RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 021646
(309 letters)
>d7mdha2 d.162.1.1 (A:198-385) Malate dehydrogenase {Sorghum
(Sorghum vulgare), chloroplast [TaxId: 4558]}
Length = 188
Score = 185 bits (470), Expect = 6e-59
Identities = 68/170 (40%), Positives = 96/170 (56%), Gaps = 6/170 (3%)
Query: 134 TRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVAD 193
TRLD NRA Q++ + V V NV IWGNHS+TQ PD +A + +PV+E +
Sbjct: 1 TRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIDG----RPVKEVIKR 56
Query: 194 DNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDG 253
WL EF TVQ+RG A+I+ SSA S A S D I+ V TP+G W S GVY+ G
Sbjct: 57 TKWLEEEFTITVQKRGGALIQKWGRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTTG 116
Query: 254 S-YGIPEGLIYSFPVTCEK-GEWSIVKGLKVDEFSRAKMDATAEELAEEK 301
+ YGI E +++S P + G++ + + D+F ++ + EL EK
Sbjct: 117 NPYGIAEDIVFSMPCRSKGDGDYELATDVSNDDFLWERIKKSEAELLAEK 166
>d5mdha2 d.162.1.1 (A:155-333) Malate dehydrogenase {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 179
Score = 180 bits (458), Expect = 2e-57
Identities = 116/177 (65%), Positives = 137/177 (77%), Gaps = 1/177 (0%)
Query: 134 TRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVAD 193
TRLDHNRA QI+ +L V DVKNVIIWGNHSSTQYPDVNHA V E V EAV D
Sbjct: 1 TRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKD 60
Query: 194 DNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDG 253
D+WL EFITTVQQRGAA+IKARKLSSA+SAA + CDH+RD GTP+G +VSMG+ SDG
Sbjct: 61 DSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDG 120
Query: 254 -SYGIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAYSCLN 309
SYG+P+ L+YSFPVT + W IV+GL +++FSR KMD TA+ELAEEK A+ L+
Sbjct: 121 NSYGVPDDLLYSFPVTIKDKTWKIVEGLPINDFSREKMDLTAKELAEEKETAFEFLS 177
>d1y7ta2 d.162.1.1 (A:154-332) Malate dehydrogenase {Thermus
thermophilus [TaxId: 274]}
Length = 173
Score = 163 bits (412), Expect = 2e-50
Identities = 86/169 (50%), Positives = 118/169 (69%), Gaps = 5/169 (2%)
Query: 133 LTRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVA 192
+TRLDHNRA Q++++ V ++ + +WGNHSST +PD+ HA V + +
Sbjct: 1 MTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDGRPALE-----LV 55
Query: 193 DDNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSD 252
D W FI TV QRGAAII+AR SSA SAA++A +HIRDW LGTP+G WVSM V S
Sbjct: 56 DMEWYEKVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQ 115
Query: 253 GSYGIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAEEK 301
G YGIPEG++YSFPVT + G + +V+GL+++EF+R +M+ TA+EL +E
Sbjct: 116 GEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDEM 164
>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum
vulgare), chloroplast [TaxId: 4558]}
Length = 175
Score = 148 bits (374), Expect = 1e-44
Identities = 61/133 (45%), Positives = 80/133 (60%)
Query: 1 MIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 60
+A G + G DQP+ L +L E + +AL GV MEL D+ +PLL+ V D E +DV+
Sbjct: 43 KLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVD 102
Query: 61 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKE 120
A+++G PR GMER ++ N I+ Q AL A+ N KVLVV NP NTNALI +
Sbjct: 103 WALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALICLK 162
Query: 121 FAPSIPAKNITCL 133
AP IPAKN L
Sbjct: 163 NAPDIPAKNFHAL 175
>d1b8pa2 d.162.1.1 (A:159-329) Malate dehydrogenase {Aquaspirillum
arcticum [TaxId: 87645]}
Length = 171
Score = 138 bits (348), Expect = 6e-41
Identities = 84/167 (50%), Positives = 113/167 (67%), Gaps = 5/167 (2%)
Query: 135 RLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADD 194
RLDHNRA+ QI+ + VS ++ + +WGNHS T Y D +A + V++ + DD
Sbjct: 2 RLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYAQI----DGASVKDMINDD 57
Query: 195 NWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGS 254
W F+ TV +RGAAII AR +SSA SAA++A DHI DWVLGT W +MG+ SDGS
Sbjct: 58 AWNRDTFLPTVGKRGAAIIDARGVSSAASAANAAIDHIHDWVLGTAG-KWTTMGIPSDGS 116
Query: 255 YGIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAEEK 301
YGIPEG+I+ FPVT E GE+ IV+GL +D FS+ +++ T EL EE+
Sbjct: 117 YGIPEGVIFGFPVTTENGEYKIVQGLSIDAFSQERINVTLNELLEEQ 163
>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 154
Score = 119 bits (299), Expect = 8e-34
Identities = 69/133 (51%), Positives = 92/133 (69%)
Query: 1 MIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 60
I G + G DQP+IL +LDI P L+GV MEL D A PLLK V+AT A KD++
Sbjct: 22 SIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLD 81
Query: 61 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKE 120
+A++VG PR++GMERKD++ NV I+K Q +AL+K+A + KV+VV NPANTN L +
Sbjct: 82 VAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTASK 141
Query: 121 FAPSIPAKNITCL 133
APSIP +N +CL
Sbjct: 142 SAPSIPKENFSCL 154
>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus
thermophilus [TaxId: 274]}
Length = 154
Score = 116 bits (292), Expect = 8e-33
Identities = 70/131 (53%), Positives = 86/131 (65%)
Query: 1 MIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 60
IA G MLG DQPVIL +L+I A +AL GV MEL D AFPLL G+ AT D A KD +
Sbjct: 23 RIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDAD 82
Query: 61 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKE 120
A++VG PRK GMER+D++ N I+ Q AL + A + KVLVV NPANTNALI +
Sbjct: 83 YALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYK 142
Query: 121 FAPSIPAKNIT 131
AP + +N T
Sbjct: 143 NAPGLNPRNFT 153
>d1ldma2 d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfish
(Squalus acanthias) [TaxId: 7797]}
Length = 169
Score = 116 bits (292), Expect = 1e-32
Identities = 21/166 (12%), Positives = 44/166 (26%), Gaps = 6/166 (3%)
Query: 134 TRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVAD 193
LD R + ERL VH +I H + + +
Sbjct: 3 CNLDSARFRYLMGERLGVHSCSCHGWVIGE-HGDSVPSVWSGMN----VASIKLHPLDGT 57
Query: 194 DNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDG 253
+ +A + A + + + ++ +
Sbjct: 58 NKDKQDWKKLHKDVVDSAYEVIKLKGYTSWAIGLSVADLAETIMKNLCR-VHPVSTMVKD 116
Query: 254 SYGIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAE 299
YGI + + S P S + +K+ ++ +A L +
Sbjct: 117 FYGIKDNVFLSLPCVLNDHGISNIVKMKLKPNEEQQLQKSATTLWD 162
>d1i0za2 d.162.1.1 (A:161-332) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 172
Score = 116 bits (291), Expect = 1e-32
Identities = 28/168 (16%), Positives = 57/168 (33%), Gaps = 3/168 (1%)
Query: 134 TRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVAD 193
LD R ++E+L +H S + I G H + + V ++ E D
Sbjct: 3 CNLDSARFRYLMAEKLGIHPSSC-HGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTD 61
Query: 194 DNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDG 253
++ N + + + A + K + + A + + G
Sbjct: 62 NDSENWKEVHKMVVESAYEVIKLKGYT--NWAIGLSVADLIESMLKNLSRIHPVSTMVKG 119
Query: 254 SYGIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAEEK 301
YGI + S P + V K+ + A++ +A+ L + +
Sbjct: 120 MYGIENEVFLSLPCILNARGLTSVINQKLKDDEVAQLKKSADTLWDIQ 167
>d2ldxa2 d.162.1.1 (A:160-331) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 172
Score = 114 bits (286), Expect = 9e-32
Identities = 25/168 (14%), Positives = 50/168 (29%), Gaps = 3/168 (1%)
Query: 134 TRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVAD 193
LD R I E+L V+ + + + G H + P + V + D
Sbjct: 3 CNLDSARFRYLIGEKLGVNPTSC-HGWVLGEHGDSSVPIWSGVNVAGVTLKSLNPAIGTD 61
Query: 194 DNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDG 253
N + + + G + K + S A + + G
Sbjct: 62 KNKQHWKNVHKQVVEGGYEVLDMKGYT--SWAIGLSVTDLARSILKNLKRVHPVTTLVKG 119
Query: 254 SYGIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAEEK 301
+GI E + S P + + + + + +A+ L +
Sbjct: 120 FHGIKEEVFLSIPCVLGESGITDFVKVNMTAEEEGLLKKSADTLWNMQ 167
>d1guza2 d.162.1.1 (A:143-305) Malate dehydrogenase {Chlorobium
vibrioforme [TaxId: 1098]}
Length = 163
Score = 114 bits (285), Expect = 9e-32
Identities = 31/164 (18%), Positives = 60/164 (36%), Gaps = 9/164 (5%)
Query: 136 LDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADDN 195
LD R I+ L V + D+ N + G H P V + + +
Sbjct: 4 LDAARFRSFIAMELGVSMQDI-NACVLGGHGDAMVPVVKY------TTVAGIPISDLLPA 56
Query: 196 WLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSY 255
+ + + GA I++ K SA A +S+ + + ++ K + V +G Y
Sbjct: 57 ETIDKLVERTRNGGAEIVEHLKQGSAFYAPASSVVEMVESIVLDRKR-VLPCAVGLEGQY 115
Query: 256 GIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAE 299
GI + + G I + +D+ + +A+ + E
Sbjct: 116 GIDKTFVGVPVKLGRNGVEQIY-EINLDQADLDLLQKSAKIVDE 158
>d1llda2 d.162.1.1 (A:150-319) Lactate dehydrogenase
{Bifidobacterium longum, strain am101-2 [TaxId: 216816]}
Length = 170
Score = 112 bits (280), Expect = 6e-31
Identities = 32/167 (19%), Positives = 59/167 (35%), Gaps = 5/167 (2%)
Query: 134 TRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVR-EAVA 192
T LD R I+++ V+V +V + I G H ++ P AT+
Sbjct: 1 TNLDSARLRFLIAQQTGVNVKNV-HAYIAGEHGDSEVPLWESATIGGVPMSDWTPLPGHD 59
Query: 193 DDNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSD 252
+ E I + A I K ++ + S D I + T + + +
Sbjct: 60 PLDADKREEIHQEVKNAAYKIINGKGATNYAIGMSGVDIIEAVLHDTNR--ILPVSSMLK 117
Query: 253 GSYGIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAE 299
+GI + + + +G + V + A + +AE L E
Sbjct: 118 DFHGISDICMSVPTLLNRQG-VNNTINTPVSDKELAALKRSAETLKE 163
>d2cmda2 d.162.1.1 (A:146-312) Malate dehydrogenase {Escherichia
coli [TaxId: 562]}
Length = 167
Score = 110 bits (276), Expect = 3e-30
Identities = 21/168 (12%), Positives = 51/168 (30%), Gaps = 13/168 (7%)
Query: 134 TRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVAD 193
T LD R+ ++E +V+ +I G+ T P ++ V+
Sbjct: 2 TTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQVPG------------VSF 49
Query: 194 DNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDG 253
+ +Q G +++A+ + + + L + +
Sbjct: 50 TEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYV 109
Query: 254 SYGIPEGLIYSFPVTCEK-GEWSIVKGLKVDEFSRAKMDATAEELAEE 300
+S P+ K G + F + ++ + L ++
Sbjct: 110 EGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKD 157
>d1uxja2 d.162.1.1 (A:144-307) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 164
Score = 109 bits (273), Expect = 6e-30
Identities = 32/165 (19%), Positives = 62/165 (37%), Gaps = 9/165 (5%)
Query: 136 LDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADDN 195
LD R I+ V V DV ++ G H P +T++ + +
Sbjct: 4 LDAARYRTFIAMEAGVSVKDV-QAMLMGGHGDEMVPLPRFSTISGIPVSEFI------AP 56
Query: 196 WLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSY 255
+ + ++ G I+ K SA A ++A + + VL K + + Y G Y
Sbjct: 57 DRLAQIVERTRKGGGEIVNLLKTGSAYYAPAAATAQMVEAVLKDKKR-VMPVAAYLTGQY 115
Query: 256 GIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAEE 300
G+ + + G + L ++E A ++A+A+ +
Sbjct: 116 GLNDIYFGVPVILGAGG-VEKILELPLNEEEMALLNASAKAVRAT 159
>d1y6ja2 d.162.1.1 (A:149-317) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 169
Score = 108 bits (271), Expect = 1e-29
Identities = 32/167 (19%), Positives = 61/167 (36%), Gaps = 4/167 (2%)
Query: 134 TRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVAD 193
T LD R +SE+L V V +V + I G H +Q P + + + + + +
Sbjct: 1 TVLDSIRFRYLLSEKLGVDVKNV-HGYIIGEHGDSQLPLWSCTHIAGKNINEYIDDPKCN 59
Query: 194 DNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDG 253
+ + I + A I K ++ A S + + + T ++G +G
Sbjct: 60 FTEEDKKKIAEDVKTAGATIIKNKGATYYGIAVSINTIVETLL--KNQNTIRTVGTVING 117
Query: 254 SYGIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAEE 300
YGI + I P V + + +AE++ +
Sbjct: 118 MYGIEDVAIS-LPSIVNSEGVQEVLQFNLTPEEEEALRFSAEQVKKV 163
>d1mlda2 d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 169
Score = 107 bits (268), Expect = 3e-29
Identities = 26/167 (15%), Positives = 54/167 (32%), Gaps = 12/167 (7%)
Query: 134 TRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVAD 193
T LD RA ++E + + V +I G+ T P ++ T + +
Sbjct: 2 TTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTIIPLISQCTPKVDFPQDQLS----- 56
Query: 194 DNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDG 253
+Q+ G ++KA+ + + + + + + L + S
Sbjct: 57 ------TLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVECSFV 110
Query: 254 SYGIPEGLIYSFPVTCEK-GEWSIVKGLKVDEFSRAKMDATAEELAE 299
+ +S P+ K G + K+ F + EL
Sbjct: 111 KSQETDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKA 157
>d1pzga2 d.162.1.1 (A:164-334) Lactate dehydrogenase {Toxoplasma
gondii [TaxId: 5811]}
Length = 174
Score = 105 bits (263), Expect = 2e-28
Identities = 34/166 (20%), Positives = 64/166 (38%), Gaps = 4/166 (2%)
Query: 136 LDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADDN 195
LD R +++ L V DV + G H P V + TV +K +++ V +
Sbjct: 4 LDSGRFRRYVADALSVSPRDV-QATVIGTHGDCMVPLVRYITVNGYPIQKFIKDGVVTEK 62
Query: 196 WLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSY 255
L E + G I++ SA A +++ + L K + VY +G Y
Sbjct: 63 QLE-EIAEHTKVSGGEIVRFLGQGSAYYAPAASAVAMATSFLNDEKR-VIPCSVYCNGEY 120
Query: 256 GIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAEEK 301
G+ + I P V L+++E + + + +++
Sbjct: 121 GLKDMFIGL-PAVIGGAGIERVIELELNEEEKKQFQKSVDDVMALN 165
>d1ldna2 d.162.1.1 (A:163-330) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 168
Score = 104 bits (260), Expect = 5e-28
Identities = 27/173 (15%), Positives = 52/173 (30%), Gaps = 5/173 (2%)
Query: 134 TRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVAD 193
T LD R + E V +V + I G H T+ P + A + K V +
Sbjct: 1 TILDTARFRFLLGEYFSVAPQNV-HAYIIGEHGDTELPVWSQAYIGVMPIRKLVESKGEE 59
Query: 194 DNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDG 253
+ E I + A I +K ++ A R +
Sbjct: 60 AQK-DLERIFVNVRDAAYQIIEKKGATYYGIAMGLARVTRAI---LHNENAILTVSAYLD 115
Query: 254 SYGIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLAYS 306
+ P + V +++++ + + +A L A++
Sbjct: 116 GLYGERDVYIGVPAVINRNGIREVIEIELNDDEKNRFHHSAATLKSVLARAFT 168
>d1hyea2 d.162.1.1 (A:146-313) MJ0490, lactate/malate dehydrogenase
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 168
Score = 102 bits (254), Expect = 4e-27
Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 8/168 (4%)
Query: 134 TRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVAD 193
T LD R I++ VH+ +V I G H + P ++ ++ +K
Sbjct: 3 THLDSLRFKVAIAKFFGVHIDEV-RTRIIGEHGDSMVPLLSATSIGGIPIQKFE-----R 56
Query: 194 DNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDG 253
L + I + I K S A++ + +R V + +++ Y DG
Sbjct: 57 FKELPIDEIIEDVKTKGEQIIRLKGGSEFGPAAAILNVVRCIV--NNEKRLLTLSAYVDG 114
Query: 254 SYGIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAEEK 301
+ + PV + V +++D+ +AE + +
Sbjct: 115 EFDGIRDVCIGVPVKIGRDGIEEVVSIELDKDEIIAFRKSAEIIKKYC 162
>d1ez4a2 d.162.1.1 (A:163-334) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 171
Score = 101 bits (253), Expect = 5e-27
Identities = 28/167 (16%), Positives = 52/167 (31%), Gaps = 6/167 (3%)
Query: 134 TRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVAD 193
T LD +R + ++ V V + I G H +++ + AT G +PVR+ +
Sbjct: 1 TSLDSSRLRVALGKQFNVDPRSV-DAYIMGEHGDSEFAAYSTAT----IGTRPVRDVAKE 55
Query: 194 DNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDG 253
+ + L A + + + +G Y DG
Sbjct: 56 QGVSDDDLAKLEDGVRNKAYDIINLKGATFYGIGTALMRISKAILRDENAVLPVGAYMDG 115
Query: 254 SYGIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAEE 300
YG+ + P + + KM +A L +
Sbjct: 116 QYGL-NDIYIGTPAIIGGTGLKQIIESPLSADELKKMQDSAATLKKV 161
>d1llca2 d.162.1.1 (A:165-334) Lactate dehydrogenase {Lactobacillus
casei [TaxId: 1582]}
Length = 172
Score = 100 bits (249), Expect = 2e-26
Identities = 36/167 (21%), Positives = 62/167 (37%), Gaps = 5/167 (2%)
Query: 134 TRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVAD 193
T LD R I+E + V V + I G H T++P +HA + + V+
Sbjct: 1 TSLDTARFRQSIAEMVNVDARSV-HAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEI 59
Query: 194 DNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDG 253
+ V+ IIK L A + + + + + VY DG
Sbjct: 60 KEDKLVKMFEDVRDAAYEIIK---LKGATFYGIATALARISKAILNDENAVLPLSVYMDG 116
Query: 254 SYGIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAEE 300
YGI + I + V G +I+ + + + M +A +L +
Sbjct: 117 QYGINDLYIGTPAVINRNGIQNIL-EIPLTDHEEESMQKSASQLKKV 162
>d1a5za2 d.162.1.1 (A:164-333) Lactate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 172
Score = 100 bits (249), Expect = 2e-26
Identities = 32/167 (19%), Positives = 55/167 (32%), Gaps = 5/167 (2%)
Query: 134 TRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVAD 193
T LD R I++ V +V + G H ++ P + A + + +
Sbjct: 2 TVLDTARLRTLIAQHCGFSPRSV-HVYVIGEHGDSEVPVWSGAMIGGIPLQNMCQVCQKC 60
Query: 194 DNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDG 253
D+ + F + R A I RK ++ + A + D + V
Sbjct: 61 DSKILENFAEKTK-RAAYEIIERKGATHYAIALAVADIVESI---FFDEKRVLTLSVYLE 116
Query: 254 SYGIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAEE 300
Y + L S PVT K + L ++E +A L
Sbjct: 117 DYLGVKDLCISVPVTLGKHGVERILELNLNEEELEAFRKSASILKNA 163
>d1hyha2 d.162.1.1 (A:167-329) L-2-hydroxyisocapronate
dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId:
1583]}
Length = 163
Score = 95.7 bits (237), Expect = 8e-25
Identities = 23/167 (13%), Positives = 52/167 (31%), Gaps = 13/167 (7%)
Query: 134 TRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVAD 193
T LD R + E + V + G H ++Q+ + V +AD
Sbjct: 2 TLLDTARMQRAVGEAFDLDPRSV-SGYNLGEHGNSQFVAWSTVRVM-----GQPIVTLAD 55
Query: 194 DNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDG 253
++ I ++G + K ++ A+SA + +
Sbjct: 56 AGDIDLAAIEEEARKGGFTVLNGKGYTSYGVATSAIRIAKAV-------MADAHAELVVS 108
Query: 254 SYGIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAEE 300
+ G+ S+P + L + + K+ + + + +
Sbjct: 109 NRRDDMGMYLSYPAIIGRDGVLAETTLDLTTDEQEKLLQSRDYIQQR 155
>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria
parasite (Plasmodium falciparum) [TaxId: 5833]}
Length = 165
Score = 93.4 bits (231), Expect = 9e-24
Identities = 34/169 (20%), Positives = 58/169 (34%), Gaps = 6/169 (3%)
Query: 136 LDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVADDN 195
LD +R IS++L V DV I+ G H + + TV ++ + + D
Sbjct: 3 LDTSRLKYYISQKLNVCPRDVNAHIV-GAHGNKMVLLKRYITVGGIPLQEFINNKLISDA 61
Query: 196 WLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDGSY 255
L I A I S ++ A++ + ++ + +G Y
Sbjct: 62 ELEA--IFDRTVNTALEIVNLHASPYVAPAAAIIEMAESYL--KDLKKVLICSTLLEGQY 117
Query: 256 GIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAEEKTLA 304
+ PV V L+++ +AK D E K LA
Sbjct: 118 -GHSDIFGGTPVVLGANGVEQVIELQLNSEEKAKFDEAIAETKRMKALA 165
>d1o6za2 d.162.1.1 (A:163-330) Malate dehydrogenase {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 161
Score = 87.6 bits (216), Expect = 9e-22
Identities = 30/167 (17%), Positives = 57/167 (34%), Gaps = 13/167 (7%)
Query: 134 TRLDHNRAMGQISERLKVHVSDVKNVIIWGNHSSTQYPDVNHATVTTSKGEKPVREAVAD 193
RLD R +SE V +V I G H Q P + +V + +
Sbjct: 3 GRLDSARFRYVLSEEFDAPVQNV-EGTILGEHGDAQVPVFSKVSVDGTDP---------E 52
Query: 194 DNWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGTWVSMGVYSDG 253
+ E + Q A + RK ++ A + + T + S+ +
Sbjct: 53 FSGDEKEQLLGDLQESAMDVIERKGATEWGPARGVAHMVEAILHDTGEVLPASVKLEG-- 110
Query: 254 SYGIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAEE 300
E + PV+ + +D++ + M AE+L+++
Sbjct: 111 -EFGHEDTAFGVPVSLGSNGVEEIVEWDLDDYEQDLMADAAEKLSDQ 156
>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli
[TaxId: 562]}
Length = 145
Score = 75.8 bits (186), Expect = 2e-17
Identities = 31/143 (21%), Positives = 53/143 (37%), Gaps = 16/143 (11%)
Query: 1 MIARGIMLGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVN 60
++ + G + L + DI P GV ++L + + D A + +
Sbjct: 19 LLKTQLPSGSE----LSLYDIAPVTP---GVAVDLSHIPTAVKIKGFSGEDATPALEGAD 71
Query: 61 IAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKE 120
+ ++ G RK GM+R D+ + N I K + K P + ++ NP NT I E
Sbjct: 72 VVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKT-CPKACIGIITNPVNTTVAIAAE 130
Query: 121 FAPSIPAKNITCLTRLDHNRAMG 143
D N+ G
Sbjct: 131 VLKK--------AGVYDKNKLFG 145
>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 144
Score = 71.2 bits (174), Expect = 8e-16
Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 14/129 (10%)
Query: 16 LHMLDIEPAAEALNGVKMELIDAAFPL-LKGVVATTDVVEACKDVNIAVMVGGFPRKEGM 74
L + DI GV +L +KG + + + K ++ V+ G PRK GM
Sbjct: 29 LTLYDIAHT----PGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGM 84
Query: 75 ERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLT 134
R D+ + N +I +A P+ + +++NP N+ I E
Sbjct: 85 TRDDLFNTNATIVATLTAAC-AQHCPDAMICIISNPVNSTIPITAEVFKK--------HG 135
Query: 135 RLDHNRAMG 143
+ N+ G
Sbjct: 136 VYNPNKIFG 144
>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 142
Score = 66.1 bits (161), Expect = 4e-14
Identities = 22/128 (17%), Positives = 40/128 (31%), Gaps = 14/128 (10%)
Query: 16 LHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGME 75
+ +DI + G + E ++ V+ G PR+ G
Sbjct: 29 VVFVDIPDKEDDTVGQAADTNHGI-AYDSNTRVRQGGYEDTAGSDVVVITAGIPRQPGQT 87
Query: 76 RKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTR 135
R D+ N I + S+L++H + L +NP + L E
Sbjct: 88 RIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSNPVDLLNRHLYE------------AGD 134
Query: 136 LDHNRAMG 143
+ +G
Sbjct: 135 RSREQVIG 142
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium
vibrioforme [TaxId: 1098]}
Length = 142
Score = 64.7 bits (157), Expect = 1e-13
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
Query: 16 LHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGME 75
L +LD+ + M V + D + +I ++ G PRK GM
Sbjct: 28 LVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDY-ADTANSDIVIITAGLPRKPGMT 86
Query: 76 RKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFA 122
R+D++ KN I K + KH + N ++VV+NP + + +
Sbjct: 87 REDLLMKNAGIVKEVTDNIMKH-SKNPIIIVVSNPLDIMTHVAWVRS 132
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium
longum, strain am101-2 [TaxId: 216816]}
Length = 143
Score = 62.7 bits (152), Expect = 7e-13
Identities = 27/132 (20%), Positives = 56/132 (42%), Gaps = 13/132 (9%)
Query: 12 QPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRK 71
+ + ++ + A E + +++ + + +D E C+D ++ V+ G +K
Sbjct: 23 RGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGPRQK 82
Query: 72 EGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNIT 131
G R +++ V+I KA L K A PN +++ NP + + ++
Sbjct: 83 PGQSRLELVGATVNILKAIMPNLVKVA-PNAIYMLITNPVDIATHVAQK----------- 130
Query: 132 CLTRLDHNRAMG 143
LT L N+ G
Sbjct: 131 -LTGLPENQIFG 141
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 140
Score = 58.9 bits (142), Expect = 2e-11
Identities = 25/132 (18%), Positives = 50/132 (37%), Gaps = 14/132 (10%)
Query: 12 QPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRK 71
+ M+ I+ + G ++LI P + K ++ ++ G P+K
Sbjct: 22 KGFAREMVLIDVDKKRAEGDALDLIHGT-PFTRRANIYAGDYADLKGSDVVIVAAGVPQK 80
Query: 72 EGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNIT 131
G R ++ +N + K A + K+ AP+ V+VV NP + +
Sbjct: 81 PGETRLQLLGRNARVMKEIARNVSKY-APDSIVIVVTNPVDVLTYFFLK----------- 128
Query: 132 CLTRLDHNRAMG 143
+ +D + G
Sbjct: 129 -ESGMDPRKVFG 139
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 142
Score = 56.2 bits (135), Expect = 1e-10
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 21 IEPAAEALNGVKMELIDAAFPLLKGVVAT-TDVVEACKDVNIAVMVGGFPRKEGMERKDV 79
++ A + G M+L AA + K K I V+ G RK GM R D+
Sbjct: 31 VDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLARKPGMTRLDL 90
Query: 80 MSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFA 122
KN I K A + AP K+LVV NP + I+ + +
Sbjct: 91 AHKNAGIIKDIAKKI-VENAPESKILVVTNPMDVMTYIMWKES 132
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 146
Score = 55.0 bits (132), Expect = 5e-10
Identities = 24/129 (18%), Positives = 44/129 (34%), Gaps = 13/129 (10%)
Query: 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGM 74
I I + ++ A + CKD ++ V+ G P+K G
Sbjct: 29 IAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAPQKPGE 88
Query: 75 ERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLT 134
R D+++KN++I + + + LV ANP + +F +
Sbjct: 89 SRLDLVNKNLNILSSIVKPVVDSG-FDGIFLVAANPVDILTYATWKF------------S 135
Query: 135 RLDHNRAMG 143
R +G
Sbjct: 136 GFPKERVIG 144
>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 145
Score = 54.0 bits (129), Expect = 9e-10
Identities = 24/130 (18%), Positives = 50/130 (38%), Gaps = 17/130 (13%)
Query: 17 HMLDIEPAAEALNGVKMELIDAAFPLL---KGVVATTDVVEACKDVNIAVMVGGFPRKEG 73
++ E + L G++ ++ DA V + + + + ++ ++ G PRKEG
Sbjct: 30 VLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVIITSGVPRKEG 89
Query: 74 MERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL 133
M R D+ N I A + + + K+ V+ NP +
Sbjct: 90 MSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFVITNPVDVMTYKALVD------------ 135
Query: 134 TRLDHNRAMG 143
++ + N+ G
Sbjct: 136 SKFERNQVFG 145
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase,
L-HICDH {Lactobacillus confusus [TaxId: 1583]}
Length = 146
Score = 52.0 bits (124), Expect = 5e-09
Identities = 17/136 (12%), Positives = 48/136 (35%), Gaps = 17/136 (12%)
Query: 12 QPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPR- 70
Q V + I+ + +++ DA L + A D ++ + G +
Sbjct: 23 QGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADADVVISTLGNIKL 82
Query: 71 ---KEGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPA 127
+R + S+ ++ + L++ + ++V++NP + + +
Sbjct: 83 QQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVISNPVDVITALFQH------- 134
Query: 128 KNITCLTRLDHNRAMG 143
+T ++ +G
Sbjct: 135 -----VTGFPAHKVIG 145
>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga
maritima [TaxId: 2336]}
Length = 162
Score = 52.4 bits (125), Expect = 5e-09
Identities = 12/145 (8%), Positives = 39/145 (26%), Gaps = 23/145 (15%)
Query: 1 MIARGIMLGPDQPVI--LHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKD 58
+ +G++ + I + DI+ + + ++ + V+ + A D
Sbjct: 15 ELVKGLLDISEDVRIDEVIFYDIDEEKQ---KIVVDFVKRLVKDRFKVLISDTFEGAVVD 71
Query: 59 VNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAS------------------ALEKHAAP 100
+ +G E + + + + +
Sbjct: 72 AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS 131
Query: 101 NCKVLVVANPANTNALILKEFAPSI 125
N ++ NP+ ++ +
Sbjct: 132 NATIVNFTNPSGHITEFVRNYLEYE 156
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 148
Score = 51.2 bits (122), Expect = 1e-08
Identities = 26/132 (19%), Positives = 50/132 (37%), Gaps = 13/132 (9%)
Query: 12 QPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRK 71
Q + ++ I+ G M+ K V + C+D ++ V+ G +K
Sbjct: 28 QGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGANQK 87
Query: 72 EGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNIT 131
G R D++ KN++I+++ ++ LV NP + +F
Sbjct: 88 PGETRLDLVDKNIAIFRSIVESVMAS-GFQGLFLVATNPVDILTYATWKF---------- 136
Query: 132 CLTRLDHNRAMG 143
+ L H R +G
Sbjct: 137 --SGLPHERVIG 146
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 142
Score = 50.8 bits (121), Expect = 1e-08
Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 16/128 (12%)
Query: 16 LHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGME 75
L ++D+ E G M++ P + + KD ++ V+ G RK G
Sbjct: 29 LVLIDV--FKEKAIGEAMDINHGL-PFMGQMSLYAGDYSDVKDCDVIVVTAGANRKPGET 85
Query: 76 RKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTR 135
R D+ KNV I K + + +LVV+NP + +++++ +
Sbjct: 86 RLDLAKKNVMIAKEVTQNI-MKYYNHGVILVVSNPVDIITYMIQKW------------SG 132
Query: 136 LDHNRAMG 143
L + +G
Sbjct: 133 LPVGKVIG 140
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 142
Score = 49.7 bits (118), Expect = 3e-08
Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 14/131 (10%)
Query: 15 ILHMLDIEPAAEALNGVKMELIDAAFPLLKGV-VATTDVVEACKDVNIAVMVGGFPRKEG 73
+ ++ ++ G ++L +A+ V V T+ + ++ V+ G PRK G
Sbjct: 25 LGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVVTSGAPRKPG 84
Query: 74 MERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCL 133
M R+D++ N I +A S +PN +++V NP + + E +
Sbjct: 85 MSREDLIKVNADITRACISQ-AAPLSPNAVIIMVNNPLDAMTYLAAE------------V 131
Query: 134 TRLDHNRAMGQ 144
+ R +GQ
Sbjct: 132 SGFPKERVIGQ 142
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 159
Score = 49.2 bits (117), Expect = 5e-08
Identities = 24/128 (18%), Positives = 51/128 (39%), Gaps = 15/128 (11%)
Query: 16 LHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGME 75
L ++D + + L G ++L + L + + + ++ G G
Sbjct: 47 LALVDADT--DKLRGEALDLQHGSLFLSTPKIVFGKDYNVSANSKLVIITAGARMVSGQT 104
Query: 76 RKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTR 135
R D++ +NV+I KA +P+CK++VV NP + ++ + ++
Sbjct: 105 RLDLLQRNVAIMKAIVPG-VIQNSPDCKIIVVTNPVDILTYVVWK------------ISG 151
Query: 136 LDHNRAMG 143
R +G
Sbjct: 152 FPVGRVIG 159
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 160
Score = 48.5 bits (115), Expect = 1e-07
Identities = 25/132 (18%), Positives = 58/132 (43%), Gaps = 13/132 (9%)
Query: 12 QPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRK 71
+ + + ++ + L G M+L + L + + I V+ G ++
Sbjct: 42 KSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQ 101
Query: 72 EGMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNIT 131
EG R +++ +NV+++K + K+ +P+C ++VV+NP + + +
Sbjct: 102 EGESRLNLVQRNVNVFKFIIPQIVKY-SPDCIIIVVSNPVDILTYVTWK----------- 149
Query: 132 CLTRLDHNRAMG 143
L+ L +R +G
Sbjct: 150 -LSGLPKHRVIG 160
>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA
{Bacillus subtilis [TaxId: 1423]}
Length = 167
Score = 46.9 bits (111), Expect = 4e-07
Identities = 19/130 (14%), Positives = 38/130 (29%), Gaps = 21/130 (16%)
Query: 16 LHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGME 75
L + D + + ++ ATTD EA DV+ + +
Sbjct: 35 LKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVMAHIRVGKYAMRA 94
Query: 76 RKDVMSKN--------------------VSIYKAQASALEKHAAPNCKVLVVANPANTNA 115
+ + + +EK++ P+ +L +NPA A
Sbjct: 95 LDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYS-PDAWMLNYSNPAAIVA 153
Query: 116 LILKEFAPSI 125
+ P+
Sbjct: 154 EATRRLRPNS 163
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii
[TaxId: 5811]}
Length = 154
Score = 44.7 bits (105), Expect = 2e-06
Identities = 19/133 (14%), Positives = 43/133 (32%), Gaps = 18/133 (13%)
Query: 16 LHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEG-- 73
+ + D+ + + + + V A A + ++ G + G
Sbjct: 34 VVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAGLTKVPGKP 93
Query: 74 ---MERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNI 130
R D++ N I + ++K+ P ++VV NP + ++ E
Sbjct: 94 DSEWSRNDLLPFNSKIIREIGQNIKKY-CPKTFIIVVTNPLDCMVKVMCE---------- 142
Query: 131 TCLTRLDHNRAMG 143
+ + N G
Sbjct: 143 --ASGVPTNMICG 153
>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 169
Score = 43.1 bits (101), Expect = 7e-06
Identities = 14/131 (10%), Positives = 33/131 (25%), Gaps = 21/131 (16%)
Query: 16 LHMLDIEPAAEALNGVKM--ELIDAAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEG 73
L ++DI E L V + + + + T D A + E
Sbjct: 33 LWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADFVTTQFRVGGLEA 92
Query: 74 MERKDVMSKNVSIYKAQASALE-------------------KHAAPNCKVLVVANPANTN 114
+ + + + + + + P+ ++ NPA
Sbjct: 93 RAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMV 152
Query: 115 ALILKEFAPSI 125
+ +
Sbjct: 153 TEAVLRYTKQE 163
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 150
Score = 41.6 bits (97), Expect = 2e-05
Identities = 18/111 (16%), Positives = 41/111 (36%), Gaps = 18/111 (16%)
Query: 38 AAFPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEGME-----RKDVMSKNVSIYKAQAS 92
V+ ++ + ++ ++ GF + G R D++ N I
Sbjct: 51 NVMAYSNCKVSGSNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGG 110
Query: 93 ALEKHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRAMG 143
++K+ PN ++VV NP + +L + + + N+ +G
Sbjct: 111 HIKKNC-PNAFIIVVTNPVDVMVQLLHQ------------HSGVPKNKIIG 148
>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga
maritima [TaxId: 2336]}
Length = 171
Score = 38.6 bits (89), Expect = 3e-04
Identities = 16/136 (11%), Positives = 35/136 (25%), Gaps = 31/136 (22%)
Query: 16 LHMLDIEPAAEALNGVKMELIDAA--FPLLKGVVATTDVVEACKDVNIAVMVGGFPRKEG 73
+ ++DI+ E L+ + T ++ + D + +
Sbjct: 34 VTLMDIDE--ERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVINTAMVGGHTY 91
Query: 74 MERKDV--------------------------MSKNVSIYKAQASALEKHAAPNCKVLVV 107
+E+ + + A +EK + P L
Sbjct: 92 LEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLS-PKAWYLQA 150
Query: 108 ANPANTNALILKEFAP 123
ANP ++ P
Sbjct: 151 ANPIFEGTTLVTRTVP 166
>d1o51a_ d.58.5.4 (A:) Hypothetical protein TM0021 {Thermotoga
maritima [TaxId: 2336]}
Length = 102
Score = 26.5 bits (59), Expect = 1.5
Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 7/50 (14%)
Query: 8 LGPDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVVATTDVVEACK 57
L PD P++L ++D E ++ ID + + T V K
Sbjct: 60 LSPDLPIVLEIVDEEERINLF----LKEIDN---IDFDGLVFTADVNVVK 102
>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase
(ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId:
4081]}
Length = 428
Score = 27.3 bits (59), Expect = 2.6
Identities = 10/70 (14%), Positives = 19/70 (27%), Gaps = 10/70 (14%)
Query: 168 TQYPDVNHATVTTSKGEKPVREAVADDNWLNTEFITTVQQRGAAIIKARKLSSALSAASS 227
+ D G R+A+A ++ V+ ++ A + A
Sbjct: 77 ANFQD--------YHGLPEFRKAIAK--FMEKTRGGRVRFDPERVVMAGGATGANETIIF 126
Query: 228 ACDHIRDWVL 237
D L
Sbjct: 127 CLADPGDAFL 136
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus
stearothermophilus, PcrA [TaxId: 1422]}
Length = 623
Score = 26.5 bits (57), Expect = 5.8
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 271 KG-EWSIV--KGLKVDEFSRAKMDATAEELAEEKTLAY 305
KG E+ +V G++ F + +E+ EE+ LAY
Sbjct: 540 KGLEFPVVFLIGMEEGIFPHNRSLEDDDEMEEERRLAY 577
>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT
{Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Length = 388
Score = 25.6 bits (55), Expect = 8.1
Identities = 7/40 (17%), Positives = 18/40 (45%)
Query: 73 GMERKDVMSKNVSIYKAQASALEKHAAPNCKVLVVANPAN 112
G + +V + ++ L+K+ + L++ +P N
Sbjct: 131 GGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCN 170
>d1rq8a_ d.68.4.1 (A:) Hypothetical protein SAV1595 {Staphylococcus
aureus, (strain Mu50 / ATCC 700699) [TaxId: 1280]}
Length = 96
Score = 24.3 bits (53), Expect = 9.5
Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Query: 253 GSYGIPEGLIYSFPVTCEKGEWSIVKGLKVDEFSRAKMDATAEELAEE 300
G GI E +I T E E + + V + + AE L+E
Sbjct: 24 GKGGINENMIKQIDDTLENRE---LIKVHVLQNNFDDKKELAETLSEA 68
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.131 0.382
Gapped
Lambda K H
0.267 0.0443 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,108,119
Number of extensions: 49241
Number of successful extensions: 195
Number of sequences better than 10.0: 1
Number of HSP's gapped: 144
Number of HSP's successfully gapped: 54
Length of query: 309
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 224
Effective length of database: 1,240,546
Effective search space: 277882304
Effective search space used: 277882304
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (24.9 bits)