Query 021646
Match_columns 309
No_of_seqs 117 out of 1141
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 07:10:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021646.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021646hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 7mdh_A Protein (malate dehydro 100.0 1.1E-74 3.9E-79 545.7 33.1 304 2-309 52-357 (375)
2 4h7p_A Malate dehydrogenase; s 100.0 2.5E-72 8.6E-77 526.5 30.2 299 1-304 43-343 (345)
3 5mdh_A Malate dehydrogenase; o 100.0 3.3E-72 1.1E-76 524.8 30.5 305 2-309 23-331 (333)
4 4aj2_A L-lactate dehydrogenase 100.0 9E-67 3.1E-71 486.9 28.2 275 11-301 42-326 (331)
5 3vku_A L-LDH, L-lactate dehydr 100.0 1.5E-67 5.2E-72 491.2 22.6 276 15-305 36-317 (326)
6 3nep_X Malate dehydrogenase; h 100.0 5E-67 1.7E-71 485.9 24.6 280 15-309 27-309 (314)
7 3pqe_A L-LDH, L-lactate dehydr 100.0 4E-66 1.4E-70 482.2 26.3 275 15-303 32-312 (326)
8 2x0j_A Malate dehydrogenase; o 100.0 7E-66 2.4E-70 473.4 27.0 262 15-303 27-291 (294)
9 3p7m_A Malate dehydrogenase; p 100.0 9.3E-64 3.2E-68 465.7 29.8 281 15-309 31-320 (321)
10 3tl2_A Malate dehydrogenase; c 100.0 5.6E-64 1.9E-68 465.8 26.5 274 15-303 34-313 (315)
11 1oju_A MDH, malate dehydrogena 100.0 5.5E-63 1.9E-67 455.1 29.7 261 15-303 27-291 (294)
12 3fi9_A Malate dehydrogenase; s 100.0 2.7E-63 9.4E-68 465.5 22.7 274 15-306 36-319 (343)
13 3gvi_A Malate dehydrogenase; N 100.0 2E-62 6.7E-67 456.9 27.0 277 15-306 33-318 (324)
14 1b8p_A Protein (malate dehydro 100.0 1.6E-60 5.4E-65 446.1 33.2 302 2-308 25-328 (329)
15 1ez4_A Lactate dehydrogenase; 100.0 2.9E-61 1E-65 448.7 27.5 281 14-309 31-316 (318)
16 2zqz_A L-LDH, L-lactate dehydr 100.0 7E-61 2.4E-65 447.5 28.5 281 14-309 35-321 (326)
17 2d4a_B Malate dehydrogenase; a 100.0 1.4E-60 4.8E-65 442.4 25.1 278 15-308 25-306 (308)
18 2xxj_A L-LDH, L-lactate dehydr 100.0 6.9E-60 2.3E-64 438.2 28.9 275 15-304 27-308 (310)
19 3ldh_A Lactate dehydrogenase; 100.0 2.5E-61 8.7E-66 448.8 15.1 259 15-303 48-327 (330)
20 3hhp_A Malate dehydrogenase; M 100.0 7.5E-59 2.6E-63 430.7 31.0 271 13-309 27-311 (312)
21 3d0o_A L-LDH 1, L-lactate dehy 100.0 7E-59 2.4E-63 432.8 28.7 278 14-305 32-314 (317)
22 1y6j_A L-lactate dehydrogenase 100.0 1.4E-58 4.9E-63 430.8 29.0 276 15-305 34-316 (318)
23 1o6z_A MDH, malate dehydrogena 100.0 2E-57 6.9E-62 420.5 29.8 274 14-304 27-302 (303)
24 1ldn_A L-lactate dehydrogenase 100.0 5.8E-57 2E-61 419.7 29.2 276 15-304 33-314 (316)
25 1ur5_A Malate dehydrogenase; o 100.0 3.9E-57 1.3E-61 419.6 25.6 274 15-305 28-307 (309)
26 1hye_A L-lactate/malate dehydr 100.0 1.8E-55 6.3E-60 409.1 27.8 278 13-305 26-311 (313)
27 1t2d_A LDH-P, L-lactate dehydr 100.0 5.5E-55 1.9E-59 407.2 25.9 274 15-304 30-316 (322)
28 2i6t_A Ubiquitin-conjugating e 100.0 9.6E-54 3.3E-58 395.4 27.7 258 15-304 41-301 (303)
29 1guz_A Malate dehydrogenase; o 100.0 1.2E-53 4.2E-58 396.3 27.4 276 14-306 26-307 (310)
30 2hjr_A Malate dehydrogenase; m 100.0 1.7E-53 5.8E-58 398.2 26.8 275 15-305 40-324 (328)
31 2v6b_A L-LDH, L-lactate dehydr 100.0 3.9E-53 1.3E-57 392.0 26.7 269 15-304 27-302 (304)
32 1pzg_A LDH, lactate dehydrogen 100.0 8.3E-53 2.8E-57 394.0 29.1 277 15-306 35-326 (331)
33 1mld_A Malate dehydrogenase; o 100.0 6.3E-51 2.2E-55 378.6 28.1 272 13-309 26-311 (314)
34 1a5z_A L-lactate dehydrogenase 100.0 3.9E-50 1.4E-54 374.2 31.9 276 15-305 27-308 (319)
35 1y7t_A Malate dehydrogenase; N 100.0 4.1E-49 1.4E-53 368.3 33.1 298 5-307 27-324 (327)
36 1smk_A Malate dehydrogenase, g 100.0 2.9E-48 9.9E-53 362.5 29.2 269 14-308 35-318 (326)
37 1hyh_A L-hicdh, L-2-hydroxyiso 100.0 3.3E-47 1.1E-51 352.8 27.4 275 14-308 27-309 (309)
38 2ewd_A Lactate dehydrogenase,; 100.0 2.5E-46 8.4E-51 348.2 27.8 276 15-305 30-314 (317)
39 1lld_A L-lactate dehydrogenase 100.0 1.4E-39 4.8E-44 302.0 32.0 275 15-304 34-317 (319)
40 1up7_A 6-phospho-beta-glucosid 100.0 1.7E-39 5.9E-44 311.6 24.0 275 14-306 32-377 (417)
41 1s6y_A 6-phospho-beta-glucosid 100.0 2.2E-38 7.6E-43 306.6 21.5 280 14-305 37-399 (450)
42 1u8x_X Maltose-6'-phosphate gl 100.0 6.4E-36 2.2E-40 290.7 18.2 278 14-305 58-423 (472)
43 3fef_A Putative glucosidase LP 99.9 3.6E-25 1.2E-29 213.6 23.6 267 15-305 35-404 (450)
44 1obb_A Maltase, alpha-glucosid 99.9 1.3E-21 4.5E-26 190.1 20.8 275 14-304 33-433 (480)
45 3u95_A Glycoside hydrolase, fa 99.8 6.4E-19 2.2E-23 171.6 18.4 153 13-175 31-219 (477)
46 3g79_A NDP-N-acetyl-D-galactos 90.9 0.68 2.3E-05 44.6 8.4 87 15-108 45-147 (478)
47 3gg2_A Sugar dehydrogenase, UD 85.4 2.5 8.5E-05 40.2 8.3 58 45-108 65-122 (450)
48 2o3j_A UDP-glucose 6-dehydroge 84.0 2.9 0.0001 40.0 8.2 67 46-113 74-141 (481)
49 1dlj_A UDP-glucose dehydrogena 80.9 3.2 0.00011 38.7 7.0 70 46-121 61-131 (402)
50 1mv8_A GMD, GDP-mannose 6-dehy 79.0 9.4 0.00032 35.8 9.7 62 46-113 64-129 (436)
51 4e12_A Diketoreductase; oxidor 74.2 4.4 0.00015 35.6 5.6 52 46-111 73-124 (283)
52 2y0c_A BCEC, UDP-glucose dehyd 70.5 6.2 0.00021 37.7 6.0 57 46-108 72-128 (478)
53 4a7p_A UDP-glucose dehydrogena 69.4 17 0.00057 34.4 8.7 59 45-108 71-129 (446)
54 3k96_A Glycerol-3-phosphate de 64.8 19 0.00065 32.8 7.9 61 45-121 86-150 (356)
55 1zcj_A Peroxisomal bifunctiona 63.8 35 0.0012 32.2 9.8 41 52-106 108-148 (463)
56 3pid_A UDP-glucose 6-dehydroge 61.1 13 0.00046 35.0 6.2 71 45-121 96-167 (432)
57 3ado_A Lambda-crystallin; L-gu 61.0 3.8 0.00013 37.2 2.3 90 45-150 74-180 (319)
58 3k6j_A Protein F01G10.3, confi 59.2 23 0.0008 33.6 7.5 49 45-108 118-166 (460)
59 1f0y_A HCDH, L-3-hydroxyacyl-C 56.9 13 0.00046 32.6 5.2 53 45-111 87-139 (302)
60 2wtb_A MFP2, fatty acid multif 55.4 19 0.00067 36.2 6.6 48 45-109 379-426 (725)
61 3tri_A Pyrroline-5-carboxylate 53.6 24 0.00083 30.7 6.3 72 14-112 30-102 (280)
62 3vtf_A UDP-glucose 6-dehydroge 53.4 49 0.0017 31.2 8.7 73 45-121 84-162 (444)
63 3gt0_A Pyrroline-5-carboxylate 53.2 17 0.00057 30.9 5.0 71 15-112 31-101 (247)
64 2q3e_A UDP-glucose 6-dehydroge 52.8 34 0.0012 32.2 7.6 68 45-113 69-137 (467)
65 2i9x_A Putative septation prot 51.4 13 0.00046 26.9 3.4 35 259-294 44-79 (87)
66 3ldh_A Lactate dehydrogenase; 49.6 0.51 1.8E-05 43.2 -5.6 16 105-120 234-249 (330)
67 3mog_A Probable 3-hydroxybutyr 48.7 45 0.0016 31.7 7.7 49 45-108 72-120 (483)
68 3e8x_A Putative NAD-dependent 48.3 50 0.0017 27.2 7.3 56 50-109 76-131 (236)
69 1x0v_A GPD-C, GPDH-C, glycerol 48.3 55 0.0019 29.0 8.0 51 45-111 77-127 (354)
70 2dpo_A L-gulonate 3-dehydrogen 47.9 24 0.00083 31.6 5.4 50 45-108 74-123 (319)
71 4h08_A Putative hydrolase; GDS 47.3 45 0.0015 26.6 6.6 49 57-111 73-122 (200)
72 2rcy_A Pyrroline carboxylate r 44.6 31 0.0011 29.2 5.4 51 46-113 46-96 (262)
73 3d1l_A Putative NADP oxidoredu 43.2 87 0.003 26.4 8.1 46 48-109 58-103 (266)
74 2i9z_A Putative septation prot 42.6 21 0.00072 26.8 3.4 35 259-294 44-79 (105)
75 1yj8_A Glycerol-3-phosphate de 42.1 53 0.0018 29.7 6.8 50 45-110 90-143 (375)
76 2ia9_A Putative septation prot 40.3 24 0.00081 26.3 3.3 35 259-294 44-79 (100)
77 4fgw_A Glycerol-3-phosphate de 39.1 31 0.001 32.1 4.7 50 43-108 102-151 (391)
78 2x41_A Beta-glucosidase; hydro 37.8 11 0.00036 38.2 1.4 58 55-113 441-505 (721)
79 4huj_A Uncharacterized protein 37.8 24 0.00081 29.5 3.4 69 15-112 48-117 (220)
80 3pef_A 6-phosphogluconate dehy 37.5 47 0.0016 28.7 5.5 41 15-67 26-66 (287)
81 3oj0_A Glutr, glutamyl-tRNA re 37.0 40 0.0014 25.7 4.5 70 15-113 46-115 (144)
82 1bb1_B Designed, thermostable 35.7 57 0.0019 18.6 3.6 21 284-304 8-28 (36)
83 3dci_A Arylesterase; SGNH_hydr 34.6 62 0.0021 26.6 5.6 51 57-110 100-156 (232)
84 3ojo_A CAP5O; rossmann fold, c 34.0 1.7E+02 0.0058 27.3 9.0 54 56-113 81-135 (431)
85 2yxb_A Coenzyme B12-dependent 33.9 1.6E+02 0.0055 23.2 7.8 64 57-135 68-131 (161)
86 1bb1_A Designed, thermostable 33.6 68 0.0023 18.3 3.9 24 284-307 8-31 (36)
87 3hwr_A 2-dehydropantoate 2-red 32.3 1E+02 0.0035 27.1 7.0 53 52-121 80-132 (318)
88 1es9_A PAF-AH, platelet-activa 32.2 81 0.0028 25.8 6.0 48 57-110 92-139 (232)
89 1xg5_A ARPG836; short chain de 31.7 1.6E+02 0.0056 24.7 8.1 53 57-109 110-172 (279)
90 2hsj_A Putative platelet activ 31.6 38 0.0013 27.2 3.7 48 58-110 85-133 (214)
91 3qha_A Putative oxidoreductase 31.5 1.1E+02 0.0038 26.5 7.0 67 15-109 40-106 (296)
92 1eq2_A ADP-L-glycero-D-mannohe 31.0 1.2E+02 0.004 25.8 7.0 48 58-108 68-115 (310)
93 4h31_A Otcase, ornithine carba 30.7 53 0.0018 30.0 4.8 20 45-64 237-256 (358)
94 2h78_A Hibadh, 3-hydroxyisobut 30.4 95 0.0032 26.8 6.3 41 15-67 28-68 (302)
95 1y1p_A ARII, aldehyde reductas 30.4 1.5E+02 0.0051 25.5 7.7 55 53-109 78-132 (342)
96 4id9_A Short-chain dehydrogena 30.2 86 0.0029 27.3 6.1 54 53-108 72-125 (347)
97 1r2q_A RAS-related protein RAB 30.0 1E+02 0.0035 23.1 5.9 51 53-113 73-123 (170)
98 3zyz_A Beta-D-glucoside glucoh 29.9 17 0.0006 36.5 1.5 59 54-116 423-491 (713)
99 2ew2_A 2-dehydropantoate 2-red 29.5 61 0.0021 27.9 4.9 42 56-113 72-113 (316)
100 2x6t_A ADP-L-glycero-D-manno-h 29.5 1.2E+02 0.0042 26.5 7.0 48 58-108 115-162 (357)
101 2x4g_A Nucleoside-diphosphate- 29.4 71 0.0024 27.7 5.4 55 53-109 72-126 (342)
102 3zwc_A Peroxisomal bifunctiona 28.2 46 0.0016 33.6 4.2 90 45-151 381-487 (742)
103 1ks9_A KPA reductase;, 2-dehyd 27.8 50 0.0017 28.1 4.0 46 52-113 57-102 (291)
104 2iwr_A Centaurin gamma 1; ANK 27.8 1.4E+02 0.0047 22.8 6.4 53 54-113 68-120 (178)
105 1fxw_F Alpha2, platelet-activa 27.7 1.8E+02 0.0061 23.6 7.4 47 57-109 93-139 (229)
106 3ay3_A NAD-dependent epimerase 27.2 1.7E+02 0.006 24.2 7.4 52 53-108 58-109 (267)
107 3npg_A Uncharacterized DUF364 27.2 57 0.0019 28.2 4.1 72 54-147 160-232 (249)
108 4e6p_A Probable sorbitol dehyd 26.9 83 0.0028 26.4 5.2 52 57-109 81-142 (259)
109 3rft_A Uronate dehydrogenase; 26.8 1.5E+02 0.005 24.9 6.8 52 53-108 59-110 (267)
110 3ew7_A LMO0794 protein; Q8Y8U8 26.7 1.1E+02 0.0036 24.5 5.6 47 54-109 57-103 (221)
111 3pdu_A 3-hydroxyisobutyrate de 26.5 76 0.0026 27.3 4.9 41 15-67 26-66 (287)
112 3ehe_A UDP-glucose 4-epimerase 26.2 2E+02 0.0069 24.4 7.8 57 51-109 56-114 (313)
113 1z0j_A RAB-22, RAS-related pro 25.6 1E+02 0.0035 23.1 5.2 50 54-113 74-123 (170)
114 2c29_D Dihydroflavonol 4-reduc 25.6 1.9E+02 0.0066 24.9 7.6 57 52-109 71-128 (337)
115 4dll_A 2-hydroxy-3-oxopropiona 25.5 1.7E+02 0.0058 25.6 7.2 41 15-67 56-96 (320)
116 2k2n_A Sensor protein, SYB-CPH 25.0 1.5E+02 0.0052 22.6 6.2 28 281-308 145-172 (172)
117 3m2p_A UDP-N-acetylglucosamine 24.9 91 0.0031 26.8 5.2 55 50-108 54-108 (311)
118 2izz_A Pyrroline-5-carboxylate 24.6 65 0.0022 28.5 4.2 51 46-112 72-122 (322)
119 2fu5_C RAS-related protein RAB 24.6 1.1E+02 0.0037 23.5 5.2 50 54-113 76-125 (183)
120 3dz8_A RAS-related protein RAB 24.5 95 0.0033 24.3 4.9 50 54-113 91-140 (191)
121 2cvz_A Dehydrogenase, 3-hydrox 24.3 1.4E+02 0.0047 25.3 6.2 44 52-110 49-92 (289)
122 2akf_A Coronin-1A; coiled coil 24.0 1E+02 0.0036 17.3 3.8 23 284-306 5-27 (32)
123 1jay_A Coenzyme F420H2:NADP+ o 23.8 1.1E+02 0.0037 24.7 5.2 76 15-112 26-101 (212)
124 4as2_A Phosphorylcholine phosp 23.8 62 0.0021 29.0 3.9 42 87-130 148-191 (327)
125 3sxp_A ADP-L-glycero-D-mannohe 23.6 1.2E+02 0.0041 26.7 5.8 50 56-108 88-137 (362)
126 1vpd_A Tartronate semialdehyde 23.6 69 0.0024 27.5 4.1 41 15-67 30-70 (299)
127 2kzs_A Death-associated protei 23.5 1E+02 0.0035 22.2 4.1 56 79-150 9-64 (94)
128 2w3g_A DOSS, two component sen 23.5 1.9E+02 0.0065 20.8 6.3 46 260-305 96-147 (153)
129 2wao_A Endoglucanase E; plant 23.4 88 0.003 27.7 4.9 51 57-111 212-263 (341)
130 3e0y_A Conserved domain protei 23.0 2E+02 0.0068 21.4 6.5 45 260-304 118-167 (181)
131 1x7d_A Ornithine cyclodeaminas 22.9 1.2E+02 0.004 27.4 5.6 49 15-68 156-204 (350)
132 2a35_A Hypothetical protein PA 22.9 73 0.0025 25.4 3.9 49 59-109 66-114 (215)
133 2rh8_A Anthocyanidin reductase 22.9 1.5E+02 0.0052 25.5 6.3 58 52-110 74-132 (338)
134 4dyv_A Short-chain dehydrogena 22.6 1E+02 0.0036 26.3 5.0 54 56-109 100-164 (272)
135 3grf_A Ornithine carbamoyltran 22.4 61 0.0021 29.3 3.5 23 44-66 220-242 (328)
136 2w9x_A AXE2A, CJCE2B, putative 22.3 2.2E+02 0.0075 25.4 7.4 54 57-111 235-296 (366)
137 4egf_A L-xylulose reductase; s 22.2 2.8E+02 0.0097 23.1 7.8 53 56-109 96-158 (266)
138 1ek0_A Protein (GTP-binding pr 22.2 1.8E+02 0.006 21.7 5.9 51 53-113 70-120 (170)
139 3dhn_A NAD-dependent epimerase 22.2 77 0.0026 25.7 3.9 51 52-108 61-111 (227)
140 1iy8_A Levodione reductase; ox 22.2 2.6E+02 0.0088 23.3 7.5 51 57-109 91-152 (267)
141 2q0q_A ARYL esterase; SGNH hyd 22.0 1.2E+02 0.0041 24.1 5.1 48 59-110 84-140 (216)
142 3pk0_A Short-chain dehydrogena 22.0 2.8E+02 0.0095 23.1 7.7 90 15-108 36-146 (262)
143 3n4h_A Putative tautomerase; C 21.9 93 0.0032 24.0 4.2 55 139-206 83-137 (148)
144 3qiv_A Short-chain dehydrogena 21.8 2.9E+02 0.0098 22.6 7.7 91 15-110 35-149 (253)
145 2gn4_A FLAA1 protein, UDP-GLCN 21.6 1.1E+02 0.0038 27.0 5.2 54 53-108 86-141 (344)
146 2efe_B Small GTP-binding prote 21.6 1.4E+02 0.0046 22.8 5.2 50 54-113 80-129 (181)
147 1wdk_A Fatty oxidation complex 21.6 75 0.0026 31.8 4.3 45 46-105 382-426 (715)
148 2h1q_A Hypothetical protein; Z 21.4 41 0.0014 29.5 2.1 75 52-149 180-255 (270)
149 2gf9_A RAS-related protein RAB 21.1 1.4E+02 0.0049 23.1 5.3 51 53-113 89-139 (189)
150 3oh8_A Nucleoside-diphosphate 20.9 1.7E+02 0.0057 27.6 6.5 56 52-108 195-253 (516)
151 2bcg_Y Protein YP2, GTP-bindin 20.8 1.7E+02 0.0059 23.0 5.8 50 54-113 76-125 (206)
152 3doj_A AT3G25530, dehydrogenas 20.7 1.2E+02 0.0041 26.4 5.1 41 15-67 46-86 (310)
153 2zyd_A 6-phosphogluconate dehy 20.6 4E+02 0.014 24.9 9.1 74 15-111 40-116 (480)
154 4dry_A 3-oxoacyl-[acyl-carrier 20.5 1.7E+02 0.0057 25.0 5.9 53 57-109 110-173 (281)
155 4dkx_A RAS-related protein RAB 20.5 1E+02 0.0034 25.5 4.3 49 55-113 82-130 (216)
156 2bka_A CC3, TAT-interacting pr 20.5 81 0.0028 25.8 3.8 54 52-108 78-131 (242)
157 2c5a_A GDP-mannose-3', 5'-epim 20.4 2.2E+02 0.0077 25.1 7.0 54 53-108 88-144 (379)
158 3ghy_A Ketopantoate reductase 20.3 41 0.0014 29.9 1.9 45 52-112 64-108 (335)
159 3l5o_A Uncharacterized protein 20.3 45 0.0015 29.3 2.1 75 51-148 179-254 (270)
160 2ew1_A RAS-related protein RAB 20.2 1.7E+02 0.0059 23.3 5.7 50 54-113 94-143 (201)
161 3dc7_A Putative uncharacterize 20.2 79 0.0027 25.7 3.6 51 57-111 81-139 (232)
162 3uan_A Heparan sulfate glucosa 20.2 97 0.0033 26.8 4.3 29 90-119 91-120 (269)
163 2cfc_A 2-(R)-hydroxypropyl-COM 20.1 3.5E+02 0.012 21.9 7.8 50 58-109 80-142 (250)
No 1
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=100.00 E-value=1.1e-74 Score=545.72 Aligned_cols=304 Identities=42% Similarity=0.674 Sum_probs=280.7
Q ss_pred cccccccCCCCeEEEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHH
Q 021646 2 IARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMS 81 (309)
Q Consensus 2 ~~~g~~~~~~~~~~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~ 81 (309)
|+.+.+|+.+|++.|+++|+..++++++|++|||+|+++++.+++.+.+++|++++||||||||+|.||+|||+|+||++
T Consensus 52 l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~~daDvVVitag~prkpG~tR~DLl~ 131 (375)
T 7mdh_A 52 LASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLD 131 (375)
T ss_dssp HHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHH
T ss_pred HHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHhCCCCEEEEcCCCCCCCCCCHHHHHH
Confidence 67899999999999999999767888999999999999777777888888999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeeeEE
Q 021646 82 KNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVII 161 (309)
Q Consensus 82 ~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV 161 (309)
.|++|++++++.|++++.|+++++|+|||+|+|||++|++++++|+++||+||.|||+||+++||++++++|++|++++|
T Consensus 132 ~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD~~t~ia~k~sg~~~~rvig~gT~LDsaR~r~~lA~~lgv~~~~V~~v~V 211 (375)
T 7mdh_A 132 INGQIFADQGKALNAVASKNVKVLVVGNPCNTNALICLKNAPDIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTI 211 (375)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHTTSCGGGEECCEE
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEEEecCchhHHHHHHHHHcCCCCccEEEeeehHHHHHHHHHHHHHhCcChhhcccceE
Confidence 99999999999999983379999999999999999999996566777799999999999999999999999999998557
Q ss_pred EeecCCceeeecCCceeecCCCCcchhhhhcccccchhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCCCC
Q 021646 162 WGNHSSTQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPK 241 (309)
Q Consensus 162 ~GehG~s~vp~~S~~~v~~~~~~~pl~~~~~~~~~~~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~~~ 241 (309)
|||||+|+||+||+++| +|+|+.+++.+++|..+++.++|+++|++|++.||+|+++++|.++++.|.+|+.+.++
T Consensus 212 ~GeHgdt~vp~~S~a~V----~G~pl~~~~~~~~~~~~~i~~~v~~~g~eII~~kG~ts~a~aa~~i~~~i~~~l~g~d~ 287 (375)
T 7mdh_A 212 WGNHSTTQVPDFLNAKI----DGRPVKEVIKRTKWLEEEFTITVQKRGGALIQKWGRSSAASTAVSIADAIKSLVTPTPE 287 (375)
T ss_dssp EBCSSTTCEEECSSCEE----TTEEGGGTCCCHHHHHHHHHHHHHTHHHHHHHHTSSCCHHHHHHHHHHHHHHHHSCCCT
T ss_pred EecCCCceeeeeecccC----CCEEhhHhccchhhHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999 99999999877778778899999999999999999999877777889999888875448
Q ss_pred ceEEEeeeecCC-CCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhC
Q 021646 242 GTWVSMGVYSDG-SYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAYSCLN 309 (309)
Q Consensus 242 ~~v~~~sv~~~g-~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~~~~~ 309 (309)
++++|+|++++| +||+|+|+|||+||++ ++|+++++++++|+++|+++|++|+++|+++++.+..+|.
T Consensus 288 ~~v~~vs~~~~G~~YGi~~dv~~s~P~vlg~~Gv~~iv~~l~L~~~E~~~l~~Sa~~L~~e~~~~~~~~~ 357 (375)
T 7mdh_A 288 GDWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDYELATDVSNDDFLWERIKKSEAELLAEKKCVAHLTG 357 (375)
T ss_dssp TCCEEEEEECTTCSSCCCSSSEEEEEEECCSSSCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHTHHHHT
T ss_pred CeEEEEEEEeCCccCCCCCceEEEEEEEEcCCeeEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999 7999889999999986 8999999955899999999999999999999998887763
No 2
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=100.00 E-value=2.5e-72 Score=526.46 Aligned_cols=299 Identities=53% Similarity=0.888 Sum_probs=266.9
Q ss_pred CcccccccCCCCeEEEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHH
Q 021646 1 MIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVM 80 (309)
Q Consensus 1 ~~~~g~~~~~~~~~~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~ 80 (309)
+|++|.+||.+++.+|+|+|+++..+.++|++|||+|++++...++.+.++.+++++||||||||||.||||||+|+||+
T Consensus 43 ~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~~~advVvi~aG~prkpGmtR~DLl 122 (345)
T 4h7p_A 43 LIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFDGVAIAIMCGAFPRKAGMERKDLL 122 (345)
T ss_dssp HHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHHTTTCSEEEECCCCCCCTTCCHHHHH
T ss_pred HHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHHHhCCCCEEEECCCCCCCCCCCHHHHH
Confidence 47899999999999999999986666789999999999988877888888999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCC-CcEEEechhHHHHHHHHHHHHhCCCCCCeeee
Q 021646 81 SKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPA-KNITCLTRLDHNRAMGQISERLKVHVSDVKNV 159 (309)
Q Consensus 81 ~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~-~~ig~gt~lds~R~~~~la~~l~v~~~~v~~~ 159 (309)
+.|++|++++++.|++||+|+++|+|+|||+|+|||+++++++|+|+ ++||+||.||++||+++||++++++|++|+++
T Consensus 123 ~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~~~i~~~~~~g~~~~r~i~~~t~LDs~R~~~~la~~~~v~~~~V~~~ 202 (345)
T 4h7p_A 123 EMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNALILLKSAQGKLNPRHVTAMTRLDHNRALSLLARKAGVPVSQVRNV 202 (345)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHHTTTCSCGGGEEECCHHHHHHHHHHHHHHHTSCGGGEECC
T ss_pred HHhHHHHHHHHHHHHhhccCceEEEEeCCCcchHHHHHHHHccCCCCcceeeeccchhHHHHHHHHHHHHCcChhheecc
Confidence 99999999999999999988999999999999999999997677655 55999999999999999999999999999988
Q ss_pred EEEeecCCceeeecCCceeecCCCCcchhhhhcccccchhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCC
Q 021646 160 IIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGT 239 (309)
Q Consensus 160 vV~GehG~s~vp~~S~~~v~~~~~~~pl~~~~~~~~~~~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~ 239 (309)
+||||||+++||+||++++ +|+|+.+++.++ |..+++.++++++|++|++.||.++++++|+++++++++|+.+.
T Consensus 203 ~V~G~HG~t~vp~~s~a~v----~g~~~~~~~~~~-~~~~~~~~~v~~~g~eIi~~kg~ss~~s~a~a~~~~~~~~l~~~ 277 (345)
T 4h7p_A 203 IIWGNHSSTQVPDTDSAVI----GTTPAREAIKDD-ALDDDFVQVVRGRGAEIIQLRGLSSAMSAAKAAVDHVHDWIHGT 277 (345)
T ss_dssp EEEBCSSTTCEEECTTCEE----TTEEGGGGCCC-------HHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHCC
T ss_pred eeecCCCCeEEeeeccceE----CCccHHHhcchh-hHHHHHHHHHHhhhhhhhhcCCCcchhhHHHHHHHHHHHHhcCC
Confidence 8899999999999999999 999999987654 44568999999999999999998888899999999999988886
Q ss_pred CCceEEEeeeec-CCCCCCCCceEEEEeEEecCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 021646 240 PKGTWVSMGVYS-DGSYGIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLA 304 (309)
Q Consensus 240 ~~~~v~~~sv~~-~g~ygi~~~v~~s~Pv~~~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~ 304 (309)
++..++++++++ +|+||+|+|+|||+||++.+|+++++++++|+++|+++|++|+++|+++++.+
T Consensus 278 ~~~~~vs~~v~s~~g~YGi~~~v~~s~Pv~~~~G~~~iv~~l~l~~~e~~~l~~s~~~L~~E~~~A 343 (345)
T 4h7p_A 278 PEGVYVSMGVYSDENPYGVPSGLIFSFPCTCHAGEWTVVSGKLNGDLGKQRLASTIAELQEERAQA 343 (345)
T ss_dssp CTTCCEEEEEECTTCTTCCCSSCEEEEEEEEETTEEEECCSCC-----CGGGHHHHHHHHHHHHHT
T ss_pred CCceEEEEEEEeCCCCcCCCCCEEEEEEEEEeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 667788888887 59999999999999999878999999878999999999999999999988654
No 3
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=100.00 E-value=3.3e-72 Score=524.79 Aligned_cols=305 Identities=61% Similarity=0.953 Sum_probs=276.6
Q ss_pred cccccccCCCCeEEEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHH
Q 021646 2 IARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMS 81 (309)
Q Consensus 2 ~~~g~~~~~~~~~~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~ 81 (309)
|+.+.+++.+||++|+|+|+++.+++++|++|||+|+++++.+++.+.++++++++|||+||+|||.|++|||+|+|+++
T Consensus 23 L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~daDvVvitAg~prkpG~tR~dll~ 102 (333)
T 5mdh_A 23 IGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLK 102 (333)
T ss_dssp HHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSEEEECCSCCCCTTCCTTTTHH
T ss_pred HHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHH
Confidence 67888999999999999999755578999999999988776677888888899999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHhhhcCCCc-EEEEecCchhHHHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeeeE
Q 021646 82 KNVSIYKAQASALEKHAAPNC-KVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVI 160 (309)
Q Consensus 82 ~N~~i~~~i~~~i~~~~~p~~-~vivvsnPvd~~t~~~~~~~~~~~~~~ig~gt~lds~R~~~~la~~l~v~~~~v~~~v 160 (309)
.|+++++++++.+++++ |++ +++++|||+|+|||+++++++++|+++||+||.|||+||+++||++++++|++|++++
T Consensus 103 ~N~~i~~~i~~~i~~~~-~~~~~vivvsNPvd~~t~~~~~~~~~~p~~~ig~~t~LDs~R~~~~la~~l~v~~~~v~~~v 181 (333)
T 5mdh_A 103 ANVKIFKCQGAALDKYA-KKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKNVI 181 (333)
T ss_dssp HHHHHHHHHHHHHHHHS-CTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCE
T ss_pred HHHHHHHHHHHHHHHhC-CCCeEEEEcCCchHHHHHHHHHHcCCCCcCEEEEEEhHHHHHHHHHHHHHhCcCHHHeeecE
Confidence 99999999999999999 576 6999999999999999999546777889999999999999999999999999999997
Q ss_pred EEeecCCceeeecCCceeecCCCCcc--hhhhhcccccchhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhC
Q 021646 161 IWGNHSSTQYPDVNHATVTTSKGEKP--VREAVADDNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLG 238 (309)
Q Consensus 161 V~GehG~s~vp~~S~~~v~~~~~~~p--l~~~~~~~~~~~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~ 238 (309)
||||||+|+||+||++++.. +|.| +.+++.+++|..+++.++++++|++|++.||+++.+++|.++++++++|+.+
T Consensus 182 V~GeHgds~vp~~S~a~v~i--~g~~~~~~~~~~~~~~~~~~~~~~v~~~g~eIi~~k~~ssa~~~a~~~~~~~~~il~~ 259 (333)
T 5mdh_A 182 IWGNHSSTQYPDVNHAKVKL--QAKEVGVYEAVKDDSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFG 259 (333)
T ss_dssp EEBCSSTTCEEECTTCEEEC--SSCEEEHHHHHCCHHHHHTHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHC
T ss_pred EEEcCCCCEEEeeeccEecc--CCeeccHHHhhccccccHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHHhcC
Confidence 79999999999999998632 5665 4577777778777999999999999999888777778888899999988887
Q ss_pred CCCceEEEeeeecCC-CCCCCCceEEEEeEEecCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhC
Q 021646 239 TPKGTWVSMGVYSDG-SYGIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAYSCLN 309 (309)
Q Consensus 239 ~~~~~v~~~sv~~~g-~ygi~~~v~~s~Pv~~~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~~~~~ 309 (309)
+++++++|+|++++| +||+++++|||+||++++|+++++++++||++|+++|++|++.|+++++++.++|+
T Consensus 260 ~~~~~v~~~s~~~~G~~YGi~~~v~~s~P~~~~~Gv~~iv~~l~L~~~E~~~l~~sa~~L~~~~~~~~~~l~ 331 (333)
T 5mdh_A 260 TPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKIVEGLPINDFSREKMDLTAKELAEEKETAFEFLS 331 (333)
T ss_dssp CCTTCCEEEEEECTTCSSSCCSSCEEEEEEEEETTEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEEecCCcccCCCCCeEEEEEEEEcCCeEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 544789999999999 99998899999998779999999876899999999999999999999999999874
No 4
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=100.00 E-value=9e-67 Score=486.91 Aligned_cols=275 Identities=21% Similarity=0.347 Sum_probs=248.1
Q ss_pred CCeEEEEEEecCCccchhhHHHHHHhhccCCC-CcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHH
Q 021646 11 DQPVILHMLDIEPAAEALNGVKMELIDAAFPL-LKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKA 89 (309)
Q Consensus 11 ~~~~~l~L~D~~~~~~~~~g~~~DL~~~~~~~-~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~ 89 (309)
+...+|+|+|++ +++++|++|||+|+..+. ...+ ..+++|++++|||+||||+|.|++|||+|+|+++.|++|+++
T Consensus 42 ~~~~el~L~Di~--~~~~~g~a~DL~~~~~~~~~~~i-~~~~d~~~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~ 118 (331)
T 4aj2_A 42 DLADELALVDVI--EDKLKGEMMDLQHGSLFLKTPKI-VSSKDYSVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKF 118 (331)
T ss_dssp TCCSEEEEECSC--HHHHHHHHHHHHHTGGGCSCCEE-EECSSGGGGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHH
T ss_pred CCCceEEEEeCC--hHHHHHHHHhhhhhhhccCCCeE-EEcCCHHHhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHH
Confidence 444589999997 679999999999987433 3333 334678899999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCc
Q 021646 90 QASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSST 168 (309)
Q Consensus 90 i~~~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s 168 (309)
+++.|+++| |+++++++|||+|+||++++++ +|+|++| ||.||.||++|+++++|++++++|++|++++ |||||++
T Consensus 119 i~~~i~~~~-p~a~vlvvtNPvdi~t~~~~k~-sg~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~V~~~V-iGeHG~s 195 (331)
T 4aj2_A 119 IIPNVVKYS-PQCKLLIVSNPVDILTYVAWKI-SGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWV-LGEHGDS 195 (331)
T ss_dssp HHHHHHHHC-TTCEEEECSSSHHHHHHHHHHH-HCCCGGGEEECTTHHHHHHHHHHHHHHHTSCGGGCBCCE-EBCSSTT
T ss_pred HHHHHHHHC-CCeEEEEecChHHHHHHHHHHH-hCCCHHHEEeeccccHHHHHHHHHHHHhCCCHHHCEEeE-EecCCCc
Confidence 999999998 7999999999999999999999 6999998 6889999999999999999999999999984 9999999
Q ss_pred eeeecCCceeecCCCCcchhhhhc-------ccccchhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCCCC
Q 021646 169 QYPDVNHATVTTSKGEKPVREAVA-------DDNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPK 241 (309)
Q Consensus 169 ~vp~~S~~~v~~~~~~~pl~~~~~-------~~~~~~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~~~ 241 (309)
+||+||+++| +|+|+.+++. +++| +++.++|+++|++|++.||+|+| ++|+++++++.+ ++.+ +
T Consensus 196 ~vp~~S~~~v----~G~p~~~~~~~~~~~~~~~~~--~~i~~~v~~~g~eIi~~kg~t~~-a~a~a~a~~~~a-il~d-~ 266 (331)
T 4aj2_A 196 SVPVWSGVNV----AGVSLKSLNPQLGTDADKEQW--KDVHKQVVDSAYEVIKLKGYTSW-AIGLSVADLAES-IMKN-L 266 (331)
T ss_dssp CEECGGGCEE----TTEEHHHHCTTTTSTTCTTCT--HHHHHHHHHHHHHHHHHHSSCCH-HHHHHHHHHHHH-HHTT-C
T ss_pred eeEeeecCeE----CCEEHHHHHhhccCCCCHHHH--HHHHHHHHHhHHHHhhcCCCCch-hHHHHHHHHHHH-HHhC-C
Confidence 9999999999 9999998864 2345 68999999999999999998886 578889998875 5565 8
Q ss_pred ceEEEeeeecCCCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 021646 242 GTWVSMGVYSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEK 301 (309)
Q Consensus 242 ~~v~~~sv~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i 301 (309)
++++|+|++++|+||+++++|||+||++ ++|++++++ ++|+++|+++|++|++.|++.+
T Consensus 267 ~~~~~vs~~~~g~ygi~~~v~~s~P~~lg~~Gv~~iv~-l~L~~~E~~~l~~s~~~l~~~~ 326 (331)
T 4aj2_A 267 RRVHPISTMIKGLYGIKEDVFLSVPCILGQNGISDVVK-VTLTPDEEARLKKSADTLWGIQ 326 (331)
T ss_dssp CEEEEEEEECTTGGGCCSCCEEEEEEEEETTEEEEEEC-CCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEecCCccCCcCceEEEEEEEEcCCeeEEEcc-CCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999789999999986 999999998 9999999999999999998833
No 5
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=100.00 E-value=1.5e-67 Score=491.19 Aligned_cols=276 Identities=23% Similarity=0.333 Sum_probs=234.1
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASAL 94 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i 94 (309)
+|+|+|++ +++++|++|||+|+..+ .+++.+.++++++++|||+||+|+|.+++|||+|+|+++.|++|++++++.|
T Consensus 36 el~l~D~~--~~k~~g~a~DL~~~~~~-~~~~~i~~~~~~a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i 112 (326)
T 3vku_A 36 EIGIVDIF--KDKTKGDAIDLEDALPF-TSPKKIYSAEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPI 112 (326)
T ss_dssp EEEEECSC--HHHHHHHHHHHHTTGGG-SCCCEEEECCGGGGTTCSEEEECCCCC----------------CHHHHHHHH
T ss_pred eEEEEeCC--hHHHHHHHhhHhhhhhh-cCCcEEEECcHHHhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 89999996 67999999999998743 3566677778999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceeeec
Q 021646 95 EKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDV 173 (309)
Q Consensus 95 ~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp~~ 173 (309)
+++| |+++++++|||+|++|++++++ +|||++| ||.||.||++||++++|++++++|++|+++ ||||||+|+||+|
T Consensus 113 ~~~~-p~a~ilvvtNPvdi~t~~~~k~-~g~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~V~~~-ViGeHGdt~vp~~ 189 (326)
T 3vku_A 113 VDSG-FNGIFLVAANPVDILTYATWKL-SGFPKNRVVGSGTSLDTARFRQSIAKMVNVDARSVHAY-IMGEHGDTEFPVW 189 (326)
T ss_dssp HTTT-CCSEEEECSSSHHHHHHHHHHH-HCCCGGGEEECTTHHHHHHHHHHHHHHHTSCGGGEECC-EEBSSSTTCEECG
T ss_pred HhcC-CceEEEEccCchHHHHHHHHHh-cCCCHHHeeeecccCcHHHHHHHHHHHhCCCHHHCeEE-EEcCCCCeeEEee
Confidence 9999 7999999999999999999999 7999999 588999999999999999999999999998 5999999999999
Q ss_pred CCceeecCCCCcchhhhhcc----cccchhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCCCCceEEEeee
Q 021646 174 NHATVTTSKGEKPVREAVAD----DNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGV 249 (309)
Q Consensus 174 S~~~v~~~~~~~pl~~~~~~----~~~~~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~~sv 249 (309)
|+++| +|+|+.+++.+ ++|..+++.++|+++|++|++.||+|+| ++|+++++++. +|+++ +++++|+|+
T Consensus 190 S~a~v----~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~kG~t~~-a~a~a~~~~~~-ail~~-~~~v~~~s~ 262 (326)
T 3vku_A 190 SHANI----GGVTIAEWVKAHPEIKEDKLVKMFEDVRNKAYEIIKLKGATFY-GIATALARISK-AILND-ENAVLPLSV 262 (326)
T ss_dssp GGCEE----TTEEHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHSCCCH-HHHHHHHHHHH-HHHTT-CCEEEEEEE
T ss_pred ecccc----CCEEHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhcCCCchH-HHHHHHHHHHH-HHhcC-CCceEEEEe
Confidence 99999 99999998765 4566689999999999999999998886 56788999876 55665 899999999
Q ss_pred ecCCCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 021646 250 YSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAY 305 (309)
Q Consensus 250 ~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~ 305 (309)
+++|+||+ +++|||+||++ ++|++++++ ++||++|+++|++|++.|++.++...
T Consensus 263 ~~~g~yg~-~~v~~s~P~~lg~~Gv~~iv~-l~L~~~E~~~l~~sa~~L~~~~~~~~ 317 (326)
T 3vku_A 263 YMDGQYGL-NDIYIGTPAVINRNGIQNILE-IPLTDHEEESMQKSASQLKKVLTDAF 317 (326)
T ss_dssp EEEEGGGE-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHCC-----
T ss_pred eccCccCC-CceEEEEEEEEcCCceEEEec-CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 59999999986 999999998 99999999999999999999887653
No 6
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=100.00 E-value=5e-67 Score=485.90 Aligned_cols=280 Identities=23% Similarity=0.365 Sum_probs=246.6
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeec-CChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVAT-TDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASA 93 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~-~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~ 93 (309)
+|+|+|++ +++++|++|||+|+.++..++..+. ++++++++|||+||||+|.+++|||+|+|++..|++|++++++.
T Consensus 27 el~l~D~~--~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~ 104 (314)
T 3nep_X 27 EVVMVDIK--DGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQ 104 (314)
T ss_dssp EEEEECSS--TTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-------CHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCc--hHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHH
Confidence 89999997 5789999999999876544444443 46799999999999999999999999999999999999999999
Q ss_pred HhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceeee
Q 021646 94 LEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPD 172 (309)
Q Consensus 94 i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp~ 172 (309)
|+++| |+++++++|||+|+|||+++++ +|||++| ||.||.||++||++++|++++++|++|++++ |||||+|+||+
T Consensus 105 i~~~~-p~a~vivvtNPvd~~t~~~~k~-~g~p~~rviG~~t~LD~~R~~~~la~~lgv~~~~v~~~V-iG~Hg~t~vp~ 181 (314)
T 3nep_X 105 FVEGS-PDSTIIVVANPLDVMTYVAYEA-SGFPTNRVMGMAGVLDTGRFRSFIAEELDVSVRDVQALL-MGGHGDTMVPL 181 (314)
T ss_dssp HHTTC-TTCEEEECCSSHHHHHHHHHHH-HTCCGGGEEECCHHHHHHHHHHHHHHHHTCCGGGEEEEE-EESSGGGEEEE
T ss_pred HHHhC-CCcEEEecCCchhHHHHHHHHh-cCCChHHEEeecCchHHHHHHHHHHHHhCcCHHHeEEEE-ECCCCCcEEee
Confidence 99999 7999999999999999999999 7999999 5888899999999999999999999999995 89999999999
Q ss_pred cCCceeecCCCCcchhhhhcccccchhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCCCCceEEEeeeecC
Q 021646 173 VNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSD 252 (309)
Q Consensus 173 ~S~~~v~~~~~~~pl~~~~~~~~~~~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~~sv~~~ 252 (309)
||++++ +|+|+.+++.++.+ +++.++|+++|++|++.||.++++++|+++++++. +++++ +++++|+|++++
T Consensus 182 ~S~~~v----~g~p~~~~~~~~~~--~~i~~~v~~~g~eIi~~kg~sa~~a~a~a~~~~~~-ail~~-~~~v~~~s~~~~ 253 (314)
T 3nep_X 182 PRYTTV----GGIPVPQLIDDARI--EEIVERTKGAGGEIVDLMGTSAWYAPGAAAAEMTE-AILKD-NKRILPCAAYCD 253 (314)
T ss_dssp EEEEEE----TTEEGGGTSCHHHH--HHHHHHHHTHHHHHHHHHSSCCCHHHHHHHHHHHH-HHHHT-CCEEEEEEEEEE
T ss_pred eecCeE----CcEehhhccCHHHH--HHHHHHHHHhHHHHHhccCCcHHHHHHHHHHHHHH-HHHcC-CCeEEEEEEEec
Confidence 999999 99999998754433 68999999999999999885445678888888776 56665 899999999999
Q ss_pred CCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhC
Q 021646 253 GSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAYSCLN 309 (309)
Q Consensus 253 g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~~~~~ 309 (309)
|+||+ +++|||+||++ ++|++++++ ++|+++|+++|++|++.|+++++....+|+
T Consensus 254 g~yg~-~~~~~s~P~~lg~~Gv~~v~~-l~L~~~E~~~l~~s~~~l~~~~~~~~~~l~ 309 (314)
T 3nep_X 254 GEYGL-DDLFIGVPVKLGAGGVEEVIE-VDLDADEKAQLKTSAGHVHSNLDDLQRLRD 309 (314)
T ss_dssp SGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCC-CceEEEEEEEEeCCEEEEecC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999 79999999986 999999997 999999999999999999999999887763
No 7
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=100.00 E-value=4e-66 Score=482.16 Aligned_cols=275 Identities=24% Similarity=0.318 Sum_probs=251.5
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASAL 94 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i 94 (309)
+|+|+|++ +++++|++|||+|+.....+++.+.+++++++++||+||+|+|.|++||++|.|++..|++|++++++.|
T Consensus 32 ~l~l~D~~--~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I 109 (326)
T 3pqe_A 32 ELVVIDVN--KEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEV 109 (326)
T ss_dssp EEEEECSC--HHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEecc--hHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 89999996 6799999999999843333456666677999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceeeec
Q 021646 95 EKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDV 173 (309)
Q Consensus 95 ~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp~~ 173 (309)
.++| |+++++++|||+|++|++++++ +|||++| ||.||.||++||++++|++++++|++|+++ ||||||+|+||+|
T Consensus 110 ~~~~-p~a~vlvvtNPvd~~t~~~~k~-~g~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~V~~~-V~GeHG~t~vp~~ 186 (326)
T 3pqe_A 110 MASG-FDGIFLVATNPVDILTYATWKF-SGLPKERVIGSGTTLDSARFRFMLSEYFGAAPQNVCAH-IIGEHGDTELPVW 186 (326)
T ss_dssp HHTT-CCSEEEECSSSHHHHHHHHHHH-HCCCGGGEEECTTHHHHHHHHHHHHHHHTCCGGGEECC-EEBSSSTTCEECG
T ss_pred HHhc-CCeEEEEcCChHHHHHHHHHHh-cCCCHHHEEeeccccHHHHHHHHHHHHhCCCHHHceee-eeecCCCceeeee
Confidence 9999 6999999999999999999999 7999999 577999999999999999999999999998 5999999999999
Q ss_pred CCceeecCCCCcchhhhhcc----cccchhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCCCCceEEEeee
Q 021646 174 NHATVTTSKGEKPVREAVAD----DNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGV 249 (309)
Q Consensus 174 S~~~v~~~~~~~pl~~~~~~----~~~~~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~~sv 249 (309)
|+++| +|+|+.+++.+ ++|..+++.++|+++|++|++.||+|+| ++|+++++++.+ |+++ +++++|+|+
T Consensus 187 S~~~v----~g~p~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~kG~t~~-a~a~a~~~~~~a-il~~-~~~v~~~s~ 259 (326)
T 3pqe_A 187 SHANV----GGVPVSELVEKNDAYKQEELDQIVDDVKNAAYHIIEKKGATYY-GVAMSLARITKA-ILHN-ENSILTVST 259 (326)
T ss_dssp GGCEE----TTEEHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHHHHSCCCH-HHHHHHHHHHHH-HHTT-CCEEECCEE
T ss_pred eeeeE----CCEEHHHHhhcccCCCHHHHHHHHHHHHhhhheeeeCCCCcHH-HHHHHHHHHHHH-HhcC-CCcEEEEEE
Confidence 99999 99999998765 4566689999999999999999998875 567899998875 5555 899999999
Q ss_pred ecCCCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 021646 250 YSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTL 303 (309)
Q Consensus 250 ~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~ 303 (309)
+++|+||+ +++|||+||++ ++|++++++ ++||++|+++|++|++.|++.+++
T Consensus 260 ~~~g~yg~-~~v~~s~P~~lg~~Gv~~iv~-l~L~~~E~~~l~~s~~~l~~~~~~ 312 (326)
T 3pqe_A 260 YLDGQYGA-DDVYIGVPAVVNRGGIAGITE-LNLNEKEKEQFLHSAGVLKNILKP 312 (326)
T ss_dssp EEESGGGC-EEEEEECCEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred eeccccCC-CceEEEEEEEEcCCceEEEec-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 59999999986 999999998 999999999999999999998875
No 8
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=100.00 E-value=7e-66 Score=473.40 Aligned_cols=262 Identities=23% Similarity=0.289 Sum_probs=233.3
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCccee-ecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVV-ATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASA 93 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~-~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~ 93 (309)
+|+|+|++ +++++|+++||+|+.++...... ..+++|++++||||||||||.||+|||+|+||++.|++|+++++++
T Consensus 27 el~L~Di~--~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~ 104 (294)
T 2x0j_A 27 EIALVDIA--EDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKK 104 (294)
T ss_dssp EEEEECSS--HHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCC--CCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 89999997 67899999999998865433322 3346799999999999999999999999999999999999999999
Q ss_pred HhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceeee
Q 021646 94 LEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPD 172 (309)
Q Consensus 94 i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp~ 172 (309)
|+++| |+++++++|||||+|||++++. +|+|++| ||+||.|||+||+++|++++++++. +++ ||||||+||||+
T Consensus 105 i~~~~-p~aivlvvsNPvd~~t~i~~k~-sg~p~~rvig~gT~LDs~R~~~~l~~~~~~~~~--~~~-V~G~HGdt~vp~ 179 (294)
T 2x0j_A 105 IVENA-PESKILVVTNPMDVMTYIMWKE-SGKPRNEVFGMGNQLDSQRLKERLYNAGARNIR--RAW-IIGEHGDSMFVA 179 (294)
T ss_dssp HHTTS-TTCEEEECSSSHHHHHHHHHHH-SSCCTTSEEECCHHHHHHHHHHHHHHTTCEEEC--CCC-EEBCSSTTCEEC
T ss_pred HHhcC-CceEEEEecCcchhhHHhhHHH-cCCChhhEEEeeeEEeHHHHHHHHhhcccCCcc--eeE-EEecCCCcEEEe
Confidence 99999 6999999999999999999999 6999877 7999999999999999999988765 467 599999999999
Q ss_pred cCCceeecCCCCcchhhhhcccccchhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCCCCceEEEeeeecC
Q 021646 173 VNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSD 252 (309)
Q Consensus 173 ~S~~~v~~~~~~~pl~~~~~~~~~~~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~~sv~~~ 252 (309)
||++++ +|.|. .+++.+++++++++|++.||++.| ++|++++++++ +++++ +++++|+|++++
T Consensus 180 ~S~~~v----~g~~~----------~~~i~~~~~~~g~eIi~~kGst~~-a~a~a~~~~~~-ail~d-~~~v~~~s~~l~ 242 (294)
T 2x0j_A 180 KSLADF----DGEVD----------WEAVENDVRFVAAEVIKRKGATIF-GPAVAIYRMVK-AVVED-TGEIIPTSMILQ 242 (294)
T ss_dssp GGGCCE----ESCCC----------HHHHHHHHHTHHHHHHHHHSSCCH-HHHHHHHHHHH-HHHTT-CCCEEEEEEEEE
T ss_pred eeccCC----CCchh----------HHHHHHHHhhhheEEEecCcccch-hHHHHHHHHHH-HHHcC-CCcEEEEEEEEe
Confidence 999999 66542 257888999999999999998775 67888899876 56676 999999999999
Q ss_pred CCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 021646 253 GSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTL 303 (309)
Q Consensus 253 g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~ 303 (309)
|+||+ +++|||+|+++ ++|++ +++ ++||++|+++|++|++.||+.+++
T Consensus 243 g~yG~-~~v~~s~P~~lg~~Gve-i~~-l~L~~~E~~~l~~s~~~lk~~i~~ 291 (294)
T 2x0j_A 243 GEYGI-ENVAVGVPAKLGKNGAE-VAD-IKLSDEEIEKLRNSAKILRERLEE 291 (294)
T ss_dssp SGGGC-EEEEEEEEEEEETTEEE-ECC-CCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCC-ccEEEEEEEEEeCCEEE-EeC-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999 79999999986 99985 887 999999999999999999998874
No 9
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=100.00 E-value=9.3e-64 Score=465.66 Aligned_cols=281 Identities=19% Similarity=0.349 Sum_probs=249.6
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeec-CChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVAT-TDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASA 93 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~-~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~ 93 (309)
+|+|+|++ +++++|+++||+|+..+......+. +++++++++||+||+++|.|++||++|.|++..|+++++++++.
T Consensus 31 ~v~l~Di~--~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~ 108 (321)
T 3p7m_A 31 DVVLFDIA--QGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEG 108 (321)
T ss_dssp EEEEECSS--SSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeCC--hHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHH
Confidence 89999997 5789999999999875443333333 35689999999999999999999999999999999999999999
Q ss_pred HhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceeee
Q 021646 94 LEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPD 172 (309)
Q Consensus 94 i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp~ 172 (309)
|.++| |+++++++|||+|+||++++++ +|+|++| ||.||.||++||+++||++++++|++|++++ |||||+++||+
T Consensus 109 i~~~~-p~a~vivvtNPvd~~t~~~~k~-sg~p~~rviG~~~~LD~~R~~~~la~~l~v~~~~v~~~v-~G~HG~t~~p~ 185 (321)
T 3p7m_A 109 IKHNC-PNAFVICITNPLDIMVNMLQKF-SGVPDNKIVGMAGVLDSARFRTFLADELNVSVQQVQAYV-MGGHGDTMVPL 185 (321)
T ss_dssp HHHHC-TTCEEEECCSSHHHHHHHHHHH-HCCCGGGEEEECHHHHHHHHHHHHHHHHTCCGGGEECCE-EECSGGGEEEC
T ss_pred HHHHC-CCcEEEEecCchHHHHHHHHHh-cCCCHHHEEeeccchHHHHHHHHHHHHhCcCHHHceEee-ecCcCCceeee
Confidence 99999 7999999999999999999999 7999998 6888999999999999999999999999995 89999999999
Q ss_pred cCCceeecCCCCcchhhhhcccccc----hhHHHHHHHhhHHHHHhcCCc-ChHHHHHHHHHHHHHHHHhCCCCceEEEe
Q 021646 173 VNHATVTTSKGEKPVREAVADDNWL----NTEFITTVQQRGAAIIKARKL-SSALSAASSACDHIRDWVLGTPKGTWVSM 247 (309)
Q Consensus 173 ~S~~~v~~~~~~~pl~~~~~~~~~~----~~el~~~v~~~~~~i~~~kg~-t~~~~~a~a~~~~i~~~i~~~~~~~v~~~ 247 (309)
||+++| +|+|+.+++. +.|. .+++.++++++|++|++.||. +.++++|+++++++.+++ ++ +++++|+
T Consensus 186 ~s~~~v----~g~p~~~~~~-~~~~~~~~~~~i~~~v~~~g~eIi~~~g~gsa~~~~a~a~~~~~~ail-~~-~~~v~~~ 258 (321)
T 3p7m_A 186 TKMSNV----AGVSLEQLVK-EGKLKQERLDAIVSRTRSGGGEIVALLKTGSAYYAPAAAGIQMAESFL-KD-KKMILPC 258 (321)
T ss_dssp TTTCEE----TTEEHHHHHH-TTSSCHHHHHHHHHHHHTHHHHHHHHHSSSCCCHHHHHHHHHHHHHHH-TT-CCEEEEE
T ss_pred eeeceE----CCEehhhhcc-ccCCCHHHHHHHHHHHHhhhHHHHHhcCCCChHHHHHHHHHHHHHHHH-cC-CCcEEEE
Confidence 999999 9999999873 2332 246889999999999996442 334678889999987655 54 8999999
Q ss_pred eeecC-CCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhC
Q 021646 248 GVYSD-GSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAYSCLN 309 (309)
Q Consensus 248 sv~~~-g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~~~~~ 309 (309)
|++++ |+||+++|+|||+||++ ++|++++ + ++|+++|+++|++|++.|++.++....+|+
T Consensus 259 s~~~~~g~ygi~~~v~~s~P~~~g~~Gv~~v-~-l~L~~~E~~~l~~s~~~l~~~~~~~~~~l~ 320 (321)
T 3p7m_A 259 AAKVKAGMYGLDEDLFVGVPTEISANGVRPI-E-VEISDKEREQLQVSINAIKDLNKAAAEILA 320 (321)
T ss_dssp EEEECTTGGGCSSCEEEEEEEEEETTEEEEC-C-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEccCcccCCCCCeEEEEEEEEcCCEEEEe-C-CCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999 99999779999999986 9999999 7 999999999999999999999999888774
No 10
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=100.00 E-value=5.6e-64 Score=465.80 Aligned_cols=274 Identities=20% Similarity=0.350 Sum_probs=246.0
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCC--CcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPL--LKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAS 92 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~--~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~ 92 (309)
+++|+|+++.+++++|+++||+|..... ..++... ++++++++||+||+++|.|++||++|.|++..|++|++++++
T Consensus 34 ~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t-~d~~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~ 112 (315)
T 3tl2_A 34 DVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT-SDYADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITR 112 (315)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE-SCGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc-CCHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 8999999743678999999999986222 2334433 458999999999999999999999999999999999999999
Q ss_pred HHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceee
Q 021646 93 ALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYP 171 (309)
Q Consensus 93 ~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp 171 (309)
.+.++| |+++++++|||+|++||+++++ +|+|++| ||.||.||++|+++++|++++++|++|++++ |||||+|+||
T Consensus 113 ~i~~~~-p~a~vlvvsNPvd~~t~~~~k~-sg~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~~v-iG~Hg~t~vp 189 (315)
T 3tl2_A 113 DIAKHS-PNAIIVVLTNPVDAMTYSVFKE-AGFPKERVIGQSGVLDTARFRTFIAQELNLSVKDITGFV-LGGHGDDMVP 189 (315)
T ss_dssp HHHHHC-TTCEEEECCSSHHHHHHHHHHH-HCCCGGGEEECCHHHHHHHHHHHHHHHHTCCGGGEECCE-EBCSGGGCEE
T ss_pred HHHHhC-CCeEEEECCChHHHHHHHHHHh-cCCChHHEEeeccCcHHHHHHHHHHHHhCcCHHHceeeE-ecCCCCccee
Confidence 999999 7999999999999999999999 7999999 5888999999999999999999999999995 8999999999
Q ss_pred ecCCceeecCCCCcchhhhhcccccchhHHHHHHHhhHHHHHh--cCCcChHHHHHHHHHHHHHHHHhCCCCceEEEeee
Q 021646 172 DVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIK--ARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGV 249 (309)
Q Consensus 172 ~~S~~~v~~~~~~~pl~~~~~~~~~~~~el~~~v~~~~~~i~~--~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~~sv 249 (309)
+||+++| +|+|+.+++.++.+ +++.++|+++|++|++ .||++. +++|+++++++. +|+++ +++++|+|+
T Consensus 190 ~~S~~~v----~g~p~~~~~~~~~~--~~i~~~v~~~g~eii~~~~kgst~-~a~a~a~~~~~~-ail~~-~~~v~~~s~ 260 (315)
T 3tl2_A 190 LVRYSYA----GGIPLETLIPKERL--EAIVERTRKGGGEIVGLLGNGSAY-YAPAASLVEMTE-AILKD-QRRVLPAIA 260 (315)
T ss_dssp CGGGCEE----TTEEGGGTSCHHHH--HHHHHHHHTHHHHHHHHHSSSCCC-HHHHHHHHHHHH-HHHTT-CCEEEEEEE
T ss_pred ecccCeE----CCEEHHHhCCHHHH--HHHHHHHHHHHHHHHHhcCCCcch-HHHHHHHHHHHH-HHHcC-CCcEEEEEE
Confidence 9999999 99999998755432 5899999999999999 788776 467889999876 45565 899999999
Q ss_pred ecCCCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 021646 250 YSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTL 303 (309)
Q Consensus 250 ~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~ 303 (309)
+++|+||+ +++|||+||++ ++|++++++ ++|+++|+++|++|++.|++.++.
T Consensus 261 ~~~g~yg~-~~~~~s~P~~~g~~Gv~~v~~-l~L~~~E~~~l~~s~~~l~~~~~~ 313 (315)
T 3tl2_A 261 YLEGEYGY-SDLYLGVPVILGGNGIEKIIE-LELLADEKEALDRSVESVRNVMKV 313 (315)
T ss_dssp EEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred eccCccCC-CceEEEEEEEEeCCEEEEEcC-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 79999999986 999999997 999999999999999999988763
No 11
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=100.00 E-value=5.5e-63 Score=455.08 Aligned_cols=261 Identities=23% Similarity=0.317 Sum_probs=236.8
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCC--cceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLL--KGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAS 92 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~--~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~ 92 (309)
+|+|+|++ +++++|+++||+|...++. .++...++ +++++|||+||+++|.+++||++|.|++..|++|++++++
T Consensus 27 ~v~L~D~~--~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~ 103 (294)
T 1oju_A 27 EIALVDIA--EDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAK 103 (294)
T ss_dssp EEEEECSS--HHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEECC--hHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 89999997 6789999999999874332 34444444 9999999999999999999999999999999999999999
Q ss_pred HHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceee
Q 021646 93 ALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYP 171 (309)
Q Consensus 93 ~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp 171 (309)
.|+++| |+++++++|||+|+||++++++ +|||++| ||.||.||++||+++|| +++++|++ ++++ |||||+++||
T Consensus 104 ~i~~~~-p~a~iivvsNPvd~~t~~~~k~-~g~p~~rviG~gt~LD~~R~~~~la-~l~v~~~~-~~~V-~G~Hg~t~vp 178 (294)
T 1oju_A 104 KIVENA-PESKILVVTNPMDVMTYIMWKE-SGKPRNEVFGMGNQLDSQRLKERLY-NAGARNIR-RAWI-IGEHGDSMFV 178 (294)
T ss_dssp HHHTTS-TTCEEEECSSSHHHHHHHHHHH-SCCCTTSEEECSHHHHHHHHHHHHH-HTTCBSCC-CCCE-EBCSSTTCEE
T ss_pred HHHhhC-CCeEEEEeCCcchHHHHHHHHh-cCCCHHHEeecccccHHHHHHHHHH-HhCCCccC-ceEE-EecCCCceee
Confidence 999998 7999999999999999999999 7999999 68889999999999999 99999999 9885 9999999999
Q ss_pred ecCCceeecCCCCcchhhhhcccccchhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCCCCceEEEeeeec
Q 021646 172 DVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYS 251 (309)
Q Consensus 172 ~~S~~~v~~~~~~~pl~~~~~~~~~~~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~~sv~~ 251 (309)
+||++++ +|.| . .+++.++++++|++|++.||+++ +++|+++++++. +|+++ +++++|+|+++
T Consensus 179 ~~s~~~v----~g~~--------~--~~~~~~~v~~~g~eii~~kG~t~-~~~a~a~~~~~~-ail~~-~~~v~~~s~~~ 241 (294)
T 1oju_A 179 AKSLADF----DGEV--------D--WEAVENDVRFVAAEVIKRKGATI-FGPAVAIYRMVK-AVVED-TGEIIPTSMIL 241 (294)
T ss_dssp CGGGCCC----BSCC--------C--HHHHHHHHHTTHHHHHHHHSSCC-HHHHHHHHHHHH-HHHTT-CCCEEEEEEEE
T ss_pred ecccceE----CCcC--------h--HHHHHHHHHHHHHHHHHhcCCcc-hHHHHHHHHHHH-HHHcC-CCeEEEEEecc
Confidence 9999999 8887 1 36899999999999999999776 567889999876 55565 89999999999
Q ss_pred CCCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 021646 252 DGSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTL 303 (309)
Q Consensus 252 ~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~ 303 (309)
+|+||++ ++|||+||++ ++|++ +++ ++|+++|+++|++|++.|++.++.
T Consensus 242 ~g~yg~~-~~~~s~P~~~g~~Gv~-v~~-l~L~~~E~~~l~~s~~~l~~~~~~ 291 (294)
T 1oju_A 242 QGEYGIE-NVAVGVPAKLGKNGAE-VAD-IKLSDEEIEKLRNSAKILRERLEE 291 (294)
T ss_dssp ESGGGCE-EEEEEEEEEEETTEEE-ECC-CCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCCC-ceEEEEEEEEeCCEEE-Eec-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999995 9999999986 99999 887 999999999999999999998875
No 12
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=100.00 E-value=2.7e-63 Score=465.48 Aligned_cols=274 Identities=26% Similarity=0.387 Sum_probs=239.0
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASAL 94 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i 94 (309)
+|+|+|++ +++++|++|||+|+.++ ..++...++.+++++|||+||+|+|.|++||++|.|++..|++|++++++.|
T Consensus 36 evvLiDi~--~~k~~g~a~DL~~~~~~-~~~i~~t~d~~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i 112 (343)
T 3fi9_A 36 NLCLYDPF--AVGLEGVAEEIRHCGFE-GLNLTFTSDIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDI 112 (343)
T ss_dssp CEEEECSC--HHHHHHHHHHHHHHCCT-TCCCEEESCHHHHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCC--chhHHHHHHhhhhCcCC-CCceEEcCCHHHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 68999996 67999999999998743 3456666777889999999999999999999999999999999999999999
Q ss_pred hhhcCCCcE-EEEecCchhHHHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCee-eeEEEeecCCceeee
Q 021646 95 EKHAAPNCK-VLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVK-NVIIWGNHSSTQYPD 172 (309)
Q Consensus 95 ~~~~~p~~~-vivvsnPvd~~t~~~~~~~~~~~~~~ig~gt~lds~R~~~~la~~l~v~~~~v~-~~vV~GehG~s~vp~ 172 (309)
+++| |+++ ++++|||+|+|||+++++ +|||++|+++||.|||+||+++||++++++|++|+ ++ ||||||+++||+
T Consensus 113 ~~~~-p~a~~vlvvsNPvd~~t~i~~k~-sg~p~~rv~g~t~LDs~R~~~~la~~l~v~~~~v~~~~-ViGeHgds~vp~ 189 (343)
T 3fi9_A 113 KSYC-PDCKHVIIIFNPADITGLVTLIY-SGLKPSQVTTLAGLDSTRLQSELAKHFGIKQSLVTNTR-TYGGHGEQMAVF 189 (343)
T ss_dssp HHHC-TTCCEEEECSSSHHHHHHHHHHH-HTCCGGGEEEECCHHHHHHHHHHHHHHTSCGGGEECCC-EEESSGGGEEEC
T ss_pred HHhc-cCcEEEEEecCchHHHHHHHHHH-cCCCcceEEEecCcHHHHHHHHHHHHhCcCHHHcccce-EEEcCCCceeee
Confidence 9999 7995 999999999999999999 59999998789999999999999999999999998 56 599999999999
Q ss_pred cCCceeecCCCCcchhhhhcc-----cccchhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCCCCceEEEe
Q 021646 173 VNHATVTTSKGEKPVREAVAD-----DNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSM 247 (309)
Q Consensus 173 ~S~~~v~~~~~~~pl~~~~~~-----~~~~~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~~ 247 (309)
||+++| +|+|+.+++.. ++| +++.++|+++|++|++.||+|+|+++|++++++++++ +++ +++++|+
T Consensus 190 ~S~a~v----~G~pl~~~~~~~~~~~~~~--~~i~~~v~~~g~eIi~~kg~ss~~s~A~a~~~~~~ai-l~d-~~~v~~~ 261 (343)
T 3fi9_A 190 ASTAKV----NGTPLTDLIGTDKLTNEQW--AELKQRVVKGGANIIKLRGRSSFQSPSYVSIEMIRAA-MGG-EAFRWPA 261 (343)
T ss_dssp GGGCEE----TTEEGGGTTTBTTBCHHHH--HHHHHHHHTHHHHHHHHHSSCCCHHHHHHHHHHHHHH-TTS-SCCCSCE
T ss_pred eecceE----CCEEhhHhccccCCCHHHH--HHHHHHHHhhhHHHHHccCCCcHHhHHHHHHHHHHHH-HhC-CCceEEE
Confidence 999999 99999998643 334 4899999999999999999999989999999988764 554 7889999
Q ss_pred eeecCCCCCCCCceEEEEeEEe-cCCcEEEeCCCC--CCHHHHHHHHHHHHHHHHHHHHHhh
Q 021646 248 GVYSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGLK--VDEFSRAKMDATAEELAEEKTLAYS 306 (309)
Q Consensus 248 sv~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~--L~~~E~~~l~~s~~~i~~~i~~~~~ 306 (309)
|++++|+| . +++|||+||++ ++|++++ . ++ |+++|+++|++|++.|++.++....
T Consensus 262 s~~~~g~~-~-~~v~~s~P~~lg~~Gv~~~-~-~~~ll~~~E~~~l~~Sa~~l~~~~~~~~~ 319 (343)
T 3fi9_A 262 GCYVNVPG-F-EHIMMAMETTITKDGVKHS-D-INQLGNEAERAALKESYSHLAKLRDEVIA 319 (343)
T ss_dssp EEEEEETT-E-EEEEEEESEEEETTEEEEC-C-GGGSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCC-c-CceEEEeEEEEeCCceEEE-e-cCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999864 4 79999999975 9999976 3 45 8999999999999999999987765
No 13
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=100.00 E-value=2e-62 Score=456.89 Aligned_cols=277 Identities=22% Similarity=0.359 Sum_probs=240.4
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCC--cceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLL--KGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAS 92 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~--~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~ 92 (309)
+|+|+|++ +++++|+++||+|+..+.. .++..+ +++++++|||+||+++|.|++||++|.|++..|+++++++++
T Consensus 33 ~v~L~Di~--~~~~~g~~~dl~~~~~~~~~~~~v~~t-~d~~a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~ 109 (324)
T 3gvi_A 33 DVVLFDIA--EGTPQGKGLDIAESSPVDGFDAKFTGA-NDYAAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGA 109 (324)
T ss_dssp EEEEECSS--SSHHHHHHHHHHHHHHHHTCCCCEEEE-SSGGGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHH
T ss_pred eEEEEeCC--chhHHHHHHHHhchhhhcCCCCEEEEe-CCHHHHCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHH
Confidence 79999997 5789999999999875332 234333 457999999999999999999999999999999999999999
Q ss_pred HHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceee
Q 021646 93 ALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYP 171 (309)
Q Consensus 93 ~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp 171 (309)
.|.++| |+++++++|||+|++|++++++ +|+|++| ||.+|.||++||+++||++++++|++|++++ |||||+++||
T Consensus 110 ~i~~~~-p~a~iivvtNPvd~~t~~~~k~-sg~p~~rviG~~~~LD~~R~~~~la~~lgv~~~~v~~~v-~G~HG~t~~p 186 (324)
T 3gvi_A 110 GIKKYA-PEAFVICITNPLDAMVWALQKF-SGLPAHKVVGMAGVLDSARFRYFLSEEFNVSVEDVTVFV-LGGHGDSMVP 186 (324)
T ss_dssp HHHHHC-TTCEEEECCSSHHHHHHHHHHH-HCCCGGGEEECCHHHHHHHHHHHHHHHHTCCGGGEECCE-EECSGGGEEE
T ss_pred HHHHHC-CCeEEEecCCCcHHHHHHHHHh-cCCCHHHEEeecCccHHHHHHHHHHHHhCcCHHHCeEEE-EcCCCCceee
Confidence 999999 7999999999999999999999 7999998 6888899999999999999999999999985 8999999999
Q ss_pred ecCCceeecCCCCcchhhhhcccccc----hhHHHHHHHhhHHHHHhcCCc-ChHHHHHHHHHHHHHHHHhCCCCceEEE
Q 021646 172 DVNHATVTTSKGEKPVREAVADDNWL----NTEFITTVQQRGAAIIKARKL-SSALSAASSACDHIRDWVLGTPKGTWVS 246 (309)
Q Consensus 172 ~~S~~~v~~~~~~~pl~~~~~~~~~~----~~el~~~v~~~~~~i~~~kg~-t~~~~~a~a~~~~i~~~i~~~~~~~v~~ 246 (309)
+||++++ +|+|+.+++. +.|. .+++.++++++|++|++.||. ++++++|+++++++.+ |+++ +++++|
T Consensus 187 ~~s~~~v----~g~p~~~~~~-~~~~~~~~~~~i~~~v~~~g~eIi~~~gkgsa~~~~a~a~~~~~~a-il~~-~~~v~~ 259 (324)
T 3gvi_A 187 LARYSTV----AGIPLPDLVK-MGWTSQDKLDKIIQRTRDGGAEIVGLLKTGSAFYAPAASAIQMAES-YLKD-KKRVLP 259 (324)
T ss_dssp CGGGCEE----TTEEHHHHHH-TTSSCHHHHHHHHHHHHTHHHHHHHHHSSCCCCHHHHHHHHHHHHH-HHTT-CCEEEE
T ss_pred ehhhCeE----CCEEHHHhhh-ccCCCHHHHHHHHHHHHHhHHHHHHhcCCCcHHHHHHHHHHHHHHH-HHcC-CCcEEE
Confidence 9999999 9999999873 2332 247899999999999995432 3346778899998874 5565 899999
Q ss_pred eeeecCCCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 021646 247 MGVYSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAYS 306 (309)
Q Consensus 247 ~sv~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~~ 306 (309)
+|++++|+||+ +++|||+||++ ++|++++++ ++|+++|+++|++|++.|++.++....
T Consensus 260 ~s~~~~g~yg~-~~v~~s~P~~~g~~Gv~~v~~-l~L~~~E~~~l~~s~~~l~~~~~~~~~ 318 (324)
T 3gvi_A 260 VAAQLSGQYGV-KDMYVGVPTVIGANGVERIIE-IDLDKDEKAQFDKSVASVAGLCEACIG 318 (324)
T ss_dssp EEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCccCC-CceEEEEEEEEeCCEEEEecC-CCCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999 59999999986 999999997 999999999999999999999987654
No 14
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=100.00 E-value=1.6e-60 Score=446.08 Aligned_cols=302 Identities=52% Similarity=0.841 Sum_probs=272.1
Q ss_pred cccccccCCCCeEEEEEEecC--CccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHH
Q 021646 2 IARGIMLGPDQPVILHMLDIE--PAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDV 79 (309)
Q Consensus 2 ~~~g~~~~~~~~~~l~L~D~~--~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~ 79 (309)
|+.+.+++.+++.+|+|+|++ +.+++++|+++||+|...+....+...++.+++++|||+||+++|.++++|++|.++
T Consensus 25 L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl 104 (329)
T 1b8p_A 25 IANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDL 104 (329)
T ss_dssp HHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTTCSEEEECCCCCCCTTCCHHHH
T ss_pred HHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCCCCEEEEeCCCCCCCCCCHHHH
Confidence 345556777888899999996 114578999999999754445567777778999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeee
Q 021646 80 MSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNV 159 (309)
Q Consensus 80 ~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~ig~gt~lds~R~~~~la~~l~v~~~~v~~~ 159 (309)
+..|+++++++++.+.++|.|+++++++|||+|++|++++++++|||++|++++|.||+.|+++++|+++|++|++|+++
T Consensus 105 ~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~ 184 (329)
T 1b8p_A 105 LEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKL 184 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEESC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHHHcCCCCHHHEEEeecHHHHHHHHHHHHHhCcCHHHceEE
Confidence 99999999999999999963599999999999999999999955999999989999999999999999999999999987
Q ss_pred EEEeecCCceeeecCCceeecCCCCcchhhhhcccccchhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCC
Q 021646 160 IIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGT 239 (309)
Q Consensus 160 vV~GehG~s~vp~~S~~~v~~~~~~~pl~~~~~~~~~~~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~ 239 (309)
+|||+||++++|+||++++ +|.|+.+++.+++|..+++.+++++++++|++.||+++++++|.++++++.+++.++
T Consensus 185 ~v~G~Hg~s~~p~~s~~~v----~g~~~~~~~~~~~~~~~~i~~~v~~~g~eii~~kg~~~~~~~a~a~~~~~~ai~~~~ 260 (329)
T 1b8p_A 185 FVWGNHSPTMYADYRYAQI----DGASVKDMINDDAWNRDTFLPTVGKRGAAIIDARGVSSAASAANAAIDHIHDWVLGT 260 (329)
T ss_dssp EEEBCSSTTCEEECSSCEE----TTEEHHHHHCCHHHHHHTHHHHHHTHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHCC
T ss_pred EEEeccCCcEeeehHHCeE----CCeeHHHHhccchhhHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHhcCC
Confidence 6799999999999999999 999999887666675678999999999999999999888887778899998877764
Q ss_pred CCceEEEeeeecCCCCCCCCceEEEEeEEecCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 021646 240 PKGTWVSMGVYSDGSYGIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAYSCL 308 (309)
Q Consensus 240 ~~~~v~~~sv~~~g~ygi~~~v~~s~Pv~~~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~~~~ 308 (309)
+++++|+|++++|+||+|+|+|||+||++++|+++++++++|+++|+++|++|++.|+++++.+.++|
T Consensus 261 -~~~~~~~s~~~~g~yg~~~~~~~s~P~~i~~Gv~~i~~~~~l~~~e~~~l~~s~~~l~~~~~~~~~~~ 328 (329)
T 1b8p_A 261 -AGKWTTMGIPSDGSYGIPEGVIFGFPVTTENGEYKIVQGLSIDAFSQERINVTLNELLEEQNGVQHLL 328 (329)
T ss_dssp -TTCCEEEEEECCSGGGCCTTCEEEEEEEEETTEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred -CCcEEEEEEEecCccCCCCCeEEEEEEEEcCCEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 78999999999999999999999999877999999986589999999999999999999999998876
No 15
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=100.00 E-value=2.9e-61 Score=448.71 Aligned_cols=281 Identities=21% Similarity=0.329 Sum_probs=245.4
Q ss_pred EEEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHH
Q 021646 14 VILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASA 93 (309)
Q Consensus 14 ~~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~ 93 (309)
.+|+|+|++ +++++|+++||+|+.. ..+++.+..+.+++++|||+||+|+|.+++||++|+|++.+|+++++++++.
T Consensus 31 ~el~L~Di~--~~~~~g~~~dl~~~~~-~~~~~~v~~~~~~a~~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~ 107 (318)
T 1ez4_A 31 EEFVIVDVV--KDRTKGDALDLEDAQA-FTAPKKIYSGEYSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKP 107 (318)
T ss_dssp SEEEEECSS--HHHHHHHHHHHHGGGG-GSCCCEEEECCGGGGTTCSEEEECCCC----------CHHHHHHHHHHHHHH
T ss_pred CEEEEEeCC--chHHHHHHHHHHHHHH-hcCCeEEEECCHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 389999996 6799999999999873 3356666667899999999999999999999999999999999999999999
Q ss_pred HhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceeee
Q 021646 94 LEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPD 172 (309)
Q Consensus 94 i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp~ 172 (309)
|+++| |+++++++|||+|++|++++++ +|+|++| ||.||.||++|+++++|++++++|++|++++ |||||++++|+
T Consensus 108 i~~~~-p~a~iiv~tNPv~~~t~~~~k~-s~~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~~v-~G~HG~t~~p~ 184 (318)
T 1ez4_A 108 VVDSG-FDGIFLVAANPVDILTYATWKF-SGFPKERVIGSGTSLDSSRLRVALGKQFNVDPRSVDAYI-MGEHGDSEFAA 184 (318)
T ss_dssp HHHTT-CCSEEEECSSSHHHHHHHHHHH-HCCCGGGEEECTTHHHHHHHHHHHHHHHTCCGGGEECCE-ESSSSSSCEEC
T ss_pred HHHhC-CCeEEEEeCCcHHHHHHHHHHH-cCCCHHHEEeccccchHHHHHHHHHHHhCcChhHEEEEE-ecccCCceEEE
Confidence 99998 7999999999999999999999 6999998 5889999999999999999999999999885 99999999999
Q ss_pred cCCceeecCCCCcchhhhhcccccc---hhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCCCCceEEEeee
Q 021646 173 VNHATVTTSKGEKPVREAVADDNWL---NTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGV 249 (309)
Q Consensus 173 ~S~~~v~~~~~~~pl~~~~~~~~~~---~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~~sv 249 (309)
||++++ +|.|+.+++.+..|. .+++.+++++++++|++.||++++ ++|.++++++.+ |+++ +++++|+|+
T Consensus 185 ~s~~~v----~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~kg~t~~-~~a~a~~~~~~a-i~~~-~~~~~~vs~ 257 (318)
T 1ez4_A 185 YSTATI----GTRPVRDVAKEQGVSDDDLAKLEDGVRNKAYDIINLKGATFY-GIGTALMRISKA-ILRD-ENAVLPVGA 257 (318)
T ss_dssp GGGCEE----TTEEHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHSCCCH-HHHHHHHHHHHH-HHTT-CCEEEEEEE
T ss_pred ehhhcC----CCeeHHHHhhccCCCHHHHHHHHHHHHHhhhhheeCCCcchH-HHHHHHHHHHHH-HHhC-CCcEEEEEE
Confidence 999999 999999887543453 357889999999999999998775 567889998875 4555 899999999
Q ss_pred ecCCCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhC
Q 021646 250 YSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAYSCLN 309 (309)
Q Consensus 250 ~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~~~~~ 309 (309)
+++|+||++ ++|||+||++ ++|++++++ ++|+++|+++|++|++.|++.++.+.++|+
T Consensus 258 ~~~G~yg~~-~~~~~vP~~ig~~Gv~~i~~-~~L~~~e~~~l~~s~~~l~~~~~~~~~~~~ 316 (318)
T 1ez4_A 258 YMDGQYGLN-DIYIGTPAIIGGTGLKQIIE-SPLSADELKKMQDSAATLKKVLNDGLAELE 316 (318)
T ss_dssp EEESGGGCE-EEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eecCccCCC-ceEEEEEEEEeCCeeEEEcC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999996 9999999986 999999998 999999999999999999999999988875
No 16
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=100.00 E-value=7e-61 Score=447.46 Aligned_cols=281 Identities=23% Similarity=0.339 Sum_probs=247.1
Q ss_pred EEEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHH
Q 021646 14 VILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASA 93 (309)
Q Consensus 14 ~~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~ 93 (309)
.+|+|+|++ +++++|+++||+|+. +..+++.+..+.+++++|||+||+++|.+++||++|++++.+|+++++++++.
T Consensus 35 ~el~L~Di~--~~~~~g~~~dl~~~~-~~~~~~~i~~~~~~a~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~ 111 (326)
T 2zqz_A 35 QEIGIVDIF--KDKTKGDAIDLSNAL-PFTSPKKIYSAEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDP 111 (326)
T ss_dssp SEEEEECSC--HHHHHHHHHHHHTTG-GGSCCCEEEECCGGGGGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCC--chHhHHHHHHHHHHH-HhcCCeEEEECCHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 389999996 679999999999987 33456666667899999999999999999999999999999999999999999
Q ss_pred HhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceeee
Q 021646 94 LEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPD 172 (309)
Q Consensus 94 i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp~ 172 (309)
|+++| |+++++++|||+|++|++++++ +|+|++| ||.||.||++|+++++|++++++|++|+++ ||||||++++|+
T Consensus 112 i~~~~-p~a~iiv~tNPv~~~t~~~~k~-s~~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~~-v~G~HG~t~~p~ 188 (326)
T 2zqz_A 112 IVDSG-FNGIFLVAANPVDILTYATWKL-SGFPKNRVVGSGTSLDTARFRQSIAEMVNVDARSVHAY-IMGEHGDTEFPV 188 (326)
T ss_dssp HHHHT-CCSEEEECSSSHHHHHHHHHHH-HCCCGGGEEECTTHHHHHHHHHHHHHHHTCCGGGEECC-EEBSSSTTCEEC
T ss_pred HHHHC-CCeEEEEeCCcHHHHHHHHHHH-cCCCHHHEEEccccchHHHHHHHHHHHhCCChhheEEE-EecccCCceEee
Confidence 99999 7999999999999999999999 6999998 588899999999999999999999999987 499999999999
Q ss_pred cCCceeecCCCCcchhhhhc-ccccc---hhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCCCCceEEEee
Q 021646 173 VNHATVTTSKGEKPVREAVA-DDNWL---NTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMG 248 (309)
Q Consensus 173 ~S~~~v~~~~~~~pl~~~~~-~~~~~---~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~~s 248 (309)
||++++ +|+|+.+++. +..|. .+++.+++++++++|++.||++++ ++|.++++++.++ +++ +++++|+|
T Consensus 189 ~s~~~v----~g~~~~e~~~~~~~~~~~~~~~i~~~v~~~g~eii~~kG~t~~-~~a~aa~~~~~ai-~~~-~~~~~~vs 261 (326)
T 2zqz_A 189 WSHANI----GGVTIAEWVKAHPEIKEDKLVKMFEDVRDAAYEIIKLKGATFY-GIATALARISKAI-LND-ENAVLPLS 261 (326)
T ss_dssp GGGCEE----TTEEHHHHHHHCTTSCHHHHHHHHHHHHTHHHHHHHHHSCCCH-HHHHHHHHHHHHH-HTT-CCEEEEEE
T ss_pred hhhceE----CCEEHHHhhcccccCCHHHHHHHHHHHHHhHHHHHHcCCCcHH-HHHHHHHHHHHHH-HhC-CCcEEEEE
Confidence 999999 9999998875 33353 258999999999999999998775 5678899988754 555 89999999
Q ss_pred eecCCCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhC
Q 021646 249 VYSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAYSCLN 309 (309)
Q Consensus 249 v~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~~~~~ 309 (309)
++++|+||++ ++|||+||++ ++|++++++ ++|+++|+++|++|++.|+++++.+.++|+
T Consensus 262 v~~~G~yg~~-~~~~svP~~ig~~Gv~~i~~-~~L~~~e~~~l~~s~~~l~~~~~~~~~~~~ 321 (326)
T 2zqz_A 262 VYMDGQYGLN-DIYIGTPAVINRNGIQNILE-IPLTDHEEESMQKSASQLKKVLTDAFAKND 321 (326)
T ss_dssp EEEESGGGCE-EEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred EeccCccCCC-ceEEEEEEEEcCCeeEEEec-CCCCHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999996 9999999986 999999998 999999999999999999999999988874
No 17
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=100.00 E-value=1.4e-60 Score=442.39 Aligned_cols=278 Identities=20% Similarity=0.317 Sum_probs=251.0
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCc--ceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLK--GVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAS 92 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~--~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~ 92 (309)
+|+|+|++ +++++|+++||+|...+... .++.+ +++++++|||+||+++|.+++||++|++++.+|+++++++++
T Consensus 25 el~L~Di~--~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d~~a~~~aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~ 101 (308)
T 2d4a_B 25 DLLLIART--PGKPQGEALDLAHAAAELGVDIRISGS-NSYEDMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAE 101 (308)
T ss_dssp CEEEECSS--TTHHHHHHHHHHHHHHHHTCCCCEEEE-SCGGGGTTCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCC--hhhHHHHHHHHHHhhhhcCCCeEEEEC-CCHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 79999997 57899999999998654333 34443 457999999999999999999999999999999999999999
Q ss_pred HHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceee
Q 021646 93 ALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYP 171 (309)
Q Consensus 93 ~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp 171 (309)
.+.++| |+++++++|||+|++|++++++ +|+|++| ||.||.||++||++++|++++++|++|+++ ||||||++++|
T Consensus 102 ~i~~~~-p~a~iiv~tNPv~~~t~~~~k~-~~~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~~-v~G~Hg~t~~p 178 (308)
T 2d4a_B 102 KIKAYA-KDAIVVITTNPVDAMTYVMYKK-TGFPRERVIGFSGILDSARMAYYISQKLGVSFKSVNAI-VLGMHGQKMFP 178 (308)
T ss_dssp HHHHHC-TTCEEEECCSSHHHHHHHHHHH-HCCCGGGEEECCHHHHHHHHHHHHHHHHTSCGGGEECC-EEBCSSTTCEE
T ss_pred HHHHHC-CCeEEEEeCCchHHHHHHHHHh-cCCChhhEEEecccchHHHHHHHHHHHhCcChhHeEEE-EEeccCCceee
Confidence 999999 7999999999999999999999 7999988 688899999999999999999999999988 59999999999
Q ss_pred ecCCceeecCCCCcchhhhhcccccchhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCCCCceEEEeeeec
Q 021646 172 DVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYS 251 (309)
Q Consensus 172 ~~S~~~v~~~~~~~pl~~~~~~~~~~~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~~sv~~ 251 (309)
+||++++ +|+|+.+++.++.| +++.+++++++++|++.||.++++++|.++++++.+ |+++ +++++|+|+++
T Consensus 179 ~~s~~~v----~g~~~~~~~~~~~~--~~~~~~v~~~g~eii~~kg~s~~~~~a~a~~~~~~a-i~~~-~~~v~~vs~~~ 250 (308)
T 2d4a_B 179 VPRLSSV----GGVPLEHLMSKEEI--EEVVSETVNAGAKITELRGYSSNYGPAAGLVLTVEA-IKRD-SKRIYPYSLYL 250 (308)
T ss_dssp CGGGCEE----TTEEHHHHSCHHHH--HHHHHHHHTHHHHHHHHHSSCCCHHHHHHHHHHHHH-HHTT-CCEEEEEEEEE
T ss_pred eehhccC----CCEEHHHHcCHHHH--HHHHHHHHHhhHhhhhCCCCccHHHHHHHHHHHHHH-HHhC-CCcEEEEEEEE
Confidence 9999999 99999998765554 689999999999999999944445778899998875 5555 89999999999
Q ss_pred CCCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 021646 252 DGSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAYSCL 308 (309)
Q Consensus 252 ~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~~~~ 308 (309)
+|+||+ +++|||+||++ ++|++++++ ++|+++|+++|++|++.|++.++....+|
T Consensus 251 ~G~yg~-~~~~~~vP~~ig~~Gv~~i~~-~~L~~~e~~~l~~s~~~l~~~~~~~~~~l 306 (308)
T 2d4a_B 251 QGEYGY-NDIVAEVPAVIGKSGIERIIE-LPLTEDEKRKFDEAVQAVKKLVETLPPQL 306 (308)
T ss_dssp ESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHTSCHHH
T ss_pred cCccCC-CceEEEEEEEEcCCceEEecC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999 89999999986 999999998 99999999999999999999999877665
No 18
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=100.00 E-value=6.9e-60 Score=438.15 Aligned_cols=275 Identities=17% Similarity=0.224 Sum_probs=248.7
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASAL 94 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i 94 (309)
+|+|+|++ +++++|+++||+|+... .+++.+..+++++++|||+||+|+|.+++||++|++++.+|+++++++++.|
T Consensus 27 el~L~Di~--~~k~~g~a~dl~~~~~~-~~~~~v~~~~~~a~~~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i 103 (310)
T 2xxj_A 27 EVVLVDLD--RKLAQAHAEDILHATPF-AHPVWVWAGSYGDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRV 103 (310)
T ss_dssp EEEEECSS--HHHHHHHHHHHHTTGGG-SCCCEEEECCGGGGTTEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCC--hhHHHHHHHHHHHhHhh-cCCeEEEECCHHHhCCCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHH
Confidence 89999997 67999999999998733 3455555567999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceeeec
Q 021646 95 EKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDV 173 (309)
Q Consensus 95 ~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp~~ 173 (309)
+++| |+++++++|||+|++|++++++ +|+|++| ||.||.||++||++++|++++++|++|+++ ||||||++++|+|
T Consensus 104 ~~~~-p~a~iiv~tNPv~~~t~~~~k~-s~~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~~-v~G~HG~t~~p~~ 180 (310)
T 2xxj_A 104 LEAA-PEAVLLVATNPVDVMTQVAYAL-SGLPPGRVVGSGTILDTARFRALLAEYLRVAPQSVHAY-VLGEHGDSEVLVW 180 (310)
T ss_dssp HHHC-TTCEEEECSSSHHHHHHHHHHH-HTCCGGGEEECTTHHHHHHHHHHHHHHHTSCGGGEEEE-EEBCSSTTCEEEE
T ss_pred HHHC-CCcEEEEecCchHHHHHHHHHH-cCCCHHHEEecCcchhHHHHHHHHHHHhCcCHHHeEEE-EecccCCccccch
Confidence 9998 7999999999999999999999 6999999 588999999999999999999999999987 5999999999999
Q ss_pred CCceeecCCCCcchhhhhcccc--c---chhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCCCCceEEEee
Q 021646 174 NHATVTTSKGEKPVREAVADDN--W---LNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMG 248 (309)
Q Consensus 174 S~~~v~~~~~~~pl~~~~~~~~--~---~~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~~s 248 (309)
|++++ +|+|+.+++.+.. | ..+++.+++++++++|++.||++++ ++|.++++++.+ |+++ +++++|+|
T Consensus 181 s~~~v----~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~kg~t~~-~~a~a~~~~~~a-i~~~-~~~~~~vs 253 (310)
T 2xxj_A 181 SSAQV----GGVPLLEFAEARGRALSPEDRARIDEGVRRAAYRIIEGKGATYY-GIGAGLARLVRA-ILTD-EKGVYTVS 253 (310)
T ss_dssp EEEEE----TTEEHHHHHHHTTCCCCHHHHHHHHHHHHTHHHHHHHHHSCCCH-HHHHHHHHHHHH-HHTT-CCEEEEEE
T ss_pred hhccC----CCEEHHHHhhhcccCCCHHHHHHHHHHHHHhhHHHHhccCCcHH-HHHHHHHHHHHH-HHcC-CCCEEEEE
Confidence 99999 9999998864322 3 2357889999999999999998775 458889998875 4555 89999999
Q ss_pred eecCCCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 021646 249 VYSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLA 304 (309)
Q Consensus 249 v~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~ 304 (309)
++++|+||+ +|+|+|+||++ ++|++++++ ++|+++|+++|++|++.|++.++..
T Consensus 254 ~~~~G~yg~-~~~~~~vP~~ig~~Gv~~i~~-~~L~~~e~~~l~~s~~~l~~~~~~~ 308 (310)
T 2xxj_A 254 AFTPEVAGV-LEVSLSLPRILGAGGVAGTVY-PSLSPEERAALRRSAEILKEAAFAL 308 (310)
T ss_dssp EEEEEETTE-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCccCC-ccEEEEEEEEEeCCeeEEEcC-CCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999 89999999986 999999998 9999999999999999999999865
No 19
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=100.00 E-value=2.5e-61 Score=448.80 Aligned_cols=259 Identities=20% Similarity=0.277 Sum_probs=232.1
Q ss_pred EEEEEecCCccchhhHHHHHHhhccC-CCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAF-PLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASA 93 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~-~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~ 93 (309)
+|+|+|++ +++++|+++||+|+.. +...++... ++|++++|||+||||+|.|++|||+|+|++..|++|++++++.
T Consensus 48 ev~L~Di~--~~~~~g~a~DL~~~~~~~~~~~i~~t-~d~~~~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~ 124 (330)
T 3ldh_A 48 EVALVDVM--EDKLKGEMMDLEHGSLFLHTAKIVSG-KDYSVSAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPN 124 (330)
T ss_dssp EEEEECSC--HHHHHHHHHHHHHHGGGSCCSEEEEE-SSSCSCSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHH
T ss_pred eEEEEECC--HHHHHHHHHHhhhhhhcccCCeEEEc-CCHHHhCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHH
Confidence 89999996 6789999999999853 223444444 4678899999999999999999999999999999999999999
Q ss_pred HhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceeee
Q 021646 94 LEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPD 172 (309)
Q Consensus 94 i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp~ 172 (309)
+.++| |+++++++|||+|+||++++++ +|||++| ||.||.||++||++++|+++|++|++|+++ ||||||+|+||+
T Consensus 125 I~k~~-P~a~ilvvtNPvdi~t~~~~k~-sg~p~~rViG~gt~LDs~R~~~~lA~~lgv~~~~V~~~-V~G~Hg~t~vp~ 201 (330)
T 3ldh_A 125 IVKHS-PDCLKELHPELGTDKNKQDWKL-SGLPMHRIIGSGCNLDSARFRYLMGERLGVHSCLVIGW-VIGQHGDSVPSV 201 (330)
T ss_dssp HHHHC-TTCEEEECSSSHHHHHHHHHHH-HCCCGGGEECCTTHHHHHHHHHHHHHHHTSCTTTCCEE-ECSSSSTTCCEE
T ss_pred HHhhC-CCceEEeCCCccHHHHHHHHHH-hCCCHHHeecccCchhHHHHHHHHHHHhCCCHHHeEEE-EEcCCCCceeee
Confidence 99998 7999999999999999999999 6999999 799999999999999999999999999998 599999999999
Q ss_pred cCCceeecCCCCcchhhhhcccccchhHHHHHHHhhHHHHHhcCCcChHHHHHH-----------------HHHHHHHHH
Q 021646 173 VNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKARKLSSALSAAS-----------------SACDHIRDW 235 (309)
Q Consensus 173 ~S~~~v~~~~~~~pl~~~~~~~~~~~~el~~~v~~~~~~i~~~kg~t~~~~~a~-----------------a~~~~i~~~ 235 (309)
||+ +| .+++.++|+++|++|++.||+|+| ++|+ ++++++. +
T Consensus 202 ~S~-------------------~~-~~~~~~~v~~~g~eii~~kg~t~~-a~a~~~~~~~~~~~~~~~~~~a~~~~~~-a 259 (330)
T 3ldh_A 202 WSG-------------------MW-DAKLHKDVVDSAYEVIKLKGYTSW-AIGLVVSNPVDVLTYVAWKGCSVADLAQ-T 259 (330)
T ss_dssp EEE-------------------EE-ETTEEHHHHHCCCTTSTTCHHHHH-HHHHTTHHHHTTSSSCSCTHHHHHHHHH-H
T ss_pred chh-------------------hH-HHHHHHHHHHHHHHHHHccCCcce-eeeeeccCccchhhhhhhHHHHHHHHHH-H
Confidence 997 12 146888999999999999998775 5677 7888775 5
Q ss_pred HhCCCCceEEEeeeecCCCCCCCCceEEEEeEEecCCcEE--EeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 021646 236 VLGTPKGTWVSMGVYSDGSYGIPEGLIYSFPVTCEKGEWS--IVKGLKVDEFSRAKMDATAEELAEEKTL 303 (309)
Q Consensus 236 i~~~~~~~v~~~sv~~~g~ygi~~~v~~s~Pv~~~~Gv~~--i~~~~~L~~~E~~~l~~s~~~i~~~i~~ 303 (309)
++++ +++++|+|++++|+||+++++|||+||++.+|+++ +++ ++|+++|+++|++|++.|++.++.
T Consensus 260 il~~-~~~v~~~s~~~~g~yg~~~~v~~s~P~~lg~Gv~~~~iv~-~~L~~~E~~~l~~s~~~l~~~~~~ 327 (330)
T 3ldh_A 260 IMKD-LCRVHPVSTMVKDFYGIKDNVFLSLPCVLNNGISHCNIVK-MKLKPDEEQQLQKSATTLWDIQKD 327 (330)
T ss_dssp HHHT-CCEEECCBCCCSSSSSCCSCCCCBCCEEEBTTBCTTCCCC-CCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHcC-CCceEEEEeecCCccCCCCceEEEEEEEECCcEEEcceec-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 6665 89999999999999999779999999874499999 998 999999999999999999998764
No 20
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=100.00 E-value=7.5e-59 Score=430.67 Aligned_cols=271 Identities=20% Similarity=0.308 Sum_probs=233.6
Q ss_pred eEEEEEEecCCccchhhHHHHHHhhccCCCCcceeec--CChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHH
Q 021646 13 PVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVAT--TDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQ 90 (309)
Q Consensus 13 ~~~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~--~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i 90 (309)
..+|+|+|++ + +++|++|||+|... ...++.. +++|++++|||+||||+|.||+|||+|+|+++.|++|++++
T Consensus 27 ~~el~L~Di~--~-~~~G~a~Dl~~~~~--~~~v~~~~~~~~~~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i 101 (312)
T 3hhp_A 27 GSELSLYDIA--P-VTPGVAVDLSHIPT--AVKIKGFSGEDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNL 101 (312)
T ss_dssp TEEEEEECSS--T-THHHHHHHHHTSCS--SEEEEEECSSCCHHHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHH
T ss_pred CceEEEEecC--C-CchhHHHHhhCCCC--CceEEEecCCCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 4699999997 3 57899999999753 2233331 36799999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCcEEEEecCchhHHHHH---HHHHCCCC-CCCcEEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeec-
Q 021646 91 ASALEKHAAPNCKVLVVANPANTNALI---LKEFAPSI-PAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNH- 165 (309)
Q Consensus 91 ~~~i~~~~~p~~~vivvsnPvd~~t~~---~~~~~~~~-~~~~ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~Geh- 165 (309)
++.|.++| |+++++++|||+|+|||+ ++++ +|+ |++|+.+.|.||++||+++||++++++|++|+++ |||||
T Consensus 102 ~~~i~~~~-p~a~vlvvtNPvd~~t~~a~~~~k~-sg~~p~~rv~G~~~LD~~R~~~~la~~lgv~~~~v~~~-V~G~Hs 178 (312)
T 3hhp_A 102 VQQVAKTC-PKACIGIITNPVNTTVAIAAEVLKK-AGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVP-VIGGHS 178 (312)
T ss_dssp HHHHHHHC-TTSEEEECSSCHHHHHHHHHHHHHH-TTCCCTTSEEECCHHHHHHHHHHHHHHHTCCGGGCCCC-EEECSS
T ss_pred HHHHHHHC-CCcEEEEecCcchhHHHHHHHHHHH-cCCCCcceEEEEechhHHHHHHHHHHHhCcChhHccee-EEeccC
Confidence 99999999 799999999999999999 7888 577 9999544449999999999999999999999988 59999
Q ss_pred CCceeeecCCceeecCCCCcchhhhhcccccchhHHHHHHHhhHHHHHhcC---CcChHHHHHHHHHHHHHHHH--hCCC
Q 021646 166 SSTQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKAR---KLSSALSAASSACDHIRDWV--LGTP 240 (309)
Q Consensus 166 G~s~vp~~S~~~v~~~~~~~pl~~~~~~~~~~~~el~~~v~~~~~~i~~~k---g~t~~~~~a~a~~~~i~~~i--~~~~ 240 (309)
|+|+||+||++ +|.|+. +++| +++.++|+++|++|++.| |+ +++++|+++++++.+++ +++
T Consensus 179 g~t~vp~~S~~------~g~~~~----~~~~--~~i~~~v~~~g~eIi~~k~g~gs-t~~s~a~a~~~~~~ai~~~l~~- 244 (312)
T 3hhp_A 179 GVTILPLLSQV------PGVSFT----EQEV--ADLTKRIQNAGTEVVEAKAGGGS-ATLSMGQAAARFGLSLVRALQG- 244 (312)
T ss_dssp GGGEEECGGGC------TTCCCC----HHHH--HHHHHHHHTHHHHHHHHTTTSCC-CCHHHHHHHHHHHHHHHHHHTT-
T ss_pred CCceeeecccC------CCCCCC----HHHH--HHHHHHHHhhhHHHHhhccCCCC-chhHHHHHHHHHHHHHHHHcCC-
Confidence 78999999997 345542 3344 689999999999999988 54 44678889999887652 454
Q ss_pred CceEEEeeeecCCCCCCCCceEEEEeEEe-cCCcEEEeCCC-CCCHHHHHHHHHHHHHHHHHHHHHhhhhC
Q 021646 241 KGTWVSMGVYSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGL-KVDEFSRAKMDATAEELAEEKTLAYSCLN 309 (309)
Q Consensus 241 ~~~v~~~sv~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~-~L~~~E~~~l~~s~~~i~~~i~~~~~~~~ 309 (309)
+++++|+| +++|+ |. .++|||+||++ ++|++++++ + +|+++|+++|++|++.|+++++++++|.+
T Consensus 245 ~~~v~~~s-~~~g~-g~-~~v~~s~P~~~g~~Gv~~v~~-~~~L~~~E~~~l~~s~~~l~~~i~~g~~~~~ 311 (312)
T 3hhp_A 245 EQGVVECA-YVEGD-GQ-YARFFSQPLLLGKNGVEERKS-IGTLSAFEQNALEGMLDTLKKDIALGEEFVN 311 (312)
T ss_dssp CSSCEEEE-EEECC-CS-SCSEEEEEEEEETTEEEEECC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEE-EecCC-CC-cceEEEeEEEEeCCEEEEEcC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 78899998 88876 43 67899999986 999999998 6 99999999999999999999999999864
No 21
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=100.00 E-value=7e-59 Score=432.77 Aligned_cols=278 Identities=21% Similarity=0.294 Sum_probs=248.8
Q ss_pred EEEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHH
Q 021646 14 VILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASA 93 (309)
Q Consensus 14 ~~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~ 93 (309)
.+|+|+|++ +++++|+++||+|........+.+..+.+++++|||+||+|+|.++++|++|.+++..|+++++++++.
T Consensus 32 ~ei~L~Di~--~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~ 109 (317)
T 3d0o_A 32 DELVIIDLD--TEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGE 109 (317)
T ss_dssp SEEEEECSC--HHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCC--hhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 389999997 678999999999985323245555557799999999999999999999999999999999999999999
Q ss_pred HhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceeee
Q 021646 94 LEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPD 172 (309)
Q Consensus 94 i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp~ 172 (309)
|.++| |+++++++|||+|++|++++++ +|+|++| ||.||.||++|+++++|++++++|++|++++ |||||++++|+
T Consensus 110 i~~~~-p~a~viv~tNPv~~~t~~~~k~-~~~p~~rviG~gt~lD~~r~~~~la~~l~v~~~~v~~~v-~G~HG~t~~p~ 186 (317)
T 3d0o_A 110 VMASK-FDGIFLVATNPVDILAYATWKF-SGLPKERVIGSGTILDSARFRLLLSEAFDVAPRSVDAQI-IGEHGDTELPV 186 (317)
T ss_dssp HHHTT-CCSEEEECSSSHHHHHHHHHHH-HCCCGGGEEECTTHHHHHHHHHHHHHHHTSCGGGCBCCE-EBCSSTTCEEC
T ss_pred HHHhC-CCcEEEEecCcHHHHHHHHHHH-hCCCHHHEEecCccccHHHHHHHHHHHhCcChhhEEEEE-EecCCCCeeEe
Confidence 99998 7999999999999999999999 6999998 5888999999999999999999999999885 99999999999
Q ss_pred cCCceeecCCCCcchhhhhcccccc---hhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCCCCceEEEeee
Q 021646 173 VNHATVTTSKGEKPVREAVADDNWL---NTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGV 249 (309)
Q Consensus 173 ~S~~~v~~~~~~~pl~~~~~~~~~~---~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~~sv 249 (309)
||++++ +|.|+.+++.+..|. .+++.+++++++++|++.||++++ ++|.++++++.+ |+++ +++++|+|+
T Consensus 187 ~s~~~v----~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~kg~~~~-~~a~a~~~~~~a-i~~~-~~~~~~~~~ 259 (317)
T 3d0o_A 187 WSHANI----AGQPLKTLLEQRPEGKAQIEQIFVQTRDAAYDIIQAKGATYY-GVAMGLARITEA-IFRN-EDAVLTVSA 259 (317)
T ss_dssp TTTCEE----TTEEHHHHHHTSTTHHHHHHHHHHHHHTHHHHHHHHHSCCCH-HHHHHHHHHHHH-HHTT-CCEEEEEEE
T ss_pred eecccc----CCEEHHHHhhccCCCHHHHHHHHHHHHhhhhEEEeCCCCchH-hHHHHHHHHHHH-HHcC-CCcEEEEEE
Confidence 999999 999999887544452 357889999999999999998775 467889998875 4555 899999999
Q ss_pred ecCCCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 021646 250 YSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAY 305 (309)
Q Consensus 250 ~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~ 305 (309)
+++|+||++ ++|+|+||++ ++|++++++ ++|+++|+++|++|++.|++.++...
T Consensus 260 ~~~g~~g~~-~~~~~vP~~ig~~Gv~~i~~-~~l~~~e~~~l~~s~~~l~~~~~~~~ 314 (317)
T 3d0o_A 260 LLEGEYEEE-DVYIGVPAVINRNGIRNVVE-IPLNDEEQSKFAHSAKTLKDIMAEAE 314 (317)
T ss_dssp EEESGGGCE-EEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHC--
T ss_pred eecCccCCC-ceEEEEEEEEeCCeeEEEec-CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999996 9999999986 999999998 99999999999999999999998664
No 22
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=100.00 E-value=1.4e-58 Score=430.81 Aligned_cols=276 Identities=24% Similarity=0.343 Sum_probs=237.6
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASAL 94 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i 94 (309)
+|+|+|++ +++++|+++||+|+. +..+.+.+..+++++++|||+||+++|.|++||++|+|++..|+++++++++.|
T Consensus 34 ev~L~Di~--~~~~~g~~~dl~~~~-~~~~~~~i~~~~~~a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i 110 (318)
T 1y6j_A 34 ELVLIDVF--KEKAIGEAMDINHGL-PFMGQMSLYAGDYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNI 110 (318)
T ss_dssp EEEEECCC-----CCHHHHHHTTSC-CCTTCEEEC--CGGGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCC--hHHHHHHHHHHHHhH-HhcCCeEEEECCHHHhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHH
Confidence 89999997 678999999999987 334566666567999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceeeec
Q 021646 95 EKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDV 173 (309)
Q Consensus 95 ~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp~~ 173 (309)
.++| |+++++++|||+|++|++++++ +|+|++| ||.||.||++|+++++|++++++|++|+++ ||||||++++|+|
T Consensus 111 ~~~~-p~a~viv~tNPv~~~~~~~~k~-s~~p~~rviG~gt~Ld~~r~~~~la~~lgv~~~~v~~~-v~G~HG~t~~p~~ 187 (318)
T 1y6j_A 111 MKYY-NHGVILVVSNPVDIITYMIQKW-SGLPVGKVIGSGTVLDSIRFRYLLSEKLGVDVKNVHGY-IIGEHGDSQLPLW 187 (318)
T ss_dssp HHHC-CSCEEEECSSSHHHHHHHHHHH-HTCCTTTEEECTTHHHHHHHHHHHHTTTTCCTTTEECC-EEBCSSSSCEECC
T ss_pred HHhC-CCcEEEEecCcHHHHHHHHHHH-cCCCHHHEeccCCchHHHHHHHHHHHHhCCCHHHeEEE-EecccCCcEeeee
Confidence 9998 7999999999999999999999 6999988 588999999999999999999999999997 5999999999999
Q ss_pred CCceeecCCCCcchhhhhccc--ccc---hhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCCCCceEEEee
Q 021646 174 NHATVTTSKGEKPVREAVADD--NWL---NTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMG 248 (309)
Q Consensus 174 S~~~v~~~~~~~pl~~~~~~~--~~~---~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~~s 248 (309)
|++++ +|.|+.+++.+. .|. .+++.+++++++++|++.||++++ ++|.++++++.+++ ++ +++++|+|
T Consensus 188 s~~~v----~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~kg~t~~-~~a~a~~~~~~ai~-~~-~~~~~~~~ 260 (318)
T 1y6j_A 188 SCTHI----AGKNINEYIDDPKCNFTEEDKKKIAEDVKTAGATIIKNKGATYY-GIAVSINTIVETLL-KN-QNTIRTVG 260 (318)
T ss_dssp TTCEE----TTBCSCCC-----------CCHHHHHHHHHHHHHHHHHTSCCCH-HHHHHHHHHHHHHH-HT-CCCEECCE
T ss_pred hhceE----CCEEHHHHhhhhcccCCHHHHHHHHHHHHHhhHhHhhCCCccHH-HHHHHHHHHHHHHH-cC-CCcEEEEE
Confidence 99999 999998876432 232 368999999999999999998775 45888999987655 44 89999999
Q ss_pred eecCCCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 021646 249 VYSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAY 305 (309)
Q Consensus 249 v~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~ 305 (309)
++++|+||+ +|+|+|+||++ ++|++++++ ++|+++|+++|++|++.|++.++.+.
T Consensus 261 ~~~~G~yg~-~~~~~~vP~~ig~~Gv~~i~~-~~L~~~e~~~l~~s~~~l~~~~~~~~ 316 (318)
T 1y6j_A 261 TVINGMYGI-EDVAISLPSIVNSEGVQEVLQ-FNLTPEEEEALRFSAEQVKKVLNEVK 316 (318)
T ss_dssp EEECSBTTB-CSEEEECCEEEETTEEEECCC-CCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EeecCccCC-cceEEEEEEEEcCCeeEEEec-CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999 89999999986 999999998 99999999999999999999998654
No 23
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=100.00 E-value=2e-57 Score=420.48 Aligned_cols=274 Identities=20% Similarity=0.294 Sum_probs=246.6
Q ss_pred EEEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHH
Q 021646 14 VILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASA 93 (309)
Q Consensus 14 ~~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~ 93 (309)
.+|+|+|+.+++++++|.++||+|... ..+++.+..++++++++||+||+++|.++++|++|.+++..|+++++++++.
T Consensus 27 ~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~v~~~~~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~ 105 (303)
T 1o6z_A 27 DEVVFVDIPDKEDDTVGQAADTNHGIA-YDSNTRVRQGGYEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSS 105 (303)
T ss_dssp SEEEEECCGGGHHHHHHHHHHHHHHHT-TTCCCEEEECCGGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEcCCCChhhHHHHHHHHHHHHh-hCCCcEEEeCCHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 489999992225678899999999876 4455555545699999999999999999999999999999999999999999
Q ss_pred HhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceeee
Q 021646 94 LEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPD 172 (309)
Q Consensus 94 i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp~ 172 (309)
+.+++ |+++++++|||+|++|++++++ +|+|++| ||.||.||++||++++|++++++|++|++++ |||||++++|+
T Consensus 106 i~~~~-p~~~viv~SNPv~~~~~~~~~~-~~~p~~rviG~gt~Ld~~r~~~~la~~l~v~~~~v~~~v-~G~HG~~~~p~ 182 (303)
T 1o6z_A 106 LDEHN-DDYISLTTSNPVDLLNRHLYEA-GDRSREQVIGFGGRLDSARFRYVLSEEFDAPVQNVEGTI-LGEHGDAQVPV 182 (303)
T ss_dssp HHTTC-SCCEEEECCSSHHHHHHHHHHH-SSSCGGGEEECCHHHHHHHHHHHHHHHHTCCGGGEECCE-EECSSTTEEEC
T ss_pred HHHHC-CCcEEEEeCChHHHHHHHHHHH-cCCCHHHeeecccchhHHHHHHHHHHHhCcCHHHeEEEE-EeCCCCccccC
Confidence 99998 7999999999999999999999 6999998 6888999999999999999999999999874 99999999999
Q ss_pred cCCceeecCCCCcchhhhhcccccchhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCCCCceEEEeeeecC
Q 021646 173 VNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSD 252 (309)
Q Consensus 173 ~S~~~v~~~~~~~pl~~~~~~~~~~~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~~sv~~~ 252 (309)
||++++ +|.| +++.++.| +++.+++++++++|++.||++++ ++|.++++++.++ +++ +++++|+|++++
T Consensus 183 ~s~~~v----~g~p--~~~~~~~~--~~~~~~v~~~g~eii~~kg~~~~-~~a~a~~~~~~ai-~~~-~~~~~~~~~~~~ 251 (303)
T 1o6z_A 183 FSKVSV----DGTD--PEFSGDEK--EQLLGDLQESAMDVIERKGATEW-GPARGVAHMVEAI-LHD-TGEVLPASVKLE 251 (303)
T ss_dssp GGGCEE----TTBC--CCCCHHHH--HHHHHHHHHHHHHHHTTTSSCCH-HHHHHHHHHHHHH-HTT-CCCEEEEEEEEE
T ss_pred Cccccc----CCcC--ccCCHHHH--HHHHHHHHHHhHHHHhcCCChHH-HHHHHHHHHHHHH-HhC-CCCEEEEEEecC
Confidence 999999 8999 66655544 68999999999999999997775 6788999998765 454 799999999999
Q ss_pred CCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 021646 253 GSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLA 304 (309)
Q Consensus 253 g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~ 304 (309)
|+||+ +|+|||+||++ ++|++++++ ++|+++|+++|++|++.|++.++..
T Consensus 252 g~~g~-~~~~~~~P~~ig~~Gv~~i~~-~~l~~~e~~~l~~s~~~l~~~~~~~ 302 (303)
T 1o6z_A 252 GEFGH-EDTAFGVPVSLGSNGVEEIVE-WDLDDYEQDLMADAAEKLSDQYDKI 302 (303)
T ss_dssp SGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCC-cceEEEEEEEEeCCeeEEecC-CCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 99999 89999999986 999999998 9999999999999999999998864
No 24
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=100.00 E-value=5.8e-57 Score=419.71 Aligned_cols=276 Identities=20% Similarity=0.307 Sum_probs=248.6
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASAL 94 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i 94 (309)
+|+|+|++ +++++|.++||.|........+.+..+.++++++||+||+++|.++++|++|.+++.+|+++++++++.+
T Consensus 33 ev~l~Di~--~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i 110 (316)
T 1ldn_A 33 EIVLIDAN--ESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESV 110 (316)
T ss_dssp EEEEECSS--HHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHH
T ss_pred EEEEEeCC--cchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHH
Confidence 89999997 5689999999999764343355555667899999999999999999999999999999999999999999
Q ss_pred hhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceeeec
Q 021646 95 EKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDV 173 (309)
Q Consensus 95 ~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp~~ 173 (309)
.+++ |+++++++|||+|++|++++++ +|+|++| ||.||.||++|+++++|++++++|++|+++ ||||||++++|+|
T Consensus 111 ~~~~-p~a~~iv~tNPv~~~~~~~~~~-s~~p~~rviG~gt~lD~~r~~~~la~~l~v~~~~v~~~-v~G~HG~~~~p~~ 187 (316)
T 1ldn_A 111 MASG-FQGLFLVATNPVDILTYATWKF-SGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAY-IIGEHGDTELPVW 187 (316)
T ss_dssp HHHT-CCSEEEECSSSHHHHHHHHHHH-HTCCGGGEEECTTHHHHHHHHHHHHHHHTSCGGGEEEE-EEBCSSTTCEEEE
T ss_pred HHHC-CCCEEEEeCCchHHHHHHHHHH-hCCCHHHEEecccchHHHHHHHHHHHHhCCCHHHeEEE-EecccCCceeeee
Confidence 9998 7999999999999999999999 6999988 588899999999999999999999999987 5999999999999
Q ss_pred CCceeecCCCCcchhhhhcccc-cc---hhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCCCCceEEEeee
Q 021646 174 NHATVTTSKGEKPVREAVADDN-WL---NTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGV 249 (309)
Q Consensus 174 S~~~v~~~~~~~pl~~~~~~~~-~~---~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~~sv 249 (309)
|++++ +|+|+.+++.+.. |. .+++.+++++++++|++.||++++ ++|.++++++.+ |+++ +++++|+|+
T Consensus 188 s~~~v----~g~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~kg~~~~-~~a~a~~~~~~a-i~~~-~~~~~~~~~ 260 (316)
T 1ldn_A 188 SQAYI----GVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQIIEKKGATYY-GIAMGLARVTRA-ILHN-ENAILTVSA 260 (316)
T ss_dssp EEEEE----TTEESTTTSGGGTTTHHHHHHHHHHHHHHHHHHHHHHHSCCCH-HHHHHHHHHHHH-HHTT-CCEEEEEEE
T ss_pred hhccC----CCEEHHHHhhccccCCHHHHHHHHHHHHHhHHHHHhccCCcHH-HHHHHHHHHHHH-HHhC-CCcEEEEEE
Confidence 99999 9999998865433 32 257889999999999999998875 567889998875 4555 899999999
Q ss_pred ecCCCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 021646 250 YSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLA 304 (309)
Q Consensus 250 ~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~ 304 (309)
+++|+||+ +++|+|+||++ ++|++++++ ++|+++|+++|++|++.|++.++..
T Consensus 261 ~~~g~yg~-~~~~~~vP~~ig~~Gv~~i~~-~~l~~~e~~~l~~s~~~l~~~~~~~ 314 (316)
T 1ldn_A 261 YLDGLYGE-RDVYIGVPAVINRNGIREVIE-IELNDDEKNRFHHSAATLKSVLARA 314 (316)
T ss_dssp EEESTTSC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred EecCccCC-cceEEEEEEEEeCCeeEEEcc-CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 89999999986 999999998 9999999999999999999998864
No 25
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=100.00 E-value=3.9e-57 Score=419.64 Aligned_cols=274 Identities=23% Similarity=0.352 Sum_probs=238.4
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCC--cceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLL--KGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAS 92 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~--~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~ 92 (309)
+++|+|++ +++++|.++||+|...+.. .+++.+ ++++++++||+||+++|.|++||++|.+++.+|+++++++++
T Consensus 28 ~v~L~Di~--~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d~~a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~ 104 (309)
T 1ur5_A 28 DIVLLDIV--EGVPQGKALDLYEASPIEGFDVRVTGT-NNYADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACIS 104 (309)
T ss_dssp EEEEECSS--SSHHHHHHHHHHTTHHHHTCCCCEEEE-SCGGGGTTCSEEEECCCC--------CHHHHHHHHHHHHHHH
T ss_pred eEEEEeCC--ccHHHHHHHhHHHhHhhcCCCeEEEEC-CCHHHHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 49999997 5789999999999764332 234443 456999999999999999999999999999999999999999
Q ss_pred HHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceee
Q 021646 93 ALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYP 171 (309)
Q Consensus 93 ~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp 171 (309)
.+.++| |+++++++|||+|++|++++++ +|+|++| ||.||.||++|+++++|++++++|++|+++ ||||||++++|
T Consensus 105 ~i~~~~-p~a~vi~~tNPv~~~t~~~~~~-~~~~~~rviG~gt~LD~~r~~~~la~~lgv~~~~v~~~-v~G~Hg~t~~p 181 (309)
T 1ur5_A 105 QAAPLS-PNAVIIMVNNPLDAMTYLAAEV-SGFPKERVIGQAGVLDAARYRTFIAMEAGVSVEDVQAM-LMGGHGDEMVP 181 (309)
T ss_dssp HHGGGC-TTCEEEECCSSHHHHHHHHHHH-HCCCGGGEEECCHHHHHHHHHHHHHHHHTCCGGGEEEC-CEECSGGGEEC
T ss_pred HHHhhC-CCeEEEEcCCchHHHHHHHHHH-cCCCHHHEEECCcchHHHHHHHHHHHHhCCChhheeEE-EecCcCCceee
Confidence 999999 7999999999999999999999 7999988 688899999999999999999999999988 59999999999
Q ss_pred ecCCceeecCCCCcchhhhhcccccchhHHHHHHHhhHHHHHh--cCCcChHHHHHHHHHHHHHHHHhCCCCceEEEeee
Q 021646 172 DVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIK--ARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGV 249 (309)
Q Consensus 172 ~~S~~~v~~~~~~~pl~~~~~~~~~~~~el~~~v~~~~~~i~~--~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~~sv 249 (309)
+||++++ +|.|+.+++.++.+ +++.+++++++++|++ .||++. +++|.++++++.+ |+++ +++++|+|+
T Consensus 182 ~~s~~~v----~g~~~~~~~~~~~~--~~~~~~v~~~g~eii~~~~kgs~~-~~~a~a~~~~~~a-i~~~-~~~~~~~~~ 252 (309)
T 1ur5_A 182 LPRFSCI----SGIPVSEFIAPDRL--AQIVERTRKGGGEIVNLLKTGSAY-YAPAAATAQMVEA-VLKD-KKRVMPVAA 252 (309)
T ss_dssp CGGGEEE----TTEEGGGTSCHHHH--HHHHHHHHTHHHHHHHHHSSCCCC-HHHHHHHHHHHHH-HHTT-CCEEEEEEE
T ss_pred eeeccee----CCEeHHHHcCHhHH--HHHHHHHHhhhHHhhhhccCCCcH-HHHHHHHHHHHHH-HHcC-CCcEEEEEE
Confidence 9999999 99999988765554 6899999999999999 788554 5778899998875 5555 899999999
Q ss_pred ecCCCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 021646 250 YSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAY 305 (309)
Q Consensus 250 ~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~ 305 (309)
+++|+||+ +++|||+||++ ++|++++++ ++|+++|+++|++|++.|++.+++..
T Consensus 253 ~~~g~~g~-~~~~~~vP~~ig~~Gv~~i~~-~~l~~~e~~~l~~s~~~l~~~~~~~~ 307 (309)
T 1ur5_A 253 YLTGQYGL-NDIYFGVPVILGAGGVEKILE-LPLNEEEMALLNASAKAVRATLDTLK 307 (309)
T ss_dssp EEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EecCccCC-cceEEEEEEEEeCCceEEecC-CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999 89999999986 999999998 99999999999999999999998764
No 26
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=100.00 E-value=1.8e-55 Score=409.11 Aligned_cols=278 Identities=21% Similarity=0.317 Sum_probs=241.4
Q ss_pred eEEEEEEecCCccchhhHHHHHHhhccCCCCcceeecCC---hhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHH
Q 021646 13 PVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTD---VVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKA 89 (309)
Q Consensus 13 ~~~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~---~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~ 89 (309)
..+|+|+|+.+++++++|+++||+|+.......+.+..+ .+++++|||+||+++|.++++|++|.+++..|++++++
T Consensus 26 ~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~ 105 (313)
T 1hye_A 26 MKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGK 105 (313)
T ss_dssp CCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHH
Confidence 358999999222567899999999976332244444432 48999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCc
Q 021646 90 QASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSST 168 (309)
Q Consensus 90 i~~~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s 168 (309)
+++.++++| +++++++|||+|++|++++++ +|+|++| ||.||.||++|+++++|++++++|++|++++ |||||++
T Consensus 106 i~~~i~~~~--~~~vlv~SNPv~~~t~~~~k~-~~~p~~rviG~gt~LD~~r~~~~la~~lgv~~~~v~~~v-~G~Hg~~ 181 (313)
T 1hye_A 106 YAKKIAEIC--DTKIFVITNPVDVMTYKALVD-SKFERNQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRTRI-IGEHGDS 181 (313)
T ss_dssp HHHHHHHHC--CCEEEECSSSHHHHHHHHHHH-HCCCTTSEEECTTHHHHHHHHHHHHHHHTCCGGGEECCE-EECSSTT
T ss_pred HHHHHHHhC--CeEEEEecCcHHHHHHHHHHh-hCcChhcEEEeCccHHHHHHHHHHHHHhCcCHHHeEEEE-eeccCCc
Confidence 999999997 899999999999999999999 7999988 5888999999999999999999999999885 9999999
Q ss_pred eeeecCCceeecCCCCcchhhhh--cccccchhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCCCCceEEE
Q 021646 169 QYPDVNHATVTTSKGEKPVREAV--ADDNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVS 246 (309)
Q Consensus 169 ~vp~~S~~~v~~~~~~~pl~~~~--~~~~~~~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~ 246 (309)
++|+||++++ +|+|+.+++ .++. .+++.+++++++++|++.||++. +++|.++++++.++ +++ +++++|
T Consensus 182 ~~p~~s~~~v----~g~~~~~~~~~~~~~--~~~~~~~v~~~g~eii~~kgs~~-~~~a~a~~~~~~ai-~~~-~~~~~~ 252 (313)
T 1hye_A 182 MVPLLSATSI----GGIPIQKFERFKELP--IDEIIEDVKTKGEQIIRLKGGSE-FGPAAAILNVVRCI-VNN-EKRLLT 252 (313)
T ss_dssp EEECGGGCEE----TTEEGGGCGGGGGCC--HHHHHHHHHHHTTSCCC-------CCHHHHHHHHHHHH-HTT-CCEEEE
T ss_pred ccceeecccc----CCEEHHHHhcCCHHH--HHHHHHHHHhccceeecCCCCcH-HHHHHHHHHHHHHH-HcC-CCeEEE
Confidence 9999999999 999999874 4443 36899999999999999999554 56788899988754 455 899999
Q ss_pred eeeecCCCC-CCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 021646 247 MGVYSDGSY-GIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAY 305 (309)
Q Consensus 247 ~sv~~~g~y-gi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~ 305 (309)
+|++++|+| |+ +++|||+||++ ++|++++++ ++|+++|+++|++|++.|++.++...
T Consensus 253 ~~~~~~g~~~g~-~~~~~~~P~~ig~~Gv~~i~~-~~l~~~e~~~l~~s~~~l~~~~~~~~ 311 (313)
T 1hye_A 253 LSAYVDGEFDGI-RDVCIGVPVKIGRDGIEEVVS-IELDKDEIIAFRKSAEIIKKYCEEVK 311 (313)
T ss_dssp EEEEEESSSSSC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeecceecCc-cceEEEEEEEEeCCeeEEecC-CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999 99 89999999986 999999998 99999999999999999999998764
No 27
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=100.00 E-value=5.5e-55 Score=407.21 Aligned_cols=274 Identities=20% Similarity=0.294 Sum_probs=244.7
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCC--CcceeecCChhhhcCCCcEEEEeCCCCCCCCCC-----HHHHHHHhHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPL--LKGVVATTDVVEACKDVNIAVMVGGFPRKEGME-----RKDVMSKNVSIY 87 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~--~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~s-----r~~~~~~N~~i~ 87 (309)
+++|+|++ +++++|.++|++|...+. ..+++.++ +++++++||+||+++|.|+++|++ |.+++.+|++++
T Consensus 30 ~v~L~Di~--~~~l~~~~~~l~~~~~~~~~~~~i~~t~-d~~al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~ 106 (322)
T 1t2d_A 30 DVVLFDIV--KNMPHGKALDTSHTNVMAYSNCKVSGSN-TYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIM 106 (322)
T ss_dssp EEEEECSS--SSHHHHHHHHHHTHHHHHTCCCCEEEEC-CGGGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHH
T ss_pred eEEEEeCC--HHHHHHHHHHHHhhhhhcCCCcEEEECC-CHHHhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHH
Confidence 49999997 578999999999975332 23444444 469999999999999999999999 999999999999
Q ss_pred HHHHHHHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecC
Q 021646 88 KAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHS 166 (309)
Q Consensus 88 ~~i~~~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG 166 (309)
+++++.|.++| |+++++++|||+|++|+++++. +|||++| ||.||.||++||++++|++++++|++|+++ ||||||
T Consensus 107 ~~i~~~i~~~~-p~a~iiv~tNP~~~~t~~~~~~-~g~~~~rviG~gt~ld~~R~~~~la~~lgv~~~~v~~~-v~G~HG 183 (322)
T 1t2d_A 107 IEIGGHIKKNC-PNAFIIVVTNPVDVMVQLLHQH-SGVPKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAH-IVGAHG 183 (322)
T ss_dssp HHHHHHHHHHC-TTSEEEECSSSHHHHHHHHHHH-HCCCGGGEEECCHHHHHHHHHHHHHHHHTSCGGGEECC-EEBCSS
T ss_pred HHHHHHHHHHC-CCeEEEEecCChHHHHHHHHHh-cCCChHHEEeccCcccHHHHHHHHHHHhCCCHHHeEEE-EEcCCC
Confidence 99999999999 7999999999999999999999 7999988 688899999999999999999999999988 599999
Q ss_pred CceeeecCCceeecCCCCcchhhhhcccccc----hhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCCCCc
Q 021646 167 STQYPDVNHATVTTSKGEKPVREAVADDNWL----NTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKG 242 (309)
Q Consensus 167 ~s~vp~~S~~~v~~~~~~~pl~~~~~~~~~~----~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~~~~ 242 (309)
++++|+||++++ +|+|+.+++.+. |. .+++.+++++++++|++.||++. +++|.++++++.+ |+++ ++
T Consensus 184 ~~~~p~~s~~~v----~g~~~~~~~~~~-~~~~~~~~~~~~~v~~~g~eii~~kgs~~-~~~a~a~~~~~~a-i~~~-~~ 255 (322)
T 1t2d_A 184 NKMVLLKRYITV----GGIPLQEFINNK-LISDAELEAIFDRTVNTALEIVNLHASPY-VAPAAAIIEMAES-YLKD-LK 255 (322)
T ss_dssp TTCEECGGGCEE----TTEEHHHHHHTT-SSCHHHHHHHHHHHHTHHHHHHHHTSSCC-HHHHHHHHHHHHH-HHTT-CC
T ss_pred CcEEeeHHHceE----CcEeHHHhcccc-CCCHHHHHHHHHHHHHHHHHHHhccCchH-HHHHHHHHHHHHH-HHhC-CC
Confidence 999999999999 999999886433 32 35788999999999999999554 5778899998875 4555 89
Q ss_pred eEEEeeeecCCCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 021646 243 TWVSMGVYSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLA 304 (309)
Q Consensus 243 ~v~~~sv~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~ 304 (309)
+++|+|++++|+||+ +++|||+||++ ++|++++++ ++|+++|+++|++|++.|+++++.+
T Consensus 256 ~v~~~s~~~~g~~g~-~~~~~~vP~~ig~~Gv~~i~~-~~l~~~e~~~l~~s~~~L~~~~~~~ 316 (322)
T 1t2d_A 256 KVLICSTLLEGQYGH-SDIFGGTPVVLGANGVEQVIE-LQLNSEEKAKFDEAIAETKRMKALA 316 (322)
T ss_dssp EEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CEEEEEEEecCccCC-CceEEEEEEEEeCCeeEEeCC-CCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999 89999999986 999999998 9999999999999999999998865
No 28
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=100.00 E-value=9.6e-54 Score=395.38 Aligned_cols=258 Identities=17% Similarity=0.237 Sum_probs=222.2
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASAL 94 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i 94 (309)
+|+|+|++ ++ +.|.++||.|... ++++.++ ++++++|||+||+++|.+ +||++|.|++.+|+++++++++.+
T Consensus 41 ev~L~Di~--~~-~~g~a~dl~~~~~---~~i~~t~-d~~~l~~aD~Vi~aag~~-~pG~tR~dl~~~n~~i~~~i~~~i 112 (303)
T 2i6t_A 41 RLVLLDLS--EG-TKGATMDLEIFNL---PNVEISK-DLSASAHSKVVIFTVNSL-GSSQSYLDVVQSNVDMFRALVPAL 112 (303)
T ss_dssp EEEEECCC--------CHHHHHHHTC---TTEEEES-CGGGGTTCSEEEECCCC-----CCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCC--cc-hHHHHHHHhhhcC---CCeEEeC-CHHHHCCCCEEEEcCCCC-CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 89999997 44 8899999999543 2666654 579999999999999996 899999999999999999999999
Q ss_pred hhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceeeec
Q 021646 95 EKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDV 173 (309)
Q Consensus 95 ~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp~~ 173 (309)
.++| |+++++++|||+|+||++++++ +|+|++| ||.||.||++||++++|++++++|++|++++ |||||++++|+|
T Consensus 113 ~~~~-p~a~iiv~sNP~~~~t~~~~~~-~~~p~~rviG~gt~Ld~~R~~~~la~~lgv~~~~v~~~v-~G~Hg~s~~p~~ 189 (303)
T 2i6t_A 113 GHYS-QHSVLLVASQPVEIMTYVTWKL-STFPANRVIGIGCNLDSQRLQYIITNVLKAQTSGKEVWV-IGEQGEDKVLTW 189 (303)
T ss_dssp HHHT-TTCEEEECSSSHHHHHHHHHHH-HCCCGGGEEECTTHHHHHHHHHHHHHTSCCTTGGGGEEE-EBSCSSSCEEEE
T ss_pred HHhC-CCeEEEEcCChHHHHHHHHHHh-cCCCHHHeeCCCCCchHHHHHHHHHHHcCCChHHeEEEE-ecCCCCCccccc
Confidence 9999 7999999999999999999999 7999998 5888999999999999999999999999885 899999999999
Q ss_pred CCceeecCCCCcchhhhhcccccchhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCCCCceEEEeeeecCC
Q 021646 174 NHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDG 253 (309)
Q Consensus 174 S~~~v~~~~~~~pl~~~~~~~~~~~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~~sv~~~g 253 (309)
|+... |..+++.+++++++++|++.||++ ++++|.++++++.+ |+++ +++++|+|++.+|
T Consensus 190 s~~~~-----------------~~~~~~~~~~~~~g~eii~~kGst-~~~~a~a~~~i~~a-i~~~-~~~~~~vs~~~~g 249 (303)
T 2i6t_A 190 SGQEE-----------------VVSHTSQVQLSNRAMELLRVKGQR-SWSVGLSVADMVDS-IVNN-KKKVHSVSALAKG 249 (303)
T ss_dssp BCSSC-----------------CCCHHHHHHHHHHHHTTSSSCCCC-HHHHHHHHHHHHHH-HHTT-CCEEEEEEEECTT
T ss_pred ccccc-----------------ccHHHHHHHHHHHHHHHHHccCch-HHhHHHHHHHHHHH-HHcC-CCcEEEEEEEeCC
Confidence 98411 223578888999999999999955 46788899998875 5555 7899999999999
Q ss_pred CCCCCCceEEEEeEEe-cCCcEEEeCCC-CCCHHHHHHHHHHHHHHHHHHHHH
Q 021646 254 SYGIPEGLIYSFPVTC-EKGEWSIVKGL-KVDEFSRAKMDATAEELAEEKTLA 304 (309)
Q Consensus 254 ~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~-~L~~~E~~~l~~s~~~i~~~i~~~ 304 (309)
+||+|+++|||+||++ ++|++++++ + +|+++|+++|++|++.|++.++..
T Consensus 250 ~yg~~~~~~~~vP~~ig~~Gv~~i~~-~~~l~~~e~~~l~~s~~~l~~~~~~~ 301 (303)
T 2i6t_A 250 YYDINSEVFLSLPCILGTNGVSEVIK-TTLKEDTVTEKLQSSASSIHSLQQQL 301 (303)
T ss_dssp STTCCSCCEEEEEEEEETTEEEEECC-BCC-CCHHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCCCCeEEEEEEEEECCccEEecC-CCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999889999999986 999999988 6 799999999999999999998753
No 29
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=100.00 E-value=1.2e-53 Score=396.33 Aligned_cols=276 Identities=22% Similarity=0.336 Sum_probs=244.4
Q ss_pred EEEEEEecCCccchhhHHHHHHhhccCCC--CcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHH
Q 021646 14 VILHMLDIEPAAEALNGVKMELIDAAFPL--LKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQA 91 (309)
Q Consensus 14 ~~l~L~D~~~~~~~~~g~~~DL~~~~~~~--~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~ 91 (309)
.+++|+|++ +++++|.++|+.|...+. ..++..++ +++++++||+||++.+.|++||++|.+++..|++++++++
T Consensus 26 ~~V~l~D~~--~~~~~~~~~~l~~~~~~~~~~~~i~~t~-d~~~l~~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~ 102 (310)
T 1guz_A 26 RELVLLDVV--EGIPQGKALDMYESGPVGLFDTKVTGSN-DYADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVT 102 (310)
T ss_dssp SEEEEECSS--SSHHHHHHHHHHTTHHHHTCCCEEEEES-CGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCC--hhHHHHHHHhHHhhhhcccCCcEEEECC-CHHHHCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 378999997 568999999999874322 22344433 4567999999999999999999999999999999999999
Q ss_pred HHHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCcee
Q 021646 92 SALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQY 170 (309)
Q Consensus 92 ~~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~v 170 (309)
+.+.+++ |+++++++|||+|.++++++++ +++|++| ||+||.||++|+++++|++++++|++|+++ |||+||++++
T Consensus 103 ~~i~~~~-~~~~viv~tNP~~~~~~~~~~~-~~~~~~rviG~gt~ld~~r~~~~la~~l~v~~~~v~~~-v~G~Hg~~~~ 179 (310)
T 1guz_A 103 DNIMKHS-KNPIIIVVSNPLDIMTHVAWVR-SGLPKERVIGMAGVLDAARFRSFIAMELGVSMQDINAC-VLGGHGDAMV 179 (310)
T ss_dssp HHHHHHC-SSCEEEECCSSHHHHHHHHHHH-HCSCGGGEEEECHHHHHHHHHHHHHHHHTCCGGGEECC-EEECSGGGEE
T ss_pred HHHHHhC-CCcEEEEEcCchHHHHHHHHHh-cCCChHHEEECCCchHHHHHHHHHHHHhCCCHHHeEEE-EEcccCCcEe
Confidence 9999998 7999999999999999999999 7999988 688899999999999999999999999987 5999999999
Q ss_pred eecCCceeecCCCCcchhhhhcccccchhHHHHHHHhhHHHHHh--cCCcChHHHHHHHHHHHHHHHHhCCCCceEEEee
Q 021646 171 PDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIK--ARKLSSALSAASSACDHIRDWVLGTPKGTWVSMG 248 (309)
Q Consensus 171 p~~S~~~v~~~~~~~pl~~~~~~~~~~~~el~~~v~~~~~~i~~--~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~~s 248 (309)
|+||++++ +|+|+.+++.++.+ +++.+++++++++|++ .||++. +++|.++++++.+ |+++ +++++|+|
T Consensus 180 p~~s~~~v----~g~~~~~~~~~~~~--~~~~~~v~~~g~~ii~~~~kgs~~-~~~a~a~~~~~~a-i~~~-~~~~~~~~ 250 (310)
T 1guz_A 180 PVVKYTTV----AGIPISDLLPAETI--DKLVERTRNGGAEIVEHLKQGSAF-YAPASSVVEMVES-IVLD-RKRVLPCA 250 (310)
T ss_dssp ECGGGCEE----TTEEHHHHSCHHHH--HHHHHHHHTHHHHHHHHHSSSCCC-HHHHHHHHHHHHH-HHTT-CCEEEEEE
T ss_pred eeeecccC----CCEEHHHHCCHHHH--HHHHHHHHHhHHHHHhhcCCCCcH-HHHHHHHHHHHHH-HHcC-CCcEEEEE
Confidence 99999999 99999998765554 6899999999999999 788554 5778899998875 4555 89999999
Q ss_pred eecCCCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 021646 249 VYSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAYS 306 (309)
Q Consensus 249 v~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~~ 306 (309)
++++|+||+ +++|||+||++ ++|++++++ ++|+++|+++|++|++.|++.++.+.+
T Consensus 251 ~~~~g~~g~-~~~~~~~P~~ig~~Gv~~i~~-~~l~~~e~~~l~~s~~~l~~~~~~~~~ 307 (310)
T 1guz_A 251 VGLEGQYGI-DKTFVGVPVKLGRNGVEQIYE-INLDQADLDLLQKSAKIVDENCKMLES 307 (310)
T ss_dssp EEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHTC--
T ss_pred EeecCccCC-cceEEEEEEEEeCCeeEEEcC-CCCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999 89999999986 999999998 999999999999999999999986554
No 30
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=100.00 E-value=1.7e-53 Score=398.18 Aligned_cols=275 Identities=21% Similarity=0.309 Sum_probs=244.4
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCC--CcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPL--LKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAS 92 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~--~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~ 92 (309)
+++|+|++ +++++|.++|++|...+. ..+++.++ +++++++||+||+++|.|++||++|.|++.+|+++++++++
T Consensus 40 ~V~L~Di~--~~~l~~~~~~l~~~~~~~~~~~~i~~t~-d~~al~~aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~ 116 (328)
T 2hjr_A 40 DVYMFDII--EGVPQGKALDLNHCMALIGSPAKIFGEN-NYEYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAE 116 (328)
T ss_dssp EEEEECSS--TTHHHHHHHHHHHHHHHHTCCCCEEEES-CGGGGTTCSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHH
T ss_pred eEEEEECC--HHHHHHHHHHHHhHhhccCCCCEEEECC-CHHHHCCCCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHH
Confidence 49999997 578999999999976432 23455544 45899999999999999999999999999999999999999
Q ss_pred HHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceee
Q 021646 93 ALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYP 171 (309)
Q Consensus 93 ~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp 171 (309)
.|.++| |+++++++|||+|++|+++++. +||||+| ||.||.|||+||++++|++++++|++|+++ ||||||++++|
T Consensus 117 ~i~~~~-p~a~viv~tNP~~~~t~~~~~~-~~~~~~rviG~~t~Ld~~R~~~~la~~lgv~~~~v~~~-v~G~Hg~t~~p 193 (328)
T 2hjr_A 117 NVGKYC-PNAFVICITNPLDAMVYYFKEK-SGIPANKVCGMSGVLDSARFRCNLSRALGVKPSDVSAI-VVGGHGDEMIP 193 (328)
T ss_dssp HHHHHC-TTCEEEECCSSHHHHHHHHHHH-HCCCGGGEEESCHHHHHHHHHHHHHHHHTSCGGGEECC-EEBCSSTTCEE
T ss_pred HHHHHC-CCeEEEEecCchHHHHHHHHHh-cCCChhhEEEeCcHHHHHHHHHHHHHHhCCCHHHeeEE-EecCCCCceee
Confidence 999999 7999999999999999999998 7999998 588899999999999999999999999988 59999999999
Q ss_pred ecCCceeecCCCCcchhhhhcccccch----hHHHHHHHhhHHHHHh--cCCcChHHHHHHHHHHHHHHHHhCCCCceEE
Q 021646 172 DVNHATVTTSKGEKPVREAVADDNWLN----TEFITTVQQRGAAIIK--ARKLSSALSAASSACDHIRDWVLGTPKGTWV 245 (309)
Q Consensus 172 ~~S~~~v~~~~~~~pl~~~~~~~~~~~----~el~~~v~~~~~~i~~--~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~ 245 (309)
+||++++ +|+|+.+++.+ .|.. +++.+++++++++|++ .||++. +++|.++++++.+ |+++ +++++
T Consensus 194 ~~s~~~v----~G~~~~~~~~~-~~~~~~~~~~~~~~v~~~g~eii~~~~~gs~~-~~~a~a~~~i~~a-i~~~-~~~v~ 265 (328)
T 2hjr_A 194 LTSSVTI----GGILLSDFVEQ-GKITHSQINEIIKKTAFGGGEIVELLKTGSAF-YAPAASAVAMAQA-YLKD-SKSVL 265 (328)
T ss_dssp CGGGCEE----TTEEHHHHHHT-TSSCHHHHHHHHHHHHTHHHHHHHHHSSCCCC-HHHHHHHHHHHHH-HHTT-CCEEE
T ss_pred eeeeceE----CCEEHHHHhhc-cCCCHHHHHHHHHHHHhhHHHHHhhhCCCchH-HHHHHHHHHHHHH-HHcC-CCcEE
Confidence 9999999 99999988654 3322 5688889999999999 577555 5778899998875 5555 78999
Q ss_pred EeeeecCCCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 021646 246 SMGVYSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAY 305 (309)
Q Consensus 246 ~~sv~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~ 305 (309)
|+|++++|+||+ +|+|+|+||++ ++|++++++ ++|+++|+++|++|++.|++.++.+.
T Consensus 266 ~~~v~~~G~~g~-~~~~~~vP~~ig~~Gv~~i~~-~~L~~~e~~~l~~s~~~l~~~~~~~~ 324 (328)
T 2hjr_A 266 VCSTYLTGQYNV-NNLFVGVPVVIGKNGIEDVVI-VNLSDDEKSLFSKSVESIQNLVQDLK 324 (328)
T ss_dssp EEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeecCccCC-CceEEEEEEEEeCCeeEEecC-CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 89999999986 999999997 89999999999999999999998775
No 31
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=100.00 E-value=3.9e-53 Score=391.98 Aligned_cols=269 Identities=19% Similarity=0.290 Sum_probs=212.9
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASAL 94 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i 94 (309)
+++|+|++ +++++|.++|+.|... ......+..++++++++||+||+++|.+++||++|.|++.+|+++++++++.+
T Consensus 27 eV~L~D~~--~~~~~~~~~~l~~~~~-~~~~~~i~~~~~~a~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i 103 (304)
T 2v6b_A 27 ELVLVDRD--EDRAQAEAEDIAHAAP-VSHGTRVWHGGHSELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQI 103 (304)
T ss_dssp EEEEECSS--HHHHHHHHHHHTTSCC-TTSCCEEEEECGGGGTTCSEEEECC------------CHHHHHHHHHHHHHHH
T ss_pred EEEEEeCC--HHHHHHHHHhhhhhhh-hcCCeEEEECCHHHhCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHH
Confidence 79999997 5788999999999873 32344443346789999999999999999999999999999999999999999
Q ss_pred hhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceeeec
Q 021646 95 EKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDV 173 (309)
Q Consensus 95 ~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp~~ 173 (309)
.+++ |+++++++|||+|++++++++.+ |++| ||+||.||++|+++++|++++++|++|+++ ||||||++++|+|
T Consensus 104 ~~~~-p~~~vi~~tNP~~~~~~~~~~~~---~~~rviG~gt~Ld~~r~~~~la~~l~v~~~~v~~~-v~G~Hg~~~~p~~ 178 (304)
T 2v6b_A 104 TRAA-PDAVLLVTSNPVDLLTDLATQLA---PGQPVIGSGTVLDSARFRHLMAQHAGVDGTHAHGY-VLGEHGDSEVLAW 178 (304)
T ss_dssp HHHC-SSSEEEECSSSHHHHHHHHHHHS---CSSCEEECTTHHHHHHHHHHHHHHHTSCGGGEECC-EEESSSTTEEECG
T ss_pred HHhC-CCeEEEEecCchHHHHHHHHHhC---ChhcEEeCCcCchHHHHHHHHHHHhCcCHHHceEE-EecCCCCceeeeh
Confidence 9998 79999999999999999999994 7777 588899999999999999999999999997 5999999999999
Q ss_pred CCceeecCCCCcchhhhhcccc--c---chhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCCCCceEEEee
Q 021646 174 NHATVTTSKGEKPVREAVADDN--W---LNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMG 248 (309)
Q Consensus 174 S~~~v~~~~~~~pl~~~~~~~~--~---~~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~~s 248 (309)
|++++ +|+|+.+++.+.. | ..+++.+++++++++|++.||++++ ++|.++++++.++ +++ +++++|+|
T Consensus 179 s~~~v----~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~eii~~kg~t~~-~~a~a~~~~~~ai-~~~-~~~~~~~~ 251 (304)
T 2v6b_A 179 SSAMV----AGMPVADFMQAQNLPWNEQVRAKIDEGTRNAAASIIEGKRATYY-GIGAALARITEAV-LRD-RRAVLTVS 251 (304)
T ss_dssp GGCEE----TTEEHHHHHHHHTCCCSHHHHHHHHHHHTC-----------CCH-HHHHHHHHHHHHH-HTT-CCEEEEEE
T ss_pred hHccC----CCEEHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhccCCcHH-HHHHHHHHHHHHH-HhC-CCcEEEEE
Confidence 99999 9999998865432 3 2357999999999999999998775 5588999988754 555 89999999
Q ss_pred eecCCCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 021646 249 VYSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLA 304 (309)
Q Consensus 249 v~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~ 304 (309)
++++| || +|||+||++ ++|++++++ ++|+++|+++|++|++.|++.++..
T Consensus 252 ~~~~g-yg----~~~~~P~~ig~~Gv~~i~~-~~l~~~e~~~l~~s~~~l~~~~~~~ 302 (304)
T 2v6b_A 252 APTPE-YG----VSLSLPRVVGRQGVLSTLH-PKLTGDEQQKLEQSAGVLRGFKQQL 302 (304)
T ss_dssp EEETT-TT----EEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHC-----
T ss_pred EEECC-cC----cEEEEEEEEeCCeeEEEcC-CCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 99999 96 899999986 999999998 9999999999999999999988764
No 32
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=100.00 E-value=8.3e-53 Score=393.97 Aligned_cols=277 Identities=18% Similarity=0.311 Sum_probs=245.0
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCC--CcceeecCChhhhcCCCcEEEEeCCCCCCCCC-----CHHHHHHHhHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPL--LKGVVATTDVVEACKDVNIAVMVGGFPRKEGM-----ERKDVMSKNVSIY 87 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~--~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~-----sr~~~~~~N~~i~ 87 (309)
+++|+|++ ++++++.++|++|...+. ..+++.+++..+++++||+||+++|.|+++|+ +|.+++..|++++
T Consensus 35 ~V~L~D~~--~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~ 112 (331)
T 1pzg_A 35 DVVLYDVV--KGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKII 112 (331)
T ss_dssp EEEEECSS--SSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHH
T ss_pred eEEEEECC--hhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHH
Confidence 48999997 578999999999976332 23455555555589999999999999999999 9999999999999
Q ss_pred HHHHHHHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecC
Q 021646 88 KAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHS 166 (309)
Q Consensus 88 ~~i~~~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG 166 (309)
+++++.|.++| |+++++++|||+|++|+++++. +|+|++| ||.||.||++||++++|++++++|++|++++ ||+||
T Consensus 113 ~~i~~~i~~~~-p~a~vi~~tNP~~~~t~~~~~~-~~~~~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~~v-~G~Hg 189 (331)
T 1pzg_A 113 REIGQNIKKYC-PKTFIIVVTNPLDCMVKVMCEA-SGVPTNMICGMACMLDSGRFRRYVADALSVSPRDVQATV-IGTHG 189 (331)
T ss_dssp HHHHHHHHHHC-TTCEEEECCSSHHHHHHHHHHH-HCCCGGGEEECCHHHHHHHHHHHHHHHHTSCGGGEECCE-EBCSS
T ss_pred HHHHHHHHHHC-CCcEEEEEcCchHHHHHHHHHh-cCCChhcEEeccchHHHHHHHHHHHHHhCCCHHHceEEE-ecCCC
Confidence 99999999999 7999999999999999999999 7999988 6888999999999999999999999999885 99999
Q ss_pred CceeeecCCceeecCCCCcchhhhhcccccc----hhHHHHHHHhhHHHHHh--cCCcChHHHHHHHHHHHHHHHHhCCC
Q 021646 167 STQYPDVNHATVTTSKGEKPVREAVADDNWL----NTEFITTVQQRGAAIIK--ARKLSSALSAASSACDHIRDWVLGTP 240 (309)
Q Consensus 167 ~s~vp~~S~~~v~~~~~~~pl~~~~~~~~~~----~~el~~~v~~~~~~i~~--~kg~t~~~~~a~a~~~~i~~~i~~~~ 240 (309)
++++|+||++++ +|+|+.+++.+ .|. .+++.+++++++++|++ .||++ ++++|.++++++.+ |+++
T Consensus 190 ~~~~p~~s~~~v----~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~eii~~~~kgst-~~~~a~a~~~ii~a-i~~~- 261 (331)
T 1pzg_A 190 DCMVPLVRYITV----NGYPIQKFIKD-GVVTEKQLEEIAEHTKVSGGEIVRFLGQGSA-YYAPAASAVAMATS-FLND- 261 (331)
T ss_dssp TTCEECGGGCEE----TTEEHHHHHHT-TSSCHHHHHHHHHHHHHHHHHHHHHHSSSCC-CHHHHHHHHHHHHH-HHTT-
T ss_pred CCEeeeeecceE----CCEEHHHHhhc-ccCCHHHHHHHHHHHHhccHHHHHhhcCCCc-cchHHHHHHHHHHH-HHhC-
Confidence 999999999999 99999988643 232 25688889999999999 78854 46778899998875 5565
Q ss_pred CceEEEeeeecCCCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 021646 241 KGTWVSMGVYSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAYS 306 (309)
Q Consensus 241 ~~~v~~~sv~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~~ 306 (309)
+++++|+|++++|+||+ +++|+|+||++ ++|++++++ ++|+++|+++|++|++.|++.++....
T Consensus 262 ~~~~~~~~v~~~G~~g~-~~~~~~vP~~vg~~Gv~~i~~-~~L~~~e~~~l~~s~~~l~~~~~~~~~ 326 (331)
T 1pzg_A 262 EKRVIPCSVYCNGEYGL-KDMFIGLPAVIGGAGIERVIE-LELNEEEKKQFQKSVDDVMALNKAVAA 326 (331)
T ss_dssp CCEEEEEEEEEESGGGC-EEEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEEEecCccCC-CceEEEEEEEEeCCeeEEecC-CCCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 89999999999999999 89999999986 999999998 899999999999999999999987643
No 33
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=100.00 E-value=6.3e-51 Score=378.64 Aligned_cols=272 Identities=21% Similarity=0.308 Sum_probs=229.5
Q ss_pred eEEEEEEecCCccchhhHHHHHHhhccCCCCcceeec--CChh-hhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHH
Q 021646 13 PVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVAT--TDVV-EACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKA 89 (309)
Q Consensus 13 ~~~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~--~~~~-~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~ 89 (309)
..+|+|+|+++ ++|+++||+|...+. .+... ++++ +++++||+||+++|.++++|++|.+++..|++++++
T Consensus 26 ~~ev~L~Di~~----~~~~a~dL~~~~~~~--~l~~~~~t~d~~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~ 99 (314)
T 1mld_A 26 VSRLTLYDIAH----TPGVAADLSHIETRA--TVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVAT 99 (314)
T ss_dssp CSEEEEEESSS----HHHHHHHHTTSSSSC--EEEEEESGGGHHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHH
T ss_pred CcEEEEEeCCc----cHHHHHHHhccCcCc--eEEEecCCCCHHHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHH
Confidence 35899999972 689999999977432 34432 2344 479999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCcEEEEecCchhHHHH----HHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeec
Q 021646 90 QASALEKHAAPNCKVLVVANPANTNAL----ILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNH 165 (309)
Q Consensus 90 i~~~i~~~~~p~~~vivvsnPvd~~t~----~~~~~~~~~~~~~ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~Geh 165 (309)
+++.|.+++ |+++++++|||+|++|+ ++++. ++||++|+.+.|.||++|+++++|+++|++|++|++++ ||||
T Consensus 100 i~~~i~~~~-p~a~viv~sNPv~~~~~i~~~~~~~~-~~~p~~rvig~t~Ld~~r~~~~la~~l~v~~~~v~~~v-~G~H 176 (314)
T 1mld_A 100 LTAACAQHC-PDAMICIISNPVNSTIPITAEVFKKH-GVYNPNKIFGVTTLDIVRANAFVAELKGLDPARVSVPV-IGGH 176 (314)
T ss_dssp HHHHHHHHC-TTSEEEECSSCHHHHHHHHHHHHHHT-TCCCTTSEEECCHHHHHHHHHHHHHHTTCCGGGCBCCE-EECS
T ss_pred HHHHHHhhC-CCeEEEEECCCcchhHHHHHHHHHHc-CCCCcceEEEeecccHHHHHHHHHHHhCcChHhEEEEE-ccCC
Confidence 999999999 79999999999999995 45555 78999995333999999999999999999999999885 9999
Q ss_pred -CCceeeecCCceeecCCCCcchhhhhcccccchhHHHHHHHhhHHHHHhcC---CcChHHHHHHHHHHHHHHHHhCCC-
Q 021646 166 -SSTQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKAR---KLSSALSAASSACDHIRDWVLGTP- 240 (309)
Q Consensus 166 -G~s~vp~~S~~~v~~~~~~~pl~~~~~~~~~~~~el~~~v~~~~~~i~~~k---g~t~~~~~a~a~~~~i~~~i~~~~- 240 (309)
|++++|+||++++ .. + +.++.| +++.+++++++++|++.| |++. +++|.++++++.+++.+.+
T Consensus 177 ~G~~~~p~~s~~~~----~~----~-~~~~~~--~~~~~~v~~~g~eii~~k~~~g~t~-~~~a~a~~~~~~ai~~~~~g 244 (314)
T 1mld_A 177 AGKTIIPLISQCTP----KV----D-FPQDQL--STLTGRIQEAGTEVVKAKAGAGSAT-LSMAYAGARFVFSLVDAMNG 244 (314)
T ss_dssp SGGGEEECGGGCBS----CC----C-CCHHHH--HHHHHHHHHHHHHHHHHHTTSCSCC-HHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcEeeecccCCC----cc----c-CCHHHH--HHHHHHHHHHHHHHHhhhcCCCCcc-hhHHHHHHHHHHHHHcCcCC
Confidence 7999999999985 21 1 223333 689999999999999965 5444 6778899999887665421
Q ss_pred CceEEEeeeecCCCCCCCCceEEEEeEEe-cCCcEEEeCCC-CCCHHHHHHHHHHHHHHHHHHHHHhhhhC
Q 021646 241 KGTWVSMGVYSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGL-KVDEFSRAKMDATAEELAEEKTLAYSCLN 309 (309)
Q Consensus 241 ~~~v~~~sv~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~-~L~~~E~~~l~~s~~~i~~~i~~~~~~~~ 309 (309)
++.++++ ++++|+| ++++|||+||++ ++|++++++ + +|+++|+++|++|++.|+++++.+.+|++
T Consensus 245 ~~~v~~~-~~~~g~y--~~~~~~~~P~~ig~~Gv~~i~~-l~~l~~~e~~~l~~s~~~l~~~~~~~~~~~~ 311 (314)
T 1mld_A 245 KEGVVEC-SFVKSQE--TDCPYFSTPLLLGKKGIEKNLG-IGKISPFEEKMIAEAIPELKASIKKGEEFVK 311 (314)
T ss_dssp CTTCEEE-EEEECCS--SSSSEEEEEEEEETTEEEEECC-CCSCCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcceEEE-EEeCCcc--CCceEEEEEEEEeCCeeEEecC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3478898 7999999 589999999986 999999987 8 99999999999999999999999998864
No 34
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=100.00 E-value=3.9e-50 Score=374.15 Aligned_cols=276 Identities=19% Similarity=0.277 Sum_probs=243.6
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASAL 94 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i 94 (309)
+++|+|++ ++++++.++|+.|.... .....+...+++++++||+||++.+.+++|+++|.|++.+|+++++++++.|
T Consensus 27 ~V~l~D~~--~~~~~~~~~~l~~~~~~-~~~~~i~~~d~~~~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i 103 (319)
T 1a5z_A 27 EMVLIDVD--KKRAEGDALDLIHGTPF-TRRANIYAGDYADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNV 103 (319)
T ss_dssp EEEEECSS--HHHHHHHHHHHHHHGGG-SCCCEEEECCGGGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeCC--hHHHHHHHHHHHhhhhh-cCCcEEEeCCHHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 78999997 57889999999987632 2222222224788999999999999999999999999999999999999999
Q ss_pred hhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceeeec
Q 021646 95 EKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDV 173 (309)
Q Consensus 95 ~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp~~ 173 (309)
.+++ |+++++++|||+|+++++++++ ++||++| ||++|.||++|+++++|++++++|++|++++ |||||++++|+|
T Consensus 104 ~~~~-~~~~ii~~tNp~~~~~~~~~~~-~~~~~~rviG~~t~ld~~r~~~~la~~lgv~~~~v~~~v-~G~hg~~~~p~~ 180 (319)
T 1a5z_A 104 SKYA-PDSIVIVVTNPVDVLTYFFLKE-SGMDPRKVFGSGTVLDTARLRTLIAQHCGFSPRSVHVYV-IGEHGDSEVPVW 180 (319)
T ss_dssp HHHC-TTCEEEECSSSHHHHHHHHHHH-HTCCTTTEEECTTHHHHHHHHHHHHHHHTCCGGGEECCE-EBCSSTTCEECG
T ss_pred HhhC-CCeEEEEeCCcHHHHHHHHHHH-hCCChhhEEeeCccHHHHHHHHHHHHHhCcCHHHceEEE-EeCCCCCcccch
Confidence 9998 7999999999999999999999 5899988 5889999999999999999999999999885 999999999999
Q ss_pred CCceeecCCCCcchhhhhcccc-cc---hhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCCCCceEEEeee
Q 021646 174 NHATVTTSKGEKPVREAVADDN-WL---NTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGV 249 (309)
Q Consensus 174 S~~~v~~~~~~~pl~~~~~~~~-~~---~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~~sv 249 (309)
|++++ +|+|+.+++.... |. .+++.+.++++++++++.||.+++ ++|.++++++.+ |+++ +++++|+|+
T Consensus 181 s~~~v----~G~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~kg~~~~-~~a~a~~~~~~a-i~~~-~~~~~~~~~ 253 (319)
T 1a5z_A 181 SGAMI----GGIPLQNMCQVCQKCDSKILENFAEKTKRAAYEIIERKGATHY-AIALAVADIVES-IFFD-EKRVLTLSV 253 (319)
T ss_dssp GGCEE----TTEEHHHHHTTSSSCCHHHHHHHHHHHHHHHHHHHHHHSCCCH-HHHHHHHHHHHH-HHTT-CCEEEEEEE
T ss_pred hhceE----CCEEHHHHhhcccccCHHHHHHHHHHHHHhhhhhhccCCchHH-HHHHHHHHHHHH-HHhC-CCCEEEEEE
Confidence 99999 9999999865322 32 357889999999999999998775 457889998875 5555 899999999
Q ss_pred ecCCCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 021646 250 YSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAY 305 (309)
Q Consensus 250 ~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~ 305 (309)
+++|+||+ +|+|+|+||++ ++|++++++ ++|+++|+++|++|++.|++.++.+.
T Consensus 254 ~~~g~~g~-~~~~~~vP~~vg~~Gv~~i~~-~~L~~~e~~~l~~s~~~l~~~~~~~~ 308 (319)
T 1a5z_A 254 YLEDYLGV-KDLCISVPVTLGKHGVERILE-LNLNEEELEAFRKSASILKNAINEIT 308 (319)
T ss_dssp EESSBTTB-CSEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCccCc-cceEEEEEEEEeCCceEEEec-CCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999 89999999986 999999998 89999999999999999999998763
No 35
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=100.00 E-value=4.1e-49 Score=368.25 Aligned_cols=298 Identities=52% Similarity=0.837 Sum_probs=259.3
Q ss_pred ccccCCCCeEEEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhH
Q 021646 5 GIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNV 84 (309)
Q Consensus 5 g~~~~~~~~~~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~ 84 (309)
...++.+++.+++|+|+++..+++.|.++||+|...+....+....+.+++++++|+||.+||.+++++++|.+++..|+
T Consensus 27 ~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv 106 (327)
T 1y7t_A 27 GEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNG 106 (327)
T ss_dssp TTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHH
T ss_pred CCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHH
Confidence 33455667789999999643356789999999975443345555566788999999999999999989999999999999
Q ss_pred HHHHHHHHHHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEee
Q 021646 85 SIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGN 164 (309)
Q Consensus 85 ~i~~~i~~~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~Ge 164 (309)
.+++++++.+++++.|+++++++|||+|.++++.++.+.++||+++.++|.||+.|+++++++++++++..++.+.|||+
T Consensus 107 ~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~ 186 (327)
T 1y7t_A 107 KIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGN 186 (327)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBC
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcC
Confidence 99999999999996258999999999999999999983378999998889999999999999999999999997667999
Q ss_pred cCCceeeecCCceeecCCCCcchhhhhcccccchhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCCCCceE
Q 021646 165 HSSTQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTW 244 (309)
Q Consensus 165 hG~s~vp~~S~~~v~~~~~~~pl~~~~~~~~~~~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v 244 (309)
||++++|.||++.+ +|.|+.+++. ++|..+++.++++++|++|++.||+++++++|.++++++.+++.+.+++++
T Consensus 187 h~~~~~~~~~~~~~----~g~~l~~~~~-~~~~~~~~~~~v~~~g~~ii~~kg~~~~~~~a~a~~~~~~~i~~~~~~~~~ 261 (327)
T 1y7t_A 187 HSSTMFPDLFHAEV----DGRPALELVD-MEWYEKVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDW 261 (327)
T ss_dssp SSTTCEEECSSCEE----TTEEGGGTSC-HHHHHHTHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHTBCCTTCC
T ss_pred CCCeEEEEeeeeee----CCeeHHHhcc-chhHHHHHHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHcCCCCCeE
Confidence 99999999999999 9999988763 345457899999999999999999988888888899998866654225889
Q ss_pred EEeeeecCCCCCCCCceEEEEeEEecCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHhhh
Q 021646 245 VSMGVYSDGSYGIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAYSC 307 (309)
Q Consensus 245 ~~~sv~~~g~ygi~~~v~~s~Pv~~~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~~~ 307 (309)
+|+|++++|+||+|+|+|||+||++++|+++++++++|+++|+++|++|++.|+++++.+.++
T Consensus 262 ~~~~~~~~g~yg~~~~~~~~~P~~i~~G~~~i~~~~~l~~~e~~~l~~s~~~l~~~~~~~~~~ 324 (327)
T 1y7t_A 262 VSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDEMEQVKAL 324 (327)
T ss_dssp EEEEEECSSGGGCCTTSEEEEEEEEETTEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEecCccCCCCCeEEEEEEEEcCCeEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999987799999998768999999999999999999999987653
No 36
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=100.00 E-value=2.9e-48 Score=362.53 Aligned_cols=269 Identities=21% Similarity=0.294 Sum_probs=227.1
Q ss_pred EEEEEEecCCccchhhHHHHHHhhccCCCCcceee---cCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHH
Q 021646 14 VILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVA---TTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQ 90 (309)
Q Consensus 14 ~~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~---~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i 90 (309)
.+|+|+|+++ + .|.++||.|...+. .+.. .++..+++++||+||+++|.+++++++|.+++..|+++++++
T Consensus 35 ~ev~l~Di~~--~--~~~~~dL~~~~~~~--~v~~~~~t~d~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i 108 (326)
T 1smk_A 35 SVLHLYDVVN--A--PGVTADISHMDTGA--VVRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTL 108 (326)
T ss_dssp EEEEEEESSS--H--HHHHHHHHTSCSSC--EEEEEESHHHHHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHH
T ss_pred CEEEEEeCCC--c--HhHHHHhhcccccc--eEEEEeCCCCHHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHH
Confidence 6799999973 3 88999999976431 2332 223457899999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCcEEEEecCchhH----HHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeec-
Q 021646 91 ASALEKHAAPNCKVLVVANPANT----NALILKEFAPSIPAKNITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNH- 165 (309)
Q Consensus 91 ~~~i~~~~~p~~~vivvsnPvd~----~t~~~~~~~~~~~~~~ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~Geh- 165 (309)
++.+.+++ |+++++++|||+|+ +|+.+++. ++||++|+.+.|.||++|++++||+++|++|++|++++ ||||
T Consensus 109 ~~~i~~~~-p~~~viv~SNPv~~~~~~~t~~~~~~-~~~p~~rviG~~~Ld~~r~~~~la~~l~v~~~~v~~~v-~G~H~ 185 (326)
T 1smk_A 109 CEGIAKCC-PRAIVNLISNPVNSTVPIAAEVFKKA-GTYDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVDVPV-VGGHA 185 (326)
T ss_dssp HHHHHHHC-TTSEEEECCSSHHHHHHHHHHHHHHH-TCCCTTSEEECCHHHHHHHHHHHHHHHTCCGGGCBCCE-EECSS
T ss_pred HHHHHhhC-CCeEEEEECCchHHHHHHHHHHHHHc-cCCCcccEEEEeehHHHHHHHHHHHHhCcChhheEEEE-ecccC
Confidence 99999999 79999999999999 66667888 79999995334999999999999999999999999874 9999
Q ss_pred CCceeeecCCceeecCCCCcchhhhhcccccchhHHHHHHHhhHHHHHhcC---CcChHHHHHHHHHHHHHH---HHhCC
Q 021646 166 SSTQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKAR---KLSSALSAASSACDHIRD---WVLGT 239 (309)
Q Consensus 166 G~s~vp~~S~~~v~~~~~~~pl~~~~~~~~~~~~el~~~v~~~~~~i~~~k---g~t~~~~~a~a~~~~i~~---~i~~~ 239 (309)
|++++|+||++++ ... +.++.| +++.+++++++++|++.| |++ ++++|.++++++.+ |+ ++
T Consensus 186 G~~~~p~~s~~~v----~~~-----~~~~~~--~~~~~~v~~~g~eii~~k~~~gs~-~~~~a~a~~~~~~ai~~~~-~~ 252 (326)
T 1smk_A 186 GVTILPLLSQVKP----PSS-----FTQEEI--SYLTDRIQNGGTEVVEAKAGAGSA-TLSMAYAAVKFADACLRGL-RG 252 (326)
T ss_dssp GGGEEECGGGCBS----CCC-----CCHHHH--HHHHHHHHHHHHHHHHHTTTSCCC-CHHHHHHHHHHHHHHHHHH-HT
T ss_pred CceEEEecccCee----cCc-----CCHHHH--HHHHHHHHHHHHHHHhcccCCCCc-HHHHHHHHHHHHHHHHHHh-CC
Confidence 8999999999999 321 223333 689999999999999977 544 45778888887543 34 44
Q ss_pred CCceEEEeeeecCCCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 021646 240 PKGTWVSMGVYSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAYSCL 308 (309)
Q Consensus 240 ~~~~v~~~sv~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~~~~ 308 (309)
+++++|++ +.+|+| |.++|||+||++ ++|+++++++++|+++|+++|++|++.|+++++.+.+|.
T Consensus 253 -~~~v~~~~-~~~g~~--~~~~~~~vP~~ig~~Gv~~i~~~~~L~~~e~~~l~~s~~~l~~~~~~~~~~~ 318 (326)
T 1smk_A 253 -DAGVIECA-FVSSQV--TELPFFASKVRLGRNGIEEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSFI 318 (326)
T ss_dssp -CSCEEEEE-EEECCS--SSSSEEEEEEEEETTEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCeEEEEE-eecccc--CCceEEEEEEEEeCCeeEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999998 788875 578999999986 999999987579999999999999999999999998874
No 37
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=100.00 E-value=3.3e-47 Score=352.79 Aligned_cols=275 Identities=15% Similarity=0.187 Sum_probs=235.6
Q ss_pred EEEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCC----CCCCHHHHHHHhHHHHHH
Q 021646 14 VILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRK----EGMERKDVMSKNVSIYKA 89 (309)
Q Consensus 14 ~~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~----~~~sr~~~~~~N~~i~~~ 89 (309)
.+++|+|++ ++++++.++|+.|........+.+...+++++++||+||++.+.+++ ||++|.+++..|++++++
T Consensus 27 ~~V~l~d~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~ 104 (309)
T 1hyh_A 27 DDYVFIDAN--EAKVKADQIDFQDAMANLEAHGNIVINDWAALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQS 104 (309)
T ss_dssp SEEEEECSS--HHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHH
T ss_pred CEEEEEcCC--HHHHHHHHHHHHhhhhhcCCCeEEEeCCHHHhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHH
Confidence 378999997 57899999999887643333444422345889999999999999988 999999999999999999
Q ss_pred HHHHHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCc
Q 021646 90 QASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSST 168 (309)
Q Consensus 90 i~~~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s 168 (309)
+++.+.+++ |+++++++|||+|++++++++. +++|++| ||+||.||++|+++++|+++++++++|++++ ||+||++
T Consensus 105 i~~~i~~~~-~~~~ii~~tNp~~~~~~~~~~~-~~~~~~rvig~gt~ld~~r~~~~~a~~l~~~~~~v~~~v-~G~hg~~ 181 (309)
T 1hyh_A 105 VGTNLKESG-FHGVLVVISNPVDVITALFQHV-TGFPAHKVIGTGTLLDTARMQRAVGEAFDLDPRSVSGYN-LGEHGNS 181 (309)
T ss_dssp HHHHHHHTT-CCSEEEECSSSHHHHHHHHHHH-HCCCGGGEEECTTHHHHHHHHHHHHHHHTCCGGGCBCCE-EBCTTTT
T ss_pred HHHHHHHHC-CCcEEEEEcCcHHHHHHHHHHh-cCCCHHHEeecCccchHHHHHHHHHHHhCCChhheEEEE-EeCCCCc
Confidence 999999998 6999999999999999999999 7999988 5777999999999999999999999999885 8999999
Q ss_pred eeeecCCceeecCCCCcchhhh--hcccccchhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCCCCceEEE
Q 021646 169 QYPDVNHATVTTSKGEKPVREA--VADDNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVS 246 (309)
Q Consensus 169 ~vp~~S~~~v~~~~~~~pl~~~--~~~~~~~~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~ 246 (309)
++|+||++++ +|.|+.++ +.++.| +++.++++++++++++.||.+.+ ++|.++++++.++ .++ +++++|
T Consensus 182 ~~~~~s~~~v----~g~~~~~~~~~~~~~~--~~~~~~v~~~g~~ii~~kg~~~~-~~a~a~~~~~~ai-~~~-~~~~~~ 252 (309)
T 1hyh_A 182 QFVAWSTVRV----MGQPIVTLADAGDIDL--AAIEEEARKGGFTVLNGKGYTSY-GVATSAIRIAKAV-MAD-AHAELV 252 (309)
T ss_dssp CEECTTTCEE----TTEEGGGC-----CCH--HHHHHHHHHHHHHHHHHHSSCCH-HHHHHHHHHHHHH-HTT-CCEEEE
T ss_pred EeeccccceE----CCEEHHHhccCCHHHH--HHHHHHHHHhHHHHHhccCCchH-HHHHHHHHHHHHH-HcC-CCcEEE
Confidence 9999999999 99999887 344555 68999999999999999997764 6778899988754 554 789999
Q ss_pred eeeecCCCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 021646 247 MGVYSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAYSCL 308 (309)
Q Consensus 247 ~sv~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~~~~ 308 (309)
+|++++| .++|+|+|+++ ++|++++++ ++|+++|+++|++|++.|++.++.+.+.|
T Consensus 253 ~~~~~~g-----~~~~~~vP~~i~~~Gv~~i~~-~~l~~~e~~~l~~s~~~l~~~~~~~~~~~ 309 (309)
T 1hyh_A 253 VSNRRDD-----MGMYLSYPAIIGRDGVLAETT-LDLTTDEQEKLLQSRDYIQQRFDEIVDTL 309 (309)
T ss_dssp EEEECTT-----TCSEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEEECC-----CCeEEEEEEEEeCCceEEEeC-CCCCHHHHHHHHHHHHHHHHHHHHHhhhC
Confidence 9999998 47899999986 999999998 89999999999999999999999887653
No 38
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=100.00 E-value=2.5e-46 Score=348.17 Aligned_cols=276 Identities=17% Similarity=0.291 Sum_probs=239.6
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCC--CcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPL--LKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAS 92 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~--~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~ 92 (309)
+++|+|++ ++++++.++|+.|...+. ..++...++ ++++++||+||+++|.|++||++|.|++.+|+++++++++
T Consensus 30 ~V~l~D~~--~~~~~~~~~~l~~~~~~~~~~~~i~~t~d-~~a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~ 106 (317)
T 2ewd_A 30 DVVLFDIA--EGIPQGKALDITHSMVMFGSTSKVIGTDD-YADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAE 106 (317)
T ss_dssp EEEEECSS--SSHHHHHHHHHHHHHHHHTCCCCEEEESC-GGGGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHH
T ss_pred eEEEEeCC--chHHHHHHHHHHhhhhhcCCCcEEEECCC-HHHhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHH
Confidence 58999997 568888899999875321 234554444 5889999999999999999999999999999999999999
Q ss_pred HHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceee
Q 021646 93 ALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYP 171 (309)
Q Consensus 93 ~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp 171 (309)
.|.+++ |+++++++|||++++++.+++. +++|++| ||.+|.+|++|+++++|+++|+++.++++++ +|+||++++|
T Consensus 107 ~i~~~~-~~~iii~~sNp~~~~~~~~~~~-~~~~~~rviG~~t~ld~~r~~~~la~~lg~~~~~v~~~v-~g~Hg~~~~~ 183 (317)
T 2ewd_A 107 GVKKYC-PNAFVICITNPLDVMVSHFQKV-SGLPHNKVCGMAGVLDSSRFRTFIAQHFGVNASDVSANV-IGGHGDGMVP 183 (317)
T ss_dssp HHHHHC-TTSEEEECCSSHHHHHHHHHHH-HCCCGGGEEESCHHHHHHHHHHHHHHHHTSCGGGEECCE-EBCSSTTCEE
T ss_pred HHHHHC-CCcEEEEeCChHHHHHHHHHHh-hCCCHHHEEeccCcHHHHHHHHHHHHHhCcChhhceEEE-EecCCCceeE
Confidence 999998 6999999999999999999998 6898888 5888999999999999999999999999995 8999999999
Q ss_pred ecCCceeecCCCCcchhhhhcccccc---hhHHHHHHHhhHHHHHh--cCCcChHHHHHHHHHHHHHHHHhCCCCceEEE
Q 021646 172 DVNHATVTTSKGEKPVREAVADDNWL---NTEFITTVQQRGAAIIK--ARKLSSALSAASSACDHIRDWVLGTPKGTWVS 246 (309)
Q Consensus 172 ~~S~~~v~~~~~~~pl~~~~~~~~~~---~~el~~~v~~~~~~i~~--~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~ 246 (309)
+||.+++ +|+|+.+++.+.-+. .+++.+.++.+++++++ .+|.+. +++|.++++++.+ |+++ +++++|
T Consensus 184 ~~~~a~v----~g~~~~~~~~~g~~~~~~id~~~~~~~~~~~ei~~~~g~g~~~-~~~a~a~~~~~~a-i~~~-~~~~~~ 256 (317)
T 2ewd_A 184 ATSSVSV----GGVPLSSFIKQGLITQEQIDEIVCHTRIAWKEVADNLKTGTAY-FAPAAAAVKMAEA-YLKD-KKAVVP 256 (317)
T ss_dssp CGGGCEE----TTEEHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHSSSCCC-HHHHHHHHHHHHH-HHTT-CCEEEE
T ss_pred Eeecccc----CCEEHHHHHhccCCCHHHHHHHHHHHHhhHHHHHHhhcCCchH-HHHHHHHHHHHHH-HHcC-CCeEEE
Confidence 9999999 999998876432111 24577777889999999 465454 5678889998875 4555 789999
Q ss_pred eeeecCCCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 021646 247 MGVYSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAY 305 (309)
Q Consensus 247 ~sv~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~ 305 (309)
++++.+|+||+ +++|+|+||++ ++|++++++ ++|+++|+++|++|++.|++.+++..
T Consensus 257 ~~~~~~G~~g~-~~~~~~~P~~i~~~Gv~~i~~-~~l~~~e~~~l~~s~~~l~~~~~~~~ 314 (317)
T 2ewd_A 257 CSAFCSNHYGV-KGIYMGVPTIIGKNGVEDILE-LDLTPLEQKLLGESINEVNTISKVLD 314 (317)
T ss_dssp EEEEESSSTTC-SSEEEEEEEEEETTEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCccCC-cceEEEeEEEEcCCeeEEecC-CCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999 89999999986 999999998 89999999999999999999998764
No 39
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=100.00 E-value=1.4e-39 Score=302.02 Aligned_cols=275 Identities=21% Similarity=0.292 Sum_probs=236.4
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeec-CChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVAT-TDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASA 93 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~-~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~ 93 (309)
+++|+|++ +++++|.++|+.|..... ....+. +.+++++++||+||++.+.++++|++|.+++..|+++++++++.
T Consensus 34 ~V~l~d~~--~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~ 110 (319)
T 1lld_A 34 EIVLEDIA--KERVEAEVLDMQHGSSFY-PTVSIDGSDDPEICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPN 110 (319)
T ss_dssp EEEEECSS--HHHHHHHHHHHHHTGGGS-TTCEEEEESCGGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCC--hhHHHHHHHHHHhhhhhc-CCeEEEeCCCHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 78999997 567888899998876321 122222 22467899999999999999999999999999999999999999
Q ss_pred HhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceeee
Q 021646 94 LEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPD 172 (309)
Q Consensus 94 i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp~ 172 (309)
+.+++ |++++++++||++.++++++++ +++|+++ ||++|.+|+.|++..+++++++++.++++++ ||+||++++|+
T Consensus 111 i~~~~-~~~~vi~~~Np~~~~~~~~~~~-~~~~~~~vig~~~~l~~~r~~~~~a~~~~v~~~~v~~~~-~G~~g~~~~~~ 187 (319)
T 1lld_A 111 LVKVA-PNAIYMLITNPVDIATHVAQKL-TGLPENQIFGSGTNLDSARLRFLIAQQTGVNVKNVHAYI-AGEHGDSEVPL 187 (319)
T ss_dssp HHHHC-TTSEEEECCSSHHHHHHHHHHH-HTCCTTSEEECTTHHHHHHHHHHHHHHHTCCGGGEECCE-EBSSSTTCEEC
T ss_pred HHHhC-CCceEEEecCchHHHHHHHHHh-cCCCHHHEeeccccHhHHHHHHHHHHHhCCCHHHeEEEE-EeCCCCceeee
Confidence 99997 7999999999999999999998 6899988 5778999999999999999999999999885 89999999999
Q ss_pred cCCceeecCCCCcchhhhhcccccc------hhHHHHHHHhhHHHHHhcCCcChHHHHHHHHHHHHHHHHhCCCCceEEE
Q 021646 173 VNHATVTTSKGEKPVREAVADDNWL------NTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVS 246 (309)
Q Consensus 173 ~S~~~v~~~~~~~pl~~~~~~~~~~------~~el~~~v~~~~~~i~~~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~ 246 (309)
||++.+ ++.|+..+.....|. ..++.+.+++.+++|++.+|.+.+ +++.+..+++++++ .+ ++.+++
T Consensus 188 w~k~~i----n~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~v~~~~G~~~~-~~a~~~~sm~~di~-~~-~~~ei~ 260 (319)
T 1lld_A 188 WESATI----GGVPMSDWTPLPGHDPLDADKREEIHQEVKNAAYKIINGKGATNY-AIGMSGVDIIEAVL-HD-TNRILP 260 (319)
T ss_dssp TTSCEE----TTEEGGGCCCCTTCCCCCHHHHHHHHHHHHHHHHHHHTSCCSCCH-HHHHHHHHHHHHHH-TT-CCEEEE
T ss_pred eecceE----CCccHHHHHhccccccCCHHHHHHHHHHHHHhhHhhhhCCCCchH-HHHHHHHHHHHHHH-cC-CCcEEE
Confidence 999999 888998775432221 246788899999999999997764 45667788887654 44 789999
Q ss_pred eeeecCCCCCCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 021646 247 MGVYSDGSYGIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLA 304 (309)
Q Consensus 247 ~sv~~~g~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~ 304 (309)
+|++.+|+|+. .+.++|+|+.+ ++|++++++ ++|+++|+++|++|++.|++.++..
T Consensus 261 ~s~~~~G~~~~-~~~~~gvp~~~~~~Gv~~i~~-~~l~~~e~~~l~~s~~~l~~~~~~~ 317 (319)
T 1lld_A 261 VSSMLKDFHGI-SDICMSVPTLLNRQGVNNTIN-TPVSDKELAALKRSAETLKETAAQF 317 (319)
T ss_dssp EEEECSSBTTB-CSSEEEEEEEEETTEEECCSC-CCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEecCcCCc-cceEEEEEEEEeCCeeEEEcC-CCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999988 89999999976 999999998 9999999999999999999998753
No 40
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=100.00 E-value=1.7e-39 Score=311.62 Aligned_cols=275 Identities=13% Similarity=0.102 Sum_probs=219.6
Q ss_pred EEEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHH--------------
Q 021646 14 VILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDV-------------- 79 (309)
Q Consensus 14 ~~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~-------------- 79 (309)
.+|+|+|++ ++++++ ++|+.+.......+++.+++.+++++|||+||+|+|.+++|+++|+++
T Consensus 32 ~el~L~Di~--~~~~~~-~~~~~~~~~~~~~~v~~t~d~~~al~~AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G 108 (417)
T 1up7_A 32 DEVIFYDID--EEKQKI-VVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTG 108 (417)
T ss_dssp CEEEEECSC--HHHHHH-HHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSST
T ss_pred CEEEEEeCC--HHHHHH-HHHHHHHHhhCCeEEEEeCCHHHHhCCCCEEEEcCCCCCCCccchhhhhhhhcCcccccccc
Confidence 479999997 678887 889988542222344444444689999999999999999999998643
Q ss_pred ------HHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHhCCC
Q 021646 80 ------MSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERLKVH 152 (309)
Q Consensus 80 ------~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l~v~ 152 (309)
+.+|+++++++++.|+++| +|++|++|||+|+||++++++ + |++| ||++|.++ |+++++|+.++++
T Consensus 109 ~GGi~~~~rni~i~~~i~~~i~~~~--~A~lin~TNPvdi~t~a~~k~-~--p~~rviG~c~~~~--r~~~~la~~lgv~ 181 (417)
T 1up7_A 109 VGGFSAALRAFPIVEEYVDTVRKTS--NATIVNFTNPSGHITEFVRNY-L--EYEKFIGLCNVPI--NFIREIAEMFSAR 181 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT--CCEEEECSSSHHHHHHHHHHT-T--CCSSEEECCSHHH--HHHHHHHHHTTCC
T ss_pred cchhHHhhccHHHHHHHHHHHHHHC--CEEEEEeCChHHHHHHHHHHh-C--CCCCEEEeCCCHH--HHHHHHHHHhCCC
Confidence 4789999999999999998 999999999999999999998 3 7756 79999885 9999999999999
Q ss_pred CCCeeeeEEEe-----------ecCCceeeecCCc---eeecCCCCcchh-hhhc----------------ccc---c--
Q 021646 153 VSDVKNVIIWG-----------NHSSTQYPDVNHA---TVTTSKGEKPVR-EAVA----------------DDN---W-- 196 (309)
Q Consensus 153 ~~~v~~~vV~G-----------ehG~s~vp~~S~~---~v~~~~~~~pl~-~~~~----------------~~~---~-- 196 (309)
|++|++++ +| +||++++|.||.. ++.+. .+.|+. ++++ ++. +
T Consensus 182 ~~~v~~~v-~GlNH~~w~~~~~~hG~d~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~p~~y~~~y~~~~~~~~~~~~ 259 (417)
T 1up7_A 182 LEDVFLKY-YGLNHLSFIEKVFVKGEDVTEKVFENLKLKLSNI-PDEDFPTWFYDSVRLIVNPYLRYYLMEKKMFKKIST 259 (417)
T ss_dssp GGGEEEEE-EEETTEEEEEEEEETTEECHHHHHHHHTTC---C-CTTSCCHHHHHHHCSEECGGGHHHHTHHHHHHHHHT
T ss_pred HHHCeEEE-EeecceeeEEEeecCCcEehhhHHHHHHHhhCCC-cCCchHHHHHHhcCCCccchhhhccCCHHHHHhccc
Confidence 99999885 89 9999999999996 56110 236772 3321 010 0
Q ss_pred --chhHHHHHHHhhHHHHH----------hcCCcChHHHHHHHHHHHHHHHHhCCCCceEEEeeeecCCCC-CCCCceEE
Q 021646 197 --LNTEFITTVQQRGAAII----------KARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSY-GIPEGLIY 263 (309)
Q Consensus 197 --~~~el~~~v~~~~~~i~----------~~kg~t~~~~~a~a~~~~i~~~i~~~~~~~v~~~sv~~~g~y-gi~~~v~~ 263 (309)
.+.+..+++++++++++ +.||++. . +.++++++. ++++| +++++|+|++.+|+| |+|.|+++
T Consensus 260 ~~~r~~~~~~~~~~~~~i~~~~~~~~~~l~~kg~t~-~--~~~a~~ii~-AI~~d-~~~~~~vsv~n~G~i~~lp~d~~v 334 (417)
T 1up7_A 260 HELRAREVMKIEKELFEKYRTAVEIPEELTKRGGSM-Y--STAAAHLIR-DLETD-EGKIHIVNTRNNGSIENLPDDYVL 334 (417)
T ss_dssp SCCHHHHHHHHHHHHHHHHTTCSSCCGGGGGSTTTT-H--HHHHHHHHH-HHHSS-SCEEEEEEEECTTSSTTSCTTCEE
T ss_pred cchHHHHHHHHHHHHHHHHHhhcccchhhhhcCCcH-H--HHHHHHHHH-HHHcC-CCeEEEEEEecCCccCCCCCCeEE
Confidence 01223566778889998 4566553 2 345677765 67776 899999999999999 79999999
Q ss_pred EEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 021646 264 SFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAYS 306 (309)
Q Consensus 264 s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~~ 306 (309)
++|+++ ++|++.+.. .+|+++|+++++.++...+..++++.+
T Consensus 335 evP~~vg~~Gi~~i~~-~~L~~~e~~~l~~~~~~e~l~veA~~~ 377 (417)
T 1up7_A 335 EIPCYVRSGRVHTLSQ-GKGDHFALSFIHAVKMYERLTIEAYLK 377 (417)
T ss_dssp EEEEEEETTEEEEBCC-CCCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeEEEeCCceEEeec-CCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999986 999999997 899999999999999999998887653
No 41
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=100.00 E-value=2.2e-38 Score=306.62 Aligned_cols=280 Identities=12% Similarity=0.053 Sum_probs=214.1
Q ss_pred EEEEEEecCCccchhhHHHHHHhhccC---CCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHH-----------
Q 021646 14 VILHMLDIEPAAEALNGVKMELIDAAF---PLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDV----------- 79 (309)
Q Consensus 14 ~~l~L~D~~~~~~~~~g~~~DL~~~~~---~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~----------- 79 (309)
.+|+|+|+++..+++++ +.|+.+... ....++..+++.+++++|||+||+++|.+++|+++|+++
T Consensus 37 ~ev~L~Di~~~~e~~~~-~~~~~~~~~~~~~~~~~i~~t~D~~eal~gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~e 115 (450)
T 1s6y_A 37 GELWLVDIPEGKEKLEI-VGALAKRMVEKAGVPIEIHLTLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQE 115 (450)
T ss_dssp EEEEEECCGGGHHHHHH-HHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCS
T ss_pred CEEEEEEcCCChHHHHH-HHHHHHHHHhhcCCCcEEEEeCCHHHHhCCCCEEEEcCCCCCCcchhhhhhhhhhcCccccc
Confidence 47999999721178887 346655331 123345555555689999999999999999999999865
Q ss_pred ---------HHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHh
Q 021646 80 ---------MSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERL 149 (309)
Q Consensus 80 ---------~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l 149 (309)
+.+|+++++++++.|+++| |+|++|++|||+|+||++++++ + |++| ||+++.++ ||++++|+.+
T Consensus 116 t~G~ggi~~~~rni~i~~~i~~~i~~~~-P~a~ii~~tNPvdivT~a~~k~-~--p~~rViG~c~~~~--r~~~~la~~l 189 (450)
T 1s6y_A 116 TNGPGGLFKGLRTIPVILDIIRDMEELC-PDAWLINFTNPAGMVTEAVLRY-T--KQEKVVGLCNVPI--GMRMGVAKLL 189 (450)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHHHHHHHHHH-C--CCCCEEECCSHHH--HHHHHHHHHH
T ss_pred ccccchHHHHhhhHHHHHHHHHHHHHHC-CCeEEEEeCCcHHHHHHHHHHh-C--CCCCEEEeCCcHH--HHHHHHHHHh
Confidence 7899999999999999999 7999999999999999999999 3 7756 78888874 9999999999
Q ss_pred CCCCCCeeeeEEEe-----------ecCCceeeecCCceee----c---C-CCCcchh-hhh-----------c-----c
Q 021646 150 KVHVSDVKNVIIWG-----------NHSSTQYPDVNHATVT----T---S-KGEKPVR-EAV-----------A-----D 193 (309)
Q Consensus 150 ~v~~~~v~~~vV~G-----------ehG~s~vp~~S~~~v~----~---~-~~~~pl~-~~~-----------~-----~ 193 (309)
|++|++|++++ +| +||++++|.||...+. . . -.+.|+. +++ . +
T Consensus 190 gv~~~~v~~~v-~GlNH~~w~~~v~~~G~d~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~p~~y~~yy~~~~ 268 (450)
T 1s6y_A 190 GVDADRVHIDF-AGLNHMVFGLHVYLDGVEVTEKVIDLVAHPDRSGVTMKNIVDLGWEPDFLKGLKVLPCPYHRYYFQTD 268 (450)
T ss_dssp TSCGGGEEEEE-EEETTEEEEEEEEETTEECHHHHHHHHSCC------------CCCCHHHHHHHCSBCCGGGHHHHSHH
T ss_pred CCCHHHcEEEE-EeeecceeEEEeeeCCcCchHhHHHHHhhhccccccccccccCccHHHHHHhcCCccchhhhhhcCCH
Confidence 99999999886 89 9999999999986541 0 0 0012442 111 0 1
Q ss_pred cc---c--------chhHHHHHHHhhHHHHH-----hcCC-----cChHHHHHHHHHHHHHHHHhCCCCceEEEeeeecC
Q 021646 194 DN---W--------LNTEFITTVQQRGAAII-----KARK-----LSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSD 252 (309)
Q Consensus 194 ~~---~--------~~~el~~~v~~~~~~i~-----~~kg-----~t~~~~~a~a~~~~i~~~i~~~~~~~v~~~sv~~~ 252 (309)
+. | .+.++.+++++++++++ ..|+ ++.++ .+.++++++. ++++| +++++|+|++.+
T Consensus 269 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~ei~~~~~~~~k~~~~~~~~~~~-~~~~a~~ii~-AI~~d-~~~~~~vsv~n~ 345 (450)
T 1s6y_A 269 KMLAEELEAAKTKGTRAEVVQQLEKELFELYKDPNLAIKPPQLEKRGGAY-YSDAACSLIS-SIYND-KRDIQPVNTRNN 345 (450)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHTTTTCC-----------CCSCC-HHHHHHHHHH-HHHHT-CCCEEEEEEECT
T ss_pred HHHHhhhccccccchHHHHHHHHHHHHHHHHhhhccccccchhhcccchH-HHHHHHHHHH-HHHcC-CCeEEEEEeecC
Confidence 10 0 12356677888899998 4443 33322 2346777765 56676 899999999999
Q ss_pred CCC-CCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 021646 253 GSY-GIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAY 305 (309)
Q Consensus 253 g~y-gi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~ 305 (309)
|+| |+|.|+|+++|+++ ++|++.+.. .+|+++|+++++.++..-+-.++++.
T Consensus 346 G~i~~lp~d~~vevP~vvg~~Gi~~i~~-~~L~~~e~~l~~~~~~~e~l~veAa~ 399 (450)
T 1s6y_A 346 GAIASISAESAVEVNCVITKDGPKPIAV-GDLPVAVRGLVQQIKSFERVAAEAAV 399 (450)
T ss_dssp TSBTTSCTTSEEEEEEEEETTEEEECCC-BCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceecCCCCCeEEEEeEEEcCCCeEEeec-CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999 78899999999986 999999997 89999999999999887766666554
No 42
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=100.00 E-value=6.4e-36 Score=290.66 Aligned_cols=278 Identities=14% Similarity=0.118 Sum_probs=205.8
Q ss_pred EEEEEEecCCccchhhHHHHHHhhccC---CCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHH-----------
Q 021646 14 VILHMLDIEPAAEALNGVKMELIDAAF---PLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDV----------- 79 (309)
Q Consensus 14 ~~l~L~D~~~~~~~~~g~~~DL~~~~~---~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~----------- 79 (309)
.+|+|+|++ ++++++. .|+.+... ....++..+++.+++++|||+||+++|.+++++++|+++
T Consensus 58 ~eV~L~Di~--~e~~~~~-~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g~~~~e 134 (472)
T 1u8x_X 58 RKLKLYDND--KERQDRI-AGACDVFIREKAPDIEFAATTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQE 134 (472)
T ss_dssp EEEEEECSC--HHHHHHH-HHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCS
T ss_pred CEEEEEeCC--HHHHHHH-HHHHHHHhccCCCCCEEEEECCHHHHHcCCCEEEEcCCCccccccchhhhhhhhcCccccc
Confidence 579999997 6788884 68776431 123455555555689999999999999999999999666
Q ss_pred ---------HHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHh
Q 021646 80 ---------MSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERL 149 (309)
Q Consensus 80 ---------~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l 149 (309)
+.+|+++++++++.|+++| |+|++|++|||+|++|+++++. + |++| ||+++.++ ||++++|+.+
T Consensus 135 T~G~ggl~~~~rni~i~~~i~~~i~~~~-P~A~ii~~TNPvdi~T~~~~k~-~--p~~rViG~c~~~~--r~~~~la~~l 208 (472)
T 1u8x_X 135 TCGPGGIAYGMRSIGGVLEILDYMEKYS-PDAWMLNYSNPAAIVAEATRRL-R--PNSKILNICDMPV--GIEDRMAQIL 208 (472)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSCHHHHHHHHHHH-S--TTCCEEECCSHHH--HHHHHHHHHH
T ss_pred ccCchhHHHHhhhHHHHHHHHHHHHHHC-CCeEEEEeCCcHHHHHHHHHHh-C--CCCCEEEeCCcHH--HHHHHHHHHh
Confidence 7899999999999999999 7999999999999999999999 3 7766 78888875 9999999999
Q ss_pred CCCC-CCeeeeEEEe-----------e-cCCceeeecCCceee-c--C-C----CCcchh-hhhc------------ccc
Q 021646 150 KVHV-SDVKNVIIWG-----------N-HSSTQYPDVNHATVT-T--S-K----GEKPVR-EAVA------------DDN 195 (309)
Q Consensus 150 ~v~~-~~v~~~vV~G-----------e-hG~s~vp~~S~~~v~-~--~-~----~~~pl~-~~~~------------~~~ 195 (309)
|++| ++|++++ +| + ||++++|.||...+. . . + ...|+. +++. +.+
T Consensus 209 gv~~~~~v~~~v-~GlNH~~W~~~~~~~hG~d~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 287 (472)
T 1u8x_X 209 GLSSRKEMKVRY-YGLNHFGWWTSIQDQEGNDLMPKLKEHVSQYGYIPKTEAEAVEASWNDTFAKARDVQAADPDTLPNT 287 (472)
T ss_dssp TCSCGGGEEEEE-EEETTEEEEEEEEETTCCBCHHHHHHHHHHHSSCCCC-------CTTSHHHHHHHHHHTSTTSEECG
T ss_pred CcCchhceeEEE-eccchhhheeeeEeCCCCEehHhHHHHHHhcCCCccccccccccchHHHHHhhcCccccccccCCcc
Confidence 9998 9999885 89 9 999999999986541 0 0 0 011221 1211 011
Q ss_pred ---c-c-hhHHHH----------HHHh----hHHHHHh-c--CC------cChHHHHHHHHHHHHHHHHhCCCCceEEEe
Q 021646 196 ---W-L-NTEFIT----------TVQQ----RGAAIIK-A--RK------LSSALSAASSACDHIRDWVLGTPKGTWVSM 247 (309)
Q Consensus 196 ---~-~-~~el~~----------~v~~----~~~~i~~-~--kg------~t~~~~~a~a~~~~i~~~i~~~~~~~v~~~ 247 (309)
| . .+++.+ .+++ ..+++++ . +| ++.+. .+.++++++. ++++| +++++|+
T Consensus 288 Yl~yy~~~~~~~e~~~~~~~r~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~a~~ii~-AI~~d-~~~v~~v 364 (472)
T 1u8x_X 288 YLQYYLFPDDMVKKSNPNHTRANEVMEGREAFIFSQCDMITREQSSENSEIKIDD-HASYIVDLAR-AIAYN-TGERMLL 364 (472)
T ss_dssp GGHHHHSHHHHHTTSCSSSCHHHHHHHHTTTTTTTTHHHHHHHTSCCSCSSCCCT-TTHHHHHHHH-HHHHT-CCEEEEE
T ss_pred chhcccCCHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcCCcccccccccH-HHHHHHHHHH-HHhcC-CCeEEEE
Confidence 1 0 012111 1222 2222222 3 44 22223 3456778765 56666 8999999
Q ss_pred eeecCCCC-CCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 021646 248 GVYSDGSY-GIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAY 305 (309)
Q Consensus 248 sv~~~g~y-gi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~ 305 (309)
|++.+|+| |+|.|+|+++|+++ ++|++.+.. .+|+++|+++++.-...-+-.++++.
T Consensus 365 sv~n~G~i~glp~d~~veVP~vvg~~Gi~pi~~-~~Lp~~~~~l~~~~~~~e~l~veAa~ 423 (472)
T 1u8x_X 365 IVENNGAIANFDPTAMVEVPCIVGSNGPEPITV-GTIPQFQKGLMEQQVSVEKLTVEAWA 423 (472)
T ss_dssp EEECTTSBTTSCTTSEEEEEEEEETTEEEECCC-BCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeecCceecCcCCCeEEEEeEEEcCCCceEeec-CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 79999999999986 999999987 89999999999887766555555443
No 43
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=99.94 E-value=3.6e-25 Score=213.55 Aligned_cols=267 Identities=15% Similarity=0.195 Sum_probs=188.8
Q ss_pred EEEEEecCCccchhhH--HHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCC------------CCCCCCCCHH--H
Q 021646 15 ILHMLDIEPAAEALNG--VKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGG------------FPRKEGMERK--D 78 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g--~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag------------~~~~~~~sr~--~ 78 (309)
+++|+|++ +++++- ...+. ... ...+++.+++..++++|||+||++.. +|+|+|+.|. |
T Consensus 35 eV~L~Di~--~e~le~~~~~~~~--l~~-~~~~I~~TtD~~eAl~dADfVI~airvG~~~~~~~De~ip~k~G~~~~vge 109 (450)
T 3fef_A 35 TVALYDLD--FEAAQKNEVIGNH--SGN-GRWRYEAVSTLKKALSAADIVIISILPGSLDDMEVDVHLPERCGIYQSVGD 109 (450)
T ss_dssp EEEEECSS--HHHHHHHHHHHTT--STT-SCEEEEEESSHHHHHTTCSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCS
T ss_pred eEEEEeCC--HHHHHHHHHHHHH--Hhc-cCCeEEEECCHHHHhcCCCEEEeccccCCcccchhhhhhhhccCccccchh
Confidence 89999997 444432 22221 111 23456677777889999999999985 6889998877 6
Q ss_pred HHH--------HhHHHHHHHHHHHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHHHHHHHh
Q 021646 79 VMS--------KNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMGQISERL 149 (309)
Q Consensus 79 ~~~--------~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~~la~~l 149 (309)
... +|+++++++++.|+++| |+|++|++|||+|++|+++++. +|+.| ||.++.+ .+++..+|+.|
T Consensus 110 t~g~GGi~~alr~~~i~~~i~~~i~~~~-p~a~~i~~tNPvdi~t~~~~k~---~p~~rviG~C~~~--~~~~~~~a~~l 183 (450)
T 3fef_A 110 TVGPGGIIRGLRAVPIFAEIARAIRDYA-PESWVINYTNPMSVCTRVLYKV---FPGIKAIGCCHEV--FGTQKLLAEMV 183 (450)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSHHHHHHHHHHH---CTTCEEEECCSHH--HHHHHHHHHHH
T ss_pred hcCCchhhcccccHHHHHHHHHHHHHHC-CCeEEEEecCchHHHHHHHHHH---CCCCCEEEeCCcH--HHHHHHHHHHH
Confidence 555 89999999999999999 7999999999999999999997 47777 5766665 89999999999
Q ss_pred ----C---CCCCCeeeeEEEe-ecCCceeeecCCceeecCCCCcchhhhhcc-------c-------ccch---------
Q 021646 150 ----K---VHVSDVKNVIIWG-NHSSTQYPDVNHATVTTSKGEKPVREAVAD-------D-------NWLN--------- 198 (309)
Q Consensus 150 ----~---v~~~~v~~~vV~G-ehG~s~vp~~S~~~v~~~~~~~pl~~~~~~-------~-------~~~~--------- 198 (309)
| +++++|+..+ .| +| +..|+++++ +|.++...+.+ + .|..
T Consensus 184 ~~~lg~~~~~~~~v~~~~-~GlNH----~~w~~~~~~----~G~d~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (450)
T 3fef_A 184 TERLGIEVPRREDIRVNV-LGINH----FTWITKASY----RHIDLLPIFREFSAHYGESGYELEGECWRDSVFCSAHRV 254 (450)
T ss_dssp HHHHCCCCSCGGGEEEEE-EEETT----EEEEEEEEE----TTEEHHHHHHHHHHHHTTTCCCCTTCCTTSCTTCCCSHH
T ss_pred HhhcCCCCCChhHeEEEE-eeecC----eEeEEEEEE----CCEEChHHHHHHHHhhcccccccccccccccccchhhHH
Confidence 5 7899999775 79 98 889999988 77776642210 0 1100
Q ss_pred -hHHHHHH----------------------------------------Hh---hHHHHHhc-CCcChHHHHHHHHHHHHH
Q 021646 199 -TEFITTV----------------------------------------QQ---RGAAIIKA-RKLSSALSAASSACDHIR 233 (309)
Q Consensus 199 -~el~~~v----------------------------------------~~---~~~~i~~~-kg~t~~~~~a~a~~~~i~ 233 (309)
-++.+.. .+ .-.+..+. +......+ +.++++++.
T Consensus 255 ~~~~~~~~g~~p~~~~~h~~ey~p~~Y~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~~ii~ 333 (450)
T 3fef_A 255 AFDLFETYGAIPAAGDRHLAEFLPGPYLKQPEVWKFHLTPISFRKQDRAEKRQETERLIVQQRGVAEKAS-GEEGVNIIA 333 (450)
T ss_dssp HHHHHHHHSSEECSCHHHHTTSSCSSGGGCTTTTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCC-SCCHHHHHH
T ss_pred HHHHHHHcCCcccccccchhcccchhhcCCHHHhcccccchhhHHHHHHHHHHHHHHHhcCCcCcCcCcc-HHHHHHHHH
Confidence 0111110 00 00000000 00000000 112456554
Q ss_pred HHHhCCCCceEEEeeeecCCCC-CCCCceEEEEeEEe-cCCcEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 021646 234 DWVLGTPKGTWVSMGVYSDGSY-GIPEGLIYSFPVTC-EKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAY 305 (309)
Q Consensus 234 ~~i~~~~~~~v~~~sv~~~g~y-gi~~~v~~s~Pv~~-~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~i~~~~ 305 (309)
+|.++ +++++++|++.+|.| |+|.|+++++|+++ ++|++.+.. .+|++.++.+++.-...-+-.++++.
T Consensus 334 -aI~~d-~~~~~~vnv~n~G~i~~lp~d~~vevP~~v~~~Gi~pi~~-g~Lp~~~~~l~~~~~~~e~l~veAa~ 404 (450)
T 3fef_A 334 -ALLGL-GELVTNVNMPNQGQVLNLPIQAIVETNAFITRNRVQPILS-GALPKGVEMLAARHISNQEAVADAGL 404 (450)
T ss_dssp -HHTTS-CCEEEEEEEECSSSSTTSCTTSEEEEEEEEETTEEEEBCC-CCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHcC-CCeEEEEEeecCcEecCCCCCeEEEEEEEEcCCCceeccc-CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 57776 899999999999998 89899999999986 999999876 78999999988776665555555443
No 44
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=99.88 E-value=1.3e-21 Score=190.06 Aligned_cols=275 Identities=13% Similarity=0.127 Sum_probs=178.7
Q ss_pred EEEEEEecCCccchhhHHHHHHhhcc---CCCCcceeecCChhhhcCCCcEEEEeCCC------------CCCCCCCH--
Q 021646 14 VILHMLDIEPAAEALNGVKMELIDAA---FPLLKGVVATTDVVEACKDVNIAVMVGGF------------PRKEGMER-- 76 (309)
Q Consensus 14 ~~l~L~D~~~~~~~~~g~~~DL~~~~---~~~~~~~~~~~~~~~~l~~aDiVVitag~------------~~~~~~sr-- 76 (309)
.+++|+|++ ++++++ +.|+.+.. .....+++.+++.+++++|||+||+++|. +.|+|..|
T Consensus 33 ~eV~L~Di~--~e~l~~-~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l 109 (480)
T 1obb_A 33 STVTLMDID--EERLDA-ILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGI 109 (480)
T ss_dssp CEEEEECSC--HHHHHH-HHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCT
T ss_pred CEEEEEeCC--HHHHHH-HHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEEEECCCcccccccccccccccccccccch
Confidence 479999997 578887 44443322 12234566665656899999999999986 44556555
Q ss_pred HH------------HHHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCc-EEEechhHHHHHHH
Q 021646 77 KD------------VMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKN-ITCLTRLDHNRAMG 143 (309)
Q Consensus 77 ~~------------~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~-ig~gt~lds~R~~~ 143 (309)
.+ ++.+|+++++++++.|+++| |+|++|++|||+|++|++++++ |++| ||++|.+|+ +++
T Consensus 110 ~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~-P~A~ii~~TNPvdi~t~~~~k~----p~~rviG~c~~~~~--~~~ 182 (480)
T 1obb_A 110 DAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLS-PKAWYLQAANPIFEGTTLVTRT----VPIKAVGFCHGHYG--VME 182 (480)
T ss_dssp TCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHC-TTCEEEECSSCHHHHHHHHHHH----SCSEEEEECSGGGH--HHH
T ss_pred hhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHC-CCeEEEEeCCcHHHHHHHHHHC----CCCcEEecCCCHHH--HHH
Confidence 44 36789999999999999999 7999999999999999999984 6767 799999996 689
Q ss_pred HHHHHhCCCCCCeeeeEEEe-ecCC----------ceee-----------------ecCC--ceee-----cCCCCcch-
Q 021646 144 QISERLKVHVSDVKNVIIWG-NHSS----------TQYP-----------------DVNH--ATVT-----TSKGEKPV- 187 (309)
Q Consensus 144 ~la~~l~v~~~~v~~~vV~G-ehG~----------s~vp-----------------~~S~--~~v~-----~~~~~~pl- 187 (309)
++ +.+|++|++|++++ +| +|.. ...| .|+. ..+. .+ |-.|.
T Consensus 183 ~l-~~lgv~~~~v~~~v-~GlNH~~w~~~~~~~G~D~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~p~~ 259 (480)
T 1obb_A 183 IV-EKLGLEEEKVDWQV-AGVNHGIWLNRFRYNGGNAYPLLDKWIEEKSKDWKPENPFNDQLSPAAIDMYRFY-GVMPIG 259 (480)
T ss_dssp HH-HHTTCCGGGEEEEE-EEETTEEEEEEEEETTEECHHHHHHHHHHTGGGCCCSSTTCCTTSHHHHHHHHHH-SSCEEG
T ss_pred HH-HHhCCCHHHceEEE-EeecchhhhhheeeCCeEcHHHHHHHHHccCccccccccccchhhhHHHHHHHhc-CCeecC
Confidence 99 99999999999885 68 4432 1001 1221 1110 00 11222
Q ss_pred -----hhhh------c-------cc----cc---c-----hhHHHHHHHhhHHHHHhcCC-----------cChHH----
Q 021646 188 -----REAV------A-------DD----NW---L-----NTEFITTVQQRGAAIIKARK-----------LSSAL---- 222 (309)
Q Consensus 188 -----~~~~------~-------~~----~~---~-----~~el~~~v~~~~~~i~~~kg-----------~t~~~---- 222 (309)
.+++ . +. .| . ..+..+...+.-+++.+... +++|.
T Consensus 260 ~~~h~~~y~~~~~~~~~~yyy~~~~~~~~~~~~~~~~~~~~~e~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (480)
T 1obb_A 260 DTVRNSSWRYHRDLETKKKWYGEPWGGADSEIGWKWYQDTLGKVTEITKKVAKFIKENPSVRLSDLGSVLGKDLSEKQFV 339 (480)
T ss_dssp GGTTSCCGGGGSSHHHHHHHHCTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCSSSSCCSHHHHHHH
T ss_pred CCCCCcCcccccccCccccccchhhcccccccccHhHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccc
Confidence 0222 1 00 00 0 01111222222333433321 12221
Q ss_pred -H----------HHHHHHHHHHHHHhCCCCceEEEeeeecCC-CCCCCCceEEEEeEEe-cCCcEEEeCCCC-CCHHHHH
Q 021646 223 -S----------AASSACDHIRDWVLGTPKGTWVSMGVYSDG-SYGIPEGLIYSFPVTC-EKGEWSIVKGLK-VDEFSRA 288 (309)
Q Consensus 223 -~----------~a~a~~~~i~~~i~~~~~~~v~~~sv~~~g-~ygi~~~v~~s~Pv~~-~~Gv~~i~~~~~-L~~~E~~ 288 (309)
. .+-.++.+|. ++.++ .+.++.++|.-+| -.++|.|.++-+||++ ++|+..+.- -+ |.+....
T Consensus 340 ~~~~~~~~~~~~~ge~a~~ii~-ai~~~-~~~~~~vnv~N~G~I~~lp~d~vVEvp~~v~~~G~~p~~~-g~~lP~~~~~ 416 (480)
T 1obb_A 340 LEVEKILDPERKSGEQHIPFID-ALLND-NKARFVVNIPNKGIIHGIDDDVVVEVPALVDKNGIHPEKI-EPPLPDRVVK 416 (480)
T ss_dssp HHHHHHHCTTCCCSCSHHHHHH-HHHHC-CCEEEEEEEECTTSSTTSCTTSEEEEEEEEETTEEEECCC-SSCCCHHHHH
T ss_pred cccccccccchhhhHHHHHHHH-HHHhC-CCeEEEEEeeCCceeCCCCCCeEEEEEEEEcCCCCEeecc-CCCCCHHHHh
Confidence 0 0012455554 45665 8899999999888 4688999999999987 999998765 47 9998888
Q ss_pred H-HHHHHHHHHHHHHHH
Q 021646 289 K-MDATAEELAEEKTLA 304 (309)
Q Consensus 289 ~-l~~s~~~i~~~i~~~ 304 (309)
. ++.-...-+-.++++
T Consensus 417 l~~~~~~~~e~l~veA~ 433 (480)
T 1obb_A 417 YYLRPRIMRMEMALEAF 433 (480)
T ss_dssp HTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 8 666555544444443
No 45
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=99.81 E-value=6.4e-19 Score=171.63 Aligned_cols=153 Identities=17% Similarity=0.138 Sum_probs=120.1
Q ss_pred eEEEEEEecCCccchhhHHHHHHhhccCCC--CcceeecCChhhhcCCCcEEEEeCCC-------------------CCC
Q 021646 13 PVILHMLDIEPAAEALNGVKMELIDAAFPL--LKGVVATTDVVEACKDVNIAVMVGGF-------------------PRK 71 (309)
Q Consensus 13 ~~~l~L~D~~~~~~~~~g~~~DL~~~~~~~--~~~~~~~~~~~~~l~~aDiVVitag~-------------------~~~ 71 (309)
..+|+|+|++ ++++++.++|++++.... ..+++.+++..++++|||+||+|+|. |+|
T Consensus 31 ~~ei~L~Di~--~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~eAl~gAD~Vi~~~g~~~~Rvg~~~~r~~de~~~ip~k 108 (477)
T 3u95_A 31 DTHIYLMDVH--ERRLNASYILARKYVEELNSPVKVVKTESLDEAIEGADFIINTAYPYDPRYHDSGSQRWDEVTKVGEK 108 (477)
T ss_dssp TCEEEEECSC--HHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHHHTTCSEEEECCCCCCTTTCSSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCC--HHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHHHhCCCCEEEECcccccccccccccccceeeeccCcc
Confidence 3589999997 689999999999987433 33566667778899999999999975 336
Q ss_pred CCCCHHHHHH---------------HhHHHHHHHHHHHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCcEEEechh
Q 021646 72 EGMERKDVMS---------------KNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRL 136 (309)
Q Consensus 72 ~~~sr~~~~~---------------~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~ig~gt~l 136 (309)
+|++|..+.+ .|++++.++++.|+++| |+|.+|+.|||+++||+.++++ ++. +.||. |
T Consensus 109 ~G~~~~~l~qet~g~gG~~~~lR~~~~i~v~~~i~~~i~~~~-P~A~~in~tNP~~i~t~a~~~~-~~~--k~vGl-C-- 181 (477)
T 3u95_A 109 HGYYRGIDSQELNMVSTYTYVLSSYPDVKLALEIAEKMKKMA-PKAYLMQTANPVFEITQAVRRW-TGA--NIIGF-C-- 181 (477)
T ss_dssp TTCTTCTTCBTTBCCTTSCSTTTTHHHHHHHHHHHHHHHHHC-TTCEEEECSSCHHHHHHHHHHH-HCC--CEEEE-C--
T ss_pred cceeecccccccCCccchhHHHhhhhhHHHHHHHHHHHHhhC-CCeEEEEecChHHHHHHHHHHh-CCC--CeEEE-C--
Confidence 7777766543 48999999999999999 7999999999999999999998 554 33544 3
Q ss_pred HHHHHHHHHHHHhCCCCCCeeeeEEEeecCCceeeecCC
Q 021646 137 DHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNH 175 (309)
Q Consensus 137 ds~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp~~S~ 175 (309)
|+.+....+++.||+++++|+..+ .|-+.-+-+..|+.
T Consensus 182 ~~~~~~~~~~~~Lg~~~~~v~~~~-~GlNH~~w~~~~~~ 219 (477)
T 3u95_A 182 HGVAGVYEVFERLGLDPEEVDWQV-AGVNHGIWLNRFRY 219 (477)
T ss_dssp CGGGHHHHHHHHTTCCGGGEEEEE-EEETTEEEEEEEEE
T ss_pred CCHHHHHHHHHHhCCCHHHcEEEE-eecCCCeeeeeeee
Confidence 344445567788999999999664 79766666665543
No 46
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=90.91 E-value=0.68 Score=44.60 Aligned_cols=87 Identities=11% Similarity=0.044 Sum_probs=52.8
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCC----------------CcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPL----------------LKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKD 78 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~----------------~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~ 78 (309)
+++++|++ +++.++.+..|.....+. ..++..+++ ++++++||+||++.+.+..++.++
T Consensus 45 ~V~~~D~~--~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd-~ea~~~aDvViiaVptp~~~~~~~-- 119 (478)
T 3g79_A 45 KVLGFQRN--SKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD-FSRISELDAVTLAIQTPFANPKDL-- 119 (478)
T ss_dssp EEEEECCC--CTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC-GGGGGGCSEEEECCCCCCCSSCCS--
T ss_pred eEEEEECC--hhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc-HHHHhcCCEEEEecCCchhccCCc--
Confidence 67899997 344455666666543222 234555555 788999999999998876544321
Q ss_pred HHHHhHHHHHHHHHHHhhhcCCCcEEEEec
Q 021646 79 VMSKNVSIYKAQASALEKHAAPNCKVLVVA 108 (309)
Q Consensus 79 ~~~~N~~i~~~i~~~i~~~~~p~~~vivvs 108 (309)
..+...++..+..|.++..|+.+|+.-|
T Consensus 120 --~~dl~~v~~~~~~i~~~l~~g~iVV~~S 147 (478)
T 3g79_A 120 --EPDFSALIDGIRNVGKYLKPGMLVVLES 147 (478)
T ss_dssp --SCCCHHHHHHHHHHHHHCCTTCEEEECS
T ss_pred --cccHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence 1234445555566666654555555444
No 47
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=85.35 E-value=2.5 Score=40.18 Aligned_cols=58 Identities=16% Similarity=0.193 Sum_probs=38.6
Q ss_pred ceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEec
Q 021646 45 GVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA 108 (309)
Q Consensus 45 ~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvs 108 (309)
++..+++..+++++||+||++.+.+..++. ..+...+++.+..|.++..|+.+|+..|
T Consensus 65 ~l~~t~d~~ea~~~aDvViiaVptp~~~~~------~~dl~~v~~v~~~i~~~l~~g~iVV~~S 122 (450)
T 3gg2_A 65 RLRFGTEIEQAVPEADIIFIAVGTPAGEDG------SADMSYVLDAARSIGRAMSRYILIVTKS 122 (450)
T ss_dssp SEEEESCHHHHGGGCSEEEECCCCCBCTTS------SBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred cEEEECCHHHHHhcCCEEEEEcCCCcccCC------CcChHHHHHHHHHHHhhCCCCCEEEEee
Confidence 355566666679999999999987754432 2345566666777777764565555555
No 48
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=84.03 E-value=2.9 Score=40.00 Aligned_cols=67 Identities=13% Similarity=0.172 Sum_probs=40.6
Q ss_pred eeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEe-cCchhH
Q 021646 46 VVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVV-ANPANT 113 (309)
Q Consensus 46 ~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivv-snPvd~ 113 (309)
+...++..+++++||+||++.+.|.+.+.++.+ -..+...+.+.+..|.++..|+.+|+.. |+|+..
T Consensus 74 l~~t~~~~~~~~~aDvvii~Vptp~~~~g~~~~-~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt 141 (481)
T 2o3j_A 74 LFFSSDIPKAIAEADLIFISVNTPTKMYGRGKG-MAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKA 141 (481)
T ss_dssp EEEESCHHHHHHHCSEEEECCCCCBCCSSTTTT-TSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTH
T ss_pred EEEECCHHHHhhcCCEEEEecCCcccccccccc-CCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCH
Confidence 455555557789999999998877654333222 1223445566667777776445544432 677654
No 49
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=80.93 E-value=3.2 Score=38.70 Aligned_cols=70 Identities=11% Similarity=0.144 Sum_probs=40.6
Q ss_pred eeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEE-ecCchhHHHHHHHHH
Q 021646 46 VVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLV-VANPANTNALILKEF 121 (309)
Q Consensus 46 ~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~viv-vsnPvd~~t~~~~~~ 121 (309)
+...++..+++++||+||++...+..++..+.| ...+.+.+..+.+.. |+.+|+. .|||+...-.+...+
T Consensus 61 l~~t~~~~~~~~~aDvviiavpt~~~~~~~~~d-----l~~v~~v~~~i~~l~-~~~iVV~~ST~~~g~~~~l~~~~ 131 (402)
T 1dlj_A 61 IKATLDSKAAYKEAELVIIATPTNYNSRINYFD-----TQHVETVIKEVLSVN-SHATLIIKSTIPIGFITEMRQKF 131 (402)
T ss_dssp EEEESCHHHHHHHCSEEEECCCCCEETTTTEEC-----CHHHHHHHHHHHHHC-SSCEEEECSCCCTTHHHHHHHHT
T ss_pred EEEeCCHHHHhcCCCEEEEecCCCcccCCCCcc-----HHHHHHHHHHHHhhC-CCCEEEEeCCCCccHHHHHHHHh
Confidence 344444457789999999998765322222222 123333344444433 5665555 689998877666554
No 50
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=79.03 E-value=9.4 Score=35.79 Aligned_cols=62 Identities=18% Similarity=0.209 Sum_probs=34.8
Q ss_pred eeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCC---CcEEEEe-cCchhH
Q 021646 46 VVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAP---NCKVLVV-ANPANT 113 (309)
Q Consensus 46 ~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p---~~~vivv-snPvd~ 113 (309)
+...++..+++++||+||++...+..++.. .+...+++.+..|.++..| +.+|+.. |+|+..
T Consensus 64 l~~t~~~~~~~~~aDvviiaVptp~~~~~~------~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~ 129 (436)
T 1mv8_A 64 LSGTTDFKKAVLDSDVSFICVGTPSKKNGD------LDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGT 129 (436)
T ss_dssp EEEESCHHHHHHTCSEEEECCCCCBCTTSS------BCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTH
T ss_pred eEEeCCHHHHhccCCEEEEEcCCCcccCCC------cchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCc
Confidence 455555556789999999998776533211 1223333444444444334 5555544 677654
No 51
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=74.24 E-value=4.4 Score=35.58 Aligned_cols=52 Identities=12% Similarity=0.138 Sum_probs=32.5
Q ss_pred eeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCch
Q 021646 46 VVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPA 111 (309)
Q Consensus 46 ~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPv 111 (309)
+...++..+++++||+||.+... +....+.+...+.+++.|+++++..|...
T Consensus 73 i~~~~~~~~~~~~aDlVi~av~~--------------~~~~~~~v~~~l~~~~~~~~il~s~tS~~ 124 (283)
T 4e12_A 73 IRYSDDLAQAVKDADLVIEAVPE--------------SLDLKRDIYTKLGELAPAKTIFATNSSTL 124 (283)
T ss_dssp CEEESCHHHHTTTCSEEEECCCS--------------CHHHHHHHHHHHHHHSCTTCEEEECCSSS
T ss_pred eEEeCCHHHHhccCCEEEEeccC--------------cHHHHHHHHHHHHhhCCCCcEEEECCCCC
Confidence 44555556678999999998632 23344455556777776777655444433
No 52
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=70.52 E-value=6.2 Score=37.74 Aligned_cols=57 Identities=14% Similarity=0.128 Sum_probs=36.9
Q ss_pred eeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEec
Q 021646 46 VVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA 108 (309)
Q Consensus 46 ~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvs 108 (309)
+..+++..+++++||+||++...|.+++.+ .+...+++.+..|.++..|+.+|+.-|
T Consensus 72 l~~ttd~~~a~~~aDvviiaVptp~~~~~~------~dl~~v~~v~~~i~~~l~~~~iVV~~S 128 (478)
T 2y0c_A 72 LRFSTDIEAAVAHGDVQFIAVGTPPDEDGS------ADLQYVLAAARNIGRYMTGFKVIVDKS 128 (478)
T ss_dssp EEEECCHHHHHHHCSEEEECCCCCBCTTSS------BCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred EEEECCHHHHhhcCCEEEEEeCCCcccCCC------ccHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 455555556789999999998876543322 344556666667777765566555544
No 53
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=69.36 E-value=17 Score=34.43 Aligned_cols=59 Identities=20% Similarity=0.287 Sum_probs=36.8
Q ss_pred ceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEec
Q 021646 45 GVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA 108 (309)
Q Consensus 45 ~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvs 108 (309)
+++.+++..+++++||+||++-+.|..++.. ..+...+++.+..|.++-.|+.+|+.-|
T Consensus 71 ~l~~ttd~~ea~~~aDvvii~Vptp~~~~~~-----~~Dl~~v~~v~~~i~~~l~~g~iVV~~S 129 (446)
T 4a7p_A 71 RLSFTTDLAEGVKDADAVFIAVGTPSRRGDG-----HADLSYVFAAAREIAENLTKPSVIVTKS 129 (446)
T ss_dssp CEEEESCHHHHHTTCSEEEECCCCCBCTTTC-----CBCTHHHHHHHHHHHHSCCSCCEEEECS
T ss_pred CEEEECCHHHHHhcCCEEEEEcCCCCccccC-----CccHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 3556666667899999999998877543111 1234445555566766654566665555
No 54
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=64.83 E-value=19 Score=32.81 Aligned_cols=61 Identities=7% Similarity=-0.015 Sum_probs=41.7
Q ss_pred ceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhH----HHHHHHH
Q 021646 45 GVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANT----NALILKE 120 (309)
Q Consensus 45 ~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~----~t~~~~~ 120 (309)
++...++..+++++||+||++.-. ..++++...+..+..|+.+++.++|-++. +..++.+
T Consensus 86 ~i~~t~d~~ea~~~aDvVilaVp~----------------~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~ 149 (356)
T 3k96_A 86 TLKAYCDLKASLEGVTDILIVVPS----------------FAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVAT 149 (356)
T ss_dssp TEEEESCHHHHHTTCCEEEECCCH----------------HHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHH
T ss_pred CeEEECCHHHHHhcCCEEEECCCH----------------HHHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHH
Confidence 455666667789999999998521 24666777888876668888888875543 3345555
Q ss_pred H
Q 021646 121 F 121 (309)
Q Consensus 121 ~ 121 (309)
.
T Consensus 150 ~ 150 (356)
T 3k96_A 150 E 150 (356)
T ss_dssp H
T ss_pred H
Confidence 4
No 55
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=63.76 E-value=35 Score=32.19 Aligned_cols=41 Identities=12% Similarity=0.120 Sum_probs=27.4
Q ss_pred hhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEE
Q 021646 52 VVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLV 106 (309)
Q Consensus 52 ~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~viv 106 (309)
+++++++||+||++.. .+..+.+++...+..++.|+++++.
T Consensus 108 ~~~~~~~aDlVIeaVp--------------e~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 108 STKELSTVDLVVEAVF--------------EDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp CGGGGTTCSEEEECCC--------------SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CHHHHCCCCEEEEcCC--------------CCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 4578999999999873 1344445555667777766775543
No 56
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=61.08 E-value=13 Score=34.99 Aligned_cols=71 Identities=17% Similarity=0.178 Sum_probs=38.1
Q ss_pred ceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEec-CchhHHHHHHHHH
Q 021646 45 GVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA-NPANTNALILKEF 121 (309)
Q Consensus 45 ~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvs-nPvd~~t~~~~~~ 121 (309)
++..+++..+++++||+||++...+..+...+ .+...+++.+..|.+.. |+.+|+.-| -|+...-.+...+
T Consensus 96 ~l~~ttd~~ea~~~aDvViiaVPt~~~~~~~~-----~Dl~~V~~v~~~i~~l~-~g~iVV~~STv~pgtt~~l~~~l 167 (432)
T 3pid_A 96 NFRATTDKHDAYRNADYVIIATPTDYDPKTNY-----FNTSTVEAVIRDVTEIN-PNAVMIIKSTIPVGFTRDIKERL 167 (432)
T ss_dssp CEEEESCHHHHHTTCSEEEECCCCEEETTTTE-----EECHHHHHHHHHHHHHC-TTSEEEECSCCCTTHHHHHHHHH
T ss_pred CeEEEcCHHHHHhCCCEEEEeCCCcccccccc-----ccHHHHHHHHHHHHhcC-CCcEEEEeCCCChHHHHHHHHHH
Confidence 45666666788999999999865442221111 12222333333444433 566555544 5776655555444
No 57
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=61.01 E-value=3.8 Score=37.16 Aligned_cols=90 Identities=10% Similarity=0.040 Sum_probs=53.9
Q ss_pred ceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhHHHHHHHHHCCC
Q 021646 45 GVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPS 124 (309)
Q Consensus 45 ~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~ 124 (309)
.++..++..+++++||+||=+. .+|.++=+++-.+|.++++|++ |++||-.-+...-+.+.++.
T Consensus 74 ~i~~~~~l~~a~~~ad~ViEav--------------~E~l~iK~~lf~~l~~~~~~~a--IlaSNTSsl~is~ia~~~~~ 137 (319)
T 3ado_A 74 LISSCTNLAEAVEGVVHIQECV--------------PENLDLKRKIFAQLDSIVDDRV--VLSSSSSCLLPSKLFTGLAH 137 (319)
T ss_dssp TEEEECCHHHHTTTEEEEEECC--------------CSCHHHHHHHHHHHHTTCCSSS--EEEECCSSCCHHHHHTTCTT
T ss_pred hcccccchHhHhccCcEEeecc--------------ccHHHHHHHHHHHHHHHhhhcc--eeehhhhhccchhhhhhccC
Confidence 4556666677899999976331 2467777888889999998776 56777544433333332211
Q ss_pred ---------C-CCCc-----EEE--echhHHHHHHHHHHHHhC
Q 021646 125 ---------I-PAKN-----ITC--LTRLDHNRAMGQISERLK 150 (309)
Q Consensus 125 ---------~-~~~~-----ig~--gt~lds~R~~~~la~~l~ 150 (309)
| |+.. |.. .|.-++...-..+++++|
T Consensus 138 p~r~ig~HffNP~~~m~LVEiv~g~~Ts~~~~~~~~~~~~~~g 180 (319)
T 3ado_A 138 VKQCIVAHPVNPPYYIPLVELVPHPETSPATVDRTHALMRKIG 180 (319)
T ss_dssp GGGEEEEEECSSTTTCCEEEEEECTTCCHHHHHHHHHHHHHTT
T ss_pred CCcEEEecCCCCccccchHHhcCCCCCcHHHHHHHHHHHHHhC
Confidence 1 3321 222 255666655556667776
No 58
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=59.19 E-value=23 Score=33.62 Aligned_cols=49 Identities=14% Similarity=0.156 Sum_probs=32.8
Q ss_pred ceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEec
Q 021646 45 GVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA 108 (309)
Q Consensus 45 ~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvs 108 (309)
+++..++ ++++++||+||.+.- .+..+.+.+...+.++++|+++++..|
T Consensus 118 ~i~~t~d-l~al~~aDlVIeAVp--------------e~~~vk~~v~~~l~~~~~~~aIlasnT 166 (460)
T 3k6j_A 118 NLKITSD-FHKLSNCDLIVESVI--------------EDMKLKKELFANLENICKSTCIFGTNT 166 (460)
T ss_dssp TEEEESC-GGGCTTCSEEEECCC--------------SCHHHHHHHHHHHHTTSCTTCEEEECC
T ss_pred ceEEeCC-HHHHccCCEEEEcCC--------------CCHHHHHHHHHHHHhhCCCCCEEEecC
Confidence 4555554 468999999999863 234555566677888887787655433
No 59
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=56.89 E-value=13 Score=32.60 Aligned_cols=53 Identities=17% Similarity=0.176 Sum_probs=32.4
Q ss_pred ceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCch
Q 021646 45 GVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPA 111 (309)
Q Consensus 45 ~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPv 111 (309)
+++..++..+++++||+||++.- + +..+.+.+...+..+..|+++++..++..
T Consensus 87 ~i~~~~~~~~~~~~aD~Vi~avp----~----------~~~~~~~v~~~l~~~~~~~~iv~s~ts~i 139 (302)
T 1f0y_A 87 TIATSTDAASVVHSTDLVVEAIV----E----------NLKVKNELFKRLDKFAAEHTIFASNTSSL 139 (302)
T ss_dssp TEEEESCHHHHTTSCSEEEECCC----S----------CHHHHHHHHHHHTTTSCTTCEEEECCSSS
T ss_pred ceEEecCHHHhhcCCCEEEEcCc----C----------cHHHHHHHHHHHHhhCCCCeEEEECCCCC
Confidence 35555555558999999999862 1 22333455566777776677555444433
No 60
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=55.36 E-value=19 Score=36.19 Aligned_cols=48 Identities=23% Similarity=0.337 Sum_probs=31.2
Q ss_pred ceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecC
Q 021646 45 GVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVAN 109 (309)
Q Consensus 45 ~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsn 109 (309)
+++..++ ++++++||+||.+.- .+..+.+.+...+.++++|++++ ++|
T Consensus 379 ~i~~~~d-~~~~~~aDlVIeaVp--------------e~~~vk~~v~~~l~~~~~~~~Il--asn 426 (725)
T 2wtb_A 379 LLKGSLD-YESFRDVDMVIEAVI--------------ENISLKQQIFADLEKYCPQHCIL--ASN 426 (725)
T ss_dssp SEEEESS-SGGGTTCSEEEECCC--------------SCHHHHHHHHHHHHHHSCTTCEE--EEC
T ss_pred ceEEeCC-HHHHCCCCEEEEcCc--------------CCHHHHHHHHHHHHhhCCCCcEE--EeC
Confidence 4555544 478999999999862 23444555666677788667644 444
No 61
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=53.63 E-value=24 Score=30.73 Aligned_cols=72 Identities=15% Similarity=0.144 Sum_probs=40.7
Q ss_pred EEEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHH
Q 021646 14 VILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASA 93 (309)
Q Consensus 14 ~~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~ 93 (309)
..+.++|+++ +++. .+... .++....+..+.+++||+||++. +|. .++++...
T Consensus 30 ~~V~v~dr~~--~~~~----~l~~~-----~gi~~~~~~~~~~~~aDvVilav----~p~------------~~~~vl~~ 82 (280)
T 3tri_A 30 NRICVTNRSL--DKLD----FFKEK-----CGVHTTQDNRQGALNADVVVLAV----KPH------------QIKMVCEE 82 (280)
T ss_dssp GGEEEECSSS--HHHH----HHHHT-----TCCEEESCHHHHHSSCSEEEECS----CGG------------GHHHHHHH
T ss_pred CeEEEEeCCH--HHHH----HHHHH-----cCCEEeCChHHHHhcCCeEEEEe----CHH------------HHHHHHHH
Confidence 3678999973 3333 22221 13445556778899999999986 221 12233344
Q ss_pred Hhhh-cCCCcEEEEecCchh
Q 021646 94 LEKH-AAPNCKVLVVANPAN 112 (309)
Q Consensus 94 i~~~-~~p~~~vivvsnPvd 112 (309)
+..+ ..++.+++-+++.+.
T Consensus 83 l~~~~l~~~~iiiS~~agi~ 102 (280)
T 3tri_A 83 LKDILSETKILVISLAVGVT 102 (280)
T ss_dssp HHHHHHTTTCEEEECCTTCC
T ss_pred HHhhccCCCeEEEEecCCCC
Confidence 4443 335656776666554
No 62
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=53.37 E-value=49 Score=31.23 Aligned_cols=73 Identities=14% Similarity=0.084 Sum_probs=44.2
Q ss_pred ceeecCChhhhcCCCcEEEEeCCCCCCCCC-CHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEec-Cch----hHHHHHH
Q 021646 45 GVVATTDVVEACKDVNIAVMVGGFPRKEGM-ERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA-NPA----NTNALIL 118 (309)
Q Consensus 45 ~~~~~~~~~~~l~~aDiVVitag~~~~~~~-sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvs-nPv----d~~t~~~ 118 (309)
+.+.+++..+++++||+++|+.+.|.+++. .....+. ...+.+++.++..+ +..+|++=| =|+ ++...++
T Consensus 84 ~l~~tt~~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v~---~a~~~I~~~l~~~~-~g~lVV~eSTVppGtte~~~~~~l 159 (444)
T 3vtf_A 84 RLSFAESAEEAVAATDATFIAVGTPPAPDGSADLRYVE---AAARAVGRGIRAKG-RWHLVVVKSTVPPGTTEGLVARAV 159 (444)
T ss_dssp CEEECSSHHHHHHTSSEEEECCCCCBCTTSSBCCHHHH---HHHHHHHHHHHHHC-SCCEEEECSCCCTTTTTTHHHHHH
T ss_pred CeeEEcCHHHHHhcCCceEEEecCCCCCCCCCCcHHHH---HHHHHHHHHHhhcC-CCeEEEEeCCCCCchHHHHHHHHH
Confidence 345666677889999999999998865542 2222332 44567777777654 344455434 354 3445555
Q ss_pred HHH
Q 021646 119 KEF 121 (309)
Q Consensus 119 ~~~ 121 (309)
.+.
T Consensus 160 ~~~ 162 (444)
T 3vtf_A 160 AEE 162 (444)
T ss_dssp HTT
T ss_pred HHh
Confidence 544
No 63
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=53.23 E-value=17 Score=30.91 Aligned_cols=71 Identities=17% Similarity=0.263 Sum_probs=38.8
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASAL 94 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i 94 (309)
++.++|++ +++++..+.++ ++....+..+.+++||+||++. ++. . ++++...+
T Consensus 31 ~V~~~~r~--~~~~~~~~~~~---------g~~~~~~~~e~~~~aDvVilav----~~~-~-----------~~~v~~~l 83 (247)
T 3gt0_A 31 QIICSDLN--TANLKNASEKY---------GLTTTTDNNEVAKNADILILSI----KPD-L-----------YASIINEI 83 (247)
T ss_dssp GEEEECSC--HHHHHHHHHHH---------CCEECSCHHHHHHHCSEEEECS----CTT-T-----------HHHHC---
T ss_pred eEEEEeCC--HHHHHHHHHHh---------CCEEeCChHHHHHhCCEEEEEe----CHH-H-----------HHHHHHHH
Confidence 57789996 34443322221 2334455677788999999987 121 1 33444556
Q ss_pred hhhcCCCcEEEEecCchh
Q 021646 95 EKHAAPNCKVLVVANPAN 112 (309)
Q Consensus 95 ~~~~~p~~~vivvsnPvd 112 (309)
..+..|+.+++..++-+.
T Consensus 84 ~~~l~~~~~vvs~~~gi~ 101 (247)
T 3gt0_A 84 KEIIKNDAIIVTIAAGKS 101 (247)
T ss_dssp CCSSCTTCEEEECSCCSC
T ss_pred HhhcCCCCEEEEecCCCC
Confidence 666545665665555544
No 64
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=52.76 E-value=34 Score=32.25 Aligned_cols=68 Identities=15% Similarity=0.138 Sum_probs=38.4
Q ss_pred ceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEe-cCchhH
Q 021646 45 GVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVV-ANPANT 113 (309)
Q Consensus 45 ~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivv-snPvd~ 113 (309)
++...++..+++++||+||++...+........+ -..+...+.+.+..+.++..|+.+|+.. |+|+..
T Consensus 69 ~~~~t~~~~e~~~~aDvViiaVptp~~~~~v~~~-~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~ 137 (467)
T 2q3e_A 69 NLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKG-RAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRA 137 (467)
T ss_dssp TEEEESCHHHHHHHCSEEEECCCCCBCCSSTTTT-TSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTH
T ss_pred CEEEECCHHHHHhcCCEEEEEcCCchhhcccccc-CCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchH
Confidence 3555555566789999999998765432211000 0123445556666676665455555544 567654
No 65
>2i9x_A Putative septation protein spovg; APC86317.1, staphylococcus epidermidis ATCC 12228, ST genomics, PSI-2, protein structure initiative; 1.80A {Staphylococcus epidermidis} SCOP: d.366.1.1
Probab=51.36 E-value=13 Score=26.87 Aligned_cols=35 Identities=17% Similarity=0.370 Sum_probs=28.5
Q ss_pred CceEEEEeEE-ecCCcEEEeCCCCCCHHHHHHHHHHH
Q 021646 259 EGLIYSFPVT-CEKGEWSIVKGLKVDEFSRAKMDATA 294 (309)
Q Consensus 259 ~~v~~s~Pv~-~~~Gv~~i~~~~~L~~~E~~~l~~s~ 294 (309)
+|.|++.|-. .++|..+-+- .|+|.+-+++|++++
T Consensus 44 ~GlFVaMPs~k~~~g~y~Di~-hPit~e~Re~i~~aV 79 (87)
T 2i9x_A 44 SGLFVAMPSKRTPDGEFRDIA-HPINSDMRQEIQDAV 79 (87)
T ss_dssp TEEEEECCEEECTTSCEEECE-EECSHHHHHHHHHHH
T ss_pred CceEEECCCcCCCCCCEEEEE-EECCHHHHHHHHHHH
Confidence 5789999986 5888887554 589999999998765
No 66
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=49.56 E-value=0.51 Score=43.21 Aligned_cols=16 Identities=31% Similarity=0.476 Sum_probs=13.9
Q ss_pred EEecCchhHHHHHHHH
Q 021646 105 LVVANPANTNALILKE 120 (309)
Q Consensus 105 ivvsnPvd~~t~~~~~ 120 (309)
.++|||+|+|||++|+
T Consensus 234 ~~~~~~~~~~~~~~~~ 249 (330)
T 3ldh_A 234 LVVSNPVDVLTYVAWK 249 (330)
T ss_dssp HTTHHHHTTSSSCSCT
T ss_pred eeccCccchhhhhhhH
Confidence 3689999999999886
No 67
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=48.71 E-value=45 Score=31.71 Aligned_cols=49 Identities=14% Similarity=0.261 Sum_probs=31.0
Q ss_pred ceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEec
Q 021646 45 GVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA 108 (309)
Q Consensus 45 ~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvs 108 (309)
+++..++ ++++++||+||.+.- .+..+.+++...+.+++.|+++++..|
T Consensus 72 ~i~~~~~-~~~~~~aDlVIeAVp--------------e~~~vk~~v~~~l~~~~~~~~Ilasnt 120 (483)
T 3mog_A 72 RLIPVTD-IHALAAADLVIEAAS--------------ERLEVKKALFAQLAEVCPPQTLLTTNT 120 (483)
T ss_dssp TEEEECC-GGGGGGCSEEEECCC--------------CCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred ceeEeCC-HHHhcCCCEEEEcCC--------------CcHHHHHHHHHHHHHhhccCcEEEecC
Confidence 3445543 568999999998852 133444556666777776777554433
No 68
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=48.33 E-value=50 Score=27.18 Aligned_cols=56 Identities=13% Similarity=0.108 Sum_probs=42.4
Q ss_pred CChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecC
Q 021646 50 TDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVAN 109 (309)
Q Consensus 50 ~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsn 109 (309)
....+.+.++|+||.++|... .....+.+..|..-...++..+.+.+ ...++.+|.
T Consensus 76 ~~~~~~~~~~D~vi~~ag~~~--~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~iv~~SS 131 (236)
T 3e8x_A 76 EDFSHAFASIDAVVFAAGSGP--HTGADKTILIDLWGAIKTIQEAEKRG--IKRFIMVSS 131 (236)
T ss_dssp SCCGGGGTTCSEEEECCCCCT--TSCHHHHHHTTTHHHHHHHHHHHHHT--CCEEEEECC
T ss_pred HHHHHHHcCCCEEEECCCCCC--CCCccccchhhHHHHHHHHHHHHHcC--CCEEEEEec
Confidence 445678899999999999754 24567788889988889999988875 235666553
No 69
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=48.28 E-value=55 Score=29.03 Aligned_cols=51 Identities=25% Similarity=0.322 Sum_probs=33.1
Q ss_pred ceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCch
Q 021646 45 GVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPA 111 (309)
Q Consensus 45 ~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPv 111 (309)
++...++..+++.+||+||++.- +. .++++...+..+..|+.+++.++|-+
T Consensus 77 ~~~~~~~~~~~~~~aD~Vilav~----~~------------~~~~v~~~i~~~l~~~~ivv~~~~Gi 127 (354)
T 1x0v_A 77 NVVAVPDVVQAAEDADILIFVVP----HQ------------FIGKICDQLKGHLKANATGISLIKGV 127 (354)
T ss_dssp TEEEESSHHHHHTTCSEEEECCC----GG------------GHHHHHHHHTTCSCTTCEEEECCCCB
T ss_pred CeEEEcCHHHHHcCCCEEEEeCC----HH------------HHHHHHHHHHhhCCCCCEEEEECCcc
Confidence 35555555567899999999862 11 23445556766655677888888744
No 70
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=47.93 E-value=24 Score=31.61 Aligned_cols=50 Identities=12% Similarity=0.070 Sum_probs=33.0
Q ss_pred ceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEec
Q 021646 45 GVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA 108 (309)
Q Consensus 45 ~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvs 108 (309)
+++..++..+++++||+||.+.- .+..+.+.+...+..++.|+++++..|
T Consensus 74 ~i~~~~~~~eav~~aDlVieavp--------------e~~~~k~~v~~~l~~~~~~~~Ii~s~t 123 (319)
T 2dpo_A 74 LISSCTNLAEAVEGVVHIQECVP--------------ENLDLKRKIFAQLDSIVDDRVVLSSSS 123 (319)
T ss_dssp TEEEECCHHHHTTTEEEEEECCC--------------SCHHHHHHHHHHHHTTCCSSSEEEECC
T ss_pred ceEEeCCHHHHHhcCCEEEEecc--------------CCHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 35666666778999999998862 133444555566778876777555444
No 71
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=47.32 E-value=45 Score=26.64 Aligned_cols=49 Identities=14% Similarity=0.283 Sum_probs=33.5
Q ss_pred CCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEec-Cch
Q 021646 57 KDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA-NPA 111 (309)
Q Consensus 57 ~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvs-nPv 111 (309)
.+.|+|||..|..-. ..+. +.+.+| ++.++..+++.+ |++.+++++ .|+
T Consensus 73 ~~pd~Vvi~~G~ND~-~~~~-~~~~~~---l~~ii~~l~~~~-p~~~ii~~~~~P~ 122 (200)
T 4h08_A 73 TKFDVIHFNNGLHGF-DYTE-EEYDKS---FPKLIKIIRKYA-PKAKLIWANTTPV 122 (200)
T ss_dssp SCCSEEEECCCSSCT-TSCH-HHHHHH---HHHHHHHHHHHC-TTCEEEEECCCCC
T ss_pred CCCCeEEEEeeeCCC-CCCH-HHHHHH---HHHHHHHHhhhC-CCccEEEeccCCC
Confidence 578999999987532 2233 334444 567788888887 788887776 344
No 72
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=44.61 E-value=31 Score=29.20 Aligned_cols=51 Identities=8% Similarity=0.011 Sum_probs=32.7
Q ss_pred eeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhH
Q 021646 46 VVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANT 113 (309)
Q Consensus 46 ~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~ 113 (309)
+....+..+.+++||+||++.. +. . ++++...+..+. ++..++..+|.++.
T Consensus 46 ~~~~~~~~~~~~~~D~vi~~v~----~~-~-----------~~~v~~~l~~~l-~~~~vv~~~~gi~~ 96 (262)
T 2rcy_A 46 LNYMSSNEELARHCDIIVCAVK----PD-I-----------AGSVLNNIKPYL-SSKLLISICGGLNI 96 (262)
T ss_dssp SEECSCHHHHHHHCSEEEECSC----TT-T-----------HHHHHHHSGGGC-TTCEEEECCSSCCH
T ss_pred eEEeCCHHHHHhcCCEEEEEeC----HH-H-----------HHHHHHHHHHhc-CCCEEEEECCCCCH
Confidence 3344455667889999999863 11 1 233444566665 57778888887765
No 73
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=43.20 E-value=87 Score=26.42 Aligned_cols=46 Identities=11% Similarity=0.064 Sum_probs=28.1
Q ss_pred ecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecC
Q 021646 48 ATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVAN 109 (309)
Q Consensus 48 ~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsn 109 (309)
...+..+.++++|+||++.... . ++++...+..+..|+.+++..++
T Consensus 58 ~~~~~~~~~~~~Dvvi~av~~~--------~--------~~~v~~~l~~~~~~~~ivv~~s~ 103 (266)
T 3d1l_A 58 YTTDLAEVNPYAKLYIVSLKDS--------A--------FAELLQGIVEGKREEALMVHTAG 103 (266)
T ss_dssp EESCGGGSCSCCSEEEECCCHH--------H--------HHHHHHHHHTTCCTTCEEEECCT
T ss_pred eeCCHHHHhcCCCEEEEecCHH--------H--------HHHHHHHHHhhcCCCcEEEECCC
Confidence 3444556678999999986311 0 23444556555545777777765
No 74
>2i9z_A Putative septation protein spovg; APC86317, staphylococcus epidermidis ATCC 12228, STRU genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus epidermidis} SCOP: d.366.1.1
Probab=42.60 E-value=21 Score=26.80 Aligned_cols=35 Identities=17% Similarity=0.370 Sum_probs=28.5
Q ss_pred CceEEEEeEE-ecCCcEEEeCCCCCCHHHHHHHHHHH
Q 021646 259 EGLIYSFPVT-CEKGEWSIVKGLKVDEFSRAKMDATA 294 (309)
Q Consensus 259 ~~v~~s~Pv~-~~~Gv~~i~~~~~L~~~E~~~l~~s~ 294 (309)
+|.|++.|-. .++|..+-+- .|+|.+-+++|++++
T Consensus 44 ~GlFVaMPSrk~~~GeyrDI~-hPIt~e~Re~i~~aV 79 (105)
T 2i9z_A 44 SGLFVAMPSKRTPDGEFRDIA-HPINSDMRQEIQDAV 79 (105)
T ss_dssp TEEEEECCEEECTTSCEEECE-EESSHHHHHHHHHHH
T ss_pred CceEEECCCcCCCCCCEEEEE-EECCHHHHHHHHHHH
Confidence 5789999986 5888887554 589999999998765
No 75
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=42.13 E-value=53 Score=29.67 Aligned_cols=50 Identities=12% Similarity=0.304 Sum_probs=33.1
Q ss_pred ceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhh----hcCCCcEEEEecCc
Q 021646 45 GVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEK----HAAPNCKVLVVANP 110 (309)
Q Consensus 45 ~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~----~~~p~~~vivvsnP 110 (309)
++...++..+++.+||+||++.-. ..++++...+.. +..|+.+++.++|-
T Consensus 90 ~i~~~~~~~ea~~~aDvVilav~~----------------~~~~~vl~~i~~~~~~~l~~~~ivvs~~~G 143 (375)
T 1yj8_A 90 NIVAHSDLASVINDADLLIFIVPC----------------QYLESVLASIKESESIKIASHAKAISLTKG 143 (375)
T ss_dssp TEEEESSTHHHHTTCSEEEECCCH----------------HHHHHHHHHHTC---CCCCTTCEEEECCCS
T ss_pred CeEEECCHHHHHcCCCEEEEcCCH----------------HHHHHHHHHHhhhhhccCCCCCEEEEeCCc
Confidence 455555556678999999998521 135556666766 55467778877764
No 76
>2ia9_A Putative septation protein spovg; APC85465, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2; 3.00A {Bacillus subtilis} SCOP: d.366.1.1
Probab=40.30 E-value=24 Score=26.26 Aligned_cols=35 Identities=20% Similarity=0.451 Sum_probs=28.6
Q ss_pred CceEEEEeEE-ecCCcEEEeCCCCCCHHHHHHHHHHH
Q 021646 259 EGLIYSFPVT-CEKGEWSIVKGLKVDEFSRAKMDATA 294 (309)
Q Consensus 259 ~~v~~s~Pv~-~~~Gv~~i~~~~~L~~~E~~~l~~s~ 294 (309)
+|.|++.|-. .++|..+-+- .|+|.+-+++|++++
T Consensus 44 ~GlFVaMPSrk~~~Gey~DI~-hPit~e~Re~i~~aV 79 (100)
T 2ia9_A 44 NGLFVAMPSKRTPDGEFRDIT-HPINSSTRGKIQDAV 79 (100)
T ss_dssp TEEEEECCEEECTTSCEEESE-EESSHHHHHHHHHHH
T ss_pred CceEEECCCcCCCCCCEEEEE-EECCHHHHHHHHHHH
Confidence 5789999986 5888887554 589999999998776
No 77
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=39.12 E-value=31 Score=32.07 Aligned_cols=50 Identities=22% Similarity=0.315 Sum_probs=35.7
Q ss_pred CcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEec
Q 021646 43 LKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA 108 (309)
Q Consensus 43 ~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvs 108 (309)
..++..+++..+++++||+||+..= .+-++++..++..+-.++..++.++
T Consensus 102 p~~i~~t~dl~~al~~ad~ii~avP----------------s~~~r~~l~~l~~~~~~~~~iv~~~ 151 (391)
T 4fgw_A 102 PDNLVANPDLIDSVKDVDIIVFNIP----------------HQFLPRICSQLKGHVDSHVRAISCL 151 (391)
T ss_dssp CSSEEEESCHHHHHTTCSEEEECSC----------------GGGHHHHHHHHTTTSCTTCEEEECC
T ss_pred CCCcEEeCCHHHHHhcCCEEEEECC----------------hhhhHHHHHHhccccCCCceeEEec
Confidence 3466777788899999999999742 2345667777777765666666665
No 78
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=37.83 E-value=11 Score=38.15 Aligned_cols=58 Identities=21% Similarity=0.347 Sum_probs=35.2
Q ss_pred hcCCCcEEEEeCCCCCCCCCCHH----H--HHHHhHHHHHHHHHHHhhhcCCCcE-EEEecCchhH
Q 021646 55 ACKDVNIAVMVGGFPRKEGMERK----D--VMSKNVSIYKAQASALEKHAAPNCK-VLVVANPANT 113 (309)
Q Consensus 55 ~l~~aDiVVitag~~~~~~~sr~----~--~~~~N~~i~~~i~~~i~~~~~p~~~-vivvsnPvd~ 113 (309)
..++||++|+..|.+..++.+|. + +-....++++.++....+.+ |+.+ |+..++|+++
T Consensus 441 ~a~~aDvvIv~vg~~~gEg~Dr~~~~~~l~Lp~~q~~LI~~v~~~~~~~~-~~vVVVl~~g~P~~l 505 (721)
T 2x41_A 441 LAKKNDVAVIVISRISGEGYDRKPVKGDFYLSDDETDLIKTVSREFHEQG-KKVIVLLNIGSPVEV 505 (721)
T ss_dssp HHHHCSEEEEEEECCCBTTCCCCSSBTTTBCCHHHHHHHHHHHHHHHHTT-CCEEEEEECSSCCCC
T ss_pred HHhcCCEEEEEEeccccccccccCCCCCccCCHHHHHHHHHHHHHHHHhC-CCEEEEEecCCceEc
Confidence 45789999999987755555554 2 22223345555543333666 5655 4446789976
No 79
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=37.77 E-value=24 Score=29.47 Aligned_cols=69 Identities=6% Similarity=-0.017 Sum_probs=40.0
Q ss_pred EEEE-EecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHH
Q 021646 15 ILHM-LDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASA 93 (309)
Q Consensus 15 ~l~L-~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~ 93 (309)
++.+ +|++ .++++..+.++. .....+..++++++|+||++.- + ..++++...
T Consensus 48 ~V~~v~~r~--~~~~~~l~~~~g---------~~~~~~~~~~~~~aDvVilavp----~------------~~~~~v~~~ 100 (220)
T 4huj_A 48 PAIIANSRG--PASLSSVTDRFG---------ASVKAVELKDALQADVVILAVP----Y------------DSIADIVTQ 100 (220)
T ss_dssp CEEEECTTC--GGGGHHHHHHHT---------TTEEECCHHHHTTSSEEEEESC----G------------GGHHHHHTT
T ss_pred EEEEEECCC--HHHHHHHHHHhC---------CCcccChHHHHhcCCEEEEeCC----h------------HHHHHHHHH
Confidence 3455 8886 455554444332 1112245667899999999862 1 122334444
Q ss_pred HhhhcCCCcEEEEecCchh
Q 021646 94 LEKHAAPNCKVLVVANPAN 112 (309)
Q Consensus 94 i~~~~~p~~~vivvsnPvd 112 (309)
+.. . ++.+++-++||+.
T Consensus 101 l~~-~-~~~ivi~~~~g~~ 117 (220)
T 4huj_A 101 VSD-W-GGQIVVDASNAID 117 (220)
T ss_dssp CSC-C-TTCEEEECCCCBC
T ss_pred hhc-c-CCCEEEEcCCCCC
Confidence 444 3 4668888999985
No 80
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=37.54 E-value=47 Score=28.69 Aligned_cols=41 Identities=10% Similarity=0.120 Sum_probs=26.0
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCC
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGG 67 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag 67 (309)
++.++|++ .++++. +... ++...++..+.+++||+||++..
T Consensus 26 ~V~~~dr~--~~~~~~----~~~~------g~~~~~~~~~~~~~aDvvi~~vp 66 (287)
T 3pef_A 26 SVTIWNRS--PEKAEE----LAAL------GAERAATPCEVVESCPVTFAMLA 66 (287)
T ss_dssp EEEEECSS--GGGGHH----HHHT------TCEECSSHHHHHHHCSEEEECCS
T ss_pred eEEEEcCC--HHHHHH----HHHC------CCeecCCHHHHHhcCCEEEEEcC
Confidence 56789997 334332 2221 34455566777889999999863
No 81
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=37.02 E-value=40 Score=25.70 Aligned_cols=70 Identities=11% Similarity=0.116 Sum_probs=42.1
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASAL 94 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i 94 (309)
++.++|.+ .++++..+..+. ..+....+..+.+.++|+||.+.+.+. +-...
T Consensus 46 ~v~v~~r~--~~~~~~~a~~~~-------~~~~~~~~~~~~~~~~Divi~at~~~~-~~~~~------------------ 97 (144)
T 3oj0_A 46 KVTVAGRN--IDHVRAFAEKYE-------YEYVLINDIDSLIKNNDVIITATSSKT-PIVEE------------------ 97 (144)
T ss_dssp EEEEEESC--HHHHHHHHHHHT-------CEEEECSCHHHHHHTCSEEEECSCCSS-CSBCG------------------
T ss_pred EEEEEcCC--HHHHHHHHHHhC-------CceEeecCHHHHhcCCCEEEEeCCCCC-cEeeH------------------
Confidence 48899997 445554444433 122234456677899999999887652 11111
Q ss_pred hhhcCCCcEEEEecCchhH
Q 021646 95 EKHAAPNCKVLVVANPANT 113 (309)
Q Consensus 95 ~~~~~p~~~vivvsnPvd~ 113 (309)
.... |+.+++-+++|.|+
T Consensus 98 ~~l~-~g~~vid~~~p~~~ 115 (144)
T 3oj0_A 98 RSLM-PGKLFIDLGNPPNI 115 (144)
T ss_dssp GGCC-TTCEEEECCSSCSB
T ss_pred HHcC-CCCEEEEccCCccC
Confidence 1122 46788889998765
No 82
>1bb1_B Designed, thermostable heterotrimeric coiled coil; de novo protein design; 1.80A {Synthetic construct} SCOP: k.7.1.1
Probab=35.71 E-value=57 Score=18.62 Aligned_cols=21 Identities=14% Similarity=0.210 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 021646 284 EFSRAKMDATAEELAEEKTLA 304 (309)
Q Consensus 284 ~~E~~~l~~s~~~i~~~i~~~ 304 (309)
++|++.+++-.+.+++++...
T Consensus 8 keeqaaieeeiqaikeeiaai 28 (36)
T 1bb1_B 8 KEEQAAIEEEIQAIKEEIAAI 28 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 578889998888898888654
No 83
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=34.62 E-value=62 Score=26.62 Aligned_cols=51 Identities=18% Similarity=0.271 Sum_probs=30.7
Q ss_pred CCCcEEEEeCCCCCCCCC--CHHHHHHHhHHHHHHHHHHHhhhc----CCCcEEEEecCc
Q 021646 57 KDVNIAVMVGGFPRKEGM--ERKDVMSKNVSIYKAQASALEKHA----APNCKVLVVANP 110 (309)
Q Consensus 57 ~~aDiVVitag~~~~~~~--sr~~~~~~N~~i~~~i~~~i~~~~----~p~~~vivvsnP 110 (309)
+.+|+|||..|..---.. ...+.+..| ++.++..+.+.. .|++.|++++.|
T Consensus 100 ~p~d~VvI~~GtND~~~~~~~~~~~~~~~---l~~li~~ir~~~~~~~~p~~~iil~~p~ 156 (232)
T 3dci_A 100 MPLDLVIIMLGTNDIKPVHGGRAEAAVSG---MRRLAQIVETFIYKPREAVPKLLIVAPP 156 (232)
T ss_dssp CSCSEEEEECCTTTTSGGGTSSHHHHHHH---HHHHHHHHHHCCCSSTTCCCEEEEEECC
T ss_pred CCCCEEEEEeccCCCccccCCCHHHHHHH---HHHHHHHHHHhcccccCCCCeEEEEeCC
Confidence 346999999996532111 123334434 567777777753 157888888754
No 84
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=34.00 E-value=1.7e+02 Score=27.26 Aligned_cols=54 Identities=11% Similarity=0.145 Sum_probs=30.8
Q ss_pred cCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEec-CchhH
Q 021646 56 CKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA-NPANT 113 (309)
Q Consensus 56 l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvs-nPvd~ 113 (309)
+++||+||++-+.|..++... ..+..-++..+..|.++-.|+.+|+.-| -|+..
T Consensus 81 ~~~aDvvii~VpTp~~~~~~~----~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgt 135 (431)
T 3ojo_A 81 PEASDVFIIAVPTPNNDDQYR----SCDISLVMRALDSILPFLKKGNTIIVESTIAPKT 135 (431)
T ss_dssp CCCCSEEEECCCCCBCSSSSC----BBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTH
T ss_pred hhhCCEEEEEeCCCccccccC----CccHHHHHHHHHHHHHhCCCCCEEEEecCCChhH
Confidence 568999999988775432100 1233444455566777654555555544 35543
No 85
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=33.91 E-value=1.6e+02 Score=23.19 Aligned_cols=64 Identities=13% Similarity=-0.024 Sum_probs=41.2
Q ss_pred CCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCcEEEech
Q 021646 57 KDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTR 135 (309)
Q Consensus 57 ~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~ig~gt~ 135 (309)
.++|+|.+++-.. .+.+.+++++..+++.+.++..|++.+.|.+--... ++. -|.+ ..++.++.
T Consensus 68 ~~~diV~lS~~~~------------~~~~~~~~~i~~L~~~g~~~i~v~vGG~~~~~~~~~-l~~-~G~d-~v~~~~~~ 131 (161)
T 2yxb_A 68 EDVDVIGVSILNG------------AHLHLMKRLMAKLRELGADDIPVVLGGTIPIPDLEP-LRS-LGIR-EIFLPGTS 131 (161)
T ss_dssp TTCSEEEEEESSS------------CHHHHHHHHHHHHHHTTCTTSCEEEEECCCHHHHHH-HHH-TTCC-EEECTTCC
T ss_pred cCCCEEEEEeech------------hhHHHHHHHHHHHHhcCCCCCEEEEeCCCchhcHHH-HHH-CCCc-EEECCCCC
Confidence 5899999987543 345677888888888764577788888876533222 334 3654 22444664
No 86
>1bb1_A Designed, thermostable heterotrimeric coiled coil; de novo protein design; 1.80A {Synthetic construct} SCOP: k.7.1.1 PDB: 1bb1_C 1u0i_B
Probab=33.64 E-value=68 Score=18.28 Aligned_cols=24 Identities=8% Similarity=0.209 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh
Q 021646 284 EFSRAKMDATAEELAEEKTLAYSC 307 (309)
Q Consensus 284 ~~E~~~l~~s~~~i~~~i~~~~~~ 307 (309)
+.|++.+++-...+++.+....+|
T Consensus 8 eyeqaaikeeiaaikdkiaaikey 31 (36)
T 1bb1_A 8 EYEQAAIKEEIAAIKDKIAAIKEY 31 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578888888888888887766554
No 87
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=32.28 E-value=1e+02 Score=27.07 Aligned_cols=53 Identities=15% Similarity=0.183 Sum_probs=35.2
Q ss_pred hhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhHHHHHHHHH
Q 021646 52 VVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEF 121 (309)
Q Consensus 52 ~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~~t~~~~~~ 121 (309)
+.+++.++|+||++.-.. . ++++...+..+..|+.+|+.++|.++... .+.+.
T Consensus 80 ~~~~~~~~D~vilavk~~-----~-----------~~~~l~~l~~~l~~~~~iv~~~nGi~~~~-~l~~~ 132 (318)
T 3hwr_A 80 DPSAVQGADLVLFCVKST-----D-----------TQSAALAMKPALAKSALVLSLQNGVENAD-TLRSL 132 (318)
T ss_dssp CGGGGTTCSEEEECCCGG-----G-----------HHHHHHHHTTTSCTTCEEEEECSSSSHHH-HHHHH
T ss_pred CHHHcCCCCEEEEEcccc-----c-----------HHHHHHHHHHhcCCCCEEEEeCCCCCcHH-HHHHH
Confidence 345678999999986322 1 24445566666556788888999987754 34444
No 88
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=32.20 E-value=81 Score=25.78 Aligned_cols=48 Identities=17% Similarity=0.167 Sum_probs=32.5
Q ss_pred CCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCc
Q 021646 57 KDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANP 110 (309)
Q Consensus 57 ~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnP 110 (309)
.+.|+|||..|..--. .+ .+.+ ..-++.++..+.+.. |++.|++++.|
T Consensus 92 ~~pd~vvi~~G~ND~~-~~-~~~~---~~~l~~~i~~l~~~~-p~~~ii~~~~~ 139 (232)
T 1es9_A 92 IRPKIVVVWVGTNNHG-HT-AEQV---TGGIKAIVQLVNERQ-PQARVVVLGLL 139 (232)
T ss_dssp CCCSEEEEECCTTCTT-SC-HHHH---HHHHHHHHHHHHHHS-TTCEEEEECCC
T ss_pred CCCCEEEEEeecCCCC-CC-HHHH---HHHHHHHHHHHHHHC-CCCeEEEecCC
Confidence 3789999999875322 22 2223 344677888888876 78888888854
No 89
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=31.66 E-value=1.6e+02 Score=24.72 Aligned_cols=53 Identities=15% Similarity=0.313 Sum_probs=33.7
Q ss_pred CCCcEEEEeCCCCCCC---CCCH---HHHHHHhHHH----HHHHHHHHhhhcCCCcEEEEecC
Q 021646 57 KDVNIAVMVGGFPRKE---GMER---KDVMSKNVSI----YKAQASALEKHAAPNCKVLVVAN 109 (309)
Q Consensus 57 ~~aDiVVitag~~~~~---~~sr---~~~~~~N~~i----~~~i~~~i~~~~~p~~~vivvsn 109 (309)
...|+||-.||..... ..+. ...+..|..- .+.+.+.+.+...+.+.|+.++.
T Consensus 110 g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS 172 (279)
T 1xg5_A 110 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININS 172 (279)
T ss_dssp CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECC
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcC
Confidence 3799999999975321 1232 4456667655 77778888776422366777663
No 90
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=31.55 E-value=38 Score=27.21 Aligned_cols=48 Identities=8% Similarity=0.092 Sum_probs=31.1
Q ss_pred CCcEEEEeCCCCCC-CCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCc
Q 021646 58 DVNIAVMVGGFPRK-EGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANP 110 (309)
Q Consensus 58 ~aDiVVitag~~~~-~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnP 110 (309)
+.|+|||..|..-- .+.+.. .+ ..-++.++..+.+.+ |++.|++++.|
T Consensus 85 ~pd~vvi~~G~ND~~~~~~~~-~~---~~~l~~~i~~l~~~~-p~~~iil~~~~ 133 (214)
T 2hsj_A 85 AVDKIFLLIGTNDIGKDVPVN-EA---LNNLEAIIQSVARDY-PLTEIKLLSIL 133 (214)
T ss_dssp CCCEEEEECCHHHHHTTCCHH-HH---HHHHHHHHHHHHHHC-TTCEEEEECCC
T ss_pred CCCEEEEEEecCcCCcCCCHH-HH---HHHHHHHHHHHHHhC-CCCeEEEEecC
Confidence 57999999885311 122322 22 344677788888886 78888888744
No 91
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=31.45 E-value=1.1e+02 Score=26.50 Aligned_cols=67 Identities=16% Similarity=0.225 Sum_probs=36.4
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASAL 94 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i 94 (309)
++.++|+++ ++++.. ... ++...++..+.++ ||+||++...+ ..++++...+
T Consensus 40 ~V~~~dr~~--~~~~~~----~~~------g~~~~~~~~~~~~-aDvvi~~vp~~---------------~~~~~v~~~l 91 (296)
T 3qha_A 40 GVTVYDIRI--EAMTPL----AEA------GATLADSVADVAA-ADLIHITVLDD---------------AQVREVVGEL 91 (296)
T ss_dssp CEEEECSST--TTSHHH----HHT------TCEECSSHHHHTT-SSEEEECCSSH---------------HHHHHHHHHH
T ss_pred eEEEEeCCH--HHHHHH----HHC------CCEEcCCHHHHHh-CCEEEEECCCh---------------HHHHHHHHHH
Confidence 467889973 343322 111 2344555566666 99999986421 1133344555
Q ss_pred hhhcCCCcEEEEecC
Q 021646 95 EKHAAPNCKVLVVAN 109 (309)
Q Consensus 95 ~~~~~p~~~vivvsn 109 (309)
..+..|+.+++..|+
T Consensus 92 ~~~l~~g~ivv~~st 106 (296)
T 3qha_A 92 AGHAKPGTVIAIHST 106 (296)
T ss_dssp HTTCCTTCEEEECSC
T ss_pred HHhcCCCCEEEEeCC
Confidence 555445666665554
No 92
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=31.02 E-value=1.2e+02 Score=25.78 Aligned_cols=48 Identities=17% Similarity=0.107 Sum_probs=37.3
Q ss_pred CCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEec
Q 021646 58 DVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA 108 (309)
Q Consensus 58 ~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvs 108 (309)
++|+||-+++.......+..+.+..|..-...++..+.+.+ . .++.+|
T Consensus 68 ~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~--~~v~~S 115 (310)
T 1eq2_A 68 DVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I--PFLYAS 115 (310)
T ss_dssp SCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C--CEEEEE
T ss_pred CCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEe
Confidence 49999999997644345677888999999999999998875 3 455555
No 93
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=30.72 E-value=53 Score=30.02 Aligned_cols=20 Identities=15% Similarity=0.250 Sum_probs=16.0
Q ss_pred ceeecCChhhhcCCCcEEEE
Q 021646 45 GVVATTDVVEACKDVNIAVM 64 (309)
Q Consensus 45 ~~~~~~~~~~~l~~aDiVVi 64 (309)
.+.+..+..+++++||||..
T Consensus 237 ~v~~~~d~~eav~~aDvvyt 256 (358)
T 4h31_A 237 KITLTENVAEGVQGCDFLYT 256 (358)
T ss_dssp EEEEESCHHHHHTTCSEEEE
T ss_pred cceeccCHHHHhccCcEEEE
Confidence 46667778899999999874
No 94
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=30.44 E-value=95 Score=26.80 Aligned_cols=41 Identities=20% Similarity=0.396 Sum_probs=26.1
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCC
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGG 67 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag 67 (309)
++.++|++ .++++ .+... ++...++..+.+++||+||++..
T Consensus 28 ~V~~~d~~--~~~~~----~~~~~------g~~~~~~~~~~~~~aDvvi~~vp 68 (302)
T 2h78_A 28 LLNVFDLV--QSAVD----GLVAA------GASAARSARDAVQGADVVISMLP 68 (302)
T ss_dssp EEEEECSS--HHHHH----HHHHT------TCEECSSHHHHHTTCSEEEECCS
T ss_pred eEEEEcCC--HHHHH----HHHHC------CCeEcCCHHHHHhCCCeEEEECC
Confidence 57789996 33332 22221 24455566778899999999863
No 95
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=30.44 E-value=1.5e+02 Score=25.46 Aligned_cols=55 Identities=7% Similarity=0.003 Sum_probs=39.2
Q ss_pred hhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecC
Q 021646 53 VEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVAN 109 (309)
Q Consensus 53 ~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsn 109 (309)
.+.++++|+||-+|+.... +.+..+.+..|..-...+...+.+.. ....++.+|.
T Consensus 78 ~~~~~~~d~vih~A~~~~~-~~~~~~~~~~n~~g~~~ll~~~~~~~-~~~~iv~~SS 132 (342)
T 1y1p_A 78 DEVIKGAAGVAHIASVVSF-SNKYDEVVTPAIGGTLNALRAAAATP-SVKRFVLTSS 132 (342)
T ss_dssp TTTTTTCSEEEECCCCCSC-CSCHHHHHHHHHHHHHHHHHHHHTCT-TCCEEEEECC
T ss_pred HHHHcCCCEEEEeCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHhCC-CCcEEEEecc
Confidence 3456689999999987542 34667788899999899888887532 2345666664
No 96
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=30.17 E-value=86 Score=27.33 Aligned_cols=54 Identities=15% Similarity=0.183 Sum_probs=40.2
Q ss_pred hhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEec
Q 021646 53 VEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA 108 (309)
Q Consensus 53 ~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvs 108 (309)
.+.++++|+||-+|+..........+.+..|..-...++..+.+.+ .. .+|.+|
T Consensus 72 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~-~~V~~S 125 (347)
T 4id9_A 72 SDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAG-VR-RFVFAS 125 (347)
T ss_dssp HHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTT-CS-EEEEEE
T ss_pred HHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcC-CC-eEEEEC
Confidence 4567899999999987644334447788899999999999998875 23 455555
No 97
>1r2q_A RAS-related protein RAB-5A; GTPase, GNP, atomic resolution, protein transport; HET: GNP; 1.05A {Homo sapiens} SCOP: c.37.1.8 PDB: 1n6h_A* 1tu4_A* 1tu3_A* 1n6k_A* 1n6i_A* 1n6l_A* 1n6o_A* 1n6p_A* 1n6n_A* 1n6r_A* 3mjh_A* 1z0d_A* 1huq_A* 2hei_A* 1z07_A*
Probab=29.98 E-value=1e+02 Score=23.07 Aligned_cols=51 Identities=18% Similarity=0.239 Sum_probs=30.2
Q ss_pred hhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhH
Q 021646 53 VEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANT 113 (309)
Q Consensus 53 ~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~ 113 (309)
...+.++|++|+.-.... +.. + .-+..+...+.++..++..++++.|-.|.
T Consensus 73 ~~~~~~~d~~i~v~d~~~-----~~s-~----~~~~~~~~~~~~~~~~~~~iilv~nK~Dl 123 (170)
T 1r2q_A 73 PMYYRGAQAAIVVYDITN-----EES-F----ARAKNWVKELQRQASPNIVIALSGNKADL 123 (170)
T ss_dssp HHHHTTCSEEEEEEETTC-----HHH-H----HHHHHHHHHHHHHSCTTCEEEEEEECGGG
T ss_pred HHhccCCCEEEEEEECCC-----HHH-H----HHHHHHHHHHHHhcCCCCcEEEEEECccC
Confidence 344678888888754321 211 1 12234444555554467778888999997
No 98
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=29.95 E-value=17 Score=36.51 Aligned_cols=59 Identities=17% Similarity=0.179 Sum_probs=34.9
Q ss_pred hhcCCCcEEEEeCCCCCCCCC--------CHHHH-HHHhHHHHHHHHHHHhhhcCCCcEE-EEecCchhHHHH
Q 021646 54 EACKDVNIAVMVGGFPRKEGM--------ERKDV-MSKNVSIYKAQASALEKHAAPNCKV-LVVANPANTNAL 116 (309)
Q Consensus 54 ~~l~~aDiVVitag~~~~~~~--------sr~~~-~~~N~~i~~~i~~~i~~~~~p~~~v-ivvsnPvd~~t~ 116 (309)
+..++||++|+..|....++. +|.++ +..+ -.+++..+.+.+ |+.+| ++.++|+++..+
T Consensus 423 ~~A~~aDv~Iv~vg~~~gEg~~~~~g~~gDR~~l~Lp~~---Q~~Li~~v~~~~-~~~VVVl~sG~p~~~~~w 491 (713)
T 3zyz_A 423 SAARGKDVAIVFITADSGEGYITVEGNAGDRNNLDPWHN---GNALVQAVAGAN-SNVIVVVHSVGAIILEQI 491 (713)
T ss_dssp HHHTTCSEEEEEEEECCBCTTCCBTTBCSSCSCSSCSTT---HHHHHHHHHHHC-SCEEEEEEESSCCCCHHH
T ss_pred HHhhcCCEEEEEecccCCCCccccccCCCCcccccCChh---HHHHHHHHHHhC-CCeEEEEecCCcccchhh
Confidence 346899999998876543443 45332 1111 135667777777 45554 445689976443
No 99
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=29.49 E-value=61 Score=27.89 Aligned_cols=42 Identities=14% Similarity=0.135 Sum_probs=28.0
Q ss_pred cCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhH
Q 021646 56 CKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANT 113 (309)
Q Consensus 56 l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~ 113 (309)
++++|+||++.... .++++...+..+..|+.+++.++|..+.
T Consensus 72 ~~~~d~vi~~v~~~----------------~~~~v~~~l~~~l~~~~~iv~~~~g~~~ 113 (316)
T 2ew2_A 72 NEQVDLIIALTKAQ----------------QLDAMFKAIQPMITEKTYVLCLLNGLGH 113 (316)
T ss_dssp SCCCSEEEECSCHH----------------HHHHHHHHHGGGCCTTCEEEECCSSSCT
T ss_pred CCCCCEEEEEeccc----------------cHHHHHHHHHHhcCCCCEEEEecCCCCc
Confidence 44999999986311 1244556666665467788888887764
No 100
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=29.48 E-value=1.2e+02 Score=26.52 Aligned_cols=48 Identities=17% Similarity=0.107 Sum_probs=37.3
Q ss_pred CCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEec
Q 021646 58 DVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA 108 (309)
Q Consensus 58 ~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvs 108 (309)
++|+||-+|+.......+..+.++.|..-...++..+.+.+ . .++.+|
T Consensus 115 ~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~--r~V~~S 162 (357)
T 2x6t_A 115 DVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I--PFLYAS 162 (357)
T ss_dssp SCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C--CEEEEE
T ss_pred CCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEc
Confidence 59999999997644345677888999999999999998875 3 455555
No 101
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=29.37 E-value=71 Score=27.73 Aligned_cols=55 Identities=9% Similarity=0.117 Sum_probs=33.7
Q ss_pred hhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecC
Q 021646 53 VEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVAN 109 (309)
Q Consensus 53 ~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsn 109 (309)
.+.++++|+||-+++.......+..+.+..|..-...++..+.+.+. ..++.+|.
T Consensus 72 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~~v~~SS 126 (342)
T 2x4g_A 72 ERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARV--PRILYVGS 126 (342)
T ss_dssp HHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTC--SCEEEECC
T ss_pred HHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCC--CeEEEECC
Confidence 45678999999999865422345566788999999999999888752 34666664
No 102
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=28.19 E-value=46 Score=33.58 Aligned_cols=90 Identities=11% Similarity=0.130 Sum_probs=53.8
Q ss_pred ceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhHHHHHHHHHCCC
Q 021646 45 GVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPS 124 (309)
Q Consensus 45 ~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~ 124 (309)
.++.. .+++++++||+||=+. .+|.++=+++-.++.++++|++ |++||-.-+...-+.+.++.
T Consensus 381 ~~~~~-~~~~~l~~aDlVIEAV--------------~E~l~iK~~vf~~le~~~~~~a--IlASNTSsl~i~~ia~~~~~ 443 (742)
T 3zwc_A 381 KLRFS-SSTKELSTVDLVVEAV--------------FEDMNLKKKVFAELSALCKPGA--FLCTNTSALNVDDIASSTDR 443 (742)
T ss_dssp CEEEE-SCGGGGGSCSEEEECC--------------CSCHHHHHHHHHHHHHHSCTTC--EEEECCSSSCHHHHHTTSSC
T ss_pred hhccc-CcHHHHhhCCEEEEec--------------cccHHHHHHHHHHHhhcCCCCc--eEEecCCcCChHHHHhhcCC
Confidence 34444 4678899999987543 2466777888888999998786 56777433322222222110
Q ss_pred ---------C-CCCc-----EE--EechhHHHHHHHHHHHHhCC
Q 021646 125 ---------I-PAKN-----IT--CLTRLDHNRAMGQISERLKV 151 (309)
Q Consensus 125 ---------~-~~~~-----ig--~gt~lds~R~~~~la~~l~v 151 (309)
| |++. |. ..|.-++...-..+++++|-
T Consensus 444 p~r~ig~HFfnP~~~m~LVEvi~g~~Ts~e~~~~~~~~~~~lgK 487 (742)
T 3zwc_A 444 PQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGK 487 (742)
T ss_dssp GGGEEEEECCSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTC
T ss_pred ccccccccccCCCCCCceEEEecCCCCCHHHHHHHHHHHHHhCC
Confidence 1 2221 22 23666666666667888873
No 103
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=27.80 E-value=50 Score=28.11 Aligned_cols=46 Identities=9% Similarity=0.036 Sum_probs=30.2
Q ss_pred hhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhH
Q 021646 52 VVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANT 113 (309)
Q Consensus 52 ~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~ 113 (309)
+.+.+.++|+||++...+. +.++...+..+..|+.+++.++|.++.
T Consensus 57 ~~~~~~~~d~vi~~v~~~~----------------~~~v~~~l~~~l~~~~~vv~~~~g~~~ 102 (291)
T 1ks9_A 57 DPDFLATSDLLLVTLKAWQ----------------VSDAVKSLASTLPVTTPILLIHNGMGT 102 (291)
T ss_dssp CHHHHHTCSEEEECSCGGG----------------HHHHHHHHHTTSCTTSCEEEECSSSCT
T ss_pred CccccCCCCEEEEEecHHh----------------HHHHHHHHHhhCCCCCEEEEecCCCCc
Confidence 4567889999999875321 233444555554467778888887754
No 104
>2iwr_A Centaurin gamma 1; ANK repeat, zinc-finger, GTP-binding, polymorphism, nucleotide-binding, alternative splicing, protein transport; HET: CAF; 1.5A {Homo sapiens} PDB: 2bmj_A
Probab=27.80 E-value=1.4e+02 Score=22.82 Aligned_cols=53 Identities=13% Similarity=0.140 Sum_probs=31.1
Q ss_pred hhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhH
Q 021646 54 EACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANT 113 (309)
Q Consensus 54 ~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~ 113 (309)
..++++|++|+.-... ++.. + .++....+....+..++.++..++++.|-.|.
T Consensus 68 ~~~~~~d~~ilv~D~~-----~~~s-~-~~~~~~~~~i~~~~~~~~~~~piilv~nK~Dl 120 (178)
T 2iwr_A 68 KFSGWADAVIFVFSLE-----DENS-F-QAVSRLHGQLSSLRGEGRGGLALALVGTQDRI 120 (178)
T ss_dssp HHHHHCSEEEEEEETT-----CHHH-H-HHHHHHHHHHHHHHCSSSCCCEEEEEEECTTC
T ss_pred HHHHhCCEEEEEEECc-----CHHH-H-HHHHHHHHHHHHHHhcCCCCCCEEEEEECccc
Confidence 4466789888876533 2222 2 23333333445555554356778888998886
No 105
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=27.70 E-value=1.8e+02 Score=23.58 Aligned_cols=47 Identities=13% Similarity=0.193 Sum_probs=31.6
Q ss_pred CCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecC
Q 021646 57 KDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVAN 109 (309)
Q Consensus 57 ~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsn 109 (309)
.+.|+|||..|..-- +.+..+ +. .-++.++..+.+.. |++.|++++-
T Consensus 93 ~~pd~vvi~~G~ND~-~~~~~~-~~---~~l~~~i~~l~~~~-p~~~iil~~~ 139 (229)
T 1fxw_F 93 IKPKVIVVWVGTNNH-ENTAEE-VA---GGIEAIVQLINTRQ-PQAKIIVLGL 139 (229)
T ss_dssp CCCSEEEEECCTTCT-TSCHHH-HH---HHHHHHHHHHHHHC-TTCEEEEECC
T ss_pred CCCCEEEEEEecCCC-CCCHHH-HH---HHHHHHHHHHHHHC-CCCeEEEEeC
Confidence 367999999987643 333332 33 34677778888775 7888887773
No 106
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=27.24 E-value=1.7e+02 Score=24.24 Aligned_cols=52 Identities=13% Similarity=0.171 Sum_probs=38.5
Q ss_pred hhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEec
Q 021646 53 VEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA 108 (309)
Q Consensus 53 ~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvs 108 (309)
.+.+++.|+||-++|.. ...+..+.+..|..-...++..+.+.+ ...++.+|
T Consensus 58 ~~~~~~~d~vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~iv~~S 109 (267)
T 3ay3_A 58 HDLVKDCDGIIHLGGVS--VERPWNDILQANIIGAYNLYEAARNLG--KPRIVFAS 109 (267)
T ss_dssp HHHHTTCSEEEECCSCC--SCCCHHHHHHHTHHHHHHHHHHHHHTT--CCEEEEEE
T ss_pred HHHHcCCCEEEECCcCC--CCCCHHHHHHHHHHHHHHHHHHHHHhC--CCEEEEeC
Confidence 45678899999999875 234567788899998899988888764 23455555
No 107
>3npg_A Uncharacterized DUF364 family protein; protein with unknown function from DUF364 family, structural genomics; 2.70A {Pyrococcus horikoshii}
Probab=27.23 E-value=57 Score=28.19 Aligned_cols=72 Identities=7% Similarity=0.151 Sum_probs=43.7
Q ss_pred hhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcE-EEEecCchhHHHHHHHHHCCCCCCCcEEE
Q 021646 54 EACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCK-VLVVANPANTNALILKEFAPSIPAKNITC 132 (309)
Q Consensus 54 ~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~-vivvsnPvd~~t~~~~~~~~~~~~~~ig~ 132 (309)
+.+..||+|+||+.. +.. .-.+.+-+.+ +++. +++++ |--.|.+.+. .++.-..+++
T Consensus 160 ~~l~~~D~v~iTGsT----------lvN-------~Ti~~lL~~~-~~~~~vvl~G-PS~~~~P~~~---~~~Gv~~l~g 217 (249)
T 3npg_A 160 HILPEVDGIIASASC----------IVN-------GTLDMILDRA-KKAKLIVITG-PTGQLLPEFL---KGTKVTHLAS 217 (249)
T ss_dssp HHGGGCSEEEEETTH----------HHH-------TCHHHHHHHC-SSCSEEEEES-GGGCSCGGGG---TTSSCCEEEE
T ss_pred hhhccCCEEEEEeee----------ecc-------CCHHHHHHhC-cccCeEEEEe-cCchhhHHHH---hhCCccEEEE
Confidence 578999999999752 222 2223344455 3444 45555 6655555433 2344556766
Q ss_pred echhHHHHHHHHHHH
Q 021646 133 LTRLDHNRAMGQISE 147 (309)
Q Consensus 133 gt~lds~R~~~~la~ 147 (309)
.-..|..++...+++
T Consensus 218 ~~v~d~~~~l~~i~~ 232 (249)
T 3npg_A 218 MKVTNIEKALVKLKL 232 (249)
T ss_dssp EEESCHHHHHHHHHH
T ss_pred EEecCHHHHHHHHHc
Confidence 667899988888854
No 108
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=26.92 E-value=83 Score=26.44 Aligned_cols=52 Identities=17% Similarity=0.208 Sum_probs=32.4
Q ss_pred CCCcEEEEeCCCCCCC---CCCH---HHHHHHhH----HHHHHHHHHHhhhcCCCcEEEEecC
Q 021646 57 KDVNIAVMVGGFPRKE---GMER---KDVMSKNV----SIYKAQASALEKHAAPNCKVLVVAN 109 (309)
Q Consensus 57 ~~aDiVVitag~~~~~---~~sr---~~~~~~N~----~i~~~i~~~i~~~~~p~~~vivvsn 109 (309)
...|++|-.||..... ..+. .+.+..|. .+.+...+.+.+.. +.+.|+.+|.
T Consensus 81 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS 142 (259)
T 4e6p_A 81 GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQG-RGGKIINMAS 142 (259)
T ss_dssp SSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCEEEEEECC
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEECC
Confidence 3899999999975321 1233 33455664 35666667766654 3667777764
No 109
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=26.80 E-value=1.5e+02 Score=24.93 Aligned_cols=52 Identities=12% Similarity=0.132 Sum_probs=39.1
Q ss_pred hhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEec
Q 021646 53 VEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA 108 (309)
Q Consensus 53 ~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvs 108 (309)
.+.+++.|+||-.||.. ......+.++.|..-...+...+.+.+ .+.||.+|
T Consensus 59 ~~~~~~~D~vi~~Ag~~--~~~~~~~~~~~N~~g~~~l~~a~~~~~--~~~iv~~S 110 (267)
T 3rft_A 59 NAMVAGCDGIVHLGGIS--VEKPFEQILQGNIIGLYNLYEAARAHG--QPRIVFAS 110 (267)
T ss_dssp HHHHTTCSEEEECCSCC--SCCCHHHHHHHHTHHHHHHHHHHHHTT--CCEEEEEE
T ss_pred HHHHcCCCEEEECCCCc--CcCCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEc
Confidence 44577899999999974 234567788999999999999998875 33455555
No 110
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=26.68 E-value=1.1e+02 Score=24.52 Aligned_cols=47 Identities=26% Similarity=0.290 Sum_probs=33.9
Q ss_pred hhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecC
Q 021646 54 EACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVAN 109 (309)
Q Consensus 54 ~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsn 109 (309)
+++.++|+||.++|.+... ...|....+.+++.+.+.+ ...++++|.
T Consensus 57 ~~~~~~d~vi~~ag~~~~~-------~~~~~~~~~~l~~a~~~~~--~~~~v~~SS 103 (221)
T 3ew7_A 57 SDLSDQNVVVDAYGISPDE-------AEKHVTSLDHLISVLNGTV--SPRLLVVGG 103 (221)
T ss_dssp HHHTTCSEEEECCCSSTTT-------TTSHHHHHHHHHHHHCSCC--SSEEEEECC
T ss_pred hhhcCCCEEEECCcCCccc-------cchHHHHHHHHHHHHHhcC--CceEEEEec
Confidence 6789999999999985421 2347788888888888864 345666653
No 111
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=26.52 E-value=76 Score=27.29 Aligned_cols=41 Identities=10% Similarity=0.213 Sum_probs=25.5
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCC
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGG 67 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag 67 (309)
++.++|++ .++++.. ... +.....+..+.+++||+||++..
T Consensus 26 ~V~~~dr~--~~~~~~~----~~~------g~~~~~~~~~~~~~advvi~~v~ 66 (287)
T 3pdu_A 26 DVTVWNRN--PAKCAPL----VAL------GARQASSPAEVCAACDITIAMLA 66 (287)
T ss_dssp CEEEECSS--GGGGHHH----HHH------TCEECSCHHHHHHHCSEEEECCS
T ss_pred eEEEEcCC--HHHHHHH----HHC------CCeecCCHHHHHHcCCEEEEEcC
Confidence 46789997 3444322 111 23445566777889999999864
No 112
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=26.20 E-value=2e+02 Score=24.40 Aligned_cols=57 Identities=12% Similarity=0.165 Sum_probs=41.9
Q ss_pred ChhhhcCCCcEEEEeCCCCCC--CCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecC
Q 021646 51 DVVEACKDVNIAVMVGGFPRK--EGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVAN 109 (309)
Q Consensus 51 ~~~~~l~~aDiVVitag~~~~--~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsn 109 (309)
...+.++++|+||-+|+.+.. ......+.+..|..-...++..+.+.+ .. .++.+|.
T Consensus 56 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~-~iv~~SS 114 (313)
T 3ehe_A 56 DIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAG-VS-RIVFTST 114 (313)
T ss_dssp CCHHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHT-CC-EEEEECC
T ss_pred HHHHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CC-eEEEeCc
Confidence 345667899999999986432 235667888999999999999988875 23 5666663
No 113
>1z0j_A RAB-22, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Mus musculus} SCOP: c.37.1.8 PDB: 1yvd_A*
Probab=25.63 E-value=1e+02 Score=23.12 Aligned_cols=50 Identities=18% Similarity=0.276 Sum_probs=29.7
Q ss_pred hhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhH
Q 021646 54 EACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANT 113 (309)
Q Consensus 54 ~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~ 113 (309)
..+.++|.+|+.-.... +. .+ .-++.+...+.+++.|+..++++.|-.|.
T Consensus 74 ~~~~~~~~~i~v~d~~~-----~~-s~----~~~~~~~~~l~~~~~~~~~iilv~nK~Dl 123 (170)
T 1z0j_A 74 MYYRGSAAAIIVYDITK-----EE-TF----STLKNWVRELRQHGPPSIVVAIAGNKCDL 123 (170)
T ss_dssp HHHTTCSEEEEEEETTC-----HH-HH----HHHHHHHHHHHHHSCTTSEEEEEEECTTC
T ss_pred hhCcCCCEEEEEEECcC-----HH-HH----HHHHHHHHHHHHhCCCCCcEEEEEECCcc
Confidence 34678888777654321 11 11 12244455556665567778888998886
No 114
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=25.61 E-value=1.9e+02 Score=24.86 Aligned_cols=57 Identities=11% Similarity=0.024 Sum_probs=38.6
Q ss_pred hhhhcCCCcEEEEeCCCCCCCCCCH-HHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecC
Q 021646 52 VVEACKDVNIAVMVGGFPRKEGMER-KDVMSKNVSIYKAQASALEKHAAPNCKVLVVAN 109 (309)
Q Consensus 52 ~~~~l~~aDiVVitag~~~~~~~sr-~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsn 109 (309)
..+.++++|+||-+|+.......+. .+.++.|..-...+...+.+.. +-..++.+|-
T Consensus 71 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~riV~~SS 128 (337)
T 2c29_D 71 FDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAK-TVRRLVFTSS 128 (337)
T ss_dssp THHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHS-CCCEEEEECC
T ss_pred HHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCC-CccEEEEeee
Confidence 3456889999999988542222232 3577889988888888888875 2345666653
No 115
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=25.50 E-value=1.7e+02 Score=25.59 Aligned_cols=41 Identities=17% Similarity=0.200 Sum_probs=26.0
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCC
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGG 67 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag 67 (309)
++.++|++ .+++ -.+... ++....+..+.+++||+||++..
T Consensus 56 ~V~~~dr~--~~~~----~~l~~~------g~~~~~~~~e~~~~aDvVi~~vp 96 (320)
T 4dll_A 56 ALQVWNRT--PARA----ASLAAL------GATIHEQARAAARDADIVVSMLE 96 (320)
T ss_dssp EEEEECSC--HHHH----HHHHTT------TCEEESSHHHHHTTCSEEEECCS
T ss_pred eEEEEcCC--HHHH----HHHHHC------CCEeeCCHHHHHhcCCEEEEECC
Confidence 57789986 2332 223221 24455566778899999999863
No 116
>2k2n_A Sensor protein, SYB-CPH1(GAF); phytochrome, GAF domain, phycocyanobilin, PCB, bacteriophytochrome, cyanobacterial phytochrome, kinase; HET: CYC; NMR {Synechococcus SP} SCOP: d.110.2.1 PDB: 2kli_A* 2koi_A*
Probab=25.03 E-value=1.5e+02 Score=22.64 Aligned_cols=28 Identities=11% Similarity=-0.018 Sum_probs=23.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 021646 281 KVDEFSRAKMDATAEELAEEKTLAYSCL 308 (309)
Q Consensus 281 ~L~~~E~~~l~~s~~~i~~~i~~~~~~~ 308 (309)
.++++|.+.|+..+..+--.++.+.-||
T Consensus 145 ~~~~~e~~~l~~la~~~a~ai~~a~L~~ 172 (172)
T 2k2n_A 145 PYSQEELQVVQLLADQVSIAIAQAELSL 172 (172)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 5899999999999999988888776553
No 117
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=24.90 E-value=91 Score=26.76 Aligned_cols=55 Identities=11% Similarity=0.166 Sum_probs=39.9
Q ss_pred CChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEec
Q 021646 50 TDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA 108 (309)
Q Consensus 50 ~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvs 108 (309)
....+.++++|+||-+|+..... +..+.+..|..-.+.++..+.+.+. . .++.+|
T Consensus 54 ~~~~~~~~~~d~Vih~a~~~~~~--~~~~~~~~n~~~~~~ll~a~~~~~~-~-r~v~~S 108 (311)
T 3m2p_A 54 EDLINQLNDVDAVVHLAATRGSQ--GKISEFHDNEILTQNLYDACYENNI-S-NIVYAS 108 (311)
T ss_dssp HHHHHHTTTCSEEEECCCCCCSS--SCGGGTHHHHHHHHHHHHHHHHTTC-C-EEEEEE
T ss_pred HHHHHhhcCCCEEEEccccCCCC--ChHHHHHHHHHHHHHHHHHHHHcCC-C-EEEEEc
Confidence 33456788999999999875433 4455678899999999999988763 4 355555
No 118
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=24.63 E-value=65 Score=28.46 Aligned_cols=51 Identities=12% Similarity=0.042 Sum_probs=31.7
Q ss_pred eeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCchh
Q 021646 46 VVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPAN 112 (309)
Q Consensus 46 ~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd 112 (309)
+....+..+.+++||+||++.- +. .++++...+..+..|+.+|+-++|.+.
T Consensus 72 ~~~~~~~~e~~~~aDvVilav~----~~------------~~~~vl~~l~~~l~~~~ivvs~s~gi~ 122 (322)
T 2izz_A 72 VKLTPHNKETVQHSDVLFLAVK----PH------------IIPFILDEIGADIEDRHIVVSCAAGVT 122 (322)
T ss_dssp CEEESCHHHHHHHCSEEEECSC----GG------------GHHHHHHHHGGGCCTTCEEEECCTTCC
T ss_pred CEEeCChHHHhccCCEEEEEeC----HH------------HHHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 3344456677889999999863 21 133344455555445777777777664
No 119
>2fu5_C RAS-related protein RAB-8A; MSS4:RAB8 protein complex, GEF:GTPase nucleotide free complex; 2.00A {Mus musculus} SCOP: c.37.1.8 PDB: 3qbt_A* 3tnf_A*
Probab=24.60 E-value=1.1e+02 Score=23.55 Aligned_cols=50 Identities=12% Similarity=0.217 Sum_probs=28.9
Q ss_pred hhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhH
Q 021646 54 EACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANT 113 (309)
Q Consensus 54 ~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~ 113 (309)
..+.++|++|+.-.... +.. + .-++.+...+.+++.++..++++.|-.|.
T Consensus 76 ~~~~~~d~~i~v~d~~~-----~~s-~----~~~~~~~~~i~~~~~~~~piilv~nK~Dl 125 (183)
T 2fu5_C 76 AYYRGAMGIMLVYDITN-----EKS-F----DNIRNWIRNIEEHASADVEKMILGNKCDV 125 (183)
T ss_dssp TTTTTCSEEEEEEETTC-----HHH-H----HHHHHHHHHHHHHSCTTCEEEEEEEC--C
T ss_pred HHHhcCCEEEEEEECcC-----HHH-H----HHHHHHHHHHHHhcCCCCCEEEEEECccC
Confidence 34678898888765432 221 2 22334555566665456778899999986
No 120
>3dz8_A RAS-related protein RAB-3B; GDP, GTPase, structural genomics consortium, SGC, cell GTP-binding, lipoprotein, membrane, methylation; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=24.50 E-value=95 Score=24.32 Aligned_cols=50 Identities=10% Similarity=0.154 Sum_probs=30.8
Q ss_pred hhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhH
Q 021646 54 EACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANT 113 (309)
Q Consensus 54 ~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~ 113 (309)
..+.++|++|+.-.... +.. + .-++.+...+.+++.++..++++.|-.|+
T Consensus 91 ~~~~~~d~~i~v~d~~~-----~~s-~----~~~~~~~~~i~~~~~~~~piilv~nK~Dl 140 (191)
T 3dz8_A 91 AYYRGAMGFILMYDITN-----EES-F----NAVQDWATQIKTYSWDNAQVILVGNKCDM 140 (191)
T ss_dssp HHHTTCCEEEEEEETTC-----HHH-H----HTHHHHHHHHHHHSCTTCEEEEEEECTTC
T ss_pred HHHccCCEEEEEEECcC-----HHH-H----HHHHHHHHHHHHhcCCCCCEEEEEECCCC
Confidence 45778898888754331 221 2 22334555566665456778888899886
No 121
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=24.27 E-value=1.4e+02 Score=25.31 Aligned_cols=44 Identities=11% Similarity=-0.058 Sum_probs=25.9
Q ss_pred hhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCc
Q 021646 52 VVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANP 110 (309)
Q Consensus 52 ~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnP 110 (309)
..+.+.++|+||++...+. .++.+...+.....|+.+++..+|.
T Consensus 49 ~~~~~~~~D~vi~~v~~~~---------------~~~~v~~~l~~~l~~~~~vv~~s~~ 92 (289)
T 2cvz_A 49 PLERVAEARVIFTCLPTTR---------------EVYEVAEALYPYLREGTYWVDATSG 92 (289)
T ss_dssp CGGGGGGCSEEEECCSSHH---------------HHHHHHHHHTTTCCTTEEEEECSCC
T ss_pred HHHHHhCCCEEEEeCCChH---------------HHHHHHHHHHhhCCCCCEEEECCCC
Confidence 4456789999999864221 1222334555544456667766764
No 122
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=24.02 E-value=1e+02 Score=17.29 Aligned_cols=23 Identities=17% Similarity=0.118 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 021646 284 EFSRAKMDATAEELAEEKTLAYS 306 (309)
Q Consensus 284 ~~E~~~l~~s~~~i~~~i~~~~~ 306 (309)
++|...|...++.+++.+++-++
T Consensus 5 ee~~r~l~~ivq~lq~r~drle~ 27 (32)
T 2akf_A 5 EEDVRNLNAIVQKLQERLDRLEE 27 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 56788899999999888887664
No 123
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=23.85 E-value=1.1e+02 Score=24.65 Aligned_cols=76 Identities=12% Similarity=0.045 Sum_probs=38.8
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASAL 94 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i 94 (309)
++.++|.+ .++++....++... .. ...+.. .+..+.++++|+||++... + .+ .++++ .+
T Consensus 26 ~V~~~~r~--~~~~~~~~~~~~~~-~~-~~~~~~-~~~~~~~~~~D~Vi~~~~~----~-----~~---~~~~~----~l 84 (212)
T 1jay_A 26 EIVVGSRR--EEKAEAKAAEYRRI-AG-DASITG-MKNEDAAEACDIAVLTIPW----E-----HA---IDTAR----DL 84 (212)
T ss_dssp EEEEEESS--HHHHHHHHHHHHHH-HS-SCCEEE-EEHHHHHHHCSEEEECSCH----H-----HH---HHHHH----HT
T ss_pred EEEEEeCC--HHHHHHHHHHhccc-cc-cCCCCh-hhHHHHHhcCCEEEEeCCh----h-----hH---HHHHH----HH
Confidence 57788986 33443322222110 00 012332 3455678899999998641 1 11 12333 33
Q ss_pred hhhcCCCcEEEEecCchh
Q 021646 95 EKHAAPNCKVLVVANPAN 112 (309)
Q Consensus 95 ~~~~~p~~~vivvsnPvd 112 (309)
..+. ++.+++.++|+++
T Consensus 85 ~~~~-~~~~vi~~~~g~~ 101 (212)
T 1jay_A 85 KNIL-REKIVVSPLVPVS 101 (212)
T ss_dssp HHHH-TTSEEEECCCCEE
T ss_pred HHHc-CCCEEEEcCCCcC
Confidence 3333 3668888888765
No 124
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=23.83 E-value=62 Score=29.03 Aligned_cols=42 Identities=7% Similarity=0.096 Sum_probs=24.9
Q ss_pred HHHHHHHHhhhcCCCcEEEEecCchhHHHHHHHHH--CCCCCCCcE
Q 021646 87 YKAQASALEKHAAPNCKVLVVANPANTNALILKEF--APSIPAKNI 130 (309)
Q Consensus 87 ~~~i~~~i~~~~~p~~~vivvsnPvd~~t~~~~~~--~~~~~~~~i 130 (309)
++++...+...++ +. +||-+-|.+++-.++.+. .=|+|++++
T Consensus 148 ~~~l~~~l~~~G~-~v-~ivSas~~~~v~~~a~~~~~~ygIp~e~V 191 (327)
T 4as2_A 148 QRELYNKLMENGI-EV-YVISAAHEELVRMVAADPRYGYNAKPENV 191 (327)
T ss_dssp HHHHHHHHHHTTC-EE-EEEEEEEHHHHHHHHTCGGGSCCCCGGGE
T ss_pred HHHHHHHHHHCCC-EE-EEEeCCcHHHHHHHHhhcccccCCCHHHe
Confidence 5666777777664 43 333344777777776652 116677774
No 125
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=23.63 E-value=1.2e+02 Score=26.70 Aligned_cols=50 Identities=8% Similarity=0.066 Sum_probs=39.2
Q ss_pred cCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEec
Q 021646 56 CKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA 108 (309)
Q Consensus 56 l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvs 108 (309)
..++|+||-+||.......+..+.+..|+.-...++..+.+.+ .. +|.+|
T Consensus 88 ~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~--~V~~S 137 (362)
T 3sxp_A 88 KLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKK-AK--VIYAS 137 (362)
T ss_dssp TSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTT-CE--EEEEE
T ss_pred ccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcC-Cc--EEEeC
Confidence 5799999999996544446778889999999999999998875 23 55555
No 126
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=23.62 E-value=69 Score=27.53 Aligned_cols=41 Identities=17% Similarity=0.246 Sum_probs=24.7
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCC
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGG 67 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag 67 (309)
++.++|.+ .++++. +... ++....+..+.++++|+||++..
T Consensus 30 ~V~~~~~~--~~~~~~----~~~~------g~~~~~~~~~~~~~~D~vi~~v~ 70 (299)
T 1vpd_A 30 SLVVSDRN--PEAIAD----VIAA------GAETASTAKAIAEQCDVIITMLP 70 (299)
T ss_dssp EEEEECSC--HHHHHH----HHHT------TCEECSSHHHHHHHCSEEEECCS
T ss_pred EEEEEeCC--HHHHHH----HHHC------CCeecCCHHHHHhCCCEEEEECC
Confidence 56789986 333322 2221 23344455566889999999874
No 127
>2kzs_A Death-associated protein 6; helical bundle,DHB domain, FAS death-domain associated prote rassf1C interacting domain, apoptosis; NMR {Homo sapiens} PDB: 2kzu_A
Probab=23.53 E-value=1e+02 Score=22.24 Aligned_cols=56 Identities=9% Similarity=0.071 Sum_probs=44.1
Q ss_pred HHHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhHHHHHHHHHCCCCCCCcEEEechhHHHHHHHHHHHHhC
Q 021646 79 VMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRAMGQISERLK 150 (309)
Q Consensus 79 ~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~~t~~~~~~~~~~~~~~ig~gt~lds~R~~~~la~~l~ 150 (309)
+..+|-+++.+++..+.... .+. | +++.++-.++. .- .-+.|+|.-|+..|++-|.
T Consensus 9 ~~~enekLfeEFv~~C~~~t-~d~-------P-eV~~fL~~r~~-ka------s~~fL~SveF~n~L~rcL~ 64 (94)
T 2kzs_A 9 YKLENEKLFEEFLELCKMQT-ADH-------P-EVVPFLYNRQQ-RA------HSLFLASAEFCNILSRVLS 64 (94)
T ss_dssp CHHHHHHHHHHHHHHHHHHC-TTC-------T-THHHHHHHHHH-TB------CHHHHTSHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHhcc-cCC-------c-HHHHHHHHHhc-cC------CchhhhHHHHHHHHHHHHH
Confidence 34579999999999999876 676 7 89999888874 32 3468999999999987654
No 128
>2w3g_A DOSS, two component sensor histidine kinase DEVS (GAF family protein); redox sensor, heme, hypoxia, GAF domain, transferase; HET: HEM; 1.40A {Mycobacterium tuberculosis} PDB: 2w3d_A* 2w3f_A* 2w3e_A* 2w3h_A* 2y79_A* 2y8h_A* 2vzw_A*
Probab=23.50 E-value=1.9e+02 Score=20.80 Aligned_cols=46 Identities=13% Similarity=0.097 Sum_probs=32.6
Q ss_pred ceEEEEeEEecC---CcEEEeC--C-CCCCHHHHHHHHHHHHHHHHHHHHHh
Q 021646 260 GLIYSFPVTCEK---GEWSIVK--G-LKVDEFSRAKMDATAEELAEEKTLAY 305 (309)
Q Consensus 260 ~v~~s~Pv~~~~---Gv~~i~~--~-~~L~~~E~~~l~~s~~~i~~~i~~~~ 305 (309)
..++++|+...+ |+-.+.. . -.+++++.+.|+..+..+--.++.+.
T Consensus 96 ~s~l~vPl~~~~~~~Gvl~l~~~~~~~~f~~~~~~~l~~la~~~a~ai~~a~ 147 (153)
T 2w3g_A 96 RTFLGVPVRVRDESFGTLYLTDKTNGQPFSDDDEVLVQALAAAAGIAVANAR 147 (153)
T ss_dssp CCEEEEEEEETTEEEEEEEEEEETTSCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEeeEEECCEEEEEEEEeeCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 468999987544 4443321 1 26999999999999988877776554
No 129
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A*
Probab=23.39 E-value=88 Score=27.70 Aligned_cols=51 Identities=16% Similarity=0.275 Sum_probs=32.8
Q ss_pred CCCcEEEEeCCCCC-CCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCch
Q 021646 57 KDVNIAVMVGGFPR-KEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPA 111 (309)
Q Consensus 57 ~~aDiVVitag~~~-~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPv 111 (309)
...|+|||..|..- ..+....+.+. .-++.++..+.+.. |++.|++++.|.
T Consensus 212 ~~PdlVvI~lGtND~~~~~~~~~~~~---~~l~~li~~ir~~~-p~a~Iil~~pp~ 263 (341)
T 2wao_A 212 YVPQVVVINLGTNDFSTSFADKTKFV---TAYKNLISEVRRNY-PDAHIFCCVGPM 263 (341)
T ss_dssp CCCSEEEEECCHHHHSSSCCCHHHHH---HHHHHHHHHHHHHC-TTCEEEEEECSS
T ss_pred CCCCEEEEeCccccCCCCCCCHHHHH---HHHHHHHHHHHHHC-CCCeEEEEeCCC
Confidence 47899999998531 01112223333 44677788888876 788888888654
No 130
>3e0y_A Conserved domain protein; APC87688.2, geobacter sulfurreducens PCA, structural genomics, PSI-2, midwest center for structural G MCSG; 3.10A {Geobacter sulfurreducens}
Probab=22.99 E-value=2e+02 Score=21.43 Aligned_cols=45 Identities=18% Similarity=0.111 Sum_probs=30.8
Q ss_pred ceEEEEeEEecC---CcEEEeC--CCCCCHHHHHHHHHHHHHHHHHHHHH
Q 021646 260 GLIYSFPVTCEK---GEWSIVK--GLKVDEFSRAKMDATAEELAEEKTLA 304 (309)
Q Consensus 260 ~v~~s~Pv~~~~---Gv~~i~~--~~~L~~~E~~~l~~s~~~i~~~i~~~ 304 (309)
..++++|+...+ |+-.+.. .-.+++++.+.|+..+..+--.++.+
T Consensus 118 ~s~l~vPl~~~~~~iGvl~~~~~~~~~f~~~~~~~l~~la~~~a~al~~~ 167 (181)
T 3e0y_A 118 NSMLSFPIGDKKEVYGVINLNTTSIRSFHEDEIYFVSIIANLILTAIKLR 167 (181)
T ss_dssp EEEEEEEEECSSCEEEEEEEEESSCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEeCCeEEEEEEEeeCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 468889987544 4333322 12689999999999888877766544
No 131
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=22.91 E-value=1.2e+02 Score=27.43 Aligned_cols=49 Identities=20% Similarity=0.114 Sum_probs=32.1
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCCC
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGF 68 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag~ 68 (309)
++.++|++ .++++..+-.+... ....+....+..+.+.+|||||++...
T Consensus 156 ~V~V~~r~--~~~a~~la~~~~~~---~g~~~~~~~~~~eav~~aDiVi~aTps 204 (350)
T 1x7d_A 156 EIVAYDTD--PLATAKLIANLKEY---SGLTIRRASSVAEAVKGVDIITTVTAD 204 (350)
T ss_dssp EEEEECSS--HHHHHHHHHHHTTC---TTCEEEECSSHHHHHTTCSEEEECCCC
T ss_pred EEEEEcCC--HHHHHHHHHHHHhc---cCceEEEeCCHHHHHhcCCEEEEeccC
Confidence 67899997 56666666555431 111244455667888999999997654
No 132
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=22.91 E-value=73 Score=25.44 Aligned_cols=49 Identities=18% Similarity=0.129 Sum_probs=36.5
Q ss_pred CcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecC
Q 021646 59 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVAN 109 (309)
Q Consensus 59 aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsn 109 (309)
+|+||.++|.......+..+.++.|......+++.+.+.+. . .++.+|.
T Consensus 66 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-~~v~~Ss 114 (215)
T 2a35_A 66 IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGA-R-HYLVVSA 114 (215)
T ss_dssp CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTC-C-EEEEECC
T ss_pred hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCC-C-EEEEECC
Confidence 89999999975433346777888999999999999888752 3 4566653
No 133
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=22.86 E-value=1.5e+02 Score=25.55 Aligned_cols=58 Identities=7% Similarity=0.050 Sum_probs=36.0
Q ss_pred hhhhcCCCcEEEEeCCCCCCCCCC-HHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCc
Q 021646 52 VVEACKDVNIAVMVGGFPRKEGME-RKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANP 110 (309)
Q Consensus 52 ~~~~l~~aDiVVitag~~~~~~~s-r~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnP 110 (309)
..+.++++|+||-+|+.......+ ..+.++.|..-...+...+.++. .-..+|.+|-.
T Consensus 74 ~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~v~r~V~~SS~ 132 (338)
T 2rh8_A 74 FEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAK-SVKRVILTSSA 132 (338)
T ss_dssp SHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCT-TCCEEEEECCH
T ss_pred HHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcC-CcCEEEEEecH
Confidence 345688999999999854211122 23477889988888888888763 12356766643
No 134
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=22.64 E-value=1e+02 Score=26.25 Aligned_cols=54 Identities=9% Similarity=0.145 Sum_probs=33.2
Q ss_pred cCCCcEEEEeCCCCCC--C--CCCH---HHHHHHhHH----HHHHHHHHHhhhcCCCcEEEEecC
Q 021646 56 CKDVNIAVMVGGFPRK--E--GMER---KDVMSKNVS----IYKAQASALEKHAAPNCKVLVVAN 109 (309)
Q Consensus 56 l~~aDiVVitag~~~~--~--~~sr---~~~~~~N~~----i~~~i~~~i~~~~~p~~~vivvsn 109 (309)
+...|++|-.||.... + +.+. .+.++.|.. +.+...+.+.+...+.+.|+.++.
T Consensus 100 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS 164 (272)
T 4dyv_A 100 FGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGS 164 (272)
T ss_dssp HSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECC
T ss_pred cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECc
Confidence 3489999999997532 1 2233 345556644 466777777765422567777764
No 135
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=22.38 E-value=61 Score=29.26 Aligned_cols=23 Identities=13% Similarity=0.284 Sum_probs=18.2
Q ss_pred cceeecCChhhhcCCCcEEEEeC
Q 021646 44 KGVVATTDVVEACKDVNIAVMVG 66 (309)
Q Consensus 44 ~~~~~~~~~~~~l~~aDiVVita 66 (309)
..+.+..+..+++++||||..+.
T Consensus 220 ~~v~~~~d~~eav~~aDvvytd~ 242 (328)
T 3grf_A 220 GSIKIFHDCKKGCEGVDVVYTDS 242 (328)
T ss_dssp CEEEEESSHHHHHTTCSEEEECC
T ss_pred CeEEEEcCHHHHhcCCCEEEecC
Confidence 35667778888999999988753
No 136
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus}
Probab=22.28 E-value=2.2e+02 Score=25.41 Aligned_cols=54 Identities=11% Similarity=0.166 Sum_probs=33.9
Q ss_pred CCCcEEEEeCCCC---C--CCCC---CHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCch
Q 021646 57 KDVNIAVMVGGFP---R--KEGM---ERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPA 111 (309)
Q Consensus 57 ~~aDiVVitag~~---~--~~~~---sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPv 111 (309)
.+.|+|||.-|.. + .++. ...+..+.-.+-++.++..+++.. |++.|++++.|.
T Consensus 235 ~~Pd~VvI~lGtND~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ir~~~-p~a~Iil~~pp~ 296 (366)
T 2w9x_A 235 WKPQVIVIGLGTNDFSTALNDNERWKTREALHADYVANYVKFVKQLHSNN-ARAQFILMNSDQ 296 (366)
T ss_dssp CCCSEEEEECCHHHHSSCCCTTSSCCSHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEESC
T ss_pred CCCCEEEEeCccCCCCCCCCCcccccccchHHHHHHHHHHHHHHHHHHHC-CCCeEEEEeCCC
Confidence 4789999998853 1 1221 122222333455778888888886 788888887443
No 137
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=22.21 E-value=2.8e+02 Score=23.11 Aligned_cols=53 Identities=13% Similarity=0.223 Sum_probs=32.9
Q ss_pred cCCCcEEEEeCCCCCCC---CCCH---HHHHHHhH----HHHHHHHHHHhhhcCCCcEEEEecC
Q 021646 56 CKDVNIAVMVGGFPRKE---GMER---KDVMSKNV----SIYKAQASALEKHAAPNCKVLVVAN 109 (309)
Q Consensus 56 l~~aDiVVitag~~~~~---~~sr---~~~~~~N~----~i~~~i~~~i~~~~~p~~~vivvsn 109 (309)
+...|++|-.||..... ..+. ...+..|. .+.+...+.+.+.. +.+.|+.+|-
T Consensus 96 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~g~iv~isS 158 (266)
T 4egf_A 96 FGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAG-EGGAIITVAS 158 (266)
T ss_dssp HTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCEEEEEECC
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEEcc
Confidence 34789999999975422 1233 33455564 45666677777664 3567777764
No 138
>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=22.21 E-value=1.8e+02 Score=21.67 Aligned_cols=51 Identities=12% Similarity=0.139 Sum_probs=29.8
Q ss_pred hhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhH
Q 021646 53 VEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANT 113 (309)
Q Consensus 53 ~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~ 113 (309)
...+.++|.+|+.-.... +. .+ .-++.+...+.++..++..++++.|-.|.
T Consensus 70 ~~~~~~~d~~i~v~d~~~-----~~-s~----~~~~~~~~~~~~~~~~~~piilv~nK~Dl 120 (170)
T 1ek0_A 70 PXYYRNAQAALVVYDVTK-----PQ-SF----IKARHWVKELHEQASKDIIIALVGNKIDX 120 (170)
T ss_dssp HHHHTTCSEEEEEEETTC-----HH-HH----HHHHHHHHHHHHHSCTTCEEEEEEECGGG
T ss_pred hhhhccCcEEEEEEecCC-----hH-HH----HHHHHHHHHHHHhcCCCCcEEEEEECCCc
Confidence 345678888888754321 11 11 12233444455554456678889999987
No 139
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=22.17 E-value=77 Score=25.67 Aligned_cols=51 Identities=20% Similarity=0.361 Sum_probs=34.6
Q ss_pred hhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEec
Q 021646 52 VVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA 108 (309)
Q Consensus 52 ~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvs 108 (309)
..+.++++|+||.++|... +..+.+..|....+.++..+.+.+ .. .++.+|
T Consensus 61 ~~~~~~~~d~vi~~a~~~~----~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~~S 111 (227)
T 3dhn_A 61 VCEVCKGADAVISAFNPGW----NNPDIYDETIKVYLTIIDGVKKAG-VN-RFLMVG 111 (227)
T ss_dssp HHHHHTTCSEEEECCCC----------CCSHHHHHHHHHHHHHHHTT-CS-EEEEEC
T ss_pred HHHHhcCCCEEEEeCcCCC----CChhHHHHHHHHHHHHHHHHHHhC-CC-EEEEeC
Confidence 3456889999999998642 122356778888999999998875 33 455555
No 140
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=22.16 E-value=2.6e+02 Score=23.31 Aligned_cols=51 Identities=14% Similarity=0.105 Sum_probs=31.6
Q ss_pred CCCcEEEEeCCCCCC--C--CCCH---HHHHHHhH----HHHHHHHHHHhhhcCCCcEEEEecC
Q 021646 57 KDVNIAVMVGGFPRK--E--GMER---KDVMSKNV----SIYKAQASALEKHAAPNCKVLVVAN 109 (309)
Q Consensus 57 ~~aDiVVitag~~~~--~--~~sr---~~~~~~N~----~i~~~i~~~i~~~~~p~~~vivvsn 109 (309)
...|++|-.||.... + ..+. ...+..|. ...+.+.+.+.+.. .+.|+.+|.
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~g~iv~isS 152 (267)
T 1iy8_A 91 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG--SGMVVNTAS 152 (267)
T ss_dssp SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CCEEEEECC
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CCEEEEEcc
Confidence 368999999997543 1 1232 34455664 45667777777654 456666664
No 141
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=21.97 E-value=1.2e+02 Score=24.06 Aligned_cols=48 Identities=19% Similarity=0.167 Sum_probs=29.9
Q ss_pred CcEEEEeCCCCCC---CCCCHHHHHHHhHHHHHHHHHHHhhhc------CCCcEEEEecCc
Q 021646 59 VNIAVMVGGFPRK---EGMERKDVMSKNVSIYKAQASALEKHA------APNCKVLVVANP 110 (309)
Q Consensus 59 aDiVVitag~~~~---~~~sr~~~~~~N~~i~~~i~~~i~~~~------~p~~~vivvsnP 110 (309)
.|+|||..|..-- .+.+. +.+. .-++.++..+++.+ .|++.|++++.|
T Consensus 84 ~d~vvi~~G~ND~~~~~~~~~-~~~~---~~l~~li~~~~~~~~~~~~~~P~~~iil~~~p 140 (216)
T 2q0q_A 84 LDLVIIMLGTNDTKAYFRRTP-LDIA---LGMSVLVTQVLTSAGGVGTTYPAPKVLVVSPP 140 (216)
T ss_dssp CSEEEEECCTGGGSGGGCCCH-HHHH---HHHHHHHHHHHTCTTTTTBCCCCCEEEEEECC
T ss_pred CCEEEEEecCcccchhcCCCH-HHHH---HHHHHHHHHHHHhcccccccCCCCeEEEEeCC
Confidence 5999999986431 13332 2233 34566777777764 157888888754
No 142
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=21.95 E-value=2.8e+02 Score=23.11 Aligned_cols=90 Identities=13% Similarity=0.140 Sum_probs=47.7
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChh-----------hhcCCCcEEEEeCCCCCCC---CCCHHH--
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVV-----------EACKDVNIAVMVGGFPRKE---GMERKD-- 78 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~-----------~~l~~aDiVVitag~~~~~---~~sr~~-- 78 (309)
.++++|.+ .+.++..+.++..........+...-.++ +.+...|++|-.||..... ..+..+
T Consensus 36 ~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~ 113 (262)
T 3pk0_A 36 NVAVAGRS--TADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLN 113 (262)
T ss_dssp EEEEEESC--HHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHH
T ss_pred EEEEEeCC--HHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHH
Confidence 57788986 45666666677643211111111111111 1233799999999975321 234333
Q ss_pred -HHHHhH----HHHHHHHHHHhhhcCCCcEEEEec
Q 021646 79 -VMSKNV----SIYKAQASALEKHAAPNCKVLVVA 108 (309)
Q Consensus 79 -~~~~N~----~i~~~i~~~i~~~~~p~~~vivvs 108 (309)
.++.|. .+.+...+.+.+.. .+.+++++
T Consensus 114 ~~~~~N~~g~~~~~~~~~~~m~~~~--~g~iv~is 146 (262)
T 3pk0_A 114 GIFAVNVNGTFYAVQACLDALIASG--SGRVVLTS 146 (262)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHS--SCEEEEEC
T ss_pred HHHHHhhHHHHHHHHHHHHHHHhcC--CcEEEEEe
Confidence 355564 34566666666654 45566655
No 143
>3n4h_A Putative tautomerase; CG10062, CIS-3-chloroacrylic acid dehalogenase, tautomerase superfamily, beta-alpha-beta motif, hydrolase; HET: PR7; 2.02A {Corynebacterium glutamicum} PDB: 3n4d_A* 3n4g_A
Probab=21.90 E-value=93 Score=24.04 Aligned_cols=55 Identities=15% Similarity=0.218 Sum_probs=24.9
Q ss_pred HHHHHHHHHHhCCCCCCeeeeEEEeecCCceeeecCCceeecCCCCcchhhhhcccccchhHHHHHHH
Q 021646 139 NRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQ 206 (309)
Q Consensus 139 ~R~~~~la~~l~v~~~~v~~~vV~GehG~s~vp~~S~~~v~~~~~~~pl~~~~~~~~~~~~el~~~v~ 206 (309)
.++...+++.+++++.++. + ++-++... .|+. +|..+.+.-++..|.+ ++....|
T Consensus 83 ~~l~~~l~~~lgi~~~~v~-V-~i~E~~~~---~wg~-------gG~~~~~~g~e~~W~~-~~~~~~~ 137 (148)
T 3n4h_A 83 LRLTQEIALILGIPNEEVW-V-YITEIPGS---NMTE-------YGRLLMEPGEEEKWFN-SLPEGLR 137 (148)
T ss_dssp HHHHHHHHHHHTCCGGGEE-E-EEEEECGG---GCCC-------SSCC--------------------
T ss_pred HHHHHHHHHHhCcCcCcEE-E-EEEEcCHH---HeeE-------CCEECCCCcchHHHHH-hCcHHHH
Confidence 4567778889999999986 4 46775421 3443 7777776655567853 4555443
No 144
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=21.78 E-value=2.9e+02 Score=22.62 Aligned_cols=91 Identities=15% Similarity=0.143 Sum_probs=49.1
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeecCC-----------hhhhcCCCcEEEEeCCCCC---C---CCCCH-
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTD-----------VVEACKDVNIAVMVGGFPR---K---EGMER- 76 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~-----------~~~~l~~aDiVVitag~~~---~---~~~sr- 76 (309)
.++++|.+ .+.+....-++...... ...+...-. ..+.+...|++|-.||... . ...+.
T Consensus 35 ~V~~~~r~--~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~ 111 (253)
T 3qiv_A 35 AVVVADIN--AEAAEAVAKQIVADGGT-AISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPE 111 (253)
T ss_dssp EEEEEESC--HHHHHHHHHHHHHTTCE-EEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHH
T ss_pred EEEEEcCC--HHHHHHHHHHHHhcCCc-EEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHH
Confidence 47788986 45555555555432210 001111111 1122347899999999731 1 12233
Q ss_pred --HHHHHHhHHH----HHHHHHHHhhhcCCCcEEEEecCc
Q 021646 77 --KDVMSKNVSI----YKAQASALEKHAAPNCKVLVVANP 110 (309)
Q Consensus 77 --~~~~~~N~~i----~~~i~~~i~~~~~p~~~vivvsnP 110 (309)
.+.++.|..- .+.+.+.+.+.. .+.|+.+|..
T Consensus 112 ~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~g~iv~isS~ 149 (253)
T 3qiv_A 112 YYKKFMSVNLDGALWCTRAVYKKMTKRG--GGAIVNQSST 149 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT--CEEEEEECC-
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhcC--CCEEEEECCc
Confidence 3456666554 777788887764 5667777743
No 145
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=21.62 E-value=1.1e+02 Score=26.95 Aligned_cols=54 Identities=15% Similarity=0.147 Sum_probs=39.1
Q ss_pred hhhcCCCcEEEEeCCCCCCC--CCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEec
Q 021646 53 VEACKDVNIAVMVGGFPRKE--GMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA 108 (309)
Q Consensus 53 ~~~l~~aDiVVitag~~~~~--~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvs 108 (309)
.+.+++.|+||-+|+....+ ..+..+.++.|..-...++..+.+++ .. .++.+|
T Consensus 86 ~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~-v~-~~V~~S 141 (344)
T 2gn4_A 86 NYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNA-IS-QVIALS 141 (344)
T ss_dssp HHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CS-EEEEEC
T ss_pred HHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC-CC-EEEEec
Confidence 45678999999999865321 12456788899999999999988875 23 455555
No 146
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B*
Probab=21.59 E-value=1.4e+02 Score=22.80 Aligned_cols=50 Identities=14% Similarity=0.183 Sum_probs=29.6
Q ss_pred hhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhH
Q 021646 54 EACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANT 113 (309)
Q Consensus 54 ~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~ 113 (309)
..++++|++|+.-... ++.. + .-++.+...+.+++.|+..++++.|-.|.
T Consensus 80 ~~~~~~d~~i~v~d~~-----~~~s-~----~~~~~~~~~~~~~~~~~~p~i~v~nK~Dl 129 (181)
T 2efe_B 80 MYYRGAAAAIIVFDVT-----NQAS-F----ERAKKWVQELQAQGNPNMVMALAGNKSDL 129 (181)
T ss_dssp HHHTTCSEEEEEEETT-----CHHH-H----HHHHHHHHHHHHHSCTTCEEEEEEECTTC
T ss_pred HHhccCCEEEEEEECC-----CHHH-H----HHHHHHHHHHHHhcCCCCcEEEEEECCcc
Confidence 3467888888875432 1111 1 22334445555555457778888888886
No 147
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=21.55 E-value=75 Score=31.81 Aligned_cols=45 Identities=16% Similarity=0.177 Sum_probs=29.3
Q ss_pred eeecCChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEE
Q 021646 46 VVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVL 105 (309)
Q Consensus 46 ~~~~~~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vi 105 (309)
++..++ ++++++||+||.+.- .+..+.+.+...+.+++.|+++++
T Consensus 382 i~~~~d-~~~~~~aDlVIeaV~--------------e~~~vk~~v~~~l~~~~~~~~Ila 426 (715)
T 1wdk_A 382 IRPTLS-YGDFGNVDLVVEAVV--------------ENPKVKQAVLAEVENHVREDAILA 426 (715)
T ss_dssp EEEESS-STTGGGCSEEEECCC--------------SCHHHHHHHHHHHHTTSCTTCEEE
T ss_pred eEEECC-HHHHCCCCEEEEcCC--------------CCHHHHHHHHHHHHhhCCCCeEEE
Confidence 455544 478999999999862 123344555566778876677544
No 148
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=21.36 E-value=41 Score=29.50 Aligned_cols=75 Identities=12% Similarity=0.117 Sum_probs=45.7
Q ss_pred hhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCc-EEEEecCchhHHHHHHHHHCCCCCCCcE
Q 021646 52 VVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNC-KVLVVANPANTNALILKEFAPSIPAKNI 130 (309)
Q Consensus 52 ~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~-~vivvsnPvd~~t~~~~~~~~~~~~~~i 130 (309)
.+..+..||+|+||+.. ++..-.+.+-+.+ +++ .+++++ |--.|.+.+. ++.-..+
T Consensus 180 ~e~ll~~aD~viiTGsT-----------------lvN~Ti~~lL~~~-~~a~~vvl~G-PS~p~~P~lf----~~Gv~~l 236 (270)
T 2h1q_A 180 SEFILPECDYVYITCAS-----------------VVDKTLPRLLELS-RNARRITLVG-PGTPLAPVLF----EHGLQEL 236 (270)
T ss_dssp HHHHGGGCSEEEEETHH-----------------HHHTCHHHHHHHT-TTSSEEEEES-TTCCCCGGGG----GTTCSEE
T ss_pred HHHHhhcCCEEEEEeee-----------------eecCCHHHHHHhC-ccCCeEEEEe-cChhhhHHHH----hcCcCEE
Confidence 44468999999999742 2222233344455 355 566665 6555555432 2344557
Q ss_pred EEechhHHHHHHHHHHHHh
Q 021646 131 TCLTRLDHNRAMGQISERL 149 (309)
Q Consensus 131 g~gt~lds~R~~~~la~~l 149 (309)
++....|..++...+++--
T Consensus 237 ~G~~V~D~~~~~~~i~~Gg 255 (270)
T 2h1q_A 237 SGFMVKDNARAFRIVAGAE 255 (270)
T ss_dssp EEEEESCHHHHHHHHTTSS
T ss_pred EEeEecCHHHHHHHHHcCC
Confidence 6666789999888886543
No 149
>2gf9_A RAS-related protein RAB-3D; G-protein, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.53A {Homo sapiens} PDB: 3rab_A*
Probab=21.08 E-value=1.4e+02 Score=23.12 Aligned_cols=51 Identities=10% Similarity=0.138 Sum_probs=30.7
Q ss_pred hhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhH
Q 021646 53 VEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANT 113 (309)
Q Consensus 53 ~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~ 113 (309)
...+.++|++|+.-.... +. -+ .-++.+...+.+++.++..++++.|-.|.
T Consensus 89 ~~~~~~~d~ii~v~d~~~-----~~-s~----~~~~~~~~~i~~~~~~~~piilv~nK~Dl 139 (189)
T 2gf9_A 89 TAYYRGAMGFLLMYDIAN-----QE-SF----AAVQDWATQIKTYSWDNAQVILVGNKCDL 139 (189)
T ss_dssp GGGGTTCSEEEEEEETTC-----HH-HH----HTHHHHHHHHHHHSCTTCEEEEEEECTTC
T ss_pred HHhccCCCEEEEEEECCC-----HH-HH----HHHHHHHHHHHHhcCCCCCEEEEEECccc
Confidence 445678888888754321 21 12 12234455566665456678889999987
No 150
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=20.87 E-value=1.7e+02 Score=27.57 Aligned_cols=56 Identities=11% Similarity=0.131 Sum_probs=37.5
Q ss_pred hhhhcCCCcEEEEeCCCCCC---CCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEec
Q 021646 52 VVEACKDVNIAVMVGGFPRK---EGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA 108 (309)
Q Consensus 52 ~~~~l~~aDiVVitag~~~~---~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvs 108 (309)
..+.+.++|+||-+|+.... ......+.+..|..-.+.++..+.+... -..+|.+|
T Consensus 195 ~~~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~-~~r~V~~S 253 (516)
T 3oh8_A 195 ASDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQ-CTTMISAS 253 (516)
T ss_dssp CTTTTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSS-CCEEEEEE
T ss_pred hHHhcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeC
Confidence 35667899999999986532 2234567788899999999998555432 23455555
No 151
>2bcg_Y Protein YP2, GTP-binding protein YPT1; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ukv_Y* 3cue_F* 1yzn_A* 3sfv_A* 2wwx_A 2fol_A* 3nkv_A* 3jza_A* 2rhd_A*
Probab=20.76 E-value=1.7e+02 Score=22.99 Aligned_cols=50 Identities=12% Similarity=0.132 Sum_probs=30.4
Q ss_pred hhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhH
Q 021646 54 EACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANT 113 (309)
Q Consensus 54 ~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~ 113 (309)
..+.++|++|+.-.... +.. + .-++.+...+.++..++..++++.|-.|.
T Consensus 76 ~~~~~~d~vilv~d~~~-----~~s-~----~~~~~~~~~i~~~~~~~~piilv~nK~Dl 125 (206)
T 2bcg_Y 76 SYYRGSHGIIIVYDVTD-----QES-F----NGVKMWLQEIDRYATSTVLKLLVGNKCDL 125 (206)
T ss_dssp GGGTTCSEEEEEEETTC-----HHH-H----HHHHHHHHHHHHHSCTTCEEEEEEECTTC
T ss_pred HhccCCCEEEEEEECcC-----HHH-H----HHHHHHHHHHHHhcCCCCCEEEEEECCCC
Confidence 44678898888754331 111 1 22334555566665456678889999986
No 152
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=20.69 E-value=1.2e+02 Score=26.43 Aligned_cols=41 Identities=10% Similarity=0.152 Sum_probs=25.8
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCCCcEEEEeCC
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGG 67 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~aDiVVitag 67 (309)
++.++|++ .+++.. +... +....++..+.+++||+||++..
T Consensus 46 ~V~~~dr~--~~~~~~----l~~~------g~~~~~~~~~~~~~aDvvi~~vp 86 (310)
T 3doj_A 46 KVTVWNRT--LSKCDE----LVEH------GASVCESPAEVIKKCKYTIAMLS 86 (310)
T ss_dssp EEEEECSS--GGGGHH----HHHT------TCEECSSHHHHHHHCSEEEECCS
T ss_pred eEEEEeCC--HHHHHH----HHHC------CCeEcCCHHHHHHhCCEEEEEcC
Confidence 57789997 334432 2211 23445566777899999999863
No 153
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=20.58 E-value=4e+02 Score=24.88 Aligned_cols=74 Identities=15% Similarity=0.104 Sum_probs=40.1
Q ss_pred EEEEEecCCccchhhHHHHHHhhccCCCCcceeecCChhhhcCC---CcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHH
Q 021646 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKD---VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQA 91 (309)
Q Consensus 15 ~l~L~D~~~~~~~~~g~~~DL~~~~~~~~~~~~~~~~~~~~l~~---aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~ 91 (309)
++.++|++ .+++.. +.... . ..++....+..+.+++ +|+||++.-. +.. +++++
T Consensus 40 ~V~v~~r~--~~~~~~----l~~~~-~-~~gi~~~~s~~e~v~~l~~aDvVil~Vp~----~~~-----------v~~vl 96 (480)
T 2zyd_A 40 TVSIFNRS--REKTEE----VIAEN-P-GKKLVPYYTVKEFVESLETPRRILLMVKA----GAG-----------TDAAI 96 (480)
T ss_dssp CEEEECSS--HHHHHH----HHHHS-T-TSCEEECSSHHHHHHTBCSSCEEEECSCS----SSH-----------HHHHH
T ss_pred eEEEEeCC--HHHHHH----HHhhC-C-CCCeEEeCCHHHHHhCCCCCCEEEEECCC----HHH-----------HHHHH
Confidence 46789986 333332 22210 0 1245555555555555 9999998632 111 23333
Q ss_pred HHHhhhcCCCcEEEEecCch
Q 021646 92 SALEKHAAPNCKVLVVANPA 111 (309)
Q Consensus 92 ~~i~~~~~p~~~vivvsnPv 111 (309)
..+..+..|+.+||-++|-.
T Consensus 97 ~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 97 DSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HHHGGGCCTTCEEEECSCCC
T ss_pred HHHHhhcCCCCEEEECCCCC
Confidence 45556554567777788754
No 154
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=20.54 E-value=1.7e+02 Score=25.01 Aligned_cols=53 Identities=6% Similarity=0.117 Sum_probs=32.5
Q ss_pred CCCcEEEEeCCCCCCC----CCCH---HHHHHHhHH----HHHHHHHHHhhhcCCCcEEEEecC
Q 021646 57 KDVNIAVMVGGFPRKE----GMER---KDVMSKNVS----IYKAQASALEKHAAPNCKVLVVAN 109 (309)
Q Consensus 57 ~~aDiVVitag~~~~~----~~sr---~~~~~~N~~----i~~~i~~~i~~~~~p~~~vivvsn 109 (309)
..-|++|-.||..... +.+. ...+..|.. +.+.+.+.+.+...+.+.|+.+|.
T Consensus 110 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS 173 (281)
T 4dry_A 110 ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGS 173 (281)
T ss_dssp SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECC
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECC
Confidence 4679999999975321 1333 335555643 466677777765423567777764
No 155
>4dkx_A RAS-related protein RAB-6A; GTP binding fold, membrane trafficking, GTP, cytosol, protei transport; HET: GDP; 1.90A {Homo sapiens} PDB: 3bbp_A*
Probab=20.54 E-value=1e+02 Score=25.52 Aligned_cols=49 Identities=12% Similarity=0.173 Sum_probs=29.9
Q ss_pred hcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhH
Q 021646 55 ACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANT 113 (309)
Q Consensus 55 ~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~ 113 (309)
.+.++|.+++.-... ++. -+. | ++.+...+..+..++..+++++|-.|+
T Consensus 82 ~~~~a~~~ilv~di~-----~~~-Sf~-~---i~~~~~~i~~~~~~~~piilVgNK~Dl 130 (216)
T 4dkx_A 82 YIRDSAAAVVVYDIT-----NVN-SFQ-Q---TTKWIDDVRTERGSDVIIMLVGNKTDL 130 (216)
T ss_dssp HHTTCSEEEEEEETT-----CHH-HHH-T---HHHHHHHHHHHHTTSSEEEEEEECTTC
T ss_pred HhccccEEEEEeecc-----hhH-HHH-H---HHHHHHHHHHhcCCCCeEEEEeeccch
Confidence 356888888876543 222 222 2 234444555554468889999999985
No 156
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=20.48 E-value=81 Score=25.82 Aligned_cols=54 Identities=7% Similarity=0.012 Sum_probs=37.1
Q ss_pred hhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEec
Q 021646 52 VVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA 108 (309)
Q Consensus 52 ~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvs 108 (309)
..+.+++.|+||.++|.... .....+.+..|..-...+++.+.+.+ ...++.+|
T Consensus 78 ~~~~~~~~d~vi~~ag~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~iv~~S 131 (242)
T 2bka_A 78 YASAFQGHDVGFCCLGTTRG-KAGAEGFVRVDRDYVLKSAELAKAGG--CKHFNLLS 131 (242)
T ss_dssp GGGGGSSCSEEEECCCCCHH-HHHHHHHHHHHTHHHHHHHHHHHHTT--CCEEEEEC
T ss_pred HHHHhcCCCEEEECCCcccc-cCCcccceeeeHHHHHHHHHHHHHCC--CCEEEEEc
Confidence 34567789999999996431 12345677788888888888887764 23556555
No 157
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=20.37 E-value=2.2e+02 Score=25.13 Aligned_cols=54 Identities=9% Similarity=0.023 Sum_probs=39.4
Q ss_pred hhhcCCCcEEEEeCCCCCCC---CCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEec
Q 021646 53 VEACKDVNIAVMVGGFPRKE---GMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVA 108 (309)
Q Consensus 53 ~~~l~~aDiVVitag~~~~~---~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvs 108 (309)
.+.++++|+||-+|+..... ..+..+.+..|..-...++..+.+.+ .. .++.+|
T Consensus 88 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~-~~V~~S 144 (379)
T 2c5a_A 88 LKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IK-RFFYAS 144 (379)
T ss_dssp HHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CS-EEEEEE
T ss_pred HHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcC-CC-EEEEEe
Confidence 45578999999999865321 34567788899999999999988865 23 455555
No 158
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=20.30 E-value=41 Score=29.95 Aligned_cols=45 Identities=16% Similarity=0.205 Sum_probs=30.5
Q ss_pred hhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCchh
Q 021646 52 VVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPAN 112 (309)
Q Consensus 52 ~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd 112 (309)
+.+++.++|+||++.-.+ .++++.+.+..+-.|+.+|+.+.|.++
T Consensus 64 ~~~~~~~~D~Vilavk~~----------------~~~~~~~~l~~~l~~~~~iv~~~nGi~ 108 (335)
T 3ghy_A 64 DAAALGEQDVVIVAVKAP----------------ALESVAAGIAPLIGPGTCVVVAMNGVP 108 (335)
T ss_dssp CHHHHCCCSEEEECCCHH----------------HHHHHHGGGSSSCCTTCEEEECCSSSC
T ss_pred CHHHcCCCCEEEEeCCch----------------hHHHHHHHHHhhCCCCCEEEEECCCCc
Confidence 445579999999986311 134455566666556888888999853
No 159
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=20.29 E-value=45 Score=29.29 Aligned_cols=75 Identities=15% Similarity=0.174 Sum_probs=46.4
Q ss_pred ChhhhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCc-EEEEecCchhHHHHHHHHHCCCCCCCc
Q 021646 51 DVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNC-KVLVVANPANTNALILKEFAPSIPAKN 129 (309)
Q Consensus 51 ~~~~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~-~vivvsnPvd~~t~~~~~~~~~~~~~~ 129 (309)
..+..+..||+|+||+. .++..-.+.+-+.+ +++ .+++++ |--.|.+.+.++ .-..
T Consensus 179 ~~~~~lp~~D~viiTgs-----------------tlvN~Tl~~lL~~~-~~a~~vvl~G-PStp~~P~lf~~----Gv~~ 235 (270)
T 3l5o_A 179 ASEFILPECDYVYITCA-----------------SVVDKTLPRLLELS-RNARRITLVG-PGTPLAPVLFEH----GLQE 235 (270)
T ss_dssp GHHHHGGGCSEEEEETH-----------------HHHHTCHHHHHHHT-TTSSEEEEES-TTCCCCGGGGGT----TCSE
T ss_pred HHHHhhccCCEEEEEee-----------------hhhcCCHHHHHhhC-CCCCEEEEEC-CCchhhHHHHhc----CcCE
Confidence 44557899999999974 22223344445555 344 566666 665555543332 2455
Q ss_pred EEEechhHHHHHHHHHHHH
Q 021646 130 ITCLTRLDHNRAMGQISER 148 (309)
Q Consensus 130 ig~gt~lds~R~~~~la~~ 148 (309)
+++....|..++...+++-
T Consensus 236 laG~~V~d~~~~~~~i~~G 254 (270)
T 3l5o_A 236 LSGFMVKDNARAFRIVAGA 254 (270)
T ss_dssp EEEEEESCHHHHHHHHTTS
T ss_pred EEEEEEcCHHHHHHHHhcC
Confidence 6666678999988888643
No 160
>2ew1_A RAS-related protein RAB-30; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=20.24 E-value=1.7e+02 Score=23.33 Aligned_cols=50 Identities=10% Similarity=0.129 Sum_probs=28.0
Q ss_pred hhcCCCcEEEEeCCCCCCCCCCHHHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCchhH
Q 021646 54 EACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANT 113 (309)
Q Consensus 54 ~~l~~aDiVVitag~~~~~~~sr~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPvd~ 113 (309)
..+.++|++|+.-.... +.. +. -++.+...+.+++.++..++++.|-.|.
T Consensus 94 ~~~~~~d~~i~v~D~~~-----~~s-~~----~~~~~~~~i~~~~~~~~piilv~NK~Dl 143 (201)
T 2ew1_A 94 SYYRSANALILTYDITC-----EES-FR----CLPEWLREIEQYASNKVITVLVGNKIDL 143 (201)
T ss_dssp GGSTTCSEEEEEEETTC-----HHH-HH----THHHHHHHHHHHSCTTCEEEEEEECGGG
T ss_pred HHHhcCCEEEEEEECCC-----HHH-HH----HHHHHHHHHHHhcCCCCCEEEEEECCCC
Confidence 34678888888754321 111 11 1233444455554345667888888886
No 161
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=20.21 E-value=79 Score=25.74 Aligned_cols=51 Identities=14% Similarity=0.207 Sum_probs=31.0
Q ss_pred CCCcEEEEeCCCC-----CCCCCCH---HHHHHHhHHHHHHHHHHHhhhcCCCcEEEEecCch
Q 021646 57 KDVNIAVMVGGFP-----RKEGMER---KDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPA 111 (309)
Q Consensus 57 ~~aDiVVitag~~-----~~~~~sr---~~~~~~N~~i~~~i~~~i~~~~~p~~~vivvsnPv 111 (309)
.+.|+|+|..|.. ..+++.+ .+.+. .-++.++..+.+.. |++.|++++.|.
T Consensus 81 ~~pd~Vii~~G~ND~~~~~~~~~~~~~~~~~f~---~~l~~li~~l~~~~-P~~~iil~~p~~ 139 (232)
T 3dc7_A 81 EDADFIAVFGGVNDYGRDQPLGQYGDCDMTTFY---GALMMLLTGLQTNW-PTVPKLFISAIH 139 (232)
T ss_dssp TTCSEEEEECCHHHHHTTCCCCCTTCCSTTSHH---HHHHHHHHHHHHHC-TTSCEEEEECCC
T ss_pred CCCCEEEEEEeccccccCcCCccccccchHHHH---HHHHHHHHHHHHhC-CCCeEEEEeCcc
Confidence 4789999998842 1111111 11222 24666777788775 788888887543
No 162
>3uan_A Heparan sulfate glucosamine 3-O-sulfotransferase; alpha/beta motif, CO-FACT PAPS/PAP, heparan sulfate oligosaccharides, golgi-localized transferase; HET: A3P NGY BDP SGN IDS; 1.84A {Mus musculus} PDB: 1vkj_A* 1zrh_A*
Probab=20.17 E-value=97 Score=26.81 Aligned_cols=29 Identities=10% Similarity=0.251 Sum_probs=20.8
Q ss_pred HHHHHhhhcCCCcEEEEec-CchhHHHHHHH
Q 021646 90 QASALEKHAAPNCKVLVVA-NPANTNALILK 119 (309)
Q Consensus 90 i~~~i~~~~~p~~~vivvs-nPvd~~t~~~~ 119 (309)
....|.+.. |++++|++. ||+|.......
T Consensus 91 ~~~~i~~~~-P~aKiI~vlRnPvDra~S~y~ 120 (269)
T 3uan_A 91 VPERIHSMN-PTIRLLLILRDPSERVLSDYT 120 (269)
T ss_dssp HHHHHHHHC-TTCEEEEEECCHHHHHHHHHH
T ss_pred HHHHHHHhC-CCCcEEEEEcCHHHHHHHHHH
Confidence 456677775 899876666 99998765443
No 163
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=20.08 E-value=3.5e+02 Score=21.88 Aligned_cols=50 Identities=16% Similarity=0.182 Sum_probs=30.0
Q ss_pred CCcEEEEeCCCCCCCC------CCH---HHHHHHhHH----HHHHHHHHHhhhcCCCcEEEEecC
Q 021646 58 DVNIAVMVGGFPRKEG------MER---KDVMSKNVS----IYKAQASALEKHAAPNCKVLVVAN 109 (309)
Q Consensus 58 ~aDiVVitag~~~~~~------~sr---~~~~~~N~~----i~~~i~~~i~~~~~p~~~vivvsn 109 (309)
+.|+||-.||...... .+. ...+..|.. +.+.+.+.+.+.. .+.++.+|.
T Consensus 80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~isS 142 (250)
T 2cfc_A 80 AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG--AGVIVNIAS 142 (250)
T ss_dssp CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECC
T ss_pred CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC--CCEEEEECC
Confidence 7899999999753211 122 334555643 4466666666653 456776664
Done!