BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021641
(309 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q43385|DOF37_ARATH Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7
PE=1 SV=2
Length = 296
Score = 214 bits (544), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 153/355 (43%), Positives = 184/355 (51%), Gaps = 105/355 (29%)
Query: 1 MDAAKWPQNFPEVGGVKAMEEVVSNTCNSSSSSRPP------------------------ 36
MDA KW Q F E+ VK ME+++S+T N++ +P
Sbjct: 1 MDATKWTQGFQEMINVKPMEQMISSTNNNTPQQQPTFIATNTRPNATASNGGSGGNTNNT 60
Query: 37 --MLERKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVG 94
M RKARPQE++NCPRCNSTNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRNVPVG
Sbjct: 61 ATMETRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVG 120
Query: 95 GGSRKNKRSISSSAAAASSSNNNNNNNNNYNKLIIPDLNPPSLSHFSSHENPKILKGGQD 154
G SRKNKR SS AS SN +PDLNPP L FSS + P K +D
Sbjct: 121 GSSRKNKR---SSTPLASPSNPK-----------LPDLNPPIL--FSS-QIPN--KSNKD 161
Query: 155 LN-LGFQVMHNNANDMSQYADHPAVASKAETNTTSNDNINNNMSPVSALDLLRTGIASRA 213
LN L F VM ++ + AL+LLR+ S
Sbjct: 162 LNLLSFPVMQDHHHH--------------------------------ALELLRSNGVSSR 189
Query: 214 GLDHFIPTPMPDSNTLFSS--GFP-LQDIKPA-ATLSFSIDQANRFG---------IQDN 260
G++ F+P M DSN++ S GFP + D K + LSFSID G QDN
Sbjct: 190 GMNTFLPGQMMDSNSVLYSSLGFPTMPDYKQSNNNLSFSIDHHQGIGHNTINSNQRAQDN 249
Query: 261 ---IGNGSRLFFPFGELKQLSSASTTEVDHHSNKGTSTSTGYWNGMF---GGGSW 309
+ SR+ FPF ++K+LS STT+ H N YWNGMF GG SW
Sbjct: 250 NDDMNGASRVLFPFSDMKELS--STTQEKSHGNN------TYWNGMFSNTGGSSW 296
>sp|Q9ZPY0|DOF25_ARATH Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana GN=DOF2.5
PE=2 SV=3
Length = 369
Score = 213 bits (542), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 169/393 (43%), Positives = 215/393 (54%), Gaps = 108/393 (27%)
Query: 1 MDAAKWPQNFPEVGGVKAMEEVV-----SNTCNSSSSSRPPML----------------- 38
MDA KW Q F E+ VK ME+++ ++ N++S++RP +
Sbjct: 1 MDATKWTQGFQEMMNVKPMEQIMIPNNNTHQPNTTSNARPNTILTSNGVSTAGATVSGVS 60
Query: 39 ----------ERKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSL 88
ERKARPQE+LNCPRCNSTNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSL
Sbjct: 61 NNNNNTAVVAERKARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSL 120
Query: 89 RNVPVGGGSRKNKRSISSSAAAASSSNNNNNNNNNYNKLIIPDLNPPSLSHFSSHENPKI 148
RNVPVGG SRKNKRS SSS++ + ++ +PDLNPP L FS+ + K
Sbjct: 121 RNVPVGGSSRKNKRSSSSSSSNILQTIPSS----------LPDLNPPIL--FSNQIHNKS 168
Query: 149 LKGGQDLN-LGFQVM---HNNANDMSQYADHPAVASKAETNTTSNDNINNNMSP------ 198
QDLN L F VM H++ MSQ+ P + N NI + P
Sbjct: 169 KGSSQDLNLLSFPVMQDQHHHHVHMSQFLQMPKME--------GNGNITHQQQPSSSSSV 220
Query: 199 -------VSALDLLRTG--IASRAGLD-HFIPT-PMPDSNTLF--SSGFP-LQDIKPAAT 244
VSAL+LLRTG ++SR+G++ F+P+ M DSNT+ SSGFP + D KP +
Sbjct: 221 YGSSSSPVSALELLRTGVNVSSRSGINSSFMPSGSMMDSNTVLYTSSGFPTMVDYKP-SN 279
Query: 245 LSFSIDQANRFGIQDNIGNGS-----------RLFFPFG-ELKQLSSASTTEVDHHSNKG 292
LSFS D G+ N N S R+ FPFG ++K+LSS+ T EVDH N+
Sbjct: 280 LSFSTDHQ---GLGHNSNNRSEALHSDHHQQGRVLFPFGDQMKELSSSITQEVDHDDNQQ 336
Query: 293 TST------------STGYWNGMF----GGGSW 309
+ + GYW+GMF GG SW
Sbjct: 337 QKSHGNNNNNNNSSPNNGYWSGMFSTTGGGSSW 369
>sp|Q8LAP8|DOF46_ARATH Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6
PE=2 SV=2
Length = 342
Score = 184 bits (468), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 143/374 (38%), Positives = 188/374 (50%), Gaps = 98/374 (26%)
Query: 1 MDAAKWPQNFPEVGGVKAMEEVVSNTCNSSSSSRPPML-------ERKARPQ--EQLNCP 51
MD A+WPQ VK +EE+V+NTC ERKARP+ + +NCP
Sbjct: 1 MDTAQWPQEIV----VKPLEEIVTNTCPKPQPQPLQPQQPPSVGGERKARPEKDQAVNCP 56
Query: 52 RCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSISSSAAAA 111
RCNSTNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGGGSRKNKRS SSS+ +
Sbjct: 57 RCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKRSHSSSSDIS 116
Query: 112 SSSNNNNNNNNNYNKLIIPDLNPPSLSHFSSH--------------ENPKILKGG-QDLN 156
++ +++ P + H S H +NPK L+ QDLN
Sbjct: 117 NNHSDST--------------QPATKKHLSDHHHHLMSMSQQGLTGQNPKFLETTQQDLN 162
Query: 157 LGFQ---VMHNNANDM----------SQYADHPAVASKAETNTTSNDNINNNMSPVSALD 203
LGF ++ N D+ S ++P + S T S+LD
Sbjct: 163 LGFSPHGMIRTNFTDLIHNIGNNTNKSNNNNNPLIVSSCSAMAT------------SSLD 210
Query: 204 LLR-TGIASRAGLDHFIPTPMPDSNTLFSSGFPLQD-IKPAAT----LSFSIDQANRFGI 257
L+R + F+ P+ + + S GF +QD KP T L FS+D + G
Sbjct: 211 LIRNNSNNGNSSNSSFMGFPVHNQDPA-SGGFSMQDHYKPCNTNTTLLGFSLDHHHNNGF 269
Query: 258 Q-------------DNIGNGSRLFFPFGELKQ-LSSASTT---EVDHHSNKGT-----ST 295
D++ NG R FPF +LK +SS+S T +++ H +G+ +T
Sbjct: 270 HGGFQGGEEGGEGGDDV-NG-RHLFPFEDLKLPVSSSSATINVDINEHQKRGSGSDAAAT 327
Query: 296 STGYWNGMFGGGSW 309
S GYW GM GGSW
Sbjct: 328 SGGYWTGMLSGGSW 341
>sp|Q84JQ8|DOF18_ARATH Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8
PE=2 SV=1
Length = 352
Score = 152 bits (383), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 135/355 (38%), Positives = 187/355 (52%), Gaps = 68/355 (19%)
Query: 1 MDAAKWPQNFPEVGGVKAMEEVVSNTCNSSSSSRP---PMLERKARPQ--EQLNCPRCNS 55
MD AKWPQ F VK M E+V+NTC S+ P +ERKARP+ + LNCPRCNS
Sbjct: 1 MDTAKWPQEF----VVKPMNEIVTNTCLKQQSNPPSPATPVERKARPEKDQALNCPRCNS 56
Query: 56 TNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSISSSAAAASSSN 115
NTKFCYYNNYSLTQPRYFCK CRRYWT GGSLRN+PVGGG RKNKRS S+S++++ SS+
Sbjct: 57 LNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGGVRKNKRSSSNSSSSSPSSS 116
Query: 116 NNNNN----NNNYNKLIIPDLNPPSLSHFSSHENPKILKGG-------QDLNL----GFQ 160
+++ NNN +P LNP ++ G +DLNL GF
Sbjct: 117 SSSKKPLFANNNTPTPPLPHLNPKIGEAAATKVQDLTFSQGFGNAHEVKDLNLAFSQGFG 176
Query: 161 VMHNNANDMSQYADHPAVASKAETNTTSNDNINNNMSPVSALDLLRTGIASRAGLDHFIP 220
+ HN+ + + ++ V S + N N +S S+L+LL GI+S + + P
Sbjct: 177 IGHNHHSSIPEFLQ--VVPSSSMKN-------NPLVSTSSSLELL--GISSSSASSNSRP 225
Query: 221 TPMP-----DSNTLFSSGFPL------QDIKPAATLSFSIDQANRFGIQDNIG--NGSRL 267
M DS+ +SGF L + ++PA L FS+D + ++ N R
Sbjct: 226 AFMSYPNVHDSSVYTASGFGLSYPQFQEFMRPA--LGFSLDGGDPLRQEEGSSGTNNGRP 283
Query: 268 FFPFGELKQLSSAST-----------------TEVDHHSNKGTS-TSTGYWNGMF 304
PF L +L +S+ ++ +H +G + S G+W+GM
Sbjct: 284 LLPFESLLKLPVSSSSTNSGGNGNLKENNDEHSDHEHEKEEGEADQSVGFWSGML 338
>sp|Q9M161|DOF41_ARATH Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana GN=DOF4.1
PE=2 SV=2
Length = 294
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 124/278 (44%), Gaps = 54/278 (19%)
Query: 37 MLERKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGG 96
M RPQE NCPRCNS+NTKFCYYNNYSL QPRY CK+CRRYWTEGGSLRNVPVGGG
Sbjct: 57 MTTMSTRPQEPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGG 116
Query: 97 SRKNKRSISSSAAAASSSNNNNNNNNNYNKLIIPDLNPPSL--SHFSSHENPKILKGGQD 154
SRKNK+ +++ +SS+ N +PDLNPP + S SS K + D
Sbjct: 117 SRKNKKLPFPNSSTSSSTKN------------LPDLNPPFVFTSSASSSNPSKTHQNNND 164
Query: 155 LNLGFQVMHNNANDMSQYADHPAVASKAETNTTSNDNINNNMSPVSALDLLRTGIASRAG 214
L+L F + Y N +P+ + R
Sbjct: 165 LSLSFSSPMQDKRAQGHYGHFSEQVVTGGQNCLF-------QAPMGMIQF-------RQE 210
Query: 215 LDHFIPTPMPDSNTLFSSGFPLQDIKPAATLSFSIDQ-ANRFGIQDNI---GNGSRLFFP 270
DH P L FS+D+ G DN GS++ +P
Sbjct: 211 YDH---------------------EHPKKNLGFSLDRNEEEIGNHDNFVVNEEGSKMMYP 249
Query: 271 FGELKQLSSASTTEVDHHSNKGT-STSTGYWNGMFGGG 307
+G+ + D + K +S W+G+ GG
Sbjct: 250 YGDHEDRQQHHHVRHDDGNKKREGGSSNELWSGIILGG 287
>sp|Q84TE9|DOF53_ARATH Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3
PE=2 SV=1
Length = 257
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 54/71 (76%), Positives = 62/71 (87%)
Query: 38 LERKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGS 97
+ R P+ L CPRC+STNTKFCYYNNYSLTQPRYFCK+CRRYWT+GG+LRN+PVGGG
Sbjct: 45 VTRPQPPELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGC 104
Query: 98 RKNKRSISSSA 108
RKNKRS SS+A
Sbjct: 105 RKNKRSTSSAA 115
>sp|O24463|PBF_MAIZE Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=1 SV=1
Length = 328
Score = 124 bits (312), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 79/114 (69%), Gaps = 16/114 (14%)
Query: 39 ERKARPQ--EQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGG 96
ERK RPQ E L CPRC+S NTKFCYYNNYS++QPRYFCK CRRYWT GG+LRNVP+GGG
Sbjct: 49 ERKPRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGG 108
Query: 97 SRKNKRS------------ISSSAAAASSSNNNNNNNNNYNK--LIIPDLNPPS 136
RKNK + S++ A S S N +++N + NK +++P++ P+
Sbjct: 109 CRKNKHASRFVLGSHTSSSSSATYAPLSPSTNASSSNMSINKHMMMVPNMTMPT 162
>sp|Q9M2U1|DOF36_ARATH Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana GN=DOF3.6
PE=1 SV=2
Length = 323
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 67/88 (76%), Gaps = 6/88 (6%)
Query: 30 SSSSRPPMLERKAR------PQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWT 83
SS +R + +AR P+ LNCPRC+STNTKFCY+NNYSLTQPR+FCKTCRRYWT
Sbjct: 52 SSQARVNSMVERARIAKVPLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWT 111
Query: 84 EGGSLRNVPVGGGSRKNKRSISSSAAAA 111
GGSLRNVPVGGG R+NKRS S S +
Sbjct: 112 RGGSLRNVPVGGGFRRNKRSKSRSKSTV 139
>sp|Q9M1E6|DOF32_ARATH Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana GN=DOF3.2
PE=2 SV=1
Length = 245
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 63/76 (82%)
Query: 34 RPPMLERKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPV 93
+P R A P++ L CPRC+STNTKFCYYNNYSL+QPRYFCK+CRRYWT+GG LRN+P+
Sbjct: 26 KPLSATRPAPPEQSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPI 85
Query: 94 GGGSRKNKRSISSSAA 109
GG RK+KRS S++ +
Sbjct: 86 GGAYRKHKRSSSATKS 101
>sp|Q9LSL6|DOF57_ARATH Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7
PE=2 SV=1
Length = 316
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 68/96 (70%), Gaps = 4/96 (4%)
Query: 9 NFPEVGGVKAMEEVVSNTCNSSSSSRPPMLERKARPQEQLNCPRCNSTNTKFCYYNNYSL 68
N P V + +S T S + +PP A+ Q+ L CPRCNS NTKFCYYNNYSL
Sbjct: 6 NLPSPKPVPKPDHRISGT---SQTKKPPS-SSVAQDQQNLKCPRCNSPNTKFCYYNNYSL 61
Query: 69 TQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSI 104
+QPR+FCK+CRRYWT GG+LRNVP+GGG RK K+SI
Sbjct: 62 SQPRHFCKSCRRYWTRGGALRNVPIGGGCRKTKKSI 97
>sp|O80928|DOF24_ARATH Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4
PE=2 SV=1
Length = 330
Score = 117 bits (294), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 55/62 (88%)
Query: 42 ARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNK 101
A P+ L CPRC STNTKFCY+NNYSLTQPR+FCKTCRRYWT GG+LRNVPVGGG R+N+
Sbjct: 83 ALPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNR 142
Query: 102 RS 103
R+
Sbjct: 143 RT 144
>sp|Q8LE43|DOF21_ARATH Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana GN=DOF2.1
PE=2 SV=2
Length = 288
Score = 117 bits (294), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 79/126 (62%), Gaps = 10/126 (7%)
Query: 38 LERKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGS 97
+ R E NCPRC S NTKFCYYNNYSL+QPRYFCK+CRRYWT+GG+LRNVPVGGG
Sbjct: 38 VSRGELGGEAQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGC 97
Query: 98 RKNKRSISSSAAAASSSNNNNNNNNNYNKLIIPDLNPPSLSHFSSHENPKILKGGQDLNL 157
R+NKRS SS+ + +++ + N + + +I + P S + S DLNL
Sbjct: 98 RRNKRSSSSAFSKNNNNKSINFHTDPLQNPLITGMPPSSFGYDHS----------IDLNL 147
Query: 158 GFQVMH 163
F +
Sbjct: 148 AFATLQ 153
>sp|Q9LZ56|DOF51_ARATH Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana GN=DOF5.1
PE=2 SV=1
Length = 399
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 6/75 (8%)
Query: 34 RPPMLERKAR------PQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGS 87
RP + +AR P+ L CPRC+STNTKFCY+NNYSLTQPR+FCK CRRYWT GG+
Sbjct: 75 RPGSMAERARLANIPLPETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGA 134
Query: 88 LRNVPVGGGSRKNKR 102
LR+VPVGGG R+NKR
Sbjct: 135 LRSVPVGGGCRRNKR 149
>sp|O82155|DOF17_ARATH Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana GN=DOF1.7
PE=2 SV=1
Length = 194
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 58/63 (92%), Gaps = 1/63 (1%)
Query: 45 QEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRK-NKRS 103
QEQL CPRC+S NTKFCYYNNY+L+QPR+FCK CRRYWT+GG+LRN+PVGGG+RK NKRS
Sbjct: 30 QEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSNKRS 89
Query: 104 ISS 106
SS
Sbjct: 90 GSS 92
>sp|Q9FGD6|DOF58_ARATH Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana GN=DOF5.8
PE=2 SV=1
Length = 225
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
Query: 45 QEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRK-NKRS 103
QEQL+CPRC STNTKFCYYNNY+ +QPR+FCK+CRRYWT GG+LR++PVGG SRK +KRS
Sbjct: 29 QEQLSCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSRKSSKRS 88
Query: 104 ISSSAAAASSSNNNNNNNNNYNKLIIPD 131
+ S+AA +S + N ++ P
Sbjct: 89 RTYSSAATTSVVGSRNFPLQATPVLFPQ 116
>sp|Q8LDR0|DOF54_ARATH Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4
PE=2 SV=2
Length = 307
Score = 114 bits (285), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 62/81 (76%)
Query: 45 QEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSI 104
+ L CPRCNS NTKFCYYNNY+L+QPR+FCK CRRYWT+GG LRNVPVGGG RK KRS
Sbjct: 48 HQSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKAKRSK 107
Query: 105 SSSAAAASSSNNNNNNNNNYN 125
+ ++SS++ ++++
Sbjct: 108 TKQVPSSSSADKPTTTQDDHH 128
>sp|Q9SVC5|DOF35_ARATH Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5
PE=3 SV=1
Length = 247
Score = 114 bits (285), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 58/72 (80%)
Query: 50 CPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSISSSAA 109
CPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWT+GGSLRNVPVGGG RK++R SSS
Sbjct: 27 CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRPKSSSGN 86
Query: 110 AASSSNNNNNNN 121
+S N+ N
Sbjct: 87 NTKTSLTANSGN 98
>sp|Q9ZV33|DOF22_ARATH Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana GN=DOF2.2
PE=2 SV=2
Length = 340
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 59/82 (71%)
Query: 18 AMEEVVSNTCNSSSSSRPPMLERKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKT 77
A V ++ N ++ R + + P+ L CPRC+S NTKFCY+NNY+LTQPR+FCK
Sbjct: 64 AATTVDPSSLNGQAAERARLAKNSQPPEGALKCPRCDSANTKFCYFNNYNLTQPRHFCKA 123
Query: 78 CRRYWTEGGSLRNVPVGGGSRK 99
CRRYWT GG+LRNVPVGGG R+
Sbjct: 124 CRRYWTRGGALRNVPVGGGCRR 145
>sp|Q39088|DOF34_ARATH Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana GN=DOF3.4
PE=1 SV=2
Length = 253
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 55/60 (91%), Gaps = 1/60 (1%)
Query: 45 QEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKN-KRS 103
QEQL CPRC+S+NTKFCYYNNY+ +QPR+FCK CRRYWT GG+LR+VPVGGG+RK+ KRS
Sbjct: 27 QEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTRKSAKRS 86
>sp|P68349|DOF12_ARATH Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2
PE=2 SV=1
Length = 260
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 45/54 (83%), Positives = 49/54 (90%)
Query: 50 CPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRS 103
CPRC S+NTKFCYYNNYSL+QPRYFCK CRRYWT+GGSLRN+PVGGG RK RS
Sbjct: 40 CPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGGCRKRSRS 93
>sp|Q8L9V6|DOF11_ARATH Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1
PE=1 SV=2
Length = 331
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 51/55 (92%)
Query: 48 LNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKR 102
L CPRC+S+NTKFCYYNNY+LTQPR+FCK CRRYWT+GG+LRNVPVGGG R+N +
Sbjct: 77 LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNK 131
>sp|Q9FZA4|DOF14_ARATH Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana GN=DOF1.4
PE=2 SV=1
Length = 311
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 50/55 (90%)
Query: 48 LNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKR 102
L CPRC+S+NTKFCYYNNYSL+QPR+FCK C+RYWT GG+LRNVPVGG RKNKR
Sbjct: 27 LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGSYRKNKR 81
>sp|Q9FM03|DOF56_ARATH Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6
PE=2 SV=2
Length = 372
Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 47/65 (72%), Positives = 53/65 (81%), Gaps = 7/65 (10%)
Query: 34 RPPMLERKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPV 93
RPP PQ+ CPRC ST+TKFCYYNNYSL+QPRYFCKTCRRYWT+GG+LRN+PV
Sbjct: 66 RPP----HDHPQK---CPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPV 118
Query: 94 GGGSR 98
GGG R
Sbjct: 119 GGGCR 123
>sp|Q94AR6|DOF31_ARATH Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1
PE=2 SV=2
Length = 204
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 51/53 (96%)
Query: 48 LNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKN 100
L CPRC+S NTKFCYYNNY+L+QPR+FCK+CRRYWT+GG+LRNVPVGGGSRKN
Sbjct: 29 LKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKN 81
>sp|Q9LQX4|DOF13_ARATH Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana GN=DOF1.3
PE=2 SV=1
Length = 366
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 63/86 (73%)
Query: 43 RPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKR 102
+P + L CPRCNS +TKFCYYNNY++ QPR+FC+ C+RYWT GGS+R VPVG G RKNK
Sbjct: 100 KPDKILPCPRCNSADTKFCYYNNYNVNQPRHFCRKCQRYWTAGGSMRIVPVGSGRRKNKG 159
Query: 103 SISSSAAAASSSNNNNNNNNNYNKLI 128
+SS +S + +N N++ K++
Sbjct: 160 WVSSDQYLHITSEDTDNYNSSSTKIL 185
>sp|Q9SEZ3|CDF5_ARATH Cyclic dof factor 5 OS=Arabidopsis thaliana GN=CDF5 PE=2 SV=1
Length = 399
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 59/79 (74%)
Query: 43 RPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKR 102
+P + + CPRC S NTKFCYYNNY++ QPRYFC+ C+RYWT GGS+RNVPVG G RKNK
Sbjct: 127 KPDKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKNKG 186
Query: 103 SISSSAAAASSSNNNNNNN 121
SS+ +S + +NNN
Sbjct: 187 WPSSNHYLQVTSEDCDNNN 205
>sp|Q8W1E3|CDF1_ARATH Cyclic dof factor 1 OS=Arabidopsis thaliana GN=CDF1 PE=1 SV=2
Length = 298
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 81/140 (57%), Gaps = 20/140 (14%)
Query: 10 FPEVGGVKAMEEVV-SNTCNSSSSSRPPMLERKARPQEQLNCPRCNSTNTKFCYYNNYSL 68
FP V V EE N + S + L++ P + L CPRCNS TKFCYYNNY++
Sbjct: 18 FPTVLEVADEEEEKNQNKTLTDQSEKDKTLKK---PTKILPCPRCNSMETKFCYYNNYNV 74
Query: 69 TQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSISSSAAAASSSNNNNNNNNNYNKLI 128
QPR+FCK C+RYWT GG++R+VP+G G RKNK NN+ ++Y+ +
Sbjct: 75 NQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNK---------------NNSPTSHYHHVT 119
Query: 129 IPDLNPPSLSHFSSHENPKI 148
I + N P LS FS ++ K+
Sbjct: 120 ISETNGPVLS-FSLGDDQKV 138
>sp|Q8LFV3|CDF3_ARATH Cyclic dof factor 3 OS=Arabidopsis thaliana GN=CDF3 PE=1 SV=2
Length = 448
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 50/63 (79%)
Query: 43 RPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKR 102
+P + L CPRC S TKFCYYNNY++ QPR+FCK C+RYWT GG++RNVPVG G RKNK
Sbjct: 105 KPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKS 164
Query: 103 SIS 105
S S
Sbjct: 165 SSS 167
>sp|Q93ZL5|CDF2_ARATH Cyclic dof factor 2 OS=Arabidopsis thaliana GN=CDF2 PE=1 SV=2
Length = 457
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 56/76 (73%), Gaps = 7/76 (9%)
Query: 43 RPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNK- 101
+P + L CPRCNS TKFCYYNNY++ QPR+FCK C+RYWT GG++RNVPVG G RKNK
Sbjct: 133 KPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNKS 192
Query: 102 ------RSISSSAAAA 111
R +S ++A A
Sbjct: 193 PASHYNRHVSITSAEA 208
>sp|Q84K52|DOF47_ARATH Dof zinc finger protein DOF4.7 OS=Arabidopsis thaliana GN=DOF4.7
PE=2 SV=1
Length = 246
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 57/76 (75%), Gaps = 5/76 (6%)
Query: 31 SSSRPPMLERKARP----QEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGG 86
++++PP P Q L CPRC+S NTKFCYYNNYSL+QPR++CK CRRYWT GG
Sbjct: 20 TTAKPPRQINNKEPSPATQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGG 79
Query: 87 SLRNVPVGGGSR-KNK 101
+LRNVP+GG +R KNK
Sbjct: 80 ALRNVPIGGSTRNKNK 95
>sp|Q9SUA9|DOF44_ARATH Dof zinc finger protein DOF4.4 OS=Arabidopsis thaliana GN=DOF4.4
PE=3 SV=1
Length = 210
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 48/60 (80%)
Query: 43 RPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKR 102
RP CPRC+S NTKFC+YNNYS +QPRYFCK CRRYWT GG+LRN+PVGG RK KR
Sbjct: 19 RPPPSRVCPRCDSDNTKFCFYNNYSESQPRYFCKNCRRYWTHGGALRNIPVGGSCRKPKR 78
>sp|Q9SX97|DOF16_ARATH Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana GN=DOF1.6
PE=2 SV=1
Length = 209
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 48/52 (92%)
Query: 46 EQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGS 97
E L CPRCNST TKFCYYNNY+L QPRY+CK+CRRYWT+GG+LR+VPVGGG+
Sbjct: 27 EPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCRRYWTQGGTLRDVPVGGGT 78
>sp|O22967|CDF4_ARATH Cyclic dof factor 4 OS=Arabidopsis thaliana GN=CDF4 PE=2 SV=1
Length = 170
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 3/82 (3%)
Query: 20 EEVVSNTCNSSSSSRPPMLERKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCR 79
E+ + SSSSS L + RP + + CPRC S TKFCY+NNY++ QPR+FCK C
Sbjct: 33 EQEATIAVRSSSSSD---LTAEKRPDKIIACPRCKSMETKFCYFNNYNVNQPRHFCKGCH 89
Query: 80 RYWTEGGSLRNVPVGGGSRKNK 101
RYWT GG+LRNVPVG G RK+K
Sbjct: 90 RYWTAGGALRNVPVGAGRRKSK 111
>sp|Q9SUB0|DOF43_ARATH Dof zinc finger protein DOF4.3 OS=Arabidopsis thaliana GN=DOF4.3
PE=3 SV=1
Length = 232
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 48/65 (73%)
Query: 50 CPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSISSSAA 109
C RC+S NTKFCYYNNYS QPRYFCK CRRYWT GG+LRNVP+GG SR + I+ +
Sbjct: 27 CARCDSDNTKFCYYNNYSEFQPRYFCKNCRRYWTHGGALRNVPIGGSSRAKRTRINQPSV 86
Query: 110 AASSS 114
A S
Sbjct: 87 AQMVS 91
>sp|P38564|MNB1A_MAIZE Dof zinc finger protein MNB1A OS=Zea mays GN=MNB1A PE=1 SV=2
Length = 238
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 46/51 (90%)
Query: 50 CPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKN 100
CPRC S +TKFCYYNNY+ +QPR+FCK CRRYWT+GG+LRNVPVGGG+RK
Sbjct: 49 CPRCASRDTKFCYYNNYNTSQPRHFCKGCRRYWTKGGTLRNVPVGGGTRKK 99
>sp|P68350|DOF15_ARATH Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana GN=DOF1.5
PE=1 SV=1
Length = 175
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 50/64 (78%)
Query: 38 LERKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGS 97
L + RP + + CPRC S TKFCY+NNY++ QPR+FCK C+RYWT GG+LRNVPVG G
Sbjct: 52 LTAEKRPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGR 111
Query: 98 RKNK 101
RK+K
Sbjct: 112 RKSK 115
>sp|O49550|DOF45_ARATH Dof zinc finger protein DOF4.5 OS=Arabidopsis thaliana GN=DOF4.5
PE=3 SV=1
Length = 249
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 49/73 (67%)
Query: 50 CPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSISSSAA 109
C RC+S NTKFCYYNNY QPRYFCK CRRYWT GG+LRN+P+GG SR + ++ +
Sbjct: 27 CARCDSDNTKFCYYNNYCEFQPRYFCKNCRRYWTHGGALRNIPIGGSSRAKRARVNQPSV 86
Query: 110 AASSSNNNNNNNN 122
A S NN
Sbjct: 87 ARMVSVETQRGNN 99
>sp|Q9SUB1|DOF42_ARATH Dof zinc finger protein DOF4.2 OS=Arabidopsis thaliana GN=DOF4.2
PE=3 SV=1
Length = 194
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 33/50 (66%)
Query: 50 CPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRK 99
CPRC S T+F Y+NN +QPRY CK C R WT GG LRN+PV G K
Sbjct: 23 CPRCYSDQTRFSYFNNNKKSQPRYKCKNCCRCWTHGGVLRNIPVTGICDK 72
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.127 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 120,128,985
Number of Sequences: 539616
Number of extensions: 5178867
Number of successful extensions: 85942
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 289
Number of HSP's that attempted gapping in prelim test: 30109
Number of HSP's gapped (non-prelim): 24410
length of query: 309
length of database: 191,569,459
effective HSP length: 117
effective length of query: 192
effective length of database: 128,434,387
effective search space: 24659402304
effective search space used: 24659402304
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)