43.4 22.5 119 28-146 58-210 (509)
257 TIGR00939 2a57 Equilibrative N 96.7 0.076 1.6E-06 46.8 13.9 52 83-139 105-156 (437)
258 KOG3098 Uncharacterized conser 96.6 0.067 1.4E-06 47.0 13.0 105 34-139 282-407 (461)
259 PF13000 Acatn: Acetyl-coenzym 96.6 0.036 7.8E-07 48.7 10.8 43 98-140 132-174 (544)
260 KOG3574 Acetyl-CoA transporter 96.5 0.057 1.2E-06 45.8 11.2 118 20-139 54-188 (510)
261 KOG2563 Permease of the major 96.5 0.013 2.9E-07 50.5 7.6 149 27-176 297-452 (480)
262 PRK03612 spermidine synthase; 96.5 0.11 2.4E-06 46.9 13.8 118 25-144 44-169 (521)
263 PF06963 FPN1: Ferroportin1 (F 96.4 0.075 1.6E-06 46.5 12.2 125 27-152 289-423 (432)
264 COG3104 PTR2 Dipeptide/tripept 96.4 0.051 1.1E-06 47.7 10.7 142 26-170 322-483 (498)
265 KOG3762 Predicted transporter 96.3 0.0076 1.6E-07 53.1 5.2 62 20-81 35-97 (618)
266 PF02487 CLN3: CLN3 protein; 96.2 0.073 1.6E-06 45.9 10.4 116 26-145 276-396 (402)
267 TIGR00806 rfc RFC reduced fola 95.9 0.031 6.8E-07 49.2 6.9 71 235-309 28-99 (511)
268 PF06779 DUF1228: Protein of u 95.7 0.028 6.1E-07 36.7 4.7 56 251-308 8-63 (85)
269 TIGR00805 oat sodium-independe 95.5 0.013 2.7E-07 54.4 3.6 68 240-309 38-105 (633)
270 PF05631 DUF791: Protein of un 95.2 0.12 2.5E-06 43.7 7.8 46 260-307 59-104 (354)
271 PF06813 Nodulin-like: Nodulin 94.7 0.087 1.9E-06 42.5 5.7 61 246-309 13-73 (250)
272 KOG1479 Nucleoside transporter 94.6 1 2.2E-05 38.9 12.1 35 83-118 116-150 (406)
273 PF01733 Nucleoside_tran: Nucl 93.1 0.026 5.6E-07 47.4 0.0 43 92-139 5-47 (309)
274 KOG1330 Sugar transporter/spin 92.0 0.39 8.4E-06 42.0 5.6 56 252-309 50-105 (493)
275 KOG3880 Predicted small molecu 90.3 1.1 2.4E-05 37.2 6.3 77 68-144 326-402 (409)
276 KOG2881 Predicted membrane pro 89.9 9 0.00019 30.8 11.9 27 280-308 250-276 (294)
277 PF07672 MFS_Mycoplasma: Mycop 88.9 0.35 7.6E-06 38.9 2.5 57 116-173 2-61 (267)
278 PF07672 MFS_Mycoplasma: Mycop 86.8 11 0.00025 30.5 9.8 103 33-136 143-255 (267)
279 KOG3097 Predicted membrane pro 86.7 18 0.0004 30.6 15.5 74 40-114 67-140 (390)
280 COG5336 Uncharacterized protei 86.6 5.3 0.00011 27.2 6.5 42 33-74 44-86 (116)
281 KOG4332 Predicted sugar transp 85.6 16 0.00035 30.1 10.0 132 33-169 284-426 (454)
282 KOG0637 Sucrose transporter an 85.6 2.5 5.5E-05 37.1 5.9 80 32-111 333-412 (498)
283 TIGR00939 2a57 Equilibrative N 84.1 7.6 0.00016 34.5 8.5 63 82-144 370-432 (437)
284 PF01770 Folate_carrier: Reduc 82.9 7.7 0.00017 33.9 7.8 96 32-127 286-383 (412)
285 KOG3880 Predicted small molecu 81.1 4.6 0.0001 33.7 5.5 133 34-172 65-197 (409)
286 KOG1479 Nucleoside transporter 79.1 24 0.00052 30.8 9.4 108 33-141 284-400 (406)
287 PF05978 UNC-93: Ion channel r 78.5 7.2 0.00016 29.0 5.5 60 248-309 9-74 (156)
288 KOG4830 Predicted sugar transp 76.9 3.6 7.8E-05 33.4 3.6 53 252-304 34-93 (412)
289 KOG2325 Predicted transporter/ 75.9 1.1 2.4E-05 39.8 0.7 50 258-309 57-109 (488)
290 COG1288 Predicted membrane pro 70.9 61 0.0013 28.6 9.6 30 148-177 214-245 (481)
291 TIGR00769 AAA ADP/ATP carrier 69.3 88 0.0019 28.2 13.0 71 92-165 274-345 (472)
292 PF13000 Acatn: Acetyl-coenzym 68.0 26 0.00057 31.6 7.1 47 89-135 410-456 (544)
293 PF11947 DUF3464: Protein of u 67.8 34 0.00074 25.3 6.6 80 53-135 56-145 (153)
294 COG0477 ProP Permeases of the 66.8 16 0.00035 29.5 5.7 55 252-308 19-75 (338)
295 TIGR00880 2_A_01_02 Multidrug 65.3 31 0.00066 24.0 6.3 42 32-73 88-129 (141)
296 PF07760 DUF1616: Protein of u 63.4 87 0.0019 26.0 9.2 58 87-145 22-79 (287)
297 PF11299 DUF3100: Protein of u 62.9 3.1 6.8E-05 32.7 0.6 100 22-143 130-229 (241)
298 COG1268 BioY Uncharacterized c 59.4 52 0.0011 25.2 6.5 24 37-60 88-111 (184)
299 KOG3146 Dolichyl pyrophosphate 59.0 86 0.0019 24.5 8.3 31 3-33 68-102 (228)
300 KOG3810 Micronutrient transpor 58.8 26 0.00057 30.1 5.2 95 34-128 274-370 (433)
301 PF01733 Nucleoside_tran: Nucl 57.9 3.2 6.9E-05 34.9 -0.1 107 36-142 187-306 (309)
302 PF07857 DUF1632: CEO family ( 57.2 1.1E+02 0.0023 25.0 9.5 24 152-175 114-137 (254)
303 KOG0055 Multidrug/pheromone ex 55.8 2.4E+02 0.0053 28.8 11.9 20 151-170 807-826 (1228)
304 PF06912 DUF1275: Protein of u 54.8 1E+02 0.0022 24.1 12.6 37 37-73 52-91 (209)
305 PF02632 BioY: BioY family; I 53.6 81 0.0018 23.2 6.6 26 37-62 59-84 (148)
306 KOG1237 H+/oligopeptide sympor 52.7 30 0.00064 32.0 5.1 63 83-145 457-519 (571)
307 COG4262 Predicted spermidine s 50.6 1.7E+02 0.0037 25.4 9.3 83 29-111 41-132 (508)
308 TIGR00801 ncs2 uracil-xanthine 48.7 74 0.0016 28.1 6.8 100 22-122 29-132 (415)
309 PF03137 OATP: Organic Anion T 48.1 6 0.00013 36.2 0.0 64 243-308 11-74 (539)
310 PF10785 NADH-u_ox-rdase: NADH 47.9 78 0.0017 20.8 5.6 41 44-84 31-78 (86)
311 PF02694 UPF0060: Uncharacteri 46.3 47 0.001 22.8 4.0 50 31-80 54-103 (107)
312 PF00860 Xan_ur_permease: Perm 46.1 56 0.0012 28.5 5.7 97 22-122 25-128 (389)
313 TIGR03173 pbuX xanthine permea 45.8 69 0.0015 28.2 6.2 98 22-120 19-117 (406)
314 KOG3312 Predicted membrane pro 45.4 49 0.0011 24.1 4.1 6 172-177 29-34 (186)
315 TIGR00926 2A1704 Peptide:H+ sy 44.4 92 0.002 29.5 7.0 59 83-141 564-622 (654)
316 COG2233 UraA Xanthine/uracil p 43.4 1.7E+02 0.0037 26.2 8.0 101 21-121 39-142 (451)
317 PRK02237 hypothetical protein; 41.9 86 0.0019 21.6 4.7 49 32-80 57-105 (109)
318 COG4769 Predicted membrane pro 39.6 56 0.0012 24.4 3.8 47 44-96 86-132 (181)
319 KOG2927 Membrane component of 39.2 24 0.00052 29.8 2.2 26 113-141 210-235 (372)
320 COG3086 RseC Positive regulato 38.7 1.6E+02 0.0034 21.6 6.5 52 25-76 66-118 (150)
321 KOG3626 Organic anion transpor 38.2 34 0.00075 32.4 3.2 54 20-73 417-473 (735)
322 PF13386 DsbD_2: Cytochrome C 38.0 1.9E+02 0.0041 22.4 10.8 26 267-292 147-172 (199)
323 PLN02975 complex I subunit 36.0 1.2E+02 0.0026 20.5 4.6 62 17-83 14-78 (97)
324 PRK14229 camphor resistance pr 35.3 1.5E+02 0.0033 20.4 9.1 25 91-115 56-80 (108)
325 TIGR00844 c_cpa1 na(+)/h(+) an 35.0 4.4E+02 0.0096 25.8 10.4 36 126-164 107-142 (810)
326 PF04281 Tom22: Mitochondrial 34.8 1.4E+02 0.0029 21.7 5.1 24 109-132 60-83 (137)
327 COG2119 Predicted membrane pro 34.5 1.6E+02 0.0035 22.6 5.6 37 40-76 143-179 (190)
328 CHL00114 psbX photosystem II p 34.5 34 0.00074 18.5 1.5 23 268-290 2-24 (39)
329 PF06596 PsbX: Photosystem II 33.6 73 0.0016 17.3 2.7 15 268-282 2-16 (39)
330 PF11298 DUF3099: Protein of u 33.6 1.1E+02 0.0024 19.4 4.0 61 53-117 9-69 (73)
331 TIGR00986 3a0801s05tom22 mitoc 32.0 1.5E+02 0.0033 21.7 4.9 23 109-131 58-80 (145)
332 PF02990 EMP70: Endomembrane p 30.7 2.5E+02 0.0054 25.8 7.4 71 225-302 252-327 (521)
333 PF08566 Pam17: Mitochondrial 30.7 2.3E+02 0.0049 21.5 5.8 10 221-230 24-33 (173)
334 PF10225 DUF2215: Uncharacteri 29.9 2.1E+02 0.0046 23.3 6.1 52 80-135 30-81 (249)
335 PF15192 TMEM213: TMEM213 fami 29.0 1E+02 0.0023 19.3 3.2 10 171-180 71-80 (82)
336 PF04550 Phage_holin_2: Phage 28.8 1.3E+02 0.0028 19.9 3.7 33 82-114 29-61 (89)
337 PF11833 DUF3353: Protein of u 28.7 2.8E+02 0.0061 21.6 7.6 29 117-145 138-166 (194)
338 PF13493 DUF4118: Domain of un 27.8 75 0.0016 21.4 2.9 24 38-61 82-105 (105)
339 KOG3097 Predicted membrane pro 27.2 1.6E+02 0.0036 25.2 5.1 42 29-70 308-349 (390)
340 PF01528 Herpes_glycop: Herpes 26.6 3E+02 0.0065 24.0 6.7 14 101-114 251-264 (374)
341 TIGR00930 2a30 K-Cl cotranspor 26.5 6.8E+02 0.015 25.2 10.4 7 151-157 518-524 (953)
342 KOG3574 Acetyl-CoA transporter 25.7 1.4E+02 0.0031 26.3 4.6 55 90-144 375-429 (510)
343 PF09930 DUF2162: Predicted tr 25.4 3.5E+02 0.0077 21.6 6.5 51 23-76 123-173 (224)
344 PF04346 EutH: Ethanolamine ut 25.1 4.5E+02 0.0098 22.7 16.0 95 46-140 61-161 (354)
345 PF03547 Mem_trans: Membrane t 25.0 3.2E+02 0.0068 23.6 6.9 17 43-59 7-23 (385)
346 TIGR02230 ATPase_gene1 F0F1-AT 24.6 2.3E+02 0.0051 19.3 6.6 34 40-73 51-85 (100)
347 PF01405 PsbT: Photosystem II 24.1 1.1E+02 0.0024 15.3 2.7 9 170-178 20-28 (29)
348 PLN02878 homogentisate phytylt 23.3 3.8E+02 0.0082 22.3 6.4 21 57-77 195-215 (280)
349 PF02990 EMP70: Endomembrane p 23.2 1.9E+02 0.0041 26.5 5.3 45 112-156 289-333 (521)
350 PF15061 DUF4538: Domain of un 22.8 88 0.0019 18.8 2.0 20 151-170 4-23 (58)
351 PF11151 DUF2929: Protein of u 22.7 1.8E+02 0.004 17.3 6.4 47 128-177 10-56 (57)
352 PF03219 TLC: TLC ATP/ADP tran 22.4 6E+02 0.013 23.2 14.4 68 94-164 292-360 (491)
353 PRK10621 hypothetical protein; 22.2 4.4E+02 0.0095 21.5 12.2 20 42-61 85-104 (266)
354 TIGR01667 YCCS_YHJK integral m 21.3 7.4E+02 0.016 23.9 8.8 52 48-99 40-96 (701)
355 PF09605 Trep_Strep: Hypotheti 21.1 3.9E+02 0.0085 20.5 10.4 30 45-74 42-71 (186)
356 PF12273 RCR: Chitin synthesis 20.1 51 0.0011 23.6 0.9 12 153-164 1-12 (130)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-35 Score=252.68 Aligned_cols=300 Identities=27% Similarity=0.446 Sum_probs=248.8
Q ss_pred hhhhhhhhhhHhhhccccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhh--
Q 021634 3 PFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA-- 80 (310)
Q Consensus 3 ~f~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~-- 80 (310)
+.+++|.++.+...+..+.-. +.-....+.+.+++.+|.++|+++.++++||+|||..+.++.++..++.++..+
T Consensus 35 ~~i~~f~n~t~~~r~g~~~s~---~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~ 111 (485)
T KOG0569|consen 35 ELIKSFINETLIERYGLPLSD---STLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSK 111 (485)
T ss_pred HHHHHHHHHHHHHhcCCCCCh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 345666655555444321100 001234678889999999999999999999999999999999998888877665
Q ss_pred -hhhHHHHHHHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCC-CchhHHHHHh
Q 021634 81 -AVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKG-GWGWRVSLAL 158 (310)
Q Consensus 81 -~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~wr~~~~~ 158 (310)
.+++.+++++|++.|+..|......+.|+.|..|++.||....+.+.+..+|.+++..++ +.+..+ ...|++.+.+
T Consensus 112 ~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~--l~~ilGt~~~W~~l~~~ 189 (485)
T KOG0569|consen 112 SAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLG--LPSLLGTEDLWPYLLAF 189 (485)
T ss_pred HhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHc--cHHhcCCCcchHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999997776 334433 3469999999
Q ss_pred hHHHHHHHHHHhhcccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhh---ccccccchhhhhccc-cchh
Q 021634 159 AAVPASILTLGALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASS---TAKTINHPFKKIIQR-KYRP 234 (310)
Q Consensus 159 ~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~ 234 (310)
..+++++..+...++||||||+..++.+.++|++.++.+++.++.+++.++..++.+ .+++++.++++.+++ ..++
T Consensus 190 ~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~ 269 (485)
T KOG0569|consen 190 PLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRR 269 (485)
T ss_pred HHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhH
Confidence 999999999999999999999998655599999999999999876665554433322 222355678888875 5677
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 235 QLLMAMAIPFFQQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
+..+.+.+....++.+.+....|...++++.|++++++.+.....+...++..+++.+ ++||+|||++++.++
T Consensus 270 ~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~--lid~~gRRpLll~~~ 342 (485)
T KOG0569|consen 270 PLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPF--LIDRLGRRPLLLISL 342 (485)
T ss_pred HHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHhcCCcHHHHHHH
Confidence 7788888889999999999999999999999999999999999999999999999999 999999999998764
No 2
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.8e-32 Score=244.18 Aligned_cols=280 Identities=18% Similarity=0.232 Sum_probs=204.4
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhh------HHHHHHHHHHHhhccc
Q 021634 26 CKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVN------VYMLIFGRLLLGVGVG 99 (310)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~ 99 (310)
.+.+..+.+++.+...++..++++++|+++||+|||+++.++.++..++.++++++++ ++.++++|++.|++.|
T Consensus 51 ~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g 130 (502)
T TIGR00887 51 GPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIG 130 (502)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHh
Confidence 4566778899999999999999999999999999999999999999999998888765 7889999999999999
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccc--------------------CCCchhHHHHHhh
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQI--------------------KGGWGWRVSLALA 159 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~--------------------~~~~~wr~~~~~~ 159 (310)
...+....+++|++|+++|++++++.+....+|.++++.++..+... ..+++||+.+.+.
T Consensus 131 ~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~ 210 (502)
T TIGR00887 131 GDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFG 210 (502)
T ss_pred hhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHH
Confidence 99999999999999999999999999999999999988887654321 1124799999999
Q ss_pred HHHHHHHHHHhhcccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchh---HH
Q 021634 160 AVPASILTLGALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRP---QL 236 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 236 (310)
+++.++..+..+++||||+|+..++++.+++.+...+....+..++ .++.++..++++..+.++++.+++...+ +.
T Consensus 211 ~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 289 (502)
T TIGR00887 211 AVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAE-PDEVEKASTAVEVPKASWSDFFTHFFKWRHGKH 289 (502)
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccC-cccccchhccccchhhhHHHHHHHHhhhHHHHH
Confidence 9888888777888999999998877755556655555443221110 1111110011111123567766532211 22
Q ss_pred HHHHHHHHHHHhhhHHHHHHhHHHHHHHcCCCchhHHH------------HHHHHHhhhhhhhhHHHHHHHHHHhccchh
Q 021634 237 LMAMAIPFFQQVTGINVIAFYAPLLFRTIGLGRLKVCQ------------LSKWIECGGSIGFGRNMWVKWMNRVRWRKL 304 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~ 304 (310)
.+.....++.....++....+.|.++++.|+++.+++. ...+..++.+++.+++++ ++||+|||++
T Consensus 290 ~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~--l~dr~gRR~~ 367 (502)
T TIGR00887 290 LLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVF--LVDIIGRKPI 367 (502)
T ss_pred HHHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhhhhcchhH
Confidence 33233333333445566777899999888887653221 233344566778888899 9999999998
Q ss_pred hhhc
Q 021634 305 DIYT 308 (310)
Q Consensus 305 ~~~~ 308 (310)
++.+
T Consensus 368 l~~~ 371 (502)
T TIGR00887 368 QLMG 371 (502)
T ss_pred HHHH
Confidence 7764
No 3
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1.8e-31 Score=242.26 Aligned_cols=243 Identities=18% Similarity=0.225 Sum_probs=192.6
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
|.+.++++++..+.+++.+++.++.+++++++|+++||+|||+.+++++++.+++.++++++++++.++++|++.|++.+
T Consensus 191 p~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g 270 (742)
T TIGR01299 191 PSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIG 270 (742)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 66788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccC----------CCchhHHHHHhhHHHHHHHHHH
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIK----------GGWGWRVSLALAAVPASILTLG 169 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----------~~~~wr~~~~~~~~~~~~~~~~ 169 (310)
+..+....++.|++|+++|++.++++..+..+|.++++.++..+.... ...+||+.+++.+++.++.++.
T Consensus 271 ~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~ 350 (742)
T TIGR01299 271 GAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGA 350 (742)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988776554321 1247999999998888888777
Q ss_pred hhcccCCchhhHhccCcHHHHHHHHHHhcCCcch-----HHHH--HHHHHhhh--------ccccc--------------
Q 021634 170 ALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDV-----EAEF--DDLLKASS--------TAKTI-------------- 220 (310)
Q Consensus 170 ~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~--------~~~~~-------------- 220 (310)
.+++||+|+|+..+++ .+++.+.++++...+.. .... ++.+...+ .+...
T Consensus 351 ~~~lPESPrwL~~~gr-~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (742)
T TIGR01299 351 LTFMPESPRFFLENGK-HDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGG 429 (742)
T ss_pred HHHcCCCHHHHHHCCC-HHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhh
Confidence 8889999999988877 88888888887765421 1111 11111000 00000
Q ss_pred --cchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhHHHHHHH
Q 021634 221 --NHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRT 264 (310)
Q Consensus 221 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (310)
..+++++++.+.++++++ +.+.++.....++++..|+|.++++
T Consensus 430 ~~~~~~~~lf~~~~~~~tl~-l~~~wf~~~~~yygl~~w~P~~~~~ 474 (742)
T TIGR01299 430 GIWGNFLRCFNPEVREITIK-LMGVWFTLSFGYYGLSVWFPDMIKH 474 (742)
T ss_pred hHHHHHHHHcCccHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 013455666666666555 4455566667889999999988643
No 4
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=6.5e-31 Score=233.37 Aligned_cols=282 Identities=23% Similarity=0.347 Sum_probs=210.4
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh------------hhHHHHH
Q 021634 21 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA------------VNVYMLI 88 (310)
Q Consensus 21 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~------------~~~~~l~ 88 (310)
....+++.++.+.+++.+++.++..++++++|+++||+|||++++++.++..++.+.++++ +.++.++
T Consensus 45 ~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 124 (479)
T PRK10077 45 PQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFV 124 (479)
T ss_pred cccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHH
Confidence 3455679999999999999999999999999999999999999999999999888877653 2356778
Q ss_pred HHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccc-----CCCchhHHHHHhhHHHH
Q 021634 89 FGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQI-----KGGWGWRVSLALAAVPA 163 (310)
Q Consensus 89 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~wr~~~~~~~~~~ 163 (310)
++|+++|++.|...+....+++|++|+++|++++++.+.+..+|.++++.++..+... .+.++||+.|++.+++.
T Consensus 125 ~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~ 204 (479)
T PRK10077 125 IYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPA 204 (479)
T ss_pred HHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988877655421 23468999999988888
Q ss_pred HHHHHHhhcccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHH
Q 021634 164 SILTLGALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIP 243 (310)
Q Consensus 164 ~~~~~~~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
++..+..+++||+|+++..+++ .+++++..++..+.++.....++..+...+++.. .+..+. .............
T Consensus 205 ~~~~~~~~~l~~s~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~ 279 (479)
T PRK10077 205 LLFLMLLYFVPETPRYLMSRGK-QEQAEGILRKIMGNTLATQALQEIKHSLDHGRKT---GGKLLM-FGVGVIVIGVMLS 279 (479)
T ss_pred HHHHHHHHcCCCCcHHHHHcCC-HHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhh---hhhhcc-hhHHHHHHHHHHH
Confidence 7777667779999988766555 5666655555544433222222222111111100 011111 1111112222233
Q ss_pred HHHHhhhHHHHHHhHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 244 FFQQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
.+.+..+++...++.|.+.++.|.+...........++..+++.+++++ ++||+|||++++.+.
T Consensus 280 ~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~--l~dr~g~r~~~i~~~ 343 (479)
T PRK10077 280 VFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIM--TVDKFGRKPLQIIGA 343 (479)
T ss_pred HHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHH--HHHHhcChHHHHHhH
Confidence 4445555667778889999989998888888888888899999999999 999999999887653
No 5
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=3.9e-31 Score=235.73 Aligned_cols=273 Identities=35% Similarity=0.550 Sum_probs=232.2
Q ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccchhhhhh
Q 021634 31 QLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLS 110 (310)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~ 110 (310)
.+.+++.++..++..+++++.|+++|++|||+.++++.+...++.+++++++|++.++++|+++|+|.|....+.+.|++
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~s 168 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHh
Confidence 46699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCchhhHhccCcHHHH
Q 021634 111 EMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNSLIQRKSDHQKA 190 (310)
Q Consensus 111 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~~ 190 (310)
|..|++.||...+..+....+|..++..++....+. . ++||..+.+..+++++..+..+++||+|+|+.++++ .+++
T Consensus 169 Eiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~-~-~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~-~~~a 245 (513)
T KOG0254|consen 169 EIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKV-Y-AGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGR-LEEA 245 (513)
T ss_pred hcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC-C-ccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCC-hHHH
Confidence 999999999999999999999999997776666543 2 579999999999999988888889999999999777 8889
Q ss_pred HHHHHHhcC--CcchHHHHHHHHHhhhcc---ccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhHHHHHHHc
Q 021634 191 KLMLQRVRG--TNDVEAEFDDLLKASSTA---KTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRTI 265 (310)
Q Consensus 191 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (310)
+..+.++.+ +.+.+.+.++.+.+...+ ...+..+++++++..+++..+...+..+.++.+++...+|.+.+++..
T Consensus 246 ~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~ 325 (513)
T KOG0254|consen 246 KRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA 325 (513)
T ss_pred HHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhc
Confidence 999888888 344444444444211111 111224667776667888888899999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 266 GLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 266 g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
|.+... .....+.++..+++.+++.+ +.||+|||++++.|.
T Consensus 326 g~~~~~-~~~~~~~~~v~~~~t~~~~~--lvd~~gRr~lll~s~ 366 (513)
T KOG0254|consen 326 GLKSDT-FLASIILGVVNFLGTLVATY--LVDRFGRRKLLLFGA 366 (513)
T ss_pred CCCCch-HHHHHHHHHHHHHHHHHHHH--HHHHhccHHHHHHhH
Confidence 887655 56666677788888888888 999999999998764
No 6
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.98 E-value=2.1e-30 Score=225.22 Aligned_cols=273 Identities=15% Similarity=0.188 Sum_probs=203.8
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
+.+++|+|+++++.+++.+++.+++.+++++.|+++||+|||+++..+.++..+++++++++++++.+++.|++.|++.+
T Consensus 32 ~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 111 (412)
T TIGR02332 32 LTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEA 111 (412)
T ss_pred HhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccc---CCCchhHHHHHhhHHHHHHHHH-HhhcccC
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQI---KGGWGWRVSLALAAVPASILTL-GALFLPE 175 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~wr~~~~~~~~~~~~~~~-~~~~~~e 175 (310)
...+....++.|++|+++|++++++++.+.++|..+++.+++.+... .+..+||+.|++.+++.++..+ .++++||
T Consensus 112 ~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~ 191 (412)
T TIGR02332 112 GFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDD 191 (412)
T ss_pred hHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCC
Confidence 98888889999999999999999999999999999999998776532 2346899999998888776544 4456888
Q ss_pred CchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHh-hhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHH
Q 021634 176 TPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKA-SSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVI 254 (310)
Q Consensus 176 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (310)
+|+... ..+.++.+...+..+.+... .++.++. .+++...+..+++.+ ++.++...+.+++....++.+
T Consensus 192 ~p~~~~--~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 261 (412)
T TIGR02332 192 SPDKAK--WLDEEDKKALKEMIDNDQLT---LEQPEGAFAHAAMPQRSMLREIF-----TPAIMLYTLAYFCLTNTLSAI 261 (412)
T ss_pred CcccCC--CCCHHHHHHHHHHHHhcccc---ccccccccccccccHHHHHHHhc-----ChHHHHHHHHHHHHHHHHHHH
Confidence 874310 00011111111111100000 0000000 000000011222222 233444555555666667788
Q ss_pred HHhHHHHHHHc--CCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchh
Q 021634 255 AFYAPLLFRTI--GLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKL 304 (310)
Q Consensus 255 ~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~ 304 (310)
..|.|.++++. |.++.+++.......++..+|.++.++ ++||+++|+.
T Consensus 262 ~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~--l~dr~~~r~~ 311 (412)
T TIGR02332 262 NIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSR--HSDRLKERKH 311 (412)
T ss_pred HHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHH--HhcccCccHH
Confidence 99999999875 678888899999999999999999999 9999997764
No 7
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.97 E-value=3.9e-30 Score=228.41 Aligned_cols=263 Identities=14% Similarity=0.123 Sum_probs=190.9
Q ss_pred cccccccccchhH----HHH--HHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHH-------
Q 021634 20 TKISNYCKFDSQL----LTS--FTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYM------- 86 (310)
Q Consensus 20 ~~i~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~------- 86 (310)
+.+.+++..+.++ .+. ..++.++++.++++++|+++||+|||+++.++++++++++++++++++++.
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~ 119 (490)
T PRK10642 40 YALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPI 119 (490)
T ss_pred HHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 5566666533221 222 247788999999999999999999999999999999999999999999874
Q ss_pred -HHHHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccc-----CCCchhHHHHHhhH
Q 021634 87 -LIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQI-----KGGWGWRVSLALAA 160 (310)
Q Consensus 87 -l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~wr~~~~~~~ 160 (310)
++++|+++|++.|..++....+++|++|+++|+++.++...+..+|..+++.+...+... ..++|||+.|++.+
T Consensus 120 ~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~ 199 (490)
T PRK10642 120 LLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIAL 199 (490)
T ss_pred HHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHH
Confidence 788999999999999999999999999999999999999988888888877665433321 12478999999987
Q ss_pred HHHHHHHHHhhcccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHH
Q 021634 161 VPASILTLGALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAM 240 (310)
Q Consensus 161 ~~~~~~~~~~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
++.++..+....+||+|++...+++ .++.. . +. .++..+.++++.+++ .++.... .
T Consensus 200 ~~~l~~~~~~~~~~esp~~~~~~~~-~~~~~-------~------------~~--~~~~~~~~~~~~~~~-~~~~~~~-~ 255 (490)
T PRK10642 200 PLGIIGLYLRHALEETPAFQQHVDK-LEQGD-------R------------EG--LQDGPKVSFKEIATK-HWRSLLT-C 255 (490)
T ss_pred HHHHHHHHHHHcCCCChhHHHHHHh-hhhhc-------c------------cc--ccccccCCHHHHHHH-hHHHHHH-H
Confidence 7666655555678999876432211 00000 0 00 000112244555543 2222222 2
Q ss_pred HHHHHHHhhhHHHHHHhHHHHHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 241 AIPFFQQVTGINVIAFYAPLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
....+.....++.+..|.|.++++ .|++..+.........++..++.++.++ ++||+|||+.++.+
T Consensus 256 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~--l~dr~grr~~~~~~ 322 (490)
T PRK10642 256 IGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGL--LSDRFGRRPFVILG 322 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhccHHHHHHH
Confidence 222233344567778899999954 5998888888878888889999999999 99999999987654
No 8
>TIGR00898 2A0119 cation transport protein.
Probab=99.97 E-value=2.5e-30 Score=231.04 Aligned_cols=274 Identities=18% Similarity=0.200 Sum_probs=206.2
Q ss_pred ccccccccccc---hhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHh
Q 021634 19 DTKISNYCKFD---SQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLG 95 (310)
Q Consensus 19 ~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 95 (310)
.+.+.+|++++ +.+.++..+++.++..+++++.|+++||+|||++++++.++..++.++.+++++++.+++.|++.|
T Consensus 112 ~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G 191 (505)
T TIGR00898 112 SSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVG 191 (505)
T ss_pred cccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 46789999999 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccC
Q 021634 96 VGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPE 175 (310)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~e 175 (310)
++.+...+....++.|++|+++|+++.++...+..+|.++++.++..+. +||+.+++.+++.++..+..+++||
T Consensus 192 ~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~------~wr~~~~~~~i~~~~~~~~~~~~~e 265 (505)
T TIGR00898 192 MGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP------DWRWLQLAVSLPTFLFFLLSWFVPE 265 (505)
T ss_pred hhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999887654 3999999999888887777788999
Q ss_pred CchhhHhccCcHHHHHHHHHHhcCCcch---HHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHH
Q 021634 176 TPNSLIQRKSDHQKAKLMLQRVRGTNDV---EAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGIN 252 (310)
Q Consensus 176 s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (310)
+|+|+..+++ .+++.+..++..+.++. .+..+...++...+++.+.++++.++++..+...+...+.++.....++
T Consensus 266 sp~~l~~~~~-~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (505)
T TIGR00898 266 SPRWLISQGR-IEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYY 344 (505)
T ss_pred ChHHHHHCCC-HHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988777 66666665554433221 1111111011111111234566777665544444444333333222222
Q ss_pred HHHHhHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 253 VIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 253 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
. .+.+..+.+.+. .....+.++..+++.++.++ +.||+|||+.+.++
T Consensus 345 ~----~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~--l~dr~grr~~~~~~ 391 (505)
T TIGR00898 345 G----LVLDLGNLGGNI---YLDLFISGLVELPAKLITLL--LIDRLGRRYTMAAS 391 (505)
T ss_pred H----HhccccccCCCh---HHHHHHHHHHHHHHHHHHHH--HHHHhCCHHHHHHH
Confidence 2 222333444443 23344556778888999999 99999999987764
No 9
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.97 E-value=8.2e-29 Score=219.60 Aligned_cols=275 Identities=32% Similarity=0.549 Sum_probs=206.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh---hhHHHHHHHHHHHhhcccccccc
Q 021634 28 FDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA---VNVYMLIFGRLLLGVGVGFANQS 104 (310)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~ 104 (310)
.+..+.+++.+++.++..++++++|+++||+|||++++.+.++..++.+++.+. .+++.++++|++.|++.+...+.
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 147 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASAL 147 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhH
Confidence 458999999999999999999999999999999999999999999999888554 44568999999999999999999
Q ss_pred hhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHH---hhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCchhhH
Q 021634 105 VPLYLSEMAPARYRGAINNGFQFSIGIGALAANFIN---YGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNSLI 181 (310)
Q Consensus 105 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~ 181 (310)
...++.|++|+++|++++++.+.+..+|..+++.++ .... +..+||+.|++.++..++..+..+++||+|++..
T Consensus 148 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~---~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~ 224 (481)
T TIGR00879 148 VPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLN---NTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLV 224 (481)
T ss_pred HHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCC---CCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHH
Confidence 999999999999999999999999999999999997 3322 3458999999977777766666777999988765
Q ss_pred hccCcHHHHHHHHHHhcCCcchHHHHHH----HHH-hhhccccccchhhhhcccc--chhHHHHHHHHHHHHHhhhHHHH
Q 021634 182 QRKSDHQKAKLMLQRVRGTNDVEAEFDD----LLK-ASSTAKTINHPFKKIIQRK--YRPQLLMAMAIPFFQQVTGINVI 254 (310)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 254 (310)
.+++ .+++++..++..+.++.+....+ ... ...+.+..+..+++.++.. ..++.++...+.++......+..
T Consensus 225 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (481)
T TIGR00879 225 GKGR-VEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAI 303 (481)
T ss_pred HcCC-hHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeeh
Confidence 5544 34444443333322211111100 000 0000011111233333321 23555555556666655566677
Q ss_pred HHhHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 255 AFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 255 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
..+.|.+.++.|++..+++.......++.+++.+++++ +.||++||+.+..+
T Consensus 304 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~--l~d~~~~~~~~~~~ 355 (481)
T TIGR00879 304 MYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIF--LVDRFGRRPLLLIG 355 (481)
T ss_pred HHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHH--HHHHhcchHHHHHH
Confidence 88899999999999988999999999999999999999 99999999987754
No 10
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1e-29 Score=211.70 Aligned_cols=244 Identities=16% Similarity=0.144 Sum_probs=198.6
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcc
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 98 (310)
-|++.+|+++|..+.|++.++|.++..+++++...++||+.||++++..+.+++++++++++++||+.++++|++.|+..
T Consensus 36 Lp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~ 115 (394)
T COG2814 36 LPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAH 115 (394)
T ss_pred hHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc-ccCCc
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF-LPETP 177 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~-~~es~ 177 (310)
|..++....+..+..|+++|++++++...+..++.++|.+++.++.+. +|||..|++.+.++++..+..+. +| |
T Consensus 116 G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~---~GWR~~F~~ia~l~ll~~~~~~~~lP--~ 190 (394)
T COG2814 116 GVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQL---FGWRATFLAIAVLALLALLLLWKLLP--P 190 (394)
T ss_pred HHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHHHhCC--C
Confidence 999999999999999999999999999999999999999999999865 57999999999999887766544 77 2
Q ss_pred hhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHh
Q 021634 178 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 257 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (310)
+....+.. . ...+..+.++++. ++...+..+..+.+.+....|
T Consensus 191 ~~~~~~~~--~-------------------------------~~~~~~~~l~~p~----v~~~l~~t~l~~~g~F~~ftY 233 (394)
T COG2814 191 SEISGSLP--G-------------------------------PLRTLLRLLRRPG----VLLGLLATFLFMTGHFALYTY 233 (394)
T ss_pred ccCCCCCC--c-------------------------------chhHHHHHhcCch----HHHHHHHHHHHHcchhhhHHh
Confidence 11100000 0 0001122333322 222333333333444555555
Q ss_pred HHHHHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhh
Q 021634 258 APLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 307 (310)
Q Consensus 258 ~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~ 307 (310)
...++++ .|++++...+....+++++++|+.++|+ +.|| +.|+.+..
T Consensus 234 i~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGr--l~dr-~~~~~l~~ 281 (394)
T COG2814 234 IRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGR--LADR-GPRRALIA 281 (394)
T ss_pred HHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhh--hccc-cchhHHHH
Confidence 5666655 5999999999999999999999999999 9999 77776654
No 11
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.1e-29 Score=209.05 Aligned_cols=266 Identities=16% Similarity=0.127 Sum_probs=216.6
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcc
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 98 (310)
.|++.+|.++|.+|.+.+.+.+.+.+.++..+.|.++||.+.|..+.+++++.++.+++++++++.+.+.+.-++.|.++
T Consensus 52 ~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQ 131 (448)
T COG2271 52 MPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQ 131 (448)
T ss_pred cHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHH--hhhcccCCCchhHHHHHhhHHHHHHHHHHhhc-ccC
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFIN--YGTEQIKGGWGWRVSLALAAVPASILTLGALF-LPE 175 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~-~~e 175 (310)
|..+|.+...++.|+|+++||+..++++.+.++|+.+.+++. +++.. +.+||..|++.++++++..+..++ .+|
T Consensus 132 g~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~---~~~w~~~f~~pgiiaiival~~~~~~rd 208 (448)
T COG2271 132 GMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAF---HGGWRAAFYFPGIIAIIVALILLFLLRD 208 (448)
T ss_pred cCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHh---ccchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999998887 44443 347999999999999887766655 788
Q ss_pred CchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhh-hccccchhHHHHHHHHHHHHHhhhHHHH
Q 021634 176 TPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKK-IIQRKYRPQLLMAMAIPFFQQVTGINVI 254 (310)
Q Consensus 176 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (310)
+|+..--.. .|+.+ ++. .+...++++.+..+.++ .++-..+++.++.+.+..++....-+++
T Consensus 209 ~Pqs~GLP~--ie~~~-------~d~--------~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi 271 (448)
T COG2271 209 RPQSEGLPP--IEEYR-------GDP--------LEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGI 271 (448)
T ss_pred CccccCCCC--HHHhh-------cCc--------hhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 875321111 11111 000 00000111111123333 3445567788888888888888888999
Q ss_pred HHhHHHHHHHc-CCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHh--ccchhhh
Q 021634 255 AFYAPLLFRTI-GLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRV--RWRKLDI 306 (310)
Q Consensus 255 ~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~--g~r~~~~ 306 (310)
+.|.|.|+.|. |++..++....+..-.++++|.+++|+ ++||+ |||....
T Consensus 272 ~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~Gw--lSDklfkgrR~p~~ 324 (448)
T COG2271 272 NDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGW--LSDKLFKGRRGPMA 324 (448)
T ss_pred hhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHH--HHHHhcccccchHH
Confidence 99999999665 999999999999999999999999999 99996 5776543
No 12
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.97 E-value=1.3e-28 Score=214.04 Aligned_cols=274 Identities=15% Similarity=0.191 Sum_probs=198.6
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
+.+++++|+++.+.+++.+++.++..+++++.|+++||+|||++++.+.++.++++++++++++++.+++.|++.|++.+
T Consensus 36 ~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~ 115 (405)
T TIGR00891 36 AEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMG 115 (405)
T ss_pred HHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhh
Confidence 66889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCchh
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNS 179 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~ 179 (310)
...+....++.|++|+++|+++.++.+.+..+|..+++.++..+....+ .+||+.|++.++..++..+....+||++++
T Consensus 116 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~-~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 194 (405)
T TIGR00891 116 GEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWG-DGWRALFFISILPIIFALWLRKNIPEAEDW 194 (405)
T ss_pred hhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ccHHHHHHHHHHHHHHHHHHHHhCCCChhH
Confidence 9999999999999999999999999999999999999999877654322 259999988776666655555668887654
Q ss_pred hHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhHH
Q 021634 180 LIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAP 259 (310)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (310)
...+++ .++..+..++..+.++. .++. .++.....++. ....++.+...................+.|
T Consensus 195 ~~~~~~-~~~~~~~~~~~~~~~~~------~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (405)
T TIGR00891 195 KEKHAG-KALVRTMVDILYGGEHR------IANI---VMTLAAAMVQS--AGKRWPTFVYLVVLVLFANLYSHPIQDLLP 262 (405)
T ss_pred HHHhhh-hhhhhhHHHHHhccchh------hhhh---hhhhhHHhhhh--hhhhhHHHHHHHHHHHHHHHHHhhhhhhhH
Confidence 322211 11111111111100000 0000 00000001110 111112222222222222223345566778
Q ss_pred HHHH-HcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 260 LLFR-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 260 ~~~~-~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
.+++ +.|+++.+.+.+.....++.+++.++.++ +.||+|||+.+.++
T Consensus 263 ~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~--l~dr~g~~~~~~~~ 310 (405)
T TIGR00891 263 TYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGF--LGDWLGRRKAYVCS 310 (405)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhCchhhhHHH
Confidence 8875 56999999999999999999999999999 99999999987654
No 13
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.97 E-value=9.7e-35 Score=255.93 Aligned_cols=276 Identities=30% Similarity=0.573 Sum_probs=224.5
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhh---hHHHHHHHHHHHhhcccccccch
Q 021634 29 DSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV---NVYMLIFGRLLLGVGVGFANQSV 105 (310)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~ 105 (310)
++.+.+++.+...+|..+|++++|+++||+|||+.+.++.++..++.++.++++ +++.+.++|++.|++.|...+..
T Consensus 44 ~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~ 123 (451)
T PF00083_consen 44 SSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVS 123 (451)
T ss_pred hHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 456789999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCchhhHhccC
Q 021634 106 PLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNSLIQRKS 185 (310)
Q Consensus 106 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~ 185 (310)
..++.|..|+++|++..++.+.+..+|.+++..++.......+++.||..+.+.++++++..+..+++||||+|+..+++
T Consensus 124 ~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~ 203 (451)
T PF00083_consen 124 PIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGR 203 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeccccc
Confidence 99999999999999999999999999999988887766544444679999999999998888888889999999988888
Q ss_pred cHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccc-hhHHHHHHHHHHHHHhhhHHHHHHhHHHHHHH
Q 021634 186 DHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKY-RPQLLMAMAIPFFQQVTGINVIAFYAPLLFRT 264 (310)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (310)
.++|++..++.++.+..+++.++..++.++.++.+.+++++++.+. +++......+..+.+..+.+....|.+.++++
T Consensus 204 -~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~ 282 (451)
T PF00083_consen 204 -DEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN 282 (451)
T ss_pred -ccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccc
Confidence 6688888888665544444443333333333222356677776543 55666666666677677777788888888888
Q ss_pred cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 265 IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 265 ~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
.|.+.. ........+...++.+++.+ ++||+|||++++.+.
T Consensus 283 ~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~GRr~~~i~~~ 323 (451)
T PF00083_consen 283 AGISNS--FLATLILGLVNFLGTLLAIF--LIDRFGRRKLLIIGL 323 (451)
T ss_pred cccccc--cccccccccccccccccccc--ccccccccccccccc
Confidence 887776 33344555667778888888 999999999988764
No 14
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.97 E-value=1.5e-28 Score=215.15 Aligned_cols=249 Identities=16% Similarity=0.116 Sum_probs=182.3
Q ss_pred cccccccc---cchhHHHH---HHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHH--------
Q 021634 20 TKISNYCK---FDSQLLTS---FTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVY-------- 85 (310)
Q Consensus 20 ~~i~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~-------- 85 (310)
+.+.+|++ .+..+.+. ..+..+++..++++++|+++||+|||+++..+.+++.++++++++++++.
T Consensus 46 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (432)
T PRK10406 46 LYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPA 125 (432)
T ss_pred HHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHH
Confidence 56667763 45554444 34445555569999999999999999999999999999999999888764
Q ss_pred HHHHHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccC-----CCchhHHHHHhhH
Q 021634 86 MLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIK-----GGWGWRVSLALAA 160 (310)
Q Consensus 86 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~wr~~~~~~~ 160 (310)
.++++|+++|++.|..++....+++|++|+++|+++.++.+.+...|.++++.+...+.... ..+|||+.|++.+
T Consensus 126 ~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~ 205 (432)
T PRK10406 126 LLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGA 205 (432)
T ss_pred HHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHH
Confidence 58889999999999999999999999999999999999988888888888777655443321 2468999999988
Q ss_pred HHHHHHHHHhhcccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHH
Q 021634 161 VPASILTLGALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAM 240 (310)
Q Consensus 161 ~~~~~~~~~~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
++.++.......+||+|++..+ + . ++..++++.+++ ++.+...
T Consensus 206 ~~~ll~~~~~~~~~e~~~~~~~---------~----------------------~---~~~~~~~~l~~~---~~~~~~~ 248 (432)
T PRK10406 206 VLAVVALWLRRQLDETSQQETR---------A----------------------L---KEAGSLKGLWRN---RRAFIMV 248 (432)
T ss_pred HHHHHHHHHHhcCCCCchHHHh---------h----------------------h---cccccHHHHHhh---HHHHHHH
Confidence 8877665555557776542100 0 0 001134444432 1222222
Q ss_pred HHHHHHHhhhHHHHHHhHHHHHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhh
Q 021634 241 AIPFFQQVTGINVIAFYAPLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 307 (310)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~ 307 (310)
....+.....++.+..|.|.++++ .|.+..+.+....+..+...++..+.++ ++||++||+.++.
T Consensus 249 ~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~--l~Dr~grr~~~~~ 314 (432)
T PRK10406 249 LGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGA--LSDKIGRRTSMLC 314 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHcCchHHHHH
Confidence 222223234556678899999865 5999888888888888888888888899 9999999987654
No 15
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.97 E-value=2.5e-28 Score=213.73 Aligned_cols=262 Identities=18% Similarity=0.223 Sum_probs=196.3
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcc
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 98 (310)
.+.+++++|+|+.+.+++.+++.++..+++++.|+++||+|||+++..+.++..++.++.+++++++.++++|++.|++.
T Consensus 41 ~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~ 120 (426)
T PRK12307 41 MYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGM 120 (426)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 36788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCch
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPN 178 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~ 178 (310)
+...+....++.|++|+++|+++.++...+..+|.++++.+...+.+ ..+||+.|++..+..++........||+++
T Consensus 121 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~---~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~ 197 (426)
T PRK12307 121 AGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE---AYGWRAAFFVGLLPVLLVIYIRARAPESKE 197 (426)
T ss_pred hhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc---cCCHHHHHHHHHHHHHHHHHHHHHCCCChH
Confidence 99999999999999999999999999999999999999888665543 357999998865444333322223455543
Q ss_pred hhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhH
Q 021634 179 SLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYA 258 (310)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (310)
+..++.+ .+++. .....+..+.++++.++++..+...... ...+........+..++
T Consensus 198 ~~~~~~~-------------~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 254 (426)
T PRK12307 198 WEEAKLS-------------GKGKH---------SQSAWSVFSLSMKGLFNRAQFPLTLCVF-IVLFSIFGANWPIFGLL 254 (426)
T ss_pred HHHhhhh-------------ccccc---------cccchhhhhHHHHHHHhhchHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 2211000 00000 0000000112344555544333322222 22222233334466788
Q ss_pred HHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 259 PLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 259 ~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
|.++++.|.++.+.+.......++.+++.++.++ +.||++||+.+..+
T Consensus 255 ~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~--l~dr~~~~~~~~~~ 302 (426)
T PRK12307 255 PTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGL--CADRIGLKKTFSIG 302 (426)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhccHHHHHHH
Confidence 9999888999999999999999999999999999 99999999887654
No 16
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.96 E-value=1.9e-28 Score=209.03 Aligned_cols=239 Identities=15% Similarity=0.062 Sum_probs=175.2
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcc
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 98 (310)
.|.+++|+|+|+++.+++.+.+.+++.+++++.|+++||+|||+++..+......+......+++++.++++|+++|++.
T Consensus 14 lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~ 93 (368)
T TIGR00903 14 LSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQ 93 (368)
T ss_pred HHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHh
Confidence 37788999999999999999999999999999999999999998876555544444333333378999999999999998
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHH-hhcccCCc
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLG-ALFLPETP 177 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~-~~~~~es~ 177 (310)
+. .......++|++|+++|++++++.+.+..+|.++++.++..+.+ +++||+.|++.++++++..+. .+++||+|
T Consensus 94 ~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~---~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 94 PF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYT---AGGLQLLIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred HH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---ccchHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 86 45556667999999999999999999999999999999887764 368999999977777665544 45589987
Q ss_pred hhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHh
Q 021634 178 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 257 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (310)
++..+ + .+. ++. ..++++.+++ +.++...+.+++....++.+..|
T Consensus 170 ~~~~~--~-~~~------------------~~~----------~~~~~~ll~~----~~~~~~~~~~~~~~~~~~~~~~w 214 (368)
T TIGR00903 170 FQAAE--G-FGF------------------KDA----------VKEFGALAGR----KDLWIIGAILGFGVALFDNLAIW 214 (368)
T ss_pred CCCCC--C-cch------------------HHH----------HHHHHHHHcC----hhHHHHHHHHHHHHHHHHHHHHH
Confidence 64211 0 000 000 0123444444 33455555566666677888999
Q ss_pred HHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccc
Q 021634 258 APLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWR 302 (310)
Q Consensus 258 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r 302 (310)
+|.++++.|++.. .+....+..+.+.++ .++ +.||..||
T Consensus 215 lp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~--~~d~~~r~ 253 (368)
T TIGR00903 215 LEAALRPAGLEDI-AGDAVALAILAGLIG---VAV--IPDRVARA 253 (368)
T ss_pred HHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHH--hhHHhhhh
Confidence 9999988888764 555555555555544 456 67776543
No 17
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.96 E-value=3e-28 Score=210.64 Aligned_cols=244 Identities=14% Similarity=0.094 Sum_probs=191.4
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcc
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 98 (310)
.|.+++|+|+|.++.+++.+.+.+++.+++++.|+++||+|||+++..+..+++++.+.++++++++.++++|+++|++.
T Consensus 32 lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~ 111 (393)
T PRK09705 32 LPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGI 111 (393)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHH
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhccc-CCc
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLP-ETP 177 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~-es~ 177 (310)
+...+....++.|++| ++|+++++.+..+..+|..+++.++..+.+.. .+||+.+.+.++..++..+..+... +.|
T Consensus 112 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~--~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (393)
T PRK09705 112 GIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHS--ETWYQTLAWWALPAVVALFAWWWQSAREV 188 (393)
T ss_pred HHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999997 78999999999999899888888877665432 2699988776665544433333221 111
Q ss_pred hhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHh
Q 021634 178 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 257 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (310)
+ ++ + ++ +...++.+++ +..+...+.++.....+.....+
T Consensus 189 ~-----~~---~--------------------------~~---~~~~~~~l~~----~~~~~l~~~~~~~~~~~~~~~~~ 227 (393)
T PRK09705 189 A-----SS---H--------------------------KT---TTTPVRVVFT----PRAWTLGVYFGLINGGYASLIAW 227 (393)
T ss_pred c-----cc---c--------------------------CC---CcCCcccccC----HhHHHHHHHHHHHHHHHHHHHHH
Confidence 1 00 0 00 0000111111 22222333333344456678889
Q ss_pred HHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 258 APLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 258 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
.|.++++.|.+..+++....+..++.++|.+..++ +.||++||+..+.+
T Consensus 228 lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~--l~~r~~~~~~~~~~ 276 (393)
T PRK09705 228 LPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPA--MARHQDRRKLLMLA 276 (393)
T ss_pred HHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHH--HHhhccchHHHHHH
Confidence 99999889999999999999999999999999999 99999999887654
No 18
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.96 E-value=5.2e-29 Score=220.11 Aligned_cols=270 Identities=12% Similarity=0.025 Sum_probs=196.6
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhh-----hhhHHHHHHHHHH
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA-----AVNVYMLIFGRLL 93 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l 93 (310)
.|.+.+|+|+++++.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.+..++ +++++.+++.|++
T Consensus 52 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 131 (467)
T PRK09556 52 QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWAL 131 (467)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 36789999999999999999999999999999999999999999998888888777766554 5899999999999
Q ss_pred HhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhh-c
Q 021634 94 LGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL-F 172 (310)
Q Consensus 94 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~-~ 172 (310)
+|++.+...+....+++|++|+++|+++++++..+.++|..+++.++..+.......+||..|.+.+++.++..+..+ +
T Consensus 132 ~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~ 211 (467)
T PRK09556 132 SGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRY 211 (467)
T ss_pred HHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999988875544321112599988887777776655444 4
Q ss_pred ccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhcc-ccchhHHHHHHHHHHHHHhhhH
Q 021634 173 LPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQ-RKYRPQLLMAMAIPFFQQVTGI 251 (310)
Q Consensus 173 ~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 251 (310)
.+|+|+..... + .++ . ..+..+. +. +. .+ +.+.+..+.++ ...+++.++...+..++....+
T Consensus 212 ~~~~p~~~~~~-~-~~~---~---~~~~~~~-----~~-~~--~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 274 (467)
T PRK09556 212 GSDSPEELGWG-K-AEE---I---FGEPISE-----ED-KE--TE-STDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVR 274 (467)
T ss_pred CCCChhhcCCC-C-hhh---c---ccCccch-----hh-hc--cc-cccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHH
Confidence 56665321110 0 111 0 0000000 00 00 00 00011111111 1223344555555555555556
Q ss_pred HHHHHhHHHHHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhh
Q 021634 252 NVIAFYAPLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 307 (310)
Q Consensus 252 ~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~ 307 (310)
.....|.|.|+++ .|++..+++.......++..++.+++++ ++||++||+.++.
T Consensus 275 ~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~--lsDr~g~r~~~~~ 329 (467)
T PRK09556 275 IGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGW--LSDLANGRRALVA 329 (467)
T ss_pred HHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHCCCchHHH
Confidence 6788899999965 6999999999999999999999999999 9999999886553
No 19
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.96 E-value=1.1e-27 Score=208.44 Aligned_cols=253 Identities=19% Similarity=0.205 Sum_probs=197.2
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcc
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 98 (310)
.|.+.+|+|.++++.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.+++.++++++.+++.|++.|++.
T Consensus 38 ~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 117 (406)
T PRK11551 38 APRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGL 117 (406)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhH
Confidence 36788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHH-hhcccCCc
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLG-ALFLPETP 177 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~-~~~~~es~ 177 (310)
+...+....++.|++|+++|++++++.+.+..+|..+++.++..+.+ ..+||+.|++.+++.++..+. ..++||+|
T Consensus 118 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (406)
T PRK11551 118 GGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAG---DAAWRHIFYVGGVGPLLLVPLLMRWLPESR 194 (406)
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---ccCHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 99899999999999999999999999999999999999998765543 357999999877665555443 34578877
Q ss_pred hhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHh
Q 021634 178 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 257 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (310)
++..++++ .++.+ ...+..++....++ .......++......+....+
T Consensus 195 ~~~~~~~~-~~~~~------------------------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 242 (406)
T PRK11551 195 AFAQAAGA-GKQRA------------------------------PVLRALFGEGRATA-TLLLWISYFFTLIVLYFLLNW 242 (406)
T ss_pred hHHhccCc-chhhh------------------------------hhHHHHhhhhhhhH-HHHHHHHHHHHHHHHHHHHHH
Confidence 54322111 00000 00011111111111 111222233333345566778
Q ss_pred HHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 258 APLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 258 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
.|.++++.|+++.+.+.......++.+++.++.++ +.||+|||+.+..+
T Consensus 243 ~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~--l~dr~g~~~~~~~~ 291 (406)
T PRK11551 243 LPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGA--LMDRLRPRRVVLLI 291 (406)
T ss_pred HHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhHHHHHHHH
Confidence 89999889999999999999999999999999999 99999999887643
No 20
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.96 E-value=5.2e-28 Score=209.53 Aligned_cols=256 Identities=16% Similarity=0.186 Sum_probs=213.4
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhh--hHHHHHHHHHHHhhcccc
Q 021634 23 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV--NVYMLIFGRLLLGVGVGF 100 (310)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~ 100 (310)
+.+++.|+++.+++.+.++.|+.+++++.|+++||+|-|+++..+.++.++++++...+. +++.+++.|+++|++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 668999999999999999999999999999999999999999999999999999988874 456778999999999999
Q ss_pred cccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc-ccCCchh
Q 021634 101 ANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF-LPETPNS 179 (310)
Q Consensus 101 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~-~~es~~~ 179 (310)
.++....+.+.|.|++||++..++...+..+|.+++.++++.+.+. ..||+++|++.++.+++..+++++ ..|+|..
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s--~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~ 222 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES--SLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK 222 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc--CCCCchHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 9999999999999999999999999999999999999998888865 358999999999999998877755 6777754
Q ss_pred hHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhHH
Q 021634 180 LIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAP 259 (310)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (310)
+. .-+.+|.+.. ++.+.+...+++.+.||++++++ +.++...+..+....+++.+..|.|
T Consensus 223 h~--~is~~El~~I--------------~~~k~~~~~~~~~~vP~~~i~ts----~~vwai~~~~f~~~~~~~~l~~y~P 282 (466)
T KOG2532|consen 223 HP--NISEKELKYI--------------EKGKSEAHVKKKPPVPYKAILTS----PPVWAIWISAFGGNWGFYLLLTYLP 282 (466)
T ss_pred CC--CCCHHHHHHH--------------HhcccccccCCCCCCCHHHHHcC----HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 21 1112221111 11111111111145677777765 6677788888888889999999999
Q ss_pred HHHHHc-CCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccc
Q 021634 260 LLFRTI-GLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWR 302 (310)
Q Consensus 260 ~~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r 302 (310)
.|+++. |++..+.|++.++..+...+..++++. ++||+.+|
T Consensus 283 tY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~--lsD~l~~~ 324 (466)
T KOG2532|consen 283 TYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQ--LSDRLTFR 324 (466)
T ss_pred HHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhc
Confidence 999876 999999999999999999999999999 99998775
No 21
>PRK09952 shikimate transporter; Provisional
Probab=99.96 E-value=1.5e-27 Score=208.91 Aligned_cols=247 Identities=16% Similarity=0.203 Sum_probs=175.8
Q ss_pred ccchhHHHHHH-----HHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHH--------HHHHHHHH
Q 021634 27 KFDSQLLTSFT-----SSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVY--------MLIFGRLL 93 (310)
Q Consensus 27 ~~~~~~~~~~~-----~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l 93 (310)
+.++. .+++. ++.+++..+++++.|+++||+|||+++..+.++++++++++++++++. .++++|++
T Consensus 56 ~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l 134 (438)
T PRK09952 56 QVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAI 134 (438)
T ss_pred CCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Confidence 45555 34443 345667789999999999999999999999999999999999999987 58889999
Q ss_pred HhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccC-----CCchhHHHHHhhHHHHHHHHH
Q 021634 94 LGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIK-----GGWGWRVSLALAAVPASILTL 168 (310)
Q Consensus 94 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~wr~~~~~~~~~~~~~~~ 168 (310)
+|++.|..++....++.|++|+++|++..+..+.+..+|.+++..+...+.... ..++||+.|++.+++.++...
T Consensus 135 ~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~ 214 (438)
T PRK09952 135 QGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALW 214 (438)
T ss_pred HHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988877655443321 246899999998877665544
Q ss_pred HhhcccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhh-hhccccchhHHHHHHHHHHHHH
Q 021634 169 GALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFK-KIIQRKYRPQLLMAMAIPFFQQ 247 (310)
Q Consensus 169 ~~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 247 (310)
.....||+|++...+++ .++ + +.+.+.. ...+++ +.+.......+..
T Consensus 215 l~~~~~es~~~~~~~~~-~~~---------------------------~-~~~~~~~~~l~~~~---~~~~~~~~~~~~~ 262 (438)
T PRK09952 215 VRNGMEESAEFEQQQHE-QAA---------------------------A-KKRIPVIEALLRHP---GAFLKIIALRLCE 262 (438)
T ss_pred HHHhCCCChhHHHHHhh-ccc---------------------------c-cccCCHHHHHHHch---HHHHHHHHHHHHH
Confidence 44457887754322111 000 0 0001111 122221 1222222223333
Q ss_pred hhhHHHHHHhHHHHHH-HcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 248 VTGINVIAFYAPLLFR-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 248 ~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
....+....|.|.+++ +.|++...........++...++.++.++ ++||+|||+.++.+
T Consensus 263 ~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~--l~Dr~grr~~~~~~ 322 (438)
T PRK09952 263 LLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAW--LADRFGRRRVYITG 322 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhCchHHHHHH
Confidence 4455667778888885 45888776655666667777888889999 99999999987754
No 22
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.96 E-value=5.3e-28 Score=214.90 Aligned_cols=281 Identities=10% Similarity=0.031 Sum_probs=201.5
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcc
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 98 (310)
.|.+.+|+|.+.++.+|+.+.+.++..++.+++|+++||+|||++++.+.++..++++++++++|++.++++|+++|++.
T Consensus 29 ~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~ 108 (495)
T PRK14995 29 APTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGA 108 (495)
T ss_pred HHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhhhcc-cccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh-hcccCC
Q 021634 99 GFANQSVPLYLSEMA-PARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPET 176 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es 176 (310)
+...+.....+.+.+ |+++|+++++++.....+|..++|.+++.+.+. .+||+.|++...+.++..+.. +++||+
T Consensus 109 ~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~---~gwr~~f~i~~~~~~~~~~l~~~~l~~~ 185 (495)
T PRK14995 109 AMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH---FYWGSVFLINVPIVLVVMGLTARYVPRQ 185 (495)
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---CChHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 888887777776765 678999999999999999999999999888754 579999999777666655443 457776
Q ss_pred chhhHhccCcHHHHHH----------HHHHhcCCc-chHHHHH-------HHHHhhhccccccchh--hhhccccchhHH
Q 021634 177 PNSLIQRKSDHQKAKL----------MLQRVRGTN-DVEAEFD-------DLLKASSTAKTINHPF--KKIIQRKYRPQL 236 (310)
Q Consensus 177 ~~~~~~~~~~~~~~~~----------~~~~~~~~~-~~~~~~~-------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 236 (310)
++... ++.+..+... ..+...... +...... ....-...+.+.+.+. .+.++++ .
T Consensus 186 ~~~~~-~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~----~ 260 (495)
T PRK14995 186 AGRRD-QPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHR----I 260 (495)
T ss_pred CCCCC-CCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCc----c
Confidence 53211 1111111100 000000000 0000000 0000000011111111 2333332 2
Q ss_pred HHHHHHHHHHHhhhHHHHHHhHHHHHHHc-CCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 237 LMAMAIPFFQQVTGINVIAFYAPLLFRTI-GLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
+....+..+...........+.|.++++. |+++.+++....+..++..++.++.++ +.||+|+|+.+..++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~--l~~r~g~~~~~~~g~ 332 (495)
T PRK14995 261 ILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGI--LVSRLGLRLVATGGM 332 (495)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHcCchHHHHHHH
Confidence 33333333334444556677889999764 999999999999999999999999999 999999998876553
No 23
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.96 E-value=1.5e-27 Score=208.95 Aligned_cols=258 Identities=14% Similarity=0.135 Sum_probs=195.2
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcc
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 98 (310)
.|.+.+++|+|+++.+++.+.+.+++.+++++.|+++||+|||+++.++.++..++.++.+++++++.+.+.|++.|++.
T Consensus 46 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~ 125 (434)
T PRK11663 46 MPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQ 125 (434)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 36788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHH-HhhcccCCc
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTL-GALFLPETP 177 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~-~~~~~~es~ 177 (310)
|...+....++.|++|+++|++++++.+.+..+|..+++.+.+.+.+ .++||+.|++.+++.++..+ ..+++||+|
T Consensus 126 g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~---~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p 202 (434)
T PRK11663 126 GWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL---HYGWRYGMMIAGIIAIVVGLFLCWRLRDKP 202 (434)
T ss_pred HccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cccHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 98889999999999999999999999999999999999998776654 35799999988877665543 345578876
Q ss_pred hhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhcc-ccchhHHHHHHHHHHHHHhhhHHHHHH
Q 021634 178 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQ-RKYRPQLLMAMAIPFFQQVTGINVIAF 256 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (310)
++...+.. .+..++ .. +..++ .++.+.++++.++ ...+++.++...+..+........+..
T Consensus 203 ~~~~~~~~-~~~~~~----------~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (434)
T PRK11663 203 QAMGLPSV-GEWRHD----------AL----ELAQQ---QEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAIND 264 (434)
T ss_pred hhcCCCCc-cccccc----------cc----ccchh---ccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHH
Confidence 53211110 000000 00 00000 0000112222221 112223344444444444445566778
Q ss_pred hHHHHHH-HcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHh
Q 021634 257 YAPLLFR-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRV 299 (310)
Q Consensus 257 ~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~ 299 (310)
|.|.+++ +.|++..+++...+...+++.++.++.++ +.||+
T Consensus 265 ~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~--l~dr~ 306 (434)
T PRK11663 265 WGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGW--GSDKL 306 (434)
T ss_pred HHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhh--hHHHh
Confidence 9999994 56999999999999999999999999999 99998
No 24
>PRK15075 citrate-proton symporter; Provisional
Probab=99.96 E-value=2.4e-27 Score=207.73 Aligned_cols=253 Identities=17% Similarity=0.247 Sum_probs=178.5
Q ss_pred ccccccccccchhHHHHHH-HHH-----HHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHH------
Q 021634 19 DTKISNYCKFDSQLLTSFT-SSL-----YVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYM------ 86 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~------ 86 (310)
.|.+.+|++.++.+.+.+. +.. .++..+++++.|+++||+|||+.++.+.++..+++++++++++++.
T Consensus 38 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 117 (434)
T PRK15075 38 ATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAP 117 (434)
T ss_pred HHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHH
Confidence 3788999998887765443 222 2233578999999999999999999999999999999999998774
Q ss_pred --HHHHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccc-----CCCchhHHHHHhh
Q 021634 87 --LIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQI-----KGGWGWRVSLALA 159 (310)
Q Consensus 87 --l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~wr~~~~~~ 159 (310)
++++|+++|++.+...+....+++|++|+++|++++++...+..+|..+++.++..+... .+.++||+.|++.
T Consensus 118 ~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~ 197 (434)
T PRK15075 118 LLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIG 197 (434)
T ss_pred HHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHH
Confidence 688999999999999998899999999999999999999988888887777776655322 1346899999875
Q ss_pred HHHHHHHHHHhhcccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHH
Q 021634 160 AVPASILTLGALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMA 239 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (310)
.+...+........||++++..+++ +.+.+..+++..++ ++....
T Consensus 198 ~~~~~~~~~~~~~~~e~~~~~~~~~--------------------------------~~~~~~~~~~~~~~---~~~~~~ 242 (434)
T PRK15075 198 CLIVPFIFLIRRSLEETEEFLARKH--------------------------------RPSMREIFRSLAAN---WRIVLA 242 (434)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHhhh--------------------------------ccccccHHHHHHHh---HHHHHH
Confidence 5433222222122333221100000 00000011111111 122222
Q ss_pred HHHHHHHHhhhHHHHHHhHHHHHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 240 MAIPFFQQVTGINVIAFYAPLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
.....+.....++....|.|.|+++ .|++..+++....+..++++++.++.++ +.||+|||+.++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~--l~Dr~g~r~~~~~~ 310 (434)
T PRK15075 243 GMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGA--LSDRIGRRPVLIAF 310 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhcchHHHHHH
Confidence 2233333445567788899999976 5999999998888889999999999999 99999999987653
No 25
>PRK03545 putative arabinose transporter; Provisional
Probab=99.96 E-value=1.2e-27 Score=206.83 Aligned_cols=242 Identities=17% Similarity=0.089 Sum_probs=189.7
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcc
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 98 (310)
.|.+.+|+|+|+++.+++.+.+.+++.+++++.|+++||+|||+++..+.++..++++.++++++++.++++|+++|++.
T Consensus 32 ~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~ 111 (390)
T PRK03545 32 LSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAH 111 (390)
T ss_pred hHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 47789999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh-hcccCCc
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETP 177 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~ 177 (310)
+...+....++.|++|+++|++++++...+..+|..++++++..+.+. .+||+.|++.+++.++..+.. .++||.|
T Consensus 112 ~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~---~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 188 (390)
T PRK03545 112 AIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQY---LGWRTTFLAIGGGALITLLLLIKLLPLLP 188 (390)
T ss_pred HHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHH---hcHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 888888899999999999999999999999999999999998876543 579999999888776665443 3356643
Q ss_pred hhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHh
Q 021634 178 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 257 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (310)
+. ++ ++ ..+.++.++++..+.... .. +...........+
T Consensus 189 ~~----~~--~~-------------------------------~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~ 227 (390)
T PRK03545 189 SE----HS--GS-------------------------------LKSLPLLFRRPALVSLYL---LT-VVVVTAHFTAYSY 227 (390)
T ss_pred CC----Cc--ch-------------------------------HHHHHHHHhCcHHHHHHH---HH-HHHHHHHHHHHHH
Confidence 21 00 00 001123333322222222 11 1112222333456
Q ss_pred HHHHHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhh
Q 021634 258 APLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDI 306 (310)
Q Consensus 258 ~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~ 306 (310)
.+.++++ .|.++.+++.......++++++.++.++ +.||++||++.+
T Consensus 228 ~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~--l~dr~~~~~~~~ 275 (390)
T PRK03545 228 IEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSR--LGNRHPSGFLLI 275 (390)
T ss_pred HHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHH--HhhccchhHHHH
Confidence 6666655 5899999999999999999999999999 999999887644
No 26
>TIGR00895 2A0115 benzoate transport.
Probab=99.96 E-value=3.1e-27 Score=204.70 Aligned_cols=279 Identities=22% Similarity=0.297 Sum_probs=203.5
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcc
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 98 (310)
.|.+.+++|.++.+.+++.+...++..+++++.|+++||+|||+.+..+.++..++.++..++++++.+++.|++.|++.
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 119 (398)
T TIGR00895 40 APAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGL 119 (398)
T ss_pred HHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhccc
Confidence 46788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHH-HHhhcccCCc
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILT-LGALFLPETP 177 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~-~~~~~~~es~ 177 (310)
+...+....++.|++|+++|++++++...+..+|..+++.+++.+.+. .+|++.+++.++..++.. +...++||++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T TIGR00895 120 GGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV---FGWRSLFYVGGIAPLLLLLLLMRFLPESI 196 (398)
T ss_pred ccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc---ccceeehhhhhhHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999998766543 579999988765554443 4445688887
Q ss_pred hhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHh
Q 021634 178 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 257 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (310)
++..++ + .++..+..++.......+.+ ++..++..+++..+...+..++.+..+. .....+..+...........+
T Consensus 197 ~~~~~~-~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 272 (398)
T TIGR00895 197 DFLVSK-R-PETVRRIVNAIAPQMQAEAQ-SALPEQKATQGTKRSVFKALFQGKTARI-TVLLWLLYFMLLVGVYFLTNW 272 (398)
T ss_pred hHHHhc-C-HHHHHHHHHHHHHhcccccc-ccccccccccchhhHHHHHHhcchhHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 654433 2 22222222221111100000 0000000000011111222332222222 222333333444556667788
Q ss_pred HHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhh
Q 021634 258 APLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDI 306 (310)
Q Consensus 258 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~ 306 (310)
.|.+.++.|.++.+.+.......++.+++.++.++ +.||+++|+...
T Consensus 273 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~ 319 (398)
T TIGR00895 273 LPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGW--LADRLGPRVTAL 319 (398)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHhhcchHHHHH
Confidence 89777888999999999999999999999999999 999999985543
No 27
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.96 E-value=9.5e-28 Score=207.60 Aligned_cols=264 Identities=14% Similarity=0.149 Sum_probs=200.4
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcc
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 98 (310)
.|.+++++|.++.+.+++.+++.++..+++++.|+++||+|||+++..+.++..++..+++++++++.++++|++.|++.
T Consensus 17 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 96 (399)
T TIGR00893 17 APMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAE 96 (399)
T ss_pred HHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 36688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhh-cccCCc
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL-FLPETP 177 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~-~~~es~ 177 (310)
+...+....++.|++|+++|++++++.+....+|.++++.+++.+.+. .+||+.|++.+++.++..+..+ +.||+|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (399)
T TIGR00893 97 APFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIH---FSWQWAFIIEGVLGIIWGVLWLKFIPDPP 173 (399)
T ss_pred HhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh---CCchHHHHHHHHHHHHHHHHhhheecCCC
Confidence 999999999999999999999999999999999999999998866543 4699999998887776655544 466655
Q ss_pred hhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHh
Q 021634 178 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 257 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (310)
+.... .. +++..+..++... +. ++.++++..+...++.+++ +.++...+..+...........+
T Consensus 174 ~~~~~-~~-~~~~~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 237 (399)
T TIGR00893 174 QKAKW-LT-EEEKYIVVGGLLA---------EQ-QGKGPSTPKKYQIKELLKD----RRVWGLALGQFLVNIGLGFFLTW 237 (399)
T ss_pred Ccccc-CC-HHHHhhcchhhcc---------cc-ccccccCCCccchHHHhcC----HHHHHHHHHHHHHHhHHHHHHHH
Confidence 32111 01 1111100000000 00 0001111112223333332 33444444445555566777888
Q ss_pred HHHHHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccch
Q 021634 258 APLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRK 303 (310)
Q Consensus 258 ~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~ 303 (310)
.|.++++ .|.++.+.+.......++.+++.+..++ +.||++||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~ 282 (399)
T TIGR00893 238 FPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGR--LSDLLLRRG 282 (399)
T ss_pred HHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHH--HHHHHhhcc
Confidence 9988865 5899999999999999999999999999 999999996
No 28
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.96 E-value=4e-27 Score=208.26 Aligned_cols=256 Identities=13% Similarity=0.073 Sum_probs=196.9
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh--hhHHHHHHHHHHHhhccccc
Q 021634 24 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA--VNVYMLIFGRLLLGVGVGFA 101 (310)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~ 101 (310)
+|++++..+.+++.+.+.+++.+++++.|+++||+|||+++..+.+++.++++++.++ .+++.+++.|+++|++.+..
T Consensus 69 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~ 148 (465)
T TIGR00894 69 PNFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSV 148 (465)
T ss_pred CCCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccc
Confidence 3899999999999999999999999999999999999999999999999998887554 55788999999999999999
Q ss_pred ccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc-ccCCchhh
Q 021634 102 NQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF-LPETPNSL 180 (310)
Q Consensus 102 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~-~~es~~~~ 180 (310)
.+....++.|++|+++|++++++...+..+|..++++++..+.+.. .+||+.|++.+++.++..+.+++ .+|+|+..
T Consensus 149 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~--~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~ 226 (465)
T TIGR00894 149 SPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESW--GGWPMIFYVFGIVGCAWSLLWFVFPADDPSIH 226 (465)
T ss_pred hhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCCeehhhhhHHHHHHHHHHHHHhcCCcccC
Confidence 9999999999999999999999999999999999999987766431 27999999988888777665554 56666422
Q ss_pred HhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhHHH
Q 021634 181 IQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPL 260 (310)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (310)
.. .. +++. +..++ ..++..++.+.+.++++.++ ++.++...+..+......+.+..|+|.
T Consensus 227 ~~-~~-~~~~-~~i~~-------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~lp~ 286 (465)
T TIGR00894 227 PC-IS-KFEK-KYINS-------------SLQGQKGSTRQSLPIKAIPK----SLPVWAIWFAIFGHFWLYTILPTYLPT 286 (465)
T ss_pred CC-CC-HHHH-HHHHh-------------hcccccCCCCCCCCHHHHhc----CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 11 1111 10000 00000001111223444443 344555566666666677788899999
Q ss_pred HHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccch
Q 021634 261 LFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRK 303 (310)
Q Consensus 261 ~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~ 303 (310)
|+++ .|++..+++....+..++..++.+++++ ++||+++|+
T Consensus 287 ~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~--l~d~~~~~~ 328 (465)
T TIGR00894 287 FISWVLRVSGKENGLLSSLPYLFAWLCSIFAGY--LADFLKSSK 328 (465)
T ss_pred HHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHH--HHHHHHHcC
Confidence 9965 5999999999999999999999999999 999987553
No 29
>PRK03699 putative transporter; Provisional
Probab=99.95 E-value=2e-26 Score=199.52 Aligned_cols=245 Identities=12% Similarity=0.094 Sum_probs=190.5
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
|++.+++|+|+++.+++.+.+.+++.+++++.|+++||+|||+++..+.++..++.++.+++++++.+++.|++.|++.+
T Consensus 31 ~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g 110 (394)
T PRK03699 31 GPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSG 110 (394)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhH
Confidence 66889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCchh
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNS 179 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~ 179 (310)
...+....++.|++|+++|+++.+..+....+|..++|.+...+.. ...+||+.|.+.+++.++..+..++ .+.|+.
T Consensus 111 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--~~~gw~~~f~~~~~~~~~~~~~~~~-~~~p~~ 187 (394)
T PRK03699 111 ITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLA--RSIEWYWVYACIGLVYVAIFILTLF-SEFPAL 187 (394)
T ss_pred hhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHHHh-cCCccc
Confidence 8888889999999999999999999888888888888888665432 2257999999888777665544433 222210
Q ss_pred hHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhHH
Q 021634 180 LIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAP 259 (310)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (310)
++++ .+ ++++. .+... ++.++...+..+........+..|.|
T Consensus 188 --~~~~-~~--------------------------~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p 229 (394)
T PRK03699 188 --GKHA-PK--------------------------ADKPV--------AKEKW-GIGVLFLAIAALLYILAQLTFISWVP 229 (394)
T ss_pred --cccC-cc--------------------------ccCcc--------ccccC-ChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 00 00000 00111 12233333344444445567788999
Q ss_pred HHHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhh
Q 021634 260 LLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 307 (310)
Q Consensus 260 ~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~ 307 (310)
.|+++ .|+++.+++...+...++..+|.+..++ +.||+++|+.+..
T Consensus 230 ~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~--l~dr~~~~~~l~~ 276 (394)
T PRK03699 230 EYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSF--IVRFFDLQRILTV 276 (394)
T ss_pred HHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHH--HHHHhchhhHHHH
Confidence 99954 5999999999999999999999999999 9999999988764
No 30
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.95 E-value=5.3e-27 Score=201.76 Aligned_cols=250 Identities=13% Similarity=0.079 Sum_probs=187.3
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcc
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 98 (310)
.|.+.+++|+|+++.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.+.++++++++.++++|++.|++.
T Consensus 26 ~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 105 (377)
T TIGR00890 26 APPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGV 105 (377)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 37788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc-ccCCc
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF-LPETP 177 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~-~~es~ 177 (310)
+..++.....+.|++| ++|+++.+....+.++|..+++++...+.. ..+||+.|++.+++.++..+..++ ++|+|
T Consensus 106 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 181 (377)
T TIGR00890 106 GIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVIN---LEGVPAAFIYMGIIFLLVIVLGAFLIGYPP 181 (377)
T ss_pred HHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHh---cccHHHHHHHHHHHHHHHHHHHHHheecCc
Confidence 8888888888899886 679999999999999998776555443332 357999999988888776655544 55443
Q ss_pred hhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHh
Q 021634 178 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 257 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (310)
+...++++ + . +..+.+.++.++++.... ..+..+...........+
T Consensus 182 ~~~~~~~~---~-------------~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 227 (377)
T TIGR00890 182 GQLIKTNI---E-------------V--------------SVKDYTVWEMLRTPQFWV----LYLSFFLNAVSGLLLIGL 227 (377)
T ss_pred hhccccCc---c-------------c--------------chhhhhHHHHHcCccHHH----HHHHHHHHhHHHHHHHHH
Confidence 21100000 0 0 000011223333322222 222222222223334455
Q ss_pred HHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 258 APLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 258 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
.+.+.++.|.++.+.+.......++..++.+..++ +.||++||+.+..+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--l~dr~g~~~~~~~~ 276 (377)
T TIGR00890 228 YKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGA--LSDKIGRQKTMSIV 276 (377)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhhhHH
Confidence 66677888888888999999999999999999999 99999999887654
No 31
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.95 E-value=3e-27 Score=203.44 Aligned_cols=258 Identities=14% Similarity=0.167 Sum_probs=191.3
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
|.+.+++|.++++.+++.+++.++..+++++.|+++||+|||+++..+.++..++.++.+++++++.+++.|++.|++.+
T Consensus 19 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 98 (379)
T TIGR00881 19 PYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQG 98 (379)
T ss_pred HHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcc
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHH-HHHhhhcccCCCchhHHHHHhhHHHHHHHHHH-hhcccCCc
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAAN-FINYGTEQIKGGWGWRVSLALAAVPASILTLG-ALFLPETP 177 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~-~~~~~es~ 177 (310)
...+....++.|++|+++|+++.++.+.+..+|..+++ .++..+.. ..+||+.|++.+++.++..+. .++.||+|
T Consensus 99 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 99 MGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE---LYSWHWVFIVPGIIAIIVSLICFLLLRDSP 175 (379)
T ss_pred ccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHh---cCCchhHHHHHHHHHHHHHHHHheeeCCCc
Confidence 99999999999999999999999999999999999998 45554443 347999998887777665444 44567765
Q ss_pred hhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhcc-ccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHH
Q 021634 178 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTA-KTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAF 256 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (310)
+....++.+.++. ++.+.+ +++.+++ +..+...++.+++ +.++...+..+........+..
T Consensus 176 ~~~~~~~~~~~~~----------~~~~~~----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 237 (379)
T TIGR00881 176 QSCGLPPAEEMPN----------EEPDGD----AEKKEEELTKKQIFLQYVLLN----KVLWYISLGYVFVYVVRTGILD 237 (379)
T ss_pred cccccCccccCcc----------cccccc----cccccccccchHHHHHHHHhc----chHHHHHHHHHHHHHHHHHHHH
Confidence 4321111100000 000000 0000000 0011112223322 3333344444444445566778
Q ss_pred hHHHHHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhc
Q 021634 257 YAPLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVR 300 (310)
Q Consensus 257 ~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g 300 (310)
+.|.++++ .|+++.+++.......++.+++.++.++ +.||..
T Consensus 238 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~--l~~r~~ 280 (379)
T TIGR00881 238 WSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGW--LSDKLF 280 (379)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHH--HHHHHc
Confidence 88988855 5999999999999999999999999999 999864
No 32
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.95 E-value=9.3e-27 Score=200.75 Aligned_cols=243 Identities=15% Similarity=0.131 Sum_probs=189.0
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
|.+++|+|.+.++.+++.+.+.+++.+++++.|+++||+|||+++..+..+.+++.++++++++++.+++.|++.|++.+
T Consensus 27 ~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~ 106 (382)
T PRK10091 27 TELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHG 106 (382)
T ss_pred HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh-hcccCCch
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETPN 178 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~~ 178 (310)
...+....++.|++|+++|+++++....+..+|..++++++..+.+. .+||+.|++.+++.++..+.. +++||.++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~---~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~ 183 (382)
T PRK10091 107 AFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQE---FSWRYTFLLIAVFNIAVLASIYFWVPDIRD 183 (382)
T ss_pred HHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhh---ccHHHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 88888888899999999999999999999999999999998776643 579999999888776655443 44777532
Q ss_pred hhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhH
Q 021634 179 SLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYA 258 (310)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (310)
. ++. +. + ..+ +.++++ + .+......+....+......+.
T Consensus 184 ~---~~~--~~-~------------------------------~~~-~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~ 222 (382)
T PRK10091 184 E---AKG--GL-R------------------------------EQF-HFLRSP---A-PWLIFAATMFGNAGVFAWFSYI 222 (382)
T ss_pred c---ccc--CH-H------------------------------HHH-HHhcCh---H-HHHHHHHHHHHHHHHHHHHHHH
Confidence 1 000 00 0 000 111111 1 1111222222222233334455
Q ss_pred HHHHH-HcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 259 PLLFR-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 259 ~~~~~-~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
+.+++ ..|+++.+.+.......++.+++.++.++ +.||+++|+++..+
T Consensus 223 ~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~--l~~r~~~~~~~~~~ 271 (382)
T PRK10091 223 KPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGR--LSGRYSPLRIAAVT 271 (382)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHhe--eccccCchhHHHHH
Confidence 55664 46999999999999999999999999999 99999999877653
No 33
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.95 E-value=1.8e-26 Score=199.41 Aligned_cols=239 Identities=17% Similarity=0.165 Sum_probs=186.4
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcc
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 98 (310)
.|.+.+|+|.++++.++..+.+.++..+++++.|+++||+|||+++..+.++..++.+++.++++++.+++.|++.|++.
T Consensus 43 l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 122 (394)
T PRK10213 43 LTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLAL 122 (394)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhh
Confidence 36688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhh-cccCCc
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL-FLPETP 177 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~-~~~es~ 177 (310)
+...+....++.|++|+++|+++.+....+.++|..++|.++..+.+. ++||+.|++.+++.++..+... ..||+|
T Consensus 123 g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~---~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 123 GGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGEL---IGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 999999999999999999999999999999999999999999877653 5799999998776665544433 356643
Q ss_pred hhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHh
Q 021634 178 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 257 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (310)
++. ++ . ..+.++.+++ +.++...+..+...........+
T Consensus 200 ~~~---~~-~---------------------------------~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~ 238 (394)
T PRK10213 200 GEP---SH-Q---------------------------------KQNTFRLLQR----PGVMAGMIAIFMSFAGQFAFFTY 238 (394)
T ss_pred ccc---cc-c---------------------------------hhHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 210 00 0 0011222322 22222222222222233333444
Q ss_pred -HHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccch
Q 021634 258 -APLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRK 303 (310)
Q Consensus 258 -~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~ 303 (310)
.|.+.++.|+++.+.+......+++..++.++.++ +.||.+++.
T Consensus 239 ~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~--l~~r~~~~~ 283 (394)
T PRK10213 239 IRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSF--ILKRSVKLA 283 (394)
T ss_pred HHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHH--HHhccchhH
Confidence 47777778999999999999999999999999999 999955443
No 34
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.95 E-value=3.8e-27 Score=209.61 Aligned_cols=280 Identities=15% Similarity=0.105 Sum_probs=201.8
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcc
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 98 (310)
.|.+.+++|.++++.+++.+.+.++..++.++.|+++||+|||+++..+.++..++.++++++++++.++++|+++|++.
T Consensus 25 ~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~ 104 (485)
T TIGR00711 25 IPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGG 104 (485)
T ss_pred HHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhh
Confidence 47788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh-hcccCCc
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETP 177 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~ 177 (310)
+...+....++.|++|+++|+++.+++..+..+|..+++.+++.+.+ +++||+.|++.+++.++..+.. +++||++
T Consensus 105 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~---~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~ 181 (485)
T TIGR00711 105 GPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIE---NYHWRWIFLINVPIGIIVVVVAFFILPRDK 181 (485)
T ss_pred hhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhcc---CcCceehhhhhhHHHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999999999999999887764 3579999999877776655544 3466644
Q ss_pred hhhHhccCcHHHHH----------HHHHHhcCCc--chHHHHH----------HHHHhhhccccccchhhhhccccchhH
Q 021634 178 NSLIQRKSDHQKAK----------LMLQRVRGTN--DVEAEFD----------DLLKASSTAKTINHPFKKIIQRKYRPQ 235 (310)
Q Consensus 178 ~~~~~~~~~~~~~~----------~~~~~~~~~~--~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (310)
+... ++.+..... ....+..... +...... ........++++..+ .+.++++...
T Consensus 182 ~~~~-~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~- 258 (485)
T TIGR00711 182 PAAS-ENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVD-LRLFKYRNFT- 258 (485)
T ss_pred cccc-CCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccC-HHHHcCCChH-
Confidence 3111 111111000 0000000000 0000000 000000001111111 1233332222
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhHHHHHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 236 LLMAMAIPFFQQVTGINVIAFYAPLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
...+..+.....++....+.|.++++ .|+++.+++....+..++..++.++.++ +.||++||+.+.++.
T Consensus 259 ---~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~--l~~r~~~~~~~~~g~ 328 (485)
T TIGR00711 259 ---IGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGR--MGDKIDPRKLVTIGL 328 (485)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHhhcCcHHHHHHHH
Confidence 22233333334455667788999976 4999999999999999999999999999 999999999876553
No 35
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.95 E-value=3e-29 Score=208.48 Aligned_cols=251 Identities=15% Similarity=0.224 Sum_probs=195.0
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
+++++.+|+++++.|++.+.+.+.+++++|+.|+++|||.||+++.+|..++.++.+.++++..+|++.++|.+.|+|.+
T Consensus 57 ~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeA 136 (493)
T KOG1330|consen 57 KEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEA 136 (493)
T ss_pred HHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc-ccCCch
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF-LPETPN 178 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~-~~es~~ 178 (310)
...++.+.+++|.+|.++|++++++++.+.++|..+|.+++..+..... .|||.|+..+++++++.++.++ .+|.++
T Consensus 137 s~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~--~Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 137 SYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF--WWRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred hhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc--ceEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 9999999999999999999999999999999999999999888777654 4999999999999988777655 566543
Q ss_pred hhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhH
Q 021634 179 SLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYA 258 (310)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (310)
...++.. ++ .+..+.....++|+. ...+.+.+....+++.........+..|.
T Consensus 215 ga~~~~~-------------~~-------------~~~~~~~ts~~kDl~-~l~~~~v~v~~sl~~~a~~fv~Gs~sww~ 267 (493)
T KOG1330|consen 215 GARDEVD-------------GE-------------NKMVKPFTSVWKDLK-VLAKIKVFVLSSLGIIAAQFVIGSLSWWA 267 (493)
T ss_pred ccccccc-------------cC-------------CcCCCCccchHHHHH-HHHccCceeeehHHHHHHHHhccccchhh
Confidence 2111100 00 000111112223321 11111233333334333333344556666
Q ss_pred HHHH----HHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhcc
Q 021634 259 PLLF----RTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRW 301 (310)
Q Consensus 259 ~~~~----~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~ 301 (310)
|.+. +-.|.+..+..++..+...++.+|.+.++. ++||+.|
T Consensus 268 p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggi--isd~~~~ 312 (493)
T KOG1330|consen 268 PAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGI--ISDKLSR 312 (493)
T ss_pred hhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHH--HHHHHHH
Confidence 6555 223788889999999999999999999999 9999654
No 36
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.95 E-value=1.4e-26 Score=199.98 Aligned_cols=249 Identities=13% Similarity=0.095 Sum_probs=194.7
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcc
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 98 (310)
-|.+.+++|.|+++.+++.+.+.++..+++++.|+++||+|||+.+..+.++..++.+...++++++.+.+.|++.|++.
T Consensus 28 ~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 107 (385)
T TIGR00710 28 FPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGA 107 (385)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcch
Confidence 36788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh-hcccCCc
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETP 177 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~ 177 (310)
+...+....++.|++|+++|+++.++.+....+|..+++.+++.+.+. .+||+.+++.++..++..+.. ++.||++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 108 SAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVW---LSWHAIFAFLSLAGILLSALIFFILPETL 184 (385)
T ss_pred hHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999998876643 479999998777776655544 4466654
Q ss_pred hhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHh
Q 021634 178 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 257 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (310)
+...+ ++ .++ . ...+++.++++.... ..+..............+
T Consensus 185 ~~~~~-~~-~~~----------------~--------------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 228 (385)
T TIGR00710 185 PYEAR-IQ-IST----------------Y--------------FETFLLLLKSKMFWG----YALIYGASFGGFFAFFSG 228 (385)
T ss_pred CCccc-CC-HHH----------------H--------------HHHHHHHHcCchhHH----HHHHHHHHHHHHHHHHHc
Confidence 31100 00 000 0 001223333322221 222222223344556667
Q ss_pred HHHHHH-HcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 258 APLLFR-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 258 ~~~~~~-~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
.|.+++ +.|.++.+.+.......++.+++.++.++ +.||+++|+.+..+
T Consensus 229 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~--l~~~~~~~~~~~~~ 278 (385)
T TIGR00710 229 APFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGR--FIKKWGAKSLLRMG 278 (385)
T ss_pred ChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHhcCHHHHHHHH
Confidence 788875 66999999999999999999999999999 99999999876543
No 37
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.95 E-value=1.2e-26 Score=205.10 Aligned_cols=251 Identities=10% Similarity=0.048 Sum_probs=180.8
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
|.+.+|+|+++++.+++.+.+.+++.+++++.|+++||+|||+++..+.++..++.++.+++++++.++++|++.|++.+
T Consensus 60 ~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~ 139 (476)
T PLN00028 60 PIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLA 139 (476)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcc----c--CCCchhHHHHHhhHHHHHHHHHHhhcc
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQ----I--KGGWGWRVSLALAAVPASILTLGALFL 173 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~----~--~~~~~wr~~~~~~~~~~~~~~~~~~~~ 173 (310)
.. .....+++|++|+++|++++++......+|..+++.+...+.. . .+..+||+.|++.+++.++..+..+++
T Consensus 140 ~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~ 218 (476)
T PLN00028 140 TF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTL 218 (476)
T ss_pred hh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 64 3455678999999999999999887766676666555433321 1 112489999999888887776666555
Q ss_pred cCC-chhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHH
Q 021634 174 PET-PNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGIN 252 (310)
Q Consensus 174 ~es-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (310)
+++ |+. . .++.++ + .+ .++.+....+++.++. +..+...+.++.......
T Consensus 219 ~~~~p~~-----~-~~~~~~---~--~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 269 (476)
T PLN00028 219 GQDLPDG-----N-YRELKK---S--GT--------------MPKDSFSKVLRYGVTN----YRTWILALTYGYSFGVEL 269 (476)
T ss_pred cCcCCCC-----c-hhhHHh---c--Cc--------------cccccHHHHHHHHHcC----chhHHHHHHHHHHHHHHH
Confidence 433 321 0 000000 0 00 0000000112222222 222223333333333344
Q ss_pred HHHHhHHHHHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccc
Q 021634 253 VIAFYAPLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWR 302 (310)
Q Consensus 253 ~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r 302 (310)
.+..+.|.++.+ .|+++.+++.+..+..+++.++.+++++ ++||++||
T Consensus 270 ~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~--lsDr~~~r 318 (476)
T PLN00028 270 TMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGY--LSDVAARR 318 (476)
T ss_pred HHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHH--HHHHHHHh
Confidence 566778888754 5999999999999999999999999999 99999876
No 38
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.95 E-value=3.6e-26 Score=196.92 Aligned_cols=250 Identities=15% Similarity=0.150 Sum_probs=193.8
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
|.+.+++|+++++.+++.+++.++..+++++.|+++||+|||+.+..+.++..++.+.+.++++++.+++.|++.|++.+
T Consensus 15 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~ 94 (377)
T PRK11102 15 PVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAA 94 (377)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 66778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh-hcccCCch
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETPN 178 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~~ 178 (310)
...+....++.|++|+++|++++++.+....+|..+++.++..+.+. .+||+.|++.+++.++..+.. +++||+++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (377)
T PRK11102 95 AASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW---FSWHAIFWVLALAAILAAALVFFFIPETLP 171 (377)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 88889999999999999999999999999999999999998777643 469999998777776655443 55777543
Q ss_pred hhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhH
Q 021634 179 SLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYA 258 (310)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (310)
...+++. +.++. ..++++.++++. .+...+..+....+.+.+..+.
T Consensus 172 ~~~~~~~----------------~~~~~--------------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 217 (377)
T PRK11102 172 KERRQPF----------------HLRTT--------------IRNFASLFRHKR----VLGYMLASGFSFAGMFSFLTAG 217 (377)
T ss_pred ccccCCC----------------ChHHH--------------HHHHHHHHcChH----HHHHHHHHHHHHHHHHHHHHcC
Confidence 1100000 00000 011223333321 2222222333333445556666
Q ss_pred HHHHH-HcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 259 PLLFR-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 259 ~~~~~-~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
|.++. +.|+++.+.+.......++.+++.++.++ +.||+|+|+.+..+
T Consensus 218 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~--l~~r~g~~~~~~~~ 266 (377)
T PRK11102 218 PFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSR--FVRRVGALNMLRFG 266 (377)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhCHHHHHHHH
Confidence 76664 46999999999999999999999999999 99999999877654
No 39
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.95 E-value=9.2e-27 Score=198.52 Aligned_cols=253 Identities=21% Similarity=0.309 Sum_probs=190.7
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccc
Q 021634 21 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGF 100 (310)
Q Consensus 21 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 100 (310)
.+.+++|.|+.+.+++.+++.++..+++++.|+++||+|||+++..+.++..++.++..++++++.+++.|++.|++.+.
T Consensus 22 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 101 (352)
T PF07690_consen 22 YLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGF 101 (352)
T ss_dssp HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhcccccccccc
Confidence 78899999999999999999999999999999999999999999999999999966666768888999999999999999
Q ss_pred cccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh-hcccCCchh
Q 021634 101 ANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETPNS 179 (310)
Q Consensus 101 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~~~ 179 (310)
..+....++.|++|+++|+++++..+.+..+|..+++.+++.+.+ ..+||+.|++.++..++..++. ++++++++.
T Consensus 102 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~---~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~ 178 (352)
T PF07690_consen 102 FSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLIS---YFGWRWAFLISAILSLIAAILFILFLPEPPPP 178 (352)
T ss_dssp HHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC---HCHHCCHHHHHHHHHHHHHHHHHCCC---STT
T ss_pred ccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhh---ccccccccccccchhhhhhhhHhhhhhhcccc
Confidence 999999999999999999999999999999999999999887763 3579999999988888876643 445554432
Q ss_pred hHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccc-hhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhH
Q 021634 180 LIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINH-PFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYA 258 (310)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (310)
...+++++++ +++++... .++...+++..+ ......+...........+.
T Consensus 179 ~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 229 (352)
T PF07690_consen 179 RERESPKESE-------------------------SKKPKPLKPGFKSLFKNPVLW----ILLIAFFLFFFVFSGFSFFL 229 (352)
T ss_dssp TT--SSTTTT---------------------------HHHCCCH-CTHHHHHHCCH----HHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccc-------------------------cccccccccccccccccchhh----hhhhhhhHHHHHHHHhhccc
Confidence 2221110000 00000011 133333332221 22222233333455678889
Q ss_pred HHHH-HHcCCC-chhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhh
Q 021634 259 PLLF-RTIGLG-RLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 307 (310)
Q Consensus 259 ~~~~-~~~g~~-~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~ 307 (310)
|.++ +..|++ ..+.+....+..+.+.++.++.++ +.||+++|+....
T Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~ 278 (352)
T PF07690_consen 230 PLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGR--LSDRFGRRRRLLI 278 (352)
T ss_dssp HHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHH--HHHHTTCHHHHHH
T ss_pred chhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHcCcHHHHHH
Confidence 9985 666888 789999999999999999999999 9999998665543
No 40
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1e-26 Score=201.89 Aligned_cols=269 Identities=19% Similarity=0.252 Sum_probs=210.1
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
..+.+|.++..++.+.+.++++++++++.++++.+.||++..+.+....+++++..++....+|++.+++.|++.|+.++
T Consensus 70 ~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es 149 (495)
T KOG2533|consen 70 SGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFES 149 (495)
T ss_pred cCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 34678999999999999999999999999999999999999999999999999988888889999999999999999999
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccC---CCchhHHHHHhhHHHHHHHHHHh-hcccC
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIK---GGWGWRVSLALAAVPASILTLGA-LFLPE 175 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~wr~~~~~~~~~~~~~~~~~-~~~~e 175 (310)
+.+|....+++.|+.+++|+..++++.+..++|.+++++++..+.+.. ...||||.|++.++++++..+.. +++|+
T Consensus 150 ~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~ 229 (495)
T KOG2533|consen 150 GGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPD 229 (495)
T ss_pred ccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecC
Confidence 999999999999999999999999999999999999999988754321 23589999999999888877665 55999
Q ss_pred CchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHH
Q 021634 176 TPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIA 255 (310)
Q Consensus 176 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (310)
.|....-.+ .+|.+-..++. ++........+.++++. ++..+.+.++...+..++.....+++.
T Consensus 230 ~P~~~~fl~--~~ek~~~~~~~-------------~~~~~~~~~~~~~~~~~-~~a~~dp~vw~~~l~~~~~~lv~~~~~ 293 (495)
T KOG2533|consen 230 NPSKAWFLT--DEEKELVVERL-------------RESPSGGIENKFKWKGF-KEALKDPGVWPFSLCYFFLKLVNYGFS 293 (495)
T ss_pred Chhhccccc--hHHHHHHHHHH-------------HhccCCCcccccCHHHH-HHHHhchhHHHHHHHHHHHhhccccHH
Confidence 886321111 11111111111 10101110011122222 233344556667777777777788899
Q ss_pred HhHHHHHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHH----hccchhhh
Q 021634 256 FYAPLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNR----VRWRKLDI 306 (310)
Q Consensus 256 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~----~g~r~~~~ 306 (310)
+|+|.++++ .|++..++..+..+..++++++.++.++ ++|| ..+|....
T Consensus 294 ~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~--lsdr~~~~~~~~~~~~ 347 (495)
T KOG2533|consen 294 YWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGY--LSDRLKTIFARRLLFI 347 (495)
T ss_pred HHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHH--HHHHHhhhHHHHHHHH
Confidence 999999988 4799999999999999999999999999 9999 55555443
No 41
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.95 E-value=1.5e-26 Score=198.48 Aligned_cols=259 Identities=14% Similarity=0.120 Sum_probs=182.7
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhh-hHHHHHHHHHHHhhccc
Q 021634 21 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV-NVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 21 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~ 99 (310)
.+++++|+|+.+.+++.+++.+++.+++++.|+++||+|||+.+..+.++..++.+++++++ +++.+++.|++.|++.+
T Consensus 27 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~ 106 (366)
T TIGR00886 27 MIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGG 106 (366)
T ss_pred HHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhch
Confidence 38899999999999999999999999999999999999999999999999999999999999 99999999999999855
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccc-------CCCchhHHHH-HhhHHHHHHHH-HHh
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQI-------KGGWGWRVSL-ALAAVPASILT-LGA 170 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~~~~~wr~~~-~~~~~~~~~~~-~~~ 170 (310)
..+....+++|++|+++|+++.++......+|..+++.++..+... ....+||+.+ +..++...+.. +..
T Consensus 107 -~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 185 (366)
T TIGR00886 107 -SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIF 185 (366)
T ss_pred -hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHH
Confidence 4566788999999999999999998877777776666665443321 1234799998 44344444333 333
Q ss_pred hcccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhh
Q 021634 171 LFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTG 250 (310)
Q Consensus 171 ~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (310)
.+.+|+|+...+ .++.+. + +.... .+++......+.++++. .+...+..+.....
T Consensus 186 ~~~~~~~~~~~~----~~~~~~--~---~~~~~------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 240 (366)
T TIGR00886 186 FVGADTPPGKPA----TGKLSF--K---GARWS------------VGTGALGDQLKVFRDRH----TWILALLYSVTFGS 240 (366)
T ss_pred HhcccCCccccc----chhccc--c---ccccc------------ccchhHHHHHHHHhccc----hhhHHHHHHHHHHH
Confidence 446666532110 000000 0 00000 00000001223333322 22223333333334
Q ss_pred HHHHHHhHHHHHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhh
Q 021634 251 INVIAFYAPLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 307 (310)
Q Consensus 251 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~ 307 (310)
...+..+.|.++++ .|+++.+++.+.....+.++++.++.++ +.||+|+|+.+..
T Consensus 241 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~--l~~r~g~~~~~~~ 296 (366)
T TIGR00886 241 FLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGA--ISDRLGGARKLLM 296 (366)
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccch--HHHhhccchhHHH
Confidence 55677788888865 5999999999999999999999999999 9999999876554
No 42
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.95 E-value=3.9e-26 Score=198.45 Aligned_cols=242 Identities=13% Similarity=0.152 Sum_probs=185.6
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
|.+.++++.+.++.++..+++.+++.++++++|+++||+|||++++.+.++..++++.+.++++++.++++|+++|++.+
T Consensus 40 ~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~ 119 (413)
T PRK15403 40 INVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSIC 119 (413)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh-hcccCCch
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETPN 178 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~~ 178 (310)
...+....++.|++|+++|++++++...+..+|..++|.+++.+.+. .+||+.|++.++..++..+.. +.+||+++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~---~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 120 FIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF---VHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 66667778899999999999999999999999999999998877643 579999999888877766543 45788653
Q ss_pred hhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhH
Q 021634 179 SLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYA 258 (310)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (310)
. ++++.+. + .. ..+++..+++ +.++...+...........+..+.
T Consensus 197 ~---~~~~~~~-~-------------~~--------------~~~~~~ll~~----~~~~~~~l~~~~~~~~~~~~~~~~ 241 (413)
T PRK15403 197 R---GAVPFSA-K-------------SV--------------LRDFRNVFRN----RLFLTGAATLSLSYIPMMSWVAVS 241 (413)
T ss_pred c---cCCCCCh-H-------------HH--------------HHHHHHHHcC----HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 1 0000000 0 00 0112333333 333333343444444556677788
Q ss_pred HHHHHHc-CCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhcc
Q 021634 259 PLLFRTI-GLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRW 301 (310)
Q Consensus 259 ~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~ 301 (310)
|.++++. |.++.+.++.......+..++..+.+. +.++..+
T Consensus 242 P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~--~~~~~~~ 283 (413)
T PRK15403 242 PVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVAR--FVKDPTE 283 (413)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HhccCCc
Confidence 9888765 899999999888777888887777766 5544333
No 43
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.95 E-value=6.7e-26 Score=197.11 Aligned_cols=249 Identities=15% Similarity=0.140 Sum_probs=188.9
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
+.+.++++.|+++.++..+.+.+++.+++++.|+++||+|||+++..+..+..++.+...++++++.+++.|++.|++.+
T Consensus 37 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~ 116 (406)
T PRK15402 37 LAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLC 116 (406)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhh
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh-hcccCCch
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETPN 178 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~~ 178 (310)
...+....++.|++|+++|++..++......+|..++|.++..+.+. .+||+.+++.++..++..+.. +..||+++
T Consensus 117 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~---~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 117 FIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHV---LPWRGMFVLFAALAALSFFGLWRAMPETAG 193 (406)
T ss_pred hHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---cCccHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 88888889999999999999999998888888999999987766543 479999998887777665544 34676643
Q ss_pred hhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhH
Q 021634 179 SLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYA 258 (310)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (310)
...++.+ . ++ ...++++.++++. ++...+..+...........+.
T Consensus 194 ~~~~~~~-~--------------------~~----------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 238 (406)
T PRK15402 194 RVGEKLS-L--------------------KE----------LGRDYKLVLKNRR----FVAGALALGLVSLPLLAWIALS 238 (406)
T ss_pred ccccccc-H--------------------HH----------HHHHHHHHHcCcH----HHHHHHHHHHHHHHHHHHHHHh
Confidence 1100000 0 00 0011233333322 2222222222222233455567
Q ss_pred HHHHH-HcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 259 PLLFR-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 259 ~~~~~-~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
|.+++ +.|+++.+.+.......++..++.++.++ +.||+++|+.+.++
T Consensus 239 p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~--l~~r~~~~~~~~~~ 287 (406)
T PRK15402 239 PVILISGEQLSSYEYGLLQVPVFGALIAGNLTLAR--LTSRRPLRSLIRMG 287 (406)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHhcCHHHHHHHH
Confidence 87774 46999998888888778888899999999 99999999877654
No 44
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.95 E-value=1e-25 Score=195.08 Aligned_cols=249 Identities=17% Similarity=0.130 Sum_probs=189.6
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcc
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 98 (310)
.|.+.+++|.++.+.++..+.+.++..+++++.|+++||+|||+.+..+.++..++.+.+..+++++.+++.|++.|++.
T Consensus 26 lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~ 105 (392)
T PRK10473 26 LPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGA 105 (392)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhh
Confidence 47788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh-hcccCCc
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETP 177 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~ 177 (310)
+...+....++.|++|+++|+++.+..+....+|..++|.++..+.+ ..+||+.+++.++..++..+.. +++||++
T Consensus 106 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~---~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 106 GCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIML---KFPWQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred hHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CcChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 88888899999999999999999999999999999999999876653 2479999999887776665544 4467764
Q ss_pred hhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHh
Q 021634 178 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 257 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (310)
+.. +++ .++. ....++.++++....... ...........+..+
T Consensus 183 ~~~--~~~-~~~~------------------------------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 225 (392)
T PRK10473 183 PAR--APA-ASSK------------------------------PRENSESLLNRFFLSRLV----ITTLSVTVILTFVNT 225 (392)
T ss_pred Ccc--cCC-ccch------------------------------HHHHHHHHhCHHHHHHHH----HHHHHHHHHHHHHHh
Confidence 211 000 0000 000011222211111111 111111222334455
Q ss_pred HHHHH-HHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 258 APLLF-RTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 258 ~~~~~-~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
.|.++ ++.|+++.+.+.......++.+++.+..++ +.||+|||+.+..++
T Consensus 226 ~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~--l~~r~g~~~~~~~~~ 276 (392)
T PRK10473 226 SPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPF--ALGIFKPRTLMLTSQ 276 (392)
T ss_pred CHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHhcCHHHHHHHHH
Confidence 67666 456999999999999999999999999999 999999999877653
No 45
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.95 E-value=3.4e-25 Score=197.64 Aligned_cols=283 Identities=15% Similarity=0.190 Sum_probs=195.2
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
|.+.+++|+|+.+.+++.+.+.+++.+++++.|+++||+|||+.+..+.++..++.+..+++++++.+++.|++.|++.+
T Consensus 44 ~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~ 123 (496)
T PRK03893 44 TEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMA 123 (496)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 67888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCchh
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNS 179 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~ 179 (310)
...+....++.|++|+++|+++.++...+..+|..+++.++..+.+ .++||+.|++..+..++..+....+||++++
T Consensus 124 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~~ 200 (496)
T PRK03893 124 GEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVP---VWGWRALFFIGILPIIFALWLRKNLPEAEDW 200 (496)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHHhCCCchhh
Confidence 9899999999999999999999999999999999999999876654 3579999987655544444444457777654
Q ss_pred hHhccCcHHHHHHHHHHhcCCcchHHHHHHH-HHh----hhccccccchhh-------------hh-c-cccchhHHHHH
Q 021634 180 LIQRKSDHQKAKLMLQRVRGTNDVEAEFDDL-LKA----SSTAKTINHPFK-------------KI-I-QRKYRPQLLMA 239 (310)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~-------------~~-~-~~~~~~~~~~~ 239 (310)
..++++ .++.++..+.....+......... ... ..........+. .. . ....+++....
T Consensus 201 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (496)
T PRK03893 201 KEKHAG-KAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVM 279 (496)
T ss_pred hhhccc-cccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHH
Confidence 322111 111011111000000000000000 000 000000000000 00 0 00111122222
Q ss_pred HHHHHHHHhhhHHHHHHhHHHHHH-HcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 240 MAIPFFQQVTGINVIAFYAPLLFR-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
.....+..+........++|.+++ +.|+++.+++.+.+...++.+++.++.++ +.||++||+.++.+
T Consensus 280 ~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~--l~dr~g~~~~~~~~ 347 (496)
T PRK03893 280 LMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGF--LGDWLGTRKAYVCS 347 (496)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhcchHHHHHH
Confidence 222222222222245678899995 67999999999999999999999999999 99999999887654
No 46
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.94 E-value=1.5e-25 Score=191.97 Aligned_cols=252 Identities=13% Similarity=0.016 Sum_probs=188.7
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhh-----hHHHHHHHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV-----NVYMLIFGRLLL 94 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~r~l~ 94 (310)
|....+++.++.+.+++.++..++..+++++.|+++||+|||+++..+.++..++.++..+.+ +++.+++.|++.
T Consensus 23 ~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 102 (365)
T TIGR00900 23 PLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGIL 102 (365)
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 345567888999999999999999999999999999999999999999999988888888877 999999999999
Q ss_pred hhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcc-
Q 021634 95 GVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFL- 173 (310)
Q Consensus 95 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~- 173 (310)
|++.+...+...+++.|++|+++|+++.++.+.+..+|..+++.+++.+.+. .+||+.+++.++..++..+..+.+
T Consensus 103 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~ 179 (365)
T TIGR00900 103 AIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYAT---LGIKWAIWVDAVGFAISALLIVSVR 179 (365)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999998877643 479999988777666555444433
Q ss_pred -cCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHH
Q 021634 174 -PETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGIN 252 (310)
Q Consensus 174 -~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (310)
||+++. ++++.++ + ..++. ...++..++++..+... ...+.......
T Consensus 180 ~~~~~~~---~~~~~~~--~-------------~~~~~----------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 227 (365)
T TIGR00900 180 IPELAAS---EIQALSN--A-------------VLRDT----------REGIKFVLKNPLLRTLL----LLALLFNLVFA 227 (365)
T ss_pred cccCCCc---cccccch--h-------------HHHHH----------HhHHHHHHcCcHHHHHH----HHHHHHHHHHH
Confidence 332210 0000000 0 00000 11223333333222222 22222222223
Q ss_pred HHH-HhHHHHHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 253 VIA-FYAPLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 253 ~~~-~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
... .+.|.+.++ .|.++.+.+.......++.+++.+..++ +.||.+||+.+..+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~ 283 (365)
T TIGR00900 228 PAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGL--LGRYFKRMALMTGA 283 (365)
T ss_pred HHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHH--HHHHhchhHHHHHH
Confidence 333 678888876 6999999999999999999999999999 99999999887654
No 47
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.94 E-value=4e-25 Score=198.10 Aligned_cols=269 Identities=17% Similarity=0.107 Sum_probs=191.2
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccccccc
Q 021634 24 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQ 103 (310)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 103 (310)
+.+..+.....+..+++++|.++|++++|+++||+|||++++.+.++..++.+..++++|++.+++.|++.|++.++...
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence 56667788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCchhhHhc
Q 021634 104 SVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNSLIQR 183 (310)
Q Consensus 104 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~ 183 (310)
....++.|++++++|+.+.++ ......++.+++..+.++.. +||+.+++..+++++.++.+++.||+|+|+..+
T Consensus 191 ~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~-----~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~ 264 (521)
T KOG0255|consen 191 VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR-----DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSK 264 (521)
T ss_pred HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHc
Confidence 999999999999999999999 55555555555555554543 699999999999998887767778999999998
Q ss_pred cCcHHHHHHHHHHhcCCc----chHHHHHHH---HHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHH
Q 021634 184 KSDHQKAKLMLQRVRGTN----DVEAEFDDL---LKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAF 256 (310)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (310)
++ .+++.+..++..+.+ +.....+.. +.......+++..+.+.++.+..++......+.++.....+++
T Consensus 265 g~-~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~g--- 340 (521)
T KOG0255|consen 265 GR-IDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYG--- 340 (521)
T ss_pred Cc-hHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHh---
Confidence 88 777777777765432 111111111 1111111122345667776553333333333333222222222
Q ss_pred hHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 257 YAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 257 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
++......|.+... .....+.....+....+. ..|+.|||.....+
T Consensus 341 -l~~~~~~lg~~~~~---~~~~~~~~~~p~~~~~~~--~~~~~gR~~~~~~~ 386 (521)
T KOG0255|consen 341 -LSLNVSGLGGNIYL---NFTLSGLVELPAYFRNGL--LLPEFGRRPPLFLS 386 (521)
T ss_pred -hhhhhhhcCchHHH---HHHHHHHHHhhHHHHHHH--HHHHhCcHHHHHHH
Confidence 22222334433322 222333366666677777 89999999887765
No 48
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.94 E-value=1.9e-25 Score=196.67 Aligned_cols=260 Identities=16% Similarity=0.090 Sum_probs=184.4
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHh
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA----VNVYMLIFGRLLLG 95 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G 95 (310)
|++.++ |+++++.++..+.+.+++.+++++.|+++||+|||+++..+.++.+++.+.++++ .+++.+++.|++.|
T Consensus 53 p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~g 131 (452)
T PRK11273 53 PYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCG 131 (452)
T ss_pred HHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHH
Confidence 567777 9999999999999999999999999999999999999999999999998888775 36778889999999
Q ss_pred hcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHH-HHHHHHhhhcccCCCchhHHHHHhhHHHHHHHH-HHhhcc
Q 021634 96 VGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGAL-AANFINYGTEQIKGGWGWRVSLALAAVPASILT-LGALFL 173 (310)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~-~~~~~~ 173 (310)
++.+...+.....+.|++|+++|++++++++.+..+|.. .++.++..+... .+||+.|++.+++.++.. +..+++
T Consensus 132 i~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~---~gw~~~f~i~~~~~~~~~~l~~~~~ 208 (452)
T PRK11273 132 WFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF---NDWHAALYMPAFAAILVALFAFAMM 208 (452)
T ss_pred HHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999888888888899999999999999999999998864 455443322221 379999999877766654 444567
Q ss_pred cCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhcc-ccchhHHHHHHHHHHHHHhhhHH
Q 021634 174 PETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQ-RKYRPQLLMAMAIPFFQQVTGIN 252 (310)
Q Consensus 174 ~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 252 (310)
||+|+....+ + .++.++ +.. +..++ ++..+.+.++.+. ...+++.++...+..+......+
T Consensus 209 ~~~~~~~~~~-~-~~~~~~---~~~----------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 270 (452)
T PRK11273 209 RDTPQSCGLP-P-IEEYKN---DYP----------DDYNE---KHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRY 270 (452)
T ss_pred cCCHhhcCCC-C-hhhhhh---ccc----------ccccc---ccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHH
Confidence 8876532111 0 111000 000 00000 0000111222211 11223334444444444444456
Q ss_pred HHHHhHHHHHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHh--ccch
Q 021634 253 VIAFYAPLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRV--RWRK 303 (310)
Q Consensus 253 ~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~--g~r~ 303 (310)
....|.|.|+++ .|++..+++....+..++.+++.++.++ ++||+ +||+
T Consensus 271 ~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~--l~dr~~~~r~~ 322 (452)
T PRK11273 271 GILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGW--MSDKVFRGNRG 322 (452)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHccCCcc
Confidence 678899999976 5899999999888889999999999999 99999 4553
No 49
>PRK10133 L-fucose transporter; Provisional
Probab=99.94 E-value=3.2e-25 Score=193.80 Aligned_cols=253 Identities=11% Similarity=0.088 Sum_probs=181.1
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHh---hhhhhHHHHHHHHHHHh
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALG---GAAVNVYMLIFGRLLLG 95 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~r~l~G 95 (310)
.|.+++++++|+.+.+++.+.+.+++.+++++.|+++||+|||+++..+..+..++++++ ..+++++.++++|+++|
T Consensus 49 ~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G 128 (438)
T PRK10133 49 LPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIA 128 (438)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 377899999999999999999999999999999999999999999999999999999875 46789999999999999
Q ss_pred hcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhc-ccC-------------C---C------chh
Q 021634 96 VGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE-QIK-------------G---G------WGW 152 (310)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~-------------~---~------~~w 152 (310)
++.+...+....++.|+.|+++|...++..+..+.+|..+++.++..+. ... + . .+|
T Consensus 129 ~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w 208 (438)
T PRK10133 129 AGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSV 208 (438)
T ss_pred HHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHH
Confidence 9999999999999999877777777899999999999999998876433 110 0 0 256
Q ss_pred HHHHHhhH-HHHHHHHHHh-hcccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccc
Q 021634 153 RVSLALAA-VPASILTLGA-LFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQR 230 (310)
Q Consensus 153 r~~~~~~~-~~~~~~~~~~-~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (310)
|++|+... +..++..+.. ...||.+.. ++ .++ ++.+...+.++.+++
T Consensus 209 ~~~f~~~~~v~~~~~~~~~~~~~p~~~~~----~~-~~~--------------------------~~~~~~~~~~~ll~~ 257 (438)
T PRK10133 209 QTPYMIIVAIVLLVALLIMLTKFPALQSD----NH-SDA--------------------------KQGSFSASLSRLARI 257 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCcc----cc-ccc--------------------------cccchhhhHHHHHhC
Confidence 66775433 3333332222 224542210 00 000 000001112333433
Q ss_pred cchhHHHHHHHHHHHHHhhhHHHHHHhHHHHH-HH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 231 KYRPQLLMAMAIPFFQQVTGINVIAFYAPLLF-RT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
+..+... +..+...........|.+.++ ++ .|+++.+++.......++.++|++.+++ +.||+++|+++..+
T Consensus 258 ~~~~~~~----l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~--l~~r~g~~~~l~~~ 331 (438)
T PRK10133 258 RHWRWAV----LAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTW--LISRFAPHKVLAAY 331 (438)
T ss_pred chHHHHH----HHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHcCHHHHHHHH
Confidence 3322222 222222233344455677664 54 5999999999999999999999999999 99999999886654
No 50
>PRK11043 putative transporter; Provisional
Probab=99.94 E-value=2.8e-25 Score=192.92 Aligned_cols=242 Identities=15% Similarity=0.098 Sum_probs=187.7
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
+.+++++|.++++.++..+++.++..++++++|+++||+|||+.+..+..+..++.+.+.++++++.+++.|++.|++.+
T Consensus 30 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~ 109 (401)
T PRK11043 30 KAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVC 109 (401)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCchh
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNS 179 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~ 179 (310)
...+....++.|++|++++++..+.......+|..++|.+++.+.+. .+||+.+++.++..++..+..++++|+++.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (401)
T PRK11043 110 SAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNH---FGWQAIFATLFAITLLLILPTLRLKPSKKA 186 (401)
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 77777788899999999999999988888889999999988776643 479999998888777766666666654321
Q ss_pred hHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhHH
Q 021634 180 LIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAP 259 (310)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (310)
. ++ ++ .+.++++.++++..+.... ........+.....+.|
T Consensus 187 ~---~~--~~------------------------------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~p 227 (401)
T PRK11043 187 R---KQ--SQ------------------------------DALTFKQLLKSKTYLGNVL----IFAACSAAFFAWLTGSP 227 (401)
T ss_pred c---cc--ch------------------------------HHHHHHHHHcChhHHHHHH----HHHHHHHHHHHHHHHhH
Confidence 0 00 00 0011233333322111111 11122223345566788
Q ss_pred HHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhh
Q 021634 260 LLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLD 305 (310)
Q Consensus 260 ~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~ 305 (310)
.++++.|+++.+.+.......++..+|.+..++ +.||+++|+..
T Consensus 228 ~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~--l~~r~~~~~~~ 271 (401)
T PRK11043 228 FILEQMGYSPADIGLSYVPQTIAFLVGGYGCRA--ALQKWGGEQLL 271 (401)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHcCHHHHH
Confidence 888888999999998888888888899999998 99999988754
No 51
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.94 E-value=1.2e-24 Score=188.15 Aligned_cols=244 Identities=20% Similarity=0.215 Sum_probs=178.1
Q ss_pred cchhHHHHHHHH-----HHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHH--------HHHHHHHHH
Q 021634 28 FDSQLLTSFTSS-----LYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVY--------MLIFGRLLL 94 (310)
Q Consensus 28 ~~~~~~~~~~~~-----~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~ 94 (310)
.++++.+...+. .+++..+++++.|+++||+|||+++..+.++..++.+++++++++. .+++.|+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 106 (394)
T TIGR00883 27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQ 106 (394)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHH
Confidence 344555554433 3334457899999999999999999999999999999999988875 477889999
Q ss_pred hhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccc-----CCCchhHHHHHhhHHHHHHHHHH
Q 021634 95 GVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQI-----KGGWGWRVSLALAAVPASILTLG 169 (310)
Q Consensus 95 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~wr~~~~~~~~~~~~~~~~ 169 (310)
|++.+...+....++.|++|+++|++..+..+.+..+|.++++.++..+... ...++||+.+++.+++.++....
T Consensus 107 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 186 (394)
T TIGR00883 107 GFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL 186 (394)
T ss_pred HhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998887655431 12468999998877776665555
Q ss_pred hhcccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhh
Q 021634 170 ALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVT 249 (310)
Q Consensus 170 ~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (310)
....||++++..++++ +++.+.+.++.++++. ++ ++......+....
T Consensus 187 ~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~ 233 (394)
T TIGR00883 187 RRNLEETPVFEKAQEK-------------------------------HKKKRGPIRETLTKHR-KP-FLLGLGLVIATTT 233 (394)
T ss_pred HHhcCCChhHHHHHhc-------------------------------cccccCCHHHHHHhch-HH-HHHHHHHHHHHHH
Confidence 4556766532211000 0001122333333221 11 2223333344444
Q ss_pred hHHHHHHhHHHHH-HHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhh
Q 021634 250 GINVIAFYAPLLF-RTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDI 306 (310)
Q Consensus 250 ~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~ 306 (310)
.......+.|.++ ++.|.++.+.+.......++..++.++.++ +.||+|||+.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~--l~dr~g~~~~~~ 289 (394)
T TIGR00883 234 TFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGA--LSDRIGRRPVLI 289 (394)
T ss_pred HHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHH--HHHHhchHHHHH
Confidence 5566778889998 456899999999999999999999999999 999999998765
No 52
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.94 E-value=7.5e-25 Score=188.80 Aligned_cols=244 Identities=14% Similarity=0.057 Sum_probs=181.2
Q ss_pred ccccc-ccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHH
Q 021634 20 TKISN-YCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA-----VNVYMLIFGRLL 93 (310)
Q Consensus 20 ~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l 93 (310)
+.+.+ |+++|++|.+++.+++.+++.+..++.|++.||+|.|+++.++.++..+.++..+++ ++++.+++.|++
T Consensus 58 ~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l 137 (462)
T PRK15034 58 VNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALL 137 (462)
T ss_pred HHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHH
Confidence 44444 899999999999999999999999999999999999999999999999999999887 899999999999
Q ss_pred HhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhc-----c----------cCCCchhHHHHHh
Q 021634 94 LGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE-----Q----------IKGGWGWRVSLAL 158 (310)
Q Consensus 94 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~-----~----------~~~~~~wr~~~~~ 158 (310)
.|++ +..++.....+++|+|+++||+++++.....++|..+++++...+. . ..+..+||.+.++
T Consensus 138 ~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~ 216 (462)
T PRK15034 138 CGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWI 216 (462)
T ss_pred HHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHH
Confidence 9997 7788899999999999999999999997666666655444433211 1 0113468888888
Q ss_pred hHHHHHHHHHHhhcc-cCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHH
Q 021634 159 AAVPASILTLGALFL-PETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLL 237 (310)
Q Consensus 159 ~~~~~~~~~~~~~~~-~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (310)
.+++.++..++.++. +|.++ .+.. .....+.+|+ +..
T Consensus 217 ~~~~~iv~~i~~~~~~~~~~~---~~~~-----------------------------------~~~~~~vlk~----~~~ 254 (462)
T PRK15034 217 WVPLLAIATIAAWSGMNDIAS---SRAS-----------------------------------IADQLPVLQR----LHL 254 (462)
T ss_pred HHHHHHHHHHHHHHhCCCccc---cccC-----------------------------------HHHHHHHhCC----Cch
Confidence 777777666555553 33221 0000 0011223333 334
Q ss_pred HHHHHHHHHHhhhHHHHHHhHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 238 MAMAIPFFQQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
+.+.+.++..+..+..+..++|++.++. ++.........+..+.+.++.+++|+ ++||+|+|+++++++
T Consensus 255 Wllslly~~tFG~fvg~s~~lp~~~~~~-~~~~~~l~~~~l~~l~~~l~rplgG~--LADRiG~~~vl~~~~ 323 (462)
T PRK15034 255 WLLSLLYLATFGSFIGFSAGFAMLAKTQ-FPDVNILRLAFFGPFIGAIARSVGGA--ISDKFGGVRVTLINF 323 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-cChHHHHHHHHHHHHHHHHHHHhhHH--HHHhcCchHHHHHHH
Confidence 5556666777777888888999998663 44444443444556778888999999 999999999877653
No 53
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.94 E-value=1.1e-24 Score=186.19 Aligned_cols=243 Identities=19% Similarity=0.195 Sum_probs=182.2
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
|.+++|+|+|+++.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.+.+ .+++.+.+++.|++.|++.+
T Consensus 24 p~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g~~ 102 (355)
T TIGR00896 24 PQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVGIA 102 (355)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999998888888777 77889999999999999998
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCchh
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNS 179 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~ 179 (310)
...+....++.|++| ++|+++.+.++.+..+|..+++.++..+.+... .+||+.|.+.++..++... .++|+.++.
T Consensus 103 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~-~~w~~~f~~~~~~~~~~~~--~~~~~~~~~ 178 (355)
T TIGR00896 103 IINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSG-GHWQQALAWWALPALLALL--AWIPQVRRR 178 (355)
T ss_pred HHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHHH--HHhhhhccc
Confidence 888888888899886 689999999999999999999888776654321 2499988776655443322 234443210
Q ss_pred hHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhHH
Q 021634 180 LIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAP 259 (310)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (310)
. ++ + ++..+...++.+++ +..+...+..+.....+.....+.|
T Consensus 179 ~---~~--~----------------------------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~lp 221 (355)
T TIGR00896 179 V---AA--N----------------------------QTTTRLTPVRIWRS----PLAWQVTVFFGLQSGLYYSLIGWLP 221 (355)
T ss_pred c---CC--C----------------------------CCCCCCCCchhhcC----HhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 0 00000112233332 2222223333333444566778899
Q ss_pred HHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhc-cchhhh
Q 021634 260 LLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVR-WRKLDI 306 (310)
Q Consensus 260 ~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g-~r~~~~ 306 (310)
.++++.|.++.+.+...+...++.+++.++.++ +.||++ ||+.+.
T Consensus 222 ~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~--l~dr~~~~~~~~~ 267 (355)
T TIGR00896 222 AILISHGASAATAGSLLALMQLAQAASALLIPA--LARRVKDQRGIVA 267 (355)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHH--HHhhhccchHHHH
Confidence 999888999999999999999999999999999 999995 555443
No 54
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.94 E-value=4e-25 Score=193.88 Aligned_cols=260 Identities=16% Similarity=0.088 Sum_probs=184.3
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHh
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA----VNVYMLIFGRLLLG 95 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G 95 (310)
|.+++ +|+++++.+++.+++.++..+++++.|+++||+|||+.+..+.++.+++.+..++. ++++.+.+.|++.|
T Consensus 51 p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g 129 (438)
T TIGR00712 51 PYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNG 129 (438)
T ss_pred HHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHH
Confidence 45554 59999999999999999999999999999999999999999999999988877654 46777888999999
Q ss_pred hcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHH-Hhhccc
Q 021634 96 VGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTL-GALFLP 174 (310)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~-~~~~~~ 174 (310)
++.+..++.....+.|++|+++|++++++.+.+..+|..+++.+...... ...+||+.|++.+++.++..+ ..+++|
T Consensus 130 ~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~--~~~~w~~~f~~~~~~~~i~~~~~~~~~~ 207 (438)
T TIGR00712 130 WFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMA--WFNDWHAALYFPAICAIIVALFAFAMMR 207 (438)
T ss_pred HHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHH--HhhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99998888888999999999999999999999999998888776543322 124799999998888776554 445578
Q ss_pred CCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchh-hhhccccchhHHHHHHHHHHHHHhhhHHH
Q 021634 175 ETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPF-KKIIQRKYRPQLLMAMAIPFFQQVTGINV 253 (310)
Q Consensus 175 es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (310)
|+|+....++ .++.++ +...+. . ++.+.+.+.+..+ +..+++ +.++...+..+......+.
T Consensus 208 ~~~~~~~~~~--~~~~~~-----~~~~~~----~---~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 269 (438)
T TIGR00712 208 DTPQSCGLPP--IEEYRN-----DYPDDY----N---EKAEQELTAKEIFMQYVLPN----KLLWYIAIANVFVYLLRYG 269 (438)
T ss_pred CCHHhcCCCC--chhccc-----cccccc----c---cccccccchHHHHHHHHccC----chHHHHHHHHHHHHHHHHH
Confidence 8764321110 000000 000000 0 0000000000011 112222 2333333333333344566
Q ss_pred HHHhHHHHHHHc-CCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccc
Q 021634 254 IAFYAPLLFRTI-GLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWR 302 (310)
Q Consensus 254 ~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r 302 (310)
+..|.|.++++. |+++.+++....+..+.++++.+.+++ +.||++++
T Consensus 270 ~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~--l~dr~~~~ 317 (438)
T TIGR00712 270 VLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGW--MSDKVFKG 317 (438)
T ss_pred HHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHH--HHHHhccC
Confidence 778999999764 999999999999999999999999999 99999644
No 55
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.94 E-value=3e-26 Score=207.45 Aligned_cols=270 Identities=15% Similarity=0.177 Sum_probs=197.8
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhh----------------
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV---------------- 82 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~---------------- 82 (310)
.+.++++|+++..+.|++.+.+.++++++.++.++++||+|||+.+.++.++.+++++++++.+
T Consensus 56 l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~ 135 (633)
T TIGR00805 56 LTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTG 135 (633)
T ss_pred chhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccc
Confidence 4789999999999999999999999999999999999999999999999999999999887653
Q ss_pred -----------------------------------hHHHHHHHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHH
Q 021634 83 -----------------------------------NVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQF 127 (310)
Q Consensus 83 -----------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 127 (310)
.+..++++|+++|+|.+..++...+++.|++|+++|+++.++++.
T Consensus 136 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~ 215 (633)
T TIGR00805 136 NLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILES 215 (633)
T ss_pred cccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHH
Confidence 245677899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcccCCC-----------------c--hhHHHHHhhHHHHHHHHHHhhcccCCchhhHhccCcHH
Q 021634 128 SIGIGALAANFINYGTEQIKGG-----------------W--GWRVSLALAAVPASILTLGALFLPETPNSLIQRKSDHQ 188 (310)
Q Consensus 128 ~~~~g~~~~~~~~~~~~~~~~~-----------------~--~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~~ 188 (310)
+..+|..+++++++.+...... | .|+..|++.+++.++..+..+++|++.+....+.+ .+
T Consensus 216 ~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~-~~ 294 (633)
T TIGR00805 216 IAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRVN-VD 294 (633)
T ss_pred HHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCcccccc-hh
Confidence 9999999999998876643210 1 37778888888887776666667765321110000 00
Q ss_pred HHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhHHHHHHH-cCC
Q 021634 189 KAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRT-IGL 267 (310)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~ 267 (310)
..++ +......+. ...+ .........+.++...+++.++...+..+.....++.+..|+|.|+++ .|+
T Consensus 295 ~~~~--~~~~~~~~~--~~~~-------~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~ 363 (633)
T TIGR00805 295 VHET--EKLEKSEDK--SRKK-------NSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGI 363 (633)
T ss_pred hhhh--hcccccccc--cchh-------hhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 0000 000000000 0000 000000111122233344566666666666677788899999999975 699
Q ss_pred CchhHHHHHHHHHh-hhhhhhhHHHHHHHHHHhccc
Q 021634 268 GRLKVCQLSKWIEC-GGSIGFGRNMWVKWMNRVRWR 302 (310)
Q Consensus 268 ~~~~~~~~~~~~~~-~~~~g~~~~~~~~l~d~~g~r 302 (310)
++.+++.+.....+ +.++|.+++++ ++||++.+
T Consensus 364 s~~~ag~l~~~~~i~~~~vG~~l~G~--l~~r~~~~ 397 (633)
T TIGR00805 364 SSAEANFLIGVVNLPAAGLGYLIGGF--IMKKFKLN 397 (633)
T ss_pred cHHHHHHHhhhhhhhHHHHHHhhhhh--eeeeeccc
Confidence 99999999888766 56899999999 99998843
No 56
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.93 E-value=1.5e-24 Score=175.24 Aligned_cols=281 Identities=19% Similarity=0.156 Sum_probs=217.6
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
|.+.+..|.+..+..+++...+.+..+++..+|.++|++|||+.+.......++..++.+.++|+..+.+.|.+.|+|.|
T Consensus 102 ~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~g 181 (528)
T KOG0253|consen 102 PALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVG 181 (528)
T ss_pred HHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCC
Confidence 55667778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCchh
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNS 179 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~ 179 (310)
+ .|...++-.|..|..+|...+-+. ..+.+|.+....+++..... +||||.....+.+..+..+..+++|||||+
T Consensus 182 g-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~---~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf 256 (528)
T KOG0253|consen 182 G-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSN---FGWRYLLFTSSTPLMFAARFLVWVYESPRF 256 (528)
T ss_pred C-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHhHHHHHHHHHhhcccCcch
Confidence 8 888888889999999998876666 89999999999998766543 589999988888888888888999999999
Q ss_pred hHhccCcHHHHHHHHHHhcCCcchH-----------HHHHHHH-----HhhhccccccchhhhhccccchhHHHHHHHHH
Q 021634 180 LIQRKSDHQKAKLMLQRVRGTNDVE-----------AEFDDLL-----KASSTAKTINHPFKKIIQRKYRPQLLMAMAIP 243 (310)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
...+++ +++|.+.++++...|..+ .++++.+ ......++.+....+++..+.++.++....+.
T Consensus 257 ~~~~G~-~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iw 335 (528)
T KOG0253|consen 257 YLAKGD-DYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIW 335 (528)
T ss_pred hhhcCC-hHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHH
Confidence 998888 888888888776655221 0111100 11122234455667778777777777655554
Q ss_pred HHHHhhhHHHHHHhHHHHHHHcC--------------------CCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccch
Q 021634 244 FFQQVTGINVIAFYAPLLFRTIG--------------------LGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRK 303 (310)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~g--------------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~ 303 (310)
+...+ .+++........++... .+...-..-..+..+..+.|.++.++ ++||+|||+
T Consensus 336 fgnaf-syyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~--iverlGRKk 412 (528)
T KOG0253|consen 336 FGNAF-SYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGV--IVERLGRKK 412 (528)
T ss_pred HhhHH-HHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHH--HHHHhcchh
Confidence 44444 34444444444443321 12233445567788999999999999 999999999
Q ss_pred hhhhcc
Q 021634 304 LDIYTL 309 (310)
Q Consensus 304 ~~~~~~ 309 (310)
.+...+
T Consensus 413 TMal~l 418 (528)
T KOG0253|consen 413 TMALSL 418 (528)
T ss_pred HHHHHH
Confidence 987543
No 57
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.93 E-value=1.8e-24 Score=186.89 Aligned_cols=250 Identities=13% Similarity=0.081 Sum_probs=183.4
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
+.+.+|++.++.+.+++.+.+.+.+.+.++++|+++||+|||++++.+.++..++++.+.++.+. ++.|+++|++.+
T Consensus 27 ~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a 103 (393)
T PRK11195 27 IALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAA 103 (393)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence 34568889999999999999999999999999999999999999999999999988887776664 678999999999
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCchh
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNS 179 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~ 179 (310)
...|...+++.|++|+++|++++++.+....+|..++|.+++.+.+. .|+..+.+.+...++..+..+.+||++++
T Consensus 104 ~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~----~~~~~~~i~~~~~~~~~~~~~~l~~~~~~ 179 (393)
T PRK11195 104 AYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP----HAEAALAVCALIYLLAALFNLFIPRLGAR 179 (393)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcCCCCccc
Confidence 99999999999999999999999999999999999999999988753 37777766655555444555668886532
Q ss_pred hHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhHH
Q 021634 180 LIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAP 259 (310)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (310)
...++.+..+ ...+.. ..++..++++..+.......+.+. .........|
T Consensus 180 ~~~~~~~~~~----------------~~~~~~----------~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 229 (393)
T PRK11195 180 RPGQSWNPIA----------------LLRDFF----------HACRVLWRDKLGRFSLAGTTLFWG----AGATLRFLVL 229 (393)
T ss_pred ccccCCCHHH----------------HHHHHH----------HHHHHHHhCchhHHHHHHHHHHHH----HHHHHHHHHH
Confidence 1111110000 000000 011233434333332222222111 2233445556
Q ss_pred HHHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 260 LLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 260 ~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
.++++ .|.++.+.+.......++.+++.+..++ +.||.++|+.+..+
T Consensus 230 ~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~--l~~~~~~~~~~~~g 277 (393)
T PRK11195 230 AWAPVALGITLNQPAYLQAVVAIGIAVGAGAAAR--LVTLETVLRVLPAG 277 (393)
T ss_pred HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHH--HhcCCcccchHHHH
Confidence 66654 5999999999999999999999999999 89998888766544
No 58
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.93 E-value=2.8e-24 Score=186.33 Aligned_cols=248 Identities=12% Similarity=0.085 Sum_probs=182.6
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhh---hhhHHHHHHHHHHHhh
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA---AVNVYMLIFGRLLLGV 96 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~ 96 (310)
|.+++++|+++.+.+++.+.+.+++.+++++.|++.||+|||+++..+.++.+++.++... .++++.+++.|++.|+
T Consensus 27 ~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~ 106 (410)
T TIGR00885 27 PQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTA 106 (410)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHh
Confidence 7789999999999999999999999999999999999999999999999999999887544 3689999999999999
Q ss_pred cccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccC-----------------------CCchhH
Q 021634 97 GVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIK-----------------------GGWGWR 153 (310)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----------------------~~~~wr 153 (310)
+.|...+....++.+..|+++|++.+++.+...++|..+++.++..+.... +..+||
T Consensus 107 g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 186 (410)
T TIGR00885 107 GLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQ 186 (410)
T ss_pred hHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999877654221 113699
Q ss_pred HHHHhhHHHHHHHHHHhhc--ccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhcccc
Q 021634 154 VSLALAAVPASILTLGALF--LPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRK 231 (310)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~--~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (310)
++|++.+++.++..+...+ .||.++ ++ ++ +.....+.++.++++
T Consensus 187 ~~fl~~a~~~~~~~~~~~~~~~p~~~~-----~~--~~---------------------------~~~~~~~~~~~~~~~ 232 (410)
T TIGR00885 187 TPYMIIGAVVLAVALLIMLTKMPALNH-----SD--AK---------------------------QISFSASLSRLARIR 232 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCc-----cc--cc---------------------------cccchhhHHHHHhCh
Confidence 9998888777665544433 333211 00 00 000001112233332
Q ss_pred chhHHHHHHHHHHHHHhhhHHHHHHhHHHHHHHc--CCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhh
Q 021634 232 YRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRTI--GLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 307 (310)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~ 307 (310)
.... ..+..+...........+++.|.++. +.+...+.........+..+|++++++ +.||+++|+++.+
T Consensus 233 ~~~~----~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~--l~~r~~~~~~l~i 304 (410)
T TIGR00885 233 HYRE----GVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTW--LISYLAAHKVLMA 304 (410)
T ss_pred hHHH----HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHcCHHHHHHH
Confidence 2222 22233333334445567788888665 444455555666666788999999999 9999999987653
No 59
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.93 E-value=3e-24 Score=184.75 Aligned_cols=245 Identities=15% Similarity=0.117 Sum_probs=177.6
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHH-HHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLM-GGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 98 (310)
.++++++|.|+.+.+++.+.+.+...+.+++.|+++||+|||+.++. +..+..++.++++++++++.+++.|++.|.+.
T Consensus 22 ~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 101 (375)
T TIGR00899 22 LFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFA 101 (375)
T ss_pred HHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhh
Confidence 35788999999999999999999999999999999999999887654 56666677788888999999999999998887
Q ss_pred cccccchhhhhhhcccccchhhh--hhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh-hcccC
Q 021634 99 GFANQSVPLYLSEMAPARYRGAI--NNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPE 175 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~e 175 (310)
+...+....+..|+.|+++|++. .+....+.++|..+++.+++.+.+. .+||+.|++.+++.++..+.. +++||
T Consensus 102 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~---~~~~~~f~~~~~~~~~~~~~~~~~~~~ 178 (375)
T TIGR00899 102 STANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG---FGFTVMFLTAALAFVLCGVLVWLFLPS 178 (375)
T ss_pred hhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh---cccHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 77778888888898887777654 5777788889999999998877643 579999999888777665554 44788
Q ss_pred CchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHH
Q 021634 176 TPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIA 255 (310)
Q Consensus 176 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (310)
+|++..++++ +.+.++.++++..+.......+ .........
T Consensus 179 ~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 219 (375)
T TIGR00899 179 YPRGAPGALT-----------------------------------RLEVRGLLASRDTRLLFVACTL----MWGCNILYI 219 (375)
T ss_pred cccCcccccC-----------------------------------cchhhhhhcCcchHHHHHHHHH----HHHHHHHHH
Confidence 6642110000 0001112222222222221111 112223345
Q ss_pred HhHHHHH-HHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 256 FYAPLLF-RTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 256 ~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
.+.|.++ ++.|.++.+.+.......+...++.++.++ +.||++||+.+..+
T Consensus 220 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~--l~~r~g~~~~~~~~ 271 (375)
T TIGR00899 220 INMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGY--LIKRFGKRRLMLLA 271 (375)
T ss_pred hhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHH--HHHHhcchhHHHHH
Confidence 5667777 456999999988887777777888889999 99999999887654
No 60
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.93 E-value=1e-24 Score=180.09 Aligned_cols=248 Identities=16% Similarity=0.175 Sum_probs=197.7
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhH---HHHHHHHHHHhh
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNV---YMLIFGRLLLGV 96 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~r~l~G~ 96 (310)
+.+.+|+++|++|.+++.++..+...+..++.|.+.||||.|++..++.++..+-++..+++.+. +++++++++.|+
T Consensus 38 ~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~ 117 (417)
T COG2223 38 VFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGL 117 (417)
T ss_pred hhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhc
Confidence 66779999999999999999999999999999999999999999999999999999999988554 499999999999
Q ss_pred cccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc-ccC
Q 021634 97 GVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF-LPE 175 (310)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~-~~e 175 (310)
+ |..+.+...++++++|+|++|.++++.. ..++|..+...++..+......-.|+....+..+..++..+..++ +.|
T Consensus 118 ~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d 195 (417)
T COG2223 118 A-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMND 195 (417)
T ss_pred c-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 7 5678888899999999999999999999 777887777666655543321112999988888887776666544 665
Q ss_pred CchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHH
Q 021634 176 TPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIA 255 (310)
Q Consensus 176 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (310)
.|......++ .. ..+.++. .+++..+.+.+.++..+.++..+.
T Consensus 196 ~p~~r~~~~~-~~--------------------------------~~~~~~v----~~~~~~W~lsllY~~tFG~Fvgfs 238 (417)
T COG2223 196 VPEHRASVKP-QL--------------------------------PAQLKAV----FSNKDTWLLSLLYFATFGGFVGFS 238 (417)
T ss_pred Chhhhccccc-cc--------------------------------hhHHHHH----hcCcchHHHHHHHHHHHHHHHHHH
Confidence 5532111100 00 0112222 223446667788888889999999
Q ss_pred HhHHHHHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 256 FYAPLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 256 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
.++|.|+++ +|.++.+++.......+.+.+.+..+|+ ++||+|.++++...
T Consensus 239 ~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~--LsDR~Gg~rv~~~~ 290 (417)
T COG2223 239 AYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGW--LSDRIGGRRVTLAV 290 (417)
T ss_pred HHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccch--hhhhccchhHHHHH
Confidence 999999965 5999999999999999999999999999 99999988877653
No 61
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.93 E-value=3.2e-24 Score=184.98 Aligned_cols=240 Identities=13% Similarity=0.098 Sum_probs=176.2
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
|.+.+++|.|+.+.+++.+.+.+++.+++++.|+++||+|||+.+..+.++..++...++++++++.++++|+++|++.+
T Consensus 30 p~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~ 109 (381)
T PRK03633 30 PLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCA 109 (381)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 66777899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccC-CCchhHHHHHhhHHHHHHHH-HHhhcccCCc
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIK-GGWGWRVSLALAAVPASILT-LGALFLPETP 177 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~wr~~~~~~~~~~~~~~-~~~~~~~es~ 177 (310)
...+.....+.+..++++|+++++.+..+..+|..+++.++..+.+.. ....|+.. ....... +.....+|++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 184 (381)
T PRK03633 110 MIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVTG-----LVLAAILPLLFTRILNQQ 184 (381)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHH-----HHHHHHHHHHHhcccCCC
Confidence 888887777888899999999999999999999999999987765431 11223322 1111111 1111122210
Q ss_pred hhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHh
Q 021634 178 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 257 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (310)
+ ++ ++..+.++.++++..+. .....+.....+.....+
T Consensus 185 ~-----~~---------------------------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 222 (381)
T PRK03633 185 A-----EN---------------------------------HDSTSIWPMLKLRQARL----GVNGCIISGIVLGSLYGL 222 (381)
T ss_pred C-----CC---------------------------------CCCCCHHHHHHhcchHH----HHHHHHHHHHHHHHHHHH
Confidence 0 00 00011122233222111 111111222223445567
Q ss_pred HHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 258 APLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 258 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
.|.++++.|.++.+.+.+.....++.+++.+..++ +.||+++|+.+..+
T Consensus 223 lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~--l~dr~~~~~~l~~~ 271 (381)
T PRK03633 223 MPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGR--LADRFGRLLVLRVQ 271 (381)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHH--HHHHcCcHHHHHHH
Confidence 89999888999999999999999999999999999 99999999887643
No 62
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.93 E-value=5.7e-24 Score=184.62 Aligned_cols=246 Identities=11% Similarity=0.059 Sum_probs=175.4
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhh---h-hhhHHHHHHHHHHHhhc
Q 021634 22 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGG---A-AVNVYMLIFGRLLLGVG 97 (310)
Q Consensus 22 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~---~-~~~~~~l~~~r~l~G~~ 97 (310)
+.+|+|.|+++.+++.+.+.++..+++++.|+++||+|||+++..+..+..++.+++. . ..+++.+++.|++.|++
T Consensus 39 ~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g 118 (402)
T TIGR00897 39 FLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLG 118 (402)
T ss_pred HHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcc
Confidence 4478899999999999999999999999999999999999999999999988876542 3 35788888999999999
Q ss_pred ccccccchhhhhhhcccccchhhhhhHHHHHHHHHH-HHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh-hcccC
Q 021634 98 VGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGA-LAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPE 175 (310)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~e 175 (310)
.+...+.....+.|++|+++|++++++.+.+.++|. .+++.++..+.+. .||+..++......++..+.. ++.+|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (402)
T TIGR00897 119 YPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA---FGEMNTLWSALAFVLTGGVIALFSNKD 195 (402)
T ss_pred hHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---cchHHHHHHHHHHHHHHHHHHHhccCC
Confidence 887777777888999999999999999999999996 5788887655432 455444443322222222222 33444
Q ss_pred CchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHH
Q 021634 176 TPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIA 255 (310)
Q Consensus 176 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (310)
.++.. ++++ +++ .++. ...++..++++ .++...+..+........+.
T Consensus 196 ~~~~~-~~~~-~~~-----------------~~~~----------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 242 (402)
T TIGR00897 196 IFTPQ-HMQT-REK-----------------FSEL----------GKAATILFTNP----NVLLGGMVRIINTIGLFGFA 242 (402)
T ss_pred CCCcc-cccC-Ccc-----------------hhhH----------HHHHHHHHcCh----hHHHHHHHHHHHHHHHHHHH
Confidence 32100 0000 000 0000 01122333332 23333333344445566778
Q ss_pred HhHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhh
Q 021634 256 FYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLD 305 (310)
Q Consensus 256 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~ 305 (310)
.+.|.++++.|+++.+.+.......++..++.+..++ +.||++||+..
T Consensus 243 ~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~--l~dr~~~~~~~ 290 (402)
T TIGR00897 243 VFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGI--VGDKLGWMNTV 290 (402)
T ss_pred HHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHH--HHHhhcchhHH
Confidence 8999999889999999999888899999999999999 99999988765
No 63
>PRK10504 putative transporter; Provisional
Probab=99.93 E-value=9.5e-24 Score=187.12 Aligned_cols=278 Identities=14% Similarity=0.120 Sum_probs=196.2
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcc
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 98 (310)
.|.+.+|+|.++.+.+++.+.+.++..++.+++|+++||+|||+++..+..+..++.+.+.++++++.+++.|+++|++.
T Consensus 33 ~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~ 112 (471)
T PRK10504 33 LPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGG 112 (471)
T ss_pred HHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhh
Confidence 46678899999999999999999999999999999999999999999999999999998889999999999999999999
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc-ccCCc
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF-LPETP 177 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~-~~es~ 177 (310)
+...+....++.|++|+++|+++.+......++|..++|.+++.+.+. .+||+.|++......+..+.... .|+++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~---~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 189 (471)
T PRK10504 113 AMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY---ASWHWIFLINIPVGIIGAIATLMLMPNYT 189 (471)
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 999999999999999999999999999999999999999998877653 47999999877766655544433 45443
Q ss_pred hhhHhccCcHHHHHH-H-----HHH-hcCCcc---hHHHHH-----------HHHHhhhccccccchhhhhccccchhHH
Q 021634 178 NSLIQRKSDHQKAKL-M-----LQR-VRGTND---VEAEFD-----------DLLKASSTAKTINHPFKKIIQRKYRPQL 236 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~-~-----~~~-~~~~~~---~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (310)
... ++.+...... . ... ..+.+. ...... -...+....+++..+. +.++++ .
T Consensus 190 ~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~----~ 262 (471)
T PRK10504 190 MQT--RRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSL-KLFRTR----T 262 (471)
T ss_pred ccC--CCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCH-HHhccc----c
Confidence 211 1111111000 0 000 000000 000000 0000000111111111 233332 2
Q ss_pred HHHHHHHHHHHhhhHHHHHHhHHHHHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 237 LMAMAIPFFQQVTGINVIAFYAPLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
+.......+...........+.|+|++. .|.++.++++......++..++..+.+. +.||+|+|+++..+
T Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~--l~~r~g~~~~~~~~ 333 (471)
T PRK10504 263 FSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQ--VVNRFGYRRVLVAT 333 (471)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHcCchHHHHHH
Confidence 2223333333333445567788888875 6999999999998888888888888999 99999999987754
No 64
>PRK12382 putative transporter; Provisional
Probab=99.92 E-value=1.1e-23 Score=182.31 Aligned_cols=237 Identities=14% Similarity=0.079 Sum_probs=167.6
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhh--------hhhhHHHHHHHHH
Q 021634 21 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGG--------AAVNVYMLIFGRL 92 (310)
Q Consensus 21 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~r~ 92 (310)
++++|+|.|+.+.+++.+.+.+++.++++++|+++||+|||++++.+.+...++.+... ..++++.++++|+
T Consensus 41 ~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 120 (392)
T PRK12382 41 FVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRL 120 (392)
T ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999998887776654321 1357889999999
Q ss_pred HHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc
Q 021634 93 LLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF 172 (310)
Q Consensus 93 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~ 172 (310)
++|++.+...+....++.|++|+++|++++++.+.+...|..+++.++..+.+. .+||+.+.+..+..++.......
T Consensus 121 l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~ 197 (392)
T PRK12382 121 ILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSH---FGFAALALTTMVLPLLAWAFNGT 197 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhc---cChHHHHHHHHHHHHHHHHHHHh
Confidence 999999888888888999999999999999999999999999999998776543 47998776654443333322222
Q ss_pred ccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHH
Q 021634 173 LPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGIN 252 (310)
Q Consensus 173 ~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (310)
.||.++. +++ +.+.++..+... ++... . ........
T Consensus 198 ~~~~~~~---~~~-----------------------------------~~~~~~~~~~~~-~~~~~-~----~l~~~~~~ 233 (392)
T PRK12382 198 VRKVPAH---AGE-----------------------------------RPSLWSVVGLIW-KPGLG-L----ALQGVGFA 233 (392)
T ss_pred ccCCCCC---ccc-----------------------------------CchHHHHHHHHH-HhHHH-H----HHHHHHHh
Confidence 3332110 000 000111111101 11111 1 11112334
Q ss_pred HHHHhHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 253 VIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 253 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
....+.|.++++.|++. .+.......++.+++.+..++ +.||+|+|+.+..+
T Consensus 234 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~--l~~r~g~~~~~~~~ 285 (392)
T PRK12382 234 VIGTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGW--MPDRFGGVKVAIVS 285 (392)
T ss_pred HHHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHH--HHHhcCCCeehHHH
Confidence 45667778887777653 455566667778888899999 99999999887654
No 65
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.92 E-value=1.3e-23 Score=179.69 Aligned_cols=254 Identities=13% Similarity=0.060 Sum_probs=179.2
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhh-----CchhHH-HHHHHHHHHHHHHhhhh---hhHHHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF-----GRKPSV-LMGGAAFLAGSALGGAA---VNVYMLIFG 90 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----Grr~~~-~~~~~~~~~~~~~~~~~---~~~~~l~~~ 90 (310)
|.+.+|+|+|.++.++..+. .+...+ .+++|+++||+ ||||.+ +.+.++..++....++. .+.+.+...
T Consensus 12 ~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~ 89 (356)
T TIGR00901 12 PYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGL 89 (356)
T ss_pred HHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHH
Confidence 55677899999999999755 444444 99999999998 898874 56777777776666666 456667777
Q ss_pred HHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCC-----CchhHHHHHhhHHHHHH
Q 021634 91 RLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKG-----GWGWRVSLALAAVPASI 165 (310)
Q Consensus 91 r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----~~~wr~~~~~~~~~~~~ 165 (310)
.++.+.+.+...+...+++.|++|+|+|+++.++...+..+|.++++.++..+....+ .++||..|++.++..++
T Consensus 90 ~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~ 169 (356)
T TIGR00901 90 AFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILP 169 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHH
Confidence 7888888888888889999999999999999999999999999999999876654432 23499999998887777
Q ss_pred HHHHhhc-ccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHH
Q 021634 166 LTLGALF-LPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPF 244 (310)
Q Consensus 166 ~~~~~~~-~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
..+..++ .||+++.. +.+.++. .+ .+.++++.++++..++..... +..
T Consensus 170 ~~~~~~~~~~e~~~~~---~~~~~~~-----------------~~----------~~~~~~~~~~~~~~~~~~~~~-~~~ 218 (356)
T TIGR00901 170 GLLVTLFLAKEPQEDA---SVPKPLT-----------------QA----------VLKPIREFFQRKNMIQALLLL-LLI 218 (356)
T ss_pred HHHHHHHhccCCCccc---ccchhHH-----------------HH----------HHHHHHHHHHhcCchHHHHHH-HHH
Confidence 6655554 56643210 0000000 00 011223333333222232222 222
Q ss_pred HHHhhhHHHHHHhHHHHHHHcCCCchhHHHHHHHHH-hhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 245 FQQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIE-CGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
+.....+.....+.|.++++.|+++++.+......+ +..+++.+++++ +.||+|+|+.++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~--l~~r~g~~~~l~~~ 281 (356)
T TIGR00901 219 VLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGI--IMQPLNILYALLLF 281 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHH--HHhhhhHHHHHHHH
Confidence 233344556777889998889999999988887665 577899999999 99999998876654
No 66
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.92 E-value=1.6e-23 Score=181.89 Aligned_cols=238 Identities=18% Similarity=0.127 Sum_probs=171.4
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh--------hhHHHHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA--------VNVYMLIFGR 91 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~r 91 (310)
.++++++|.|+.+.+++.+++.+++.+++++.|+++||+|||+++..+.++..++.+.+.++ .+++.+++.|
T Consensus 40 ~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 119 (399)
T PRK05122 40 GYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGR 119 (399)
T ss_pred HHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHH
Confidence 34678899999999999999999999999999999999999999999999888876655443 2567889999
Q ss_pred HHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhh
Q 021634 92 LLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL 171 (310)
Q Consensus 92 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~ 171 (310)
++.|++.+...+....++.|++|+++|++++++...+..+|..+++.++..+.+. .+|++.+++..+..++..+...
T Consensus 120 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~ 196 (399)
T PRK05122 120 LLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHW---GGLAGLGLLIMLLALLGLLLAR 196 (399)
T ss_pred HHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999899999999999999999999999999999999998776643 5799988776665544333332
Q ss_pred cccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhH
Q 021634 172 FLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGI 251 (310)
Q Consensus 172 ~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (310)
..|++++. +++ +.++++.+++..... ... ......+
T Consensus 197 ~~~~~~~~---~~~-----------------------------------~~~~~~~~~~~~~~~--~~~----~~~~~~~ 232 (399)
T PRK05122 197 PRPAVPPV---KGE-----------------------------------RLPFRRVLGRVWPYG--MGL----ALASIGF 232 (399)
T ss_pred cCCCCCCC---Ccc-----------------------------------chhHHHHHHHHHHHH--HHH----HHHHHHH
Confidence 23332110 000 000111111100011 111 1112223
Q ss_pred HHHHHhHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 252 NVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 252 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
.....+.|.++++.|. .+.+.......++.+++.+..++ +.||+++|+.+..+
T Consensus 233 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~--l~~r~~~~~~~~~~ 285 (399)
T PRK05122 233 GTIATFITLYYAARGW--DGAALALTLFGVAFVGARLLFGN--LINRLGGLRVAIVS 285 (399)
T ss_pred HHHHHHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHH--HHHHhccHHHHHHH
Confidence 4455677777777666 34456666778888899999999 99999999887654
No 67
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.92 E-value=3.8e-23 Score=175.99 Aligned_cols=224 Identities=25% Similarity=0.386 Sum_probs=193.1
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
+.+.++++.++++.++..+...++..+++++.|+++||+|||+.+..+..+..++.+...+.++++.+.+.|++.|++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 102 (352)
T cd06174 23 PLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGG 102 (352)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccc
Confidence 45667779999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCchh
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNS 179 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~ 179 (310)
...+....++.|++|+++|++..++.+....+|..+++.++..+.+. .+||+.+++.++..++..+...+++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~----- 174 (352)
T cd06174 103 ALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAES---LGWRWLFLILAILGLLLALLLLFLL----- 174 (352)
T ss_pred cccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 99999999999999999999999999999999999999998877654 3599999988887777665554442
Q ss_pred hHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhHH
Q 021634 180 LIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAP 259 (310)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (310)
+.++...+..+...........+.|
T Consensus 175 -------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (352)
T cd06174 175 -------------------------------------------------------RLLLLLALAFFLLSFGYYGLLTYLP 199 (352)
T ss_pred -------------------------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 1122333444444556677788899
Q ss_pred HHHHHc-CCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccch-hhhhc
Q 021634 260 LLFRTI-GLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRK-LDIYT 308 (310)
Q Consensus 260 ~~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~-~~~~~ 308 (310)
.+.++. |.+..+.+.......++..++.++.++ +.||++||+ .+..+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~ 248 (352)
T cd06174 200 LYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGL--LSDRLGRRRLLLLIG 248 (352)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhhhHHHHHH
Confidence 999776 999999999999999999999999999 999999998 66544
No 68
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.92 E-value=2e-23 Score=180.90 Aligned_cols=240 Identities=15% Similarity=0.215 Sum_probs=182.4
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
|.+.+++|.|+.+.++..+.+.++..+++++.|+++||+|||+++..+.++..++.+.+.++++++.+++.|++.|++.+
T Consensus 32 ~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 111 (394)
T PRK11652 32 ADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTG 111 (394)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhh
Confidence 66789999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHH-hhcccCCch
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLG-ALFLPETPN 178 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~-~~~~~es~~ 178 (310)
...+....+..|.+++++|+++.+....+..++..++|.+++.+.+. .+||+.|++.++..++..+. .++.||+++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~---~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 112 VGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTL---FGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 77777788889999999999999999999999999999998876543 47999999887766655443 455777643
Q ss_pred hhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhH
Q 021634 179 SLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYA 258 (310)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (310)
.. ++ .++. ...+++.++++..+.... ..+........+..+.
T Consensus 189 ~~---~~-~~~~------------------------------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 230 (394)
T PRK11652 189 AD---AR-RTRV------------------------------LASYRTLLSNRRFNCYLL----MLIGTLAGIAVFEACS 230 (394)
T ss_pred cc---cc-hhHH------------------------------HHHHHHHHcChHHHHHHH----HHHHHHHHHHHHHHhC
Confidence 11 00 0000 011222333222222121 1222223334455566
Q ss_pred HHHHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccc
Q 021634 259 PLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWR 302 (310)
Q Consensus 259 ~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r 302 (310)
+.++++ .|.++.+.+.......++.+++..+.++ +.||.+++
T Consensus 231 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~--l~~~~~~~ 273 (394)
T PRK11652 231 GVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGR--PNKRFSTL 273 (394)
T ss_pred hHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHH
Confidence 777766 6999999998888888888888888888 88888743
No 69
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.91 E-value=2.4e-23 Score=183.22 Aligned_cols=259 Identities=13% Similarity=0.090 Sum_probs=181.9
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHH-HHHHHhhcc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIF-GRLLLGVGV 98 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~ 98 (310)
+.+.+++|.|.++.+++.+.+.++..++.++.|+++||+|||++++.+.++..+++++++++++++.+++ .|++.|++.
T Consensus 43 ~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~ 122 (455)
T TIGR00892 43 KELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGL 122 (455)
T ss_pred HHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcc
Confidence 5678999999999999999999999999999999999999999999999999999999999999998865 579999998
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcc-cCCc
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFL-PETP 177 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~-~es~ 177 (310)
+...+....++.++++ ++|+++.++.+.+..+|..+++.+++.+.+. ++||+.|++.+++.++..+..+++ ++.+
T Consensus 123 ~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~---~gwr~~f~~~~~~~~~~~v~~~~~~~~~~ 198 (455)
T TIGR00892 123 AFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFES---FGWRGSFLILGGLLLHCCVCGALMRPVGP 198 (455)
T ss_pred hhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHH---hChHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 8776777788889995 7899999999999999999999987766543 479999999888777665554443 3222
Q ss_pred hhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHh
Q 021634 178 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 257 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (310)
.... .+ .+ .++ ...++++.++ . .. ....++..+..+ .+.+++ +.++......+.....+.....+
T Consensus 199 ~~~~--~~-~~-~~~---~~~~~~~~~~-~-~~-~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~ 263 (455)
T TIGR00892 199 SQRV--SK-SK-SKE---GLPPDGSTKK-L-SK-KSTAEKINRFLD-FSLFTH----RGFLVYLSGNVIMFLGFFAPIIF 263 (455)
T ss_pred cccc--cc-cc-ccc---cCCCCCcccc-c-cc-cchhhhhhhhcc-hHHhcC----chHHHHHHHHHHHHHHccchHHH
Confidence 1100 00 00 000 0000000000 0 00 000000000000 122322 22333333333333444556678
Q ss_pred HHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHh
Q 021634 258 APLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRV 299 (310)
Q Consensus 258 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~ 299 (310)
+|.|.++.|+++.+++...++.+++.+++.+..++ +.||.
T Consensus 264 l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~--l~d~~ 303 (455)
T TIGR00892 264 LVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGL--IAGLK 303 (455)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH--Hhccc
Confidence 88888888999999999999999999999999999 89873
No 70
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.91 E-value=1.2e-23 Score=174.62 Aligned_cols=275 Identities=20% Similarity=0.241 Sum_probs=192.1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhh-------hHHHHHHHHHHHhhccc
Q 021634 27 KFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV-------NVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~~ 99 (310)
++++.-.+.+..+..+|.++||+++|++.||+|||+++...+++.++++++++++. -.+.+...|++.|+|.|
T Consensus 80 ~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIG 159 (538)
T KOG0252|consen 80 HYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIG 159 (538)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhcccc
Confidence 45677789999999999999999999999999999999999999999999877652 24567778999999999
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhc----ccCCC--------chhHHHHHhhHHHHHHHH
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE----QIKGG--------WGWRVSLALAAVPASILT 167 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~--------~~wr~~~~~~~~~~~~~~ 167 (310)
+-+|...+..+|....++||...+.+.+....|.+.+.+++..+. ...+. .-||..+.+..++.+.++
T Consensus 160 GDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~l 239 (538)
T KOG0252|consen 160 GDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVL 239 (538)
T ss_pred CCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888777666666666555554333 22111 259999999999999888
Q ss_pred HHhhcccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhh-hccccchh--HHHHHHHHHH
Q 021634 168 LGALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKK-IIQRKYRP--QLLMAMAIPF 244 (310)
Q Consensus 168 ~~~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~ 244 (310)
...+.+||++++....+++.+++.+..++... . +.++..+. +...+.+.+... ..+...++ +.++.....+
T Consensus 240 y~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~---~--~~~~~~~~-~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~W 313 (538)
T KOG0252|consen 240 YFRLKMPETARYTALVSKKLKQAAGDMKKVLS---V--DIEAESTA-ESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTW 313 (538)
T ss_pred HhhhcCCcchhHHHHhhcCHhhhhhccccccc---c--ccchhhcc-ccCCCCcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 88888999998875444444444322111111 1 11111111 111111112222 22222222 5566677777
Q ss_pred HHHhhhHHHHHHhHHHHHHHcCCCchhHHH--------HHHH-HHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 245 FQQVTGINVIAFYAPLLFRTIGLGRLKVCQ--------LSKW-IECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~-~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
+..-.+++..+.+...+++..|+.+.+... ...+ ...+.++|..+..+ ++|++|||++.+-|+
T Consensus 314 FllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~--~id~iGRk~iq~~GF 385 (538)
T KOG0252|consen 314 FLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVY--FIDIIGRKYIQLMGF 385 (538)
T ss_pred HhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEE--EeehhhhHHHHHhhH
Confidence 877788889999999999988876654333 2222 23334446666667 899999999988765
No 71
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.90 E-value=2.9e-22 Score=173.65 Aligned_cols=242 Identities=13% Similarity=0.129 Sum_probs=175.6
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
+++++++|+|+.+.++..+...+...+.+++.|+++||+|||+++..+.++..++.+.+.++++++.+.+.|++.|++.+
T Consensus 35 ~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~ 114 (400)
T PRK11646 35 IRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGT 114 (400)
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh-hcccCCch
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETPN 178 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~~ 178 (310)
...+...+++.|++|+++|+++.++......+|..++|.+++.+.. ++||+.|++.++..++..+.. ++.||.+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~----~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 190 (400)
T PRK11646 115 LFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ----YDFRLVCATGAVLFVLAAAFNAWLLPAYKL 190 (400)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hhHHHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 8888888999999999999999999999999999999999887763 479999998777766554433 44554211
Q ss_pred hhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhH
Q 021634 179 SLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYA 258 (310)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (310)
++. .++ .+.++++.++++.... ..+..+...........+.
T Consensus 191 ----~~~-~~~------------------------------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 231 (400)
T PRK11646 191 ----STV-RTP------------------------------VREGMTRVLRDKRFVT----YVLTLTGYYMLAVQVMLML 231 (400)
T ss_pred ----ccc-chh------------------------------hHHHHHHHHcCchHHH----HHHHHHHHHHHHHHHHHhh
Confidence 000 000 0011223333322111 1111111111222345678
Q ss_pred HHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHH-Hhccchhhh
Q 021634 259 PLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMN-RVRWRKLDI 306 (310)
Q Consensus 259 ~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d-~~g~r~~~~ 306 (310)
|.++++.+.++.+.+.+.....+....+....+. +.| |++.++.+.
T Consensus 232 p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~--~~~~r~~~~~~~~ 278 (400)
T PRK11646 232 PIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIAR--WSEKRFRLEHRLM 278 (400)
T ss_pred hhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHH--HHHHhcchhHHHH
Confidence 8988887667788888877776666555544454 554 455454443
No 72
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.90 E-value=3.1e-22 Score=174.23 Aligned_cols=247 Identities=14% Similarity=0.061 Sum_probs=171.3
Q ss_pred cccccccccchhH-----HHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Q 021634 20 TKISNYCKFDSQL-----LTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLL 94 (310)
Q Consensus 20 ~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 94 (310)
|.+.+++|.+..+ .+++.++..++..+++++.|+++||+|||+.+..+.++..++.++..++++++.+++.|++.
T Consensus 38 ~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (408)
T PRK09874 38 PLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALL 117 (408)
T ss_pred HHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4455667777544 48889999999999999999999999999999999999999999888899999999999999
Q ss_pred hhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh-hcc
Q 021634 95 GVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFL 173 (310)
Q Consensus 95 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~ 173 (310)
|++.+ ..+....++.|++|+++|+++.++...+..+|..+++.+++.+.+. .+||+.+++.++..++..+.. ++.
T Consensus 118 g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (408)
T PRK09874 118 GLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADS---YGLRPVFFITASVLFLCFLVTLFCI 193 (408)
T ss_pred HHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99754 4567778889999999999999999999999999999998876543 469999998887776665544 446
Q ss_pred cCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHH
Q 021634 174 PETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINV 253 (310)
Q Consensus 174 ~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (310)
||+++... + .++ . +.+ +..+.++++. .........+........
T Consensus 194 ~~~~~~~~---~-~~~-~--------------~~~--------------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 237 (408)
T PRK09874 194 RENFQPVS---K-KEM-L--------------HMR--------------EVVTSLKNPK---LVLSLFVTTLIIQVATGS 237 (408)
T ss_pred ccCccccc---c-hhh-h--------------HHH--------------HHHHhCcCCc---hHHHHHHHHHHHHHHHHH
Confidence 66432110 0 000 0 000 0011111111 111111111111122334
Q ss_pred HHHhHHHHHHHcCCCchh----HHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 254 IAFYAPLLFRTIGLGRLK----VCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 254 ~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
...+.+.+.++.+.+..+ .+....+..++.+++.+..++ +.||++||+.+..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~--l~dr~g~~~~~~~~ 294 (408)
T PRK09874 238 IAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGK--LGDRIGPEKILITA 294 (408)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhccccchhHHHH
Confidence 455667777654333222 344555667778888888888 99999999987654
No 73
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.90 E-value=1e-22 Score=177.79 Aligned_cols=249 Identities=12% Similarity=0.040 Sum_probs=183.1
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhh-----hhhHHHHHHHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA-----AVNVYMLIFGRLLL 94 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~ 94 (310)
|.+.++++.++.+.+++.+...++..+++++.|+++||+|||+++..+..+..++.+..+. .++++.+++.|++.
T Consensus 41 ~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 120 (417)
T PRK10489 41 PVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWD 120 (417)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 5556677889999999999999999999999999999999999998888777776654432 46788888999999
Q ss_pred hhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhccc
Q 021634 95 GVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLP 174 (310)
Q Consensus 95 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~ 174 (310)
|++.+...+....++.|+.|+++|+++.++......+|..+++.+++.+... .+|++.+++.++..++..+..+.+|
T Consensus 121 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~---~~~~~~~~~~~~~~~~~~~~~~~l~ 197 (417)
T PRK10489 121 GFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAA---GGVAWNYGLAAAGTFITLLPLLRLP 197 (417)
T ss_pred HHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHhCC
Confidence 9998887888888999999999999999999999999999999998876643 3699999887777766666666677
Q ss_pred CCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHH
Q 021634 175 ETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVI 254 (310)
Q Consensus 175 es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (310)
|+++...++++ + .++. ...++..++++..+.... ..+... .....
T Consensus 198 ~~~~~~~~~~~---~-----------------~~~~----------~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~ 242 (417)
T PRK10489 198 ALPPPPQPREH---P-----------------LRSL----------LAGFRFLLASPVVGGIAL----LGGLLT-MASAV 242 (417)
T ss_pred CCCCCCccccc---c-----------------hHHH----------HHHHHHHHcChHHHHHHH----HHHHHH-HHHhH
Confidence 76432100000 0 0000 011222233322222211 111111 12445
Q ss_pred HHhHHHHHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 255 AFYAPLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 255 ~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
..+.|.+.++ .|.++.+.+.+.....++.+++.++.++ +.||.++++.+..+
T Consensus 243 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~--l~~~~~~~~~l~~~ 295 (417)
T PRK10489 243 RVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGW--LAHSARPGLLMLLS 295 (417)
T ss_pred HHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHH--hhhccCcchHHHHH
Confidence 6778888877 6999999999999999999999999999 89987776665543
No 74
>PRK10054 putative transporter; Provisional
Probab=99.90 E-value=1.4e-22 Score=175.24 Aligned_cols=245 Identities=11% Similarity=0.007 Sum_probs=176.2
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
+++++++|+++.+.+++.+.+.++..+++++.|+++||+|||+++.++.++..++.++.+++++++.++++|.+.|.+.+
T Consensus 32 ~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 111 (395)
T PRK10054 32 IYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYS 111 (395)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 56778899999999999999999999999999999999999999999999999999989999999999989999888777
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh-hcccCCch
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETPN 178 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~~ 178 (310)
...+....+..|..|+++|+++.++.....++|..++|.+++.+.. .+|+..|++.++..++..+.. +++||+++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~----~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~ 187 (395)
T PRK10054 112 VFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM----QSINLPFWLAAICSAFPLVFIQIWVQRSEK 187 (395)
T ss_pred HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hccCcHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 7778888999999999999999999999999999999999887763 379999998877776655444 33555432
Q ss_pred hhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhH
Q 021634 179 SLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYA 258 (310)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (310)
.. ++ +++ + ..+.++.++++..........+..+ .......+.
T Consensus 188 ~~---~~-~~~--~----------------------------~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~ 229 (395)
T PRK10054 188 AI---AT-ETG--S----------------------------VWSPSVLLQDKALLWFTCSGFLASF----VSGAFASCI 229 (395)
T ss_pred cc---cc-chh--h----------------------------hhhhhhhccCceehHHHHHHHHHHH----HHHHhhhhH
Confidence 10 00 000 0 0001223333222222221111111 122233344
Q ss_pred HHHH---HHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 259 PLLF---RTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 259 ~~~~---~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
+.+. ++.+.+....+.......+.........+. +.||.++|+.+..+
T Consensus 230 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~l~~~ 280 (395)
T PRK10054 230 SQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGR--RLNAANIRPLMTAG 280 (395)
T ss_pred HHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHH--HHccCCchhHHHHH
Confidence 4444 334556666677777766666666677777 89999999887654
No 75
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.90 E-value=1.2e-22 Score=172.41 Aligned_cols=263 Identities=12% Similarity=0.100 Sum_probs=179.1
Q ss_pred cccccccccchhH-HHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcc
Q 021634 20 TKISNYCKFDSQL-LTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 20 ~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 98 (310)
|++.+|+|+|++| .+.+.++++.++++++++.|+++||+|.|+++.++.+.+++.+++.++++++..+.+.|++.|++.
T Consensus 50 p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaE 129 (511)
T TIGR00806 50 PYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTM 129 (511)
T ss_pred HHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788999999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHH---HhhHHHHHHHHHHhhcccC
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSL---ALAAVPASILTLGALFLPE 175 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~---~~~~~~~~~~~~~~~~~~e 175 (310)
|+.. ....++..|+|+++|+++.++...+..+|.+++++++..+. .+|||+.. ++......+.+++.+++|.
T Consensus 130 A~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~----s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~ 204 (511)
T TIGR00806 130 AARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV----TLGWISYSTLNIISLVFMTFSVFLALFLKR 204 (511)
T ss_pred HHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hcCchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999 99999999999999999999999999999999999988743 24677644 4444444555666788886
Q ss_pred CchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhh---ccccchhHHHHHHHHHHHHHhhhHH
Q 021634 176 TPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKI---IQRKYRPQLLMAMAIPFFQQVTGIN 252 (310)
Q Consensus 176 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (310)
.++....++++..+ .....+.....+... .+ .....+.......+.+ ++..+.++.++...+.+....++++
T Consensus 205 ~~~sl~f~~~~~~~-~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~ 279 (511)
T TIGR00806 205 PKRSLFFNRLEDVR-GALPCELDQMVPGPG--GK--LEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYY 279 (511)
T ss_pred Cchhhhhccccccc-cccccccccCCCCCc--cc--cchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHH
Confidence 55544333221100 000000000000000 00 0000000000111111 1222333444444444455555666
Q ss_pred HHHHhHHHHHHHcCC-CchhHHHHHHHHHhhhhhhhhHHHH
Q 021634 253 VIAFYAPLLFRTIGL-GRLKVCQLSKWIECGGSIGFGRNMW 292 (310)
Q Consensus 253 ~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~g~~~~~~ 292 (310)
-+..|....-++..- .+...|..-++..+.+.++.+..|+
T Consensus 280 qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~ 320 (511)
T TIGR00806 280 LITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGF 320 (511)
T ss_pred HHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHh
Confidence 677777666666622 2224555666666667777777777
No 76
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.90 E-value=1.1e-21 Score=169.76 Aligned_cols=243 Identities=15% Similarity=0.073 Sum_probs=164.9
Q ss_pred cccccccccchhHHHHHHHHHHH-HHHHHHhhhHHHHhhhCchhHH-HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYV-AGLVASFVASSVTRAFGRKPSV-LMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVG 97 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~Grr~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 97 (310)
.++.+|+|.|+++.+++.+...+ +..++.++.++ +||+|||+.+ ..+.+...++..+.+++++++.+++.+.+.|..
T Consensus 40 ~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 118 (393)
T PRK15011 40 IFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSF 118 (393)
T ss_pred HHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 56788999999999999876655 55566655565 9999999875 455666667777788899999877665555544
Q ss_pred ccccccchhhhhhhcccccch--hhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh-hccc
Q 021634 98 VGFANQSVPLYLSEMAPARYR--GAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLP 174 (310)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~ 174 (310)
.+...+....+..|+.++++| +...+..+.+.++|..++|++++.+.+. .|||..|++.++..++..+.. +++|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~---~gw~~~f~~~~~~~~~~~~~~~~~~~ 195 (393)
T PRK15011 119 GSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMG---FSFTVMYLSAAVAFIVCGVMVWLFLP 195 (393)
T ss_pred HHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHh---cChHHHHHHHHHHHHHHHHHHHhhcC
Confidence 556677777888888776655 3445788889999999999999887653 479999999887776665544 4478
Q ss_pred CCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHH
Q 021634 175 ETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVI 254 (310)
Q Consensus 175 es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (310)
|+++... + ++ . + ....+ ++ . +..+...... .........+
T Consensus 196 ~~~~~~~---~--~~-~-------------------------~---~~~~~---~~-~-~~~~~~~~~~-~~~~~~~~~~ 235 (393)
T PRK15011 196 SMRKELP---L--AT-G-------------------------T---LEAPR---RN-R-RDTLLLFVIC-TLMWGTNSLY 235 (393)
T ss_pred ccCCCCc---c--cc-c-------------------------c---ccccc---cc-c-ccHHHHHHHH-HHHHHHHHHH
Confidence 7642110 0 00 0 0 00000 00 0 0111111111 1122233445
Q ss_pred HHhHHHHHH-HcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 255 AFYAPLLFR-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 255 ~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
..+.|.+++ +.|+++.+++.+.....+..+++.++.++ ++||++||+.+..+
T Consensus 236 ~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~--l~dr~g~~~~~~~~ 288 (393)
T PRK15011 236 IINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGY--FAKRLGKRFLMRVA 288 (393)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhChHHHHHHH
Confidence 667888885 46999999888888777888889999999 99999999877654
No 77
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.89 E-value=1.9e-21 Score=167.70 Aligned_cols=248 Identities=8% Similarity=0.015 Sum_probs=173.8
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHH-HHHHHH-HHhhhhhhHHHHHHHHHHHhhc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGA-AFLAGS-ALGGAAVNVYMLIFGRLLLGVG 97 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~-~~~~~~-~~~~~~~~~~~l~~~r~l~G~~ 97 (310)
|.+.+|+|.|..+++++.+++.+...++++++|+++||+|||........ ...+.. ..+..+++++.+++.|.++|.+
T Consensus 28 ~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~l~~~~ 107 (382)
T TIGR00902 28 PAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSAGAHNAWLLFIAIGLFALF 107 (382)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 45567889999999999999999999999999999999998543322211 111122 2344678999999999999998
Q ss_pred ccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCc
Q 021634 98 VGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETP 177 (310)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~ 177 (310)
.+...+...++..|+ +++|+++.+....+.++|.+++|++++.+.+. +|||..|++.++..++..+ .+.++|++
T Consensus 108 ~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~---~g~~~~f~~~~~~~~~~~~-~~~~~~~~ 181 (382)
T TIGR00902 108 FSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGM---FDEQNILAILTAGLAFMLI-GFLIKPTI 181 (382)
T ss_pred HccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHH---cChhHHHHHHHHHHHHHHH-HHHcCCCC
Confidence 888888888877654 47789999999999999999999998877654 5799998886655333332 33344432
Q ss_pred hhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHh
Q 021634 178 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 257 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (310)
+.. +++ .++ +.+...+.++.+++ +.++...+..+...........+
T Consensus 182 ~~~--~~~-~~~---------------------------~~~~~~~~~~~l~~----~~~~~~l~~~~l~~~~~~~~~~~ 227 (382)
T TIGR00902 182 PPK--DAI-PED---------------------------ESQGDSAFIALLKN----PMNLRFLAAVCLIQGAHAAYYGF 227 (382)
T ss_pred CCC--ccc-ccc---------------------------ccccchhHHHHHcC----hHHHHHHHHHHHHHHHHHHHHHH
Confidence 100 000 000 00001122344433 22333333333333455667778
Q ss_pred HHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 258 APLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 258 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
.|.++++.|.++.+.+.+.....++.+++....+. +.||+|+|+++.++.
T Consensus 228 ~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~--l~~r~g~~~~l~~~~ 277 (382)
T TIGR00902 228 SAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNK--LFQNCSARDLLLISA 277 (382)
T ss_pred HHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHH--HHhhCCHHHHHHHHH
Confidence 89899889999999999999989999999999998 999999999887654
No 78
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.89 E-value=4.1e-21 Score=170.28 Aligned_cols=248 Identities=15% Similarity=0.134 Sum_probs=174.1
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhh-----CchhH-HHHHHHHHHHHHHHhhhh---hhHHHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF-----GRKPS-VLMGGAAFLAGSALGGAA---VNVYMLIFG 90 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----Grr~~-~~~~~~~~~~~~~~~~~~---~~~~~l~~~ 90 (310)
|...++.|.|.++++.+ +.....+ ++++++|+++||+ |||+. +..+.+...++....++. ++++.+.+.
T Consensus 36 ~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~ 113 (491)
T PRK11010 36 QAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAAL 113 (491)
T ss_pred HHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHH
Confidence 33455668899999887 3333333 6899999999999 99885 557777777776666664 468888889
Q ss_pred HHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh
Q 021634 91 RLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA 170 (310)
Q Consensus 91 r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~ 170 (310)
+++.|++.+...+...++..|++|+++|+++.++...+..+|.++++.++..+.+. ..|||..|++.++..++..+..
T Consensus 114 ~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~--~~GWr~~f~i~a~l~ll~~l~~ 191 (491)
T PRK11010 114 AVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADR--YLGWQGMYWLMAALLIPCIIAT 191 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999988899999999999999999999999999999999999887776641 2479999999888877776666
Q ss_pred hcccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhh
Q 021634 171 LFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTG 250 (310)
Q Consensus 171 ~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (310)
+++||+++.. +++ ++.+ ++...++++.++++..+....... .....
T Consensus 192 ~~~~e~~~~~--~~~--~~~~--------------------------~~~~~~l~~~~~~~~~~~~ll~~~----l~~~~ 237 (491)
T PRK11010 192 LLAPEPTDTI--PVP--KTLE--------------------------QAVVAPLRDFFGRNNAWLILLLIV----LYKLG 237 (491)
T ss_pred HhcCCCcccc--ccc--cchh--------------------------hhHHHHHHHHHcCcCHHHHHHHHH----HHHHH
Confidence 6678764321 000 0000 000112344444332222222111 11122
Q ss_pred HHHHHHhHHHHH-HHcCCCchhHHHHHH-HHHhhhhhhhhHHHHHHHHHHhccchhhhh
Q 021634 251 INVIAFYAPLLF-RTIGLGRLKVCQLSK-WIECGGSIGFGRNMWVKWMNRVRWRKLDIY 307 (310)
Q Consensus 251 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~-~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~ 307 (310)
......+.+.++ ++.|++..+.+.... ...++.++|.+++++ ++||+|+|+.+.+
T Consensus 238 ~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~--L~dr~g~~~~l~i 294 (491)
T PRK11010 238 DAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGI--LMQRLSLFRALMI 294 (491)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhHHHHHHH
Confidence 233344556665 567999999999874 556799999999999 9999998886654
No 79
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.88 E-value=1.9e-21 Score=189.71 Aligned_cols=256 Identities=13% Similarity=-0.054 Sum_probs=175.0
Q ss_pred cccccccc--hhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHh---hhhhhHHHHHHHHHHHhh
Q 021634 22 ISNYCKFD--SQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALG---GAAVNVYMLIFGRLLLGV 96 (310)
Q Consensus 22 i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~r~l~G~ 96 (310)
+..+++.+ ....+++.+++.+++.++++++|+++||+|||++++.+.++.+++.++. ..+++++.++++|++.|+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 115 (1146)
T PRK08633 36 LIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGA 115 (1146)
T ss_pred HHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 33344444 3457999999999999999999999999999999999887766655543 345789999999999999
Q ss_pred cccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccC------CCchhHHHHHhhHHH-HHHHHHH
Q 021634 97 GVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIK------GGWGWRVSLALAAVP-ASILTLG 169 (310)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~wr~~~~~~~~~-~~~~~~~ 169 (310)
+.+...+...+++.|++|+++|++++++...+..+|.++++.+++++.... +..+|++.+.+..+. .++.++.
T Consensus 116 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (1146)
T PRK08633 116 QSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIF 195 (1146)
T ss_pred HHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998776530 011344444333333 3333344
Q ss_pred hhcccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhh
Q 021634 170 ALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVT 249 (310)
Q Consensus 170 ~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (310)
.+.+||+++....+.. ++. .. ... .....++..++++..+. ..+..+....
T Consensus 196 ~~~~~~~~~~~~~~~~--~~~---------~~----~~~----------~~~~~~~~l~~~~~~~~----~~~~~~~~~~ 246 (1146)
T PRK08633 196 AYRLPKVPAAAPEVFD--KKK---------YL----FPK----------LLWRNLKLLRSDRVLWL----AIIGLSYFWF 246 (1146)
T ss_pred HhcCcCCCCCCccccc--ccc---------cc----cHH----------HHHHHHHHHhcCcHHHH----HHHHHHHHHH
Confidence 4557877643211100 000 00 000 00112233333322222 2222222222
Q ss_pred hHHHHHHhHHHHHH-HcCCCch-hHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 250 GINVIAFYAPLLFR-TIGLGRL-KVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 250 ~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
.......+.|.+++ ..|++.. ..+++.+...++.+++.++.++ +.||+++++.+.++
T Consensus 247 ~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~--l~~r~~~~~~~~~~ 305 (1146)
T PRK08633 247 ISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGR--LSGRHIELGLVPLG 305 (1146)
T ss_pred HHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHH--HhCCceEccchhHH
Confidence 33445667777775 4699988 9999999999999999999999 99999988776544
No 80
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.88 E-value=9.1e-21 Score=164.63 Aligned_cols=249 Identities=14% Similarity=0.112 Sum_probs=173.4
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhh-----Cchh-HHHHHHHHHHHHHHHhhhh---hhHHHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF-----GRKP-SVLMGGAAFLAGSALGGAA---VNVYMLIFG 90 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----Grr~-~~~~~~~~~~~~~~~~~~~---~~~~~l~~~ 90 (310)
|..-++.|+|.+++|++..+... .+.++++|+++||+ |||| .+..+.++.+++....++. .+++.+.+.
T Consensus 23 ~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~ 100 (402)
T PRK11902 23 QAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGL 100 (402)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHH
Confidence 33344569999999999777665 68999999999999 8775 6777788887777776665 457777778
Q ss_pred HHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh
Q 021634 91 RLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA 170 (310)
Q Consensus 91 r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~ 170 (310)
.++.+.+.+...+...+++.|++|+++|+++.++...+..+|..+++.++..+.+. ..+||..|++.++..++..+..
T Consensus 101 ~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~--~~gw~~~f~i~a~~~l~~~l~~ 178 (402)
T PRK11902 101 AVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADR--VLGWGNTYLLMAGLMLAGALTT 178 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhc--ccCHHHHHHHHHHHHHHHHHHH
Confidence 88888888888889999999999999999999999999999999998887766542 1379999999888777666655
Q ss_pred hcccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhh
Q 021634 171 LFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTG 250 (310)
Q Consensus 171 ~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (310)
++.||+++... + .++.+ ++ ...++++.++++..+..+....+......
T Consensus 179 ~~~~e~~~~~~---~-~~~~~----------------~~----------~~~~~~~l~~~~~~~~~l~~~~l~~~~~~-- 226 (402)
T PRK11902 179 LWAPEPEVPAR---P-PRSLG----------------EA----------VVGPLRDFFSRRGAWALLLLIVLYKLGDA-- 226 (402)
T ss_pred HhcCCCccccc---c-cchhH----------------HH----------HHHHHHHHHhCcCHHHHHHHHHHHHhHHH--
Confidence 66777643210 0 00000 00 01123444545443333332222222111
Q ss_pred HHHHHHhHHHHHHHcCCCchhHHHHHHHHH-hhhhhhhhHHHHHHHHHHhccchhhhh
Q 021634 251 INVIAFYAPLLFRTIGLGRLKVCQLSKWIE-CGGSIGFGRNMWVKWMNRVRWRKLDIY 307 (310)
Q Consensus 251 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~g~~~~~~~~l~d~~g~r~~~~~ 307 (310)
.......+.+.++.|+++++.+......+ ++.+++.+++++ +.||+++|+.+..
T Consensus 227 -~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~--l~~r~g~~~~l~~ 281 (402)
T PRK11902 227 -FAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGT--LMVRLGLYRSLML 281 (402)
T ss_pred -HHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHH--HHHHHhHHHHHHH
Confidence 11122334444667999999998876654 468899999999 9999998887654
No 81
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.88 E-value=4.1e-21 Score=165.66 Aligned_cols=245 Identities=9% Similarity=0.016 Sum_probs=170.6
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCch----hHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhh
Q 021634 21 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRK----PSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGV 96 (310)
Q Consensus 21 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 96 (310)
...+|+|.|..++|++.+++.++..++++++|+++||+||| +.+.++..+. .......+++++.+++.|++.|+
T Consensus 29 ~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~l~g~ 106 (382)
T PRK11128 29 VWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAIGLFNL 106 (382)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHHHHHHH
Confidence 44577899999999999999999999999999999999994 3333222221 22233446889999999999999
Q ss_pred cccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCC
Q 021634 97 GVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPET 176 (310)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es 176 (310)
+.+...+...++..++ .++|+++.+......++|..++|++++.+.+. +|||..|++.++..++..+..++.||.
T Consensus 107 ~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~---~g~~~~f~~~~~~~~~~~~~~~~~~~~ 181 (382)
T PRK11128 107 FFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSW---FGEQAILWILTAGVASMLLGQLLRPTI 181 (382)
T ss_pred HHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHH---cChhHHHHHHHHHHHHHHHHHHccCCC
Confidence 9888888877777776 45688888888888999999999999887653 479999988776555444444445543
Q ss_pred chhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHH
Q 021634 177 PNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAF 256 (310)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (310)
++. ++ .++ ++++...++++.++++.... ..+..+...........
T Consensus 182 ~~~----~~-~~~--------------------------~~~~~~~~~~~i~~~~~~~~----~~~~~~l~~~~~~~~~~ 226 (382)
T PRK11128 182 MPQ----GE-SRQ--------------------------QESAGWPAWKALLKEPTVWR----FLLCVSLLQGSHAAYYG 226 (382)
T ss_pred CCc----cc-ccc--------------------------ccccccchHHHHHcChhHHH----HHHHHHHHHHHhHhHHH
Confidence 210 00 000 00001123445554432222 22222222223344566
Q ss_pred hHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 257 YAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 257 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
+.|.+.++.|.++.+.+.+.....+..++..+..++ +.||+++|+.+..++
T Consensus 227 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~--l~~r~~~~~~l~~~~ 277 (382)
T PRK11128 227 FSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNR--LFRRWSARDLLLLSA 277 (382)
T ss_pred HHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHH
Confidence 778888888999999999999888888888899999 999999999876553
No 82
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.88 E-value=1.2e-21 Score=159.35 Aligned_cols=153 Identities=20% Similarity=0.208 Sum_probs=126.0
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccc
Q 021634 25 YCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQS 104 (310)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 104 (310)
+.+.+..-.|.+.+.+.+++.+.++.+|.++||+|||+++++|.+..++...+.+.++|+..++++|++.|+.-| ...+
T Consensus 62 ~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v 140 (451)
T KOG2615|consen 62 PDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSV 140 (451)
T ss_pred cccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHH
Confidence 334566778999999999999999999999999999999999999999999999999999777788999999865 5677
Q ss_pred hhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccC---CCchhHHHHHhhHHHHHH-HHHHhhcccCCch
Q 021634 105 VPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIK---GGWGWRVSLALAAVPASI-LTLGALFLPETPN 178 (310)
Q Consensus 105 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~wr~~~~~~~~~~~~-~~~~~~~~~es~~ 178 (310)
..++++|..++|+|+++++.+...+++|.++||.+++++.+.. +.+.+-.+.++..+.... .....+++||+-+
T Consensus 141 ~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~ 218 (451)
T KOG2615|consen 141 IRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLP 218 (451)
T ss_pred HHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 8899999999999999999999999999999999999998722 222232323334444433 4455677999843
No 83
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.87 E-value=1.8e-20 Score=162.47 Aligned_cols=252 Identities=12% Similarity=-0.005 Sum_probs=162.8
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHh---hhh-----hhHHHHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALG---GAA-----VNVYMLIFGR 91 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~---~~~-----~~~~~l~~~r 91 (310)
.++.+++|.++.+.+++.++..++..+++++.|+++||+|||+.++.+.....++.... .+. +......+.+
T Consensus 27 ~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (396)
T TIGR00882 27 IWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGG 106 (396)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 45667789999999999999999999999999999999999999988766665543322 111 1233455678
Q ss_pred HHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhh
Q 021634 92 LLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL 171 (310)
Q Consensus 92 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~ 171 (310)
++.|++.+...+....+..|..+ +++...+......++|..+++.+++.+.+ .+||..|++.++..++..+..+
T Consensus 107 ~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~----~~~~~~f~~~~~~~~~~~~~~~ 180 (396)
T TIGR00882 107 LYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFS----IDPQIVFWLGSGFALILMLLLM 180 (396)
T ss_pred HHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhc----cCchHHHHHHHHHHHHHHHHHH
Confidence 88888888777777777666432 34456677777778899999998876653 4799999998887777665554
Q ss_pred c-ccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhh
Q 021634 172 F-LPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTG 250 (310)
Q Consensus 172 ~-~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (310)
+ .||+|++. +.++. .+ .++++.+..+.++.++++..... .+..+.....
T Consensus 181 ~~~~~~~~~~--------~~~~~----~~--------------~~~~~~~~~~~~~~l~~~~~~~~----~l~~~~~~~~ 230 (396)
T TIGR00882 181 FAKPKAPSSA--------TVANA----LG--------------ANASAFSLKLALELFRQRKFWMF----VLYVVGVACV 230 (396)
T ss_pred HhCCCCchhh--------hhhcc----cc--------------cccCCCCHHHHHHHHcCCcHHHH----HHHHHHHHHH
Confidence 4 34433210 00000 00 00000111233444444322221 1122222223
Q ss_pred HHHHHHhHHHHHHHc----CCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 251 INVIAFYAPLLFRTI----GLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 251 ~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
+.....+.+.++++. +.+....+...+...+...++....++ +.||+|+|+.++++.
T Consensus 231 ~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~--l~~r~g~~~~l~~~~ 291 (396)
T TIGR00882 231 YDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPL--IINRIGAKNALLIAG 291 (396)
T ss_pred HHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHH--HHHHhccchhHHHHH
Confidence 334444566666543 445566788888888888888899998 999999999877653
No 84
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.87 E-value=9.7e-21 Score=184.45 Aligned_cols=248 Identities=14% Similarity=0.007 Sum_probs=174.6
Q ss_pred cccccccch-hHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHH---HHHHHHHHHHHhhhhhhHHHHHHHHHHHhhc
Q 021634 22 ISNYCKFDS-QLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLM---GGAAFLAGSALGGAAVNVYMLIFGRLLLGVG 97 (310)
Q Consensus 22 i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 97 (310)
+..+.+.+. ...++..+++.+.+.+.++++|+++||+|||+++.. +.+......+.....++++.++++|+++|++
T Consensus 42 ~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~ 121 (1140)
T PRK06814 42 LSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIH 121 (1140)
T ss_pred hccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 444444433 446888889999999999999999999999997533 2222233333333458999999999999999
Q ss_pred ccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCc
Q 021634 98 VGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETP 177 (310)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~ 177 (310)
.+...+...+++.|++|+++|++++++.+++..+|.+++|.+++++... .+|++.|+..++..++.+++.+++|+++
T Consensus 122 ~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (1140)
T PRK06814 122 SALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATIS---GNFVILVALLMGIAVLGWLASLFIPKTG 198 (1140)
T ss_pred HHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 9999999999999999999999999999999999999999999988764 4699998666666666666666677654
Q ss_pred hhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHh
Q 021634 178 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 257 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (310)
+....... +.. ..++. ...++...+++ .++...+..+........+..+
T Consensus 199 ~~~~~~~~--~~~---------------~~~~~----------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 247 (1140)
T PRK06814 199 NAAPDLKI--DRN---------------IIRST----------ITLLKYAKADK----RIWLAILGISWFWLVGAVVLSQ 247 (1140)
T ss_pred CCCCCCee--ccc---------------hHHHH----------HHHHHHHhcCc----hHHHHHHHHHHHHHHHHHHHHH
Confidence 21100000 000 00000 01223333332 2333333333333334556678
Q ss_pred HHHHHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhh
Q 021634 258 APLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLD 305 (310)
Q Consensus 258 ~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~ 305 (310)
.|.|+++ .|.++...+.+.+...++.++|.+..++ +.++..+++.+
T Consensus 248 ~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~--l~~~~~~~~~~ 294 (1140)
T PRK06814 248 LPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASK--LSEGRITLLYV 294 (1140)
T ss_pred hHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHH--HhCCceeeeee
Confidence 8999865 5999999999999999999999999999 88877666543
No 85
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.86 E-value=1.6e-20 Score=164.99 Aligned_cols=253 Identities=12% Similarity=0.125 Sum_probs=170.8
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhh----hCchh-HHHHHHHHHHHHHHHhhhhhh------HHHH
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRA----FGRKP-SVLMGGAAFLAGSALGGAAVN------VYML 87 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr~-~~~~~~~~~~~~~~~~~~~~~------~~~l 87 (310)
.+.+.+++|+++.+.+++.++..+..++..++.|+++|| +|||| .++.+.....++.+++...++ .+.+
T Consensus 23 ~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 102 (437)
T TIGR00792 23 LFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYA 102 (437)
T ss_pred HHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHH
Confidence 356778899999999999999999999999999999998 68744 566787888877777766543 3456
Q ss_pred HHHHHHHhhcccccccchhhhhhhcc-cccchhhhhhHHHHHHHHHHHHHHHHHhhhccc----CCCchhHHHHHhhHHH
Q 021634 88 IFGRLLLGVGVGFANQSVPLYLSEMA-PARYRGAINNGFQFSIGIGALAANFINYGTEQI----KGGWGWRVSLALAAVP 162 (310)
Q Consensus 88 ~~~r~l~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~wr~~~~~~~~~ 162 (310)
.+.+++.+++.+.......++..|.. ++++|++..++.+.+..+|..+++.+...+... .+..+||+.+.+.+++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l 182 (437)
T TIGR00792 103 YITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALI 182 (437)
T ss_pred HHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHH
Confidence 66788888888877777788888887 468899999998888888877666554333221 2345899999988888
Q ss_pred HHHHHHHh-hcccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHH
Q 021634 163 ASILTLGA-LFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMA 241 (310)
Q Consensus 163 ~~~~~~~~-~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
.++..+.. ++.||+++.. + .++ +++.+..+.+++.+++ +.++...
T Consensus 183 ~~~~~~~~~~~~~e~~~~~----~-~~~-------------------------~~~~~~~~~~~~l~~~----~~~~~~~ 228 (437)
T TIGR00792 183 GVVSLIICFFGTKERYSEI----P-KNI-------------------------EKKLSLKQIFKALFKN----DQLLILC 228 (437)
T ss_pred HHHHHHHHHcCCEecCCCC----C-ccc-------------------------ccCCCHHHHHHHHhCC----HHHHHHH
Confidence 77665554 4467654210 0 000 0000001122333333 2233333
Q ss_pred HHHHHHhhhHHHHHHhHHHHHHHc-CCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 242 IPFFQQVTGINVIAFYAPLLFRTI-GLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
+..+......+....+.+++.+.. + ++...+.+.....++.+++.++.++ +.||+|+|+.+..+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~--l~~r~g~~~~~~~~ 293 (437)
T TIGR00792 229 LAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPR--LVKKFGRKILFAGG 293 (437)
T ss_pred HHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHH--HHHHhCcHHHHHHH
Confidence 333333333444444555555443 4 4566677777778889999999999 99999999987765
No 86
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.85 E-value=2.1e-19 Score=145.88 Aligned_cols=240 Identities=18% Similarity=0.163 Sum_probs=197.1
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
+++++|+|+|.+..|.++++..+...+.+++..+++.|+|.++.+..++++..++.++-... +.+.++.+-.+.|.+.+
T Consensus 36 ~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~gIa 114 (395)
T COG2807 36 DEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGAGIA 114 (395)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHhhHH
Confidence 67899999999999999999999999999999999999999999999999999999998877 77888899999999999
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCchh
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNS 179 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~ 179 (310)
..+...+.++.+.|| |+-+..+++|....++|..+++.++..+.+.. .+||....+.+.++++.++.++.-...++
T Consensus 115 v~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~--~gW~~aL~~WAl~allAl~~WlPq~~r~~- 190 (395)
T COG2807 115 VINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHS--GGWRGALGFWALLALLALLIWLPQALREQ- 190 (395)
T ss_pred HHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhh--ccHHHHHHHHHHHHHHHHHHHhhhccccc-
Confidence 999999999999997 56889999999999999999888877676654 47999999999999888877653211110
Q ss_pred hHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhHH
Q 021634 180 LIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAP 259 (310)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (310)
... .+....+..+++ +++..+...+.+..+...++....|+|
T Consensus 191 ~~~----------------------------------~~~~~~~~~~vw----~~~~aW~vtLfmGlqS~~~Y~~~~WLP 232 (395)
T COG2807 191 AAS----------------------------------IATKLVSVRKVW----RSPLAWQVTLFMGLQSLLYYIVIGWLP 232 (395)
T ss_pred ccc----------------------------------cccccccccccc----cCchhHHHHHHHHhhHHHHHHHHHHHH
Confidence 000 000011112233 344455566666677778899999999
Q ss_pred HHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchh
Q 021634 260 LLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKL 304 (310)
Q Consensus 260 ~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~ 304 (310)
.++.+.|+|..+++.+.++..+..++..+.... +.+|...++.
T Consensus 233 ~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~--la~R~~n~r~ 275 (395)
T COG2807 233 AILIDRGLSAAEAGSLLSLMQLAQLPTALLIPL--LARRSKNQRP 275 (395)
T ss_pred HHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHH--HHHHhcccch
Confidence 999999999999999999999999999999999 8887654433
No 87
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.85 E-value=5e-21 Score=168.18 Aligned_cols=277 Identities=17% Similarity=0.206 Sum_probs=202.3
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHH-HHHHhhcc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFG-RLLLGVGV 98 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-r~l~G~~~ 98 (310)
++++++++.+.++++|+.++......+.+++.+.+.||||.|.+.+.|.++..++.++.++++++|++++. -++.|+|.
T Consensus 70 ~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~ 149 (509)
T KOG2504|consen 70 EELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGL 149 (509)
T ss_pred HHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccc
Confidence 66788999999999999999999999999999999999999999999999999999999999999998876 79999999
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccC-Cc
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPE-TP 177 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~e-s~ 177 (310)
|..+......+..+| +++|+.+.|+...+.++|.++-|.+...+.+ ..|||+.+++.+.+.+-.++....+++ ++
T Consensus 150 ~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~---~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~ 225 (509)
T KOG2504|consen 150 GLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLS---KYGWRGALLIFGGISLNVLVAGALLRPLSP 225 (509)
T ss_pred hhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHH---HhCcHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 999999999999887 5789999999999999999988888555543 468999999988887766666555433 22
Q ss_pred hhhHhccCcHHHHHHHHH-------HhcCC-cchHH-----HHHHHHHhhhccccccchhhhhc----cccchhHHHHHH
Q 021634 178 NSLIQRKSDHQKAKLMLQ-------RVRGT-NDVEA-----EFDDLLKASSTAKTINHPFKKII----QRKYRPQLLMAM 240 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 240 (310)
+....+.++.++..+..+ +.... +.... ..++.++..++.. ..+.+..+ .+..+.+.++.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~ll~~~~fl~~ 303 (509)
T KOG2504|consen 226 PKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWR--NSPLQAFLSMLDLSLLKDPKFLLL 303 (509)
T ss_pred CCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCcccc--ccchhhhhhhhhHHHHcCchHHHH
Confidence 211110000000000000 00000 00000 0001111111111 00111111 133445777777
Q ss_pred HHHHHHHhhhHHHHHHhHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchh
Q 021634 241 AIPFFQQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKL 304 (310)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~ 304 (310)
.+.......++.....++|.+.++.|++..+++.+.++.++..++|+++.|+ +.|+...++.
T Consensus 304 ~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~--laD~~~~~~~ 365 (509)
T KOG2504|consen 304 ALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGL--LADKPGIRAL 365 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhh--hcCccccchH
Confidence 7887788888899999999999999999999999999999999999999999 9999874433
No 88
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.85 E-value=1.7e-19 Score=157.66 Aligned_cols=251 Identities=13% Similarity=0.029 Sum_probs=149.3
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhh---hhh-----hHHHHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGG---AAV-----NVYMLIFGR 91 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~---~~~-----~~~~l~~~r 91 (310)
.++++++|+++.+.+++.+++.++..++++++|+++||+|||++++++..+..++..... .++ ......+++
T Consensus 35 ~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (420)
T PRK09528 35 IWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGG 114 (420)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677999999999999999999999999999999999999999887666554433211 111 111122233
Q ss_pred HHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhh
Q 021634 92 LLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL 171 (310)
Q Consensus 92 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~ 171 (310)
++.|.+.....+....+..+ . .++++...+.......+|..+++.+++.+.. .+|++.|++.++..++..+..+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~----~~~~~~f~~~~~~~~~~~~~~~ 188 (420)
T PRK09528 115 IYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFN----INPQINFWLGSGSALILLVLLF 188 (420)
T ss_pred HHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHh----cCchHhHHHHHHHHHHHHHHHh
Confidence 44443333333333332222 2 2456777788888888999999999887754 3699999988877776666655
Q ss_pred ccc-CCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhh
Q 021634 172 FLP-ETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTG 250 (310)
Q Consensus 172 ~~~-es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (310)
+.+ |+++....+++ ++ + ++++......++.++++..+...+ ..+.....
T Consensus 189 ~~~~~~~~~~~~~~~--~~----------~--------------~~~~~~~~~~~~~l~~~~~~~l~l----~~~~~~~~ 238 (420)
T PRK09528 189 FAKPDAPSTAKVANA--LG----------A--------------NASAVSLKDALALLKLPKFWFLVL----YVIGVACF 238 (420)
T ss_pred cccccccchhhhccc--hh----------c--------------ccccccHHHHHHHccCCCeEeehH----HHHHHHHH
Confidence 543 33221100000 00 0 000000011222333322111111 11111112
Q ss_pred HHHHHHhHHHHHHH----cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 251 INVIAFYAPLLFRT----IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 251 ~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
+.....+.|.++.+ .+.+..+.+...++..+...++.+..++ +.||+|+|+.+..+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~--l~dr~g~~~~~~~~ 298 (420)
T PRK09528 239 YDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPF--IINRIGAKNALLLA 298 (420)
T ss_pred HHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHH--HHHHhCcchhhHHH
Confidence 22333345555533 3556677788888888888999999999 99999999987653
No 89
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.85 E-value=4e-19 Score=146.29 Aligned_cols=249 Identities=14% Similarity=0.145 Sum_probs=196.1
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhh---hhhhHHHHHHHHHHHhh
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGG---AAVNVYMLIFGRLLLGV 96 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~ 96 (310)
|.+++.|+++..|.+++...++.++.+.+++.|++.+|+|+|+.+++|..+..+++.+.. ...++..++++-++.|.
T Consensus 37 p~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~ 116 (422)
T COG0738 37 PHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILAS 116 (422)
T ss_pred HHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHh
Confidence 888999999999999999999999999999999999999999999999999999999874 55788899999999999
Q ss_pred cccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccC----------------CCchhHHHHHhhH
Q 021634 97 GVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIK----------------GGWGWRVSLALAA 160 (310)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----------------~~~~wr~~~~~~~ 160 (310)
|.+...+....++....++++....+.+.+.++++|..++|+++..+.... ....|+.+|...+
T Consensus 117 Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~ 196 (422)
T COG0738 117 GIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILA 196 (422)
T ss_pred hhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHH
Confidence 999999999999999999988888999999999999999999988665420 0114777887766
Q ss_pred HHHHHHHHHhhc--ccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHH
Q 021634 161 VPASILTLGALF--LPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLM 238 (310)
Q Consensus 161 ~~~~~~~~~~~~--~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (310)
...++..+.... .||.+....++.+ ..+....+.+++ +.+.
T Consensus 197 ~~lvll~v~~~~~k~p~~~~~~~~~~~---------------------------------~~~~~~~~l~~~----~~~~ 239 (422)
T COG0738 197 GLLVLLAVLILLSKLPDLQVAAPSLGA---------------------------------SGSAGLSSLFQN----KHLR 239 (422)
T ss_pred HHHHHHHHHHHhccCCcCCcccccccc---------------------------------cccchHHHHHhC----hHHH
Confidence 666655555444 3433211000000 000022334433 3344
Q ss_pred HHHHHHHHHhhhHHHHHHhHHHHHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhh
Q 021634 239 AMAIPFFQQVTGINVIAFYAPLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 307 (310)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~ 307 (310)
...+..++..........|++.|+.+ .|.+..++....+....+.++|++++.+ ++.|+...|.+.+
T Consensus 240 ~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~--lm~~~~~~k~Laf 307 (422)
T COG0738 240 LGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSA--LMSRIKPEKYLAF 307 (422)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhCHHHHHHH
Confidence 44555555566667788899999988 5999999999999999999999999999 9999988877653
No 90
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.83 E-value=6.4e-21 Score=155.97 Aligned_cols=235 Identities=14% Similarity=0.067 Sum_probs=183.8
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccc
Q 021634 23 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFAN 102 (310)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 102 (310)
.++.+-++.++|++.....+.+.+.+++.|.+.||+|+|-.+++|.+.....++++++.++++.++++|.++|+|.++..
T Consensus 98 ~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~ 177 (464)
T KOG3764|consen 98 AISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFAD 177 (464)
T ss_pred ccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHH
Confidence 45666778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhhcccccc-hhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCchhhH
Q 021634 103 QSVPLYLSEMAPARY-RGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNSLI 181 (310)
Q Consensus 103 ~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~ 181 (310)
+...++++|.+|+++ |++++|..-.+.++|.+++|+.++++.+.. |.+..|++.+++.++-..+.+++-|..+..
T Consensus 178 tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~---Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~- 253 (464)
T KOG3764|consen 178 TSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA---GKSAPFLVLAIVLLLDGALQLLVIEPTEMD- 253 (464)
T ss_pred hhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc---CCcCcHHHHHHHHHHHHHHHHheeCccccC-
Confidence 999999999999864 799999999999999999999999998764 589999999999988777776643321100
Q ss_pred hccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhHHHH
Q 021634 182 QRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLL 261 (310)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (310)
+ ++..+..++.++++. +.++...................++..
T Consensus 254 --~-------------------------------~~~~~~~~~~~Ll~d----P~I~~~agai~~~n~~lafLePtlslw 296 (464)
T KOG3764|consen 254 --P-------------------------------DSTEQGTPMWSLLMD----PYILLIAGAITFSNSSLAFLEPTLSLW 296 (464)
T ss_pred --c-------------------------------cccccCccHHHHHhC----chHhhhhcchhhccchHHHhCcccHHH
Confidence 0 011112233444433 223323333223333334445555565
Q ss_pred H-HHcCCCch-hHHHHHHHHHhhhhhhhhHHHHHHHHHHhcc
Q 021634 262 F-RTIGLGRL-KVCQLSKWIECGGSIGFGRNMWVKWMNRVRW 301 (310)
Q Consensus 262 ~-~~~g~~~~-~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~ 301 (310)
. ++.. ++. +.+..+...++...++..+.+. +.||++.
T Consensus 297 m~e~m~-~p~w~~G~~fLp~~~~y~ig~~lfg~--la~k~~~ 335 (464)
T KOG3764|consen 297 MLETMF-TPGWEVGLAFLPASLSYAIGTNLFGK--LADKYPH 335 (464)
T ss_pred HHHhcc-CCCcceeeeecccccchhccCchHHH--HHHhcCc
Confidence 5 4555 444 8888888999999999999999 9999984
No 91
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.83 E-value=2.8e-19 Score=155.73 Aligned_cols=245 Identities=11% Similarity=0.009 Sum_probs=158.8
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCc-hhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGR-KPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 98 (310)
+.+++++|++.+++|++.+++.++..++++++|.++||+|| |+++.++.++..++..+..+.++++.+.+.|++.|++.
T Consensus 27 ~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 106 (418)
T TIGR00889 27 SYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAY 106 (418)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 56777899999999999999999999999999999999965 77888888888888888888899999999999999977
Q ss_pred cccccchhhhhh--------hcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh
Q 021634 99 GFANQSVPLYLS--------EMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA 170 (310)
Q Consensus 99 ~~~~~~~~~~~~--------~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~ 170 (310)
+...+...++.. |......|.+..+ .+|..+++.+++.+.. ...|+ .|++.++..++..+..
T Consensus 107 ~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~---~~~~~-~f~~~~~~~~~~~~~~ 176 (418)
T TIGR00889 107 MPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDI---ELSNI-QLYITAGSSALLGVFA 176 (418)
T ss_pred ccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcc---cchhH-HHHHHHHHHHHHHHHH
Confidence 666555544321 2222234445444 3566666666665522 12354 3555555555555555
Q ss_pred hcccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhh
Q 021634 171 LFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTG 250 (310)
Q Consensus 171 ~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (310)
+++||+|+...+++. +.++ ..+.+.++.+|++.....+ +..+.....
T Consensus 177 ~~~~e~~~~~~~~~~---~~~~--------------------------~~~~~~~~~~k~~~~~~~~----~~~~~~~~~ 223 (418)
T TIGR00889 177 LTLPDIPVAKSTAKM---SIKV--------------------------MLGLDAFILFKNKRMAIFF----FFSMLLGAP 223 (418)
T ss_pred hcCCCCCCCcccccc---CHHH--------------------------HhhhhHHHHhcCCCeeeHH----HHHHHHHhH
Confidence 678887531110000 0000 0000112233332211112 222222222
Q ss_pred HHHHHHhHHHHHHHcCCCc--------hhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 251 INVIAFYAPLLFRTIGLGR--------LKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 251 ~~~~~~~~~~~~~~~g~~~--------~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
......+.+.++++.|.++ +..+...+...+..+++.+..++ +.||+|+|++++.++
T Consensus 224 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~--l~dr~g~r~~l~~~~ 288 (418)
T TIGR00889 224 LQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPF--FLKRFGIKKVMLLSL 288 (418)
T ss_pred HHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH--HHHHhCcHHHHHHHH
Confidence 2344566677787776554 55688888888899999999999 999999999987654
No 92
>PTZ00207 hypothetical protein; Provisional
Probab=99.82 E-value=4.3e-19 Score=157.42 Aligned_cols=146 Identities=14% Similarity=0.078 Sum_probs=122.3
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh------hhHHHHHHHHH
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA------VNVYMLIFGRL 92 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~r~ 92 (310)
.+.+++++|+|..+.+++.++. ......+++.|+++||+|||+++.++.+++.++.++++++ .+++.+.+.|+
T Consensus 50 s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~ 128 (591)
T PTZ00207 50 SGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNG 128 (591)
T ss_pred HHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHH
Confidence 3668899999999999998874 4455678889999999999999999999999999999987 68999999999
Q ss_pred HHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHH-HHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhh
Q 021634 93 LLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALA-ANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL 171 (310)
Q Consensus 93 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~ 171 (310)
+.|++.+...+.....+.+++| ++||++.++...+.++|..+ +++...++. .+|+..+++.+++.++..+..+
T Consensus 129 l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-----~~~~~~fl~l~vl~~vv~ll~~ 202 (591)
T PTZ00207 129 LMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-----DNTSAYFFFLMSFALVVGILAI 202 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HhHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888888888999996 78999999999999999976 444444433 2588888887777776655543
No 93
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.82 E-value=3.2e-18 Score=151.36 Aligned_cols=152 Identities=16% Similarity=0.138 Sum_probs=128.6
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhh-hCchhHHHHHHHHHHHHHHHhhhhhhHHH-HHHHHHHHhhc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRA-FGRKPSVLMGGAAFLAGSALGGAAVNVYM-LIFGRLLLGVG 97 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~r~l~G~~ 97 (310)
.++++++|++.++.+++.+.+.....+..+++|+++|| +|||++++.+.+++.++.+.++++.+... ++++|.++|+|
T Consensus 39 ~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig 118 (489)
T PRK10207 39 VFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVG 118 (489)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhc
Confidence 56678899999999999999998999999999999999 99999999999999999999998876444 55789999999
Q ss_pred ccccccchhhhhhhccccc--chhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhccc
Q 021634 98 VGFANQSVPLYLSEMAPAR--YRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLP 174 (310)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~ 174 (310)
.|...+...+++.|.+|++ +|+++.++++.+.++|..++|.+++++.+. .|||+.|++.++..++..+...+.+
T Consensus 119 ~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~---~gw~~~F~i~~i~~~~~~~~~~~~~ 194 (489)
T PRK10207 119 NGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADK---FGYSVTYNLCGAGLIIALLVYFACR 194 (489)
T ss_pred cccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHh---hChHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999999999887 457789999999999999999999888764 4799999886554333333333333
No 94
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.81 E-value=1.7e-17 Score=146.64 Aligned_cols=149 Identities=17% Similarity=0.213 Sum_probs=130.2
Q ss_pred ccccc--cccchhHHHHHHHHHHHHHHHHHhhhHHHHhh-hCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhc
Q 021634 21 KISNY--CKFDSQLLTSFTSSLYVAGLVASFVASSVTRA-FGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVG 97 (310)
Q Consensus 21 ~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 97 (310)
+++++ +|++..+.+++.+.+.++..++++++|+++|| +|||+++.++.++.+++.++.+++++++.+.++|.+.|++
T Consensus 36 yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g 115 (475)
T TIGR00924 36 YLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVG 115 (475)
T ss_pred HHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhc
Confidence 44555 89999999999999999999999999999999 8999999999999999999999988888899999999999
Q ss_pred ccccccchhhhhhhcccccc---hhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc
Q 021634 98 VGFANQSVPLYLSEMAPARY---RGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF 172 (310)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~---r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~ 172 (310)
.|...+....+++|++|+++ |+++.++++.+.++|..+++.+++.+.+. .+|++.|.+.++..++..+..++
T Consensus 116 ~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~---~g~~~~f~~~~~~~~~~~l~~~~ 190 (475)
T TIGR00924 116 SGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAEN---YGYHVGFNLAAVGMVIGLLTFFA 190 (475)
T ss_pred cccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHh---cChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998764 88899999999999999999998877643 47999998877655544444333
No 95
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.79 E-value=1.3e-17 Score=147.24 Aligned_cols=148 Identities=22% Similarity=0.261 Sum_probs=119.1
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
+++..|+|-+ +...|+.+...++..++.++.|+++|.||||..++.+.++..+|+++++.++|...++.+..+.|+|.|
T Consensus 68 ~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG 146 (599)
T PF06609_consen 68 PYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAG 146 (599)
T ss_pred HHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhH
Confidence 4566677654 567889999999999999999999999999999999999999999999999999999999999999977
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF 172 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~ 172 (310)
... .....++|..|.|.|....++...........++.++..+.. +.+|||.|++.++...+.++..++
T Consensus 147 ~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~---~~~WRw~~~~~~i~~~i~~vl~~~ 215 (599)
T PF06609_consen 147 VQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAA---HSGWRWIFYIFIIWSGIALVLIFF 215 (599)
T ss_pred HHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhcc---CCCcchHHHHHHHHHHHHHHHHHH
Confidence 665 445568999999999887776665555545456666544432 347999999988877766655433
No 96
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.76 E-value=1.1e-17 Score=149.00 Aligned_cols=177 Identities=18% Similarity=0.106 Sum_probs=130.2
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHH---hhhhhhHHHHHHHHHHHhhc
Q 021634 21 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSAL---GGAAVNVYMLIFGRLLLGVG 97 (310)
Q Consensus 21 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~r~l~G~~ 97 (310)
.+++++|.+..+.++..+...++..++.++.|+++||+|||+.+..+.++..++.+. ...+++...+++++++.|++
T Consensus 276 ~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 355 (490)
T PRK10642 276 YLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVI 355 (490)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 355677888888888888888999999999999999999999988877654443322 22234567777889999887
Q ss_pred ccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCc
Q 021634 98 VGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETP 177 (310)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~ 177 (310)
.+...+....++.|.+|++.|+++++.......++..++|.+.+.+.+.. .+|+..+++..+++++..+..+++||+|
T Consensus 356 ~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~--~~~~~~~~~~~~~~~i~~~~~~~~pes~ 433 (490)
T PRK10642 356 LNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVEST--QNLMMPAYYLMVVAVIGLITGVTMKETA 433 (490)
T ss_pred HHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCchHHHHHHHHHHHHHHHHHHHhcccc
Confidence 77777777888899999999999999744334444556666665554322 2477777666667777666677789999
Q ss_pred hhhHhc----cCcHHHHHHHHHHhcC
Q 021634 178 NSLIQR----KSDHQKAKLMLQRVRG 199 (310)
Q Consensus 178 ~~~~~~----~~~~~~~~~~~~~~~~ 199 (310)
+++.++ +++.||+++.++++++
T Consensus 434 ~~~~~~~~~~~~~~~~a~~~l~~~~~ 459 (490)
T PRK10642 434 NRPLKGATPAASDIQEAKEILVEHYD 459 (490)
T ss_pred CCCCCCccccccchhhHHHHhhcccc
Confidence 987654 2337888888888763
No 97
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.76 E-value=1e-16 Score=138.81 Aligned_cols=247 Identities=12% Similarity=-0.010 Sum_probs=159.7
Q ss_pred cccccccccchhHHHHHH--HHHHHHHHHHHhhh-HHHHhhhCchhHHHHHHHHHHH-HHHHhh---hhhh-HHHHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFT--SSLYVAGLVASFVA-SSVTRAFGRKPSVLMGGAAFLA-GSALGG---AAVN-VYMLIFGR 91 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-g~l~dr~Grr~~~~~~~~~~~~-~~~~~~---~~~~-~~~l~~~r 91 (310)
|...+|.|.|.+++|.+. ++..+...+.++++ ++.+||+||||..++.+.+... .....+ ...+ ...++..-
T Consensus 25 p~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (390)
T TIGR02718 25 PTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLL 104 (390)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHH
Confidence 556677899999999974 66677787888888 4579999999987665533222 122222 2222 22334444
Q ss_pred HHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhh
Q 021634 92 LLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL 171 (310)
Q Consensus 92 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~ 171 (310)
++.+++.+...+..-.+..|..++++++...+....+..+|.++++.....+.+. .+||..|++.++..++..+..+
T Consensus 105 ~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~---~gw~~~f~~~a~l~~~~~~~~~ 181 (390)
T TIGR02718 105 ACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGK---FGQRPAFLLVACVPLASLVCVL 181 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCHHHHHHHHHHHHHHHHHHHH
Confidence 5555666666666677778888888888888888888888988888776655543 4799999998888877666655
Q ss_pred cccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhH
Q 021634 172 FLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGI 251 (310)
Q Consensus 172 ~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (310)
+++|+++. +++ .++ +...+.++.+|++..+....... ......
T Consensus 182 ~~~~~~~~---~~~-~~~-----------------------------~~~~~~~~~l~~~~~~~~~~~~~----l~~~~~ 224 (390)
T TIGR02718 182 WLKDRAVA---SPE-APL-----------------------------ARRASLFRFFRRPLAWSLLALAL----LSAMTA 224 (390)
T ss_pred HcCCCCcC---ccc-cch-----------------------------hhHHHHHHHHcCcCHHHHHHHHH----HHHHHH
Confidence 55443211 000 000 00012334444433222222222 222233
Q ss_pred HHHHHhHHHHHHHcCCCchhHHHHHHHHHh-hhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 252 NVIAFYAPLLFRTIGLGRLKVCQLSKWIEC-GGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 252 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
.....+.+.++++.|+++++.+........ ...++.+++++ +.||+|+|+.+.++
T Consensus 225 ~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~--l~~r~g~~~~l~~~ 280 (390)
T TIGR02718 225 VSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAW--LVRRAGLWRTFILG 280 (390)
T ss_pred HHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHH--HHHHhhHHHHHHHH
Confidence 444556778888899999999998887764 66677889999 99999999887654
No 98
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.73 E-value=2.6e-16 Score=139.15 Aligned_cols=247 Identities=16% Similarity=0.154 Sum_probs=172.3
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHhhcc
Q 021634 24 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA-----VNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~ 98 (310)
.+..-|+...+++.....+...+.++++|.++||+.||++++.+-++..+..+..++. .+.+.+++.-++.|++.
T Consensus 38 ~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~ 117 (524)
T PF05977_consen 38 TQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGS 117 (524)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHH
Confidence 3445578889999999999999999999999999999999999888776655443332 47788899999999999
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCch
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPN 178 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~ 178 (310)
+...|...+++.|..|+++...+.++.+...++..++||.+++.+... .|-.+.|.+.++..++........++.++
T Consensus 118 a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~---~G~~~~f~inalsfl~~i~~l~~~~~~~~ 194 (524)
T PF05977_consen 118 AFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAF---FGAAAAFLINALSFLISILALLRWKPPPP 194 (524)
T ss_pred HHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHcccccc
Confidence 999999999999999999999999999999999999999999877653 24566777766555544433333332211
Q ss_pred hhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhH
Q 021634 179 SLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYA 258 (310)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (310)
.++.+.|. . .++. +..++-..+++..+..+....+. ......+...+
T Consensus 195 ---~~~~~~e~---~-------------~~~l----------~~G~ryv~~~~~l~~~l~~~~~~----~l~~~a~~aLl 241 (524)
T PF05977_consen 195 ---PSSLPRER---F-------------FSAL----------REGLRYVRSSPPLRSVLLRSFLF----NLFASAVWALL 241 (524)
T ss_pred ---ccccchhh---h-------------hhhH----------HHHHHHHhcchHHHHHHHHHHHH----HHhhhHHHHhh
Confidence 00000000 0 0000 01111122222222222211111 11223345567
Q ss_pred HHHHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 259 PLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 259 ~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
|.+.++ .|.++...|++.+..++++++|.++.+. +.+|+++++++..+
T Consensus 242 Pl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~--l~~~~~~~~lv~~~ 290 (524)
T PF05977_consen 242 PLFARDVLGGGASGYGLLLAAFGVGAILGALLLPR--LRRRLSSRRLVLLA 290 (524)
T ss_pred hHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHH--hhcccCcchhhHHH
Confidence 888854 5999999999999999999999999999 88888887776543
No 99
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.73 E-value=5.6e-17 Score=142.05 Aligned_cols=252 Identities=14% Similarity=0.149 Sum_probs=175.1
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHh----hhCchhHH-HHHHHHHHHHHHHhhhh-h-------hHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTR----AFGRKPSV-LMGGAAFLAGSALGGAA-V-------NVYM 86 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~Grr~~~-~~~~~~~~~~~~~~~~~-~-------~~~~ 86 (310)
+...+.+|+++...+.+..+.-+..++..|+.|.++| |+|||+.. ++|.....++.+++... + ....
T Consensus 26 ~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~ 105 (428)
T PF13347_consen 26 YFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVW 105 (428)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHH
Confidence 4456677999999999999999999999999999999 89976555 46777788877776655 3 2233
Q ss_pred HHHHHHHHhhcccccccchhhhhhhccc-ccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCC---C-chhHHHHHhhHH
Q 021634 87 LIFGRLLLGVGVGFANQSVPLYLSEMAP-ARYRGAINNGFQFSIGIGALAANFINYGTEQIKG---G-WGWRVSLALAAV 161 (310)
Q Consensus 87 l~~~r~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~-~~wr~~~~~~~~ 161 (310)
+.+..++..++.........++..|..+ +++|.+..+.-..+..+|.++...+...+....+ . .+|++...+.++
T Consensus 106 ~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~i 185 (428)
T PF13347_consen 106 LFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAI 185 (428)
T ss_pred HHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHH
Confidence 4666677788888888999999999997 4789999999888888888655555444433222 1 279999988888
Q ss_pred HHHHHHHHhhc-ccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHH
Q 021634 162 PASILTLGALF-LPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAM 240 (310)
Q Consensus 162 ~~~~~~~~~~~-~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
+.++..+...+ .+|+++.... .+++.+.++.+++.+++ +.+...
T Consensus 186 v~~v~~~i~~~~~ke~~~~~~~-------------------------------~~~~~~~~~~~~~~~~n----r~~~~l 230 (428)
T PF13347_consen 186 VGLVFFLITFFFVKERSVEVTE-------------------------------QEKKISLRDSLRSLFRN----RPFRIL 230 (428)
T ss_pred HHHHHhhhhhheeeeccccccc-------------------------------cccccccccchhhhccc----chHHHH
Confidence 88776665544 6662110000 00111112233444433 333334
Q ss_pred HHHHHHHhhhHHHHHHhHHHHHHHc-CCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 241 AIPFFQQVTGINVIAFYAPLLFRTI-GLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
.+..+....+........+++.+.. |.+ ...+.......++.+++.++.++ ++||+|+|+.+..+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~--l~~r~gk~~~~~~~~ 297 (428)
T PF13347_consen 231 LLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGR--LSKRFGKKKVYIIGL 297 (428)
T ss_pred HHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHH--HHHHccceeehhhhH
Confidence 4444444445556666777777665 544 56677777888889999999999 999999999887654
No 100
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.72 E-value=3.1e-16 Score=138.95 Aligned_cols=255 Identities=12% Similarity=0.036 Sum_probs=160.8
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHh----hhCc-hhHHHHHHHHHHHHHHHhhhhh------hHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTR----AFGR-KPSVLMGGAAFLAGSALGGAAV------NVYMLI 88 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~Gr-r~~~~~~~~~~~~~~~~~~~~~------~~~~l~ 88 (310)
.+..+.+|+++..+|.+..+.-+..++..|+.|.++| |+|| |+.++.+....+++.++....+ .+..+.
T Consensus 31 ~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~ 110 (473)
T PRK10429 31 YYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVC 110 (473)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHH
Confidence 4456678999999999999999999999999999999 6698 5566667777777765554322 133445
Q ss_pred HHHHHHhhcccccccchhhhhhhcc-cccchhhhhhHHHHHHHHHHHHHHHHHhhh----cccCCCchhHHHHHhhHHHH
Q 021634 89 FGRLLLGVGVGFANQSVPLYLSEMA-PARYRGAINNGFQFSIGIGALAANFINYGT----EQIKGGWGWRVSLALAAVPA 163 (310)
Q Consensus 89 ~~r~l~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~wr~~~~~~~~~~ 163 (310)
+..++.+++.........++..|.. ++++|.+..++-..+..+|..+.+.+...+ ....+..+|+....+.+++.
T Consensus 111 ~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~ 190 (473)
T PRK10429 111 VTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFF 190 (473)
T ss_pred HHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHH
Confidence 5566777778888888889999998 589999988886666666655554443221 11112236887777777666
Q ss_pred HHHHHHhhc-ccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHH
Q 021634 164 SILTLGALF-LPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAI 242 (310)
Q Consensus 164 ~~~~~~~~~-~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (310)
++..+..++ .+|.++....+.+ ++++.++++.++...+++.+.....
T Consensus 191 ~~~~~~~~~~~~e~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~n~~~~~ll~ 238 (473)
T PRK10429 191 IVSTIITLRNVHEVYSSDNQVSA--------------------------------EGSHLTLKDIVALIYKNDQLSCLLG 238 (473)
T ss_pred HHHHHHHHcCceecCCccccccc--------------------------------cccCCCHHHHHHHHhcCHHHHHHHH
Confidence 655444433 6665321000000 0011223333332222233333333
Q ss_pred HHHHHhhhHHHHHHhHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 243 PFFQQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
..+......+....+.+++.+....+....+.+.....++.+++.++.++ +.||+|+|+.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~--l~~r~gkk~~~~~~ 302 (473)
T PRK10429 239 MALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPR--LVKSLSRRILWAGA 302 (473)
T ss_pred HHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHcCcHHHHHHH
Confidence 33333344455555556555544335555666666667888888888999 99999999987644
No 101
>PRK09669 putative symporter YagG; Provisional
Probab=99.72 E-value=1.4e-16 Score=140.18 Aligned_cols=250 Identities=11% Similarity=0.020 Sum_probs=153.4
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhh----hCch-hHHHHHHHHHHHHHHHhhhhhh------HHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRA----FGRK-PSVLMGGAAFLAGSALGGAAVN------VYMLI 88 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr-~~~~~~~~~~~~~~~~~~~~~~------~~~l~ 88 (310)
....+++|+++.+.+.+.++.-+..++..|+.|+++|| +||| +.++.+....+++.++....++ .+.+.
T Consensus 34 ~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~ 113 (444)
T PRK09669 34 YFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYAC 113 (444)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHH
Confidence 45667899999999999999999999999999999998 7875 5555676776666655444432 34555
Q ss_pred HHHHHHhhcccccccchhhhhhhcc-cccchhhhhhHHHHHHHHHHHHHHHHHhhhccc----CCCchhHHHHHhhHHHH
Q 021634 89 FGRLLLGVGVGFANQSVPLYLSEMA-PARYRGAINNGFQFSIGIGALAANFINYGTEQI----KGGWGWRVSLALAAVPA 163 (310)
Q Consensus 89 ~~r~l~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~wr~~~~~~~~~~ 163 (310)
+..++.+.+......+..++.+|+. ++++|++..+....+..+|..+++.+...+... ....+|+..+.+.+++.
T Consensus 114 ~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~ 193 (444)
T PRK09669 114 VTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLG 193 (444)
T ss_pred HHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHH
Confidence 5666667766677777788899988 558899888888777777777666543322211 12357998888877777
Q ss_pred HHHHHHhhc-ccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHH
Q 021634 164 SILTLGALF-LPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAI 242 (310)
Q Consensus 164 ~~~~~~~~~-~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (310)
++..+..++ .+|.++.. +++ +.+.....+..++++..+....
T Consensus 194 ~v~~~~~~~~~~e~~~~~--~~~-------------------------------~~~~~~~~~~~~~n~~~~~l~~---- 236 (444)
T PRK09669 194 VVLFFCCFFMTKERYTPE--VDN-------------------------------SSSVWKDLKLLLGNSQWRIMFI---- 236 (444)
T ss_pred HHHHHHHhCCeEEecCCC--CcC-------------------------------CCCHHHHHHHHhCCchHHHHHH----
Confidence 665554443 45532110 000 0000112334444433222222
Q ss_pred HHHHHhhhHHHHHHhHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 243 PFFQQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
..+.............+++.+..-.+++....+.....+..+++.++.++ +.||+|+|+.+..+
T Consensus 237 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~--l~~r~gk~~~~~~~ 300 (444)
T PRK09669 237 FNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSER--LLGKFDRVRAFKWT 300 (444)
T ss_pred HHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhChHHHHHHH
Confidence 22222222222233333333333222333444455556777788888888 99999999887654
No 102
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.71 E-value=1.1e-15 Score=133.24 Aligned_cols=157 Identities=17% Similarity=0.181 Sum_probs=118.6
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhHHHHh----hhCchhHHHHH-HHHHHHHHHHhhhhhhHH-----------
Q 021634 22 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTR----AFGRKPSVLMG-GAAFLAGSALGGAAVNVY----------- 85 (310)
Q Consensus 22 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~Grr~~~~~~-~~~~~~~~~~~~~~~~~~----------- 85 (310)
+.+++|+++.+.+++..+..+...+.+++.|+++| |+|||+.++.+ .....++..+.+++++..
T Consensus 30 yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~ 109 (477)
T TIGR01301 30 YVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKT 109 (477)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccc
Confidence 44678999999999999999999999999999999 59999998874 566666666666765543
Q ss_pred ------HHHHHHHHHhhcccccccchhhhhhhcccccch--hhhhhHHHHHHHHHHHHHHHHHhhhc--ccC----CC--
Q 021634 86 ------MLIFGRLLLGVGVGFANQSVPLYLSEMAPARYR--GAINNGFQFSIGIGALAANFINYGTE--QIK----GG-- 149 (310)
Q Consensus 86 ------~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~----~~-- 149 (310)
..+++-.+..++.+..++...++++|.+|+++| +.+.++.+...++|.++++.+++... ... ..
T Consensus 110 ~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~ 189 (477)
T TIGR01301 110 KPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEAC 189 (477)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccccc
Confidence 223333344456777788889999999998865 57899999999999999999887541 110 00
Q ss_pred ----chhHHHHHhhHHHHHHHHHHh-hcccCCch
Q 021634 150 ----WGWRVSLALAAVPASILTLGA-LFLPETPN 178 (310)
Q Consensus 150 ----~~wr~~~~~~~~~~~~~~~~~-~~~~es~~ 178 (310)
.+.|..|++.++..++..+.. +..+|.|.
T Consensus 190 ~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~ 223 (477)
T TIGR01301 190 GVSCANLKSCFLIDIILLAILTYIALSAVKENPL 223 (477)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHeeeeeccCC
Confidence 167899999887777766555 45888763
No 103
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.69 E-value=6.3e-15 Score=131.08 Aligned_cols=144 Identities=17% Similarity=0.183 Sum_probs=120.4
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhh-hCchhHHHHHHHHHHHHHHHhhhhh-hHHHHHHHHHHHhhc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRA-FGRKPSVLMGGAAFLAGSALGGAAV-NVYMLIFGRLLLGVG 97 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~ 97 (310)
.++++++|+++++.+++.+.+........+++|+++|| +|||+.+..+.++..++..++++++ +.+.+.++|++.|++
T Consensus 46 ~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig 125 (500)
T PRK09584 46 VYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVG 125 (500)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Confidence 55678899999999888888776666777899999999 5999999999999999988888874 456677889999999
Q ss_pred ccccccchhhhhhhcccccc--hhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHH
Q 021634 98 VGFANQSVPLYLSEMAPARY--RGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASIL 166 (310)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~ 166 (310)
.|...+....++.|++|+++ |..+.++++.+.++|..++|.+++++.+. .|||+.|++.++..++.
T Consensus 126 ~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~---~g~~~~F~i~~i~~~i~ 193 (500)
T PRK09584 126 NGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAK---YGWSVAFALSVVGMLIT 193 (500)
T ss_pred hhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHh---hCHHHHHHHHHHHHHHH
Confidence 99888888899999998653 45678888999999999999999887653 47999999877544443
No 104
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.65 E-value=9.8e-16 Score=112.68 Aligned_cols=135 Identities=27% Similarity=0.392 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccchhhhhhhcccccc
Q 021634 38 SSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARY 117 (310)
Q Consensus 38 ~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~ 117 (310)
+.+.++..+++++.|++.||+|||+.+..+.....++.+.....++++.+.+.+++.|++.+...+....++.|.+|+++
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEE 84 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhh
Confidence 45667888999999999999999999999999999998888888999999999999999999888999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc-ccC
Q 021634 118 RGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF-LPE 175 (310)
Q Consensus 118 r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~-~~e 175 (310)
|++..+..+....+|..+++.+.+.+.+ ..+|++.+++.++..++..+..++ .||
T Consensus 85 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 85 RGVALGLMSAGIALGPLLGPPLGGVLAQ---FLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhHHHHHHHHhHHHHHHHhHHhHHHHhc---ccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999887764 346999998877777766655544 444
No 105
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.65 E-value=3.3e-14 Score=122.31 Aligned_cols=249 Identities=15% Similarity=0.069 Sum_probs=162.3
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhC-chhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccccc
Q 021634 23 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFG-RKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFA 101 (310)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-rr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 101 (310)
-++.|+|..|+|.+.+...+...++++++|.++||++ +|+.+.+..++..+........++++.+++.-++..+...+.
T Consensus 29 L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~p~ 108 (400)
T PF03825_consen 29 LESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFFSPT 108 (400)
T ss_pred HHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHccH
Confidence 3456899999999999999999999999999999986 677877777777777777777888988888888888877777
Q ss_pred ccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHH-HhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCchhh
Q 021634 102 NQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFI-NYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNSL 180 (310)
Q Consensus 102 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~ 180 (310)
.+...++..+...+ ++.-.+-.-...++|..++... ...+....+..+....+++.+...++.....+.+|+.|+..
T Consensus 109 ~pl~dsi~~~~~~~--~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~lp~~~~~~ 186 (400)
T PF03825_consen 109 MPLSDSIALSYLGD--RGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALFLPKTPPKR 186 (400)
T ss_pred HHHHHHHHHHHccc--ccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHhCCCCcccc
Confidence 77777777776642 3333444444555555444322 11122222212233455666655555555556688876211
Q ss_pred HhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhHHH
Q 021634 181 IQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPL 260 (310)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (310)
..++. . ++....+..+++|++. +....+..+...........|.+.
T Consensus 187 ~~~~~-~-----------------------------~~~~~~~~~~llk~~~----~~~Fll~~~l~~~~~~~~~~f~~~ 232 (400)
T PF03825_consen 187 SAKES-V-----------------------------KKLLGLDALKLLKNPR----FLVFLLAAFLIGISHAAYYTFFSI 232 (400)
T ss_pred ccCCC-c-----------------------------ccccchHHHHHhcCcc----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11100 0 0000111123343322 222333333333345567778888
Q ss_pred HHHHcC-CCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 261 LFRTIG-LGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 261 ~~~~~g-~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
|+++.| .+.+..+.+.++..++.++.-...++ +..|+|.|+++.+++
T Consensus 233 yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~--~~~r~g~~~ll~~a~ 280 (400)
T PF03825_consen 233 YLQELGGYSGSTIGILWALGVVAEIPFFFFSGR--FLKRFGIKWLLLLAL 280 (400)
T ss_pred HHHHcccchhhHHHHHHHHHHHHHHHHHHHHHH--HHHhcCHHHHHHHHH
Confidence 999997 77888888888888899999899999 999999999988764
No 106
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.64 E-value=3e-15 Score=132.07 Aligned_cols=268 Identities=11% Similarity=-0.016 Sum_probs=164.2
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhC-----chhHHHHHHHHHH-HHHHHhhhhhhHHHHH-H
Q 021634 17 KEDTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFG-----RKPSVLMGGAAFL-AGSALGGAAVNVYMLI-F 89 (310)
Q Consensus 17 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-----rr~~~~~~~~~~~-~~~~~~~~~~~~~~l~-~ 89 (310)
.-.+.+.+++|+|+++++...++..+...+-.+ +|+++||++ ||+.++++.++.. ++....+..++..... +
T Consensus 47 ~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~ 125 (468)
T TIGR00788 47 PLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAA 125 (468)
T ss_pred hhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHH
Confidence 334667888999999999999999999998666 999999998 7777777776663 4333334334544444 4
Q ss_pred HHHHHhhcccccccchhhhhhhcccccchhhh---hhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHH
Q 021634 90 GRLLLGVGVGFANQSVPLYLSEMAPARYRGAI---NNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASIL 166 (310)
Q Consensus 90 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~ 166 (310)
..++.+++.+......-.+..|..+ +++... .++......+|.++++.+++.+.+. .+|+..|++.++..++.
T Consensus 126 ~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~---~~~~~~f~~~a~l~ll~ 201 (468)
T TIGR00788 126 FIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDK---TLTRILFLITAALLLLQ 201 (468)
T ss_pred HHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHh---cCcchHHHHHHHHHHHH
Confidence 7889999999888999999999998 555443 3334444557888888888877643 46999999988887777
Q ss_pred HHHhhcccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHH
Q 021634 167 TLGALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQ 246 (310)
Q Consensus 167 ~~~~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (310)
.+..++++|+++....+.. ++....... ......+.. ++........++++ .....+...++.
T Consensus 202 ~~~~~~~~E~~~~~~~~~~--~~~~~~~~~------~~~~~~~~~------~~~~~~l~~~l~~~---~i~~~l~fifl~ 264 (468)
T TIGR00788 202 LFVSNLSKERRAFVRPRIG--TYLEMNMAL------LTLGVLANV------KVQILGLRGAIQLL---EIAKPLIFIFLS 264 (468)
T ss_pred HHHHHhccccccccccccc--ccchhhhhh------hhhhHHHHH------HHHHHHHHHHHhcH---HHHHHHHHHHHH
Confidence 6666778886421111000 000000000 000000000 00000111222221 111111111110
Q ss_pred HhhhHHHHHH-hHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 247 QVTGINVIAF-YAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 247 ~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
.......... +. ..-+..|+++.+.+......+++.+++....+. +.+|++.|+++.++.
T Consensus 265 ~~~~~~~~~~~f~-~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~--~~~~~~~r~~l~~~~ 325 (468)
T TIGR00788 265 YANLPGASGSVFC-ATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDR--FLKTFPYRLLFGVTT 325 (468)
T ss_pred HhhcCCCCceeEE-EEcccCCCCcchhhhHHHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHH
Confidence 1111111111 11 111456999999999999999999999999998 889999999877653
No 107
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.63 E-value=1.6e-13 Score=120.28 Aligned_cols=147 Identities=17% Similarity=0.213 Sum_probs=116.8
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhh-CchhHHHHHHHHHHHHHHHhhhhh-hHHHHHHHHHHHhhc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF-GRKPSVLMGGAAFLAGSALGGAAV-NVYMLIFGRLLLGVG 97 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~ 97 (310)
.++.+++|+++.+.+.+.+.+.....++++++|+++||+ |||++++++.++..++.++.+... +...+.++..+.+++
T Consensus 34 ~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG 113 (493)
T PRK15462 34 LYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCG 113 (493)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHh
Confidence 445667899999999999999999999999999999999 999999999999999987766543 222333444444455
Q ss_pred ccccccchhhhhhhccccc--chhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHH
Q 021634 98 VGFANQSVPLYLSEMAPAR--YRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLG 169 (310)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~ 169 (310)
.|...+...++++|.+|++ +|..+.++.+.+.++|..++|.+.+++.+ ..||++.|.+.++..++..+.
T Consensus 114 ~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~---~~Gw~~~F~iaaigm~l~li~ 184 (493)
T PRK15462 114 YGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQE---EYSWAMGFGLAAVGMIAGLVI 184 (493)
T ss_pred cccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHh---hhChHHHHHHHHHHHHHHHHH
Confidence 6666677788999999875 68999999999999999999999888764 357999998876644444433
No 108
>PRK11462 putative transporter; Provisional
Probab=99.62 E-value=6.7e-14 Score=123.41 Aligned_cols=246 Identities=10% Similarity=0.003 Sum_probs=153.1
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhh----hCchhHH-HHHHHHHHHHHHHhhhhhh------HHHHHH
Q 021634 21 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRA----FGRKPSV-LMGGAAFLAGSALGGAAVN------VYMLIF 89 (310)
Q Consensus 21 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr~~~-~~~~~~~~~~~~~~~~~~~------~~~l~~ 89 (310)
...+.+|+++..+|.+..+.-+.-++.-|+.|.++|| +|||+.. +++....+++.+++...++ ...+.+
T Consensus 35 fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~ 114 (460)
T PRK11462 35 FYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAI 114 (460)
T ss_pred HHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHH
Confidence 3456789999999999999999999999999999995 7876554 4566777777666544432 334455
Q ss_pred HHHHHhhcccccccchhhhhhhccc-ccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCC----CchhHHHHHhhHHHHH
Q 021634 90 GRLLLGVGVGFANQSVPLYLSEMAP-ARYRGAINNGFQFSIGIGALAANFINYGTEQIKG----GWGWRVSLALAAVPAS 164 (310)
Q Consensus 90 ~r~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~~~wr~~~~~~~~~~~ 164 (310)
..++..++.........++..|..+ +++|++..++...+..+|..+++.+...+....+ ..+|+....+.+++.+
T Consensus 115 ~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~ 194 (460)
T PRK11462 115 TYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAF 194 (460)
T ss_pred HHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHH
Confidence 6667788888888888899999987 6899999999998888887777666443322211 2368887777777665
Q ss_pred HHHHHhhc-ccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHH
Q 021634 165 ILTLGALF-LPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIP 243 (310)
Q Consensus 165 ~~~~~~~~-~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
+.....+. .+|.++.. +++ .+.+...+..++++..+.. ...
T Consensus 195 i~~~i~~~~~kE~~~~~--~~~--------------------------------~~~~~~l~~~~~Nk~~~~l----~~~ 236 (460)
T PRK11462 195 MMLAFCFFTTKERVEAP--PTT--------------------------------TSMREDLRDIWQNDQWRIV----GLL 236 (460)
T ss_pred HHHHHHHhcceeccCCC--ccC--------------------------------CCHHHHHHHHhCChHHHHH----HHH
Confidence 55544433 45532110 000 0001112233333222222 222
Q ss_pred HHHHhhhHHHHHHhHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhh
Q 021634 244 FFQQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDI 306 (310)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~ 306 (310)
.+..............++.+...-++...+.+.....++++++.+++++ +.||+++|+.+.
T Consensus 237 ~~~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~--l~~r~gkk~~~~ 297 (460)
T PRK11462 237 TIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKP--LTDWKCKVTIFW 297 (460)
T ss_pred HHHHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHH--HHHHhChHHHHH
Confidence 2222222222222333333323222334445666777888889999999 999999998765
No 109
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.62 E-value=1.1e-14 Score=133.35 Aligned_cols=141 Identities=16% Similarity=-0.014 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccchhhhhhhc
Q 021634 33 LTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEM 112 (310)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~ 112 (310)
......+..++..++.++.|+++||+|||++++++.++.++++++.+++++...+++.+++.|++.++.++....+++|+
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556677789999999999999999999999999999999999988888888888888999988888888999999999
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCc
Q 021634 113 APARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETP 177 (310)
Q Consensus 113 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~ 177 (310)
+|++.|++++++......+|.+++|.+++.+... +...++++.++..++..++.+++||+.
T Consensus 677 ~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~----~~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 677 YPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI----TKAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 9999999999999999999999999998766542 245677777777777777777789874
No 110
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.61 E-value=2.9e-14 Score=119.12 Aligned_cols=192 Identities=13% Similarity=0.084 Sum_probs=140.3
Q ss_pred hhhhhHHHHHHHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCC----------
Q 021634 79 GAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKG---------- 148 (310)
Q Consensus 79 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---------- 148 (310)
+...+++.++++-++.|.|.+..++....++++..|+|++++.+++.+.++++|..++|.++..+.....
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 3457899999999999999999999999999999999999999999999999999999999886653210
Q ss_pred ---CchhHHHHHhhHHHHHHHHHHhhc--ccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccch
Q 021634 149 ---GWGWRVSLALAAVPASILTLGALF--LPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHP 223 (310)
Q Consensus 149 ---~~~wr~~~~~~~~~~~~~~~~~~~--~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (310)
..+|+++|++.+.+.++..+.+.+ +||..+ ++ .++.. .++. ..
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~-----~~-~~~~~-----------------------~~~~---~~ 132 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE-----AD-VARVS-----------------------SGDT---TQ 132 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc-----cc-ccccc-----------------------cccc---cc
Confidence 137999998766665555544444 454311 00 00000 0000 00
Q ss_pred hhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhHHHHHHH---cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhc
Q 021634 224 FKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRT---IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVR 300 (310)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g 300 (310)
.++. .+++..+...+..+...........|.+.|+++ .|+++++++...+....+.++|++++++ +.||++
T Consensus 133 ~~~~----~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~--l~~r~g 206 (310)
T TIGR01272 133 KTSA----FQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSA--VMPMIS 206 (310)
T ss_pred hhhH----HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhC
Confidence 0111 123334445566666666777889999999964 3899999999999999999999999999 999999
Q ss_pred cchhhhhc
Q 021634 301 WRKLDIYT 308 (310)
Q Consensus 301 ~r~~~~~~ 308 (310)
+|+.+.++
T Consensus 207 ~~~~l~~~ 214 (310)
T TIGR01272 207 QGRYLAFN 214 (310)
T ss_pred HHHHHHHH
Confidence 98877654
No 111
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.61 E-value=2.4e-14 Score=124.86 Aligned_cols=149 Identities=15% Similarity=0.179 Sum_probs=124.1
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhh----hHHHHHHHHHHHhhcccccccc
Q 021634 29 DSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV----NVYMLIFGRLLLGVGVGFANQS 104 (310)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~ 104 (310)
+.++.+...++..++..++.++.|+++||+|||+++..+.++..++..+..... +.+.+++.+++.|++.+...+.
T Consensus 249 ~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~ 328 (418)
T TIGR00889 249 VVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNIS 328 (418)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 346779999999999999999999999999999999999999888876665532 3456777899999998888888
Q ss_pred hhhhhhhcccccchhhhhhHHH-HHHHHHHHHHHHHHhhhcccCCC---chhHHHHHhhHHHHHHHHHHh-hcccCCc
Q 021634 105 VPLYLSEMAPARYRGAINNGFQ-FSIGIGALAANFINYGTEQIKGG---WGWRVSLALAAVPASILTLGA-LFLPETP 177 (310)
Q Consensus 105 ~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~---~~wr~~~~~~~~~~~~~~~~~-~~~~es~ 177 (310)
...++.|++|+++|+++.++.+ ....+|..++|.+++.+.+..+. +||+..|.+.+++.++..+.. ++++|+.
T Consensus 329 ~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 329 GSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 8899999999999999999997 67889999999999988776443 579999998887777766555 4477764
No 112
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.61 E-value=7.2e-17 Score=143.16 Aligned_cols=272 Identities=15% Similarity=0.180 Sum_probs=3.0
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh-----------------
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA----------------- 81 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~----------------- 81 (310)
.+++++.|+++.++.|++.+.+-++..+..++..++.+|..|-+.+-.|.++.+++++++++-
T Consensus 26 lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~ 105 (539)
T PF03137_consen 26 LTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNG 105 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccc
Confidence 367999999999999999999999999999999999999888889999999999998876641
Q ss_pred ---------------------------------hhHHHHHHHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHH
Q 021634 82 ---------------------------------VNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFS 128 (310)
Q Consensus 82 ---------------------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 128 (310)
.-+..+++++++.|+|....+++..+|+-|..++++-+...|++...
T Consensus 106 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~ 185 (539)
T PF03137_consen 106 NSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAM 185 (539)
T ss_dssp ----------------------------------------------SSS-------------------------------
T ss_pred ccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHH
Confidence 01356778899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcccCC---------------Cc----hhHHHHHhhHHHHHHHHHHhhcccCCchhhHhccCcHHH
Q 021634 129 IGIGALAANFINYGTEQIKG---------------GW----GWRVSLALAAVPASILTLGALFLPETPNSLIQRKSDHQK 189 (310)
Q Consensus 129 ~~~g~~~~~~~~~~~~~~~~---------------~~----~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~ 189 (310)
..+|.++|..+++.+..... +- .|..-|++.++..++..+..+++|++-+...+..+ +
T Consensus 186 ~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~---~ 262 (539)
T PF03137_consen 186 SILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQE---E 262 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccccc---h
Confidence 99999999888876553210 00 25445566666666666666667765332211000 0
Q ss_pred HHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhh---hccccchhHHHHHHHHHHHHHhhhHHHHHHhHHHHHH-Hc
Q 021634 190 AKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKK---IIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFR-TI 265 (310)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 265 (310)
.+...++. + + ...++.+++ +..+......++ .+++..+++.++...+..........++..|.|.|+| ++
T Consensus 263 ~~~~~~~~--~-~--~~~~~~~~~-~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF 336 (539)
T PF03137_consen 263 KESSERKE--E-D--SDKDSFKDP-KSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQF 336 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhhcch--h-h--hhhhccccc-ccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00000000 0 0 000000000 000001122233 3446677888888888888888888999999999996 55
Q ss_pred CCCchhHHHHHHHHHh-hhhhhhhHHHHHHHHHHhcc
Q 021634 266 GLGRLKVCQLSKWIEC-GGSIGFGRNMWVKWMNRVRW 301 (310)
Q Consensus 266 g~~~~~~~~~~~~~~~-~~~~g~~~~~~~~l~d~~g~ 301 (310)
+.++.++..+.....+ ++.+|.+++|+ +++|++-
T Consensus 337 ~~sas~A~~l~G~v~ip~~~~G~llGG~--ivkk~kl 371 (539)
T PF03137_consen 337 GLSASQASLLTGIVSIPGAALGILLGGY--IVKKFKL 371 (539)
T ss_dssp -------------------------------------
T ss_pred CCCHHHHHHHHhhhhcchhheehheEEE--EEEEecC
Confidence 9999999888877654 67788899999 8888743
No 113
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.60 E-value=4.7e-14 Score=118.08 Aligned_cols=248 Identities=12% Similarity=0.075 Sum_probs=174.0
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh------hhHH--HHHHHHHH
Q 021634 22 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA------VNVY--MLIFGRLL 93 (310)
Q Consensus 22 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~------~~~~--~l~~~r~l 93 (310)
.+.-+| +.+..-|++.++.+.+....+.+-|+.||+|-|...+++..+.++++.+-..+ +.++ ..+.+..+
T Consensus 71 ~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~i 149 (480)
T KOG2563|consen 71 VNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSI 149 (480)
T ss_pred HHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHH
Confidence 334445 67778899999999999999999999999999999999999999999886654 3455 67788999
Q ss_pred HhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccC---CCchhHH--HHHhhHHHHHHHHH
Q 021634 94 LGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIK---GGWGWRV--SLALAAVPASILTL 168 (310)
Q Consensus 94 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~wr~--~~~~~~~~~~~~~~ 168 (310)
.+...-.....-..+..-||++++|+.+..+-.++..+|..++.++...+.... ++..|.. .|+...++..+.+.
T Consensus 150 aa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~ 229 (480)
T KOG2563|consen 150 AAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLA 229 (480)
T ss_pred HHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence 998887777777788899999999999999988888888888888877666544 2345654 34444444444333
Q ss_pred Hh-hcccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHH
Q 021634 169 GA-LFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQ 247 (310)
Q Consensus 169 ~~-~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (310)
+. +..++.|+.+....+ +.+ ++.....+.++.+++ +.+....+.+...
T Consensus 230 l~~~~~~~~P~tPps~s~----~~~-----------------------~~~~f~~si~~~~~n----~~F~il~~~ygi~ 278 (480)
T KOG2563|consen 230 LVLFVFTKKPPTPPSASQ----AAL-----------------------QDASFPKSIKSCFKN----RQFIILAICYGIG 278 (480)
T ss_pred HHHHhcCCCCCCCCchhH----hhh-----------------------hcCcHHHHHHHHHcC----ccHHHHHHHHhhh
Confidence 33 334554443222111 000 001112233344433 4455555555555
Q ss_pred hhhHHHHHHhHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccch
Q 021634 248 VTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRK 303 (310)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~ 303 (310)
...++.....+-..+.-.|++...+|+......++++++.++.+. +.||.+.-+
T Consensus 279 ~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gi--i~Dktk~fk 332 (480)
T KOG2563|consen 279 LGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGI--IADKTKKFK 332 (480)
T ss_pred HHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHh--hhhhhhhHH
Confidence 556666666655445555788889999999999999999999999 999976533
No 114
>PRK09848 glucuronide transporter; Provisional
Probab=99.59 E-value=8.6e-14 Score=122.73 Aligned_cols=249 Identities=11% Similarity=0.030 Sum_probs=142.8
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhh----CchhHH-HHHHHHHHHHHHHhh-h----hh--hHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF----GRKPSV-LMGGAAFLAGSALGG-A----AV--NVYML 87 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----Grr~~~-~~~~~~~~~~~~~~~-~----~~--~~~~l 87 (310)
.++++.+|++..++|.+.+...+..++..++.|+++||. |||+.. ..+.+...+..++.. . ++ ..+..
T Consensus 33 ~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (448)
T PRK09848 33 SYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYA 112 (448)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHH
Confidence 567888899999999999999999999999999999996 777655 555554444444321 1 11 12233
Q ss_pred HHHHHHHhhcccccccchhhhhhhcccc-cchhhhhhHHHHHH-----HHHHHHHHHHHhhhcccCCCchhHHHHHhhHH
Q 021634 88 IFGRLLLGVGVGFANQSVPLYLSEMAPA-RYRGAINNGFQFSI-----GIGALAANFINYGTEQIKGGWGWRVSLALAAV 161 (310)
Q Consensus 88 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~ 161 (310)
.+..++.+++.+...+...++..|..++ ++|.+..+.-..+. .++..++|.++....... ..+|.....+.++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~-~~~~~~~~~~~~v 191 (448)
T PRK09848 113 YLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEM-VSVYHFWTIVLAI 191 (448)
T ss_pred HHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCch-hhhHHHHHHHHHH
Confidence 4455677777777777777777776644 67888766654432 344555565544322110 0122212222233
Q ss_pred HHHHHHHHh-hcccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHH
Q 021634 162 PASILTLGA-LFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAM 240 (310)
Q Consensus 162 ~~~~~~~~~-~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
+.++..+.. ...||+++. +.+ +......+++.++++. +...
T Consensus 192 ~~~~~~~~~~~~~~e~~~~---~~~-------------------------------~~~~~~~~~~l~~n~~----f~~~ 233 (448)
T PRK09848 192 AGMVLYFICFKSTRENVVR---IVA-------------------------------QPSLKISLQTLKRNRP----LFML 233 (448)
T ss_pred HHHHHHHHHHcCcEeccCC---Ccc-------------------------------CCCHHHHHHHHhCCch----HHHH
Confidence 333332222 235554210 000 0000112334444332 3333
Q ss_pred HHHHHHHhhhHHHHHHhHHHHHHHc-CCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 241 AIPFFQQVTGINVIAFYAPLLFRTI-GLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
.+..+.............|+++++. |.++...+.......++.+++.++.++ +.||+|+|+.+.+|.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~--l~~r~g~~~~~~~g~ 301 (448)
T PRK09848 234 CIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPG--MVARIGKKNTFLIGA 301 (448)
T ss_pred HHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhCcHHHHHHHH
Confidence 3333333344455566677777654 766655555555445667778888888 999999999887653
No 115
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.59 E-value=7.7e-13 Score=116.07 Aligned_cols=248 Identities=17% Similarity=0.168 Sum_probs=169.5
Q ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHH-HHHHHHHHHHHhhhh--hhHHHHHHHHHHHhhcccccccchhh
Q 021634 31 QLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLM-GGAAFLAGSALGGAA--VNVYMLIFGRLLLGVGVGFANQSVPL 107 (310)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~-~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~ 107 (310)
+..++..++..+..++..|+.|.++|+-|+||.++. ...+..+++....+. .+++...+.-++.-++.+.......+
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445788899999999999999999999997766554 444455556655553 34444445556666777788888899
Q ss_pred hhhhcccccch--------------------------hhhhhHHHHHHHHHHHHHHHHHhhhcccCC-----CchhHHHH
Q 021634 108 YLSEMAPARYR--------------------------GAINNGFQFSIGIGALAANFINYGTEQIKG-----GWGWRVSL 156 (310)
Q Consensus 108 ~~~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----~~~wr~~~ 156 (310)
++.|..+++++ ++..+.-.....+|.++.-.+...+....+ ..+-|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999999888 888888777777887777666554432222 23468888
Q ss_pred HhhHHHHHHHHHHh-hcccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhH
Q 021634 157 ALAAVPASILTLGA-LFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQ 235 (310)
Q Consensus 157 ~~~~~~~~~~~~~~-~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (310)
.+.++.-++..+.. +++||.|+....+.. .+-.....+ ...+.+|+..+.+
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~-~~~~~~g~~---------------------------~l~~t~k~~~~~~ 281 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSG-SSYLRFGFK---------------------------RLWRTFKEIRKLR 281 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCcc-hhHHHHHHH---------------------------HHHHHHHHHHhCh
Confidence 88777766655554 557887642111110 000011111 1112222222334
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhHHHHHH-HcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccc--hhhhhc
Q 021634 236 LLMAMAIPFFQQVTGINVIAFYAPLLFR-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWR--KLDIYT 308 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r--~~~~~~ 308 (310)
......+.++...-+.+.+......|.+ ++|+++.+...+.....+.+++|.++.++ +.||+|.| ++++++
T Consensus 282 ~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~--l~~r~g~k~~~~l~~~ 355 (477)
T PF11700_consen 282 QLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGW--LQDRFGPKTKRTLLIS 355 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhCCchhHHHHHH
Confidence 4455666666666778888888888886 66999999999999999999999999999 99999999 666554
No 116
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.57 E-value=1.7e-13 Score=117.41 Aligned_cols=254 Identities=15% Similarity=0.115 Sum_probs=176.7
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhh----hCch-hHHHHHHHHHHHHHHHhhhhhh------HHHHHH
Q 021634 21 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRA----FGRK-PSVLMGGAAFLAGSALGGAAVN------VYMLIF 89 (310)
Q Consensus 21 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr-~~~~~~~~~~~~~~~~~~~~~~------~~~l~~ 89 (310)
...+.+|+++..+|.+..+.=+.-++.-|+.|.++|| +||+ +.++.+.+..++.+.++..+++ .....+
T Consensus 38 fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~v 117 (467)
T COG2211 38 FYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALV 117 (467)
T ss_pred HHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHH
Confidence 3456789999999999999999999999999999995 7865 5556677888888888777653 344556
Q ss_pred HHHHHhhcccccccchhhhhhhccc-ccchhhhhhHHHHHHHHHHHHHHHHHhhhcc----cCCCchhHHHHHhhHHHHH
Q 021634 90 GRLLLGVGVGFANQSVPLYLSEMAP-ARYRGAINNGFQFSIGIGALAANFINYGTEQ----IKGGWGWRVSLALAAVPAS 164 (310)
Q Consensus 90 ~r~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~wr~~~~~~~~~~~ 164 (310)
...+.+++......+..++..|+.+ ++||.+..+.-+.+..+|.++...+...+.. -....||+....+.++++.
T Consensus 118 tY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~ 197 (467)
T COG2211 118 TYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGV 197 (467)
T ss_pred HHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHH
Confidence 7888999999999999999999975 5899999999888888886665554433322 2224589998888888888
Q ss_pred HHHHHhhc-ccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHH
Q 021634 165 ILTLGALF-LPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIP 243 (310)
Q Consensus 165 ~~~~~~~~-~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
+..+.+++ .+|.+..... .+++.+.++++.+....+++.+....+.
T Consensus 198 i~~l~~~~~v~ER~~~~~~---------------------------------~~~~~~~~~~~~~~~~~~Nrp~~~~l~~ 244 (467)
T COG2211 198 ILLLFCFFNVKERVVETQP---------------------------------TKTGVKLKLKDSFLLIFKNRPLLLLLLM 244 (467)
T ss_pred HHHHHHHHHhhcccCcccc---------------------------------CcccccccHHHHHHHHHccchHHHHHHH
Confidence 77776665 6665431100 0001122233222222222333333344
Q ss_pred HHHHhhhHHHHHHhHHHHHHH-cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 244 FFQQVTGINVIAFYAPLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
.++...+.+.......+|.+- .|.+.............+.+++.++... +.+|+|+|+++.++.
T Consensus 245 ~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~--L~~~~gkk~~~~~~~ 309 (467)
T COG2211 245 NLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPR--LVKKFGKKKLFLIGL 309 (467)
T ss_pred HHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHH--HHHHhchHHHHHHHH
Confidence 555555566666666666654 3777777777777777777777888888 999999999988764
No 117
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.55 E-value=9.3e-15 Score=130.35 Aligned_cols=265 Identities=15% Similarity=0.158 Sum_probs=198.5
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh-----------------
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA----------------- 81 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~----------------- 81 (310)
-..+++.|+++.++.|++.+.+-++..+...+..+..-|.-|-+.+-+|.++.+++++++++.
T Consensus 120 IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~ 199 (735)
T KOG3626|consen 120 ITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQS 199 (735)
T ss_pred hhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhcc
Confidence 367889999999999999999999999999999999999999999999999999999987752
Q ss_pred ---h---------------------------h----HH-HHHHHHHHHhhcccccccchhhhhhhcccccchhhhhhHHH
Q 021634 82 ---V---------------------------N----VY-MLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQ 126 (310)
Q Consensus 82 ---~---------------------------~----~~-~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 126 (310)
+ + ++ .++++.++.|+|..+.++...+|+-|...+++-+..+|+..
T Consensus 200 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~ 279 (735)
T KOG3626|consen 200 VENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILY 279 (735)
T ss_pred ccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHH
Confidence 0 0 23 56678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCc----------------hhHHHHHhhHHHHHHHHHHhhcccCCchhhHhccCcHHHH
Q 021634 127 FSIGIGALAANFINYGTEQIKGGW----------------GWRVSLALAAVPASILTLGALFLPETPNSLIQRKSDHQKA 190 (310)
Q Consensus 127 ~~~~~g~~~~~~~~~~~~~~~~~~----------------~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~~ 190 (310)
....+|.++|-+++.++......+ .|..-|++.+.+.++..+..+++|...+...++.+ ++.
T Consensus 280 ~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~--~~~ 357 (735)
T KOG3626|consen 280 SMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQKRKR--ARD 357 (735)
T ss_pred HHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccccccch--hhh
Confidence 999999999999988776532111 36666777788878777888888876432211100 000
Q ss_pred HHHHHHhcCCcchHHHHHHHHHhhhccccccchhh---hhccccchhHHHHHHHHHHHHHhhhHHHHHHhHHHHHH-HcC
Q 021634 191 KLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFK---KIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFR-TIG 266 (310)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g 266 (310)
.+. ...+++ ....+.......+ +.+++...+++++...+........+.++..|+|.|++ ++|
T Consensus 358 ~~~---~k~~~~----------~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg 424 (735)
T KOG3626|consen 358 LHV---LKTESG----------GAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFG 424 (735)
T ss_pred hcc---cccccc----------cccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcC
Confidence 000 000000 0001111111222 33445566788888889988999999999999999995 569
Q ss_pred CCchhHHHHHHHHHh-hhhhhhhHHHHHHHHHHhc
Q 021634 267 LGRLKVCQLSKWIEC-GGSIGFGRNMWVKWMNRVR 300 (310)
Q Consensus 267 ~~~~~~~~~~~~~~~-~~~~g~~~~~~~~l~d~~g 300 (310)
.++..+..+.....+ +..+|.+++|+ ++.|+.
T Consensus 425 ~sas~An~l~G~i~vp~~~~Gi~lGG~--iikkfk 457 (735)
T KOG3626|consen 425 ISASLANILTGSIGVPAAAVGIFLGGL--IIKKFK 457 (735)
T ss_pred CCHHHHHHHhhhhhhhhhhhhhhccce--eeeeec
Confidence 999999999866544 46788889999 888864
No 118
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.54 E-value=1.6e-13 Score=118.89 Aligned_cols=152 Identities=15% Similarity=0.128 Sum_probs=124.1
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
.+++++++.++.+.+++.+...++..++.++.|+++||+|||+.+..+.....+........++.+.+++.+++.+++.+
T Consensus 241 ~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g 320 (393)
T PRK15011 241 LFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIG 320 (393)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 34567789999999998888888888999999999999999998887766666555555556778878888988888777
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccC
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPE 175 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~e 175 (310)
...+....+..|.+|+ +|++++++++....+|..+++.+++.+.+. .+|+..+++.+++.++..+..++.||
T Consensus 321 ~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 321 ILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEI---WNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 7777777888999875 599999999988999999999998877653 47999999888888877777777765
No 119
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.51 E-value=1.4e-12 Score=110.75 Aligned_cols=251 Identities=17% Similarity=0.124 Sum_probs=133.6
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHH--HHHHHHh-hhh----hhHH-HHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAF--LAGSALG-GAA----VNVY-MLIFGR 91 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~--~~~~~~~-~~~----~~~~-~l~~~r 91 (310)
..++++.|+|.+++|.+.++..+...+.+++.|.++||.|.||-++...... ..+.+.. .+. .|.+ ..+++-
T Consensus 32 iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~ 111 (412)
T PF01306_consen 32 IWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGG 111 (412)
T ss_dssp HHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTT
T ss_pred HHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667999999999999999999999999999999999766554433222 2222222 222 2221 122222
Q ss_pred HHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhh
Q 021634 92 LLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL 171 (310)
Q Consensus 92 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~ 171 (310)
+..|++.....++.-++..++.. +.+.-.|=.-+..++|..++..+++.+... +-+..||+....+++..++.+
T Consensus 112 i~l~~~f~~~~~~~Ea~~er~sr--~~~feYG~~R~wGSig~ai~s~~~G~L~~i----~p~~~fwi~s~~~~il~lll~ 185 (412)
T PF01306_consen 112 IYLGLVFNAGVPLSEAYAERVSR--RNGFEYGRARMWGSIGFAIASLLAGILFNI----NPNIIFWIASAAAIILLLLLL 185 (412)
T ss_dssp TTTTTTTTTHHHHHHHHHHHHHH--HHSS-HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccchHHHHHHHHHHH--HhcCCcchHHHHhhHHHHHHHHHhheeeee----CccHHHHHHHHHHHHHHHHHH
Confidence 33333333334444444333331 122233334456666766666776655542 345677776666555554444
Q ss_pred c-ccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhh
Q 021634 172 F-LPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTG 250 (310)
Q Consensus 172 ~-~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (310)
+ -|+.++.....+.+ .+++++.+.++..+. .+.+.++.+.+........
T Consensus 186 ~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~l-~k~~~fw~~~l~v~g~~~~ 235 (412)
T PF01306_consen 186 LLKPDVPPQAEVADAL-----------------------------GAKKDKVSLKDVLSL-FKMRNFWFFVLFVIGVAAI 235 (412)
T ss_dssp SS---SSSSS-SSTTS-----------------------------SS------HHHHHHH-TTSHHHHHHHHHHHHHHHH
T ss_pred HcCCcCchhhhhhccc-----------------------------ccCCCCCcHHHHHHH-hcchhHHHHHHHHHHHHHH
Confidence 4 34433222111110 000111122333221 2223333333333333344
Q ss_pred HHHHHHhHHHHHHHc----CCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 251 INVIAFYAPLLFRTI----GLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 251 ~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
+..+....+.|..+. +.++...+.+.+...+..++.-....+ +.+|+|.|+.++++
T Consensus 236 Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~--li~rig~k~~Llla 295 (412)
T PF01306_consen 236 YDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPW--LINRIGAKNLLLLA 295 (412)
T ss_dssp HHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHH--HHHhcChHhHHHHH
Confidence 556655566666554 334566788888888888888899999 99999999988764
No 120
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.51 E-value=1.5e-12 Score=111.93 Aligned_cols=162 Identities=14% Similarity=0.129 Sum_probs=127.8
Q ss_pred cccccccc-ccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCc-hhHHHHHHHHHHHHHHHh-hh---hh-hHHHHHH
Q 021634 17 KEDTKISN-YCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGR-KPSVLMGGAAFLAGSALG-GA---AV-NVYMLIF 89 (310)
Q Consensus 17 ~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~~~~~~~~~~~~-~~---~~-~~~~l~~ 89 (310)
...|++++ |.+.+.+..|++.++..++.+++++++|+++.|.+. |+.++.|.++..+++++. +. .+ ..+.+++
T Consensus 56 s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~ 135 (488)
T KOG2325|consen 56 SMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLV 135 (488)
T ss_pred ecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Confidence 34566666 678889999999999999999999999999999996 888899999999998877 33 23 6778889
Q ss_pred HHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCC-------c---hhHHHHHhh
Q 021634 90 GRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGG-------W---GWRVSLALA 159 (310)
Q Consensus 90 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-------~---~wr~~~~~~ 159 (310)
+|++.|+|.|. ......|+++....++|.++++....+..+|..+||.++.++...... . -+..+-|+.
T Consensus 136 ~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m 214 (488)
T KOG2325|consen 136 ARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLM 214 (488)
T ss_pred HHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHH
Confidence 99999998654 677789999999999999999999998899999999888877654321 1 123455666
Q ss_pred HHHHHHHHHHh-hcccCCchh
Q 021634 160 AVPASILTLGA-LFLPETPNS 179 (310)
Q Consensus 160 ~~~~~~~~~~~-~~~~es~~~ 179 (310)
++..++.++.. +++.|.++.
T Consensus 215 ~i~~i~~~v~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 215 AILWIIYIVIILFFFKEVYRG 235 (488)
T ss_pred HHHHHHHHHHHHhheeecccC
Confidence 66666665554 447776653
No 121
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.50 E-value=5.1e-13 Score=113.64 Aligned_cols=147 Identities=22% Similarity=0.263 Sum_probs=132.7
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchh-HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccc
Q 021634 24 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKP-SVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFAN 102 (310)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 102 (310)
+.++.++.+.++..+...++..++.++.+++.||+|||+ .+..+..+..++.+.....++.+...+..++.|++.+...
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 283 (352)
T cd06174 204 EVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAF 283 (352)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccc
Confidence 344889999999999999999999999999999999999 9999999999999999888888899999999999999999
Q ss_pred cchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcc
Q 021634 103 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFL 173 (310)
Q Consensus 103 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~ 173 (310)
+....++.|..|+++|++.+++.+....+|..+++.+.+.+.+ ..+|+..+.+.+++.++..+..+++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~---~~~~~~~~~~~~~~~~i~~i~~~~~ 351 (352)
T cd06174 284 PALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD---TGGYGGVFLILAALALLAALLLLLL 351 (352)
T ss_pred hhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCcchHHHHHHHHHHHHHHHheec
Confidence 9999999999999999999999999999999999999887764 3579999999888888776665443
No 122
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.50 E-value=2.5e-13 Score=118.88 Aligned_cols=147 Identities=18% Similarity=0.185 Sum_probs=122.8
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccchh
Q 021634 27 KFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVP 106 (310)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 106 (310)
+.+..+.+++.++..++..++.+++|+++||+|||+.+..+.++..++.++.+++++.+.+++.+++.|++.+...+...
T Consensus 258 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 337 (420)
T PRK09528 258 EQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVF 337 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667889999999999999999999999999999999999999998888888888999888999999998877777778
Q ss_pred hhhhhcccccchhhhhhH-HHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc-ccCC
Q 021634 107 LYLSEMAPARYRGAINNG-FQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF-LPET 176 (310)
Q Consensus 107 ~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~-~~es 176 (310)
.++.|.+|++.|+...+. ++....+|..+++.+.+.+.+. .||+..|.+.+++.++..+..++ ++++
T Consensus 338 ~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~---~G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 338 KYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDS---IGFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHh---hCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 889999999999887655 6777889999999998877754 46999999877777665544443 4443
No 123
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.49 E-value=4.7e-13 Score=116.61 Aligned_cols=154 Identities=14% Similarity=0.064 Sum_probs=124.0
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
|.+.++.|.++.+.+...+...++..++.++.|+++||+|||+.+..+.....++.+...+.++.+.+.+..++.|++.+
T Consensus 244 p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 323 (406)
T PRK11551 244 PSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVV 323 (406)
T ss_pred HHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 34445678999999999999999999999999999999999999888777777776666667777777777888888877
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccC
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPE 175 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~e 175 (310)
...+....++.|.+|+++|++..++.+....+|..++|.+.+.+.+.. .+|...++......++..+..+++.+
T Consensus 324 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (406)
T PRK11551 324 GGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG--RSTVGVIGASIPVILVAALAALLLVS 397 (406)
T ss_pred hHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC--CchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 778888899999999999999999999999999999999988776542 24666666666555555555444433
No 124
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.48 E-value=7.8e-13 Score=114.93 Aligned_cols=143 Identities=15% Similarity=0.099 Sum_probs=119.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccchhhhhhh
Q 021634 32 LLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSE 111 (310)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~ 111 (310)
+.++..+.+.++..++.++.|++.||+|||+.+..+..+..++.+...+.++.+.+++.+++.|++.+..++.....+.|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~ 329 (399)
T PRK05122 250 GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVK 329 (399)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34566677888889999999999999999999998888888888877778888888888999999998888877788889
Q ss_pred cccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCc
Q 021634 112 MAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETP 177 (310)
Q Consensus 112 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~ 177 (310)
..|+++|+++.++++....+|..+++.+.+.+.+. .||+..+++.++..++..+..+++++++
T Consensus 330 ~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (399)
T PRK05122 330 RVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASW---FGYPSIFLAAALAALLGLALTWLLYRRA 392 (399)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999999999988888887766543 4699999988887777766666555443
No 125
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.47 E-value=7.8e-13 Score=113.71 Aligned_cols=142 Identities=10% Similarity=-0.019 Sum_probs=119.3
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhH--HHHHHHHHHHhhccc
Q 021634 22 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNV--YMLIFGRLLLGVGVG 99 (310)
Q Consensus 22 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~~ 99 (310)
..++++.++.+.+.+.+...++..+++++.|+++||+|||+.+..+..+..++.+...+.++. ..+....++.|++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 310 (377)
T TIGR00890 231 YGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWG 310 (377)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhc
Confidence 346678888899999999999999999999999999999999999988888888777666543 234456778888888
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHH
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASIL 166 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~ 166 (310)
...+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+. .||++.|.+.+++.++.
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~---~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 311 GTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTE---IGFEYTFIVTGAFALTS 374 (377)
T ss_pred cchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhh---hchhhHHHHHHHHHHHh
Confidence 87888888999999999999999999999999999999998877643 47999998877766554
No 126
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.46 E-value=1.6e-12 Score=111.94 Aligned_cols=151 Identities=16% Similarity=0.178 Sum_probs=123.8
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccc
Q 021634 21 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGF 100 (310)
Q Consensus 21 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 100 (310)
.+.+++|.++.+.+++.+.......++.++.|++.||+|||+.+..+.++..++.....+.++.+.+.+.+++.|++.+.
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 304 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGI 304 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45577899999999988887777888899999999999999998888777666665556677888888889999998888
Q ss_pred cccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccC
Q 021634 101 ANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPE 175 (310)
Q Consensus 101 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~e 175 (310)
..+....++.|..|+ +|+++.++++....+|..+++.+++.+.+. .+|+..+++.++..++..+...+++|
T Consensus 305 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 305 LAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAER---WSYHAVYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccchhHHHHHHHHHHHHHHHHheecC
Confidence 788888888998875 567999999999999999999998877653 46999999888887777766665543
No 127
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.44 E-value=3.8e-12 Score=113.37 Aligned_cols=158 Identities=18% Similarity=0.123 Sum_probs=113.0
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhh--h-HH-HHHHHHHHHh
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV--N-VY-MLIFGRLLLG 95 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~--~-~~-~l~~~r~l~G 95 (310)
|.+.++.|.+.....+......+...++.++.++++||+|||+.++.+.++.+++.++..... + .. ....+-++.+
T Consensus 295 p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~ 374 (479)
T PRK10077 295 PEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYV 374 (479)
T ss_pred HHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHH
Confidence 445566788877777777778888899999999999999999999999998888877665431 1 11 2222334444
Q ss_pred hcccc-cccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhc---ccCCCchhHHHHHhhHHHHHHHHHHhh
Q 021634 96 VGVGF-ANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE---QIKGGWGWRVSLALAAVPASILTLGAL 171 (310)
Q Consensus 96 ~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~wr~~~~~~~~~~~~~~~~~~ 171 (310)
.+.+. ..+....++.|.+|+++|++++++......+|..+++.+...+. ...++.+|++.|++.++.+++..+..+
T Consensus 375 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (479)
T PRK10077 375 AAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMW 454 (479)
T ss_pred HHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHH
Confidence 44333 23667889999999999999999999998888888766654333 122345788888887777666655554
Q ss_pred -cccCCc
Q 021634 172 -FLPETP 177 (310)
Q Consensus 172 -~~~es~ 177 (310)
+.||+.
T Consensus 455 ~~~~e~~ 461 (479)
T PRK10077 455 KFVPETK 461 (479)
T ss_pred hccccCC
Confidence 467653
No 128
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.43 E-value=2.1e-12 Score=114.47 Aligned_cols=153 Identities=14% Similarity=-0.023 Sum_probs=112.8
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHH--hhhhhhHHHHHHHHHHHhhc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSAL--GGAAVNVYMLIFGRLLLGVG 97 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~r~l~G~~ 97 (310)
.++++++|+|..+.++..+...++..++.+++|+++||+|||+.+.....+..++... ....++.....+.+++.|++
T Consensus 283 ~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 362 (467)
T PRK09556 283 VYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFL 362 (467)
T ss_pred HHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 4577889999999999999999999999999999999999998776654444433322 22334566666778888865
Q ss_pred ccccccchhhhhhhcccccchhhhhhHHHHHHHH-HHHHHHHHHhhhccc---------CCCchhHHHHHhhHHHHHHHH
Q 021634 98 VGFANQSVPLYLSEMAPARYRGAINNGFQFSIGI-GALAANFINYGTEQI---------KGGWGWRVSLALAAVPASILT 167 (310)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~~~~~---------~~~~~wr~~~~~~~~~~~~~~ 167 (310)
.............|.+|++.||++.++.+....+ |..++|.+.+.+.+. ....+|+..|++..+..++..
T Consensus 363 ~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~ 442 (467)
T PRK09556 363 VFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCI 442 (467)
T ss_pred HhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHH
Confidence 4333333345677999999999999999888776 768888887777661 013469999988777777665
Q ss_pred HHhhc
Q 021634 168 LGALF 172 (310)
Q Consensus 168 ~~~~~ 172 (310)
+..++
T Consensus 443 ~~~~~ 447 (467)
T PRK09556 443 CLMAI 447 (467)
T ss_pred HHHHH
Confidence 55544
No 129
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.43 E-value=2.8e-11 Score=99.72 Aligned_cols=232 Identities=15% Similarity=0.158 Sum_probs=146.1
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccccccc
Q 021634 24 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQ 103 (310)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 103 (310)
+++|+++.|++.+....+...++..++.|.++||+|||+.-+..+++..++++. -..++++.++++|++.|++.+..+.
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~-k~~~~~~~L~~GRvlgGiaTSLLfS 140 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT-KHSSNYPVLLLGRVLGGIATSLLFS 140 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-HhccccHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999988864 4568899999999999999888877
Q ss_pred chhhhh-hhc----ccccchhhhhhHHH-HHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc-ccCC
Q 021634 104 SVPLYL-SEM----APARYRGAINNGFQ-FSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF-LPET 176 (310)
Q Consensus 104 ~~~~~~-~~~----~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~-~~es 176 (310)
.-.+.+ .|+ +|++..+...+... ..+++-.+.++.++-++.+..+ .|-..+|....++.++..+.... .+|+
T Consensus 141 ~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~-~g~vaPF~~a~~~l~~~~~~I~~~W~EN 219 (354)
T PF05631_consen 141 AFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFG-FGPVAPFDAAIVLLAVAAVLILKTWPEN 219 (354)
T ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhC-CCCcchHHHHHHHHHHHHHHHHhccccc
Confidence 776654 454 23333333333333 2333334444455444443222 23356777766666655554433 4554
Q ss_pred chhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHH
Q 021634 177 PNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAF 256 (310)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (310)
+....++....++- +..++.+.+ .++.+.............+..+..
T Consensus 220 yg~~~~~~~~~~~~------------------------------~~a~~~i~~---d~ril~LG~~qslFE~smy~FVfl 266 (354)
T PF05631_consen 220 YGDTSSSSSLSGSF------------------------------REAWRAILS---DPRILLLGLIQSLFEGSMYLFVFL 266 (354)
T ss_pred CCCcccccchHHHH------------------------------HHHHHHHHc---CchhHHHHHHHHHHHHHHHHheee
Confidence 32111000000000 001122221 145556666667777777777777
Q ss_pred hHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHH
Q 021634 257 YAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMW 292 (310)
Q Consensus 257 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~ 292 (310)
|.|.+-. .+ ....-|..++...++.++|+.+...
T Consensus 267 WtPaL~~-~~-~~~P~GlIFssFM~a~MlGS~lf~~ 300 (354)
T PF05631_consen 267 WTPALDP-DD-EELPLGLIFSSFMVAMMLGSSLFSR 300 (354)
T ss_pred eeceecC-CC-CCCCchHHHHHHHHHHHHHHHHHHH
Confidence 7887651 11 2234677777777777777777755
No 130
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.41 E-value=1.3e-12 Score=116.74 Aligned_cols=140 Identities=11% Similarity=-0.061 Sum_probs=107.4
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh--hhHHHHHHHHHHHhhcc
Q 021634 21 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA--VNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 21 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~ 98 (310)
.+++++|.+..+.+++.+...++..++.++.|+++||+|||+++..+.++..+..+..... .+.+.+.+..++.+...
T Consensus 301 ~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (496)
T PRK03893 301 YLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLG 380 (496)
T ss_pred HHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHh
Confidence 3446889999999999999999999999999999999999999888877666655443332 33344444455544433
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHH
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPA 163 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~ 163 (310)
....+....++.|.+|+++|++++++.+....+|..++|.+++.+.+. .+|+..+...+...
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~---~g~~~~~~~~~~~~ 442 (496)
T PRK03893 381 QGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQR---LDLGTALASLSFSL 442 (496)
T ss_pred cccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhcc---CChHHHHHHHHHHH
Confidence 344566778899999999999999999999999999999998877754 46887775544433
No 131
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.41 E-value=4e-11 Score=100.37 Aligned_cols=251 Identities=13% Similarity=0.104 Sum_probs=158.8
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhC-----chhHHHH-HHHHHHHHHHHhhhh-----h-------
Q 021634 21 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFG-----RKPSVLM-GGAAFLAGSALGGAA-----V------- 82 (310)
Q Consensus 21 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-----rr~~~~~-~~~~~~~~~~~~~~~-----~------- 82 (310)
-+..|++++..-.+.+.+...+... ..+.+|+.||+.+ ||..+++ |..+...+..+..++ .
T Consensus 5 VMIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~ 83 (403)
T PF03209_consen 5 VMIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSG 83 (403)
T ss_pred hHHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 3556888888888888888877665 5899999999999 8866654 555555555444432 2
Q ss_pred hH--H--HHHHHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHH--H
Q 021634 83 NV--Y--MLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVS--L 156 (310)
Q Consensus 83 ~~--~--~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~--~ 156 (310)
+. + ...+.-.+.|+|.+...+...++++|..|+|+|+++.++.+....+|.+++..+.+.+.+... .-|.. +
T Consensus 84 ~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s--~~rL~~v~ 161 (403)
T PF03209_consen 84 PFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFS--PERLIQVI 161 (403)
T ss_pred ccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccC--HHHHHHHH
Confidence 22 2 233457888999999999999999999999999999999999999999998888664443222 22322 2
Q ss_pred HhhHHHHHHHHHHhhcccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHH
Q 021634 157 ALAAVPASILTLGALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQL 236 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (310)
...+++.+...+...+=.|.++..... .+.+++......+++.+.++..++.
T Consensus 162 ~~~a~i~~~l~~ia~wg~E~r~~~~~~----------------------------~~~~~~~~f~~a~~~~~~~~~a~~f 213 (403)
T PF03209_consen 162 QGVALIALLLNLIALWGQEPRRSRRAA----------------------------AAERPRPPFREAWRQVWASPQARRF 213 (403)
T ss_pred HHHHHHHHHHHHHHHHhcccCCccccc----------------------------CCCCCCccHHHHHHHHHhCCChhHH
Confidence 222333332223333323322110000 0001111122345555555555555
Q ss_pred HHHHHHHHHHHhhhHHHHHHhHHHHH-HHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHH-Hhccchhhhhc
Q 021634 237 LMAMAIPFFQQVTGINVIAFYAPLLF-RTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMN-RVRWRKLDIYT 308 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d-~~g~r~~~~~~ 308 (310)
+..+++..+. ++.-...+-.|- +-+|+++.+...++.....+..+|....++ +.. |.+++++-..|
T Consensus 214 ~~fl~l~t~a----~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~--~l~~~~~~~~~a~~G 281 (403)
T PF03209_consen 214 FVFLFLGTLA----FFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGF--LLSRRLGKKRTAALG 281 (403)
T ss_pred HHHHHHHHHH----HHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HhcCCCCchHHHHHH
Confidence 5544444332 233333444444 445999999999999999999999999988 554 56666654443
No 132
>PRK09952 shikimate transporter; Provisional
Probab=99.40 E-value=7.2e-12 Score=110.12 Aligned_cols=155 Identities=14% Similarity=0.072 Sum_probs=113.3
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhh---h-hhHHHHHHHHHHHhh
Q 021634 21 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA---A-VNVYMLIFGRLLLGV 96 (310)
Q Consensus 21 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~---~-~~~~~l~~~r~l~G~ 96 (310)
++++++|.+.+....+.....+...++.++.|+++||+|||+.+..+.++..++.+.... . ++.+.+++..++.++
T Consensus 276 y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (438)
T PRK09952 276 YSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANI 355 (438)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 455677888877666666667777888999999999999999988887665554433322 1 234444455667778
Q ss_pred cccccccchhhhhhhcccccchhhhhhHHH-HHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccC
Q 021634 97 GVGFANQSVPLYLSEMAPARYRGAINNGFQ-FSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPE 175 (310)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~e 175 (310)
+.+...+....++.|.+|++.|+...++.. .+..+|..++|.+.+.+.+..+ .+|+..+...++..++..+..+.++|
T Consensus 356 ~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~-~~~~~~~~~~~~~~~i~~v~~~~~~~ 434 (438)
T PRK09952 356 AHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG-GSWHSVAIYLLAGCLISAMTALLMKD 434 (438)
T ss_pred HHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC-CCchHHHHHHHHHHHHHHHHHHHccc
Confidence 777778888899999999999998888844 4455788888988887755332 24888888777777777777666776
Q ss_pred C
Q 021634 176 T 176 (310)
Q Consensus 176 s 176 (310)
+
T Consensus 435 ~ 435 (438)
T PRK09952 435 N 435 (438)
T ss_pred c
Confidence 4
No 133
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.40 E-value=5.5e-11 Score=99.44 Aligned_cols=249 Identities=14% Similarity=0.080 Sum_probs=164.2
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchh-HHHHHHHHHHHHHHHhhhhhh--HH-HHHHHHHHHhhcccccccc
Q 021634 29 DSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKP-SVLMGGAAFLAGSALGGAAVN--VY-MLIFGRLLLGVGVGFANQS 104 (310)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~-~~~~~~~~~~~~~~~~~~~~~--~~-~l~~~r~l~G~~~~~~~~~ 104 (310)
+.+..+...++..+..++-+|+.|.++|+.|+|| .+-....+.+++.+...++++ ++ ..++.-.+..++.......
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 3456788889999999999999999999999655 445556666666666666654 44 4455678888888888899
Q ss_pred hhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccc---------------CCCchhHHHHHhhHHHHHHHHHH
Q 021634 105 VPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQI---------------KGGWGWRVSLALAAVPASILTLG 169 (310)
Q Consensus 105 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~---------------~~~~~wr~~~~~~~~~~~~~~~~ 169 (310)
..+++.+..++++-++..+.-.....+|+.+.-+........ .+...-|..+.+.++--++..+.
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhH
Confidence 999999999998888877775555555555443332111100 12234677777766666665555
Q ss_pred hhc-ccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHh
Q 021634 170 ALF-LPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQV 248 (310)
Q Consensus 170 ~~~-~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (310)
.++ .+|.++-. ......... ...+. ..++++..++ +.+....+..+...
T Consensus 216 m~~~v~~~~~~~---~~~~~~l~~-------------g~k~L----------~~t~k~i~~~----~~i~~FLiA~~~~~ 265 (438)
T COG2270 216 MILNVHDAEKIS---SPPPTALRN-------------GFKEL----------KSTFKEIRGR----KNLVLFLIARFFYI 265 (438)
T ss_pred HHhccccccccc---ccchHHHHH-------------HHHHH----------HHHHHHHhcc----cchHHHHHHHHHHH
Confidence 444 55543210 000000000 01111 1122333322 23344445555555
Q ss_pred hhHHHHHHhHHHHHH-HcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 249 TGINVIAFYAPLLFR-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 249 ~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
-+.+........+.. ++|++..+.........+.+++|+++.++ +.||+|.|+++..++
T Consensus 266 DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~--Ld~rfg~k~vl~~~l 325 (438)
T COG2270 266 DGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGF--LDERFGSKPVLMIGL 325 (438)
T ss_pred hhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhCCceeehHHH
Confidence 577888888888886 77999999999999999999999999999 999999998877664
No 134
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.40 E-value=1.3e-13 Score=108.64 Aligned_cols=259 Identities=10% Similarity=0.030 Sum_probs=161.1
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhh-hCchhHHHHHHHHHHHHHHHhh---hhhhHHHHHHHHHHHh
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRA-FGRKPSVLMGGAAFLAGSALGG---AAVNVYMLIFGRLLLG 95 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G 95 (310)
.+...|.+++.++..++-+++..-..+-+.++|++.|| +|-|..-++-++...++.++.+ ..+.+|.+..+|++-|
T Consensus 68 ~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FG 147 (459)
T KOG4686|consen 68 IDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFG 147 (459)
T ss_pred hhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeec
Confidence 34556667777788899999999999999999999996 6877766666666667766554 4689999999999999
Q ss_pred hcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCC----chhHHHHHhhHHHHHHHHHHhh
Q 021634 96 VGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGG----WGWRVSLALAAVPASILTLGAL 171 (310)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~~wr~~~~~~~~~~~~~~~~~~ 171 (310)
+|.-..-.....|..-|+..|+.+.++|+......+|..+--.+-.++.+..++ .+ .....+...+....+....
T Consensus 148 IGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~g-hT~LG~~l~~~~~tc~~sl 226 (459)
T KOG4686|consen 148 IGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVG-HTLLGLWLCFEVKTCKQSL 226 (459)
T ss_pred cCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccch-HHHHHHHHHHHHHHHHHHH
Confidence 998877788889999999999999999999988888876544443322221110 00 0010000000000000000
Q ss_pred cccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhH
Q 021634 172 FLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGI 251 (310)
Q Consensus 172 ~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (310)
......+-..+.|+..+++-.+. ..+ .....+ .....+.++.+...+++.....
T Consensus 227 ------ical~lg~~D~rAerilh~e~g~---------------~Ge--~pkLtd---v~~f~ppfw~~~iicv~yyva~ 280 (459)
T KOG4686|consen 227 ------ICALSLGLSDDRAERILHLEEGF---------------LGE--EPKLTD---VNTFYPPFWVLVIICVLYYVAW 280 (459)
T ss_pred ------HHHHHhhhhhhHHHHHHhhhcCc---------------ccC--Cccccc---ccccCccHHHHHHHHHHHHHHH
Confidence 00001111111222111111110 000 111111 1112233444444445555555
Q ss_pred HHHHHhHHHHHH-HcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhh
Q 021634 252 NVIAFYAPLLFR-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 307 (310)
Q Consensus 252 ~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~ 307 (310)
..+...-|.+++ +.|+|+..++...+.......+.+.+.+. ++||+|++.+.+.
T Consensus 281 fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~--i~Dk~G~n~~wv~ 335 (459)
T KOG4686|consen 281 FPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGA--ISDKYGFNLWWVA 335 (459)
T ss_pred HHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHH--hHhhhcceehhHH
Confidence 667777788885 56999999999999988888888888898 9999999876553
No 135
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.39 E-value=1.3e-12 Score=115.38 Aligned_cols=143 Identities=9% Similarity=-0.070 Sum_probs=116.0
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhh--CchhHHHH--HHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 24 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF--GRKPSVLM--GGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--Grr~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
+++|.+..+.+++.++..++..+++++.|+++||. ++|+...+ +.++.+++.++....++++.+++.+++.|++.+
T Consensus 269 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g 348 (455)
T TIGR00892 269 KDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFG 348 (455)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhc
Confidence 56799999999999999999999999999999984 34433333 334444555566677888888899999999999
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHH
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTL 168 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~ 168 (310)
...+....++.|.+|++++++..++++....+|..++|.+++.+.+..+ +|++.|++.++..++..+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g--~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 349 SVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATK--NYKYIFYASGSIVVSAGL 415 (455)
T ss_pred hHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcC--CcchHHHHhhHHHHHHHH
Confidence 8888889999999999999999999999999999999999887765432 588898887777665544
No 136
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.37 E-value=4.3e-11 Score=102.16 Aligned_cols=150 Identities=22% Similarity=0.258 Sum_probs=128.3
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhh-CchhHHHHHHHHHHHHHHHhhhhh--hHHHHHHHHHHHhhcc
Q 021634 22 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF-GRKPSVLMGGAAFLAGSALGGAAV--NVYMLIFGRLLLGVGV 98 (310)
Q Consensus 22 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~ 98 (310)
..+.+|+|+++..-+.+.+...--...+++|+++||+ |+|++++.|.++..+|.+..+.+. +...++++-.+.++|.
T Consensus 52 ~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~ 131 (498)
T COG3104 52 LGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGT 131 (498)
T ss_pred ccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcc
Confidence 3344779999999999998888889999999999997 999999999999999999998884 7888899999999999
Q ss_pred cccccchhhhhhhccccc--chhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhccc
Q 021634 99 GFANQSVPLYLSEMAPAR--YRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLP 174 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~ 174 (310)
|..=+....++.|.+|++ +|-..++++.++.++|++++|.+.+.+.+. .+|...|...++-....++..+..+
T Consensus 132 Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~---~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 132 GLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAIN---YGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred ccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHh---hCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999999999864 356688889999999999999998877754 5699999888877777666655544
No 137
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.37 E-value=8.6e-12 Score=110.71 Aligned_cols=155 Identities=16% Similarity=0.088 Sum_probs=115.9
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhh-----hh------hHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA-----AV------NVYMLI 88 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~-----~~------~~~~l~ 88 (310)
+.+.+++|.+..+.++......++..++.++.|+++||+|||+.+..+.++..++.++.++ .+ +...+.
T Consensus 308 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (481)
T TIGR00879 308 PTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIV 387 (481)
T ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHH
Confidence 4455677888888899999999999999999999999999999999888877777666552 11 222233
Q ss_pred HHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHH
Q 021634 89 FGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTL 168 (310)
Q Consensus 89 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~ 168 (310)
...++.+.......+....++.|.+|+++|+++.++......+|..+++.+.+.+.+. .+|++.|++.++++++..+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~---~~~~~~f~~~~~~~~~~~i 464 (481)
T TIGR00879 388 FILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLES---IGVGGVFIFFGGLNVLGLI 464 (481)
T ss_pred HHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCccceehhHHHHHHHHHH
Confidence 3333333322333466667789999999999999999999999999999887766543 4688888888888777666
Q ss_pred Hhhc-ccCCc
Q 021634 169 GALF-LPETP 177 (310)
Q Consensus 169 ~~~~-~~es~ 177 (310)
..++ .||++
T Consensus 465 ~~~~~~~~~~ 474 (481)
T TIGR00879 465 FVYFFLPETK 474 (481)
T ss_pred HHheecccCC
Confidence 6544 66653
No 138
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.36 E-value=1.4e-11 Score=106.33 Aligned_cols=146 Identities=15% Similarity=0.065 Sum_probs=115.2
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccccc
Q 021634 22 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFA 101 (310)
Q Consensus 22 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 101 (310)
..++.|.++++.+.+.+...++..+++++.|++.||+|+|+.+..+.....++..... +........++.|++....
T Consensus 226 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~l~g~~~~~~ 302 (381)
T PRK03633 226 YLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML---SQAAMAPALFILGAAGFTL 302 (381)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHhH
Confidence 3345688999999999999999999999999999999999999888877777665443 2233345667778776677
Q ss_pred ccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcc
Q 021634 102 NQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFL 173 (310)
Q Consensus 102 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~ 173 (310)
.+.....+.|..|+++++...+.......+|..++|.+++.+.+. .+|++.|.+.+.+.++..+..+..
T Consensus 303 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~---~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 303 YPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQN---YSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCccHHHHHHHHHHHHHHHHHHhc
Confidence 888888889999988888888888888999999999998877654 468888888777776655554443
No 139
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.36 E-value=1e-11 Score=108.53 Aligned_cols=153 Identities=12% Similarity=0.052 Sum_probs=125.2
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccccc
Q 021634 22 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFA 101 (310)
Q Consensus 22 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 101 (310)
.++.+|.++.+.+++.+...++..++.++.+++.||.++++.+..+..+..++.++..+.++.+...++.++.|++.+..
T Consensus 250 ~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 329 (417)
T PRK10489 250 ADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAIS 329 (417)
T ss_pred HHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHH
Confidence 34448999999999999999999999999999999988888888888888888777777888887788889999888777
Q ss_pred ccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHH-HHhhcccCCc
Q 021634 102 NQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILT-LGALFLPETP 177 (310)
Q Consensus 102 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~-~~~~~~~es~ 177 (310)
.+....++.|..|++.|+++++++.....+|..+++.+.+.+.+. .|++..+++.++..++.. +....+||.+
T Consensus 330 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (417)
T PRK10489 330 SLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAM---MTPVASASASGFGLLIIGVLLLLVLGELR 403 (417)
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHH---hchhhHHHHHHHHHHHHHHHHHHhccccc
Confidence 777788899999999999999999999999999999998877754 357777776665555443 4445566653
No 140
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.35 E-value=1.1e-11 Score=108.13 Aligned_cols=137 Identities=15% Similarity=0.043 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccchhhhhhhc
Q 021634 33 LTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEM 112 (310)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~ 112 (310)
.+.+.++..++..++.++.|+++||+|||+.+..+..+..++.+...+.++.+.+.+.+++.|++.+...+....++.+.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYN 339 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHh
Confidence 45566677788889999999999999999999999888888777777778888888899999999998888888888999
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc
Q 021634 113 APARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF 172 (310)
Q Consensus 113 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~ 172 (310)
.|+++|++.++..+....+|..++|.+++.+.+. .+|+..|++.++..++..+..++
T Consensus 340 ~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~---~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 340 SSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISAN---YGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred CCcccceeeehHHHHHHHHHHHhhHHHHHHHHhh---cchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998877643 46999999988887776665544
No 141
>PRK12382 putative transporter; Provisional
Probab=99.35 E-value=1.5e-11 Score=106.74 Aligned_cols=137 Identities=13% Similarity=0.111 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccchhhhhhhc
Q 021634 33 LTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEM 112 (310)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~ 112 (310)
.+...+.+.++..+++++.|++.||+|||+.+..+..+..++.++..+.++.+.+.++.++.|++.+...+.....+.|.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 330 (392)
T PRK12382 251 AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKR 330 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 45556677788889999999999999999999999888888888877788888888889999999888888888888999
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc
Q 021634 113 APARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF 172 (310)
Q Consensus 113 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~ 172 (310)
+|+++|+++.++++....+|..+++.+.+.+.+. .||+..|.+.+++.++..+..++
T Consensus 331 ~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 331 VPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATS---FGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCchHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998877654 46999999888777766655443
No 142
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.34 E-value=3.3e-11 Score=104.09 Aligned_cols=142 Identities=9% Similarity=0.023 Sum_probs=124.0
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccccccc
Q 021634 24 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQ 103 (310)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 103 (310)
+|+|.++.+.+.+.+...++..++.++.+++.||+|+|+.+.++.+...+..+..+++++.+.+++.+++.|+..+...+
T Consensus 233 ~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~ 312 (382)
T TIGR00902 233 QAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHL 312 (382)
T ss_pred HHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhhhcccccchhhhhhHHH-HHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh
Q 021634 104 SVPLYLSEMAPARYRGAINNGFQ-FSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA 170 (310)
Q Consensus 104 ~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~ 170 (310)
....++.+. |+++|++..++++ ...++|..+++.+++.+.+.. ++ ..|++.+.+.++..+..
T Consensus 313 ~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~---g~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 313 AAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL---GA-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cH-HHHHHHHHHHHHHHHHH
Confidence 999999998 9999999999986 577899999999999888653 45 45666666666554443
No 143
>PRK03545 putative arabinose transporter; Provisional
Probab=99.34 E-value=4e-11 Score=103.93 Aligned_cols=148 Identities=14% Similarity=0.076 Sum_probs=116.0
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHH-HhhhhhhHHHHHHHHHHHhhcc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSA-LGGAAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~r~l~G~~~ 98 (310)
+.+.+++|.+..+.+++.+...++..+++++.|+++||+|||+... +..+..++.. +....++.+.+.++.++.|++.
T Consensus 230 ~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~ 308 (390)
T PRK03545 230 PFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWGIAI 308 (390)
T ss_pred HHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 4455667899999999999999999999999999999999887544 4444444433 3345677777888888999987
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF 172 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~ 172 (310)
+...+.....+.|..| ++|++++++++....+|..+++.+++.+.+. .+++..+++.+++.++..+..+.
T Consensus 309 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~---~g~~~~~~~~~~~~~~~~~~~~~ 378 (390)
T PRK03545 309 MCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLH---LGLSSIGYVGAALALAALVWSIL 378 (390)
T ss_pred hcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cChhHHHHHHHHHHHHHHHHHHH
Confidence 7666667777888766 6889999999999999999999998877754 57999999888877776655544
No 144
>PRK03699 putative transporter; Provisional
Probab=99.33 E-value=1.3e-11 Score=107.21 Aligned_cols=152 Identities=13% Similarity=0.034 Sum_probs=122.6
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
+.+++++|+|+.+.+.+.+.+.++..++.++.|+++||+|||+.+.....+..+...+....++.+.+.+..++.|++.+
T Consensus 230 ~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 309 (394)
T PRK03699 230 EYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSS 309 (394)
T ss_pred HHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHH
Confidence 44557789999999999999999999999999999999999999988877777766666667777777777788888877
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccC
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPE 175 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~e 175 (310)
..++....+..|..| +++++..+.......+|..++|.+.+.+.+. .||+..+++.+++.++..+.+.+.++
T Consensus 310 ~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 310 AIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAH---FGLQAALLTANGLYAVVFVMCILLGF 381 (394)
T ss_pred HHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHH---hCchhhhhhhHHHHHHHHHHHHHHHH
Confidence 777777777778775 4567778888888889999999998877654 46889988888777777666655544
No 145
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.33 E-value=8.3e-11 Score=99.49 Aligned_cols=271 Identities=12% Similarity=0.099 Sum_probs=172.9
Q ss_pred cccccc-cccchhHHH-HHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhc
Q 021634 20 TKISNY-CKFDSQLLT-SFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVG 97 (310)
Q Consensus 20 ~~i~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 97 (310)
|++.+. .|++.+|+. -+.-+..-.+.+..++...++|..+.|++++++.+...+...+..+.++...+-+..++.|++
T Consensus 28 ~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~ 107 (412)
T PF01770_consen 28 PYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLA 107 (412)
T ss_pred HHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHH
Confidence 445554 788888864 555666667788889999999999999999999999999999999999999999999999998
Q ss_pred ccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCc
Q 021634 98 VGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETP 177 (310)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~ 177 (310)
.+. ..+..+|+-...|+++--++.+.......+|..++..++-.+... +..+++...++......+.++..+++|..+
T Consensus 108 ~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~-~~~sy~~L~~isl~~~~~a~~~~~fLP~~~ 185 (412)
T PF01770_consen 108 TAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSF-GGVSYFQLNYISLASVSLALLIALFLPMPK 185 (412)
T ss_pred HHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 654 677788898888988888888888888888877777777755543 224677777776666666777778888766
Q ss_pred hhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhcc-ccccchhhhh---ccccchhHHHHHHHHHHHHHhhhHHH
Q 021634 178 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTA-KTINHPFKKI---IQRKYRPQLLMAMAIPFFQQVTGINV 253 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (310)
+....+++..++......+.+..++..+..++.++..+.. ......++.+ ++.-+.++.++...+.+....++++-
T Consensus 186 ~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~q 265 (412)
T PF01770_consen 186 RSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQ 265 (412)
T ss_pred cccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHH
Confidence 5443332211111100000000000000000000000000 0001111122 22333445555556666666667777
Q ss_pred HHHhHHHHHHHc---CCCchhHHHHHHHHHhhhhhhhhHHHH
Q 021634 254 IAFYAPLLFRTI---GLGRLKVCQLSKWIECGGSIGFGRNMW 292 (310)
Q Consensus 254 ~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~g~~~~~~ 292 (310)
+..|.....++. +-...-.|..-+...+.+.++.+..++
T Consensus 266 v~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~ 307 (412)
T PF01770_consen 266 VINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGY 307 (412)
T ss_pred HHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhH
Confidence 777777777766 333444566666667777777777777
No 146
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.31 E-value=7e-11 Score=103.85 Aligned_cols=154 Identities=11% Similarity=0.103 Sum_probs=132.1
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCch--hHHHHHHHHHHHHHHHhhh--------hhhHHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRK--PSVLMGGAAFLAGSALGGA--------AVNVYMLIF 89 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr--~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~ 89 (310)
...++++|++..+...+.-+..+..++|++++|++.||+|.| ++++.+.+++.+..+...+ .++.+.+.+
T Consensus 306 i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~ 385 (477)
T PF11700_consen 306 IYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWV 385 (477)
T ss_pred HHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHH
Confidence 345668999999999999999999999999999999999999 8988888888666665555 577888889
Q ss_pred HHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHH
Q 021634 90 GRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLG 169 (310)
Q Consensus 90 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~ 169 (310)
.-++.|++.|..++...++.+|..|+++.+..+|++....-....+||.+-+.+.+..+ +-|+.+....++.++.+++
T Consensus 386 ~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg--~~r~g~~~l~~lf~~gl~l 463 (477)
T PF11700_consen 386 LAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG--SQRYGFLFLLVLFLIGLIL 463 (477)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CchhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888887665 3567777767776666666
Q ss_pred hhcccC
Q 021634 170 ALFLPE 175 (310)
Q Consensus 170 ~~~~~e 175 (310)
.+++++
T Consensus 464 l~~v~~ 469 (477)
T PF11700_consen 464 LFFVDV 469 (477)
T ss_pred Hhhccc
Confidence 666654
No 147
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.29 E-value=2.5e-11 Score=105.01 Aligned_cols=142 Identities=14% Similarity=0.105 Sum_probs=108.7
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHH--HHhhh--hhhHHHHHHHHHHHh
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGS--ALGGA--AVNVYMLIFGRLLLG 95 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~--~~~~~--~~~~~~l~~~r~l~G 95 (310)
..++++++.++.+.+...+...++..++.++.|+++||+|||+.+..+..+..+.. ....+ .++.+.+....++.|
T Consensus 244 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 323 (394)
T TIGR00883 244 TYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLA 323 (394)
T ss_pred HHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 33456788899999999999999999999999999999999998776555444333 12222 245666677788889
Q ss_pred hcccccccchhhhhhhcccccchhhhhhH-HHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHH
Q 021634 96 VGVGFANQSVPLYLSEMAPARYRGAINNG-FQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPA 163 (310)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~ 163 (310)
++.+...+....++.|.+|+++|+++.++ .+.+..+|..++|.+++.+.+..+ +|+..++..++..
T Consensus 324 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g--~~~~~~~~~~~~~ 390 (394)
T TIGR00883 324 LIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG--DWYAIGYYLAALA 390 (394)
T ss_pred HHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC--cchhHHHHHHHHH
Confidence 88888889999999999999999999988 456677888899999887776433 2776665555443
No 148
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.29 E-value=3.4e-11 Score=104.66 Aligned_cols=136 Identities=16% Similarity=0.025 Sum_probs=108.9
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHH-HhhhhhhHHHHHHHHHHHhhccc
Q 021634 21 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSA-LGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 21 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+..+..+..+..+ .....++.+.+.+..++.|++.+
T Consensus 264 ~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (405)
T TIGR00891 264 YLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQ 343 (405)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHc
Confidence 34567899999999999999999999999999999999999998887776533332 33344566666667777777777
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHh
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLAL 158 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~ 158 (310)
...+....++.|.+|+++|++++++.+....+|..++|.+.+.+.+..+. |+..+..
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~--~~~~~~~ 400 (405)
T TIGR00891 344 GIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDE--YGTALAS 400 (405)
T ss_pred cchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccc--cchhHHh
Confidence 77788888999999999999999999999999999999998888764331 5555443
No 149
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.28 E-value=8e-11 Score=101.79 Aligned_cols=147 Identities=15% Similarity=0.065 Sum_probs=105.5
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchh--HHH------HHHHHHHHHHHHhhhhhhHHHHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKP--SVL------MGGAAFLAGSALGGAAVNVYMLIFGR 91 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~--~~~------~~~~~~~~~~~~~~~~~~~~~l~~~r 91 (310)
..++++++.++.+.+++.+...++..++.++.|+++||+|||+ ... .+.++..+........++.+......
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (399)
T TIGR00893 240 TYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALV 319 (399)
T ss_pred HHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 3455678889999999999999999999999999999999996 111 11111111111222223444444444
Q ss_pred HHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCch-hHHHHHhhHHHHHHHHHHh
Q 021634 92 LLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWG-WRVSLALAAVPASILTLGA 170 (310)
Q Consensus 92 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-wr~~~~~~~~~~~~~~~~~ 170 (310)
.+.+.+.+ ..+....++.|.+|+++|+++.++.+....+|..+++.+.+.+.+. .+ |+..+++.++..++..+..
T Consensus 320 ~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 320 ALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAAT---TGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccC---CCchhHHHHHHHHHHHHHHHHH
Confidence 44444444 6788899999999999999999999999999999999998777653 35 8888888777766655444
No 150
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.28 E-value=8.7e-11 Score=101.86 Aligned_cols=151 Identities=16% Similarity=0.055 Sum_probs=114.2
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHhhcccccc
Q 021634 24 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA-AVNVYMLIFGRLLLGVGVGFAN 102 (310)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~r~l~G~~~~~~~ 102 (310)
+++|.+..+.+...+.+.++..++.++.|++.||+|||+.+..+..+..++...... .++...+ .-++.|++.+...
T Consensus 233 ~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~g~g~g~~~ 310 (393)
T PRK09705 233 IEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--WAMVCGLGLGGAF 310 (393)
T ss_pred HHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH--HHHHHHHhccchH
Confidence 357899999999999999999999999999999999999998888777776654432 2222222 2245677777777
Q ss_pred cchhhhhhhccc-ccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh-hcccCCch
Q 021634 103 QSVPLYLSEMAP-ARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETPN 178 (310)
Q Consensus 103 ~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~~ 178 (310)
+.......+..+ +++|++..++.+....++..++|.+.+++.+..+ +|...+.+.++..++..+.. .+.||+++
T Consensus 311 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 311 PLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG--NYLMDWAFHALCVVGLMIITLRFAPARFP 386 (393)
T ss_pred HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CchHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 777666667764 5789999999999999999999999888877544 37777777766666655554 44677643
No 151
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.27 E-value=1.3e-10 Score=101.16 Aligned_cols=148 Identities=14% Similarity=0.093 Sum_probs=110.9
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHH-HHHHHHHHHHHHhhh-----hhhHHHHHHHHHHH
Q 021634 21 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVL-MGGAAFLAGSALGGA-----AVNVYMLIFGRLLL 94 (310)
Q Consensus 21 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~-~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~ 94 (310)
...+++|.++.+.+.+.+...++..++.++.|+++||+|||+.+. .+.+...++.+.... .++.+...+..++.
T Consensus 247 ~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (402)
T TIGR00897 247 MFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIAL 326 (402)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHH
Confidence 334668999999999999999999999999999999999988764 333333333332221 24566667778888
Q ss_pred hhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcc
Q 021634 95 GVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFL 173 (310)
Q Consensus 95 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~ 173 (310)
|++.+...+ ....+.|.. +++|+++.++.+....+|..++|.+++.+.+. .||+..+++.+++.++..+...|+
T Consensus 327 G~~~~~~~~-~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~---~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 327 GIFLAGYVP-LAAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGF---FGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHH-HHHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cchHHHHHHHHHHHHHHHHHHHHh
Confidence 887776544 345567765 56899999999999999999999998877654 469999998888877766665554
No 152
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.26 E-value=4.3e-10 Score=100.24 Aligned_cols=154 Identities=12% Similarity=0.051 Sum_probs=115.4
Q ss_pred cccccccccchhHHHHHHH-HHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHh---hhh-hhHHHHHHHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTS-SLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALG---GAA-VNVYMLIFGRLLL 94 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~---~~~-~~~~~l~~~r~l~ 94 (310)
+.+.+++|.++++.++... ...++..++.++.|+++||+|+|+.+.++.++..++.+.. +.. ++.+.+...-++.
T Consensus 247 ~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~ 326 (491)
T PRK11010 247 TFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFE 326 (491)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 4556678999999999974 5668999999999999999999988777666555443322 222 3444444455665
Q ss_pred hhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhccc
Q 021634 95 GVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLP 174 (310)
Q Consensus 95 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~ 174 (310)
.++.|...+....+..+..+++.+++..++.+....+|..+++.+.+.+.+. .||+..|.+.++++++..+...+++
T Consensus 327 ~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~---~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 327 NLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEA---HGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hChHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555566788889999999999999999999999988887887777653 4699999888888887776666665
Q ss_pred CC
Q 021634 175 ET 176 (310)
Q Consensus 175 es 176 (310)
++
T Consensus 404 ~~ 405 (491)
T PRK11010 404 QT 405 (491)
T ss_pred hc
Confidence 43
No 153
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.26 E-value=8.8e-11 Score=105.16 Aligned_cols=140 Identities=23% Similarity=0.097 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhh----HHHHHHHHHHHhhcccccccchhhhhhhcc
Q 021634 38 SSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVN----VYMLIFGRLLLGVGVGFANQSVPLYLSEMA 113 (310)
Q Consensus 38 ~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~ 113 (310)
.+..++..++.++.++++||+|||+.++++..+..++..+.++..+ ...+...-+...++.....+....+.+|.+
T Consensus 342 ~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 421 (502)
T TIGR00887 342 IIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVF 421 (502)
T ss_pred HHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccC
Confidence 3344566678899999999999999998888777776655544321 111111111112222233456677789999
Q ss_pred cccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCC-------CchhHHHHHhhHHHHHHHHHHhhcccCCc
Q 021634 114 PARYRGAINNGFQFSIGIGALAANFINYGTEQIKG-------GWGWRVSLALAAVPASILTLGALFLPETP 177 (310)
Q Consensus 114 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~~wr~~~~~~~~~~~~~~~~~~~~~es~ 177 (310)
|++.|+++.++.+....+|..+++.+.+.+.+..+ +.++...+++.++..++..+..+++||+.
T Consensus 422 p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~ 492 (502)
T TIGR00887 422 PTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETK 492 (502)
T ss_pred chhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEeccCC
Confidence 99999999999999999999999988776654321 23455677777777666666666789874
No 154
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.25 E-value=7.4e-11 Score=98.66 Aligned_cols=152 Identities=19% Similarity=0.164 Sum_probs=133.0
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccc
Q 021634 23 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFAN 102 (310)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 102 (310)
.+++|++..+...+.....+..++|++++|++.||+|.|+++..++++..+.++...+...-..+.++-.+.|...|+.+
T Consensus 280 ~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~q 359 (438)
T COG2270 280 AADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQ 359 (438)
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHH
Confidence 45899999999999999999999999999999999999999999999999999988887777777788899999999999
Q ss_pred cchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCC
Q 021634 103 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPET 176 (310)
Q Consensus 103 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es 176 (310)
....+|.++..|+++-++.+|+++...-.+..++|.+-..+.+..+ +-|.-+....++.++.++..+.+|+.
T Consensus 360 A~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg--~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 360 ASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITG--SSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhc--chhhHHHHHHHHHHhhHhhEEeecCC
Confidence 9999999999999999999999999999999999999887777665 35666666666666666666666654
No 155
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.24 E-value=6.3e-11 Score=105.22 Aligned_cols=150 Identities=13% Similarity=0.052 Sum_probs=104.0
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCch-------hHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRK-------PSVLMGGAAFLAGSALGGAAVNVYMLIFGRL 92 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 92 (310)
+.+.+++|++..+.+.+.++..++..++.++.|+++||+||| ....+..++..++.++....++.+...+.-+
T Consensus 277 ~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~ 356 (476)
T PLN00028 277 EYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMI 356 (476)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 344567899999999999999999999999999999999875 2333333333343444455555555555555
Q ss_pred HHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc
Q 021634 93 LLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF 172 (310)
Q Consensus 93 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~ 172 (310)
+.+++.+...+....++.+.. +++|+.+.++...+..+|..+++.+-. ..+..+|+..|++.+++.++..+..++
T Consensus 357 l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~----~~~~~~y~~~f~~~~~~~~i~~~~~~~ 431 (476)
T PLN00028 357 LFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF----TGSSYSTETGISLMGVMIIACTLPVAF 431 (476)
T ss_pred HHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH----hcCCccHhhHHHHHHHHHHHHHHHHHh
Confidence 566655444555555566654 478999999988877788877776532 222346999999888887777766666
Q ss_pred cc
Q 021634 173 LP 174 (310)
Q Consensus 173 ~~ 174 (310)
++
T Consensus 432 ~~ 433 (476)
T PLN00028 432 IH 433 (476)
T ss_pred ee
Confidence 54
No 156
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.24 E-value=1.5e-10 Score=100.74 Aligned_cols=242 Identities=14% Similarity=0.136 Sum_probs=149.9
Q ss_pred HHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhc--ccccccchhhhhhhccccc
Q 021634 39 SLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVG--VGFANQSVPLYLSEMAPAR 116 (310)
Q Consensus 39 ~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~--~~~~~~~~~~~~~~~~~~~ 116 (310)
...+...+.++..|.++||+|||..+....+...+..+...+.. +|.+. +.++. .+.......++++|....+
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~ 144 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEE 144 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchh
Confidence 34667788999999999999999999999988888877766655 44433 44443 2456677789999999999
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh-hcccCCchhhHhccCcHHHHHHHHH
Q 021634 117 YRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETPNSLIQRKSDHQKAKLMLQ 195 (310)
Q Consensus 117 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~~~~~~~~~~~~~~~~~~~ 195 (310)
+|....++.......+..++|.++...... .+.-..|.+..+..++..+.. .++||+........ ....
T Consensus 145 ~R~~~~gll~~~~~~~~~~~p~~~~~~~~~---~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~-------~~~~ 214 (463)
T KOG2816|consen 145 ERSSSIGLLSGTFGAGLVIGPALGGYLVKF---LGIALVFLIAAASGILSLLYMLLFLPESLQEKERSD-------ATLR 214 (463)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHh---cCchHHHHHHHHHHHHHHHHHhhccccccCcccccc-------cccc
Confidence 999999999999999999999998877765 356678888777777766655 45888753221110 0000
Q ss_pred HhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhHHHHH-HHcCCCchhHHH
Q 021634 196 RVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLF-RTIGLGRLKVCQ 274 (310)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~ 274 (310)
+.......... .....+...+....+..+.......+..........-..++++ ...++++.+.+.
T Consensus 215 ~~~~~~~~~~~-------------~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~ 281 (463)
T KOG2816|consen 215 ELTPGSLDSSH-------------VADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSD 281 (463)
T ss_pred ccCCCcccchh-------------hhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHH
Confidence 00000000000 0011111111111111122122222221111111111223444 356999999999
Q ss_pred HHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 275 LSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 275 ~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
+.+..+....++.++.... +...++.|++...|+
T Consensus 282 ~~~~~~~~~~i~~l~~~~~-l~~~l~~~~~i~lGl 315 (463)
T KOG2816|consen 282 LLSLVSILGIISQLLLLPL-LSSILGEKRLISLGL 315 (463)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHhhhhHhhHHH
Confidence 9999988888988888831 677788888665554
No 157
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.23 E-value=2e-10 Score=100.87 Aligned_cols=153 Identities=14% Similarity=0.045 Sum_probs=96.5
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhh--h--hhhHHHHHHHHHHHh
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGG--A--AVNVYMLIFGRLLLG 95 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~--~--~~~~~~l~~~r~l~G 95 (310)
+.+.+++|.+.++.+...++..++..+++++.|+++||+|||+.+.++..+..+..+... . .++....+..-.+.+
T Consensus 268 ~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (432)
T PRK10406 268 KYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCAL 347 (432)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 345567888998999989888888899999999999999999988776654433332111 1 122222222222222
Q ss_pred hcccccccchhhhhhhcccccchhhhhhHHHHHHHH-HHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhccc
Q 021634 96 VGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGI-GALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLP 174 (310)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~ 174 (310)
.+.+...+....+++|++|++.|+.+.++.+....+ .....|.+...+... + .|...+++.++..++..+..++++
T Consensus 348 ~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~-g--~~~~~~~~~~~~~~i~~~~~~~l~ 424 (432)
T PRK10406 348 LIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSI-G--METAFFWYVTLMAVVAFLVSLMLH 424 (432)
T ss_pred HHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHh-C--CCcHHHHHHHHHHHHHHHHHHHhh
Confidence 333333445667889999999999999997755443 233466665544322 1 255566666666666555555554
Q ss_pred C
Q 021634 175 E 175 (310)
Q Consensus 175 e 175 (310)
+
T Consensus 425 ~ 425 (432)
T PRK10406 425 R 425 (432)
T ss_pred h
Confidence 3
No 158
>TIGR00898 2A0119 cation transport protein.
Probab=99.22 E-value=1.7e-10 Score=103.52 Aligned_cols=134 Identities=20% Similarity=0.116 Sum_probs=106.2
Q ss_pred HHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhH--HHHHHHHHHHhhcccccccchhhhhhhccccc
Q 021634 39 SLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNV--YMLIFGRLLLGVGVGFANQSVPLYLSEMAPAR 116 (310)
Q Consensus 39 ~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~ 116 (310)
+..+...++.++.+++.||+|||+.+.++.++.+++.++..+.++. +...+.-++.+++.+..++....+..|.+|++
T Consensus 363 ~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 442 (505)
T TIGR00898 363 ISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTV 442 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHH
Confidence 3445667788999999999999999999999888888777666543 44445556666767777788889999999999
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCc
Q 021634 117 YRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETP 177 (310)
Q Consensus 117 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~ 177 (310)
.|+.++++.+....+|.+++|.+.+ +.. .++...+++.++..++..+..+++||+.
T Consensus 443 ~r~~~~g~~~~~~~ig~~i~p~i~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~lpet~ 498 (505)
T TIGR00898 443 VRNLGVGVCSTMARVGSIISPFLVY-LGE----KWLFLPLVLFGGLALLAGILTLFLPETK 498 (505)
T ss_pred HHhhhHhHHHHHHHHHHHHHhHHHH-HHH----HHHhhHHHHHHHHHHHHHHHHHcCcCCC
Confidence 9999999999999999999999876 332 3466677777777777777777889874
No 159
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.21 E-value=2.6e-10 Score=99.99 Aligned_cols=124 Identities=13% Similarity=0.030 Sum_probs=92.3
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhh--cccc
Q 021634 23 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGV--GVGF 100 (310)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~--~~~~ 100 (310)
.++.|.++.+.+...+...++..++.++.|+++||+|||+.+..+.++..+..+.....++.....+.-++.|+ +...
T Consensus 258 ~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (426)
T PRK12307 258 LAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVG 337 (426)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhccc
Confidence 34568889999999999999999999999999999999999988887766665544332221112222223332 2222
Q ss_pred cccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccc
Q 021634 101 ANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQI 146 (310)
Q Consensus 101 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 146 (310)
..+..+.++.|.+|++.|++++++......+|..++|.+.+.+.+.
T Consensus 338 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~ 383 (426)
T PRK12307 338 VGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGIT 383 (426)
T ss_pred HhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHc
Confidence 3345667789999999999999999999999999999998877654
No 160
>PRK10504 putative transporter; Provisional
Probab=99.20 E-value=2.3e-10 Score=101.68 Aligned_cols=123 Identities=12% Similarity=-0.010 Sum_probs=101.2
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh---hhHHHHHHHHHHHhhccc
Q 021634 23 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA---VNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~ 99 (310)
+..+|.++.+.++......++..++.++.++++||+|||+++..+..+..++..+..+. .+.+.+.+.-++.|++.+
T Consensus 289 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 368 (471)
T PRK10504 289 QIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNS 368 (471)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHH
Confidence 34578899999999988888888999999999999999999998888777776655443 333444455677888888
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcc
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQ 145 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 145 (310)
...+....++.+..|+++|+.+.++.+....+|..+++.+++.+..
T Consensus 369 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~ 414 (471)
T PRK10504 369 TRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLG 414 (471)
T ss_pred HHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888999999999999999999999999999888888776543
No 161
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.20 E-value=1.5e-10 Score=99.13 Aligned_cols=121 Identities=13% Similarity=0.042 Sum_probs=108.8
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhh-HHHHHHHHHHHhhccccccc
Q 021634 25 YCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVN-VYMLIFGRLLLGVGVGFANQ 103 (310)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~r~l~G~~~~~~~~ 103 (310)
.++.++.+.+.+.+...++..++.++.+++.||+|||+.+..+..+..++.....+.++ .+.+.+..++.|++.+...+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 320 (365)
T TIGR00900 241 YLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINV 320 (365)
T ss_pred HhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 37889999999999999999999999999999999999999888877777777777764 78888889999999998889
Q ss_pred chhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcc
Q 021634 104 SVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQ 145 (310)
Q Consensus 104 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 145 (310)
....++.|..|+++|++..++.+....+|..+++.+++.+.+
T Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 321 PQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999876654
No 162
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.20 E-value=3.8e-10 Score=99.73 Aligned_cols=150 Identities=13% Similarity=0.050 Sum_probs=99.8
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhh--CchhHH-HHHHHHHHHHHHHhhh--hhhHHHHHHHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF--GRKPSV-LMGGAAFLAGSALGGA--AVNVYMLIFGRLLL 94 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--Grr~~~-~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~ 94 (310)
.+++++.|.+..+.++....+.++..++.++.|+++||+ |||+.. .....+..++.+.... ..+.+...++.++.
T Consensus 278 ~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (452)
T PRK11273 278 TYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVI 357 (452)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHH
Confidence 445666888999999999999999999999999999999 555432 2222333333322222 23444444445555
Q ss_pred hhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHH-HHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc
Q 021634 95 GVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGAL-AANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF 172 (310)
Q Consensus 95 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~ 172 (310)
|.+..........+..|.+|++.||+++++.+....+|.. .+|.+.+.+.+. .||+..|++.++.+++..+....
T Consensus 358 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~---~g~~~~f~~~~~~~~~~~~~~~~ 433 (452)
T PRK11273 358 GFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF---FGWDGGFMVMIGGSILAVILLIV 433 (452)
T ss_pred HHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHH---hcchHHHHHHHHHHHHHHHHHHH
Confidence 5543222223345677999999999999999887777754 468877766643 46999998877776666555443
No 163
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.19 E-value=6.9e-10 Score=88.49 Aligned_cols=154 Identities=18% Similarity=0.179 Sum_probs=114.5
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh-------hhHHHHHHHH
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA-------VNVYMLIFGR 91 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~~r 91 (310)
.|++++.+|+|.+|...+.+.-.+|..+ .++.|.+.|++|++.++.+|.+...+|..+...+ .++|.+.+..
T Consensus 25 S~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~ 103 (250)
T PF06813_consen 25 SPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFL 103 (250)
T ss_pred hHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHH
Confidence 3778899999999999999999999987 4899999999999999999999999998776543 3567777777
Q ss_pred HHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhh
Q 021634 92 LLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL 171 (310)
Q Consensus 92 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~ 171 (310)
++.|.+.+...+.......+.|| ++||++.++.....++++.+-..+...+... ..-+..+.....+.++.++..+
T Consensus 104 ~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~---~~~~fll~la~~~~~v~l~~~~ 179 (250)
T PF06813_consen 104 FLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD---DPSSFLLFLAVLPAVVCLVAMF 179 (250)
T ss_pred HHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC---ChHHHHHHHHHHHHHHHHHHhh
Confidence 77777766666666666667887 5799999999999999887766664433322 2233444444444445555555
Q ss_pred cccCCc
Q 021634 172 FLPETP 177 (310)
Q Consensus 172 ~~~es~ 177 (310)
++++.|
T Consensus 180 ~vr~~~ 185 (250)
T PF06813_consen 180 FVRPVP 185 (250)
T ss_pred heeccC
Confidence 554443
No 164
>PRK15075 citrate-proton symporter; Provisional
Probab=99.18 E-value=6.1e-10 Score=97.94 Aligned_cols=129 Identities=16% Similarity=0.043 Sum_probs=91.1
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHH-h---hhhhhHHHHHHHHHHHh
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSAL-G---GAAVNVYMLIFGRLLLG 95 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~-~---~~~~~~~~l~~~r~l~G 95 (310)
.++++.+|++..+.++......++..++.++.|+++||+|||+.+..+.++..+.... . ...+++.......++.|
T Consensus 263 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (434)
T PRK15075 263 TFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLS 342 (434)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH
Confidence 3345567899999999998999999999999999999999999887765544332211 1 11233434444455566
Q ss_pred hcccccccchhhhhhhcccccchhhhhhHHH-HHHHHHHHHHHHHHhhhcccCC
Q 021634 96 VGVGFANQSVPLYLSEMAPARYRGAINNGFQ-FSIGIGALAANFINYGTEQIKG 148 (310)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~ 148 (310)
++.+...+....++.|.+|++.|+...++.. .+..++..++|.+.+.+.+..+
T Consensus 343 ~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 343 FLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred HHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 6666666666788999999999999999854 4444556677888776665443
No 165
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.18 E-value=1.9e-09 Score=93.71 Aligned_cols=154 Identities=17% Similarity=0.191 Sum_probs=112.7
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh----hhH--HH---HHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA----VNV--YM---LIFG 90 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~----~~~--~~---l~~~ 90 (310)
..+-++-|++..+..+.+....+...+..+++..+.||+|||+.++.+..+..+..++.... ... |. .+++
T Consensus 294 t~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~ 373 (485)
T KOG0569|consen 294 TSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAA 373 (485)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 44666778999999999999999999999999999999999999999999988888766543 111 11 2233
Q ss_pred HHHHhhcccc-cccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHH
Q 021634 91 RLLLGVGVGF-ANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLG 169 (310)
Q Consensus 91 r~l~G~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~ 169 (310)
.++..++.+. .-|+.+-+.+|.+|++.|+.++++......++..+....-..+.+..+ = +.|+...+++++..+.
T Consensus 374 ~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g---~-~~filF~i~~~~~~i~ 449 (485)
T KOG0569|consen 374 IFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG---P-YVFILFVIPLAIFLIY 449 (485)
T ss_pred HHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---c-hhhHHHHHHHHHHHHH
Confidence 4444433333 356777889999999999999999888888887766665444444332 2 5666666666666555
Q ss_pred h-hcccCCc
Q 021634 170 A-LFLPETP 177 (310)
Q Consensus 170 ~-~~~~es~ 177 (310)
. ..+||+.
T Consensus 450 ~~~~lPETk 458 (485)
T KOG0569|consen 450 LYRYLPETK 458 (485)
T ss_pred HHHhCcccC
Confidence 4 4599984
No 166
>TIGR00895 2A0115 benzoate transport.
Probab=99.18 E-value=1.9e-10 Score=99.66 Aligned_cols=124 Identities=12% Similarity=0.068 Sum_probs=101.8
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
|.+.++++.++.+.+...+...++..++.++.|+++||+|||+.+....+.......+.....+.+...+..++.|++.+
T Consensus 274 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 353 (398)
T TIGR00895 274 PKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVN 353 (398)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 35567788999999999999999999999999999999999955444444333333333335666777788899999999
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhh
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGT 143 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 143 (310)
...+....++.|.+|+++|+++.++......+|..++|.+.+.+
T Consensus 354 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 354 GGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 88999999999999999999999999999999999999987643
No 167
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.17 E-value=4.9e-10 Score=99.65 Aligned_cols=145 Identities=15% Similarity=0.152 Sum_probs=126.8
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccc
Q 021634 23 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFAN 102 (310)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 102 (310)
.+++|.++...|++.+.+.+|..+|+++.+++.+|+++++.+..+.++.+++.+..+++++.+...+.-++.|++.....
T Consensus 246 ~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~ 325 (524)
T PF05977_consen 246 RDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIAN 325 (524)
T ss_pred HHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred cchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh
Q 021634 103 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA 170 (310)
Q Consensus 103 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~ 170 (310)
+...+.+.+..|++.|||.++++++....+..+|..+.+.+.+. .|-+..+.+.++..++..++.
T Consensus 326 ~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~---~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 326 SSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADH---FGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999888888888888877754 357777777666555444443
No 168
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.17 E-value=2.1e-09 Score=94.62 Aligned_cols=117 Identities=22% Similarity=0.243 Sum_probs=97.4
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHhhcccccccchhh
Q 021634 29 DSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA-VNVYMLIFGRLLLGVGVGFANQSVPL 107 (310)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~ 107 (310)
++.+.+++.++..++..++.+++++++||+|+|+++..+..+..++.+...+. ++.+.+.+..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677788888899999999999999999999999999988888877766554 45666777788889998888888889
Q ss_pred hhhhccc-------ccchhhhhhHHHHHHHHHHHHHHHHHhhhcc
Q 021634 108 YLSEMAP-------ARYRGAINNGFQFSIGIGALAANFINYGTEQ 145 (310)
Q Consensus 108 ~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 145 (310)
+++|..| ++.+|...++.+....+|..+++.+.+.+.+
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~ 379 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILG 379 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888865 4557899999999999999999888776654
No 169
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.15 E-value=1.4e-09 Score=94.05 Aligned_cols=139 Identities=12% Similarity=0.045 Sum_probs=114.1
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccccccc
Q 021634 24 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQ 103 (310)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 103 (310)
+|.|.++.+.+.+.+...++..+..++.|++.||+|+|+.+..+.....++.+..+.+++.+.+++..++.|++.+...+
T Consensus 233 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 312 (382)
T PRK11128 233 QAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHL 312 (382)
T ss_pred HHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999899999999999999999999999999998888888888889999999999999999888888
Q ss_pred chhhhhhhcccccchhhhhhHHH-HHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHH
Q 021634 104 SVPLYLSEMAPARYRGAINNGFQ-FSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILT 167 (310)
Q Consensus 104 ~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~ 167 (310)
....++.+. +++++++..+.+. ....+|..+++.+++.+.+.. ++ ..++..+++.++..
T Consensus 313 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~---g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 313 AAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL---GA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cH-HHHHHHHHHHHHHH
Confidence 888888886 5666788888876 556778888999988887643 45 35555555554443
No 170
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.14 E-value=6.4e-10 Score=97.76 Aligned_cols=148 Identities=18% Similarity=0.127 Sum_probs=101.4
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhh--Cc-hhHHHH---HHHHHHHHHHHhhhhhhHHHHHHHHHHH
Q 021634 21 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF--GR-KPSVLM---GGAAFLAGSALGGAAVNVYMLIFGRLLL 94 (310)
Q Consensus 21 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--Gr-r~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 94 (310)
.+.+++|++..+.+...+.+.++..++.++.|+++||+ ++ |+.... +.....++..... ..+.....+..+..
T Consensus 269 ~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 347 (434)
T PRK11663 269 YMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMP-FASYVMQAACFFTI 347 (434)
T ss_pred HHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcc-cccHHHHHHHHHHH
Confidence 45577899999999999999999999999999999999 33 332222 2121221212222 22333333344445
Q ss_pred hhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc
Q 021634 95 GVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF 172 (310)
Q Consensus 95 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~ 172 (310)
|++...........+.|.+|+++|++++++.+....+|..++|.+.+.+.+. .||+..|++.+++.++..+..+.
T Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~---~g~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 348 GFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEI---WHWTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred HHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHh---cccHHHHHHHHHHHHHHHHHHHH
Confidence 5433222223345678999999999999999999999999999997777653 56999998888887776655543
No 171
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.11 E-value=1.5e-09 Score=94.34 Aligned_cols=141 Identities=14% Similarity=0.146 Sum_probs=115.8
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccchh
Q 021634 27 KFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVP 106 (310)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 106 (310)
+.+..+.+.+.++..+...++.+..|++.||+|||+.+.++..+.++...+...+++.+.+++.+++.|++.........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566778888888899999999999999999999999999988888877777788888888899999998766666666
Q ss_pred hhhhhcccccchhhhhhH-HHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh
Q 021634 107 LYLSEMAPARYRGAINNG-FQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA 170 (310)
Q Consensus 107 ~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~ 170 (310)
.+..+..+++.++...+. .+....+|..+++.+++.+.+. .||+..|.+.+++.++..+..
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~---~G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDS---IGFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHh---cccHHHHHHHHHHHHHHHHHH
Confidence 777787888878776665 6778899999999998887754 369999998888777665544
No 172
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.10 E-value=7.1e-10 Score=109.09 Aligned_cols=143 Identities=13% Similarity=0.071 Sum_probs=119.0
Q ss_pred cccccccccchh-HHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcc
Q 021634 20 TKISNYCKFDSQ-LLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 20 ~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 98 (310)
..+.+++|.+.. +.+++.+...++.++++++.|+++||+++|+.+.++.++.+++.++..+..+.+.++++.++.|++.
T Consensus 257 ~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 336 (1146)
T PRK08633 257 AYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSA 336 (1146)
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 345667888988 9999999999999999999999999999999998888888888888888888888888899999999
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHH
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPAS 164 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~ 164 (310)
+...+...+++.+..|++.||+++++.+....+|.++++.++..+... ..++...+++.+.+.+
T Consensus 337 ~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~ 400 (1146)
T PRK08633 337 GLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGL--GLSPAGLFYLIALVTL 400 (1146)
T ss_pred HHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHh--ccCHHHHHHHHHHHHH
Confidence 988888899999999999999999999999999988877777655431 1345556655554443
No 173
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.10 E-value=4.2e-08 Score=89.40 Aligned_cols=150 Identities=15% Similarity=0.201 Sum_probs=118.4
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhh-CchhHHHHHHHHHHHHHHHhhhhhh--------HHHHHHHHH
Q 021634 22 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF-GRKPSVLMGGAAFLAGSALGGAAVN--------VYMLIFGRL 92 (310)
Q Consensus 22 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~~~~~~~~~~~~--------~~~l~~~r~ 92 (310)
+.+.+|.+.+....+...+....-+.++++|.++|++ ||++.+.++.++..++..+.+++.. ....+++-.
T Consensus 14 l~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLa 93 (654)
T TIGR00926 14 FLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLA 93 (654)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHH
Confidence 4456788999998898988888899999999999975 9999999999999999887766421 223556677
Q ss_pred HHhhcccccccchhhhhhhcccccc---hhhhhhHHHHHHHHHHHHHHHHHhhhcccC----CCchhHHHHHhhHHHHHH
Q 021634 93 LLGVGVGFANQSVPLYLSEMAPARY---RGAINNGFQFSIGIGALAANFINYGTEQIK----GGWGWRVSLALAAVPASI 165 (310)
Q Consensus 93 l~G~~~~~~~~~~~~~~~~~~~~~~---r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~wr~~~~~~~~~~~~ 165 (310)
+.++|.|+.-+...+...|.+++++ |-+...++..+.++|.++++.+...+.... ...+|...|.+.++..++
T Consensus 94 Lia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~i 173 (654)
T TIGR00926 94 LIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMIL 173 (654)
T ss_pred HHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHH
Confidence 7888889999999999999997643 566788888899999999888877665332 234699999988888777
Q ss_pred HHHHhh
Q 021634 166 LTLGAL 171 (310)
Q Consensus 166 ~~~~~~ 171 (310)
.++...
T Consensus 174 a~lvf~ 179 (654)
T TIGR00926 174 ALIVFM 179 (654)
T ss_pred HHHHHH
Confidence 665543
No 174
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.09 E-value=4e-09 Score=91.95 Aligned_cols=139 Identities=13% Similarity=0.044 Sum_probs=105.1
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHhh
Q 021634 22 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA-----VNVYMLIFGRLLLGV 96 (310)
Q Consensus 22 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~ 96 (310)
+.+++|.++.+.++......++..++.++.|+++||+|+|+.+.++.++..++..+.... .+.+.+.+.-++.|+
T Consensus 242 ~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~ 321 (406)
T PRK15402 242 LISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAF 321 (406)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHH
Confidence 456688999999988888888899999999999999999999988888777776665543 345666777888999
Q ss_pred cccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHH
Q 021634 97 GVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPAS 164 (310)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~ 164 (310)
+.+...+........ .++++||+..+.++....+|..+++.+++.+.+.. ++....+..++..+
T Consensus 322 g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~---~~~~~~~~~~~~~~ 385 (406)
T PRK15402 322 GIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGG---GNGLFNLFNLANGL 385 (406)
T ss_pred HHHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhcccCC---chHHHHHHHHHHHH
Confidence 888776666554443 34589999999999999999999999977765443 34443333333333
No 175
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.08 E-value=1.4e-09 Score=94.58 Aligned_cols=147 Identities=12% Similarity=0.024 Sum_probs=110.0
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHhhhHHHHh-hhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccccc
Q 021634 23 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTR-AFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFA 101 (310)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 101 (310)
.+|.+.++.+.+++.+...++...+..+.+++.| |++.++.+..+..+..++..+.+++++++.+.+..++.|++.+..
T Consensus 235 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~ 314 (400)
T PRK11646 235 VNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIA 314 (400)
T ss_pred HHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 3444447778888888877777666666666665 466677777788888888777778888887777788888888888
Q ss_pred ccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchh-HHHHHhhHHHHHHHHHH
Q 021634 102 NQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGW-RVSLALAAVPASILTLG 169 (310)
Q Consensus 102 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w-r~~~~~~~~~~~~~~~~ 169 (310)
.+....++.|..|+++||+.+++.+....+|..++|.+++.+.+..+.+++ ...++..++.+++..+.
T Consensus 315 ~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 315 EPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 888889999999999999999999999999999999999988765432232 34444445444444433
No 176
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.06 E-value=4.5e-09 Score=91.11 Aligned_cols=143 Identities=13% Similarity=0.009 Sum_probs=105.5
Q ss_pred ccccccchhHHHHHHHHHHH-HHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhh------hhhHHHHHHHHHHHh
Q 021634 23 SNYCKFDSQLLTSFTSSLYV-AGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA------AVNVYMLIFGRLLLG 95 (310)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~r~l~G 95 (310)
.+|.|.++++.+++.....+ ...++.++.|++.||+|+|+.+..+..+..+..+.... .++...+.....+.+
T Consensus 235 l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (390)
T TIGR02718 235 LVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGS 314 (390)
T ss_pred HHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHH
Confidence 34679999999999888764 66778899999999999999988877665333322211 123333444455566
Q ss_pred hcccccccchhhhhhhcccc-cchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHH
Q 021634 96 VGVGFANQSVPLYLSEMAPA-RYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTL 168 (310)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~ 168 (310)
++.+...+.....+.+..++ +++++.+++.+....+|..++|.+++.+.+. .||+..|++.+++.++..+
T Consensus 315 ~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~---~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 315 LITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDR---FGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HccHHHHHHHHHHHHHHHH
Confidence 66676667777777777766 7899999999999999999999999887754 3688888887766665443
No 177
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.06 E-value=4.1e-10 Score=99.68 Aligned_cols=153 Identities=16% Similarity=0.083 Sum_probs=136.4
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhC--chhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFG--RKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVG 97 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G--rr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 97 (310)
+...++.+.++++.+.+.++..+...++.++.|+++|+.. ++.+..++++..+++.+.++++++++.++..-.+.|++
T Consensus 322 ~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~ 401 (509)
T KOG2504|consen 322 PSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFC 401 (509)
T ss_pred HHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 4455588999999999999999999999999999999998 55666778888888888999999999999999999999
Q ss_pred ccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhccc
Q 021634 98 VGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLP 174 (310)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~ 174 (310)
.|.........+.|..+.++-+.+.|+...+.+++.+++|++++.+.+..+ +|...|+..++..++..+.+++.|
T Consensus 402 ~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg--~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 402 VGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITG--NYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccC--CeeeehhhcChHHHHHHHHHHHhH
Confidence 999888888899999999999999999999999999999999987776655 488899999988888887777766
No 178
>PRK09848 glucuronide transporter; Provisional
Probab=99.05 E-value=9.1e-09 Score=90.92 Aligned_cols=124 Identities=11% Similarity=0.040 Sum_probs=97.5
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh--hhHHHHHHHHHHHhhcc
Q 021634 21 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA--VNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 21 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~ 98 (310)
.+++.+|.++...++......++..++.+++++++||+|+|+.+.++.++..++.+...+. .+.+.+.+..++.|+|.
T Consensus 254 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~ 333 (448)
T PRK09848 254 YVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQ 333 (448)
T ss_pred eEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHH
Confidence 3455567666555555555567788899999999999999999999998888887766654 35666777788899999
Q ss_pred cccccchhhhhhhccccc-------chhhhhhHHHHHHHHHHHHHHHHHhhhc
Q 021634 99 GFANQSVPLYLSEMAPAR-------YRGAINNGFQFSIGIGALAANFINYGTE 144 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~~~~~~~~~~ 144 (310)
+...+...++.+|..|.+ ++|...++.+....+|..+++.+.+.+.
T Consensus 334 ~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l 386 (448)
T PRK09848 334 GVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFIL 386 (448)
T ss_pred HHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998888889998888754 3488889999999999988888876554
No 179
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.03 E-value=6.8e-09 Score=87.63 Aligned_cols=149 Identities=10% Similarity=0.052 Sum_probs=122.3
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHhhc
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA-AVNVYMLIFGRLLLGVG 97 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~r~l~G~~ 97 (310)
.|.+++..|.|.+..+++.-.+.++..+|..+.|+++|| +.|+.+.....+..+..+...+ .++.+...+.-++.|+.
T Consensus 235 ~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a 313 (394)
T COG2814 235 RPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFA 313 (394)
T ss_pred HHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 477888999999999999999999999999999999999 9999888887777777665554 45555666667777777
Q ss_pred ccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc
Q 021634 98 VGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF 172 (310)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~ 172 (310)
.+........-+++ ..|+.+..+.++.....++|..+|..+++.+.+. +|+....++.++..++..+..+.
T Consensus 314 ~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~---~g~~~~~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 314 FSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDA---LGYAATGWVGAALLLLALLLALL 384 (394)
T ss_pred hhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hchHHHHHHHHHHHHHHHHHHHH
Confidence 66666666666666 4468899999999999999999999999987764 67999999999888887766654
No 180
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.02 E-value=2.2e-09 Score=94.49 Aligned_cols=154 Identities=13% Similarity=0.034 Sum_probs=98.0
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHH---HHHHHhhh--hhhHHHHHHHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFL---AGSALGGA--AVNVYMLIFGRLLL 94 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~---~~~~~~~~--~~~~~~l~~~r~l~ 94 (310)
.++++..|.++.+.++..+...++..++.++.|+++||+|+++....+..... ++...... ..+.+.....-++.
T Consensus 276 ~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (438)
T TIGR00712 276 TYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVI 355 (438)
T ss_pred HHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 44555678899999999999999999999999999999975432222322211 11111111 12333333344455
Q ss_pred hhcccccccchhhhhhhcccccchhhhhhHHHHHHHHH-HHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh-hc
Q 021634 95 GVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIG-ALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LF 172 (310)
Q Consensus 95 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~ 172 (310)
|.+.............|.+|+++|+++.++.+....+| ..++|.+.+.+.+. .||...+++.....++..+.. .+
T Consensus 356 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~ 432 (438)
T TIGR00712 356 GFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF---FGWDGGFMVMIGGSILAVILLIVV 432 (438)
T ss_pred HHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHh---ccchHHHHHHHHHHHHHHHHHHHH
Confidence 54322222222345779999999999999998777666 46788887766653 358888887666665555444 44
Q ss_pred ccCC
Q 021634 173 LPET 176 (310)
Q Consensus 173 ~~es 176 (310)
+||.
T Consensus 433 ~~~~ 436 (438)
T TIGR00712 433 MIGE 436 (438)
T ss_pred Hhhc
Confidence 6654
No 181
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.01 E-value=5e-09 Score=90.61 Aligned_cols=147 Identities=7% Similarity=-0.004 Sum_probs=104.4
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhh-hhhhHHHHHHHHHHHhhcc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGG-AAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~r~l~G~~~ 98 (310)
+.+.+.+|.++++.+++.+...++..++.++.|++.||+|+|+.+..+..+..++.++.. ..++.+...+..++.+.+.
T Consensus 224 ~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~ 303 (382)
T PRK10091 224 PYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGL 303 (382)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 455566899999999999999999999999999999999999999988888777765544 3455555556666666654
Q ss_pred cccccchh-hhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh
Q 021634 99 GFANQSVP-LYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA 170 (310)
Q Consensus 99 ~~~~~~~~-~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~ 170 (310)
....+... ....+..+++.++... .+....+|..++|.+++.+.+.. .+|++.+.+.++..++.....
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~~--~~~~~~~~~~~~~~~~~~~~~ 372 (382)
T PRK10091 304 FALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLTLG--LAYNYVALPAALLSFAAMSSL 372 (382)
T ss_pred HhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHHcc--cCcchHHHHHHHHHHHHHHHH
Confidence 44333333 3344444555555443 35677889999999988776532 368888888766665554433
No 182
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.01 E-value=2.5e-09 Score=84.87 Aligned_cols=144 Identities=13% Similarity=0.028 Sum_probs=110.6
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHH-HHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 21 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAA-FLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 21 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
-.++.||+|+...+.+.+......++.+++.|.++||+|++...+.+..+ ..++-....+ +.+.=..+..+.|+..+
T Consensus 290 fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsys 367 (459)
T KOG4686|consen 290 FFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYS 367 (459)
T ss_pred HHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHH
Confidence 36788999999999999999999999999999999999999877665444 3333333333 33334556677888766
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHh-hHHHHHHH
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLAL-AAVPASIL 166 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~-~~~~~~~~ 166 (310)
..-...+..++...|+++.|++.+..++..++|-.+.+++++++.+..+.+.|--+|.+ .+..++..
T Consensus 368 llAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~s 435 (459)
T KOG4686|consen 368 LLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTS 435 (459)
T ss_pred HHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHH
Confidence 65555677788889999999999999999999999999999999887766667666655 33333333
No 183
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.00 E-value=3.4e-09 Score=94.55 Aligned_cols=124 Identities=10% Similarity=0.061 Sum_probs=105.5
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhh----hhhHHHHHHHHHHHhh
Q 021634 21 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA----AVNVYMLIFGRLLLGV 96 (310)
Q Consensus 21 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~r~l~G~ 96 (310)
.+++.+|.++.+.++......++..++.++.|++.||+|||+.+..+..+..++..+..+ ..+++.+....++.|+
T Consensus 281 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 360 (485)
T TIGR00711 281 YLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGF 360 (485)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHH
Confidence 455668999999999999999999999999999999999999999998888888776652 2345666777889999
Q ss_pred cccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhc
Q 021634 97 GVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE 144 (310)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~ 144 (310)
+.+...+.......+..|+++|+.+.++.+....+|..+++.+.+.+.
T Consensus 361 g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~ 408 (485)
T TIGR00711 361 GMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTIL 408 (485)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988887777777788899999999999999999999999988866554
No 184
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.00 E-value=1.5e-08 Score=88.00 Aligned_cols=143 Identities=10% Similarity=-0.022 Sum_probs=107.8
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
|.+.+++|.++++.+.......++..++.++.+++.||.+++..+....+......++....++.+.+.+..++.|++.+
T Consensus 241 p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~ 320 (394)
T PRK10213 241 PVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFA 320 (394)
T ss_pred HHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 44556789999999999999999999999999999999654443333333333334444456677777888899999988
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHH
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASIL 166 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~ 166 (310)
...+....++.+..| +++++..+.......+|..+++.+++.+.+. .|++..+...++..++.
T Consensus 321 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~---~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 321 LVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDN---IGLTSPLMLSGTLMLLT 383 (394)
T ss_pred hhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cChhhHHHHHHHHHHHH
Confidence 888888888888886 5567777777888889999999998888754 45777777766554443
No 185
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.00 E-value=9e-09 Score=89.63 Aligned_cols=147 Identities=12% Similarity=0.047 Sum_probs=101.1
Q ss_pred cccccccccchhHHHHHHHHHH-HHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHh---hhh-hhHHHHHHHH---
Q 021634 20 TKISNYCKFDSQLLTSFTSSLY-VAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALG---GAA-VNVYMLIFGR--- 91 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~---~~~-~~~~~l~~~r--- 91 (310)
+.+.+++|+++++.+++.+... ++..++.++.|++.||+|||+.+..+..+..+..+.. ++. ++.+.+++.-
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 313 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIE 313 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 4466778999999999987654 5688999999999999999998877777666554332 333 3555555444
Q ss_pred -HHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh
Q 021634 92 -LLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA 170 (310)
Q Consensus 92 -~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~ 170 (310)
+..|++.+...+....++.+.+|.+++ +..+...++|...++.+++.+.+. .||+..|.+.++++++..+..
T Consensus 314 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~---~G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 314 NLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEA---YGWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHH---hChHHHHHHHHHHHHHHHHHH
Confidence 345555666667777777777776655 444444556666555666666543 579999999888887766555
Q ss_pred hcc
Q 021634 171 LFL 173 (310)
Q Consensus 171 ~~~ 173 (310)
+..
T Consensus 387 ~~~ 389 (402)
T PRK11902 387 WLM 389 (402)
T ss_pred HHH
Confidence 443
No 186
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.99 E-value=4.5e-09 Score=93.97 Aligned_cols=125 Identities=14% Similarity=-0.055 Sum_probs=106.8
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhh---hhhHHHHHHHHHHHhh
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA---AVNVYMLIFGRLLLGV 96 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~ 96 (310)
.++++.+|.|+.+.+.......++..++.++.|++.||+|+|+.+..+.++..++.++... .++.+......++.|+
T Consensus 284 ~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~ 363 (495)
T PRK14995 284 QELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGF 363 (495)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Confidence 4566778999999999999999999999999999999999999998888888777665443 2455566677899999
Q ss_pred cccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhc
Q 021634 97 GVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE 144 (310)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~ 144 (310)
+.|...+.....+.+..|+++++.+.++.+....+|..+|+.+.+.+.
T Consensus 364 g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~ 411 (495)
T PRK14995 364 SAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLL 411 (495)
T ss_pred hHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888888888899999999999999999999999999988866553
No 187
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.99 E-value=2.8e-09 Score=89.31 Aligned_cols=148 Identities=18% Similarity=0.135 Sum_probs=110.7
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhh--CchhHHHH-HHHHHHHHHHHhhhhh--hHHHHHHHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF--GRKPSVLM-GGAAFLAGSALGGAAV--NVYMLIFGRLLL 94 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--Grr~~~~~-~~~~~~~~~~~~~~~~--~~~~l~~~r~l~ 94 (310)
.++.|..|.|..+.++..+.+-++...|++++|+++||. |||.+..+ .+++..++.+..-.++ |++...++-++.
T Consensus 277 ~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~i 356 (448)
T COG2271 277 LYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFII 356 (448)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHH
Confidence 456778899999999999999999999999999999996 77766544 4444444444444444 457778888999
Q ss_pred hhcccccccchhhhhhhcccccchhhhhhHHHHHHHH-HHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh
Q 021634 95 GVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGI-GALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA 170 (310)
Q Consensus 95 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~ 170 (310)
|+..-+..-.......|..|++--|.+.|+...+..+ |...+...-+.+. +.+||...|++..+.+++..+..
T Consensus 357 Gf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~---d~~gW~g~Fi~~~~~a~l~~lll 430 (448)
T COG2271 357 GFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIA---DTWGWDGGFIVLSIAALLAILLL 430 (448)
T ss_pred HHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeE---ecCCCcchHHHHHHHHHHHHHHH
Confidence 9876555566666789999999999999999988877 7766666644443 34789988887666666555444
No 188
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.99 E-value=2.9e-09 Score=92.92 Aligned_cols=135 Identities=11% Similarity=0.018 Sum_probs=89.7
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhH-HHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccc
Q 021634 26 CKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPS-VLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQS 104 (310)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 104 (310)
.+.+..+.+...+...++..++.++.|+++||++||+. .....++..++..+.....+......+-.+.+++.....+.
T Consensus 274 ~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 353 (412)
T TIGR02332 274 QGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAI 353 (412)
T ss_pred CCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhH
Confidence 46677888999999999999999999999999997764 33333333333322222222222222222223333223333
Q ss_pred hhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHH
Q 021634 105 VPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVP 162 (310)
Q Consensus 105 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~ 162 (310)
......|.+|+++|+.+.++.+....+|..++|.+.+.+.+..+ +|++.+++.++.
T Consensus 354 ~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g--~~~~~~~~~~~~ 409 (412)
T TIGR02332 354 FWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATG--SFNSGLWFVAAL 409 (412)
T ss_pred HHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCC--CCchhHHHHHHH
Confidence 44555788999999999999999999999999998666554332 488887766554
No 189
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.98 E-value=1.3e-08 Score=88.34 Aligned_cols=123 Identities=10% Similarity=-0.117 Sum_probs=100.4
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccc
Q 021634 21 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGF 100 (310)
Q Consensus 21 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 100 (310)
.+++.+|.++.+.+++.+...++..+++++.+++.||+++|+.+..+.. ..+.....++.++++...+..++.|++.+.
T Consensus 231 ~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~ 309 (393)
T PRK11195 231 WAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGF 309 (393)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhh
Confidence 4566789999999999999999999999999999999999988877753 344444455667777777778889998888
Q ss_pred cccchhhhhhhcccccc-hhhhhhHHHHHHHHHHHHHHHHHhhhc
Q 021634 101 ANQSVPLYLSEMAPARY-RGAINNGFQFSIGIGALAANFINYGTE 144 (310)
Q Consensus 101 ~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~~~~~~~ 144 (310)
..+...+.+.|..|++. +|++.++.+....+|..++..+...+.
T Consensus 310 ~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~ 354 (393)
T PRK11195 310 FVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLV 354 (393)
T ss_pred hhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 78778888888766554 799999999999999888888877554
No 190
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.97 E-value=8.3e-09 Score=85.82 Aligned_cols=134 Identities=25% Similarity=0.349 Sum_probs=109.9
Q ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhh--HHHHHHHHHHHhhcccccccchhhh
Q 021634 31 QLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVN--VYMLIFGRLLLGVGVGFANQSVPLY 108 (310)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~r~l~G~~~~~~~~~~~~~ 108 (310)
...++..+.+.++..+++++.|.++||+|||+.+..+.....++.+...+..+ .+.+++.|+..|++.+...+....+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 118 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASAL 118 (338)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 57899999999999999999999999999998888888765666666666665 8889999999999999899999999
Q ss_pred hhhcccc-cchhhhhhHHHH-HHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHH
Q 021634 109 LSEMAPA-RYRGAINNGFQF-SIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASI 165 (310)
Q Consensus 109 ~~~~~~~-~~r~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~ 165 (310)
+.|+.|+ ++|+...+.... ...+|..+++.++..+... ...+||..+.........
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 119 LSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA-LLWGWRAAFLLAALLGLL 176 (338)
T ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcchHHHHHHHHHHHHH
Confidence 9999987 678888888887 5778888888777666554 445799977666555543
No 191
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.97 E-value=2.1e-08 Score=86.69 Aligned_cols=118 Identities=16% Similarity=0.203 Sum_probs=92.7
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHhh
Q 021634 22 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA-----VNVYMLIFGRLLLGV 96 (310)
Q Consensus 22 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~ 96 (310)
+.+++|.++.+.+++.+...++..++.++.|++.||+|||+.+..+..+..++.++.... ++...+....++.|+
T Consensus 233 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 312 (385)
T TIGR00710 233 YIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGI 312 (385)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 455788999999999999999999999999999999999999988877777776655443 233445556778888
Q ss_pred cccccccchhhhhhhcccccchhhhhhHHHHHHH-HHHHHHHHHH
Q 021634 97 GVGFANQSVPLYLSEMAPARYRGAINNGFQFSIG-IGALAANFIN 140 (310)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~-~g~~~~~~~~ 140 (310)
+.+...+....+..|..| ++|+++.++.+.... .|.+.++.++
T Consensus 313 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 313 GNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888888876 679999998876654 4555555554
No 192
>PRK10054 putative transporter; Provisional
Probab=98.97 E-value=7.4e-09 Score=89.91 Aligned_cols=150 Identities=11% Similarity=0.030 Sum_probs=113.3
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHhhcccccc
Q 021634 24 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA-VNVYMLIFGRLLLGVGVGFAN 102 (310)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~ 102 (310)
++.+.+....+...+...+.....+++.|.+.||+++|+.+..+..+..++.....++ ++.+.+.+..++.|++.+...
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYA 316 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHH
Confidence 3456667777888888777777888899999999999999999988888877766654 567777778899999988778
Q ss_pred cchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc-ccCCc
Q 021634 103 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF-LPETP 177 (310)
Q Consensus 103 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~-~~es~ 177 (310)
+....++.+..|++.|++..+..+ ...+|..++|.+++.+.+.. +....|++.+....+.++..+. ..|.|
T Consensus 317 p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (395)
T PRK10054 317 PGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTL---PPWSLFVILALAIVAAWLLMLKGMRARP 388 (395)
T ss_pred hhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHc---ChhhHHHHHHHHHHHHHHHHHhccccCc
Confidence 888889999999999999888655 45578999999988877643 4666666655555544444433 44443
No 193
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.96 E-value=6.5e-09 Score=88.95 Aligned_cols=126 Identities=16% Similarity=-0.004 Sum_probs=97.2
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhh-CchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccc
Q 021634 22 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF-GRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGF 100 (310)
Q Consensus 22 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 100 (310)
..++.|.+..+.+.+.+...++..+++++.|+++||+ +||+.+..+..+..++.+...+.++..... .-++.|++.+.
T Consensus 223 ~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~ 301 (355)
T TIGR00896 223 ILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQGG 301 (355)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhhhh
Confidence 3345788999999999999999999999999999999 567777777777777776666654433222 34678898888
Q ss_pred cccchhhhhhhccc-ccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCC
Q 021634 101 ANQSVPLYLSEMAP-ARYRGAINNGFQFSIGIGALAANFINYGTEQIKG 148 (310)
Q Consensus 101 ~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 148 (310)
..+.....+.+..+ +++++...++.+....+|..++|.+.+.+.+..+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 302 AFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 88877776665554 5667888898888888888899988887776544
No 194
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.96 E-value=3.4e-09 Score=90.68 Aligned_cols=107 Identities=10% Similarity=0.062 Sum_probs=89.6
Q ss_pred cccccchhHHHHHHHHHH-HHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh-----------hhHHHHHHHH
Q 021634 24 NYCKFDSQLLTSFTSSLY-VAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA-----------VNVYMLIFGR 91 (310)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~r 91 (310)
+++|.++++.+.+.++.. ++..++.+++|++.||+|||+.+..+.++..++.....+. ++.+.+..+.
T Consensus 237 ~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (356)
T TIGR00901 237 LDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTI 316 (356)
T ss_pred HHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHH
Confidence 348899999998888766 5778999999999999999999888888877766644432 3456777788
Q ss_pred HHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHH
Q 021634 92 LLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIG 130 (310)
Q Consensus 92 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 130 (310)
++.+++.+...+...+++.|.+|+++||+.+++.+...+
T Consensus 317 ~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 317 TLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 999999999999999999999999999999999877654
No 195
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.95 E-value=3.5e-09 Score=87.06 Aligned_cols=131 Identities=14% Similarity=0.079 Sum_probs=99.9
Q ss_pred HHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccchhhhhhhcccccchhhh
Q 021634 42 VAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAI 121 (310)
Q Consensus 42 ~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~ 121 (310)
+.-..|.++.+++.||+|||+++..+.++++++.++...+.+-....+.-+..-++.++.+.+.+.|..|.+|.+.|+..
T Consensus 392 laefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatg 471 (528)
T KOG0253|consen 392 LAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATG 471 (528)
T ss_pred HhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcc
Confidence 45678889999999999999999999999999999887776544444444444455566677889999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCc
Q 021634 122 NNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETP 177 (310)
Q Consensus 122 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~ 177 (310)
.|..+...-+|+++.|.++..... +-..+..+.+...++..++..++|=.+
T Consensus 472 vGtcSsmaRIggI~~p~iA~~~e~-----s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 472 VGTCSSMARIGGIFSPVIAMRAEL-----STSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred hhhhhhHHhhhhhhhhHHHHHhcc-----ceeehHHHHHHHHHHHHHHheeeeecc
Confidence 999999999999999999832221 122344555666666667777776433
No 196
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.93 E-value=7.9e-09 Score=91.52 Aligned_cols=152 Identities=8% Similarity=-0.020 Sum_probs=119.3
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhh----------hhhHHHHHHHHHH
Q 021634 24 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA----------AVNVYMLIFGRLL 93 (310)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~----------~~~~~~l~~~r~l 93 (310)
+++|.++.+.|.+.....++.+++....+++.+|++.|+++.++.++.+++...... .++.+.+....++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 578999999999999999999999999999999999999999999998888755321 1333445556788
Q ss_pred HhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCC----CchhHHHH-HhhHHHHHHHHH
Q 021634 94 LGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKG----GWGWRVSL-ALAAVPASILTL 168 (310)
Q Consensus 94 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~~~wr~~~-~~~~~~~~~~~~ 168 (310)
.+++.+........++.+..|++.+|...++.+...++|..+++.+++.+.+..+ +++.++.. .+..+..++...
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~ 440 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLP 440 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHH
Confidence 8888888888999999999999999999999999999999999998887776543 22333333 234444444444
Q ss_pred HhhcccC
Q 021634 169 GALFLPE 175 (310)
Q Consensus 169 ~~~~~~e 175 (310)
..+++|+
T Consensus 441 ~~~llP~ 447 (468)
T TIGR00788 441 LLHLLPR 447 (468)
T ss_pred HHHhCCC
Confidence 4457886
No 197
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.92 E-value=8.3e-09 Score=101.48 Aligned_cols=141 Identities=14% Similarity=0.000 Sum_probs=112.2
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh------------------
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA------------------ 81 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~------------------ 81 (310)
.++.+.+|.++.+.+++.+.+.++..+++++.|+++|+.++++.+..+.++..++.+...+.
T Consensus 250 ~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 329 (1140)
T PRK06814 250 LLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFL 329 (1140)
T ss_pred HHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhh
Confidence 44556689999999999999999999999999999998887776666666655555443332
Q ss_pred --hhHHHHHHHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhh
Q 021634 82 --VNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALA 159 (310)
Q Consensus 82 --~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~ 159 (310)
.+.+.+++..++.|++.+...+...+++.+..|++.||+++++.+....+|..+++.+.+.+.... .++...+++.
T Consensus 330 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~--~~~~~~~~~~ 407 (1140)
T PRK06814 330 SKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALG--FSIPWIILFI 407 (1140)
T ss_pred cccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhc--cCHHHHHHHH
Confidence 667778888899999999988899999999999999999999999999999999988877665321 2455555554
Q ss_pred HHH
Q 021634 160 AVP 162 (310)
Q Consensus 160 ~~~ 162 (310)
++.
T Consensus 408 ~~~ 410 (1140)
T PRK06814 408 ALA 410 (1140)
T ss_pred HHH
Confidence 443
No 198
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.91 E-value=1.3e-08 Score=86.78 Aligned_cols=116 Identities=20% Similarity=0.310 Sum_probs=101.1
Q ss_pred cccccccc-hhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhh---hHHHHHHHHHHHhhc
Q 021634 22 ISNYCKFD-SQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV---NVYMLIFGRLLLGVG 97 (310)
Q Consensus 22 i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~ 97 (310)
+.+++|.+ ..+.+...+...++..++.++.|+++||+|+|+..........++.+...... +....++.-++.|++
T Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 312 (352)
T PF07690_consen 233 LQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFG 312 (352)
T ss_dssp CCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHH
T ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 57888889 89999999999999999999999999999998888877777777766655443 456666778889999
Q ss_pred ccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHH
Q 021634 98 VGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAAN 137 (310)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 137 (310)
.+...+....++.|..|+++|+++.++.+....+|..++|
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 313 FGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999999999999999999999999999999999998886
No 199
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.91 E-value=2.1e-08 Score=89.05 Aligned_cols=154 Identities=16% Similarity=0.075 Sum_probs=101.5
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhH--------HHHHHHHH--HHHHHHhhh-hhhHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPS--------VLMGGAAF--LAGSALGGA-AVNVYMLI 88 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~--------~~~~~~~~--~~~~~~~~~-~~~~~~l~ 88 (310)
.++.+++|.+..+.+++.++..++..++.++.|+++||+++|+. +..+.... .+..+.... ..+....+
T Consensus 286 ~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (465)
T TIGR00894 286 TFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTI 365 (465)
T ss_pred HHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHH
Confidence 34566788999999999999999999999999999999875421 11111111 111111111 22333334
Q ss_pred HHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHH
Q 021634 89 FGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTL 168 (310)
Q Consensus 89 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~ 168 (310)
+.-.+.+.+.+...+.......|..| +.+|.+.++.+....+|..++|.+.+.+.+.....+|+..|.+.++..++..+
T Consensus 366 ~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i 444 (465)
T TIGR00894 366 IILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVI 444 (465)
T ss_pred HHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHH
Confidence 44445555444444444455556665 48999999999999999999998877665433223599999988877777666
Q ss_pred Hhhccc
Q 021634 169 GALFLP 174 (310)
Q Consensus 169 ~~~~~~ 174 (310)
...+.+
T Consensus 445 ~~~~~~ 450 (465)
T TIGR00894 445 FYLIFG 450 (465)
T ss_pred Heeeee
Confidence 655543
No 200
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.90 E-value=3.9e-08 Score=85.33 Aligned_cols=116 Identities=14% Similarity=0.145 Sum_probs=79.9
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccccc
Q 021634 22 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFA 101 (310)
Q Consensus 22 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 101 (310)
.++++|.++.+.+.+.+...++..++.++.+++.||+|||+.+..+..+..++.+...+.++.+.....-.+.+.+.+..
T Consensus 230 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 309 (392)
T PRK10473 230 LMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVG 309 (392)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999888888887777665554444444444444333
Q ss_pred ccchhhhhhhcccccch-hhhhhHHHHHHHHHHHHHHHH
Q 021634 102 NQSVPLYLSEMAPARYR-GAINNGFQFSIGIGALAANFI 139 (310)
Q Consensus 102 ~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~g~~~~~~~ 139 (310)
.+. ....+..|.++| +.+.+....+..+|..+++.+
T Consensus 310 ~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~l 346 (392)
T PRK10473 310 FGV--AMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWL 346 (392)
T ss_pred hHH--HHHHHhccCcccccHHHHHHHHHHHHHHHHHHHH
Confidence 322 333455555555 444444444445555554444
No 201
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.89 E-value=1.2e-08 Score=85.52 Aligned_cols=150 Identities=13% Similarity=0.043 Sum_probs=115.1
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh-------hhHHHHHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA-------VNVYMLIFGRL 92 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~~r~ 92 (310)
.+++++|+.++.+.+.....+.+...+..+.+|+++||+|.++++........++..+.+.. .+.....+.-+
T Consensus 243 ~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 322 (417)
T COG2223 243 MYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFL 322 (417)
T ss_pred HHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHH
Confidence 45677899999999999999999999999999999999999999998888888887776655 34444444445
Q ss_pred HHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc
Q 021634 93 LLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF 172 (310)
Q Consensus 93 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~ 172 (310)
..+++.|.....+..++..++| ++-|.+.++.....++|....|..-+...+..+ .+...|++...+.++..+..+.
T Consensus 323 ~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg--~~~~~f~~~~~~~~~a~v~~~~ 399 (417)
T COG2223 323 ALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTG--SYTGAFMLLLAFYLVALVLTWA 399 (417)
T ss_pred HHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555555566666777775 477888999999999998777777555555444 5888888888887777766544
No 202
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.89 E-value=6.9e-09 Score=89.23 Aligned_cols=133 Identities=17% Similarity=0.110 Sum_probs=95.5
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhC-chhH-HHHHHHH-HHHHHHHhhh--hhhHHHHHHHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFG-RKPS-VLMGGAA-FLAGSALGGA--AVNVYMLIFGRLLL 94 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-rr~~-~~~~~~~-~~~~~~~~~~--~~~~~~l~~~r~l~ 94 (310)
..+.+++|.++.+.+...+...++..++.++.|+++||.+ ||+. +...... ..++...... ..+.....+..++.
T Consensus 241 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (379)
T TIGR00881 241 LYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFAL 320 (379)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH
Confidence 3455678899999999999999999999999999999864 3332 2222211 2222222222 23445555666777
Q ss_pred hhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHH
Q 021634 95 GVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVS 155 (310)
Q Consensus 95 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~ 155 (310)
|.+.....+....+..|..|+++|+++.++.+....+|..+++.+.+.+.+. .||++.
T Consensus 321 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~---~g~~~~ 378 (379)
T TIGR00881 321 GFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADG---FGWAGA 378 (379)
T ss_pred HHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHh---hccccc
Confidence 7665555566677889999999999999999999999999999998877653 457654
No 203
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.89 E-value=5.6e-08 Score=83.98 Aligned_cols=149 Identities=18% Similarity=0.238 Sum_probs=116.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh-hhHHHHHH----HHHHHhhcccccc
Q 021634 28 FDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA-VNVYMLIF----GRLLLGVGVGFAN 102 (310)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~-~~~~~l~~----~r~l~G~~~~~~~ 102 (310)
.+.+..+.+.++..+.-.+.-...+++..|+|.|+++.++.+..++=..+.+.. ++.+...+ ...+.|+..+..+
T Consensus 240 ~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~ 319 (400)
T PF03825_consen 240 YSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFH 319 (400)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHH
Confidence 666777777777777778888999999999999999999999988877777766 44444333 3556999999999
Q ss_pred cchhhhhhhcccccchhhhhhHHHH-HHHHHHHHHHHHHhhhcccCC---CchhHHHHHhhHHHHHHHHHHh-hcccCC
Q 021634 103 QSVPLYLSEMAPARYRGAINNGFQF-SIGIGALAANFINYGTEQIKG---GWGWRVSLALAAVPASILTLGA-LFLPET 176 (310)
Q Consensus 103 ~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~---~~~wr~~~~~~~~~~~~~~~~~-~~~~es 176 (310)
.....++.+..|++.|+++.++++. ..++|..++..+++.+.+..+ .+.|...+.+.++..++..++. ++++|+
T Consensus 320 ~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 320 AASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 9999999999999999999999875 578999999999998876543 2346666666666666555544 335554
No 204
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.88 E-value=4.9e-08 Score=81.75 Aligned_cols=130 Identities=11% Similarity=0.052 Sum_probs=100.1
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccc
Q 021634 25 YCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQS 104 (310)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 104 (310)
.+|+++++.+...+.+..+.++|.++.++++||+|+|+.+.++..+..++.++....++... ..+-++.|++.+..+|.
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P~ 250 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSIMFPT 250 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999988888888777765555444333 23556889999999999
Q ss_pred hhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhH
Q 021634 105 VPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAA 160 (310)
Q Consensus 105 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~ 160 (310)
..+...+..|++ .+.+.++. ....+|..+.|.+-+.+.+. .+.+..+++..
T Consensus 251 ~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~---~g~~~a~~v~~ 301 (310)
T TIGR01272 251 IFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADC---LGIQLAFALPV 301 (310)
T ss_pred HHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHh---ccchHHHHHHH
Confidence 998888887653 45556665 45668888899887766653 34667766433
No 205
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.86 E-value=5.7e-08 Score=83.38 Aligned_cols=143 Identities=13% Similarity=0.058 Sum_probs=93.0
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCc---hhHHHH-HHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccc
Q 021634 24 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGR---KPSVLM-GGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr---r~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
++.+.+.+ .+...++..+...++ .++++||..| |+.... ..++..+.....+...+....++.-.+.|++..
T Consensus 220 ~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~ 295 (368)
T TIGR00903 220 RPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLML 295 (368)
T ss_pred HHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhh
Confidence 34456654 455555555555555 4677777654 343332 333334444444444444444555566777777
Q ss_pred ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccC
Q 021634 100 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPE 175 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~e 175 (310)
..++....+.+|.+|++.|+++.++.+....+|..++|.+.+.+.. +-+..|.+.+++.++..+...++++
T Consensus 296 ~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~-----~~~~~f~~~~~~~~i~~~~~~~~~~ 366 (368)
T TIGR00903 296 PAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS-----SAEAYFTFLAILITIAFAIALLLPN 366 (368)
T ss_pred hhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc-----CHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 7777788899999999999999999999999999888888665542 4566777777777766655544454
No 206
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.85 E-value=1.3e-08 Score=88.98 Aligned_cols=153 Identities=16% Similarity=0.156 Sum_probs=111.2
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhC-----chhHHHHHHHHHHHHHHHhhhh----hhHHHHHH
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFG-----RKPSVLMGGAAFLAGSALGGAA----VNVYMLIF 89 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-----rr~~~~~~~~~~~~~~~~~~~~----~~~~~l~~ 89 (310)
.+.+.+++|+++++.....++..+... ..++.|.++|-+- ||+-++++.++..++....+.. .+.....+
T Consensus 13 ~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~ 91 (433)
T PF03092_consen 13 YPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVV 91 (433)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHH
Confidence 466788999999999888777666554 4688899999762 5555566776665555544432 34556666
Q ss_pred HHHHHhhcccccccchhhhhhhccc--ccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHH
Q 021634 90 GRLLLGVGVGFANQSVPLYLSEMAP--ARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILT 167 (310)
Q Consensus 90 ~r~l~G~~~~~~~~~~~~~~~~~~~--~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~ 167 (310)
.-++..+|......+.-+++.|... ++.||...+.......+|.+++..+++.+.+. .+++..|.+.+++.++..
T Consensus 92 ~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~---~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 92 LLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDS---FGPQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhc---CCCeEEehHHHHHHHHHH
Confidence 6777888888888888889999874 33478888888899999999999888776654 357888888777766665
Q ss_pred HHhhcccC
Q 021634 168 LGALFLPE 175 (310)
Q Consensus 168 ~~~~~~~e 175 (310)
+..++++|
T Consensus 169 ~~~~~~~~ 176 (433)
T PF03092_consen 169 IVALFLLE 176 (433)
T ss_pred HHHHHhhh
Confidence 55555433
No 207
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.85 E-value=1.3e-07 Score=84.07 Aligned_cols=117 Identities=13% Similarity=0.095 Sum_probs=89.5
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhh-----hhhHHHHHHHHHHHhhccccccc
Q 021634 29 DSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA-----AVNVYMLIFGRLLLGVGVGFANQ 103 (310)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~ 103 (310)
+++..+.+.+...++..++.+++++++||+|+|+.+..+..+.+++.+.... ..+.+.+++.-++.|++.+...+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~ 343 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV 343 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 4566677777777888999999999999999999998888776666554332 34566667777888998888888
Q ss_pred chhhhhhhcccc-------cchhhhhhHHHHHHHHHHHHHHHHHhhhcc
Q 021634 104 SVPLYLSEMAPA-------RYRGAINNGFQFSIGIGALAANFINYGTEQ 145 (310)
Q Consensus 104 ~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 145 (310)
...++++|..+. +..|...+......-+|..+++.+.+.+..
T Consensus 344 ~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~ 392 (473)
T PRK10429 344 LQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLG 392 (473)
T ss_pred HHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999998662 223557888888888888888777665543
No 208
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.83 E-value=1.6e-07 Score=80.92 Aligned_cols=119 Identities=13% Similarity=0.099 Sum_probs=83.7
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhh---h-hhhHHHHHHHHHHHhhc
Q 021634 22 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGG---A-AVNVYMLIFGRLLLGVG 97 (310)
Q Consensus 22 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~---~-~~~~~~l~~~r~l~G~~ 97 (310)
..+++|.++.+.++..+...++..++.++.|++.||+|||+.+..+..+..+..+... . ..+++...++-.+.+.+
T Consensus 221 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (377)
T PRK11102 221 YIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGC 300 (377)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 3456789999999999999999999999999999999999999888776544433222 1 22444444444444444
Q ss_pred ccccccchhhhhhhcccccchhhhhhHHHHH-HHHHHHHHHHHHh
Q 021634 98 VGFANQSVPLYLSEMAPARYRGAINNGFQFS-IGIGALAANFINY 141 (310)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~~~~ 141 (310)
.+........++.|..| ++|+++.+..... ..+|..+++.++.
T Consensus 301 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 301 VSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45555555666777765 7899988886543 5567777776654
No 209
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.81 E-value=5.3e-06 Score=72.68 Aligned_cols=116 Identities=6% Similarity=-0.009 Sum_probs=85.6
Q ss_pred chhHHHHHHHHHHHHHHHH-HhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh----h---------------------
Q 021634 29 DSQLLTSFTSSLYVAGLVA-SFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA----V--------------------- 82 (310)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~-~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~----~--------------------- 82 (310)
..+...++.+...+...+. .++.+++++|++|++++-.....+.....++++. +
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~ 120 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFM 120 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence 4467889999888877666 8999999999999998877666666555554433 1
Q ss_pred ------hHHHHHHHHHHHhhccccccc-chhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhc
Q 021634 83 ------NVYMLIFGRLLLGVGVGFANQ-SVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE 144 (310)
Q Consensus 83 ------~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~ 144 (310)
+.|...+..+...+......+ .-+.+++|.++.++-.|..+++..+.++|.++++.+..++.
T Consensus 121 ~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 121 GFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122222333344444444444 67889999999999999999999999999999998877765
No 210
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.80 E-value=9.9e-08 Score=81.50 Aligned_cols=147 Identities=16% Similarity=0.155 Sum_probs=121.0
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccchh
Q 021634 27 KFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVP 106 (310)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 106 (310)
+.++...|.+.+..-+.-++.-.+..++.+|+|.|+.++++..+..+=-.+++++++.+.+.+.+.+.|+-.+.......
T Consensus 255 ~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~f 334 (412)
T PF01306_consen 255 GQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAF 334 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 44667789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccccchhhhhhH-HHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc-ccCC
Q 021634 107 LYLSEMAPARYRGAINNG-FQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF-LPET 176 (310)
Q Consensus 107 ~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~-~~es 176 (310)
.|+++.+|+|..++...+ .+....+|..+.+.+++.+.+. .|.+..|++.+.+.+...+...+ ++++
T Consensus 335 kYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~---~G~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 335 KYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDR---IGFQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhh---cCcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 999999998887777776 4678888988888888877753 57888888877777666655544 5443
No 211
>PRK09669 putative symporter YagG; Provisional
Probab=98.77 E-value=6.9e-07 Score=78.93 Aligned_cols=116 Identities=18% Similarity=0.146 Sum_probs=86.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhh--hhhHHHHHHHHHHHhhcccccccchhh
Q 021634 30 SQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA--AVNVYMLIFGRLLLGVGVGFANQSVPL 107 (310)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~ 107 (310)
++..+.+.....+...++.+++++++||+|+|+.+..+.++..++.....+ .++.+.+++..++.|++.+...+...+
T Consensus 263 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~a 342 (444)
T PRK09669 263 PDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWS 342 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455566667777889999999999999999998887766654432222 356777778888999999999999999
Q ss_pred hhhhccccc-------chhhhhhHHHHHHHHHHHHHHHHHhhhcc
Q 021634 108 YLSEMAPAR-------YRGAINNGFQFSIGIGALAANFINYGTEQ 145 (310)
Q Consensus 108 ~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 145 (310)
+++|..+.+ ..|...+..+....+|..+++.+++.+.+
T Consensus 343 m~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~ 387 (444)
T PRK09669 343 MFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILA 387 (444)
T ss_pred HHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988632 23556778877888888888887776554
No 212
>PRK10133 L-fucose transporter; Provisional
Probab=98.77 E-value=1.4e-07 Score=83.04 Aligned_cols=136 Identities=7% Similarity=-0.064 Sum_probs=102.1
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccc
Q 021634 23 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFAN 102 (310)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 102 (310)
++.+|+++.+.++....+.++..++.++.+++.||+|||+++..+.++..++..+..+.++.. .+..-.+.|++.+..+
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~ 365 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQY 365 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHH
Confidence 567899999999999999999999999999999999999999888877776666655555432 2445678899999999
Q ss_pred cchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCch-hHHHHHhhHHHHH
Q 021634 103 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWG-WRVSLALAAVPAS 164 (310)
Q Consensus 103 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-wr~~~~~~~~~~~ 164 (310)
|...+...|..|+ +.+.+.++.... .+|..++|.+.+.+.+. .| -|..|++..+..+
T Consensus 366 P~~~s~a~~~~~~-~~~~as~l~~~~-~~g~~~~~~i~G~l~~~---~g~~~~~~~v~~~~~~ 423 (438)
T PRK10133 366 PTIFSLGIKNLGQ-DTKYGSSFIVMT-IIGGGIVTPVMGFVSDA---AGNIPTAELIPALCFA 423 (438)
T ss_pred HHHHHHHHcccch-hhccchhHHhHH-hccchHHHHHHHHHHHh---ccchHHHHHHHHHHHH
Confidence 9999999998765 456666766543 35666666666656543 23 5666665444433
No 213
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.74 E-value=2.1e-07 Score=81.31 Aligned_cols=134 Identities=13% Similarity=-0.052 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhh--hh----hhHHHHHHHHHHHhhcccccccchhhhhh
Q 021634 37 TSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGG--AA----VNVYMLIFGRLLLGVGVGFANQSVPLYLS 110 (310)
Q Consensus 37 ~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~--~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~~~ 110 (310)
..+..+...+..+++|+++||+|+|+++.++.+...++..... .. .+++.+.+.-+...++.|........++.
T Consensus 292 ~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip 371 (462)
T PRK15034 292 AFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIA 371 (462)
T ss_pred HHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhH
Confidence 4445677788899999999999999999988887777664322 11 24566666655655666777777788888
Q ss_pred hcccc---------------------cchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHH
Q 021634 111 EMAPA---------------------RYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLG 169 (310)
Q Consensus 111 ~~~~~---------------------~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~ 169 (310)
+++|+ ++-|.+.|+......+|+.+.|.+-+...+..+ ++...|+...+..+++.+.
T Consensus 372 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g--~~~~~~~~~~~~~~~~~~~ 449 (462)
T PRK15034 372 VIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTG--SPVGAMKVFLIFYIVCVLL 449 (462)
T ss_pred HHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcC--CcHHHHHHHHHHHHHHHHH
Confidence 88874 145677888888888888888866444444333 4777777777776666655
Q ss_pred hhc
Q 021634 170 ALF 172 (310)
Q Consensus 170 ~~~ 172 (310)
.++
T Consensus 450 ~w~ 452 (462)
T PRK15034 450 TWL 452 (462)
T ss_pred HHH
Confidence 544
No 214
>PRK11043 putative transporter; Provisional
Probab=98.73 E-value=3.2e-07 Score=79.87 Aligned_cols=125 Identities=10% Similarity=-0.063 Sum_probs=92.5
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHh---hh--hhhHHHHHHHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALG---GA--AVNVYMLIFGRLLL 94 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~---~~--~~~~~~l~~~r~l~ 94 (310)
|.+.+++|.++.+.++......++..++.++.+++.||+|+|+.+........++.+.. .. .++.+.+++...+.
T Consensus 227 p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (401)
T PRK11043 227 PFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVM 306 (401)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHH
Confidence 34456688999999998888888999999999999999999987665555544443322 11 34455555666777
Q ss_pred hhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcc
Q 021634 95 GVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQ 145 (310)
Q Consensus 95 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 145 (310)
|++.+..++.......|..| ++|+++.++.+.....+...++.+.+.+.+
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 307 AAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred HHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 88888888887777777775 679999999998877777777777665543
No 215
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.71 E-value=3.4e-07 Score=80.48 Aligned_cols=115 Identities=21% Similarity=0.153 Sum_probs=99.5
Q ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhh--hHHHHHHHHHHHhhcccccccchhhh
Q 021634 31 QLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV--NVYMLIFGRLLLGVGVGFANQSVPLY 108 (310)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~ 108 (310)
+..+.+..+..++..++.+++++++||+|+|+.+..+..+.+++.++..+.+ +.+.+++.-++.|++.+..+....++
T Consensus 260 ~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~ 339 (428)
T PF13347_consen 260 GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAM 339 (428)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccc
Confidence 5678888899999999999999999999999999999999999999888776 89999999999999999999999999
Q ss_pred hhhccccc-------chhhhhhHHHHHHHHHHHHHHHHHhhhcc
Q 021634 109 LSEMAPAR-------YRGAINNGFQFSIGIGALAANFINYGTEQ 145 (310)
Q Consensus 109 ~~~~~~~~-------~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 145 (310)
++|..+.+ +.|...+..+....+|..+++.+.+.+..
T Consensus 340 ~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~ 383 (428)
T PF13347_consen 340 LADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLA 383 (428)
T ss_pred cccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHH
Confidence 99998743 23778888888888888887777665543
No 216
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.68 E-value=1.3e-06 Score=75.68 Aligned_cols=121 Identities=19% Similarity=0.206 Sum_probs=95.0
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhh--hHHHHHHHHHHHhhccc
Q 021634 22 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV--NVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 22 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~ 99 (310)
.+-.+|.++.+..+.......+..++.+++..+++|+|+|+++.++.++.+++.++..+.+ +.+.+++..++.+++.+
T Consensus 263 ~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~ 342 (467)
T COG2211 263 VTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTG 342 (467)
T ss_pred EEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhh
Confidence 4445566667777778888888888899999999999999999999999999999887765 67888888999999999
Q ss_pred ccccchhhhhhhcccccc-----h--hhhhhHHHHHHHHHHHHHHHHHhh
Q 021634 100 FANQSVPLYLSEMAPARY-----R--GAINNGFQFSIGIGALAANFINYG 142 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~-----r--~~~~~~~~~~~~~g~~~~~~~~~~ 142 (310)
...+...++++|..+-.+ | |...+....+.=+|..++..+.++
T Consensus 343 ~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~ 392 (467)
T COG2211 343 IANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGW 392 (467)
T ss_pred ccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988775321 2 555666666666666666555443
No 217
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.66 E-value=4.6e-07 Score=81.07 Aligned_cols=136 Identities=10% Similarity=0.030 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHH----HhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhh---------HHHHHHHHHHHhhccccc
Q 021634 35 SFTSSLYVAGLVA----SFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVN---------VYMLIFGRLLLGVGVGFA 101 (310)
Q Consensus 35 ~~~~~~~~~~~~~----~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~~r~l~G~~~~~~ 101 (310)
+..++..+...+. ...++++.+|++.++.+.+|.++.+++.+..+.+.+ .+.++...++.|+|+...
T Consensus 320 ~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~ 399 (500)
T PRK09584 320 QYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMI 399 (500)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHH
Confidence 3334444444444 444577777777778888999999999888776655 457788899999999999
Q ss_pred ccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcc--c-----CCCchhHHHHHhhHHHHHHHHHHh
Q 021634 102 NQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQ--I-----KGGWGWRVSLALAAVPASILTLGA 170 (310)
Q Consensus 102 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~--~-----~~~~~wr~~~~~~~~~~~~~~~~~ 170 (310)
.|....++.+..|++.||+.+|.+.....+|..++..+...... . ....+....|...++.+++..+..
T Consensus 400 ~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~ 475 (500)
T PRK09584 400 SGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLM 475 (500)
T ss_pred hHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888888887777542221 0 001135677777666655444333
No 218
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.63 E-value=1.2e-06 Score=64.69 Aligned_cols=111 Identities=19% Similarity=0.136 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccchhhhhhhc
Q 021634 33 LTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEM 112 (310)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~ 112 (310)
--.-.++.+....+.+++.+.+.+++|.|+.+++|.+...+-.... +-++.+.++.+-.+.|++.+..++....++.+.
T Consensus 39 G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 39 GYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred cHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 3444566667778888999999999999999999999988655543 556778889999999999999999999999999
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHHHHHhhhc
Q 021634 113 APARYRGAINNGFQFSIGIGALAANFINYGTE 144 (310)
Q Consensus 113 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~ 144 (310)
.++++|++..+++......+.++|.++..++.
T Consensus 118 s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred CCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888888888887765543
No 219
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.60 E-value=1.3e-05 Score=69.56 Aligned_cols=108 Identities=19% Similarity=0.135 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccchhhhhhhccccc
Q 021634 37 TSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPAR 116 (310)
Q Consensus 37 ~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~ 116 (310)
.++.+....+++++.+.+.|+.|.|..+.++........+..-+. |-+-++.+..+.|+|.+..+.....|++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~-N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP-NSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc-chHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 677788889999999999999999999999999988887766544 4666788899999999999999999999999999
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHHhhhcc
Q 021634 117 YRGAINNGFQFSIGIGALAANFINYGTEQ 145 (310)
Q Consensus 117 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 145 (310)
.+.+..++.......+.++|..+-..+..
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~~~ 163 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIYFQ 163 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheeeeE
Confidence 99999999888888888888777554443
No 220
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.55 E-value=1.6e-06 Score=77.11 Aligned_cols=137 Identities=13% Similarity=0.074 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHHHHHhhhH----HHHhh-hCchhHH--HHHHHHHHHHHHHhhh---------hhhHHHHHHHHHHHhh
Q 021634 33 LTSFTSSLYVAGLVASFVAS----SVTRA-FGRKPSV--LMGGAAFLAGSALGGA---------AVNVYMLIFGRLLLGV 96 (310)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~g----~l~dr-~Grr~~~--~~~~~~~~~~~~~~~~---------~~~~~~l~~~r~l~G~ 96 (310)
.+++.++..+...+.+++.. ++.+| .+++... .+|.++.+++....++ ..|++.+++..++.++
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 45666677777777766655 44544 3334444 6788888887776654 4688999999999999
Q ss_pred cccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc
Q 021634 97 GVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF 172 (310)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~ 172 (310)
|+....|....++++..|++.||++++++.....+|..+++.+....... .+|...|...++..++..+..++
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 466 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVP---QGVTGVFGKIGLVTLLVGVVMAL 466 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cchhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998887655432 35777777766666655554433
No 221
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.53 E-value=4.5e-06 Score=75.15 Aligned_cols=154 Identities=17% Similarity=0.079 Sum_probs=94.8
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhH-------------HH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNV-------------YM 86 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~-------------~~ 86 (310)
+.+-++.+.+.+. .+...+..+...++..+...+.||+|||+.++.+...+.++.++.+..... ..
T Consensus 319 ~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (513)
T KOG0254|consen 319 TTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLA 397 (513)
T ss_pred HHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHH
Confidence 3344455555443 555666677778888888999999999999999999999998877654211 12
Q ss_pred HHHHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHH
Q 021634 87 LIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASIL 166 (310)
Q Consensus 87 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~ 166 (310)
+...-+..........++...+.+|.+|.+.|+++.++......+...+....-...... .++...|...+..+.+.
T Consensus 398 ~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~---~~~~~~f~~f~~~~~~~ 474 (513)
T KOG0254|consen 398 IVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEA---LGIGGTFGYFGGICLLS 474 (513)
T ss_pred HHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHh---ccccchHHHHHHHHHHH
Confidence 222223333333334556667889999999999988887766655544433322112211 11234444444444433
Q ss_pred HH--HhhcccCCc
Q 021634 167 TL--GALFLPETP 177 (310)
Q Consensus 167 ~~--~~~~~~es~ 177 (310)
.. ..+++||+.
T Consensus 475 ~~~fv~~~~pETk 487 (513)
T KOG0254|consen 475 LIIFVFFFVPETK 487 (513)
T ss_pred HHHHheEEcccCC
Confidence 33 556689974
No 222
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.51 E-value=3.4e-06 Score=69.80 Aligned_cols=149 Identities=18% Similarity=0.119 Sum_probs=115.4
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhh-CchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF-GRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 98 (310)
|.+-.|-|+|..+.|++.+...+....+++....+++|. .+|+..+....+..++.+.+.+.+.-..+.. -++.|+|.
T Consensus 232 P~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~ 310 (395)
T COG2807 232 PAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQ 310 (395)
T ss_pred HHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCcc
Confidence 566677899999999999999999999999999999976 5788888888888888887777655443333 49999999
Q ss_pred cccccchhhhhhhcccccc-hhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhh
Q 021634 99 GFANQSVPLYLSEMAPARY-RGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL 171 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~ 171 (310)
|..++....++.+..+..+ -++..++.+...-+=...+|.+.+++.+..+ +|+......+...+...+.-+
T Consensus 311 G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g--sw~~~~~~l~~~~i~m~i~Gl 382 (395)
T COG2807 311 GGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG--SWSAPLVLLALATLLMLIFGL 382 (395)
T ss_pred chHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC--ChHHHHHHHHHHHHHHHHHHh
Confidence 9999999999988876544 4566666666666666778888888877665 688887776666665554443
No 223
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.50 E-value=3.7e-07 Score=78.36 Aligned_cols=112 Identities=15% Similarity=0.082 Sum_probs=83.4
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhh--hh--hHHHHHHHHHHHh
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA--AV--NVYMLIFGRLLLG 95 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~--~~--~~~~l~~~r~l~G 95 (310)
.++++.+|.++.+.+.+.+...+...++.++.|+++||+|||+.+..+......+..+..+ .. +.+...+.-.+.+
T Consensus 250 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (366)
T TIGR00886 250 MFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALF 329 (366)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHH
Confidence 3455678999999999999999999999999999999999998887777666665554433 22 4555445555555
Q ss_pred hcccccccchhhhhhhcccccchhhhhhHHHHHHHHH
Q 021634 96 VGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIG 132 (310)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 132 (310)
++.|...+....++.|..| +++|.+.|+.+....+|
T Consensus 330 ~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 330 FFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 5556666667777888886 68999999887766554
No 224
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.50 E-value=4.6e-06 Score=72.49 Aligned_cols=123 Identities=15% Similarity=0.046 Sum_probs=91.5
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHH-HHHHHhhh--hhhHHHHHHHHHHHhhcc
Q 021634 22 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFL-AGSALGGA--AVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 22 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~-~~~~~~~~--~~~~~~l~~~r~l~G~~~ 98 (310)
+++.+|.++.+.+++.....++..+++++.+++.||++++........... +....... ..+.+.+....++.|++.
T Consensus 234 ~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 313 (394)
T PRK11652 234 MGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGA 313 (394)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence 344578899999999988889999999999999999984433322222211 21111111 235566777789999999
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcc
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQ 145 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 145 (310)
+...+....+..|..| ++++.+.++.+....+|..+++.+++.+..
T Consensus 314 ~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 314 GMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred HHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 9889999998999886 578999999999999999999998776653
No 225
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.44 E-value=1.4e-06 Score=56.65 Aligned_cols=75 Identities=12% Similarity=0.059 Sum_probs=66.8
Q ss_pred hHhhhccccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHH
Q 021634 12 VHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLI 88 (310)
Q Consensus 12 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~ 88 (310)
.+.++. |.+++|.++|.++.+++.+.+++|+.+|++...++.++..+++.+..+.+...+..+.+++.++.+.+.
T Consensus 10 ayTplL--P~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w~ 84 (85)
T PF06779_consen 10 AYTPLL--PLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLWS 84 (85)
T ss_pred HHHhHh--HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence 344443 889999999999999999999999999999999999998889999999999999999999988877653
No 226
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.42 E-value=4.2e-09 Score=93.13 Aligned_cols=152 Identities=18% Similarity=0.111 Sum_probs=94.5
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhh--h--h-hh-----HHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGG--A--A-VN-----VYMLIF 89 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~--~--~-~~-----~~~l~~ 89 (310)
+.+.++.+.++. -.......+...++.++...+.||+|||+.++.+.++.+++.+..+ . . ++ ...+..
T Consensus 277 ~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 354 (451)
T PF00083_consen 277 PSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVF 354 (451)
T ss_pred cccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccee
Confidence 555666666666 2233344455567777888999999999999999988888877664 1 1 11 122222
Q ss_pred HHHHHhhccc-ccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHH-HH
Q 021634 90 GRLLLGVGVG-FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASI-LT 167 (310)
Q Consensus 90 ~r~l~G~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~-~~ 167 (310)
. .+...+.+ +..+....+..|.+|.+.|+++.++......++..+++.+...+.+. .+-...+.+.+.+.++ ..
T Consensus 355 ~-~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~---~~~~~~~~i~~~~~~i~~i 430 (451)
T PF00083_consen 355 L-ALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNN---LGGWGVFLIFAGVCLIAII 430 (451)
T ss_pred e-eecccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccchhhHHHHHHHHh
Confidence 2 22222222 33456668889999999999999998888888877777664333322 2212334444444444 34
Q ss_pred HHhhcccCCc
Q 021634 168 LGALFLPETP 177 (310)
Q Consensus 168 ~~~~~~~es~ 177 (310)
+..+++||+.
T Consensus 431 ~~~~~lpET~ 440 (451)
T PF00083_consen 431 FVYFFLPETK 440 (451)
T ss_pred heeEEEeeCC
Confidence 4556799984
No 227
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.40 E-value=3.4e-07 Score=79.20 Aligned_cols=144 Identities=14% Similarity=0.119 Sum_probs=117.7
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccch
Q 021634 26 CKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSV 105 (310)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 105 (310)
.+-.+...|........+-++.-++.+.+.+|+|+-+++.+++.+..+=.+..++.+|.|..+...+++|+..+..+...
T Consensus 401 ~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~ 480 (618)
T KOG3762|consen 401 LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAI 480 (618)
T ss_pred cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHH
Confidence 33344445556666677778888899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccccchhhhhhHHH-HHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc
Q 021634 106 PLYLSEMAPARYRGAINNGFQ-FSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF 172 (310)
Q Consensus 106 ~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~ 172 (310)
.+|++...||+-|..+.++.+ ...++|--+|.++++.+... ++=|..|.+.++.+++.++....
T Consensus 481 ~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~---fg~~ttf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 481 ISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVER---FGARTTFRIFGIACLVTLALFIS 545 (618)
T ss_pred HHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhee---ehhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998866 45566777777777766554 45678888878777776655543
No 228
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.40 E-value=4.9e-06 Score=74.22 Aligned_cols=138 Identities=12% Similarity=0.060 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHhhhCchhH-------HHHHHHHHHHHHHHhh-----h-----hhhHHHHHHHHHHHhh
Q 021634 34 TSFTSSLYVAGLVASFVASSVTRAFGRKPS-------VLMGGAAFLAGSALGG-----A-----AVNVYMLIFGRLLLGV 96 (310)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~-------~~~~~~~~~~~~~~~~-----~-----~~~~~~l~~~r~l~G~ 96 (310)
.++.+...+...+.+++.+++.||.|+|+. +.+|.++.+++.+..+ + ..+.+.++..-++.|+
T Consensus 312 ~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~ 391 (489)
T PRK10207 312 VSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSL 391 (489)
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 444555566677888889999999999873 6677777666654221 1 1356777788999999
Q ss_pred cccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCC-------CchhHHHHHhhHHHHHHHHHH
Q 021634 97 GVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKG-------GWGWRVSLALAAVPASILTLG 169 (310)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~~wr~~~~~~~~~~~~~~~~ 169 (310)
|++...+....++.+..|++.++.+++++.....+|..++..++.......+ .....+.|...++..++..+.
T Consensus 392 Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~ 471 (489)
T PRK10207 392 GELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVV 471 (489)
T ss_pred HHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998888754421110 012445666555555544444
Q ss_pred hh
Q 021634 170 AL 171 (310)
Q Consensus 170 ~~ 171 (310)
.+
T Consensus 472 ~~ 473 (489)
T PRK10207 472 MA 473 (489)
T ss_pred HH
Confidence 43
No 229
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.39 E-value=5.9e-06 Score=72.16 Aligned_cols=130 Identities=8% Similarity=-0.075 Sum_probs=95.3
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccchh
Q 021634 27 KFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVP 106 (310)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 106 (310)
+.+....+...+.+..+..+|.++.+++.||+++|+++.++.++..+..++....++... ..+-.+.|++.+..+|...
T Consensus 265 ~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~ 343 (410)
T TIGR00885 265 GMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPTIY 343 (410)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHH
Confidence 334455555666777888999999999999999999999998888888888877766544 5666788888888899999
Q ss_pred hhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCC--Cc-hhHHHHHhh
Q 021634 107 LYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKG--GW-GWRVSLALA 159 (310)
Q Consensus 107 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~-~wr~~~~~~ 159 (310)
.+..+..+++.+.....+.. + .+|..+.|++.+.+.+..+ +. +.+..|++.
T Consensus 344 sl~~~~~g~~~~~~s~~l~~-~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~ 397 (410)
T TIGR00885 344 GIALKGLGQDTKYGAAGLVM-A-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILP 397 (410)
T ss_pred HHHHhhhhhhhhhhHHHHHH-H-HhccchHHHHHHHHHHHhcccccCccchHHHHH
Confidence 99999997665433333333 3 3899999999888876321 11 355666653
No 230
>PRK11462 putative transporter; Provisional
Probab=98.37 E-value=2e-05 Score=69.90 Aligned_cols=115 Identities=14% Similarity=0.050 Sum_probs=72.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh--hhHHHHHHHHHHHhhcccccccchhh
Q 021634 30 SQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA--VNVYMLIFGRLLLGVGVGFANQSVPL 107 (310)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~ 107 (310)
++..+.+.+.+.++.+++.+++++++||+|+|+.+..+..+..+..++..+. .+...+.+.-++.|++.+...+....
T Consensus 262 ~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~ 341 (460)
T PRK11462 262 PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWV 341 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345566777888889999999999999999998775555444433333222 22223344456677777666666677
Q ss_pred hhhhccccc-----ch--hhhhhHHHHHHHHHHHHHHHHHhhhc
Q 021634 108 YLSEMAPAR-----YR--GAINNGFQFSIGIGALAANFINYGTE 144 (310)
Q Consensus 108 ~~~~~~~~~-----~r--~~~~~~~~~~~~~g~~~~~~~~~~~~ 144 (310)
+++|..+.+ +| |...+......-+|..+++.+++.+.
T Consensus 342 m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL 385 (460)
T PRK11462 342 MMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWML 385 (460)
T ss_pred HHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777776521 22 44456655666666666666555443
No 231
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.34 E-value=0.00014 Score=63.19 Aligned_cols=256 Identities=10% Similarity=0.005 Sum_probs=128.8
Q ss_pred HHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhh------h--h----hHHH---HHHHHHHHhhcccc-cccc
Q 021634 41 YVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA------A--V----NVYM---LIFGRLLLGVGVGF-ANQS 104 (310)
Q Consensus 41 ~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~------~--~----~~~~---l~~~r~l~G~~~~~-~~~~ 104 (310)
.+..++.++..|.+.||..|.+++..+.+..-++....+. . . +.+. +++.-.+.|.-... ....
T Consensus 48 ~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~ 127 (432)
T PF06963_consen 48 SLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIAN 127 (432)
T ss_pred HHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3455677888899999999999887766554444332221 1 1 1121 12222222211111 0111
Q ss_pred hhhhhhhcc------cccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHH-hhcc---c
Q 021634 105 VPLYLSEMA------PARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLG-ALFL---P 174 (310)
Q Consensus 105 ~~~~~~~~~------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~-~~~~---~ 174 (310)
....=.||. +++.+.+..+...-.-.+.-+++|++.+.+... .+.+....+.+...++.... ++++ .
T Consensus 128 ~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~---~s~~~~~~~i~~~N~~S~~vEy~~l~~VY 204 (432)
T PF06963_consen 128 TIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTF---ASPVIAAIFIAGWNLASVFVEYFLLARVY 204 (432)
T ss_pred hheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---cCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111123442 345556777777777888888888887766543 34666555555555444332 2221 1
Q ss_pred CCchhhHhccCcHHHHHHHHHHhcCCcchHHHHHHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHH
Q 021634 175 ETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVI 254 (310)
Q Consensus 175 es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (310)
+..+.+..++++.++....... ...+.+......+...+.-++....|+..+++ +.+...+...+.+++ ...+
T Consensus 205 ~~~P~L~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q----~vflas~alalLY~T-VLsf 277 (432)
T PF06963_consen 205 NSVPALAVKKRSSESESSSDEE--SSSESSSDPSILKRLWNPLRTIIRGWRTYFRQ----PVFLASFALALLYFT-VLSF 277 (432)
T ss_pred HhChHhcCCCCCcccccccccc--ccccccchhhHHHHHHHHHHHHhccHHHHHhC----HHHHHHHHHHHHHHH-HhcC
Confidence 1111121111111110000000 00000000000000000111112344444443 333333333333332 2334
Q ss_pred HHhHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 255 AFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 255 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
......|+.+.|+++...+.+-....+.++.|.+...+ +.+|+|..+.-+.+
T Consensus 278 ~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~--l~~riGlvr~G~~~ 329 (432)
T PF06963_consen 278 GGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPW--LMKRIGLVRAGLWS 329 (432)
T ss_pred cHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhcchhhHHHH
Confidence 66677788888999999999999999999999999999 99999987765554
No 232
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.34 E-value=1.2e-06 Score=74.45 Aligned_cols=124 Identities=17% Similarity=0.221 Sum_probs=93.6
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHh----hhCchhHHHH-HHHHHHHHHHHhhhhhhH----------
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTR----AFGRKPSVLM-GGAAFLAGSALGGAAVNV---------- 84 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~Grr~~~~~-~~~~~~~~~~~~~~~~~~---------- 84 (310)
+....++|++.+..+.+-....+...+.+++.|..+| ||||||.++. +.....++.++..++.++
T Consensus 56 tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~ 135 (498)
T KOG0637|consen 56 TPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERK 135 (498)
T ss_pred cHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCccc
Confidence 4455678888888888888888888999999999999 5898776654 555666666666665332
Q ss_pred -------HHHHHHHHHHhhcccccccchhhhhhhcccccchhh-hhhHHHHHHHHHHHHHHHHHhhh
Q 021634 85 -------YMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGA-INNGFQFSIGIGALAANFINYGT 143 (310)
Q Consensus 85 -------~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~~~g~~~~~~~~~~~ 143 (310)
..++++--+.-++....+..+-+++.|...++++-+ +.+++....++|..+|..++.+.
T Consensus 136 ~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 136 PVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred ccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc
Confidence 333444445555666788999999999998777766 99999999999999988877543
No 233
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.33 E-value=4.2e-06 Score=73.59 Aligned_cols=153 Identities=13% Similarity=0.108 Sum_probs=102.4
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCc--------hhHH-HHHHHHHHHHHHHhhhhhh--H-HH
Q 021634 19 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGR--------KPSV-LMGGAAFLAGSALGGAAVN--V-YM 86 (310)
Q Consensus 19 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Gr--------r~~~-~~~~~~~~~~~~~~~~~~~--~-~~ 86 (310)
..++.+-++.+..+.|+++++..+.+.+..+++|.++||.-+ ||++ .++....+++.+..++.++ . ..
T Consensus 282 PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a 361 (466)
T KOG2532|consen 282 PTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLA 361 (466)
T ss_pred hHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHH
Confidence 456777889999999999999999999999999999998754 2222 3444445555555555542 2 12
Q ss_pred HHHHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHH
Q 021634 87 LIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASIL 166 (310)
Q Consensus 87 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~ 166 (310)
+...-+..++ .|...+....-..|. .|++-+..+++.+....+..+++|.+.+.+........||.+|++.+++.++.
T Consensus 362 ~~~l~~~~~~-~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~ 439 (466)
T KOG2532|consen 362 VILLTIAIGL-SGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVG 439 (466)
T ss_pred HHHHHHHHHH-cccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 2222222222 122222222222332 46778899999999999999999999877765223458999999988888777
Q ss_pred HHHhhcc
Q 021634 167 TLGALFL 173 (310)
Q Consensus 167 ~~~~~~~ 173 (310)
.+.+.++
T Consensus 440 ~i~f~~f 446 (466)
T KOG2532|consen 440 NIIFLFF 446 (466)
T ss_pred chheeEe
Confidence 6555444
No 234
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.33 E-value=2e-05 Score=66.74 Aligned_cols=152 Identities=16% Similarity=0.112 Sum_probs=123.7
Q ss_pred cccccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHh-hhCchhHHHHHHHHHHHHHHHhh---hhhhHHHHHHHHHH
Q 021634 18 EDTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTR-AFGRKPSVLMGGAAFLAGSALGG---AAVNVYMLIFGRLL 93 (310)
Q Consensus 18 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~Grr~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l 93 (310)
-+|+=.+-||++..+...++.....|..++-...|++.. |.++|+.-.+|+....++..+.. ...+.+.+..+-++
T Consensus 231 LEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l 310 (403)
T PF03209_consen 231 LEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFL 310 (403)
T ss_pred cCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 368888899999999999999999999999999999877 67788887788877777765543 34678888899999
Q ss_pred HhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccc----C---CCchhHHHHHhhHHHHHHH
Q 021634 94 LGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQI----K---GGWGWRVSLALAAVPASIL 166 (310)
Q Consensus 94 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~---~~~~wr~~~~~~~~~~~~~ 166 (310)
.|++.|.......+.+-|...+++.|..+|.+.....++..++..+++.+.+. . ...+|..+|.+.++..++.
T Consensus 311 ~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a 390 (403)
T PF03209_consen 311 LGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAA 390 (403)
T ss_pred HHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHH
Confidence 99999998888889999999999999999999999988888888888766542 1 2346777887777666555
Q ss_pred HHH
Q 021634 167 TLG 169 (310)
Q Consensus 167 ~~~ 169 (310)
...
T Consensus 391 ~~l 393 (403)
T PF03209_consen 391 LVL 393 (403)
T ss_pred HHH
Confidence 443
No 235
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.32 E-value=4.7e-07 Score=76.93 Aligned_cols=134 Identities=19% Similarity=0.035 Sum_probs=99.0
Q ss_pred HHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhh-H---HHHHHHHHHHhhcc-cccccchhhhhhhcccccchh
Q 021634 45 LVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVN-V---YMLIFGRLLLGVGV-GFANQSVPLYLSEMAPARYRG 119 (310)
Q Consensus 45 ~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~-~---~~l~~~r~l~G~~~-~~~~~~~~~~~~~~~~~~~r~ 119 (310)
..|-.+...+.|+.|||++.+.|.+++.+..+..+...+ . ..+++...+..++. -+.......+-+|.+|.+.|+
T Consensus 362 vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~ 441 (538)
T KOG0252|consen 362 VPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRS 441 (538)
T ss_pred CCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhh
Confidence 446677788999999999999999999999998888766 1 12222222222221 112344556679999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhcc--cCCCchhHHHHHhhHHHHHHHHHHhhcccCCch
Q 021634 120 AINNGFQFSIGIGALAANFINYGTEQ--IKGGWGWRVSLALAAVPASILTLGALFLPETPN 178 (310)
Q Consensus 120 ~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~ 178 (310)
..-++.....-+|.+++...-..+.+ .....+.|.++++.+.+.++..+..+++||+.+
T Consensus 442 t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~ 502 (538)
T KOG0252|consen 442 TCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKG 502 (538)
T ss_pred hhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccc
Confidence 99999999988898888777444443 122457899999999999998888899998853
No 236
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.28 E-value=5.7e-06 Score=53.35 Aligned_cols=64 Identities=14% Similarity=0.145 Sum_probs=56.6
Q ss_pred HHHHHHhhhHHHHHHhHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhh
Q 021634 242 IPFFQQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 307 (310)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~ 307 (310)
..++..+.+...+..|.|.++++.|+++.+.+.+.++..+..+++.++.+. ++||.++++..+.
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~--laDk~~~~~~~l~ 70 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGF--LADKFGKRKVILL 70 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHCccHHHHH
Confidence 445556667778899999999999999999999999999999999999999 9999999887664
No 237
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.25 E-value=2.7e-05 Score=68.64 Aligned_cols=143 Identities=17% Similarity=0.042 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHhhhC-chhHHHHHHHHHHHHHHHhhhhhh---------------------HHHHHHHH
Q 021634 34 TSFTSSLYVAGLVASFVASSVTRAFG-RKPSVLMGGAAFLAGSALGGAAVN---------------------VYMLIFGR 91 (310)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~g~l~dr~G-rr~~~~~~~~~~~~~~~~~~~~~~---------------------~~~l~~~r 91 (310)
.+....+.+...+.+++.-++.+|+| ||++..++.++..++.....+.++ .+..++.-
T Consensus 308 ~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (477)
T TIGR01301 308 AFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVF 387 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHH
Confidence 34444455555677788888999999 477778898888888777665443 26667778
Q ss_pred HHHhhcccccccchhhhhhhcccc--cchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHH
Q 021634 92 LLLGVGVGFANQSVPLYLSEMAPA--RYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLG 169 (310)
Q Consensus 92 ~l~G~~~~~~~~~~~~~~~~~~~~--~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~ 169 (310)
.+.|+..+..+..-.+++++..++ ++.|..+|+++.+..+..++..+..+.+.+..+. +-.+.+.+.++..++..+.
T Consensus 388 ~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~-~~~~~~~~~gv~~~~aa~~ 466 (477)
T TIGR01301 388 AILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGG-GNLPAFVVGAVAAFVSGLL 466 (477)
T ss_pred HHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCC-CCeeHHHHHHHHHHHHHHH
Confidence 899999999999999999999985 4459999999999999998888776664444332 3456788888888887766
Q ss_pred hhc-ccCCc
Q 021634 170 ALF-LPETP 177 (310)
Q Consensus 170 ~~~-~~es~ 177 (310)
.++ +|+.+
T Consensus 467 ~~~~~~~~~ 475 (477)
T TIGR01301 467 ALILLPRPR 475 (477)
T ss_pred HHHhCCCCC
Confidence 655 67654
No 238
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.21 E-value=1.4e-06 Score=72.73 Aligned_cols=144 Identities=13% Similarity=0.027 Sum_probs=109.3
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhC--chhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccccc
Q 021634 24 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFG--RKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFA 101 (310)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G--rr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 101 (310)
|.+..+..+.+...--..+.+.+++.+.|.++||++ |-.....+++..++++....+++++..+++-++..|++.+..
T Consensus 299 e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~ 378 (464)
T KOG3764|consen 299 ETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLA 378 (464)
T ss_pred HhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHH
Confidence 344434446666666678889999999999999999 544555677777777777889999999999999888888777
Q ss_pred ccchhhhhhhccccc------chhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHh
Q 021634 102 NQSVPLYLSEMAPAR------YRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA 170 (310)
Q Consensus 102 ~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~ 170 (310)
.........+..+.+ .-|...++...++.+|..++|.+++.+.+. .|++|...+.++..++..-+.
T Consensus 379 dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~---iGF~wl~~iig~~n~iyapvl 450 (464)
T KOG3764|consen 379 DASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEA---IGFEWLMTIIGILNLIYAPVL 450 (464)
T ss_pred HHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheee---hhHHHHHHHHHHHHHHHHHHH
Confidence 666655555555443 346788899999999999999998887754 468888877777776654443
No 239
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.17 E-value=0.0022 Score=56.85 Aligned_cols=266 Identities=12% Similarity=0.101 Sum_probs=139.4
Q ss_pred hhHhhhccccccccccccchhHHHHHHHHHHH-HHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh--------
Q 021634 11 EVHRKMKEDTKISNYCKFDSQLLTSFTSSLYV-AGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA-------- 81 (310)
Q Consensus 11 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~-------- 81 (310)
...+++. |.-+.... +++.+..+-....+ ...+...+...+++|++|.+++-+....+.....+.++.
T Consensus 41 ~~lR~~K-D~lvvt~~--gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~l 117 (491)
T PF03219_consen 41 TILRDLK-DTLVVTAQ--GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDIL 117 (491)
T ss_pred HHHHHhc-CeEEEecC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhc
Confidence 3334333 44444444 56667777775555 445667889999999999998876665555554444431
Q ss_pred -h----------------------hHHHHHHHHHHHhhccccccc-chhhhhhhcccccchhhhhhHHHHHHHHHHHHHH
Q 021634 82 -V----------------------NVYMLIFGRLLLGVGVGFANQ-SVPLYLSEMAPARYRGAINNGFQFSIGIGALAAN 137 (310)
Q Consensus 82 -~----------------------~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 137 (310)
+ +.|...+..+..-+-.....+ .-+.+.+|.++.+|-.|..+++..+.++|.++++
T Consensus 118 hp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG 197 (491)
T PF03219_consen 118 HPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSG 197 (491)
T ss_pred CCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 112222222222222233333 4578889999999999999999999999999988
Q ss_pred HHHhhhcc------cCCCchhHHHHHh----hHHHHHHHHHHhhcccCCchhhHhccCcHHHHHHHHHHhcCCcchHHHH
Q 021634 138 FINYGTEQ------IKGGWGWRVSLAL----AAVPASILTLGALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEF 207 (310)
Q Consensus 138 ~~~~~~~~------~~~~~~wr~~~~~----~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (310)
.+...+.+ ..+...|...... ..+.+++.......+.+.. ..++. . .
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~v---l~~~~-~------------------~- 254 (491)
T PF03219_consen 198 QLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNV---LTDPR-F------------------Y- 254 (491)
T ss_pred HHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHc---cCccc-c------------------c-
Confidence 88776666 1122346543321 2222222222222222110 00000 0 0
Q ss_pred HHHHHhhhccccccchhhhhccccchhHHHHHHHHHHHHHhhhHHHHHHhHHHHHHHcCCCchh----HHHHHHHHHhhh
Q 021634 208 DDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRTIGLGRLK----VCQLSKWIECGG 283 (310)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~ 283 (310)
..+..+++++.+.+.++.++...+.+.+..+++.........+.+...--..+++.--++.+ .+......++..
T Consensus 255 --~~~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivt 332 (491)
T PF03219_consen 255 --PSAKKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVT 332 (491)
T ss_pred --hhhhcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHH
Confidence 00111223333444555554444455555555555554444454444444444433223322 233344445555
Q ss_pred hhhhhHHHHHHHHHHhccchhhh
Q 021634 284 SIGFGRNMWVKWMNRVRWRKLDI 306 (310)
Q Consensus 284 ~~g~~~~~~~~l~d~~g~r~~~~ 306 (310)
++-.++++. +.+|+|.+...+
T Consensus 333 ii~~~l~~~--iir~~GW~~~Al 353 (491)
T PF03219_consen 333 IIMMFLSSN--IIRRFGWRTAAL 353 (491)
T ss_pred HHHHHHHHH--HHHHhhHHHHHH
Confidence 555566666 788888766544
No 240
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.10 E-value=6.5e-05 Score=67.88 Aligned_cols=133 Identities=23% Similarity=0.188 Sum_probs=95.6
Q ss_pred HHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHH---HHHHHHHHhhcccccccchhhhhhhcccccchh
Q 021634 43 AGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYM---LIFGRLLLGVGVGFANQSVPLYLSEMAPARYRG 119 (310)
Q Consensus 43 ~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~ 119 (310)
.........+...|++|||.....+.++..++.+..++...... ..+...+...+.+..+.....+.+|.+|...|.
T Consensus 362 ~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~ 441 (521)
T KOG0255|consen 362 VELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRN 441 (521)
T ss_pred HHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 44555566688999999999999999999999998887754332 444555555666666777799999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHH-HHHhhcccCCchh
Q 021634 120 AINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASIL-TLGALFLPETPNS 179 (310)
Q Consensus 120 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~-~~~~~~~~es~~~ 179 (310)
.+.+.......+|.+++|.+......... .+... +.+....+. .+...++||+...
T Consensus 442 ~~~~~~~~~~~~~~i~ap~~~~~~~~~~~--~~~~~--~~~~~~~l~~~~~~~~lpet~~~ 498 (521)
T KOG0255|consen 442 TAVGAISAAARLGSILAPLFPLLLRQMFP--LLGLI--LFGWLALLLGLLSLLLLPETKGK 498 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcc--cchHH--HHHHHHHHHHHHHHhcCcccCCC
Confidence 99999999999999999998755443211 12111 123333333 3444779998643
No 241
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.09 E-value=2.3e-05 Score=64.46 Aligned_cols=158 Identities=14% Similarity=0.070 Sum_probs=110.6
Q ss_pred cccccchhHHH-HHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccc
Q 021634 24 NYCKFDSQLLT-SFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFAN 102 (310)
Q Consensus 24 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 102 (310)
.+.++++.+.. -+.-...-.+.+.-++.=.+.|-.-.|++++.-.+.....-.+.-+.++.+.+-+.-++.|... ...
T Consensus 34 p~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~t-AaE 112 (433)
T KOG3810|consen 34 PDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPAT-AAE 112 (433)
T ss_pred CCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHH-HHH
Confidence 45566665542 2222333344555556667899999999998877777777777888999999888888888864 346
Q ss_pred cchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCchhhHh
Q 021634 103 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNSLIQ 182 (310)
Q Consensus 103 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~ 182 (310)
...++|+-+..+++++-++.+..-...-.|...+..++-.+... +..+++..-.+......+.....+++|..+|....
T Consensus 113 IAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~-~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f 191 (433)
T KOG3810|consen 113 IAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSL-ETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYF 191 (433)
T ss_pred HhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhh-cccchhhhchhhHHHHHHHHHHHhhCCCCchhhhh
Confidence 77788999999999999999888888777777777776655443 22456666666555555666667778776654443
Q ss_pred c
Q 021634 183 R 183 (310)
Q Consensus 183 ~ 183 (310)
+
T Consensus 192 ~ 192 (433)
T KOG3810|consen 192 H 192 (433)
T ss_pred h
Confidence 3
No 242
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.08 E-value=1.6e-05 Score=51.23 Aligned_cols=48 Identities=10% Similarity=0.171 Sum_probs=42.9
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHH
Q 021634 23 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAA 70 (310)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 70 (310)
.++.|+++.++|.+.++..+...++++++|.++||+|+++.++.....
T Consensus 27 ~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 27 LKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred hhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 346899999999999999999999999999999999998887766554
No 243
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.02 E-value=5.9e-05 Score=63.56 Aligned_cols=129 Identities=10% Similarity=0.079 Sum_probs=102.3
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccc
Q 021634 23 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFAN 102 (310)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 102 (310)
.+..|.++.+.+...+.+..+.++|.++..++..|+...|.+.+..+...+-++..+++++...+ .+-++.|++.+..+
T Consensus 264 ~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~~-~~l~~ig~F~simf 342 (422)
T COG0738 264 EELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVAL-YALFLIGLFNSIMF 342 (422)
T ss_pred HhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHHH-HHHHHHHHHhHHHH
Confidence 33468899999999999999999999999999999999999999998888888888888886554 44578888899999
Q ss_pred cchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHH
Q 021634 103 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLA 157 (310)
Q Consensus 103 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~ 157 (310)
|...++-.+..| + .....+..-+...+|+.+.|.+-+++.+.. +-...+.
T Consensus 343 PTIfslal~~l~-~-~ts~~s~~l~maivGGAiiP~l~G~i~d~~---g~~~~~~ 392 (422)
T COG0738 343 PTIFSLALKNLG-E-HTSVGSGLLVMAIVGGAIIPPLQGVIADMF---GIQLTFL 392 (422)
T ss_pred HHHHHHHHhccC-c-cccccceeeeeheecchHHHHHHHHHHHhh---hhHHHHH
Confidence 999999989888 3 333344444555678888888877777543 3444444
No 244
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.99 E-value=0.00014 Score=63.77 Aligned_cols=125 Identities=11% Similarity=0.026 Sum_probs=79.1
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhh-----hhhhHHHHHHHHHHHh
Q 021634 21 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGG-----AAVNVYMLIFGRLLLG 95 (310)
Q Consensus 21 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~r~l~G 95 (310)
.+++.+|.++.+.++.......+..+++.+.+.+.+|.++++.......+..++..+.. ..++++..++..++.+
T Consensus 244 ~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~ 323 (413)
T PRK15403 244 ILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYA 323 (413)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHH
Confidence 45556789999999998888888888888888876555444443322222233322221 1233434566778888
Q ss_pred hcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccc
Q 021634 96 VGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQI 146 (310)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 146 (310)
+|.+...+...... ..-....+|++.++.+.....+...++..++++...
T Consensus 324 ~G~~~~~p~~~~~a-l~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~ 373 (413)
T PRK15403 324 FGIGLIFPTLFRFT-LFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN 373 (413)
T ss_pred HHHHHHhHHHHHHH-hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 88877766666422 112233478888888887777777777777766543
No 245
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.92 E-value=9.3e-05 Score=66.65 Aligned_cols=148 Identities=15% Similarity=0.078 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHhhhCch-hHHHHHHHHHHHHHHHhhh--hhhHHHHHHHHHHHhhcccccccchhhh
Q 021634 32 LLTSFTSSLYVAGLVASFVASSVTRAFGRK-PSVLMGGAAFLAGSALGGA--AVNVYMLIFGRLLLGVGVGFANQSVPLY 108 (310)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr-~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 108 (310)
..++......++..+++.+.|.+..+++|- +.++++..+..+++-.++. .+|....+..-++.|++.|.........
T Consensus 350 ~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~ 429 (599)
T PF06609_consen 350 EIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVI 429 (599)
T ss_pred eeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHe
Confidence 467788888889999999999999988864 4445666665544333332 3455555677889999988887777777
Q ss_pred hhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcc------------------------------------------c
Q 021634 109 LSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQ------------------------------------------I 146 (310)
Q Consensus 109 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~------------------------------------------~ 146 (310)
..-..|++.-+.+.++..+.-.+|+.++..+...+.. .
T Consensus 430 ~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~i 509 (599)
T PF06609_consen 430 AQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAI 509 (599)
T ss_pred eEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhC
Confidence 7777888889999999888888877776655322110 0
Q ss_pred CC-----------------CchhHHHHHhhHHHHHHHHHHhhcccCCchh
Q 021634 147 KG-----------------GWGWRVSLALAAVPASILTLGALFLPETPNS 179 (310)
Q Consensus 147 ~~-----------------~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~ 179 (310)
.+ ..++|++|+....++.+..++.++++|..++
T Consensus 510 PGit~~i~~a~~~A~~~aYa~ay~~V~~~siaFG~vaiiaa~fl~d~~~~ 559 (599)
T PF06609_consen 510 PGITPEIIAAVVAAFQEAYAHAYRYVYYSSIAFGVVAIIAALFLGDIDKY 559 (599)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHHh
Confidence 00 0157899999999999999999998876443
No 246
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.91 E-value=0.00028 Score=62.04 Aligned_cols=123 Identities=10% Similarity=0.165 Sum_probs=108.4
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhH-HHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcc
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVAS-SVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 98 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 98 (310)
-++...+++++++.+...+.......+++++.. .+...+|-|+++..|+..-.+...+.+++++.|+......+.++.
T Consensus 266 ~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~- 344 (463)
T KOG2816|consen 266 LYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA- 344 (463)
T ss_pred EEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh-
Confidence 456778999999999999999999988888877 778888999999999999999999999999999999988888774
Q ss_pred cccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhh
Q 021634 99 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGT 143 (310)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 143 (310)
+...+...+.++-+.+++++|++.++......+..+++|.+-..+
T Consensus 345 ~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 345 GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHH
Confidence 567788889999999999999999999999999988888875433
No 247
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.71 E-value=0.0001 Score=61.72 Aligned_cols=122 Identities=13% Similarity=0.084 Sum_probs=109.6
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhC--chhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccccc
Q 021634 24 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFG--RKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFA 101 (310)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G--rr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 101 (310)
+.+|.++.|+|-+.+...+++.+.+....+..||.. -+-.+..++.+..-..++.+.+++...+..+-.+-.+..+..
T Consensus 290 ~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~ 369 (451)
T KOG2615|consen 290 GRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASV 369 (451)
T ss_pred CccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHh
Confidence 789999999999999999999999999999999988 777778888887777788888888888999989988888888
Q ss_pred ccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcc
Q 021634 102 NQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQ 145 (310)
Q Consensus 102 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 145 (310)
-+....++....|+++||..+|+......++..+||.+++.+..
T Consensus 370 vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 370 VTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred hHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 88889999999999999999999999999999999999865544
No 248
>PTZ00207 hypothetical protein; Provisional
Probab=97.64 E-value=0.00026 Score=64.11 Aligned_cols=153 Identities=10% Similarity=-0.054 Sum_probs=100.4
Q ss_pred cccccccc-ccch-hHHHH-HHHHHHHHHHHHHhhhHHHHh---hhC-----chhHHHHHHHHHHHHHHHhhhhhhHHHH
Q 021634 19 DTKISNYC-KFDS-QLLTS-FTSSLYVAGLVASFVASSVTR---AFG-----RKPSVLMGGAAFLAGSALGGAAVNVYML 87 (310)
Q Consensus 19 ~~~i~~~~-~~~~-~~~~~-~~~~~~~~~~~~~~~~g~l~d---r~G-----rr~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (310)
.-+|.+.+ |.+. .+.+. +.++..++..+|-+..|.++. |.. +|+..+....+..++.++.++.-.-..+
T Consensus 376 ~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~~~~~~lll~~~~p~~~L 455 (591)
T PTZ00207 376 ARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSVCIITMLTLFLTLPKAAL 455 (591)
T ss_pred HHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHHCCccHh
Confidence 34455555 4422 22222 677778888888888887762 221 1223333333355556655555333688
Q ss_pred HHHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHH-HHHHhhhcccCC----------CchhHHHH
Q 021634 88 IFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAA-NFINYGTEQIKG----------GWGWRVSL 156 (310)
Q Consensus 88 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~----------~~~wr~~~ 156 (310)
++.-++.|++.|..+++....++|.|. ++-|+-..+......+|..+- ..+.+.+.+... ..=+|..|
T Consensus 456 ~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~ 534 (591)
T PTZ00207 456 PLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPL 534 (591)
T ss_pred HHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHH
Confidence 999999999999999999999999999 888988888888888887765 444443332211 01267888
Q ss_pred HhhHHHHHHHHHHhhc
Q 021634 157 ALAAVPASILTLGALF 172 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~ 172 (310)
++.+.+++...+....
T Consensus 535 ~v~~~~~~~g~~~s~~ 550 (591)
T PTZ00207 535 AFLLGLSFLAFITSTY 550 (591)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 8888887777666544
No 249
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.61 E-value=0.0024 Score=54.86 Aligned_cols=135 Identities=17% Similarity=0.203 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccchhhhhhhcc
Q 021634 34 TSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMA 113 (310)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~ 113 (310)
+.+.-+..+-..+..+++.+..+|...+.=...+.++..++.++.+++++.+.-+++-.+.+++.|........+ +..+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THFY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHhc
Confidence 334444455666667778888888875554566677888889999999999988888999999888877777775 4456
Q ss_pred cccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc-ccC
Q 021634 114 PARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF-LPE 175 (310)
Q Consensus 114 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~-~~e 175 (310)
++ ...+.+..+.+.++++|+..-..+.. .+ .+-|..+.+..++.++..+.+++ +|+
T Consensus 141 ~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g-~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 141 GK----SSLSAWSSGTGGAGLVGALYYLGLTT-LG-LSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred Cc----cccccccCCcChhhHHHHHHHHHHHH-hC-cCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 53 24677777777777777776555554 22 34577777766666555555544 443
No 250
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.48 E-value=0.00024 Score=63.03 Aligned_cols=132 Identities=11% Similarity=0.015 Sum_probs=81.2
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhhhHHHHhh----hCchhHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHhhccc
Q 021634 25 YCKFDSQLLTSFTSSLYVAGLVASFVASSVTRA----FGRKPSVLMGGAAFLAGS-ALGGAAVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~Grr~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~ 99 (310)
..|.|..+.+.+.+.+.++.+++.++.|+++|| ..+|..+...+.+..+.. +......+.......-+....+..
T Consensus 303 ~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~ 382 (495)
T KOG2533|consen 303 NGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLI 382 (495)
T ss_pred CCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhH
Confidence 356899999999999999999999999999999 677777766666655544 333333323333333333333344
Q ss_pred ccccchhhhhhhcccccch-hhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHh
Q 021634 100 FANQSVPLYLSEMAPARYR-GAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLAL 158 (310)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~ 158 (310)
...+......++...++.| -...+....+.+.+..+++.+- .....+.+.|...|..
T Consensus 383 ~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~--~~~~ap~y~~~~~f~~ 440 (495)
T KOG2533|consen 383 ATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLF--RSLDAPRYGWGAVFYM 440 (495)
T ss_pred HHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhc--ccccCcchhhhhHHHH
Confidence 4445555556666555444 4455556666666666555551 1222233567777744
No 251
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.45 E-value=0.0053 Score=54.70 Aligned_cols=134 Identities=13% Similarity=0.087 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHhhhCc--hh----H-HHHHHHHHHHHHHHhhhh---------hhHHHHHHHHHHHhh
Q 021634 33 LTSFTSSLYVAGLVASFVASSVTRAFGR--KP----S-VLMGGAAFLAGSALGGAA---------VNVYMLIFGRLLLGV 96 (310)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~g~l~dr~Gr--r~----~-~~~~~~~~~~~~~~~~~~---------~~~~~l~~~r~l~G~ 96 (310)
.+|..++..+...+.+|+.+++=.|.+| |. . +.+|+++.+++.+...++ .+.+.+++..++.++
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~ 389 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGF 389 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 3455666666666667776666455522 21 1 456777777776554331 356778888999999
Q ss_pred cccccccchhhhhhhcccccchhhhhhHHHHH-HHHHHHHHHHHHhhhcccC---------CCchhHHHHHhhHHHHHHH
Q 021634 97 GVGFANQSVPLYLSEMAPARYRGAINNGFQFS-IGIGALAANFINYGTEQIK---------GGWGWRVSLALAAVPASIL 166 (310)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~---------~~~~wr~~~~~~~~~~~~~ 166 (310)
|+-+..|+..+.+++..|++.||..+|.+... ..+|..++..++....... +...+...|...+...++.
T Consensus 390 gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 390 AELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999774 4688888777766553211 0113555666666555444
No 252
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.39 E-value=0.0011 Score=57.12 Aligned_cols=108 Identities=20% Similarity=0.346 Sum_probs=83.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhh---h------HHHHHHHHHHHhhcccccccchhhhhhhccccc---chhhhhhHHHHHH
Q 021634 62 PSVLMGGAAFLAGSALGGAAV---N------VYMLIFGRLLLGVGVGFANQSVPLYLSEMAPAR---YRGAINNGFQFSI 129 (310)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~---~------~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~ 129 (310)
|+++++.++..+|.++..++. . ...++++-.+.++|.|..-+....+.+|.++++ +|.+...++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567888888888888744432 2 257888889999999999999999999999876 3456778899999
Q ss_pred HHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc
Q 021634 130 GIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF 172 (310)
Q Consensus 130 ~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~ 172 (310)
++|..++..+..++.+ +.+|.+.|.+.++..++..+..+.
T Consensus 82 n~G~~~~~~~~~~i~~---~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQ---NYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHH---CS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhcc---ccchhhhhhHHHHHHHHHHHHHHh
Confidence 9999999888666663 467999999988887777665544
No 253
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.36 E-value=0.00061 Score=54.47 Aligned_cols=91 Identities=12% Similarity=0.199 Sum_probs=70.3
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccccc
Q 021634 22 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFA 101 (310)
Q Consensus 22 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 101 (310)
+-++++..+.|++.+...-+-..++...+.|-++|+-|||+.-+.-++..+++++ .-.++.|-.++++|.+-|+..+..
T Consensus 63 LYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LGGiaTsLL 141 (454)
T KOG4332|consen 63 LYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLGGIATSLL 141 (454)
T ss_pred eehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhhhhHHHHHH
Confidence 4567788888888887777777788888999999999999986666665555554 335688889999999999988877
Q ss_pred ccchhhh-hhhcc
Q 021634 102 NQSVPLY-LSEMA 113 (310)
Q Consensus 102 ~~~~~~~-~~~~~ 113 (310)
+....+. ++|.-
T Consensus 142 FSaFEsWliaEHn 154 (454)
T KOG4332|consen 142 FSAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHHhh
Confidence 7666543 56655
No 254
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.33 E-value=0.0026 Score=57.58 Aligned_cols=148 Identities=16% Similarity=0.129 Sum_probs=109.1
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhh-CchhHHHHHHHHHHHHHHHhhhhhh---------------
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF-GRKPSVLMGGAAFLAGSALGGAAVN--------------- 83 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~~~~~~~~~~~~--------------- 83 (310)
.++.++++.+...+....+.+.-......+++++++|-| ||-+++.++.++..++.++...+..
T Consensus 62 ~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~ 141 (571)
T KOG1237|consen 62 TYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGG 141 (571)
T ss_pred HHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCC
Confidence 566777888887788888888888888899999999987 8999999999988888655443211
Q ss_pred ----------HHHHHHHHHHHhhcccccccchhhhhhhccc---ccch---hhhhhHHHHHHHHHHHHHHHHHhhhcccC
Q 021634 84 ----------VYMLIFGRLLLGVGVGFANQSVPLYLSEMAP---ARYR---GAINNGFQFSIGIGALAANFINYGTEQIK 147 (310)
Q Consensus 84 ----------~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~---~~~r---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 147 (310)
...+..+.-+..+|.|+.-+....+-+|-++ ++++ ..-+.++.....+|..++..+-.+..
T Consensus 142 ~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq--- 218 (571)
T KOG1237|consen 142 NVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQ--- 218 (571)
T ss_pred CcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhh---
Confidence 1245566677778889999999999999998 3222 25667788888888888877744443
Q ss_pred CCchhHHHHHhhHHHHHHHHHHh
Q 021634 148 GGWGWRVSLALAAVPASILTLGA 170 (310)
Q Consensus 148 ~~~~wr~~~~~~~~~~~~~~~~~ 170 (310)
++.+|.+-|.+..+..++..++.
T Consensus 219 ~~~~w~lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 219 DNVGWKLGFGIPTVLNALAILIF 241 (571)
T ss_pred hcccceeeccHHHHHHHHHHHHH
Confidence 45679888877666655554443
No 255
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.22 E-value=0.0016 Score=57.32 Aligned_cols=150 Identities=9% Similarity=0.067 Sum_probs=105.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhh----------hhhHHHHHHHHHHHhhc
Q 021634 28 FDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA----------AVNVYMLIFGRLLLGVG 97 (310)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~----------~~~~~~l~~~r~l~G~~ 97 (310)
.|+...+.+..+..++..++..+....--+..-|+++....++.++..+.-.. .++.+..+.--++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 88999999998888999999999988888888888888888777666553221 12222223334555555
Q ss_pred ccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCC----c-hhHHHHHhhHHHHHHHHHHhhc
Q 021634 98 VGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGG----W-GWRVSLALAAVPASILTLGALF 172 (310)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~-~wr~~~~~~~~~~~~~~~~~~~ 172 (310)
.+..+-+...+.+|..|+..-|...++.....++|..++..++..+.+..+. + +-.+..++..+..++.+....+
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~l 411 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFL 411 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 5566667777899999999999999999999999988888887776654331 1 2234445555555555555556
Q ss_pred ccCCc
Q 021634 173 LPETP 177 (310)
Q Consensus 173 ~~es~ 177 (310)
+|+..
T Consensus 412 Lp~~~ 416 (433)
T PF03092_consen 412 LPPQK 416 (433)
T ss_pred cCCCc
Confidence 77653
No 256
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=96.92 E-value=0.25 Score=43.41 Aligned_cols=119 Identities=8% Similarity=-0.009 Sum_probs=82.3
Q ss_pred cchhHHHHHHHHHHH-HHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhh---------hh--------------
Q 021634 28 FDSQLLTSFTSSLYV-AGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA---------VN-------------- 83 (310)
Q Consensus 28 ~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~---------~~-------------- 83 (310)
.+++.+..+-+..-+ +..+..++.+.+.++..|.+++-.....+....+++++. ++
T Consensus 58 ~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~ 137 (509)
T COG3202 58 QGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMF 137 (509)
T ss_pred CcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCcc
Confidence 346667888888877 667888999999999999999877766666666665542 11
Q ss_pred ---------HHHHHHHHHHHhhccccccc-chhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhccc
Q 021634 84 ---------VYMLIFGRLLLGVGVGFANQ-SVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQI 146 (310)
Q Consensus 84 ---------~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 146 (310)
.|...+..+..=+-.+...+ .-.....|.+..+|-.|..++++.+.+++..+++.+..++...
T Consensus 138 l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 138 LKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred ceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 12222222222221222222 3456678999989999999999999999999988887777653
No 257
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.69 E-value=0.076 Score=46.81 Aligned_cols=52 Identities=10% Similarity=0.194 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHH
Q 021634 83 NVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFI 139 (310)
Q Consensus 83 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 139 (310)
.++..++.-++.|++.+..+.....+.+ .+|++. +..+..+.+++++++..+
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~~----~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPSTY----SSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHHH----HHHHHhcchhHHHHHHHH
Confidence 5667777788889988888888888655 566553 444455555555554444
No 258
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.63 E-value=0.067 Score=47.03 Aligned_cols=105 Identities=22% Similarity=0.323 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHh---hhCchhHHHHHHHHHHHHHHHhhhh------------------hhHHHHHHHHH
Q 021634 34 TSFTSSLYVAGLVASFVASSVTR---AFGRKPSVLMGGAAFLAGSALGGAA------------------VNVYMLIFGRL 92 (310)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~g~l~d---r~Grr~~~~~~~~~~~~~~~~~~~~------------------~~~~~l~~~r~ 92 (310)
+.-.-...++..+++.+.+.+.+ ++||++.+.++..+-.++.++.... +++...++.-+
T Consensus 282 ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~ 361 (461)
T KOG3098|consen 282 AIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGF 361 (461)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHH
Confidence 33334444555666677777765 5799999999988888887765542 24567777889
Q ss_pred HHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHH
Q 021634 93 LLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFI 139 (310)
Q Consensus 93 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 139 (310)
+.|++-++.......++.+.+ +++|..+.++...-..++..++...
T Consensus 362 l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~ 407 (461)
T KOG3098|consen 362 LLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFF 407 (461)
T ss_pred HHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999 6778888888777777776654444
No 259
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.57 E-value=0.036 Score=48.66 Aligned_cols=43 Identities=9% Similarity=-0.017 Sum_probs=28.4
Q ss_pred ccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHH
Q 021634 98 VGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFIN 140 (310)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 140 (310)
++.--.++-...-.+..+++++.+...-..+.+.|..++..+-
T Consensus 132 ~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvF 174 (544)
T PF13000_consen 132 CATQDIAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVF 174 (544)
T ss_pred HccCCceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHH
Confidence 3333344444555566788888888888888888877766553
No 260
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=96.51 E-value=0.057 Score=45.80 Aligned_cols=118 Identities=14% Similarity=0.059 Sum_probs=67.0
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHh-----hhCchhHHHH-HHHHHHHHHHHhhh-----------hh
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTR-----AFGRKPSVLM-GGAAFLAGSALGGA-----------AV 82 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r~Grr~~~~~-~~~~~~~~~~~~~~-----------~~ 82 (310)
|.+-+.-|.|-++.+....++.= .---++|.++.| |+||||.-++ +..+.+..+...+. .+
T Consensus 54 P~lL~ak~vSyt~~a~fS~ay~P--~sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p 131 (510)
T KOG3574|consen 54 PLLLQAKGVSYTSQAIFSFAYWP--FSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLP 131 (510)
T ss_pred HHHhcCCCcchhhhhhhhhhhhH--HHHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCc
Confidence 44444556666665544433221 223578999999 9999986543 22222222222221 13
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHH
Q 021634 83 NVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFI 139 (310)
Q Consensus 83 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 139 (310)
+...+...-++.-+.++..-...-...-.+..+++-|-+...-..+...|.+++..+
T Consensus 132 ~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 132 NVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVV 188 (510)
T ss_pred chHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcce
Confidence 333333344555555555555555666667778888888877777777777776555
No 261
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.48 E-value=0.013 Score=50.52 Aligned_cols=149 Identities=12% Similarity=0.013 Sum_probs=87.7
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhC-chhHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHhhccccc
Q 021634 27 KFDSQLLTSFTSSLYVAGLVASFVASSVTRAFG-RKPSVLMGGAAFLAGSALGGAA----VNVYMLIFGRLLLGVGVGFA 101 (310)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-rr~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~ 101 (310)
|.+....|+...+..++.++++.+.|.++||.. -|.+.++......++....... ...+.+...-.+.|.+....
T Consensus 297 gY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~ 376 (480)
T KOG2563|consen 297 GYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGY 376 (480)
T ss_pred cCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCC
Confidence 445577899999999999999999999999986 4666666666666663322221 23344556667788888888
Q ss_pred ccchhhhhhhcccccchhhhhhHHHH-HHHHHHHHHHHHHhhhcccCCCchhHHHH-HhhHHHHHHHHHHhhcccCC
Q 021634 102 NQSVPLYLSEMAPARYRGAINNGFQF-SIGIGALAANFINYGTEQIKGGWGWRVSL-ALAAVPASILTLGALFLPET 176 (310)
Q Consensus 102 ~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~wr~~~-~~~~~~~~~~~~~~~~~~es 176 (310)
.|+...+-.|..-|..-+...|+... +...|..+.-..+........ .+|.... +......++...+..+++|+
T Consensus 377 ~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 377 LPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGP-PGNTFPANIFLTVSALLGAILVAFFRPD 452 (480)
T ss_pred CCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCC-CCCCccchhHhHHHHHHHHHHHhhhhhh
Confidence 89888888887544433444555443 333343333333333332221 1343332 33333334444444555544
No 262
>PRK03612 spermidine synthase; Provisional
Probab=96.46 E-value=0.11 Score=46.89 Aligned_cols=118 Identities=13% Similarity=-0.008 Sum_probs=67.2
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHH---HHHh----hhhhhH-HHHHHHHHHHhh
Q 021634 25 YCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAG---SALG----GAAVNV-YMLIFGRLLLGV 96 (310)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~---~~~~----~~~~~~-~~l~~~r~l~G~ 96 (310)
-+|-+....+.+.+++..|.++|+.+.+++.++--|+.. ..-..+..++ ..+. .+.... ..+...-++.++
T Consensus 44 ~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~ 122 (521)
T PRK03612 44 LLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGL 122 (521)
T ss_pred HhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456678888999999999999999999988744333322 1111111111 1111 111111 122333456677
Q ss_pred cccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhc
Q 021634 97 GVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE 144 (310)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~ 144 (310)
..|+..|....+..+... ++-++..|-......+|.++|.++.+++.
T Consensus 123 l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vL 169 (521)
T PRK03612 123 LIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLL 169 (521)
T ss_pred HHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHH
Confidence 777777776665554332 22345566677777777777777755443
No 263
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.45 E-value=0.075 Score=46.55 Aligned_cols=125 Identities=18% Similarity=0.174 Sum_probs=91.3
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhh------hh----hHHHHHHHHHHHhh
Q 021634 27 KFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA------AV----NVYMLIFGRLLLGV 96 (310)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~------~~----~~~~l~~~r~l~G~ 96 (310)
|+++..++..-+...+....+.+...++.+|+|..+.=+.+.....++..++.. .+ +...++.+-.+.-+
T Consensus 289 G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~ 368 (432)
T PF06963_consen 289 GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRI 368 (432)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999888777776655544433322 12 33344444455555
Q ss_pred cccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchh
Q 021634 97 GVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGW 152 (310)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w 152 (310)
|.=+.--....++.|..|+++||...+.-....++-.++...++.... .+++++|
T Consensus 369 GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~-~P~~F~~ 423 (432)
T PF06963_consen 369 GLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFP-RPSQFGW 423 (432)
T ss_pred HHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccC-ChHhcCh
Confidence 655566677788999999999999999988888888777766654333 3334444
No 264
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.39 E-value=0.051 Score=47.70 Aligned_cols=142 Identities=15% Similarity=0.096 Sum_probs=94.0
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCch---h----HHHHHHHHHHHHHHHhhhh----------hhHHHHH
Q 021634 26 CKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRK---P----SVLMGGAAFLAGSALGGAA----------VNVYMLI 88 (310)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr---~----~~~~~~~~~~~~~~~~~~~----------~~~~~l~ 88 (310)
++++++ +..+...+.-++.+++..++-.+.++| + -+-+++.+.+.+.++.... .+.+.++
T Consensus 322 ~~vp~~---~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~li 398 (498)
T COG3104 322 FEVPPA---WFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLV 398 (498)
T ss_pred eecCHH---HHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHH
Confidence 344444 455666666667777777776664443 1 2334555555554433322 3578888
Q ss_pred HHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcc---cCCCchhHHHHHhhHHHHHH
Q 021634 89 FGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQ---IKGGWGWRVSLALAAVPASI 165 (310)
Q Consensus 89 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~wr~~~~~~~~~~~~ 165 (310)
...+++++|+=+..++..++++...|++-.+.+++++......|..++..++..... ......-...|+..+...++
T Consensus 399 l~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~ 478 (498)
T COG3104 399 LSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIV 478 (498)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988888888777663221 11112344556666666655
Q ss_pred HHHHh
Q 021634 166 LTLGA 170 (310)
Q Consensus 166 ~~~~~ 170 (310)
..+..
T Consensus 479 ~~~~~ 483 (498)
T COG3104 479 IGILL 483 (498)
T ss_pred HHHHH
Confidence 54443
No 265
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.29 E-value=0.0076 Score=53.12 Aligned_cols=62 Identities=10% Similarity=0.137 Sum_probs=49.2
Q ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHH-HHHHHHHHhhhh
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGA-AFLAGSALGGAA 81 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~-~~~~~~~~~~~~ 81 (310)
+...+.+|+++.+.+.+++.--+..+++.|++|+++|||-+||.++++.+ ....++++..+.
T Consensus 35 ~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~fv 97 (618)
T KOG3762|consen 35 AVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLVFV 97 (618)
T ss_pred HHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHheeec
Confidence 34567889999999999999999999999999999999986666555544 455555655554
No 266
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.17 E-value=0.073 Score=45.95 Aligned_cols=116 Identities=9% Similarity=0.017 Sum_probs=83.4
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHH-----HHHhhhhhhHHHHHHHHHHHhhcccc
Q 021634 26 CKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAG-----SALGGAAVNVYMLIFGRLLLGVGVGF 100 (310)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~r~l~G~~~~~ 100 (310)
+.-.+++..+....+.+|-.++.--...+ |+ |++.+...+...-. ....-+.++.|..++.-+..|+..|.
T Consensus 276 ~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa 351 (402)
T PF02487_consen 276 FFSPRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGA 351 (402)
T ss_pred CCCHHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhH
Confidence 33346777888888888776664332221 33 33333333322222 22233457889888889999999999
Q ss_pred cccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcc
Q 021634 101 ANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQ 145 (310)
Q Consensus 101 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 145 (310)
.+.-....+.|-.|+++|..+++....+.++|.+++..++..+..
T Consensus 352 ~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le~ 396 (402)
T PF02487_consen 352 SYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLEP 396 (402)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 999999889999999999999999999999999999999876653
No 267
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=95.86 E-value=0.031 Score=49.20 Aligned_cols=71 Identities=10% Similarity=0.084 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhHHHHHHHcCCCchh-HHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 235 QLLMAMAIPFFQQVTGINVIAFYAPLLFRTIGLGRLK-VCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
..++++...++.. .-.......|++.++.|++.++ .+.+......+-.+..+++++ +.||+|.|+++..+.
T Consensus 28 ~~~~lC~fGF~~e--~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~Gl--LaDrlG~K~vL~l~~ 99 (511)
T TIGR00806 28 LVLYLCFYGFMAQ--FRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFL--LTDYLRYKPVLVLQA 99 (511)
T ss_pred HHHHHHHHHHHHH--hhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHH--HHHHhCchHHHHHHH
Confidence 3343333444433 3345566677777889999999 999999999999999999999 999999999988654
No 268
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.70 E-value=0.028 Score=36.71 Aligned_cols=56 Identities=18% Similarity=-0.053 Sum_probs=47.1
Q ss_pred HHHHHHhHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 251 INVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 251 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
-..+...+|...++.++|..+++++.+...++-.+|.+...+ +.++.++++.+..+
T Consensus 8 RFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~--~~~~~~~~~~~~~~ 63 (85)
T PF06779_consen 8 RFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASR--LPRHSRPRRLLRAG 63 (85)
T ss_pred HHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHhcccHHHHHHHH
Confidence 345677899999999999999999999999999999999998 77776666666554
No 269
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=95.53 E-value=0.013 Score=54.37 Aligned_cols=68 Identities=7% Similarity=-0.067 Sum_probs=54.6
Q ss_pred HHHHHHHHhhhHHHHHHhHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 240 MAIPFFQQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
..+..+.+..........++.+-++++++..+.+++.+...++..++.++.++ +.||.+||+++.+|+
T Consensus 38 ~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~--~~~r~~r~~~i~~g~ 105 (633)
T TIGR00805 38 LTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSY--FGTKLHRPIVIGIGC 105 (633)
T ss_pred HHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHH--hhcccCcceEEEecH
Confidence 33344555444455666677777888999999999999999999999999999 999999999887764
No 270
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=95.18 E-value=0.12 Score=43.66 Aligned_cols=46 Identities=13% Similarity=-0.026 Sum_probs=39.5
Q ss_pred HHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhh
Q 021634 260 LLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 307 (310)
Q Consensus 260 ~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~ 307 (310)
..+++.|++..+.+.++....+...+...+.|. +.||+|||+..+.
T Consensus 59 ~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~--laD~~Grk~~cl~ 104 (354)
T PF05631_consen 59 ALYESYGFSEHQIAILFVAGFASSAIFGTFVGS--LADRYGRKKACLL 104 (354)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHhcCchHHHHH
Confidence 444788999999999999998888888888888 8999999987654
No 271
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=94.72 E-value=0.087 Score=42.50 Aligned_cols=61 Identities=15% Similarity=0.069 Sum_probs=51.3
Q ss_pred HHhhhHHHHHHhHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 246 QQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
......+.+..|.|.+-++.|+++++...+.....++..+| +..|. +.|++|.+.++.+|.
T Consensus 13 ~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~--l~d~~gp~~~l~iG~ 73 (250)
T PF06813_consen 13 LCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGL--LYDRFGPWVVLLIGA 73 (250)
T ss_pred HhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHH--HHHhcchHHHHHHHH
Confidence 33445677899999999999999999999999999998876 67788 899999999887653
No 272
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=94.63 E-value=1 Score=38.95 Aligned_cols=35 Identities=14% Similarity=0.122 Sum_probs=23.7
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhcccccch
Q 021634 83 NVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYR 118 (310)
Q Consensus 83 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r 118 (310)
.+...++.-.+.+.+.+..+.......++ +|+|.-
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~yt 150 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYT 150 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHH
Confidence 45566667777888888877777775555 555544
No 273
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.15 E-value=0.026 Score=47.37 Aligned_cols=43 Identities=16% Similarity=0.300 Sum_probs=0.0
Q ss_pred HHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHH
Q 021634 92 LLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFI 139 (310)
Q Consensus 92 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 139 (310)
++.|.+.+..+.....+.+. +|++. +..+..+.++++++..++
T Consensus 5 ~~~~~~~~~~q~s~~glas~-~p~~y----~~a~~~Gq~~aGv~~s~l 47 (309)
T PF01733_consen 5 ALIGFANAVLQSSLFGLASL-FPPKY----TQAVMIGQGLAGVIVSLL 47 (309)
T ss_dssp ------------------------------------------------
T ss_pred EEEHhhhHHHhccHHHHHhc-CCHHH----HHHHHhhccHHHHHHHHH
Confidence 45666677777777776554 66544 344445555555554444
No 274
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=92.02 E-value=0.39 Score=42.02 Aligned_cols=56 Identities=9% Similarity=-0.089 Sum_probs=45.2
Q ss_pred HHHHHhHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 252 NVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 252 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
+.+-...+..-+..+.++...+++.....+...++.++.|+ +.||+.|++++.+|.
T Consensus 50 ~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gy--LadryNR~~v~~vG~ 105 (493)
T KOG1330|consen 50 YTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGY--LADRYNRKRVIAVGI 105 (493)
T ss_pred hhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHH--HHhhcCcceEEeeHH
Confidence 33333344433445899999999999999999999999999 999999999988764
No 275
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=90.31 E-value=1.1 Score=37.22 Aligned_cols=77 Identities=13% Similarity=0.057 Sum_probs=62.0
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhc
Q 021634 68 GAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE 144 (310)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~ 144 (310)
.+++.+...+..+.++++..++.-+.-|+-.|..+.-..--+.+-.++++|-.+++....+.+.|..++..++..+.
T Consensus 326 Nl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalplh 402 (409)
T KOG3880|consen 326 NLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPLH 402 (409)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccch
Confidence 33444445566678999999999999999888888777766777788899999999999999999999988865443
No 276
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=89.90 E-value=9 Score=30.82 Aligned_cols=27 Identities=4% Similarity=0.087 Sum_probs=16.7
Q ss_pred HhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 280 ECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 280 ~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
.+|..++.+-+-+ ++.|+..|++.+.|
T Consensus 250 ~lCT~lAVigGk~--lAskIS~rtVt~~g 276 (294)
T KOG2881|consen 250 ALCTGLAVIGGKY--LASKISVRTVTLIG 276 (294)
T ss_pred HHHHHHHHhhhHH--HhhhheeEEEEEec
Confidence 3344444444445 78888888776654
No 277
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=88.90 E-value=0.35 Score=38.90 Aligned_cols=57 Identities=12% Similarity=0.127 Sum_probs=35.8
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHhhhc-c--cCCCchhHHHHHhhHHHHHHHHHHhhcc
Q 021634 116 RYRGAINNGFQFSIGIGALAANFINYGTE-Q--IKGGWGWRVSLALAAVPASILTLGALFL 173 (310)
Q Consensus 116 ~~r~~~~~~~~~~~~~g~~~~~~~~~~~~-~--~~~~~~wr~~~~~~~~~~~~~~~~~~~~ 173 (310)
++|+..+.....+.++|.++....- ... + ......|++++.+.+++.++-++++.++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF-~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPF-LISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhH-HhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5677777777788888877654331 122 1 1112369999988887777666665544
No 278
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=86.83 E-value=11 Score=30.53 Aligned_cols=103 Identities=14% Similarity=0.109 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHhh-hCchhHHH----HHHHHHHHHHHHhhh-h----hhHHHHHHHHHHHhhcccccc
Q 021634 33 LTSFTSSLYVAGLVASFVASSVTRA-FGRKPSVL----MGGAAFLAGSALGGA-A----VNVYMLIFGRLLLGVGVGFAN 102 (310)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~g~l~dr-~Grr~~~~----~~~~~~~~~~~~~~~-~----~~~~~l~~~r~l~G~~~~~~~ 102 (310)
.....-++..+..+|....|+.... +-||+.+. .++++..+..+.... . .+...+++.-++.|.+.=+.+
T Consensus 143 ~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ 222 (267)
T PF07672_consen 143 IPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQ 222 (267)
T ss_pred hHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 3555666677777888888888764 45666544 334444444443211 1 246677888889998865555
Q ss_pred cchhhhhhhcccccchhhhhhHHHHHHHHHHHHH
Q 021634 103 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAA 136 (310)
Q Consensus 103 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 136 (310)
++...+-.|. +..++-+.--.++..+++|.++-
T Consensus 223 ~ViL~lPhEy-K~~~pk~ig~~Fg~iWGfGY~~y 255 (267)
T PF07672_consen 223 GVILNLPHEY-KGYNPKKIGIQFGLIWGFGYIFY 255 (267)
T ss_pred HHHhcChhhh-cCCCcceehhHHHHHHHHHHHHH
Confidence 5555444443 22223333344555666665543
No 279
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=86.72 E-value=18 Score=30.60 Aligned_cols=74 Identities=22% Similarity=0.243 Sum_probs=55.3
Q ss_pred HHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccchhhhhhhccc
Q 021634 40 LYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAP 114 (310)
Q Consensus 40 ~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~ 114 (310)
..+..+.++++.+.+..++|-|.++.++.......-. .-+-+.+..++-.-...|++.++.+..-.+|+++.-.
T Consensus 67 ~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA-~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 67 LYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA-ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hhcchhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 3445566777777899999999999887776544322 2234677888899999999999998888888776643
No 280
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=86.59 E-value=5.3 Score=27.19 Aligned_cols=42 Identities=19% Similarity=0.134 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHhhh-CchhHHHHHHHHHHHH
Q 021634 33 LTSFTSSLYVAGLVASFVASSVTRAF-GRKPSVLMGGAAFLAG 74 (310)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~~~ 74 (310)
...-.+.-+++..+.....||+.||| |-++..++..++...+
T Consensus 44 ~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~ 86 (116)
T COG5336 44 QAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFG 86 (116)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 34445666777777788889999998 6777666555544443
No 281
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=85.64 E-value=16 Score=30.06 Aligned_cols=132 Identities=15% Similarity=0.047 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHhhhCch--hHHHHHHHHHHHHHHHhhh----hh---hHHHHHHHHHHHhhccccccc
Q 021634 33 LTSFTSSLYVAGLVASFVASSVTRAFGRK--PSVLMGGAAFLAGSALGGA----AV---NVYMLIFGRLLLGVGVGFANQ 103 (310)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~g~l~dr~Grr--~~~~~~~~~~~~~~~~~~~----~~---~~~~l~~~r~l~G~~~~~~~~ 103 (310)
-|.+.+.++++.++|+-+..++..|-..| +.+.+.....++...+... ++ +...-+++-++.-.++|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 47788899999999999998888776554 3444444433333322221 11 222224444555567788999
Q ss_pred chhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCC--CchhHHHHHhhHHHHHHHHHH
Q 021634 104 SVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKG--GWGWRVSLALAAVPASILTLG 169 (310)
Q Consensus 104 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~wr~~~~~~~~~~~~~~~~ 169 (310)
....+-+.+.|.+.|+..+.++-.-..+-..++ + .....+ ..+-|..|-++.+...+..+.
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClv--L---ynlh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLV--L---YNLHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhh--h---eecccccCccccchhhhhhHHHHHHHHHH
Confidence 999999999999999887777654433322221 1 111111 124566777766666555433
No 282
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=85.56 E-value=2.5 Score=37.13 Aligned_cols=80 Identities=18% Similarity=0.092 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccchhhhhhh
Q 021634 32 LLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSE 111 (310)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~ 111 (310)
.-.|=..++.+...+.+.....+.||+|-|+.+..+...+.++..+.+...+.+....-+-..|+-.+....+-...+++
T Consensus 333 ~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~ 412 (498)
T KOG0637|consen 333 MGCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALAL 412 (498)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHH
Confidence 33555667778888999999999999997777777777788888888888888888888888886555555554444443
No 283
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=84.13 E-value=7.6 Score=34.45 Aligned_cols=63 Identities=11% Similarity=0.064 Sum_probs=51.7
Q ss_pred hhHHHHHHHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhc
Q 021634 82 VNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE 144 (310)
Q Consensus 82 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~ 144 (310)
++-+..++..++.|+..|-..+....+..+..++++|..+..+...+..+|..+|..++..+.
T Consensus 370 ~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~~ 432 (437)
T TIGR00939 370 PGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLFV 432 (437)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355666677899999888888888888888899999999999999999999888888765443
No 284
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=82.91 E-value=7.7 Score=33.92 Aligned_cols=96 Identities=10% Similarity=0.022 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHH--HHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccchhhhh
Q 021634 32 LLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVL--MGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYL 109 (310)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~ 109 (310)
--|.+-.+..+..+++++..|++..++.+-.-+. ...++.+...++++..++.|...++-++.+.......+....-+
T Consensus 286 YNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qI 365 (412)
T PF01770_consen 286 YNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQI 365 (412)
T ss_pred cchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3477788888888999999999977777654444 34444455556677888999988888887776666666666666
Q ss_pred hhcccccchhhhhhHHHH
Q 021634 110 SEMAPARYRGAINNGFQF 127 (310)
Q Consensus 110 ~~~~~~~~r~~~~~~~~~ 127 (310)
+.....+.-+..+|+...
T Consensus 366 A~~l~~e~yaLVFGiNtf 383 (412)
T PF01770_consen 366 AKNLSEERYALVFGINTF 383 (412)
T ss_pred HHhccccceeeeeeeHHH
Confidence 666655555665555443
No 285
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=81.12 E-value=4.6 Score=33.73 Aligned_cols=133 Identities=11% Similarity=0.051 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccchhhhhhhcc
Q 021634 34 TSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMA 113 (310)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~ 113 (310)
+.+.-.-.+-..+..+.+....||+---.=..+..++.+.+.++.+++++.++-+.+-.+..++.|.....-..+ +..+
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~l-ss~Y 143 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLAL-SSRY 143 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhh-hccC
Confidence 333344444555666666777787643322344556677777888899999998888888888877766655553 3334
Q ss_pred cccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhc
Q 021634 114 PARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF 172 (310)
Q Consensus 114 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~ 172 (310)
++.. .+.++.+.+..+++|..--.++.+.. +..-|...++...+-++....+++
T Consensus 144 ~~~~----i~~WSSGTGgAGliGa~SYa~lT~~~-~~spk~Tlli~l~lP~lfa~~yf~ 197 (409)
T KOG3880|consen 144 PSIV----IAGWSSGTGGAGLIGASSYAFLTSWA-NLSPKSTLLIMLFLPALFAFAYFF 197 (409)
T ss_pred CCce----eccccCCCCcchhhhhhHHHHHhhhc-CCChhhHHHHHHHHHHHHHHHHHh
Confidence 3332 23333333333444433322344322 234566666644444444444444
No 286
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=79.09 E-value=24 Score=30.82 Aligned_cols=108 Identities=16% Similarity=0.107 Sum_probs=69.5
Q ss_pred HHHHHHH-HHHHHHHHHhhhHHHHhhhCchhHHHHHHH-HHHHHHHH-h------hhhhhHHHHHHHHHHHhhccccccc
Q 021634 33 LTSFTSS-LYVAGLVASFVASSVTRAFGRKPSVLMGGA-AFLAGSAL-G------GAAVNVYMLIFGRLLLGVGVGFANQ 103 (310)
Q Consensus 33 ~~~~~~~-~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~-~~~~~~~~-~------~~~~~~~~l~~~r~l~G~~~~~~~~ 103 (310)
...+..+ +.+...+|.+.+.++-++= ||.......+ ...+-.+. | ..-.+-+.++....+.|+..|=..+
T Consensus 284 ~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYlts 362 (406)
T KOG1479|consen 284 ALLLVFLSFNVFDLIGSILAALLTWPD-PRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTS 362 (406)
T ss_pred HHHHHHHHhHHHHHhhhhhhhcccCCC-CceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhh
Confidence 3444555 7788888877776655433 3333222221 12222222 2 1234566777788999998888778
Q ss_pred chhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHh
Q 021634 104 SVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINY 141 (310)
Q Consensus 104 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 141 (310)
+...+..+-.|++++-.+-.+.......|...|..+++
T Consensus 363 l~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~ 400 (406)
T KOG1479|consen 363 LIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSW 400 (406)
T ss_pred heehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 88888888899988888777777787778777776643
No 287
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=78.45 E-value=7.2 Score=29.00 Aligned_cols=60 Identities=8% Similarity=-0.110 Sum_probs=37.3
Q ss_pred hhhHHHHHHhHHHHHHHcC------CCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhcc
Q 021634 248 VTGINVIAFYAPLLFRTIG------LGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 309 (310)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~g------~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~~ 309 (310)
+.++.........++++.+ .++.....-.++......++.++.+. +.+++|.|+.+++|.
T Consensus 9 Ftaf~t~~~i~~svi~s~~~~~~~~i~~~~G~~slai~Y~~~~~s~l~~P~--iv~~lg~K~sm~lg~ 74 (156)
T PF05978_consen 9 FTAFQTQSFIQESVIHSVHERNPSSISAGLGYYSLAILYGSFAISCLFAPS--IVNKLGPKWSMILGS 74 (156)
T ss_pred HHHHhhhhHHHHHHHHHHhhcCcccccccccHHHHHHHHHHHHHHHHhHHH--HHHHHhhHHHHHHHH
Confidence 3344444444444444332 23334444555566667778888888 899999999988763
No 288
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=76.90 E-value=3.6 Score=33.38 Aligned_cols=53 Identities=17% Similarity=0.095 Sum_probs=40.5
Q ss_pred HHHHHhHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHH-------HHHHHhccchh
Q 021634 252 NVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWV-------KWMNRVRWRKL 304 (310)
Q Consensus 252 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~-------~l~d~~g~r~~ 304 (310)
.....|+-.++++.|.++...+.++.+..+...+..++.|.. .-.||+|||+.
T Consensus 34 ScWFTYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~ 93 (412)
T KOG4830|consen 34 SCWFTYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMS 93 (412)
T ss_pred HHHHHHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceee
Confidence 445556667778999999999998888888888887776531 14799999875
No 289
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=75.89 E-value=1.1 Score=39.79 Aligned_cols=50 Identities=12% Similarity=-0.118 Sum_probs=39.6
Q ss_pred HHHHHHH--cCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhcc-chhhhhcc
Q 021634 258 APLLFRT--IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRW-RKLDIYTL 309 (310)
Q Consensus 258 ~~~~~~~--~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~-r~~~~~~~ 309 (310)
.-.|+++ .+.+.+..|+..+...++..++.++.++ ...|.+. |+.+++|+
T Consensus 57 ~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~--Ws~k~~~~k~Pli~s~ 109 (488)
T KOG2325|consen 57 MWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGI--WSNKTGSVKKPLIVSF 109 (488)
T ss_pred cchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcc--cccccCCcccCHHHHH
Confidence 3356666 5778888999999999999999999998 8888874 56665553
No 290
>COG1288 Predicted membrane protein [Function unknown]
Probab=70.93 E-value=61 Score=28.62 Aligned_cols=30 Identities=20% Similarity=0.251 Sum_probs=19.9
Q ss_pred CCchhHHHHHhhHHHHHHHHHHhhc--ccCCc
Q 021634 148 GGWGWRVSLALAAVPASILTLGALF--LPETP 177 (310)
Q Consensus 148 ~~~~wr~~~~~~~~~~~~~~~~~~~--~~es~ 177 (310)
+..+||...|+......+..+.++- ++++|
T Consensus 214 sG~~~Riv~~v~~~~~~i~y~~~Ya~KvkkdP 245 (481)
T COG1288 214 SGMGLRIVVWVVFTLISIIYVYWYASKVKKDP 245 (481)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 4468999999877776666555543 44444
No 291
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=69.26 E-value=88 Score=28.23 Aligned_cols=71 Identities=11% Similarity=0.231 Sum_probs=43.4
Q ss_pred HHHhhcccccccchhhhhhhcccc-cchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHH
Q 021634 92 LLLGVGVGFANQSVPLYLSEMAPA-RYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASI 165 (310)
Q Consensus 92 ~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~ 165 (310)
++.|+.....+..--..+.|.+|. ++|+..++-++...++..++..+++..+. ...||+....+.-++.++
T Consensus 274 i~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~---~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 274 IAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVI---RKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHH
Confidence 334444455555555667777764 56788888888777777655555543232 346898776665544444
No 292
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=67.95 E-value=26 Score=31.58 Aligned_cols=47 Identities=6% Similarity=0.029 Sum_probs=35.7
Q ss_pred HHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHH
Q 021634 89 FGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALA 135 (310)
Q Consensus 89 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 135 (310)
+...+..+..-..+....+.-+.+.+|.--|+.|.+.+...++|+--
T Consensus 410 ~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtW 456 (544)
T PF13000_consen 410 IQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTW 456 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCc
Confidence 34555556556667777788888999999999999999888887643
No 293
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=67.82 E-value=34 Score=25.27 Aligned_cols=80 Identities=19% Similarity=0.147 Sum_probs=46.3
Q ss_pred HHHhhhCchhHHHHHH------HHHHHHHHHhhh----hhhHHHHHHHHHHHhhcccccccchhhhhhhcccccchhhhh
Q 021634 53 SVTRAFGRKPSVLMGG------AAFLAGSALGGA----AVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAIN 122 (310)
Q Consensus 53 ~l~dr~Grr~~~~~~~------~~~~~~~~~~~~----~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~ 122 (310)
.++||.-||..+..|. ..+.++..+..- .+++..++..-.+-|+| ...+.+..++--+++++-|...
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~g---llGisYGilSaSWD~~r~GSll 132 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLG---LLGISYGILSASWDPEREGSLL 132 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHH---HHhhhhhhcccccCCCCCCCcc
Confidence 4677877776654433 222222222211 13444555544444443 3445566677778888889999
Q ss_pred hHHHHHHHHHHHH
Q 021634 123 NGFQFSIGIGALA 135 (310)
Q Consensus 123 ~~~~~~~~~g~~~ 135 (310)
|+-..-.+++.+.
T Consensus 133 G~~e~~~N~~r~~ 145 (153)
T PF11947_consen 133 GWEEFKRNWGRMW 145 (153)
T ss_pred cHHHHHHhHHHHH
Confidence 9988887777654
No 294
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=66.79 E-value=16 Score=29.53 Aligned_cols=55 Identities=25% Similarity=0.126 Sum_probs=40.9
Q ss_pred HHHHHhHHHHHHHcCCCc--hhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 252 NVIAFYAPLLFRTIGLGR--LKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 252 ~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
.......+.+..+.+.+. ...+.......+...++.+..+. +.||.|||+.++.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--l~d~~g~~~~~~~~ 75 (338)
T COG0477 19 GLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGP--LGDRYGRRKVLIIG 75 (338)
T ss_pred chHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhh--ccccccchHHHHHH
Confidence 344555666666665555 47788888888888888888888 99999999776654
No 295
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=65.31 E-value=31 Score=23.98 Aligned_cols=42 Identities=14% Similarity=0.208 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHH
Q 021634 32 LLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLA 73 (310)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~ 73 (310)
..+.......++..++..+.+.+.|..|.+..+.+......+
T Consensus 88 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (141)
T TIGR00880 88 ALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALA 129 (141)
T ss_pred HHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHH
Confidence 345556666677777777777777777766665554444333
No 296
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=63.36 E-value=87 Score=26.04 Aligned_cols=58 Identities=12% Similarity=0.067 Sum_probs=33.2
Q ss_pred HHHHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcc
Q 021634 87 LIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQ 145 (310)
Q Consensus 87 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 145 (310)
.-..|.+.|+-. ..+..++++++-.||.+++--..-=...+.+++..+.+++|..+..
T Consensus 22 ~~~lr~~~g~~~-vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~~ 79 (287)
T PF07760_consen 22 IPPLRVILGFPF-VLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLNY 79 (287)
T ss_pred hhHHHHHHHHHH-HHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345677777654 3456678888888886544222222233444455556666665554
No 297
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=62.89 E-value=3.1 Score=32.73 Aligned_cols=100 Identities=13% Similarity=0.063 Sum_probs=57.7
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccccc
Q 021634 22 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFA 101 (310)
Q Consensus 22 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 101 (310)
+.+.||+|..+.--..+.|.+|..+|.++.+.++.-. ..+ +...-...-.-.|+|.|..
T Consensus 130 I~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~-------------------a~~--~~fhP~ALAMasGvGSgSM 188 (241)
T PF11299_consen 130 ISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLL-------------------ASL--GIFHPYALAMASGVGSGSM 188 (241)
T ss_pred eehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHH-------------------Hhc--cCCCHHHHHHHcCCcHHHH
Confidence 4566666666666666666666666666665544211 111 1011122234467777777
Q ss_pred ccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhh
Q 021634 102 NQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGT 143 (310)
Q Consensus 102 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 143 (310)
+.....-+.+.+| +......++....+.+..+.|-.+..++
T Consensus 189 MaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 189 MAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888777888886 5555566666666666666655554433
No 298
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=59.44 E-value=52 Score=25.24 Aligned_cols=24 Identities=13% Similarity=0.314 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHhhhHHHHhhhCc
Q 021634 37 TSSLYVAGLVASFVASSVTRAFGR 60 (310)
Q Consensus 37 ~~~~~~~~~~~~~~~g~l~dr~Gr 60 (310)
+.-|.+++.+.+.+.|+++||.-+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 355778888999999999999885
No 299
>KOG3146 consensus Dolichyl pyrophosphate phosphatase and related acid phosphatases [Lipid transport and metabolism]
Probab=58.96 E-value=86 Score=24.55 Aligned_cols=31 Identities=13% Similarity=0.212 Sum_probs=18.7
Q ss_pred hhhhhhhhhhHhhhc----cccccccccccchhHH
Q 021634 3 PFLEKFFPEVHRKMK----EDTKISNYCKFDSQLL 33 (310)
Q Consensus 3 ~f~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~ 33 (310)
+++|....++..+=. .+.++..++|++.+..
T Consensus 68 e~in~viK~il~qpRP~~~~~~t~~s~yGMPSSHS 102 (228)
T KOG3146|consen 68 EFINVVIKNILKQPRPVSFPDTTLRSGYGMPSSHS 102 (228)
T ss_pred HHHHHHHHHHhcCCCCCCCCccccccCCCCCchHH
Confidence 444444444444333 4567888999987664
No 300
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=58.75 E-value=26 Score=30.06 Aligned_cols=95 Identities=12% Similarity=0.098 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHhhhCchh--HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccchhhhhhh
Q 021634 34 TSFTSSLYVAGLVASFVASSVTRAFGRKP--SVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSE 111 (310)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~g~l~dr~Grr~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~ 111 (310)
|..-.+..+..+++.+..|++.-++.|.. .+.++.+..+...++++.++++|..+++.++-+.-.....++...-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 44556667778889999999988887763 3334444444455566677888888887777766666666677666777
Q ss_pred cccccchhhhhhHHHHH
Q 021634 112 MAPARYRGAINNGFQFS 128 (310)
Q Consensus 112 ~~~~~~r~~~~~~~~~~ 128 (310)
-...+.-|..+|+....
T Consensus 354 nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTFV 370 (433)
T ss_pred hhhhhhheeeeehHHHH
Confidence 77666667777665544
No 301
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=57.92 E-value=3.2 Score=34.87 Aligned_cols=107 Identities=13% Similarity=0.131 Sum_probs=3.5
Q ss_pred HHHHHHHHHHHHHhhhHHHHhh-hCchhHHHH--HHHHHHHHHHHhh----------hhhhHHHHHHHHHHHhhcccccc
Q 021634 36 FTSSLYVAGLVASFVASSVTRA-FGRKPSVLM--GGAAFLAGSALGG----------AAVNVYMLIFGRLLLGVGVGFAN 102 (310)
Q Consensus 36 ~~~~~~~~~~~~~~~~g~l~dr-~Grr~~~~~--~~~~~~~~~~~~~----------~~~~~~~l~~~r~l~G~~~~~~~ 102 (310)
....+.++-.+|..+.++..-+ -.+|++... .-+++....++|. ..++-+..++.-++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 4556777777888777653211 124444332 2222222222331 12344566677888999888888
Q ss_pred cchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhh
Q 021634 103 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYG 142 (310)
Q Consensus 103 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 142 (310)
+....+..+..++++|..+-.+...+..+|..+|..++..
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp HHHH------------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888999999999888888888888888888776543
No 302
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=57.25 E-value=1.1e+02 Score=25.05 Aligned_cols=24 Identities=4% Similarity=-0.160 Sum_probs=11.8
Q ss_pred hHHHHHhhHHHHHHHHHHhhcccC
Q 021634 152 WRVSLALAAVPASILTLGALFLPE 175 (310)
Q Consensus 152 wr~~~~~~~~~~~~~~~~~~~~~e 175 (310)
..+.-+++.++.++......+++.
T Consensus 114 ~~~Ln~~G~~l~~~~~~~f~fik~ 137 (254)
T PF07857_consen 114 SPWLNYIGVALVLVSGIIFSFIKS 137 (254)
T ss_pred hhHHHHHHHHHHHHHHHheeeecC
Confidence 344445555555555555555543
No 303
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=55.81 E-value=2.4e+02 Score=28.83 Aligned_cols=20 Identities=30% Similarity=0.609 Sum_probs=13.9
Q ss_pred hhHHHHHhhHHHHHHHHHHh
Q 021634 151 GWRVSLALAAVPASILTLGA 170 (310)
Q Consensus 151 ~wr~~~~~~~~~~~~~~~~~ 170 (310)
+||....+.+...++.....
T Consensus 807 ~W~lalv~la~~Pll~~~~~ 826 (1228)
T KOG0055|consen 807 GWRLALVVLATFPLLILSGY 826 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 69999888776666555433
No 304
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=54.81 E-value=1e+02 Score=24.08 Aligned_cols=37 Identities=11% Similarity=-0.054 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHhhhHHHH---hhhCchhHHHHHHHHHHH
Q 021634 37 TSSLYVAGLVASFVASSVT---RAFGRKPSVLMGGAAFLA 73 (310)
Q Consensus 37 ~~~~~~~~~~~~~~~g~l~---dr~Grr~~~~~~~~~~~~ 73 (310)
.....++..+|..+.+.+. ++..+|+.....+.+..+
T Consensus 52 ~~~~i~~F~~G~~~~~~i~~~~~~~~~~~~~~~~l~~~~~ 91 (209)
T PF06912_consen 52 YLLAILSFILGAFLAGLIVRRSRRRRRRRWYRILLLLEAI 91 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHH
Confidence 3444455566667777662 233344444444433333
No 305
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=53.58 E-value=81 Score=23.23 Aligned_cols=26 Identities=12% Similarity=0.169 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHhhhHHHHhhhCchh
Q 021634 37 TSSLYVAGLVASFVASSVTRAFGRKP 62 (310)
Q Consensus 37 ~~~~~~~~~~~~~~~g~l~dr~Grr~ 62 (310)
+.-+.++..+.+.+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 45577788888899999999988764
No 306
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=52.70 E-value=30 Score=32.01 Aligned_cols=63 Identities=14% Similarity=0.217 Sum_probs=53.4
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhcc
Q 021634 83 NVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQ 145 (310)
Q Consensus 83 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 145 (310)
|.++++--.++.|++.........-+..+-+|++-|+.+.+++....++|..+...+......
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~ 519 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQF 519 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666778999999998888888999999999999999999999999999988888654443
No 307
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=50.62 E-value=1.7e+02 Score=25.43 Aligned_cols=83 Identities=16% Similarity=-0.049 Sum_probs=54.0
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHH-----HHhhh----hhhHHHHHHHHHHHhhccc
Q 021634 29 DSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGS-----ALGGA----AVNVYMLIFGRLLLGVGVG 99 (310)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~-----~~~~~----~~~~~~l~~~r~l~G~~~~ 99 (310)
.--|.+.+.+.+...+.+|+...-++.|.--.-+.+..-.++..++. .-..| .++-+.+++...+.|.-.|
T Consensus 41 ~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG 120 (508)
T COG4262 41 GILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVLVG 120 (508)
T ss_pred ceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHHHh
Confidence 34567888999999999999888887775433322322222222221 11122 2466778888899998889
Q ss_pred ccccchhhhhhh
Q 021634 100 FANQSVPLYLSE 111 (310)
Q Consensus 100 ~~~~~~~~~~~~ 111 (310)
.-.|....++..
T Consensus 121 ~EiPL~mrml~~ 132 (508)
T COG4262 121 AEIPLLMRMLQR 132 (508)
T ss_pred cchHHHHHHHHH
Confidence 888888877655
No 308
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=48.73 E-value=74 Score=28.10 Aligned_cols=100 Identities=13% Similarity=0.104 Sum_probs=55.2
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhccccc
Q 021634 22 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFA 101 (310)
Q Consensus 22 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 101 (310)
+.... +++++...+.+...+...+++++-+...++.-|-+......+.............++.....+-++.|+.....
T Consensus 29 v~~~~-l~~~~~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~i~~~~~~~~~~~~~~~~g~~i~~gl~~~ll 107 (415)
T TIGR00801 29 VGLAP-LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAFVSPMIAIGSGLGIPAIMGALIATGLVYTLL 107 (415)
T ss_pred Hhccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 34555 79999999999999999999999988776542223322222222222222222223444444444455433222
Q ss_pred cc----chhhhhhhcccccchhhhh
Q 021634 102 NQ----SVPLYLSEMAPARYRGAIN 122 (310)
Q Consensus 102 ~~----~~~~~~~~~~~~~~r~~~~ 122 (310)
.. .....+.+.+|+.-.+...
T Consensus 108 ~~~~~~~~~~~i~~~~Pp~v~g~iv 132 (415)
T TIGR00801 108 SLLIKKLGPRWLMKLFPPVVTGPVV 132 (415)
T ss_pred HHHHHHhhHHHHHhcCCchhHHHhH
Confidence 11 1223457778887776533
No 309
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=48.09 E-value=6 Score=36.17 Aligned_cols=64 Identities=11% Similarity=-0.061 Sum_probs=0.0
Q ss_pred HHHHHhhhHHHHHHhHHHHHHHcCCCchhHHHHHHHHHhhhhhhhhHHHHHHHHHHhccchhhhhc
Q 021634 243 PFFQQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 308 (310)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~d~~g~r~~~~~~ 308 (310)
..+.+......+...++.+-++++++..+++.+.+..-++..+..++..+ +.+|-.|.+++-.|
T Consensus 11 ~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy--~g~~~hrprwig~g 74 (539)
T PF03137_consen 11 LGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSY--FGGRGHRPRWIGIG 74 (539)
T ss_dssp ------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HhhhcCCcceeeec
Confidence 33444444444555666666788999999999999999999999988888 78876665554443
No 310
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=47.95 E-value=78 Score=20.80 Aligned_cols=41 Identities=17% Similarity=0.033 Sum_probs=29.8
Q ss_pred HHHHHhhhHHHHhhhCc-------hhHHHHHHHHHHHHHHHhhhhhhH
Q 021634 44 GLVASFVASSVTRAFGR-------KPSVLMGGAAFLAGSALGGAAVNV 84 (310)
Q Consensus 44 ~~~~~~~~g~l~dr~Gr-------r~~~~~~~~~~~~~~~~~~~~~~~ 84 (310)
.....+.++++.+|.-+ ++.+.++.++...+.++++..+|.
T Consensus 31 ~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 31 ATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 34455666777776654 788888888888888888877654
No 311
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=46.33 E-value=47 Score=22.76 Aligned_cols=50 Identities=16% Similarity=0.018 Sum_probs=37.2
Q ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhh
Q 021634 31 QLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA 80 (310)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~ 80 (310)
+..|=.-..+.-.+.+.++++++..|+.-+-+.=.+|..+..++..+..+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 44566777888888899999999999887766666777766666655443
No 312
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=46.13 E-value=56 Score=28.51 Aligned_cols=97 Identities=10% Similarity=0.109 Sum_probs=46.8
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhh------hhhHHHHHHHHHHHh
Q 021634 22 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA------AVNVYMLIFGRLLLG 95 (310)
Q Consensus 22 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~r~l~G 95 (310)
+.+.+|. ..+...+.+...+...+++++-+. +.|.|..+.-|.....+....... ..++.....+-++.|
T Consensus 25 l~~~~g~-~~~~~~li~at~l~sgi~Tllq~~---~~g~~lpl~~G~s~~~~~~~~~~~g~~~~~~~~~~~~~g~~~i~g 100 (389)
T PF00860_consen 25 LAAAFGL-DADTAALISATFLVSGIATLLQGL---PAGHRLPLVPGPSFAFIFAFMIVIGMAESGGYGLQAALGAVLISG 100 (389)
T ss_dssp TTS------------HHHHHHHHHHHHHHHHH---HTTT-----EEE-GGGHHHHHGGG-----HHHHHHHHHHHHHHHH
T ss_pred Hhhcccc-cchhhHHHHHHHHHHHHHHHHHHh---cCCCceecccccchhhhhhhhcccccccchhhchhhhhhHHHHHH
Confidence 3344577 566668888888899999999888 788888877666665555333332 234555555566666
Q ss_pred hcccccccc-hhhhhhhcccccchhhhh
Q 021634 96 VGVGFANQS-VPLYLSEMAPARYRGAIN 122 (310)
Q Consensus 96 ~~~~~~~~~-~~~~~~~~~~~~~r~~~~ 122 (310)
+..-..... ....+.+++|+.-++...
T Consensus 101 i~~~~l~~~g~~~~l~~~~pp~v~g~v~ 128 (389)
T PF00860_consen 101 ILFILLGLTGLRKRLRRLFPPVVKGAVV 128 (389)
T ss_dssp HHHHHHHTT-SH-HHHHH--HHHHHHHH
T ss_pred HHHHHHHHhchHHHHHHHhChhheEeeE
Confidence 543222222 223677888887766543
No 313
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=45.79 E-value=69 Score=28.15 Aligned_cols=98 Identities=14% Similarity=0.107 Sum_probs=58.3
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhh-hhhhHHHHHHHHHHHhhcccc
Q 021634 22 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGG-AAVNVYMLIFGRLLLGVGVGF 100 (310)
Q Consensus 22 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~r~l~G~~~~~ 100 (310)
+.+..|+|+++...+.+...+...+++++..+-.-++|.|..+..+.....+...... ...++.....+-++.|+..-.
T Consensus 19 ~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga~~v~Gii~il 98 (406)
T TIGR03173 19 VGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGAVIVAGLFVIL 98 (406)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Confidence 3445689999999999999999999998875333357777766655554444433222 223444444455555543222
Q ss_pred cccchhhhhhhcccccchhh
Q 021634 101 ANQSVPLYLSEMAPARYRGA 120 (310)
Q Consensus 101 ~~~~~~~~~~~~~~~~~r~~ 120 (310)
.. .....+.+.+|+.-.|.
T Consensus 99 lg-~~~~~l~~~iPp~v~G~ 117 (406)
T TIGR03173 99 LA-PFFSKLVRFFPPVVTGT 117 (406)
T ss_pred HH-HHHHHHHHHCCcHHHHH
Confidence 11 23445677787755443
No 314
>KOG3312 consensus Predicted membrane protein [Function unknown]
Probab=45.42 E-value=49 Score=24.07 Aligned_cols=6 Identities=17% Similarity=0.163 Sum_probs=2.3
Q ss_pred cccCCc
Q 021634 172 FLPETP 177 (310)
Q Consensus 172 ~~~es~ 177 (310)
++..+.
T Consensus 29 lvYRt~ 34 (186)
T KOG3312|consen 29 LVYRTD 34 (186)
T ss_pred EEEehh
Confidence 344443
No 315
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=44.35 E-value=92 Score=29.47 Aligned_cols=59 Identities=15% Similarity=0.196 Sum_probs=45.8
Q ss_pred hHHHHHHHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHh
Q 021634 83 NVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINY 141 (310)
Q Consensus 83 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 141 (310)
+.+..+.--++.+++.........-.-.+-.|++.|....+++.+..++|.++...++.
T Consensus 564 ~~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~ 622 (654)
T TIGR00926 564 SILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAE 622 (654)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555677777777766666777778889999999999999999999998877754
No 316
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=43.35 E-value=1.7e+02 Score=26.20 Aligned_cols=101 Identities=12% Similarity=0.107 Sum_probs=63.6
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhh---hHHHHHHHHHHHhhc
Q 021634 21 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV---NVYMLIFGRLLLGVG 97 (310)
Q Consensus 21 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~ 97 (310)
-+..+++++.++...+.+...+...++.++.-....+.|-|-....+.-...++.+...... .....+.+-+..|+.
T Consensus 39 ivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~~~~~g~~~~~~~G~ii~ag~~ 118 (451)
T COG2233 39 LVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAIGGTTGDGIAALLGGIIAAGLV 118 (451)
T ss_pred HhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHHHHhccCCchHHHHHHHHHHHHH
Confidence 35678899999999999999999999999887755556656555555555555554443332 245555555555554
Q ss_pred ccccccchhhhhhhcccccchhhh
Q 021634 98 VGFANQSVPLYLSEMAPARYRGAI 121 (310)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~r~~~ 121 (310)
.-...+.....+...+||---|..
T Consensus 119 ~~li~~~~~~~l~rlfPPvVtG~V 142 (451)
T COG2233 119 YFLISPIVKIRLARLFPPVVTGPV 142 (451)
T ss_pred HHHHHHHHHHHHHHhCCCceEEeE
Confidence 322222222156677777666543
No 317
>PRK02237 hypothetical protein; Provisional
Probab=41.88 E-value=86 Score=21.58 Aligned_cols=49 Identities=14% Similarity=-0.023 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhh
Q 021634 32 LLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA 80 (310)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~ 80 (310)
..|=.-..+.-.+.+.++++++..|+.-+-+-=.+|..+..++..+..+
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 4666777888888889999999999887666556666666666554433
No 318
>COG4769 Predicted membrane protein [Function unknown]
Probab=39.59 E-value=56 Score=24.43 Aligned_cols=47 Identities=26% Similarity=0.270 Sum_probs=28.5
Q ss_pred HHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhh
Q 021634 44 GLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGV 96 (310)
Q Consensus 44 ~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 96 (310)
..+.+...-++..++|+|..-++|.- ..-++.+|..++.+.+++.+-
T Consensus 86 G~i~S~L~m~~l~~f~~k~~S~lgiS------~mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 86 GAILSTLFMYFLYQFGPKYLSLLGIS------VMGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHcCCceEeeeehh------hHHHHHHhHHHHHHHHHHHhc
Confidence 34444555566777887766433322 233567788888888877763
No 319
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=39.23 E-value=24 Score=29.78 Aligned_cols=26 Identities=31% Similarity=0.470 Sum_probs=13.6
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHHHHHh
Q 021634 113 APARYRGAINNGFQFSIGIGALAANFINY 141 (310)
Q Consensus 113 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 141 (310)
+|+..| .+.++.+.+.|++++.++..
T Consensus 210 WP~~mR---~gvyY~sig~~gfl~~IlvL 235 (372)
T KOG2927|consen 210 WPRRMR---QGVYYLSIGAGGFLAFILVL 235 (372)
T ss_pred CcHHHh---cceeeeecchhHHHHHHHHH
Confidence 554444 45555555555566555543
No 320
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=38.67 E-value=1.6e+02 Score=21.62 Aligned_cols=52 Identities=15% Similarity=0.101 Sum_probs=35.5
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHH-HHHHHHHHHHH
Q 021634 25 YCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVL-MGGAAFLAGSA 76 (310)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~-~~~~~~~~~~~ 76 (310)
+.|+++...--...+.++.-.++-++...++|+.++-..+. ++.++..+..+
T Consensus 66 eiGi~EkslL~sA~LvYi~PL~~l~v~~~La~~L~~~e~~~~~~~~lg~~l~f 118 (150)
T COG3086 66 ELGIEEKSLLKSALLVYIFPLVGLFLGAILAQYLFFSELIVIFGAFLGLALGF 118 (150)
T ss_pred EEccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 56777777666677777888888889999999988765543 33333333333
No 321
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=38.21 E-value=34 Score=32.45 Aligned_cols=54 Identities=13% Similarity=0.146 Sum_probs=40.3
Q ss_pred cccccccccchhHHHHHHHHHHHHH-HHHHhhhHHHHhhhC--chhHHHHHHHHHHH
Q 021634 20 TKISNYCKFDSQLLTSFTSSLYVAG-LVASFVASSVTRAFG--RKPSVLMGGAAFLA 73 (310)
Q Consensus 20 ~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~l~dr~G--rr~~~~~~~~~~~~ 73 (310)
.++++.|+.+.+.+..+++...+.. ++|.+++|++..|+- .|....+.++...+
T Consensus 417 KyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l 473 (735)
T KOG3626|consen 417 KYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVL 473 (735)
T ss_pred HHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHH
Confidence 6788899999999999997766655 788899999999874 44444444444333
No 322
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=38.04 E-value=1.9e+02 Score=22.38 Aligned_cols=26 Identities=12% Similarity=-0.248 Sum_probs=20.1
Q ss_pred CCchhHHHHHHHHHhhhhhhhhHHHH
Q 021634 267 LGRLKVCQLSKWIECGGSIGFGRNMW 292 (310)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~g~~~~~~ 292 (310)
-|+.+........+++.++..+..+.
T Consensus 147 ~s~~~G~l~m~~FgLGT~p~ll~~~~ 172 (199)
T PF13386_consen 147 GSPLYGALLMLAFGLGTLPALLLAGL 172 (199)
T ss_pred CChHHHHHHHHHHHHhHHHHHHHHHH
Confidence 46777778888888888877777776
No 323
>PLN02975 complex I subunit
Probab=35.96 E-value=1.2e+02 Score=20.51 Aligned_cols=62 Identities=16% Similarity=0.162 Sum_probs=33.3
Q ss_pred ccccccccccc-cchhHHHHHHHHHHHHHHHHHhhhHHHHh--hhCchhHHHHHHHHHHHHHHHhhhhhh
Q 021634 17 KEDTKISNYCK-FDSQLLTSFTSSLYVAGLVASFVASSVTR--AFGRKPSVLMGGAAFLAGSALGGAAVN 83 (310)
Q Consensus 17 ~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~l~d--r~Grr~~~~~~~~~~~~~~~~~~~~~~ 83 (310)
+.+|.+.+-++ ..+++.....++..++ +..++++. +-++++.+.++.++..++.++.+..+|
T Consensus 14 d~dP~f~rVv~yfr~sDY~~~a~~ta~s-----~~~~~~~~~~~~~~~~~mr~ag~iG~~gGf~~aYq~S 78 (97)
T PLN02975 14 DRNPTFTKVVGNFSALDYLRFATITGVS-----VTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNS 78 (97)
T ss_pred CCCCChHHHHHhCCHHHHHHHHHHHHHH-----HHHHHHHccCccccchHHHHHHHHHHhhhHHhhhccc
Confidence 44555444332 3445554444433333 33334432 345677777887777777777766554
No 324
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=35.35 E-value=1.5e+02 Score=20.44 Aligned_cols=25 Identities=12% Similarity=0.050 Sum_probs=13.9
Q ss_pred HHHHhhcccccccchhhhhhhcccc
Q 021634 91 RLLLGVGVGFANQSVPLYLSEMAPA 115 (310)
Q Consensus 91 r~l~G~~~~~~~~~~~~~~~~~~~~ 115 (310)
|.+.+.|.-+.++...++..|...-
T Consensus 56 ~~~l~tGf~GgfTTFSTf~~e~~~l 80 (108)
T PRK14229 56 YAILATGFCGGLTTFSTLNDELQRL 80 (108)
T ss_pred HHHHHhhHccccccHHHHHHHHHHH
Confidence 3333444444566667777777653
No 325
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=35.02 E-value=4.4e+02 Score=25.76 Aligned_cols=36 Identities=17% Similarity=0.143 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHH
Q 021634 126 QFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPAS 164 (310)
Q Consensus 126 ~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~ 164 (310)
..+..++.++..+++.++.. ..+|..+++++++++-
T Consensus 107 ~~~M~lT~livAL~a~~Li~---GL~~~~ALLLGAILAP 142 (810)
T TIGR00844 107 VPVMTSGWLVIALFVWILVP---GLNFPASLLMGACITA 142 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHc---CCCHHHHHHHHhhhcC
Confidence 33344555555555443321 1458777777666653
No 326
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=34.78 E-value=1.4e+02 Score=21.75 Aligned_cols=24 Identities=17% Similarity=0.195 Sum_probs=17.8
Q ss_pred hhhcccccchhhhhhHHHHHHHHH
Q 021634 109 LSEMAPARYRGAINNGFQFSIGIG 132 (310)
Q Consensus 109 ~~~~~~~~~r~~~~~~~~~~~~~g 132 (310)
+.|++|++.|....+.+.......
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~~ 83 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSAV 83 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHHH
Confidence 589999999988777766554433
No 327
>COG2119 Predicted membrane protein [Function unknown]
Probab=34.52 E-value=1.6e+02 Score=22.61 Aligned_cols=37 Identities=11% Similarity=0.195 Sum_probs=26.7
Q ss_pred HHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHH
Q 021634 40 LYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSA 76 (310)
Q Consensus 40 ~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~ 76 (310)
..+...++...+.++++|+..|.+-..+.+++.+..+
T Consensus 143 ~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fal 179 (190)
T COG2119 143 MILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFAL 179 (190)
T ss_pred HHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHH
Confidence 3455567777788899999988888777766655543
No 328
>CHL00114 psbX photosystem II protein X; Reviewed
Probab=34.47 E-value=34 Score=18.50 Aligned_cols=23 Identities=0% Similarity=-0.239 Sum_probs=12.1
Q ss_pred CchhHHHHHHHHHhhhhhhhhHH
Q 021634 268 GRLKVCQLSKWIECGGSIGFGRN 290 (310)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~g~~~~ 290 (310)
+++.++++.++...+.++...+.
T Consensus 2 TpSLsnF~~SL~~Ga~ivvipi~ 24 (39)
T CHL00114 2 TPSLSAFINSLLLGAIIVVIPIT 24 (39)
T ss_pred ChhHHHHHHHHHHHHHHhHHHhh
Confidence 45556666666555544443433
No 329
>PF06596 PsbX: Photosystem II reaction centre X protein (PsbX); InterPro: IPR009518 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. The low molecular weight transmembrane protein PsbX found in PSII is associated with the oxygen-evolving complex. Its expression is light-regulated. PsbX appears to be involved in the regulation of the amount of PSII [], and may be involved in the binding or turnover of quinone molecules at the Qb (PsbA) site [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0016020 membrane; PDB: 3ARC_x 3A0H_X 3A0B_X 3PRR_X 1S5L_x 4FBY_j 3PRQ_X 3KZI_X 3BZ2_X 3BZ1_X.
Probab=33.65 E-value=73 Score=17.33 Aligned_cols=15 Identities=7% Similarity=-0.190 Sum_probs=7.9
Q ss_pred CchhHHHHHHHHHhh
Q 021634 268 GRLKVCQLSKWIECG 282 (310)
Q Consensus 268 ~~~~~~~~~~~~~~~ 282 (310)
+++...++.++...+
T Consensus 2 TpSL~nfl~Sl~aG~ 16 (39)
T PF06596_consen 2 TPSLSNFLLSLVAGA 16 (39)
T ss_dssp -HHHHHHHHHHHHHH
T ss_pred CHhHHHHHHHHHhhh
Confidence 345555666665555
No 330
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=33.57 E-value=1.1e+02 Score=19.44 Aligned_cols=61 Identities=13% Similarity=0.035 Sum_probs=34.8
Q ss_pred HHHhhhCchhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhcccccccchhhhhhhcccccc
Q 021634 53 SVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARY 117 (310)
Q Consensus 53 ~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~ 117 (310)
+--|+-.|++-+.+.+.+-..+.++..+....+.+ +...-. .+...|-....+++--++++
T Consensus 9 ~~~d~~~R~r~Y~i~M~~Ri~~fvlA~~~~~~~~l---a~~~~~-~av~LPwvAVviAN~~~~~~ 69 (73)
T PF11298_consen 9 LSQDQRRRRRRYLIMMGIRIPCFVLAAVVYRLGWL---AWAIIV-GAVPLPWVAVVIANARPPRR 69 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH---HHHHHH-HhcccchhheeeccCCCCCC
Confidence 34577788888888888877777777666544222 111111 23445555555555444433
No 331
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=32.04 E-value=1.5e+02 Score=21.65 Aligned_cols=23 Identities=22% Similarity=0.450 Sum_probs=17.2
Q ss_pred hhhcccccchhhhhhHHHHHHHH
Q 021634 109 LSEMAPARYRGAINNGFQFSIGI 131 (310)
Q Consensus 109 ~~~~~~~~~r~~~~~~~~~~~~~ 131 (310)
+.|++|+..|..+.+.+......
T Consensus 58 LkDm~Pp~~R~~i~~~~s~t~s~ 80 (145)
T TIGR00986 58 LKDIVPPTTRGWIYHKYSTTTNF 80 (145)
T ss_pred HHhhCCHHHHHHHHHHHHHHHHH
Confidence 68999999998877766655443
No 332
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=30.72 E-value=2.5e+02 Score=25.81 Aligned_cols=71 Identities=11% Similarity=0.046 Sum_probs=31.2
Q ss_pred hhhccccchhHHHHHHHHHHHHHhhhHHHHHHhHHHHHHHcC-CCchhHHHH----HHHHHhhhhhhhhHHHHHHHHHHh
Q 021634 225 KKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRTIG-LGRLKVCQL----SKWIECGGSIGFGRNMWVKWMNRV 299 (310)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~----~~~~~~~~~~g~~~~~~~~l~d~~ 299 (310)
.|.+|.+. ++.++..++....|....... ..++...| .++..-+.+ .....+.+.++...++. +-..+
T Consensus 252 gDVFR~P~-~~~lls~lvG~G~Qll~~~~~----~~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~--~yk~~ 324 (521)
T PF02990_consen 252 GDVFRPPK-HPMLLSALVGTGIQLLFMALV----TLFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYVSAR--LYKSF 324 (521)
T ss_pred HHHhcCcC-CchHHHhHhcchhhhhHHHHH----HHHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHHHHH--HHHHc
Confidence 35565444 344555555555554432222 22223333 333333333 33334445555555555 55555
Q ss_pred ccc
Q 021634 300 RWR 302 (310)
Q Consensus 300 g~r 302 (310)
+.|
T Consensus 325 ~g~ 327 (521)
T PF02990_consen 325 GGK 327 (521)
T ss_pred CCC
Confidence 543
No 333
>PF08566 Pam17: Mitochondrial import protein Pam17; InterPro: IPR013875 The presequence translocase-associated motor (PAM) drives the completion of preprotein translocation into the mitochondrial matrix. The Pam17 subunit is required for formation of a stable complex between cochaperones Pam16 and Pam18 and promotes the association of Pam16-Pam18 with the presequence translocase []. Mitochondria lacking Pam17 are selectively impaired in the import of matrix proteins [].
Probab=30.66 E-value=2.3e+02 Score=21.53 Aligned_cols=10 Identities=0% Similarity=0.195 Sum_probs=6.3
Q ss_pred cchhhhhccc
Q 021634 221 NHPFKKIIQR 230 (310)
Q Consensus 221 ~~~~~~~~~~ 230 (310)
..+|.+.++-
T Consensus 24 ~L~W~~ffkL 33 (173)
T PF08566_consen 24 QLTWNEFFKL 33 (173)
T ss_pred CCCHHHHHHH
Confidence 4567777663
No 334
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=29.93 E-value=2.1e+02 Score=23.27 Aligned_cols=52 Identities=15% Similarity=0.132 Sum_probs=22.7
Q ss_pred hhhhHHHHHHHHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHH
Q 021634 80 AAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALA 135 (310)
Q Consensus 80 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 135 (310)
+++|...++.+-+..|+.... ....-......| +|+....+...++++|..+
T Consensus 30 LS~s~~FyY~sg~~lGv~~s~--li~~~~~~k~lP--rk~~~~~~l~gg~~~~~y~ 81 (249)
T PF10225_consen 30 LSRSVLFYYSSGISLGVLASL--LILLFQLSKLLP--RKSMFYAVLYGGWSFGLYF 81 (249)
T ss_pred hccChhHHHhhhHHHHHHHHH--HHHHHHHHHHcc--CcchhHHHHhhhhHHHHHH
Confidence 345555555555555553221 122223456666 3433333444444444433
No 335
>PF15192 TMEM213: TMEM213 family
Probab=28.97 E-value=1e+02 Score=19.31 Aligned_cols=10 Identities=30% Similarity=0.723 Sum_probs=5.8
Q ss_pred hcccCCchhh
Q 021634 171 LFLPETPNSL 180 (310)
Q Consensus 171 ~~~~es~~~~ 180 (310)
-+.||.|+.+
T Consensus 71 KLtPdepK~l 80 (82)
T PF15192_consen 71 KLTPDEPKDL 80 (82)
T ss_pred ccCCCCcccc
Confidence 4467776543
No 336
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=28.80 E-value=1.3e+02 Score=19.87 Aligned_cols=33 Identities=21% Similarity=0.447 Sum_probs=20.9
Q ss_pred hhHHHHHHHHHHHhhcccccccchhhhhhhccc
Q 021634 82 VNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAP 114 (310)
Q Consensus 82 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~ 114 (310)
+-.+-++++|.+.|-+.+..-........|.-|
T Consensus 29 pit~RL~iGR~ilGs~~S~~Aga~Li~~Pdl~p 61 (89)
T PF04550_consen 29 PITLRLFIGRVILGSAVSVVAGAALIQFPDLPP 61 (89)
T ss_pred CCchhHHhHHHHHhhHHHHHHHHHHhcCCCCCH
Confidence 334567888999888776655554444455444
No 337
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=28.75 E-value=2.8e+02 Score=21.56 Aligned_cols=29 Identities=7% Similarity=-0.129 Sum_probs=19.6
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHHhhhcc
Q 021634 117 YRGAINNGFQFSIGIGALAANFINYGTEQ 145 (310)
Q Consensus 117 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 145 (310)
+.+++..+.-.+..+|.++|..+..++..
T Consensus 138 ~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 138 KLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 34677777777777777777777655543
No 338
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=27.76 E-value=75 Score=21.39 Aligned_cols=24 Identities=17% Similarity=0.260 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHhhhHHHHhhhCch
Q 021634 38 SSLYVAGLVASFVASSVTRAFGRK 61 (310)
Q Consensus 38 ~~~~~~~~~~~~~~g~l~dr~Grr 61 (310)
-.....+.+.+.+.|.+.||..||
T Consensus 82 ~~~~~~~l~va~v~g~l~~~~r~~ 105 (105)
T PF13493_consen 82 WITFAVFLVVALVTGYLADRYRRQ 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhC
Confidence 344556677788999999998876
No 339
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=27.20 E-value=1.6e+02 Score=25.23 Aligned_cols=42 Identities=19% Similarity=0.230 Sum_probs=36.0
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHH
Q 021634 29 DSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAA 70 (310)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 70 (310)
.-++++.....+.++.++.+.+.|.+..++||-+.+..+...
T Consensus 308 Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~~~~v~gavv 349 (390)
T KOG3097|consen 308 GVSRIGFAMACFGVGDAVASSLFGLLGKWIGRPPLLVLGAVV 349 (390)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHH
Confidence 456788899999999999999999999999999987766544
No 340
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=26.59 E-value=3e+02 Score=24.02 Aligned_cols=14 Identities=14% Similarity=0.045 Sum_probs=7.6
Q ss_pred cccchhhhhhhccc
Q 021634 101 ANQSVPLYLSEMAP 114 (310)
Q Consensus 101 ~~~~~~~~~~~~~~ 114 (310)
..+..+.++.|.+=
T Consensus 251 vl~ii~~i~~E~~L 264 (374)
T PF01528_consen 251 VLSIIYLIVIEVVL 264 (374)
T ss_pred HHHHHHHHHHHHHH
Confidence 34455555666653
No 341
>TIGR00930 2a30 K-Cl cotransporter.
Probab=26.54 E-value=6.8e+02 Score=25.25 Aligned_cols=7 Identities=29% Similarity=0.871 Sum_probs=3.2
Q ss_pred hhHHHHH
Q 021634 151 GWRVSLA 157 (310)
Q Consensus 151 ~wr~~~~ 157 (310)
+|....+
T Consensus 518 ~w~~ali 524 (953)
T TIGR00930 518 SWWAALV 524 (953)
T ss_pred HHHHHHH
Confidence 4644433
No 342
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=25.66 E-value=1.4e+02 Score=26.25 Aligned_cols=55 Identities=9% Similarity=-0.071 Sum_probs=39.7
Q ss_pred HHHHHhhcccccccchhhhhhhcccccchhhhhhHHHHHHHHHHHHHHHHHhhhc
Q 021634 90 GRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE 144 (310)
Q Consensus 90 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~ 144 (310)
...+.+...-..+....+..+.+.||.-.|..|++.+.-.++|.---..+...+.
T Consensus 375 ~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~ 429 (510)
T KOG3574|consen 375 SYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLA 429 (510)
T ss_pred HHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhc
Confidence 3555555555566677778889999999999999999888888655544444343
No 343
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=25.41 E-value=3.5e+02 Score=21.61 Aligned_cols=51 Identities=8% Similarity=0.147 Sum_probs=33.4
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHhhhHHHHhhhCchhHHHHHHHHHHHHHH
Q 021634 23 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSA 76 (310)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~ 76 (310)
.+.++++..+.|...+..+.... +....+.+|.+.++....|.+...+|..
T Consensus 123 a~~~~~s~~~ig~~~g~if~i~i---l~ss~i~r~~~~~~p~~LG~~Mi~~Gly 173 (224)
T PF09930_consen 123 APSIGLSGWEIGLVLGLIFFILI---LLSSFIFRRLKKPYPIILGNFMIFLGLY 173 (224)
T ss_pred HHhcCchHHHHHHHHHHHHHHHH---HHHHHHHHHhcCCCchHHHHHHHHHHHH
Confidence 34567777777777766555554 6666677788866666776666666543
No 344
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=25.08 E-value=4.5e+02 Score=22.69 Aligned_cols=95 Identities=18% Similarity=0.114 Sum_probs=53.0
Q ss_pred HHHhhhHHHHhhhCchhHHHHHHHHHHH---HHHHhhhhhhHHHHHHHHHHHhhcccccccchhhhhhhcccccch-hhh
Q 021634 46 VASFVASSVTRAFGRKPSVLMGGAAFLA---GSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYR-GAI 121 (310)
Q Consensus 46 ~~~~~~g~l~dr~Grr~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r-~~~ 121 (310)
+-.++.+++.+..|--+.+..++++..= -.+...+++|......+..+.|.-.|....-....--...++|+| -.+
T Consensus 61 ~l~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TIvFtIPVaLgii~k~D~~y~a 140 (354)
T PF04346_consen 61 FLSPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGATIVFTIPVALGIIEKEDHKYLA 140 (354)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhcccEEeehhhhhhhcChhhhHHHH
Confidence 3445666788888888888776666432 234455677777777777777765554433332222333334433 334
Q ss_pred hhHHH--HHHHHHHHHHHHHH
Q 021634 122 NNGFQ--FSIGIGALAANFIN 140 (310)
Q Consensus 122 ~~~~~--~~~~~g~~~~~~~~ 140 (310)
.|... ...++|.+++..+.
T Consensus 141 ~Gil~GiitIPiG~~vggl~~ 161 (354)
T PF04346_consen 141 KGILAGIITIPIGCFVGGLIA 161 (354)
T ss_pred HHHHHHHhhhCHHHHHHHHHH
Confidence 44432 33455666665553
No 345
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=25.02 E-value=3.2e+02 Score=23.65 Aligned_cols=17 Identities=12% Similarity=0.192 Sum_probs=8.9
Q ss_pred HHHHHHhhhHHHHhhhC
Q 021634 43 AGLVASFVASSVTRAFG 59 (310)
Q Consensus 43 ~~~~~~~~~g~l~dr~G 59 (310)
.-.+.....|++..|+|
T Consensus 7 ~~i~~ii~~G~~~~~~~ 23 (385)
T PF03547_consen 7 LPIFLIILLGYLLGRFG 23 (385)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 33444555566666553
No 346
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=24.63 E-value=2.3e+02 Score=19.26 Aligned_cols=34 Identities=3% Similarity=-0.217 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhHHHHhh-hCchhHHHHHHHHHHH
Q 021634 40 LYVAGLVASFVASSVTRA-FGRKPSVLMGGAAFLA 73 (310)
Q Consensus 40 ~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~~ 73 (310)
..+...+.+.+.|...|+ ||-++.+.+..++.++
T Consensus 51 ~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv 85 (100)
T TIGR02230 51 SVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGV 85 (100)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 344445666666777775 6766655544444333
No 347
>PF01405 PsbT: Photosystem II reaction centre T protein; InterPro: IPR001743 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbT found in PSII, which is thought to be associated with the D1 (PsbA) - D2 (PsbD) heterodimer. PsbT may be involved in the formation and/or stabilisation of dimeric PSII complexes, because in the absence of this protein dimeric PSII complexes were found to be less abundant. Furthermore, although PsbT does not confer photo-protection, it is required for the efficient recovery of photo-damaged PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3BZ1_T 1S5L_t 2AXT_t 3KZI_T 3PRQ_T 3BZ2_T 3PRR_T 4FBY_g 3A0H_t 3A0B_T ....
Probab=24.06 E-value=1.1e+02 Score=15.34 Aligned_cols=9 Identities=44% Similarity=0.921 Sum_probs=2.8
Q ss_pred hhcccCCch
Q 021634 170 ALFLPETPN 178 (310)
Q Consensus 170 ~~~~~es~~ 178 (310)
..+++|.|+
T Consensus 20 AI~FRePPr 28 (29)
T PF01405_consen 20 AIFFREPPR 28 (29)
T ss_dssp HHHSS----
T ss_pred hhhccCCCC
Confidence 345677664
No 348
>PLN02878 homogentisate phytyltransferase
Probab=23.31 E-value=3.8e+02 Score=22.32 Aligned_cols=21 Identities=14% Similarity=0.074 Sum_probs=15.4
Q ss_pred hhCchhHHHHHHHHHHHHHHH
Q 021634 57 AFGRKPSVLMGGAAFLAGSAL 77 (310)
Q Consensus 57 r~Grr~~~~~~~~~~~~~~~~ 77 (310)
|+|+|+..-++..+..++...
T Consensus 195 ~lG~~~~~~i~~~ll~~aY~~ 215 (280)
T PLN02878 195 RLGQKRVFWLCVNLLEMAYAA 215 (280)
T ss_pred hhChHHHHHHHHHHHHHHHHH
Confidence 688888888877776666553
No 349
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=23.23 E-value=1.9e+02 Score=26.54 Aligned_cols=45 Identities=13% Similarity=0.264 Sum_probs=31.1
Q ss_pred cccccchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHH
Q 021634 112 MAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSL 156 (310)
Q Consensus 112 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~ 156 (310)
...+++||......-....+++.+++.+++.+....+...|+...
T Consensus 289 ~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~~~g~~W~~~~ 333 (521)
T PF02990_consen 289 FLSPNNRGSLLTAAIILYALTSFIAGYVSARLYKSFGGKKWKKNS 333 (521)
T ss_pred hccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHcCCCceeehh
Confidence 345677888887777777777777777777666555555677543
No 350
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=22.81 E-value=88 Score=18.75 Aligned_cols=20 Identities=25% Similarity=0.320 Sum_probs=16.4
Q ss_pred hhHHHHHhhHHHHHHHHHHh
Q 021634 151 GWRVSLALAAVPASILTLGA 170 (310)
Q Consensus 151 ~wr~~~~~~~~~~~~~~~~~ 170 (310)
+||...++.++++++.+.++
T Consensus 4 g~r~~~~~ggfVg~iG~a~Y 23 (58)
T PF15061_consen 4 GWRYALFVGGFVGLIGAALY 23 (58)
T ss_pred cccchhhHHHHHHHHHHHHh
Confidence 69999999998888876655
No 351
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=22.65 E-value=1.8e+02 Score=17.32 Aligned_cols=47 Identities=13% Similarity=0.135 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHHHHHHHhhcccCCc
Q 021634 128 SIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETP 177 (310)
Q Consensus 128 ~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~ 177 (310)
+.-+|.+++...+..... .++++....+..+.+++...+...+|+++
T Consensus 10 s~il~~vvgyI~ssL~~~---~~n~~~~~Ii~vi~~i~~~~~~~~i~~~~ 56 (57)
T PF11151_consen 10 SFILGEVVGYIGSSLTGV---TYNFTTAAIIAVIFGIIVANIIAVIPKKS 56 (57)
T ss_pred HHHHHHHHHHHHHHHhCC---CCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 344555555444332222 34577777777777777666666666543
No 352
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=22.43 E-value=6e+02 Score=23.20 Aligned_cols=68 Identities=16% Similarity=0.289 Sum_probs=36.7
Q ss_pred Hhhcccccccchhhhhhhcccc-cchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHhhHHHHH
Q 021634 94 LGVGVGFANQSVPLYLSEMAPA-RYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPAS 164 (310)
Q Consensus 94 ~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~ 164 (310)
.|+........--..+.+.+|. +++...+|-++...++-.++...++..+. ...||+....+.-++.+
T Consensus 292 Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~ii---r~~GW~~~AlitPiv~l 360 (491)
T PF03219_consen 292 YGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNII---RRFGWRTAALITPIVIL 360 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhhHHHHHHHhHHHHH
Confidence 3444444444444556666664 44566666666665555555445543333 34689887766433333
No 353
>PRK10621 hypothetical protein; Provisional
Probab=22.17 E-value=4.4e+02 Score=21.51 Aligned_cols=20 Identities=10% Similarity=0.112 Sum_probs=12.4
Q ss_pred HHHHHHHhhhHHHHhhhCch
Q 021634 42 VAGLVASFVASSVTRAFGRK 61 (310)
Q Consensus 42 ~~~~~~~~~~g~l~dr~Grr 61 (310)
++..++.+++.++.++...+
T Consensus 85 ~~~l~Ga~~G~~l~~~l~~~ 104 (266)
T PRK10621 85 AMTFVGSMSGALLVQYVQAD 104 (266)
T ss_pred HHHHHHHHHHHHHHHhCCHH
Confidence 44556666666666666654
No 354
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=21.31 E-value=7.4e+02 Score=23.90 Aligned_cols=52 Identities=19% Similarity=0.214 Sum_probs=31.8
Q ss_pred HhhhHHHHhh----hCchhHHHHHHHHHHHHHHHhhhhhhH-HHHHHHHHHHhhccc
Q 021634 48 SFVASSVTRA----FGRKPSVLMGGAAFLAGSALGGAAVNV-YMLIFGRLLLGVGVG 99 (310)
Q Consensus 48 ~~~~g~l~dr----~Grr~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~r~l~G~~~~ 99 (310)
+.+.+-++|. -||.+-++++..++.++++...+...+ +.+..+-.+.+++.+
T Consensus 40 G~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~ 96 (701)
T TIGR01667 40 GIIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFI 96 (701)
T ss_pred hhHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 3444556663 356788888888888888877665443 444444555555433
No 355
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=21.09 E-value=3.9e+02 Score=20.52 Aligned_cols=30 Identities=13% Similarity=0.117 Sum_probs=15.2
Q ss_pred HHHHhhhHHHHhhhCchhHHHHHHHHHHHH
Q 021634 45 LVASFVASSVTRAFGRKPSVLMGGAAFLAG 74 (310)
Q Consensus 45 ~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~ 74 (310)
.++.++.-.+..|.++|-.+.+-.++.++.
T Consensus 42 li~g~vyml~~~KV~K~G~~~i~~~i~gl~ 71 (186)
T PF09605_consen 42 LICGIVYMLMVAKVPKRGAFLIMGIIMGLI 71 (186)
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHHHHHHH
Confidence 344444445566666665555544444433
No 356
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=20.13 E-value=51 Score=23.58 Aligned_cols=12 Identities=25% Similarity=0.055 Sum_probs=4.9
Q ss_pred HHHHHhhHHHHH
Q 021634 153 RVSLALAAVPAS 164 (310)
Q Consensus 153 r~~~~~~~~~~~ 164 (310)
||++++..++.+
T Consensus 1 RW~l~~iii~~i 12 (130)
T PF12273_consen 1 RWVLFAIIIVAI 12 (130)
T ss_pred CeeeHHHHHHHH
Confidence 344444333333
Done!