BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021642
(309 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359486310|ref|XP_002281756.2| PREDICTED: uncharacterized protein LOC100251921 [Vitis vinifera]
Length = 304
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 246/307 (80%), Positives = 263/307 (85%), Gaps = 12/307 (3%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDR+G TRLYVGRL+SRTRSRDLE++FSRYGR+RDVDMK DFAFVEFSDPRDADDA
Sbjct: 1 MPRYDDRHGSTRLYVGRLSSRTRSRDLEDLFSRYGRVRDVDMKHDFAFVEFSDPRDADDA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
RYSLNGRD DGSRIIVEFA+GGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG
Sbjct: 61 RYSLNGRDFDGSRIIVEFAKGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKL-RPRSY----SRSPSPRRGRSRSRSYSRGRSDSR 175
DWKNKCYRCGERGHIERNCQNSPKKL R RSY S R RSRSRSYSR RS S+
Sbjct: 121 DWKNKCYRCGERGHIERNCQNSPKKLKRGRSYSRSPSPRRGRSRSRSRSRSYSRSRSYSQ 180
Query: 176 SRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTPDERSPQDQRSPSPR 235
RS KR+RS ER ERR+RSP DSRSPKRR+ SPP SKGRKRSPTPDERSP+ +RSPSPR
Sbjct: 181 PRSSPKRERSAERLERRSRSPHDSRSPKRRKASPPPSKGRKRSPTPDERSPK-ERSPSPR 239
Query: 236 DRRQ-ANGSEYSGSPRGKSRSPVDDA--DGPEDRNY-RSPPEENGRSRSRSLSPVPRDDR 291
DR+Q NGS+YS SPR KSRSP DA D P DRNY RSP EENG SRS SP+PRDD
Sbjct: 240 DRKQTTNGSDYSDSPRVKSRSPALDAERDSPRDRNYRRSPDEENG--HSRSPSPIPRDDA 297
Query: 292 SPIDDDD 298
SP+DDD+
Sbjct: 298 SPVDDDE 304
>gi|356572371|ref|XP_003554342.1| PREDICTED: uncharacterized protein LOC100789337 [Glycine max]
Length = 297
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 207/309 (66%), Positives = 234/309 (75%), Gaps = 28/309 (9%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDD+YG TRLYVGRL+SRTRSRDLE +FSRYGRIR VDMK DFAFVEFSDPRDADDA
Sbjct: 1 MPRYDDKYGNTRLYVGRLSSRTRSRDLERVFSRYGRIRGVDMKNDFAFVEFSDPRDADDA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
RYSL+GRDV+GSRIIVEFA+GGPR GSRE LGRG PPGSGRCFNCGIDGHWARDCKAG
Sbjct: 61 RYSLDGRDVEGSRIIVEFAKGGPR---GSRENLGRGLPPGSGRCFNCGIDGHWARDCKAG 117
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKL--RPRSYSRSP----SPRRGRSRSRSYSRGRSDS 174
DWKNKCYRCGERGHIE+NC+NSPKK RS SRSP SPRRGRSR RSYSR R+ S
Sbjct: 118 DWKNKCYRCGERGHIEKNCKNSPKKSSRHGRSLSRSPVRSHSPRRGRSRDRSYSRDRNYS 177
Query: 175 RSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTPDERSPQDQRSPSP 234
RSRSPV+R+RS + R SP SK RK S +PD+ SP+ + P+P
Sbjct: 178 RSRSPVRRERSPVSED--------------RSQSPEPSKIRKHSTSPDQSSPRKRGDPAP 223
Query: 235 RDRRQA---NGSEYSGSPRGKSRSPVDDADGPEDRNYRSPPEENGRSRSRSLSPVPRDDR 291
+ R A +GS+YS PRGKSRSP A ++ NY S P+ +GRS S S SP DDR
Sbjct: 224 GNDRLATLQDGSDYSDGPRGKSRSPASPARDHDEGNYDS-PKASGRSHSPSRSPR-EDDR 281
Query: 292 SPIDDDDNH 300
SPID+DD++
Sbjct: 282 SPIDEDDDN 290
>gi|225439817|ref|XP_002277105.1| PREDICTED: uncharacterized protein LOC100258584 [Vitis vinifera]
Length = 307
Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 229/315 (72%), Positives = 255/315 (80%), Gaps = 16/315 (5%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDRYG TRLYVGRL+SRTR+RDLE +FSRYGR+RDVDMK DFAFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRTRDLESLFSRYGRVRDVDMKHDFAFVEFSDPRDADDA 60
Query: 61 RYSLNGRDVDGSRIIVEFAR-GGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKA 119
RY+LNGRD DGSRIIVEFA+ G G GGSREYLGRGPPPGSGRCFNCGIDGHWARDCKA
Sbjct: 61 RYNLNGRDFDGSRIIVEFAKGGPRGGSGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKA 120
Query: 120 GDWKNKCYRCGERGHIERNCQNSPKKL--RPRSYSRSP-SPRRGRSRSRSYSRGRSDSRS 176
GDWKNKCYRCGERGHIERNCQNSP+KL RSYSRSP R GRSRSRSYS RS SRS
Sbjct: 121 GDWKNKCYRCGERGHIERNCQNSPRKLSRHGRSYSRSPVRSRHGRSRSRSYSPSRSYSRS 180
Query: 177 RSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTPDERSPQDQRSPSPRD 236
RSP KRDRS+ER ++R+ SPR RSP+ +R S P+SK RKRSPTP++ PQ++ SP+
Sbjct: 181 RSPPKRDRSIER-DKRSGSPR-YRSPEPKRRSTPTSKPRKRSPTPEDSRPQERISPNVYK 238
Query: 237 RRQANGSEYSGSPRGKSRSPV-DDADGPEDRNYRSPPEENGRSRSRSLSPVPRDDRSPID 295
R Q EYS SPR KSRSPV + D P R YRSP + NGRSRS+S PRD+RSP+D
Sbjct: 239 REQP---EYSQSPREKSRSPVSSERDSPVARRYRSPSDANGRSRSQS----PRDERSPLD 291
Query: 296 DDD--NHGDPRGSES 308
+D+ N PRGSES
Sbjct: 292 EDEDNNSRSPRGSES 306
>gi|147774947|emb|CAN60012.1| hypothetical protein VITISV_036556 [Vitis vinifera]
Length = 306
Score = 343 bits (880), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 208/315 (66%), Positives = 242/315 (76%), Gaps = 17/315 (5%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDRYG TRLYVGRL+SRTR+RDLE +FSRYGR+RDVDMK DFAFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRTRDLESLFSRYGRVRDVDMKHDFAFVEFSDPRDADDA 60
Query: 61 RYSLNGRDVDGSRIIVEFAR-GGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKA 119
RY+LNGRD DGSRIIVEFA+ G G GGSREYLGRGPPPGSGRCFNCGIDGHWARDCKA
Sbjct: 61 RYNLNGRDFDGSRIIVEFAKGGPRGGSGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKA 120
Query: 120 GDWKNKCYRCGERGHIERNCQNSPKKLRPR---SYSRSPSPRRGRSRSRSYSRGRSDSRS 176
GDWKNKCYRCGERGHIERNCQNSP+KL ++ + + ++ + + S
Sbjct: 121 GDWKNKCYRCGERGHIERNCQNSPRKLSDMDGVTHDLQLDLAMAGAGAEVIAQV-AVTGS 179
Query: 177 RSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTPDERSPQDQRSPSPRD 236
RSP KRDRS+ER ++R+ SPR RSP+ +R S P+SK RKRSPTP++ PQ++ SP+
Sbjct: 180 RSPPKRDRSIER-DKRSGSPR-YRSPEPKRRSTPTSKPRKRSPTPEDSRPQERISPNVYK 237
Query: 237 RRQANGSEYSGSPRGKSRSPV-DDADGPEDRNYRSPPEENGRSRSRSLSPVPRDDRSPI- 294
R Q EYS SPR KSRSPV + D P R YRSP + NGRSRS+S PRD+RSP+
Sbjct: 238 REQP---EYSQSPREKSRSPVSSERDSPVARRYRSPSDANGRSRSQS----PRDERSPLD 290
Query: 295 -DDDDNHGDPRGSES 308
D+DBN PRGSES
Sbjct: 291 EDEDBNSRSPRGSES 305
>gi|449451689|ref|XP_004143594.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
1 [Cucumis sativus]
gi|449451691|ref|XP_004143595.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
2 [Cucumis sativus]
gi|449507559|ref|XP_004163066.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
1 [Cucumis sativus]
gi|449507562|ref|XP_004163067.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
2 [Cucumis sativus]
Length = 309
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 236/310 (76%), Positives = 265/310 (85%), Gaps = 11/310 (3%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDRYGGTRLYVGRL+SRTRSRDL+++FSRYGR+RDVDMKRD+AFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
RYSLNGRDV GSRIIVE A+G PRGPGGSREYLGRGPP G+GRCFNCGIDGHWARDCKAG
Sbjct: 61 RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPP-GTGRCFNCGIDGHWARDCKAG 119
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKLRPRSYSRSPSPRRGRSRSRSYSRGRSDSRSRSPV 180
DWKNKCYRCGERGHIE+NCQNSPKKL+ SYSRSPSPRRGRSRSRSYSRGRS SRSRSPV
Sbjct: 120 DWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPV 179
Query: 181 KRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTPDERSPQD--QRSPSPRDRR 238
KRDRS+ER ++R+RSPR SPKR SPP K KRSPTPDERSP++ +RS SP +R
Sbjct: 180 KRDRSLERSDKRSRSPRGRSSPKRHSLSPP-PKAMKRSPTPDERSPEEDARRSLSPGNRD 238
Query: 239 QANGSEYSGSPRGKSRSPVD---DADGPEDRNYRSPPEENGRSRSRSLSPVPRDDRSPID 295
+ S SPRG+SRSP+D D +G RNYR EENG SRS SP+PR++RSP++
Sbjct: 239 SRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRR--EENG--YSRSPSPLPREERSPVN 294
Query: 296 DDDNHGDPRG 305
D+DN+G PRG
Sbjct: 295 DEDNNGSPRG 304
>gi|297736448|emb|CBI25319.3| unnamed protein product [Vitis vinifera]
Length = 278
Score = 336 bits (861), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 204/244 (83%), Positives = 217/244 (88%), Gaps = 6/244 (2%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDR+G TRLYVGRL+SRTRSRDLE++FSRYGR+RDVDMK DFAFVEFSDPRDADDA
Sbjct: 33 MPRYDDRHGSTRLYVGRLSSRTRSRDLEDLFSRYGRVRDVDMKHDFAFVEFSDPRDADDA 92
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
RYSLNGRD DGSRIIVEFA+GGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG
Sbjct: 93 RYSLNGRDFDGSRIIVEFAKGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 152
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKL-RPRSY----SRSPSPRRGRSRSRSYSRGRSDSR 175
DWKNKCYRCGERGHIERNCQNSPKKL R RSY S R RSRSRSYSR RS S+
Sbjct: 153 DWKNKCYRCGERGHIERNCQNSPKKLKRGRSYSRSPSPRRGRSRSRSRSRSYSRSRSYSQ 212
Query: 176 SRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTPDERSPQDQRSPSPR 235
RS KR+RS ER ERR+RSP DSRSPKRR+ SPP SKGRKRSPTPDERSP+ +RSPSPR
Sbjct: 213 PRSSPKRERSAERLERRSRSPHDSRSPKRRKASPPPSKGRKRSPTPDERSPK-ERSPSPR 271
Query: 236 DRRQ 239
D+RQ
Sbjct: 272 DQRQ 275
>gi|363807264|ref|NP_001242616.1| uncharacterized protein LOC100813237 [Glycine max]
gi|255647309|gb|ACU24121.1| unknown [Glycine max]
Length = 299
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 204/311 (65%), Positives = 229/311 (73%), Gaps = 29/311 (9%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDD+YG TRLYVGRL+SRTRSRDLE +FSRYGR+R VDMK DFAFVEFSDPRDADDA
Sbjct: 1 MPRYDDKYGNTRLYVGRLSSRTRSRDLERVFSRYGRVRGVDMKNDFAFVEFSDPRDADDA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
RY+L+GRDV+GSRIIVEFA+GGPRG REY+GRGPPPGSGRCFNCGIDGHWARDCKAG
Sbjct: 61 RYNLDGRDVEGSRIIVEFAKGGPRG-SRDREYMGRGPPPGSGRCFNCGIDGHWARDCKAG 119
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKL--RPRSYSRSPSPRRGRSRS----RSYSRGRSDS 174
DWKNKCYRCGERGHIE+NC+NSPKKL R RS SRSP R R RSYSR S S
Sbjct: 120 DWKNKCYRCGERGHIEKNCKNSPKKLSQRGRSLSRSPVRSRSPRRGRSTDRSYSRDHSYS 179
Query: 175 RSRSPVKRDRS-VERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTPDERSPQDQRSPS 233
RSRSPV+R+RS V ++R P SK RK S +PD+ SP+ + S
Sbjct: 180 RSRSPVRRERSPVSEDRSQSREP---------------SKIRKHSASPDQSSPRKRGDTS 224
Query: 234 PRDRRQA---NGSEYSGSPRGKSRSPVDDADGPEDRNYRSPPEENGRSRSRSLSPVPRDD 290
P + R A +GS+YS PRGKSRSP A ++ Y S P+ NG SRS S SP DD
Sbjct: 225 PGNDRLATHQDGSDYSDGPRGKSRSPASPARDRDEGGYDS-PKVNGHSRSPSRSPRD-DD 282
Query: 291 RSPID-DDDNH 300
RSPID DDDNH
Sbjct: 283 RSPIDEDDDNH 293
>gi|255568494|ref|XP_002525221.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223535518|gb|EEF37187.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 305
Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 210/302 (69%), Positives = 230/302 (76%), Gaps = 26/302 (8%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRY+DRY TRLYVG LASRTRSRDLE +FS+YGR+RDVDMKRD+AFVEFSDPRDADDA
Sbjct: 1 MPRYEDRYANTRLYVGHLASRTRSRDLEYLFSKYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
RY L+G+D+DGSRIIVEFA+G PR GSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG
Sbjct: 61 RYHLDGKDLDGSRIIVEFAKGVPR---GSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 117
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRGRSRS-RSYSRGRSDSRSRS 178
DWKNKCYRCGERGHIERNC+NSPKKL R RSYSRSPSPRRGRSRS
Sbjct: 118 DWKNKCYRCGERGHIERNCKNSPKKLKRGRSYSRSPSPRRGRSRSPSYSRGRSYSRSRSP 177
Query: 179 PVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTPDERSPQDQRSPSPRDRR 238
P KR+RS E +R SR PK N P SKGRKRSPTPDE SP+ PSP+ R+
Sbjct: 178 PPKRERSFENEDRSL-----SREPK---NGVP-SKGRKRSPTPDEGSPR----PSPKSRK 224
Query: 239 ---QANGSEYSGSPRGKSRSPVDDADGPEDRNYRSPPEENGRSRSRSLSPVPRDDRSPID 295
Q + S+YSGSPR +SRSP D P D Y SP + NGRSRS S S PRD RSP+D
Sbjct: 225 LDDQQDRSDYSGSPR-RSRSP--DRKSPGDGRYGSPAQTNGRSRSPSPS--PRDGRSPVD 279
Query: 296 DD 297
DD
Sbjct: 280 DD 281
>gi|388495254|gb|AFK35693.1| unknown [Lotus japonicus]
Length = 300
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 208/319 (65%), Positives = 230/319 (72%), Gaps = 44/319 (13%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDD+YG TRLYVGRL+SRTRSRDLE +FSRYGR+RDVDMKRD+AFVEFSDPRDADDA
Sbjct: 1 MPRYDDKYGNTRLYVGRLSSRTRSRDLERVFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSRE-------YLGRGPPPGSGRCFNCGIDGHW 113
RY+L+GRDVDGSR+IVEFA+G PRG Y+GRGPPPGSGRCFNCGIDGHW
Sbjct: 61 RYNLDGRDVDGSRLIVEFAKGVPRGSREGGGGRDRDREYMGRGPPPGSGRCFNCGIDGHW 120
Query: 114 ARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL--RPRSYSRSP----SPRRGRSRSRSY 167
ARDCKAGDWKNKCYRCGERGHIE+NC+NSPKKL PRS SRSP SPRRGRSR RSY
Sbjct: 121 ARDCKAGDWKNKCYRCGERGHIEKNCKNSPKKLSRHPRSDSRSPVRSRSPRRGRSRDRSY 180
Query: 168 SRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTPDERSPQ 227
+ RS SRSRSPV+RDRS P+ R SPP S+ RK S +PD SPQ
Sbjct: 181 TPERSYSRSRSPVRRDRSP--------------FPEDRSRSPP-SRTRKHSLSPDLDSPQ 225
Query: 228 DQRSPSP--RDRRQA--NGSEYSGSPRGKSRSPVDDADGPEDRNYRSPPEENGRSRSRSL 283
+ SP DR +GS+YS R KSRSP D D SP +NGRSRS S
Sbjct: 226 KRSDASPPGNDRLATTRDGSDYSDDARAKSRSPARDLDD------DSPKADNGRSRSAS- 278
Query: 284 SPVPR-DDRSPI-DDDDNH 300
PR DDRSPI +DDDNH
Sbjct: 279 ---PRDDDRSPIEEDDDNH 294
>gi|356572373|ref|XP_003554343.1| PREDICTED: uncharacterized protein LOC100789862 [Glycine max]
Length = 287
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 210/315 (66%), Positives = 231/315 (73%), Gaps = 36/315 (11%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDD+YG TRLYVG L+SRTRSRDLE FSRYGR+R VDMK DFAFV+FSDPRDADDA
Sbjct: 1 MPRYDDKYGNTRLYVGHLSSRTRSRDLERAFSRYGRVRGVDMKNDFAFVDFSDPRDADDA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
RY+L+GRDVDGSRIIVEFA+G PR GSREYLGRGPPPGSGRCFNCG+DGHWARDCKAG
Sbjct: 61 RYNLDGRDVDGSRIIVEFAKGAPR---GSREYLGRGPPPGSGRCFNCGLDGHWARDCKAG 117
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKL---RPRSYSRSP----SPRRGRSRSRSYSRGRSD 173
DWKNKCYRCGERGHIERNC+NSPKKL R RSYSRSP SP RGRSR RSYSR RS
Sbjct: 118 DWKNKCYRCGERGHIERNCKNSPKKLSTRRGRSYSRSPVRSRSPHRGRSRDRSYSRDRSY 177
Query: 174 SRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTPDERSPQDQRSPS 233
SRSRSPV+R+ S R E R++SP +NSP SK RK SP+PD RSPQ + S
Sbjct: 178 SRSRSPVRREESPVR-EDRSQSP-------DHKNSPQPSKTRKHSPSPD-RSPQKRGDTS 228
Query: 234 PRDRRQANGSEYSGSPRGKSRSPVDDADGPEDRNYRSPPEENGRSRSRSLSPVPRDDRSP 293
P + R SRSP D PEDR Y S P+ NGRS S S SP D
Sbjct: 229 PDNDRL-------------SRSPARD---PEDRGYDS-PKVNGRSGSPSCSPRDDDRSPI 271
Query: 294 IDDDDNHGDPRGSES 308
DD+++ PRGSES
Sbjct: 272 DDDNNHRHSPRGSES 286
>gi|356505156|ref|XP_003521358.1| PREDICTED: uncharacterized protein LOC100812698 [Glycine max]
Length = 287
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 199/323 (61%), Positives = 217/323 (67%), Gaps = 52/323 (16%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDD+YG TRLYVG L+SRTRSRDLE FSRYGR+R VDMK DFAFV+FSDPRDADDA
Sbjct: 1 MPRYDDKYGNTRLYVGHLSSRTRSRDLERAFSRYGRVRGVDMKNDFAFVDFSDPRDADDA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
RY+L+GRDVDGSRIIVEFA+G PR GSREYLGRGPPPGSGRCFNCG+DGHWARDCKAG
Sbjct: 61 RYNLDGRDVDGSRIIVEFAKGAPR---GSREYLGRGPPPGSGRCFNCGLDGHWARDCKAG 117
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKL---RPRSYSRSP-----------SPRRGRSRSRS 166
DWKNKCYRCGERGHIERNC+NSPKKL R RSYSRSP R
Sbjct: 118 DWKNKCYRCGERGHIERNCKNSPKKLSTRRGRSYSRSPVRSHSPRRGRSRDRSYSRDRSY 177
Query: 167 YSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTPDERSP 226
R SPV+ DR S+SP+ +NSP SK RK SP+PD RSP
Sbjct: 178 SRSRSPVRREESPVREDR--------------SQSPQ-HKNSPQPSKTRKHSPSPD-RSP 221
Query: 227 QDQRSPSPRDRRQANGSEYSGSPRGKSRSPVDDADGPEDRNYRSPPEENGRSRSRSLSPV 286
Q + SP + R SRSP D EDR Y S P+ NGRS S S SP
Sbjct: 222 QRRGDTSPDNDRL-------------SRSPARDR---EDRGYDS-PKVNGRSGSPSRSPR 264
Query: 287 PRDDRSPIDDDDNH-GDPRGSES 308
DDRSPIDD+DNH PRGSES
Sbjct: 265 D-DDRSPIDDEDNHRHSPRGSES 286
>gi|125550625|gb|EAY96334.1| hypothetical protein OsI_18237 [Oryza sativa Indica Group]
Length = 331
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 206/314 (65%), Positives = 234/314 (74%), Gaps = 24/314 (7%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDRYG TRLYVGRL+SRTRSRDLE FSRYGRIR+V++KRD+AF+EFSDPRDA++A
Sbjct: 9 MPRYDDRYGSTRLYVGRLSSRTRSRDLEYHFSRYGRIREVELKRDYAFIEFSDPRDAEEA 68
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
RY+L+GRDVDGSRI+VEFA+G PRGPGGSREY+GRGPPPG+GRCFNCGIDGHWARDCKAG
Sbjct: 69 RYNLDGRDVDGSRILVEFAKGVPRGPGGSREYMGRGPPPGTGRCFNCGIDGHWARDCKAG 128
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRGRSRSRSYSRGRSDSRSRSP 179
DWKNKCYRCGERGHIERNCQNSP+ L R RSYSRSPSPRRGR RSRSYSR RS SRS S
Sbjct: 129 DWKNKCYRCGERGHIERNCQNSPRNLRRERSYSRSPSPRRGRGRSRSYSRSRSRSRSYSR 188
Query: 180 VKRDRSVERFERR---TRSPRDSRSPKRRRNSPPSSKGRKRSPTPD----ERSPQDQRSP 232
+ R RS S S RR+ P++ +KRSPTPD RSPQDQ SP
Sbjct: 189 SRSRSLSGSPRARRELERSRSLSYSRSPRRSISPAANEKKRSPTPDGSRSPRSPQDQVSP 248
Query: 233 SPRDRRQANGSEYSGSPRGK--SRSPVDDADGPEDRNYRSPPEENGRSRSRSLSPVPRDD 290
P+D + NGS++ SPRG+ SRSP D YRSP NGR SP PR++
Sbjct: 249 PPKDNAERNGSDHGDSPRGRENSRSPSD--------GYRSPAAANGR------SPSPRNN 294
Query: 291 RSPIDDDDNHGDPR 304
SP D+ PR
Sbjct: 295 GSPSPMDNGSRSPR 308
>gi|242089323|ref|XP_002440494.1| hypothetical protein SORBIDRAFT_09g001910 [Sorghum bicolor]
gi|241945779|gb|EES18924.1| hypothetical protein SORBIDRAFT_09g001910 [Sorghum bicolor]
gi|448878296|gb|AGE46111.1| arginine/serine-rich splicing factor RS2Z39 [Sorghum bicolor]
Length = 341
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 209/327 (63%), Positives = 236/327 (72%), Gaps = 21/327 (6%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDRYGGTRLYVGRLA RTRSRDLE +F RYGRIR+V++KRD+AF+EFSD RDAD+A
Sbjct: 1 MPRYDDRYGGTRLYVGRLAPRTRSRDLEYLFGRYGRIREVELKRDYAFIEFSDHRDADEA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
RY L+GRDVDGSRI+VEFA+G PRGPGGSREY+GRGPPPG+GRCFNCGIDGHWARDCKAG
Sbjct: 61 RYQLDGRDVDGSRIVVEFAKGVPRGPGGSREYMGRGPPPGTGRCFNCGIDGHWARDCKAG 120
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRG--------RSRSRSYSRGR 171
DWKNKCYRCGERGHIERNCQNSP+ + R RSYSRSPSPRRG RSRSRS SR
Sbjct: 121 DWKNKCYRCGERGHIERNCQNSPRSVRRERSYSRSPSPRRGRGRSPSYSRSRSRSRSRSY 180
Query: 172 SDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTPD------ERS 225
S SRS S R +R +RR+RS SRSP R + PP K +RSPTPD RS
Sbjct: 181 SRSRSLSGSPRGGRRDRDDRRSRSLSYSRSPMRSASPPPKEK--ERSPTPDGSRSPRSRS 238
Query: 226 PQDQ-RSPSPRDRRQANGSEYSGSPRGKSRSPVDDADGPEDRNYRSPPEENGRSRS--RS 282
PQDQ SP P+D + NGS+ SPRG+ S + RS P NGRS S
Sbjct: 239 PQDQVMSPPPKDNGEGNGSDRGESPRGRETSRSRSRSRSPSGDNRS-PAANGRSPSPRGD 297
Query: 283 LSPVPRDDRSPIDDDDNHGDPRGSESN 309
SP PR DRSP D P+G+ +N
Sbjct: 298 RSPSPRADRSPSPKADRSPSPKGNGNN 324
>gi|115461779|ref|NP_001054489.1| Os05g0120100 [Oryza sativa Japonica Group]
gi|113578040|dbj|BAF16403.1| Os05g0120100 [Oryza sativa Japonica Group]
gi|222630005|gb|EEE62137.1| hypothetical protein OsJ_16924 [Oryza sativa Japonica Group]
Length = 323
Score = 303 bits (777), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 197/315 (62%), Positives = 224/315 (71%), Gaps = 26/315 (8%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDRYG TRLYVGRL+SRTRSRDLE FSRYGRIR+V++KRD+AF+EFSDPRDA++A
Sbjct: 1 MPRYDDRYGSTRLYVGRLSSRTRSRDLEYHFSRYGRIREVELKRDYAFIEFSDPRDAEEA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
RY+L+GRDVDGSRI+VEFA+G PRGPGGSREY+GRGPPPG+GRCFNCGIDGHWARDCKAG
Sbjct: 61 RYNLDGRDVDGSRILVEFAKGVPRGPGGSREYMGRGPPPGTGRCFNCGIDGHWARDCKAG 120
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKL-RPRSYS----RSPSPRRGRSRSRSYSRGRSDSR 175
DWKNKCYRCGERGHIERNCQNSP+ L R RSYS R RS SRS SR RS SR
Sbjct: 121 DWKNKCYRCGERGHIERNCQNSPRNLRRERSYSCSPSPRRGRGRSRSYSRSRSRSRSYSR 180
Query: 176 SRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTPD----ERSPQDQRS 231
SRS R E RR SP +++ +KRSPTPD RSPQDQ S
Sbjct: 181 SRSRSLSGSPRARRELERSRSLSYSRSPRRSISPAANE-KKRSPTPDGSRSPRSPQDQVS 239
Query: 232 PSPRDRRQANGSEYSGSPRGK--SRSPVDDADGPEDRNYRSPPEENGRSRSRSLSPVPRD 289
P P+D + NGS++ SPRG+ SRSP D YRSP NGR SP PR+
Sbjct: 240 PPPKDNAERNGSDHGDSPRGRENSRSPSD--------GYRSPAAANGR------SPSPRN 285
Query: 290 DRSPIDDDDNHGDPR 304
+ SP D+ PR
Sbjct: 286 NGSPSPMDNGSRSPR 300
>gi|388509088|gb|AFK42610.1| unknown [Medicago truncatula]
Length = 305
Score = 293 bits (751), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 199/324 (61%), Positives = 225/324 (69%), Gaps = 50/324 (15%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDD+YG TRLYVGRL+SRTRSRDLE +FSRYG +RDVDMK D+AFVEF DPRDADDA
Sbjct: 1 MPRYDDKYGNTRLYVGRLSSRTRSRDLERVFSRYGSVRDVDMKHDYAFVEFRDPRDADDA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSR---EYLGRGPPPGSGRCFNCGIDGHWARDC 117
RY+L+GRD+DGSR+IVEFA+G PRG SR EYLGRGPPPGSGRCFNCGIDGHWARDC
Sbjct: 61 RYNLDGRDIDGSRLIVEFAKGVPRGSRDSRDSREYLGRGPPPGSGRCFNCGIDGHWARDC 120
Query: 118 KAGDWKNKCYRCGERGHIERNCQNSPKKL--RPRSYSRSPSPRRGRSRSRSYSR------ 169
KAGDWKNKCYRCGERGHIE+NC+NSPKKL RS SRSP R +RSRS +R
Sbjct: 121 KAGDWKNKCYRCGERGHIEKNCKNSPKKLSRHARSVSRSPGRSRSPARSRSPARSRSPRR 180
Query: 170 ----------GRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSP 219
RS SRSRSPV+RDRS + R SPP SK RK S
Sbjct: 181 GRSRDRSYSPARSYSRSRSPVRRDRSPVASD--------------RSRSPPPSKSRKYSR 226
Query: 220 TPDERSPQDQRSPSPRDRRQA--NGSEYSGSPRGKSRSPVDDADGPEDRNYRSPPEENGR 277
+P + SPQ SP DR A +GS+YS R KSRSP D D P+ NGR
Sbjct: 227 SP-KGSPQKSTSPG-NDRVVATQDGSDYSDGARVKSRSPSRDND--------DSPKANGR 276
Query: 278 SRSRSLSPVPRD-DRSPIDDDDNH 300
SRSRS S PRD DRSP+++DD++
Sbjct: 277 SRSRSRS--PRDEDRSPVEEDDDN 298
>gi|218192579|gb|EEC75006.1| hypothetical protein OsI_11073 [Oryza sativa Indica Group]
Length = 294
Score = 293 bits (751), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 184/313 (58%), Positives = 214/313 (68%), Gaps = 33/313 (10%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDD YG TRLYVGRL+SRTRSRDLE +F RYGRIR+V++KRD+AF+EFSD RDAD+A
Sbjct: 1 MPRYDDHYGSTRLYVGRLSSRTRSRDLEYLFGRYGRIREVELKRDYAFIEFSDTRDADEA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRG-PGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKA 119
RY+L+GRDVDGSRI+VEFA+G PRG GGSREY+GRGPPPG+GRCFNCGIDGHWARDCKA
Sbjct: 61 RYNLDGRDVDGSRILVEFAKGVPRGAAGGSREYMGRGPPPGTGRCFNCGIDGHWARDCKA 120
Query: 120 GDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRGRSRSRSYSRGRSDSRSRS 178
GDWKNKCYRCGERGHIERNCQNSP+ L R RSYSRSPS R
Sbjct: 121 GDWKNKCYRCGERGHIERNCQNSPRNLRRERSYSRSPS-------PRRGRGHGRSRSYSR 173
Query: 179 PVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTPD----ERSPQDQRSPSP 234
R R RS S S RR+ P++ G++RSP+P+ RSPQD+ SP P
Sbjct: 174 SRSRSYRGRRDRDDRRSRSLSYSRSPRRSISPAANGKERSPSPNGRRSPRSPQDRVSPPP 233
Query: 235 RDRRQANGSEYSGSPRGK--SRSPVDDADGPEDRNYRSPPEENGRSRSRSLSPVPRDDRS 292
+D + NG SPRG+ SRSP D YRSP NGR SP P+++ S
Sbjct: 234 KDNDEHNGD----SPRGRENSRSPSD--------GYRSPVAANGR------SPSPKNNGS 275
Query: 293 PIDDDDNHGDPRG 305
P D+N PRG
Sbjct: 276 PSPMDNNSRSPRG 288
>gi|195611398|gb|ACG27529.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|223973611|gb|ACN30993.1| unknown [Zea mays]
gi|413942175|gb|AFW74824.1| Splicing factor, arginine/serine-rich 7 isoform 1 [Zea mays]
gi|413942176|gb|AFW74825.1| Splicing factor, arginine/serine-rich 7 isoform 2 [Zea mays]
gi|448878178|gb|AGE46052.1| arginine/serine-rich splicing factor RS2Z37B transcript I [Zea
mays]
Length = 333
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 191/305 (62%), Positives = 217/305 (71%), Gaps = 19/305 (6%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDRYGGTRLYVGRLA RTRSRDLE +F +YGRIR+V++KRD+AF+EFS+ RDAD+A
Sbjct: 1 MPRYDDRYGGTRLYVGRLAPRTRSRDLEYLFGKYGRIREVELKRDYAFIEFSEHRDADEA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
RY L+GRDVDGSRI+VEFA+G PRGPGGSREY+GRGPPPG+GRCFNCG+DGHWARDCKAG
Sbjct: 61 RYQLDGRDVDGSRIVVEFAKGVPRGPGGSREYMGRGPPPGTGRCFNCGMDGHWARDCKAG 120
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRGRSRSRSYSRGRSDSRSRSP 179
DWKNKCYRCGERGHIERNCQNSP+ + R RSYSRSPSPRRGR RS SYSR RS SRSRS
Sbjct: 121 DWKNKCYRCGERGHIERNCQNSPRSVRRERSYSRSPSPRRGRGRSPSYSRSRSRSRSRSY 180
Query: 180 VKRDRSVERFERRTRSPRDSRSPKRRRNSPPS----SKGRKRSPTPD------ERSPQDQ 229
+ R D RS + P +K ++RSPTP RSPQDQ
Sbjct: 181 SRSRSLSGSPRGGRRDRDDRRSRSLSYSRSPMRSPPAKEKERSPTPGGSRSPRSRSPQDQ 240
Query: 230 -RSPSPRDRRQANGSEYSGSPRGKSRSPVDDADGPEDRNYRSPPEENGRSRSRSLSPVPR 288
SP P+D NGS+ SPRG+ S RS P NGR SP PR
Sbjct: 241 VMSPPPKDNGDRNGSDRGDSPRGRENSRSRSRSRSPSGGNRS-PAANGR------SPSPR 293
Query: 289 DDRSP 293
DR+P
Sbjct: 294 GDRTP 298
>gi|224138530|ref|XP_002322837.1| predicted protein [Populus trichocarpa]
gi|222867467|gb|EEF04598.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 149/178 (83%), Positives = 159/178 (89%), Gaps = 9/178 (5%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDRY TRLYVG LA+RTRSRDLE +FS+YGR+RDVDMKRD+AFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYASTRLYVGHLAARTRSRDLEHLFSKYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
R+ L+G+D DGSRIIVEFA+G PRG SREYLGRGPPPGSGRCFNCGIDGHWARDCKAG
Sbjct: 61 RHYLDGKDFDGSRIIVEFAKGVPRG---SREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 117
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKL--RPRSYS----RSPSPRRGRSRSRSYSRGRS 172
DWKNKCYRCGERGHIERNC+NSPKKL R RSYS RSPSP RGRSRS SYSRGRS
Sbjct: 118 DWKNKCYRCGERGHIERNCKNSPKKLTKRGRSYSRSPDRSPSPHRGRSRSPSYSRGRS 175
>gi|224088597|ref|XP_002308490.1| predicted protein [Populus trichocarpa]
gi|222854466|gb|EEE92013.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 147/177 (83%), Positives = 159/177 (89%), Gaps = 8/177 (4%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDRY TRLYVG LA+RTRSRDLE +FS+YGR+RDVDMKRD+AFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYASTRLYVGHLAARTRSRDLEHLFSKYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
R+ L+G++ DGSRIIVEFA+G PR GSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG
Sbjct: 61 RHYLDGKEFDGSRIIVEFAKGVPR---GSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 117
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSP----SPRRGRSRSRSYSRGRS 172
DWKNKCYRCGERGHIERNC+NSPKKL R +SYSRSP SP RGRSRS SYSRGRS
Sbjct: 118 DWKNKCYRCGERGHIERNCKNSPKKLTRGKSYSRSPGRSRSPHRGRSRSPSYSRGRS 174
>gi|242052053|ref|XP_002455172.1| hypothetical protein SORBIDRAFT_03g005500 [Sorghum bicolor]
gi|241927147|gb|EES00292.1| hypothetical protein SORBIDRAFT_03g005500 [Sorghum bicolor]
gi|448878302|gb|AGE46114.1| arginine/serine-rich splicing factor RS2Z34 transcript I [Sorghum
bicolor]
Length = 296
Score = 289 bits (740), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 180/259 (69%), Positives = 201/259 (77%), Gaps = 22/259 (8%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRD 68
G TRLYVGR++SRTR+RDLE++F RYGR+R VDMK +FAFVEFSDPRDADDARY L+ R+
Sbjct: 22 GNTRLYVGRVSSRTRTRDLEDLFGRYGRVRYVDMKHEFAFVEFSDPRDADDARYHLDDRE 81
Query: 69 VDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYR 128
DGSR+IVEFA+G PRGPGGSREY+G+GPPPGSGRCFNCG+DGHWARDCKAGDWKN+CYR
Sbjct: 82 FDGSRLIVEFAKGIPRGPGGSREYMGKGPPPGSGRCFNCGMDGHWARDCKAGDWKNRCYR 141
Query: 129 CGERGHIERNCQNSPKKL-RPRSYSRSPSPRRGRSRSRSYSRGRSDSRSRSPVKRDRSVE 187
CG+RGHIER+CQNSPK L R RSYSRSPSPRR RS RSYSR RS SRS R S
Sbjct: 142 CGDRGHIERDCQNSPKNLRRGRSYSRSPSPRRERSPVRSYSRSRSRGYSRSRSPRQNS-- 199
Query: 188 RFERRTRSPRDSRSPKRR-------RNSPPSSKGRKRSPTPDERSPQDQRSPSPRDRRQA 240
R RSPRDSRSP+R R SP SKGR RSP SP RSP+PR+R
Sbjct: 200 ---RDERSPRDSRSPRRSPRDSRSPRRSPSLSKGRDRSP-----SPNGSRSPAPRER--- 248
Query: 241 NGSEYSGSP-RGKSRSPVD 258
NGS+YS SP R SRSP D
Sbjct: 249 NGSDYSMSPRRDDSRSPAD 267
>gi|448878298|gb|AGE46112.1| arginine/serine-rich splicing factor R2SZ35 transcript I [Sorghum
bicolor]
Length = 312
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 209/326 (64%), Positives = 232/326 (71%), Gaps = 33/326 (10%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDRYG TRLYVGRLA RTRSRDLE +FS+YGRIR+V++KRD+AF+EFSDP DADDA
Sbjct: 1 MPRYDDRYGNTRLYVGRLAPRTRSRDLEYLFSKYGRIREVELKRDYAFIEFSDPHDADDA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
+Y+L+GR+VDGSRIIVEFA+G PRG GGSREY+GRGPPPG+GRCFNCGIDGHWARDCKAG
Sbjct: 61 QYNLDGREVDGSRIIVEFAKGVPRGSGGSREYMGRGPPPGTGRCFNCGIDGHWARDCKAG 120
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRGRSRSRSYSRGRSDSRSRSP 179
DWKNKCYRCGERGHIERNCQNSP+ L R RSYSRSPSPRRGR RSRSYSR RS SRSRSP
Sbjct: 121 DWKNKCYRCGERGHIERNCQNSPRNLRRERSYSRSPSPRRGRGRSRSYSRSRSYSRSRSP 180
Query: 180 VKRDRSVERFERRTRSPRDSRSPK---RRRNSPPSSKGRKRSP----TPDERSPQDQRSP 232
R R RS S S RR SP K R R+P +P SP+D SP
Sbjct: 181 SGSPRGGRRERDERRSRSLSYSRSASPRRSVSPAKEKERSRTPDGSRSPRSPSPRDDVSP 240
Query: 233 SPRDRRQANGSEYSGSPRG-----KSRSPVDDADGPEDRNYRSPPEENGRSRSRSLSPVP 287
P+D NGS+ SP +SRSP D YRS P NGR SP P
Sbjct: 241 PPKDNGAHNGSDREDSPGARENSKRSRSPSD--------GYRS-PAANGR------SPSP 285
Query: 288 RDDRSPI-----DDDDNHGDPRGSES 308
RDDRSP DD+ G PRGS+S
Sbjct: 286 RDDRSPSPKGNNGDDERRGSPRGSQS 311
>gi|357132692|ref|XP_003567963.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like
[Brachypodium distachyon]
Length = 319
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 199/352 (56%), Positives = 220/352 (62%), Gaps = 98/352 (27%)
Query: 1 MPRYD--DRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDA 57
MPRYD DRYGG TRLYVGRL+SRTRSRDLE++F RYGR+R VDMK +FAFVEFSDPRDA
Sbjct: 1 MPRYDERDRYGGNTRLYVGRLSSRTRSRDLEDLFGRYGRVRYVDMKHEFAFVEFSDPRDA 60
Query: 58 DDARYSLNGRDVDGSRIIVEFARGGPRGPGGS--------REYLGRGPPPGSGRCFNCGI 109
DDARY+L+GRD DGSR+IVEFA+G PRG GGS REY+GRGPPPGSGRCFNCGI
Sbjct: 61 DDARYNLDGRDFDGSRMIVEFAKGVPRGQGGSRDRDRGGDREYMGRGPPPGSGRCFNCGI 120
Query: 110 DGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRGRSRSRSYS 168
DGHWARDCKAGDWKN+CYRCG+ GHIER+CQNSPK L R +SYSRSPSPRRGR R RSYS
Sbjct: 121 DGHWARDCKAGDWKNRCYRCGDSGHIERDCQNSPKNLRRGKSYSRSPSPRRGRVRDRSYS 180
Query: 169 RG--------------------------------------RSDSRSRSPVKRDRSVERFE 190
R +S SRSPVK
Sbjct: 181 RSRSRSYSRSLSPRRDERRSRSPRDSRSPRRSPRDSRSPMKSPCDSRSPVK--------- 231
Query: 191 RRTRSPRDSRSPKRRRNSPPSSKGRKRSPTPDERSPQDQRSPSPRDRRQANGSEYSGSPR 250
SPRDSRSP R SP +KGR RSPTP NGS S +PR
Sbjct: 232 ----SPRDSRSPVR---SPSPAKGRARSPTP-------------------NGSR-SPAPR 264
Query: 251 GKSRSPV-DDADGPEDRNYR-SPPEENGRSRSRSLSPVPRDDRSPIDDDDNH 300
G SRSP+ D+ P DR R P NGR SP PRDD +D+ NH
Sbjct: 265 GNSRSPMRADSPSPADRERRDVSPAANGR------SPSPRDD----EDNGNH 306
>gi|212723432|ref|NP_001132009.1| uncharacterized protein LOC100193414 [Zea mays]
gi|194693184|gb|ACF80676.1| unknown [Zea mays]
gi|413942172|gb|AFW74821.1| hypothetical protein ZEAMMB73_961242 [Zea mays]
gi|448878186|gb|AGE46056.1| arginine/serine-rich splicing factor RS2Z35 transcript I [Zea mays]
Length = 314
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 204/326 (62%), Positives = 233/326 (71%), Gaps = 33/326 (10%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDR+G TRLYVGRLA RTRSRDLE +FS+YGRIR+V++KRD+AF+EFSDPRDADDA
Sbjct: 1 MPRYDDRHGNTRLYVGRLAPRTRSRDLEYLFSKYGRIREVELKRDYAFIEFSDPRDADDA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
+Y+L+GR+VDGSRIIVEFA+G PRG GGSREY+GRGPPPG+GRCFNCG+DGHWARDCKAG
Sbjct: 61 QYNLDGREVDGSRIIVEFAKGVPRGSGGSREYMGRGPPPGTGRCFNCGMDGHWARDCKAG 120
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRGRSRSRSYSRGRSDSRSRSP 179
DWKNKCYRCGE GHIERNCQNSP+ L R +SYSRSPSPR GR RSRSYSR RS SRSRSP
Sbjct: 121 DWKNKCYRCGESGHIERNCQNSPRNLRRDKSYSRSPSPRGGRGRSRSYSRSRSYSRSRSP 180
Query: 180 VKRDRSVERFERRTRSPRDSRSPK---RRRNSPPSSKGRKRSPT----PDERSPQDQRSP 232
R R RS S S RR SP K R R+P P SP+ + SP
Sbjct: 181 SGSPRGGRRERDERRSRSLSYSRSASPRRSVSPAKEKERSRTPNGSRSPRSPSPRAEVSP 240
Query: 233 SPRDRRQANGSEYSGSPRG-----KSRSPVDDADGPEDRNYRSPPEENGRSRSRSLSPVP 287
+D NGS++ G+P G +SRSP D YRS P NGR SP P
Sbjct: 241 PLKDNGARNGSDHEGNPGGGENSKRSRSPSD--------GYRS-PVANGR------SPSP 285
Query: 288 RDDRSPI-----DDDDNHGDPRGSES 308
RDDRSP +DD+ G PRGS+S
Sbjct: 286 RDDRSPSPKGNNEDDERRGSPRGSQS 311
>gi|357134837|ref|XP_003569022.1| PREDICTED: uncharacterized protein LOC100826232 [Brachypodium
distachyon]
Length = 335
Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 133/158 (84%), Positives = 150/158 (94%), Gaps = 3/158 (1%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDRYG +RLYVGRL+SRTR+RDLE +FSRYGRIR+V++KRD+AF+E+SDPRDADDA
Sbjct: 1 MPRYDDRYGKSRLYVGRLSSRTRTRDLEYLFSRYGRIREVELKRDYAFIEYSDPRDADDA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGS--REYLGRGPPPGSGRCFNCGIDGHWARDCK 118
+Y+L+GRDVDGSRIIVEFA+G PRGPGGS REY+GRGPPPG+GRCFNCGIDGHWARDCK
Sbjct: 61 QYNLDGRDVDGSRIIVEFAKGIPRGPGGSREREYMGRGPPPGTGRCFNCGIDGHWARDCK 120
Query: 119 AGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSP 155
AGDWKNKCYRCGERGHIERNCQNSP+ L R RSYSRSP
Sbjct: 121 AGDWKNKCYRCGERGHIERNCQNSPRSLRRERSYSRSP 158
>gi|224035793|gb|ACN36972.1| unknown [Zea mays]
gi|413950156|gb|AFW82805.1| splicing factor, arginine/serine-rich 6 [Zea mays]
gi|448878164|gb|AGE46045.1| arginine/serine-rich splicing factor RS2Z39 transcript III [Zea
mays]
gi|448878166|gb|AGE46046.1| arginine/serine-rich splicing factor RS2Z39 transcript IV [Zea
mays]
Length = 353
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 125/147 (85%), Positives = 140/147 (95%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDRYGGTRLYVGRLA+RTRSRDLE +F RYGRIR+V++KRD+AF+EFSD RDAD+A
Sbjct: 1 MPRYDDRYGGTRLYVGRLATRTRSRDLEHLFGRYGRIREVELKRDYAFIEFSDHRDADEA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
RY L+GRDVDGSRI+VEFA+G PRG GGSREY+GRGPPPG+GRCFNCG+DGHWARDCKAG
Sbjct: 61 RYQLDGRDVDGSRIVVEFAKGVPRGSGGSREYMGRGPPPGTGRCFNCGVDGHWARDCKAG 120
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKLR 147
DWKNKCYRCGERGHIERNCQNSP+ LR
Sbjct: 121 DWKNKCYRCGERGHIERNCQNSPRSLR 147
>gi|115452341|ref|NP_001049771.1| Os03g0285900 [Oryza sativa Japonica Group]
gi|108707560|gb|ABF95355.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548242|dbj|BAF11685.1| Os03g0285900 [Oryza sativa Japonica Group]
gi|222624706|gb|EEE58838.1| hypothetical protein OsJ_10413 [Oryza sativa Japonica Group]
Length = 330
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 132/157 (84%), Positives = 147/157 (93%), Gaps = 2/157 (1%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDD YG TRLYVGRL+SRTRSRDLE +F RYGRIR+V++KRD+AF+EFSDPRDAD+A
Sbjct: 1 MPRYDDHYGSTRLYVGRLSSRTRSRDLEYLFGRYGRIREVELKRDYAFIEFSDPRDADEA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRG-PGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKA 119
RY+L+GRDVDGSRI+VEFA+G PRG GGSREY+GRGPPPG+GRCFNCGIDGHWARDCKA
Sbjct: 61 RYNLDGRDVDGSRILVEFAKGVPRGAAGGSREYMGRGPPPGTGRCFNCGIDGHWARDCKA 120
Query: 120 GDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSP 155
GDWKNKCYRCGERGHIERNCQNSP+ L R RSYSRSP
Sbjct: 121 GDWKNKCYRCGERGHIERNCQNSPRNLRRERSYSRSP 157
>gi|68035567|gb|AAY84873.1| alternative splicing regulator [Triticum aestivum]
Length = 333
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/158 (83%), Positives = 148/158 (93%), Gaps = 3/158 (1%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDRYG RLYVGRL+SRTRSRDLE +FS+YGRIR+V++KRD+AF+E+SDPRDAD+A
Sbjct: 1 MPRYDDRYGNARLYVGRLSSRTRSRDLEYLFSKYGRIREVELKRDYAFIEYSDPRDADEA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGS--REYLGRGPPPGSGRCFNCGIDGHWARDCK 118
RY+L+GRDVDGSRIIVEFA+G PRG GGS REY+GRGPPPG+GRCFNCGIDGHWARDCK
Sbjct: 61 RYNLDGRDVDGSRIIVEFAKGVPRGSGGSREREYVGRGPPPGTGRCFNCGIDGHWARDCK 120
Query: 119 AGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSP 155
AGDWKNKCYRCGERGHIERNCQNSP+ L R RSYSRSP
Sbjct: 121 AGDWKNKCYRCGERGHIERNCQNSPRSLRRERSYSRSP 158
>gi|226491636|ref|NP_001143694.1| uncharacterized protein LOC100276428 [Zea mays]
gi|195620112|gb|ACG31886.1| splicing factor, arginine/serine-rich 6 [Zea mays]
gi|448878170|gb|AGE46048.1| arginine/serine-rich splicing factor RS2Z39 transcript VI [Zea
mays]
Length = 353
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 124/147 (84%), Positives = 139/147 (94%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDRYGGTRLYV RLA+RTRSRDLE +F RYGRIR+V++KRD+AF+EFSD RDAD+A
Sbjct: 1 MPRYDDRYGGTRLYVSRLATRTRSRDLEHLFGRYGRIREVELKRDYAFIEFSDHRDADEA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
RY L+GRDVDGSRI+VEFA+G PRG GGSREY+GRGPPPG+GRCFNCG+DGHWARDCKAG
Sbjct: 61 RYQLDGRDVDGSRIVVEFAKGVPRGSGGSREYMGRGPPPGTGRCFNCGVDGHWARDCKAG 120
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKLR 147
DWKNKCYRCGERGHIERNCQNSP+ LR
Sbjct: 121 DWKNKCYRCGERGHIERNCQNSPRSLR 147
>gi|238014292|gb|ACR38181.1| unknown [Zea mays]
gi|413950154|gb|AFW82803.1| hypothetical protein ZEAMMB73_678679 [Zea mays]
gi|448878172|gb|AGE46049.1| arginine/serine-rich splicing factor RS2Z37A transcript I [Zea
mays]
Length = 325
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 207/333 (62%), Positives = 233/333 (69%), Gaps = 34/333 (10%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPR DDRYG TRLYVGRL+ RTRSRDLE +FS+YGRIR+V++KRD+AF+EFSDPRDADDA
Sbjct: 1 MPRNDDRYGNTRLYVGRLSPRTRSRDLEYLFSKYGRIREVELKRDYAFIEFSDPRDADDA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
+Y+L+GRDVDGSRIIVEFA+G PRG GGSR+Y GRGPPPG+GRCFNCG+DGHWARDC+AG
Sbjct: 61 QYNLDGRDVDGSRIIVEFAKGVPRGSGGSRDYNGRGPPPGTGRCFNCGVDGHWARDCQAG 120
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKLR-PRSYSRSPSPRRGRSRSRSYSRGRSDSRSRSP 179
DWKNKCYRCGERGHIERNCQNSP+ LR RSYSRSPSPRRGR RSRSYSR RS SRSRSP
Sbjct: 121 DWKNKCYRCGERGHIERNCQNSPRNLRRERSYSRSPSPRRGRGRSRSYSRSRSYSRSRSP 180
Query: 180 VKRDRSVERFERRTRSPRDSRSPK---RRRNSPPSSKGRKRSPTPDER-SPQDQRSPSPR 235
R R RS S S RR SP K R R+P SP+D+ SP P+
Sbjct: 181 SGSPRGGRRDRDERRSRSLSYSRSASPRRSVSPVKEKERSRTPDGSRSPSPRDKVSPPPK 240
Query: 236 DRRQANGSEYSGSPRGK-----SRSPVDDADGPEDRNYRSPPEENGRSRSRSLSPVPR-- 288
D NGS+ SP G+ SRSP D YRSP NGRS SRS SP
Sbjct: 241 DNGAHNGSDREDSPGGREMSKRSRSPSD--------GYRSP-VGNGRSPSRSPSPKVNNG 291
Query: 289 DDRSPI-------------DDDDNHGDPRGSES 308
DD SP DD++ G PRGS+S
Sbjct: 292 DDPSPKGNNGDDPSPKGNNGDDEHRGSPRGSQS 324
>gi|195624410|gb|ACG34035.1| splicing factor, arginine/serine-rich 6 [Zea mays]
gi|448878160|gb|AGE46043.1| arginine/serine-rich splicing factor RS2Z39 transcript I [Zea mays]
Length = 353
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 124/147 (84%), Positives = 139/147 (94%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDRYGGTRLYVGRLA+RTRSRDLE +F RYGRIR+V++KRD+AF+EFSD RDAD+A
Sbjct: 1 MPRYDDRYGGTRLYVGRLATRTRSRDLEHLFGRYGRIREVELKRDYAFIEFSDHRDADEA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
RY L+GRDVDGSRI+VE A+G PRG GGSREY+GRGPPPG+GRCFNCG+DGHWARDCKAG
Sbjct: 61 RYQLDGRDVDGSRIVVESAKGVPRGSGGSREYMGRGPPPGTGRCFNCGVDGHWARDCKAG 120
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKLR 147
DWKNKCYRCGERGHIERNCQNSP+ LR
Sbjct: 121 DWKNKCYRCGERGHIERNCQNSPRSLR 147
>gi|255644623|gb|ACU22814.1| unknown [Glycine max]
gi|255644635|gb|ACU22820.1| unknown [Glycine max]
gi|255644651|gb|ACU22828.1| unknown [Glycine max]
gi|255648053|gb|ACU24482.1| unknown [Glycine max]
Length = 167
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/150 (84%), Positives = 138/150 (92%), Gaps = 3/150 (2%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDD+YG TRLYVG L+SRTRSRDLE FSRYGR+R VDMK DFAFV+FSDPRDADDA
Sbjct: 1 MPRYDDKYGNTRLYVGHLSSRTRSRDLERAFSRYGRVRGVDMKNDFAFVDFSDPRDADDA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
RY+L+GRDVDGSRIIVEFA+G PR GSREYLGRGPPPGSGRCFNCG+DGHWARDCKAG
Sbjct: 61 RYNLDGRDVDGSRIIVEFAKGAPR---GSREYLGRGPPPGSGRCFNCGLDGHWARDCKAG 117
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKLRPRS 150
DWKNKCYRCGERGHIERNC+NSPKK+ ++
Sbjct: 118 DWKNKCYRCGERGHIERNCKNSPKKIEHKA 147
>gi|297820078|ref|XP_002877922.1| hypothetical protein ARALYDRAFT_323893 [Arabidopsis lyrata subsp.
lyrata]
gi|297323760|gb|EFH54181.1| hypothetical protein ARALYDRAFT_323893 [Arabidopsis lyrata subsp.
lyrata]
Length = 284
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 182/316 (57%), Positives = 205/316 (64%), Gaps = 41/316 (12%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDRYG TRLYVGRL+SRTR+RDLE +FSRYGR+RDVDMKRD+AFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRARDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
RY L+GRD DGSRI VE +RG PR GSR+ RGPPPGSGRCFNCG+DGHWARDC AG
Sbjct: 61 RYYLDGRDFDGSRITVEASRGAPR---GSRDNGSRGPPPGSGRCFNCGVDGHWARDCTAG 117
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKLRPR---SYSRSPSPRRGRSRSRSYSRGRSDSRSR 177
DWKNKCYRCGERGHIERNC+NSP + R SYSRSP +SRS R S SRS
Sbjct: 118 DWKNKCYRCGERGHIERNCKNSPSPKKARQGGSYSRSPV----KSRSPRRRRSPSRSRSY 173
Query: 178 SPVKRDRSVERFERRTRSPRD-SRSPKRRRNSPPSSKGRKRSPTPDERSPQDQRSPSPRD 236
S + RR +S D SRSPK S S KGR +S +PD++ D
Sbjct: 174 SRGRSYSRSRSPVRREKSVEDRSRSPKAMERS-LSPKGRDQSLSPDQKVT---------D 223
Query: 237 RRQANGSEYSGSPR--GKSRSPVDDADGPEDRNYRSPPEENGRSRSRSLSPVPRDDRSPI 294
GSEY GSP+ G R+ V P R SP NG+ DRSPI
Sbjct: 224 ASPKRGSEYDGSPKENGNGRNSV----SPIVRGDESPVGLNGQ------------DRSPI 267
Query: 295 DDDD--NHGDPRGSES 308
DD+ N P+GSES
Sbjct: 268 DDEAELNRPSPKGSES 283
>gi|326512990|dbj|BAK03402.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 282
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/156 (79%), Positives = 140/156 (89%), Gaps = 2/156 (1%)
Query: 7 RYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLN 65
+YGG T+LYVG L++ TR++D+E +F RYGRIR V++K D+ FVEFS+PRDADDARY L+
Sbjct: 34 QYGGNTKLYVGHLSTHTRTKDVEYLFGRYGRIRCVELKHDYGFVEFSNPRDADDARYELD 93
Query: 66 GRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNK 125
G+DVDGSRIIVEFARG PRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC AGDWKNK
Sbjct: 94 GQDVDGSRIIVEFARGTPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCNAGDWKNK 153
Query: 126 CYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRG 160
CYRCGE+GHIE+NCQNSPK L R RSYSRSP P RG
Sbjct: 154 CYRCGEKGHIEKNCQNSPKNLKRGRSYSRSPPPYRG 189
>gi|118487500|gb|ABK95577.1| unknown [Populus trichocarpa]
Length = 252
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 173/276 (62%), Positives = 194/276 (70%), Gaps = 37/276 (13%)
Query: 42 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 101
MKRD+AFVEFSDPRDADDAR+ L+G++ DGSRIIVEFA+G PRG SREYLGRGPPPGS
Sbjct: 1 MKRDYAFVEFSDPRDADDARHYLDGKEFDGSRIIVEFAKGVPRG---SREYLGRGPPPGS 57
Query: 102 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSP----S 156
GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC+NSPKKL R +SYSRSP S
Sbjct: 58 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCKNSPKKLTRGKSYSRSPGRSRS 117
Query: 157 PRRGRSRS-RSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGR 215
P RGRSRS P KR+RSVE E R+ SP P S+K R
Sbjct: 118 PHRGRSRSPSYSRGRSYSRSRSPPPKRERSVEN-ENRSLSP-----------EPKSTKAR 165
Query: 216 KRSPTPDERSPQDQRSPSPRDRRQANGS--EYSGSPRGKSRSPVDDADGPEDRNYRSPPE 273
KRSPTPDE SP+ PSP+ R+ + EYSGSP G+SRS + P D YRS P+
Sbjct: 166 KRSPTPDEGSPR----PSPKSRKLDDEQDREYSGSPTGRSRS---RSRSPRDERYRS-PQ 217
Query: 274 ENGRSRSRSLSPVPRDDRSPIDDD--DNHGDPRGSE 307
NGRSR P PRDDRSP+DDD DN+ PR S+
Sbjct: 218 TNGRSR----IPSPRDDRSPVDDDYEDNNRSPRDSD 249
>gi|222617767|gb|EEE53899.1| hypothetical protein OsJ_00434 [Oryza sativa Japonica Group]
Length = 377
Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 185/340 (54%), Positives = 211/340 (62%), Gaps = 72/340 (21%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRD 68
G TRLYVGRL+SRTR+RDLE++F RYGR+R VDMK +FAFVEFSD RDAD+ARY+L+GRD
Sbjct: 69 GNTRLYVGRLSSRTRTRDLEDLFGRYGRVRYVDMKHEFAFVEFSDARDADEARYNLDGRD 128
Query: 69 VDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYR 128
DGSR+IVEFA+G PRGPGGSREY+GRGPPPGSGRCFNCGIDGHWARDCKAGDWKN+CYR
Sbjct: 129 FDGSRMIVEFAKGVPRGPGGSREYMGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNRCYR 188
Query: 129 CGERGHIERNCQNSPKKL-RPRSY---------------------------------SRS 154
CG+RGHIER+C+NSPK L R RSY SR+
Sbjct: 189 CGDRGHIERDCRNSPKNLKRGRSYSRSPSPRRGRSRGRSYSRSRSRSYSRSQSPRRDSRN 248
Query: 155 PSPRRGRSRSRSYSRGRSDSRSRSPVKRD-RSVERFERRTRSP----RDSRSPKRRRNSP 209
R SRS DSRS RD RS + R T+SP RDSRSP RR SP
Sbjct: 249 ERRSRSPRDSRSPRGSPRDSRSPRGSPRDSRSPKGSPRDTQSPRGSPRDSRSP-RRSASP 307
Query: 210 PSSKGRKRSPTPDERSPQDQRSPSPRDRRQANGSEYSGSPRGKSRSPVDDADGPEDRNYR 269
P+ GR RSPTP+ RSP+PRD R R SRSP D E R+
Sbjct: 308 PN--GRNRSPTPNA-----SRSPAPRDSRSPM--------RADSRSPADH----ERRDMS 348
Query: 270 SPPEENGRSRSRSLSPVPRDDRSPIDDDDNH-GDPRGSES 308
+ NGR SP PRD +D+ NH PRGS S
Sbjct: 349 T--AANGR------SPSPRD----YEDNGNHRASPRGSAS 376
>gi|115434616|ref|NP_001042066.1| Os01g0155600 [Oryza sativa Japonica Group]
gi|54290784|dbj|BAD61423.1| putative splicing factor [Oryza sativa Japonica Group]
gi|113531597|dbj|BAF03980.1| Os01g0155600 [Oryza sativa Japonica Group]
gi|125524487|gb|EAY72601.1| hypothetical protein OsI_00466 [Oryza sativa Indica Group]
gi|215765664|dbj|BAG87361.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 324
Score = 259 bits (663), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 185/340 (54%), Positives = 211/340 (62%), Gaps = 72/340 (21%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRD 68
G TRLYVGRL+SRTR+RDLE++F RYGR+R VDMK +FAFVEFSD RDAD+ARY+L+GRD
Sbjct: 16 GNTRLYVGRLSSRTRTRDLEDLFGRYGRVRYVDMKHEFAFVEFSDARDADEARYNLDGRD 75
Query: 69 VDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYR 128
DGSR+IVEFA+G PRGPGGSREY+GRGPPPGSGRCFNCGIDGHWARDCKAGDWKN+CYR
Sbjct: 76 FDGSRMIVEFAKGVPRGPGGSREYMGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNRCYR 135
Query: 129 CGERGHIERNCQNSPKKL-RPRSY---------------------------------SRS 154
CG+RGHIER+C+NSPK L R RSY SR+
Sbjct: 136 CGDRGHIERDCRNSPKNLKRGRSYSRSPSPRRGRSRGRSYSRSRSRSYSRSQSPRRDSRN 195
Query: 155 PSPRRGRSRSRSYSRGRSDSRSRSPVKRD-RSVERFERRTRSP----RDSRSPKRRRNSP 209
R SRS DSRS RD RS + R T+SP RDSRSP RR SP
Sbjct: 196 ERRSRSPRDSRSPRGSPRDSRSPRGSPRDSRSPKGSPRDTQSPRGSPRDSRSP-RRSASP 254
Query: 210 PSSKGRKRSPTPDERSPQDQRSPSPRDRRQANGSEYSGSPRGKSRSPVDDADGPEDRNYR 269
P+ GR RSPTP+ RSP+PRD R R SRSP D E R+
Sbjct: 255 PN--GRNRSPTPNA-----SRSPAPRDSRSPM--------RADSRSPADH----ERRDMS 295
Query: 270 SPPEENGRSRSRSLSPVPRDDRSPIDDDDNH-GDPRGSES 308
+ NGR SP PRD +D+ NH PRGS S
Sbjct: 296 T--AANGR------SPSPRD----YEDNGNHRASPRGSAS 323
>gi|30693839|ref|NP_190918.3| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|75334513|sp|Q9FYB7.1|RSZ32_ARATH RecName: Full=Serine/arginine-rich splicing factor RS2Z32; AltName:
Full=RS-containing zinc finger protein 32;
Short=At-RS2Z32; Short=At-RSZ32
gi|9795142|emb|CAB67657.2| splicing factor-like protein [Arabidopsis thaliana]
gi|222422875|dbj|BAH19424.1| AT3G53500 [Arabidopsis thaliana]
gi|332645577|gb|AEE79098.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 284
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 180/316 (56%), Positives = 205/316 (64%), Gaps = 41/316 (12%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDRYG TRLYVGRL+SRTR+RDLE +FSRYGR+RDVDMKRD+AFVEFSDPRDADDA
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
RY L+GRD DGSRI VE +RG PR GSR+ RGPPPGSGRCFNCG+DGHWARDC AG
Sbjct: 61 RYYLDGRDFDGSRITVEASRGAPR---GSRDNGSRGPPPGSGRCFNCGVDGHWARDCTAG 117
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKLRPR---SYSRSPSPRRGRSRSRSYSRGRSDSRSR 177
DWKNKCYRCGERGHIERNC+NSP + R SYSRSP +SRS R S SRS
Sbjct: 118 DWKNKCYRCGERGHIERNCKNSPSPKKARQGGSYSRSPV----KSRSPRRRRSPSRSRSY 173
Query: 178 SPVKRDRSVERFERRTRSPRD-SRSPKRRRNSPPSSKGRKRSPTPDERSPQDQRSPSPRD 236
S + RR +S D SRSPK S S KGR +S +PD + D
Sbjct: 174 SRGRSYSRSRSPVRREKSVEDRSRSPKAMERS-VSPKGRDQSLSPDRKVI---------D 223
Query: 237 RRQANGSEYSGSPRGKSRSPVDDADGPEDRNYRSPPEENGRSRSRSLSPVPRD--DRSPI 294
GS+Y GSP+ ++ +G RN SP G SPV + DRSPI
Sbjct: 224 ASPKRGSDYDGSPK-------ENGNG---RNSASPIVGGGE------SPVGLNGQDRSPI 267
Query: 295 DDDDNHG--DPRGSES 308
DD+ P+GSES
Sbjct: 268 DDEAELSRPSPKGSES 283
>gi|30687109|ref|NP_850280.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
gi|75331124|sp|Q8VYA5.1|RSZ33_ARATH RecName: Full=Serine/arginine-rich splicing factor RS2Z33; AltName:
Full=RS-containing zinc finger protein 33;
Short=At-RS2Z33; Short=At-RSZ33
gi|18252179|gb|AAL61922.1| unknown protein [Arabidopsis thaliana]
gi|21386957|gb|AAM47882.1| unknown protein [Arabidopsis thaliana]
gi|51971244|dbj|BAD44314.1| unknown protein [Arabidopsis thaliana]
gi|330254293|gb|AEC09387.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
Length = 290
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 121/147 (82%), Positives = 134/147 (91%), Gaps = 3/147 (2%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDRYG TRLYVGRL+SRTR+RDLE +FSRYGR+RDVDMKRD+AFVEF DPRDADDA
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFGDPRDADDA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
R+ L+GRD DGSRI VEF+RG PR GSR++ RGPPPG+GRCFNCG+DGHWARDC AG
Sbjct: 61 RHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGAGRCFNCGVDGHWARDCTAG 117
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKLR 147
DWKNKCYRCGERGHIERNC+NSPKKLR
Sbjct: 118 DWKNKCYRCGERGHIERNCKNSPKKLR 144
>gi|9843663|emb|CAC03605.1| splicing factor RSZ33 [Arabidopsis thaliana]
Length = 290
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 120/147 (81%), Positives = 133/147 (90%), Gaps = 3/147 (2%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDRYG TRLYVGRL+SRTR+RDLE +FSRYGR+RDVDMKRD+AFVEF DPRDADDA
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFGDPRDADDA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
R+ L+GRD DGSRI VEF+RG PR GSR++ RGPPPG+GRCFNCG+DGHWARDC AG
Sbjct: 61 RHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGAGRCFNCGVDGHWARDCTAG 117
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKLR 147
DWKNKCYRCGERGHIERNC+N PKKLR
Sbjct: 118 DWKNKCYRCGERGHIERNCKNQPKKLR 144
>gi|51971529|dbj|BAD44429.1| unknown protein [Arabidopsis thaliana]
Length = 290
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/147 (81%), Positives = 133/147 (90%), Gaps = 3/147 (2%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDRYG TRLYVGRL+SRTR+RDLE +FSRYGR+RDVDMKRD+AFV F DPRDADDA
Sbjct: 1 MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVVFGDPRDADDA 60
Query: 61 RYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
R+ L+GRD DGSRI VEF+RG PR GSR++ RGPPPG+GRCFNCG+DGHWARDC AG
Sbjct: 61 RHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGAGRCFNCGVDGHWARDCTAG 117
Query: 121 DWKNKCYRCGERGHIERNCQNSPKKLR 147
DWKNKCYRCGERGHIERNC+NSPKKLR
Sbjct: 118 DWKNKCYRCGERGHIERNCKNSPKKLR 144
>gi|116788860|gb|ABK25029.1| unknown [Picea sitchensis]
Length = 316
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 118/146 (80%), Positives = 130/146 (89%), Gaps = 2/146 (1%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDR G TRLYVGRL+SRTR+RDLE++F+RYGR+RDVD+K DFAF+EFSDPRDAD+A
Sbjct: 1 MPRYDDRSGNTRLYVGRLSSRTRTRDLEDLFNRYGRVRDVDLKHDFAFIEFSDPRDADEA 60
Query: 61 RYSLNGRDVDGSRIIVEF--ARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCK 118
RY LNGRD+DGSRI+VEF G +REYLGRGPPPGSGRCFNCG DGHWARDCK
Sbjct: 61 RYYLNGRDLDGSRIVVEFARGGPRGAAGGRTREYLGRGPPPGSGRCFNCGNDGHWARDCK 120
Query: 119 AGDWKNKCYRCGERGHIERNCQNSPK 144
AGDWKNKCYRCGERGHIERNCQNSPK
Sbjct: 121 AGDWKNKCYRCGERGHIERNCQNSPK 146
>gi|116791032|gb|ABK25831.1| unknown [Picea sitchensis]
gi|224284468|gb|ACN39968.1| unknown [Picea sitchensis]
Length = 316
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 118/146 (80%), Positives = 130/146 (89%), Gaps = 2/146 (1%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDR G TRLYVGRL+SRTR+RDLE++F+RYGR+RDVD+K DFAF+EFSDPRDAD+A
Sbjct: 1 MPRYDDRSGNTRLYVGRLSSRTRTRDLEDLFNRYGRVRDVDLKHDFAFIEFSDPRDADEA 60
Query: 61 RYSLNGRDVDGSRIIVEF--ARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCK 118
RY LNGRD+DGSRI+VEF G +REYLGRGPPPGSGRCFNCG DGHWARDCK
Sbjct: 61 RYYLNGRDLDGSRIVVEFARGGPRGAAGGRTREYLGRGPPPGSGRCFNCGNDGHWARDCK 120
Query: 119 AGDWKNKCYRCGERGHIERNCQNSPK 144
AGDWKNKCYRCGERGHIERNCQNSPK
Sbjct: 121 AGDWKNKCYRCGERGHIERNCQNSPK 146
>gi|357129728|ref|XP_003566513.1| PREDICTED: uncharacterized protein LOC100839501 [Brachypodium
distachyon]
Length = 292
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 162/269 (60%), Positives = 190/269 (70%), Gaps = 22/269 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
T+LYVGRL++RTR++D+E +F RYGR+R+V++K D+ FVEFSDPRDADDARY L+GRD D
Sbjct: 39 TKLYVGRLSTRTRTQDVEYLFGRYGRVRNVELKHDYGFVEFSDPRDADDARYELDGRDFD 98
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCG 130
GSRIIVEFA+G PRGPGGS Y+GR PPGSGRCFNCGI+GHWARDCKAG+WKNKCYRCG
Sbjct: 99 GSRIIVEFAKGTPRGPGGSFNYVGRSLPPGSGRCFNCGIEGHWARDCKAGNWKNKCYRCG 158
Query: 131 ERGHIERNCQNSPKKL-RPRSYSRSPSPRRGRSRSRSYSRGRSDSRSRSPVKRDRSVERF 189
E GHIE+NCQNSPK L R YSRSPSP+RGRSRSRSYSRG R DR
Sbjct: 159 EMGHIEKNCQNSPKNLKRGGRYSRSPSPQRGRSRSRSYSRGHKGYRD------DRGAGLK 212
Query: 190 ERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTPDERSPQDQRSPSPRDRRQANGSEYSGSP 249
ERR S S SP RR++ PS G RSPT + S PR + + NGS +S
Sbjct: 213 ERRPIS--SSYSP--RRSASPS--GCNRSPT------SNGMSHPPRKQAEGNGSHHSA-- 258
Query: 250 RGKSRSPVDDADGPEDRNYRSPPEENGRS 278
RG S+SP D P PE +G+S
Sbjct: 259 RGDSQSPAHDRR-PATNGRGLAPEHDGKS 286
>gi|149390510|gb|ABR25316.1| splicing factor [Oryza sativa Indica Group]
Length = 209
Score = 249 bits (637), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 118/144 (81%), Positives = 134/144 (93%), Gaps = 1/144 (0%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRD 68
G TRLYVGRL+SRTR+RDLE++F RYGR+R VDMK +FAFVEFSD RDAD+ARY+L+GRD
Sbjct: 16 GNTRLYVGRLSSRTRTRDLEDLFGRYGRVRYVDMKHEFAFVEFSDARDADEARYNLDGRD 75
Query: 69 VDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYR 128
DGSR+IVEFA+G PRGPGGSREY+GRGPPPGSGRCFNCGIDGHWARDCKAGDWKN+CYR
Sbjct: 76 FDGSRMIVEFAKGVPRGPGGSREYMGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNRCYR 135
Query: 129 CGERGHIERNCQNSPKKL-RPRSY 151
CG+RGHIER+C+NSPK L R RSY
Sbjct: 136 CGDRGHIERDCRNSPKNLKRGRSY 159
>gi|27476067|gb|AAO16998.1| Unknown protein [Oryza sativa Japonica Group]
Length = 389
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 169/351 (48%), Positives = 191/351 (54%), Gaps = 85/351 (24%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYG------------------------- 35
MPRYDD YG TRLYVGRL+SRTRSRDLE +F RYG
Sbjct: 46 MPRYDDHYGSTRLYVGRLSSRTRSRDLEYLFGRYGRSCVFDLNDLVEGFSVFYTTREWKL 105
Query: 36 ---------------------RIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGSRI 74
RIR+V++KRD+AF+EFSDPRDAD+ARY+L+GRDVDGSRI
Sbjct: 106 QVGDAFEYLSHDGLLFGNHWCRIREVELKRDYAFIEFSDPRDADEARYNLDGRDVDGSRI 165
Query: 75 IVEFARGGPRG-PGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERG 133
+VEFA+G PRG GGSREY+GRGPPPG+GRCFNCGIDGHWARDCKAGDWKNKCYRCGERG
Sbjct: 166 LVEFAKGVPRGAAGGSREYMGRGPPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERG 225
Query: 134 HIERNCQNSPKKLRPRSYSRSPSPRRGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRT 193
HIERNCQNSP+ L RGR + ER
Sbjct: 226 HIERNCQNSPRNLSRSRSRSLSGSPRGRRDRDDRRSRSLSYSRSPRRSISPAANGKERNP 285
Query: 194 RSPRDSRSPKRRRNSPPSSKGRKRSPTPDERSPQDQRSPSPRDRRQANGSEYSGSPRGKS 253
SP RSP RSP QD+ SP P+D + NG G R S
Sbjct: 286 -SPNGRRSP--------------RSP-------QDRVSPPPKDNDERNGDSPWG--RENS 321
Query: 254 RSPVDDADGPEDRNYRSPPEENGRSRSRSLSPVPRDDRSPIDDDDNHGDPR 304
RSP D YRSP NGR SP PR++ SP D+N PR
Sbjct: 322 RSPSD--------GYRSPVAANGR------SPSPRNNGSPSPMDNNSRSPR 358
>gi|413944557|gb|AFW77206.1| hypothetical protein ZEAMMB73_752942 [Zea mays]
Length = 330
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 142/275 (51%), Positives = 173/275 (62%), Gaps = 34/275 (12%)
Query: 1 MPRYDDRY-------------GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFA 47
M RY+DRY T+LYVG+++ TR++DLE+IF +YGR+R+VDMKR+F
Sbjct: 67 MSRYNDRYDHNNRYDRHGRHGSNTKLYVGQISPYTRTQDLEDIFRKYGRLRNVDMKREFG 126
Query: 48 FVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNC 107
FVEF+DPRDADDAR+ L+GR DGS +IVEFARG RGPGG G+GP GRC+NC
Sbjct: 127 FVEFTDPRDADDARHDLDGRIFDGSHLIVEFARGAQRGPGGV-PLDGKGPSF-PGRCYNC 184
Query: 108 GIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRGRSRSRS 166
G+DGHW RDCKAGDW++KC+RCGE GHIERNC+NS K L R RSY RS SP G+ R RS
Sbjct: 185 GMDGHWVRDCKAGDWRDKCFRCGELGHIERNCKNSSKDLKRGRSYLRSASPHHGKGRGRS 244
Query: 167 YS--------RGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRS 218
YS RGR S SRSP + RR RS SRS R NS + +
Sbjct: 245 YSRSLSPYLGRGRGRSYSRSP-------SHYHRRGRSWSYSRSHSPRNNSKAYGEELPST 297
Query: 219 PTPDERSPQDQRSPSPRDRRQAN-GSEYSGSPRGK 252
+ R P +RS P +R + N GS G RGK
Sbjct: 298 RSGYSRGP--RRSSPPMERAECNGGSPMRGEARGK 330
>gi|293337151|ref|NP_001168362.1| uncharacterized protein LOC100382130 [Zea mays]
gi|223945609|gb|ACN26888.1| unknown [Zea mays]
gi|223947765|gb|ACN27966.1| unknown [Zea mays]
gi|413950152|gb|AFW82801.1| hypothetical protein ZEAMMB73_678679 [Zea mays]
Length = 315
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 182/310 (58%), Positives = 207/310 (66%), Gaps = 34/310 (10%)
Query: 24 SRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGP 83
SR L + + RIR+V++KRD+AF+EFSDPRDADDA+Y+L+GRDVDGSRIIVEFA+G P
Sbjct: 14 SRQLIVCGNHFRRIREVELKRDYAFIEFSDPRDADDAQYNLDGRDVDGSRIIVEFAKGVP 73
Query: 84 RGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP 143
RG GGSR+Y GRGPPPG+GRCFNCG+DGHWARDC+AGDWKNKCYRCGERGHIERNCQNSP
Sbjct: 74 RGSGGSRDYNGRGPPPGTGRCFNCGVDGHWARDCQAGDWKNKCYRCGERGHIERNCQNSP 133
Query: 144 KKLR-PRSYSRSPSPRRGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSP 202
+ LR RSYSRSPSPRRGR RSRSYSR RS SRSRSP R R RS S S
Sbjct: 134 RNLRRERSYSRSPSPRRGRGRSRSYSRSRSYSRSRSPSGSPRGGRRDRDERRSRSLSYSR 193
Query: 203 K---RRRNSPPSSKGRKRSPTPDER-SPQDQRSPSPRDRRQANGSEYSGSPRGK-----S 253
RR SP K R R+P SP+D+ SP P+D NGS+ SP G+ S
Sbjct: 194 SASPRRSVSPVKEKERSRTPDGSRSPSPRDKVSPPPKDNGAHNGSDREDSPGGREMSKRS 253
Query: 254 RSPVDDADGPEDRNYRSPPEENGRSRSRSLSPVPR--DDRSPI-------------DDDD 298
RSP D YRSP NGRS SRS SP DD SP DD+
Sbjct: 254 RSPSD--------GYRSP-VGNGRSPSRSPSPKVNNGDDPSPKGNNGDDPSPKGNNGDDE 304
Query: 299 NHGDPRGSES 308
+ G PRGS+S
Sbjct: 305 HRGSPRGSQS 314
>gi|448878405|gb|AGE46165.1| arginine/serine-rich splicing factor RS2Z37 transcript I
[Physcomitrella patens subsp. patens]
Length = 331
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 154/310 (49%), Positives = 197/310 (63%), Gaps = 41/310 (13%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRD 68
G TRLYVGRL++RTRSRDLE++F++YGR+RDVD+K DFAFVEF+D RDADDAR+ +NG+D
Sbjct: 41 GATRLYVGRLSTRTRSRDLEDLFAKYGRVRDVDVKHDFAFVEFADARDADDARHYVNGKD 100
Query: 69 VDGSRIIVEFARGGPRGP-GGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCY 127
DG+R+IVEFAR GPRG GG+REYLGRGPPPG+GRC+NCG DGHWARDCKAGDW++KCY
Sbjct: 101 FDGNRLIVEFARRGPRGASGGAREYLGRGPPPGTGRCYNCGNDGHWARDCKAGDWRDKCY 160
Query: 128 RCGERGHIERNCQNSPKKL--------------RPRSYSRSPSPRRGRSRSRSYSRGRSD 173
RCG+RGHIERNC+NSP+ + S R RGRS
Sbjct: 161 RCGQRGHIERNCRNSPRPTSSPSRSRSRSPRGHKRSSRRSVSRSRSRSFSRSPPRRGRSP 220
Query: 174 SRS-RSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTP------DERSP 226
+++ RSP+K DRS + +RR + RS R P + R SP+P RSP
Sbjct: 221 AKADRSPMKDDRSPAKGDRR----KSDRSKSRSLTPLPKDEKRSLSPSPVPNGRSISRSP 276
Query: 227 QDQRSPSPRDRRQANGSEYSGSPRGKSRSPVDDADGPEDRNYRSPPEENGRSRSRSLSPV 286
RSPSP +A+ E S PR K RS + +D + SP ++ LSP+
Sbjct: 277 -GARSPSP----EAHRGEQSPPPREKRRSISPSPE--QDLDKGSP--------AKDLSPL 321
Query: 287 PRDDRSPIDD 296
PR +P ++
Sbjct: 322 PRRSLTPEEE 331
>gi|242089645|ref|XP_002440655.1| hypothetical protein SORBIDRAFT_09g004685 [Sorghum bicolor]
gi|241945940|gb|EES19085.1| hypothetical protein SORBIDRAFT_09g004685 [Sorghum bicolor]
Length = 241
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/177 (64%), Positives = 137/177 (77%), Gaps = 12/177 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
+LYVG+++ TR++D E++FS+YGR+R+VD+KRDF FVEFSDPRDADDAR+ L+GR DG
Sbjct: 1 KLYVGQISPHTRTQDHEDLFSKYGRLRNVDLKRDFGFVEFSDPRDADDARHDLDGRRFDG 60
Query: 72 SRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGE 131
S IIVEFARG RGPGG + RGPP GRC+NCG+DG W RDCKA DW+++C+RCGE
Sbjct: 61 SYIIVEFARGARRGPGGVPLDV-RGPPF-PGRCYNCGMDG-WVRDCKADDWRDRCFRCGE 117
Query: 132 RGHIERNCQNSPKKL-RPRSYSRSPSPRRGRSRSRSYS--------RGRSDSRSRSP 179
GHIERNC+NSPK L R RSYSRSPSP G+ R RSYS RGR S SRSP
Sbjct: 118 LGHIERNCKNSPKDLKRGRSYSRSPSPHHGKGRGRSYSKSLSPHHGRGRGRSYSRSP 174
>gi|413942177|gb|AFW74826.1| hypothetical protein ZEAMMB73_867689 [Zea mays]
Length = 285
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 149/257 (57%), Positives = 169/257 (65%), Gaps = 19/257 (7%)
Query: 49 VEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCG 108
+ + RDAD+ARY L+GRDVDGSRI+VEFA+G PRGPGGSREY+GRGPPPG+GRCFNCG
Sbjct: 1 MHLFEHRDADEARYQLDGRDVDGSRIVVEFAKGVPRGPGGSREYMGRGPPPGTGRCFNCG 60
Query: 109 IDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSYSRSPSPRRGRSRSRSY 167
+DGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+ + R RSYSRSPSPRRGR RS SY
Sbjct: 61 MDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRSVRRERSYSRSPSPRRGRGRSPSY 120
Query: 168 SRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPS----SKGRKRSPTPD- 222
SR RS SRSRS + R D RS + P +K ++RSPTP
Sbjct: 121 SRSRSRSRSRSYSRSRSLSGSPRGGRRDRDDRRSRSLSYSRSPMRSPPAKEKERSPTPGG 180
Query: 223 -----ERSPQDQ-RSPSPRDRRQANGSEYSGSPRGKSRSPVDDADGPEDRNYRSPPEENG 276
RSPQDQ SP P+D NGS+ SPRG+ S RS P NG
Sbjct: 181 SRSPRSRSPQDQVMSPPPKDNGDRNGSDRGDSPRGRENSRSRSRSRSPSGGNRS-PAANG 239
Query: 277 RSRSRSLSPVPRDDRSP 293
R SP PR DR+P
Sbjct: 240 R------SPSPRGDRTP 250
>gi|297741517|emb|CBI32649.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 130/158 (82%), Positives = 136/158 (86%), Gaps = 4/158 (2%)
Query: 42 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSR-EYLGRGPPPG 100
MK DFAFVEFSDPRDADDARY+LNGRD DGSRIIVEFA+GGPRG G EYLGRGPPPG
Sbjct: 1 MKHDFAFVEFSDPRDADDARYNLNGRDFDGSRIIVEFAKGGPRGGSGGSREYLGRGPPPG 60
Query: 101 SGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL--RPRSYSRSP-SP 157
SGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+KL RSYSRSP
Sbjct: 61 SGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRKLSRHGRSYSRSPVRS 120
Query: 158 RRGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRS 195
R GRSRSRSYS RS SRSRSP KRDRS+ER +R+ S
Sbjct: 121 RHGRSRSRSYSPSRSYSRSRSPPKRDRSIERDKRQQAS 158
>gi|115462263|ref|NP_001054731.1| Os05g0162600 [Oryza sativa Japonica Group]
gi|46981336|gb|AAT07654.1| unknown protein [Oryza sativa Japonica Group]
gi|113578282|dbj|BAF16645.1| Os05g0162600 [Oryza sativa Japonica Group]
gi|215693366|dbj|BAG88748.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768462|dbj|BAH00691.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630300|gb|EEE62432.1| hypothetical protein OsJ_17224 [Oryza sativa Japonica Group]
Length = 338
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/273 (47%), Positives = 157/273 (57%), Gaps = 33/273 (12%)
Query: 3 RYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARY 62
RY+ R +RLYVG ++ RTR+ DLE +FSRYGR+R VD+K ++ FVEFSDPRDA+DAR
Sbjct: 10 RYEPRGRNSRLYVGHISLRTRAEDLENLFSRYGRVRFVDLKNEYGFVEFSDPRDANDARL 69
Query: 63 SLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDW 122
L+GR DGS IIV+FARG RG GGSR Y R P GS CFNCG++GHW R+C AGDW
Sbjct: 70 DLDGRKYDGSDIIVQFARGVERGLGGSRGYKAR-PAHGSDHCFNCGMEGHWHRNCTAGDW 128
Query: 123 KNKCYRCGERGHIERNCQNSPKKLRPR---------------SYSRSPSPRRGRSR---- 163
N+CY CGERGHI R C+NSPK L+ SY +S P S
Sbjct: 129 TNRCYGCGERGHILRECKNSPKDLKQERGYSRSRSPRRRRSPSYGKSGPPSHWGSHGADR 188
Query: 164 -SRSYSRGRSDSRSRSPVKRDR-SVERFE--RRTRSPRDSRSPKRRRNSPPSSKGRKRSP 219
R +SR SRSP + D S +R RR P + R RR + P S GR RSP
Sbjct: 189 EERLHSRRDGRGYSRSPRRHDSPSNQRNHSPRRYALPSNERYDGTRRYASP-SYGRDRSP 247
Query: 220 TPD--------ERSPQDQRSPSPRDRRQANGSE 244
+ D +PSPR+R NGS
Sbjct: 248 GGNALPANGRSHNLTSDGMNPSPRERDDQNGSH 280
>gi|125550950|gb|EAY96659.1| hypothetical protein OsI_18573 [Oryza sativa Indica Group]
Length = 338
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 128/273 (46%), Positives = 156/273 (57%), Gaps = 33/273 (12%)
Query: 3 RYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARY 62
RY+ R +RLYVG ++ TR+ DLE +FSRYGR+R VD+K ++ FVEFSDPRDA+DAR
Sbjct: 10 RYEPRGRNSRLYVGHISLCTRAEDLENLFSRYGRVRFVDLKNEYGFVEFSDPRDANDARL 69
Query: 63 SLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDW 122
L+GR DGS IIV+FARG RG GGSR Y R P GS CFNCG++GHW R+C AGDW
Sbjct: 70 DLDGRKYDGSDIIVQFARGVERGLGGSRGYKAR-PAHGSDHCFNCGMEGHWHRNCTAGDW 128
Query: 123 KNKCYRCGERGHIERNCQNSPKKLRPR---------------SYSRSPSPRRGRSR---- 163
N+CY CGERGHI R C+NSPK L+ SY +S P S
Sbjct: 129 TNRCYGCGERGHILRECKNSPKDLKQERGYSRSRSPRRRRSPSYGKSGPPSHWGSHGADR 188
Query: 164 -SRSYSRGRSDSRSRSPVKRDR-SVERFE--RRTRSPRDSRSPKRRRNSPPSSKGRKRSP 219
R +SR SRSP + D S +R RR P + R RR + P S GR RSP
Sbjct: 189 EERLHSRRDGRGYSRSPRRHDSPSNQRNHSPRRYALPSNERYDGTRRYASP-SYGRDRSP 247
Query: 220 TPD--------ERSPQDQRSPSPRDRRQANGSE 244
+ D +PSPR+R NGS
Sbjct: 248 GGNALPANGRSHNLTSDGMNPSPRERDDQNGSH 280
>gi|30693836|ref|NP_851015.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|20465265|gb|AAM19952.1| AT3g53500/F4P12_200 [Arabidopsis thaliana]
gi|24111329|gb|AAN46788.1| At3g53500/F4P12_200 [Arabidopsis thaliana]
gi|332645576|gb|AEE79097.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 243
Score = 186 bits (473), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 145/275 (52%), Positives = 166/275 (60%), Gaps = 41/275 (14%)
Query: 42 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 101
MKRD+AFVEFSDPRDADDARY L+GRD DGSRI VE +RG PRG SR+ RGPPPGS
Sbjct: 1 MKRDYAFVEFSDPRDADDARYYLDGRDFDGSRITVEASRGAPRG---SRDNGSRGPPPGS 57
Query: 102 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPR---SYSRSPSPR 158
GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIERNC+NSP + R SYSRSP
Sbjct: 58 GRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPSPKKARQGGSYSRSPV-- 115
Query: 159 RGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRD-SRSPKRRRNSPPSSKGRKR 217
+SRS R S SRS S + RR +S D SRSPK S S KGR +
Sbjct: 116 --KSRSPRRRRSPSRSRSYSRGRSYSRSRSPVRREKSVEDRSRSPKAMERS-VSPKGRDQ 172
Query: 218 SPTPDERSPQDQRSPSPRDRRQANGSEYSGSPRGKSRSPVDDADGPEDRNYRSPPEENGR 277
S +PD + D GS+Y GSP+ ++ +G RN SP G
Sbjct: 173 SLSPDRKV---------IDASPKRGSDYDGSPK-------ENGNG---RNSASPIVGGGE 213
Query: 278 SRSRSLSPVPRD--DRSPIDDDDNHG--DPRGSES 308
SPV + DRSPIDD+ P+GSES
Sbjct: 214 ------SPVGLNGQDRSPIDDEAELSRPSPKGSES 242
>gi|42571093|ref|NP_973620.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
gi|4056488|gb|AAC98054.1| unknown protein [Arabidopsis thaliana]
gi|330254292|gb|AEC09386.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
Length = 249
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/106 (81%), Positives = 95/106 (89%), Gaps = 3/106 (2%)
Query: 42 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 101
MKRD+AFVEF DPRDADDAR+ L+GRD DGSRI VEF+RG PRG SR++ RGPPPG+
Sbjct: 1 MKRDYAFVEFGDPRDADDARHYLDGRDFDGSRITVEFSRGAPRG---SRDFDSRGPPPGA 57
Query: 102 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLR 147
GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIERNC+NSPKKLR
Sbjct: 58 GRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLR 103
>gi|42571091|ref|NP_973619.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
gi|330254291|gb|AEC09385.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
Length = 260
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 80/106 (75%), Positives = 89/106 (83%), Gaps = 3/106 (2%)
Query: 42 MKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 101
+ F EF DPRDADDAR+ L+GRD DGSRI VEF+RG PRG SR++ RGPPPG+
Sbjct: 12 LSSHFRNQEFGDPRDADDARHYLDGRDFDGSRITVEFSRGAPRG---SRDFDSRGPPPGA 68
Query: 102 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLR 147
GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIERNC+NSPKKLR
Sbjct: 69 GRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLR 114
>gi|302788554|ref|XP_002976046.1| hypothetical protein SELMODRAFT_415978 [Selaginella moellendorffii]
gi|300156322|gb|EFJ22951.1| hypothetical protein SELMODRAFT_415978 [Selaginella moellendorffii]
Length = 386
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 96/163 (58%), Positives = 114/163 (69%), Gaps = 29/163 (17%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGR----------IRDVDMKRDFAFV- 49
MPRYDD G TRLYVGRL++RTRSRDLE IFS+YGR + D R++ +
Sbjct: 1 MPRYDD--GQTRLYVGRLSTRTRSRDLEAIFSKYGRFLVGFLVPSLVEARDDVREWLLML 58
Query: 50 ------EFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGG---------SREYLG 94
EFSDPRDAD+AR+ LNGRD +G R+IVEFAR GPR G RE L
Sbjct: 59 VGRGKKEFSDPRDADEARHYLNGRDFEGHRMIVEFARRGPRSGSGGSGGGSIRREREPL- 117
Query: 95 RGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIER 137
RGPPPG+GRC+NCG DGHWARDC+AGDWK+KCYRCG+RG ++R
Sbjct: 118 RGPPPGTGRCYNCGNDGHWARDCRAGDWKDKCYRCGQRGTLDR 160
>gi|302769814|ref|XP_002968326.1| hypothetical protein SELMODRAFT_409589 [Selaginella moellendorffii]
gi|300163970|gb|EFJ30580.1| hypothetical protein SELMODRAFT_409589 [Selaginella moellendorffii]
Length = 386
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/163 (58%), Positives = 114/163 (69%), Gaps = 29/163 (17%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGR----------IRDVDMKRDFAFV- 49
MPRYDD G TRLYVGRL++RTRSRDLE IFS+YGR + D R++ +
Sbjct: 1 MPRYDD--GQTRLYVGRLSTRTRSRDLEAIFSKYGRFLVGFLVPSLVEARDDVREWLLML 58
Query: 50 ------EFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGG---------SREYLG 94
EFSDPRDAD+AR+ LNGRD +G R+IVEFAR GPR G RE L
Sbjct: 59 VGRGKKEFSDPRDADEARHYLNGRDFEGHRMIVEFARRGPRSGSGGSGGGSIRREREPL- 117
Query: 95 RGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIER 137
RGPPPG+GRC+NCG DGHWARDC+AGDWK+KCYRCG+RG ++R
Sbjct: 118 RGPPPGTGRCYNCGNDGHWARDCRAGDWKDKCYRCGQRGTLDR 160
>gi|448878310|gb|AGE46118.1| arginine/serine-rich splicing factor RS2Z34 transcript V [Sorghum
bicolor]
Length = 227
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 129/179 (72%), Gaps = 22/179 (12%)
Query: 89 SREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-R 147
SREY+G+GPPPGSGRCFNCG+DGHWARDCKAGDWKN+CYRCG+RGHIER+CQNSPK L R
Sbjct: 33 SREYMGKGPPPGSGRCFNCGMDGHWARDCKAGDWKNRCYRCGDRGHIERDCQNSPKNLRR 92
Query: 148 PRSYSRSPSPRRGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRR-- 205
RSYSRSPSPRR RS RSYSR RS SRS R S R RSPRDSRSP+R
Sbjct: 93 GRSYSRSPSPRRERSPVRSYSRSRSRGYSRSRSPRQNS-----RDERSPRDSRSPRRSPR 147
Query: 206 -----RNSPPSSKGRKRSPTPDERSPQDQRSPSPRDRRQANGSEYSGSP-RGKSRSPVD 258
R SP SKGR RSP SP RSP+PR+R NGS+YS SP R SRSP D
Sbjct: 148 DSRSPRRSPSLSKGRDRSP-----SPNGSRSPAPRER---NGSDYSMSPRRDDSRSPAD 198
>gi|215737382|dbj|BAG96311.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765749|dbj|BAG87446.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 231
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 136/223 (60%), Gaps = 26/223 (11%)
Query: 93 LGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSY 151
+GRGPPPG+GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+ L R RSY
Sbjct: 1 MGRGPPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRNLRRERSY 60
Query: 152 S----RSPSPRRGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRN 207
S R RS SRS SR RS SRSRS R E RR
Sbjct: 61 SCSPSPRRGRGRSRSYSRSRSRSRSYSRSRSRSLSGSPRARRELERSRSLSYSRSPRRSI 120
Query: 208 SPPSSKGRKRSPTPD----ERSPQDQRSPSPRDRRQANGSEYSGSPRGK--SRSPVDDAD 261
SP +++ +KRSPTPD RSPQDQ SP P+D + NGS++ SPRG+ SRSP D
Sbjct: 121 SPAANE-KKRSPTPDGSRSPRSPQDQVSPPPKDNAERNGSDHGDSPRGRENSRSPSD--- 176
Query: 262 GPEDRNYRSPPEENGRSRSRSLSPVPRDDRSPIDDDDNHGDPR 304
YRSP NGR SP PR++ SP D+ PR
Sbjct: 177 -----GYRSPAAANGR------SPSPRNNGSPSPMDNGSRSPR 208
>gi|413944556|gb|AFW77205.1| hypothetical protein ZEAMMB73_752942 [Zea mays]
Length = 282
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/129 (56%), Positives = 93/129 (72%), Gaps = 15/129 (11%)
Query: 1 MPRYDDRY-------------GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFA 47
M RY+DRY T+LYVG+++ TR++DLE+IF +YGR+R+VDMKR+F
Sbjct: 67 MSRYNDRYDHNNRYDRHGRHGSNTKLYVGQISPYTRTQDLEDIFRKYGRLRNVDMKREFG 126
Query: 48 FVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNC 107
FVEF+DPRDADDAR+ L+GR DGS +IVEFARG RGPGG G+GP GRC+NC
Sbjct: 127 FVEFTDPRDADDARHDLDGRIFDGSHLIVEFARGAQRGPGGV-PLDGKGPSF-PGRCYNC 184
Query: 108 GIDGHWARD 116
G+DGHWA +
Sbjct: 185 GMDGHWAWE 193
>gi|452822290|gb|EME29311.1| splicing factor, arginine/serine-rich 7 [Galdieria sulphuraria]
Length = 258
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 87/128 (67%), Gaps = 13/128 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
+LYVG ++ RDLE++FS+YGR+RDV + D+AFVE D RDA+DARY L+G+ ++G
Sbjct: 5 KLYVGNVSRHATRRDLEDLFSKYGRVRDVRLLSDYAFVEMGDERDAEDARYYLDGKRLEG 64
Query: 72 SRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGE 131
RI VEFA+ PP +C+NCG+ GH+AR+C GDW N+CYRCGE
Sbjct: 65 ERIRVEFAK-------------NERAPPRQPKCYNCGLLGHFARECPNGDWSNRCYRCGE 111
Query: 132 RGHIERNC 139
+GH +++C
Sbjct: 112 KGHTQKDC 119
>gi|226494071|ref|NP_001140880.1| uncharacterized protein LOC100272956 [Zea mays]
gi|194701560|gb|ACF84864.1| unknown [Zea mays]
gi|413942178|gb|AFW74827.1| hypothetical protein ZEAMMB73_867689 [Zea mays]
gi|413942179|gb|AFW74828.1| hypothetical protein ZEAMMB73_867689 [Zea mays]
Length = 241
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 131/213 (61%), Gaps = 19/213 (8%)
Query: 93 LGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSY 151
+GRGPPPG+GRCFNCG+DGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+ + R RSY
Sbjct: 1 MGRGPPPGTGRCFNCGMDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRSVRRERSY 60
Query: 152 SRSPSPRRGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPS 211
SRSPSPRRGR RS SYSR RS SRSRS + R D RS + P
Sbjct: 61 SRSPSPRRGRGRSPSYSRSRSRSRSRSYSRSRSLSGSPRGGRRDRDDRRSRSLSYSRSPM 120
Query: 212 ----SKGRKRSPTPD------ERSPQDQ-RSPSPRDRRQANGSEYSGSPRGKSRSPVDDA 260
+K ++RSPTP RSPQDQ SP P+D NGS+ SPRG+ S
Sbjct: 121 RSPPAKEKERSPTPGGSRSPRSRSPQDQVMSPPPKDNGDRNGSDRGDSPRGRENSRSRSR 180
Query: 261 DGPEDRNYRSPPEENGRSRSRSLSPVPRDDRSP 293
RS P NGR SP PR DR+P
Sbjct: 181 SRSPSGGNRS-PAANGR------SPSPRGDRTP 206
>gi|238005718|gb|ACR33894.1| unknown [Zea mays]
gi|413942171|gb|AFW74820.1| hypothetical protein ZEAMMB73_961242 [Zea mays]
Length = 222
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 130/234 (55%), Positives = 146/234 (62%), Gaps = 33/234 (14%)
Query: 93 LGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKL-RPRSY 151
+GRGPPPG+GRCFNCG+DGHWARDCKAGDWKNKCYRCGE GHIERNCQNSP+ L R +SY
Sbjct: 1 MGRGPPPGTGRCFNCGMDGHWARDCKAGDWKNKCYRCGESGHIERNCQNSPRNLRRDKSY 60
Query: 152 SRSPSPRRGRSRSRSYSRGRSDSRSRSPVKRDRSVERFERRTRSPRDSRSPK---RRRNS 208
SRSPSPR GR RSRSYSR RS SRSRSP R R RS S S RR S
Sbjct: 61 SRSPSPRGGRGRSRSYSRSRSYSRSRSPSGSPRGGRRERDERRSRSLSYSRSASPRRSVS 120
Query: 209 PPSSKGRKRSPT----PDERSPQDQRSPSPRDRRQANGSEYSGSPRG-----KSRSPVDD 259
P K R R+P P SP+ + SP +D NGS++ G+P G +SRSP D
Sbjct: 121 PAKEKERSRTPNGSRSPRSPSPRAEVSPPLKDNGARNGSDHEGNPGGGENSKRSRSPSD- 179
Query: 260 ADGPEDRNYRSPPEENGRSRSRSLSPVPRDDRSPI-----DDDDNHGDPRGSES 308
YRS P NGR SP PRDDRSP +DD+ G PRGS+S
Sbjct: 180 -------GYRS-PVANGR------SPSPRDDRSPSPKGNNEDDERRGSPRGSQS 219
>gi|238010422|gb|ACR36246.1| unknown [Zea mays]
gi|413950157|gb|AFW82806.1| hypothetical protein ZEAMMB73_743489 [Zea mays]
Length = 261
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 50/55 (90%), Positives = 54/55 (98%)
Query: 93 LGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLR 147
+GRGPPPG+GRCFNCG+DGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+ LR
Sbjct: 1 MGRGPPPGTGRCFNCGVDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRSLR 55
>gi|195624934|gb|ACG34297.1| hypothetical protein [Zea mays]
Length = 261
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 50/55 (90%), Positives = 54/55 (98%)
Query: 93 LGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLR 147
+GRGPPPG+GRCFNCG+DGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP+ LR
Sbjct: 1 MGRGPPPGTGRCFNCGVDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRSLR 55
>gi|242089653|ref|XP_002440659.1| hypothetical protein SORBIDRAFT_09g004723 [Sorghum bicolor]
gi|241945944|gb|EES19089.1| hypothetical protein SORBIDRAFT_09g004723 [Sorghum bicolor]
Length = 123
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 86/137 (62%), Gaps = 26/137 (18%)
Query: 1 MPRYDDRY----------GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVE 50
M RYD RY G ++L+V ++S T+ D+ ++FS+YGR+R ++K ++ FV
Sbjct: 3 MTRYDTRYIHDDQNDQQDGNSKLFVSNISSLTQENDISDLFSKYGRVRKTNLKENYGFV- 61
Query: 51 FSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGID 110
DADDAR LNG++ +G+RI V+FA G PRGP S + L C+NCG +
Sbjct: 62 -----DADDARCELNGQEFNGNRISVKFATGVPRGPVDSAQIL----------CYNCGAE 106
Query: 111 GHWARDCKAGDWKNKCY 127
GH++ DCKAGDWK++CY
Sbjct: 107 GHFSSDCKAGDWKDRCY 123
>gi|448878184|gb|AGE46055.1| arginine/serine-rich splicing factor RS2Z37B transcript IV [Zea
mays]
Length = 95
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 66/72 (91%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MPRYDDRYGGTRLYVGRLA RTRSRDLE +F +YGRIR+V++KRD+AF+EFS+ RDAD+A
Sbjct: 1 MPRYDDRYGGTRLYVGRLAPRTRSRDLEYLFGKYGRIREVELKRDYAFIEFSEHRDADEA 60
Query: 61 RYSLNGRDVDGS 72
RY L+GRDV+ S
Sbjct: 61 RYQLDGRDVEAS 72
>gi|146179448|ref|XP_001020597.2| hypothetical protein TTHERM_00219250 [Tetrahymena thermophila]
gi|146144570|gb|EAS00352.2| hypothetical protein TTHERM_00219250 [Tetrahymena thermophila
SB210]
Length = 256
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 81/129 (62%), Gaps = 10/129 (7%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--FAFVEFSDPRDADDARYSLNGRDVD 70
++VG+L+SR R DL + F RYGRIRD+D +R FAF+E+S DA A ++G+ +
Sbjct: 13 IFVGKLSSRVREEDLRDEFRRYGRIRDIDFRRQRGFAFIEYSSSSDAKQAVEDMDGQRFE 72
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCG 130
+RI+V++ +R R P + C+NCG GHWA +CK G+W N+CYRCG
Sbjct: 73 DTRIVVQYKE--------NRSDRNRRGPSTADVCYNCGRKGHWANECKEGNWNNRCYRCG 124
Query: 131 ERGHIERNC 139
+ GH+++ C
Sbjct: 125 KSGHLKKEC 133
>gi|145539490|ref|XP_001455435.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423243|emb|CAK88038.1| unnamed protein product [Paramecium tetraurelia]
Length = 194
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 86/150 (57%), Gaps = 23/150 (15%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
++YVGRL +T DL++ F RYG+I+D+D++ AF+EF DA A ++G+ + G
Sbjct: 4 QIYVGRLGQKTSREDLQKEFQRYGKIKDIDLRSTHAFIEFEGRDDAKKAISQMDGKRIGG 63
Query: 72 SRIIVEFARGGPRGPGGSRE--YLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRC 129
RI V+ SR+ +LG P CFNCG GHWA DCK GD ++ CYRC
Sbjct: 64 DRITVK-----------SRDNRHLGANGPTARDVCFNCGRKGHWANDCKEGDLRDTCYRC 112
Query: 130 GERGHIERNCQNSPKKLRPRSYSRSPSPRR 159
++GH+ ++C PK SR+PS R
Sbjct: 113 YQKGHLRKDC---PK-------SRTPSVTR 132
>gi|145512962|ref|XP_001442392.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409745|emb|CAK74995.1| unnamed protein product [Paramecium tetraurelia]
Length = 196
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 75/128 (58%), Gaps = 9/128 (7%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
++YVGRL S+ R DL++ F +YG+I+D+D++ AF+EF +A A ++GR + G
Sbjct: 4 QIYVGRLGSKIRREDLQQEFEKYGKIKDIDLRSTHAFIEFEASDEAKQAISQVDGRRIGG 63
Query: 72 SRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGE 131
R+ V+ P G G P CFNCG GHWA +CK GD + CYRC +
Sbjct: 64 DRVTVKQRDDRPSGVRG---------PTTRDVCFNCGRKGHWANECKEGDLRETCYRCYK 114
Query: 132 RGHIERNC 139
+GHI++ C
Sbjct: 115 KGHIKKEC 122
>gi|440803033|gb|ELR23947.1| hypothetical protein ACA1_075260 [Acanthamoeba castellanii str.
Neff]
Length = 178
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 78/135 (57%), Gaps = 33/135 (24%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGS 72
+YVGRL+SRTR RDLE+ FS+YGRI +DMK +AF+E++D RDADDA ++G D+DG+
Sbjct: 8 VYVGRLSSRTRERDLEDAFSKYGRIIRLDMKAGYAFIEYNDSRDADDAVRGMDGNDLDGA 67
Query: 73 RIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG------------ 120
RI VE + G GRCF+CG +GHWARDC+ G
Sbjct: 68 RISVEPSH------------------RGEGRCFSCGKEGHWARDCREGPRGGSRMDPRDR 109
Query: 121 ---DWKNKCYRCGER 132
CY CGE+
Sbjct: 110 RGAGPARACYSCGEQ 124
>gi|222424795|dbj|BAH20350.1| AT2G37340 [Arabidopsis thaliana]
Length = 193
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/47 (91%), Positives = 46/47 (97%)
Query: 101 SGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKLR 147
+GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIERNC+NSPKKLR
Sbjct: 1 AGRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLR 47
>gi|391330800|ref|XP_003739841.1| PREDICTED: serine/arginine-rich splicing factor 4-like
[Metaseiulus occidentalis]
Length = 303
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 60/77 (77%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
RLYVGRL+ RTR RDLE +FS YGRIR++ +K FAFVEF D RDA+DA Y LNG+D+ G
Sbjct: 8 RLYVGRLSHRTRERDLERLFSPYGRIREILLKSGFAFVEFEDTRDAEDACYELNGKDLLG 67
Query: 72 SRIIVEFARGGPRGPGG 88
RI+VE A+G RG GG
Sbjct: 68 DRIVVEMAKGTERGRGG 84
>gi|413918660|gb|AFW58592.1| hypothetical protein ZEAMMB73_952615 [Zea mays]
Length = 208
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 106/202 (52%), Gaps = 25/202 (12%)
Query: 65 NGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKN 124
+G GS+ ++ A RGPGG G+GP S RC+N G+DGHW RDCK+GDW++
Sbjct: 18 HGFATRGSKFVLTGALLAQRGPGGV-PLDGKGPSFPS-RCYNYGMDGHWVRDCKSGDWRD 75
Query: 125 KCYRCGERGHIERNCQNSPKKL-----RPRSYSRSPSPRRGRSRSRS--------YSRGR 171
+C+RCGE GHIERNC+NS K L R RSY RS SP G+ R RS RGR
Sbjct: 76 RCFRCGELGHIERNCKNSSKDLKYFLERGRSYLRSASPHHGKVRRRSYSRSLSPYLGRGR 135
Query: 172 SDSRSRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTPDERSPQDQRS 231
S SRSP + RR RS S S R NS + + R P +RS
Sbjct: 136 GRSYSRSP-------SHYHRRGRSWSYSWSQSPRNNSKAYGEELPSIRSGYSRGP--RRS 186
Query: 232 PSPRDRRQAN-GSEYSGSPRGK 252
P +R + N GS G RGK
Sbjct: 187 SPPMERAECNGGSPMRGEARGK 208
>gi|405963003|gb|EKC28616.1| Splicing factor, arginine/serine-rich 4 [Crassostrea gigas]
Length = 553
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 57/76 (75%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
GTR+Y+GRL+ R RD+E F YGR+RDV +K + FVEF D RDADDA Y LNG+D+
Sbjct: 241 GTRVYIGRLSHHARERDVERFFKGYGRLRDVMLKNGYGFVEFEDYRDADDAVYELNGKDL 300
Query: 70 DGSRIIVEFARGGPRG 85
G R+IVE ARGGPRG
Sbjct: 301 AGERVIVEHARGGPRG 316
>gi|145549079|ref|XP_001460219.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428048|emb|CAK92822.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 87/150 (58%), Gaps = 21/150 (14%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSL-NGRDVD 70
++YVGRL+SR R L++ F ++G+I+D+D++ AFVEF + DA A + N R +
Sbjct: 4 QVYVGRLSSRIRREHLQQEFEKFGKIKDIDLRNTHAFVEFENGDDAKAAISKMDNKRLNE 63
Query: 71 GS-RIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRC 129
GS RI V+ P+G G P CFNCG GHWA +CK GD ++ CYRC
Sbjct: 64 GSDRITVKPRDDRPQGARG---------PTSRDVCFNCGRKGHWANECKEGDLRDTCYRC 114
Query: 130 GERGHIERNCQNSPKKLRPRSYSRSPSPRR 159
++GH+ ++C PK SRSPS +R
Sbjct: 115 YKKGHVRKDC---PK-------SRSPSEKR 134
>gi|281210715|gb|EFA84881.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 542
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 65/109 (59%), Gaps = 18/109 (16%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD----FAFVEFSDPRDADDARYSLNGRD 68
LY+G L + T +RDL+ +FS YG I+ D+K+ FAF+EF + RDADDA +LNG
Sbjct: 3 LYIGGLTAETNARDLDNLFSVYGTIQRNDIKKTSGRCFAFIEFKERRDADDALKALNGAK 62
Query: 69 VDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+ GS+I VE+++GG + P +CF C GHWA+DC
Sbjct: 63 LLGSKITVEWSKGGGKAP--------------DNKCFTCQQSGHWAKDC 97
>gi|324502984|gb|ADY41304.1| Serine/arginine-rich splicing factor 4 [Ascaris suum]
Length = 122
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 61/89 (68%), Gaps = 4/89 (4%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
R+Y+GRL+ R RD+E F YGRIRD+ +K F FVEF DPRDADDA Y LNG+D+
Sbjct: 3 ARVYIGRLSYRASERDIEHFFRGYGRIRDIVLKNGFGFVEFDDPRDADDAVYELNGKDLC 62
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPP 99
G RII+EF+R GPRG G Y PPP
Sbjct: 63 GERIILEFSRRGPRGRGMYDRY----PPP 87
>gi|324536071|gb|ADY49444.1| Serine/arginine-rich splicing factor 4 [Ascaris suum]
Length = 92
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 62/89 (69%), Gaps = 4/89 (4%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
R+Y+GRL+ R RD+E +F YGRIRD+ +K F FVEF DPRDADDA Y LNG+D+
Sbjct: 3 ARVYIGRLSYRASERDIEHLFRGYGRIRDIVLKNGFGFVEFDDPRDADDAVYELNGKDLC 62
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPP 99
G RII+EF+R GPRG G Y PPP
Sbjct: 63 GERIILEFSRRGPRGRGMYDRY----PPP 87
>gi|156406725|ref|XP_001641195.1| predicted protein [Nematostella vectensis]
gi|156228333|gb|EDO49132.1| predicted protein [Nematostella vectensis]
Length = 189
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 68/110 (61%), Gaps = 7/110 (6%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
GT+L+VGRL+ T+ RDLE +F YG++ D+K + F+E+ DPRDA++A N R +
Sbjct: 5 GTQLFVGRLSKETKLRDLENVFYLYGKLLRCDLKTAYGFIEYEDPRDAEEAMRRENNRKL 64
Query: 70 DGSRIIVEFARGGPRG-PGGSREYLGRGPPPGSG-RCFNCGIDGHWARDC 117
GSRI+VE+ R G RG P G G+ P G CF CG GHWA C
Sbjct: 65 FGSRIVVEYVRSGERGKPVG-----GQTRPTVVGDECFVCGKLGHWASSC 109
>gi|307192389|gb|EFN75624.1| Serine-arginine protein 55 [Harpegnathos saltator]
Length = 313
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 56/75 (74%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
TR++VG L R R RDLE+ F +YGRI++V MK FAFVEF D RDADDA Y LNG+++
Sbjct: 3 TRVFVGGLTYRVRERDLEKFFRKYGRIKEVAMKNGFAFVEFDDYRDADDAVYELNGKELL 62
Query: 71 GSRIIVEFARGGPRG 85
G RI VE ARG PRG
Sbjct: 63 GERITVERARGTPRG 77
>gi|170594581|ref|XP_001902042.1| Splicing factor, arginine/serine-rich 4 [Brugia malayi]
gi|158590986|gb|EDP29601.1| Splicing factor, arginine/serine-rich 4, putative [Brugia malayi]
Length = 347
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 7/92 (7%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
R+YVGRL+ R RD+E F YGRIRD+ +K F FVEF DPRDADDA Y LNG+++
Sbjct: 6 ARVYVGRLSYRASERDIEHFFRGYGRIRDIVLKNGFGFVEFDDPRDADDAVYELNGKELC 65
Query: 71 GSRIIVEFARGGPR---GPGGSREYLGRGPPP 99
G R+I+EF+R GPR G GG R PPP
Sbjct: 66 GERVILEFSRRGPRSRMGFGG----FDRFPPP 93
>gi|189233695|ref|XP_001812208.1| PREDICTED: similar to B52 CG10851-PA [Tribolium castaneum]
Length = 300
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 57/76 (75%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
GTR++VG L R R RD+E+ F +YGRI++V MK FAFVEF D RDADDA Y LNG+++
Sbjct: 2 GTRVFVGGLTYRVRERDIEKFFRKYGRIKEVAMKNGFAFVEFDDYRDADDAVYELNGKEL 61
Query: 70 DGSRIIVEFARGGPRG 85
G R+ VE ARG PRG
Sbjct: 62 LGERVSVERARGTPRG 77
>gi|270015083|gb|EFA11531.1| hypothetical protein TcasGA2_TC016051 [Tribolium castaneum]
Length = 303
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 57/76 (75%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
GTR++VG L R R RD+E+ F +YGRI++V MK FAFVEF D RDADDA Y LNG+++
Sbjct: 2 GTRVFVGGLTYRVRERDIEKFFRKYGRIKEVAMKNGFAFVEFDDYRDADDAVYELNGKEL 61
Query: 70 DGSRIIVEFARGGPRG 85
G R+ VE ARG PRG
Sbjct: 62 LGERVSVERARGTPRG 77
>gi|328871249|gb|EGG19620.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 299
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 83/160 (51%), Gaps = 33/160 (20%)
Query: 5 DDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSL 64
DD R+YVG+ +SRT +DLEE F ++G+I +DMK FAFVEF + + A+ A +
Sbjct: 54 DDALAERRIYVGKFSSRTGEKDLEETFKKFGKILSLDMKAGFAFVEFDNEKSANQAIDEM 113
Query: 65 NGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKN 124
+G++VDG ++IV+ + GG + S C+ C GHWAR+C GD
Sbjct: 114 DGKEVDGEKLIVQKSHGGRK--------------RSSDECYLCRGRGHWARNCPRGDRDR 159
Query: 125 -------------------KCYRCGERGHIERNCQNSPKK 145
KCY C GHI R+C++S ++
Sbjct: 160 DNRGGGRGGGRDNDRTRDIKCYNCNGYGHIARDCRSSSRR 199
>gi|345491212|ref|XP_001603815.2| PREDICTED: serine-arginine protein 55-like isoform 2 [Nasonia
vitripennis]
Length = 364
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 56/75 (74%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
TR++VG L R R RDLE+ F +YGRI++V MK FAFVEF D RDADDA Y LNG+++
Sbjct: 3 TRVFVGGLTYRVRERDLEKFFRKYGRIKEVAMKNGFAFVEFDDYRDADDAVYELNGKELL 62
Query: 71 GSRIIVEFARGGPRG 85
G RI VE ARG PRG
Sbjct: 63 GERITVERARGTPRG 77
>gi|393912529|gb|EFO18201.2| Sfrs5 protein [Loa loa]
Length = 287
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 7/92 (7%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
R+YVGRL+ R RD+E F YGRIRD+ +K F FVEF DPRDADDA Y LNG+++
Sbjct: 6 ARVYVGRLSYRASERDIEHFFRGYGRIRDIVLKNGFGFVEFDDPRDADDAVYELNGKELC 65
Query: 71 GSRIIVEFARGGPR---GPGGSREYLGRGPPP 99
G R+I+EF+R GPR G GG R PPP
Sbjct: 66 GERVILEFSRRGPRSRMGFGG----FDRFPPP 93
>gi|312088457|ref|XP_003145870.1| Sfrs5 protein [Loa loa]
Length = 370
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 7/92 (7%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
R+YVGRL+ R RD+E F YGRIRD+ +K F FVEF DPRDADDA Y LNG+++
Sbjct: 6 ARVYVGRLSYRASERDIEHFFRGYGRIRDIVLKNGFGFVEFDDPRDADDAVYELNGKELC 65
Query: 71 GSRIIVEFARGGPR---GPGGSREYLGRGPPP 99
G R+I+EF+R GPR G GG R PPP
Sbjct: 66 GERVILEFSRRGPRSRMGFGG----FDRFPPP 93
>gi|193716028|ref|XP_001949124.1| PREDICTED: serine-arginine protein 55-like isoform 1
[Acyrthosiphon pisum]
Length = 309
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 57/76 (75%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
GTR++VG L+ R R RDLE F + GR++D+ MK +AFVEF D RDADDA Y LNGR++
Sbjct: 4 GTRVFVGGLSHRVRERDLERFFQKIGRVKDIAMKNGYAFVEFDDYRDADDAVYELNGREL 63
Query: 70 DGSRIIVEFARGGPRG 85
+G R+ VE ARG PRG
Sbjct: 64 NGERVSVERARGTPRG 79
>gi|291224547|ref|XP_002732263.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 261
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 56/72 (77%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
GTR+Y+GRL+ +TR RD+E F +G +R+V++K F FVEF DPRDADDA Y LNG+D+
Sbjct: 2 GTRVYIGRLSYQTRERDVERFFRGFGHLREVNLKNGFGFVEFDDPRDADDAVYELNGKDL 61
Query: 70 DGSRIIVEFARG 81
G R+I+E ARG
Sbjct: 62 CGERVIIEHARG 73
>gi|443712169|gb|ELU05591.1| hypothetical protein CAPTEDRAFT_222188 [Capitella teleta]
Length = 225
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 12/112 (10%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMK----RDFAFVEFSDPRDADDARYSLNGRD 68
L++GRL TR+RDLE+ F +YGRI D+K +AF++F D RDA+DA NGR+
Sbjct: 9 LFIGRLDKHTRTRDLEDRFEKYGRILRCDVKYGAEMAYAFLDFEDHRDAEDALKEENGRE 68
Query: 69 VDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
G ++VE+A+G PR S++ C+ C GHWARDCK G
Sbjct: 69 YQGVSMVVEWAKGAPRRQQSSQQ--------AYDECYKCHRSGHWARDCKEG 112
>gi|170045194|ref|XP_001850202.1| 52K active chromatin boundary protein [Culex quinquefasciatus]
gi|167868189|gb|EDS31572.1| 52K active chromatin boundary protein [Culex quinquefasciatus]
Length = 370
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRGPGGSRE 91
G R++VE ARG RGPGG RE
Sbjct: 63 LGERVVVEPARGTARGPGGRRE 84
>gi|291244600|ref|XP_002742185.1| PREDICTED: alternative splicing factor SRp20/9G8, putative-like
[Saccoglossus kowalevskii]
Length = 275
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 69/113 (61%), Gaps = 15/113 (13%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMK----RDFAFVEFSDPRDADDARYSLN 65
G +L++GRL+ +TR RDLE+IF+ YGR+ D+K +AFV++ D RDA+DA N
Sbjct: 6 GAQLFIGRLSKQTRQRDLEDIFTAYGRLSRCDVKYGTGMAYAFVDYEDRRDAEDAIKYEN 65
Query: 66 GRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCK 118
GR+V G I+VE+AR GPR RG C+ C GHWARDC+
Sbjct: 66 GREVCGQSIVVEWAR-GPR----------RGFVQAEDECYKCHRSGHWARDCR 107
>gi|427777415|gb|JAA54159.1| Putative alternative splicing factor [Rhipicephalus pulchellus]
Length = 484
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 54/76 (71%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
TR+YVG L+ R R RDLE F +G+IR+V +K F FVEF D RDADDA Y LNGR++D
Sbjct: 2 TRVYVGHLSYRVRERDLERFFRGFGKIREVLLKNGFGFVEFDDYRDADDAVYELNGRELD 61
Query: 71 GSRIIVEFARGGPRGP 86
G R++VE A G R P
Sbjct: 62 GERVVVELAHGTARRP 77
>gi|291224545|ref|XP_002732262.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 274
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 59/81 (72%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
+ Y + GTR+Y+GRL+ +TR RD+E F YGR+R++++K F FVEF DPRD+DDA
Sbjct: 18 VLNYTEITMGTRVYIGRLSYQTRERDVERFFRGYGRLREINLKNGFGFVEFEDPRDSDDA 77
Query: 61 RYSLNGRDVDGSRIIVEFARG 81
Y LNG+++ G R+ +E ARG
Sbjct: 78 VYELNGKELCGERVTIEHARG 98
>gi|196004628|ref|XP_002112181.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
gi|190586080|gb|EDV26148.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
Length = 266
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 54/71 (76%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
TR+YVGRL+ R R RD+E F +G+IR+V +K F FVEF DPRDA+DA Y LN RD+
Sbjct: 2 TRVYVGRLSYRARERDVEHFFRGFGKIREVTLKNGFGFVEFDDPRDAEDAIYELNNRDLM 61
Query: 71 GSRIIVEFARG 81
G R+IVEFA+G
Sbjct: 62 GERVIVEFAKG 72
>gi|339246347|ref|XP_003374807.1| splicing factor, arginine/serine-rich 6 [Trichinella spiralis]
gi|316971934|gb|EFV55647.1| splicing factor, arginine/serine-rich 6 [Trichinella spiralis]
Length = 305
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 55/77 (71%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRD 68
+R+Y+GRL R R RD+E+ F YGRIR++ +K F FVEF DPRDADDA Y LNGR+
Sbjct: 88 ASSRVYIGRLPYRARERDVEDFFKGYGRIREILLKNGFGFVEFDDPRDADDAVYHLNGRE 147
Query: 69 VDGSRIIVEFARGGPRG 85
+ G RIIVE + P+G
Sbjct: 148 LCGERIIVEMTKRPPKG 164
>gi|239790646|dbj|BAH71871.1| ACYPI003349 [Acyrthosiphon pisum]
Length = 160
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 57/76 (75%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
GTR++VG L+ R R RDLE F + GR++D+ MK +AFVEF D RDADDA Y LNGR++
Sbjct: 4 GTRVFVGGLSHRVRERDLERFFQKIGRVKDIAMKNGYAFVEFDDYRDADDAVYELNGREL 63
Query: 70 DGSRIIVEFARGGPRG 85
+G R+ VE ARG PRG
Sbjct: 64 NGERVSVERARGTPRG 79
>gi|198415633|ref|XP_002121331.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
[Ciona intestinalis]
Length = 292
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+++GRL+ R R D+E F +G+IRD+++K + FVEF D RDADDA Y +N RD+
Sbjct: 3 GSRVFIGRLSHRARENDVERFFKGFGKIRDINLKNGYGFVEFDDSRDADDAVYEMNNRDL 62
Query: 70 DGSRIIVEFARGGPRGPGG 88
G R+ VE ARG PR GG
Sbjct: 63 CGERVTVELARGVPRSSGG 81
>gi|326932930|ref|XP_003212564.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 475
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|281201086|gb|EFA75300.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 305
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 72/138 (52%), Gaps = 24/138 (17%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+YVGR+++RT +L++ F R+G + +D+K +AFVEF D + A+DA ++N D+DG
Sbjct: 69 RIYVGRISTRTSREELQDNFKRFGEVLSMDIKTGYAFVEFKDEKSANDAINAMNNTDLDG 128
Query: 72 SRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC----------KAGD 121
RIIV+ + GG + S C+ C GHWAR C G
Sbjct: 129 ERIIVQKSHGGRKRT--------------SDECYICRGRGHWARSCPRNNSSGSSGGRGS 174
Query: 122 WKNKCYRCGERGHIERNC 139
KCY C GHI R C
Sbjct: 175 RDIKCYTCNGYGHIAREC 192
>gi|225706140|gb|ACO08916.1| Splicing factor, arginine/serine-rich 4 [Osmerus mordax]
Length = 101
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 60/86 (69%), Gaps = 4/86 (4%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+Y+GRL+ R R +D+E+ F YG+I +VD+K + FVEF DPRDADDA Y LNG+D+
Sbjct: 2 SRVYIGRLSYRAREKDVEKFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKDLC 61
Query: 71 GSRIIVEFARG----GPRGPGGSREY 92
G R+IVE +G G G GG +Y
Sbjct: 62 GERVIVEHTKGPRRDGSYGSGGRSKY 87
>gi|165377173|ref|NP_065612.2| serine/arginine-rich splicing factor 4 [Mus musculus]
gi|26449170|dbj|BAC36925.1| unnamed protein product [Mus musculus]
gi|74152317|dbj|BAE33925.1| unnamed protein product [Mus musculus]
gi|148698178|gb|EDL30125.1| splicing factor, arginine/serine-rich 4 (SRp75) [Mus musculus]
Length = 491
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|126328783|ref|XP_001365267.1| PREDICTED: serine/arginine-rich splicing factor 4-like
[Monodelphis domestica]
Length = 491
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|426328680|ref|XP_004025378.1| PREDICTED: uncharacterized protein LOC101134512, partial [Gorilla
gorilla gorilla]
Length = 434
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 1 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 60
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 61 ERVIVEHARG 70
>gi|20978758|sp|Q8VE97.1|SRSF4_MOUSE RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Splicing factor, arginine/serine-rich 4
gi|18043896|gb|AAH19437.1| Sfrs4 protein [Mus musculus]
Length = 489
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|301788378|ref|XP_002929604.1| PREDICTED: hypothetical protein LOC100475275 [Ailuropoda
melanoleuca]
Length = 498
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|348571040|ref|XP_003471304.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Cavia
porcellus]
Length = 497
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|157822515|ref|NP_001102155.1| splicing factor, arginine/serine-rich 4 [Rattus norvegicus]
gi|149024115|gb|EDL80612.1| similar to Sfrs4 protein (predicted) [Rattus norvegicus]
Length = 488
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|198421232|ref|XP_002126906.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
isoform 1 [Ciona intestinalis]
Length = 272
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 55/78 (70%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+Y+GRL+ R R D+E F YG+I D+ +K F FV F D RDADDA + LNG+ +
Sbjct: 5 SRVYIGRLSHRARENDVEHFFRGYGKINDLMLKNGFGFVIFDDERDADDAIHDLNGKSLC 64
Query: 71 GSRIIVEFARGGPRGPGG 88
G R+++E A+G PRGPGG
Sbjct: 65 GERVMLEIAKGTPRGPGG 82
>gi|395856813|ref|XP_003800813.1| PREDICTED: serine/arginine-rich splicing factor 4 [Otolemur
garnettii]
Length = 503
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|198421230|ref|XP_002126938.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
isoform 2 [Ciona intestinalis]
Length = 280
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 55/78 (70%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+Y+GRL+ R R D+E F YG+I D+ +K F FV F D RDADDA + LNG+ +
Sbjct: 5 SRVYIGRLSHRARENDVEHFFRGYGKINDLMLKNGFGFVIFDDERDADDAIHDLNGKSLC 64
Query: 71 GSRIIVEFARGGPRGPGG 88
G R+++E A+G PRGPGG
Sbjct: 65 GERVMLEIAKGTPRGPGG 82
>gi|410911524|ref|XP_003969240.1| PREDICTED: uncharacterized protein LOC101080136 isoform 2 [Takifugu
rubripes]
Length = 374
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 65/106 (61%), Gaps = 11/106 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+Y+GRL+ R R D+E F YG+I +VD+K + FVEF DPRDADDA Y LNG+++
Sbjct: 2 SRVYIGRLSYRARENDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKELC 61
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
G R+IVE + GPR GG Y GR P G G W RD
Sbjct: 62 GERVIVEHTK-GPRRDGG---YSGRSKPRPGGY-------GRWGRD 96
>gi|351695941|gb|EHA98859.1| Splicing factor, arginine/serine-rich 4 [Heterocephalus glaber]
Length = 489
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|410966619|ref|XP_003989828.1| PREDICTED: serine/arginine-rich splicing factor 4 [Felis catus]
Length = 499
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|21361282|ref|NP_005617.2| serine/arginine-rich splicing factor 4 [Homo sapiens]
gi|20981726|sp|Q08170.2|SRSF4_HUMAN RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Pre-mRNA-splicing factor SRP75; AltName:
Full=SRP001LB; AltName: Full=Splicing factor,
arginine/serine-rich 4
gi|12803875|gb|AAH02781.1| Splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|30583669|gb|AAP36083.1| splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|60655747|gb|AAX32437.1| splicing factor arginine/serine-rich 4 [synthetic construct]
gi|123994341|gb|ABM84772.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
Length = 494
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|403293287|ref|XP_003937651.1| PREDICTED: serine/arginine-rich splicing factor 4 [Saimiri
boliviensis boliviensis]
Length = 500
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|281340422|gb|EFB16006.1| hypothetical protein PANDA_019831 [Ailuropoda melanoleuca]
Length = 488
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|241574282|ref|XP_002403075.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502148|gb|EEC11642.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 364
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+YVGRL R RDLE F +GRIR++ +K F FVEF DPRDADDA Y LNG+D+
Sbjct: 3 SRVYVGRLNYDVRERDLERFFKGFGRIREISIKNGFGFVEFDDPRDADDAVYELNGKDLM 62
Query: 71 GSRIIVEFARGGPRG 85
G R+ VE ARG RG
Sbjct: 63 GDRVSVELARGIRRG 77
>gi|119628064|gb|EAX07659.1| splicing factor, arginine/serine-rich 4, isoform CRA_c [Homo
sapiens]
Length = 464
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|431891168|gb|ELK02045.1| Splicing factor, arginine/serine-rich 4 [Pteropus alecto]
Length = 500
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|307438|gb|AAA36649.1| pre-mRNA splicing factor [Homo sapiens]
Length = 494
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|402853658|ref|XP_003891508.1| PREDICTED: serine/arginine-rich splicing factor 4 [Papio anubis]
Length = 494
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|395730870|ref|XP_003775801.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 4 [Pongo abelii]
Length = 492
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|114555162|ref|XP_001155042.1| PREDICTED: serine/arginine-rich splicing factor 4 isoform 5 [Pan
troglodytes]
gi|397515847|ref|XP_003828154.1| PREDICTED: serine/arginine-rich splicing factor 4 [Pan paniscus]
gi|261858864|dbj|BAI45954.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
gi|410219650|gb|JAA07044.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253776|gb|JAA14855.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253778|gb|JAA14856.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410300938|gb|JAA29069.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410356834|gb|JAA44544.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
Length = 494
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|386780975|ref|NP_001247807.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|355745074|gb|EHH49699.1| hypothetical protein EGM_00406 [Macaca fascicularis]
gi|380787433|gb|AFE65592.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|383408863|gb|AFH27645.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|30585347|gb|AAP36946.1| Homo sapiens splicing factor, arginine/serine-rich 4 [synthetic
construct]
gi|60652653|gb|AAX29021.1| splicing factor arginine/serine-rich 4 [synthetic construct]
Length = 495
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|119628063|gb|EAX07658.1| splicing factor, arginine/serine-rich 4, isoform CRA_b [Homo
sapiens]
gi|158256450|dbj|BAF84198.1| unnamed protein product [Homo sapiens]
Length = 494
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|442754133|gb|JAA69226.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 363
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+YVGRL R RDLE F +GRIR++ +K F FVEF DPRDADDA Y LNG+D+
Sbjct: 3 SRVYVGRLNYDVRERDLERFFKGFGRIREISIKNGFGFVEFDDPRDADDAVYELNGKDLM 62
Query: 71 GSRIIVEFARGGPRG 85
G R+ VE ARG RG
Sbjct: 63 GDRVSVELARGIRRG 77
>gi|296207272|ref|XP_002750572.1| PREDICTED: serine/arginine-rich splicing factor 4 [Callithrix
jacchus]
Length = 500
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|155372181|ref|NP_001094701.1| serine/arginine-rich splicing factor 4 [Bos taurus]
gi|154425888|gb|AAI51319.1| SFRS4 protein [Bos taurus]
gi|296490028|tpg|DAA32141.1| TPA: splicing factor, arginine/serine-rich 4 [Bos taurus]
Length = 493
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|384939756|gb|AFI33483.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|332245240|ref|XP_003271770.1| PREDICTED: uncharacterized protein LOC100597914 isoform 1
[Nomascus leucogenys]
Length = 494
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|344287504|ref|XP_003415493.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Loxodonta
africana]
Length = 500
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|148224986|ref|NP_001080148.1| splicing factor, arginine/serine-rich 6 [Xenopus laevis]
gi|28422195|gb|AAH44265.1| B52-prov protein [Xenopus laevis]
Length = 660
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 50/70 (71%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+YVGRL R +D++ F YG++ +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYVGRLGYHVREKDIQRFFGSYGKLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|116175257|ref|NP_001070684.1| serine/arginine-rich splicing factor 4 [Sus scrofa]
gi|115371753|gb|ABI96201.1| SFRS4 [Sus scrofa]
Length = 491
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|62898449|dbj|BAD97164.1| splicing factor, arginine/serine-rich 4 variant [Homo sapiens]
Length = 382
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|307189409|gb|EFN73819.1| Serine-arginine protein 55 [Camponotus floridanus]
Length = 387
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 53/76 (69%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
GTR+YVG L TR RDLE F YGR RDV +K + FVEF D RDADDA Y LNG+++
Sbjct: 56 GTRVYVGGLPYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYRDADDAVYELNGKEL 115
Query: 70 DGSRIIVEFARGGPRG 85
G RI VE ARG PRG
Sbjct: 116 LGERITVERARGTPRG 131
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFV 49
TR++VG L R R RDLE+ F +YGRI++V MK FAFV
Sbjct: 3 TRVFVGGLTYRVRERDLEKFFRKYGRIKEVAMKNGFAFV 41
>gi|347972221|ref|XP_003436860.1| AGAP004592-PE [Anopheles gambiae str. PEST]
gi|333469348|gb|EGK97259.1| AGAP004592-PE [Anopheles gambiae str. PEST]
Length = 351
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 54/79 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRGPGG 88
G R++VE ARG RGP G
Sbjct: 63 LGERVVVEPARGTARGPSG 81
>gi|347972223|ref|XP_315232.3| AGAP004592-PA [Anopheles gambiae str. PEST]
gi|347972225|ref|XP_003436861.1| AGAP004592-PH [Anopheles gambiae str. PEST]
gi|333469344|gb|EAA10559.4| AGAP004592-PA [Anopheles gambiae str. PEST]
gi|333469351|gb|EGK97262.1| AGAP004592-PH [Anopheles gambiae str. PEST]
Length = 345
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 54/79 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRGPGG 88
G R++VE ARG RGP G
Sbjct: 63 LGERVVVEPARGTARGPSG 81
>gi|390352204|ref|XP_003727843.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Strongylocentrotus purpuratus]
Length = 302
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 55/74 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+YVGRL+ + R RD+E F +GRIR++++K F FVEF D RDADDA Y LNG+++ G
Sbjct: 5 RVYVGRLSYQARERDVERFFRGFGRIREINLKNGFGFVEFEDYRDADDAVYELNGKELVG 64
Query: 72 SRIIVEFARGGPRG 85
R+I+E ARG RG
Sbjct: 65 ERVIIEHARGPARG 78
>gi|350408072|ref|XP_003488292.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Bombus impatiens]
Length = 394
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 53/76 (69%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
GTR+YVG L TR RDLE F YGR RDV +K + FVEF D RDADDA Y LNG+++
Sbjct: 56 GTRVYVGGLPYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYRDADDAVYELNGKEL 115
Query: 70 DGSRIIVEFARGGPRG 85
G RI VE ARG PRG
Sbjct: 116 LGERITVERARGTPRG 131
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFV 49
TR++VG L R R RDLE+ F +YGRI++V MK FAFV
Sbjct: 3 TRVFVGGLTYRVRERDLEKFFRKYGRIKEVAMKNGFAFV 41
>gi|390352206|ref|XP_798746.2| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Strongylocentrotus purpuratus]
Length = 349
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 55/74 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+YVGRL+ + R RD+E F +GRIR++++K F FVEF D RDADDA Y LNG+++ G
Sbjct: 43 RVYVGRLSYQARERDVERFFRGFGRIREINLKNGFGFVEFEDYRDADDAVYELNGKELVG 102
Query: 72 SRIIVEFARGGPRG 85
R+I+E ARG RG
Sbjct: 103 ERVIIEHARGPARG 116
>gi|169404002|ref|NP_955868.1| serine/arginine-rich splicing factor 4 [Danio rerio]
gi|326676581|ref|XP_003200617.1| PREDICTED: hypothetical protein LOC321872 [Danio rerio]
gi|28461393|gb|AAH46895.1| Zgc:55809 [Danio rerio]
gi|182890456|gb|AAI64410.1| Zgc:55809 protein [Danio rerio]
Length = 366
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+YVG+L+ R R +D+E F YG+I +VD+K + FVEF DPRDADDA Y LNG+D+
Sbjct: 2 SRVYVGKLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKDLC 61
Query: 71 GSRIIVEFARGGPRGPGGSR 90
G R+IVE G R GG+R
Sbjct: 62 GKRVIVEHTI-GQRRDGGNR 80
>gi|328786878|ref|XP_391860.4| PREDICTED: serine/arginine-rich splicing factor 4 [Apis mellifera]
Length = 419
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 53/76 (69%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
GTR+YVG L TR RDLE F YGR RDV +K + FVEF D RDADDA Y LNG+++
Sbjct: 56 GTRVYVGGLPYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYRDADDAVYELNGKEL 115
Query: 70 DGSRIIVEFARGGPRG 85
G RI VE ARG PRG
Sbjct: 116 LGERITVERARGTPRG 131
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFV 49
TR++VG L R R RDLE+ F +YGRI++V MK FAFV
Sbjct: 3 TRVFVGGLTYRVRERDLEKFFRKYGRIKEVAMKNGFAFV 41
>gi|47575808|ref|NP_001001248.1| arginine/serine-rich splicing factor 4 isoform 1 [Xenopus
(Silurana) tropicalis]
gi|45872604|gb|AAH68213.1| splicing factor, arginine/serine-rich 6 [Xenopus (Silurana)
tropicalis]
Length = 568
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 50/70 (71%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL R +D++ F YG++ +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLGYHVREKDIQRFFGGYGKLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|350408075|ref|XP_003488293.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Bombus impatiens]
Length = 418
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 53/76 (69%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
GTR+YVG L TR RDLE F YGR RDV +K + FVEF D RDADDA Y LNG+++
Sbjct: 56 GTRVYVGGLPYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYRDADDAVYELNGKEL 115
Query: 70 DGSRIIVEFARGGPRG 85
G RI VE ARG PRG
Sbjct: 116 LGERITVERARGTPRG 131
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFV 49
TR++VG L R R RDLE+ F +YGRI++V MK FAFV
Sbjct: 3 TRVFVGGLTYRVRERDLEKFFRKYGRIKEVAMKNGFAFV 41
>gi|147904116|ref|NP_001079647.1| serine/arginine-rich splicing factor 6 [Xenopus laevis]
gi|28436899|gb|AAH46668.1| MGC52985 protein [Xenopus laevis]
Length = 667
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 50/70 (71%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL R +DL+ F YG++ ++D+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLGYHVREKDLQRFFGGYGKLLEIDLKNGYGFVEFEDSRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+I+E ARG
Sbjct: 63 ERVIIEHARG 72
>gi|339233572|ref|XP_003381903.1| putative RNA recognition [Trichinella spiralis]
gi|316979226|gb|EFV62043.1| putative RNA recognition [Trichinella spiralis]
Length = 351
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 53/76 (69%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
GTR+YVGR+ R RD+E+ F +GRIR++ +K + FVEF DADDA Y LNGR++
Sbjct: 48 GTRVYVGRIPYRATERDIEKFFRGFGRIREIFLKNGYGFVEFEHTEDADDACYELNGREM 107
Query: 70 DGSRIIVEFARGGPRG 85
G R+IVE ARG P G
Sbjct: 108 FGERLIVEIARGTPHG 123
>gi|242012605|ref|XP_002427020.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
gi|212511265|gb|EEB14282.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
Length = 403
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 61/93 (65%), Gaps = 3/93 (3%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
GTR+Y+G L + RD+E F YGRIRD+ +K + FVEF D RDADDA Y LNG+D+
Sbjct: 3 GTRVYIGGLPYGVKDRDIERFFKGYGRIRDILIKNGYGFVEFDDYRDADDAVYELNGKDL 62
Query: 70 DGSRIIVEFARGGPRGP--GGSREYLGR-GPPP 99
G R+ VE ARG PRG R+ GR GPPP
Sbjct: 63 LGERVSVERARGTPRGSDRWKDRDRYGRFGPPP 95
>gi|383848642|ref|XP_003699957.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Megachile
rotundata]
Length = 418
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 53/76 (69%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
GTR+YVG L TR RDLE F YGR RDV +K + FVEF D RDADDA Y LNG+++
Sbjct: 56 GTRVYVGGLPYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYRDADDAVYELNGKEL 115
Query: 70 DGSRIIVEFARGGPRG 85
G RI VE ARG PRG
Sbjct: 116 LGERITVERARGTPRG 131
>gi|327283237|ref|XP_003226348.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Anolis
carolinensis]
Length = 343
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +DL+ FS YGR+ +VD+K + FVEF D RDA+DA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYHVREKDLQRFFSGYGRLLEVDLKNGYGFVEFEDSRDAEDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|449486099|ref|XP_002195735.2| PREDICTED: serine/arginine-rich splicing factor 6 [Taeniopygia
guttata]
Length = 348
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|90075970|dbj|BAE87665.1| unnamed protein product [Macaca fascicularis]
Length = 177
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 64/109 (58%), Gaps = 22/109 (20%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ +VD+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG----------------GPRG------PGGSREYLGRGPP 98
R+IVE ARG PR PGG R ++G GPP
Sbjct: 63 ERVIVEHARGPRRDRDGYSYGSRSESHPRALRALGDPGGGRRWVGLGPP 111
>gi|1403024|emb|CAA90876.1| hnRNP protein [Chironomus tentans]
Length = 322
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 54/76 (71%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L TR RDLE+ F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGTRERDLEKFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRG 85
G R++VE ARG RG
Sbjct: 63 LGERVVVEPARGTARG 78
>gi|325302612|tpg|DAA34674.1| TPA_inf: alternative splicing factor SRp55/B52/SRp75 [Amblyomma
variegatum]
Length = 281
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 64/103 (62%), Gaps = 10/103 (9%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
TR+++G L+ + R RD++ F YGR+ D+ +K F FVEF D RDADDA LNG+++
Sbjct: 3 TRVFIGHLSYQVRERDVDRFFKGYGRVGDIHLKNGFGFVEFEDHRDADDAIKDLNGKELL 62
Query: 71 GSRIIVEFARGGPRGPG------GSREYLGRGPPPGSGRCFNC 107
G R+ VE A G RGPG GSR++ PPG GR FN
Sbjct: 63 GERVSVELAHGSRRGPGGRIVAPGSRDWRS---PPGGGR-FNA 101
>gi|395505266|ref|XP_003756964.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2
[Sarcophilus harrisii]
Length = 321
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|347972229|ref|XP_003436863.1| AGAP004592-PD [Anopheles gambiae str. PEST]
gi|333469347|gb|EGK97258.1| AGAP004592-PD [Anopheles gambiae str. PEST]
Length = 138
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 54/79 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRGPGG 88
G R++VE ARG RGP G
Sbjct: 63 LGERVVVEPARGTARGPSG 81
>gi|395505264|ref|XP_003756963.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Sarcophilus harrisii]
Length = 340
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|2914669|gb|AAC04476.1| SRP0001LB [Homo sapiens]
Length = 192
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|126291113|ref|XP_001371339.1| PREDICTED: serine/arginine-rich splicing factor 6-like
[Monodelphis domestica]
Length = 340
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ +VD+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|431894401|gb|ELK04201.1| Splicing factor, arginine/serine-rich 6 [Pteropus alecto]
Length = 343
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ ++D+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|47212671|emb|CAF94152.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1550
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 52/71 (73%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+Y+GRL+ R R D+E F YG+I +VD+K + FVEF DPRDADDA Y LNG+++
Sbjct: 2 SRVYIGRLSYRARENDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKELC 61
Query: 71 GSRIIVEFARG 81
G R+IVE +G
Sbjct: 62 GERVIVEHTKG 72
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 46 FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 81
+ FVEF DPRDADDA Y LNG+++ G R+IVE +G
Sbjct: 1209 YGFVEFDDPRDADDAVYDLNGKELCGERVIVEHTKG 1244
>gi|393911086|gb|EJD76160.1| hypothetical protein LOAG_16828 [Loa loa]
Length = 407
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 55/76 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVGRL+ R RD+E F YGRI ++ +K +AFVEFSD RDA+DA + LNGR +
Sbjct: 2 GSRVYVGRLSYRAHERDIERFFRGYGRITEILLKNGYAFVEFSDRRDAEDAVHDLNGRSL 61
Query: 70 DGSRIIVEFARGGPRG 85
G R+IV+ A+ PRG
Sbjct: 62 LGDRVIVQNAKSRPRG 77
>gi|194374487|dbj|BAG57139.1| unnamed protein product [Homo sapiens]
Length = 158
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 52/71 (73%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
R+Y+GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+
Sbjct: 2 LRVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLC 61
Query: 71 GSRIIVEFARG 81
G R+IVE ARG
Sbjct: 62 GERVIVEHARG 72
>gi|347972235|ref|XP_003436866.1| AGAP004592-PB [Anopheles gambiae str. PEST]
gi|347972237|ref|XP_003436867.1| AGAP004592-PF [Anopheles gambiae str. PEST]
gi|333469345|gb|EGK97256.1| AGAP004592-PB [Anopheles gambiae str. PEST]
gi|333469349|gb|EGK97260.1| AGAP004592-PF [Anopheles gambiae str. PEST]
Length = 149
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 54/79 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRGPGG 88
G R++VE ARG RGP G
Sbjct: 63 LGERVVVEPARGTARGPSG 81
>gi|432936464|ref|XP_004082128.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Oryzias latipes]
Length = 289
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 55/76 (72%)
Query: 5 DDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSL 64
DD G+R+++GRL+ + R RD+E+ F YGRIR++++K F FVEF D RDADDA Y L
Sbjct: 15 DDTMSGSRVFIGRLSPQARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYEL 74
Query: 65 NGRDVDGSRIIVEFAR 80
NG+++ R+ +E AR
Sbjct: 75 NGKELLSERVTIEHAR 90
>gi|330800147|ref|XP_003288100.1| hypothetical protein DICPUDRAFT_78935 [Dictyostelium purpureum]
gi|325081861|gb|EGC35362.1| hypothetical protein DICPUDRAFT_78935 [Dictyostelium purpureum]
Length = 297
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 63/109 (57%), Gaps = 18/109 (16%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD----FAFVEFSDPRDADDARYSLNGRD 68
LY+GRL++ T R L + FS+YG I D+KR +AF+E+ + +DADDA +LNG
Sbjct: 3 LYIGRLSTDTTERHLNDHFSKYGTITRNDVKRSNGRCYAFIEYKEKKDADDALKALNGTT 62
Query: 69 VDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+ S+I VE+A+GG + +CF CG +GHW ++C
Sbjct: 63 LLNSKISVEWAKGGKNAD--------------NNKCFACGQEGHWIKNC 97
>gi|241574285|ref|XP_002403076.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502149|gb|EEC11643.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 268
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
TR+++G L+ + R +DL++ F YGR+ D+ +K F FVEF D RDADDA LNG+++
Sbjct: 3 TRVFIGHLSCQVREKDLDKFFKGYGRVGDIHLKNGFGFVEFDDHRDADDAISDLNGKELL 62
Query: 71 GSRIIVEFARGGPRGPGG 88
G R+ VE A G RGPGG
Sbjct: 63 GERVSVELAYGSRRGPGG 80
>gi|281210217|gb|EFA84385.1| CCHC-type Zn finger-containing protein [Polysphondylium pallidum
PN500]
Length = 274
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 63/109 (57%), Gaps = 14/109 (12%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+++YVG+LA R R++E+ F RYGRI + MK+ F F+E+S AD+A S + +
Sbjct: 2 SKIYVGQLAFDAREREIEDHFGRYGRISHIQMKKGFCFIEYSSRDAADEAINSSHRTNFL 61
Query: 71 GSRIIVE--FARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
G I+VE + G R P PG GRCF+C +GHWA++C
Sbjct: 62 GRSIVVEKSHSNGAKR------------PVPGEGRCFHCHQEGHWAKEC 98
>gi|347972231|ref|XP_003436864.1| AGAP004592-PC [Anopheles gambiae str. PEST]
gi|347972233|ref|XP_003436865.1| AGAP004592-PG [Anopheles gambiae str. PEST]
gi|333469346|gb|EGK97257.1| AGAP004592-PC [Anopheles gambiae str. PEST]
gi|333469350|gb|EGK97261.1| AGAP004592-PG [Anopheles gambiae str. PEST]
Length = 132
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 54/79 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRGPGG 88
G R++VE ARG RGP G
Sbjct: 63 LGERVVVEPARGTARGPSG 81
>gi|417399301|gb|JAA46673.1| Putative serine/arginine-rich splicing factor 6 [Desmodus
rotundus]
Length = 345
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ ++D+K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|71895047|ref|NP_001026014.1| splicing factor, arginine/serine-rich 6 [Gallus gallus]
gi|53133810|emb|CAG32234.1| hypothetical protein RCJMB04_20j14 [Gallus gallus]
Length = 348
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ +VD+K + FV+F D RDADDA Y LNG+D+ G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGRLLEVDLKNGYGFVKFEDSRDADDAVYELNGKDLCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|403290688|ref|XP_003936440.1| PREDICTED: serine/arginine-rich splicing factor 6 [Saimiri
boliviensis boliviensis]
Length = 344
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ +VD+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|410911522|ref|XP_003969239.1| PREDICTED: uncharacterized protein LOC101080136 isoform 1
[Takifugu rubripes]
Length = 374
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 52/71 (73%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+Y+GRL+ R R D+E F YG+I +VD+K + FVEF DPRDADDA Y LNG+++
Sbjct: 2 SRVYIGRLSYRARENDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKELC 61
Query: 71 GSRIIVEFARG 81
G R+IVE +G
Sbjct: 62 GERVIVEHTKG 72
>gi|432864638|ref|XP_004070386.1| PREDICTED: uncharacterized protein LOC101162527 isoform 2
[Oryzias latipes]
Length = 373
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YG++ +VDMK + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGKLLEVDMKNGYGFVEFEDNRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|432864636|ref|XP_004070385.1| PREDICTED: uncharacterized protein LOC101162527 isoform 1
[Oryzias latipes]
Length = 367
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YG++ +VDMK + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGKLLEVDMKNGYGFVEFEDNRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|405974565|gb|EKC39200.1| RNA-binding protein 4 [Crassostrea gigas]
Length = 226
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 9/110 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
T+LY+G L R DL+++F YG++ + D+ R++ F+ F +P +A A+ +L+G D +
Sbjct: 7 TKLYIGNLPETCRKADLQKMFEAYGKVIECDIVRNYCFIHFENPNEAKMAQANLDGVDFE 66
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
G ++ VE + R+ G G G G C+ CG +GHW++DC G
Sbjct: 67 GVKLKVEMSH------SKVRQKPGMG---GKGECYRCGKEGHWSKDCPKG 107
>gi|390462611|ref|XP_003732879.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 6-like [Callithrix jacchus]
Length = 344
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ +VD+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|348514746|ref|XP_003444901.1| PREDICTED: hypothetical protein LOC100690823 [Oreochromis
niloticus]
Length = 396
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YG++ ++D+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|432882989|ref|XP_004074178.1| PREDICTED: uncharacterized protein LOC101163182 isoform 2
[Oryzias latipes]
Length = 384
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 52/70 (74%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+Y+GRL+ R R +D+E F YG+I +VD+K + FVEF DPRDADDA Y LNG+++
Sbjct: 2 SRVYIGRLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKELC 61
Query: 71 GSRIIVEFAR 80
G R+IVE +
Sbjct: 62 GERVIVEHTK 71
>gi|442749577|gb|JAA66948.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 268
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
TR+++G L+ + R +DL++ F YGR+ D+ +K F FVEF D RDADDA LNG+++
Sbjct: 3 TRVFIGHLSCQVREKDLDKFFKGYGRVGDIHLKNGFGFVEFDDHRDADDAISDLNGKELL 62
Query: 71 GSRIIVEFARGGPRGPGG 88
G R+ VE A G RGPGG
Sbjct: 63 GERVSVELAYGSRRGPGG 80
>gi|440792856|gb|ELR14064.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 239
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 60/102 (58%), Gaps = 14/102 (13%)
Query: 17 RLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIV 76
RLA R RDLE++F +YG++ D+KR + FVE+ D RDA DA L+G V G+RI +
Sbjct: 27 RLALDCRPRDLEDLFYKYGKLTRCDVKRGYGFVEYEDRRDAQDALRDLDGVSVLGTRIAI 86
Query: 77 EFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCK 118
E+A+G R + CF CG +GHWARDCK
Sbjct: 87 EWAKGARR--------------TDTDTCFRCGEEGHWARDCK 114
>gi|346468607|gb|AEO34148.1| hypothetical protein [Amblyomma maculatum]
Length = 338
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+YVGRL R RDLE F +GRIR++ +K F FVEF D RDADDA Y LNG+++
Sbjct: 3 SRVYVGRLNYEVRERDLERFFKGFGRIREISIKNGFGFVEFDDHRDADDAVYELNGKELL 62
Query: 71 GSRIIVEFARGGPRGP 86
G R+ VE ARG RG
Sbjct: 63 GDRVSVELARGIRRGA 78
>gi|443710288|gb|ELU04543.1| hypothetical protein CAPTEDRAFT_220292 [Capitella teleta]
Length = 291
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 52/72 (72%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ + R RD+E F YGR+ D+ +K + FVEF D RDADDA Y LNG+D+ G
Sbjct: 4 RVYIGRLSYQVRERDVERFFKGYGRVTDILLKNGYGFVEFEDYRDADDAVYELNGKDLMG 63
Query: 72 SRIIVEFARGGP 83
R++VE A+G P
Sbjct: 64 DRVLVEHAKGTP 75
>gi|348517719|ref|XP_003446380.1| PREDICTED: serine/arginine-rich splicing factor 5-like
[Oreochromis niloticus]
Length = 293
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 52/73 (71%)
Query: 8 YGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGR 67
G R+++GRL+ R +D+E F YGRIRD+D+KR F FVEF DPRDA+DA Y L+G+
Sbjct: 1 MSGCRIFIGRLSPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK 60
Query: 68 DVDGSRIIVEFAR 80
++ R+ +E AR
Sbjct: 61 ELCNERVTIEHAR 73
>gi|241159531|ref|XP_002408582.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215494365|gb|EEC04006.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 339
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 53/77 (68%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
TR++VGRL R RDLE+ F YGRI +V +K + FVEF D RDA+DA + LNG+ +
Sbjct: 3 TRVFVGRLNYDVRERDLEKFFKGYGRIGEVLLKNGYGFVEFDDYRDAEDAVHDLNGKKLM 62
Query: 71 GSRIIVEFARGGPRGPG 87
G RI VE ARG RGPG
Sbjct: 63 GERISVELARGIRRGPG 79
>gi|410930984|ref|XP_003978877.1| PREDICTED: uncharacterized protein LOC101068731 [Takifugu
rubripes]
Length = 379
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YG++ ++D+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|47220462|emb|CAG03242.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1292
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YG++ ++D+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|395829006|ref|XP_003787652.1| PREDICTED: serine/arginine-rich splicing factor 6 [Otolemur
garnettii]
Length = 345
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ +VD+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|346468507|gb|AEO34098.1| hypothetical protein [Amblyomma maculatum]
Length = 280
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
TR+++G L+ + R RD++ F YGR+ D+ +K F FVEF D RDADDA LNG+++
Sbjct: 3 TRVFIGHLSYQVRERDVDRFFKGYGRVGDIHLKNGFGFVEFEDHRDADDAIKDLNGKELL 62
Query: 71 GSRIIVEFARGGPRGPGG 88
G R+ VE A G RGPGG
Sbjct: 63 GERVSVELAHGSRRGPGG 80
>gi|158255842|dbj|BAF83892.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ +VD+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|30584231|gb|AAP36364.1| Homo sapiens splicing factor, arginine/serine-rich 6 [synthetic
construct]
gi|61371415|gb|AAX43663.1| splicing factor arginine/serine-rich 6 [synthetic construct]
gi|61371422|gb|AAX43664.1| splicing factor arginine/serine-rich 6 [synthetic construct]
Length = 345
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ +VD+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|410215040|gb|JAA04739.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
gi|410302392|gb|JAA29796.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
gi|410360346|gb|JAA44682.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
Length = 344
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ +VD+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|20127499|ref|NP_006266.2| serine/arginine-rich splicing factor 6 [Homo sapiens]
gi|307078161|ref|NP_001182497.1| splicing factor, arginine/serine-rich 6 [Pongo abelii]
gi|332209067|ref|XP_003253632.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Nomascus leucogenys]
gi|397511164|ref|XP_003825949.1| PREDICTED: serine/arginine-rich splicing factor 6 [Pan paniscus]
gi|426391709|ref|XP_004062210.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Gorilla gorilla gorilla]
gi|20981728|sp|Q13247.2|SRSF6_HUMAN RecName: Full=Serine/arginine-rich splicing factor 6; AltName:
Full=Pre-mRNA-splicing factor SRP55; AltName:
Full=Splicing factor, arginine/serine-rich 6
gi|13905094|gb|AAH06832.1| Splicing factor, arginine/serine-rich 6 [Homo sapiens]
gi|119596370|gb|EAW75964.1| splicing factor, arginine/serine-rich 6, isoform CRA_a [Homo
sapiens]
gi|119596373|gb|EAW75967.1| splicing factor, arginine/serine-rich 6, isoform CRA_a [Homo
sapiens]
Length = 344
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ +VD+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|432882987|ref|XP_004074177.1| PREDICTED: uncharacterized protein LOC101163182 isoform 1
[Oryzias latipes]
Length = 372
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 52/70 (74%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+Y+GRL+ R R +D+E F YG+I +VD+K + FVEF DPRDADDA Y LNG+++
Sbjct: 2 SRVYIGRLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKELC 61
Query: 71 GSRIIVEFAR 80
G R+IVE +
Sbjct: 62 GERVIVEHTK 71
>gi|427777527|gb|JAA54215.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Rhipicephalus pulchellus]
Length = 363
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 52/75 (69%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+YVGRL R RDLE F +GRIR++ +K F FVEF D RDADDA Y LNG+++
Sbjct: 3 SRVYVGRLNYEVRERDLERFFKGFGRIREISIKNGFGFVEFDDHRDADDAVYELNGKELL 62
Query: 71 GSRIIVEFARGGPRG 85
G R+ VE ARG RG
Sbjct: 63 GDRVSVELARGIRRG 77
>gi|62087532|dbj|BAD92213.1| arginine/serine-rich splicing factor 6 variant [Homo sapiens]
Length = 279
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ +VD+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 37 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 96
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 97 ERVIVEHARG 106
>gi|348563835|ref|XP_003467712.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 6-like [Cavia porcellus]
Length = 341
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ +VD+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|402882500|ref|XP_003904778.1| PREDICTED: serine/arginine-rich splicing factor 6 [Papio anubis]
gi|380815566|gb|AFE79657.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|380815568|gb|AFE79658.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|383420733|gb|AFH33580.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|383420735|gb|AFH33581.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|384948770|gb|AFI37990.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|384948772|gb|AFI37991.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
Length = 343
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ +VD+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|348510431|ref|XP_003442749.1| PREDICTED: serine/arginine-rich splicing factor 4-like
[Oreochromis niloticus]
Length = 342
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+YVG+L+ R +D++ FS YG++ ++D+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYVGKLSYHVREKDIQRFFSGYGKLLEIDLKNGYGFVEFEDMRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+++E ARG
Sbjct: 63 ERVVIEHARG 72
>gi|426391711|ref|XP_004062211.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2
[Gorilla gorilla gorilla]
gi|221043204|dbj|BAH13279.1| unnamed protein product [Homo sapiens]
Length = 135
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ +VD+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|432882991|ref|XP_004074179.1| PREDICTED: uncharacterized protein LOC101163182 isoform 3
[Oryzias latipes]
Length = 388
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 52/70 (74%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+Y+GRL+ R R +D+E F YG+I +VD+K + FVEF DPRDADDA Y LNG+++
Sbjct: 2 SRVYIGRLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKELC 61
Query: 71 GSRIIVEFAR 80
G R+IVE +
Sbjct: 62 GERVIVEHTK 71
>gi|440893251|gb|ELR46093.1| Serine/arginine-rich splicing factor 6 [Bos grunniens mutus]
Length = 348
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ ++D+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|209154606|gb|ACI33535.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 329
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 51/72 (70%)
Query: 8 YGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGR 67
G R+++GRL+ R RD+E+ F YGRIR+V++K F FVEF DPRDADDA Y LNG+
Sbjct: 1 MSGCRVFIGRLSPHARERDVEKFFKGYGRIREVNLKNGFGFVEFDDPRDADDAVYELNGK 60
Query: 68 DVDGSRIIVEFA 79
++ R+ +E A
Sbjct: 61 ELCSERVTIEHA 72
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR---DFAFVEFSDPRDADDARYSLNGRD 68
R+ V L+SR +DL+++ + G + VD R + VEF+ D +A L+G D
Sbjct: 125 RIIVENLSSRISWQDLKDLMRKVGEVTFVDAHRTNKNEGVVEFASHSDMKNALDKLDGTD 184
Query: 69 VDGSRI 74
++G ++
Sbjct: 185 LNGRKL 190
>gi|197692203|dbj|BAG70065.1| splicing factor arginine/serine-rich 6 [Homo sapiens]
gi|197692451|dbj|BAG70189.1| splicing factor arginine/serine-rich 6 [Homo sapiens]
Length = 135
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ +VD+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|296481070|tpg|DAA23185.1| TPA: splicing factor, arginine/serine-rich 6 [Bos taurus]
Length = 345
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ ++D+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|116175261|ref|NP_001070685.1| serine/arginine-rich splicing factor 6 [Sus scrofa]
gi|115371751|gb|ABI96200.1| SFRS6 [Sus scrofa]
Length = 345
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ ++D+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|359322750|ref|XP_003639908.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Canis lupus familiaris]
Length = 344
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ ++D+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|348519443|ref|XP_003447240.1| PREDICTED: hypothetical protein LOC100690923 isoform 1
[Oreochromis niloticus]
Length = 390
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 51/67 (76%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+Y+GRL+ R R +D+E F YG+I +VD+K + FVEF DPRDADDA Y LNG+++
Sbjct: 2 SRVYIGRLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKELC 61
Query: 71 GSRIIVE 77
G R+IVE
Sbjct: 62 GERVIVE 68
>gi|260819154|ref|XP_002604902.1| hypothetical protein BRAFLDRAFT_114372 [Branchiostoma floridae]
gi|229290231|gb|EEN60912.1| hypothetical protein BRAFLDRAFT_114372 [Branchiostoma floridae]
Length = 289
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 51/68 (75%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+Y+GRL R +D+E F YGRIR++++K F FVEF DPRDADDA Y LNG+++
Sbjct: 2 GSRVYIGRLPYHAREKDVERFFRGYGRIREINLKNGFGFVEFDDPRDADDAVYELNGKEL 61
Query: 70 DGSRIIVE 77
G R+IVE
Sbjct: 62 CGERVIVE 69
>gi|91091338|ref|XP_966697.1| PREDICTED: similar to hnRNP protein [Tribolium castaneum]
Length = 282
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 52/76 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L T RDLE F YGR+RDV +K + FVEF D RDADDA Y LNG+ +
Sbjct: 3 GSRVYVGGLPYGTTERDLERFFRGYGRMRDVLIKNGYGFVEFDDHRDADDAVYELNGKKL 62
Query: 70 DGSRIIVEFARGGPRG 85
G R+ VE ARG PRG
Sbjct: 63 LGERVTVERARGTPRG 78
>gi|348519445|ref|XP_003447241.1| PREDICTED: hypothetical protein LOC100690923 isoform 2
[Oreochromis niloticus]
Length = 386
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 51/67 (76%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+Y+GRL+ R R +D+E F YG+I +VD+K + FVEF DPRDADDA Y LNG+++
Sbjct: 2 SRVYIGRLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKELC 61
Query: 71 GSRIIVE 77
G R+IVE
Sbjct: 62 GERVIVE 68
>gi|359322752|ref|XP_003639909.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2
[Canis lupus familiaris]
Length = 135
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ ++D+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|209155162|gb|ACI33813.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 316
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 51/71 (71%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R++VGRL R +D+E F YGRIRD+D+KR F FVEF DPRDA+DA Y L+G+++
Sbjct: 3 GCRIFVGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGKEL 62
Query: 70 DGSRIIVEFAR 80
R+ +E AR
Sbjct: 63 CNERVTIEHAR 73
>gi|386765708|ref|NP_788671.2| B52, isoform M [Drosophila melanogaster]
gi|386765712|ref|NP_001014619.2| B52, isoform O [Drosophila melanogaster]
gi|312596948|gb|ADQ89797.1| GH20537p [Drosophila melanogaster]
gi|383292689|gb|AAN13579.2| B52, isoform M [Drosophila melanogaster]
gi|383292691|gb|AAX52949.2| B52, isoform O [Drosophila melanogaster]
Length = 355
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRG 85
G R++VE ARG RG
Sbjct: 63 LGERVVVEPARGTARG 78
>gi|8497|emb|CAA41556.1| SRp55 [Drosophila melanogaster]
Length = 350
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRG 85
G R++VE ARG RG
Sbjct: 63 LGERVVVEPARGSARG 78
>gi|426232112|ref|XP_004010078.1| PREDICTED: uncharacterized protein LOC101116481 [Ovis aries]
Length = 233
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 52/70 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ ++D+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|111226239|ref|XP_001134500.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|90970421|gb|EAS66817.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 312
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 18/109 (16%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD----FAFVEFSDPRDADDARYSLNGRD 68
LY+GRL+ T ++L + FS+YG I D+K+ +AFVE+ + RDADDA +LNG
Sbjct: 3 LYIGRLSVETTQKNLNDHFSKYGTITRNDVKKTNGRCYAFVEYKERRDADDALKALNGTT 62
Query: 69 VDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+ S+I VE+A+GG + +CF CG +GHW + C
Sbjct: 63 LLNSKISVEWAKGGKNAD--------------NNKCFACGQEGHWIKSC 97
>gi|1049086|gb|AAA93072.1| SRp55-3, partial [Homo sapiens]
Length = 335
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 51/70 (72%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ +VD+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
+IVE ARG
Sbjct: 63 EHVIVEHARG 72
>gi|324507194|gb|ADY43052.1| Serine/arginine-rich splicing factor 4 [Ascaris suum]
Length = 360
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 52/75 (69%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
R+YVGRL+ R + RD+E F YG I +V MK +AFVEF+D RDADDA LNGR +
Sbjct: 3 ARVYVGRLSFRAQERDVERFFRGYGHISEVLMKNGYAFVEFTDYRDADDAVRDLNGRSLF 62
Query: 71 GSRIIVEFARGGPRG 85
G R+IVE A+ PRG
Sbjct: 63 GDRVIVELAKSRPRG 77
>gi|328714675|ref|XP_003245425.1| PREDICTED: serine-arginine protein 55-like isoform 2
[Acyrthosiphon pisum]
Length = 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 55/76 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+Y+G L R RD+++ F +GRI+++ +K + F+EF D RDADDA Y LNGR++
Sbjct: 4 GSRIYIGHLPYGVRERDVKKFFKGFGRIKEILLKNGYGFIEFDDYRDADDAVYELNGREL 63
Query: 70 DGSRIIVEFARGGPRG 85
+G R+ VE ARG PRG
Sbjct: 64 NGERVSVERARGTPRG 79
>gi|7637|emb|CAA44483.1| 52-kD bracketing protein [Drosophila melanogaster]
Length = 376
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRG 85
G R++VE ARG RG
Sbjct: 63 LGERVVVEPARGTARG 78
>gi|289740685|gb|ADD19090.1| serine-arginine protein 55 [Glossina morsitans morsitans]
Length = 351
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRG 85
G R++VE ARG RG
Sbjct: 63 LGERVVVEPARGTARG 78
>gi|312077156|ref|XP_003141179.1| hypothetical protein LOAG_05594 [Loa loa]
Length = 214
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 55/76 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVGRL+ R RD+E F YGRI ++ +K +AFVEFSD RDA+DA + LNGR +
Sbjct: 2 GSRVYVGRLSYRAHERDIERFFRGYGRITEILLKNGYAFVEFSDRRDAEDAVHDLNGRSL 61
Query: 70 DGSRIIVEFARGGPRG 85
G R+IV+ A+ PRG
Sbjct: 62 LGDRVIVQNAKSRPRG 77
>gi|78099805|sp|P26686.4|SRR55_DROME RecName: Full=Serine-arginine protein 55; Short=SRP55; AltName:
Full=52 kDa bracketing protein; AltName: Full=B52
protein; AltName: Full=Protein enhancer of deformed
Length = 376
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRG 85
G R++VE ARG RG
Sbjct: 63 LGERVVVEPARGTARG 78
>gi|402581590|gb|EJW75538.1| splicing factor, partial [Wuchereria bancrofti]
Length = 212
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 55/76 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVGRL+ R RD+E F YGRI ++ +K +AFVEFSD RDA+DA + LNGR +
Sbjct: 2 GSRVYVGRLSYRAHERDIERFFRGYGRITEILLKNGYAFVEFSDRRDAEDAVHDLNGRSL 61
Query: 70 DGSRIIVEFARGGPRG 85
G R+IV+ A+ PRG
Sbjct: 62 LGDRVIVQNAKSRPRG 77
>gi|194741292|ref|XP_001953123.1| GF17608 [Drosophila ananassae]
gi|190626182|gb|EDV41706.1| GF17608 [Drosophila ananassae]
Length = 350
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRG 85
G R++VE ARG RG
Sbjct: 63 LGERVVVEPARGTARG 78
>gi|28571689|ref|NP_788665.1| B52, isoform A [Drosophila melanogaster]
gi|28571699|ref|NP_788666.1| B52, isoform C [Drosophila melanogaster]
gi|386765710|ref|NP_788667.2| B52, isoform N [Drosophila melanogaster]
gi|21064205|gb|AAM29332.1| AT29232p [Drosophila melanogaster]
gi|23171192|gb|AAF54969.2| B52, isoform A [Drosophila melanogaster]
gi|23171193|gb|AAN13575.1| B52, isoform C [Drosophila melanogaster]
gi|25012274|gb|AAN71250.1| LD30815p [Drosophila melanogaster]
gi|27820026|gb|AAO25044.1| GM10155p [Drosophila melanogaster]
gi|220950988|gb|ACL88037.1| B52-PA [synthetic construct]
gi|220957884|gb|ACL91485.1| B52-PA [synthetic construct]
gi|383292690|gb|AAN13576.2| B52, isoform N [Drosophila melanogaster]
Length = 350
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRG 85
G R++VE ARG RG
Sbjct: 63 LGERVVVEPARGTARG 78
>gi|443724659|gb|ELU12563.1| hypothetical protein CAPTEDRAFT_175470 [Capitella teleta]
Length = 321
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 50/70 (71%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+YVGRL+ R RD+E F YGRI DV +K + FVEF D RDADDA Y LNG+++ G
Sbjct: 4 RIYVGRLSYSVRERDIERFFRNYGRIVDVLLKNGYGFVEFDDYRDADDAVYELNGKELCG 63
Query: 72 SRIIVEFARG 81
R+++E ARG
Sbjct: 64 ERVVIEHARG 73
>gi|195144342|ref|XP_002013155.1| GL23543 [Drosophila persimilis]
gi|194102098|gb|EDW24141.1| GL23543 [Drosophila persimilis]
Length = 358
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRG 85
G R++VE ARG RG
Sbjct: 63 LGERVVVEPARGTARG 78
>gi|270014159|gb|EFA10607.1| hypothetical protein TcasGA2_TC012868 [Tribolium castaneum]
Length = 424
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 52/76 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L T RDLE F YGR+RDV +K + FVEF D RDADDA Y LNG+ +
Sbjct: 3 GSRVYVGGLPYGTTERDLERFFRGYGRMRDVLIKNGYGFVEFDDHRDADDAVYELNGKKL 62
Query: 70 DGSRIIVEFARGGPRG 85
G R+ VE ARG PRG
Sbjct: 63 LGERVTVERARGTPRG 78
>gi|289739639|gb|ADD18567.1| arginine/serine-rich 6 splicing factor [Glossina morsitans
morsitans]
Length = 346
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRG 85
G R++VE ARG RG
Sbjct: 63 LGERVVVEPARGTARG 78
>gi|195113427|ref|XP_002001269.1| GI22065 [Drosophila mojavensis]
gi|193917863|gb|EDW16730.1| GI22065 [Drosophila mojavensis]
Length = 361
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRG 85
G R++VE ARG RG
Sbjct: 63 LGERVVVEPARGTARG 78
>gi|1049088|gb|AAA93073.1| SRp55-1 [Homo sapiens]
Length = 344
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 51/70 (72%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ +VD+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
+IVE ARG
Sbjct: 63 EHVIVEHARG 72
>gi|198452967|ref|XP_001359013.2| GA10599 [Drosophila pseudoobscura pseudoobscura]
gi|198132156|gb|EAL28156.2| GA10599 [Drosophila pseudoobscura pseudoobscura]
Length = 357
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRG 85
G R++VE ARG RG
Sbjct: 63 LGERVVVEPARGTARG 78
>gi|357621499|gb|EHJ73311.1| splicing factor arginine/serine-rich 6 [Danaus plexippus]
Length = 408
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE+ F +GRIRD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARG 81
G R++VE ARG
Sbjct: 63 LGERVVVEPARG 74
>gi|1049084|gb|AAA93071.1| SRp55-2 [Homo sapiens]
Length = 135
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 51/70 (72%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ +VD+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
+IVE ARG
Sbjct: 63 EHVIVEHARG 72
>gi|195451842|ref|XP_002073099.1| GK13948 [Drosophila willistoni]
gi|194169184|gb|EDW84085.1| GK13948 [Drosophila willistoni]
Length = 362
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRG 85
G R++VE ARG RG
Sbjct: 63 LGERVVVEPARGTARG 78
>gi|195036928|ref|XP_001989920.1| GH18528 [Drosophila grimshawi]
gi|193894116|gb|EDV92982.1| GH18528 [Drosophila grimshawi]
Length = 360
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRG 85
G R++VE ARG RG
Sbjct: 63 LGERVVVEPARGTARG 78
>gi|116284263|gb|AAI24193.1| Zgc:55809 protein [Danio rerio]
Length = 284
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+YVG+L+ R R +D+E F YG+I +VD+K + FVEF DPRDADDA Y LNG+D+
Sbjct: 2 SRVYVGKLSHRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKDLC 61
Query: 71 GSRIIVEF 78
G R+I EF
Sbjct: 62 GKRVI-EF 68
>gi|196007380|ref|XP_002113556.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190583960|gb|EDV24030.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 263
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 52/70 (74%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
TR+Y+GRL S R RD+E+ F YG++++V +K F FVEF D RDA+DA Y LN +++
Sbjct: 2 TRVYLGRLNSSVRERDVEKFFRDYGKLKEVTLKGTFGFVEFDDSRDAEDAVYDLNNKELC 61
Query: 71 GSRIIVEFAR 80
G RIIVEFAR
Sbjct: 62 GDRIIVEFAR 71
>gi|195390405|ref|XP_002053859.1| GJ24113 [Drosophila virilis]
gi|194151945|gb|EDW67379.1| GJ24113 [Drosophila virilis]
Length = 347
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRG 85
G R++VE ARG RG
Sbjct: 63 LGERVVVEPARGTARG 78
>gi|50540286|ref|NP_001002610.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
gi|49900455|gb|AAH75982.1| Splicing factor, arginine/serine-rich 5b [Danio rerio]
Length = 285
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 51/71 (71%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDA+DA Y L+G+++
Sbjct: 3 GCRIFIGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGKEL 62
Query: 70 DGSRIIVEFAR 80
R+ +E AR
Sbjct: 63 CNERVTIEHAR 73
>gi|78369222|ref|NP_001030349.1| serine/arginine-rich splicing factor 6 [Bos taurus]
gi|122145041|sp|Q3B7L6.1|SRSF6_BOVIN RecName: Full=Serine/arginine-rich splicing factor 6; AltName:
Full=Splicing factor, arginine/serine-rich 6
gi|77567850|gb|AAI07554.1| Splicing factor, arginine/serine-rich 6 [Bos taurus]
Length = 345
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 51/70 (72%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ +D+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLGIDLKNGYGFVEFEDSRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|428182228|gb|EKX51089.1| hypothetical protein GUITHDRAFT_161608 [Guillardia theta
CCMP2712]
Length = 258
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 60/85 (70%), Gaps = 4/85 (4%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+YVG L+SR R RDL++ FSR+G+IRD+ +K+ FAFVE+ DA+ A ++G +++G
Sbjct: 6 RVYVGHLSSRVRERDLDDEFSRFGKIRDISLKQGFAFVEYDHSEDAEYAVRKMDGVNLEG 65
Query: 72 SRIIVEFARG----GPRGPGGSREY 92
RI+VEFA+ GPRG G R Y
Sbjct: 66 MRILVEFAKETPKRGPRGGSGYRIY 90
>gi|52345470|ref|NP_001004783.1| serine/arginine-rich splicing factor 5 [Xenopus (Silurana)
tropicalis]
gi|49522053|gb|AAH74518.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
gi|89273344|emb|CAJ81460.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 272
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 51/71 (71%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVEFAR 80
R+ +E AR
Sbjct: 63 CNERVTIEHAR 73
>gi|427784005|gb|JAA57454.1| Putative alternative splicing factor [Rhipicephalus pulchellus]
Length = 181
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 66/110 (60%), Gaps = 7/110 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMK----RDFAFVEFSDPRDADDARYSLNGR 67
+L++GRL TR RD+E++F RYGR+ D+K +AFV++ D RDA+DA NGR
Sbjct: 6 QLFIGRLPLDTRERDVEQVFERYGRLLRCDVKYGTGMAYAFVDYEDHRDAEDAVKYENGR 65
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
++ G ++VE+ARG P ++ +G C+ C GHWARDC
Sbjct: 66 EIRGQSVVVEWARGPSFRPSAGKDRMG---YQSFDECYRCRRTGHWARDC 112
>gi|28571691|ref|NP_788668.1| B52, isoform B [Drosophila melanogaster]
gi|7299789|gb|AAF54968.1| B52, isoform B [Drosophila melanogaster]
Length = 329
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRG 85
G R++VE ARG RG
Sbjct: 63 LGERVVVEPARGTARG 78
>gi|440907568|gb|ELR57702.1| Serine/arginine-rich splicing factor 4, partial [Bos grunniens
mutus]
Length = 488
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 48/66 (72%)
Query: 16 GRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGSRII 75
GRL+ + R RD+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G R+I
Sbjct: 1 GRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVI 60
Query: 76 VEFARG 81
VE ARG
Sbjct: 61 VEHARG 66
>gi|74226809|dbj|BAE27050.1| unnamed protein product [Mus musculus]
Length = 339
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 51/70 (72%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ ++D+K + FVEF D RDADDA Y LN +++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNSKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|432936462|ref|XP_004082127.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Oryzias latipes]
Length = 272
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 53/71 (74%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+++GRL+ + R RD+E+ F YGRIR++++K F FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVFIGRLSPQARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFAR 80
R+ +E AR
Sbjct: 63 LSERVTIEHAR 73
>gi|320169407|gb|EFW46306.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 200
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 60/109 (55%), Gaps = 17/109 (15%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMK----RDFAFVEFSDPRDADDARYSLNGRD 68
L++GRL TR RDLE+IF YGR+ D+K F FVEF D RDA+DA NGR+
Sbjct: 3 LFIGRLDRDTRVRDLEDIFQPYGRLVRCDIKGGAVYSFGFVEFEDRRDAEDALNRENGRN 62
Query: 69 VDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
V G RI VE+A+G R S CF C GHWA+DC
Sbjct: 63 VRGVRIAVEWAKGQNRS-------------ADSDSCFRCNKPGHWAKDC 98
>gi|28571695|ref|NP_788670.1| B52, isoform F [Drosophila melanogaster]
gi|281361723|ref|NP_001163604.1| B52, isoform K [Drosophila melanogaster]
gi|23171196|gb|AAN13578.1| B52, isoform F [Drosophila melanogaster]
gi|272476966|gb|ACZ94901.1| B52, isoform K [Drosophila melanogaster]
Length = 147
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRG 85
G R++VE ARG RG
Sbjct: 63 LGERVVVEPARGTARG 78
>gi|112982956|ref|NP_001037676.1| splicing factor arginine/serine-rich 6 [Bombyx mori]
gi|109706819|gb|ABG42996.1| splicing factor arginine/serine-rich 6 [Bombyx mori]
Length = 306
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE+ F +GRIRD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARG 81
G R++VE ARG
Sbjct: 63 LGERVVVEPARG 74
>gi|15080592|gb|AAH12039.1| Splicing factor, arginine/serine-rich 6 [Mus musculus]
Length = 339
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 51/70 (72%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ ++D+K + FVEF D RDADDA Y LN +++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNSKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|410916817|ref|XP_003971883.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Takifugu
rubripes]
Length = 310
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 51/70 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL+ R +D+E F YGRIRD+D+K+ F FVEF DPRDA+DA Y L+G+++
Sbjct: 3 GCRIFIGRLSPTAREKDVERFFKGYGRIRDIDLKKGFGFVEFDDPRDAEDAVYELDGKEL 62
Query: 70 DGSRIIVEFA 79
R+ +E A
Sbjct: 63 CNERVTIEHA 72
>gi|56270156|gb|AAH87121.1| Splicing factor, arginine/serine-rich 6 [Rattus norvegicus]
Length = 339
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 51/70 (72%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ ++D+K + FVEF D RDADDA Y LN +++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNSKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|224967104|ref|NP_080775.3| arginine/serine-rich splicing factor 6 [Mus musculus]
gi|306922366|ref|NP_001014207.2| splicing factor, arginine/serine-rich 6 [Rattus norvegicus]
gi|74197209|dbj|BAE35148.1| unnamed protein product [Mus musculus]
gi|74228832|dbj|BAE21902.1| unnamed protein product [Mus musculus]
gi|148674361|gb|EDL06308.1| splicing factor, arginine/serine-rich 6 [Mus musculus]
gi|149043026|gb|EDL96600.1| similar to dJ862K6.2.2 (splicing factor, arginine/serine-rich 6
(SRP55-2)(isoform 2)), isoform CRA_a [Rattus
norvegicus]
Length = 339
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 51/70 (72%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ ++D+K + FVEF D RDADDA Y LN +++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNSKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|12836310|dbj|BAB23599.1| unnamed protein product [Mus musculus]
Length = 339
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 51/70 (72%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ ++D+K + FVEF D RDADDA Y LN +++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNSKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|28571693|ref|NP_788669.1| B52, isoform D [Drosophila melanogaster]
gi|281361721|ref|NP_001163603.1| B52, isoform I [Drosophila melanogaster]
gi|195329208|ref|XP_002031303.1| GM24118 [Drosophila sechellia]
gi|195571105|ref|XP_002103544.1| GD18917 [Drosophila simulans]
gi|23171195|gb|AAN13577.1| B52, isoform D [Drosophila melanogaster]
gi|194120246|gb|EDW42289.1| GM24118 [Drosophila sechellia]
gi|194199471|gb|EDX13047.1| GD18917 [Drosophila simulans]
gi|272476965|gb|ACZ94900.1| B52, isoform I [Drosophila melanogaster]
Length = 135
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRG 85
G R++VE ARG RG
Sbjct: 63 LGERVVVEPARGTARG 78
>gi|403168926|ref|XP_003328492.2| hypothetical protein PGTG_10451 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167725|gb|EFP84073.2| hypothetical protein PGTG_10451 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 485
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+++Y+G L TR DL++ FS+ GRI+++++K + FVE+ P+ A DA +
Sbjct: 111 SKIYIGGLPELTRPEDLQDCFSQLGRIKNIELKSGYGFVEYDSPQAACDAVSKYHEGTFL 170
Query: 71 GSRIIVEFARGG--PRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGD 121
GS+I VE + GG PR S C+ CGI GHWARDC D
Sbjct: 171 GSQIKVELSHGGSRPRHVAVSN---------NPEACYTCGIIGHWARDCPDAD 214
>gi|194901400|ref|XP_001980240.1| GG19772 [Drosophila erecta]
gi|195500858|ref|XP_002097554.1| GE26284 [Drosophila yakuba]
gi|190651943|gb|EDV49198.1| GG19772 [Drosophila erecta]
gi|194183655|gb|EDW97266.1| GE26284 [Drosophila yakuba]
Length = 135
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFARGGPRG 85
G R++VE ARG RG
Sbjct: 63 LGERVVVEPARGTARG 78
>gi|223648456|gb|ACN10986.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 315
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 51/71 (71%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL+ R RD+E+ F YGRIR+V++K F FVEF D RDADDA Y LNG+++
Sbjct: 3 GCRVFIGRLSPHARERDVEKFFKGYGRIREVNLKNGFGFVEFDDHRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFAR 80
R+ +E AR
Sbjct: 63 CSERVTIEHAR 73
>gi|148238297|ref|NP_001085381.1| serine/arginine-rich splicing factor 4 [Xenopus laevis]
gi|49257226|gb|AAH71160.1| MGC83263 protein [Xenopus laevis]
Length = 259
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 51/71 (71%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+++GRL+ R RD+E+ F YGRIR++++K F FVEF D RDADDA Y LNG+ +
Sbjct: 3 GSRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGKVL 62
Query: 70 DGSRIIVEFAR 80
R+ +E AR
Sbjct: 63 CNERVTIELAR 73
>gi|320168404|gb|EFW45303.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 239
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 51/74 (68%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
RLYVGR+++ R RD+E +F +YGR RDV +K F FVEF D RDADDA L+GRD
Sbjct: 2 ARLYVGRVSADARERDVEHLFGKYGRTRDVTLKNGFGFVEFDDVRDADDAMRDLHGRDFM 61
Query: 71 GSRIIVEFARGGPR 84
G R+IVE A G R
Sbjct: 62 GDRLIVERANSGGR 75
>gi|308510478|ref|XP_003117422.1| CRE-RSP-2 protein [Caenorhabditis remanei]
gi|308242336|gb|EFO86288.1| CRE-RSP-2 protein [Caenorhabditis remanei]
Length = 281
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 66/122 (54%), Gaps = 18/122 (14%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
R+Y+GRL +R RD+E F YG++ DV MK F FV+F D RDADDA + LNG+D+
Sbjct: 2 VRVYIGRLPNRATDRDVEHFFRGYGKLVDVIMKNGFGFVDFQDQRDADDAVHDLNGKDLC 61
Query: 71 GSRIIVEFAR-----------GGPRG------PGGSREYLGRGPPPGSGRCFNCGIDGHW 113
G R+I+EF R GG RG GG R++ R P S R F +D
Sbjct: 62 GERVILEFPRRKVGYNEERSGGGYRGREPTFRRGGERQFSNRYSRPCSTR-FRLVVDNLS 120
Query: 114 AR 115
R
Sbjct: 121 TR 122
>gi|66911687|gb|AAH97003.1| Sfrs5b protein [Danio rerio]
Length = 164
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 51/71 (71%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDA+DA Y L+G+++
Sbjct: 3 GCRIFIGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGKEL 62
Query: 70 DGSRIIVEFAR 80
R+ +E AR
Sbjct: 63 CNERVTIEHAR 73
>gi|328876417|gb|EGG24780.1| hypothetical protein DFA_03024 [Dictyostelium fasciculatum]
Length = 1023
Score = 83.6 bits (205), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/111 (43%), Positives = 67/111 (60%), Gaps = 8/111 (7%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+++YVG+LA R ++E+ FS+YGRI +V +K+ F FVEFSD ADDA S N
Sbjct: 2 SKIYVGQLAYDARQDEVEQFFSKYGRISEVQLKKGFCFVEFSDSSSADDAISSTNHTTFL 61
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGD 121
G I+VE + GP G+ + PG G+CFNC +GHWA++C D
Sbjct: 62 GKEILVEKSHAGP----GAIPFKN----PGEGKCFNCRQEGHWAKECPEKD 104
>gi|62089194|dbj|BAD93041.1| CS0DF038YO05 variant [Homo sapiens]
Length = 326
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%)
Query: 6 DRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLN 65
D G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+
Sbjct: 2 DIMSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELD 61
Query: 66 GRDVDGSRIIVE 77
G+++ R+ +E
Sbjct: 62 GKELCSERVTIE 73
>gi|198432077|ref|XP_002131581.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4
(Pre-mRNA-splicing factor SRP75) (SRP001LB) [Ciona
intestinalis]
Length = 332
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 50/75 (66%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R++VGRL+ R R D+E F +GRI D+++K F FVEF D RDADDA Y +N + +
Sbjct: 3 GRRIFVGRLSYRAREGDIERFFKGFGRITDINIKNGFCFVEFDDSRDADDAVYEMNNQML 62
Query: 70 DGSRIIVEFARGGPR 84
G R+ VE A+G R
Sbjct: 63 CGERVTVELAKGTQR 77
>gi|198422993|ref|XP_002121806.1| PREDICTED: zinc finger (CCHC)-24 isoform 1 [Ciona intestinalis]
Length = 230
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 68/123 (55%), Gaps = 16/123 (13%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
T++YVG L+S T DLE F YGR+ +V + + FA+VEF DPRDADDA L+G+
Sbjct: 5 TKIYVGNLSSSTTRGDLEYEFEYYGRLINVWVAKSPPGFAYVEFEDPRDADDAIKGLDGK 64
Query: 68 DVDGSRIIVEFARGGPRGPGGSRE-------------YLGRGPPPGSGRCFNCGIDGHWA 114
++ G RI VE + G PR G R+ R S RC+NCG GH+A
Sbjct: 65 ELHGRRIRVERSHGMPRNRGSDRDRPSFGGGRGGDGGGGSRRAFHPSDRCYNCGETGHYA 124
Query: 115 RDC 117
DC
Sbjct: 125 YDC 127
>gi|241671135|ref|XP_002399999.1| alternative splicing factor SRp20/9G8, putative [Ixodes scapularis]
gi|215506237|gb|EEC15731.1| alternative splicing factor SRp20/9G8, putative [Ixodes scapularis]
Length = 122
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 65/114 (57%), Gaps = 11/114 (9%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMK----RDFAFVEFSDPRDADDARYSLNGR 67
+L++GRL R RD+E++F RYGR+ D+K +AFV++ D RDA+DA NGR
Sbjct: 6 QLFIGRLPLECRERDVEQVFERYGRLLRCDVKYGTGMAYAFVDYEDHRDAEDAVKYENGR 65
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGD 121
++ G ++VE+ARG P ++ C+ C GHWARDC GD
Sbjct: 66 EIRGQSVVVEWARGPSFRPPAAK-------VSSFDECYRCRRTGHWARDCPEGD 112
>gi|348515953|ref|XP_003445504.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Oreochromis niloticus]
Length = 295
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 51/71 (71%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL+ R RD+E+ F YGRIR++++K F FVEF D RDADDA Y LNG+++
Sbjct: 3 GCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFAR 80
R+ +E AR
Sbjct: 63 CSERVTIEHAR 73
>gi|21749793|dbj|BAC03661.1| unnamed protein product [Homo sapiens]
Length = 137
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPRFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P + RC+ CG GH+A D
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRP-PARRPFDPNDRCYECGEKGHYAYD 118
Query: 117 CK 118
C
Sbjct: 119 CH 120
>gi|119620768|gb|EAX00363.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_a [Homo
sapiens]
gi|148706558|gb|EDL38505.1| mCG17902, isoform CRA_d [Mus musculus]
gi|149050600|gb|EDM02773.1| rCG61762, isoform CRA_b [Rattus norvegicus]
Length = 137
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 18/128 (14%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG------SGRCFNCGID 110
A+DA L+G+ + GSR+ VE + G PR R R PP + RC+ CG
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDR--PPARRPFDPNDRCYECGEK 112
Query: 111 GHWARDCK 118
GH+A DC
Sbjct: 113 GHYAYDCH 120
>gi|149043028|gb|EDL96602.1| similar to dJ862K6.2.2 (splicing factor, arginine/serine-rich 6
(SRP55-2)(isoform 2)), isoform CRA_c [Rattus
norvegicus]
Length = 95
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 51/70 (72%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ ++D+K + FVEF D RDADDA Y LN +++ G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNSKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|170596998|ref|XP_001902973.1| Hypothetical RNA-binding protein T28D9.2 in chromosome II,
putative [Brugia malayi]
gi|158589007|gb|EDP28178.1| Hypothetical RNA-binding protein T28D9.2 in chromosome II,
putative [Brugia malayi]
Length = 128
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 55/76 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVGRL+ R RD+E F YGRI ++ +K +AFVEFSD RDA+DA + LNGR +
Sbjct: 2 GSRVYVGRLSYRAHERDIERFFRGYGRITEILLKNGYAFVEFSDRRDAEDAVHDLNGRSL 61
Query: 70 DGSRIIVEFARGGPRG 85
G R+IV+ A+ PRG
Sbjct: 62 LGDRVIVQNAKSRPRG 77
>gi|148706565|gb|EDL38512.1| mCG17902, isoform CRA_k [Mus musculus]
Length = 165
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 18/128 (14%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 9 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 67
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG------SGRCFNCGID 110
A+DA L+G+ + GSR+ VE + G PR R R PP + RC+ CG
Sbjct: 68 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDR--PPARRPFDPNDRCYECGEK 120
Query: 111 GHWARDCK 118
GH+A DC
Sbjct: 121 GHYAYDCH 128
>gi|56797744|ref|NP_001008732.1| serine/arginine-rich splicing factor 6b [Danio rerio]
gi|56541079|gb|AAH86820.1| Splicing factor, arginine/serine-rich 6b [Danio rerio]
Length = 355
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 50/70 (71%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+G+L+ R +D++ F YG++ + D+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGKLSYHVREKDIQRFFGGYGKLMETDLKNGYGFVEFEDTRDADDAVYELNGKELCG 62
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 63 ERVIVEHARG 72
>gi|341888855|gb|EGT44790.1| CBN-RSP-2 protein [Caenorhabditis brenneri]
gi|341896980|gb|EGT52915.1| hypothetical protein CAEBREN_32319 [Caenorhabditis brenneri]
Length = 283
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 49/70 (70%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
R+Y+GRL +R RD+E F YG++ DV MK F FV+F D RDADDA + LNG+D+
Sbjct: 2 VRVYIGRLPNRATDRDVEHFFRGYGKLVDVIMKNGFGFVDFQDQRDADDAVHDLNGKDLC 61
Query: 71 GSRIIVEFAR 80
G R+I+EF R
Sbjct: 62 GERVILEFPR 71
>gi|20071765|gb|AAH27391.1| Sfrs7 protein [Mus musculus]
gi|148706560|gb|EDL38507.1| mCG17902, isoform CRA_f [Mus musculus]
Length = 157
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 18/128 (14%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG------SGRCFNCGID 110
A+DA L+G+ + GSR+ VE + G PR R R PP + RC+ CG
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDR--PPARRPFDPNDRCYECGEK 112
Query: 111 GHWARDCK 118
GH+A DC
Sbjct: 113 GHYAYDCH 120
>gi|26328639|dbj|BAC28058.1| unnamed protein product [Mus musculus]
Length = 157
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 18/128 (14%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG------SGRCFNCGID 110
A+DA L+G+ + GSR+ VE + G PR R R PP + RC+ CG
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDR--PPARRPFDPNDRCYECGEK 112
Query: 111 GHWARDCK 118
GH+A DC
Sbjct: 113 GHYAYDCH 120
>gi|25012246|gb|AAN71237.1| LD22171p, partial [Drosophila melanogaster]
Length = 187
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 51/76 (67%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+YVG L R RDLE F YGR RD+ +K + FVEF D RDADDA Y LNG+++
Sbjct: 1 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKELL 60
Query: 71 GSRIIVEFARGGPRGP 86
G R++VE ARG R P
Sbjct: 61 GERVVVEPARGTARDP 76
>gi|268531976|ref|XP_002631116.1| C. briggsae CBR-RSP-2 protein [Caenorhabditis briggsae]
Length = 279
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 65/117 (55%), Gaps = 18/117 (15%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
R+Y+GRL +R RD+E F YG++ DV MK F FV+F + RDADDA + LNG+D+
Sbjct: 2 VRVYIGRLPNRATDRDVEHFFRGYGKLSDVIMKNGFGFVDFQEQRDADDAVHDLNGKDLC 61
Query: 71 GSRIIVEFAR-----------GGPRG------PGGSREYLGRGPPPGSGRCFNCGID 110
G R+I+EF R GG RG GG R++ R P S R F ID
Sbjct: 62 GERVILEFPRRKVGYNEERSGGGFRGREPTFRRGGERQFSNRYSRPCSTR-FRLVID 117
>gi|68534386|gb|AAH99175.1| Splicing factor, arginine/serine-rich 7 [Rattus norvegicus]
gi|149050598|gb|EDM02771.1| rCG61762, isoform CRA_a [Rattus norvegicus]
gi|149050599|gb|EDM02772.1| rCG61762, isoform CRA_a [Rattus norvegicus]
Length = 157
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 18/128 (14%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG------SGRCFNCGID 110
A+DA L+G+ + GSR+ VE + G PR R R PP + RC+ CG
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDR--PPARRPFDPNDRCYECGEK 112
Query: 111 GHWARDCK 118
GH+A DC
Sbjct: 113 GHYAYDCH 120
>gi|93003218|tpd|FAA00192.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 238
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 68/123 (55%), Gaps = 16/123 (13%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
T++YVG L+S T DLE F YGR+ +V + + FA+VEF DPRDADDA L+G+
Sbjct: 13 TKIYVGNLSSSTTRGDLEYEFEYYGRLINVWVAKSPPGFAYVEFEDPRDADDAIKGLDGK 72
Query: 68 DVDGSRIIVEFARGGPRGPGGSRE-------------YLGRGPPPGSGRCFNCGIDGHWA 114
++ G RI VE + G PR G R+ R S RC+NCG GH+A
Sbjct: 73 ELHGRRIRVERSHGMPRNRGSDRDRPSFGGGRGGDGGGGSRRAFHPSDRCYNCGETGHYA 132
Query: 115 RDC 117
DC
Sbjct: 133 YDC 135
>gi|2435503|gb|AAC39946.1| HRS [Mus musculus]
Length = 270
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|449502441|ref|XP_002200515.2| PREDICTED: serine/arginine-rich splicing factor 4-like
[Taeniopygia guttata]
Length = 277
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R++VG L+SR R RD+E+ F YGRIR++ +K F FVEF D RDADDA Y LNG+++
Sbjct: 3 GCRVFVGHLSSRARERDVEKFFKGYGRIREIHLKNGFGFVEFEDHRDADDAIYELNGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CDERVTIE 70
>gi|307133720|ref|NP_001182516.1| splicing factor, arginine/serine-rich 5 [Equus caballus]
Length = 271
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|147907282|ref|NP_001079543.1| keratin 5, gene 1 b [Xenopus laevis]
gi|28278124|gb|AAH44085.1| MGC52712 protein [Xenopus laevis]
Length = 261
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 50/71 (70%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL+ R RD+E+ F YGRIR++++K F FVEF D RDADDA Y LNG+ +
Sbjct: 3 GCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGKVL 62
Query: 70 DGSRIIVEFAR 80
R+ +E AR
Sbjct: 63 CSERVTIEHAR 73
>gi|449274709|gb|EMC83787.1| Splicing factor, arginine/serine-rich 4, partial [Columba livia]
Length = 257
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R++VG L+SR R RD+E+ F YGRIR++ +K F FVEF D RDADDA Y LNG+++
Sbjct: 3 GCRVFVGHLSSRARERDVEKFFKGYGRIREIHLKNGFGFVEFEDHRDADDAIYELNGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CDERVTIE 70
>gi|17535711|ref|NP_496442.1| Protein RSP-1, isoform a [Caenorhabditis elegans]
gi|56749460|sp|Q23121.1|RSP1_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 1;
AltName: Full=CeSRp75; AltName: Full=RNA-binding
protein srp-5
gi|3880429|emb|CAA91395.1| Protein RSP-1, isoform a [Caenorhabditis elegans]
Length = 312
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 51/71 (71%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
R+Y+GRL SR +D+E F YG+IRDV +K F FVEF D RDA+DA + LNG+++
Sbjct: 2 AARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKEL 61
Query: 70 DGSRIIVEFAR 80
G R+I+++++
Sbjct: 62 GGERVILDYSK 72
>gi|449502419|ref|XP_004174507.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Taeniopygia guttata]
Length = 265
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|327281934|ref|XP_003225700.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Anolis
carolinensis]
Length = 266
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|224051266|ref|XP_002200500.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Taeniopygia guttata]
Length = 264
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|335307313|ref|XP_003360793.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Sus
scrofa]
Length = 221
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|442763085|gb|JAA73701.1| Putative alternative splicing factor, partial [Ixodes ricinus]
Length = 191
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 11/114 (9%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMK----RDFAFVEFSDPRDADDARYSLNGR 67
+L++GRL R RD+E++F RYGR D+K +AFV++ D RDA+DA NGR
Sbjct: 6 QLFIGRLPLECRERDVEQVFERYGRFLRCDVKYGTGMAYAFVDYEDHRDAEDAVKYENGR 65
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGD 121
++ G ++VE+ARG P ++ C+ C GHWARDC GD
Sbjct: 66 EIRGQSVVVEWARGPSFRPPAAK-------VSSFDECYRCRRTGHWARDCPEGD 112
>gi|307133730|ref|NP_001182521.1| splicing factor, arginine/serine-rich 5 [Pongo abelii]
gi|109084084|ref|XP_001109903.1| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 2
[Macaca mulatta]
gi|297298154|ref|XP_001110094.2| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 3
[Macaca mulatta]
gi|297298156|ref|XP_001110146.2| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 4
[Macaca mulatta]
gi|119601409|gb|EAW81003.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Homo
sapiens]
Length = 271
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|149643059|ref|NP_001092399.1| serine/arginine-rich splicing factor 5 [Bos taurus]
gi|73963391|ref|XP_867135.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 9
[Canis lupus familiaris]
gi|301763317|ref|XP_002917076.1| PREDICTED: splicing factor, arginine/serine-rich 5-like
[Ailuropoda melanoleuca]
gi|345803610|ref|XP_867196.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 15
[Canis lupus familiaris]
gi|410962543|ref|XP_003987828.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Felis catus]
gi|410962545|ref|XP_003987829.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Felis catus]
gi|410962547|ref|XP_003987830.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 3
[Felis catus]
gi|148878097|gb|AAI46186.1| SFRS5 protein [Bos taurus]
gi|281349392|gb|EFB24976.1| hypothetical protein PANDA_005250 [Ailuropoda melanoleuca]
gi|296482956|tpg|DAA25071.1| TPA: splicing factor, arginine/serine-rich 5 [Bos taurus]
gi|440897364|gb|ELR49075.1| Serine/arginine-rich splicing factor 5 [Bos grunniens mutus]
Length = 272
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|86991438|ref|NP_001034554.1| serine/arginine-rich splicing factor 5 [Homo sapiens]
gi|86991440|ref|NP_008856.2| serine/arginine-rich splicing factor 5 [Homo sapiens]
gi|296215383|ref|XP_002754098.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Callithrix jacchus]
gi|332229001|ref|XP_003263676.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Nomascus leucogenys]
gi|332229003|ref|XP_003263677.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Nomascus leucogenys]
gi|332842591|ref|XP_510034.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 6 [Pan
troglodytes]
gi|332842593|ref|XP_001143701.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Pan
troglodytes]
gi|390469250|ref|XP_002754097.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Callithrix jacchus]
gi|397507326|ref|XP_003824150.1| PREDICTED: serine/arginine-rich splicing factor 5 [Pan paniscus]
gi|403264529|ref|XP_003924530.1| PREDICTED: serine/arginine-rich splicing factor 5 [Saimiri
boliviensis boliviensis]
gi|426377318|ref|XP_004055414.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Gorilla gorilla gorilla]
gi|426377320|ref|XP_004055415.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Gorilla gorilla gorilla]
gi|3929378|sp|Q13243.1|SRSF5_HUMAN RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|1049080|gb|AAA93070.1| SRp40-1 [Homo sapiens]
gi|17511888|gb|AAH18823.1| Splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|30583017|gb|AAP35752.1| splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|61362109|gb|AAX42162.1| splicing factor arginine/serine-rich 5 [synthetic construct]
gi|61362114|gb|AAX42163.1| splicing factor arginine/serine-rich 5 [synthetic construct]
gi|71297198|gb|AAH40209.1| Splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|90075796|dbj|BAE87578.1| unnamed protein product [Macaca fascicularis]
gi|119601408|gb|EAW81002.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|119601411|gb|EAW81005.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|119601412|gb|EAW81006.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|208967490|dbj|BAG73759.1| splicing factor, arginine/serine-rich 5 [synthetic construct]
gi|355693393|gb|EHH27996.1| hypothetical protein EGK_18328 [Macaca mulatta]
gi|355778697|gb|EHH63733.1| hypothetical protein EGM_16760 [Macaca fascicularis]
gi|380815560|gb|AFE79654.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|380815562|gb|AFE79655.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|380815564|gb|AFE79656.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420727|gb|AFH33577.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420729|gb|AFH33578.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420731|gb|AFH33579.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|410218428|gb|JAA06433.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410218430|gb|JAA06434.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410252412|gb|JAA14173.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410252414|gb|JAA14174.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410303912|gb|JAA30556.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410303914|gb|JAA30557.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410357772|gb|JAA44585.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410357774|gb|JAA44586.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410358000|gb|JAA44587.1| splicing factor, arginine/serine-rich 5 [Pan troglodytes]
Length = 272
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|119226243|ref|NP_001073162.1| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|119226245|ref|NP_033185.2| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|119226247|ref|NP_001073163.1| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|158631248|ref|NP_062130.2| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|306774128|ref|NP_001182434.1| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|306774130|ref|NP_001182435.1| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|354472150|ref|XP_003498303.1| PREDICTED: serine/arginine-rich splicing factor 5-like
[Cricetulus griseus]
gi|1168968|sp|Q09167.1|SRSF5_RAT RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Insulin-induced growth response protein CL-4;
AltName: Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|410516929|sp|O35326.2|SRSF5_MOUSE RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|349079|gb|AAA62266.1| growth response protein [Rattus norvegicus]
gi|34849628|gb|AAH58479.1| Sfrs5 protein [Rattus norvegicus]
gi|52139013|gb|AAH82593.1| Splicing factor, arginine/serine-rich 5 (SRp40, HRS) [Mus
musculus]
gi|74144656|dbj|BAE27313.1| unnamed protein product [Mus musculus]
gi|148670738|gb|EDL02685.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670740|gb|EDL02687.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670743|gb|EDL02690.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670745|gb|EDL02692.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670746|gb|EDL02693.1| mCG7614, isoform CRA_a [Mus musculus]
gi|149025034|gb|EDL81401.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Rattus
norvegicus]
gi|149025037|gb|EDL81404.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Rattus
norvegicus]
gi|344235744|gb|EGV91847.1| Splicing factor, arginine/serine-rich 5 [Cricetulus griseus]
Length = 269
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|335292735|ref|XP_001927454.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1 [Sus
scrofa]
gi|335292737|ref|XP_001927469.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Sus
scrofa]
Length = 272
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|160333128|ref|NP_001026368.2| splicing factor, arginine/serine-rich 5 [Gallus gallus]
Length = 264
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|12841460|dbj|BAB25217.1| unnamed protein product [Mus musculus]
gi|148670741|gb|EDL02688.1| mCG7614, isoform CRA_c [Mus musculus]
gi|148670742|gb|EDL02689.1| mCG7614, isoform CRA_c [Mus musculus]
gi|148670747|gb|EDL02694.1| mCG7614, isoform CRA_c [Mus musculus]
Length = 270
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|402876562|ref|XP_003902030.1| PREDICTED: serine/arginine-rich splicing factor 5 [Papio anubis]
Length = 272
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|54020785|ref|NP_001005638.1| keratin 5, gene 1 [Xenopus (Silurana) tropicalis]
gi|49250524|gb|AAH74634.1| keratin 5, gene 1 [Xenopus (Silurana) tropicalis]
Length = 262
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 50/71 (70%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL+ R RD+E+ F YGRIR++++K F FVEF D RDADDA Y LNG+ +
Sbjct: 3 GCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGKVL 62
Query: 70 DGSRIIVEFAR 80
R+ +E AR
Sbjct: 63 CNERVTIEHAR 73
>gi|432107111|gb|ELK32534.1| Serine/arginine-rich splicing factor 5 [Myotis davidii]
Length = 280
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|351708666|gb|EHB11585.1| Splicing factor, arginine/serine-rich 5 [Heterocephalus glaber]
Length = 270
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|348573304|ref|XP_003472431.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Cavia
porcellus]
Length = 273
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|291410875|ref|XP_002721708.1| PREDICTED: splicing factor, arginine/serine-rich 5 [Oryctolagus
cuniculus]
Length = 275
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|395504171|ref|XP_003756430.1| PREDICTED: serine/arginine-rich splicing factor 5 [Sarcophilus
harrisii]
Length = 266
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|308509716|ref|XP_003117041.1| CRE-RSP-1 protein [Caenorhabditis remanei]
gi|308241955|gb|EFO85907.1| CRE-RSP-1 protein [Caenorhabditis remanei]
Length = 308
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 51/71 (71%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
R+Y+GRL SR +D+E F YG+IRDV +K F FVEF D RDA+DA + LNG+++
Sbjct: 2 AARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKEL 61
Query: 70 DGSRIIVEFAR 80
G R+I+++++
Sbjct: 62 GGERVILDYSK 72
>gi|126282694|ref|XP_001370225.1| PREDICTED: serine/arginine-rich splicing factor 5-like
[Monodelphis domestica]
Length = 265
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|89273959|emb|CAJ82241.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 261
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 50/71 (70%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL+ R RD+E+ F YGRIR++++K F FVEF D RDADDA Y LNG+ +
Sbjct: 3 GCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGKVL 62
Query: 70 DGSRIIVEFAR 80
R+ +E AR
Sbjct: 63 CNERVTIEHAR 73
>gi|310772202|ref|NP_001006476.2| serine/arginine-rich splicing factor 5a [Gallus gallus]
gi|326920574|ref|XP_003206544.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 278
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R++VG L+SR R RD+E+ F YGRIR++ +K F FVEF D RDADDA Y LNG+++
Sbjct: 3 GCRVFVGHLSSRARERDVEKFFKGYGRIREIHLKNGFGFVEFEDHRDADDAIYELNGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CDERVTIE 70
>gi|341889018|gb|EGT44953.1| hypothetical protein CAEBREN_15444 [Caenorhabditis brenneri]
gi|341896973|gb|EGT52908.1| hypothetical protein CAEBREN_18115 [Caenorhabditis brenneri]
Length = 305
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 50/71 (70%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
R+Y+GRL SR +D+E F YG IRDV +K F FVEF D RDA+DA + LNG+++
Sbjct: 2 AARIYIGRLTSRVSEKDIEHFFRGYGNIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKEL 61
Query: 70 DGSRIIVEFAR 80
G R+I+++++
Sbjct: 62 GGERVILDYSK 72
>gi|119620769|gb|EAX00364.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_b [Homo
sapiens]
Length = 132
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 18/128 (14%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG------SGRCFNCGID 110
A+DA L+G+ + GSR+ VE + G PR R R PP + RC+ CG
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDR--PPARRPFDPNDRCYECGEK 112
Query: 111 GHWARDCK 118
GH+A DC
Sbjct: 113 GHYAYDCH 120
>gi|268531974|ref|XP_002631115.1| C. briggsae CBR-RSP-1 protein [Caenorhabditis briggsae]
Length = 304
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 51/71 (71%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
R+Y+GRL SR +D+E F YG+IRDV +K F FVEF D RDA+DA + LNG+++
Sbjct: 2 AARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKEL 61
Query: 70 DGSRIIVEFAR 80
G R+I+++++
Sbjct: 62 GGDRVILDYSK 72
>gi|157110209|ref|XP_001651001.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108883952|gb|EAT48177.1| AAEL000769-PA [Aedes aegypti]
Length = 247
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 54/80 (67%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+Y G+L TR RDLE F +GRIR++ ++R +AFVEF D RDA+DA Y LNG +
Sbjct: 2 GSRVYAGKLPHDTRERDLERFFEGFGRIREILLRRGYAFVEFDDYRDAEDAIYELNGAKL 61
Query: 70 DGSRIIVEFARGGPRGPGGS 89
G RI+VE + PR G S
Sbjct: 62 LGQRIVVEATKRPPRFGGSS 81
>gi|417398268|gb|JAA46167.1| Putative serine/arginine-rich splicing factor 5 [Desmodus
rotundus]
Length = 278
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|47224367|emb|CAG09213.1| unnamed protein product [Tetraodon nigroviridis]
Length = 151
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 51/70 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL+ R +D+E F YGRIRD+D+K+ F FVEF DPRDA+DA Y L+G+++
Sbjct: 3 GCRIFIGRLSPTAREKDVERFFKGYGRIRDIDLKKGFGFVEFDDPRDAEDAVYELDGKEL 62
Query: 70 DGSRIIVEFA 79
R+ +E A
Sbjct: 63 CNERVTIEHA 72
>gi|30583835|gb|AAP36166.1| Homo sapiens splicing factor, arginine/serine-rich 5 [synthetic
construct]
gi|60653861|gb|AAX29623.1| splicing factor arginine/serine-rich 5 [synthetic construct]
Length = 273
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|395849594|ref|XP_003797407.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Otolemur garnettii]
gi|395849596|ref|XP_003797408.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Otolemur garnettii]
Length = 270
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|410897813|ref|XP_003962393.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Takifugu
rubripes]
Length = 288
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 50/71 (70%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++G L+ R RD+E+ F YGRIR++++K F FVEF D RDADDA Y LNG+++
Sbjct: 3 GCRVFIGHLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFAR 80
R+ +E AR
Sbjct: 63 CSERVTIEHAR 73
>gi|431904517|gb|ELK09900.1| Splicing factor, arginine/serine-rich 5 [Pteropus alecto]
Length = 223
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|53130660|emb|CAG31659.1| hypothetical protein RCJMB04_9e4 [Gallus gallus]
Length = 165
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R++VG L+SR R RD+E+ F YGRIR++ +K F FVEF D RDADDA Y LNG+++
Sbjct: 3 GCRVFVGHLSSRARERDVEKFFKGYGRIREIHLKNGFGFVEFEDHRDADDAIYELNGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CDERVTIE 70
>gi|170284968|gb|AAI61144.1| Unknown (protein for MGC:185314) [Xenopus (Silurana) tropicalis]
Length = 91
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 51/70 (72%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R R RD+E F +G+I +VD+K + FVEF D RDA+DA Y +NGR++ G
Sbjct: 3 RVYIGRLSHRARERDVERFFKGFGKIVEVDLKNGYGFVEFEDSRDAEDAVYEMNGRELCG 62
Query: 72 SRIIVEFARG 81
R+IVE AR
Sbjct: 63 ERVIVEHARA 72
>gi|340378226|ref|XP_003387629.1| PREDICTED: serine/arginine-rich splicing factor 4-like
[Amphimedon queenslandica]
Length = 309
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 6/79 (7%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
M RY +R+Y+GRL + R +D+E F +GRIRD+++K F FVEF D RDA+DA
Sbjct: 1 MSRY------SRIYIGRLPYQAREKDVERFFRGFGRIRDINLKNGFGFVEFDDYRDAEDA 54
Query: 61 RYSLNGRDVDGSRIIVEFA 79
Y L+GR++ G R+IVE A
Sbjct: 55 VYELHGRELLGERVIVEHA 73
>gi|327280352|ref|XP_003224916.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Anolis
carolinensis]
Length = 261
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R++VGRL+ R RD+E+ F YGRIR++++K F FVEF D RDADDA Y LNG+++
Sbjct: 3 GCRVFVGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFEDHRDADDAVYELNGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CNERVTIE 70
>gi|193636560|ref|XP_001952396.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Acyrthosiphon pisum]
gi|328724544|ref|XP_003248180.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Acyrthosiphon pisum]
Length = 181
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L S +DLE+ FS YG IR+V + R+ FAFVEF DPRDA+DA L+GR
Sbjct: 15 CKIYVGDLGSSASKQDLEDAFSYYGSIRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGR 74
Query: 68 DVDGSRIIVEFARGGPR-GPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCK 118
+ G R+ VE + G R G P +C+ CG GH+ARDC+
Sbjct: 75 SICGRRVRVELSNAGSRKGAYRGGPPRRGRPFHPEDKCYECGDRGHYARDCR 126
>gi|449274700|gb|EMC83778.1| Splicing factor, arginine/serine-rich 5 [Columba livia]
Length = 265
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|119601416|gb|EAW81010.1| splicing factor, arginine/serine-rich 5, isoform CRA_e [Homo
sapiens]
Length = 209
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|45120092|ref|NP_957161.1| serine/arginine-rich splicing factor 5a [Danio rerio]
gi|37681945|gb|AAQ97850.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
Length = 259
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL+ R RD+E+ F YGRIR++++K F FVEF D RDADDA Y LNG+++
Sbjct: 3 GCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFA 79
R+ +E A
Sbjct: 63 CSERVTIEHA 72
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVD---MKRDFAFVEFSDPRDADDARYSLNGRD 68
R+ V L+SR +DL+++ + G + VD K++ VEF+ D +A L+G D
Sbjct: 114 RIIVENLSSRISWQDLKDLMRKVGEVTFVDAHRTKKNEGVVEFASHSDMKNAIEKLDGTD 173
Query: 69 VDGSRI 74
++G ++
Sbjct: 174 LNGRKL 179
>gi|194373907|dbj|BAG62266.1| unnamed protein product [Homo sapiens]
Length = 138
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|225718298|gb|ACO14995.1| Splicing factor, arginine/serine-rich 4 [Caligus clemensi]
Length = 234
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 56/79 (70%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
RLY+G ++ TR RD+E+ F YG++R++ +K + FVEF D RDADDA L+G+D++G
Sbjct: 7 RLYLGNVSDETRERDVEKFFKGYGKLREIALKNGYGFVEFEDHRDADDAVQDLDGKDMNG 66
Query: 72 SRIIVEFARGGPRGPGGSR 90
SR+ VEFAR GGSR
Sbjct: 67 SRVRVEFARSPRDKRGGSR 85
>gi|149025035|gb|EDL81402.1| splicing factor, arginine/serine-rich 5, isoform CRA_c [Rattus
norvegicus]
gi|149025038|gb|EDL81405.1| splicing factor, arginine/serine-rich 5, isoform CRA_c [Rattus
norvegicus]
Length = 138
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|260790117|ref|XP_002590090.1| hypothetical protein BRAFLDRAFT_83361 [Branchiostoma floridae]
gi|229275278|gb|EEN46101.1| hypothetical protein BRAFLDRAFT_83361 [Branchiostoma floridae]
Length = 326
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 64/109 (58%), Gaps = 13/109 (11%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
T+LYVG + R +DL+++F ++G++ + D+ +++ FV + +DA+DA +L +
Sbjct: 21 TKLYVGNVPQPARKKDLQDLFEKFGKVNECDIIKNYGFVHMDNEQDANDAIKALTNTEWM 80
Query: 71 GSRIIVEFARGGPRG-PG-GSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
G+RI VE ++ R PG GSR G C+ CG GHW+RDC
Sbjct: 81 GTRITVEMSKSKVRTQPGQGSR-----------GECYRCGKMGHWSRDC 118
>gi|17535713|ref|NP_496441.1| Protein RSP-2 [Caenorhabditis elegans]
gi|56749459|sp|Q23120.1|RSP2_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 2;
AltName: Full=CeSRp40; AltName: Full=RNA-binding protein
srp-4
gi|3880428|emb|CAA91394.1| Protein RSP-2 [Caenorhabditis elegans]
Length = 281
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 65/122 (53%), Gaps = 18/122 (14%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
R+Y+GRL +R RD+E F YG++ DV MK F FV+F D RDADDA + LNG+++
Sbjct: 2 VRVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELC 61
Query: 71 GSRIIVEFAR-----------GGPRG------PGGSREYLGRGPPPGSGRCFNCGIDGHW 113
G R+I+EF R G RG GG R++ R P S R F ID
Sbjct: 62 GERVILEFPRRKVGYNEERSGSGFRGREPTFRKGGERQFSNRYSRPCSTR-FRLVIDNLS 120
Query: 114 AR 115
R
Sbjct: 121 TR 122
>gi|55153889|gb|AAH85267.1| Sfrs5 protein [Mus musculus]
gi|194382214|dbj|BAG58862.1| unnamed protein product [Homo sapiens]
Length = 124
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|344273957|ref|XP_003408785.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Loxodonta
africana]
Length = 271
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRI+D+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIKDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|256077394|ref|XP_002574990.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229592|emb|CCD75763.1| putative arginine/serine-rich splicing factor [Schistosoma
mansoni]
Length = 371
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 51/73 (69%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+YVGR+ R RD+E F YGR+RD+ +K + FVEF + +DADDA Y L+GRD+
Sbjct: 2 SRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKNGYGFVEFDNEKDADDAVYDLHGRDLR 61
Query: 71 GSRIIVEFARGGP 83
G R+IVE AR P
Sbjct: 62 GERLIVEHARLPP 74
>gi|256077392|ref|XP_002574989.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229591|emb|CCD75762.1| putative arginine/serine-rich splicing factor [Schistosoma
mansoni]
Length = 370
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 51/73 (69%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+YVGR+ R RD+E F YGR+RD+ +K + FVEF + +DADDA Y L+GRD+
Sbjct: 2 SRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKNGYGFVEFDNEKDADDAVYDLHGRDLR 61
Query: 71 GSRIIVEFARGGP 83
G R+IVE AR P
Sbjct: 62 GERLIVEHARLPP 74
>gi|226467225|emb|CAX76093.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 51/73 (69%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+YVGR+ R RD+E F YGR+RD+ +K + FVEF + +DADDA Y L+GRD+
Sbjct: 2 SRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKNGYGFVEFDNEKDADDAVYDLHGRDLR 61
Query: 71 GSRIIVEFARGGP 83
G R+IVE AR P
Sbjct: 62 GERLIVEHARLPP 74
>gi|226467219|emb|CAX76090.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 51/73 (69%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+YVGR+ R RD+E F YGR+RD+ +K + FVEF + +DADDA Y L+GRD+
Sbjct: 2 SRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKNGYGFVEFDNEKDADDAVYDLHGRDLR 61
Query: 71 GSRIIVEFARGGP 83
G R+IVE AR P
Sbjct: 62 GERLIVEHARLPP 74
>gi|226467221|emb|CAX76091.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 51/73 (69%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+YVGR+ R RD+E F YGR+RD+ +K + FVEF + +DADDA Y L+GRD+
Sbjct: 2 SRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKNGYGFVEFDNEKDADDAVYDLHGRDLR 61
Query: 71 GSRIIVEFARGGP 83
G R+IVE AR P
Sbjct: 62 GERLIVEHARLPP 74
>gi|226467223|emb|CAX76092.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 51/73 (69%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+YVGR+ R RD+E F YGR+RD+ +K + FVEF + +DADDA Y L+GRD+
Sbjct: 2 SRVYVGRIPPRCTERDIERFFKGYGRLRDIVLKNGYGFVEFDNEKDADDAVYDLHGRDLR 61
Query: 71 GSRIIVEFARGGP 83
G R+IVE AR P
Sbjct: 62 GERLIVEHARLPP 74
>gi|53130016|emb|CAG31434.1| hypothetical protein RCJMB04_6g11 [Gallus gallus]
Length = 123
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|47221305|emb|CAG13241.1| unnamed protein product [Tetraodon nigroviridis]
Length = 315
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 49/70 (70%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++G L+ R RD+E+ F YGRIR++++K F FVEF D RDADDA Y LNG+++
Sbjct: 3 GCRVFIGHLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFA 79
R+ +E A
Sbjct: 63 CSERVTIEHA 72
>gi|427777525|gb|JAA54214.1| Putative alternative splicing factor asf/sf2 [Rhipicephalus
pulchellus]
Length = 333
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 50/77 (64%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
TR++VGRL R RDLE F YGRI D+ +K F FV+ SD RDA+DA LNG+ +
Sbjct: 2 ATRVFVGRLNYDVRERDLERFFRGYGRIEDIVLKNGFGFVDISDYRDAEDAVRDLNGKRL 61
Query: 70 DGSRIIVEFARGGPRGP 86
G R+ VE ARG RGP
Sbjct: 62 MGERVTVELARGMRRGP 78
>gi|427777529|gb|JAA54216.1| Putative alternative splicing factor asf/sf2 [Rhipicephalus
pulchellus]
Length = 308
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 50/77 (64%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
TR++VGRL R RDLE F YGRI D+ +K F FV+ SD RDA+DA LNG+ +
Sbjct: 2 ATRVFVGRLNYDVRERDLERFFRGYGRIEDIVLKNGFGFVDISDYRDAEDAVRDLNGKRL 61
Query: 70 DGSRIIVEFARGGPRGP 86
G R+ VE ARG RGP
Sbjct: 62 MGERVTVELARGMRRGP 78
>gi|225714068|gb|ACO12880.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
gi|290462833|gb|ADD24464.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 233
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 52/69 (75%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
RLY+G ++ TR RD+E+ F YG++R+V +K + FVEF D RDADDA L+G+D++G
Sbjct: 7 RLYLGNISDDTRERDVEKFFKGYGKLREVALKNGYGFVEFEDHRDADDAVQDLDGKDMNG 66
Query: 72 SRIIVEFAR 80
SR+ VEFAR
Sbjct: 67 SRVRVEFAR 75
>gi|1049082|gb|AAB60405.1| SRp40-3 [Homo sapiens]
gi|1049090|gb|AAA93074.1| SRp40-2 [Homo sapiens]
gi|34364611|emb|CAE45711.1| hypothetical protein [Homo sapiens]
gi|49457330|emb|CAG46964.1| SFRS5 [Homo sapiens]
gi|49457360|emb|CAG46979.1| SFRS5 [Homo sapiens]
gi|189053126|dbj|BAG34748.1| unnamed protein product [Homo sapiens]
gi|197692201|dbj|BAG70064.1| splicing factor arginine/serine-rich 5 [Homo sapiens]
Length = 107
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|2460180|gb|AAB71864.1| RNA binding protein [Rattus norvegicus]
Length = 124
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTME 70
>gi|449550622|gb|EMD41586.1| hypothetical protein CERSUDRAFT_61576 [Ceriporiopsis subvermispora
B]
Length = 508
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
++Y+G L TR DLE F + G I ++++K + FVEF +P A+++ N G
Sbjct: 90 KVYIGGLPEHTRKEDLESCFGKIGNIVNIELKVGYGFVEFDNPEAAEESVAKYNEGYFMG 149
Query: 72 SRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
++I VE +RGG G + +Y G G CF CG GHWAR+C
Sbjct: 150 NKIRVEPSRGG----GRTAKYNGD-----PGACFKCGQMGHWAREC 186
>gi|225713170|gb|ACO12431.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 129
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 52/69 (75%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
RLY+G ++ TR RD+E+ F YG++R+V +K + FVEF D RDADDA L+G+D++G
Sbjct: 7 RLYLGNISDDTRERDVEKFFKGYGKLREVALKNGYGFVEFEDHRDADDAVQDLDGKDMNG 66
Query: 72 SRIIVEFAR 80
SR+ VEFAR
Sbjct: 67 SRVRVEFAR 75
>gi|341892188|gb|EGT48123.1| CBN-RSP-5 protein [Caenorhabditis brenneri]
gi|341901487|gb|EGT57422.1| hypothetical protein CAEBREN_20510 [Caenorhabditis brenneri]
Length = 204
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
RLY+G++ R RD+E YGRI ++ MK FAFV+F D RDA+DA + L+GR +DG
Sbjct: 3 RLYLGKIPYNARERDIERFLKGYGRITNISMKYGFAFVDFEDSRDAEDACHDLDGRTMDG 62
Query: 72 S--RIIVEFARGGPRG 85
S R++V+ ARG PRG
Sbjct: 63 SSMRVVVQMARGRPRG 78
>gi|149053805|gb|EDM05622.1| rCG34610, isoform CRA_a [Rattus norvegicus]
Length = 214
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 5/87 (5%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEFARGGPRGPGGSREYL 93
D DG R+ VEF R G P GS + L
Sbjct: 77 YDYDGYRLRVEFPRSGRLPPSGSWQDL 103
>gi|346468811|gb|AEO34250.1| hypothetical protein [Amblyomma maculatum]
Length = 161
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 79/153 (51%), Gaps = 25/153 (16%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LEE F YG +R+V + R FAFVEF D RDA DA +L+G+
Sbjct: 21 CKVYVGELGNSGTKHELEEAFGYYGPLRNVWVARSPPGFAFVEFEDARDARDAVRALDGK 80
Query: 68 DVDGSRIIVEFARGGPRGP--GGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNK 125
+ G R+ VE + G R G SR P + RC++CG GH+ARDC+
Sbjct: 81 MLCGRRVRVELSTGKSRNSYRGSSR------PFQPTDRCYDCGERGHYARDCRV------ 128
Query: 126 CYRCGERGHIERNCQNSPKKLRPRSYSRSPSPR 158
+ RN SP R RS S+SPS R
Sbjct: 129 --------YSRRNSSRSPIGKRGRSGSKSPSRR 153
>gi|225708540|gb|ACO10116.1| Splicing factor, arginine/serine-rich 5 [Osmerus mordax]
Length = 135
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F +GRIRD+D+KR F FVEF DPRDA+DA Y L+G+++
Sbjct: 3 GCRIFIGRLNPSAREKDVERFFKGFGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGKEL 62
Query: 70 DGSRIIVEFA 79
R+ +E A
Sbjct: 63 CNERVTIEHA 72
>gi|66809897|ref|XP_638672.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60467278|gb|EAL65311.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 365
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 9/117 (7%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+++Y+GRL R DL FS++G+I +++++ F F+E+ D ADDA S + ++
Sbjct: 2 SKIYIGRLNHDAREDDLYGRFSKFGKIDRLELRKGFCFIEYFDKASADDAINSEHKQNFL 61
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCY 127
G IIVE + S + + R P SG+CF C +GHWAR C G KN Y
Sbjct: 62 GRNIIVELS--------NSSKGIKR-PDSSSGKCFMCNEEGHWARSCPNGGKKNSRY 109
>gi|218196647|gb|EEC79074.1| hypothetical protein OsI_19658 [Oryza sativa Indica Group]
Length = 328
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 53/83 (63%), Gaps = 6/83 (7%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K +AFVEF DPRDA DA Y NG
Sbjct: 32 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRNGY 91
Query: 68 DVDGSRIIVEFARGGPRGPGGSR 90
D DG R+ VE A GG RGP R
Sbjct: 92 DFDGHRLRVELAHGG-RGPSFDR 113
>gi|449274552|gb|EMC83653.1| Splicing factor, arginine/serine-rich 7, partial [Columba livia]
Length = 197
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRDA+DA L+G+
Sbjct: 2 TKVYVGNLGTGAGKSELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVLGLDGK 61
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCK 118
+ GSR+ VE + G PR R R P + RC+ CG GH+A DC
Sbjct: 62 IICGSRVRVEVSTGMPRRSRYDRP-PARRPFDPNDRCYECGEKGHYAYDCH 111
>gi|426233598|ref|XP_004023549.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 5 [Ovis aries]
Length = 274
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 48/68 (70%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YG IRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGXIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|268531628|ref|XP_002630941.1| C. briggsae CBR-RSP-5 protein [Caenorhabditis briggsae]
Length = 213
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+G++ R RD+E YGRI ++ MK FAFV+F D RDA+DA + L+G+ +DG
Sbjct: 3 RIYLGKIPYHARERDIERFLKGYGRITNISMKYGFAFVDFEDYRDAEDACHDLDGKTMDG 62
Query: 72 S--RIIVEFARGGPRG 85
S R++VE A+G PRG
Sbjct: 63 SSMRVVVEMAKGKPRG 78
>gi|384494440|gb|EIE84931.1| hypothetical protein RO3G_09641 [Rhizopus delemar RA 99-880]
Length = 252
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 49/74 (66%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
TR+Y+GRLA RD+E +F YG IR++++K F FVEF+D RDA D Y +G+
Sbjct: 3 TRVYIGRLARDASKRDIERLFKNYGDIREINLKTGFGFVEFADERDAKDVVYDFHGKSFL 62
Query: 71 GSRIIVEFARGGPR 84
G R+IVE A+G R
Sbjct: 63 GERLIVEIAKGTRR 76
>gi|38649360|gb|AAH63235.1| Sfrs5a protein [Danio rerio]
Length = 182
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL+ R RD+E+ F YGRIR++++K F FVEF D RDADDA Y LNG+++
Sbjct: 3 GCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDYRDADDAVYELNGKEL 62
Query: 70 DGSRIIVEFA 79
R+ +E A
Sbjct: 63 CSERVTIEHA 72
>gi|332024474|gb|EGI64672.1| Serine-arginine protein 55 [Acromyrmex echinatior]
Length = 367
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 56/109 (51%), Gaps = 34/109 (31%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFV--------------------- 49
TR++VG L R R RDLE+ F +YGRI++V MK FAFV
Sbjct: 3 TRVFVGGLTYRVRERDLEKFFRKYGRIKEVAMKNGFAFVYGRDKSLCQRDLERFFRGYGR 62
Query: 50 -------------EFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRG 85
EF D RDADDA Y LNG+++ G RI VE ARG PRG
Sbjct: 63 FRDVLIKNGYGFVEFDDYRDADDAVYELNGKELLGERITVERARGTPRG 111
>gi|32563822|ref|NP_871914.1| Protein RSP-1, isoform c [Caenorhabditis elegans]
gi|26985892|emb|CAD59160.1| Protein RSP-1, isoform c [Caenorhabditis elegans]
Length = 150
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 51/71 (71%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
R+Y+GRL SR +D+E F YG+IRDV +K F FVEF D RDA+DA + LNG+++
Sbjct: 2 AARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKEL 61
Query: 70 DGSRIIVEFAR 80
G R+I+++++
Sbjct: 62 GGERVILDYSK 72
>gi|308502850|ref|XP_003113609.1| CRE-RSP-5 protein [Caenorhabditis remanei]
gi|308263568|gb|EFP07521.1| CRE-RSP-5 protein [Caenorhabditis remanei]
Length = 215
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+G++ R RD+E YGRI ++ MK FAFV+F D RDA+DA + L+G+ +DG
Sbjct: 3 RIYLGKIPYNARERDIERFLKGYGRITNISMKYGFAFVDFEDHRDAEDACHDLDGKTMDG 62
Query: 72 --SRIIVEFARGGPRG 85
R++VE ARG PRG
Sbjct: 63 GSMRVVVEMARGKPRG 78
>gi|432113649|gb|ELK35931.1| Vascular endothelial zinc finger 1 [Myotis davidii]
Length = 688
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 77 YDYDGYRLRVEF 88
>gi|149025039|gb|EDL81406.1| splicing factor, arginine/serine-rich 5, isoform CRA_e [Rattus
norvegicus]
Length = 108
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVEFA 79
+++ F+
Sbjct: 63 CSESVLMHFS 72
>gi|71996524|ref|NP_495307.3| Protein RSP-5, isoform a [Caenorhabditis elegans]
gi|50897847|sp|Q10021.3|RSP5_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 5;
AltName: Full=CeSC35-2; AltName: Full=RNA-binding
protein srp-3
gi|351064335|emb|CCD72697.1| Protein RSP-5, isoform a [Caenorhabditis elegans]
Length = 208
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
RLY+G++ R RD+E YG+I ++ MK FAFV+F D RDA+DA + L+G+ ++G
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKTMEG 62
Query: 72 S--RIIVEFARGGPRG 85
S R++VE ARG PRG
Sbjct: 63 SSMRLVVEMARGKPRG 78
>gi|307206112|gb|EFN84192.1| Splicing factor, arginine/serine-rich 7 [Harpegnathos saltator]
Length = 127
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGRD 68
++YVG L S ++LE+ FS YG +R+V + R FAFVEF DPRDA+DA L+GR
Sbjct: 9 KVYVGDLGSNASKQELEDAFSYYGSLRNVWVARHPPGFAFVEFEDPRDAEDAVRGLDGRT 68
Query: 69 VDGSRIIVEFARGG-PRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+ G R VE + G R G R R P RC+ CG GH+ARDC
Sbjct: 69 ICGRRARVELSNGKRLRDRGSMRRGAVRSYHP-EDRCYECGERGHYARDC 117
>gi|148298845|ref|NP_001091768.1| arginine/serine-rich splicing factor 7 [Bombyx mori]
gi|95103084|gb|ABF51483.1| arginine/serine-rich splicing factor 7 [Bombyx mori]
gi|102269217|gb|ABF55972.2| xl6 [Bombyx mori]
Length = 176
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 69/116 (59%), Gaps = 6/116 (5%)
Query: 7 RYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYS 63
RYG ++YVG L + +LE+ FS YG +R+V + R+ FAFVEF DPRDA+DA
Sbjct: 3 RYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRG 62
Query: 64 LNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS--GRCFNCGIDGHWARDC 117
L+GR + G R VE + GG RG G PP RC++CG GH+ARDC
Sbjct: 63 LDGRTICGRRARVEMSNGG-RGYGSRGPPPRSRLPPRPYDDRCYDCGDRGHYARDC 117
>gi|32563820|ref|NP_871913.1| Protein RSP-1, isoform b [Caenorhabditis elegans]
gi|26985891|emb|CAD59159.1| Protein RSP-1, isoform b [Caenorhabditis elegans]
Length = 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 51/71 (71%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
R+Y+GRL SR +D+E F YG+IRDV +K F FVEF D RDA+DA + LNG+++
Sbjct: 2 AARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKEL 61
Query: 70 DGSRIIVEFAR 80
G R+I+++++
Sbjct: 62 GGERVILDYSK 72
>gi|148223523|ref|NP_001086618.1| MGC78845 protein [Xenopus laevis]
gi|50603914|gb|AAH77185.1| MGC78845 protein [Xenopus laevis]
Length = 224
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 68/121 (56%), Gaps = 4/121 (3%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDA 57
M RY G ++YVG L + +LE FS YG +R V + R+ FAFVEF D RDA
Sbjct: 1 MSRYGRYAGEAKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDTRDA 60
Query: 58 DDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+DA L+G+ + GSR+ VE + G PR R R P S RC+ CG GH+A DC
Sbjct: 61 EDAVRGLDGKVICGSRVRVELSTGMPRRSRYDRP-PARRPFDPSDRCYECGEKGHYAYDC 119
Query: 118 K 118
+
Sbjct: 120 Q 120
>gi|156379214|ref|XP_001631353.1| predicted protein [Nematostella vectensis]
gi|156218392|gb|EDO39290.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+++GRL R D+E+ YG+IRD+ +KR + FVEF D RDA+DA + LNGRD+
Sbjct: 2 SRIFLGRLPRDVRESDVEKFLRGYGKIRDISLKRGYGFVEFDDHRDAEDAVHDLNGRDLI 61
Query: 71 GSRIIVEFARGGPRGPGGSRE 91
G R++VEF++ G R GG R+
Sbjct: 62 GERVVVEFSK-GRRSEGGGRD 81
>gi|148706561|gb|EDL38508.1| mCG17902, isoform CRA_g [Mus musculus]
Length = 165
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 66/117 (56%), Gaps = 16/117 (13%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRDA+DA L+G+
Sbjct: 39 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 98
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG------SGRCFNCGIDGHWARDCK 118
+ GSR+ VE + G PR R R PP + RC+ CG GH+A DC
Sbjct: 99 VICGSRVRVELSTGMPR-----RSRFDR--PPARRPFDPNDRCYECGEKGHYAYDCH 148
>gi|410339103|gb|JAA38498.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410339105|gb|JAA38499.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 238
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 75/143 (52%), Gaps = 28/143 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P RC
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----ARC------------ 98
Query: 117 CKAGDWKNKCYRCGERGHIERNC 139
D ++CY CGE+GH +C
Sbjct: 99 --PFDPNDRCYECGEKGHYAYDC 119
>gi|242012315|ref|XP_002426878.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
gi|212511107|gb|EEB14140.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
Length = 192
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 72/143 (50%), Gaps = 24/143 (16%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDA 57
M RY D ++YVG L S +DLE+ F YG +++V + R FAFVEF DPRDA
Sbjct: 1 MSRYRDSGSDCKVYVGDLGSSASKQDLEDAFGYYGPLKNVWVARHPPGFAFVEFEDPRDA 60
Query: 58 DDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
DDA L+GR + G R+ VE + G R G R RG P
Sbjct: 61 DDAVRGLDGRSIAGRRVRVEPSNGMARRRGRDRGVSRRGRPFHP---------------- 104
Query: 118 KAGDWKNKCYRCGERGHIERNCQ 140
++CY+CGERGH R+C+
Sbjct: 105 -----DDRCYQCGERGHYARDCK 122
>gi|340503359|gb|EGR29956.1| hypothetical protein IMG5_145470 [Ichthyophthirius multifiliis]
Length = 221
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 9/106 (8%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
++YV +SRT DL+ F +YG I D++MKR +AF+ + D A+DA ++ ++G
Sbjct: 7 QIYVTNFSSRTNEEDLQYEFKKYGSIVDINMKRSYAFITYDDYHSAEDAIRKMDKAVING 66
Query: 72 SRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+I+VE P G ++ RGP +CF CG GHWA +C
Sbjct: 67 KQILVE--------PAGLKKIRPRGPQL-DDKCFKCGRRGHWANEC 103
>gi|148706566|gb|EDL38513.1| mCG17902, isoform CRA_l [Mus musculus]
Length = 243
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 9 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 67
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 68 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 105
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 106 -RPFDPNDRCYECGEKGHYAYDCH 128
>gi|72012937|ref|XP_780865.1| PREDICTED: uncharacterized protein LOC575368 [Strongylocentrotus
purpuratus]
Length = 200
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 65/111 (58%), Gaps = 17/111 (15%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMK----RDFAFVEFSDPRDADDARYSLNG 66
+L++GRL+ TR RD+E++F YG++ ++K +AFV++ D RDA+DA NG
Sbjct: 3 AQLFIGRLSKNTRQRDVEDMFDYYGKMSRCELKFGSGMAYAFVDYVDKRDAEDAIKHENG 62
Query: 67 RDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
++++G I+VE+ARG RG C+ CG GH+ARDC
Sbjct: 63 KELNGQSIVVEWARGPKRG-------------FEDDECYRCGRRGHFARDC 100
>gi|346471975|gb|AEO35832.1| hypothetical protein [Amblyomma maculatum]
Length = 223
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 4/91 (4%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
R+YVG L RS+D+E++F ++G+I +D+K FAFVEF DPRDA+DA ++ +G
Sbjct: 9 RIYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 68
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPP 98
D DG R+ VEF RG G G GRGPP
Sbjct: 69 DYDGYRLRVEFPRGSAPGRGSMGPGRGRGPP 99
>gi|325303176|tpg|DAA34416.1| TPA_inf: alternative splicing factor ASF/SF2 [Amblyomma
variegatum]
Length = 222
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 4/91 (4%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
R+YVG L RS+D+E++F ++G+I +D+K FAFVEF DPRDA+DA ++ +G
Sbjct: 9 RIYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 68
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPP 98
D DG R+ VEF RG G G GRGPP
Sbjct: 69 DYDGYRLRVEFPRGSAPGRGSMGPGRGRGPP 99
>gi|126309365|ref|XP_001367778.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Monodelphis
domestica]
Length = 235
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 72/137 (52%), Gaps = 27/137 (19%)
Query: 7 RYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARY 62
RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRDA+DA
Sbjct: 6 RYGGETKVYVGNLETGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVQ 65
Query: 63 SLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDW 122
L+G+ + GSR+ VE + G PR R R P RC D
Sbjct: 66 GLDGKVICGSRVRVELSTGLPR-----RSRYDRPP----ARC--------------PFDP 102
Query: 123 KNKCYRCGERGHIERNC 139
++CY CGE+GH +C
Sbjct: 103 NDRCYECGEKGHYAYDC 119
>gi|417397587|gb|JAA45827.1| Putative serine/arginine-rich splicing factor 7 [Desmodus rotundus]
Length = 235
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 76/143 (53%), Gaps = 28/143 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNC 139
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDC 119
>gi|189241002|ref|XP_968789.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 200
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 70/123 (56%), Gaps = 18/123 (14%)
Query: 7 RYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARY 62
RYG ++YVG L + ++LE+ F YG +R+V + R+ FAFVEF D RDA+DA
Sbjct: 3 RYGSDCKVYVGDLGNSASKQELEDAFRYYGPLRNVWVARNPPGFAFVEFEDARDAEDAIR 62
Query: 63 SLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS--------GRCFNCGIDGHWA 114
L+GR + G R VE + G GS Y RGPPP S RC+ CG GH+A
Sbjct: 63 GLDGRTICGRRARVEMSNG----KSGSGRY--RGPPPRSRGRPFHPDDRCYECGDRGHYA 116
Query: 115 RDC 117
RDC
Sbjct: 117 RDC 119
>gi|325303436|tpg|DAA34137.1| TPA_exp: alternative splicing factor SRp20/9G8 [Amblyomma
variegatum]
Length = 192
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 66/114 (57%), Gaps = 11/114 (9%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LEE F YG +R+V + R FAFVEF DPRDA DA +L+G+
Sbjct: 12 CKVYVGELGNSGTKHELEEAFGYYGPLRNVWVARSPPGFAFVEFEDPRDARDAVRALDGK 71
Query: 68 DVDGSRIIVEFARGGPRGP--GGSREYLGRGPPPGSGRCFNCGIDGHWARDCKA 119
+ G R+ VE + G R G SR P + RC++CG GH+ARDC+
Sbjct: 72 MLCGRRVRVELSTGKSRNSYRGSSR------PFQPTDRCYDCGERGHYARDCRV 119
>gi|444720822|gb|ELW61591.1| Vascular endothelial zinc finger 1 [Tupaia chinensis]
Length = 399
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEFAR 80
D DG R+ VEF R
Sbjct: 77 YDYDGYRLRVEFPR 90
>gi|270012981|gb|EFA09429.1| hypothetical protein TcasGA2_TC010640 [Tribolium castaneum]
Length = 202
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 70/123 (56%), Gaps = 18/123 (14%)
Query: 7 RYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARY 62
RYG ++YVG L + ++LE+ F YG +R+V + R+ FAFVEF D RDA+DA
Sbjct: 3 RYGSDCKVYVGDLGNSASKQELEDAFRYYGPLRNVWVARNPPGFAFVEFEDARDAEDAIR 62
Query: 63 SLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS--------GRCFNCGIDGHWA 114
L+GR + G R VE + G GS Y RGPPP S RC+ CG GH+A
Sbjct: 63 GLDGRTICGRRARVEMSNG----KSGSGRY--RGPPPRSRGRPFHPDDRCYECGDRGHYA 116
Query: 115 RDC 117
RDC
Sbjct: 117 RDC 119
>gi|395533733|ref|XP_003768907.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Sarcophilus
harrisii]
Length = 235
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 72/137 (52%), Gaps = 27/137 (19%)
Query: 7 RYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARY 62
RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRDA+DA
Sbjct: 6 RYGGETKVYVGNLETGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVQ 65
Query: 63 SLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDW 122
L+G+ + GSR+ VE + G PR R R P RC D
Sbjct: 66 GLDGKVICGSRVRVELSTGLPR-----RSRYDRPP----ARC--------------PFDP 102
Query: 123 KNKCYRCGERGHIERNC 139
++CY CGE+GH +C
Sbjct: 103 NDRCYECGEKGHYAYDC 119
>gi|306774101|ref|NP_001182415.1| serine/arginine-rich splicing factor 7 isoform 3 [Mus musculus]
Length = 227
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|306774098|ref|NP_001182414.1| serine/arginine-rich splicing factor 7 isoform 2 [Mus musculus]
gi|26350021|dbj|BAC38650.1| unnamed protein product [Mus musculus]
Length = 235
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|148706559|gb|EDL38506.1| mCG17902, isoform CRA_e [Mus musculus]
gi|149050605|gb|EDM02778.1| rCG61762, isoform CRA_g [Rattus norvegicus]
Length = 215
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|410339107|gb|JAA38500.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 226
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 75/143 (52%), Gaps = 28/143 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P RC
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----ARC------------ 98
Query: 117 CKAGDWKNKCYRCGERGHIERNC 139
D ++CY CGE+GH +C
Sbjct: 99 --PFDPNDRCYECGEKGHYAYDC 119
>gi|324513496|gb|ADY45545.1| Serine/arginine-rich splicing factor 4 [Ascaris suum]
Length = 310
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 49/69 (71%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
RLYVGR++ + D+E F YGRI D+ +K +AFVEF DPRDA+DA Y L+G+++ G
Sbjct: 4 RLYVGRVSRYASASDIEWFFRGYGRISDIVLKNGYAFVEFDDPRDAEDAVYELSGKELCG 63
Query: 72 SRIIVEFAR 80
R+ +EF R
Sbjct: 64 ERVNIEFTR 72
>gi|348574612|ref|XP_003473084.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Cavia porcellus]
Length = 235
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|327262671|ref|XP_003216147.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Anolis carolinensis]
Length = 235
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRYDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|431912751|gb|ELK14769.1| Splicing factor, arginine/serine-rich 7 [Pteropus alecto]
Length = 235
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|77735509|ref|NP_001029449.1| serine/arginine-rich splicing factor 7 [Bos taurus]
gi|122146164|sp|Q3T106.1|SRSF7_BOVIN RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor, arginine/serine-rich 7
gi|74354545|gb|AAI02185.1| Splicing factor, arginine/serine-rich 7, 35kDa [Bos taurus]
gi|296482569|tpg|DAA24684.1| TPA: splicing factor, arginine/serine-rich 7 [Bos taurus]
Length = 235
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|358331940|dbj|GAA50688.1| serine/arginine-rich splicing factor 4 [Clonorchis sinensis]
Length = 207
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 51/73 (69%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+Y+G L +R RD+E F YGR+RDV +K + FVEF + +DADDA Y L+GR++
Sbjct: 2 SRVYIGHLPARCSERDIERFFKGYGRLRDVVLKNGYGFVEFDNEKDADDAVYDLHGRELR 61
Query: 71 GSRIIVEFARGGP 83
G RIIVE AR P
Sbjct: 62 GERIIVEHARLPP 74
>gi|307133722|ref|NP_001182517.1| splicing factor, arginine/serine-rich 7 [Equus caballus]
gi|73980752|ref|XP_532939.2| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Canis
lupus familiaris]
gi|301777346|ref|XP_002924090.1| PREDICTED: splicing factor, arginine/serine-rich 7-like [Ailuropoda
melanoleuca]
gi|311252785|ref|XP_003125258.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Sus scrofa]
gi|410955427|ref|XP_003984355.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Felis
catus]
gi|426223793|ref|XP_004006058.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Ovis
aries]
gi|440907651|gb|ELR57771.1| Serine/arginine-rich splicing factor 7 [Bos grunniens mutus]
Length = 238
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|297265840|ref|XP_002799297.1| PREDICTED: splicing factor, arginine/serine-rich 7-like isoform 2
[Macaca mulatta]
Length = 165
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|307180295|gb|EFN68328.1| Splicing factor, arginine/serine-rich 7 [Camponotus floridanus]
Length = 156
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 67/110 (60%), Gaps = 5/110 (4%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGRD 68
++YVG L S ++LE+ FS YG +++V + R+ FAFVEF DPRDA+DA L+GR
Sbjct: 12 KVYVGDLGSSASKQELEDAFSYYGSLQNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGRT 71
Query: 69 VDGSRIIVEFARG-GPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+ G R+ VE + G R G R GR P +C+ CG GH+ARDC
Sbjct: 72 LCGRRVRVELSNGKKLRDRGSFRRGSGR-PFHPEDKCYECGERGHYARDC 120
>gi|221122641|ref|XP_002154006.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Hydra
magnipapillata]
Length = 259
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 58/78 (74%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
RLYVGRL +R RDL++ F YG+IRD+ MK +AFV+F D RDADDA Y LNG+++ G
Sbjct: 3 RLYVGRLNNRVIERDLKKFFDNYGKIRDIMMKNGYAFVDFDDYRDADDAVYDLNGKELMG 62
Query: 72 SRIIVEFARGGPRGPGGS 89
R+I+E A+G RG GG+
Sbjct: 63 DRVIIEHAKGIERGSGGA 80
>gi|159163525|pdb|1X4A|A Chain A, Solution Structure Of Rrm Domain In Splicing Factor Sf2
Length = 109
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 6/81 (7%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 24 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 83
Query: 67 RDVDGSRIIVEFARGGPRGPG 87
D DG R+ VEF R G RG G
Sbjct: 84 YDYDGYRLRVEFPRSG-RGTG 103
>gi|281350478|gb|EFB26062.1| hypothetical protein PANDA_013342 [Ailuropoda melanoleuca]
Length = 120
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 66/117 (56%), Gaps = 16/117 (13%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRDA+DA L+G+
Sbjct: 2 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 61
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG------SGRCFNCGIDGHWARDCK 118
+ GSR+ VE + G PR R R PP + RC+ CG GH+A DC
Sbjct: 62 VICGSRVRVELSTGMPR-----RSRFDR--PPARRPFDPNDRCYECGEKGHYAYDCH 111
>gi|395846036|ref|XP_003795721.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Otolemur garnettii]
gi|351715512|gb|EHB18431.1| Splicing factor, arginine/serine-rich 7 [Heterocephalus glaber]
Length = 238
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|344288799|ref|XP_003416134.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Loxodonta africana]
Length = 238
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|242002226|ref|XP_002435756.1| RSZp22 protein, putative [Ixodes scapularis]
gi|215499092|gb|EEC08586.1| RSZp22 protein, putative [Ixodes scapularis]
Length = 199
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 66/114 (57%), Gaps = 11/114 (9%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LEE F YG +R+V + R FAFVEF DPRDA DA +L+G+
Sbjct: 12 CKVYVGELGNSGTKHELEESFGYYGPLRNVWVARSPPGFAFVEFEDPRDARDAVRALDGK 71
Query: 68 DVDGSRIIVEFARGGPRGP--GGSREYLGRGPPPGSGRCFNCGIDGHWARDCKA 119
+ G R+ VE + G R G SR P + RC++CG GH+ARDC+
Sbjct: 72 MLCGRRVRVELSTGKSRNSYRGSSR------PFQPTDRCYDCGERGHYARDCRV 119
>gi|306774103|ref|NP_001182416.1| serine/arginine-rich splicing factor 7 isoform 4 [Mus musculus]
Length = 223
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|348574614|ref|XP_003473085.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Cavia porcellus]
Length = 227
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 76/143 (53%), Gaps = 28/143 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNC 139
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDC 119
>gi|297265846|ref|XP_002799299.1| PREDICTED: splicing factor, arginine/serine-rich 7-like isoform 4
[Macaca mulatta]
Length = 208
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 76/143 (53%), Gaps = 28/143 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNC 139
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDC 119
>gi|22122585|ref|NP_666195.1| serine/arginine-rich splicing factor 7 isoform 1 [Mus musculus]
gi|306922410|ref|NP_001034124.2| splicing factor, arginine/serine-rich 7 [Rattus norvegicus]
gi|19343869|gb|AAH25529.1| Splicing factor, arginine/serine-rich 7 [Mus musculus]
gi|74202235|dbj|BAE23499.1| unnamed protein product [Mus musculus]
gi|74212267|dbj|BAE40291.1| unnamed protein product [Mus musculus]
gi|148706555|gb|EDL38502.1| mCG17902, isoform CRA_a [Mus musculus]
gi|149050602|gb|EDM02775.1| rCG61762, isoform CRA_d [Rattus norvegicus]
Length = 238
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|115463447|ref|NP_001055323.1| Os05g0364600 [Oryza sativa Japonica Group]
gi|113578874|dbj|BAF17237.1| Os05g0364600 [Oryza sativa Japonica Group]
Length = 294
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 53/83 (63%), Gaps = 6/83 (7%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K +AFVEF DPRDA DA Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRHGY 68
Query: 68 DVDGSRIIVEFARGGPRGPGGSR 90
D DG R+ VE A GG RGP R
Sbjct: 69 DFDGHRLRVELAHGG-RGPSFDR 90
>gi|322787527|gb|EFZ13615.1| hypothetical protein SINV_15244 [Solenopsis invicta]
Length = 128
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 66/110 (60%), Gaps = 5/110 (4%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGRD 68
++YVG L S + LE+ FS YG + +V + R+ FAFVEF DPRDA+DA L+GR
Sbjct: 11 KVYVGDLGSSASKQQLEDAFSYYGPLHNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGRI 70
Query: 69 VDGSRIIVEFARG-GPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
V G RI VE + G R G R +GR P +C+ CG GH+ARDC
Sbjct: 71 VCGRRIRVELSNGKKLRDRGFPRRGVGR-PFHPEDKCYECGERGHYARDC 119
>gi|194374435|dbj|BAG57113.1| unnamed protein product [Homo sapiens]
Length = 165
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 73/143 (51%), Gaps = 26/143 (18%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDA 57
M RY G T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRDA
Sbjct: 1 MSRYGRHGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDA 60
Query: 58 DDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 61 EDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR-- 97
Query: 118 KAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 RPFDPNDRCYECGEKGHYAYDCH 120
>gi|380815574|gb|AFE79661.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|383420741|gb|AFH33584.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|384948776|gb|AFI37993.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
Length = 235
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 76/143 (53%), Gaps = 28/143 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNC 139
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDC 119
>gi|363731484|ref|XP_003640982.1| PREDICTED: uncharacterized protein LOC100859609 [Gallus gallus]
Length = 250
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVEVSTGMPR-----RSRYDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|71996546|ref|NP_495308.3| Protein RSP-5, isoform d [Caenorhabditis elegans]
gi|351064338|emb|CCD72700.1| Protein RSP-5, isoform d [Caenorhabditis elegans]
Length = 208
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
RLY+G++ R RD+E YG+I ++ MK FAFV+F D RDA+DA + L+G+ ++G
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKTMEG 62
Query: 72 S--RIIVEFARGGPRG 85
S R++VE ARG PRG
Sbjct: 63 SSMRLVVEMARGKPRG 78
>gi|197692449|dbj|BAG70188.1| splicing factor arginine/serine-rich 5 [Homo sapiens]
Length = 107
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 48/68 (70%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR FVEF DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGIGFVEFEDPRDADDAVYELDGKEL 62
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 63 CSERVTIE 70
>gi|301116808|ref|XP_002906132.1| pre-mRNA-splicing factor SF2 [Phytophthora infestans T30-4]
gi|262107481|gb|EEY65533.1| pre-mRNA-splicing factor SF2 [Phytophthora infestans T30-4]
Length = 297
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 55/80 (68%), Gaps = 5/80 (6%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSL 64
GTR+YVG L R+R++E+IF +YGRIRD+D+K FAFV+F D RDA+DA
Sbjct: 3 GTRVYVGNLPMDIRTREVEDIFYKYGRIRDIDVKFPSRPPAFAFVDFEDARDAEDAIRGR 62
Query: 65 NGRDVDGSRIIVEFARGGPR 84
+G D DG+R+ VE A GG R
Sbjct: 63 DGYDYDGARLRVEAANGGRR 82
>gi|72534660|ref|NP_001026854.1| serine/arginine-rich splicing factor 7 isoform 1 [Homo sapiens]
gi|307133718|ref|NP_001182515.1| splicing factor, arginine/serine-rich 7 [Macaca mulatta]
gi|307133726|ref|NP_001182519.1| splicing factor, arginine/serine-rich 7 [Pongo abelii]
gi|296224047|ref|XP_002757879.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Callithrix jacchus]
gi|332227248|ref|XP_003262805.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Nomascus leucogenys]
gi|332813155|ref|XP_515421.3| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Pan
troglodytes]
gi|397493583|ref|XP_003817683.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Pan
paniscus]
gi|397493585|ref|XP_003817684.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Pan
paniscus]
gi|402890618|ref|XP_003908580.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Papio
anubis]
gi|403269672|ref|XP_003926840.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Saimiri boliviensis boliviensis]
gi|426335282|ref|XP_004029157.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Gorilla gorilla gorilla]
gi|3929380|sp|Q16629.1|SRSF7_HUMAN RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor 9G8; AltName: Full=Splicing factor,
arginine/serine-rich 7
gi|506402|gb|AAA35495.1| 9G8 splicing factor [Homo sapiens]
gi|950424|gb|AAA88098.1| splicing factor, arginine/serine-rich 7 [Homo sapiens]
gi|12654349|gb|AAH00997.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|16924200|gb|AAH17369.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|17389794|gb|AAH17908.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|18490620|gb|AAH22328.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|27369421|gb|AAN87842.1| arginine/serine-rich splicing factor 7 type B [Homo sapiens]
gi|30582329|gb|AAP35391.1| splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|46981983|gb|AAT08040.1| aging-associated protein 3 [Homo sapiens]
gi|61361883|gb|AAX42119.1| splicing factor arginine/serine-rich 7 [synthetic construct]
gi|61361888|gb|AAX42120.1| splicing factor arginine/serine-rich 7 [synthetic construct]
gi|62702176|gb|AAX93102.1| unknown [Homo sapiens]
gi|67970972|dbj|BAE01828.1| unnamed protein product [Macaca fascicularis]
gi|90076474|dbj|BAE87917.1| unnamed protein product [Macaca fascicularis]
gi|119620771|gb|EAX00366.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_d [Homo
sapiens]
gi|261858750|dbj|BAI45897.1| splicing factor, arginine/serine-rich 7, 35kDa [synthetic
construct]
gi|292698389|dbj|BAI99737.1| splicing factor, arginine/serine-rich 7 [Homo sapiens]
gi|355565621|gb|EHH22050.1| hypothetical protein EGK_05239 [Macaca mulatta]
gi|355751260|gb|EHH55515.1| hypothetical protein EGM_04737 [Macaca fascicularis]
gi|380815572|gb|AFE79660.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|383420743|gb|AFH33585.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|384948778|gb|AFI37994.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|410213320|gb|JAA03879.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410251182|gb|JAA13558.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410299022|gb|JAA28111.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 238
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 76/143 (53%), Gaps = 28/143 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNC 139
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDC 119
>gi|350538991|ref|NP_001232123.1| putative splicing factor arginine/serine-rich 7 variant 2
[Taeniopygia guttata]
gi|197127816|gb|ACH44314.1| putative splicing factor arginine/serine-rich 7 variant 2
[Taeniopygia guttata]
Length = 250
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVEVSTGMPR-----RSRYDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|126304540|ref|XP_001362853.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Monodelphis
domestica]
Length = 233
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRYDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|222631305|gb|EEE63437.1| hypothetical protein OsJ_18250 [Oryza sativa Japonica Group]
Length = 305
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 53/83 (63%), Gaps = 6/83 (7%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K +AFVEF DPRDA DA Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRHGY 68
Query: 68 DVDGSRIIVEFARGGPRGPGGSR 90
D DG R+ VE A GG RGP R
Sbjct: 69 DFDGHRLRVELAHGG-RGPSFDR 90
>gi|348687956|gb|EGZ27770.1| hypothetical protein PHYSODRAFT_246920 [Phytophthora sojae]
Length = 838
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 59/88 (67%), Gaps = 10/88 (11%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSL 64
GTR+YVG L R+R++E+IF +YGRIRD+D+K FAFV+F DPRDA+DA
Sbjct: 530 GTRVYVGNLPMDIRTREVEDIFYKYGRIRDIDVKFPSRPPAFAFVDFEDPRDAEDAIRGR 589
Query: 65 NGRDVDGSRIIVEFARGG-----PRGPG 87
+G D DG+R+ VE A GG PRG G
Sbjct: 590 DGYDYDGARLRVEPANGGRRESAPRGSG 617
>gi|348574616|ref|XP_003473086.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 3
[Cavia porcellus]
Length = 223
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|405954502|gb|EKC21922.1| Splicing factor, arginine/serine-rich 6 [Crassostrea gigas]
Length = 231
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 64/109 (58%), Gaps = 7/109 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMK----RDFAFVEFSDPRDADDARYSLNGRD 68
L++GRL+ T+ R LE++F YGR+ D+K + FV++ D RDA+DA NGR+
Sbjct: 9 LFIGRLSKNTQPRHLEDVFEPYGRLIRCDVKYGAEMAYGFVDYEDRRDAEDALKYENGRE 68
Query: 69 VDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+ GS I VE+A+G PR P + G G C+ C GH+ARDC
Sbjct: 69 ICGSSIRVEWAKGNPRRPYAASSNRGGGM---YDECYRCHRTGHFARDC 114
>gi|417407851|gb|JAA50519.1| Putative splicing factor arginine/serine-rich 7 35kda isoform cra
b, partial [Desmodus rotundus]
Length = 123
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 66/117 (56%), Gaps = 16/117 (13%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRDA+DA L+G+
Sbjct: 2 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 61
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG------SGRCFNCGIDGHWARDCK 118
+ GSR+ VE + G PR R R PP + RC+ CG GH+A DC
Sbjct: 62 VICGSRVRVELSTGMPR-----RSRFDR--PPARRPFDPNDRCYECGEKGHYAYDCH 111
>gi|30584739|gb|AAP36622.1| Homo sapiens splicing factor, arginine/serine-rich 7, 35kDa
[synthetic construct]
gi|60653769|gb|AAX29578.1| splicing factor arginine/serine-rich 7 35kDa [synthetic construct]
gi|60653771|gb|AAX29579.1| splicing factor arginine/serine-rich 7 35kDa [synthetic construct]
Length = 239
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 76/143 (53%), Gaps = 28/143 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNC 139
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDC 119
>gi|311252787|ref|XP_003125259.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Sus scrofa]
gi|345782230|ref|XP_003432237.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Canis
lupus familiaris]
gi|410955429|ref|XP_003984356.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Felis
catus]
gi|426223795|ref|XP_004006059.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Ovis
aries]
Length = 226
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|391330558|ref|XP_003739725.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Metaseiulus
occidentalis]
Length = 217
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 76/133 (57%), Gaps = 24/133 (18%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNG 66
+R+YVG L R++D+E++F +YG+I +D+K FAFVEF DPRDA+DA + +G
Sbjct: 7 SRVYVGNLPPDIRTKDIEDLFHKYGKITFIDLKNRRGPPFAFVEFEDPRDAEDAVSARDG 66
Query: 67 RDVDGSRIIVEFARGG---PRGPGGSREYLGRGPPP--GSGRCFNCGI--DGHWARDCK- 118
D DG ++ VEF RG PRG G SR GRGPP R G+ G W +D K
Sbjct: 67 YDYDGYKLRVEFPRGNSARPRG-GPSR---GRGPPARRSQYRVIVTGLPPTGSW-QDLKD 121
Query: 119 ----AGDWKNKCY 127
AGD CY
Sbjct: 122 HMREAGD---VCY 131
>gi|395846038|ref|XP_003795722.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Otolemur garnettii]
Length = 226
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|344288801|ref|XP_003416135.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Loxodonta africana]
Length = 226
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|156358473|ref|XP_001624543.1| predicted protein [Nematostella vectensis]
gi|156211330|gb|EDO32443.1| predicted protein [Nematostella vectensis]
Length = 189
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 50/75 (66%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
TR+Y GRL R RDLE+ YGR+R++ MK + FVEF D RDADD Y LNGR++
Sbjct: 5 TRVYFGRLPRDCRERDLEKFVRGYGRVREISMKLGYGFVEFDDYRDADDCVYDLNGRNLL 64
Query: 71 GSRIIVEFARGGPRG 85
G R++VE +R RG
Sbjct: 65 GERVVVEHSRNPSRG 79
>gi|427777641|gb|JAA54272.1| Putative sf2 [Rhipicephalus pulchellus]
Length = 223
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 58/91 (63%), Gaps = 4/91 (4%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
R+YVG L RS+D+E++F ++G+I +D+K FAFVEF DPRDA+DA + +G
Sbjct: 9 RIYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPPFAFVEFDDPRDAEDAVQARDGY 68
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPP 98
D DG R+ VEF RG G G GRGPP
Sbjct: 69 DYDGYRLRVEFPRGSAPGRGSMGPGRGRGPP 99
>gi|148706562|gb|EDL38509.1| mCG17902, isoform CRA_h [Mus musculus]
gi|149050603|gb|EDM02776.1| rCG61762, isoform CRA_e [Rattus norvegicus]
Length = 226
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|71996532|ref|NP_495309.3| Protein RSP-5, isoform b [Caenorhabditis elegans]
gi|351064336|emb|CCD72698.1| Protein RSP-5, isoform b [Caenorhabditis elegans]
Length = 166
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
RLY+G++ R RD+E YG+I ++ MK FAFV+F D RDA+DA + L+G+ ++G
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKTMEG 62
Query: 72 S--RIIVEFARGGPRG 85
S R++VE ARG PRG
Sbjct: 63 SSMRLVVEMARGKPRG 78
>gi|402220870|gb|EJU00940.1| hypothetical protein DACRYDRAFT_108285 [Dacryopinax sp. DJM-731
SS1]
Length = 491
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
++Y+G L TR DL+ F + G + ++++K + FVEF + + A++A N
Sbjct: 68 NKVYIGGLPETTRDEDLQNCFGKLGNVVNIELKLGYGFVEFDNVKAAEEAVAKYNEGYFM 127
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
GS+I VE + GG R S + G CF CG GHWAR+C G
Sbjct: 128 GSKIKVEQSHGGGRTSKYSND---------PGACFKCGQHGHWARECPNG 168
>gi|328774313|gb|EGF84350.1| hypothetical protein BATDEDRAFT_85071 [Batrachochytrium
dendrobatidis JAM81]
Length = 542
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 104/207 (50%), Gaps = 50/207 (24%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD-FAFVE------------FSDP--- 54
+++YVG L R+L+++F YG+I +++K +AFV+ FS P
Sbjct: 44 SKVYVGHLPYNVAKRELDDLFVTYGKILSIEIKHGGYAFVQYGLLSVMCLASLFSVPFHM 103
Query: 55 ---RDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDG 111
+DAD+A +LN DG R++VEF+ R+ +G C CG +G
Sbjct: 104 KTQKDADEAVLALNNHSFDGRRLLVEFS--------NKRDSVGNS-------CLLCGNEG 148
Query: 112 HWARDC-----KAGDWKN-KCYRCGERGHIERNCQN--------SPKKLRPRSYSRSPSP 157
HWARDC + D K+ KC++CG GH+ R C+ P +R + Y S
Sbjct: 149 HWARDCPDNKERGADVKSGKCFKCGSFGHLARFCRGPDTGSMVGVPVTVRDQGYPSKSSY 208
Query: 158 RR--GRSRSRSYSRGRSDSRSRSPVKR 182
R RSRSRS S+ RS SRSRSP+ +
Sbjct: 209 RHLGFRSRSRSRSKSRSRSRSRSPIYK 235
>gi|306482694|ref|NP_001182375.1| serine/arginine-rich splicing factor 7 isoform 2 [Homo sapiens]
gi|297265844|ref|XP_002799298.1| PREDICTED: splicing factor, arginine/serine-rich 7-like isoform 3
[Macaca mulatta]
gi|332227250|ref|XP_003262806.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Nomascus leucogenys]
gi|390474551|ref|XP_003734800.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Callithrix jacchus]
gi|402890620|ref|XP_003908581.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Papio
anubis]
gi|403269674|ref|XP_003926841.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Saimiri boliviensis boliviensis]
gi|426335284|ref|XP_004029158.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Gorilla gorilla gorilla]
gi|119620770|gb|EAX00365.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_c [Homo
sapiens]
gi|383420739|gb|AFH33583.1| serine/arginine-rich splicing factor 7 isoform 2 [Macaca mulatta]
gi|384948774|gb|AFI37992.1| serine/arginine-rich splicing factor 7 isoform 2 [Macaca mulatta]
gi|387542062|gb|AFJ71658.1| serine/arginine-rich splicing factor 7 isoform 2 [Macaca mulatta]
gi|410213318|gb|JAA03878.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410251180|gb|JAA13557.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410299020|gb|JAA28110.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 226
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 76/143 (53%), Gaps = 28/143 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNC 139
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDC 119
>gi|355718930|gb|AES06434.1| splicing factor, arginine/serine-rich 7, 35kDa [Mustela putorius
furo]
Length = 199
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 10 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 68
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 69 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 106
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 107 -RPFDPNDRCYECGEKGHYAYDCH 129
>gi|432882993|ref|XP_004074180.1| PREDICTED: uncharacterized protein LOC101163182 isoform 4
[Oryzias latipes]
Length = 344
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 46/61 (75%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+R+Y+GRL+ R R +D+E F YG+I +VD+K + FVEF DPRDADDA Y LNG+++
Sbjct: 2 SRVYIGRLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKELC 61
Query: 71 G 71
G
Sbjct: 62 G 62
>gi|340504267|gb|EGR30725.1| splicing arginine serine-rich 6, putative [Ichthyophthirius
multifiliis]
Length = 371
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 20/125 (16%)
Query: 21 RTRSRDLEEIFSRYGRIRDVDMK----RDFAFVEFSDPRDADDARYSLNGRDVDGSRIIV 76
+ RDLE +F +YG+IR++ +K ++ F+EF D RDA DA N + G ++ +
Sbjct: 7 QANERDLENLFIKYGKIREIKIKSKGANNYGFIEFEDQRDAKDALEECNNLEFKGKQLRI 66
Query: 77 EFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC--KAGDWKNKCYRCGERGH 134
EF G GG R+ L C+ CG + H +DC K GD K KCY+CG H
Sbjct: 67 EF------GHGGRRKRL--------QNCYYCGRNNHNMKDCRKKYGDGKPKCYKCGSINH 112
Query: 135 IERNC 139
++C
Sbjct: 113 KFKDC 117
>gi|410910210|ref|XP_003968583.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Takifugu
rubripes]
gi|47227796|emb|CAG08959.1| unnamed protein product [Tetraodon nigroviridis]
Length = 245
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAF+EF DPRDADDA Y +G
Sbjct: 15 RIYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDG 74
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 75 YDYDGYRLRVEF 86
>gi|225717806|gb|ACO14749.1| Serine-arginine protein 55 [Caligus clemensi]
Length = 189
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RD+E+ F YGRIR+V +K + FVEF DPRDADD ++G++
Sbjct: 4 GSRVYVGNLPENVRERDVEKFFKEYGRIREVVIKSGYGFVEFDDPRDADDVVNDMDGKEF 63
Query: 70 DGSRIIVEFAR 80
G R+ VE AR
Sbjct: 64 QGGRVRVEMAR 74
>gi|269849649|sp|Q7SXP4.2|SRS1A_DANRE RecName: Full=Serine/arginine-rich splicing factor 1A; AltName:
Full=Splicing factor, arginine/serine-rich 1; AltName:
Full=Splicing factor, arginine/serine-rich 1A
gi|157423199|gb|AAI53597.1| Sfrs1l protein [Danio rerio]
gi|157423322|gb|AAI53598.1| Sfrs1l protein [Danio rerio]
Length = 257
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y+ +G
Sbjct: 16 RIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDG 75
Query: 67 RDVDGSRIIVEFAR 80
D DG R+ VEF R
Sbjct: 76 YDYDGYRLRVEFPR 89
>gi|348518702|ref|XP_003446870.1| PREDICTED: serine/arginine-rich splicing factor 1-like
[Oreochromis niloticus]
Length = 243
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDVEDVFYKYGIIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEFAR 80
D DG R+ VEF R
Sbjct: 77 YDYDGYRLRVEFPR 90
>gi|432889874|ref|XP_004075374.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oryzias
latipes]
Length = 245
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAF+EF DPRDADDA Y +G
Sbjct: 15 RIYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDG 74
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 75 YDYDGYRLRVEF 86
>gi|348505538|ref|XP_003440318.1| PREDICTED: serine/arginine-rich splicing factor 1-like
[Oreochromis niloticus]
Length = 244
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAF+EF DPRDADDA Y +G
Sbjct: 15 RIYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDG 74
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 75 YDYDGYRLRVEF 86
>gi|55742372|ref|NP_001006919.1| serine/arginine-rich splicing factor 1 [Xenopus (Silurana)
tropicalis]
gi|92058727|sp|Q6DII2.1|SRSF1_XENTR RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|49523075|gb|AAH75558.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) [Xenopus (Silurana)
tropicalis]
Length = 267
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEFAR 80
D DG R+ VEF R
Sbjct: 77 YDYDGYRLRVEFPR 90
>gi|47087630|ref|NP_998180.1| serine/arginine-rich splicing factor 1A [Danio rerio]
gi|33416587|gb|AAH55511.1| Splicing factor, arginine/serine-rich 1, like [Danio rerio]
Length = 245
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y+ +G
Sbjct: 16 RIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDG 75
Query: 67 RDVDGSRIIVEFAR 80
D DG R+ VEF R
Sbjct: 76 YDYDGYRLRVEFPR 89
>gi|321472329|gb|EFX83299.1| hypothetical protein DAPPUDRAFT_195083 [Daphnia pulex]
Length = 221
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 49/70 (70%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
GTR+Y+G L R + RD+E F YG++R+V +K + FVEF D RDADDA Y LNG+++
Sbjct: 2 GTRVYIGGLPYRVKERDIERFFRGYGKLREVLIKNGYGFVEFEDYRDADDAVYELNGKEL 61
Query: 70 DGSRIIVEFA 79
G R+ VE A
Sbjct: 62 CGERVSVEHA 71
>gi|148669918|gb|EDL01865.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_c
[Mus musculus]
Length = 212
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEFARGGPRGPGGSREYL 93
D DG R+ VEF R P P GS + L
Sbjct: 77 YDYDGYRLRVEFPRRLP--PSGSWQDL 101
>gi|221112062|ref|XP_002166415.1| PREDICTED: uncharacterized protein LOC100209098 [Hydra
magnipapillata]
Length = 257
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 68/115 (59%), Gaps = 17/115 (14%)
Query: 11 TRLYVGRL---ASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSL 64
+R+++G L ASRT +LE F GR+RDV + R+ F F+ F DPRDA+DA +
Sbjct: 2 SRIFIGGLPEDASRT---ELEREFECIGRLRDVWVARNPPGFGFIIFEDPRDAEDAVREM 58
Query: 65 NGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKA 119
+G+ + GSRI VE AR GGS RG + +C+NCG GH ++ C++
Sbjct: 59 DGKKICGSRIRVELARA---TTGGS-----RGRQIRNEKCYNCGKTGHLSKQCRS 105
>gi|291231291|ref|XP_002735598.1| PREDICTED: RNA binding motif protein 4B-like isoform 1
[Saccoglossus kowalevskii]
Length = 238
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 6 DRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLN 65
D T+++VG L+ +SRDL ++F +YG++ + D+ +++ FV +A +A +LN
Sbjct: 4 DLSNATKVFVGNLSKSVQSRDLRDLFEKYGKVLECDVIKNYGFVHMDKEDEAKEALDALN 63
Query: 66 GRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS-GRCFNCGIDGHWARDC 117
++ G+ I VE S + + P GS G CF CG GHW+RDC
Sbjct: 64 SKEFMGTNIKVEL----------STSRVHKTPGMGSKGECFKCGRQGHWSRDC 106
>gi|148706556|gb|EDL38503.1| mCG17902, isoform CRA_b [Mus musculus]
gi|149050601|gb|EDM02774.1| rCG61762, isoform CRA_c [Rattus norvegicus]
Length = 209
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|11527011|gb|AAG36874.1|AF242767_1 SF2 [Caenorhabditis elegans]
Length = 258
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 5/82 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
++YVG L R +++E+IF +YGRI+ VD+K FAFVEF D RDA+DA + +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 68 DVDGSRIIVEFARG-GPRGPGG 88
+ DG RI VEF RG GPRGP G
Sbjct: 70 EFDGRRIRVEFTRGVGPRGPSG 91
>gi|26383576|dbj|BAC25546.1| unnamed protein product [Mus musculus]
Length = 248
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 77 YDYDGYRLRVEF 88
>gi|55926178|ref|NP_001007487.1| serine/arginine-rich splicing factor 7 [Xenopus (Silurana)
tropicalis]
gi|51262158|gb|AAH79925.1| splicing factor, arginine/serine-rich 7, 35kDa [Xenopus (Silurana)
tropicalis]
Length = 234
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 72/143 (50%), Gaps = 26/143 (18%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDA 57
M RY G ++YVG L + +LE FS YG +R V + R+ FAFVEF D RDA
Sbjct: 1 MSRYGRYAGEAKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDTRDA 60
Query: 58 DDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 61 EDAVRGLDGKVICGSRVRVELSTGMPR-----RSRYDRPP----------------AR-- 97
Query: 118 KAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +CQ
Sbjct: 98 RPFDPSDRCYECGEKGHYAYDCQ 120
>gi|306966179|ref|NP_001182476.1| splicing factor, arginine/serine-rich 1B [Pan troglodytes]
gi|291405734|ref|XP_002719321.1| PREDICTED: splicing factor, arginine/serine-rich 1 [Oryctolagus
cuniculus]
gi|297272653|ref|XP_001103473.2| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 1
[Macaca mulatta]
gi|348562139|ref|XP_003466868.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 2
[Cavia porcellus]
gi|119614898|gb|EAW94492.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_g [Homo
sapiens]
Length = 253
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 77 YDYDGYRLRVEF 88
>gi|327262673|ref|XP_003216148.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Anolis carolinensis]
Length = 225
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 74/144 (51%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R PP
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPRRSRYDR-------PPAR--------------- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|291190420|ref|NP_001167114.1| Splicing factor, arginine/serine-rich 1 [Salmo salar]
gi|223648208|gb|ACN10862.1| Splicing factor, arginine/serine-rich 1 [Salmo salar]
Length = 251
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAF+EF DPRDADDA Y +G
Sbjct: 16 RIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDG 75
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 76 YDYDGYRLRVEF 87
>gi|389608975|dbj|BAM18099.1| hypothetical protein [Papilio xuthus]
Length = 145
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 69/116 (59%), Gaps = 5/116 (4%)
Query: 7 RYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYS 63
RYG ++YVG L + +LE+ FS YG +R+V + R+ FAFVEF DPRDA+DA
Sbjct: 3 RYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAIRG 62
Query: 64 LNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS-GRCFNCGIDGHWARDCK 118
L+GR + G R VE + G RG G R PP RC++CG GH+ARDC
Sbjct: 63 LDGRTICGRRARVEMSN-GSRGYGRGPPPRSRLPPRPYDDRCYDCGDRGHYARDCT 117
>gi|68035998|gb|AAY84875.1| alternative splicing regulator [Triticum aestivum]
Length = 254
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSL 64
G +YVG L R R++E++F +YG I D+D+K +AFVEF DPRDADDA Y
Sbjct: 6 GRTIYVGNLPEDIREREIEDLFCKYGPIVDIDLKIPPRPPVYAFVEFEDPRDADDAIYGR 65
Query: 65 NGRDVDGSRIIVEFARGGPRGPGGSR 90
+G D DG ++ VE A GG +GP R
Sbjct: 66 DGYDFDGCKLRVELAHGG-KGPSFDR 90
>gi|393247796|gb|EJD55303.1| hypothetical protein AURDEDRAFT_109681 [Auricularia delicata
TFB-10046 SS5]
Length = 523
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
++Y+G L +TR DL+ F + GRI +++K + FVEF A+++ +
Sbjct: 90 NKVYIGNLPEQTRESDLQSCFGKIGRIASIELKFGYGFVEFETQEAAEESVAKYHEGWFM 149
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCG 130
G++I VE +RG G+G PG+ CF CG GHWAR+C G N
Sbjct: 150 GNKIKVEISRG---------RNKGKGDQPGA--CFKCGQMGHWARECPHGGGTNGVSHHN 198
Query: 131 ERGH 134
GH
Sbjct: 199 GVGH 202
>gi|326495758|dbj|BAJ85975.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 255
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K +AFVEF DPRDADDA Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
D DG R+ VE A GG
Sbjct: 69 DFDGYRLRVELAHGG 83
>gi|242089655|ref|XP_002440660.1| hypothetical protein SORBIDRAFT_09g004726 [Sorghum bicolor]
gi|241945945|gb|EES19090.1| hypothetical protein SORBIDRAFT_09g004726 [Sorghum bicolor]
Length = 94
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMK-RDFAFVEFSDPRDADDARYSLNGRDV 69
T+LYVG ++ TR RDLE F RYGR+ V ++ R++ FV F DP+DAD AR L+G+++
Sbjct: 23 TKLYVGNMSRYTRERDLEAAFGRYGRLVTVYLQGRNYGFVVFYDPKDADAARNGLDGQEI 82
Query: 70 DGSRIIVEFAR 80
GS I V+FAR
Sbjct: 83 CGSHITVQFAR 93
>gi|291231293|ref|XP_002735599.1| PREDICTED: RNA binding motif protein 4B-like isoform 2
[Saccoglossus kowalevskii]
Length = 237
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 6 DRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLN 65
D T+++VG L+ +SRDL ++F +YG++ + D+ +++ FV +A +A +LN
Sbjct: 4 DLSNATKVFVGNLSKSVQSRDLRDLFEKYGKVLECDVIKNYGFVHMDKEDEAKEALDALN 63
Query: 66 GRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS-GRCFNCGIDGHWARDC 117
++ G+ I VE S + + P GS G CF CG GHW+RDC
Sbjct: 64 SKEFMGTNIKVEL----------STSRVHKTPGMGSKGECFKCGRQGHWSRDC 106
>gi|71834670|ref|NP_001025438.1| serine/arginine-rich splicing factor 7 [Danio rerio]
gi|66911407|gb|AAH97250.1| Splicing factor, arginine/serine-rich 7 [Danio rerio]
Length = 178
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 68/126 (53%), Gaps = 14/126 (11%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDA 57
M R+ G T++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA
Sbjct: 1 MSRFGRHGGETKVYVGNLGTGAGKGELERAFGYYGPLRSVWIARNPAGFAFVEFEDPRDA 60
Query: 58 DDARYSLNGRDVDGSRIIVEFARGGPR-----GPGGSREYLGRGPPPGSGRCFNCGIDGH 112
+D+ L+G+ + GSR+ VE + G PR P R P + RC+ CG GH
Sbjct: 61 EDSVRGLDGKVICGSRVRVELSTGMPRRSRYDHPPSRR------PFDPNDRCYECGEKGH 114
Query: 113 WARDCK 118
+A DC
Sbjct: 115 YAYDCH 120
>gi|51854465|gb|AAU10844.1| putative SF2/ASF splicing modulator Srp30 [Oryza sativa Japonica
Group]
Length = 145
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 52/79 (65%), Gaps = 6/79 (7%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K +AFVEF DPRDA DA Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRHGY 68
Query: 68 DVDGSRIIVEFARGGPRGP 86
D DG R+ VE A GG RGP
Sbjct: 69 DFDGHRLRVELAHGG-RGP 86
>gi|119614896|gb|EAW94490.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_e [Homo
sapiens]
Length = 142
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 77 YDYDGYRLRVEF 88
>gi|340506876|gb|EGR32928.1| splicing arginine serine-rich 4, putative [Ichthyophthirius
multifiliis]
Length = 243
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 19/110 (17%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMK----RDFAFVEFSDPRDADDARYSLNGR 67
+L++G L+ RDLE IF +YG ++++ +K + F+EF D RDA DA N
Sbjct: 24 KLFIGNLSKDADKRDLENIFKKYGTVKEIKIKATGSNHYGFIEFQDHRDAKDALDDCNNM 83
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+ G +I +EF GG R RE CFNCG H +DC
Sbjct: 84 EFKGKQIRLEFGHGGKR----RRE-----------NCFNCGYSNHATKDC 118
>gi|148669916|gb|EDL01863.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_a
[Mus musculus]
gi|149053806|gb|EDM05623.1| rCG34610, isoform CRA_b [Rattus norvegicus]
Length = 168
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 77 YDYDGYRLRVEF 88
>gi|15928796|gb|AAH14857.1| Sfrs7 protein [Mus musculus]
Length = 226
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|172046468|emb|CAQ34906.1| SR family splicing factor 9G8 [Chironomus tentans]
Length = 216
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L S +++E+ FS YG +R V + R+ FAFVEF D RDA+DA L+GR
Sbjct: 14 AKVYVGDLGSNADKQEIEDAFSYYGPLRSVWVARNPPGFAFVEFEDARDAEDAVRGLDGR 73
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+ G R VE + G SR GR P RC+ CG GH+ARDC
Sbjct: 74 TICGRRARVELSTGKSARGYRSRGGRGRSPGRREDRCYECGNRGHFARDC 123
>gi|197099026|ref|NP_001126337.1| serine/arginine-rich splicing factor 1 [Pongo abelii]
gi|68724975|sp|Q5R7H2.3|SRSF1_PONAB RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|55731147|emb|CAH92288.1| hypothetical protein [Pongo abelii]
Length = 248
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 77 YDYDGYRLRVEF 88
>gi|384489855|gb|EIE81077.1| hypothetical protein RO3G_05782 [Rhizopus delemar RA 99-880]
Length = 211
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 63/115 (54%), Gaps = 23/115 (20%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD-FAFVEFSDPRDADDARYSLNGRDVDG 71
L+V R+ +RDLE+ FS+YG+I ++KR+ F FVEF D RDA+DA + G
Sbjct: 3 LFVARIPRDMNNRDLEDAFSKYGKITRFEVKREGFGFVEFDDKRDAEDA---MKGIHETV 59
Query: 72 SRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCG------IDGHWARDCKAG 120
+ ++VE+A+ G G P C++CG + GH+ARDC+ G
Sbjct: 60 AELVVEWAKNG-------------GKRPSENECYHCGRSETYLLAGHYARDCREG 101
>gi|5902076|ref|NP_008855.1| serine/arginine-rich splicing factor 1 isoform 1 [Homo sapiens]
gi|34328400|ref|NP_775550.2| serine/arginine-rich splicing factor 1 isoform 1 [Mus musculus]
gi|83921643|ref|NP_001033096.1| serine/arginine-rich splicing factor 1 [Sus scrofa]
gi|115497078|ref|NP_001069862.1| serine/arginine-rich splicing factor 1 [Bos taurus]
gi|157818019|ref|NP_001103022.1| splicing factor, arginine/serine-rich 1B [Rattus norvegicus]
gi|306966181|ref|NP_001182477.1| splicing factor, arginine/serine-rich 1 [Equus caballus]
gi|306966183|ref|NP_001182478.1| splicing factor, arginine/serine-rich 1 [Macaca mulatta]
gi|73966540|ref|XP_866729.1| PREDICTED: serine/arginine-rich splicing factor 1 isoform 2
[Canis lupus familiaris]
gi|296202380|ref|XP_002748436.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 1
[Callithrix jacchus]
gi|332246407|ref|XP_003272345.1| PREDICTED: serine/arginine-rich splicing factor 1 [Nomascus
leucogenys]
gi|344285799|ref|XP_003414647.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Loxodonta
africana]
gi|397493084|ref|XP_003817443.1| PREDICTED: serine/arginine-rich splicing factor 1 [Pan paniscus]
gi|403279712|ref|XP_003931390.1| PREDICTED: serine/arginine-rich splicing factor 1 [Saimiri
boliviensis boliviensis]
gi|410980663|ref|XP_003996696.1| PREDICTED: serine/arginine-rich splicing factor 1 [Felis catus]
gi|426347344|ref|XP_004041313.1| PREDICTED: serine/arginine-rich splicing factor 1 [Gorilla
gorilla gorilla]
gi|730773|sp|Q07955.2|SRSF1_HUMAN RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Alternative-splicing factor 1; Short=ASF-1;
AltName: Full=Splicing factor, arginine/serine-rich 1;
AltName: Full=pre-mRNA-splicing factor SF2, P33 subunit
gi|68725069|sp|Q6PDM2.3|SRSF1_MOUSE RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=ASF/SF2; AltName: Full=Pre-mRNA-splicing factor
SRp30a; AltName: Full=Splicing factor,
arginine/serine-rich 1
gi|114152157|sp|Q3YLA6.3|SRSF1_PIG RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|122145605|sp|Q0VCY7.1|SRSF1_BOVIN RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|179075|gb|AAA35565.1| alternative [Homo sapiens]
gi|338047|gb|AAA03476.1| SF2p33 [Homo sapiens]
gi|16307434|gb|AAH10264.1| Splicing factor, arginine/serine-rich 1 [Homo sapiens]
gi|21104372|dbj|BAB93456.1| OK/SW-cl.3 [Homo sapiens]
gi|28386236|gb|AAH46773.1| Sfrs1 protein [Mus musculus]
gi|35192949|gb|AAH58627.1| Splicing factor, arginine/serine-rich 1 (ASF/SF2) [Mus musculus]
gi|61364743|gb|AAX42596.1| splicing factor arginine/serine-rich 1 [synthetic construct]
gi|73810229|gb|AAZ86088.1| splicing factor arginine/serine-rich 1 [Sus scrofa]
gi|73810231|gb|AAZ86089.1| splicing factor arginine/serine-rich 1 [Sus scrofa]
gi|74151692|dbj|BAE29641.1| unnamed protein product [Mus musculus]
gi|111306978|gb|AAI19931.1| Splicing factor, arginine/serine-rich 1 [Bos taurus]
gi|119614891|gb|EAW94485.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_a [Homo
sapiens]
gi|119614892|gb|EAW94486.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_a [Homo
sapiens]
gi|149053807|gb|EDM05624.1| rCG34610, isoform CRA_c [Rattus norvegicus]
gi|189053478|dbj|BAG35644.1| unnamed protein product [Homo sapiens]
gi|296477057|tpg|DAA19172.1| TPA: splicing factor, arginine/serine-rich 1 [Bos taurus]
gi|336088097|dbj|BAK39908.1| splicing factor, arginine/serine-rich 1, transcript variant 1
[Cricetulus griseus]
gi|344243483|gb|EGV99586.1| Splicing factor, arginine/serine-rich 1 [Cricetulus griseus]
gi|380784743|gb|AFE64247.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|383420721|gb|AFH33574.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|384941916|gb|AFI34563.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|410224700|gb|JAA09569.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410263644|gb|JAA19788.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410308964|gb|JAA33082.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351427|gb|JAA42317.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351431|gb|JAA42319.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|431890828|gb|ELK01707.1| Splicing factor, arginine/serine-rich 1 [Pteropus alecto]
Length = 248
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 77 YDYDGYRLRVEF 88
>gi|395845812|ref|XP_003795615.1| PREDICTED: serine/arginine-rich splicing factor 1 [Otolemur
garnettii]
Length = 312
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 81 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 140
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 141 YDYDGYRLRVEF 152
>gi|302695537|ref|XP_003037447.1| hypothetical protein SCHCODRAFT_104251 [Schizophyllum commune H4-8]
gi|300111144|gb|EFJ02545.1| hypothetical protein SCHCODRAFT_104251, partial [Schizophyllum
commune H4-8]
Length = 490
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 61/106 (57%), Gaps = 10/106 (9%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
++Y+G L TR+ DL+ F + G I ++++K + FVEF +P A ++ + G
Sbjct: 78 KVYIGGLPESTRTEDLKNCFGKLGAIVNIELKIGYGFVEFDNPEAAIESVNKYHEGYFMG 137
Query: 72 SRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
++I VE ++GG + SR + PGS CF CG+ GHWAR+C
Sbjct: 138 NKIRVEISKGGSK----SRHAMD----PGS--CFRCGVPGHWAREC 173
>gi|60811245|gb|AAX36166.1| splicing factor arginine/serine-rich 1 [synthetic construct]
Length = 249
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 77 YDYDGYRLRVEF 88
>gi|348515955|ref|XP_003445505.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Oreochromis niloticus]
Length = 258
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 45/60 (75%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL+ R RD+E+ F YGRIR++++K F FVEF D RDADDA Y LNG+++
Sbjct: 3 GCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGKEL 62
>gi|148669917|gb|EDL01864.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_b
[Mus musculus]
Length = 193
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 77 YDYDGYRLRVEF 88
>gi|328876774|gb|EGG25137.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 297
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 29/109 (26%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMK----RDFAFVEFSDPRDADDARYSLNGRD 68
LY+G+L++ T +DL ++FS+YG I D+K + FAF+EF + RDADDA +LN
Sbjct: 3 LYIGKLSNETNRKDLNDLFSKYGTITRNDVKQVGGKCFAFIEFKERRDADDAMKALN--- 59
Query: 69 VDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
E+A+G G + +CF C +GHW+++C
Sbjct: 60 --------EWAKG--------------GKAVVNNKCFTCNQEGHWSKEC 86
>gi|299755971|ref|XP_001829009.2| hypothetical protein CC1G_01689 [Coprinopsis cinerea okayama7#130]
gi|298411464|gb|EAU92644.2| hypothetical protein CC1G_01689 [Coprinopsis cinerea okayama7#130]
Length = 439
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
++Y+G L TR DL+ F + G+I ++++K + FVEF + A+++ +
Sbjct: 85 NKVYIGGLPEHTRQEDLQNCFGKIGKIVNIELKVGYGFVEFENREAAEESVEKYHEGYFM 144
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
G +I VE + GG G + +Y G G CF CG GHWAR+C
Sbjct: 145 GQKIRVELSHGG----GRTAKYAGE-----PGACFRCGQLGHWAREC 182
>gi|334322457|ref|XP_003340247.1| PREDICTED: serine/arginine-rich splicing factor 1-like
[Monodelphis domestica]
gi|395531888|ref|XP_003768005.1| PREDICTED: serine/arginine-rich splicing factor 1 [Sarcophilus
harrisii]
Length = 249
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 77 YDYDGYRLRVEF 88
>gi|82233969|sp|Q5ZML3.3|SRSF1_CHICK RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|53127294|emb|CAG31030.1| hypothetical protein RCJMB04_1l5 [Gallus gallus]
Length = 257
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 77 YDYDGYRLRVEF 88
>gi|150387449|gb|ABR68245.1| arginine/serine-rich 7 splicing factor [Cervus elaphus]
Length = 206
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 73/138 (52%), Gaps = 27/138 (19%)
Query: 7 RYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARY 62
RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRDA+DA
Sbjct: 1 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 60
Query: 63 SLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDW 122
L+G+ + GSR+ VE + G PR R R P AR + D
Sbjct: 61 GLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR--RPFDP 97
Query: 123 KNKCYRCGERGHIERNCQ 140
++CY CGE+GH +C
Sbjct: 98 NDRCYECGEKGHYAYDCH 115
>gi|440804043|gb|ELR24926.1| zinc knuckle domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 263
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 30 IFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGS 89
+F +YGRI D+K F FVE+ D RDA+DA L+G + G RI VE+A+G R G
Sbjct: 1 MFYKYGRIIRCDVKVGFGFVEYEDRRDAEDAVRDLDGAHLMGKRIAVEWAKGERRATGTR 60
Query: 90 REYLGRGPPPGSGRCFNCGIDGHWARDC 117
S CF CG +GHWARDC
Sbjct: 61 -----------SDACFRCGEEGHWARDC 77
>gi|225712990|gb|ACO12341.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290462763|gb|ADD24429.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290562097|gb|ADD38445.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 250
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 48/70 (68%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+YVG L R RD+E++F YGRIR+V +K + FVEF DPRDADD ++G++
Sbjct: 4 GSRVYVGNLPENVRERDVEKLFKEYGRIREVVIKSGYGFVEFDDPRDADDVVNDMDGKEF 63
Query: 70 DGSRIIVEFA 79
G R+ VE A
Sbjct: 64 QGGRVRVEMA 73
>gi|148706563|gb|EDL38510.1| mCG17902, isoform CRA_i [Mus musculus]
Length = 205
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|54291866|gb|AAV32234.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica
Group]
Length = 151
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 52/79 (65%), Gaps = 6/79 (7%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K +AFVEF DPRDA DA Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRHGY 68
Query: 68 DVDGSRIIVEFARGGPRGP 86
D DG R+ VE A GG RGP
Sbjct: 69 DFDGHRLRVELAHGG-RGP 86
>gi|166091440|ref|NP_001107213.1| serine/arginine-rich splicing factor 1 [Gallus gallus]
Length = 248
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 77 YDYDGYRLRVEF 88
>gi|328908705|gb|AEB61020.1| serine/arginine-rich splicing factor 7-like protein [Equus
caballus]
Length = 238
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 75/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + + FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIAGNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|118835441|gb|AAI28932.1| Sfrs1 protein [Xenopus laevis]
Length = 294
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 47 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 106
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 107 YDYDGYRLRVEF 118
>gi|402899743|ref|XP_003912847.1| PREDICTED: serine/arginine-rich splicing factor 1 [Papio anubis]
Length = 375
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 144 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 203
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 204 YDYDGYRLRVEF 215
>gi|198432071|ref|XP_002131223.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4
(Pre-mRNA-splicing factor SRP75) (SRP001LB) [Ciona
intestinalis]
Length = 277
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRD 68
G+R+++GRL++R D+E F +GRIR+V +K + FVEF + RDA+DA Y +N +
Sbjct: 17 AGSRVFIGRLSNRATESDVERFFKGFGRIREVKLKTGYGFVEFEENRDAEDAVYEMNNQS 76
Query: 69 VDGSRIIVEFARGGP 83
+ G R+ VE A+G P
Sbjct: 77 LCGERVTVEHAKGTP 91
>gi|417409273|gb|JAA51151.1| Putative splicing factor arginine/serine-rich 1-like protein,
partial [Desmodus rotundus]
Length = 278
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 47 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 106
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 107 YDYDGYRLRVEF 118
>gi|149050604|gb|EDM02777.1| rCG61762, isoform CRA_f [Rattus norvegicus]
Length = 207
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDCH 120
>gi|297849206|ref|XP_002892484.1| hypothetical protein ARALYDRAFT_470995 [Arabidopsis lyrata subsp.
lyrata]
gi|297338326|gb|EFH68743.1| hypothetical protein ARALYDRAFT_470995 [Arabidopsis lyrata subsp.
lyrata]
Length = 265
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 51/78 (65%), Gaps = 5/78 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YG I D+D+K +AFVEF DPRDADDA Y +G
Sbjct: 9 IYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 68 DVDGSRIIVEFARGGPRG 85
D DG R+ VE A GG RG
Sbjct: 69 DFDGCRLRVEIAHGGRRG 86
>gi|221220302|gb|ACM08812.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 256
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGRD 68
++YVG L + +LE FS YG +R V + R+ FAFVE+ DPRDA+DA ++G+
Sbjct: 16 KVYVGDLGNGAAKGELERAFSYYGPLRSVWVARNPPGFAFVEYEDPRDAEDATKGMDGKV 75
Query: 69 VDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+ GSRI VE + G R R P + RC+ CG GH+A DC
Sbjct: 76 LCGSRIRVELSTGMSRKSRYGRPSRRHFDP--NDRCYQCGESGHYAYDC 122
>gi|156394189|ref|XP_001636709.1| predicted protein [Nematostella vectensis]
gi|156223814|gb|EDO44646.1| predicted protein [Nematostella vectensis]
Length = 223
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 53/94 (56%), Gaps = 18/94 (19%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR------DFAFVEFSDPRDADDARYSLN 65
R+YVG L R +DL +IF +YG I DVD+K FAFVEF DPRDA+DA +
Sbjct: 10 RVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPPFAFVEFEDPRDAEDAVKGRD 69
Query: 66 GRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPP 99
G + DG RI VEF RGG GPPP
Sbjct: 70 GHEFDGYRIRVEFPRGGS------------GPPP 91
>gi|63101956|gb|AAH95586.1| Sfrs1 protein [Danio rerio]
gi|182889684|gb|AAI65510.1| Sfrs1 protein [Danio rerio]
Length = 258
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 51/72 (70%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMK-----RDFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K + FAFVEF DPRDA+DA Y +G
Sbjct: 16 RIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGQPFAFVEFEDPRDAEDAVYGRDG 75
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 76 YDYDGYRLRVEF 87
>gi|393218783|gb|EJD04271.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 465
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
++Y+G L TR DL+ F + G I ++++K + FVEF A+++ +
Sbjct: 78 NKVYIGGLPEHTRREDLQSCFGKIGEIVNIELKLGYGFVEFETREAAEESVAKYHEGFFM 137
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
G++I VE + GG G + +Y G G CF CG+ GHWAR+C
Sbjct: 138 GNKIRVEMSHGG----GRTAKYNGD-----PGACFKCGMTGHWAREC 175
>gi|330840365|ref|XP_003292187.1| hypothetical protein DICPUDRAFT_99253 [Dictyostelium purpureum]
gi|325077575|gb|EGC31278.1| hypothetical protein DICPUDRAFT_99253 [Dictyostelium purpureum]
Length = 288
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+++Y+GRL++ R D+ FS++G+I +++++ F FVE+ D ADDA S N +
Sbjct: 2 SKIYIGRLSNDARREDILNRFSKFGKIDKLELRKGFCFVEYLDKNAADDAINSENKQFFL 61
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
G I+VE S G GSG+CF C +GHWAR C
Sbjct: 62 GRDIVVEL----------SNSSRGIKKDIGSGKCFFCDEEGHWARSC 98
>gi|226504020|ref|NP_001150424.1| pre-mRNA-splicing factor SF2 [Zea mays]
gi|195639150|gb|ACG39043.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 263
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K +AFVEF DPRDADDA Y +G
Sbjct: 12 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 71
Query: 68 DVDGSRIIVEFARGG 82
+ DG R+ VE A GG
Sbjct: 72 NFDGYRLRVELAHGG 86
>gi|45433540|ref|NP_956887.2| serine/arginine-rich splicing factor 1B [Danio rerio]
gi|71162369|sp|Q6NYA0.1|SRS1B_DANRE RecName: Full=Serine/arginine-rich splicing factor 1B; AltName:
Full=Splicing factor, arginine/serine-rich 1; AltName:
Full=Splicing factor, arginine/serine-rich 1B
gi|44890669|gb|AAH66682.1| Splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) [Danio rerio]
Length = 245
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 16 RIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 75
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 76 YDYDGYRLRVEF 87
>gi|27503247|gb|AAH42354.1| Sfrs1 protein, partial [Xenopus laevis]
Length = 283
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 36 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 95
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 96 YDYDGYRLRVEF 107
>gi|179074|gb|AAA35564.1| alternative [Homo sapiens]
gi|119614894|gb|EAW94488.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_c [Homo
sapiens]
Length = 292
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 77 YDYDGYRLRVEF 88
>gi|118582269|ref|NP_001071634.1| serine/arginine-rich splicing factor 1 isoform 2 [Homo sapiens]
gi|45708738|gb|AAH33785.1| SFRS1 protein [Homo sapiens]
gi|119614895|gb|EAW94489.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_d [Homo
sapiens]
gi|168277706|dbj|BAG10831.1| splicing factor, arginine/serine-rich 1 [synthetic construct]
gi|410263646|gb|JAA19789.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410308966|gb|JAA33083.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351429|gb|JAA42318.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
Length = 201
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 77 YDYDGYRLRVEF 88
>gi|426241491|ref|XP_004014624.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1 [Ovis
aries]
Length = 344
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ ++D+K + FVEF D RDADDA Y N + + G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYEPNAK-LCG 61
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 62 ERVIVEHARG 71
>gi|351713363|gb|EHB16282.1| Splicing factor, arginine/serine-rich 1 [Heterocephalus glaber]
Length = 292
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 77 YDYDGYRLRVEF 88
>gi|170085409|ref|XP_001873928.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651480|gb|EDR15720.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 477
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 13/147 (8%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
++Y+G L TR DL+ F + G I ++++K + FVEF A+++ + G
Sbjct: 122 KVYIGGLPEHTRQEDLQSCFGKIGIITNIELKVGYGFVEFDTREAAEESVAKYHEGFFMG 181
Query: 72 SRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGE 131
++I VE + GG G + +Y G G CF CG GHWAR+C +
Sbjct: 182 NKIRVELSHGG----GRTAKYAG-----DPGACFKCGQMGHWARECP----NHTGLAPQR 228
Query: 132 RGHIERNCQNSPKKLRPRSYSRSPSPR 158
R HIE + ++ P +R P PR
Sbjct: 229 RHHIESPLIDRIQREHPVHPARLPLPR 255
>gi|426236979|ref|XP_004023550.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1 [Ovis aries]
Length = 190
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRXGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 77 YDYDGYRLRVEF 88
>gi|158260889|dbj|BAF82622.1| unnamed protein product [Homo sapiens]
Length = 248
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DP+DA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPQDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 77 YDYDGYRLRVEF 88
>gi|114108043|gb|AAI23123.1| Sfrs1 protein [Xenopus laevis]
Length = 296
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 49 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 108
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 109 YDYDGYRLRVEF 120
>gi|348562137|ref|XP_003466867.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 1
[Cavia porcellus]
gi|380788319|gb|AFE66035.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
gi|383420723|gb|AFH33575.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
gi|384941914|gb|AFI34562.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
Length = 201
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 77 YDYDGYRLRVEF 88
>gi|354472029|ref|XP_003498243.1| PREDICTED: serine/arginine-rich splicing factor 1 [Cricetulus
griseus]
Length = 201
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 77 YDYDGYRLRVEF 88
>gi|357131986|ref|XP_003567614.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 262
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K +AFVEF DPRDADDA Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
+ DG R+ VE A GG
Sbjct: 69 NFDGYRLRVELAHGG 83
>gi|336088099|dbj|BAK39909.1| splicing factor, arginine/serine-rich 1, transcript variant 2
[Cricetulus griseus]
Length = 201
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 77 YDYDGYRLRVEF 88
>gi|118582271|ref|NP_001071635.1| serine/arginine-rich splicing factor 1 isoform 2 [Mus musculus]
gi|26347437|dbj|BAC37367.1| unnamed protein product [Mus musculus]
Length = 201
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 77 YDYDGYRLRVEF 88
>gi|426241493|ref|XP_004014625.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2 [Ovis
aries]
Length = 339
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YGR+ ++D+K + FVEF D RDADDA Y N + + G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYEPNAK-LCG 61
Query: 72 SRIIVEFARG 81
R+IVE ARG
Sbjct: 62 ERVIVEHARG 71
>gi|417397107|gb|JAA45587.1| Putative serine/arginine-rich splicing factor 1 isoform 2
[Desmodus rotundus]
Length = 207
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 77 YDYDGYRLRVEF 88
>gi|326915074|ref|XP_003203846.1| PREDICTED: hypothetical protein LOC100542161 [Meleagris gallopavo]
Length = 273
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 69/133 (51%), Gaps = 26/133 (19%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRDA+DA L+G+
Sbjct: 44 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 103
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCY 127
+ GSR+ VE + G PR R R P AR + D ++CY
Sbjct: 104 VICGSRVRVEVSTGMPR-----RSRYDRPP----------------AR--RPFDPNDRCY 140
Query: 128 RCGERGHIERNCQ 140
CGE+GH +C
Sbjct: 141 ECGEKGHYAYDCH 153
>gi|448878368|gb|AGE46147.1| arginine/serine-rich splicing factor SR30 transcript VI [Sorghum
bicolor]
Length = 237
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSL 64
G +YVG L R R+++++F +YGRI ++D+K FAFVEF DP DA+DA Y
Sbjct: 6 GCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAEDAIYGR 65
Query: 65 NGRDVDGSRIIVEFARGGPRGP 86
+G + DG R+ VE A GG RGP
Sbjct: 66 DGYNFDGHRLRVELAHGG-RGP 86
>gi|414877279|tpg|DAA54410.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 272
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K +AFVEF DPRDADDA Y +G
Sbjct: 12 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 71
Query: 68 DVDGSRIIVEFARGG 82
+ DG R+ VE A GG
Sbjct: 72 NFDGYRLRVELAHGG 86
>gi|194696448|gb|ACF82308.1| unknown [Zea mays]
gi|414877280|tpg|DAA54411.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
Length = 263
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K +AFVEF DPRDADDA Y +G
Sbjct: 12 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 71
Query: 68 DVDGSRIIVEFARGG 82
+ DG R+ VE A GG
Sbjct: 72 NFDGYRLRVELAHGG 86
>gi|392571790|gb|EIW64962.1| hypothetical protein TRAVEDRAFT_55734 [Trametes versicolor
FP-101664 SS1]
Length = 490
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
++Y+G L TR DLE F + G I ++++K + FVEF + A+++ + G
Sbjct: 98 KVYIGGLPEHTRKEDLESCFGKIGNIVNIELKVGYGFVEFDNREAAEESVAKYHEGYFMG 157
Query: 72 SRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
++I VE + GG G + +Y G G CF CG GHWAR+C
Sbjct: 158 NKIRVEISHGG----GRTAKYSG-----DPGACFKCGQMGHWAREC 194
>gi|221130958|ref|XP_002164143.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Hydra magnipapillata]
Length = 264
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 11 TRLYVGRLASRTRSRDLEEIF--SRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRD 68
R++VGRL R RDLE F + + R++DV++K +AFVEF D RDADDA Y L+ ++
Sbjct: 10 NRIFVGRLNPEARVRDLENFFKDNGFSRLKDVNIKLGYAFVEFEDKRDADDAVYELDRKE 69
Query: 69 VDGSRIIVEFARGGPRG 85
GSR+ VE A+ GPR
Sbjct: 70 FFGSRLTVEHAKHGPRA 86
>gi|330795349|ref|XP_003285736.1| hypothetical protein DICPUDRAFT_76661 [Dictyostelium purpureum]
gi|325084284|gb|EGC37715.1| hypothetical protein DICPUDRAFT_76661 [Dictyostelium purpureum]
Length = 224
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 15/109 (13%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+YVGR++ +T + LE+ F+++GR+ D+K +AFVEF + + A +A ++ VDG
Sbjct: 129 RVYVGRISQKTTRQSLEDAFTKFGRVLSCDVKNGYAFVEFDNDKSAREAIEEMHDSMVDG 188
Query: 72 SRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
+I+VE + G + P CF C GHWAR C G
Sbjct: 189 EKILVEKSHSGKKHP---------------DECFICRGRGHWARSCPKG 222
>gi|62088696|dbj|BAD92795.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) variant [Homo sapiens]
Length = 233
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 49 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 108
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 109 YDYDGYRLRVEF 120
>gi|52140009|gb|AAU29331.1| ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
gi|414877275|tpg|DAA54406.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 isoform 1 [Zea
mays]
gi|414877276|tpg|DAA54407.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 isoform 2 [Zea
mays]
Length = 260
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K +AFVEF DPRDADDA Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
+ DG R+ VE A GG
Sbjct: 69 NFDGYRLRVELAHGG 83
>gi|34785174|gb|AAH56752.1| Sfrs1 protein [Danio rerio]
Length = 188
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 16 RIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 75
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 76 YDYDGYRLRVEF 87
>gi|348518531|ref|XP_003446785.1| PREDICTED: serine/arginine-rich splicing factor 1-like
[Oreochromis niloticus]
Length = 264
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L RS+D+E++F +YG IRD+D+K FAFV+F DPRDA+DA Y +G
Sbjct: 16 RIYVGNLPPDIRSKDVEDLFYKYGSIRDIDLKNRRGGPPFAFVQFDDPRDAEDAVYGRDG 75
Query: 67 RDVDGSRIIVEFAR 80
D DG R+ VEF R
Sbjct: 76 YDYDGYRLRVEFPR 89
>gi|209155708|gb|ACI34086.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 129
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 66/121 (54%), Gaps = 4/121 (3%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDA 57
M R+ G ++YVG L + +LE F YG +R V + R+ FAFVEF D RDA
Sbjct: 1 MSRHGRNGGDAKVYVGNLGTGAGKGELERAFGYYGPLRTVWIARNPPGFAFVEFEDTRDA 60
Query: 58 DDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+DA L+G+ + GSR+ VE + G PR R R P + +C+ CG GH+A DC
Sbjct: 61 EDAVRGLDGKLISGSRVRVELSTGMPRRSRYERAPTNR-PFDSNDKCYECGERGHYAYDC 119
Query: 118 K 118
Sbjct: 120 H 120
>gi|448878366|gb|AGE46146.1| arginine/serine-rich splicing factor SR30 transcript V [Sorghum
bicolor]
Length = 278
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSL 64
G +YVG L R R+++++F +YGRI ++D+K FAFVEF DP DA+DA Y
Sbjct: 6 GCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAEDAIYGR 65
Query: 65 NGRDVDGSRIIVEFARGGPRGP 86
+G + DG R+ VE A GG RGP
Sbjct: 66 DGYNFDGHRLRVELAHGG-RGP 86
>gi|448878372|gb|AGE46149.1| arginine/serine-rich splicing factor SR27 transcript II [Sorghum
bicolor]
Length = 165
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K +AFVEF DPRDADDA Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
+ DG R+ VE A GG
Sbjct: 69 NFDGYRLRVELAHGG 83
>gi|414877278|tpg|DAA54409.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 254
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K +AFVEF DPRDADDA Y +G
Sbjct: 12 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 71
Query: 68 DVDGSRIIVEFARGG 82
+ DG R+ VE A GG
Sbjct: 72 NFDGYRLRVELAHGG 86
>gi|448878370|gb|AGE46148.1| arginine/serine-rich splicing factor SR27 transcript I [Sorghum
bicolor]
Length = 230
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K +AFVEF DPRDADDA Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
+ DG R+ VE A GG
Sbjct: 69 NFDGYRLRVELAHGG 83
>gi|432898455|ref|XP_004076510.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oryzias
latipes]
Length = 222
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L RS+D+E++F +YG IRD+D+K FAFV+F DPRDA+DA Y +G
Sbjct: 16 RIYVGNLPPDIRSKDVEDLFYKYGSIRDIDLKNRRGGPPFAFVQFEDPRDAEDAVYGRDG 75
Query: 67 RDVDGSRIIVEFAR 80
D DG R+ VEF R
Sbjct: 76 YDYDGYRLRVEFPR 89
>gi|149422794|ref|XP_001506905.1| PREDICTED: serine/arginine-rich splicing factor 7-like, partial
[Ornithorhynchus anatinus]
Length = 228
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 26/132 (19%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRDA+DA L+G+
Sbjct: 1 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 60
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCY 127
+ GSR+ VE + G PR R R P AR + D ++CY
Sbjct: 61 VICGSRVRVELSTGMPR-----RSRYDRPP----------------AR--RPFDPNDRCY 97
Query: 128 RCGERGHIERNC 139
CGE+GH +C
Sbjct: 98 ECGEKGHYAYDC 109
>gi|391343504|ref|XP_003746049.1| PREDICTED: serine-arginine protein 55-like [Metaseiulus
occidentalis]
Length = 296
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%)
Query: 8 YGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGR 67
G R+++GRL +R +D+E+ FSR GRIR + +KR +AFV+F RDA DA + +NGR
Sbjct: 1 MSGNRVFIGRLPRGSREQDIEKFFSRCGRIRGIMLKRGYAFVDFRTDRDASDAVHDMNGR 60
Query: 68 DVDGSRIIVEFARG 81
+ G R+ VE A G
Sbjct: 61 SMRGERMTVEIASG 74
>gi|449672696|ref|XP_004207773.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Hydra
magnipapillata]
Length = 115
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 63/111 (56%), Gaps = 14/111 (12%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
+R+++G L +LE+ F +GR+RDV + R+ F F+ F D RDA+DA ++G+
Sbjct: 2 SRIFIGGLPEDASRNELEKEFESFGRLRDVWVARNPPGFGFIIFEDARDAEDAVREMDGK 61
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCK 118
V GSRI VEFARG G G E +C+NC GH +RDC+
Sbjct: 62 RVCGSRIRVEFARGPATGRKGREE-----------KCYNCNKFGHMSRDCR 101
>gi|224032703|gb|ACN35427.1| unknown [Zea mays]
gi|414877277|tpg|DAA54408.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 234
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K +AFVEF DPRDADDA Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
+ DG R+ VE A GG
Sbjct: 69 NFDGYRLRVELAHGG 83
>gi|66814388|ref|XP_641373.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60469429|gb|EAL67423.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 412
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 43/156 (27%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+YVGR++++T LE+ F ++G++ D+K +AFVEF + + A DA ++ VDG
Sbjct: 176 RVYVGRISNKTTRESLEDSFLKFGKVLSCDVKNGYAFVEFDNEKSARDAIEEMHDSIVDG 235
Query: 72 SRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC-------------- 117
+I+VE + G + P CF C GHWAR C
Sbjct: 236 EKILVEKSHSGKKHPD---------------ECFICRGRGHWARSCPKGGRGRDGRDRDY 280
Query: 118 -------------KAGDWKNK-CYRCGERGHIERNC 139
+ G +N+ C+ C GHI ++C
Sbjct: 281 RDNRDRDRDREREREGHLRNRTCFTCNGVGHIAKDC 316
>gi|74192738|dbj|BAE34886.1| unnamed protein product [Mus musculus]
Length = 222
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 54/88 (61%), Gaps = 11/88 (12%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYS 63
G R+YVG L S R RDLE++F +YGRIR++++K FAFV F DPRDA+DA Y
Sbjct: 13 GDGRIYVGNLPSDVRERDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYG 72
Query: 64 LNGRDVDGSRIIVEFAR------GGPRG 85
NG D R+ VEF R G PRG
Sbjct: 73 RNGYDYGQCRLRVEFPRTYGGRGGWPRG 100
>gi|194386188|dbj|BAG59658.1| unnamed protein product [Homo sapiens]
Length = 226
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 75/143 (52%), Gaps = 28/143 (19%)
Query: 1 MPRYDDRYGG-TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRD 56
M RY RYGG T++YVG L + +LE FS YG +R V + R+ FAFVEF PRD
Sbjct: 1 MSRYG-RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEGPRD 59
Query: 57 ADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARD 116
A+DA L+G+ + GSR+ VE + G PR R R P AR
Sbjct: 60 AEDAVRGLDGKVICGSRVRVELSTGMPR-----RSRFDRPP----------------AR- 97
Query: 117 CKAGDWKNKCYRCGERGHIERNC 139
+ D ++CY CGE+GH +C
Sbjct: 98 -RPFDPNDRCYECGEKGHYAYDC 119
>gi|414877281|tpg|DAA54412.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
Length = 244
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K +AFVEF DPRDADDA Y +G
Sbjct: 12 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 71
Query: 68 DVDGSRIIVEFARGG 82
+ DG R+ VE A GG
Sbjct: 72 NFDGYRLRVELAHGG 86
>gi|339239261|ref|XP_003381185.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
gi|316975801|gb|EFV59199.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
Length = 646
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 47/70 (67%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
TR+YVG+L S R DLE F YGRIR++ +K + FVEF + RDADDA + LNG+ +
Sbjct: 4 TRVYVGQLTSDIRENDLENFFKGYGRIREITLKNGYGFVEFDERRDADDAVHDLNGKPLL 63
Query: 71 GSRIIVEFAR 80
G +I VE A
Sbjct: 64 GEKIRVEMAH 73
>gi|327282648|ref|XP_003226054.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Anolis
carolinensis]
Length = 245
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD-----FAFVEFSDPRDADDARYSLNG 66
R+YVG L + R +DLEE+F +YGRIRD+++K FAFV F DPRDA+DA Y NG
Sbjct: 37 RIYVGNLPANVREKDLEELFYKYGRIRDIELKSKRGLVPFAFVRFEDPRDAEDAVYGRNG 96
Query: 67 RDVDGSRIIVEF 78
D R+ VEF
Sbjct: 97 YDYGQCRLRVEF 108
>gi|198422995|ref|XP_002122454.1| PREDICTED: zinc finger (CCHC)-24 isoform 2 [Ciona intestinalis]
Length = 205
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 67/132 (50%), Gaps = 26/132 (19%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
T++YVG L+S T DLE F YGR+ +V + + FA+VEF DPRDADDA L+G+
Sbjct: 5 TKIYVGNLSSSTTRGDLEYEFEYYGRLINVWVAKSPPGFAYVEFEDPRDADDAIKGLDGK 64
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCY 127
++ G RI VE + G PR G R+ R P ++CY
Sbjct: 65 ELHGRRIRVERSHGMPRNRGSDRDRSRRAFHP-----------------------SDRCY 101
Query: 128 RCGERGHIERNC 139
CGE GH +C
Sbjct: 102 NCGETGHYAYDC 113
>gi|328724546|ref|XP_003248181.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 3
[Acyrthosiphon pisum]
gi|328724548|ref|XP_003248182.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 4
[Acyrthosiphon pisum]
Length = 137
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 74/132 (56%), Gaps = 24/132 (18%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L S +DLE+ FS YG IR+V + R+ FAFVEF DPRDA+DA L+GR
Sbjct: 15 CKIYVGDLGSSASKQDLEDAFSYYGSIRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGR 74
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCY 127
+ G R+ VE + G SR+ RG PP GR F+ ++KCY
Sbjct: 75 SICGRRVRVELSNAG------SRKGAYRGGPPRRGRPFH---------------PEDKCY 113
Query: 128 RCGERGHIERNC 139
CG+RGH R+C
Sbjct: 114 ECGDRGHYARDC 125
>gi|52140010|gb|AAU29332.1| ASF/SF2-like pre-mRNA splicing factor SRP30' [Zea mays]
Length = 241
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K +AFVEF DPRDADDA Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
+ DG R+ VE A GG
Sbjct: 69 NFDGYRLRVELAHGG 83
>gi|354488931|ref|XP_003506619.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Cricetulus
griseus]
Length = 227
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 69/133 (51%), Gaps = 26/133 (19%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRDA+DA L+G+
Sbjct: 3 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 62
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCY 127
+ GSR+ VE + G PR R R P AR + D ++CY
Sbjct: 63 VICGSRVRVELSTGMPR-----RSRFDRPP----------------AR--RPFDPNDRCY 99
Query: 128 RCGERGHIERNCQ 140
CGE+GH +C
Sbjct: 100 ECGEKGHYAYDCH 112
>gi|126631485|gb|AAI33852.1| Sfrs7 protein [Danio rerio]
Length = 210
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 71/143 (49%), Gaps = 26/143 (18%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDA 57
M R+ G T++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA
Sbjct: 1 MSRFGRHGGETKVYVGNLGTGAGKGELERAFGYYGPLRSVWIARNPAGFAFVEFEDPRDA 60
Query: 58 DDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+D+ L+G+ + GSR+ VE + G PR R P S R F
Sbjct: 61 EDSVRGLDGKVICGSRVRVELSTGMPR--------RSRYDHPPSRRPF------------ 100
Query: 118 KAGDWKNKCYRCGERGHIERNCQ 140
D ++CY CGE+GH +C
Sbjct: 101 ---DPNDRCYECGEKGHYAYDCH 120
>gi|268563921|ref|XP_002647045.1| C. briggsae CBR-RSP-3 protein [Caenorhabditis briggsae]
Length = 234
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%), Gaps = 5/80 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
++YVG L + R +++E+IF +YGRI+ +D+K FAF+EF D RDA+DA + +G
Sbjct: 9 KVYVGNLPADVRDKEVEDIFHKYGRIKYIDVKSGRGPAFAFIEFEDNRDAEDAVRARDGY 68
Query: 68 DVDGSRIIVEFARG-GPRGP 86
+ DG RI VEF RG GPRGP
Sbjct: 69 EFDGRRIRVEFTRGVGPRGP 88
>gi|242052807|ref|XP_002455549.1| hypothetical protein SORBIDRAFT_03g013010 [Sorghum bicolor]
gi|241927524|gb|EES00669.1| hypothetical protein SORBIDRAFT_03g013010 [Sorghum bicolor]
Length = 186
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K +AFVEF DPRDADDA Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
+ DG R+ VE A GG
Sbjct: 69 NFDGYRLRVELAHGG 83
>gi|383850973|ref|XP_003701038.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Megachile
rotundata]
Length = 206
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 72/144 (50%), Gaps = 30/144 (20%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDA 57
MPRY ++YVG L S +LE+ FS YG +R+V + R+ FAFVEF D RDA
Sbjct: 4 MPRYPS---DCKVYVGDLGSSATKEELEDAFSYYGSLRNVWVARNPPGFAFVEFEDARDA 60
Query: 58 DDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPP-GSGRCFNCGIDGHWARD 116
+DA L+GR + G R VE P R RG G GR F+
Sbjct: 61 EDAIRGLDGRIICGRRARVE--------PSNGRRLRDRGYFRRGIGRLFH---------- 102
Query: 117 CKAGDWKNKCYRCGERGHIERNCQ 140
+++CY CGE+GH RNCQ
Sbjct: 103 -----PEDRCYECGEKGHYARNCQ 121
>gi|148706557|gb|EDL38504.1| mCG17902, isoform CRA_c [Mus musculus]
Length = 266
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 69/133 (51%), Gaps = 26/133 (19%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRDA+DA L+G+
Sbjct: 39 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 98
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCY 127
+ GSR+ VE + G PR R R P AR + D ++CY
Sbjct: 99 VICGSRVRVELSTGMPR-----RSRFDRPP----------------AR--RPFDPNDRCY 135
Query: 128 RCGERGHIERNCQ 140
CGE+GH +C
Sbjct: 136 ECGEKGHYAYDCH 148
>gi|125977312|ref|XP_001352689.1| GA21193 [Drosophila pseudoobscura pseudoobscura]
gi|54641438|gb|EAL30188.1| GA21193 [Drosophila pseudoobscura pseudoobscura]
Length = 352
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 15/110 (13%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
T+++VG L +TR+ ++ E+F +YG + + D+ R++ FV D DA LNGR VD
Sbjct: 86 TKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRNYGFVHLDCVGDVQDAIKELNGRVVD 145
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSG---RCFNCGIDGHWARDC 117
G + V+ + R P PG G +C+ CG GHW+++C
Sbjct: 146 GQPLKVQVSTSRVR------------PKPGMGDPEQCYRCGRSGHWSKEC 183
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 42/72 (58%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRD 68
G +L++G L +T++ +L +F +YG + + D+ +++ FV + DA +LNG
Sbjct: 5 GTFKLFIGNLDEKTQATELRALFEKYGTVVECDVVKNYGFVHMETEQQGRDAIQNLNGYV 64
Query: 69 VDGSRIIVEFAR 80
++ + I VE A+
Sbjct: 65 LNDNAIKVEAAK 76
>gi|221130960|ref|XP_002164119.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Hydra magnipapillata]
Length = 264
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 12 RLYVGRLASRTRSRDLEEIF--SRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
R++VGRL R RDLE F + + R++DV++K +AFVEF D RDADDA Y L+ ++
Sbjct: 11 RIFVGRLNPEARVRDLENFFKDNGFSRLKDVNIKLGYAFVEFEDKRDADDAVYELDRKEF 70
Query: 70 DGSRIIVEFARGGPRG 85
GSRI VE A G RG
Sbjct: 71 FGSRITVEHATGTARG 86
>gi|158293128|ref|XP_314469.4| AGAP010496-PA [Anopheles gambiae str. PEST]
gi|157016810|gb|EAA09889.4| AGAP010496-PA [Anopheles gambiae str. PEST]
Length = 258
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 6/83 (7%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
R+YVG L R++D++++F ++G++ VD+K FAFVEF D RDADDA + +G
Sbjct: 9 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 68
Query: 68 DVDGSRIIVEFARGGPRGPGGSR 90
D DG R+ VEF RGG GPG R
Sbjct: 69 DYDGYRLRVEFPRGG--GPGSYR 89
>gi|17647581|ref|NP_523957.1| lark, isoform A [Drosophila melanogaster]
gi|24659966|ref|NP_729237.1| lark, isoform B [Drosophila melanogaster]
gi|24659971|ref|NP_729238.1| lark, isoform C [Drosophila melanogaster]
gi|24659976|ref|NP_729239.1| lark, isoform D [Drosophila melanogaster]
gi|24659981|ref|NP_729240.1| lark, isoform E [Drosophila melanogaster]
gi|62510825|sp|Q94901.1|LARK_DROME RecName: Full=RNA-binding protein lark
gi|1518654|gb|AAB07067.1| RNA-binding protein lark [Drosophila melanogaster]
gi|7295256|gb|AAF50578.1| lark, isoform A [Drosophila melanogaster]
gi|16769574|gb|AAL29006.1| LD40792p [Drosophila melanogaster]
gi|23094008|gb|AAN12053.1| lark, isoform B [Drosophila melanogaster]
gi|23094009|gb|AAN12054.1| lark, isoform C [Drosophila melanogaster]
gi|23094010|gb|AAN12055.1| lark, isoform D [Drosophila melanogaster]
gi|23094011|gb|AAN12056.1| lark, isoform E [Drosophila melanogaster]
gi|220946850|gb|ACL85968.1| lark-PA [synthetic construct]
gi|220956448|gb|ACL90767.1| lark-PA [synthetic construct]
Length = 352
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 15/110 (13%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
T+++VG L +TR+ ++ E+F +YG + + D+ R++ FV D DA LNGR VD
Sbjct: 86 TKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRNYGFVHLDCVGDVQDAIKELNGRVVD 145
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSG---RCFNCGIDGHWARDC 117
G + V+ + R P PG G +C+ CG GHW+++C
Sbjct: 146 GQPLKVQVSTSRVR------------PKPGMGDPEQCYRCGRSGHWSKEC 183
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 41/72 (56%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRD 68
G +L++G L +T++ +L +F +YG + + D+ +++ FV + DA +LNG
Sbjct: 5 GTFKLFIGNLDEKTQATELRALFEKYGTVVECDVVKNYGFVHMETEQQGRDAIQNLNGYT 64
Query: 69 VDGSRIIVEFAR 80
++ I VE A+
Sbjct: 65 LNEFAIKVEAAK 76
>gi|403351671|gb|EJY75331.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
gi|403370539|gb|EJY85135.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 343
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 9/108 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRD-V 69
T++YV L RTR DL++ FS++GRI+ + +K ++AF+++ + DA A +NG+ V
Sbjct: 94 TQVYVAGLHRRTREDDLKDSFSKFGRIKQLVLKHNYAFIDYENHEDAVAALREMNGKTFV 153
Query: 70 DGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+G + VE + PGG + G P C+NC GHWA +C
Sbjct: 154 NGEELAVEQSV-----PGGKKRKSG---PKREDVCYNCQKPGHWANEC 193
>gi|224046923|ref|XP_002199213.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Taeniopygia
guttata]
Length = 223
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 69/133 (51%), Gaps = 26/133 (19%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRDA+DA L+G+
Sbjct: 9 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVLGLDGK 68
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCY 127
+ GSR+ VE + G PR R R P AR + D ++CY
Sbjct: 69 IICGSRVRVEVSTGMPR-----RSRYDRPP----------------AR--RPFDPNDRCY 105
Query: 128 RCGERGHIERNCQ 140
CGE+GH +C
Sbjct: 106 ECGEKGHYAYDCH 118
>gi|71897353|ref|NP_001026539.1| serine/arginine-rich splicing factor 7 [Gallus gallus]
gi|53127360|emb|CAG31063.1| hypothetical protein RCJMB04_1p22 [Gallus gallus]
Length = 223
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 69/133 (51%), Gaps = 26/133 (19%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRDA+DA L+G+
Sbjct: 9 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVLGLDGK 68
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCY 127
+ GSR+ VE + G PR R R P AR + D ++CY
Sbjct: 69 IICGSRVRVEVSTGMPR-----RSRYDRPP----------------AR--RPFDPNDRCY 105
Query: 128 RCGERGHIERNCQ 140
CGE+GH +C
Sbjct: 106 ECGEKGHYAYDCH 118
>gi|71162370|sp|Q8BL97.1|SRSF7_MOUSE RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor, arginine/serine-rich 7
gi|26337671|dbj|BAC32521.1| unnamed protein product [Mus musculus]
Length = 267
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 69/133 (51%), Gaps = 26/133 (19%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRDA+DA L+G+
Sbjct: 40 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 99
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCY 127
+ GSR+ VE + G PR R R P AR + D ++CY
Sbjct: 100 VICGSRVRVELSTGMPR-----RSRFDRPP----------------AR--RPFDPNDRCY 136
Query: 128 RCGERGHIERNCQ 140
CGE+GH +C
Sbjct: 137 ECGEKGHYAYDCH 149
>gi|290562251|gb|ADD38522.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 331
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-DFAFVEFSDPRDADDARYSLNGRD 68
G R+++G L R RD+E F RYGR+ ++ +K + F EF D RDADDA Y LNG +
Sbjct: 6 GCRVFLGNLPYSVRERDIERFFERYGRVYNIFIKSGKYGFCEFDDYRDADDAVYKLNGCE 65
Query: 69 VDGSRIIVEFARGGPRG 85
++ RI VE ARGG R
Sbjct: 66 LNSERITVEHARGGRRA 82
>gi|225712276|gb|ACO11984.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 329
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-DFAFVEFSDPRDADDARYSLNGRD 68
G R+++G L R RD+E F RYGR+ ++ +K + F EF D RDADDA Y LNG +
Sbjct: 6 GCRVFLGNLPYSVRERDIERFFERYGRVYNIFIKSGKYGFCEFDDYRDADDAVYKLNGCE 65
Query: 69 VDGSRIIVEFARGGPRG 85
++ RI VE ARGG R
Sbjct: 66 LNSERITVEHARGGRRA 82
>gi|68037673|gb|AAY84884.1| alternative splicing regulator [Triticum aestivum]
Length = 284
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 51/75 (68%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI ++D+K FAFVEF DPRDA+DA + +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIHGRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
+ DG+R+ VE A GG
Sbjct: 69 NFDGNRLRVELAHGG 83
>gi|357121520|ref|XP_003562467.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 288
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 51/75 (68%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI ++D+K FAFVEF DPRDA+DA + +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIHGRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
+ DG+R+ VE A GG
Sbjct: 69 NFDGNRLRVELAHGG 83
>gi|110767678|ref|XP_001122800.1| PREDICTED: serine/arginine-rich splicing factor 7 [Apis mellifera]
gi|380013414|ref|XP_003690755.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
florea]
Length = 206
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 70/133 (52%), Gaps = 25/133 (18%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L S ++LE+ FS YG +R+V + R+ FAFVEF D RDA+DA L+GR
Sbjct: 11 CKVYVGDLGSGATKQELEDAFSYYGSLRNVWVARNPPGFAFVEFEDARDAEDAIRGLDGR 70
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCY 127
+ G R VE + G R Y RG GR F+ +++CY
Sbjct: 71 TICGRRARVEPSNGRRLR---DRSYFRRGI----GRLFH---------------PEDRCY 108
Query: 128 RCGERGHIERNCQ 140
CGERGH RNCQ
Sbjct: 109 ECGERGHYARNCQ 121
>gi|384493187|gb|EIE83678.1| hypothetical protein RO3G_08383 [Rhizopus delemar RA 99-880]
Length = 163
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 48/69 (69%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
RLYVG + R +D+ ++FSRYGRIRD+ ++ +AFVEF D RDADDA L+G ++
Sbjct: 24 CRLYVGNVNRYVREKDIRDLFSRYGRIRDLILRNFYAFVEFDDVRDADDACKELDGYKLE 83
Query: 71 GSRIIVEFA 79
G RIIV A
Sbjct: 84 GDRIIVHVA 92
>gi|448878358|gb|AGE46142.1| arginine/serine-rich splicing factor SR30 transcript I [Sorghum
bicolor]
Length = 255
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSL 64
G +YVG L R R+++++F +YGRI ++D+K FAFVEF DP DA+DA Y
Sbjct: 6 GCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAEDAIYGR 65
Query: 65 NGRDVDGSRIIVEFARGGPRGP 86
+G + DG R+ VE A GG RGP
Sbjct: 66 DGYNFDGHRLRVELAHGG-RGP 86
>gi|13385016|ref|NP_079849.1| serine/arginine-rich splicing factor 9 [Mus musculus]
gi|66774167|sp|Q9D0B0.1|SRSF9_MOUSE RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|12847866|dbj|BAB27740.1| unnamed protein product [Mus musculus]
gi|15126569|gb|AAH12217.1| Splicing factor, arginine/serine rich 9 [Mus musculus]
gi|148687919|gb|EDL19866.1| splicing factor, arginine/serine rich 9, isoform CRA_b [Mus
musculus]
Length = 222
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 54/88 (61%), Gaps = 11/88 (12%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYS 63
G R+YVG L S R +DLE++F +YGRIR++++K FAFV F DPRDA+DA Y
Sbjct: 13 GDGRIYVGNLPSDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYG 72
Query: 64 LNGRDVDGSRIIVEFAR------GGPRG 85
NG D R+ VEF R G PRG
Sbjct: 73 RNGYDYGQCRLRVEFPRTYGGRGGWPRG 100
>gi|449274550|gb|EMC83651.1| Splicing factor, arginine/serine-rich 7, partial [Columba livia]
Length = 226
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 67/133 (50%), Gaps = 26/133 (19%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRDA+DA L+G+
Sbjct: 2 TKVYVGNLGTGAGKSELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 61
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCY 127
+ GSR+ VE + G PR R PP + D ++CY
Sbjct: 62 VICGSRVRVEVSTGMPRRSRYDR-------PPAR----------------RPFDPNDRCY 98
Query: 128 RCGERGHIERNCQ 140
CGE+GH +C
Sbjct: 99 ECGEKGHYAYDCH 111
>gi|444723179|gb|ELW63840.1| Serine/arginine-rich splicing factor 9 [Tupaia chinensis]
Length = 235
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD-----FAFVEFSDPRDADDARYS 63
G R+YVG L + R +DLE++F +YGRIR++++K FAFV F DPRDA+DA Y
Sbjct: 26 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNQHGLVPFAFVRFEDPRDAEDAIYG 85
Query: 64 LNGRDVDGSRIIVEFAR 80
NG D R+ VEF R
Sbjct: 86 RNGYDYGQCRLRVEFPR 102
>gi|395334012|gb|EJF66388.1| hypothetical protein DICSQDRAFT_123087 [Dichomitus squalens
LYAD-421 SS1]
Length = 503
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
++Y+G L TR DLE F + G I ++++K + FVEF A+++ + G
Sbjct: 117 KVYIGGLPEHTRKEDLESCFGKIGNIVNIELKVGYGFVEFDSREAAEESVAKYHEGYFMG 176
Query: 72 SRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
++I VE + GG G + +Y G G CF CG GHWAR+C
Sbjct: 177 NKIRVEISHGG----GRTAKYSGD-----PGACFKCGQMGHWAREC 213
>gi|355557751|gb|EHH14531.1| hypothetical protein EGK_00474, partial [Macaca mulatta]
Length = 477
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 40/55 (72%)
Query: 27 LEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 81
+E F YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 1 VERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 55
>gi|147900017|ref|NP_001086749.1| serine/arginine-rich splicing factor 7 [Xenopus laevis]
gi|50603927|gb|AAH77393.1| MGC81677 protein [Xenopus laevis]
Length = 234
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 70/143 (48%), Gaps = 26/143 (18%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDA 57
M RY G ++YVG L + +LE FS YG +R V + R+ FAFVEF D RDA
Sbjct: 1 MSRYGRYAGEAKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDTRDA 60
Query: 58 DDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+DA L+G+ + GSR+ VE + G PR R PP
Sbjct: 61 EDAVRGLDGKVICGSRVRVELSTGMPRRSRYDR-------PPAR---------------- 97
Query: 118 KAGDWKNKCYRCGERGHIERNCQ 140
+ D ++CY CGE+GH +CQ
Sbjct: 98 RPFDPSDRCYECGEKGHYAYDCQ 120
>gi|221221656|gb|ACM09489.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 272
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F+ YG +R V + R+ FAFVE+ DPRDA+DA ++G+
Sbjct: 15 CKVYVGDLGNGAAKGELERAFNYYGPLRSVWVARNPPGFAFVEYEDPRDAEDATKGMDGK 74
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+ G+RI VE + G R R P + RC+ CG +GH+A DC
Sbjct: 75 VLCGARIRVELSTGMSRKSRHDRPSRRHFDP--NDRCYQCGENGHYAYDC 122
>gi|47087341|ref|NP_998631.1| serine/arginine-rich splicing factor 6a [Danio rerio]
gi|32822789|gb|AAH55238.1| Splicing factor, arginine/serine-rich 6a [Danio rerio]
Length = 347
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+GRL+ R +D++ FS YG++ +VD+K + FVEF D RDADDA Y LNG+++ G
Sbjct: 3 RVYIGRLSYHVREKDIQRFFSGYGKLLEVDLKNGYGFVEFEDTRDADDAVYELNGKELCG 62
>gi|195152782|ref|XP_002017315.1| GL22249 [Drosophila persimilis]
gi|198454070|ref|XP_001359460.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
gi|194112372|gb|EDW34415.1| GL22249 [Drosophila persimilis]
gi|198132637|gb|EAL28606.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
Length = 263
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 6/83 (7%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
R+YVG L R++D++++F ++G++ VD+K FAFVEF D RDADDA + +G
Sbjct: 8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 67
Query: 68 DVDGSRIIVEFARGGPRGPGGSR 90
D DG R+ VEF RGG GPG R
Sbjct: 68 DYDGYRLRVEFPRGG--GPGSYR 88
>gi|357441751|ref|XP_003591153.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480201|gb|AES61404.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 290
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
LYVG L R R++E++F +YG I D+D+K +AFVEF D RDA DA Y +G
Sbjct: 40 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGY 99
Query: 68 DVDGSRIIVEFARGG 82
D DG R++VE A GG
Sbjct: 100 DFDGYRLLVELAHGG 114
>gi|340726341|ref|XP_003401518.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
terrestris]
gi|350423930|ref|XP_003493634.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
impatiens]
Length = 248
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 107/216 (49%), Gaps = 47/216 (21%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
R+YVG L R++D++++F ++G++ VD+K FAFVEF DPRDA+DA ++ +G
Sbjct: 10 RIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 69
Query: 68 DVDGSRIIVEFARG--------GPRGPG----GSREYL----GRGPPP--GSGRCFNCGI 109
D DG R+ VEF RG G RG G G R + GRGPP R G+
Sbjct: 70 DYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEMSNSRGRGPPARRSQYRVLVTGL 129
Query: 110 --DGHWARDCK-----AGDW-KNKCYRCGERGHIE----RNCQNSPKKL---RPRSYSRS 154
G W +D K AGD Y+ G G +E + + + KKL R RS+
Sbjct: 130 PPSGSW-QDLKDHMREAGDVCFADVYKDGT-GVVEFLRYEDMKYAVKKLDDSRFRSHEGE 187
Query: 155 PSPRRG--------RSRSRSYSRGRSDSRSRSPVKR 182
+ R R RS RGRS SRS SP +R
Sbjct: 188 VAYIRVKEDHNSGDRGRSEDRERGRSHSRSYSPRRR 223
>gi|332027470|gb|EGI67553.1| Splicing factor, arginine/serine-rich 1 [Acromyrmex echinatior]
Length = 248
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 53/75 (70%), Gaps = 4/75 (5%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
R+YVG L R++D++++F ++G++ VD+K FAFVEF DPRDA+DA ++ +G
Sbjct: 10 RIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 69
Query: 68 DVDGSRIIVEFARGG 82
D DG R+ VEF RGG
Sbjct: 70 DYDGYRLRVEFPRGG 84
>gi|383848005|ref|XP_003699643.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Megachile
rotundata]
Length = 248
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 107/216 (49%), Gaps = 47/216 (21%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
R+YVG L R++D++++F ++G++ VD+K FAFVEF DPRDA+DA ++ +G
Sbjct: 10 RIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 69
Query: 68 DVDGSRIIVEFARG--------GPRGPG----GSREYL----GRGPPP--GSGRCFNCGI 109
D DG R+ VEF RG G RG G G R + GRGPP R G+
Sbjct: 70 DYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEMSNSRGRGPPARRSQYRVLVTGL 129
Query: 110 --DGHWARDCK-----AGDW-KNKCYRCGERGHIE----RNCQNSPKKL---RPRSYSRS 154
G W +D K AGD Y+ G G +E + + + KKL R RS+
Sbjct: 130 PPSGSW-QDLKDHMREAGDVCFADVYKDGT-GVVEFLRYEDMKYAVKKLDDSRFRSHEGE 187
Query: 155 PSPRRG--------RSRSRSYSRGRSDSRSRSPVKR 182
+ R R RS RGRS SRS SP +R
Sbjct: 188 VAYIRVKEDHSSGDRGRSEDRERGRSHSRSYSPRRR 223
>gi|355718943|gb|AES06437.1| splicing factor, arginine/serine-rich 9 [Mustela putorius furo]
Length = 220
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 54/88 (61%), Gaps = 11/88 (12%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYS 63
G R+YVG L + R +DLE++F +YGRIR++++K FAFV F DPRDA+DA Y
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYG 71
Query: 64 LNGRDVDGSRIIVEFAR------GGPRG 85
NG D R+ VEF R G PRG
Sbjct: 72 RNGYDYGQCRLRVEFPRTYGSRGGWPRG 99
>gi|57105666|ref|XP_534706.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1
[Canis lupus familiaris]
Length = 221
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 54/88 (61%), Gaps = 11/88 (12%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYS 63
G R+YVG L + R +DLE++F +YGRIR++++K FAFV F DPRDA+DA Y
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYG 71
Query: 64 LNGRDVDGSRIIVEFAR------GGPRG 85
NG D R+ VEF R G PRG
Sbjct: 72 RNGYDYGQCRLRVEFPRTYGSRGGWPRG 99
>gi|195038647|ref|XP_001990768.1| GH18077 [Drosophila grimshawi]
gi|193894964|gb|EDV93830.1| GH18077 [Drosophila grimshawi]
Length = 252
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 6/83 (7%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
R+YVG L R++D++++F ++G++ VD+K FAFVEF D RDADDA + +G
Sbjct: 8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 67
Query: 68 DVDGSRIIVEFARGGPRGPGGSR 90
D DG R+ VEF RGG GPG R
Sbjct: 68 DYDGYRLRVEFPRGG--GPGSYR 88
>gi|388515137|gb|AFK45630.1| unknown [Medicago truncatula]
Length = 259
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
LYVG L R R++E++F +YG I D+D+K +AFVEF D RDA DA Y +G
Sbjct: 9 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
D DG R++VE A GG
Sbjct: 69 DFDGYRLLVELAHGG 83
>gi|395508189|ref|XP_003758396.1| PREDICTED: uncharacterized protein LOC100934570 [Sarcophilus
harrisii]
Length = 235
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 67/133 (50%), Gaps = 26/133 (19%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
T++YVG L + +LE FS YG +R V + R+ FAFVEF DPRDA+DA L+G+
Sbjct: 13 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGK 72
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCY 127
+ GSR+ VE + G PR R PP + D ++CY
Sbjct: 73 VICGSRVRVELSTGMPRRSRYDR-------PPAR----------------RPFDPNDRCY 109
Query: 128 RCGERGHIERNCQ 140
CGE+GH +C
Sbjct: 110 ECGEKGHYAYDCH 122
>gi|195110201|ref|XP_001999670.1| GI24651 [Drosophila mojavensis]
gi|193916264|gb|EDW15131.1| GI24651 [Drosophila mojavensis]
Length = 246
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 6/83 (7%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
R+YVG L R++D++++F ++G++ VD+K FAFVEF D RDADDA + +G
Sbjct: 8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 67
Query: 68 DVDGSRIIVEFARGGPRGPGGSR 90
D DG R+ VEF RGG GPG R
Sbjct: 68 DYDGYRLRVEFPRGG--GPGSYR 88
>gi|380024306|ref|XP_003695942.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1-like [Apis florea]
Length = 248
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 53/75 (70%), Gaps = 4/75 (5%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
R+YVG L R++D++++F ++G++ VD+K FAFVEF DPRDA+DA ++ +G
Sbjct: 10 RIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 69
Query: 68 DVDGSRIIVEFARGG 82
D DG R+ VEF RGG
Sbjct: 70 DYDGYRLRVEFPRGG 84
>gi|194744791|ref|XP_001954876.1| GF16525 [Drosophila ananassae]
gi|190627913|gb|EDV43437.1| GF16525 [Drosophila ananassae]
Length = 253
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 6/83 (7%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
R+YVG L R++D++++F ++G++ VD+K FAFVEF D RDADDA + +G
Sbjct: 8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 67
Query: 68 DVDGSRIIVEFARGGPRGPGGSR 90
D DG R+ VEF RGG GPG R
Sbjct: 68 DYDGYRLRVEFPRGG--GPGSYR 88
>gi|357441749|ref|XP_003591152.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480200|gb|AES61403.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 334
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
LYVG L R R++E++F +YG I D+D+K +AFVEF D RDA DA Y +G
Sbjct: 40 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGY 99
Query: 68 DVDGSRIIVEFARGG 82
D DG R++VE A GG
Sbjct: 100 DFDGYRLLVELAHGG 114
>gi|432889402|ref|XP_004075259.1| PREDICTED: uncharacterized protein LOC101155211 [Oryzias latipes]
Length = 251
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 63/110 (57%), Gaps = 6/110 (5%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE FS YG +R V + R+ FAFVEF DPRDA+DA ++G+
Sbjct: 16 CKVYVGDLGNGAAKGELERAFSYYGPLRSVWVARNPPGFAFVEFEDPRDAEDAVKGMDGK 75
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+ GSR+ VE + G R R L R + +C+ CG GH+A DC
Sbjct: 76 LLCGSRVRVEMSTGLSRK---GRGRLSRRQFDPNDKCYQCGDRGHYAYDC 122
>gi|33146854|dbj|BAC79849.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 362
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K FAFVEF DPRDA+DA +G
Sbjct: 75 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 134
Query: 68 DVDGSRIIVEFARGG 82
+ DG+R+ VE A GG
Sbjct: 135 NFDGNRLRVELAHGG 149
>gi|281340832|gb|EFB16416.1| hypothetical protein PANDA_020890 [Ailuropoda melanoleuca]
Length = 215
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 54/88 (61%), Gaps = 11/88 (12%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYS 63
G R+YVG L + R +DLE++F +YGRIR++++K FAFV F DPRDA+DA Y
Sbjct: 6 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYG 65
Query: 64 LNGRDVDGSRIIVEFAR------GGPRG 85
NG D R+ VEF R G PRG
Sbjct: 66 RNGYDYGQCRLRVEFPRTYGGRAGWPRG 93
>gi|57164147|ref|NP_001009255.1| serine/arginine-rich splicing factor 9 [Rattus norvegicus]
gi|92058728|sp|Q5PPI1.1|SRSF9_RAT RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|56388745|gb|AAH87684.1| Splicing factor, arginine/serine rich 9 [Rattus norvegicus]
gi|149063569|gb|EDM13892.1| splicing factor, arginine/serine rich 9, isoform CRA_b [Rattus
norvegicus]
Length = 221
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 53/85 (62%), Gaps = 9/85 (10%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYS 63
G R+YVG L + R +DLE++F +YGRIR++++K FAFV F DPRDA+DA Y
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYG 71
Query: 64 LNGRDVDGSRIIVEFARGGPRGPGG 88
NG D R+ VEF PR GG
Sbjct: 72 RNGYDYGQCRLRVEF----PRAYGG 92
>gi|217073712|gb|ACJ85216.1| unknown [Medicago truncatula]
Length = 246
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
LYVG L R R++E++F +YG I D+D+K +AFVEF D RDA DA Y +G
Sbjct: 9 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
D DG R++VE A GG
Sbjct: 69 DFDGYRLLVELAHGG 83
>gi|195388956|ref|XP_002053144.1| GJ23504 [Drosophila virilis]
gi|194151230|gb|EDW66664.1| GJ23504 [Drosophila virilis]
Length = 247
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 6/83 (7%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
R+YVG L R++D++++F ++G++ VD+K FAFVEF D RDADDA + +G
Sbjct: 8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 67
Query: 68 DVDGSRIIVEFARGGPRGPGGSR 90
D DG R+ VEF RGG GPG R
Sbjct: 68 DYDGYRLRVEFPRGG--GPGSYR 88
>gi|66548276|ref|XP_393525.2| PREDICTED: serine/arginine-rich splicing factor 1-like [Apis
mellifera]
Length = 248
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 53/75 (70%), Gaps = 4/75 (5%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
R+YVG L R++D++++F ++G++ VD+K FAFVEF DPRDA+DA ++ +G
Sbjct: 10 RIYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 69
Query: 68 DVDGSRIIVEFARGG 82
D DG R+ VEF RGG
Sbjct: 70 DYDGYRLRVEFPRGG 84
>gi|355754034|gb|EHH57999.1| hypothetical protein EGM_07756 [Macaca fascicularis]
Length = 248
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEF 78
D G R+ VEF
Sbjct: 77 YDYYGYRLRVEF 88
>gi|357441755|ref|XP_003591155.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480203|gb|AES61406.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 316
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
LYVG L R R++E++F +YG I D+D+K +AFVEF D RDA DA Y +G
Sbjct: 40 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGY 99
Query: 68 DVDGSRIIVEFARGG 82
D DG R++VE A GG
Sbjct: 100 DFDGYRLLVELAHGG 114
>gi|322789865|gb|EFZ15012.1| hypothetical protein SINV_14247 [Solenopsis invicta]
Length = 186
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 53/75 (70%), Gaps = 4/75 (5%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
R+YVG L R++D++++F ++G++ VD+K FAFVEF DPRDA+DA ++ +G
Sbjct: 11 RIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 70
Query: 68 DVDGSRIIVEFARGG 82
D DG R+ VEF RGG
Sbjct: 71 DYDGYRLRVEFPRGG 85
>gi|409079907|gb|EKM80268.1| hypothetical protein AGABI1DRAFT_113469 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 423
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
++Y+G L TR DL F + G I ++++K + FVEF A+++ N
Sbjct: 70 NKVYIGGLPEHTREADLHNCFGKIGGIANIELKVGYGFVEFDTREAAEESVAKYNEGHFM 129
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
G++I VE + GG G + ++ G G CF CG GHWAR+C
Sbjct: 130 GNKIKVEISHGG----GRTAKFAG-----DPGACFRCGQMGHWAREC 167
>gi|410976794|ref|XP_003994798.1| PREDICTED: serine/arginine-rich splicing factor 9 [Felis catus]
Length = 340
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 11/84 (13%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L + R +DLE++F +YGRIR++++K FAFV F DPRDA+DA Y NG
Sbjct: 135 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 194
Query: 68 DVDGSRIIVEFAR------GGPRG 85
D R+ VEF R G PRG
Sbjct: 195 DYGQCRLRVEFPRTYGSRGGWPRG 218
>gi|326490421|dbj|BAJ84874.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522680|dbj|BAJ88386.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 286
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI ++D+K FAFVEF DPRDA+DA +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
+ DG+R+ VE A GG
Sbjct: 69 NFDGNRLRVELAHGG 83
>gi|389751418|gb|EIM92491.1| hypothetical protein STEHIDRAFT_127304 [Stereum hirsutum FP-91666
SS1]
Length = 454
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
++Y+G L TR DL+ F + GRI ++++K + FVEF A+++ +
Sbjct: 84 NKVYIGGLPENTRQEDLQSCFGKIGRITNIELKVGYGFVEFESREAAEESVAKYHEGFFM 143
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
G++I VE +RGG G ++ G G CF CG GHWAR+C
Sbjct: 144 GNKIRVELSRGG----GRYAKFSGD-----PGACFKCGQMGHWAREC 181
>gi|403413643|emb|CCM00343.1| predicted protein [Fibroporia radiculosa]
Length = 559
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
++Y+G L TR DLE F + G I ++++K + FVEF A+++ +
Sbjct: 161 NKVYIGGLPEHTRKEDLESCFGKIGTIVNIELKVGYGFVEFESREAAEESVAKYHEGYFM 220
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
G++I VE + GG G + +Y G G CF CG GHWAR+C
Sbjct: 221 GNKIRVELSHGG----GRTAKYSGD-----PGACFKCGQVGHWAREC 258
>gi|297739973|emb|CBI30155.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 66/128 (51%), Gaps = 22/128 (17%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRD--VDMKRD------FAFVEFSDPRDADDARYS 63
R++VG L T R LE+ FSRYG+I + V M+RD F F+ F+D R +DA
Sbjct: 8 RIFVGGLGWNTSERHLEDAFSRYGKILESLVMMERDTGRPRGFGFITFADHRAMEDAIRE 67
Query: 64 LNGRDVDGSRIIVE------------FARGG-PRGPGGSREYLGRGPPPG-SGRCFNCGI 109
++GR++DG I V + GG R GG Y G P G S CF CG
Sbjct: 68 MHGRELDGRVISVNKAQPKMGSEDSGYGYGGRDRMLGGRDSYRGVDKPVGRSDDCFKCGR 127
Query: 110 DGHWARDC 117
GHWARDC
Sbjct: 128 PGHWARDC 135
>gi|391339441|ref|XP_003744058.1| PREDICTED: uncharacterized protein LOC100905097 [Metaseiulus
occidentalis]
Length = 355
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 53/94 (56%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
R++VG L + RD+E+ F R GRIRDV K ++AFVEF+D RDA DA LNG
Sbjct: 3 ARVFVGHLPRKVDRRDIEDYFDRIGRIRDVVHKGNYAFVEFADERDARDAISELNGTSWK 62
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRC 104
G RIIVE A R S + GR P GR
Sbjct: 63 GERIIVELANRRRRSRSQSGDRRGRNPRRKPGRI 96
>gi|426198327|gb|EKV48253.1| hypothetical protein AGABI2DRAFT_191883 [Agaricus bisporus var.
bisporus H97]
Length = 426
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
++Y+G L TR DL F + G I ++++K + FVEF A+++ N
Sbjct: 73 NKVYIGGLPEHTREADLHNCFGKIGGIANIELKVGYGFVEFDTREAAEESVAKYNEGHFM 132
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
G++I VE + GG G + ++ G G CF CG GHWAR+C
Sbjct: 133 GNKIKVEISHGG----GRTAKFAG-----DPGACFRCGQMGHWAREC 170
>gi|47224788|emb|CAG06358.1| unnamed protein product [Tetraodon nigroviridis]
Length = 226
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 16/115 (13%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE FS YG +R V + R+ FAFVEF DPRDA+DA ++G+
Sbjct: 14 CKVYVGDLGNGAAKGELERAFSYYGPLRTVWVARNPPGFAFVEFEDPRDAEDAVKGMDGK 73
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPP-----GSGRCFNCGIDGHWARDC 117
+ GSR+ VE + G R GRG P + RC+ CG GH+A DC
Sbjct: 74 LLCGSRVRVEMSTGLSRK--------GRGRPSRRQFDPNDRCYQCGDRGHYAYDC 120
>gi|307203784|gb|EFN82720.1| Splicing factor, arginine/serine-rich 1 [Harpegnathos saltator]
Length = 193
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 53/76 (69%), Gaps = 4/76 (5%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D++++F ++G++ VD+K FAFVEF DPRDA+DA ++ +G
Sbjct: 9 CRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDG 68
Query: 67 RDVDGSRIIVEFARGG 82
D DG R+ VEF RGG
Sbjct: 69 YDYDGYRLRVEFPRGG 84
>gi|409051294|gb|EKM60770.1| hypothetical protein PHACADRAFT_246886 [Phanerochaete carnosa
HHB-10118-sp]
Length = 447
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
++Y+G L TR DLE F + G+I +++K + FVEF A+++ + G
Sbjct: 68 KVYIGGLPEHTRKEDLESCFGKIGKIVAIELKVGYGFVEFDSREAAEESVAKYHEGFFMG 127
Query: 72 SRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
++I VE + GG R S + G CF CG GHWAR+C
Sbjct: 128 NKIRVELSHGGGRTAKYSND---------PGACFKCGQVGHWAREC 164
>gi|353238715|emb|CCA70653.1| hypothetical protein PIIN_04589 [Piriformospora indica DSM 11827]
Length = 410
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
++YVG L TR DL++ F +G I+ +++K + FV F + A++A + NG
Sbjct: 47 ANKVYVGNLPDDTREADLQDCFKEFGVIKSIELKTGYGFVAFDSRQAAEEAAKTYNGGSF 106
Query: 70 DGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
G+ I V A G + GS+ + G CF CG GHWAR+C
Sbjct: 107 LGNTIRVAPAHGTNK--TGSKSLV------EPGACFKCGNHGHWAREC 146
>gi|357441753|ref|XP_003591154.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480202|gb|AES61405.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 322
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
LYVG L R R++E++F +YG I D+D+K +AFVEF D RDA DA Y +G
Sbjct: 40 LYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGY 99
Query: 68 DVDGSRIIVEFARGG 82
D DG R++VE A GG
Sbjct: 100 DFDGYRLLVELAHGG 114
>gi|410910550|ref|XP_003968753.1| PREDICTED: uncharacterized protein LOC101078845 [Takifugu rubripes]
Length = 222
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 16/115 (13%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE FS YG +R V + R+ FAFVEF DPRDA+DA ++G+
Sbjct: 14 CKVYVGDLGNGAAKGELERAFSYYGPLRTVWVARNPPGFAFVEFEDPRDAEDAVKGMDGK 73
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPP-----GSGRCFNCGIDGHWARDC 117
+ GSR+ VE + G R GRG P + RC+ CG GH+A DC
Sbjct: 74 LLCGSRVRVEMSTGLSRK--------GRGRPSRRQFDPNDRCYQCGDRGHYAYDC 120
>gi|115474019|ref|NP_001060608.1| Os07g0673500 [Oryza sativa Japonica Group]
gi|113612144|dbj|BAF22522.1| Os07g0673500 [Oryza sativa Japonica Group]
Length = 296
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K FAFVEF DPRDA+DA +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
+ DG+R+ VE A GG
Sbjct: 69 NFDGNRLRVELAHGG 83
>gi|443899862|dbj|GAC77190.1| alternative splicing factor SRp55/B52/SRp75 [Pseudozyma antarctica
T-34]
Length = 260
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
TR+YVG+L R D++++F YGR++DV + F FVEF PRDA+DA +GR+
Sbjct: 3 TRVYVGKLPPDVRRGDIDDLFRDYGRLQDVRIMGSFGFVEFEHPRDAEDAVKDFDGRNFM 62
Query: 71 GSRIIVEFARGGPR----GPGGSREYLGRGPPPG 100
G RI+V+ A+ G R G+ Y RG PPG
Sbjct: 63 GERIVVQHAKSGERRREPAGYGADPYDRRGGPPG 96
>gi|355568562|gb|EHH24843.1| hypothetical protein EGK_08569 [Macaca mulatta]
Length = 292
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G
Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDG 76
Query: 67 RDVDGSRIIVEF 78
D G R+ VEF
Sbjct: 77 YDYYGYRLRVEF 88
>gi|302828648|ref|XP_002945891.1| hypothetical protein VOLCADRAFT_72532 [Volvox carteri f.
nagariensis]
gi|300268706|gb|EFJ52886.1| hypothetical protein VOLCADRAFT_72532 [Volvox carteri f.
nagariensis]
Length = 288
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPR 55
M R+D RYGG ++VG L R ++L+EIF ++GRIR +D+K+ FAF+EF DPR
Sbjct: 1 MARWD-RYGGRAIFVGNLPIDVREKELDEIFYKFGRIRMIDIKKPARPPGFAFIEFDDPR 59
Query: 56 DADDARYSLNGRDVDGSRIIVEFARGG 82
A++A N + G R+ VE ARGG
Sbjct: 60 SAEEAARRRNNYEFAGMRMRVEIARGG 86
>gi|221220242|gb|ACM08782.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 260
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F+ YG +R V + R+ FAFVE+ DPRDA+DA ++G+
Sbjct: 15 CKVYVGDLGNGAAKGELERAFNYYGPLRSVWVARNPPGFAFVEYEDPRDAEDATKGMDGK 74
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+ G+RI VE + G R R P + RC+ CG +GH+A DC
Sbjct: 75 VLCGARIRVELSTGMSRKSRHDRPSRRHFDP--NDRCYQCGENGHYAYDC 122
>gi|241849002|ref|XP_002415663.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215509877|gb|EEC19330.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 223
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
R+YVG L R++D+E++F ++G+I +D+K FAFVEF DPRDA+DA ++ +G
Sbjct: 9 RIYVGNLPPDIRTKDIEDLFYKFGKITFIDLKNRRGPPFAFVEFEDPRDAEDAAHARDGY 68
Query: 68 DVDGSRIIVEFARG 81
D DG R+ VEF RG
Sbjct: 69 DYDGYRLRVEFPRG 82
>gi|157113456|ref|XP_001657837.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108877724|gb|EAT41949.1| AAEL006473-PA [Aedes aegypti]
Length = 237
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD----FAFVEFSDPRDADDARYSLNGR 67
R+YVG L R++D++++F ++G++ VD+K FAFVEF D RDADDA + +G
Sbjct: 9 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 68
Query: 68 DVDGSRIIVEFARGGPRGPG 87
D DG R+ VEF RGG GPG
Sbjct: 69 DYDGYRLRVEFPRGG--GPG 86
>gi|403166701|ref|XP_003326577.2| hypothetical protein PGTG_07555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375166678|gb|EFP82158.2| hypothetical protein PGTG_07555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 258
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 74/138 (53%), Gaps = 19/138 (13%)
Query: 9 GGTRLYVGRL---ASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLN 65
G R+YVGR+ ASRT D+E+ F RYG + DV + F F+E+ RDA+DA + LN
Sbjct: 4 AGRRIYVGRIPPDASRT---DVEKYFGRYGTLMDVRIMAGFGFLEYDSVRDAEDAVHDLN 60
Query: 66 GRDVDGSRIIVEFARGGPRGPGGSREYL--GRGPPPGSGRCFNCGIDGHWARDCKAGDWK 123
GRD G R+IVEFA+ PRG R+ G GP G R G+ + + D K
Sbjct: 61 GRDFMGERLIVEFAK-APRG----RDIHSGGHGPRRGGFRLLVKGL----SHETSWQDLK 111
Query: 124 NKCYRCG--ERGHIERNC 139
+ + G R ++RN
Sbjct: 112 DFARQAGNVTRADVDRNM 129
>gi|322792693|gb|EFZ16561.1| hypothetical protein SINV_05882 [Solenopsis invicta]
Length = 386
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 43/62 (69%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
GTR+YVG L TR RDLE F YGR RDV +K + FVEF D RDADDA Y LNG+++
Sbjct: 56 GTRVYVGGLPYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYRDADDAVYELNGKEL 115
Query: 70 DG 71
G
Sbjct: 116 LG 117
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFV 49
TR++VG L R R RDLE+ F +YGRI++V MK FAFV
Sbjct: 3 TRVFVGGLTYRVRERDLEKFFRKYGRIKEVAMKNGFAFV 41
>gi|170045710|ref|XP_001850441.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
gi|167868651|gb|EDS32034.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
Length = 241
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 6/83 (7%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD----FAFVEFSDPRDADDARYSLNGR 67
R+YVG L R++D++++F ++G++ VD+K FAFVEF D RDADDA + +G
Sbjct: 9 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDNRDADDAVKARDGY 68
Query: 68 DVDGSRIIVEFARGGPRGPGGSR 90
D DG R+ VEF RGG GPG R
Sbjct: 69 DYDGYRLRVEFPRGG--GPGSYR 89
>gi|222637670|gb|EEE67802.1| hypothetical protein OsJ_25544 [Oryza sativa Japonica Group]
Length = 338
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K FAFVEF DPRDA+DA +G
Sbjct: 75 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 134
Query: 68 DVDGSRIIVEFARGG 82
+ DG+R+ VE A GG
Sbjct: 135 NFDGNRLRVELAHGG 149
>gi|221219336|gb|ACM08329.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 266
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F+ YG +R V + R+ FAFVE+ DPRDA+DA ++G+
Sbjct: 15 CKVYVGDLGNGAAKGELERAFNYYGPLRSVWVARNPPGFAFVEYEDPRDAEDATKGMDGK 74
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+ G+RI VE + G R R P + RC+ CG +GH+A DC
Sbjct: 75 VLCGARIRVELSTGMSRKSRHDRPSRRHFDP--NDRCYQCGENGHYAYDC 122
>gi|2435501|gb|AAC39543.1| HRS [Homo sapiens]
Length = 189
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FV DPRDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFV---DPRDADDAVYELDGKEL 59
Query: 70 DGSRIIVE 77
R+ +E
Sbjct: 60 CSERVTIE 67
>gi|432106513|gb|ELK32262.1| Serine/arginine-rich splicing factor 7 [Myotis davidii]
Length = 226
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 67/133 (50%), Gaps = 26/133 (19%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
T++YVG LA+ +LE FS YG + V + R+ FAFV F DPRDA+DA L+G+
Sbjct: 17 TKVYVGNLATGAGKGELERAFSYYGPLTTVWIARNPPGFAFVGFEDPRDAEDAVRGLDGK 76
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCY 127
+ SR+ VE + G PR R YL R P AR D ++CY
Sbjct: 77 VICDSRVRVELSTGMPR-----RSYLDRPP----------------AR--HPFDPNDRCY 113
Query: 128 RCGERGHIERNCQ 140
CGE+GH C
Sbjct: 114 ECGEKGHYAYYCH 126
>gi|328767259|gb|EGF77309.1| hypothetical protein BATDEDRAFT_32353 [Batrachochytrium
dendrobatidis JAM81]
Length = 179
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 63/111 (56%), Gaps = 17/111 (15%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGRD 68
L++GR+ RS DLE+IF +YG+I D+K F FVE+ D RDA++A + +
Sbjct: 2 LFIGRVPEDARSSDLEDIFRKYGKIIRCDVKHGASVSFGFVEYEDKRDAEEAVKAGQETE 61
Query: 69 VD--GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+ G+++ VE+A+ G R GG R S CF CG GHWAR+C
Sbjct: 62 FEFNGAKMYVEWAKAGGR-RGGER----------SDGCFKCGETGHWAREC 101
>gi|387219571|gb|AFJ69494.1| splicing factor, arginine/serine-rich 1/9 [Nannochloropsis
gaditana CCMP526]
Length = 277
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 10/89 (11%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R RDL+++F +YGRIR +D+KR +AFV F DPRDA DA + +
Sbjct: 4 RIYVGNLPMDVRERDLDDLFYKYGRIRGIDIKRPSRPPAYAFVAFEDPRDAKDAVHYRDN 63
Query: 67 RDVDGSRIIVEFARGGP-----RGPGGSR 90
D DG RI VE A P RG GG R
Sbjct: 64 YDFDGGRIRVELANETPRRRDDRGFGGGR 92
>gi|395833916|ref|XP_003789963.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1
[Otolemur garnettii]
gi|395833918|ref|XP_003789964.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2
[Otolemur garnettii]
Length = 221
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYS 63
G R+YVG L + R +DLE++F +YGRIR++++K FAFV F DPRDA+DA Y
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYG 71
Query: 64 LNGRDVDGSRIIVEFAR 80
NG D R+ VEF R
Sbjct: 72 RNGYDYGQCRLRVEFPR 88
>gi|218200241|gb|EEC82668.1| hypothetical protein OsI_27298 [Oryza sativa Indica Group]
Length = 321
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K FAFVEF DPRDA+DA +G
Sbjct: 75 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 134
Query: 68 DVDGSRIIVEFARGG 82
+ DG+R+ VE A GG
Sbjct: 135 NFDGNRLRVELAHGG 149
>gi|29841408|gb|AAP06440.1| similar to NM_006276 splicing factor, arginine/serine-rich 7
[Schistosoma japonicum]
gi|226472076|emb|CAX77076.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472078|emb|CAX77077.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472080|emb|CAX77078.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472082|emb|CAX77079.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472084|emb|CAX77080.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
Length = 169
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 63/128 (49%), Gaps = 24/128 (18%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNG 66
GT++Y+G L R+LE IF YGR+R+V + R+ FAFVEF D DA DA L+G
Sbjct: 9 GTKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELDG 68
Query: 67 RDVDGSRIIVEFARGGPR-----------------GPGGSREYLGRGPPPGSGRCFNCGI 109
+ G R VE + G R GPG R P + RC+ CG
Sbjct: 69 TVMCGVRARVELSTGKSRQKPWVRGGARNGGGRDNGPGSRR----MKPFDPADRCYECGE 124
Query: 110 DGHWARDC 117
GH+A DC
Sbjct: 125 RGHYAYDC 132
>gi|52140012|gb|AAU29333.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
gi|194698470|gb|ACF83319.1| unknown [Zea mays]
gi|413944987|gb|AFW77636.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 276
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSL 64
G +YVG L R R+++++F +YGRI ++D+K FAFVEF D RDA+DA Y
Sbjct: 6 GCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAEDAIYGR 65
Query: 65 NGRDVDGSRIIVEFARGG 82
+G + DG R+ VE A GG
Sbjct: 66 DGYNFDGHRLRVELAHGG 83
>gi|344237407|gb|EGV93510.1| Splicing factor, arginine/serine-rich 7 [Cricetulus griseus]
Length = 227
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 68/132 (51%), Gaps = 26/132 (19%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGRD 68
++YVG L + +LE FS YG +R V + R+ FAFVEF DPRDA+DA L+G+
Sbjct: 1 KVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKV 60
Query: 69 VDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYR 128
+ GSR+ VE + G PR R R P AR + D ++CY
Sbjct: 61 ICGSRVRVELSTGMPR-----RSRFDRPP----------------AR--RPFDPNDRCYE 97
Query: 129 CGERGHIERNCQ 140
CGE+GH +C
Sbjct: 98 CGEKGHYAYDCH 109
>gi|240848767|ref|NP_001155687.1| serine/arginine-rich splicing factor 1-like [Acyrthosiphon pisum]
gi|239789607|dbj|BAH71418.1| ACYPI006929 [Acyrthosiphon pisum]
Length = 244
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 54/78 (69%), Gaps = 5/78 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD----FAFVEFSDPRDADDARYSLNGR 67
R+YVG L R++D++++F ++G++ VD+K FAFVEF DPRDA+DA ++ +G
Sbjct: 7 RIYVGNLPPDIRTKDIQDLFYKFGKVLFVDLKNQRGPPFAFVEFDDPRDAEDAVHARDGY 66
Query: 68 DVDGSRIIVEFARG-GPR 84
D DG R+ VEF RG GP
Sbjct: 67 DYDGYRLRVEFPRGNGPH 84
>gi|307078155|ref|NP_001182495.1| splicing factor, arginine/serine-rich 9 [Sus scrofa]
Length = 221
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYS 63
G R+YVG L + R +DLE++F +YGRIR++++K FAFV F DPRDA+DA Y
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYG 71
Query: 64 LNGRDVDGSRIIVEFAR 80
NG D R+ VEF R
Sbjct: 72 RNGYDYGQCRLRVEFPR 88
>gi|242208424|ref|XP_002470063.1| predicted protein [Postia placenta Mad-698-R]
gi|220730963|gb|EED84813.1| predicted protein [Postia placenta Mad-698-R]
Length = 636
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
++Y+G L TR DLE F + G I ++++K + FVEF A+++ + G
Sbjct: 233 KVYIGGLPEHTRREDLESCFGKIGSIVNIELKVGYGFVEFETREAAEESVAKYHEGYFMG 292
Query: 72 SRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
++I VE + GG G + +Y G G CF CG GHWAR+C
Sbjct: 293 NKIRVELSHGG----GRTAKYSG-----DPGACFKCGQLGHWAREC 329
>gi|336374485|gb|EGO02822.1| hypothetical protein SERLA73DRAFT_70307 [Serpula lacrymans var.
lacrymans S7.3]
Length = 520
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
++YVG L TR DL F + G I +V++K + FVEF A+++ N
Sbjct: 143 NKVYVGGLPEHTRQEDLRSCFGKIGSIVNVELKVGYGFVEFDTKDAAEESVAKYNEGHFM 202
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
G++I VE + GG R S + G CF CG GHWAR+C
Sbjct: 203 GNKIRVEISHGGGRTSKHSGD---------PGACFKCGQTGHWAREC 240
>gi|158254720|dbj|BAF83333.1| unnamed protein product [Homo sapiens]
Length = 221
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYS 63
G R+YVG L + R +DLE++F +YGRIR++++K FAFV F DPRDA+DA Y
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYG 71
Query: 64 LNGRDVDGSRIIVEFAR 80
NG D R+ VEF R
Sbjct: 72 RNGYDYGQCRLRVEFPR 88
>gi|432877561|ref|XP_004073160.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Oryzias latipes]
Length = 380
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 64/128 (50%), Gaps = 30/128 (23%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE+ FS+YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETTEKALEQYFSKYGRIVEVILMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 64 LNGRDVDGSRIIVEFA--------------------RGGPRGPGGSR--EYLGRGPPPGS 101
+NG+ +DG I VE A RG PRGP GSR RGPP GS
Sbjct: 69 MNGKSLDGKPIKVEQATKPQFESAGRRGPPSNYSRSRGPPRGPRGSRGGPSGMRGPPRGS 128
Query: 102 GRCFNCGI 109
G F G+
Sbjct: 129 GDPFFKGM 136
>gi|449435631|ref|XP_004135598.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 315
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 9/104 (8%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YG I D+D+K +AFVEF D RDA+DA Y +G
Sbjct: 9 IYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAEDAIYGRDGY 68
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDG 111
DG R+ VEFA GG RG S + R GS R F + G
Sbjct: 69 KFDGCRLRVEFAHGG-RGHSSSVDRYSRS---GSSRDFAVLVTG 108
>gi|357609122|gb|EHJ66310.1| arginine/serine-rich splicing factor 7 [Danaus plexippus]
Length = 174
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 68/115 (59%), Gaps = 4/115 (3%)
Query: 7 RYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYS 63
RYG ++YVG L + +LE+ FS YG +R+V + R+ FAFVEF DPRDA+DA
Sbjct: 3 RYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAIRG 62
Query: 64 LNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPG-SGRCFNCGIDGHWARDC 117
L+GR + G R VE + GG G R PP RC++CG GH+ARDC
Sbjct: 63 LDGRTICGRRARVEMSNGGRGYGGRGPPPRSRLPPRPYDDRCYDCGDRGHYARDC 117
>gi|410915734|ref|XP_003971342.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Takifugu
rubripes]
Length = 238
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L RS+D+E++F ++G IRD+D+K FAFVEF DPRD+ DA Y +G
Sbjct: 16 RIYVGNLPPDIRSKDIEDLFYKFGAIRDIDLKNRRGGPPFAFVEFEDPRDSGDAVYERDG 75
Query: 67 RDVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 76 YDYDGYRLRVEF 87
>gi|225709420|gb|ACO10556.1| Serine-arginine protein 55 [Caligus rogercresseyi]
Length = 244
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G+R+Y+G L R RD+E+ +GRIR+V +K + FVEF DPRDADD ++G+D
Sbjct: 4 GSRVYIGNLPENVRERDVEKFLKDHGRIREVVIKSGYGFVEFDDPRDADDVVNDMDGKDF 63
Query: 70 DGSRIIVEFA 79
G RI VE A
Sbjct: 64 QGGRIRVEMA 73
>gi|348585449|ref|XP_003478484.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Cavia
porcellus]
gi|351702214|gb|EHB05133.1| Splicing factor, arginine/serine-rich 9 [Heterocephalus glaber]
Length = 221
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYS 63
G R+YVG L + R +DLE++F +YGRIR++++K FAFV F DPRDA+DA Y
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYG 71
Query: 64 LNGRDVDGSRIIVEFAR 80
NG D R+ VEF R
Sbjct: 72 RNGYDYGQCRLRVEFPR 88
>gi|417397369|gb|JAA45718.1| Putative splicing factor arginine/serine-rich 9-like protein
[Desmodus rotundus]
gi|431914272|gb|ELK15530.1| Splicing factor, arginine/serine-rich 9 [Pteropus alecto]
Length = 221
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYS 63
G R+YVG L + R +DLE++F +YGRIR++++K FAFV F DPRDA+DA Y
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYG 71
Query: 64 LNGRDVDGSRIIVEFAR 80
NG D R+ VEF R
Sbjct: 72 RNGYDYGQCRLRVEFPR 88
>gi|289739445|gb|ADD18470.1| alternative splicing factor ASF/SF2 [Glossina morsitans
morsitans]
Length = 236
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 4/78 (5%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD----FAFVEFSDPRDADDARYSLNG 66
+R+YVG L R++D++++F ++G++ VD+K FAFVEF D RDADDA + +G
Sbjct: 7 SRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDG 66
Query: 67 RDVDGSRIIVEFARGGPR 84
D DG R+ VEF RGG R
Sbjct: 67 YDYDGYRLRVEFPRGGGR 84
>gi|149063568|gb|EDM13891.1| splicing factor, arginine/serine rich 9, isoform CRA_a [Rattus
norvegicus]
Length = 124
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 53/85 (62%), Gaps = 9/85 (10%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYS 63
G R+YVG L + R +DLE++F +YGRIR++++K FAFV F DPRDA+DA Y
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYG 71
Query: 64 LNGRDVDGSRIIVEFARGGPRGPGG 88
NG D R+ VEF PR GG
Sbjct: 72 RNGYDYGQCRLRVEF----PRAYGG 92
>gi|4506903|ref|NP_003760.1| serine/arginine-rich splicing factor 9 [Homo sapiens]
gi|114647286|ref|XP_001160785.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2 [Pan
troglodytes]
gi|297693182|ref|XP_002823915.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pongo abelii]
gi|332262536|ref|XP_003280317.1| PREDICTED: serine/arginine-rich splicing factor 9 [Nomascus
leucogenys]
gi|402887863|ref|XP_003907300.1| PREDICTED: serine/arginine-rich splicing factor 9 [Papio anubis]
gi|410047369|ref|XP_003952371.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pan
troglodytes]
gi|3929377|sp|Q13242.1|SRSF9_HUMAN RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Pre-mRNA-splicing factor SRp30C; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|1049078|gb|AAA93069.1| SRp30c [Homo sapiens]
gi|4099429|gb|AAD00626.1| splicing factor SRp30c [Homo sapiens]
gi|62739648|gb|AAH93973.1| Splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|62740064|gb|AAH93971.1| Splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|119618600|gb|EAW98194.1| splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|261861074|dbj|BAI47059.1| splicing factor, arginine/serine-rich 9 [synthetic construct]
gi|380817540|gb|AFE80644.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
gi|383422449|gb|AFH34438.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
gi|410227624|gb|JAA11031.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410227626|gb|JAA11032.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410227628|gb|JAA11033.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263740|gb|JAA19836.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263742|gb|JAA19837.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263744|gb|JAA19838.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305344|gb|JAA31272.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305346|gb|JAA31273.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305348|gb|JAA31274.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410340983|gb|JAA39438.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410340985|gb|JAA39439.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
Length = 221
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYS 63
G R+YVG L + R +DLE++F +YGRIR++++K FAFV F DPRDA+DA Y
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYG 71
Query: 64 LNGRDVDGSRIIVEFAR 80
NG D R+ VEF R
Sbjct: 72 RNGYDYGQCRLRVEFPR 88
>gi|312074319|ref|XP_003139917.1| arginine/serine-rich splicing factor 1B [Loa loa]
gi|307764919|gb|EFO24153.1| arginine/serine-rich splicing factor 1B [Loa loa]
Length = 266
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMK--RD--FAFVEFSDPRDADDARYSLNGR 67
R++VG L S + RDLE+IF +YGRI +D+K RD FAFVEF DPRDA DA + +G
Sbjct: 8 RVFVGNLPSDVKQRDLEDIFYKYGRINFIDIKFTRDVPFAFVEFDDPRDARDAVHGRDGY 67
Query: 68 DVDGSRIIVEFA 79
D DG RI VE
Sbjct: 68 DFDGCRIRVELT 79
>gi|384950066|gb|AFI38638.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 221
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYS 63
G R+YVG L + R +DLE++F +YGRIR++++K FAFV F DPRDA+DA Y
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKTRHGLVPFAFVRFEDPRDAEDAIYG 71
Query: 64 LNGRDVDGSRIIVEFAR 80
NG D R+ VEF R
Sbjct: 72 RNGYDYGQCRLRVEFPR 88
>gi|55792397|gb|AAV65309.1| splicing factor SF2-like protein [Hordeum vulgare subsp. vulgare]
Length = 245
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI ++D+K FAFVEF DPRDA+DA +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
+ DG+R+ VE A GG
Sbjct: 69 NFDGNRLRVELAHGG 83
>gi|215741122|dbj|BAG97617.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 247
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K FAFVEF DPRDA+DA +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
+ DG+R+ VE A GG
Sbjct: 69 NFDGNRLRVELAHGG 83
>gi|405975539|gb|EKC40098.1| Splicing factor, arginine/serine-rich 4 [Crassostrea gigas]
Length = 214
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 4/76 (5%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMK----RDFAFVEFSDPRDADDARYSLNGRD 68
L+VGRL+ TR RDLE+IF YGR+ ++K +AF+++ D RDA+DA NGR+
Sbjct: 10 LFVGRLSKSTRVRDLEDIFEPYGRMTRCEIKYGAEMAYAFIDYEDHRDAEDAVRYENGRE 69
Query: 69 VDGSRIIVEFARGGPR 84
+ GS IIVE A+G PR
Sbjct: 70 ICGSSIIVERAKGAPR 85
>gi|383422447|gb|AFH34437.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 216
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYS 63
G R+YVG L + R +DLE++F +YGRIR++++K FAFV F DPRDA+DA Y
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYG 71
Query: 64 LNGRDVDGSRIIVEFAR 80
NG D R+ VEF R
Sbjct: 72 RNGYDYGQCRLRVEFPR 88
>gi|52140015|gb|AAU29336.1| ASF/SF2-like pre-mRNA splicing factor SRP31''' [Zea mays]
gi|413944988|gb|AFW77637.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 264
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSL 64
G +YVG L R R+++++F +YGRI ++D+K FAFVEF D RDA+DA Y
Sbjct: 6 GCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAEDAIYGR 65
Query: 65 NGRDVDGSRIIVEFARGG 82
+G + DG R+ VE A GG
Sbjct: 66 DGYNFDGHRLRVELAHGG 83
>gi|260826882|ref|XP_002608394.1| hypothetical protein BRAFLDRAFT_230000 [Branchiostoma floridae]
gi|229293745|gb|EEN64404.1| hypothetical protein BRAFLDRAFT_230000 [Branchiostoma floridae]
Length = 132
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L +R R+L +IFS YG +R+V + R+ FAFVEF DPRDA DA L+ R
Sbjct: 16 CKVYVGDLGTRGNERELRDIFSYYGPLRNVWVARNPPGFAFVEFEDPRDAKDAVKHLDRR 75
Query: 68 DVDGSRIIVEFARGGP-RGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
++ G+ VE + GG R G R P RC+ CG GH+ARDC
Sbjct: 76 EICGAPARVEMSTGGGRRSRYGPPPPYYRRPFDPLDRCYECGERGHYARDC 126
>gi|384950064|gb|AFI38637.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 216
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYS 63
G R+YVG L + R +DLE++F +YGRIR++++K FAFV F DPRDA+DA Y
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKTRHGLVPFAFVRFEDPRDAEDAIYG 71
Query: 64 LNGRDVDGSRIIVEFAR 80
NG D R+ VEF R
Sbjct: 72 RNGYDYGQCRLRVEFPR 88
>gi|321460885|gb|EFX71923.1| hypothetical protein DAPPUDRAFT_59706 [Daphnia pulex]
Length = 255
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F ++G+I +D+K FAFVEF DPRDA+DA ++ +G
Sbjct: 9 ARIYVGNLPPDIRTKDIEDLFYKFGKIAYIDLKNRRGPPFAFVEFEDPRDAEDAVHARDG 68
Query: 67 RDVDGSRIIVEFAR 80
D DG R+ VEF R
Sbjct: 69 YDYDGYRLRVEFPR 82
>gi|313227858|emb|CBY23007.1| unnamed protein product [Oikopleura dioica]
Length = 336
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
++++G L R RD+E+ F ++GRI+++ +K F FVEF D RDA+DA + +NG + G
Sbjct: 3 KVFIGNLTDRAEGRDVEDAFRKFGRIKEISLKNGFGFVEFDDVRDAEDAIHEMNGERLCG 62
Query: 72 SRIIVEFAR 80
RI VE A+
Sbjct: 63 DRITVELAK 71
>gi|256089259|ref|XP_002580730.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|350646106|emb|CCD59208.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 171
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 81/160 (50%), Gaps = 11/160 (6%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNG 66
GT++Y+G L R+LE IF YGR+R+V + R+ FAFVEF D DA DA L+G
Sbjct: 9 GTKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELDG 68
Query: 67 RDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKC 126
+ G R VE + G R + ++ G +G + GI +R K D ++C
Sbjct: 69 TVMCGVRARVELSTGKSR----QKPWVRGGGGARNGGGRDNGIG---SRRMKPFDPTDRC 121
Query: 127 YRCGERGHIERNCQNSPKKLRPRSYSRSPSPRRGRSRSRS 166
Y CGERGH +C+ + P RR RSRS S
Sbjct: 122 YECGERGHYAYDCRRRGGGPGGPNGRSRPEGRR-RSRSVS 160
>gi|357112280|ref|XP_003557937.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 289
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 54/81 (66%), Gaps = 6/81 (7%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K +AFVEF DPRDA+DA +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAEDACAGRDGY 68
Query: 68 DVDGSRIIVEFARGGPRGPGG 88
+ DG+R+ VE A GG RG GG
Sbjct: 69 NFDGNRLRVEPAHGG-RGSGG 88
>gi|156380790|ref|XP_001631950.1| predicted protein [Nematostella vectensis]
gi|156218999|gb|EDO39887.1| predicted protein [Nematostella vectensis]
Length = 135
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 46/67 (68%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
R+Y+GRL T D+ F YGR+RD+++K ++ FVEF D RDADDA Y NG+++
Sbjct: 3 CRVYLGRLPYGTTEDDVRRFFRSYGRLRDINLKNNYGFVEFEDDRDADDAVYECNGKEML 62
Query: 71 GSRIIVE 77
G RI+VE
Sbjct: 63 GERILVE 69
>gi|328786023|ref|XP_623841.3| PREDICTED: RNA-binding protein lark-like isoform 1 [Apis mellifera]
Length = 356
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
T+++VG L T++ + E+F++YG + + D+ R++ FV D +DA LNGR VD
Sbjct: 89 TKIFVGNLTDNTKAPQVRELFAKYGTVVECDIVRNYGFVHLEATGDVNDAIKELNGRMVD 148
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
G + V+ + R+ G G P +C+ CG GHW+++C G
Sbjct: 149 GQAMKVQIS------TSRVRQRPGMGDPE---QCYRCGRGGHWSKECPKG 189
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MP + G ++++G LA +T + D++ +F +YG++ + D+ +++ FV + +A
Sbjct: 1 MPGFSS-VGTFKIFIGNLADKTTNADIKPLFEKYGKVVECDVVKNYGFVHMENEEAGRNA 59
Query: 61 RYSLNGRDVDGSRIIVEFA--RGGPRGP 86
+LNG V G I E A R GP P
Sbjct: 60 IQNLNGHIVHGQEIKCEAAKSRKGPNTP 87
>gi|301790878|ref|XP_002930446.1| PREDICTED: splicing factor, arginine/serine-rich 9-like [Ailuropoda
melanoleuca]
Length = 253
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 11/84 (13%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L + R +DLE++F +YGRIR++++K FAFV F DPRDA+DA Y NG
Sbjct: 48 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 107
Query: 68 DVDGSRIIVEFAR------GGPRG 85
D R+ VEF R G PRG
Sbjct: 108 DYGQCRLRVEFPRTYGGRAGWPRG 131
>gi|324500331|gb|ADY40159.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 244
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD----FAFVEFSDPRDADDARYSLNG 66
+R+Y+G L S + RDLE++F +YGRI +D+K FAF+EF DPRDA DA + +G
Sbjct: 7 SRIYIGNLPSDVKQRDLEDLFYKYGRINYIDIKLSRGAPFAFIEFDDPRDARDAVHGRDG 66
Query: 67 RDVDGSRIIVEFA 79
D+DG RI VE
Sbjct: 67 YDMDGCRIRVEMT 79
>gi|156545752|ref|XP_001605411.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Nasonia
vitripennis]
Length = 257
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 21/106 (19%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
R+YVG L R++D++++F ++G++ VD+K FAFVEF DPRDA+DA ++ +G
Sbjct: 21 RIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPPFAFVEFDDPRDAEDAVHARDGY 80
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYL---------------GRGPP 98
D DG R+ VEF RGG GP S GRGPP
Sbjct: 81 DYDGYRLRVEFPRGG--GPSSSFRGRGGGDSRGRGDMGNSRGRGPP 124
>gi|357115606|ref|XP_003559579.1| PREDICTED: glycine-rich RNA-binding protein 2-like [Brachypodium
distachyon]
Length = 160
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 62/122 (50%), Gaps = 19/122 (15%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDM--------KRDFAFVEFSDPRDADDARY 62
++++VG L+ T R +E F R+G+I V + R F FV FSDPR A DA
Sbjct: 7 SQIFVGGLSWCTTERTVEGAFRRFGKIVHVQVITERHTGRSRGFGFVIFSDPRAAIDAIM 66
Query: 63 SLNGRDVDGSRIIVEFAR-------GGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWAR 115
++ +++DG I V +A GG G GS GR G G CF CG GHWA
Sbjct: 67 WMHNQELDGHTITVFWANPKVDNADGGRDGYCGS----GRAAGFGGGCCFACGRPGHWAP 122
Query: 116 DC 117
DC
Sbjct: 123 DC 124
>gi|52140013|gb|AAU29334.1| ASF/SF2-like pre-mRNA splicing factor SRP31' [Zea mays]
gi|413944989|gb|AFW77638.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 253
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSL 64
G +YVG L R R+++++F +YGRI ++D+K FAFVEF D RDA+DA Y
Sbjct: 6 GCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAEDAIYGR 65
Query: 65 NGRDVDGSRIIVEFARGG 82
+G + DG R+ VE A GG
Sbjct: 66 DGYNFDGHRLRVELAHGG 83
>gi|380021805|ref|XP_003694747.1| PREDICTED: RNA-binding protein lark-like [Apis florea]
Length = 351
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
T+++VG L T++ + E+F++YG + + D+ R++ FV D +DA LNGR VD
Sbjct: 89 TKIFVGNLTDNTKAPQVRELFAKYGTVVECDIVRNYGFVHLEATGDVNDAIKELNGRMVD 148
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
G + V+ + R+ G G P +C+ CG GHW+++C G
Sbjct: 149 GQAMKVQIS------TSRVRQRPGMGDPE---QCYRCGRGGHWSKECPKG 189
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MP + G ++++G LA +T + D++ +F +YG++ + D+ +++ FV + +A
Sbjct: 1 MPGFSS-VGTFKIFIGNLADKTTNADIKPLFEKYGKVVECDVVKNYGFVHMENEEAGRNA 59
Query: 61 RYSLNGRDVDGSRIIVEFA--RGGPRGP 86
+LNG V G I E A R GP P
Sbjct: 60 IQNLNGHIVHGQEIKCEAAKSRKGPNTP 87
>gi|145476343|ref|XP_001424194.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391257|emb|CAK56796.1| unnamed protein product [Paramecium tetraurelia]
Length = 161
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 16/109 (14%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
R+YV +++ D++ IF+R+G I++ K F F+ ++ P DA DA +N ++V
Sbjct: 13 ANRIYVTGYSTKESEMDIKSIFARHGEIQEFSWKGRFCFIAYTKPEDAADAVRLMNQQEV 72
Query: 70 DGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCK 118
+G +IVE AR + G C+ CG GH+AR+C+
Sbjct: 73 NGRNLIVELARAKKK----------------DGACYQCGKQGHFARNCR 105
>gi|42561847|ref|NP_172386.3| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
gi|4775270|emb|CAB42557.1| SF2/ASF-like splicing modulator Srp30 [Arabidopsis thaliana]
gi|23297699|gb|AAN13011.1| putative SF2/ASF splicing modulator Srp30 [Arabidopsis thaliana]
gi|332190279|gb|AEE28400.1| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
Length = 268
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R ++E++F +YG I D+D+K +AFVEF DPRDADDA Y +G
Sbjct: 9 IYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
D DG R+ VE A GG
Sbjct: 69 DFDGCRLRVEIAHGG 83
>gi|72167806|ref|XP_789638.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Strongylocentrotus purpuratus]
Length = 215
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNG 66
G ++YVG L +LE+ F +G ++ V + R+ FAFVEF DPRDA DA L+
Sbjct: 57 GCKVYVGNLGESASKSELEKEFGSFGPLKSVWIARNPPGFAFVEFDDPRDASDAVKDLDS 116
Query: 67 RDVDGSRIIVEFARG----GPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+ G R VE + G GG GRGPP G +C+ CG GH+ARDC
Sbjct: 117 STICGQRASVELSSGDSRRRGGFRGGGSFRGGRGPPRGDSKCYECGEIGHFARDC 171
>gi|291230089|ref|XP_002735000.1| PREDICTED: RSZp22 protein, putative-like [Saccoglossus kowalevskii]
Length = 182
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 59/114 (51%), Gaps = 13/114 (11%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + ++E FS YG +R+V + R+ FAFVEF DPRDA DA L+
Sbjct: 13 CKVYVGDLGTNGTKHEIERAFSYYGPLRNVWVARNPPGFAFVEFEDPRDASDACRGLDKT 72
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPP----GSGRCFNCGIDGHWARDC 117
+ G I E + G R R PPP RC+ CG GH+ARDC
Sbjct: 73 KLCGVEIRAELSSGKSRWAKWGR------PPPRRSFSEERCYECGKRGHFARDC 120
>gi|3249109|gb|AAC24092.1| Contains similarity to pre-mRNA splicing factor (SF2), P33
subunit gb|M72709 from Homo sapiens. ESTs gb|T42588 and
gb|R65514 come from this gene [Arabidopsis thaliana]
Length = 237
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R ++E++F +YG I D+D+K +AFVEF DPRDADDA Y +G
Sbjct: 9 IYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
D DG R+ VE A GG
Sbjct: 69 DFDGCRLRVEIAHGG 83
>gi|328849877|gb|EGF99050.1| hypothetical protein MELLADRAFT_79554 [Melampsora larici-populina
98AG31]
Length = 259
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G RLY+GR+ D+E+ F RYG + DV + F F+E+ RDA+DA + LNGR+
Sbjct: 5 GRRLYIGRIPQEATRTDIEKYFGRYGTLLDVRIMAGFGFLEYDQVRDAEDAVHDLNGREF 64
Query: 70 DGSRIIVEFARG 81
G R+IVEFA+
Sbjct: 65 MGDRLIVEFAKA 76
>gi|291241385|ref|XP_002740592.1| PREDICTED: RSZp22 protein, putative-like [Saccoglossus kowalevskii]
Length = 179
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 62/114 (54%), Gaps = 7/114 (6%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE+ FS YG +R+V + R+ FAF+EF D RDA DA L+ R
Sbjct: 11 CKVYVGELGTNGTRHELEKAFSYYGPLRNVWVSRNPPGFAFIEFEDARDASDAIRGLDKR 70
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPP----GSGRCFNCGIDGHWARDC 117
V G + VE + G R GG G PP RC+ CG GH+ARDC
Sbjct: 71 RVCGVEVRVELSSGKSRRGGGGGGRGGGRPPQRRSFSEERCYECGKHGHFARDC 124
>gi|79582138|ref|NP_683288.2| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
gi|4775271|emb|CAB42558.1| SF2/ASF-like splicing modulator Srp30, variant 1 [Arabidopsis
thaliana]
gi|332190280|gb|AEE28401.1| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
Length = 256
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R ++E++F +YG I D+D+K +AFVEF DPRDADDA Y +G
Sbjct: 9 IYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
D DG R+ VE A GG
Sbjct: 69 DFDGCRLRVEIAHGG 83
>gi|343426008|emb|CBQ69540.1| related to pre-mrna splicing factor srp55 [Sporisorium reilianum
SRZ2]
Length = 248
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
TR+Y+G+L + R D+E++F YGR+ DV + F FVEF PRDA+DA +G++
Sbjct: 3 TRVYIGKLPADVRRGDIEDLFRDYGRLYDVRIMGSFGFVEFEHPRDAEDAVKDFDGKNFM 62
Query: 71 GSRIIVEFARGGPR 84
G RI+V+ A+ G R
Sbjct: 63 GERILVQHAKSGER 76
>gi|256089261|ref|XP_002580731.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|350646105|emb|CCD59207.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 157
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 71/133 (53%), Gaps = 10/133 (7%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNG 66
GT++Y+G L R+LE IF YGR+R+V + R+ FAFVEF D DA DA L+G
Sbjct: 9 GTKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELDG 68
Query: 67 RDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKC 126
+ G R VE + G R + ++ G +G + GI +R K D ++C
Sbjct: 69 TVMCGVRARVELSTGKSR----QKPWVRGGGGARNGGGRDNGIG---SRRMKPFDPTDRC 121
Query: 127 YRCGERGHIERNC 139
Y CGERGH +C
Sbjct: 122 YECGERGHYAYDC 134
>gi|426247382|ref|XP_004017465.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1 [Ovis
aries]
Length = 226
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYS 63
G R+YVG L S R +DLE++F +YGRI ++++K FAFV F DPRDA+DA Y
Sbjct: 12 GDGRIYVGNLPSDVREKDLEDLFYKYGRISEIELKNRHGLVPFAFVRFEDPRDAEDAIYG 71
Query: 64 LNGRDVDGSRIIVEFAR 80
NG D R+ VEF R
Sbjct: 72 RNGYDYGQCRLRVEFPR 88
>gi|134085783|ref|NP_001076867.1| serine/arginine-rich splicing factor 9 [Bos taurus]
gi|358421698|ref|XP_003585083.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Bos
taurus]
gi|133777441|gb|AAI14700.1| SFRS9 protein [Bos taurus]
gi|296478484|tpg|DAA20599.1| TPA: splicing factor, arginine/serine-rich 9 [Bos taurus]
Length = 221
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYS 63
G R+YVG L S R +DLE++F +YGRI ++++K FAFV F DPRDA+DA Y
Sbjct: 12 GDGRIYVGNLPSDVREKDLEDLFYKYGRISEIELKNRHGLVPFAFVRFEDPRDAEDAIYG 71
Query: 64 LNGRDVDGSRIIVEFAR 80
NG D R+ VEF R
Sbjct: 72 RNGYDYGQCRLRVEFPR 88
>gi|213515460|ref|NP_001133886.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
gi|209155694|gb|ACI34079.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
gi|223649152|gb|ACN11334.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
Length = 252
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 50/74 (67%), Gaps = 5/74 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD-----FAFVEFSDPRDADDARYSLNG 66
R+YVG L + RD+E++F +YG+IRD+++K + FAFV F DPRDA+DA Y NG
Sbjct: 5 RIYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRGTIPFAFVRFEDPRDAEDAVYGRNG 64
Query: 67 RDVDGSRIIVEFAR 80
+ S++ VE+ R
Sbjct: 65 YGLGDSKLRVEYPR 78
>gi|297814065|ref|XP_002874916.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
gi|297320753|gb|EFH51175.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++FS+YG + +D+K +AFVEF D RDADDA Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGY 68
Query: 68 DVDGSRIIVEFARGGPR 84
D DG R+ VE A GG R
Sbjct: 69 DFDGHRLRVELAHGGRR 85
>gi|108708089|gb|ABF95884.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
gi|215692748|dbj|BAG88168.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192809|gb|EEC75236.1| hypothetical protein OsI_11526 [Oryza sativa Indica Group]
gi|222624911|gb|EEE59043.1| hypothetical protein OsJ_10806 [Oryza sativa Japonica Group]
Length = 286
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 6/82 (7%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K +AFVEF DPRDA++A +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGY 68
Query: 68 DVDGSRIIVEFARGGPRGPGGS 89
+ DG R+ VE A GG RG GGS
Sbjct: 69 NFDGHRLRVEPAHGG-RGNGGS 89
>gi|410904228|ref|XP_003965594.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Takifugu
rubripes]
Length = 227
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%), Gaps = 5/74 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD-----FAFVEFSDPRDADDARYSLNG 66
R+YVG L + RD+E++F +YG+IR++++K + FAF+ F DPRDADDA Y NG
Sbjct: 5 RIYVGNLPMDVQERDIEDLFYKYGKIREIELKNNRGTIPFAFIRFEDPRDADDAVYGRNG 64
Query: 67 RDVDGSRIIVEFAR 80
S++ VE+ R
Sbjct: 65 YVYGDSKLRVEYPR 78
>gi|326495240|dbj|BAJ85716.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326504388|dbj|BAJ91026.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510429|dbj|BAJ87431.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523109|dbj|BAJ88595.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 53/81 (65%), Gaps = 6/81 (7%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R +E++F +YGRI D+D+K +AFVEF DPRDA+DA +G
Sbjct: 9 IYVGNLPGDIRERAVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAEDACAGRDGY 68
Query: 68 DVDGSRIIVEFARGGPRGPGG 88
+ DG+R+ VE A GG RG GG
Sbjct: 69 NFDGNRLRVEPAHGG-RGSGG 88
>gi|410913465|ref|XP_003970209.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Takifugu rubripes]
Length = 383
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 14/89 (15%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE+ FS+YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETTEKALEQFFSKYGRIAEVLLMKDRETNKSRGFAFVTFESPSDAKDAARE 68
Query: 64 LNGRDVDGSRIIVE------FARGGPRGP 86
+NG+ +DG I VE F GG RGP
Sbjct: 69 MNGKSLDGKNIKVEQATKPQFESGGRRGP 97
>gi|338721826|ref|XP_001500325.3| PREDICTED: serine/arginine-rich splicing factor 4 [Equus
caballus]
Length = 497
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 37/48 (77%)
Query: 34 YGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 81
YG+I +VD+K + FVEF D RDADDA Y LNG+D+ G R+IVE ARG
Sbjct: 21 YGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG 68
>gi|410913463|ref|XP_003970208.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Takifugu rubripes]
Length = 391
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 14/89 (15%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE+ FS+YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETTEKALEQFFSKYGRIAEVLLMKDRETNKSRGFAFVTFESPSDAKDAARE 68
Query: 64 LNGRDVDGSRIIVE------FARGGPRGP 86
+NG+ +DG I VE F GG RGP
Sbjct: 69 MNGKSLDGKNIKVEQATKPQFESGGRRGP 97
>gi|72167808|ref|XP_789661.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Strongylocentrotus purpuratus]
gi|390364611|ref|XP_003730646.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Strongylocentrotus purpuratus]
Length = 190
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 65/119 (54%), Gaps = 11/119 (9%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNG 66
G ++YVG L +LE+ F R+G ++ V + R+ FAFVE+ DPRDA DA ++
Sbjct: 31 GCKVYVGNLGESASKSELEKEFGRFGPLKSVWIARNPAGFAFVEYEDPRDASDAVKDMDS 90
Query: 67 RDVDGSRIIVEFARG--------GPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+ G R VE + G G G GG GRGPP G +C+ CG GH+ARDC
Sbjct: 91 STICGQRARVELSSGDSRRRGFRGGGGGGGGSFRGGRGPPRGDSKCYECGETGHFARDC 149
>gi|403376343|gb|EJY88148.1| hypothetical protein OXYTRI_18935 [Oxytricha trifallax]
Length = 208
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 14/119 (11%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGS 72
L+VG ++ R +L + F ++G ++ K +AF+EF D RDA+DA LNGR+ G
Sbjct: 3 LFVGNISRSMRQDELHDEFDKFGSC-SINFKGSYAFIEFKDERDAEDALTELNGREFSGQ 61
Query: 73 RIIVEFARGGPRGPGGSREYLGRGPPPGSGR-------------CFNCGIDGHWARDCK 118
R+ +E+++ R + G CFNCG GH+ARDC+
Sbjct: 62 RLAIEWSKKSGRFDAANASRGRGRDSRDRGSDRGRGGDRGGNKDCFNCGKPGHFARDCR 120
>gi|170591727|ref|XP_001900621.1| SF2 [Brugia malayi]
gi|158591773|gb|EDP30376.1| SF2, putative [Brugia malayi]
Length = 298
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMK--RD--FAFVEFSDPRDADDARYSLNGR 67
R++VG L S + RDLE+IF +YGRI +D+K RD FAF+EF DPRDA DA + +G
Sbjct: 8 RVFVGNLPSDVKQRDLEDIFYKYGRINFIDIKFTRDVPFAFIEFDDPRDARDAVHGRDGY 67
Query: 68 DVDGSRIIVEFA 79
D DG RI VE
Sbjct: 68 DFDGCRIRVELT 79
>gi|324504398|gb|ADY41900.1| Serine/arginine-rich splicing factor 1 [Ascaris suum]
Length = 233
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD----FAFVEFSDPRDADDARYSLNG 66
+R+YVG L + R++D+E+IF+++G++ VD+K FAFVEF DPRDA+DA S +G
Sbjct: 5 SRIYVGNLPTSVRTKDIEDIFTKFGKVLFVDLKDKRPPYFAFVEFEDPRDAEDAVRSRDG 64
Query: 67 RDVDGSRIIVEF 78
D G R+ VEF
Sbjct: 65 YDFYGYRLRVEF 76
>gi|260833612|ref|XP_002611806.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
gi|229297178|gb|EEN67815.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
Length = 175
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD----FAFVEFSDPRDADDARYSLNGR 67
R+YVG L R D++++F +YG+I VD+K FAFVEF D RDADDA Y +G
Sbjct: 7 RIYVGNLPPEVRQEDIKDVFYKYGKIIHVDLKIGRGPPFAFVEFEDKRDADDAVYGRDGY 66
Query: 68 DVDGSRIIVEFARG 81
+DG R+ VEF RG
Sbjct: 67 TLDGYRLRVEFPRG 80
>gi|157138308|ref|XP_001657237.1| RNA binding motif protein 4,lark [Aedes aegypti]
gi|108869514|gb|EAT33739.1| AAEL013982-PA [Aedes aegypti]
Length = 330
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 15/121 (12%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
T+++VG L TR+ + E+F +YG + + D+ R++ FV D ++A LNG VD
Sbjct: 86 TKIFVGNLTDVTRAPQVRELFQKYGTVVECDIVRNYGFVHLDPTGDVNEAIRELNGMMVD 145
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSG---RCFNCGIDGHWARDCKAGDWKNKCY 127
G + V+ + R P PG G C+ CG GHW+++C W +
Sbjct: 146 GQPMKVQVSTSRVR------------PKPGMGDPEMCYRCGRSGHWSKECPRLLWSESRF 193
Query: 128 R 128
R
Sbjct: 194 R 194
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRD 68
G +L++G + +T+ DL +F +YG + + D+ +++ FV + DA +L+G
Sbjct: 5 GTFKLFIGNVDEKTQPSDLRPLFEKYGTVVECDVVKNYGFVHMENEDQGRDAIQNLDGYV 64
Query: 69 VDGSRIIVEFAR 80
V+G I VE AR
Sbjct: 65 VNGKAIKVEAAR 76
>gi|225718228|gb|ACO14960.1| Serine-arginine protein 55 [Caligus clemensi]
Length = 355
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-DFAFVEFSDPRDADDARYSLNGRD 68
G+R+++G L R RD+E F RYGR+ ++ +K + F EF D RDADDA Y LNG +
Sbjct: 6 GSRVFLGNLPYSVRERDIERFFERYGRVYNIFIKSGKYGFCEFDDYRDADDAVYKLNGGE 65
Query: 69 VDGSRIIVEFA 79
++G RI VE A
Sbjct: 66 LNGERITVEHA 76
>gi|156354446|ref|XP_001623405.1| predicted protein [Nematostella vectensis]
gi|156210100|gb|EDO31305.1| predicted protein [Nematostella vectensis]
Length = 137
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 12/110 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
+R+Y+G + R++E F +G +RDV + R+ FAF F D RDA+DA L+GR
Sbjct: 2 SRVYIGNIGDNASKREIEREFETFGPLRDVWVARNPPGFAFCVFEDRRDAEDAVRELDGR 61
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+ G R VE A+G R GR + +C+ CG GH+ARDC
Sbjct: 62 YICGQRARVELAKGPSR---------GRPRQASNEKCYECGRVGHFARDC 102
>gi|170588713|ref|XP_001899118.1| SF2 [Brugia malayi]
gi|158593331|gb|EDP31926.1| SF2, putative [Brugia malayi]
Length = 228
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNG 66
+R+YVG L + R++D+E+IFS+YGR+ VD+K FAFVEF D RDA+DA +G
Sbjct: 5 SRIYVGNLPTTVRAKDVEDIFSKYGRVLYVDLKDRRQPYFAFVEFEDARDAEDAVRGRDG 64
Query: 67 RDVDGSRIIVEF 78
D +G R+ VEF
Sbjct: 65 YDYEGYRLRVEF 76
>gi|402587972|gb|EJW81906.1| splicing factor [Wuchereria bancrofti]
Length = 228
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNG 66
+R+YVG L + R++D+E+IFS+YGR+ VD+K FAFVEF D RDA+DA +G
Sbjct: 5 SRIYVGNLPTTVRAKDVEDIFSKYGRVLYVDLKDRRQPYFAFVEFEDARDAEDAVRGRDG 64
Query: 67 RDVDGSRIIVEF 78
D +G R+ VEF
Sbjct: 65 YDYEGYRLRVEF 76
>gi|194376808|dbj|BAG57550.1| unnamed protein product [Homo sapiens]
Length = 125
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD-----FAFVEFSDPRDADDARYS 63
G R+YVG L + R +DLE++F +YGRIR++++K FAFV F DPRDA+DA Y
Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYG 71
Query: 64 LNGRDVDGSRIIVEFAR 80
NG D R+ VEF R
Sbjct: 72 RNGYDYGQCRLRVEFPR 88
>gi|47225325|emb|CAG09825.1| unnamed protein product [Tetraodon nigroviridis]
Length = 391
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 14/89 (15%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE+ FS+YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETTEKALEQFFSKYGRIAEVILMKDRETNKSRGFAFVTFESPSDAKDAARE 68
Query: 64 LNGRDVDGSRIIVE------FARGGPRGP 86
+NG+ +DG I VE F GG RGP
Sbjct: 69 MNGKSLDGKNIKVEQATKPQFESGGRRGP 97
>gi|392597031|gb|EIW86353.1| hypothetical protein CONPUDRAFT_133797 [Coniophora puteana
RWD-64-598 SS2]
Length = 453
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
++YVG L T++ DL+ F + G I +++K F FVEF A+++ N
Sbjct: 83 ANKVYVGGLPEHTQTEDLQNCFGKLGSIVAIELKTGFGFVEFDSREAAEESVAKYNEGYF 142
Query: 70 DGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGD 121
G++I VE + SR + + CF CG GHWAR+C GD
Sbjct: 143 MGNKIRVELSH--------SRGRITKHVSSDPSACFKCGQPGHWARECPNGD 186
>gi|426247384|ref|XP_004017466.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2 [Ovis
aries]
Length = 200
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYS 63
G R+YVG L S R +DLE++F +YGRI ++++K FAFV F DPRDA+DA Y
Sbjct: 12 GDGRIYVGNLPSDVREKDLEDLFYKYGRISEIELKNRHGLVPFAFVRFEDPRDAEDAIYG 71
Query: 64 LNGRDVDGSRIIVEFAR 80
NG D R+ VEF R
Sbjct: 72 RNGYDYGQCRLRVEFPR 88
>gi|449485688|ref|XP_004157245.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 322
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YG I D+D+K +AFVEF D RDA+DA Y +G
Sbjct: 9 IYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAEDAIYGRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
DG R+ VEFA GG
Sbjct: 69 KFDGCRLRVEFAHGG 83
>gi|145533591|ref|XP_001452540.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420239|emb|CAK85143.1| unnamed protein product [Paramecium tetraurelia]
Length = 234
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+YV + + D++++F ++G+I + K + F+EF DP DA+ A +N +V G
Sbjct: 18 RVYVTGYSLKEDQHDIKKLFKKFGKIEEFAWKGKYCFIEFKDPEDAEKAVKKMNKEEVKG 77
Query: 72 SRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWAR 115
S + VE ARG P +G C++CG GH R
Sbjct: 78 SVLQVEMARGNK-------------PSKNNGLCYSCGHSGHLIR 108
>gi|225706912|gb|ACO09302.1| Splicing factor, arginine/serine-rich 7 [Osmerus mordax]
Length = 208
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE FS YG +R V + R+ FAFVE+ D RDA+DA ++G+
Sbjct: 15 CKVYVGDLGNGAAKGELERAFSYYGPLRSVWVARNPPGFAFVEYEDTRDAEDAVKGMDGK 74
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+ G+RI VE + G R R P + RC+ CG GH+A DC
Sbjct: 75 VLCGARIRVELSTGMSRKSRYGRPSRRNFDP--NDRCYQCGESGHYAYDC 122
>gi|307103808|gb|EFN52065.1| hypothetical protein CHLNCDRAFT_36976 [Chlorella variabilis]
Length = 302
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 5/78 (6%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSL 64
G +YVG L R R++E++FS+YG++ +DMK FAFVEF+DPRDA+DA
Sbjct: 9 GCLVYVGNLPDDIREREVEDLFSKYGKVVSIDMKAPVRPPAFAFVEFADPRDAEDAVRGR 68
Query: 65 NGRDVDGSRIIVEFARGG 82
+G D G+R+ VE A+G
Sbjct: 69 DGYDFYGNRLRVELAKGA 86
>gi|432877559|ref|XP_004073159.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Oryzias latipes]
Length = 386
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 65/134 (48%), Gaps = 36/134 (26%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE+ FS+YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETTEKALEQYFSKYGRIVEVILMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 64 LNGRDVDGSRIIVEFA--------------------RGGPRGPGGSR--EYLGRGPP--- 98
+NG+ +DG I VE A RG PRGP GSR RGPP
Sbjct: 69 MNGKSLDGKPIKVEQATKPQFESAGRRGPPSNYSRSRGPPRGPRGSRGGPSGMRGPPRDY 128
Query: 99 ---PGSGRCFNCGI 109
PGSG F G+
Sbjct: 129 YDSPGSGDPFFKGM 142
>gi|30679138|ref|NP_849537.1| splicing factor SR1B [Arabidopsis thaliana]
gi|26451203|dbj|BAC42705.1| unknown protein [Arabidopsis thaliana]
gi|332656771|gb|AEE82171.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 178
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++FS+YG + +D+K +AFVEF D RDADDA Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGY 68
Query: 68 DVDGSRIIVEFARGGPR 84
D DG + VE A GG R
Sbjct: 69 DFDGHHLRVELAHGGRR 85
>gi|242010923|ref|XP_002426207.1| transformer-2 sex-determining protein, putative [Pediculus humanus
corporis]
gi|212510258|gb|EEB13469.1| transformer-2 sex-determining protein, putative [Pediculus humanus
corporis]
Length = 173
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 70/143 (48%), Gaps = 24/143 (16%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDA 57
M RY D ++YVG L S ++LE+ F YG +R+V + R+ FAFVEF DPRDA
Sbjct: 1 MSRYRDSGSDCKVYVGDLGSSASKQELEDAFGYYGPLRNVWVARNPPGFAFVEFEDPRDA 60
Query: 58 DDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
DDA L+GR V G R+ VE P +G G R
Sbjct: 61 DDAVRGLDGRTVCGRRVRVE---------------------PSNGMGGRRRDRGPPPRRG 99
Query: 118 KAGDWKNKCYRCGERGHIERNCQ 140
+ + ++CY CGERGH R+C
Sbjct: 100 RPFNPDDRCYECGERGHYARDCN 122
>gi|221112058|ref|XP_002166471.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Hydra magnipapillata]
Length = 206
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 67/115 (58%), Gaps = 16/115 (13%)
Query: 11 TRLYVGRL---ASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSL 64
+R+++G L ASRT +LE F +G +R+V + R+ F F+ F DPRDA+DA +
Sbjct: 2 SRIFIGGLPDDASRT---ELEREFEHFGSMREVWVARNPPGFGFIVFDDPRDAEDAIREM 58
Query: 65 NGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKA 119
+GR V G R+ VE AR GP +R + +C+NCG GH +RDC++
Sbjct: 59 DGRRVCGMRVRVEKAR-GPNSNNRNR------SSAQNEKCYNCGKIGHLSRDCRS 106
>gi|241846316|ref|XP_002415562.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215509774|gb|EEC19227.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 355
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 56/88 (63%), Gaps = 7/88 (7%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
TR+Y+G L+ R R RDLE+ F +G+IR+V +K F FVEF D RDADDA Y LNGR++D
Sbjct: 4 TRVYIGHLSYRVRERDLEKFFRGFGKIREVLLKNGFGFVEFDDDRDADDAVYELNGRELD 63
Query: 71 GSRIIVEFAR------GGPRGPGGSREY 92
G R R G PR PG ++ Y
Sbjct: 64 GERYFTTLGRRAGSRNGTPR-PGCAQLY 90
>gi|449672683|ref|XP_004207769.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Hydra magnipapillata]
Length = 189
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 67/115 (58%), Gaps = 16/115 (13%)
Query: 11 TRLYVGRL---ASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSL 64
+R+++G L ASRT +LE F +G +R+V + R+ F F+ F DPRDA+DA +
Sbjct: 2 SRIFIGGLPDDASRT---ELEREFEHFGSMREVWVARNPPGFGFIVFDDPRDAEDAIREM 58
Query: 65 NGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKA 119
+GR V G R+ VE AR GP +R + +C+NCG GH +RDC++
Sbjct: 59 DGRRVCGMRVRVEKAR-GPNSNNRNR------SSAQNEKCYNCGKIGHLSRDCRS 106
>gi|91085405|ref|XP_967263.1| PREDICTED: similar to GA20008-PA [Tribolium castaneum]
gi|270009156|gb|EFA05604.1| hypothetical protein TcasGA2_TC015810 [Tribolium castaneum]
Length = 226
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 50/71 (70%), Gaps = 4/71 (5%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
R+YVG L R++D++++F ++G++ VD+K FAFVEF DPRDADDA ++ +G
Sbjct: 9 RIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPPFAFVEFEDPRDADDAVHARDGY 68
Query: 68 DVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 69 DYDGYRLRVEF 79
>gi|402219133|gb|EJT99207.1| hypothetical protein DACRYDRAFT_23817 [Dacryopinax sp. DJM-731 SS1]
Length = 319
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 65/120 (54%), Gaps = 4/120 (3%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+Y+G++ +D+E+ F YGRI+D+ + F FVEF +P+DA+D + G+++ G
Sbjct: 5 RIYIGKMPRDAMKQDIEKFFEGYGRIQDIRIMNGFGFVEFENPKDAEDVVANFQGKNLLG 64
Query: 72 SRIIVEFARGGPRGPGGSREYLGRGPPPGSGR-CFNCGIDGHWARDCKAGDWKNKCYRCG 130
II+E A+ R GG E RGP P + R + I G +RD D K+ G
Sbjct: 65 EPIIIELAKESRRERGGGFE--ERGPRPFTRRPGYRVLIHG-VSRDTSWQDLKDFGREAG 121
>gi|322797564|gb|EFZ19608.1| hypothetical protein SINV_13630 [Solenopsis invicta]
Length = 324
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
T+++VG L T++ + E+F++YG + + D+ R++ FV D +DA LNG+ VD
Sbjct: 89 TKIFVGNLTDNTKAPQVRELFAKYGTVVECDIVRNYGFVHLEATGDVNDAIKELNGQIVD 148
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
G + V+ + R+ G G P +C+ CG GHW+++C G
Sbjct: 149 GQPMKVQIS------TSRVRQRPGMGDPE---QCYRCGRGGHWSKECPKG 189
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MP + G ++++G LA +T + D++ +F +YG++ + D+ +++ FV + +A
Sbjct: 1 MPGFSS-VGTFKIFIGNLADKTSNADIKPLFEKYGKVVECDVVKNYGFVHMENEEAGRNA 59
Query: 61 RYSLNGRDVDGSRIIVEFA--RGGPRGP 86
+LNG V G I E A R GP P
Sbjct: 60 IQNLNGHMVHGQPIKCEAAKSRKGPNTP 87
>gi|307195687|gb|EFN77529.1| RNA-binding protein lark [Harpegnathos saltator]
Length = 325
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
T+++VG L T++ + E+F++YG + + D+ R++ FV D +DA LNG+ VD
Sbjct: 89 TKIFVGNLTDNTKAPQVRELFAKYGTVVECDIVRNYGFVHLEATGDVNDAIKELNGQIVD 148
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
G + V+ + R+ G G P +C+ CG GHW+++C G
Sbjct: 149 GQPMKVQIS------TSRVRQRPGMGDPE---QCYRCGRGGHWSKECPKG 189
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MP + G ++++G LA +T + D++ +F +YG++ + D+ +++ FV + +A
Sbjct: 1 MPGFSS-VGTFKIFIGNLADKTSNADIKPLFEKYGKVVECDVVKNYGFVHMENEEAGRNA 59
Query: 61 RYSLNGRDVDGSRIIVEFA--RGGPRGP 86
+LNG V G I E A R GP P
Sbjct: 60 IQNLNGHMVHGQPIKCEAAKSRKGPNTP 87
>gi|209737830|gb|ACI69784.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
gi|209738644|gb|ACI70191.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 200
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR--DFAFVEFSDPRDADDARYSLNGRD 68
++YVG + + DLE FS+YG +R V + R F FVE++D RDA+DA ++G+
Sbjct: 16 CKVYVGDIVNGATMCDLEREFSQYGPLRSVWVARPPVFGFVEYADARDAEDAVKGMDGKV 75
Query: 69 VDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCK 118
V GSRI VE AR ++ GRC CG GH+A +C+
Sbjct: 76 VWGSRIHVELAR------KAKHDHPSNHHIDPQGRCNQCGNRGHYAYNCE 119
>gi|112983834|ref|NP_001037293.1| RNA-binding protein lark [Bombyx mori]
gi|57236850|gb|AAW48898.1| lark-PA [Bombyx mori]
Length = 343
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 9/107 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
T+++VG L +TR+ ++ E+F ++G + + D+ R++ FV D +DA LNG VD
Sbjct: 86 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVD 145
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
G + V+ + R+ G G P +C+ CG GHW+++C
Sbjct: 146 GQPMKVQLS------TSRVRQRPGMGDPE---QCYRCGRGGHWSKEC 183
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRD 68
G ++++G L+ +T DL +F +YG + + D+ R++ FV + + +A +LNG
Sbjct: 5 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGEL 64
Query: 69 VDGSRIIVEFAR 80
V G I +E A+
Sbjct: 65 VHGQAIKIEAAK 76
>gi|327284522|ref|XP_003226986.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Anolis
carolinensis]
Length = 195
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
+Y+G L+++ R++E F YG+I +VD+K + F+EF D DADDA + LNG+D+ G
Sbjct: 3 HVYIGHLSNQAHKRNMEP-FKGYGKIVEVDLKNGYGFLEFGDVCDADDAVHELNGKDLCG 61
Query: 72 SRIIVEFARG 81
+IVE G
Sbjct: 62 DHVIVEHTWG 71
>gi|307187784|gb|EFN72750.1| RNA-binding protein lark [Camponotus floridanus]
Length = 331
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
T+++VG L T++ + E+F++YG + + D+ R++ FV D +DA LNG+ VD
Sbjct: 89 TKIFVGNLTDNTKAPQVRELFAKYGTVVECDIVRNYGFVHLEATGDVNDAIKELNGQIVD 148
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
G + V+ + R+ G G P +C+ CG GHW+++C G
Sbjct: 149 GQPMKVQIS------TSRVRQRPGMGDPE---QCYRCGRGGHWSKECPKG 189
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MP + G ++++G LA +T + D++ +F +YG++ + D+ +++ FV + +A
Sbjct: 1 MPGFSS-VGTFKIFIGNLADKTSNADIKPLFEKYGKVVECDVVKNYGFVHMENEEAGRNA 59
Query: 61 RYSLNGRDVDGSRIIVEFA--RGGPRGP 86
+LNG V G I E A R GP P
Sbjct: 60 IQNLNGHMVHGQPIKCEAAKSRKGPNTP 87
>gi|312088410|ref|XP_003145851.1| arginine/serine-rich splicing factor 3 [Loa loa]
gi|307758983|gb|EFO18217.1| arginine/serine-rich splicing factor 3 [Loa loa]
Length = 228
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNG 66
+R+YVG L + R++D+E+IFS+YG++ VD+K FAFVEF D RDA+DA +G
Sbjct: 5 SRIYVGNLPTTVRAKDVEDIFSKYGKVLYVDLKDRRQPYFAFVEFEDARDAEDAVRGRDG 64
Query: 67 RDVDGSRIIVEF 78
D +G R+ VEF
Sbjct: 65 YDYEGYRLRVEF 76
>gi|145533360|ref|XP_001452430.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420118|emb|CAK85033.1| unnamed protein product [Paramecium tetraurelia]
Length = 189
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 15/96 (15%)
Query: 25 RDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGSRI---IVEFARG 81
+D++EIF +YG I+DV K ++FV FS+ ++A DA + NG+ +G ++ +V+ +G
Sbjct: 23 KDIKEIFKKYGTIKDVAYKGSYSFVTFSNEQEAQDALKATNGQTYNGQKLKVDVVDNKKG 82
Query: 82 GPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
GP +CF C GHWAR+C
Sbjct: 83 RKTGPN------------DEDKCFKCSKGGHWARNC 106
>gi|262401189|gb|ACY66497.1| splicing factor arginine/serine-rich 7 [Scylla paramamosain]
Length = 119
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 25/132 (18%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L S ++LEE FS YG +R+V + R+ FAFVEF D RDA+DA L+GR
Sbjct: 7 CKVYVGDLGSGASKQELEEAFSYYGPLRNVWVARNPPGFAFVEFEDVRDAEDAVRGLDGR 66
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCY 127
+ G R+ VE + G R P +++CY
Sbjct: 67 TICGRRVRVELSTGKSRNRFRGPPPRRGRPFHP----------------------EDRCY 104
Query: 128 RCGERGHIERNC 139
CGERGH R+C
Sbjct: 105 ECGERGHYARDC 116
>gi|30679143|ref|NP_567235.3| splicing factor SR1B [Arabidopsis thaliana]
gi|332656770|gb|AEE82170.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 278
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++FS+YG + +D+K +AFVEF D RDADDA Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGY 68
Query: 68 DVDGSRIIVEFARGGPR 84
D DG + VE A GG R
Sbjct: 69 DFDGHHLRVELAHGGRR 85
>gi|218188085|gb|EEC70512.1| hypothetical protein OsI_01613 [Oryza sativa Indica Group]
Length = 447
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 50/78 (64%), Gaps = 11/78 (14%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K +AFVEF DPRDADDA + GR
Sbjct: 198 IYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDA---ICGR 254
Query: 68 D---VDGSRIIVEFARGG 82
D DG R+ VE A GG
Sbjct: 255 DRYNFDGYRLRVELAHGG 272
>gi|168000741|ref|XP_001753074.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695773|gb|EDQ82115.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 279
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 17/94 (18%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K + F+EF D RDA+DA +G
Sbjct: 9 IYVGNLPGDVREREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDARDAEDAIRGRDGY 68
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS 101
+ DG+R+ VE A G GRGPPP S
Sbjct: 69 NFDGNRLRVEIAHG------------GRGPPPAS 90
>gi|297264540|ref|XP_001103237.2| PREDICTED: splicing factor, arginine/serine-rich 1-like [Macaca
mulatta]
Length = 300
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF D RDA+D Y +G
Sbjct: 69 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDLRDAEDVVYGRDG 128
Query: 67 RDVDGSRIIVEF 78
D G R+ VEF
Sbjct: 129 YDYYGYRLRVEF 140
>gi|209153932|gb|ACI33198.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 223
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE FS YG +R V + R+ FAFVE+ D RDA+DA ++G+
Sbjct: 16 CKVYVGDLGNGAAKGELERAFSYYGPLRTVWVARNPPGFAFVEYEDARDAEDAVKGMDGK 75
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+ GSRI VE + G R R P RC+ CG GH+A DC
Sbjct: 76 VLCGSRIRVELSTGMSRKTKHGRPSRRHFDP--QDRCYQCGDRGHYAYDC 123
>gi|3193304|gb|AAC19288.1| T14P8.21 [Arabidopsis thaliana]
gi|7269003|emb|CAB80736.1| AT4g02430 [Arabidopsis thaliana]
Length = 294
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++FS+YG + +D+K +AFVEF D RDADDA Y +G
Sbjct: 9 IYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGY 68
Query: 68 DVDGSRIIVEFARGGPR 84
D DG + VE A GG R
Sbjct: 69 DFDGHHLRVELAHGGRR 85
>gi|409082207|gb|EKM82565.1| hypothetical protein AGABI1DRAFT_111169 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200034|gb|EKV49958.1| hypothetical protein AGABI2DRAFT_190388 [Agaricus bisporus var.
bisporus H97]
Length = 289
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 46/69 (66%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
RLY+GRL RS D+++ F +GRI D + F FVEF P+DA++A ++ NG+ G
Sbjct: 4 RLYLGRLPPDARSEDVQKFFDGFGRIIDCRVMTGFGFVEFESPKDAEEAVHTFNGKSFMG 63
Query: 72 SRIIVEFAR 80
+ I+VEFA+
Sbjct: 64 ANIVVEFAK 72
>gi|332031363|gb|EGI70876.1| RNA-binding protein lark [Acromyrmex echinatior]
Length = 355
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
T+++VG L T++ + E+F++YG + + D+ R++ FV D +DA LNG+ VD
Sbjct: 89 TKIFVGNLTDNTKAPQVRELFAKYGTVVECDIVRNYGFVHLEATGDVNDAIKELNGQIVD 148
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
G + V+ + R+ G G P +C+ CG GHW+++C G
Sbjct: 149 GQPMKVQIS------TSRVRQRPGMGDPE---QCYRCGRGGHWSKECPKG 189
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRD 68
G ++++G LA +T + D++ +F +YG++ + D+ +++ FV + +A +LNG
Sbjct: 8 GTFKIFIGNLADKTSNADIKPLFEKYGKVVECDVVKNYGFVHMENEEAGRNAIQNLNGHM 67
Query: 69 VDGSRIIVEFA--RGGPRGP 86
V G I E A R GP P
Sbjct: 68 VHGQPIKCEAAKSRKGPNTP 87
>gi|209735146|gb|ACI68442.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 200
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR--DFAFVEFSDPRDADDARYSLNGRD 68
++YVG + + DLE FS+YG +R V + R F FVE++D RDA+DA ++G+
Sbjct: 16 CKVYVGDIVNGATMCDLEREFSQYGPLRSVWVARPPVFGFVEYADARDAEDAVKGMDGKV 75
Query: 69 VDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCK 118
V GSRI VE AR ++ GRC CG GH+A +C+
Sbjct: 76 VWGSRIHVELAR------KAKHDHPSNHHIDPQGRCNQCGNRGHYAYNCE 119
>gi|196009125|ref|XP_002114428.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190583447|gb|EDV23518.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 247
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
TR+Y+G L S ++E+ F+RYG ++DV + R+ FAFV F DP DA DA +L+GR
Sbjct: 5 TRVYIGNLGSGAAKHEIEKEFARYGPLKDVWIARNPPGFAFVVFDDPLDAQDAVEALDGR 64
Query: 68 DVDGSRIIVEFARG 81
+ G+R+ VE ARG
Sbjct: 65 RLCGARVRVEIARG 78
>gi|345309522|ref|XP_001517768.2| PREDICTED: serine/arginine-rich splicing factor 5-like, partial
[Ornithorhynchus anatinus]
Length = 251
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 40/53 (75%)
Query: 25 RDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVE 77
+D+E F YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++ R+ +E
Sbjct: 2 KDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCSERVTIE 54
>gi|383848340|ref|XP_003699809.1| PREDICTED: RNA-binding protein lark-like [Megachile rotundata]
Length = 351
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
T+++VG L T++ + E+F++YG + + D+ R++ FV D +DA LNG+ VD
Sbjct: 89 TKIFVGNLTDNTKAPQVRELFAKYGTVVECDIVRNYGFVHLEATGDVNDAIKELNGQMVD 148
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
G + V+ + R+ G G P +C+ CG GHW+++C G
Sbjct: 149 GQPMKVQIS------TSRVRQRPGMGDPE---QCYRCGRGGHWSKECPKG 189
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MP + G ++++G LA +T + D++ +F +YG++ + D+ +++ FV + +A
Sbjct: 1 MPGFSS-VGTFKIFIGNLADKTSNADIKPLFEKYGKVVECDVVKNYGFVHMENEEAGRNA 59
Query: 61 RYSLNGRDVDGSRIIVEFA--RGGPRGP 86
+LNG+ V G I E A R GP P
Sbjct: 60 IQNLNGQIVHGQPIKCEAAKSRKGPNTP 87
>gi|357631525|gb|EHJ78995.1| hypothetical protein KGM_15683 [Danaus plexippus]
Length = 249
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 4/71 (5%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
R+YVG L R++D++++F ++G++ VD+K FAFVEF DPRDADDA + +G
Sbjct: 13 RIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRKGPPFAFVEFEDPRDADDAVRARDGY 72
Query: 68 DVDGSRIIVEF 78
D DG R+ VEF
Sbjct: 73 DYDGYRLRVEF 83
>gi|301093774|ref|XP_002997732.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109981|gb|EEY68033.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 226
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 55/96 (57%), Gaps = 14/96 (14%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDAR 61
G LYV LA+R +DL+++FS++GR+ ++ D F FV F D RDA+DA
Sbjct: 64 GNNLYVANLATRVGQQDLQDLFSKFGRVEKCEVIVDPVTKESRGFGFVTFEDVRDAEDAV 123
Query: 62 YSLNGRDVDGSRIIVEFA---RGGPRGPGGSREYLG 94
LN ++V G ++ VE A RG + PG +YLG
Sbjct: 124 KELNNQEVQGRKMRVEHAKRKRGHEKTPG---QYLG 156
>gi|410988846|ref|XP_004000688.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Felis
catus]
Length = 164
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA LNGR
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELNGR 69
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 102
+ G R+ VE + G R SR RGPPP G
Sbjct: 70 TLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|108708090|gb|ABF95885.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
Length = 236
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 6/82 (7%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K +AFVEF DPRDA++A +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGY 68
Query: 68 DVDGSRIIVEFARGGPRGPGGS 89
+ DG R+ VE A GG RG GGS
Sbjct: 69 NFDGHRLRVEPAHGG-RGNGGS 89
>gi|115452963|ref|NP_001050082.1| Os03g0344100 [Oryza sativa Japonica Group]
gi|113548553|dbj|BAF11996.1| Os03g0344100 [Oryza sativa Japonica Group]
Length = 264
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 6/82 (7%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K +AFVEF DPRDA++A +G
Sbjct: 9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGY 68
Query: 68 DVDGSRIIVEFARGGPRGPGGS 89
+ DG R+ VE A GG RG GGS
Sbjct: 69 NFDGHRLRVEPAHGG-RGNGGS 89
>gi|72026975|ref|XP_787177.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Strongylocentrotus purpuratus]
Length = 192
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 65/124 (52%), Gaps = 17/124 (13%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L S +LEE FSRYGR+++V + R+ FAFV F D RDA DA +L+ R
Sbjct: 16 CKVYVGNLPSGASRTELEEAFSRYGRVKNVWVARNPPGFAFVMFEDERDASDACKALDDR 75
Query: 68 DVDGSRIIVEFARG--------------GPRGPGGSREYLGRGPPPGSGRCFNCGIDGHW 113
+V G R+ VE + G GG RG + RC+ CG GH+
Sbjct: 76 NVCGVRVRVEMSSGESRRSRDRGDRGGDRGHRGGGGFMGGRRGGMRDNERCYECGQRGHF 135
Query: 114 ARDC 117
ARDC
Sbjct: 136 ARDC 139
>gi|302781020|ref|XP_002972284.1| hypothetical protein SELMODRAFT_97566 [Selaginella
moellendorffii]
gi|300159751|gb|EFJ26370.1| hypothetical protein SELMODRAFT_97566 [Selaginella
moellendorffii]
Length = 288
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R +++++F +YGRI D+D+K +AF+EF DPRDA+DA + +G
Sbjct: 8 IYVGNLPGDVRESEIDDLFYKYGRILDIDLKLPPRPPGYAFIEFDDPRDAEDAIKARDGY 67
Query: 68 DVDGSRIIVEFARGGPRG 85
DG R+ VEFA G RG
Sbjct: 68 VFDGHRLRVEFAHSGGRG 85
>gi|30678391|ref|NP_850933.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|30678398|ref|NP_563665.3| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|3929368|sp|O22315.1|SFRS1_ARATH RecName: Full=Pre-mRNA-splicing factor SF2; AltName: Full=SR1
protein
gi|6056417|gb|AAF02881.1|AC009525_15 alternative splicing factor SF2a [Arabidopsis thaliana]
gi|2443472|gb|AAB71385.1| ASF/SF2 homolog [Arabidopsis thaliana]
gi|21554051|gb|AAM63132.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|26451794|dbj|BAC42991.1| putative ribonucleoprotein SF-2 [Arabidopsis thaliana]
gi|332189356|gb|AEE27477.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|332189358|gb|AEE27479.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 303
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++FS+YG + +D+K +AFVEF D RDA+DA + +G
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
D DG R+ VE A GG
Sbjct: 69 DFDGHRLRVELAHGG 83
>gi|324504146|gb|ADY41791.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 215
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD----FAFVEFSDPRDADDARYSLNG 66
+R+YVG L + R++D+E+IF+++G++ VD+K FAFVEF DPRDA+DA S +G
Sbjct: 5 SRIYVGNLPTSVRTKDIEDIFTKFGKVLFVDLKDKRPPYFAFVEFEDPRDAEDAVRSRDG 64
Query: 67 RDVDGSRIIVEF 78
D G R+ VEF
Sbjct: 65 YDFYGYRLRVEF 76
>gi|5815235|gb|AAD52609.1|AF173640_1 splicing factor SR1 [Arabidopsis thaliana]
Length = 307
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++FS+YG + +D+K +AFVEF D RDA+DA + +G
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
D DG R+ VE A GG
Sbjct: 69 DFDGHRLRVELAHGG 83
>gi|148228289|ref|NP_001088400.1| serine/arginine-rich splicing factor 9 [Xenopus laevis]
gi|54261635|gb|AAH84289.1| LOC495254 protein [Xenopus laevis]
Length = 230
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR------DFAFVEFSDPRDADDARY 62
G R+YVG L S R ++LE++F RYGRIR V++K FAF+ + DPRDA+DA +
Sbjct: 14 GDGRIYVGNLPSDIREKELEDLFDRYGRIRTVELKNRGGSSAPFAFISYQDPRDAEDAVF 73
Query: 63 SLNGRDVDGSRIIVEF 78
NG D R+ VEF
Sbjct: 74 GRNGYDFGSCRLRVEF 89
>gi|345493962|ref|XP_003427189.1| PREDICTED: RNA-binding protein lark-like [Nasonia vitripennis]
Length = 382
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
T+++VG L T++ + E+F++YG + + D+ R++ FV D +DA LNG+ VD
Sbjct: 40 TKIFVGNLTDNTKAPQVRELFAKYGTVVECDIVRNYGFVHLEATGDVNDAIKELNGQIVD 99
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
G + V+ + R+ G G P +C+ CG GHW+++C G
Sbjct: 100 GQPMKVQIS------TSRVRQRPGMGDPE---QCYRCGRGGHWSKECPKG 140
>gi|302804889|ref|XP_002984196.1| hypothetical protein SELMODRAFT_119951 [Selaginella
moellendorffii]
gi|300148045|gb|EFJ14706.1| hypothetical protein SELMODRAFT_119951 [Selaginella
moellendorffii]
Length = 298
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R +++++F +YGRI D+D+K +AF+EF DPRDA+DA + +G
Sbjct: 8 IYVGNLPGDVRESEIDDLFYKYGRILDIDLKLPPRPPGYAFIEFDDPRDAEDAIKARDGY 67
Query: 68 DVDGSRIIVEFARGGPRG 85
DG R+ VEFA G RG
Sbjct: 68 VFDGHRLRVEFAHSGGRG 85
>gi|52345494|ref|NP_001004795.1| serine/arginine-rich splicing factor 9 [Xenopus (Silurana)
tropicalis]
gi|49257722|gb|AAH74531.1| splicing factor, arginine/serine-rich 9 [Xenopus (Silurana)
tropicalis]
gi|89272901|emb|CAJ83204.1| splicing factor, arginine/serine-rich 9 [Xenopus (Silurana)
tropicalis]
Length = 225
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 7/79 (8%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-------DFAFVEFSDPRDADDAR 61
G R+YVG L + R ++LE++F RYGRIR +++K FAF+ F DPRDA+DA
Sbjct: 14 GDGRIYVGNLPADIREKELEDLFDRYGRIRTIELKNRGGSSAAPFAFISFQDPRDAEDAV 73
Query: 62 YSLNGRDVDGSRIIVEFAR 80
++ NG + R+ VEF R
Sbjct: 74 FARNGYEFGSCRLRVEFPR 92
>gi|166844|gb|AAA32856.1| ribonucleoprotein [Arabidopsis thaliana]
gi|1582992|prf||2119375A Ser/Arg-rich protein
Length = 303
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++FS+YG + +D+K +AFVEF D RDA+DA + +G
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
D DG R+ VE A GG
Sbjct: 69 DFDGHRLRVELAHGG 83
>gi|168043399|ref|XP_001774172.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674440|gb|EDQ60948.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 240
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 17/96 (17%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E+IF +YGRI D+D+K + F+EF D RDA+DA +G
Sbjct: 9 IYVGNLPGDVREREIEDIFYKYGRIVDIDLKLPPRPPGYCFLEFEDARDAEDAIRGRDGY 68
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGR 103
+ DG+R+ VE A G GRGPPP R
Sbjct: 69 NFDGNRLRVEIAHG------------GRGPPPAVDR 92
>gi|355565042|gb|EHH21531.1| hypothetical protein EGK_04623, partial [Macaca mulatta]
Length = 231
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F +YG IRD+D+K FAFVEF D RDA+D Y +G
Sbjct: 47 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDLRDAEDVVYGRDG 106
Query: 67 RDVDGSRIIVEF 78
D G R+ VEF
Sbjct: 107 YDYYGYRLRVEF 118
>gi|339244049|ref|XP_003377950.1| splicing factor, arginine/serine-rich 1 [Trichinella spiralis]
gi|316973185|gb|EFV56805.1| splicing factor, arginine/serine-rich 1 [Trichinella spiralis]
Length = 300
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD----FAFVEFSDPRDADDARYSLNG 66
R+YVG L RSRD+E F R+G++ VD+K FAFVEF D RDA+DA +G
Sbjct: 10 ARIYVGNLPPDIRSRDIESCFERFGKVVAVDLKNRKGPPFAFVEFEDARDAEDAVRYKDG 69
Query: 67 RDVDGSRIIVEFARGGPRGPG 87
++DG ++ VEF RG PG
Sbjct: 70 YELDGYKLRVEFPRGSGVHPG 90
>gi|348532825|ref|XP_003453906.1| PREDICTED: serine/arginine-rich splicing factor 9-like
[Oreochromis niloticus]
Length = 241
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 5/74 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD-----FAFVEFSDPRDADDARYSLNG 66
R+YVG L + RD+E++F +YG+IR++++K + FAFV F DPRDADDA Y NG
Sbjct: 5 RIYVGNLPMDVQERDIEDLFYKYGKIREIELKNNRGTIPFAFVRFEDPRDADDAVYGRNG 64
Query: 67 RDVDGSRIIVEFAR 80
S++ VE+ R
Sbjct: 65 YGYGDSKLRVEYPR 78
>gi|350416927|ref|XP_003491172.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein lark-like
[Bombus impatiens]
Length = 458
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
T+++VG L T++ + E+F++YG + + D+ R++ FV D +DA LNG+ VD
Sbjct: 183 TKIFVGNLTDNTKAPQVRELFAKYGTVVECDIVRNYGFVHLEATGDVNDAIKELNGQMVD 242
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
G + V+ + R+ G G P +C+ CG GHW+++C G
Sbjct: 243 GQPMKVQIS------TSRVRQRPGMGDPE---QCYRCGRGGHWSKECPKG 283
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDA 60
MP + G ++++G LA +T + D++ +F +YG++ + D+ +++ FV + +A
Sbjct: 95 MPGFSS-VGTFKIFIGNLADKTSNADIKPLFEKYGKVVECDVVKNYGFVHMENEEAGRNA 153
Query: 61 RYSLNGRDVDGSRIIVEFA--RGGPRGP 86
+LNG V G I E A R GP P
Sbjct: 154 IQNLNGHIVHGQPIKCEAAKSRKGPNTP 181
>gi|145513594|ref|XP_001442708.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410061|emb|CAK75311.1| unnamed protein product [Paramecium tetraurelia]
Length = 238
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 13/101 (12%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
R+YV + + D++++F ++G+I + K + F+EF DP DA+ A +N +V G
Sbjct: 18 RVYVTGYSLKEDQHDIKKLFKKFGKIEEFAWKGKYCFIEFKDPEDAEKAVKKMNKEEVKG 77
Query: 72 SRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGH 112
S + VE ARG P +G C++CG GH
Sbjct: 78 SVLQVEMARGNK-------------PSKNNGLCYSCGHSGH 105
>gi|448878168|gb|AGE46047.1| arginine/serine-rich splicing factor RS2Z39 transcript V [Zea
mays]
Length = 54
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 34/37 (91%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRI 37
MPRYDDRYGGTRLYVGRLA+RTRSRDLE +F RYGR
Sbjct: 1 MPRYDDRYGGTRLYVGRLATRTRSRDLEHLFGRYGRF 37
>gi|389611835|dbj|BAM19479.1| RNA binding motif protein 4,lark [Papilio xuthus]
Length = 296
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 9/107 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
T+++VG L +TR+ ++ E+F ++G + + D+ R++ FV D ++A LNG VD
Sbjct: 40 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNEAIXELNGMMVD 99
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
G + V+ + R+ G G P +C+ CG GHW+++C
Sbjct: 100 GQPMKVQLS------TSRVRQRPGMGDPE---QCYRCGRGGHWSKEC 137
>gi|413950155|gb|AFW82804.1| hypothetical protein ZEAMMB73_743489, partial [Zea mays]
Length = 70
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/36 (88%), Positives = 34/36 (94%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGR 36
MPRYDDRYGGTRLYVGRLA+RTRSRDLE +F RYGR
Sbjct: 34 MPRYDDRYGGTRLYVGRLATRTRSRDLEHLFGRYGR 69
>gi|221117454|ref|XP_002167286.1| PREDICTED: uncharacterized protein LOC100197032 [Hydra
magnipapillata]
Length = 394
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 48/71 (67%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+Y+G+L R RD+++ FS++G +R++ MK ++ F+++ R+A+DA Y ++ R
Sbjct: 25 GARIYIGKLPGDIRERDIDKAFSKFGHVREIAMKGNYCFLQYEKTREAEDAVYEMHDRSF 84
Query: 70 DGSRIIVEFAR 80
G RI VE AR
Sbjct: 85 FGERIQVEHAR 95
>gi|390604021|gb|EIN13412.1| hypothetical protein PUNSTDRAFT_139962 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 521
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
++Y+G L TR DL+ F + G I ++++K + FVEF A+++ N G
Sbjct: 84 KVYIGGLPEHTRREDLQSCFGKIGNIVNIELKVGYGFVEFETREAAEESVAKYNEGYFMG 143
Query: 72 SRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
++I VE + G G + +Y G CF CG GHWAR+C
Sbjct: 144 NKIRVEISHG-----GRTAKYQSE-----PGACFKCGQLGHWAREC 179
>gi|221128969|ref|XP_002161622.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Hydra
magnipapillata]
Length = 277
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+ L+VG L R RDLE F RYG+I D+K++F F++F D RDA+ A N R +
Sbjct: 3 SELFVGNLNPEVRVRDLENCFGRYGKIVRCDLKKNFGFIQFEDRRDAEIAIQKENNRRLL 62
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPP 99
GS + VE+ARG + G GPPP
Sbjct: 63 GSDMTVEWARGTV-----GDKMRGNGPPP 86
>gi|198434018|ref|XP_002131881.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 5 [Ciona intestinalis]
Length = 273
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 62/120 (51%), Gaps = 14/120 (11%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGRD 68
++YVG L + DLEE FS YGR+ V + R+ FA+V F D RDA DA L+G+
Sbjct: 13 KVYVGNLGTHASREDLEEEFSYYGRLDSVWVARNPPGFAYVLFEDARDAKDAVRGLDGKI 72
Query: 69 VDGSRIIVEFA------RGGPRGPGGSREYLGRGPPPGSG-----RCFNCGIDGHWARDC 117
+ ++ V+ + R RGP Y G G G RC+NC GH+ARDC
Sbjct: 73 ICDRKVRVDISNSRSTGRPARRGPAPYDRYGGGGGGGNRGFRSDMRCYNCSETGHFARDC 132
>gi|340371197|ref|XP_003384132.1| PREDICTED: serine/arginine-rich splicing factor 1-like
[Amphimedon queenslandica]
Length = 242
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDM----KRDFAFVEFSDPRDADDARYSLNGR 67
++YVG L R RDLE+IF +YG++ DVD+ + FAF+EF DPRDADDA +G
Sbjct: 10 KVYVGNLPGDIRKRDLEDIFYKYGKLVDVDLHDRRETPFAFIEFEDPRDADDAIRGRDGY 69
Query: 68 DVDGSRIIVEFARGGP 83
DG ++ VE R P
Sbjct: 70 MFDGYKLRVELPRSSP 85
>gi|225450797|ref|XP_002283865.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Vitis vinifera]
Length = 288
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YG I D+D+K +AFVEF D RDA+DA Y +G
Sbjct: 9 VYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIYGRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
+ DG R+ VE A GG
Sbjct: 69 NFDGHRLRVELAHGG 83
>gi|145500822|ref|XP_001436394.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403533|emb|CAK68997.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 15/96 (15%)
Query: 25 RDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGSRI---IVEFARG 81
+ +++IF +YG I+DV K ++FV FS +A +A +LNG+ ++G ++ IV+ +G
Sbjct: 23 KGIKDIFKKYGSIKDVAYKGSYSFVTFSAESEAQNAISALNGQQINGQKLKVDIVDNHKG 82
Query: 82 GPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
GP E CF CG GHWAR+C
Sbjct: 83 RRSGPQEKDE------------CFKCGQGGHWAREC 106
>gi|5815239|gb|AAD52613.1| splicing factor SR1E [Arabidopsis thaliana]
Length = 270
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++FS+YG + +D+K +AFVEF D RDA+DA + +G
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
D DG R+ VE A GG
Sbjct: 69 DFDGHRLRVELAHGG 83
>gi|226472060|emb|CAX77068.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472062|emb|CAX77069.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472064|emb|CAX77070.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472066|emb|CAX77071.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472072|emb|CAX77074.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
Length = 155
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNG 66
GT++Y+G L R+LE IF YGR+R+V + R+ FAFVEF D DA DA L+G
Sbjct: 9 GTKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELDG 68
Query: 67 RDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGID-GHWARDCKAGDWKNK 125
+ G R VE + G R + P G G D G +R K D ++
Sbjct: 69 TVMCGVRARVELSTGKSR----------QKPWVRGGARNGGGRDNGPGSRRMKPFDPADR 118
Query: 126 CYRCGERGHIERNC 139
CY CGERGH +C
Sbjct: 119 CYECGERGHYAYDC 132
>gi|448878162|gb|AGE46044.1| arginine/serine-rich splicing factor RS2Z39 transcript II [Zea
mays]
Length = 36
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/36 (88%), Positives = 34/36 (94%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGR 36
MPRYDDRYGGTRLYVGRLA+RTRSRDLE +F RYGR
Sbjct: 1 MPRYDDRYGGTRLYVGRLATRTRSRDLEHLFGRYGR 36
>gi|170046272|ref|XP_001850696.1| RNA binding motif protein 4,lark [Culex quinquefasciatus]
gi|167869088|gb|EDS32471.1| RNA binding motif protein 4,lark [Culex quinquefasciatus]
Length = 332
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 15/110 (13%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
T+++VG L TR+ + E+F +YG + + D+ R++ FV D ++A LNG VD
Sbjct: 86 TKIFVGNLTDVTRAPQVRELFQKYGTVVECDIVRNYGFVHLDPQGDVNEAIRELNGMMVD 145
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSG---RCFNCGIDGHWARDC 117
G + V+ + R P PG G +C+ CG GHW+++C
Sbjct: 146 GQPMKVQVSTSRVR------------PKPGMGDPEQCYRCGRSGHWSKEC 183
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
+L++G + +T+ DL +F +YG + + D+ +++ FV DA +L+G V+G
Sbjct: 8 KLFIGNVDEKTQPSDLRPLFEKYGTVVECDVVKNYGFVHMETEDMGRDAIQNLDGYVVNG 67
Query: 72 SRIIVEFAR 80
I VE AR
Sbjct: 68 KAIKVEAAR 76
>gi|2443473|gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana]
Length = 272
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++FS+YG + +D+K +AFVEF D RDA+DA + +G
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 68 DVDGSRIIVEFARGGPR 84
D DG R+ VE A GG R
Sbjct: 69 DFDGHRLRVELAHGGRR 85
>gi|209738068|gb|ACI69903.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 158
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR--DFAFVEFSDPRDADDARYSLNGRD 68
++YVG + + DLE FS+YG +R V + R F FVE++D RDA+DA ++G+
Sbjct: 16 CKVYVGDIVNGATMCDLEREFSQYGPLRSVWVARPPVFGFVEYADARDAEDAVKGMDGKV 75
Query: 69 VDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCK 118
V GSRI VE AR ++ GRC CG GH+A +C+
Sbjct: 76 VWGSRIHVELAR------KAKHDHPSNHHIDPQGRCNQCGNRGHYAYNCE 119
>gi|5815237|gb|AAD52611.1| splicing factor SR1C [Arabidopsis thaliana]
Length = 276
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++FS+YG + +D+K +AFVEF D RDA+DA + +G
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 68 DVDGSRIIVEFARGGPR 84
D DG R+ VE A GG R
Sbjct: 69 DFDGHRLRVELAHGGRR 85
>gi|5815236|gb|AAD52610.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 289
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++FS+YG + +D+K +AFVEF D RDA+DA + +G
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 68 DVDGSRIIVEFARGGPR 84
D DG R+ VE A GG R
Sbjct: 69 DFDGHRLRVELAHGGRR 85
>gi|30678395|ref|NP_850934.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|22135918|gb|AAM91541.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|30023782|gb|AAP13424.1| At1g02840 [Arabidopsis thaliana]
gi|332189357|gb|AEE27478.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 285
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++FS+YG + +D+K +AFVEF D RDA+DA + +G
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 68 DVDGSRIIVEFARGGPR 84
D DG R+ VE A GG R
Sbjct: 69 DFDGHRLRVELAHGGRR 85
>gi|296089689|emb|CBI39508.3| unnamed protein product [Vitis vinifera]
Length = 249
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YG I D+D+K +AFVEF D RDA+DA Y +G
Sbjct: 9 VYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIYGRDGY 68
Query: 68 DVDGSRIIVEFARGG 82
+ DG R+ VE A GG
Sbjct: 69 NFDGHRLRVELAHGG 83
>gi|145515315|ref|XP_001443557.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410946|emb|CAK76160.1| unnamed protein product [Paramecium tetraurelia]
Length = 186
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 15/102 (14%)
Query: 22 TRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA-- 79
T RD+ EIF +YG +++V K ++F+ FS+ +A +A +NG +G ++ V+
Sbjct: 20 TDERDVREIFRKYGSLKEVAYKGSYSFITFSNEDEAKEALTEMNGTTHNGQKLKVDVVDN 79
Query: 80 -RGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
+G GP S E CF CG GHWARDC G
Sbjct: 80 RKGRRTGPNESDE------------CFKCGRGGHWARDCPKG 109
>gi|291230091|ref|XP_002735001.1| PREDICTED: RNA-binding protein, putative-like [Saccoglossus
kowalevskii]
Length = 227
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 10/111 (9%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
+R++VG L R++E+ F++YG++ +V + R+ FAFV F DA++A + ++GR
Sbjct: 44 SRVHVGDLGIDCSRREIEKAFAKYGKLYEVWVARNPPCFAFVVFKRSSDAEEAVHDMDGR 103
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCK 118
+ G R+ V AR PR G R RG P RC+ CG GH++RDC+
Sbjct: 104 MLCGGRVRVSLAR--PRTQGRGR----RGYDPNL-RCYQCGERGHFSRDCR 147
>gi|5815238|gb|AAD52612.1| splicing factor SR1D [Arabidopsis thaliana]
Length = 261
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++FS+YG + +D+K +AFVEF D RDA+DA + +G
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68
Query: 68 DVDGSRIIVEFARGGPR 84
D DG R+ VE A GG R
Sbjct: 69 DFDGHRLRVELAHGGRR 85
>gi|294653211|gb|ADF28513.1| rbp1-like RNA-binding protein PB [Pelinobius muticus]
Length = 134
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDA 57
M ++ D ++Y+G L SR D+E +FSRYG IR+V + R+ FAFVEF D RDA
Sbjct: 1 MTQFRDWNLECKVYIGNLGSRATKDDIEAVFSRYGPIRNVWVARNPPGFAFVEFEDSRDA 60
Query: 58 DDARYSLNGRDVDGSRIIVEFA 79
+DA +L+G + G+R+ VE +
Sbjct: 61 EDAVKALDGTRICGARVRVEMS 82
>gi|170087376|ref|XP_001874911.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650111|gb|EDR14352.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 297
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
RLY+GRL + RS D+ + F YGRI D + F FVEF + +DA+DA ++ NG+ G
Sbjct: 4 RLYLGRLPTDARSDDVSKFFDGYGRIIDCRVMTGFGFVEFENAKDAEDAVHNFNGKPFMG 63
Query: 72 SRIIVEFAR 80
I+VEFA+
Sbjct: 64 VNIVVEFAK 72
>gi|321469591|gb|EFX80571.1| hypothetical protein DAPPUDRAFT_304081 [Daphnia pulex]
Length = 162
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGRD 68
++YVG L S ++EE FS+YG +R+V + R+ FAFVEF DPRDA+DA +L+G
Sbjct: 13 KVYVGNLGSNAARGEIEEAFSKYGTLRNVWVARNPPGFAFVEFEDPRDAEDAVRALDGVR 72
Query: 69 VDGSRIIVEFARGGPRGPG 87
+ G+R+ VE + G R G
Sbjct: 73 LCGARVKVEMSTGKRRSNG 91
>gi|392567011|gb|EIW60186.1| hypothetical protein TRAVEDRAFT_27854 [Trametes versicolor
FP-101664 SS1]
Length = 288
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
RLY+GRL RS ++ + F YGRI D + F FVEF RDA+DA + NG++ G
Sbjct: 4 RLYLGRLPPDVRSEEVSKFFDGYGRIVDCRVMTGFGFVEFESSRDAEDAMQNFNGKNFMG 63
Query: 72 SRIIVEFAR 80
S I+VEFA+
Sbjct: 64 SNIVVEFAK 72
>gi|324512727|gb|ADY45260.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 242
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD----FAFVEFSDPRDADDARYSLNGR 67
R+YVG L S + RDLE++F +YGRI +D+K FAF+EF D RDA+DA +G
Sbjct: 8 RVYVGNLPSNVKQRDLEDLFDKYGRICFIDVKYSRGAPFAFLEFEDSRDAEDAIRGRDGY 67
Query: 68 DVDGSRIIVEFA 79
D+DG RI VE
Sbjct: 68 DLDGCRIRVEMT 79
>gi|443725387|gb|ELU13010.1| hypothetical protein CAPTEDRAFT_155910 [Capitella teleta]
Length = 268
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 66/138 (47%), Gaps = 31/138 (22%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
T++YVG L + ++LE FS YG ++ V + R+ FAFVEF DPRDADD+ L+G
Sbjct: 30 TKVYVGDLPRDAQEKELERAFSYYGPLKSVWVARNPPGFAFVEFEDPRDADDSVRGLDGS 89
Query: 68 DVDGSRIIVEFARGGPR----------------------------GPGGSREYLGRGPPP 99
+ G+R+ VE + G R G GG R P
Sbjct: 90 SLCGTRVRVELSTGKVRPKPWMRRGPPGRDGGRDGDRGRDGGRDGGRGGGDRDRSRRPFD 149
Query: 100 GSGRCFNCGIDGHWARDC 117
+ RCF CG GH+A DC
Sbjct: 150 PADRCFECGGRGHYAYDC 167
>gi|221130501|ref|XP_002159641.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Hydra
magnipapillata]
Length = 265
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
R+YVG L ++RD+E++F +YG I+ +D+ FAF+EF DPRDA DA Y +G
Sbjct: 13 RVYVGNLPQFVKNRDIEDLFDKYGPIKAIDIHNRFDPAFAFLEFEDPRDASDAVYGKDGE 72
Query: 68 DVDGSRIIVEFARGGPRG 85
+G RI V+F R G
Sbjct: 73 RFEGQRIRVQFPRNSAAG 90
>gi|168009612|ref|XP_001757499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691193|gb|EDQ77556.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 17/96 (17%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++F +YGRI D+D+K + F+EF D RDA+DA +G
Sbjct: 9 IYVGNLPGDVREREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDGRDAEDAIRGRDGY 68
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGR 103
+ DG+R+ VE A G GRGPPP R
Sbjct: 69 NFDGNRLRVEIAHG------------GRGPPPAVDR 92
>gi|297693630|ref|XP_002824116.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Pongo
abelii]
Length = 221
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L + R +DLE++F +YGRIR++++K FAFV DPRDA+DA Y NG
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREMELKNRHGLVPFAFVRLEDPRDAEDAIYGRNGY 75
Query: 68 DVDGSRIIVEFAR 80
D R+ VEF R
Sbjct: 76 DYGQCRLRVEFPR 88
>gi|357621997|gb|EHJ73625.1| RNA-binding protein lark [Danaus plexippus]
Length = 341
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 9/107 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
T+++VG L +TR+ ++ E+F ++G + + D+ R++ FV D ++A LNG VD
Sbjct: 86 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDASGDVNEAIKELNGMMVD 145
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
G + V+ + R+ G G P +C+ CG GHW+++C
Sbjct: 146 GQPMKVQLS------TSRVRQRPGMGDPE---QCYRCGRGGHWSKEC 183
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRD 68
G +++VG L+ +T DL +F ++G + + D+ R++ FV + + +A +LNG
Sbjct: 5 GTFKIFVGNLSDKTTDADLRPLFEKFGTVVECDIVRNYGFVHMENEQVGREAIQNLNGEV 64
Query: 69 VDGSRIIVEFAR 80
V G I +E A+
Sbjct: 65 VHGQAIKIEAAK 76
>gi|91088839|ref|XP_970745.1| PREDICTED: similar to lark CG8597-PA [Tribolium castaneum]
gi|270012337|gb|EFA08785.1| hypothetical protein TcasGA2_TC006476 [Tribolium castaneum]
Length = 358
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
T+++VG L T++ + E+F +YG + + D+ R++ FV D ++A LNG VD
Sbjct: 89 TKIFVGNLTDNTKAPQIRELFKKYGTVVECDIVRNYGFVHLESSGDVNEAIKELNGTLVD 148
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
G + V+ + R+ G G P +C+ CG GHW+++C G
Sbjct: 149 GQPMKVQVS------TSRVRQRPGMGDPE---QCYRCGRGGHWSKECPKG 189
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 42/72 (58%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRD 68
G ++++G LA +T DL +F +YG++ + D+ +++ FV + + +A +LNG
Sbjct: 8 GTFKIFIGNLAEKTAVTDLRPLFEKYGKVVECDVVKNYGFVHMENESEGREAIQNLNGHM 67
Query: 69 VDGSRIIVEFAR 80
++G + E A+
Sbjct: 68 LNGQPMKCEAAK 79
>gi|354484028|ref|XP_003504193.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Cricetulus
griseus]
gi|344255990|gb|EGW12094.1| Splicing factor, arginine/serine-rich 3 [Cricetulus griseus]
Length = 164
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 10 CKVYVGNLGNNGNKTELEHAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 102
+ G R+ VE + G R SR RGPPP G
Sbjct: 70 TLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|170054825|ref|XP_001863306.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874993|gb|EDS38376.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 246
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 67/122 (54%), Gaps = 15/122 (12%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +++E+ FS YG +R+V + R+ FAFVEF D RDA+D+ L+GR
Sbjct: 8 AKVYVGELGNNASKQEIEDAFSYYGPLRNVWVARNPPGFAFVEFEDARDAEDSVRGLDGR 67
Query: 68 DVDGSRIIVEFA----RGGPRGPGGSREYLGRGPPPGSG--------RCFNCGIDGHWAR 115
+ G R VE + G RG GRG PP S RC+ CG GH+AR
Sbjct: 68 TICGRRARVELSTGKGGRGLRGGDRGGGDRGRGGPPSSKSGRFHPDDRCYECGGRGHYAR 127
Query: 116 DC 117
DC
Sbjct: 128 DC 129
>gi|403183501|gb|EJY58142.1| AAEL017030-PA [Aedes aegypti]
Length = 193
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 9/85 (10%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNG 66
GTR+YVG L + + DLE F++YG++ V + + FAF+EF + +A+ A +LNG
Sbjct: 6 GTRVYVGNLTDKVKKEDLEGEFTKYGKLNSVWVAFNPPGFAFIEFENKEEAESACDNLNG 65
Query: 67 RDVDGSRIIVEFA------RGGPRG 85
+D+ GS++ VE + RGGPRG
Sbjct: 66 QDILGSKLRVEISKGRRNPRGGPRG 90
>gi|195996923|ref|XP_002108330.1| hypothetical protein TRIADDRAFT_49822 [Trichoplax adhaerens]
gi|190589106|gb|EDV29128.1| hypothetical protein TRIADDRAFT_49822 [Trichoplax adhaerens]
Length = 223
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 5/76 (6%)
Query: 7 RYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD-----FAFVEFSDPRDADDAR 61
RY R+Y+G L S R RDLE++F +YG+I + +K + FAFVEF D RDA+DA
Sbjct: 3 RYNECRIYIGNLPSDIRERDLEDLFYKYGKILSISLKDNRRGPPFAFVEFEDKRDAEDAI 62
Query: 62 YSLNGRDVDGSRIIVE 77
+G D DG R+ VE
Sbjct: 63 DGRDGYDFDGCRLRVE 78
>gi|432885940|ref|XP_004074826.1| PREDICTED: serine/arginine-rich splicing factor 9-like isoform 1
[Oryzias latipes]
Length = 117
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 9/82 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD-----FAFVEFSDPRDADDARYSLNG 66
R+Y+G L + RD+E++F +YG+IR++++K + FAF+ F DPRDADDA Y NG
Sbjct: 5 RIYIGNLPIDVQERDIEDLFFKYGKIREIELKNNRGTIPFAFIRFEDPRDADDAVYGRNG 64
Query: 67 RDVDGSRIIVEFARGGPRGPGG 88
S++ VE+ PR GG
Sbjct: 65 YVYGNSKLRVEY----PRSTGG 82
>gi|348688828|gb|EGZ28642.1| hypothetical protein PHYSODRAFT_353568 [Phytophthora sojae]
Length = 173
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNG 66
GTR+YVG L SR++++ F+RYG + ++ + R+ FAFV+F DPRDADDA S++G
Sbjct: 2 GTRVYVGGLPRDATSREIQDGFNRYGHVSNIWVARNPPGFAFVDFEDPRDADDAIRSMDG 61
Query: 67 RDVDGSRIIVEFA 79
RD G RI VE A
Sbjct: 62 RDFLGGRIRVELA 74
>gi|145552234|ref|XP_001461793.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429629|emb|CAK94420.1| unnamed protein product [Paramecium tetraurelia]
Length = 186
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 15/99 (15%)
Query: 25 RDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA---RG 81
+D+ EIF +YG +++V K ++F+ FS+ +A +A +NG +G ++ V+ +G
Sbjct: 23 KDVREIFRKYGSVKEVAYKGSYSFITFSNEDEAKEALTEMNGATYNGQKLKVDVVDNRKG 82
Query: 82 GPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
GP S E CF CG GHWARDC G
Sbjct: 83 RRNGPNESDE------------CFKCGKGGHWARDCPKG 109
>gi|307219223|ref|NP_001182527.1| splicing factor, arginine/serine-rich 13B [Sus scrofa]
Length = 261
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 9/95 (9%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDF--------AFVEFS 52
M RY R T L+V +A TR DL F RYG I DV + DF A+V+F
Sbjct: 1 MSRYT-RPPNTSLFVRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFE 59
Query: 53 DPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPG 87
D RDA+DA Y+LN + V G +I ++FA+G + PG
Sbjct: 60 DVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPG 94
>gi|145518856|ref|XP_001445300.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412744|emb|CAK77903.1| unnamed protein product [Paramecium tetraurelia]
Length = 454
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 27 LEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA--RGGPR 84
+++IF +YG I+DV K ++FV F +A+DA +LNG+ ++G ++ V+ R G
Sbjct: 25 IKDIFKKYGNIKDVAYKGSYSFVTFQSESEAEDALKALNGQTINGQKLKVDVVDNRKGR- 83
Query: 85 GPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
R P + CF CG GHWAR+C
Sbjct: 84 ----------RSGPQENDECFKCGKGGHWAREC 106
>gi|432099499|gb|ELK28647.1| Heterogeneous nuclear ribonucleoprotein G-like 1 [Myotis davidii]
Length = 535
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 178 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 237
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 238 MNGKSLDGKAIKVEQA 253
>gi|145525018|ref|XP_001448331.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415875|emb|CAK80934.1| unnamed protein product [Paramecium tetraurelia]
Length = 161
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 16/108 (14%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
R+YV +++ D++ F+R+G I++ K F F+ ++ P DA +A +N +++
Sbjct: 13 ANRIYVTGYSAKESEMDIKSAFARHGEIQEFSWKGRFCFIAYTKPEDAANAVRLMNQQEI 72
Query: 70 DGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
+G +IVE AR + G C+ CG GH+AR+C
Sbjct: 73 NGRNLIVELARAKKK----------------DGACYQCGKQGHFARNC 104
>gi|390597697|gb|EIN07096.1| hypothetical protein PUNSTDRAFT_71302 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 282
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 43/69 (62%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
RLY+GRL TRS D+ + F YG I D + F FVEF RDA+DA NG+ +G
Sbjct: 5 RLYLGRLPPDTRSEDVSKFFDGYGHIVDCRVMTGFGFVEFESTRDAEDALNHFNGKPFNG 64
Query: 72 SRIIVEFAR 80
+ I++EFA+
Sbjct: 65 ANIVIEFAK 73
>gi|334327169|ref|XP_003340840.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 9-like [Monodelphis domestica]
Length = 220
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
R+YV L + R +DLE++F +YGRIRD+++K FAFV F DPRDA+DA Y NG
Sbjct: 17 RIYVENLPADVREKDLEDLFYKYGRIRDIELKNRRGLAPFAFVRFEDPRDAEDAIYGRNG 76
Query: 67 RDVDGSRIIVEF 78
D R+ VE
Sbjct: 77 YDYGQCRLRVEL 88
>gi|145506761|ref|XP_001439341.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406525|emb|CAK71944.1| unnamed protein product [Paramecium tetraurelia]
Length = 158
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 16/109 (14%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
R+YV +++ +++ F+R+G I++ K F F+ ++ P DA DA +N +D
Sbjct: 13 ANRIYVTGYSAKESEMEIKNAFARHGEIQEFSWKGRFCFIAYAKPEDASDAVRLMNMQDF 72
Query: 70 DGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCK 118
+G +IVE AR + G C+ CG GH+AR+C+
Sbjct: 73 NGRNLIVELARAKKK----------------DGACYQCGKQGHFARNCR 105
>gi|225711580|gb|ACO11636.1| Splicing factor, arginine/serine-rich 7 [Caligus rogercresseyi]
Length = 332
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 77/166 (46%), Gaps = 39/166 (23%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNG 66
G R++V L RD+E++F ++G ++++ M R FAF F DA+DA + +G
Sbjct: 189 GYRIHVADLDVSASKRDMEKVFGKFGPLKEIWMARSVPCFAFCVFRYREDAEDAVRTSDG 248
Query: 67 RDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKC 126
+V G RI V AR PR G R R FN + +C
Sbjct: 249 TEVSGRRIRVTHAR--PRTKGRGR------------RGFNPNM---------------RC 279
Query: 127 YRCGERGHIERNCQNSPKKLRPRSYSRSPSPRRGR--SRSRSYSRG 170
Y+CG+RGH R+C ++ Y R PSPR GR R Y RG
Sbjct: 280 YQCGDRGHFSRDCPDTKY-----GYKRPPSPRYGRRGDSDRHYDRG 320
>gi|297843082|ref|XP_002889422.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
gi|297335264|gb|EFH65681.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R R++E++FS+YG + +D+K +AFVEF D RDA+DA +G
Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIQGRDGY 68
Query: 68 DVDGSRIIVEFARGGPR 84
D DG R+ VE A GG R
Sbjct: 69 DFDGHRLRVELAHGGRR 85
>gi|21358097|ref|NP_652611.1| SF2, isoform A [Drosophila melanogaster]
gi|386765902|ref|NP_001247139.1| SF2, isoform B [Drosophila melanogaster]
gi|194901262|ref|XP_001980171.1| GG20059 [Drosophila erecta]
gi|195349404|ref|XP_002041235.1| GM15444 [Drosophila sechellia]
gi|7243684|gb|AAF43413.1|AF232773_1 SR family splicing factor SF2 [Drosophila melanogaster]
gi|7331146|gb|AAF60294.1|AF234157_1 SR family splicing factor [Drosophila melanogaster]
gi|7300132|gb|AAF55300.1| SF2, isoform A [Drosophila melanogaster]
gi|15292149|gb|AAK93343.1| LD40489p [Drosophila melanogaster]
gi|190651874|gb|EDV49129.1| GG20059 [Drosophila erecta]
gi|194122840|gb|EDW44883.1| GM15444 [Drosophila sechellia]
gi|220946268|gb|ACL85677.1| SF2-PA [synthetic construct]
gi|220955952|gb|ACL90519.1| SF2-PA [synthetic construct]
gi|383292748|gb|AFH06457.1| SF2, isoform B [Drosophila melanogaster]
Length = 255
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
R+YVG L R++D++++F ++G++ VD+K FAFVEF D RDADDA + +G
Sbjct: 8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 67
Query: 68 DVDGSRIIVEFAR 80
D DG R+ VEF R
Sbjct: 68 DYDGYRLRVEFPR 80
>gi|195501014|ref|XP_002097620.1| GE26323 [Drosophila yakuba]
gi|194183721|gb|EDW97332.1| GE26323 [Drosophila yakuba]
Length = 254
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
R+YVG L R++D++++F ++G++ VD+K FAFVEF D RDADDA + +G
Sbjct: 8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 67
Query: 68 DVDGSRIIVEFAR 80
D DG R+ VEF R
Sbjct: 68 DYDGYRLRVEFPR 80
>gi|208973274|ref|NP_001129183.1| 35 kDa SR repressor protein [Rattus norvegicus]
Length = 261
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 9/95 (9%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDF--------AFVEFS 52
M RY R T L+V +A TR DL F RYG I DV + DF A+V+F
Sbjct: 1 MSRYT-RPPNTSLFVRNVADATRPEDLRREFGRYGPIVDVYIPLDFYSRRPRGFAYVQFE 59
Query: 53 DPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPG 87
D RDA+DA Y+LN + V G +I ++FA+G + PG
Sbjct: 60 DVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPG 94
>gi|308459677|ref|XP_003092154.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
gi|308254084|gb|EFO98036.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
Length = 336
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 136/307 (44%), Gaps = 36/307 (11%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMK---RD---FAFVEFSDPRDADDARYSLNG 66
+YVG L S R +++E+IF +YG IR++D+K RD FAF++F D RDA +A + +G
Sbjct: 6 VYVGNLPSDVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRACDG 65
Query: 67 RDVDGSRIIVEFARGGPRGP--------GGSREYLGRGPPPGSG-RCFNCGI--DGHWAR 115
+ DG R+ VEF RG GSR GPP S R G+ G W
Sbjct: 66 YEFDGKRLRVEFPRGKGPRGPGGRPTRDNGSRFGRNGGPPKRSNYRLIVEGLPRSGSWQ- 124
Query: 116 DCKAGDWKNKCYRCGERGHIERNCQNSPKKLRPRSYSRSPSPRRGRSRSRSYSRGRSDSR 175
D K+ + GE + N N + Y R ++ S +
Sbjct: 125 -----DIKDHLKQAGEICYA--NVHNGEGVVEFERYENLEYAIRKYDDTKFRSHKGETAY 177
Query: 176 SRSPVKRDRSVERFERRTRSPRDSRSPKRRRNSPPSSKGRKRSPTPDERSPQDQRSPSPR 235
R + + +RRTRS S+SP R R S SS+ + S RS SP
Sbjct: 178 IRLKEDKSEYAKENKRRTRSISRSKSPNRGRCSRSSSRSKSSIRGRRTGSASKSRSRSPV 237
Query: 236 DRRQANGSEYSGSPR---GKSRSPV-------DDADGPEDRNYRSPPEENGRSRSRSLSP 285
R+ + SE SGSP +SRSP+ ++ P R RS +SR RS+S
Sbjct: 238 SRQHRDRSE-SGSPARRVSRSRSPISRQRRARSESGTPARRATRSRSPVKRQSRDRSVSS 296
Query: 286 VPRDDRS 292
V R RS
Sbjct: 297 VGRASRS 303
>gi|195451089|ref|XP_002072763.1| GK13511 [Drosophila willistoni]
gi|194168848|gb|EDW83749.1| GK13511 [Drosophila willistoni]
Length = 263
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
R+YVG L R++D++++F ++G++ VD+K FAFVEF D RDADDA + +G
Sbjct: 8 RIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGY 67
Query: 68 DVDGSRIIVEFAR 80
D DG R+ VEF R
Sbjct: 68 DYDGYRLRVEFPR 80
>gi|442626458|ref|NP_001260168.1| x16, isoform B [Drosophila melanogaster]
gi|440213469|gb|AGB92704.1| x16, isoform B [Drosophila melanogaster]
Length = 257
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGRD 68
++YVG L + R DLE +F YG +R V + R+ FAFVEF RDA DA L+GR
Sbjct: 9 KVYVGDLGNNARKNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGRT 68
Query: 69 VDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYR 128
V G R VE + G +Y G G G G G +KCY
Sbjct: 69 VCGRRARVELSTG---------KYARSGGGGGGGGGGGGGGGLGGRDRGGGGRGDDKCYE 119
Query: 129 CGERGHIERNCQ 140
CG RGH R+C+
Sbjct: 120 CGGRGHFARHCR 131
>gi|410919787|ref|XP_003973365.1| PREDICTED: uncharacterized protein LOC101077437 [Takifugu
rubripes]
Length = 1490
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 52/91 (57%), Gaps = 10/91 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGRD 68
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 14 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDASDAVRELDGRT 73
Query: 69 VDGSRIIVEFARGGPRGPGGSREYLGRGPPP 99
+ G R+ VE + G R SR RGPPP
Sbjct: 74 MCGCRVRVELSTGEKR----SR---SRGPPP 97
>gi|348515473|ref|XP_003445264.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Oreochromis niloticus]
Length = 391
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 14/89 (15%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE+ FS+YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETTEKALEQYFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 64 LNGRDVDGSRIIVE------FARGGPRGP 86
+NG+ +DG I VE F G RGP
Sbjct: 69 MNGKSLDGKPIKVEQATKPQFESAGRRGP 97
>gi|172046470|emb|CAQ34907.1| ASF/SF2 protein [Chironomus tentans]
Length = 246
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNG 66
R+YVG L R++D+E++F R+G++ VD+K F FVEF D RDA DA + +
Sbjct: 9 NRIYVGNLPPDIRTKDVEDLFFRFGKVSFVDLKNRRGPPFVFVEFEDHRDASDAVKARSN 68
Query: 67 RDVDGSRIIVEFARGGPRGPGGS 89
D DG ++ VEF RGG GPG S
Sbjct: 69 YDYDGYKLRVEFPRGG--GPGSS 89
>gi|384948768|gb|AFI37989.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
Length = 164
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 102
+ G R+ VE + G R SR RGPPP G
Sbjct: 70 TLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|108744011|gb|ABG02278.1| heterogeneous nuclear ribonucleoprotein G [Haplochromis burtoni]
Length = 391
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 14/89 (15%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE+ FS+YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETTEKALEQYFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 64 LNGRDVDGSRIIVE------FARGGPRGP 86
+NG+ +DG I VE F G RGP
Sbjct: 69 MNGKSLDGKPIKVEQATKPQFESAGRRGP 97
>gi|24582360|ref|NP_723226.1| x16, isoform A [Drosophila melanogaster]
gi|7243686|gb|AAF43414.1|AF232774_1 SR family splicing factor 9G8 [Drosophila melanogaster]
gi|6433840|emb|CAB60724.1| DXl6 protein [Drosophila melanogaster]
gi|7297188|gb|AAF52454.1| x16, isoform A [Drosophila melanogaster]
gi|20152051|gb|AAM11385.1| LD46359p [Drosophila melanogaster]
gi|220946366|gb|ACL85726.1| xl6-PA [synthetic construct]
gi|220956098|gb|ACL90592.1| xl6-PA [synthetic construct]
Length = 258
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGRD 68
++YVG L + R DLE +F YG +R V + R+ FAFVEF RDA DA L+GR
Sbjct: 9 KVYVGDLGNNARKNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGRT 68
Query: 69 VDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYR 128
V G R VE + G +Y G G G G G +KCY
Sbjct: 69 VCGRRARVELSTG---------KYARSGGGGGGGGGGGGGGGLGGRDRGGGGRGDDKCYE 119
Query: 129 CGERGHIERNC 139
CG RGH R+C
Sbjct: 120 CGGRGHFARHC 130
>gi|307187926|gb|EFN72839.1| RNA-binding protein 1 [Camponotus floridanus]
Length = 213
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDA 57
M RY + ++YVG L S +LE FS+YG +R++ + R+ FAFVEF DPRDA
Sbjct: 1 MSRYREWDLSCKVYVGNLGSSASKHELEGKFSKYGPLRNIWVARNPPGFAFVEFEDPRDA 60
Query: 58 DDARYSLNGRDVDGSRIIVEF 78
+DA L+G + G+R+ VE
Sbjct: 61 EDAVRGLDGVHLCGTRVRVEM 81
>gi|47086241|ref|NP_998064.1| splicing factor, arginine/serine-rich 9 [Danio rerio]
gi|45501375|gb|AAH67134.1| Zgc:77449 [Danio rerio]
Length = 244
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 5/74 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD-----FAFVEFSDPRDADDARYSLNG 66
R+YVG L + RD+E++F +YG+IRD+++K + FAFV F DPRDA+DA + NG
Sbjct: 5 RIYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRSTIPFAFVRFEDPRDAEDAVFGRNG 64
Query: 67 RDVDGSRIIVEFAR 80
++ VE+ R
Sbjct: 65 YGFGDCKLRVEYPR 78
>gi|350596827|ref|XP_003128414.2| PREDICTED: serine/arginine-rich splicing factor 3-like [Sus scrofa]
Length = 151
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 102
+ G R+ VE + G R SR RGPPP G
Sbjct: 70 TLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|159155810|gb|AAI54584.1| Zgc:77449 protein [Danio rerio]
Length = 246
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 5/74 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD-----FAFVEFSDPRDADDARYSLNG 66
R+YVG L + RD+E++F +YG+IRD+++K + FAFV F DPRDA+DA + NG
Sbjct: 5 RIYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRSTIPFAFVRFEDPRDAEDAVFGRNG 64
Query: 67 RDVDGSRIIVEFAR 80
++ VE+ R
Sbjct: 65 YGFGDCKLRVEYPR 78
>gi|296487190|tpg|DAA29303.1| TPA: splicing factor, arginine/serine-rich 3-like [Bos taurus]
Length = 164
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 102
+ G R+ VE + G R SR RGPPP G
Sbjct: 70 TLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|4506901|ref|NP_003008.1| serine/arginine-rich splicing factor 3 [Homo sapiens]
gi|8567402|ref|NP_038691.1| serine/arginine-rich splicing factor 3 [Mus musculus]
gi|77736345|ref|NP_001029872.1| serine/arginine-rich splicing factor 3 [Bos taurus]
gi|114145746|ref|NP_001041372.1| splicing factor, arginine/serine-rich 3 [Rattus norvegicus]
gi|305855200|ref|NP_001182245.1| serine/arginine-rich splicing factor 3 [Ovis aries]
gi|307078119|ref|NP_001182483.1| splicing factor, arginine/serine-rich 3 [Gallus gallus]
gi|307078159|ref|NP_001182496.1| splicing factor, arginine/serine-rich 3 [Pongo abelii]
gi|350538573|ref|NP_001232578.1| putative splicing factor arginine/serine-rich 3 variant 2
[Taeniopygia guttata]
gi|114607174|ref|XP_001173216.1| PREDICTED: uncharacterized protein LOC747921 isoform 5 [Pan
troglodytes]
gi|126309787|ref|XP_001370000.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Monodelphis
domestica]
gi|149732155|ref|XP_001499880.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Equus
caballus]
gi|296198029|ref|XP_002746526.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 2
[Callithrix jacchus]
gi|301756971|ref|XP_002914334.1| PREDICTED: splicing factor, arginine/serine-rich 3-like [Ailuropoda
melanoleuca]
gi|326933663|ref|XP_003212920.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Meleagris
gallopavo]
gi|332255653|ref|XP_003276947.1| PREDICTED: serine/arginine-rich splicing factor 3 isoform 1
[Nomascus leucogenys]
gi|332255655|ref|XP_003276948.1| PREDICTED: serine/arginine-rich splicing factor 3 isoform 2
[Nomascus leucogenys]
gi|332823925|ref|XP_003311314.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|338717417|ref|XP_003363635.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Equus
caballus]
gi|344263812|ref|XP_003403989.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Loxodonta
africana]
gi|345778693|ref|XP_532124.3| PREDICTED: serine/arginine-rich splicing factor 3 [Canis lupus
familiaris]
gi|348576314|ref|XP_003473932.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Cavia
porcellus]
gi|350586583|ref|XP_003482220.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Sus scrofa]
gi|395534031|ref|XP_003769052.1| PREDICTED: serine/arginine-rich splicing factor 3 [Sarcophilus
harrisii]
gi|395832270|ref|XP_003789196.1| PREDICTED: serine/arginine-rich splicing factor 3 [Otolemur
garnettii]
gi|397496243|ref|XP_003818951.1| PREDICTED: serine/arginine-rich splicing factor 3 [Pan paniscus]
gi|402866823|ref|XP_003897573.1| PREDICTED: serine/arginine-rich splicing factor 3 [Papio anubis]
gi|403261702|ref|XP_003923252.1| PREDICTED: serine/arginine-rich splicing factor 3 [Saimiri
boliviensis boliviensis]
gi|410040712|ref|XP_003950873.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|410040714|ref|XP_003950874.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|410959034|ref|XP_003986117.1| PREDICTED: serine/arginine-rich splicing factor 3 [Felis catus]
gi|426352928|ref|XP_004043955.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla gorilla
gorilla]
gi|426352930|ref|XP_004043956.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla gorilla
gorilla]
gi|426352932|ref|XP_004043957.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla gorilla
gorilla]
gi|426352934|ref|XP_004043958.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla gorilla
gorilla]
gi|441648624|ref|XP_004090899.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|441648629|ref|XP_004090900.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|441648632|ref|XP_004090901.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|51338672|sp|P84103.1|SRSF3_HUMAN RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Pre-mRNA-splicing factor SRP20; AltName:
Full=Splicing factor, arginine/serine-rich 3
gi|51338673|sp|P84104.1|SRSF3_MOUSE RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Pre-mRNA-splicing factor SRP20; AltName:
Full=Protein X16; AltName: Full=Splicing factor,
arginine/serine-rich 3
gi|122145080|sp|Q3SZR8.1|SRSF3_BOVIN RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Splicing factor, arginine/serine-rich 3
gi|5531904|gb|AAD44523.1|AF107405_1 pre-mRNA splicing factor [Homo sapiens]
gi|55440|emb|CAA37821.1| X16 [Mus musculus]
gi|338484|gb|AAA36648.1| pre-mRNA splicing factor [Homo sapiens]
gi|2125863|emb|CAA62844.1| splicing factor [Mus musculus]
gi|12654193|gb|AAH00914.1| Splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|12847924|dbj|BAB27762.1| unnamed protein product [Mus musculus]
gi|26347593|dbj|BAC37445.1| unnamed protein product [Mus musculus]
gi|30582873|gb|AAP35663.1| splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|45768791|gb|AAH68111.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|46362469|gb|AAH69018.1| Splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|47940164|gb|AAH71196.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|53734444|gb|AAH83316.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|60655009|gb|AAX32068.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|60655011|gb|AAX32069.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|74137380|dbj|BAE22040.1| unnamed protein product [Mus musculus]
gi|74139940|dbj|BAE31808.1| unnamed protein product [Mus musculus]
gi|74179670|dbj|BAE22483.1| unnamed protein product [Mus musculus]
gi|74181349|dbj|BAE29950.1| unnamed protein product [Mus musculus]
gi|74203068|dbj|BAE26230.1| unnamed protein product [Mus musculus]
gi|74216995|dbj|BAE26606.1| unnamed protein product [Mus musculus]
gi|74222015|dbj|BAE26830.1| unnamed protein product [Mus musculus]
gi|74226734|dbj|BAE27015.1| unnamed protein product [Mus musculus]
gi|74354685|gb|AAI02736.1| Splicing factor, arginine/serine-rich 3 [Bos taurus]
gi|90076534|dbj|BAE87947.1| unnamed protein product [Macaca fascicularis]
gi|90080349|dbj|BAE89656.1| unnamed protein product [Macaca fascicularis]
gi|109692284|gb|ABG37970.1| unknown [Rattus norvegicus]
gi|119624306|gb|EAX03901.1| splicing factor, arginine/serine-rich 3, isoform CRA_d [Homo
sapiens]
gi|119624308|gb|EAX03903.1| splicing factor, arginine/serine-rich 3, isoform CRA_d [Homo
sapiens]
gi|148690659|gb|EDL22606.1| mCG21131, isoform CRA_d [Mus musculus]
gi|149043499|gb|EDL96950.1| rCG61099, isoform CRA_c [Rattus norvegicus]
gi|165875525|gb|ABY68590.1| pre-mRNA splicing factor SRP20-like protein [Ovis aries]
gi|189069112|dbj|BAG35450.1| unnamed protein product [Homo sapiens]
gi|197127497|gb|ACH43995.1| putative splicing factor arginine/serine-rich 3 variant 2
[Taeniopygia guttata]
gi|197692159|dbj|BAG70043.1| splicing factor arginine/serine-rich 3 [Homo sapiens]
gi|197692405|dbj|BAG70166.1| splicing factor arginine/serine-rich 3 [Homo sapiens]
gi|261860472|dbj|BAI46758.1| splicing factor, arginine/serine-rich 3 [synthetic construct]
gi|296474519|tpg|DAA16634.1| TPA: splicing factor, arginine/serine-rich 3 [Bos taurus]
gi|349603122|gb|AEP99052.1| Splicing factor, arginine/serine-rich 3-like protein [Equus
caballus]
gi|351701484|gb|EHB04403.1| Splicing factor, arginine/serine-rich 3 [Heterocephalus glaber]
gi|380815558|gb|AFE79653.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
gi|383420725|gb|AFH33576.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
gi|410221336|gb|JAA07887.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|410221338|gb|JAA07888.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|410357561|gb|JAA44572.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|417396397|gb|JAA45232.1| Putative serine/arginine-rich splicing factor 3 [Desmodus rotundus]
gi|431916817|gb|ELK16577.1| Splicing factor, arginine/serine-rich 3 [Pteropus alecto]
Length = 164
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 102
+ G R+ VE + G R SR RGPPP G
Sbjct: 70 TLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|221221358|gb|ACM09340.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 170
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGRD 68
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 15 KVYVGNLGNNGNKTELERSFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 74
Query: 69 VDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGR 103
+ GSR+ VE + G + RGPPP R
Sbjct: 75 LSGSRVRVELS-------NGEKRTRNRGPPPSWSR 102
>gi|327271253|ref|XP_003220402.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Anolis
carolinensis]
Length = 164
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 102
+ G R+ VE + G R SR RGPPP G
Sbjct: 70 TLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|225714302|gb|ACO12997.1| Splicing factor, arginine/serine-rich 7 [Lepeophtheirus salmonis]
Length = 306
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 76/166 (45%), Gaps = 39/166 (23%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNG 66
G R++V L RD+E++F ++G ++++ M R FAFV F DA+D S +G
Sbjct: 162 GYRIHVADLDVSATKRDMEKVFGKFGPLKEIWMARSVPCFAFVVFRYREDAEDGVRSADG 221
Query: 67 RDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKC 126
++ G RI V AR PR G R R FN + +C
Sbjct: 222 VEISGRRIRVTHAR--PRTKGRGR------------RGFNPNM---------------RC 252
Query: 127 YRCGERGHIERNCQNSPKKLRPRSYSRSPSPRRG--RSRSRSYSRG 170
Y+CG+RGH R+C ++ Y R PSPR R R Y RG
Sbjct: 253 YQCGDRGHFSRDCPDTKY-----GYKRPPSPRYSSRRDSDRHYDRG 293
>gi|30584291|gb|AAP36394.1| Homo sapiens splicing factor, arginine/serine-rich 3 [synthetic
construct]
gi|61371593|gb|AAX43696.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|61371598|gb|AAX43697.1| splicing factor arginine/serine-rich 3 [synthetic construct]
Length = 165
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 102
+ G R+ VE + G R SR RGPPP G
Sbjct: 70 TLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|221219360|gb|ACM08341.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 170
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGRD 68
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 15 KVYVGNLGNNGNKTELERSFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 74
Query: 69 VDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGR 103
+ GSR+ VE + G + RGPPP R
Sbjct: 75 LSGSRVRVELS-------NGEKRTRNRGPPPSWSR 102
>gi|392333750|ref|XP_003752989.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Rattus
norvegicus]
gi|392354119|ref|XP_003751684.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Rattus
norvegicus]
Length = 147
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 102
+ G R+ VE + G R SR RGPPP G
Sbjct: 70 TLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|391333364|ref|XP_003741086.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Metaseiulus occidentalis]
Length = 162
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++Y+G LA+ D+E +FS+YG +R+V + R+ FAFVEF D RDA+DA +++G
Sbjct: 10 CKVYIGNLATHASRHDVESVFSKYGNLRNVWVARNPPGFAFVEFEDSRDAEDAVRAVDGS 69
Query: 68 DVDGSRIIVEFARG 81
+ GSR+ E + G
Sbjct: 70 RICGSRVKCEMSHG 83
>gi|299469752|emb|CBN76606.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 330
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 5/76 (6%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLN 65
R+Y+G L +D++++F ++GRI D+D+K F F+ F D RDA++A + +
Sbjct: 2 ARIYIGNLPMDVTEKDMDDVFYKFGRIVDIDLKTPARPPAFGFITFQDARDAEEAVRARD 61
Query: 66 GRDVDGSRIIVEFARG 81
G D+DGSR+ VE +RG
Sbjct: 62 GYDMDGSRLRVEISRG 77
>gi|449271649|gb|EMC81933.1| Splicing factor, arginine/serine-rich 3 [Columba livia]
Length = 156
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 102
+ G R+ VE + G R SR RGPPP G
Sbjct: 70 TLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|357119205|ref|XP_003561336.1| PREDICTED: uncharacterized protein LOC100827239 [Brachypodium
distachyon]
Length = 314
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 20/127 (15%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDM--------KRDFAFVEFSDPRDADDARY 62
+R++VG L+ T R LEE F R+G++ D + R F FV FSDPR + A
Sbjct: 7 SRIFVGGLSFHTDERKLEEAFRRFGKVVDAQIMLERHTNRHRGFGFVTFSDPRAVESAIS 66
Query: 63 SLNGRDVDGSRIIVE------------FARGGPRGPGGSREYLGRGPPPGSGRCFNCGID 110
++ +++DG I V ++ GG RG G+G P G C+ CG
Sbjct: 67 EMHTKELDGRTISVNRAEPKMNTDDTRYSSGGDRGADRGDYRGGKGDGPPPGNCYQCGRA 126
Query: 111 GHWARDC 117
GHWARDC
Sbjct: 127 GHWARDC 133
>gi|12844972|dbj|BAB26569.1| unnamed protein product [Mus musculus]
Length = 164
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 102
+ G R+ VE + G R SR RGPPP G
Sbjct: 70 TLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|148612890|ref|NP_542781.3| serine/arginine-rich splicing factor 12 [Homo sapiens]
gi|47606193|sp|Q8WXF0.1|SRS12_HUMAN RecName: Full=Serine/arginine-rich splicing factor 12; AltName:
Full=35 kDa SR repressor protein; Short=SRrp35;
AltName: Full=Splicing factor, arginine/serine-rich
13B; AltName: Full=Splicing factor,
arginine/serine-rich 19
gi|18034491|gb|AAL57515.1|AF449428_1 SRrp35 [Homo sapiens]
gi|189054199|dbj|BAG36719.1| unnamed protein product [Homo sapiens]
gi|261859278|dbj|BAI46161.1| 35 kDa SR repressor protein [synthetic construct]
gi|380809714|gb|AFE76732.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
gi|384945376|gb|AFI36293.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
Length = 261
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 54/95 (56%), Gaps = 9/95 (9%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDF--------AFVEFS 52
M RY R T L++ +A TR DL F RYG I DV + DF A+V+F
Sbjct: 1 MSRYT-RPPNTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFE 59
Query: 53 DPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPG 87
D RDA+DA Y+LN + V G +I ++FA+G + PG
Sbjct: 60 DVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPG 94
>gi|403256025|ref|XP_003920702.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Saimiri
boliviensis boliviensis]
Length = 391
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|299753075|ref|XP_001833047.2| hypothetical protein CC1G_01109 [Coprinopsis cinerea
okayama7#130]
gi|298410132|gb|EAU88736.2| hypothetical protein CC1G_01109 [Coprinopsis cinerea
okayama7#130]
Length = 279
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 43/69 (62%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
RLY+GRL RS D+ + F YGRI D + F FVEF +DA+DA + NG+ G
Sbjct: 4 RLYLGRLPPDARSDDVSKFFEGYGRIIDCRVMTGFGFVEFESSKDAEDAVHQFNGKPFMG 63
Query: 72 SRIIVEFAR 80
+ I+VEFA+
Sbjct: 64 TAIVVEFAK 72
>gi|308466765|ref|XP_003095634.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
gi|308244633|gb|EFO88585.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
Length = 328
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 6/72 (8%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMK---RD---FAFVEFSDPRDADDARYSLNG 66
+YVG L S R +++E+IF +YG IR++D+K RD FAF++F D RDA +A + +G
Sbjct: 6 VYVGNLPSNVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRARDG 65
Query: 67 RDVDGSRIIVEF 78
+ DG R+ VEF
Sbjct: 66 YEFDGKRLRVEF 77
>gi|428183363|gb|EKX52221.1| hypothetical protein GUITHDRAFT_41825, partial [Guillardia theta
CCMP2712]
Length = 195
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 7/84 (8%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L R+RD+E++F +YGRIRD+++K FAFV F D RDA+DA +G
Sbjct: 1 IYVGNLPLDIRTRDIEDLFYKYGRIRDIEVKTPNRPPAFAFVSFEDYRDAEDAIRGRDGI 60
Query: 68 DVDGSRIIVEFARGGPRGPGGSRE 91
+G+R+ E +RG GP GSR+
Sbjct: 61 SFEGARLRCEMSRGN--GPRGSRQ 82
>gi|403418011|emb|CCM04711.1| predicted protein [Fibroporia radiculosa]
Length = 328
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 42/69 (60%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
RLY+GRL RS D+ + F YGRI D + F FVEF RDADDA NG+ G
Sbjct: 4 RLYLGRLPPDARSEDVSKFFDGYGRIVDCRVMTGFGFVEFESSRDADDAVRDFNGKAFMG 63
Query: 72 SRIIVEFAR 80
+ I+VEFA+
Sbjct: 64 ANIVVEFAK 72
>gi|291407986|ref|XP_002720309.1| PREDICTED: splicing factor, arginine/serine-rich 1 [Oryctolagus
cuniculus]
Length = 343
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMK-----RDFAFVEFSDPRDADDARYSLNG 66
R+YVG L +R+++++F +YG +RDVD+K R FAFVEF+ PRDA +A + +G
Sbjct: 16 RIYVGNLPPDIGTREVKDMFYKYGTVRDVDLKNRRWGRPFAFVEFNSPRDAHNAVHGRDG 75
Query: 67 RDVDGSRIIVEFARGGPRGPGGSREYL 93
D +G R+ VEF R GG R L
Sbjct: 76 YDYEGYRLRVEFPRNYRAIYGGGRGLL 102
>gi|403182431|gb|EJY57381.1| AAEL017082-PA [Aedes aegypti]
Length = 243
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 63/124 (50%), Gaps = 17/124 (13%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +++E+ FS YG +R+V + R+ FAFVEF D RDA+D+ L+GR
Sbjct: 12 AKVYVGELGNNASKQEIEDAFSYYGPLRNVWVARNPPGFAFVEFDDARDAEDSVRGLDGR 71
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG--------------RCFNCGIDGHW 113
V G R+ VE + G G G G RC+ CG GH+
Sbjct: 72 TVCGRRVRVELSTGKGGRGFRGGGGGGGGGGGGGPPRGKGGRGAFNPDDRCYECGGRGHY 131
Query: 114 ARDC 117
ARDC
Sbjct: 132 ARDC 135
>gi|149640565|ref|XP_001509029.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Ornithorhynchus anatinus]
Length = 164
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 102
+ G R+ VE + G R RGPPP G
Sbjct: 70 TLCGCRVRVELSNGEKRN-------RNRGPPPSWG 97
>gi|198432543|ref|XP_002131859.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1
[Ciona intestinalis]
Length = 235
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 60/107 (56%), Gaps = 7/107 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
R+YVG L R +D+E++F +YG IR V++K FAFVEF D RDA+D+ + NG
Sbjct: 10 RVYVGNLPPDVREKDVEDLFYKYGSIRHVNLKNRRGPPFAFVEFEDRRDAEDSVHGRNGY 69
Query: 68 DVDGSRIIVEFARG-GP--RGPGGSREYLGRGPPPGSGRCFNCGIDG 111
+ DG ++ VE RG GP R G + RG PP F + G
Sbjct: 70 NFDGYKLRVEHPRGNGPSQRPAYGMSSFRARGGPPSRRTDFRVMVSG 116
>gi|402860841|ref|XP_003894827.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Papio
anubis]
Length = 391
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDQKINKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|159463554|ref|XP_001690007.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283995|gb|EDP09745.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 338
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Query: 8 YGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARY 62
GTR++VG L R R++E++F +YGRIR VD+K FAFVEF D RDA DA
Sbjct: 1 MAGTRVFVGNLPMDVREREVEDLFFKYGRIRSVDLKIGPRPPAFAFVEFEDERDAADAVR 60
Query: 63 SLNGRDVDGSRIIVEFARG 81
+G + G R+ VE + G
Sbjct: 61 GRDGIEFQGQRLRVEVSHG 79
>gi|115466838|ref|NP_001057018.1| Os06g0187900 [Oryza sativa Japonica Group]
gi|75322869|sp|Q69KL9.1|RZ21A_ORYSJ RecName: Full=Serine/arginine-rich splicing factor RSZ21A; AltName:
Full=RS-containing zinc finger protein 21A;
Short=Os-RSZ21a; Short=Os-RSZp21a
gi|51091721|dbj|BAD36521.1| putative splicing factor, arginine/serine-rich 7 [Oryza sativa
Japonica Group]
gi|55773877|dbj|BAD72462.1| putative splicing factor, arginine/serine-rich 7 [Oryza sativa
Japonica Group]
gi|113595058|dbj|BAF18932.1| Os06g0187900 [Oryza sativa Japonica Group]
gi|215686646|dbj|BAG88899.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701257|dbj|BAG92681.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 185
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 14/112 (12%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
R+YVG L R +R+LE+ F +G +R V + R FAF++F D RDA DA R
Sbjct: 2 ARVYVGNLDPRVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAI-----R 56
Query: 68 DVDGSRII-VEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCK 118
D+DG VE +R G GG Y +C+ CG GH+AR+C+
Sbjct: 57 DIDGKNGWRVELSRNASSGRGGRDRY-----GSSESKCYECGETGHFARECR 103
>gi|449267951|gb|EMC78842.1| Heterogeneous nuclear ribonucleoprotein G [Columba livia]
Length = 385
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAQDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|25150290|ref|NP_499649.2| Protein RSP-3 [Caenorhabditis elegans]
gi|56749665|sp|Q9NEW6.2|RSP3_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 3;
AltName: Full=CeSF2; AltName: Full=CeSF2/ASF
gi|21615505|emb|CAC35847.2| Protein RSP-3 [Caenorhabditis elegans]
Length = 258
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
++YVG L R +++E+IF +YGRI+ VD+K FAFVEF D RDA+DA + +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 68 DVDGSRIIVEFA 79
+ DG RI VEF
Sbjct: 70 EFDGRRIRVEFT 81
>gi|145497457|ref|XP_001434717.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401845|emb|CAK67320.1| unnamed protein product [Paramecium tetraurelia]
Length = 191
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 25 RDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFA---RG 81
+D+ +IF +YG I++V K ++FV FS+ ++A +A S NG+ +G ++ V+ +G
Sbjct: 23 KDVRDIFKKYGAIKEVAYKGSYSFVTFSNEQEAQEALKSTNGQTYNGQKLKVDVVDNRKG 82
Query: 82 GPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
GP +CF C GHWAR+C
Sbjct: 83 RKTGPN------------EEDKCFKCNKGGHWARNC 106
>gi|268561908|ref|XP_002646556.1| Hypothetical protein CBG20414 [Caenorhabditis briggsae]
Length = 308
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMK-----RDFAFVEFSDPRDADDARYSLNGR 67
+++G L R ++L+ +FS+YGRI VD+K F FV+FSD RDADDA +G
Sbjct: 9 IFIGNLPGDVREKELDSLFSKYGRINKVDVKSGRGGAAFGFVQFSDSRDADDAVRGRDGY 68
Query: 68 DVDGSRIIVEFA 79
D DG RI VE
Sbjct: 69 DFDGKRIRVELT 80
>gi|344247055|gb|EGW03159.1| Heterogeneous nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 384
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|297711157|ref|XP_002832216.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Pongo abelii]
Length = 438
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 56 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 115
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 116 MNGKSLDGKAIKVEQA 131
>gi|28629815|gb|AAO45173.1| splicing factor arginine/serine-rich 3 [Paralichthys olivaceus]
Length = 168
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 14 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDASDAVRELDGR 73
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 102
++ G ++ VE + G R SR RGPPP G
Sbjct: 74 NMCGCKLRVELSTGEKR----SRS---RGPPPSWG 101
>gi|56118384|ref|NP_001007946.1| serine/arginine-rich splicing factor 12 [Xenopus (Silurana)
tropicalis]
gi|51513232|gb|AAH80452.1| serine-arginine repressor protein (35 kDa) [Xenopus (Silurana)
tropicalis]
gi|89272962|emb|CAJ83214.1| serine-arginine repressor protein (35 kDa) [Xenopus (Silurana)
tropicalis]
Length = 253
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDF--------AFVEFSDPRDADDARY 62
T L+V +A TR DL F RYG I DV + DF A+++F D RDA+DA Y
Sbjct: 10 TSLFVRNVADATRPEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYIQFEDVRDAEDALY 69
Query: 63 SLNGRDVDGSRIIVEFARGGPRGPG 87
+LN + V G +I ++FA+G + PG
Sbjct: 70 NLNRKWVCGRQIEIQFAQGDRKTPG 94
>gi|119331082|ref|NP_001073196.1| heterogeneous nuclear ribonucleoprotein G [Gallus gallus]
gi|53130710|emb|CAG31684.1| hypothetical protein RCJMB04_9j22 [Gallus gallus]
gi|169139272|gb|ACA48585.1| RNA binding motif protein, X-linked [Gallus gallus]
Length = 385
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|52346014|ref|NP_001005054.1| serine/arginine-rich splicing factor 3 [Xenopus (Silurana)
tropicalis]
gi|49900231|gb|AAH76942.1| splicing factor, arginine serine-rich 3 [Xenopus (Silurana)
tropicalis]
gi|89266750|emb|CAJ83969.1| splicing factor, arginine/serine-rich 3 [Xenopus (Silurana)
tropicalis]
Length = 164
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPP 99
+ G R+ VE + G R SR RGPPP
Sbjct: 70 TLCGCRVRVELSNGEKR----SRN---RGPPP 94
>gi|194767988|ref|XP_001966096.1| GF19500 [Drosophila ananassae]
gi|190622981|gb|EDV38505.1| GF19500 [Drosophila ananassae]
Length = 179
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDA 57
MPRY + ++YVG L S ++E FS+YG +R+V + R+ FAFVEF D RDA
Sbjct: 1 MPRYREWDLACKVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDA 60
Query: 58 DDARYSLNGRDVDGSRIIVEF 78
+DA L+G G+RI VE
Sbjct: 61 EDATRGLDGTRCCGTRIRVEM 81
>gi|449498359|ref|XP_004175818.1| PREDICTED: RNA-binding motif protein, X chromosome isoform 2
[Taeniopygia guttata]
Length = 385
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|326924314|ref|XP_003208374.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Meleagris gallopavo]
Length = 385
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|346716298|ref|NP_001231025.1| heterogeneous nuclear ribonucleoprotein G [Sus scrofa]
Length = 390
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|285012962|ref|NP_001165510.1| heterogeneous nuclear ribonucleoprotein G [Bos taurus]
gi|348557903|ref|XP_003464758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like [Cavia
porcellus]
gi|284080621|gb|ADB77884.1| Rbmx [Bos taurus]
gi|296471213|tpg|DAA13328.1| TPA: RNA binding motif protein, X-linked isoform 1 [Bos taurus]
gi|440895247|gb|ELR47495.1| Heterogeneous nuclear ribonucleoprotein G [Bos grunniens mutus]
Length = 391
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|6755296|ref|NP_035382.1| RNA-binding motif protein, X chromosome [Mus musculus]
gi|262231769|ref|NP_001160095.1| RNA-binding motif protein, X chromosome [Mus musculus]
gi|81917893|sp|Q9WV02.1|RBMX_MOUSE RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding
motif protein, X chromosome, N-terminally processed
gi|5579011|emb|CAB51362.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
gi|13277600|gb|AAH03710.1| RNA binding motif protein, X chromosome [Mus musculus]
gi|74149379|dbj|BAE22448.1| unnamed protein product [Mus musculus]
gi|148710228|gb|EDL42174.1| RNA binding motif protein, X chromosome, isoform CRA_e [Mus
musculus]
Length = 391
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|332377011|gb|AEE63645.1| unknown [Dendroctonus ponderosae]
Length = 356
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+++VG L T++ + E+F ++G + + D+ R++ FV D ++A LNG+ VD
Sbjct: 89 IKIFVGNLTDNTKAPQIRELFKKFGTVVECDIVRNYGFVHLESSGDVNEAIKDLNGQIVD 148
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
G + V+ + R+ G G P +C+ CG GHW+++C G
Sbjct: 149 GQPMKVQIS------TSRVRQRPGMGDPE---QCYRCGRGGHWSKECPKG 189
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 42/72 (58%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRD 68
G +++VG LA +T +L +F +YG++ + D+ +++ FV + + +A LNG+
Sbjct: 8 GTFKIFVGNLAEKTSVSELRPLFEKYGKVVECDVVKNYGFVHMENESEGREAIQQLNGQM 67
Query: 69 VDGSRIIVEFAR 80
++G + E A+
Sbjct: 68 INGQSMKCEAAK 79
>gi|218197725|gb|EEC80152.1| hypothetical protein OsI_21961 [Oryza sativa Indica Group]
Length = 264
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 12/111 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
R+YVG L R +R+LE+ F +G +R V + R FAF++F D RDA DA ++G+
Sbjct: 81 ARVYVGNLDPRVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDIDGK 140
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCK 118
+G R VE +R G GG Y +C+ CG GH+AR+C+
Sbjct: 141 --NGWR--VELSRNASSGRGGRDRYGS-----SESKCYECGETGHFARECR 182
>gi|71043834|ref|NP_001020834.1| RNA-binding motif protein, X chromosome [Rattus norvegicus]
gi|81907907|sp|Q4V898.1|RBMX_RAT RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; AltName: Full=RNA-binding motif protein,
X chromosome retrogene; AltName: Full=RNA-binding motif
protein, X chromosome retrogene-like; Contains:
RecName: Full=RNA-binding motif protein, X chromosome,
N-terminally processed
gi|66910650|gb|AAH97479.1| RNA binding motif protein, X-linked [Rattus norvegicus]
gi|149015799|gb|EDL75123.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_b [Rattus norvegicus]
Length = 390
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|355715855|gb|AES05424.1| RNA binding motif protein, X-linked [Mustela putorius furo]
Length = 392
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 10 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 69
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 70 MNGKSLDGKAIKVEQA 85
>gi|344297709|ref|XP_003420539.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Loxodonta
africana]
Length = 391
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|291401898|ref|XP_002717345.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
gi|291408303|ref|XP_002720376.1| PREDICTED: RNA binding motif protein, X-linked [Oryctolagus
cuniculus]
Length = 391
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|291400889|ref|XP_002716811.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
Length = 391
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|355757746|gb|EHH61271.1| hypothetical protein EGM_19240 [Macaca fascicularis]
Length = 391
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|301769089|ref|XP_002919961.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Ailuropoda melanoleuca]
gi|281352732|gb|EFB28316.1| hypothetical protein PANDA_008640 [Ailuropoda melanoleuca]
Length = 391
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|224097264|ref|XP_002190045.1| PREDICTED: RNA-binding motif protein, X chromosome isoform 1
[Taeniopygia guttata]
Length = 377
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|56699409|ref|NP_002130.2| RNA-binding motif protein, X chromosome isoform 1 [Homo sapiens]
gi|206725512|ref|NP_001128678.1| RNA-binding motif protein, X chromosome [Pan troglodytes]
gi|74008547|ref|XP_866434.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G isoform 6
[Canis lupus familiaris]
gi|149755726|ref|XP_001489601.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Equus
caballus]
gi|397482297|ref|XP_003812367.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Pan
paniscus]
gi|410989483|ref|XP_004000991.1| PREDICTED: RNA-binding motif protein, X chromosome [Felis catus]
gi|23503093|sp|P38159.3|RBMX_HUMAN RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Glycoprotein p43; AltName: Full=Heterogeneous
nuclear ribonucleoprotein G; Short=hnRNP G; Contains:
RecName: Full=RNA-binding motif protein, X chromosome,
N-terminally processed
gi|160395526|sp|A5A6M3.1|RBMX_PANTR RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding
motif protein, X chromosome, N-terminally processed
gi|13938569|gb|AAH07435.1| RNA binding motif protein, X-linked [Homo sapiens]
gi|14279350|gb|AAK58567.1| RBMX [Homo sapiens]
gi|16306856|gb|AAH06550.1| RNA binding motif protein, X-linked [Homo sapiens]
gi|39545947|gb|AAR28036.1| heterogeneous nuclear ribonucleoprotein G [Homo sapiens]
gi|119608859|gb|EAW88453.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608860|gb|EAW88454.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608861|gb|EAW88455.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608863|gb|EAW88457.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|123993071|gb|ABM84137.1| RNA binding motif protein, X-linked [synthetic construct]
gi|124000061|gb|ABM87539.1| RNA binding motif protein, X-linked [synthetic construct]
gi|146741480|dbj|BAF62396.1| RNA binding motif protein, X-linked [Pan troglodytes verus]
gi|410266422|gb|JAA21177.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266426|gb|JAA21179.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266428|gb|JAA21180.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266430|gb|JAA21181.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266432|gb|JAA21182.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266434|gb|JAA21183.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266436|gb|JAA21184.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348962|gb|JAA41085.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348964|gb|JAA41086.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348966|gb|JAA41087.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348968|gb|JAA41088.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348970|gb|JAA41089.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348972|gb|JAA41090.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348974|gb|JAA41091.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348976|gb|JAA41092.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|343959058|dbj|BAK63384.1| heterogeneous nuclear ribonucleoprotein G [Pan troglodytes]
Length = 391
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|327286671|ref|XP_003228053.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform
1 [Anolis carolinensis]
Length = 384
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|308490885|ref|XP_003107634.1| CRE-RSP-3 protein [Caenorhabditis remanei]
gi|308250503|gb|EFO94455.1| CRE-RSP-3 protein [Caenorhabditis remanei]
Length = 262
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
++YVG L R +++E+IF +YGRI+ +D+K FAFVEF D RDA+DA + +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYIDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 68 DVDGSRIIVEFA 79
+ DG RI VEF
Sbjct: 70 EFDGRRIRVEFT 81
>gi|354472430|ref|XP_003498442.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Cricetulus
griseus]
Length = 167
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 10/96 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +L+ F YG +R V + R+ F FV+F DPRDA DA L+G+
Sbjct: 10 CKVYVGNLGNNANKTELKWAFGYYGPLRSVWVARNPPGFVFVKFEDPRDATDAVRELDGK 69
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGR 103
+ G R+ +E + G R L RGPPP G+
Sbjct: 70 RLSGCRVKMELSNGEKRS-------LNRGPPPSWGQ 98
>gi|308459689|ref|XP_003092160.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
gi|308254090|gb|EFO98042.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
Length = 333
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 6/72 (8%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMK---RD---FAFVEFSDPRDADDARYSLNG 66
+YVG L S R +++E+IF +YG IR++D+K RD FAF++F D RDA +A + +G
Sbjct: 6 VYVGNLPSDVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRARDG 65
Query: 67 RDVDGSRIIVEF 78
+ DG R+ VEF
Sbjct: 66 YEFDGKRLRVEF 77
>gi|3256007|emb|CAA80599.1| hnRNP G protein [Homo sapiens]
Length = 391
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|426257491|ref|XP_004022360.1| PREDICTED: RNA-binding motif protein, X chromosome [Ovis aries]
Length = 391
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|224109842|ref|XP_002315330.1| predicted protein [Populus trichocarpa]
gi|222864370|gb|EEF01501.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 59/129 (45%), Gaps = 24/129 (18%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRI--------RDVDMKRDFAFVEFSDPRDADDARY 62
R++VG L+ R LE F R+G+I RD R F F+ F+D R DDA
Sbjct: 7 NRIFVGGLSWDITERQLENAFDRFGKIVESQVMLERDTGRPRGFGFITFADRRAMDDAIR 66
Query: 63 SLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGP--------------PPGSGRCFNCG 108
++GRD G R+I + P+ G ++ RG P G CF CG
Sbjct: 67 EMHGRDF-GDRVI-SVNKAQPKIGGDDSDHGYRGGYSTGSRGGYGGGDRPAGQDECFKCG 124
Query: 109 IDGHWARDC 117
GHWARDC
Sbjct: 125 RSGHWARDC 133
>gi|402911572|ref|XP_003918396.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Papio
anubis]
gi|75076694|sp|Q4R7F0.1|RBMX_MACFA RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding
motif protein, X chromosome, N-terminally processed
gi|67969238|dbj|BAE00972.1| unnamed protein product [Macaca fascicularis]
gi|380813174|gb|AFE78461.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813176|gb|AFE78462.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813178|gb|AFE78463.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813180|gb|AFE78464.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813182|gb|AFE78465.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383411873|gb|AFH29150.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418689|gb|AFH32558.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418691|gb|AFH32559.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418693|gb|AFH32560.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418695|gb|AFH32561.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418697|gb|AFH32562.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418699|gb|AFH32563.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947302|gb|AFI37256.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947304|gb|AFI37257.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947306|gb|AFI37258.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947308|gb|AFI37259.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947310|gb|AFI37260.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947312|gb|AFI37261.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947314|gb|AFI37262.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
Length = 391
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|119608862|gb|EAW88456.1| RNA binding motif protein, X-linked, isoform CRA_b [Homo sapiens]
Length = 221
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|397525476|ref|XP_003832692.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pan paniscus]
Length = 274
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 16 GRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGRDVD 70
G L + R +DLE++F +YGRIR++++K FAFV F DPRDA+DA Y NG D
Sbjct: 72 GNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYG 131
Query: 71 GSRIIVEFAR 80
R+ VEF R
Sbjct: 132 QCRLRVEFPR 141
>gi|4098582|gb|AAD00328.1| RBM1 [Sminthopsis macroura]
Length = 390
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 14/88 (15%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAF+ F P DA DA
Sbjct: 9 KLFIGGLNTETNEKGLESVFGKYGRIVEVLLMKDRETNKSRGFAFITFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVE------FARGGPRG 85
+NG+ +DG I VE F GG RG
Sbjct: 69 MNGKSLDGKSIKVEQATKPSFESGGRRG 96
>gi|542850|pir||S41766 heterogeneous nuclear ribonucleoprotein G - human
Length = 437
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|222635100|gb|EEE65232.1| hypothetical protein OsJ_20394 [Oryza sativa Japonica Group]
Length = 264
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 12/111 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
R+YVG L R +R+LE+ F +G +R V + R FAF++F D RDA DA ++G+
Sbjct: 81 ARVYVGNLDPRVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDIDGK 140
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCK 118
+G R VE +R G GG Y +C+ CG GH+AR+C+
Sbjct: 141 --NGWR--VELSRNASSGRGGRDRYGS-----SESKCYECGETGHFARECR 182
>gi|410227798|gb|JAA11118.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227802|gb|JAA11120.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227804|gb|JAA11121.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227806|gb|JAA11122.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227808|gb|JAA11123.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227810|gb|JAA11124.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227812|gb|JAA11125.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|148678911|gb|EDL10858.1| mCG7984 [Mus musculus]
Length = 388
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI ++ + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|83699420|ref|NP_033059.2| RNA binding motif protein, X-linked-like-1 [Mus musculus]
gi|355390287|ref|NP_001239018.1| RNA binding motif protein, X-linked-like-1 [Mus musculus]
gi|81916088|sp|Q91VM5.1|RMXL1_MOUSE RecName: Full=RNA binding motif protein, X-linked-like-1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
G-like 1; AltName: Full=RNA binding motif protein, X
chromosome retrogene; Contains: RecName: Full=RNA
binding motif protein, X-linked-like-1, N-terminally
processed
gi|15030328|gb|AAH11441.1| Rbmxrt protein [Mus musculus]
gi|26334797|dbj|BAC31099.1| unnamed protein product [Mus musculus]
gi|58476937|gb|AAH89350.1| RNA binding motif protein, X chromosome retrogene [Mus musculus]
Length = 388
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI ++ + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|410308290|gb|JAA32745.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308292|gb|JAA32746.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308294|gb|JAA32747.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308296|gb|JAA32748.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308298|gb|JAA32749.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308300|gb|JAA32750.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308302|gb|JAA32751.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308304|gb|JAA32752.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|354477196|ref|XP_003500808.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Cricetulus griseus]
gi|344244124|gb|EGW00228.1| Heterogeneous nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 388
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI ++ + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|390474384|ref|XP_002757703.2| PREDICTED: RNA-binding motif protein, X chromosome-like, partial
[Callithrix jacchus]
Length = 391
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|209734182|gb|ACI67960.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
gi|221222340|gb|ACM09831.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
gi|303663267|gb|ADM16100.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 172
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGRD 68
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 15 KVYVGNLGNSGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRT 74
Query: 69 VDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGR 103
+ G R+ VE + G + RGPPP R
Sbjct: 75 LSGCRVRVELS-------NGEKRTRSRGPPPSWSR 102
>gi|291049789|ref|NP_001166928.1| RNA binding motif protein [Monodelphis domestica]
gi|284080635|gb|ADB77891.1| RNA binding motif protein [Monodelphis domestica]
Length = 392
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKGLEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKSIKVEQA 84
>gi|351715732|gb|EHB18651.1| Heterogeneous nuclear ribonucleoprotein G [Heterocephalus glaber]
Length = 356
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|417410380|gb|JAA51664.1| Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase,
partial [Desmodus rotundus]
Length = 398
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 10 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 69
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 70 MNGKSLDGKAIKVEQA 85
>gi|260833614|ref|XP_002611807.1| hypothetical protein BRAFLDRAFT_243385 [Branchiostoma floridae]
gi|229297179|gb|EEN67816.1| hypothetical protein BRAFLDRAFT_243385 [Branchiostoma floridae]
Length = 177
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD----FAFVEFSDPRDADDARYSLNGR 67
R+YVG L R +D+E+IF +YG IR +D+K FAFVEF D RDA+DA +G
Sbjct: 9 RIYVGNLPPDIRVKDIEDIFYKYGNIRHIDLKNKRGPPFAFVEFDDKRDAEDAVRGRDGY 68
Query: 68 DVDGSRIIVEF 78
+ DG R+ VEF
Sbjct: 69 NYDGYRLRVEF 79
>gi|22330231|ref|NP_175776.2| cyclophilin 59 [Arabidopsis thaliana]
gi|45680880|gb|AAS75309.1| multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase
[Arabidopsis thaliana]
gi|332194868|gb|AEE32989.1| cyclophilin 59 [Arabidopsis thaliana]
Length = 506
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 12/117 (10%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDF--------AFVEFSDPRDADDARYSL 64
L+V +L T DL IFSR+G + D+ RDF AF+EF + + A + +
Sbjct: 245 LFVCKLNPVTEDEDLHTIFSRFGTVVSADVIRDFKTGDSLCYAFIEFENKESCEQAYFKM 304
Query: 65 NGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGR-CFNCGIDGHWARDCKAG 120
+ +D RI V+F++ + R+ + G G CF CG H A+DC G
Sbjct: 305 DNALIDDRRIHVDFSQSVSKLWSQFRQ---KDSQKGKGNGCFKCGSTDHIAKDCVGG 358
>gi|345306629|ref|XP_001510789.2| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Ornithorhynchus anatinus]
Length = 420
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 35 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 94
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 95 MNGKSLDGKAIKVEQA 110
>gi|294898606|ref|XP_002776298.1| splice factor, putative [Perkinsus marinus ATCC 50983]
gi|239883208|gb|EER08114.1| splice factor, putative [Perkinsus marinus ATCC 50983]
Length = 358
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 8 YGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDM--KRDFAFVEFSDPRDADDARYSLN 65
Y LYVG ++SRT RD+ E F RYGR+ + ++ FVE+ D RDA+DA +
Sbjct: 18 YSRNTLYVGNISSRTTERDITEEFGRYGRVIRCYIPSGKNICFVEYDDERDAEDAYRGMA 77
Query: 66 GRDVDGSRIIVEFARGGPR 84
VDG+ + +++A+ GPR
Sbjct: 78 SARVDGNTLNLQWAKAGPR 96
>gi|395860828|ref|XP_003802706.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Otolemur
garnettii]
Length = 391
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAF+ F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFITFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|354475287|ref|XP_003499861.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Cricetulus griseus]
Length = 289
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|383415877|gb|AFH31152.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
Length = 261
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 9/95 (9%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDF--------AFVEFS 52
M RY R T L++ +A TR DL F RYG I DV + DF A+V+F
Sbjct: 1 MSRYT-RPPNTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFE 59
Query: 53 DPRDADDARYSLNGRDVDGSRIIVEFARGGPRGPG 87
D R+A+DA Y+LN + V G +I ++FA+G + PG
Sbjct: 60 DVREAEDALYNLNRKWVCGRQIEIQFAQGDRKTPG 94
>gi|358336433|dbj|GAA54942.1| splicing factor arginine/serine-rich 1/9 [Clonorchis sinensis]
Length = 251
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNG 66
T++YVG L ++RD+E +FS+YG I ++D+K FAF+EF D DA DA +G
Sbjct: 6 TKIYVGNLPPDVKTRDVENLFSKYGPIAEIDLKSRRGPPFAFIEFEDELDAADAVRGRDG 65
Query: 67 RDVDGSRIIVEFARGGPRGPGGS 89
+ DG + VEF RGG GS
Sbjct: 66 YNFDGYALRVEFPRGGTASYNGS 88
>gi|442751175|gb|JAA67747.1| Putative alternative splicing factor srp20/9g8 rrm superfamily
[Ixodes ricinus]
Length = 164
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F YG +R V + R+ FAF EF DPRDA DA L+GR
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFAEFEDPRDAADAVRELDGR 69
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 102
+ G R+ VE + G R SR RGPPP G
Sbjct: 70 TLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|341889616|gb|EGT45551.1| hypothetical protein CAEBREN_06053 [Caenorhabditis brenneri]
Length = 260
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR----DFAFVEFSDPRDADDARYSLNGR 67
++YVG L R +++E+IF +YGRI+ +D+K FAFVEF D RDA+DA + +G
Sbjct: 11 KVYVGNLPGDVRDKEVEDIFHKYGRIKYIDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 70
Query: 68 DVDGSRIIVEFA 79
+ DG RI VEF
Sbjct: 71 EFDGRRIRVEFT 82
>gi|322801941|gb|EFZ22488.1| hypothetical protein SINV_01609 [Solenopsis invicta]
Length = 289
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDA 57
M RY + ++YVG L S ++E FS+YG +R+V + R+ FAFVEF DPRDA
Sbjct: 28 MSRYREWDLSCKVYVGNLGSSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDA 87
Query: 58 DDARYSLNGRDVDGSRIIVEF 78
+DA L+G G+R+ VE
Sbjct: 88 EDAVRGLDGTRCCGTRVRVEM 108
>gi|82802777|gb|ABB92439.1| RBM1 [Hylobates lar]
Length = 385
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|255648057|gb|ACU24484.1| unknown [Glycine max]
Length = 267
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L S R ++E++F +YGRI D+++K + FVEF + RDA+DA +G
Sbjct: 9 IYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGY 68
Query: 68 DVDGSRIIVEFARGGPRGPGGS 89
+ DG R+ VE A GG RGP S
Sbjct: 69 NFDGCRLRVELAHGG-RGPSSS 89
>gi|387018118|gb|AFJ51177.1| Heterogeneous nuclear ribonucleoprotein G-like [Crotalus
adamanteus]
Length = 384
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L+VG L T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFVGGLNIETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKSIKVEQA 84
>gi|432959076|ref|XP_004086176.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Oryzias
latipes]
Length = 168
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 14 CKVYVGNLGNNGNKTELERAFGYYGPLRTVWVARNPPGFAFVEFEDPRDASDAVRELDGR 73
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPP 99
+ G R+ VE + G R SR RGPPP
Sbjct: 74 TMCGCRVRVELSTGEKR----SRS---RGPPP 98
>gi|387018626|gb|AFJ51431.1| Serine/arginine-rich splicing factor 12-like [Crotalus
adamanteus]
Length = 234
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDF--------AFVEFSDPRDADDAR 61
T L+V +A TR DL F RYG + DV + DF A+++F D RDA+DA
Sbjct: 9 NTSLFVRNVADATRPEDLRREFGRYGPVVDVYIPLDFYTRRPRGFAYIQFEDVRDAEDAL 68
Query: 62 YSLNGRDVDGSRIIVEFARGGPRGPG 87
Y+LN + V G +I ++FA+G + PG
Sbjct: 69 YNLNRKWVCGRQIEIQFAQGDRKTPG 94
>gi|82802775|gb|ABB92438.1| RBM1 [Pongo pygmaeus]
Length = 385
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|363807302|ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycine max]
gi|255636783|gb|ACU18725.1| unknown [Glycine max]
Length = 267
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L S R ++E++F +YGRI D+++K + FVEF + RDA+DA +G
Sbjct: 9 IYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGY 68
Query: 68 DVDGSRIIVEFARGGPRGPGGS 89
+ DG R+ VE A GG RGP S
Sbjct: 69 NFDGCRLRVELAHGG-RGPSSS 89
>gi|158299891|ref|XP_319902.4| AGAP009142-PA [Anopheles gambiae str. PEST]
gi|157013736|gb|EAA43387.4| AGAP009142-PA [Anopheles gambiae str. PEST]
Length = 202
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNG 66
GTR+YVG L + + DLE F++YG++ V + + FAF+EF + +A+ A +LNG
Sbjct: 9 GTRVYVGNLTDKVKKEDLEGEFTKYGKLNSVWVAFNPPGFAFIEFENKEEAETACDNLNG 68
Query: 67 RDVDGSRIIVEFARG--GPRGP 86
+D+ GS++ VE ++G PRG
Sbjct: 69 QDILGSKLRVEISKGRRNPRGA 90
>gi|403300126|ref|XP_003940808.1| PREDICTED: RNA binding motif protein, X-linked-like-1-like,
partial [Saimiri boliviensis boliviensis]
Length = 268
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|159479816|ref|XP_001697982.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158273781|gb|EDO99567.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 320
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 5/76 (6%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNG 66
++VG L R ++L+EIF ++GRIR +D+K+ FAFVEF DPR A++A N
Sbjct: 36 AIFVGNLPYDVREKELDEIFYKFGRIRMIDIKKPARPPGFAFVEFEDPRSAEEAARRRNN 95
Query: 67 RDVDGSRIIVEFARGG 82
+ G R+ VE ARGG
Sbjct: 96 YEFAGMRMRVEIARGG 111
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 72/175 (41%), Gaps = 46/175 (26%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
++VG L R ++L+EIF ++GRIR +D+K+ FAFVEF DPR A++A N
Sbjct: 37 IFVGNLPYDVREKELDEIFYKFGRIRMIDIKKPARPPGFAFVEFEDPRSAEEAARRRNNY 96
Query: 68 DVDGSRIIVEFARGG---------------PRGPGGSREYLGRGP--------------- 97
+ G R+ VE ARGG R G R Y+ P
Sbjct: 97 EFAGMRMRVEIARGGEAAGAQQPLRIGYRPIRNTMGFRLYVKNLPRSASWQDLKDFVRRV 156
Query: 98 -PPGSGRCFN------CGIDGHWAR-DCKAGDWK---NKCYRCGERGHIERNCQN 141
P F G+ ++ D KA K + ++GH R ++
Sbjct: 157 CKPLYTEVFKDNRDNVVGVVEFESKEDMKATVRKLDDTEFANPFDKGHYVRLTED 211
>gi|259155082|ref|NP_001158783.1| Heterogeneous nuclear ribonucleoprotein G [Salmo salar]
gi|223647384|gb|ACN10450.1| Heterogeneous nuclear ribonucleoprotein G [Salmo salar]
Length = 290
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE+ FS+YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLDTETNEKALEKHFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKPIKVEQA 84
>gi|356516144|ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 263
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L S R ++E++F +YGRI D+++K + FVEF + RDA+DA +G
Sbjct: 9 IYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGY 68
Query: 68 DVDGSRIIVEFARGGPRGPGGS 89
+ DG R+ VE A GG RGP S
Sbjct: 69 NFDGCRLRVELAHGG-RGPSSS 89
>gi|41151986|ref|NP_958480.1| splicing factor, arginine/serine-rich 3b [Danio rerio]
gi|31418757|gb|AAH53132.1| Splicing factor, arginine/serine-rich 3b [Danio rerio]
gi|37681977|gb|AAQ97866.1| splicing factor, arginine/serine-rich 3 [Danio rerio]
Length = 163
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 9 CKVYVGNLGNNGNKSELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGR 68
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPP 99
+ G R+ VE + G R +R RGPPP
Sbjct: 69 TLCGCRVRVELSNGEKR----TRS---RGPPP 93
>gi|82802771|gb|ABB92436.1| RBM1 [Pan troglodytes]
gi|82802773|gb|ABB92437.1| RBM1 [Gorilla gorilla]
Length = 385
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|332809466|ref|XP_003339040.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 [Pan
troglodytes]
gi|332809468|ref|XP_003308251.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 [Pan
troglodytes]
gi|426330271|ref|XP_004026144.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 isoform 3
[Gorilla gorilla gorilla]
gi|426330273|ref|XP_004026145.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 isoform 4
[Gorilla gorilla gorilla]
Length = 391
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|82802769|gb|ABB92435.1| RBM1 [Homo sapiens]
Length = 384
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|332027347|gb|EGI67431.1| RNA-binding protein 1 [Acromyrmex echinatior]
Length = 133
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDA 57
M RY + ++YVG L S ++E FS+YG +R+V + R+ FAFVEF DPRDA
Sbjct: 1 MSRYREWDLSCKVYVGNLGSSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDA 60
Query: 58 DDARYSLNGRDVDGSRIIVEF 78
+DA L+G G+R+ VE
Sbjct: 61 EDAVRGLDGTRCCGTRVRVEM 81
>gi|297279100|ref|XP_002801676.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform
1 [Macaca mulatta]
gi|297279102|ref|XP_002801677.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform
2 [Macaca mulatta]
Length = 391
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|222623220|gb|EEE57352.1| hypothetical protein OsJ_07486 [Oryza sativa Japonica Group]
Length = 203
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 93/207 (44%), Gaps = 54/207 (26%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
R+YVG L R +R++E+ F +G +R V + R FAF++F D RDA+DA L+G+
Sbjct: 2 ARVYVGNLDPRVTAREIEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAEDAIRDLDGK 61
Query: 68 DVDGSRIIVEFARGGPRG---PGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKA----- 119
+G R+ + G RG GGS +C+ CG GH+AR+C+
Sbjct: 62 --NGWRVELSTKAGSGRGRDRSGGS-----------DMKCYECGEPGHFARECRLRIGSG 108
Query: 120 -------------------------GDWKNKCYRCGERGHIERNCQNSPKKLRPRSYSRS 154
+ G R + R+ SPK+ RSYSRS
Sbjct: 109 GLGSGRRRSRSRSRSPRYRGRSRSRSPRYRRSPSYGRRSYSPRD--RSPKR---RSYSRS 163
Query: 155 PSPRRGRSRSRSYSRGRSDSRSRSPVK 181
P P R RS SRS R S SRSP +
Sbjct: 164 PPPARARSYSRSPPPPRERSYSRSPAQ 190
>gi|148710225|gb|EDL42171.1| RNA binding motif protein, X chromosome, isoform CRA_b [Mus
musculus]
Length = 301
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|148237346|ref|NP_001084981.1| RNA-binding motif protein, X chromosome [Xenopus laevis]
gi|82236857|sp|Q6IRQ4.1|RBMX_XENLA RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G
gi|47682580|gb|AAH70649.1| MGC82187 protein [Xenopus laevis]
Length = 370
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGR+ +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFCKYGRVVEVLLMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 64 LNGRDVDGSRIIVEFA 79
LNG+ +DG I VE A
Sbjct: 69 LNGKALDGKPIKVEQA 84
>gi|395546030|ref|XP_003774897.1| PREDICTED: RNA-binding motif protein, X chromosome [Sarcophilus
harrisii]
Length = 413
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L+VG L + T + LE +F +YGRI +V + +D FAF+ F P DA DA
Sbjct: 28 KLFVGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETSKSRGFAFITFESPADAKDAARD 87
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 88 MNGKLLDGKSIKVEQA 103
>gi|149015800|gb|EDL75124.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_c [Rattus norvegicus]
Length = 289
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|149015798|gb|EDL75122.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_a [Rattus norvegicus]
Length = 306
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|5579009|emb|CAB51361.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
gi|74228065|dbj|BAE37998.1| unnamed protein product [Mus musculus]
gi|148710226|gb|EDL42172.1| RNA binding motif protein, X chromosome, isoform CRA_c [Mus
musculus]
Length = 289
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|348521764|ref|XP_003448396.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Oreochromis
niloticus]
Length = 168
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 14 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDASDAVRELDGR 73
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGR 103
+ G R+ VE + G R SR RGPPP R
Sbjct: 74 TMCGCRVRVELSTGEKR----SRS---RGPPPSWSR 102
>gi|82802779|gb|ABB92440.1| RBM1 [Chlorocebus sabaeus]
Length = 385
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|321469412|gb|EFX80392.1| hypothetical protein DAPPUDRAFT_51367 [Daphnia pulex]
Length = 120
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + T DLE FS+YG +++V + R+ FAFVE+ DPRDA+DA +++G
Sbjct: 11 CKVYVGNLGNNTARGDLEASFSKYGALKNVWVARNPPGFAFVEYEDPRDAEDAVRAMDGS 70
Query: 68 DVDGSRIIVEFARG 81
+ GSR+ VE + G
Sbjct: 71 RICGSRVRVEMSSG 84
>gi|21361809|ref|NP_062556.2| RNA binding motif protein, X-linked-like-1 [Homo sapiens]
gi|242117971|ref|NP_001156008.1| RNA binding motif protein, X-linked-like-1 [Homo sapiens]
gi|74760797|sp|Q96E39.1|RMXL1_HUMAN RecName: Full=RNA binding motif protein, X-linked-like-1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
G-like 1; Contains: RecName: Full=RNA binding motif
protein, X-linked-like-1, N-terminally processed
gi|15277908|gb|AAH12942.1| Cysteine conjugate-beta lyase 2 [Homo sapiens]
gi|57997143|emb|CAI46148.1| hypothetical protein [Homo sapiens]
gi|119593561|gb|EAW73155.1| hCG23341, isoform CRA_b [Homo sapiens]
gi|119593562|gb|EAW73156.1| hCG23341, isoform CRA_b [Homo sapiens]
gi|208967733|dbj|BAG72512.1| cysteine conjugate-beta lyase 2 [synthetic construct]
Length = 390
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|297847776|ref|XP_002891769.1| hypothetical protein ARALYDRAFT_474506 [Arabidopsis lyrata subsp.
lyrata]
gi|297337611|gb|EFH68028.1| hypothetical protein ARALYDRAFT_474506 [Arabidopsis lyrata subsp.
lyrata]
Length = 508
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDF--------AFVEFSDPRDADDARYSL 64
L+V +L T DL IFSR+G + D+ RDF AF+EF + + A + +
Sbjct: 245 LFVCKLNPVTEDEDLHTIFSRFGTVVSADVIRDFKTGDSLCYAFIEFENKEACEQAYFKM 304
Query: 65 NGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGR-CFNCGIDGHWARDCKAGD 121
+ +D RI V+F++ + R+ + G G CF CG H A+DC G+
Sbjct: 305 DNALIDDRRIHVDFSQSVSKLWSQFRQ---KDSQKGKGNGCFKCGSTDHIAKDCVGGN 359
>gi|167515992|ref|XP_001742337.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778961|gb|EDQ92575.1| predicted protein [Monosiga brevicollis MX1]
Length = 164
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%)
Query: 9 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRD 68
G R+YVG L R R+L+E+F +YGRI D+ +K +AFV F D RDA+DA + +G +
Sbjct: 4 GSRRVYVGNLPRDIRERELDELFYKYGRILDIHIKGPYAFVTFEDERDAEDAVHGRDGIN 63
Query: 69 VDGSRIIVEFARGGPRGP 86
G R+ VE + G RG
Sbjct: 64 FAGGRLRVELSNPGRRGA 81
>gi|380811822|gb|AFE77786.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383417591|gb|AFH32009.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
Length = 289
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|4104336|gb|AAD01997.1| heterogeneous nuclear ribonucleoprotein G [Macropus eugenii]
Length = 394
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L+VG L + T + LE +F +YGRI +V + +D FAF+ F P DA DA
Sbjct: 9 KLFVGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETSKSRGFAFITFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKLLDGKSIKVEQA 84
>gi|296236539|ref|XP_002763369.1| PREDICTED: RNA-binding motif protein, X chromosome [Callithrix
jacchus]
Length = 289
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|312384272|gb|EFR29035.1| hypothetical protein AND_02328 [Anopheles darlingi]
Length = 556
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNG 66
GTR+YVG L + + DLE F++YG++ V + + FAF+EF + +A+ A +LNG
Sbjct: 6 GTRVYVGNLTDKVKKEDLEGEFTKYGKLNSVWVAFNPPGFAFIEFENKDEAETACDNLNG 65
Query: 67 RDVDGSRIIVEFARG--GPRGP 86
+D+ GS++ VE ++G PRG
Sbjct: 66 QDILGSKLRVEISKGRRNPRGA 87
>gi|297840491|ref|XP_002888127.1| hypothetical protein ARALYDRAFT_315285 [Arabidopsis lyrata subsp.
lyrata]
gi|297333968|gb|EFH64386.1| hypothetical protein ARALYDRAFT_315285 [Arabidopsis lyrata subsp.
lyrata]
Length = 286
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 16/129 (12%)
Query: 3 RYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMK--------RDFAFVEFSDP 54
R +DR +R++VG L+ R LE F RYG+I + + R F F+ F+D
Sbjct: 4 RENDRNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGKDTGRPRGFGFITFTDR 63
Query: 55 RDADDARYSLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS------GRCFNCG 108
R AD+A ++GR++ G R+I + P+ G ++L +G S CF C
Sbjct: 64 RGADEAIKHMHGREL-GDRVI-SVNKAEPKVGGDDVDHLQKGGGYSSRGKGSEDECFKCR 121
Query: 109 IDGHWARDC 117
GHWARDC
Sbjct: 122 RPGHWARDC 130
>gi|358059659|dbj|GAA94591.1| hypothetical protein E5Q_01243 [Mixia osmundae IAM 14324]
Length = 294
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
++Y+G L T + DL++ F + G + V++K + FVEF + A DA N
Sbjct: 24 NKIYIGGLPESTTTEDLQDCFGQIGPVITVELKSGYGFVEFGTEQHALDAVSKYNDGHFL 83
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
G++I VE + + P ++ G G CF CG HWAR+C
Sbjct: 84 GAQIKVEVS----KRPRFRQQENGLG-------CFKCGETSHWAREC 119
>gi|229367606|gb|ACQ58783.1| Heterogeneous nuclear ribonucleoprotein G [Anoplopoma fimbria]
Length = 289
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 14/89 (15%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE+ FS+YG I +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETTEKALEQYFSKYGGIVEVILMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 64 LNGRDVDGSRIIVE------FARGGPRGP 86
+NG+ +DG I VE F G RGP
Sbjct: 69 MNGKSLDGKPIKVEQATKPQFESAGRRGP 97
>gi|342326382|gb|AEL23106.1| hnRNP protein [Cherax quadricarinatus]
Length = 284
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 48/71 (67%)
Query: 14 YVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGSR 73
YVG L+ R RDL+ F YGR+RD+ +K F FVEF D RDADDA Y +NG+++ G R
Sbjct: 1 YVGGLSYRVGERDLDRFFRSYGRLRDIVIKNGFGFVEFDDDRDADDAVYEMNGKELLGGR 60
Query: 74 IIVEFARGGPR 84
+ VE AR PR
Sbjct: 61 VTVEKARAAPR 71
>gi|431891348|gb|ELK02224.1| Heterogeneous nuclear ribonucleoprotein G [Pteropus alecto]
Length = 278
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI +V + +D FAFV F P DA DA
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|18406831|ref|NP_564759.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|30696446|ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|2462758|gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|21593771|gb|AAM65738.1| RNA binding protein, putative [Arabidopsis thaliana]
gi|26983818|gb|AAN86161.1| putative glycine-rich RNA binding protein [Arabidopsis thaliana]
gi|62321068|dbj|BAD94150.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332195593|gb|AEE33714.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332195594|gb|AEE33715.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 292
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 58/121 (47%), Gaps = 16/121 (13%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRI--------RDVDMKRDFAFVEFSDPRDADDARY 62
+R++VG L+ R LE F RYG+I RD R F F+ F+D R ADDA
Sbjct: 12 SRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAIK 71
Query: 63 SLNGRDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGS------GRCFNCGIDGHWARD 116
++GR++ I V A P+ G + L +G S CF C GHWARD
Sbjct: 72 HMHGRELGNKVISVNKAE--PKVGGEDVDQLKKGGGYSSRGKGTEDECFKCRRPGHWARD 129
Query: 117 C 117
C
Sbjct: 130 C 130
>gi|389748594|gb|EIM89771.1| hypothetical protein STEHIDRAFT_128672 [Stereum hirsutum FP-91666
SS1]
Length = 276
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
RLY+GRL + R+ D+ + F YG+I D + F FVEF RDA+DA NG+ G
Sbjct: 4 RLYLGRLPTDARTDDVSKFFEGYGKIVDCRVMTGFGFVEFESSRDAEDALNHFNGKPFMG 63
Query: 72 SRIIVEFAR 80
+ ++VEFA+
Sbjct: 64 TNLVVEFAK 72
>gi|390336105|ref|XP_003724280.1| PREDICTED: serine/arginine-rich splicing factor 1-like
[Strongylocentrotus purpuratus]
Length = 299
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 18/88 (20%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD------------------FAFVEFSD 53
R+YVG L R +D+E++F ++G + D+D+K FAFVEF D
Sbjct: 17 RIYVGNLPPDIREKDIEDMFYKFGSVADIDLKNKRPPSFSSSGSERERFGTPFAFVEFYD 76
Query: 54 PRDADDARYSLNGRDVDGSRIIVEFARG 81
RDADDA + +G + DG RI VEF RG
Sbjct: 77 RRDADDAVLARDGYNYDGYRIRVEFPRG 104
>gi|198430457|ref|XP_002119659.1| PREDICTED: similar to splicing factor, arginine/serine-rich 3
[Ciona intestinalis]
Length = 185
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGRD 68
++YVG L S+ +LE +F YG +++V + R+ FAFVEF D RDA+DA +L+GR
Sbjct: 12 KVYVGNLGSQGSKNELERVFGYYGALKNVWVARNPPGFAFVEFEDNRDAEDAVRALDGRT 71
Query: 69 VDGSRIIVEFARGGPR 84
V G R VE + G R
Sbjct: 72 VCGVRARVEMSSGQSR 87
>gi|195401867|ref|XP_002059532.1| GJ14774 [Drosophila virilis]
gi|194147239|gb|EDW62954.1| GJ14774 [Drosophila virilis]
Length = 155
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDA 57
MPRY + ++YVG L S ++E FS+YG +R+V + R+ FAFVEF D RDA
Sbjct: 1 MPRYREWDLACKVYVGNLGSSASKHEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDA 60
Query: 58 DDARYSLNGRDVDGSRIIVEF 78
+DA L+G G+RI VE
Sbjct: 61 EDATRGLDGTRCCGTRIRVEM 81
>gi|224132592|ref|XP_002321360.1| predicted protein [Populus trichocarpa]
gi|222868356|gb|EEF05487.1| predicted protein [Populus trichocarpa]
Length = 240
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 6/79 (7%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGR 67
+YVG L + R ++E++F +YGRI DV++K + FVEF + RDA+DA +G
Sbjct: 9 IYVGNLPADIRESEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAEDAIRGRDGY 68
Query: 68 DVDGSRIIVEFARGGPRGP 86
+ DG R+ VE A GG RGP
Sbjct: 69 NFDGCRLRVELAHGG-RGP 86
>gi|167378049|ref|XP_001734650.1| splicing factor, arginine/serine-rich [Entamoeba dispar SAW760]
gi|165903770|gb|EDR29203.1| splicing factor, arginine/serine-rich, putative [Entamoeba dispar
SAW760]
Length = 222
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 14/107 (13%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVD 70
+LYVG L +++++FS+YG I +D+K F FV F++ D +
Sbjct: 4 IKLYVGHLPDGVTQAEMKDVFSKYGSIETIDIKSHFGFVTFTNAEDGKKIIDDKIDITIK 63
Query: 71 GSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDC 117
G + VE ARG SRE + C+ CG GHWARDC
Sbjct: 64 GRHVSVEQARGDR-----SRE---------NDVCYLCGKTGHWARDC 96
>gi|50344760|ref|NP_001002053.1| splicing factor, arginine/serine-rich 3 [Danio rerio]
gi|47940341|gb|AAH71322.1| Splicing factor, arginine/serine-rich 3a [Danio rerio]
Length = 174
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 14 CKVYVGNLGNSGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGR 73
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPP 99
+ G R+ VE + G R SR RGPPP
Sbjct: 74 TLCGCRVRVEMSNGEKR----SRF---RGPPP 98
>gi|270000727|gb|EEZ97174.1| hypothetical protein TcasGA2_TC004361 [Tribolium castaneum]
Length = 123
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDA 57
M RY + ++YVG L S ++E FS+YG +R+V + R+ FAFVEF DPRDA
Sbjct: 1 MSRYREWDLSCKVYVGNLGSSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDA 60
Query: 58 DDARYSLNGRDVDGSRIIVEFA 79
+DA L+G G+R+ VE +
Sbjct: 61 EDAVRGLDGTRCCGTRVRVEMS 82
>gi|55824572|gb|AAV66406.1| splicing factor arginine/serine-rich protein 5 [Macaca
fascicularis]
Length = 208
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 35/44 (79%)
Query: 34 YGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVE 77
YGRIRD+D+KR F FVEF DPRDADDA Y L+G+++ R+ +E
Sbjct: 3 YGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCSERVTIE 46
>gi|157823451|ref|NP_001100890.1| RNA-binding motif protein, X chromosome retrogene-like [Rattus
norvegicus]
gi|71152131|sp|P84586.1|RMXRL_RAT RecName: Full=RNA-binding motif protein, X chromosome
retrogene-like; AltName: Full=Heterogeneous nuclear
ribonucleoprotein G retrogene-like; Short=hnRNP G;
AltName: Full=RNA-binding motif protein, X chromosome
retrogene; Contains: RecName: Full=RNA-binding motif
protein, X chromosome retrogene-like, N-terminally
processed
gi|149037963|gb|EDL92323.1| RNA binding motif protein, X chromosome retrogene (predicted)
[Rattus norvegicus]
Length = 388
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI ++ + +D FAFV F P DA D
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|72012128|ref|XP_784623.1| PREDICTED: uncharacterized protein LOC579411 [Strongylocentrotus
purpuratus]
Length = 341
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 5 DDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDAR 61
D +GG RL+VG + +R DLE F RYG I DV + R+ FAFV + DAD A
Sbjct: 6 DRAFGGYRLFVGDIGTRVGKNDLEREFDRYGPITDVWVARNPPGFAFVVYMYREDADKAV 65
Query: 62 YSLNGRDVDGSRIIVEFARGGPRGP 86
SL+GR + G R+ VE AR P P
Sbjct: 66 RSLDGRLMCGRRVRVEHARPYPGVP 90
>gi|148684205|gb|EDL16152.1| mCG21910 [Mus musculus]
Length = 163
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 9 CKVYVGNLGNNGNKTELEWAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 68
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 102
+ G R+ VE + G R SR RG PP G
Sbjct: 69 TLCGCRVRVELSNGEKR----SRN---RGLPPSWG 96
>gi|452820198|gb|EME27244.1| splice factor, putative isoform 1 [Galdieria sulphuraria]
Length = 388
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 13 LYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGS 72
L+VG ++S R+L+++F +YG+ R +D+KR F FV++ + +A DA SL G+ V G
Sbjct: 3 LFVGNVSSSVSKRELQDLFEKYGKCR-IDLKRGFMFVDYDEEAEAKDALESLQGKQVGGL 61
Query: 73 RIIVEFAR 80
+I VE++R
Sbjct: 62 KINVEWSR 69
>gi|387916036|gb|AFK11627.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 168
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 14 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDASDAVRELDGR 73
Query: 68 DVDGSRIIVEFARG 81
+ G R+ VE + G
Sbjct: 74 SLCGCRVRVELSNG 87
>gi|290561220|gb|ADD38012.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 152
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDA 57
M R+ D ++Y+G L + +LE+ FS+YG +++V + R+ FAFVEF DPRDA
Sbjct: 1 MSRHRDWDISCKVYIGNLGNSASKYELEDAFSKYGPLKNVWVARNPPGFAFVEFEDPRDA 60
Query: 58 DDARYSLNGRDVDGSRIIVEFARGGPR 84
+D+ L+G V G R+ VE + G R
Sbjct: 61 EDSVRGLDGTRVCGQRVRVEMSSGQSR 87
>gi|293346666|ref|XP_002726404.1| PREDICTED: RNA binding motif protein, X-linked-like 1 [Rattus
norvegicus]
Length = 441
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI ++ + +D FAFV F P DA D
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|115447241|ref|NP_001047400.1| Os02g0610600 [Oryza sativa Japonica Group]
gi|75324099|sp|Q6K9C3.1|RZP23_ORYSJ RecName: Full=Serine/arginine-rich splicing factor RSZ23; AltName:
Full=RS-containing zinc finger protein 23;
Short=Os-RSZ23; Short=Os-RSZp23
gi|47497180|dbj|BAD19227.1| putative splicing factor RSZp22 (RSZP22) [Oryza sativa Japonica
Group]
gi|113536931|dbj|BAF09314.1| Os02g0610600 [Oryza sativa Japonica Group]
gi|215704568|dbj|BAG94201.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737778|dbj|BAG96908.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765616|dbj|BAG87313.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 200
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 19/114 (16%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
R+YVG L R +R++E+ F +G +R V + R FAF++F D RDA+DA L+G+
Sbjct: 2 ARVYVGNLDPRVTAREIEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAEDAIRDLDGK 61
Query: 68 DVDGSRIIVEFARGGPRG---PGGSREYLGRGPPPGSGRCFNCGIDGHWARDCK 118
+G R+ + G RG GGS +C+ CG GH+AR+C+
Sbjct: 62 --NGWRVELSTKAGSGRGRDRSGGS-----------DMKCYECGEPGHFARECR 102
>gi|91094467|ref|XP_976127.1| PREDICTED: similar to AGAP007325-PA isoform 5 [Tribolium
castaneum]
Length = 111
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDA 57
M RY + ++YVG L S ++E FS+YG +R+V + R+ FAFVEF DPRDA
Sbjct: 1 MSRYREWDLSCKVYVGNLGSSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDA 60
Query: 58 DDARYSLNGRDVDGSRIIVEFA 79
+DA L+G G+R+ VE +
Sbjct: 61 EDAVRGLDGTRCCGTRVRVEMS 82
>gi|391331353|ref|XP_003740112.1| PREDICTED: uncharacterized protein LOC100903643 [Metaseiulus
occidentalis]
Length = 162
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++Y+G LA+ T D+E F +YG +R+V + R+ FAFVEF D RDA+DA +L+G
Sbjct: 10 CKVYIGNLANHTSRHDIESAFGKYGNLRNVWVARNPPGFAFVEFEDSRDAEDAVRALDGS 69
Query: 68 DVDGSRIIVEFAR 80
+ GSR+ E +
Sbjct: 70 RICGSRVKCEMSH 82
>gi|145525601|ref|XP_001448617.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416172|emb|CAK81220.1| unnamed protein product [Paramecium tetraurelia]
Length = 192
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 22 TRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFARG 81
T RD++EIF +Y +++V K ++FV F+ +A +A NG +G ++ V+
Sbjct: 20 TDERDVKEIFRKYASVKEVAYKGSYSFVTFNSETEAQEALKETNGMTYNGQKLKVDIVDN 79
Query: 82 GPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 120
G P S CF C GHWARDC G
Sbjct: 80 RKSRKTG---------PSDSDLCFKCSKGGHWARDCPNG 109
>gi|91094459|ref|XP_967049.1| PREDICTED: similar to AGAP007325-PA isoform 1 [Tribolium
castaneum]
Length = 129
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 1 MPRYDDRYGGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDA 57
M RY + ++YVG L S ++E FS+YG +R+V + R+ FAFVEF DPRDA
Sbjct: 1 MSRYREWDLSCKVYVGNLGSSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDA 60
Query: 58 DDARYSLNGRDVDGSRIIVEFA 79
+DA L+G G+R+ VE +
Sbjct: 61 EDAVRGLDGTRCCGTRVRVEMS 82
>gi|355748508|gb|EHH52991.1| hypothetical protein EGM_13542 [Macaca fascicularis]
Length = 164
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++ VG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 10 CKVCVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 102
+ G R+ VE + G R SR RGPPP G
Sbjct: 70 TLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|242092260|ref|XP_002436620.1| hypothetical protein SORBIDRAFT_10g005960 [Sorghum bicolor]
gi|241914843|gb|EER87987.1| hypothetical protein SORBIDRAFT_10g005960 [Sorghum bicolor]
gi|448878284|gb|AGE46105.1| arginine/serine-rich splicing factor RSZ21 transcript I [Sorghum
bicolor]
gi|448878288|gb|AGE46107.1| arginine/serine-rich splicing factor RSZ21 transcript III [Sorghum
bicolor]
Length = 186
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 59/111 (53%), Gaps = 12/111 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
RLYVG L R +R+LE+ F +G +R V + R FAF++F D RDA+DA L+G+
Sbjct: 2 ARLYVGNLDPRVTARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRDLDGK 61
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCK 118
+G R VE +R S +C+ CG GH+AR+C+
Sbjct: 62 --NGWR--VELSRN-----ASSGRGGRDRYGGSESKCYECGETGHFARECR 103
>gi|393245625|gb|EJD53135.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 265
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDG 71
RLY+GR+ + RS D+++ F YGRI D + F FVEF +DA++ NG+ G
Sbjct: 4 RLYLGRIPTDARSEDVQKFFEGYGRIVDCRVMTGFGFVEFESSKDAEEVVQVFNGKAFMG 63
Query: 72 SRIIVEFAR 80
+ I+VEFA+
Sbjct: 64 APILVEFAK 72
>gi|374253685|sp|D4AE41.1|RMXL1_RAT RecName: Full=RNA binding motif protein, X-linked-like-1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
G-like 1; Contains: RecName: Full=RNA binding motif
protein, X-linked-like-1, N-terminally processed
Length = 388
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI ++ + +D FAFV F P DA D
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|392877166|gb|AFM87415.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 164
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDASDAVRELDGR 69
Query: 68 DVDGSRIIVEFARG 81
+ G R+ VE + G
Sbjct: 70 SLCGCRVRVELSNG 83
>gi|148228480|ref|NP_001085252.1| serine/arginine-rich splicing factor 5 [Xenopus laevis]
gi|47717981|gb|AAH70967.1| MGC78772 protein [Xenopus laevis]
Length = 157
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 49/70 (70%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R+++GRL R +D+E F YGRIRD+D+KR F FVEF D RDADDA Y L+G+++
Sbjct: 3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDARDADDAVYELDGKEL 62
Query: 70 DGSRIIVEFA 79
R+ +E A
Sbjct: 63 CNERVTIEHA 72
>gi|392879762|gb|AFM88713.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 164
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F YG +R V + R+ FAFVEF DPRDA DA L+GR
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDASDAVRELDGR 69
Query: 68 DVDGSRIIVEFARG 81
+ G R+ VE + G
Sbjct: 70 SLCGCRVRVELSNG 83
>gi|300123677|emb|CBK24949.2| unnamed protein product [Blastocystis hominis]
Length = 325
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMK-----RDFAFVEFSDPRDADDARYSLNG 66
RLYVG L + DL ++F ++G I D+ +K +AFVEFS +AD+A+ SLN
Sbjct: 4 RLYVGNLEYGVENDDLSKLFGQFGEITDIAIKDRGQGAVYAFVEFSKEEEADNAQSSLNS 63
Query: 67 RDVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKC 126
G I VE+ RG G S + RGPP + H +C D K+
Sbjct: 64 THFMGRDIRVEYTRGLRYSTGDS---IRRGPPRRTDYRIEV---THLPHNCSWQDLKDYM 117
Query: 127 YRCGERGH 134
R G G+
Sbjct: 118 SRIGPVGY 125
>gi|170035265|ref|XP_001845491.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877141|gb|EDS40524.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 197
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNG 66
GTR+YVG L + + DLE F++YG++ V + + FAF+EF + +A+ A +LNG
Sbjct: 6 GTRVYVGNLTDKVKKEDLEGEFTKYGKLNSVWVAFNPPGFAFIEFENKEEAESACDNLNG 65
Query: 67 RDVDGSRIIVEFAR 80
+D+ GS++ VE ++
Sbjct: 66 QDILGSKLRVEISK 79
>gi|156402923|ref|XP_001639839.1| predicted protein [Nematostella vectensis]
gi|156226970|gb|EDO47776.1| predicted protein [Nematostella vectensis]
Length = 185
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 50/71 (70%)
Query: 10 GTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDV 69
G R++VGRL R RDLE+ F +GRI D+++K+ FAFVEF D RDADDA Y LN +++
Sbjct: 5 GGRVFVGRLPPRANDRDLEKFFKGFGRINDINLKQGFAFVEFDDARDADDAVYELNHKEL 64
Query: 70 DGSRIIVEFAR 80
G R+ VE A
Sbjct: 65 LGERVSVEHAH 75
>gi|402869670|ref|XP_003898873.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Papio
anubis]
Length = 164
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD---FAFVEFSDPRDADDARYSLNGR 67
++YVG L + +LE F YG +R V + R+ FAF+EF DP DA DA L+GR
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFIEFEDPPDAADAVRELDGR 69
Query: 68 DVDGSRIIVEFARGGPRGPGGSREYLGRGPPPGSG 102
+ G R+ VE + G R SR RGPPP G
Sbjct: 70 TLCGCRVRVELSNGEKR----SRN---RGPPPSWG 97
>gi|126325323|ref|XP_001367196.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Monodelphis domestica]
Length = 388
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L+VG L T + LE +F +YGRI +V + +D FAF+ F P DA DA
Sbjct: 9 KLFVGGLNIETNEKALEAVFGKYGRIVEVLLMKDRETRKSRGFAFITFESPADAKDAARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKLLDGKSIKVEQA 84
>gi|392347178|ref|XP_003749751.1| PREDICTED: RNA binding motif protein, X-linked-like 1 [Rattus
norvegicus]
Length = 446
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 12 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD--------FAFVEFSDPRDADDARYS 63
+L++G L + T + LE +F +YGRI ++ + +D FAFV F P DA D
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARD 68
Query: 64 LNGRDVDGSRIIVEFA 79
+NG+ +DG I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|147903707|ref|NP_001088237.1| serine/arginine-rich splicing factor 12 [Xenopus laevis]
gi|54038377|gb|AAH84231.1| LOC495068 protein [Xenopus laevis]
Length = 251
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 11 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDF--------AFVEFSDPRDADDARY 62
T L+V + TR DL F RYG I DV + DF A+++F D RDA+DA Y
Sbjct: 10 TSLFVRNVGDATRPEDLRREFGRYGPIVDVYVPLDFYNRRPRGFAYIQFEDVRDAEDALY 69
Query: 63 SLNGRDVDGSRIIVEFARGGPRGPG 87
+LN + V G +I ++FA+G + PG
Sbjct: 70 NLNRKWVCGRQIEIQFAQGDRKTPG 94
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.135 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,886,984,983
Number of Sequences: 23463169
Number of extensions: 309098467
Number of successful extensions: 1843849
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9556
Number of HSP's successfully gapped in prelim test: 51545
Number of HSP's that attempted gapping in prelim test: 1323491
Number of HSP's gapped (non-prelim): 283933
length of query: 309
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 167
effective length of database: 9,027,425,369
effective search space: 1507580036623
effective search space used: 1507580036623
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 76 (33.9 bits)