BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>021651
MLQNSASSQIGAAGSDPLLNKVSAFRDACWRFLRPHTIRGTALGSVALVARALIENPNLI
KWSLLLKAFSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFF
AVTGLLIVAFNFGPFITSLYCLGLFLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGV
YYATRAALGLSFEWNAPVAFITAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKN
IAFLGSGLLLLNYVAAILAAIYMPQAFRRNLMIPAHVILASCLLFQTWLLERANYTKVIL
ATCCTLGMW

High Scoring Gene Products

Symbol, full name Information P value
HST
homogentisate prenyltransferase
protein from Arabidopsis thaliana 2.4e-122
HPT1
homogentisate phytyltransferase 1
protein from Arabidopsis thaliana 8.0e-37
SfN8DT-2
Naringenin 8-dimethylallyltransferase
protein from Sophora flavescens 3.6e-25
N8DT-1
Naringenin 8-dimethylallyltransferase 1, chloroplastic
protein from Sophora flavescens 5.9e-24
G4 protein from Arabidopsis thaliana 1.9e-09

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  021651
        (309 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:4010713740 - symbol:HST "homogentisate prenylt...  1203  2.4e-122  1
TAIR|locus:2044440 - symbol:HPT1 "homogentisate phytyltra...   396  8.0e-37   1
UNIPROTKB|B1B5P4 - symbol:SfN8DT-2 "Naringenin 8-dimethyl...   286  3.6e-25   1
UNIPROTKB|B1B3P3 - symbol:N8DT-1 "Naringenin 8-dimethylal...   275  5.9e-24   1
TAIR|locus:2074393 - symbol:G4 species:3702 "Arabidopsis ...   162  1.9e-09   1


>TAIR|locus:4010713740 [details] [associations]
            symbol:HST "homogentisate prenyltransferase"
            species:3702 "Arabidopsis thaliana" [GO:0004161
            "dimethylallyltranstransferase activity" evidence=NAS] [GO:0004659
            "prenyltransferase activity" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0010236 "plastoquinone biosynthetic process"
            evidence=IMP] [GO:0010355 "homogentisate farnesyltransferase
            activity" evidence=IDA] [GO:0010356 "homogentisate
            geranylgeranyltransferase activity" evidence=IDA] [GO:0010357
            "homogentisate solanesyltransferase activity" evidence=IDA]
            [GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009536
            "plastid" evidence=IDA] [GO:0016117 "carotenoid biosynthetic
            process" evidence=IMP] InterPro:IPR000537 Pfam:PF01040
            GO:GO:0016021 EMBL:CP002686 GO:GO:0009941 GO:GO:0016117
            GO:GO:0010236 IPI:IPI00938788 RefSeq:NP_001154609.1
            UniGene:At.71046 PRIDE:F4J8K0 EnsemblPlants:AT3G11945.2
            GeneID:5007993 KEGG:ath:AT3G11945 KO:K12501 OMA:TIYSVPP
            GO:GO:0010355 GO:GO:0010356 GO:GO:0010357 Uniprot:F4J8K0
        Length = 393

 Score = 1203 (428.5 bits), Expect = 2.4e-122, P = 2.4e-122
 Identities = 233/289 (80%), Positives = 257/289 (88%)

Query:    10 IGAAGSD-PLLNKVSAFRDACWRFLRPHTIRGTALGSVALVARALIENPNLIKWXXXXXX 68
             +GAA SD P+L++++ F++ACWRFLRPHTIRGTALGS ALV RALIEN +LIKW      
Sbjct:    81 VGAAESDDPVLDRIARFQNACWRFLRPHTIRGTALGSTALVTRALIENTHLIKWSLVLKA 140

Query:    69 XXXXXXXICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGLLIV 128
                    ICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAW LVIFFA+ GLL+V
Sbjct:   141 LSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWLLVIFFAIAGLLVV 200

Query:   129 AFNFGPFITSLYCLGLFLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAAL 188
              FNFGPFITSLY LGLFLGTIYSVPP RMKRF VAAFLIIATVRGFLLNFGVY+ATRAAL
Sbjct:   201 GFNFGPFITSLYSLGLFLGTIYSVPPLRMKRFPVAAFLIIATVRGFLLNFGVYHATRAAL 260

Query:   189 GLSFEWNAPVAFITAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKNIAFLGSGL 248
             GL F+W+APVAFIT+FVTLFALVIA+TKDLPDVEGDRKF+ISTLATKLGV+NIAFLGSGL
Sbjct:   261 GLPFQWSAPVAFITSFVTLFALVIAITKDLPDVEGDRKFQISTLATKLGVRNIAFLGSGL 320

Query:   249 LLLNYVAAILAAIYMPQAFRRNLMIPAHVILASCLLFQTWLLERANYTK 297
             LL+NYV+AI  A YMPQ FR +LMIPAHVILAS L+FQTW+LE+ANYTK
Sbjct:   321 LLVNYVSAISLAFYMPQVFRGSLMIPAHVILASGLIFQTWVLEKANYTK 369


>TAIR|locus:2044440 [details] [associations]
            symbol:HPT1 "homogentisate phytyltransferase 1"
            species:3702 "Arabidopsis thaliana" [GO:0004659 "prenyltransferase
            activity" evidence=IEA;IDA] [GO:0005886 "plasma membrane"
            evidence=ISM] [GO:0010189 "vitamin E biosynthetic process"
            evidence=IMP;TAS] [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=ISS] [GO:0010176 "homogentisate
            phytyltransferase activity" evidence=IMP;IDA] [GO:0042362
            "fat-soluble vitamin biosynthetic process" evidence=TAS]
            [GO:0009266 "response to temperature stimulus" evidence=IMP]
            [GO:0009915 "phloem sucrose loading" evidence=IMP] [GO:0031347
            "regulation of defense response" evidence=IMP] [GO:0006636
            "unsaturated fatty acid biosynthetic process" evidence=RCA;IMP]
            [GO:0071555 "cell wall organization" evidence=IMP] [GO:0000096
            "sulfur amino acid metabolic process" evidence=RCA] [GO:0006546
            "glycine catabolic process" evidence=RCA] [GO:0006733
            "oxidoreduction coenzyme metabolic process" evidence=RCA]
            [GO:0006766 "vitamin metabolic process" evidence=RCA] [GO:0008652
            "cellular amino acid biosynthetic process" evidence=RCA]
            [GO:0009072 "aromatic amino acid family metabolic process"
            evidence=RCA] [GO:0009106 "lipoate metabolic process" evidence=RCA]
            [GO:0009108 "coenzyme biosynthetic process" evidence=RCA]
            [GO:0009117 "nucleotide metabolic process" evidence=RCA]
            [GO:0009416 "response to light stimulus" evidence=RCA] [GO:0009695
            "jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
            "leaf morphogenesis" evidence=RCA] [GO:0015994 "chlorophyll
            metabolic process" evidence=RCA] [GO:0019216 "regulation of lipid
            metabolic process" evidence=RCA] [GO:0019288 "isopentenyl
            diphosphate biosynthetic process, mevalonate-independent pathway"
            evidence=RCA] [GO:0019748 "secondary metabolic process"
            evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
            [GO:0031408 "oxylipin biosynthetic process" evidence=RCA]
            [GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=RCA] InterPro:IPR000537 Pfam:PF01040 UniPathway:UPA00160
            GO:GO:0016021 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0006636 EMBL:AC003673 GO:GO:0071555 GO:GO:0009535
            GO:GO:0009266 GO:GO:0009915 GO:GO:0031347 eggNOG:COG0382
            GO:GO:0010189 EMBL:AF324344 EMBL:AY089963 EMBL:GU198365
            EMBL:AY063893 EMBL:AY113993 IPI:IPI00546170 PIR:T01623
            RefSeq:NP_849984.1 UniGene:At.27152 STRING:Q8VWJ1 PRIDE:Q8VWJ1
            GeneID:816412 KEGG:ath:AT2G18950 TAIR:At2g18950
            HOGENOM:HOG000264578 InParanoid:Q8VWJ1 KO:K09833 OMA:YQFIWKL
            PhylomeDB:Q8VWJ1 ProtClustDB:PLN02878 Genevestigator:Q8VWJ1
            GO:GO:0010176 Uniprot:Q8VWJ1
        Length = 393

 Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
 Identities = 104/314 (33%), Positives = 166/314 (52%)

Query:     4 NSASSQIGAAGSDPLLNKVSAFRD---ACWRFLRPHTIRGTALGSVALVARALIENPNLI 60
             N+ + Q  A  S+   +K  +FRD   A +RF RPHT+ GT L S+  V+   +E  + I
Sbjct:    75 NATAGQPEAFDSN---SKQKSFRDSLDAFYRFSRPHTVIGTVL-SILSVSFLAVEKVSDI 130

Query:    61 KWXXXXXXXXXXXXXICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFF 120
                            +  N YIVG+NQ+ D+ IDKVNKPYLP+A+G+ SV +   +V  F
Sbjct:   131 SPLLFTGILEAVVAALMMNIYIVGLNQLSDVEIDKVNKPYLPLASGEYSVNTGIAIVASF 190

Query:   121 AVTGLLIVAFNFG--PFITSLYCLGLFLGTIYSV--PPFRMKRFAVAAFLIIATVRGFLL 176
             ++    +  +  G  P   +L+ +   LGT YS+  P  R KRFA+ A + I  VR  ++
Sbjct:   191 SIMSFWL-GWIVGSWPLFWALF-VSFMLGTAYSINLPLLRWKRFALVAAMCILAVRAIIV 248

Query:   177 NFGVYYATRA-ALGLSFEWNAPVAFITAFVTLFALVIAVTKDLPDVEGDRKFKISTLATK 235
                 Y   +    G    +  P+ F TAF++ F++VIA+ KD+PD+EGD+ F I + +  
Sbjct:   249 QIAFYLHIQTHVFGRPILFTRPLIFATAFMSFFSVVIALFKDIPDIEGDKIFGIRSFSVT 308

Query:   236 LGVKNIAFLGSGLLLLNYVAAILAAIYMPQAFRRNLMIPAHVILASCLLFQTWLLERANY 295
             LG K + +    LL + Y  AIL     P  + + + +  HVILA+ L  +   ++ ++ 
Sbjct:   309 LGQKRVFWTCVTLLQMAYAVAILVGATSPFIWSKVISVVGHVILATTLWARAKSVDLSSK 368

Query:   296 TKVILATCCTLGMW 309
             T++   T C + +W
Sbjct:   369 TEI---TSCYMFIW 379


>UNIPROTKB|B1B5P4 [details] [associations]
            symbol:SfN8DT-2 "Naringenin 8-dimethylallyltransferase"
            species:49840 "Sophora flavescens" [GO:0004659 "prenyltransferase
            activity" evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA]
            InterPro:IPR000537 Pfam:PF01040 GO:GO:0016021 GO:GO:0009507
            GO:GO:0004659 EMBL:AB370330 BioCyc:MetaCyc:MONOMER-16838
            Uniprot:B1B5P4
        Length = 407

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 88/280 (31%), Positives = 141/280 (50%)

Query:    16 DP--LLNKVSAFRDACWRFLRPHTIRGTALGSV--ALVARALIENPNLIKWXXXXXXXXX 71
             DP  +   V+   D  ++F RP+ I    LG+   +LVA   +E  + +           
Sbjct:    99 DPKNIWGSVNDALDTFYKFCRPYAIFSVVLGATFKSLVA---VERLSDLSLAFFIGWLQV 155

Query:    72 XXXXICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGLLIVAFN 131
                 IC + + VG+NQ+ DI IDK+NKP LP+A+G+LS ++   +     + GL   A+ 
Sbjct:   156 VVAVICIHIFDVGLNQLCDIEIDKINKPDLPLASGNLSFRNVVIITASSLILGLGF-AWI 214

Query:   132 FG--PFITSLYCLGLFLGTIYSV--PPFRMKRFAV-AAFLIIATVRGFL-LNFGVYYATR 185
              G  P   +++   +F    Y+V  P  R K++ V  A   IA V     L F ++  T 
Sbjct:   215 VGSWPLFWTVFICCMFAAA-YNVDLPLLRWKKYPVLTAISFIANVAVTRSLGFFLHMQT- 272

Query:   186 AALGLSFEWNAPVAFITAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKNIAFLG 245
                     +  P+ F TA V+++A+VIA+ KD+PD+EGD KF I +L+ +LG K + ++ 
Sbjct:   273 CVFKRPTTFPRPLIFCTAIVSIYAIVIALFKDIPDMEGDEKFGIQSLSLRLGPKRVFWIC 332

Query:   246 SGLLLLNYVAAILAAIYMPQAFRRNLMIPAHVILASCLLF 285
               LL + Y   IL     P  + + + +  H ILAS L +
Sbjct:   333 VSLLEMAYGVTILVGATSPILWSKIITVLGHAILASVLWY 372


>UNIPROTKB|B1B3P3 [details] [associations]
            symbol:N8DT-1 "Naringenin 8-dimethylallyltransferase 1,
            chloroplastic" species:49840 "Sophora flavescens" [GO:0004659
            "prenyltransferase activity" evidence=IDA] [GO:0009507
            "chloroplast" evidence=IDA] InterPro:IPR000537 Pfam:PF01040
            GO:GO:0016021 GO:GO:0009507 GO:GO:0031969 GO:GO:0004659
            EMBL:AB325579 BioCyc:MetaCyc:MONOMER-16837 Uniprot:B1B3P3
        Length = 410

 Score = 275 (101.9 bits), Expect = 5.9e-24, P = 5.9e-24
 Identities = 83/279 (29%), Positives = 140/279 (50%)

Query:    16 DP--LLNKVSAFRDACWRFLRPHTIRGTALGSV--ALVARALIENPNLIKWXXXXXXXXX 71
             DP  + + V+   D  ++F RP+ +    LG+   +LVA   +E  + +           
Sbjct:   102 DPESIWDSVNDALDIFYKFCRPYAMFTIVLGATFKSLVA---VEKLSDLSLAFFIGWLQV 158

Query:    72 XXXXICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGLLIV-AF 130
                 IC + + VG+NQ+ DI IDK+NKP LP+A+G LS ++   +     + GL      
Sbjct:   159 VVAVICIHIFGVGLNQLCDIEIDKINKPDLPLASGKLSFRNVVIITASSLILGLGFAWIV 218

Query:   131 NFGPFITSLYCLGLFLGTIYSV--PPFRMKRFAV-AAFLIIATVRGFL-LNFGVYYATRA 186
             +  P   +++ +   + + Y+V  P  R K++ V  A   IA V     L F ++  T  
Sbjct:   219 DSWPLFWTVF-ISCMVASAYNVDLPLLRWKKYPVLTAINFIADVAVTRSLGFFLHMQT-C 276

Query:   187 ALGLSFEWNAPVAFITAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKNIAFLGS 246
                    +  P+ F TA V+++A+VIA+ KD+PD+EGD KF I +L+ +LG K + ++  
Sbjct:   277 VFKRPTTFPRPLIFCTAIVSIYAIVIALFKDIPDMEGDEKFGIQSLSLRLGPKRVFWICV 336

Query:   247 GLLLLNYVAAILAAIYMPQAFRRNLMIPAHVILASCLLF 285
              LL + Y   IL     P  + + + +  H +LAS L +
Sbjct:   337 SLLEMTYGVTILVGATSPILWSKIITVLGHAVLASVLWY 375


>TAIR|locus:2074393 [details] [associations]
            symbol:G4 species:3702 "Arabidopsis thaliana" [GO:0004659
            "prenyltransferase activity" evidence=IEA] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0015995 "chlorophyll
            biosynthetic process" evidence=RCA;TAS] [GO:0046408 "chlorophyll
            synthetase activity" evidence=IDA] [GO:0009534 "chloroplast
            thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
            evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
            [GO:0009073 "aromatic amino acid family biosynthetic process"
            evidence=RCA] [GO:0009902 "chloroplast relocation" evidence=RCA]
            [GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010027
            "thylakoid membrane organization" evidence=RCA] [GO:0016117
            "carotenoid biosynthetic process" evidence=RCA] [GO:0019288
            "isopentenyl diphosphate biosynthetic process,
            mevalonate-independent pathway" evidence=RCA] [GO:0019344 "cysteine
            biosynthetic process" evidence=RCA] [GO:0030154 "cell
            differentiation" evidence=RCA] [GO:0034660 "ncRNA metabolic
            process" evidence=RCA] [GO:0042793 "transcription from plastid
            promoter" evidence=RCA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=RCA] [GO:0009535
            "chloroplast thylakoid membrane" evidence=TAS] InterPro:IPR000537
            InterPro:IPR006372 InterPro:IPR011799 Pfam:PF01040 GO:GO:0016021
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0031969 EMBL:AF049236
            GO:GO:0009534 EMBL:U19382 EMBL:AY081481 EMBL:AY042821
            IPI:IPI00536017 PIR:S60222 RefSeq:NP_190750.1 UniGene:At.5423
            STRING:Q38833 PaxDb:Q38833 PRIDE:Q38833 EnsemblPlants:AT3G51820.1
            GeneID:824345 KEGG:ath:AT3G51820 TAIR:At3g51820 eggNOG:COG0382
            HOGENOM:HOG000149392 InParanoid:Q38833 KO:K04040 OMA:NDVKYQA
            PhylomeDB:Q38833 ProtClustDB:PLN00012 BioCyc:ARA:AT3G51820-MONOMER
            BioCyc:MetaCyc:AT3G51820-MONOMER Genevestigator:Q38833
            GO:GO:0046408 GO:GO:0030494 TIGRFAMs:TIGR02056 TIGRFAMs:TIGR01476
            Uniprot:Q38833
        Length = 387

 Score = 162 (62.1 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 57/197 (28%), Positives = 87/197 (44%)

Query:    77 CGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLS----VQSAWFLVIF-FAVTGLLIV-AF 130
             C  GY   IN  YD  ID +N+PY PI +G +S    +   W L++    + G+L V A 
Sbjct:   146 CLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEPEVITQVWVLLLGGLGIAGILDVWAG 205

Query:   131 NFGPFITSLYCLGLFLGTIYSVPPFRMKRFA-VAAFLIIATVRGFLLNFGVYYATRAALG 189
             +  P +  L   G  L  IYS PP ++K+   V  F + A+          ++A +A  G
Sbjct:   206 HTTPTVFYLALGGSLLSYIYSAPPLKLKQNGWVGNFALGASYISL-----PWWAGQALFG 260

Query:   190 LSFEWNAPVAFITAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKNIAFLGSGLL 249
                     V  +T   ++  L IA+  D   VEGDR   + +L    G +   ++  G +
Sbjct:   261 TL---TPDVVVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGTETAKWICVGAI 317

Query:   250 LLNY--VAAILAAIYMP 264
              +    VA  L A   P
Sbjct:   318 DITQLSVAGYLLASGKP 334


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.330   0.143   0.444    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      309       296   0.00093  115 3  11 21  0.40    33
                                                     33  0.44    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  622 (66 KB)
  Total size of DFA:  196 KB (2110 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.93u 0.20s 20.13t   Elapsed:  00:00:01
  Total cpu time:  19.93u 0.21s 20.14t   Elapsed:  00:00:01
  Start:  Fri May 10 05:15:17 2013   End:  Fri May 10 05:15:18 2013

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