Query 021653
Match_columns 309
No_of_seqs 226 out of 2369
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 04:38:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021653.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021653hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 9.2E-34 2E-38 273.7 23.5 278 17-304 32-312 (571)
2 COG3104 PTR2 Dipeptide/tripept 99.9 4E-26 8.6E-31 212.0 15.7 193 16-232 15-211 (498)
3 PRK10207 dipeptide/tripeptide 99.9 5E-24 1.1E-28 204.9 22.4 190 17-231 9-198 (489)
4 TIGR00924 yjdL_sub1_fam amino 99.9 2.3E-22 4.9E-27 192.9 21.6 189 18-231 6-196 (475)
5 TIGR00926 2A1704 Peptide:H+ sy 99.9 3.8E-22 8.1E-27 196.4 21.6 203 36-255 1-210 (654)
6 PRK15462 dipeptide/tripeptide 99.9 1.7E-21 3.7E-26 185.9 22.0 186 20-230 7-192 (493)
7 PRK09584 tppB putative tripept 99.9 4E-21 8.6E-26 185.4 22.8 185 19-228 18-202 (500)
8 PRK10213 nepI ribonucleoside t 99.8 2.7E-17 5.9E-22 154.2 22.4 190 2-223 2-191 (394)
9 KOG1330 Sugar transporter/spin 99.8 1E-18 2.2E-23 160.9 9.7 174 20-223 31-205 (493)
10 TIGR02332 HpaX 4-hydroxyphenyl 99.8 4.2E-17 9.2E-22 153.8 21.0 177 18-224 4-186 (412)
11 PRK10054 putative transporter; 99.8 9.6E-17 2.1E-21 150.5 22.9 173 22-224 7-179 (395)
12 PRK03545 putative arabinose tr 99.8 7E-17 1.5E-21 150.9 21.9 176 20-225 7-182 (390)
13 PRK15403 multidrug efflux syst 99.8 1.3E-16 2.7E-21 150.6 22.8 152 49-229 42-193 (413)
14 PF07690 MFS_1: Major Facilita 99.7 9.9E-17 2.2E-21 146.4 19.1 165 29-222 3-167 (352)
15 TIGR00903 2A0129 major facilit 99.7 2.9E-16 6.3E-21 146.0 21.5 152 44-225 12-163 (368)
16 TIGR00710 efflux_Bcr_CflA drug 99.7 4.8E-16 1E-20 144.0 22.5 177 22-228 5-181 (385)
17 PRK14995 methyl viologen resis 99.7 2.6E-16 5.7E-21 151.8 21.4 179 21-228 5-183 (495)
18 COG2814 AraJ Arabinose efflux 99.7 6.7E-16 1.5E-20 142.2 22.7 181 18-228 9-189 (394)
19 TIGR00891 2A0112 putative sial 99.7 4.5E-16 9.8E-21 144.9 22.0 174 17-220 7-182 (405)
20 PRK11646 multidrug resistance 99.7 7.1E-16 1.5E-20 144.9 22.7 168 25-222 13-180 (400)
21 PRK12382 putative transporter; 99.7 8.6E-16 1.9E-20 143.4 22.9 171 24-215 17-187 (392)
22 PRK10642 proline/glycine betai 99.7 6.6E-16 1.4E-20 148.8 21.7 187 20-232 248-437 (490)
23 TIGR01299 synapt_SV2 synaptic 99.7 4.8E-16 1E-20 155.2 21.1 166 42-236 186-366 (742)
24 PRK15402 multidrug efflux syst 99.7 1.2E-15 2.5E-20 143.3 22.6 152 48-228 38-189 (406)
25 PRK11551 putative 3-hydroxyphe 99.7 8.2E-16 1.8E-20 144.1 21.4 174 18-221 11-184 (406)
26 TIGR00900 2A0121 H+ Antiporter 99.7 1.2E-15 2.7E-20 139.7 22.1 173 27-224 4-176 (365)
27 PRK10504 putative transporter; 99.7 1.5E-15 3.4E-20 145.2 23.5 177 23-229 11-187 (471)
28 PRK10091 MFS transport protein 99.7 9.3E-16 2E-20 143.0 20.3 177 23-229 4-180 (382)
29 PRK05122 major facilitator sup 99.7 1.7E-15 3.7E-20 141.7 21.9 179 20-219 13-191 (399)
30 PRK10406 alpha-ketoglutarate t 99.7 1.6E-15 3.4E-20 143.8 21.7 169 29-219 29-211 (432)
31 PRK11652 emrD multidrug resist 99.7 2.1E-15 4.4E-20 141.0 21.9 173 19-221 5-177 (394)
32 TIGR00895 2A0115 benzoate tran 99.7 1.4E-15 3E-20 141.0 20.6 174 19-222 14-187 (398)
33 PRK12307 putative sialic acid 99.7 1.1E-15 2.4E-20 144.1 20.2 168 18-215 14-181 (426)
34 PRK11663 regulatory protein Uh 99.7 1.3E-15 2.9E-20 144.5 20.5 164 27-220 28-191 (434)
35 TIGR00711 efflux_EmrB drug res 99.7 1.2E-15 2.7E-20 146.0 19.3 172 25-226 5-176 (485)
36 PF00854 PTR2: POT family; In 99.7 1.1E-16 2.3E-21 149.1 10.9 155 89-259 1-157 (372)
37 TIGR00890 2A0111 Oxalate/Forma 99.7 2.3E-15 5E-20 138.4 19.5 151 43-223 23-173 (377)
38 TIGR00893 2A0114 d-galactonate 99.7 1.5E-15 3.3E-20 139.9 18.0 152 44-224 15-166 (399)
39 PRK03893 putative sialic acid 99.7 5.5E-15 1.2E-19 142.2 21.7 169 18-216 16-184 (496)
40 TIGR00886 2A0108 nitrite extru 99.7 7.2E-15 1.6E-19 135.4 21.1 164 24-216 3-177 (366)
41 PRK03699 putative transporter; 99.7 1E-14 2.2E-19 136.6 22.2 175 19-223 4-179 (394)
42 PRK09705 cynX putative cyanate 99.7 5.4E-15 1.2E-19 138.5 19.9 151 39-220 26-177 (393)
43 TIGR00887 2A0109 phosphate:H+ 99.7 6.4E-15 1.4E-19 142.4 20.9 190 20-233 14-233 (502)
44 TIGR00879 SP MFS transporter, 99.7 2.3E-15 4.9E-20 142.6 17.3 140 55-220 68-210 (481)
45 PRK11043 putative transporter; 99.7 1.1E-14 2.3E-19 136.5 21.5 162 34-224 15-178 (401)
46 PLN00028 nitrate transmembrane 99.7 1.1E-14 2.3E-19 140.0 21.7 175 19-224 33-216 (476)
47 KOG0254 Predicted transporter 99.7 5.2E-15 1.1E-19 143.5 19.7 149 59-236 90-241 (513)
48 PRK10133 L-fucose transporter; 99.7 2E-14 4.3E-19 136.7 23.3 153 20-199 24-176 (438)
49 PRK10473 multidrug efflux syst 99.7 1.6E-14 3.6E-19 134.8 22.3 163 30-222 11-173 (392)
50 PRK09874 drug efflux system pr 99.7 2E-14 4.4E-19 134.5 22.7 174 20-224 11-190 (408)
51 PRK11102 bicyclomycin/multidru 99.7 1.1E-14 2.4E-19 135.0 20.3 154 42-225 11-164 (377)
52 PRK10077 xylE D-xylose transpo 99.7 7.2E-15 1.6E-19 140.6 18.7 150 54-221 51-209 (479)
53 PRK09952 shikimate transporter 99.7 1.1E-14 2.3E-19 138.5 19.6 177 20-218 20-211 (438)
54 TIGR00899 2A0120 sugar efflux 99.6 1.6E-14 3.6E-19 133.3 20.4 168 29-225 4-174 (375)
55 TIGR00897 2A0118 polyol permea 99.6 4.9E-14 1.1E-18 132.4 23.1 171 19-215 10-181 (402)
56 COG2271 UhpC Sugar phosphate p 99.6 1.9E-15 4.1E-20 138.3 12.4 170 25-223 28-202 (448)
57 PRK03633 putative MFS family t 99.6 4.2E-14 9.2E-19 131.7 22.0 158 22-209 6-163 (381)
58 cd06174 MFS The Major Facilita 99.6 2.7E-14 5.8E-19 129.7 19.5 166 27-222 4-169 (352)
59 PRK10642 proline/glycine betai 99.6 2.2E-14 4.8E-19 138.2 19.9 176 21-218 15-204 (490)
60 PRK09556 uhpT sugar phosphate 99.6 3.6E-15 7.9E-20 142.8 14.1 153 46-222 52-207 (467)
61 TIGR00881 2A0104 phosphoglycer 99.6 4.8E-15 1E-19 136.4 14.3 150 45-223 17-167 (379)
62 TIGR00885 fucP L-fucose:H+ sym 99.6 6.8E-14 1.5E-18 131.9 22.4 173 24-223 5-203 (410)
63 PRK11195 lysophospholipid tran 99.6 8.1E-14 1.7E-18 130.7 22.0 162 24-219 5-166 (393)
64 TIGR00894 2A0114euk Na(+)-depe 99.6 2E-14 4.3E-19 137.4 17.8 145 52-223 70-215 (465)
65 PRK10489 enterobactin exporter 99.6 2.3E-14 4.9E-19 135.1 16.6 170 29-223 24-193 (417)
66 KOG0569 Permease of the major 99.6 3E-14 6.5E-19 134.9 16.1 157 60-242 62-223 (485)
67 PRK15011 sugar efflux transpor 99.6 2.8E-13 6E-18 126.9 22.6 174 21-224 215-388 (393)
68 PRK11273 glpT sn-glycerol-3-ph 99.6 9.2E-14 2E-18 132.6 19.4 153 44-222 50-203 (452)
69 TIGR00805 oat sodium-independe 99.6 1.6E-14 3.5E-19 143.0 14.6 196 21-223 31-277 (633)
70 TIGR00898 2A0119 cation transp 99.6 4.4E-14 9.6E-19 136.3 17.1 152 48-231 114-270 (505)
71 PRK15075 citrate-proton sympor 99.6 1.3E-13 2.7E-18 130.9 19.9 173 20-214 13-199 (434)
72 TIGR00892 2A0113 monocarboxyla 99.6 1.2E-13 2.7E-18 131.9 19.7 148 47-224 43-191 (455)
73 PRK15034 nitrate/nitrite trans 99.6 2.8E-13 6.1E-18 128.5 21.5 179 22-226 34-231 (462)
74 TIGR00806 rfc RFC reduced fola 99.6 2.9E-13 6.2E-18 127.2 20.9 171 19-222 23-198 (511)
75 PRK15011 sugar efflux transpor 99.6 6.1E-13 1.3E-17 124.6 22.8 174 23-225 16-192 (393)
76 PRK09556 uhpT sugar phosphate 99.6 2.8E-13 6E-18 129.8 20.1 175 23-224 259-446 (467)
77 COG2271 UhpC Sugar phosphate p 99.6 1.2E-13 2.6E-18 126.6 16.2 179 22-226 252-433 (448)
78 TIGR00712 glpT glycerol-3-phos 99.6 1.1E-13 2.4E-18 131.5 16.5 154 45-224 49-203 (438)
79 TIGR00882 2A0105 oligosacchari 99.6 5.7E-13 1.2E-17 124.7 20.5 178 23-224 3-180 (396)
80 PRK03699 putative transporter; 99.5 6.7E-13 1.5E-17 124.3 20.4 170 23-222 206-375 (394)
81 KOG0255 Synaptic vesicle trans 99.5 1.3E-13 2.8E-18 133.8 16.0 156 51-238 111-268 (521)
82 TIGR00896 CynX cyanate transpo 99.5 2E-13 4.4E-18 125.7 16.4 147 43-220 20-168 (355)
83 PRK05122 major facilitator sup 99.5 8.5E-13 1.8E-17 123.5 20.2 167 33-231 227-393 (399)
84 cd06174 MFS The Major Facilita 99.5 1.6E-12 3.4E-17 118.1 20.8 168 27-223 180-348 (352)
85 PRK09952 shikimate transporter 99.5 2.3E-12 5E-17 122.5 22.1 179 22-225 250-431 (438)
86 KOG2532 Permease of the major 99.5 6.4E-13 1.4E-17 126.6 17.6 148 52-226 67-215 (466)
87 TIGR00899 2A0120 sugar efflux 99.5 2.6E-12 5.7E-17 118.6 21.1 156 38-223 215-370 (375)
88 PRK09528 lacY galactoside perm 99.5 1.2E-12 2.6E-17 123.6 18.8 181 22-226 10-190 (420)
89 PRK08633 2-acyl-glycerophospho 99.5 2.7E-12 5.9E-17 135.4 22.7 154 23-202 10-165 (1146)
90 TIGR00890 2A0111 Oxalate/Forma 99.5 1.6E-12 3.5E-17 119.4 18.4 168 25-220 208-375 (377)
91 TIGR00883 2A0106 metabolite-pr 99.5 9.5E-13 2E-17 121.7 16.8 168 23-216 220-390 (394)
92 COG2223 NarK Nitrate/nitrite t 99.5 2E-12 4.2E-17 118.6 18.3 184 18-230 10-196 (417)
93 PRK11010 ampG muropeptide tran 99.5 1.1E-11 2.5E-16 119.5 23.8 175 20-222 10-190 (491)
94 KOG3764 Vesicular amine transp 99.5 2.5E-13 5.4E-18 123.4 10.9 165 52-244 100-267 (464)
95 TIGR01299 synapt_SV2 synaptic 99.5 4.2E-12 9.1E-17 127.1 20.8 131 64-224 601-731 (742)
96 PRK11902 ampG muropeptide tran 99.5 1.2E-11 2.6E-16 116.1 22.8 166 29-222 6-177 (402)
97 PTZ00207 hypothetical protein; 99.5 1.1E-11 2.4E-16 120.8 22.9 175 19-222 25-200 (591)
98 PRK09705 cynX putative cyanate 99.5 1.1E-11 2.4E-16 116.2 22.2 175 24-228 207-382 (393)
99 TIGR00901 2A0125 AmpG-related 99.5 6.4E-12 1.4E-16 115.7 20.3 154 44-224 9-175 (356)
100 PRK03893 putative sialic acid 99.5 3.4E-12 7.4E-17 122.8 19.0 150 40-216 293-442 (496)
101 PRK12382 putative transporter; 99.4 6.7E-12 1.5E-16 117.2 19.0 160 34-225 228-387 (392)
102 PF00083 Sugar_tr: Sugar (and 99.4 6.3E-16 1.4E-20 146.9 -8.8 157 58-240 46-207 (451)
103 TIGR00893 2A0114 d-galactonate 99.4 1.1E-11 2.4E-16 114.1 19.6 179 22-223 215-395 (399)
104 COG0738 FucP Fucose permease [ 99.4 1.8E-11 3.8E-16 111.8 20.2 137 39-201 29-165 (422)
105 TIGR00889 2A0110 nucleoside tr 99.4 8.9E-12 1.9E-16 117.8 19.1 173 29-227 215-402 (418)
106 TIGR00880 2_A_01_02 Multidrug 99.4 1.4E-12 3E-17 102.6 11.5 131 66-225 6-136 (141)
107 PRK09874 drug efflux system pr 99.4 1.1E-11 2.5E-16 115.9 19.6 163 34-225 231-396 (408)
108 PRK03545 putative arabinose tr 99.4 3.1E-11 6.8E-16 112.7 22.5 170 27-226 210-379 (390)
109 PRK11273 glpT sn-glycerol-3-ph 99.4 9.8E-12 2.1E-16 118.6 19.4 176 22-223 253-431 (452)
110 TIGR00891 2A0112 putative sial 99.4 6.7E-12 1.4E-16 116.8 17.8 157 27-211 243-400 (405)
111 TIGR00902 2A0127 phenyl propri 99.4 1.5E-11 3.3E-16 114.7 20.0 157 27-217 9-169 (382)
112 PRK11551 putative 3-hydroxyphe 99.4 1.8E-11 4E-16 114.6 20.6 164 29-222 227-391 (406)
113 PRK10489 enterobactin exporter 99.4 1.4E-11 3.1E-16 116.0 19.6 160 38-226 239-398 (417)
114 TIGR00792 gph sugar (Glycoside 99.4 6.7E-12 1.4E-16 118.7 17.1 174 32-226 9-193 (437)
115 TIGR00892 2A0113 monocarboxyla 99.4 1.1E-11 2.3E-16 118.5 18.7 174 23-225 242-419 (455)
116 PRK03633 putative MFS family t 99.4 3.8E-11 8.2E-16 111.9 21.8 154 38-224 216-369 (381)
117 PRK09528 lacY galactoside perm 99.4 5.9E-12 1.3E-16 118.8 16.2 158 38-224 239-400 (420)
118 PRK06814 acylglycerophosphoeth 99.4 2.2E-11 4.9E-16 128.6 22.1 141 51-220 44-188 (1140)
119 PRK11663 regulatory protein Uh 99.4 2.3E-11 5E-16 115.5 20.0 177 24-226 245-423 (434)
120 PF06609 TRI12: Fungal trichot 99.4 1.3E-11 2.8E-16 119.9 18.2 149 43-222 64-212 (599)
121 TIGR00883 2A0106 metabolite-pr 99.4 1.4E-11 3.1E-16 113.8 17.7 157 44-221 14-185 (394)
122 PRK15075 citrate-proton sympor 99.4 3.5E-11 7.5E-16 114.2 20.1 152 29-206 245-398 (434)
123 PRK11128 putative 3-phenylprop 99.4 3E-11 6.6E-16 112.6 18.8 152 35-220 17-172 (382)
124 TIGR00902 2A0127 phenyl propri 99.4 8.8E-11 1.9E-15 109.6 21.9 169 22-222 205-374 (382)
125 TIGR00897 2A0118 polyol permea 99.4 8.4E-11 1.8E-15 110.4 21.8 176 23-225 223-399 (402)
126 PF11700 ATG22: Vacuole efflux 99.4 7.2E-11 1.6E-15 113.1 21.4 185 21-226 280-467 (477)
127 PRK11010 ampG muropeptide tran 99.4 1.7E-10 3.7E-15 111.4 22.5 172 31-227 231-403 (491)
128 TIGR00879 SP MFS transporter, 99.4 6.8E-11 1.5E-15 112.0 19.0 163 44-225 305-468 (481)
129 PLN00028 nitrate transmembrane 99.4 3.7E-11 8.1E-16 115.5 17.4 173 25-226 255-432 (476)
130 TIGR01301 GPH_sucrose GPH fami 99.3 1.3E-10 2.7E-15 111.1 20.6 194 25-228 7-219 (477)
131 PRK10406 alpha-ketoglutarate t 99.3 2E-10 4.4E-15 108.9 21.6 167 32-224 253-421 (432)
132 TIGR01272 gluP glucose/galacto 99.3 2.6E-10 5.6E-15 103.6 19.2 162 23-216 141-304 (310)
133 TIGR02332 HpaX 4-hydroxyphenyl 99.3 1.4E-10 3E-15 109.5 17.0 164 23-215 243-409 (412)
134 PRK10504 putative transporter; 99.3 3.5E-10 7.7E-15 108.2 20.0 156 24-205 263-418 (471)
135 TIGR00900 2A0121 H+ Antiporter 99.3 2.8E-10 6.1E-15 104.1 18.4 154 23-204 211-365 (365)
136 COG2223 NarK Nitrate/nitrite t 99.3 1.1E-10 2.3E-15 107.3 15.0 187 21-230 217-404 (417)
137 TIGR00712 glpT glycerol-3-phos 99.3 2.2E-10 4.7E-15 108.9 17.5 175 24-225 253-431 (438)
138 PRK15402 multidrug efflux syst 99.3 1.6E-09 3.5E-14 101.7 22.9 168 24-216 217-384 (406)
139 TIGR00792 gph sugar (Glycoside 99.3 6.2E-10 1.3E-14 105.3 20.0 161 23-206 223-384 (437)
140 PRK11128 putative 3-phenylprop 99.3 1.1E-09 2.5E-14 102.0 21.4 166 23-220 206-372 (382)
141 PF05977 MFS_3: Transmembrane 99.3 2.8E-10 6.1E-15 110.2 17.5 168 27-223 223-390 (524)
142 KOG4686 Predicted sugar transp 99.3 3.4E-10 7.3E-15 99.0 15.9 168 18-216 260-431 (459)
143 PF05977 MFS_3: Transmembrane 99.2 1.4E-09 3E-14 105.4 21.8 178 25-227 13-190 (524)
144 TIGR00711 efflux_EmrB drug res 99.2 3.7E-10 8E-15 108.1 17.2 156 23-203 256-411 (485)
145 KOG2533 Permease of the major 99.2 2.5E-10 5.5E-15 109.3 15.8 147 50-225 73-225 (495)
146 COG2814 AraJ Arabinose efflux 99.2 1.7E-09 3.8E-14 99.9 20.5 178 22-229 211-388 (394)
147 TIGR00895 2A0115 benzoate tran 99.2 6.4E-10 1.4E-14 103.0 17.9 147 23-199 251-397 (398)
148 TIGR00788 fbt folate/biopterin 99.2 1.1E-09 2.4E-14 105.1 20.0 168 25-220 29-202 (468)
149 KOG2615 Permease of the major 99.2 1.7E-10 3.6E-15 104.6 13.2 116 56-201 66-181 (451)
150 TIGR00881 2A0104 phosphoglycer 99.2 5.3E-10 1.1E-14 102.7 17.0 161 23-209 217-379 (379)
151 TIGR00894 2A0114euk Na(+)-depe 99.2 8.6E-10 1.9E-14 105.5 19.0 178 21-225 260-448 (465)
152 PRK10077 xylE D-xylose transpo 99.2 2.6E-09 5.6E-14 102.3 22.3 153 48-225 296-455 (479)
153 PRK12307 putative sialic acid 99.2 1.4E-09 3E-14 102.5 20.1 142 39-208 248-389 (426)
154 PRK09669 putative symporter Ya 99.2 5E-10 1.1E-14 106.6 16.9 170 30-220 17-197 (444)
155 KOG2504 Monocarboxylate transp 99.2 2.7E-10 5.8E-15 109.9 15.0 174 25-228 45-222 (509)
156 TIGR00882 2A0105 oligosacchari 99.2 9.7E-10 2.1E-14 102.9 18.5 165 29-222 222-390 (396)
157 PRK10091 MFS transport protein 99.2 2.3E-09 5E-14 100.0 20.8 168 25-222 202-371 (382)
158 PRK14995 methyl viologen resis 99.2 8.4E-10 1.8E-14 106.6 18.1 152 24-201 261-412 (495)
159 TIGR00710 efflux_Bcr_CflA drug 99.2 3.9E-09 8.4E-14 97.7 21.3 159 28-211 212-370 (385)
160 TIGR00896 CynX cyanate transpo 99.2 2E-09 4.3E-14 99.1 19.1 153 23-204 198-350 (355)
161 PRK11902 ampG muropeptide tran 99.2 7.6E-09 1.7E-13 97.1 22.2 153 44-225 231-388 (402)
162 TIGR02718 sider_RhtX_FptX side 99.2 5.8E-09 1.3E-13 97.4 21.2 174 25-221 211-385 (390)
163 PRK10133 L-fucose transporter; 99.2 3E-09 6.6E-14 101.2 19.6 161 29-221 265-427 (438)
164 PRK09848 glucuronide transport 99.2 2E-09 4.4E-14 102.5 17.9 162 23-205 229-391 (448)
165 PRK10213 nepI ribonucleoside t 99.2 1E-08 2.2E-13 96.2 22.4 165 24-219 218-383 (394)
166 PRK15034 nitrate/nitrite trans 99.2 3.8E-09 8.2E-14 100.5 19.5 185 23-226 253-453 (462)
167 PRK08633 2-acyl-glycerophospho 99.2 2E-09 4.3E-14 113.8 19.6 162 25-215 235-398 (1146)
168 TIGR00889 2A0110 nucleoside tr 99.1 8.4E-09 1.8E-13 97.6 21.3 156 29-220 9-173 (418)
169 TIGR00887 2A0109 phosphate:H+ 99.1 1.6E-09 3.5E-14 104.8 16.7 165 31-221 297-483 (502)
170 PF13347 MFS_2: MFS/sugar tran 99.1 2.7E-09 5.9E-14 101.1 17.7 163 22-206 225-388 (428)
171 PRK10429 melibiose:sodium symp 99.1 2.8E-09 6.1E-14 102.4 17.8 169 30-220 14-194 (473)
172 COG2270 Permeases of the major 99.1 1.9E-09 4E-14 99.4 15.1 172 23-223 253-425 (438)
173 KOG0253 Synaptic vesicle trans 99.1 3.9E-09 8.5E-14 95.5 16.3 168 40-238 95-264 (528)
174 PRK11646 multidrug resistance 99.1 6.6E-09 1.4E-13 97.7 18.4 153 41-222 227-383 (400)
175 TIGR02718 sider_RhtX_FptX side 99.1 2.1E-08 4.5E-13 93.7 21.6 176 25-225 4-182 (390)
176 PRK06814 acylglycerophosphoeth 99.1 3.1E-09 6.8E-14 112.4 17.9 182 23-215 226-410 (1140)
177 PRK10429 melibiose:sodium symp 99.1 6.6E-09 1.4E-13 99.9 18.5 165 22-205 231-396 (473)
178 KOG0252 Inorganic phosphate tr 99.1 4E-10 8.7E-15 104.4 9.3 176 20-217 36-236 (538)
179 PF13347 MFS_2: MFS/sugar tran 99.1 5.2E-10 1.1E-14 106.0 10.1 178 32-229 11-200 (428)
180 PRK10054 putative transporter; 99.1 5.8E-09 1.2E-13 97.9 17.0 172 24-224 208-381 (395)
181 PRK11462 putative transporter; 99.1 1.7E-08 3.8E-13 96.6 19.8 171 29-220 16-197 (460)
182 PF05631 DUF791: Protein of un 99.1 3.4E-08 7.4E-13 89.7 20.3 151 49-224 60-213 (354)
183 TIGR00901 2A0125 AmpG-related 99.1 7.7E-09 1.7E-13 95.2 16.5 144 24-186 211-355 (356)
184 COG2807 CynX Cyanate permease 99.1 2.4E-08 5.3E-13 90.3 18.9 155 44-229 33-188 (395)
185 PRK09848 glucuronide transport 99.0 2.8E-08 6E-13 94.7 19.0 149 29-197 15-172 (448)
186 TIGR00898 2A0119 cation transp 99.0 1.1E-08 2.5E-13 98.7 15.8 141 51-223 351-491 (505)
187 PRK11195 lysophospholipid tran 99.0 7E-08 1.5E-12 90.5 20.3 154 37-220 220-373 (393)
188 PF07690 MFS_1: Major Facilita 99.0 1.2E-08 2.6E-13 92.9 14.8 141 27-193 211-352 (352)
189 COG2807 CynX Cyanate permease 99.0 9.2E-08 2E-12 86.6 19.8 169 22-219 208-377 (395)
190 TIGR00903 2A0129 major facilit 99.0 4.8E-08 1E-12 90.9 18.5 165 22-222 192-360 (368)
191 PRK11102 bicyclomycin/multidru 99.0 1.5E-07 3.2E-12 87.2 21.7 142 29-196 201-343 (377)
192 KOG2504 Monocarboxylate transp 99.0 1.8E-08 3.9E-13 97.3 15.1 176 22-227 298-476 (509)
193 PRK11043 putative transporter; 98.9 3.8E-07 8.2E-12 85.4 22.7 144 34-203 215-358 (401)
194 PRK09669 putative symporter Ya 98.9 1.3E-07 2.8E-12 90.1 19.2 125 60-205 266-391 (444)
195 PRK10473 multidrug efflux syst 98.9 3.2E-07 7E-12 85.6 21.2 69 41-110 222-290 (392)
196 COG2211 MelB Na+/melibiose sym 98.9 9.3E-08 2E-12 90.4 17.1 170 29-219 19-199 (467)
197 KOG0569 Permease of the major 98.8 6.6E-07 1.4E-11 85.3 20.7 190 21-231 268-458 (485)
198 TIGR00885 fucP L-fucose:H+ sym 98.8 3.6E-07 7.8E-12 86.3 18.7 158 30-219 240-404 (410)
199 KOG2325 Predicted transporter/ 98.8 1.1E-07 2.4E-12 90.1 14.8 190 14-228 26-230 (488)
200 COG2211 MelB Na+/melibiose sym 98.8 4.8E-07 1E-11 85.6 18.8 161 23-204 237-398 (467)
201 TIGR00886 2A0108 nitrite extru 98.8 6.3E-08 1.4E-12 89.1 12.8 139 24-188 227-365 (366)
202 PRK11652 emrD multidrug resist 98.8 1.4E-06 3.1E-11 81.3 21.7 138 42-206 227-364 (394)
203 PRK11462 putative transporter; 98.8 1.6E-06 3.4E-11 83.2 20.8 154 30-205 236-390 (460)
204 KOG2532 Permease of the major 98.7 3.1E-07 6.8E-12 87.8 15.3 178 22-225 258-445 (466)
205 PF01306 LacY_symp: LacY proto 98.7 1.8E-06 3.9E-11 80.8 18.9 178 21-227 219-400 (412)
206 TIGR00924 yjdL_sub1_fam amino 98.7 7.9E-07 1.7E-11 85.6 17.0 182 28-228 278-469 (475)
207 KOG0253 Synaptic vesicle trans 98.7 5.8E-07 1.3E-11 81.7 14.0 170 22-222 326-514 (528)
208 PF06813 Nodulin-like: Nodulin 98.7 2.2E-06 4.8E-11 75.1 17.4 127 45-195 24-150 (250)
209 PF03825 Nuc_H_symport: Nucleo 98.6 6.6E-06 1.4E-10 77.4 20.7 176 26-225 211-393 (400)
210 PF03825 Nuc_H_symport: Nucleo 98.6 1.2E-05 2.7E-10 75.6 22.2 113 29-164 9-121 (400)
211 PRK15403 multidrug efflux syst 98.6 6.9E-06 1.5E-10 77.6 20.5 170 23-218 219-388 (413)
212 PF03137 OATP: Organic Anion T 98.6 7E-09 1.5E-13 100.9 -0.9 184 36-226 16-249 (539)
213 PF01306 LacY_symp: LacY proto 98.6 7.5E-07 1.6E-11 83.3 12.2 178 23-226 8-187 (412)
214 PF03209 PUCC: PUCC protein; 98.6 8.2E-06 1.8E-10 75.5 18.7 157 43-224 229-395 (403)
215 COG0477 ProP Permeases of the 98.5 1E-05 2.2E-10 70.7 18.4 140 51-216 30-174 (338)
216 PF03092 BT1: BT1 family; Int 98.4 9E-06 1.9E-10 77.4 16.2 156 44-222 11-170 (433)
217 KOG2816 Predicted transporter 98.4 1.2E-05 2.6E-10 76.8 16.4 171 27-229 23-201 (463)
218 COG0738 FucP Fucose permease [ 98.4 1.3E-05 2.8E-10 73.9 15.8 140 40-211 254-393 (422)
219 KOG2563 Permease of the major 98.4 1.9E-05 4.2E-10 73.7 17.0 134 45-200 67-200 (480)
220 PRK10207 dipeptide/tripeptide 98.4 1.3E-05 2.8E-10 77.5 15.8 146 34-199 281-438 (489)
221 KOG2533 Permease of the major 98.4 4.6E-06 9.9E-11 80.3 12.5 165 23-214 274-443 (495)
222 PRK09584 tppB putative tripept 98.3 2.8E-05 6E-10 75.4 17.4 176 33-228 283-480 (500)
223 PF03209 PUCC: PUCC protein; 98.3 5.4E-05 1.2E-09 70.2 18.1 141 50-204 7-153 (403)
224 KOG3626 Organic anion transpor 98.2 1.9E-05 4.1E-10 78.3 13.4 200 22-228 96-344 (735)
225 TIGR00788 fbt folate/biopterin 98.2 6.3E-06 1.4E-10 79.2 9.6 146 50-215 280-431 (468)
226 KOG3764 Vesicular amine transp 98.2 4.8E-06 1E-10 76.5 7.8 163 34-219 282-446 (464)
227 TIGR01301 GPH_sucrose GPH fami 98.1 0.00043 9.3E-09 66.5 19.9 205 18-229 254-473 (477)
228 PF12832 MFS_1_like: MFS_1 lik 98.1 4.4E-05 9.6E-10 54.4 9.6 61 37-99 15-75 (77)
229 KOG0254 Predicted transporter 98.0 0.00026 5.7E-09 68.8 16.9 90 19-110 291-380 (513)
230 PF11700 ATG22: Vacuole efflux 98.0 0.0013 2.8E-08 63.4 21.1 137 61-218 73-238 (477)
231 TIGR00805 oat sodium-independe 98.0 0.00022 4.9E-09 71.1 15.6 174 22-202 330-581 (633)
232 PF05978 UNC-93: Ion channel r 97.8 0.0017 3.6E-08 52.9 14.8 104 63-196 42-145 (156)
233 KOG3762 Predicted transporter 97.8 0.00018 4E-09 68.6 10.1 149 51-228 399-548 (618)
234 PF00083 Sugar_tr: Sugar (and 97.8 7.4E-08 1.6E-12 91.6 -13.0 183 23-228 253-437 (451)
235 KOG4686 Predicted sugar transp 97.7 2.3E-06 4.9E-11 75.4 -3.3 136 43-203 64-199 (459)
236 PF06609 TRI12: Fungal trichot 97.6 0.0017 3.6E-08 63.9 15.1 150 21-197 309-462 (599)
237 KOG0252 Inorganic phosphate tr 97.6 0.00011 2.3E-09 69.0 6.4 169 30-223 312-494 (538)
238 TIGR01272 gluP glucose/galacto 97.6 0.00031 6.7E-09 63.8 9.4 84 133-222 9-108 (310)
239 PTZ00207 hypothetical protein; 97.6 0.001 2.2E-08 65.5 13.1 177 22-230 353-555 (591)
240 PRK03612 spermidine synthase; 97.6 0.02 4.4E-07 55.8 21.3 152 29-206 21-176 (521)
241 KOG4332 Predicted sugar transp 97.4 0.00023 5.1E-09 62.4 5.5 96 45-164 59-155 (454)
242 COG2270 Permeases of the major 97.4 0.006 1.3E-07 56.9 14.3 128 42-195 35-170 (438)
243 KOG0255 Synaptic vesicle trans 97.4 0.029 6.2E-07 54.6 19.8 122 51-201 346-467 (521)
244 PRK15462 dipeptide/tripeptide 97.3 0.024 5.3E-07 54.8 18.0 120 60-199 310-437 (493)
245 KOG2563 Permease of the major 97.3 0.0019 4.1E-08 60.6 9.8 155 52-232 295-455 (480)
246 KOG0637 Sucrose transporter an 97.3 0.00029 6.2E-09 66.1 4.2 167 22-199 32-202 (498)
247 PF06779 DUF1228: Protein of u 97.2 0.006 1.3E-07 44.1 10.1 73 33-110 6-78 (85)
248 KOG2615 Permease of the major 97.2 0.0056 1.2E-07 56.5 11.8 151 23-201 261-413 (451)
249 PF01770 Folate_carrier: Reduc 97.1 0.077 1.7E-06 49.9 18.6 152 41-222 22-177 (412)
250 KOG2816 Predicted transporter 97.0 0.012 2.6E-07 56.5 12.9 127 44-199 263-389 (463)
251 PF06963 FPN1: Ferroportin1 (F 97.0 0.065 1.4E-06 50.9 17.5 143 33-196 269-412 (432)
252 KOG3626 Organic anion transpor 96.7 0.031 6.7E-07 56.0 13.2 83 22-104 392-476 (735)
253 TIGR00769 AAA ADP/ATP carrier 96.5 0.66 1.4E-05 44.7 20.6 164 21-200 6-189 (472)
254 PF03137 OATP: Organic Anion T 96.2 0.0013 2.8E-08 64.4 0.0 174 23-202 306-514 (539)
255 KOG2325 Predicted transporter/ 96.0 0.014 3.1E-07 55.8 6.0 197 18-220 258-468 (488)
256 COG3104 PTR2 Dipeptide/tripept 95.8 0.33 7.2E-06 46.5 14.1 142 63-223 329-483 (498)
257 KOG3762 Predicted transporter 95.5 0.036 7.8E-07 53.4 6.5 66 40-107 29-95 (618)
258 TIGR00926 2A1704 Peptide:H+ sy 95.5 0.31 6.8E-06 48.9 13.5 183 54-254 16-206 (654)
259 KOG3098 Uncharacterized conser 95.4 0.34 7.4E-06 46.3 12.9 99 64-192 56-154 (461)
260 KOG3098 Uncharacterized conser 95.4 0.96 2.1E-05 43.3 15.9 115 67-192 288-404 (461)
261 KOG3574 Acetyl-CoA transporter 95.4 0.54 1.2E-05 43.8 13.4 158 17-195 26-188 (510)
262 PF02487 CLN3: CLN3 protein; 93.9 0.58 1.3E-05 44.0 10.4 123 68-225 69-193 (402)
263 PF06963 FPN1: Ferroportin1 (F 93.9 6.3 0.00014 37.6 19.0 187 24-222 4-195 (432)
264 KOG1330 Sugar transporter/spin 93.7 0.32 6.9E-06 46.2 8.2 135 51-207 276-418 (493)
265 KOG3097 Predicted membrane pro 93.7 1.4 3.1E-05 40.2 11.8 147 18-195 25-180 (390)
266 KOG4332 Predicted sugar transp 92.7 2.3 4.9E-05 38.0 11.3 140 61-222 285-426 (454)
267 PF02487 CLN3: CLN3 protein; 89.8 10 0.00023 35.7 13.4 63 133-201 334-396 (402)
268 TIGR00769 AAA ADP/ATP carrier 89.4 21 0.00046 34.5 21.6 71 143-218 275-345 (472)
269 PF03092 BT1: BT1 family; Int 87.9 2.2 4.8E-05 40.6 7.9 57 142-204 326-382 (433)
270 TIGR00880 2_A_01_02 Multidrug 81.2 20 0.00044 26.7 11.0 44 60-104 89-132 (141)
271 KOG0637 Sucrose transporter an 77.8 4.1 8.8E-05 38.9 5.0 87 20-107 277-380 (498)
272 KOG4112 Signal peptidase subun 77.1 4.6 0.0001 29.4 3.9 56 174-232 21-76 (101)
273 PRK10263 DNA translocase FtsK; 76.2 17 0.00036 39.3 9.3 34 187-220 142-175 (1355)
274 KOG1479 Nucleoside transporter 75.7 16 0.00035 34.4 8.3 107 44-166 265-375 (406)
275 KOG1479 Nucleoside transporter 75.2 76 0.0016 30.0 17.9 33 133-166 116-148 (406)
276 KOG1237 H+/oligopeptide sympor 75.2 12 0.00027 37.0 7.8 96 131-232 455-565 (571)
277 COG5336 Uncharacterized protei 74.5 16 0.00034 27.5 6.3 30 69-98 53-82 (116)
278 TIGR00806 rfc RFC reduced fola 73.9 43 0.00093 32.6 10.7 93 61-180 301-393 (511)
279 TIGR00939 2a57 Equilibrative N 72.3 69 0.0015 30.6 11.9 57 133-195 371-427 (437)
280 TIGR00939 2a57 Equilibrative N 71.7 96 0.0021 29.6 15.8 33 133-166 105-137 (437)
281 PF03219 TLC: TLC ATP/ADP tran 70.2 1.1E+02 0.0024 29.8 21.0 158 55-218 173-361 (491)
282 COG3202 ATP/ADP translocase [E 70.0 1.1E+02 0.0024 29.7 16.8 169 18-201 23-209 (509)
283 PF03219 TLC: TLC ATP/ADP tran 68.0 1.2E+02 0.0027 29.5 15.1 121 70-201 71-205 (491)
284 KOG4830 Predicted sugar transp 67.9 6.5 0.00014 35.0 3.5 60 31-92 26-94 (412)
285 PRK11469 hypothetical protein; 67.2 74 0.0016 26.6 9.9 52 54-106 130-182 (188)
286 PF05631 DUF791: Protein of un 62.2 1.3E+02 0.0029 27.8 18.1 54 142-195 247-301 (354)
287 PF06645 SPC12: Microsomal sig 59.2 34 0.00075 24.0 5.3 51 179-232 11-61 (76)
288 PF09527 ATPase_gene1: Putativ 58.5 47 0.001 21.4 6.7 30 67-96 9-38 (55)
289 TIGR01666 YCCS hypothetical me 55.5 2.1E+02 0.0047 29.2 12.3 53 78-151 43-98 (704)
290 PF11947 DUF3464: Protein of u 55.3 1E+02 0.0022 24.9 8.0 50 134-192 97-146 (153)
291 PF01770 Folate_carrier: Reduc 52.7 2.1E+02 0.0046 27.2 11.0 94 60-180 287-380 (412)
292 PF13000 Acatn: Acetyl-coenzym 49.8 35 0.00076 33.2 5.4 252 23-296 1-291 (544)
293 KOG2082 K+/Cl- cotransporter K 49.8 2.1E+02 0.0046 29.5 10.7 21 90-110 497-517 (1075)
294 TIGR02230 ATPase_gene1 F0F1-AT 48.3 87 0.0019 23.3 6.2 26 67-92 51-76 (100)
295 PF00854 PTR2: POT family; In 41.8 1.6E+02 0.0035 27.0 8.6 76 33-109 42-122 (372)
296 TIGR01667 YCCS_YHJK integral m 40.4 4.3E+02 0.0092 27.1 13.0 53 78-151 43-98 (701)
297 PF10777 YlaC: Inner membrane 38.9 1.2E+02 0.0026 24.3 5.9 39 196-234 52-90 (155)
298 COG3619 Predicted membrane pro 38.9 2.6E+02 0.0056 24.2 18.1 24 64-88 61-84 (226)
299 PRK02237 hypothetical protein; 36.9 70 0.0015 24.1 4.1 49 58-107 56-104 (109)
300 PF06912 DUF1275: Protein of u 36.9 2.5E+02 0.0054 23.5 17.9 37 65-102 53-92 (209)
301 PF01528 Herpes_glycop: Herpes 36.4 1.1E+02 0.0023 28.7 6.2 22 86-107 200-221 (374)
302 PF02694 UPF0060: Uncharacteri 36.0 69 0.0015 24.1 4.0 50 58-108 54-103 (107)
303 COG3202 ATP/ADP translocase [E 35.6 4.3E+02 0.0094 25.8 19.6 76 144-224 294-370 (509)
304 PF07672 MFS_Mycoplasma: Mycop 34.4 3.3E+02 0.0072 24.2 10.9 107 64-191 147-257 (267)
305 PF02659 DUF204: Domain of unk 33.9 1.5E+02 0.0032 19.9 6.1 42 59-101 24-66 (67)
306 COG3086 RseC Positive regulato 32.7 2.3E+02 0.005 22.7 6.6 44 53-97 67-110 (150)
307 PF01733 Nucleoside_tran: Nucl 31.6 17 0.00038 32.7 0.3 55 133-193 247-301 (309)
308 COG4262 Predicted spermidine s 29.8 4.8E+02 0.01 24.6 14.2 95 45-161 33-132 (508)
309 PF12273 RCR: Chitin synthesis 27.2 35 0.00076 26.5 1.3 10 207-216 2-11 (130)
310 KOG3574 Acetyl-CoA transporter 27.0 5.7E+02 0.012 24.5 10.0 59 143-207 378-436 (510)
311 KOG3810 Micronutrient transpor 26.5 5.5E+02 0.012 24.2 10.5 90 64-180 277-366 (433)
312 PHA02688 ORF059 IMV protein VP 24.2 2E+02 0.0044 26.1 5.6 38 71-108 253-304 (323)
313 PF03213 Pox_P35: Poxvirus P35 23.8 2E+02 0.0044 26.1 5.5 38 71-108 255-306 (325)
314 COG5547 Small integral membran 23.5 2.3E+02 0.005 18.8 4.7 15 137-151 34-48 (62)
315 PF07672 MFS_Mycoplasma: Mycop 23.4 64 0.0014 28.6 2.3 54 173-226 3-61 (267)
316 PF02632 BioY: BioY family; I 22.7 3.6E+02 0.0078 21.5 6.4 24 65-89 60-83 (148)
317 PRK10692 hypothetical protein; 22.2 2.6E+02 0.0057 20.2 4.7 22 87-108 2-23 (92)
318 COG1268 BioY Uncharacterized c 21.7 4.8E+02 0.01 21.8 7.6 21 65-85 89-109 (184)
319 PF06645 SPC12: Microsomal sig 21.3 3E+02 0.0064 19.2 6.5 26 60-85 9-34 (76)
320 PF04479 RTA1: RTA1 like prote 20.6 4.4E+02 0.0095 22.5 7.0 19 92-110 3-21 (226)
321 TIGR02230 ATPase_gene1 F0F1-AT 20.5 3.7E+02 0.008 20.0 6.5 24 182-205 49-72 (100)
322 PF04226 Transgly_assoc: Trans 20.3 2.4E+02 0.0052 17.7 5.0 30 187-216 6-35 (48)
323 PF06796 NapE: Periplasmic nit 20.0 1.5E+02 0.0032 19.6 2.9 29 17-45 14-46 (56)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=9.2e-34 Score=273.74 Aligned_cols=278 Identities=47% Similarity=0.804 Sum_probs=254.1
Q ss_pred cCCCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHH
Q 021653 17 QKGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIAS 96 (309)
Q Consensus 17 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~ 96 (309)
++++|+++.++++.+.++++++|++..|+..|++..+|.+...++..++.+.+..++.++++++++|.|+||++++.++.
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s 111 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS 111 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCC---CCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhh
Q 021653 97 IIYQIGMICLTISAILPQLRPPPC---EGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATK 173 (309)
Q Consensus 97 ~l~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~ 173 (309)
+++.+|..+++.+..+|.+++..| ...+.|+.+++.+...++.++.+.++|.|+.+++..++.+||+++.++.++..
T Consensus 112 ~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~ 191 (571)
T KOG1237|consen 112 LISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKG 191 (571)
T ss_pred HHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhC
Confidence 999999999999999999999997 34578999999999999999999999999999999999999999887778888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHhCcceeccCCCCChhHHHHHHHHHHHHc
Q 021653 174 TWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYRNLDPAGSPFTRLLQVCVAAFRK 253 (309)
Q Consensus 174 r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (309)
+.++|+|+++..++|..++..+..|++++.||.++|.++.+++++++++|+++.+.|+.++|.++|.+.+++++.++.++
T Consensus 192 ~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~k 271 (571)
T KOG1237|consen 192 IPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAFK 271 (571)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcchhhhhhhhhhhhcCCcccCCccccccccccccccccccCC
Q 021653 254 RKLTMVTDPKLLYENEELDAAISLGGKLLHTKHMKDIYHRFNRHNIITISF 304 (309)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 304 (309)
++...+.+.+++.+. .....+...++.|+ ++|||++.++.|
T Consensus 272 ~~~~~~~~~~~~~~~------~~~~~~~~~t~~f~----~l~kaa~~~~~~ 312 (571)
T KOG1237|consen 272 RKAVVSLDPEELYYD------CTDSVAIEGTKPFR----FLDKAALKTSDD 312 (571)
T ss_pred HhccCCCcchhcccc------ccccccccCCcccc----hhhHhhccCCcc
Confidence 988877765443111 11112334588999 999999997754
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.94 E-value=4e-26 Score=212.03 Aligned_cols=193 Identities=27% Similarity=0.473 Sum_probs=178.4
Q ss_pred ccCCCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcC----CCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHH
Q 021653 16 RQKGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLH----MPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWT 91 (309)
Q Consensus 16 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~----~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~ 91 (309)
..-++.|.++.+..++++|||+|||+...+..|++.+++ +|.+++..+.+.+....++.++++||++||++|+|++
T Consensus 15 ~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t 94 (498)
T COG3104 15 KFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT 94 (498)
T ss_pred ccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 335678999999999999999999999999999999988 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhh
Q 021653 92 ITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQA 171 (309)
Q Consensus 92 i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~ 171 (309)
+.+|.+++++|.++++.+. ......+++++.++++|.|+..+++..+++|++|++|+
T Consensus 95 I~lGail~~iGh~~L~~~~--------------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dp--- 151 (498)
T COG3104 95 IVLGAILMAIGHLVLAISS--------------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDP--- 151 (498)
T ss_pred HHHHHHHHHHHHHHHhccc--------------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCc---
Confidence 9999999999999999752 01566799999999999999999999999999999987
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHhCcceec
Q 021653 172 TKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYRN 232 (309)
Q Consensus 172 ~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~ 232 (309)
+|-..|+.+|.++|+|++++|.+++++.+++||..+|.+.++-+.++++.++.+++.+..
T Consensus 152 -rrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~ 211 (498)
T COG3104 152 -RRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKG 211 (498)
T ss_pred -ccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcC
Confidence 688889999999999999999999999999999999999999999999999988776543
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.93 E-value=5e-24 Score=204.85 Aligned_cols=190 Identities=17% Similarity=0.300 Sum_probs=167.2
Q ss_pred cCCCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHH
Q 021653 17 QKGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIAS 96 (309)
Q Consensus 17 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~ 96 (309)
.+++||.++.+++.+++|++++|++..+++.|+++++|++..+++++.+.+....++.++++|+++||++||||+++++.
T Consensus 9 ~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~ 88 (489)
T PRK10207 9 LLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGA 88 (489)
T ss_pred hhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999559999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhH
Q 021653 97 IIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWK 176 (309)
Q Consensus 97 ~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~ 176 (309)
+++.+|.+++.++.. ....++++|.++++|.|+..++..++++|++|++++ +|++
T Consensus 89 ~~~~~g~~~~~~~~~---------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~----~~~~ 143 (489)
T PRK10207 89 IVLAIGYFMTGMSLL---------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDP----RLDG 143 (489)
T ss_pred HHHHHHHHHHHHhcc---------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCch----hhhc
Confidence 999999998887651 233466889999999999999999999999998642 4677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHhCccee
Q 021653 177 YFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYR 231 (309)
Q Consensus 177 ~~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~ 231 (309)
.+++++++.|+|+.++|.+++++.+..||++.|++.++.++++++.+...++.++
T Consensus 144 ~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~ 198 (489)
T PRK10207 144 AFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVK 198 (489)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhc
Confidence 8999999999999999999999999999999999987766666666665554443
No 4
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.90 E-value=2.3e-22 Score=192.91 Aligned_cols=189 Identities=19% Similarity=0.312 Sum_probs=166.9
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHh--cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHH
Q 021653 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQ--LHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIA 95 (309)
Q Consensus 18 ~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~--~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~ 95 (309)
.++.+..+.+++.++++++++|++..+++.|++++ +|++..+++.+.+.+.++.+++++++|+++||++|||+++.++
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~ 85 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLG 85 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHH
Confidence 34567788888999999999999999999999987 9999999999999999999999999999999955999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhh
Q 021653 96 SIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTW 175 (309)
Q Consensus 96 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~ 175 (309)
.++..++.+++.++. +...+++++.+.|+|.|+..++..++++|++|++++ ++|+
T Consensus 86 ~~~~~~g~~~~~~~~----------------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~---~~r~ 140 (475)
T TIGR00924 86 GIVLMLGHFMLAMSI----------------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDM---PRRD 140 (475)
T ss_pred HHHHHHHHHHHHhcc----------------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCc---cccc
Confidence 999999998888765 566788899999999999999999999999987632 1588
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHhCccee
Q 021653 176 KYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYR 231 (309)
Q Consensus 176 ~~~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~ 231 (309)
+.+++++++.|+|+.+++.+.+++.++.||++.|.+.++..+++.+.+...++.++
T Consensus 141 ~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~ 196 (475)
T TIGR00924 141 GGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLR 196 (475)
T ss_pred ceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccc
Confidence 89999999999999999999999999999999999988777777666666555443
No 5
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.90 E-value=3.8e-22 Score=196.35 Aligned_cols=203 Identities=31% Similarity=0.607 Sum_probs=176.9
Q ss_pred HHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 021653 36 LAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQL 115 (309)
Q Consensus 36 ~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~ 115 (309)
|++|++..++..|+++.+|++.+.+..+.+.+....++.++++|+++|+++||+++++++.+++.+|.++++++. .|..
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a-~~~~ 79 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGA-IPSS 79 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc-Cccc
Confidence 468999999999999999999999999999999999999999999999999999999999999999999998765 2211
Q ss_pred CCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 021653 116 RPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTV 195 (309)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~ 195 (309)
. .......+++++.+.++|.|++.+++.++++||+++++ ++++.++|+|+|+++|+|+++++++
T Consensus 80 ~-------------~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~---~~~~~s~F~~fY~~iNiGSlis~~i 143 (654)
T TIGR00926 80 G-------------HPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQ---LSLRSRFFSFFYFAINAGSLISTII 143 (654)
T ss_pred c-------------cchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccc---hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 01234557789999999999999999999999998643 3368999999999999999999999
Q ss_pred HHHhhccc-------cchhhhhHHHHHHHHHHHHHHHhCcceeccCCCCChhHHHHHHHHHHHHcCC
Q 021653 196 LVYIQDNI-------GWGWGLGIPTFAMFLSIIAFLIGYPLYRNLDPAGSPFTRLLQVCVAAFRKRK 255 (309)
Q Consensus 196 ~~~i~~~~-------gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (309)
.+++++.+ +|..+|.+++++++++++++..+++++++.+|.+++..+..+++..+.+++.
T Consensus 144 ~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~ 210 (654)
T TIGR00926 144 TPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRF 210 (654)
T ss_pred HHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhh
Confidence 99998543 6999999999999999999999999888877888888888888888777643
No 6
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.89 E-value=1.7e-21 Score=185.89 Aligned_cols=186 Identities=23% Similarity=0.416 Sum_probs=161.7
Q ss_pred CccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHH
Q 021653 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (309)
Q Consensus 20 ~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~ 99 (309)
+++.++.+++.++++++.+|++..+++.|+++.+|++..+++.+.+.+....+++++++|+++||++||||++.++.++.
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~ 86 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLM 86 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999669999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHH
Q 021653 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (309)
Q Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~ 179 (309)
.+|.+++.... .....++++..+.++|.|...++..++++|++|++++ +|.+.++
T Consensus 87 ~lg~lll~~~~---------------------~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~----~R~sgf~ 141 (493)
T PRK15462 87 AIGHVVLGASE---------------------IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDP----RRDGGFS 141 (493)
T ss_pred HHHHHHHHHhh---------------------cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCc----cccceeh
Confidence 99987665432 0223355666677788898889999999999998643 6888999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHhCcce
Q 021653 180 WYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLY 230 (309)
Q Consensus 180 ~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~ 230 (309)
++|...|+|+.++|.+++++.+..||+.+|.+.++.++++++.++...+.+
T Consensus 142 i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l 192 (493)
T PRK15462 142 LMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHF 192 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 999999999999999999999999999999998887777777776665544
No 7
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.88 E-value=4e-21 Score=185.44 Aligned_cols=185 Identities=19% Similarity=0.365 Sum_probs=158.8
Q ss_pred CCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHH
Q 021653 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (309)
Q Consensus 19 ~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l 98 (309)
++.+.++.+++.++++++++|++..+++.|+++++|++..+++.+.+.+....+..++++|+++||++|||+++.++.++
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~ 97 (500)
T PRK09584 18 KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIV 97 (500)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 45677889999999999999999999999999999999999998888888787888889999999944999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHH
Q 021653 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (309)
Q Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~ 178 (309)
..+|..++.++. .....+++++++.|+|.|...++..++++|++|++++ ++.+.+
T Consensus 98 ~~ig~~l~~~~~---------------------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~----~~~~~~ 152 (500)
T PRK09584 98 LAIGYALVAWSG---------------------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDP----RLDGAF 152 (500)
T ss_pred HHHHHHHHHHhc---------------------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCch----hhhhcc
Confidence 999988887653 0345677889999999999999999999999987532 456678
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHhCc
Q 021653 179 NWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (309)
Q Consensus 179 ~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~~ 228 (309)
++++++.++|+.++|.+.+++.++.||++.|++.++..+++++.+....+
T Consensus 153 ~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~ 202 (500)
T PRK09584 153 TMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQR 202 (500)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 89999999999999999999999999999999988777666655554443
No 8
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.78 E-value=2.7e-17 Score=154.17 Aligned_cols=190 Identities=11% Similarity=0.122 Sum_probs=155.3
Q ss_pred cccccccCCCccccccCCCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHH
Q 021653 2 IENMEEKGSNSHVKRQKGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFV 81 (309)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~l 81 (309)
.+++.++... +...|..|+....+....++.....|.....++. +.+++|+++.+.+...+....+..++.++.|++
T Consensus 2 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l 78 (394)
T PRK10213 2 SEFIAENRGA--DAITRPNWSAVFSVAFCVACLIIVEFLPVSLLTP-MAQDLGISEGVAGQSVTVTAFVAMFASLFITQT 78 (394)
T ss_pred CccccCCCCC--ccchhhHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444322 2344667877666665555555555555555555 457899999999999999999999999999999
Q ss_pred HHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhc
Q 021653 82 ADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGAD 161 (309)
Q Consensus 82 aD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad 161 (309)
+||+ |||+.+..+.++..++.++...+. +.+.+++.|++.|++.|...+....++.|
T Consensus 79 ~Dr~-grr~~~~~~~~~~~~~~~~~~~~~----------------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 135 (394)
T PRK10213 79 IQAT-DRRYVVILFAVLLTLSCLLVSFAN----------------------SFSLLLIGRACLGLALGGFWAMSASLTMR 135 (394)
T ss_pred hccc-CcHHHHHHHHHHHHHHHHHHHHHC----------------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9996 999999999999999888887765 78999999999999999999999999999
Q ss_pred ccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHH
Q 021653 162 QFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAF 223 (309)
Q Consensus 162 ~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~ 223 (309)
.+|++ +|+...+.+..+.++|..++|.+++++.+..||++.|++.+++.++..+..
T Consensus 136 ~~~~~------~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~ 191 (394)
T PRK10213 136 LVPPR------TVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWI 191 (394)
T ss_pred HcCHh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHH
Confidence 99977 799999999999999999999999999999999999988776655544333
No 9
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.77 E-value=1e-18 Score=160.90 Aligned_cols=174 Identities=13% Similarity=0.167 Sum_probs=152.8
Q ss_pred CccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHH
Q 021653 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (309)
Q Consensus 20 ~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~ 99 (309)
.++.+..+.++.++++.--|.+...+ .=.++.+|.++...+.+.+++.+...++++++|+++||| .|++++.+|..++
T Consensus 31 ~~~~l~il~~vnlmny~Dr~~iagv~-~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~iW 108 (493)
T KOG1330|consen 31 PTLTLVILCLVNLMNYADRYTIAGVL-KEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIFIW 108 (493)
T ss_pred chHHHHHHHHHHHHHHhhhhhhhhhh-HHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHHHH
Confidence 34556666677777777777666533 334567899999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHH
Q 021653 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (309)
Q Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~ 179 (309)
.++.+...++. .++++.+.|.+.|+|.+...+..+.+++|.||.. +|++.++
T Consensus 109 ~~Av~~~~fs~----------------------~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~------~Rs~~~~ 160 (493)
T KOG1330|consen 109 TLAVFASGFSN----------------------HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDD------KRSRVLG 160 (493)
T ss_pred HHHHHHHHHHH----------------------HHHHHHHHHHHhccchhhhcccchhHhhhcCcch------hhhHHHH
Confidence 99999999987 8999999999999999999999999999999988 8999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccc-chhhhhHHHHHHHHHHHHH
Q 021653 180 WYYFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAF 223 (309)
Q Consensus 180 ~~~~~~~iG~~l~~~~~~~i~~~~g-w~~~f~i~~~~~~~~~~~~ 223 (309)
++|+++++|+.+|.++++++.+..+ ||++|+..+++.++..++.
T Consensus 161 ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~ 205 (493)
T KOG1330|consen 161 IFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLV 205 (493)
T ss_pred HhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHH
Confidence 9999999999999999999988776 9999999888876655443
No 10
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.77 E-value=4.2e-17 Score=153.76 Aligned_cols=177 Identities=14% Similarity=0.125 Sum_probs=146.9
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHH
Q 021653 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI 97 (309)
Q Consensus 18 ~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~ 97 (309)
|.+|+..+.+.+..+++......+.. ....+++++|++..+.+++.+++.++..+++++.|+++||+ |||+++.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~ 81 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGF-AGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMV 81 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHH-HHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHH
Confidence 33566555555555555554444443 44588899999999999999999999999999999999996 99999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHH
Q 021653 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (309)
Q Consensus 98 l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 177 (309)
++.++.+++.++. +...++++|++.|++.|+..+....+++|.+|++ +|++.
T Consensus 82 ~~~~~~~~~~~~~----------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~rg~~ 133 (412)
T TIGR02332 82 LWGIASTATMFAT----------------------GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAY------FRARA 133 (412)
T ss_pred HHHHHHHHHHHhc----------------------CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHH------HHHHH
Confidence 9999999988876 7888999999999999999988888999999976 79999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc------cccchhhhhHHHHHHHHHHHHHH
Q 021653 178 FNWYYFVMGAAILVAVTVLVYIQD------NIGWGWGLGIPTFAMFLSIIAFL 224 (309)
Q Consensus 178 ~~~~~~~~~iG~~l~~~~~~~i~~------~~gw~~~f~i~~~~~~~~~~~~~ 224 (309)
.++++.+.++|..+++.+.+++.+ ..|||+.|++.++..++..++.+
T Consensus 134 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~ 186 (412)
T TIGR02332 134 NALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTW 186 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999888763 46999999997776655444433
No 11
>PRK10054 putative transporter; Provisional
Probab=99.77 E-value=9.6e-17 Score=150.53 Aligned_cols=173 Identities=13% Similarity=0.135 Sum_probs=149.0
Q ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHH
Q 021653 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (309)
Q Consensus 22 ~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~ 101 (309)
|+.+.+++..++..+..+.+..+++.|+++++|++..+.+.+.+...++..++.++.|+++||+ |||+++.++.++..+
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~~~~ 85 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITAFAS 85 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHHHHH
Confidence 4566777778888888888889999999999999999999999999999999999999999996 999999999998888
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHH
Q 021653 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (309)
Q Consensus 102 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~ 181 (309)
+.++..++. +.+.+++.+.+.+.+.+...++...+.+|.+|++ +|++.+++.
T Consensus 86 ~~~~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~ 137 (395)
T PRK10054 86 GFIAIPLVN----------------------NVTLVVLFFALINCAYSVFSTVLKAWFADNLSST------SKTKIFSLN 137 (395)
T ss_pred HHHHHHHHh----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHh------HHHHHHHHH
Confidence 888777766 6667777788888887877888889999999876 799999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHH
Q 021653 182 YFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFL 224 (309)
Q Consensus 182 ~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~ 224 (309)
+...++|..++|.+.+++.+ .+|+..|++.+++.++..++..
T Consensus 138 ~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~ 179 (395)
T PRK10054 138 YTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQ 179 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHH
Confidence 99999999999999998875 6899999988877766654433
No 12
>PRK03545 putative arabinose transporter; Provisional
Probab=99.77 E-value=7e-17 Score=150.87 Aligned_cols=176 Identities=9% Similarity=0.044 Sum_probs=145.6
Q ss_pred CccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHH
Q 021653 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (309)
Q Consensus 20 ~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~ 99 (309)
+|...+.+.+..++.....+.....+ ..+.+++|.+..+.+++.+.+.++..+++++.|+++||+ |||+++.++.++.
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~-~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~ 84 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLL-SDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLF 84 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcch-HHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHH
Confidence 35445555554555444434322223 456789999999999999999999999999999999996 9999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHH
Q 021653 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (309)
Q Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~ 179 (309)
.++.++..++. +.+.++++|+++|++.+...+...+++.|.+|++ +|++..+
T Consensus 85 ~~~~~~~~~~~----------------------~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~g 136 (390)
T PRK03545 85 IASHVLSALAW----------------------NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAG------KKAQALS 136 (390)
T ss_pred HHHHHHHHHhc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChh------hhhhHHH
Confidence 99998888776 7888999999999999988899999999999977 7999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHH
Q 021653 180 WYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (309)
Q Consensus 180 ~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~ 225 (309)
++..+.++|..+++.+.+.+.+..|||+.|++.+++.++..+....
T Consensus 137 ~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~ 182 (390)
T PRK03545 137 LLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIK 182 (390)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988899999999988776665544333
No 13
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.76 E-value=1.3e-16 Score=150.60 Aligned_cols=152 Identities=11% Similarity=0.147 Sum_probs=132.0
Q ss_pred hHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccc
Q 021653 49 LTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQE 128 (309)
Q Consensus 49 l~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (309)
+.+++|.+..+.+..++.+.++..++.++.|+++||+ |||++++.+.+++.++.+++..+.
T Consensus 42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~------------------ 102 (413)
T PRK15403 42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFTT------------------ 102 (413)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHcC------------------
Confidence 5678999999999999999999999999999999996 999999999999999988888766
Q ss_pred ccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhh
Q 021653 129 ANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWG 208 (309)
Q Consensus 129 ~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~ 208 (309)
+...++++|+++|++.+...+....+..|.+|++ ++++..+++....++|..++|.+++++.+..|||+.
T Consensus 103 ----~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~ 172 (413)
T PRK15403 103 ----SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQT------KGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVL 172 (413)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 7888999999999999877777778889999976 688889999999999999999999999888899999
Q ss_pred hhHHHHHHHHHHHHHHHhCcc
Q 021653 209 LGIPTFAMFLSIIAFLIGYPL 229 (309)
Q Consensus 209 f~i~~~~~~~~~~~~~~~~~~ 229 (309)
|++.++..+++.+..+...|+
T Consensus 173 f~~~~~~~~i~~~~~~~~lp~ 193 (413)
T PRK15403 173 FAIIAVMGLIAFVGLLLAMPE 193 (413)
T ss_pred HHHHHHHHHHHHHHHHHhCCC
Confidence 998887766665544443343
No 14
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.75 E-value=9.9e-17 Score=146.38 Aligned_cols=165 Identities=16% Similarity=0.292 Sum_probs=141.7
Q ss_pred HHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Q 021653 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTI 108 (309)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~ 108 (309)
+..++..+........++.++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.++..+
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhhh
Confidence 344455555555555666588899999999999999999999999999999999996 9999999999999999555554
Q ss_pred HhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHH
Q 021653 109 SAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAA 188 (309)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG 188 (309)
+. +.+.+++++++.|++.+...+....++.|.+|++ +|++.+++.+...++|
T Consensus 82 ~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~g 133 (352)
T PF07690_consen 82 AS----------------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPPE------ERGRAFGILSAGFSLG 133 (352)
T ss_dssp HC----------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTC------CHHHHHHHHHHHHHHH
T ss_pred hh----------------------hHHHHhhhccccccccccccccccccccccchhh------hhhhccccccchhhhh
Confidence 44 5568899999999999999999999999999997 6999999999999999
Q ss_pred HHHHHHHHHHhhccccchhhhhHHHHHHHHHHHH
Q 021653 189 ILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (309)
Q Consensus 189 ~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~ 222 (309)
..+++.+.+++.+..+|++.|++.+++.++..++
T Consensus 134 ~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 134 SILGPLLGGFLISYFGWRWAFLISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHH
T ss_pred hhcccchhhhhhhccccccccccccchhhhhhhh
Confidence 9999999999998899999999999888777654
No 15
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.74 E-value=2.9e-16 Score=145.97 Aligned_cols=152 Identities=15% Similarity=0.066 Sum_probs=121.7
Q ss_pred HHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCc
Q 021653 44 NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGE 123 (309)
Q Consensus 44 ~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 123 (309)
...+.+.+++|++..+.+.+.+.+.+++.+++++.|+++||+ |||+++..+......+.+ .....
T Consensus 12 ~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~-~~~~~------------- 76 (368)
T TIGR00903 12 PVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAG-RLLDP------------- 76 (368)
T ss_pred hhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHH-HHHHh-------------
Confidence 344566789999999999999999999999999999999997 999987665554444432 22221
Q ss_pred cccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 021653 124 QVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNI 203 (309)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~ 203 (309)
.+...++++|++.|+|.+.. .+.....+|.+|++ +|++..++.+.+..+|..+++.+.+++.+..
T Consensus 77 --------~~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~------~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~ 141 (368)
T TIGR00903 77 --------FNYEWLLACQLLAALGQPFL-LNAFAPAASQIREE------RRDLVISLLSFAMYLGIIFALAAGLKIYTAG 141 (368)
T ss_pred --------ccHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 16788999999999999864 45555568999976 7999999999999999999999999999999
Q ss_pred cchhhhhHHHHHHHHHHHHHHH
Q 021653 204 GWGWGLGIPTFAMFLSIIAFLI 225 (309)
Q Consensus 204 gw~~~f~i~~~~~~~~~~~~~~ 225 (309)
|||..|.+.+++.++..++.+.
T Consensus 142 gWr~~f~~~~~l~~~~~~~~~~ 163 (368)
T TIGR00903 142 GLQLLIIPIAAVAAAGIILVLA 163 (368)
T ss_pred chHHHHHHHHHHHHHHHHHHHH
Confidence 9999998877766555444433
No 16
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.74 E-value=4.8e-16 Score=144.01 Aligned_cols=177 Identities=17% Similarity=0.151 Sum_probs=145.8
Q ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHH
Q 021653 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (309)
Q Consensus 22 ~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~ 101 (309)
+.++.+....++..+........+| .+.+++|.+..+.+.+.+.+..+..++.++.|+++||+ |||+++.++.++..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~ 82 (385)
T TIGR00710 5 AFALLLGCLSILGPLGIDMYLPAFP-EIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIFAL 82 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHHH
Confidence 3444444444445554444444444 56678999999999999999999999999999999996 999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHH
Q 021653 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (309)
Q Consensus 102 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~ 181 (309)
+.+++..+. +.+.++++|++.|++.+...+....++.|.+|++ +|++..+++
T Consensus 83 ~~~~~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 134 (385)
T TIGR00710 83 SSLGLALSN----------------------NIETLLVLRFVQAFGASAGSVISQALVRDIYPGE------ELSRIYSIL 134 (385)
T ss_pred HHHHHHHHc----------------------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcH------HHHHHHHHH
Confidence 888887766 7788899999999999999999999999999976 799999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHhCc
Q 021653 182 YFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (309)
Q Consensus 182 ~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~~ 228 (309)
+...++|..+++.+.+++.+..+|+..|++.+++.++..+..+...|
T Consensus 135 ~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (385)
T TIGR00710 135 MPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILP 181 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999988899999998887776665554444333
No 17
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.74 E-value=2.6e-16 Score=151.82 Aligned_cols=179 Identities=12% Similarity=0.059 Sum_probs=147.4
Q ss_pred ccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHH
Q 021653 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (309)
Q Consensus 21 ~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~ 100 (309)
|..+..+.+..++.......+...+|.. .+++|.+..+.+++.+.+.++...+.++.|+++||+ |||++++++.+++.
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i-~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~ 82 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTL-SMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFG 82 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHH
Confidence 4455555555666655555455555544 678999999999999999999999999999999996 99999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHH
Q 021653 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (309)
Q Consensus 101 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 180 (309)
++.+++..+. +.+.++++|+++|+|.++..+.....+.+.+++++ +|++.+++
T Consensus 83 ~~~~~~~~a~----------------------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~-----~r~~~~g~ 135 (495)
T PRK14995 83 LASLAAAFSP----------------------TASWLIATRALLAIGAAMIVPATLAGIRATFTEEK-----QRNMALGV 135 (495)
T ss_pred HHHHHHHHcC----------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH-----HHHHHHHH
Confidence 9999988876 88899999999999999988887777777774322 79999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHhCc
Q 021653 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (309)
Q Consensus 181 ~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~~ 228 (309)
+....++|..++|.+++++.+..|||+.|++...+.++.+++.+...|
T Consensus 136 ~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~ 183 (495)
T PRK14995 136 WAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVP 183 (495)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999877666655544444444
No 18
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.74 E-value=6.7e-16 Score=142.15 Aligned_cols=181 Identities=12% Similarity=0.099 Sum_probs=162.7
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHH
Q 021653 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI 97 (309)
Q Consensus 18 ~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~ 97 (309)
+..|..++.+.+..|.....=+....-++ -+.+++|.|..+++..++.|..+..+++++...+.||+ .||+.++....
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp-~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l~ 86 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLP-PIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLLA 86 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHHH
Confidence 44566666666666666666565555554 55689999999999999999999999999999999996 99999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHH
Q 021653 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (309)
Q Consensus 98 l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 177 (309)
++++|.++.+++. ++.++.++|++.|+..|.+.+...+..++..|++ +|++.
T Consensus 87 lFi~~n~l~alAp----------------------~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~------~~~~A 138 (394)
T COG2814 87 LFIVSNLLSALAP----------------------SFAVLLLARALAGLAHGVFWSIAAALAARLVPPG------KRGRA 138 (394)
T ss_pred HHHHHHHHHHHhc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc------chhhH
Confidence 9999999999998 9999999999999999999999999999999998 79999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHhCc
Q 021653 178 FNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (309)
Q Consensus 178 ~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~~ 228 (309)
.+....+.++...+|..++.++.+.+|||..|++.+.+.++.++..+...|
T Consensus 139 iaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 139 LALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999998888888877777
No 19
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.74 E-value=4.5e-16 Score=144.88 Aligned_cols=174 Identities=11% Similarity=0.172 Sum_probs=147.9
Q ss_pred cCCCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHH
Q 021653 17 QKGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIAS 96 (309)
Q Consensus 17 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~ 96 (309)
.+.+|+....+.+..++..+..+...... ..+++++|++..+.+.+.+.+.++..++.++.|+++||+ |||+++.++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~ 84 (405)
T TIGR00891 7 TRAQWNAFSAAWLGWLLDAFDFFLVALVL-AEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTSI 84 (405)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHH
Confidence 45677777777777777777666555544 466789999999999999999999999999999999996 9999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhH
Q 021653 97 IIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWK 176 (309)
Q Consensus 97 ~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~ 176 (309)
++..++.+++.++. +.+.++++|++.|+|.+...+....++.|.+|++ +|++
T Consensus 85 ~~~~~~~~~~~~~~----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~------~~~~ 136 (405)
T TIGR00891 85 VLFSAGTLACGFAP----------------------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKH------LRNK 136 (405)
T ss_pred HHHHHHHHHHHHhc----------------------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChh------hhhH
Confidence 99999888887766 7788899999999999999999999999999987 7999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccc--chhhhhHHHHHHHHHH
Q 021653 177 YFNWYYFVMGAAILVAVTVLVYIQDNIG--WGWGLGIPTFAMFLSI 220 (309)
Q Consensus 177 ~~~~~~~~~~iG~~l~~~~~~~i~~~~g--w~~~f~i~~~~~~~~~ 220 (309)
..++++.+.++|..+++.+.+.+.+..+ |++.|.+.++..++.+
T Consensus 137 ~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~ 182 (405)
T TIGR00891 137 ASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL 182 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888877665 9999887655544433
No 20
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.73 E-value=7.1e-16 Score=144.87 Aligned_cols=168 Identities=13% Similarity=0.130 Sum_probs=148.6
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Q 021653 25 PFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMI 104 (309)
Q Consensus 25 ~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~ 104 (309)
++++...++...+.+.+...++.|+++++|++..+.+.+.+...+...+..+++|+++||+ |||+++.++.++..++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 5566777788888888888999999999999999999999999999999999999999996 999999999999999888
Q ss_pred HHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHH
Q 021653 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 184 (309)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~ 184 (309)
++.... +.+.+++.+++.|++.+...+...+++.|.+|++ +|++..++++..
T Consensus 92 ~~~~~~----------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~a~~~~~~~ 143 (400)
T PRK11646 92 TMAIAH----------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPH------QRGRFFSLLMMQ 143 (400)
T ss_pred HHHHhc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH------HHHHHHHHHHHH
Confidence 887655 6778889999999999988888899999999876 799999999999
Q ss_pred HHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHH
Q 021653 185 MGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (309)
Q Consensus 185 ~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~ 222 (309)
.++|..++|.+++++. ..||++.|++.++..++..++
T Consensus 144 ~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~ 180 (400)
T PRK11646 144 DSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAF 180 (400)
T ss_pred HHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988 679999999877766555433
No 21
>PRK12382 putative transporter; Provisional
Probab=99.73 E-value=8.6e-16 Score=143.45 Aligned_cols=171 Identities=15% Similarity=0.096 Sum_probs=136.2
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Q 021653 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (309)
Q Consensus 24 ~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~ 103 (309)
.+.+.+..++...........++.|+.+++|+|..+.+.+.+.+.++..+++++.|+++||+ |||+.+.++.++..++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~ 95 (392)
T PRK12382 17 LFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACGLAG 95 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHHHHH
Confidence 34444455555555555667788889999999999999999999999999999999999996 99999999988777665
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHH
Q 021653 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (309)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~ 183 (309)
+........+.. ...+...++++|++.|+|.+...+....++.|.+|++ +|++..+++..
T Consensus 96 ~~~~~~~~~~~~--------------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~a~~~~~~ 155 (392)
T PRK12382 96 LAYLLAAILPVS--------------APFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPK------HSGKVMSWNGM 155 (392)
T ss_pred HHHHhhhccccc--------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcc------ccchhhhHHHH
Confidence 543332211110 0126778899999999999998888888999999876 79999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccchhhhhHHHHH
Q 021653 184 VMGAAILVAVTVLVYIQDNIGWGWGLGIPTFA 215 (309)
Q Consensus 184 ~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~ 215 (309)
+.++|..+++.+++++.+..||+..+.+..+.
T Consensus 156 ~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~ 187 (392)
T PRK12382 156 AMYGALAAGAPLGLLLHSHFGFAALALTTMVL 187 (392)
T ss_pred HHHHHHHHHHHHHHHHHhccChHHHHHHHHHH
Confidence 99999999999999998888999876655443
No 22
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.72 E-value=6.6e-16 Score=148.83 Aligned_cols=187 Identities=10% Similarity=0.041 Sum_probs=131.1
Q ss_pred CccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHH
Q 021653 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (309)
Q Consensus 20 ~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~ 99 (309)
.|+.....+...++..+.+|++..++|.|+++.+|++..+.........++..++.+++|+++||+ |||+++.++.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~ 326 (490)
T PRK10642 248 HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVAL 326 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 344444444445556778888999999999989999998888777788888899999999999996 9999998887654
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHH
Q 021653 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (309)
Q Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~ 179 (309)
.++.+.+..... ..+...+++++++.+++.++..+....+..|.+|++ .|++..+
T Consensus 327 ~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~------~Rg~~~g 381 (490)
T PRK10642 327 FVLAIPAFILIN-------------------SNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTH------IRYSALA 381 (490)
T ss_pred HHHHHHHHHHHh-------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc------cchHHHH
Confidence 443333222110 014566777888888887777777888889999988 6999888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccc-cchhhhhHHHHHHHHHHH--HHHHhCcceec
Q 021653 180 WYYFVMGAAILVAVTVLVYIQDNI-GWGWGLGIPTFAMFLSII--AFLIGYPLYRN 232 (309)
Q Consensus 180 ~~~~~~~iG~~l~~~~~~~i~~~~-gw~~~f~i~~~~~~~~~~--~~~~~~~~~~~ 232 (309)
+.+....+++.++|.+.+++.+.. +|+.++++..+..++.++ .+.+++|++..
T Consensus 382 ~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~ 437 (490)
T PRK10642 382 AAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETANRPL 437 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccCCCC
Confidence 744445566678888888887654 466665554444433332 23356665543
No 23
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.72 E-value=4.8e-16 Score=155.17 Aligned_cols=166 Identities=15% Similarity=0.116 Sum_probs=136.4
Q ss_pred HHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 021653 42 NTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCE 121 (309)
Q Consensus 42 ~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~ 121 (309)
...+.+++.++++++..+.+++.+.+.++..++++++|+++||+ |||+++++++++..++.+++.++.
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~afa~----------- 253 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSFVQ----------- 253 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHh-----------
Confidence 44455677789999999999999999999999999999999996 999999999999999888888776
Q ss_pred CccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 021653 122 GEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD 201 (309)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~ 201 (309)
+.+.++++|++.|+|.|+..++.+.+++|.+|.+ .|+...+++..+..+|.++++.++..+..
T Consensus 254 -----------s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~------~Rg~~~g~~~~~~~iG~ila~~la~~il~ 316 (742)
T TIGR01299 254 -----------GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQE------KRGEHLSWLCMFWMIGGIYAAAMAWAIIP 316 (742)
T ss_pred -----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888999999999999999999999999999987 79999999999999999998876655443
Q ss_pred c-------------ccchhhhhHHHHHHHHHHHH--HHHhCcceeccCCC
Q 021653 202 N-------------IGWGWGLGIPTFAMFLSIIA--FLIGYPLYRNLDPA 236 (309)
Q Consensus 202 ~-------------~gw~~~f~i~~~~~~~~~~~--~~~~~~~~~~~~~~ 236 (309)
. .+||+.+++.++..++.+++ +.+++|+|...+.+
T Consensus 317 ~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr 366 (742)
T TIGR01299 317 HYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGK 366 (742)
T ss_pred hccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCC
Confidence 2 35888887766655544433 34566777544433
No 24
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.72 E-value=1.2e-15 Score=143.28 Aligned_cols=152 Identities=13% Similarity=0.103 Sum_probs=129.4
Q ss_pred HhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccc
Q 021653 48 YLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQ 127 (309)
Q Consensus 48 yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (309)
.+.+++|.+..+.+...+.+.++..++.++.|.++||+ |||+.+.++.++..++.++...+.
T Consensus 38 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~----------------- 99 (406)
T PRK15402 38 AVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAFFILTCLAILLAQ----------------- 99 (406)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHc-----------------
Confidence 35578999999999999999999999999999999996 999999999998888888877665
Q ss_pred cccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccccchh
Q 021653 128 EANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGW 207 (309)
Q Consensus 128 ~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~ 207 (309)
+.+.+++.|++.|++.+...+....++.|.+|++ +|.+..++.+....+|..++|.+.+++.+..+|++
T Consensus 100 -----~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~ 168 (406)
T PRK15402 100 -----SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEA------DAIKITALMANVALLAPLLGPLVGAALIHVLPWRG 168 (406)
T ss_pred -----cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccH
Confidence 6778889999999999988888889999999876 67777888777778899999999999988889999
Q ss_pred hhhHHHHHHHHHHHHHHHhCc
Q 021653 208 GLGIPTFAMFLSIIAFLIGYP 228 (309)
Q Consensus 208 ~f~i~~~~~~~~~~~~~~~~~ 228 (309)
.|++.+++.++..+..+...|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~ 189 (406)
T PRK15402 169 MFVLFAALAALSFFGLWRAMP 189 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCC
Confidence 998877776665554433333
No 25
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.72 E-value=8.2e-16 Score=144.09 Aligned_cols=174 Identities=14% Similarity=0.140 Sum_probs=146.0
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHH
Q 021653 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI 97 (309)
Q Consensus 18 ~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~ 97 (309)
+.+|..........+++.+..+......+ .+.+++|+++.+.+.+.+...++..++.++.|+++||+ |||+++.++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 88 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAP-RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVA 88 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHH
Confidence 34566666666666666666655555444 55678999999999999999999999999999999996 99999999998
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHH
Q 021653 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (309)
Q Consensus 98 l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 177 (309)
+..++.+++.++. +...+++.|++.|++.+...+....+++|.+|++ +|++.
T Consensus 89 ~~~~~~~~~~~~~----------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~ 140 (406)
T PRK11551 89 LFGLFSLATAQAW----------------------DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPR------LRGTA 140 (406)
T ss_pred HHHHHHHHHHHhc----------------------cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHH------HHHHH
Confidence 8888887777665 7788899999999999999999999999999876 79999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHH
Q 021653 178 FNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSII 221 (309)
Q Consensus 178 ~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~ 221 (309)
.++++.+.++|..+++.+...+.+..+|+..|++.+++.++..+
T Consensus 141 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (406)
T PRK11551 141 VSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVP 184 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988888888999999887765554443
No 26
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.72 E-value=1.2e-15 Score=139.68 Aligned_cols=173 Identities=14% Similarity=0.086 Sum_probs=142.9
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Q 021653 27 IFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICL 106 (309)
Q Consensus 27 i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~ 106 (309)
++...++..+........++.|.. +++.+..+.+.+.+...++..++.++.|+++||+ |||+++.++.++..++.++.
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHHH
Confidence 344555555655555666777665 6899999999999999999999999999999996 99999999998888887777
Q ss_pred HHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHH
Q 021653 107 TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 186 (309)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~ 186 (309)
......+ ..+.+.+++++++.|++.+...+...++++|.+|++ +|++..++++.+.+
T Consensus 82 ~~~~~~~-----------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 138 (365)
T TIGR00900 82 PFVALLG-----------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEE------QLTQANSLSQAVRS 138 (365)
T ss_pred HHHHHcC-----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH------HHHHHHhHHHHHHH
Confidence 6654111 126788899999999999999999999999999977 79999999999999
Q ss_pred HHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHH
Q 021653 187 AAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFL 224 (309)
Q Consensus 187 iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~ 224 (309)
+|..+++.+.+++.+..||++.|++.++..++..+..+
T Consensus 139 ~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 176 (365)
T TIGR00900 139 LFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIV 176 (365)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998889999999887776655544433
No 27
>PRK10504 putative transporter; Provisional
Probab=99.72 E-value=1.5e-15 Score=145.20 Aligned_cols=177 Identities=14% Similarity=0.111 Sum_probs=149.0
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g 102 (309)
..+.+.+..++..+..+.+...+|.+. +++|.+..+.+++.+.+.++..++.+++|+++||+ |||++++.+.++..++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~ 88 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMA-QSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFTLG 88 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHH-HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHH
Confidence 456666667777777777777777776 47999999999999999999999999999999996 9999999998888888
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHH
Q 021653 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (309)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~ 182 (309)
.++..++. +...++++|++.|+|.|...+....++.|.+|++ +|++..+++.
T Consensus 89 ~~~~~~~~----------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 140 (471)
T PRK10504 89 SLFCALSG----------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPRE------QYMAAMTFVT 140 (471)
T ss_pred HHHHHHhC----------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHH------HHHHHHHHHH
Confidence 87766654 6778889999999999999999999999999876 7899999999
Q ss_pred HHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHhCcc
Q 021653 183 FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPL 229 (309)
Q Consensus 183 ~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~ 229 (309)
...++|..++|.+.+++.+..||++.|.+......+..++.....|+
T Consensus 141 ~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 141 LPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred HHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999998776665555554444444
No 28
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.71 E-value=9.3e-16 Score=143.02 Aligned_cols=177 Identities=12% Similarity=0.113 Sum_probs=147.3
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g 102 (309)
.++.+.+..++.....+.....++ .+.+++|++..+.+.+.+.+..+..+++++.|+++||+ |||+++.++.++..++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~ 81 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLT-ELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVIG 81 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChH-HHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHHH
Confidence 345555566666666555555555 45679999999999999999999999999999999996 9999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHH
Q 021653 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (309)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~ 182 (309)
.+++..+. +.+.+++.|++.|++.|...+....+..|.+|++ +|++..+.+.
T Consensus 82 ~~l~~~~~----------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 133 (382)
T PRK10091 82 NAMFTLSS----------------------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPG------KVTAAVAGMV 133 (382)
T ss_pred HHHHHHhC----------------------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChH------HhhHHHHHHH
Confidence 98888776 7889999999999999998888888889998876 6888889888
Q ss_pred HHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHhCcc
Q 021653 183 FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPL 229 (309)
Q Consensus 183 ~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~ 229 (309)
.+.++|..+++.+.+++.+..+||+.|++.+++.++..+..+...|+
T Consensus 134 ~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~ 180 (382)
T PRK10091 134 SGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPD 180 (382)
T ss_pred HHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 89999999999999999888999999999887666555444333443
No 29
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.71 E-value=1.7e-15 Score=141.74 Aligned_cols=179 Identities=12% Similarity=0.039 Sum_probs=146.5
Q ss_pred CccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHH
Q 021653 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (309)
Q Consensus 20 ~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~ 99 (309)
.++.+..+.+..++..+........++.|+++++|.|..+.+.+.+.+.++..++.++.|+++||+ |||+++.++.+++
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~ 91 (399)
T PRK05122 13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGC 91 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHH
Confidence 345566666777777777766777888899999999999999999999999999999999999996 9999999999988
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHH
Q 021653 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (309)
Q Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~ 179 (309)
.++.+.+.++...... ...+...+++.|++.|+|.+...+....+..|..|++ +|++..+
T Consensus 92 ~~~~~~~~~~~~~~~~--------------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~~ 151 (399)
T PRK05122 92 ALSGLLYLLAGLLAAW--------------PVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGAL------HTGRVIS 151 (399)
T ss_pred HHHHHHHHHhhhhhcc--------------chhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChh------hhccchh
Confidence 8877666554311100 0114667889999999999999999999999999877 6899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHH
Q 021653 180 WYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLS 219 (309)
Q Consensus 180 ~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~ 219 (309)
++..+.++|..+++.+++++.+..||+..+++..++.++.
T Consensus 152 ~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~ 191 (399)
T PRK05122 152 WNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLG 191 (399)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 9888899999999999999988899998887766554433
No 30
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.71 E-value=1.6e-15 Score=143.84 Aligned_cols=169 Identities=15% Similarity=0.165 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHhhHHHHHHHhHHhcC---CCHHHHHH---HHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHH
Q 021653 29 SNEVCEKLAVVGFNTNMISYLTTQLH---MPLTKAAN---TLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (309)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~---~s~~~~~~---~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g 102 (309)
+..+++.+.... ...+..++.++++ .+..+.+. +.+...++..++++++|+++||+ |||+++.++.+++.++
T Consensus 29 ~~~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~~~~~~~ 106 (432)
T PRK10406 29 SGNLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISVCMMCFG 106 (432)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHH
Confidence 334455554443 4455667777874 55554333 33444455558999999999996 9999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHH
Q 021653 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (309)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~ 182 (309)
.++..++...... .......+++.|+++|+|.|+..+....+++|.+|++ +|+...+..+
T Consensus 107 ~~~~~~~~~~~~~--------------~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~------~rg~~~~~~~ 166 (432)
T PRK10406 107 SLVIACLPGYETI--------------GTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEG------RKGFYASFQY 166 (432)
T ss_pred HHHHhhcCCchhH--------------HHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCC------cccHHHHHHH
Confidence 9888765411000 0013457889999999999999999999999999987 6898888888
Q ss_pred HHHHHHHHHHHHHHHHhh--------ccccchhhhhHHHHHHHHH
Q 021653 183 FVMGAAILVAVTVLVYIQ--------DNIGWGWGLGIPTFAMFLS 219 (309)
Q Consensus 183 ~~~~iG~~l~~~~~~~i~--------~~~gw~~~f~i~~~~~~~~ 219 (309)
.+.+.|..+++.+...+. +..|||++|++.++..++.
T Consensus 167 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 167 VTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 888888888876654443 2579999999877655544
No 31
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.71 E-value=2.1e-15 Score=141.01 Aligned_cols=173 Identities=12% Similarity=0.090 Sum_probs=141.6
Q ss_pred CCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHH
Q 021653 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (309)
Q Consensus 19 ~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l 98 (309)
+.+|..+.+.....+..+........++ ++.+++|+|+.+.+.+.+.+.++..++.++.|+++||+ |||+++.++.++
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~-~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~ 82 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPAIA-DMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSI 82 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHH
Confidence 3466666666666666655544444444 45678999999999999999999999999999999996 999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHH
Q 021653 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (309)
Q Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~ 178 (309)
..++.+++..+. +...+++.|++.|++.+...+....+..|.++.+ +++...
T Consensus 83 ~~~~~~~~~~~~----------------------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 134 (394)
T PRK11652 83 FILGTLVALFAH----------------------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGT------QLRHAN 134 (394)
T ss_pred HHHHHHHHHHHc----------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHH------HHHHHH
Confidence 888888777655 6788899999999999888777778888888765 688888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHH
Q 021653 179 NWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSII 221 (309)
Q Consensus 179 ~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~ 221 (309)
+++..+..+|..++|.+.+++.+..||++.|++.++..++..+
T Consensus 135 ~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~ 177 (394)
T PRK11652 135 SLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTF 177 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH
Confidence 8888999999999999999998888999999887766554433
No 32
>TIGR00895 2A0115 benzoate transport.
Probab=99.71 E-value=1.4e-15 Score=140.98 Aligned_cols=174 Identities=12% Similarity=0.092 Sum_probs=141.4
Q ss_pred CCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHH
Q 021653 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (309)
Q Consensus 19 ~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l 98 (309)
..|+.........+...+..+. .....+++.+++|++..+.+.+.+...++..++.++.|+++||+ |||+.+.++.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~ 91 (398)
T TIGR00895 14 YQWRAIILSFLIMLMDGYDLAA-MGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILL 91 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-HHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHH
Confidence 3455444444444444444433 33445566778999999999999999999999999999999996 999999999988
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHH
Q 021653 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (309)
Q Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~ 178 (309)
..++.+++.... +.+.+++.+++.|++.+...+....+++|.+|++ +|++..
T Consensus 92 ~~~~~~~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~r~~~~ 143 (398)
T TIGR00895 92 FSVFTLLCALAT----------------------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKR------FRGTAV 143 (398)
T ss_pred HHHHHHHHHHcc----------------------chHHHHHHHHHHhcccccchhhHHHHHHHHcCHH------hhchhH
Confidence 888887777655 6778889999999999999999999999999976 799999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHH
Q 021653 179 NWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (309)
Q Consensus 179 ~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~ 222 (309)
++++.+.++|..+++.+.+++.+..||+..|++.+++..+..++
T Consensus 144 ~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 187 (398)
T TIGR00895 144 GLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLL 187 (398)
T ss_pred hhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHH
Confidence 99999999999999999999999999999998876554444333
No 33
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.71 E-value=1.1e-15 Score=144.13 Aligned_cols=168 Identities=13% Similarity=0.163 Sum_probs=142.8
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHH
Q 021653 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI 97 (309)
Q Consensus 18 ~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~ 97 (309)
+.+|+......+..+...+..+.. ..+..++++++|+++.+.+.+.+.+.++..+++++.|+++||+ |||+++.++.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~ 91 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIV 91 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHH
Confidence 344555555555555555555443 3444567789999999999999999999999999999999996 99999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHH
Q 021653 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (309)
Q Consensus 98 l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 177 (309)
+..++.+++.++. +.+.++++|++.|+|.|...+....++.|.+|++ +|++.
T Consensus 92 ~~~~~~~~~~~~~----------------------~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~------~r~~~ 143 (426)
T PRK12307 92 AYSVGTGLSGLAS----------------------GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKH------LKSKA 143 (426)
T ss_pred HHHHHHHHHHHHh----------------------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHh------HhhHh
Confidence 9999998888877 7888999999999999999999999999999987 79999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHH
Q 021653 178 FNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFA 215 (309)
Q Consensus 178 ~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~ 215 (309)
.++++.+..+|..+++.+.+.+.+..+|++.|++..+.
T Consensus 144 ~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 144 SAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLP 181 (426)
T ss_pred hhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHH
Confidence 99999999999999999988888889999999875543
No 34
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.70 E-value=1.3e-15 Score=144.46 Aligned_cols=164 Identities=15% Similarity=0.127 Sum_probs=138.2
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Q 021653 27 IFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICL 106 (309)
Q Consensus 27 i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~ 106 (309)
.++..++..+..+.....++.+ .+++|++..+.+.+.+.+.++..++.+++|+++||+ |||+++.++.++..++.+++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~ 105 (434)
T PRK11663 28 MYLGYALFYFTRKSFNAAMPEM-LADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGIINILF 105 (434)
T ss_pred HHHHHHHHHHhhhhHHHhhHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHHHHHH
Confidence 3334444444444445555555 457999999999999999999999999999999996 99999999999999998888
Q ss_pred HHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHH
Q 021653 107 TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 186 (309)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~ 186 (309)
..+. +.+.+++.|++.|++.|...+....+++|++|++ +|++..++++.+.+
T Consensus 106 ~~~~----------------------~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~------~rg~~~~~~~~~~~ 157 (434)
T PRK11663 106 GFSS----------------------SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRT------ERGGWWAIWNTAHN 157 (434)
T ss_pred HHHh----------------------HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHH------HHHHHHHHHHHHHH
Confidence 8776 7788888999999999998899999999999976 79999999999999
Q ss_pred HHHHHHHHHHHHhhccccchhhhhHHHHHHHHHH
Q 021653 187 AAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSI 220 (309)
Q Consensus 187 iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~ 220 (309)
+|..+++.+.+++.+..|||+.|++.+++.++..
T Consensus 158 ~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~ 191 (434)
T PRK11663 158 VGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVG 191 (434)
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 9999999999999988999999988777654443
No 35
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.70 E-value=1.2e-15 Score=145.99 Aligned_cols=172 Identities=12% Similarity=0.206 Sum_probs=143.5
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Q 021653 25 PFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMI 104 (309)
Q Consensus 25 ~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~ 104 (309)
..+....++..+....... ..+.+.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+.++++.++..++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~-~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNV-AIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHHH
Confidence 3344444444444443333 44556678999999999999999999999999999999996 999999999999999988
Q ss_pred HHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHH
Q 021653 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 184 (309)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~ 184 (309)
++..+. +...++++|++.|+|.+...+....++.|.+|++ +|++..++++..
T Consensus 83 ~~~~~~----------------------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~ 134 (485)
T TIGR00711 83 LCGVAP----------------------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPE------KRGRAMAIWGLT 134 (485)
T ss_pred HHhCcC----------------------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHH------HHHHHHHHHHHH
Confidence 887665 7788999999999999999999999999999976 799999999999
Q ss_pred HHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHh
Q 021653 185 MGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIG 226 (309)
Q Consensus 185 ~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~ 226 (309)
..+|..+++.+.+++.+..+|++.|++.+.+.++..++....
T Consensus 135 ~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~ 176 (485)
T TIGR00711 135 VLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFI 176 (485)
T ss_pred HHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHH
Confidence 999999999999999999999999998776665555444333
No 36
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.69 E-value=1.1e-16 Score=149.07 Aligned_cols=155 Identities=44% Similarity=0.820 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCCh
Q 021653 89 FWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDP 168 (309)
Q Consensus 89 ~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~ 168 (309)
+|++++|.+++++|.+++++++..+. . +++.+.+.++++++++++|.|+.++++.++++||+++++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~-~------------~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~- 66 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPS-L------------PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDD- 66 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSS-C------------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTT-
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcch-h------------hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccc-
Confidence 58999999999999999998883322 2 134467889999999999999999999999999999873
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHhCcceecc-CCCCChhHH-HHHH
Q 021653 169 KQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYRNL-DPAGSPFTR-LLQV 246 (309)
Q Consensus 169 ~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~ 246 (309)
+.+|.++|+|+|+++|+|+++++.+.++++++.||.++|+++++.+++++++++.++++|+.+ +|.+++..+ ...+
T Consensus 67 --~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~~~ 144 (372)
T PF00854_consen 67 --DSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIKLV 144 (372)
T ss_dssp --TTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SHHH
T ss_pred --hhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHHHH
Confidence 338999999999999999999999999999999999999999999999999999999998877 667777776 4455
Q ss_pred HHHHHHcCCCCCC
Q 021653 247 CVAAFRKRKLTMV 259 (309)
Q Consensus 247 ~~~~~~~~~~~~~ 259 (309)
.....+++....|
T Consensus 145 ~~~~~~~~~~~~~ 157 (372)
T PF00854_consen 145 LVAAFKKRKLAVP 157 (372)
T ss_dssp HHHHHHHHCCCH-
T ss_pred HHHHHHHhhcccc
Confidence 5555555555444
No 37
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.69 E-value=2.3e-15 Score=138.37 Aligned_cols=151 Identities=17% Similarity=0.143 Sum_probs=130.6
Q ss_pred HHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 021653 43 TNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEG 122 (309)
Q Consensus 43 ~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 122 (309)
..+.+++.+++|++..+.+.+.+.+.++..++.++.|+++||+ |||+++.++.++..++.+++.++.
T Consensus 23 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~~------------ 89 (377)
T TIGR00890 23 TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIAD------------ 89 (377)
T ss_pred hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHHH------------
Confidence 3456778889999999999999999999999999999999996 999999999999999999888877
Q ss_pred ccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 021653 123 EQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN 202 (309)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~ 202 (309)
+.+.++++|.+.|+|.+...+.......|.+|+ +|++..+++..+.++|..+++.+.+.+.+.
T Consensus 90 ----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 152 (377)
T TIGR00890 90 ----------SLAALYLTYGLASAGVGIAYGIALNTAVKWFPD-------KRGLASGIIIGGYGLGSFILSPLITSVINL 152 (377)
T ss_pred ----------HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCc-------ccHHHHHHHHHhcchhHhHHHHHHHHHHhc
Confidence 888899999999999998888888888888874 588999999999999988776676777777
Q ss_pred ccchhhhhHHHHHHHHHHHHH
Q 021653 203 IGWGWGLGIPTFAMFLSIIAF 223 (309)
Q Consensus 203 ~gw~~~f~i~~~~~~~~~~~~ 223 (309)
.+||+.|++.+++.++..+..
T Consensus 153 ~~~~~~f~~~~~~~~~~~~~~ 173 (377)
T TIGR00890 153 EGVPAAFIYMGIIFLLVIVLG 173 (377)
T ss_pred ccHHHHHHHHHHHHHHHHHHH
Confidence 899999998887766554443
No 38
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.69 E-value=1.5e-15 Score=139.94 Aligned_cols=152 Identities=13% Similarity=0.201 Sum_probs=135.8
Q ss_pred HHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCc
Q 021653 44 NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGE 123 (309)
Q Consensus 44 ~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 123 (309)
...+++.+++|++..+.+.+.+.+.++..++.++.|+++||+ |||+++.++.++..++.+++.++.
T Consensus 15 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~------------- 80 (399)
T TIGR00893 15 FAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFAG------------- 80 (399)
T ss_pred HhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHHc-------------
Confidence 344567889999999999999999999999999999999996 999999999999999988888776
Q ss_pred cccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 021653 124 QVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNI 203 (309)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~ 203 (309)
+.+.++++|++.|+|.+...+....++.|.+|++ +|++..++++...++|..+++.+.+++.+..
T Consensus 81 ---------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 145 (399)
T TIGR00893 81 ---------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPAS------ERATAVSIFNSAQGLGGIIGGPLVGWILIHF 145 (399)
T ss_pred ---------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHH------HHHHHHHHHHHhchHHHHHHHHHHHHHHHhC
Confidence 7888999999999999999999999999999976 7999999999999999999999999988889
Q ss_pred cchhhhhHHHHHHHHHHHHHH
Q 021653 204 GWGWGLGIPTFAMFLSIIAFL 224 (309)
Q Consensus 204 gw~~~f~i~~~~~~~~~~~~~ 224 (309)
+|++.|++.+++.++..++.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~ 166 (399)
T TIGR00893 146 SWQWAFIIEGVLGIIWGVLWL 166 (399)
T ss_pred CchHHHHHHHHHHHHHHHHhh
Confidence 999999988776665544433
No 39
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.68 E-value=5.5e-15 Score=142.15 Aligned_cols=169 Identities=12% Similarity=0.184 Sum_probs=142.1
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHH
Q 021653 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI 97 (309)
Q Consensus 18 ~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~ 97 (309)
+.+|+....+.+..++..+...... .+..++.+++|++..+.+.+.+.+.++..++.++.|+++||+ |||++++++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 93 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLIT-LVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 3455555555555555555544443 444567789999999999999999999999999999999996 99999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHH
Q 021653 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (309)
Q Consensus 98 l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 177 (309)
+..++.+++.++. +.+.++++|++.|++.++..+....++.|.+|++ +|+..
T Consensus 94 ~~~~~~~~~~~~~----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~ 145 (496)
T PRK03893 94 LFSVGTLACGFAP----------------------GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKH------LRNKA 145 (496)
T ss_pred HHHHHHHHHHHHh----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH------HHHHH
Confidence 9999988888776 7888999999999999999999999999999976 78999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHH
Q 021653 178 FNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAM 216 (309)
Q Consensus 178 ~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~ 216 (309)
.+.++.+.++|..+++.+.+++.+..+|++.|++.++..
T Consensus 146 ~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~ 184 (496)
T PRK03893 146 SGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPI 184 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999988754433
No 40
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.68 E-value=7.2e-15 Score=135.40 Aligned_cols=164 Identities=15% Similarity=0.197 Sum_probs=128.9
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Q 021653 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (309)
Q Consensus 24 ~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~ 103 (309)
.+...+..++.....+.....+|.++++++|++..+.+.+.+...++..+++++.|+++||+ |||+.+.++.++..++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIPC 81 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 34445555555666666677777679999999999999999999999999999999999996 99999999999999988
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHH
Q 021653 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (309)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~ 183 (309)
+++..+. .+.+.++++|++.|++.+. .+....+++|.+|++ +|+...+++..
T Consensus 82 ~~~~~~~---------------------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~------~r~~~~~~~~~ 133 (366)
T TIGR00886 82 LWAGLAV---------------------QSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKK------IQGTALGLAAG 133 (366)
T ss_pred HHHHHHh---------------------hhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHh------hhhHHHHHHHH
Confidence 8777654 0567788899999998665 456678899999876 68999998887
Q ss_pred HHHHHHHHHHHHHHHhhc----------cccchhhhhH-HHHHH
Q 021653 184 VMGAAILVAVTVLVYIQD----------NIGWGWGLGI-PTFAM 216 (309)
Q Consensus 184 ~~~iG~~l~~~~~~~i~~----------~~gw~~~f~i-~~~~~ 216 (309)
..++|..+++.+.+.+.. ..+|++.|++ .+++.
T Consensus 134 ~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 177 (366)
T TIGR00886 134 WGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGIL 177 (366)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHH
Confidence 777787777766655443 3489999843 34433
No 41
>PRK03699 putative transporter; Provisional
Probab=99.67 E-value=1e-14 Score=136.58 Aligned_cols=175 Identities=11% Similarity=0.126 Sum_probs=142.2
Q ss_pred CCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHH
Q 021653 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (309)
Q Consensus 19 ~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l 98 (309)
++||..+...+..++.....+.....++. +.+++|+|..+.+.+.+.+.++..++.+++|+++||+ |||+++.++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~ 81 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGP-IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFAL 81 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHH
Confidence 44566666656666665555555555554 5678999999999999999999999999999999996 999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHH
Q 021653 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (309)
Q Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~ 178 (309)
..++.+++.++. +...+++.|++.|++.|...+....++.|.+|++ +|+...
T Consensus 82 ~~i~~~l~~~~~----------------------~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~------~r~~~~ 133 (394)
T PRK03699 82 MILAVAGLMFSH----------------------SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGK------QRGSRL 133 (394)
T ss_pred HHHHHHHHHHcc----------------------hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccc------hHHHHH
Confidence 988888887765 7788899999999999998888889999999876 688888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-ccccchhhhhHHHHHHHHHHHHH
Q 021653 179 NWYYFVMGAAILVAVTVLVYIQ-DNIGWGWGLGIPTFAMFLSIIAF 223 (309)
Q Consensus 179 ~~~~~~~~iG~~l~~~~~~~i~-~~~gw~~~f~i~~~~~~~~~~~~ 223 (309)
+..+...++|+.++|.+.+++. +..|||+.|.+.+++.++..++.
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK03699 134 LFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILT 179 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 8888888889999998888765 46799999988777665544433
No 42
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.67 E-value=5.4e-15 Score=138.53 Aligned_cols=151 Identities=15% Similarity=0.147 Sum_probs=130.1
Q ss_pred HhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 021653 39 VGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPP 118 (309)
Q Consensus 39 ~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~ 118 (309)
+.+...+| .+.+++|+|..+.+++.+.+.++..+++++.|+++||+ |||+++..+..++.++.++..++.
T Consensus 26 ~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a~-------- 95 (393)
T PRK09705 26 TSVGPLLP-QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELYP-------- 95 (393)
T ss_pred hccchhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHCc--------
Confidence 44444444 56689999999999999999999999999999999996 999999999999999999999877
Q ss_pred CCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 021653 119 PCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVY 198 (309)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~ 198 (309)
+...++++|++.|+|.+...+..+.++.|.+| + +|+...+.+..+.++|..+++.+.++
T Consensus 96 --------------~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~------~~~~~~g~~~~~~~~g~~~g~~~~~~ 154 (393)
T PRK09705 96 --------------QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-Q------RTPLVMGLWSAALMGGGGLGAAITPW 154 (393)
T ss_pred --------------chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-c------cchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 77788999999999999999999999999987 4 58999999999999999999999988
Q ss_pred hhccc-cchhhhhHHHHHHHHHH
Q 021653 199 IQDNI-GWGWGLGIPTFAMFLSI 220 (309)
Q Consensus 199 i~~~~-gw~~~f~i~~~~~~~~~ 220 (309)
+.+.. +||..+.+.++..++.+
T Consensus 155 l~~~~~~w~~~~~~~~~~~~~~~ 177 (393)
T PRK09705 155 LVQHSETWYQTLAWWALPAVVAL 177 (393)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHH
Confidence 87765 89988766555444433
No 43
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.67 E-value=6.4e-15 Score=142.37 Aligned_cols=190 Identities=15% Similarity=0.106 Sum_probs=137.9
Q ss_pred CccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHh-----cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHH
Q 021653 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQ-----LHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITI 94 (309)
Q Consensus 20 ~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~-----~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i 94 (309)
+++.+.++.+..+...+....+...++. +..+ .+.+..+.+.+.+...++..++.+++|+++||+ |||+++.+
T Consensus 14 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~ 91 (502)
T TIGR00887 14 HFRAIVIAGVGFFTDSYDLFCISLVTKM-LGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGM 91 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHH
Confidence 3444444444455554444333333333 3322 235566778899999999999999999999996 99999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhh
Q 021653 95 ASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKT 174 (309)
Q Consensus 95 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r 174 (309)
+.++..++.+++.++... ....+...++++|++.|+|.|+..+..+.+++|.+|++ .|
T Consensus 92 ~~~~~~v~~~~~~~~~~~----------------~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~------~R 149 (502)
T TIGR00887 92 ELIIMIIATVASGLSPGS----------------SPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKK------WR 149 (502)
T ss_pred HHHHHHHHHHHHHHccCc----------------ccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChh------hH
Confidence 999999998877765400 00113678999999999999999999999999999998 79
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhc-----------------------cccchhhhhHHHHHHHHHHH--HHHHhCcc
Q 021653 175 WKYFNWYYFVMGAAILVAVTVLVYIQD-----------------------NIGWGWGLGIPTFAMFLSII--AFLIGYPL 229 (309)
Q Consensus 175 ~~~~~~~~~~~~iG~~l~~~~~~~i~~-----------------------~~gw~~~f~i~~~~~~~~~~--~~~~~~~~ 229 (309)
++..++++....+|..+++.+...+.. ..+||+.|.+.++..++..+ .+.+++|+
T Consensus 150 g~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr 229 (502)
T TIGR00887 150 GAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPR 229 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHH
Confidence 999999999999999888877654321 24799999876665544433 34567777
Q ss_pred eecc
Q 021653 230 YRNL 233 (309)
Q Consensus 230 ~~~~ 233 (309)
|...
T Consensus 230 ~l~~ 233 (502)
T TIGR00887 230 YTAD 233 (502)
T ss_pred HHHH
Confidence 7543
No 44
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.67 E-value=2.3e-15 Score=142.58 Aligned_cols=140 Identities=21% Similarity=0.290 Sum_probs=120.8
Q ss_pred CCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhH
Q 021653 55 MPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQV 134 (309)
Q Consensus 55 ~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (309)
.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.++..... ...+.
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~ 127 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAA-------------------FALSV 127 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhc-------------------cccch
Confidence 3388999999999999999999999999996 999999999999999988886654 11245
Q ss_pred HHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHH---HHhhccccchhhhhH
Q 021653 135 AILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVL---VYIQDNIGWGWGLGI 211 (309)
Q Consensus 135 ~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~---~~i~~~~gw~~~f~i 211 (309)
+.++++|++.|+|.|...+....+++|.+|++ +|+...++++.+.++|..+++.+. ....+..+||+.|++
T Consensus 128 ~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~ 201 (481)
T TIGR00879 128 EMLIVGRVLLGIGVGIASALVPMYLSEIAPKA------LRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGL 201 (481)
T ss_pred HHHHHHHHHHHhhhhHHHhHHHHHHHccCChh------hhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHH
Confidence 67899999999999999999999999999987 799999999999999999999988 666677899999998
Q ss_pred HHHHHHHHH
Q 021653 212 PTFAMFLSI 220 (309)
Q Consensus 212 ~~~~~~~~~ 220 (309)
.++..++.+
T Consensus 202 ~~~~~~~~~ 210 (481)
T TIGR00879 202 QLIPAGLLF 210 (481)
T ss_pred HHHHHHHHH
Confidence 665554443
No 45
>PRK11043 putative transporter; Provisional
Probab=99.67 E-value=1.1e-14 Score=136.50 Aligned_cols=162 Identities=16% Similarity=0.207 Sum_probs=134.2
Q ss_pred HHHHHHhhHHHHHHH--hHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhh
Q 021653 34 EKLAVVGFNTNMISY--LTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAI 111 (309)
Q Consensus 34 ~~~~~~~~~~~l~~y--l~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~ 111 (309)
....++.....+|.+ +++++|.+..+.+.+.+.+.++..++.++.|+++||+ |||+.+.++.++..++.++...+.
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~- 92 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWVE- 92 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHhc-
Confidence 333444444445544 6789999999999999999999999999999999996 999999999988888888777665
Q ss_pred cCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHH
Q 021653 112 LPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILV 191 (309)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l 191 (309)
+.+.++++|++.|+|.+...+....+..|.++++ ++++.++..+...++|..+
T Consensus 93 ---------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 145 (401)
T PRK11043 93 ---------------------SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQ------KANRVFATIMPLVALSPAL 145 (401)
T ss_pred ---------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcH------HHHHHHHHHHHHHHHHHHH
Confidence 6788889999999998888877788899999876 5777788887788899999
Q ss_pred HHHHHHHhhccccchhhhhHHHHHHHHHHHHHH
Q 021653 192 AVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFL 224 (309)
Q Consensus 192 ~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~ 224 (309)
+|.+.+++.+..||+..|++.+++.++..+..+
T Consensus 146 g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 178 (401)
T PRK11043 146 APLLGAWLLNHFGWQAIFATLFAITLLLILPTL 178 (401)
T ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888776665554433
No 46
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.67 E-value=1.1e-14 Score=140.02 Aligned_cols=175 Identities=9% Similarity=0.064 Sum_probs=131.8
Q ss_pred CCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHH
Q 021653 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (309)
Q Consensus 19 ~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l 98 (309)
++++.........++..+..+.+.. +..++.+++|++..+.+.+.+.+..+..++.+++|+++||+ |||+++..+.++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~ 110 (476)
T PLN00028 33 PHMRAFHLSWISFFTCFVSTFAAAP-LLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLML 110 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHH
Confidence 3445555555555555555554443 34467789999999999998889999999999999999996 999999999988
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHH
Q 021653 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (309)
Q Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~ 178 (309)
..++.++..++. +...+++.|++.|++.+... ....+++|.+|++ +|+...
T Consensus 111 ~~~~~~~~~~~~----------------------s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~------~rg~a~ 161 (476)
T PLN00028 111 TAPAVFCMSLVS----------------------SATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGK------IVGTAN 161 (476)
T ss_pred HHHHHHHHHHhc----------------------CHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChh------heeHHH
Confidence 888888777765 67778889999999988654 3456789999977 799999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh----c-----cccchhhhhHHHHHHHHHHHHHH
Q 021653 179 NWYYFVMGAAILVAVTVLVYIQ----D-----NIGWGWGLGIPTFAMFLSIIAFL 224 (309)
Q Consensus 179 ~~~~~~~~iG~~l~~~~~~~i~----~-----~~gw~~~f~i~~~~~~~~~~~~~ 224 (309)
+..+...++|+.+++.+.+.+. + ..|||+.|++.+++.++..++.+
T Consensus 162 g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~ 216 (476)
T PLN00028 162 GIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVL 216 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHH
Confidence 9887777777777665544332 2 25899999998877665544433
No 47
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.67 E-value=5.2e-15 Score=143.45 Aligned_cols=149 Identities=17% Similarity=0.244 Sum_probs=125.9
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHH
Q 021653 59 KAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILY 138 (309)
Q Consensus 59 ~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (309)
+.+++.+.+.+++.+++++.|.++|++ |||++++++.+++.+|.++++.+. +..+++
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a~----------------------~~~~l~ 146 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALAP----------------------SWYQLI 146 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhh----------------------hHHHHH
Confidence 448999999999999999999999996 999999999999999999999998 899999
Q ss_pred HHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchhhhhHHHHHHH
Q 021653 139 VSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN-IGWGWGLGIPTFAMF 217 (309)
Q Consensus 139 ~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~-~gw~~~f~i~~~~~~ 217 (309)
++|++.|+|.|+...++|.|++|..|++ .||...+.+++..++|.+++..+.....+. .+||..+++..+..+
T Consensus 147 ~GR~l~G~g~G~~~~~~piy~sEiap~~------~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~ 220 (513)
T KOG0254|consen 147 VGRILTGLGVGGASVLAPVYISEIAPAH------IRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAV 220 (513)
T ss_pred HHHHHhccchhhhhhcchhhHhhcCChh------hhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHH
Confidence 9999999999999999999999999988 799999999999999999995554444433 589988776555444
Q ss_pred HHH--HHHHHhCcceeccCCC
Q 021653 218 LSI--IAFLIGYPLYRNLDPA 236 (309)
Q Consensus 218 ~~~--~~~~~~~~~~~~~~~~ 236 (309)
+.. +.+.+++|+|..++.+
T Consensus 221 ~~~~~~~~~pesp~~L~~~g~ 241 (513)
T KOG0254|consen 221 ILALGMLFLPESPRWLIEKGR 241 (513)
T ss_pred HHHHHHHhCCCChHHHHHcCC
Confidence 333 3444577887665433
No 48
>PRK10133 L-fucose transporter; Provisional
Probab=99.66 E-value=2e-14 Score=136.69 Aligned_cols=153 Identities=13% Similarity=0.035 Sum_probs=120.3
Q ss_pred CccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHH
Q 021653 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (309)
Q Consensus 20 ~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~ 99 (309)
.+..++.+..+.+...+........+| .+++++|.++.+.+.+.+.+.++..+++++.|+++||+ |||+++.++.+++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~~ 101 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLP-QFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLY 101 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHH
Confidence 344555555555555555544444444 55899999999999999999999999999999999996 9999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHH
Q 021653 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (309)
Q Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~ 179 (309)
.++.+++..... ..+...++++|+++|+|.|...+...++++|..+++ ++....+
T Consensus 102 ~~~~~l~~~~~~-------------------a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~------~~~~~~s 156 (438)
T PRK10133 102 ALGAALFWPAAE-------------------IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPES------SGHFRLN 156 (438)
T ss_pred HHHHHHHHHHHh-------------------cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChh------hHHHHHH
Confidence 999987643220 117788999999999999999999999999875554 4555577
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 021653 180 WYYFVMGAAILVAVTVLVYI 199 (309)
Q Consensus 180 ~~~~~~~iG~~l~~~~~~~i 199 (309)
.++....+|..+++.+++.+
T Consensus 157 ~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 157 LAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 77788888888888776544
No 49
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.66 E-value=1.6e-14 Score=134.82 Aligned_cols=163 Identities=11% Similarity=0.087 Sum_probs=135.1
Q ss_pred HHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH
Q 021653 30 NEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTIS 109 (309)
Q Consensus 30 ~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~ 109 (309)
..+....+.......+| .+.+++|.+..+.+...+.+..+..++.++.|+++||+ |||+.+.++.++..++.+++..+
T Consensus 11 ~~~~~~~~~~~~~~~lp-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~~~~~~ 88 (392)
T PRK10473 11 LVLLYPAGIDMYLVGLP-RIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASLLCSLA 88 (392)
T ss_pred HHHHHHHHHHHHhhhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHHHHHHh
Confidence 33334444333334444 45678999999999999999999999999999999996 99999999999998888887765
Q ss_pred hhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHH
Q 021653 110 AILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAI 189 (309)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~ 189 (309)
. +...++++|++.|++.+...+....++.|.+|++ +|++..++.+...++|.
T Consensus 89 ~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~i~~ 140 (392)
T PRK10473 89 E----------------------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDR------RRAKVLSLLNGITCIIP 140 (392)
T ss_pred C----------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHH
Confidence 5 6677888999999999998888999999999977 79999999999999999
Q ss_pred HHHHHHHHHhhccccchhhhhHHHHHHHHHHHH
Q 021653 190 LVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (309)
Q Consensus 190 ~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~ 222 (309)
.++|.+.+.+.+..+|++.|++.+++.++..++
T Consensus 141 ~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~ 173 (392)
T PRK10473 141 VLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLL 173 (392)
T ss_pred HHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHH
Confidence 999999888888889999998887766555444
No 50
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.66 E-value=2e-14 Score=134.45 Aligned_cols=174 Identities=14% Similarity=0.028 Sum_probs=139.3
Q ss_pred CccH-HHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHH-----HHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHH
Q 021653 20 GMIT-MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTK-----AANTLTNFGGTGSLTPLIGAFVADAYAGRFWTIT 93 (309)
Q Consensus 20 ~~~~-~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~-----~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~ 93 (309)
.|+. ...++...++...++......++.|.+ ++|++..+ .+.+.+...+...++.++.|+++||+ |||+.+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~ 88 (408)
T PRK09874 11 NWKRNLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLL 88 (408)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHH
Confidence 3433 444556666777777767777888875 68888654 37778888999999999999999996 9999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhh
Q 021653 94 IASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATK 173 (309)
Q Consensus 94 i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~ 173 (309)
.+.++..++.+++.... +.+.+++.|++.|++.+ ..+....+..|.+|++ +
T Consensus 89 ~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~------~ 139 (408)
T PRK09874 89 RSALGMGIVMVLMGLAQ----------------------NIWQFLILRALLGLLGG-FVPNANALIATQVPRN------K 139 (408)
T ss_pred HHHHHHHHHHHHHHHHh----------------------hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHh------h
Confidence 99988888888777655 77888899999998765 4566677888888876 7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHH
Q 021653 174 TWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFL 224 (309)
Q Consensus 174 r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~ 224 (309)
|++..+.++...++|..+++.+.+.+.+..+|+..|++.+++.++..+..+
T Consensus 140 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (408)
T PRK09874 140 SGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTL 190 (408)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999998888999999888877665554433
No 51
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.66 E-value=1.1e-14 Score=134.97 Aligned_cols=154 Identities=14% Similarity=0.165 Sum_probs=134.4
Q ss_pred HHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 021653 42 NTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCE 121 (309)
Q Consensus 42 ~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~ 121 (309)
...++.+. +++|+++.+.+.+.+.+.++..++.++.|+++||+ |||+++.++.++..++.+++....
T Consensus 11 ~p~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~~----------- 77 (377)
T PRK11102 11 LPALPVIA-ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALAQ----------- 77 (377)
T ss_pred hccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHHc-----------
Confidence 34555555 57999999999999999999999999999999996 999999999999999988887766
Q ss_pred CccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 021653 122 GEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD 201 (309)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~ 201 (309)
+.+.+++.+++.|++.+...+....++.|.+|++ +|++..++++....+|..+++.+.+++.+
T Consensus 78 -----------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 140 (377)
T PRK11102 78 -----------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKE------EFSRMMSFVTLVMTIAPLLAPIIGGWLLV 140 (377)
T ss_pred -----------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6778889999999999999999999999999876 79999999999999999999999999998
Q ss_pred cccchhhhhHHHHHHHHHHHHHHH
Q 021653 202 NIGWGWGLGIPTFAMFLSIIAFLI 225 (309)
Q Consensus 202 ~~gw~~~f~i~~~~~~~~~~~~~~ 225 (309)
..+|++.|++.+++.++..++...
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~ 164 (377)
T PRK11102 141 WFSWHAIFWVLALAAILAAALVFF 164 (377)
T ss_pred HcChHHHHHHHHHHHHHHHHHHHH
Confidence 889999998877776665544433
No 52
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.65 E-value=7.2e-15 Score=140.64 Aligned_cols=150 Identities=14% Similarity=0.187 Sum_probs=121.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCccccccccch
Q 021653 54 HMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAIL-PQLRPPPCEGEQVCQEANKG 132 (309)
Q Consensus 54 ~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 132 (309)
+.++.+.+++.+.+.++..++++++|+++||+ |||++++++.+++.++.+..+++... .... .++..
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~-----------~~~~~ 118 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSLKIAAVLFFISALGSAWPEFGFTSIG-----------PDNTG 118 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhcccccccc-----------ccchh
Confidence 88999999999999999999999999999996 99999999999998888777654210 0000 00112
Q ss_pred hHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh--------cccc
Q 021653 133 QVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQ--------DNIG 204 (309)
Q Consensus 133 ~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~--------~~~g 204 (309)
....++++|++.|++.|+..+..+.+++|.+|++ +|+...+.+..+..+|..+++.+...+. +..|
T Consensus 119 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~------~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g 192 (479)
T PRK10077 119 YVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAH------IRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDG 192 (479)
T ss_pred HHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChh------hhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCC
Confidence 4567889999999999999999999999999987 7999999999999999998877655442 3568
Q ss_pred chhhhhHHHHHHHHHHH
Q 021653 205 WGWGLGIPTFAMFLSII 221 (309)
Q Consensus 205 w~~~f~i~~~~~~~~~~ 221 (309)
||+.|++.++..++..+
T Consensus 193 Wr~~f~~~~~~~~~~~~ 209 (479)
T PRK10077 193 WRYMFASEAIPALLFLM 209 (479)
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 99999887766655443
No 53
>PRK09952 shikimate transporter; Provisional
Probab=99.65 E-value=1.1e-14 Score=138.55 Aligned_cols=177 Identities=10% Similarity=0.073 Sum_probs=125.2
Q ss_pred CccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhc--CCCHHHHHHHH-----HHHHHHHHhHHHHHHHHHHhccchHHHH
Q 021653 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQL--HMPLTKAANTL-----TNFGGTGSLTPLIGAFVADAYAGRFWTI 92 (309)
Q Consensus 20 ~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~--~~s~~~~~~~~-----~~~~~~~~~~~l~~G~laD~~~GR~~~i 92 (309)
+|+..+...+..+++.+.........+.+..+++ +.++.. +.+. ++..++..+++++.|+++||+ |||+++
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~~l 97 (438)
T PRK09952 20 ARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHHHH
Confidence 3555555555566666655444434444555555 666653 3332 233455667888899999996 999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhh
Q 021653 93 TIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQAT 172 (309)
Q Consensus 93 ~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~ 172 (309)
.++.+++.++.+++.++.+.... .......+++.|+++|+|.|+..+....+..|.+|++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~------ 157 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTI--------------GWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKN------ 157 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHH--------------HHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCC------
Confidence 99999999999888876511000 0001235788999999999999999999999999987
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhh--------ccccchhhhhHHHHHHHH
Q 021653 173 KTWKYFNWYYFVMGAAILVAVTVLVYIQ--------DNIGWGWGLGIPTFAMFL 218 (309)
Q Consensus 173 ~r~~~~~~~~~~~~iG~~l~~~~~~~i~--------~~~gw~~~f~i~~~~~~~ 218 (309)
+|+...+..+.+..+|..++..+...+. +.+|||..|++.++..++
T Consensus 158 ~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~ 211 (438)
T PRK09952 158 KKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI 211 (438)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH
Confidence 6888888888888888888876655543 257999999887765544
No 54
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.65 E-value=1.6e-14 Score=133.35 Aligned_cols=168 Identities=11% Similarity=0.056 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHH-HHHHHHHHHHHHH
Q 021653 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITI-ASIIYQIGMICLT 107 (309)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i-~~~l~~~g~~~~~ 107 (309)
+..++..++.......++.|+++++|.+..+.+.+.+.+.+...+..++.|.++||+ ||||.+++ +.++..++.++..
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~ 82 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLFA 82 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHHH
Confidence 445566666666778889999999999999999999999999999999999999996 99887665 4444455556655
Q ss_pred HHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhh--HHHHHHHHHH
Q 021653 108 ISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTW--KYFNWYYFVM 185 (309)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~--~~~~~~~~~~ 185 (309)
.+. +.+.+++.+++.+.+.+...+....+..|..|++ +|+ ...+......
T Consensus 83 ~~~----------------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 134 (375)
T TIGR00899 83 WNR----------------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRT------GREAVMFSSVMRAQI 134 (375)
T ss_pred hcc----------------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhc------chhhHHHHHHHHHHH
Confidence 544 6677788888888777777777777777877654 333 3356777778
Q ss_pred HHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHH
Q 021653 186 GAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (309)
Q Consensus 186 ~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~ 225 (309)
++|..+++.+.+++.+..+|++.|++.+++.++..++.+.
T Consensus 135 ~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 135 SLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred hHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999988899999999988776655544433
No 55
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.64 E-value=4.9e-14 Score=132.38 Aligned_cols=171 Identities=13% Similarity=0.151 Sum_probs=135.8
Q ss_pred CCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHH
Q 021653 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (309)
Q Consensus 19 ~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l 98 (309)
+-||+.....+..++..+..+....+++.++ +++|++..+.+.+.+.+.++..++.++.|+++||+ |||+++..+.++
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~~ 87 (402)
T TIGR00897 10 GIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLLL 87 (402)
T ss_pred CCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHH
Confidence 4456677777777777777666667788887 57899999999999999999999999999999996 999999999998
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHH
Q 021653 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (309)
Q Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~ 178 (309)
..++.+++..... ...+...+++.|++.|+|.+...+.....+.+.+|++ +|++..
T Consensus 88 ~~~~~~~~~~~~~------------------~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~------~~g~~~ 143 (402)
T TIGR00897 88 WCVGHAAFIVFGL------------------GHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQD------NLSSAV 143 (402)
T ss_pred HHHHHHHHHHHhc------------------cCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHH------HHHHHH
Confidence 8888765532210 0115667788899999998887777777888888876 799999
Q ss_pred HHHHHHHHHHH-HHHHHHHHHhhccccchhhhhHHHHH
Q 021653 179 NWYYFVMGAAI-LVAVTVLVYIQDNIGWGWGLGIPTFA 215 (309)
Q Consensus 179 ~~~~~~~~iG~-~l~~~~~~~i~~~~gw~~~f~i~~~~ 215 (309)
++++.+.++|. .+++.+.+++.+..||+..++.....
T Consensus 144 g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~ 181 (402)
T TIGR00897 144 GWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAF 181 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 99999999996 57888888888888876655544433
No 56
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.64 E-value=1.9e-15 Score=138.26 Aligned_cols=170 Identities=14% Similarity=0.092 Sum_probs=150.3
Q ss_pred HHHHHHHHHHHHHHHhhHHHH---HHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHH
Q 021653 25 PFIFSNEVCEKLAVVGFNTNM---ISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (309)
Q Consensus 25 ~~i~~~~~~~~~~~~~~~~~l---~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~ 101 (309)
+-++...++...++|.+.-|+ .+++.++.++|..+.+.+.+.+.+++.++-.+.|.++||. +.|..+-++.++..+
T Consensus 28 ~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLilsai 106 (448)
T COG2271 28 IQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLILSAI 106 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHHHHH
Confidence 334455666677777776654 4788889999999999999999999999999999999996 999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHH
Q 021653 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (309)
Q Consensus 102 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~ 181 (309)
..+++.++. +...+.+..++.|+..|.-.|+....++.+++.+ +||+..+.+
T Consensus 107 ~nil~Gfs~----------------------s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~------eRG~~~siW 158 (448)
T COG2271 107 VNILFGFSP----------------------SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRK------ERGTWWSIW 158 (448)
T ss_pred HHHHHhhhh----------------------HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCcc------ccCceEEEe
Confidence 999999887 8888999999999999999999999999999988 799999999
Q ss_pred HHHHHHHHHHHHHHH--HHhhccccchhhhhHHHHHHHHHHHHH
Q 021653 182 YFVMGAAILVAVTVL--VYIQDNIGWGWGLGIPTFAMFLSIIAF 223 (309)
Q Consensus 182 ~~~~~iG~~l~~~~~--~~i~~~~gw~~~f~i~~~~~~~~~~~~ 223 (309)
+.+.|+|+.+.+.+. +++..+.+||.+|++++++.++..++.
T Consensus 159 n~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~ 202 (448)
T COG2271 159 NTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALIL 202 (448)
T ss_pred hhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHH
Confidence 999999999999998 899988999999999999876554443
No 57
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.64 E-value=4.2e-14 Score=131.75 Aligned_cols=158 Identities=14% Similarity=0.110 Sum_probs=134.9
Q ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHH
Q 021653 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (309)
Q Consensus 22 ~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~ 101 (309)
|.++.++...++..+....+...+|.|+. ++|.|..+.+.+.+.+.++..+++++.|+++||+ |||+++.++.++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~~ 83 (381)
T PRK03633 6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFAA 83 (381)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 45677777787888777777788887775 7899999999999999999999999999999996 999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHH
Q 021653 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (309)
Q Consensus 102 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~ 181 (309)
+.++...+. +.+.++++|++.|++.+...+.......|..+++ +|++.++++
T Consensus 84 ~~~~~~~~~----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 135 (381)
T PRK03633 84 GCAGLGLMV----------------------GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSR------NRGRLLAAY 135 (381)
T ss_pred HHHHHHHhc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH------HHHHHHHHH
Confidence 888877766 7888999999999999998888777777877765 689999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccchhhh
Q 021653 182 YFVMGAAILVAVTVLVYIQDNIGWGWGL 209 (309)
Q Consensus 182 ~~~~~iG~~l~~~~~~~i~~~~gw~~~f 209 (309)
..+.++|..+++.+.+.+.+...|...+
T Consensus 136 ~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 163 (381)
T PRK03633 136 MMVYYLGTVLGQLLVSKVSTELMSVLPW 163 (381)
T ss_pred HHHHHHHHHHHHHHHhcccccccchHHH
Confidence 9999999999999999887654444333
No 58
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.63 E-value=2.7e-14 Score=129.74 Aligned_cols=166 Identities=17% Similarity=0.319 Sum_probs=144.2
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Q 021653 27 IFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICL 106 (309)
Q Consensus 27 i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~ 106 (309)
+....++..+..+.....++.|. +++|.+..+.+.+.+...++..++.++.|+++||+ |||+.+.++.++..++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~~~ 81 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLA-EDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSLLL 81 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHHHH
Confidence 34556666776666666677666 56799999999999999999999999999999996 99999999999999998888
Q ss_pred HHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHH
Q 021653 107 TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 186 (309)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~ 186 (309)
.... +.+.+++++++.|++.+...+....+..|.+|++ +|++.+++.+...+
T Consensus 82 ~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 133 (352)
T cd06174 82 AFAS----------------------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPK------ERGRALGLFSAGFG 133 (352)
T ss_pred HHhc----------------------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCcc------chhhhhhHHHHHHH
Confidence 8765 7788999999999999999999999999999986 79999999999999
Q ss_pred HHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHH
Q 021653 187 AAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (309)
Q Consensus 187 iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~ 222 (309)
+|..+++.+.+.+.+..+|+..+++.++..++..+.
T Consensus 134 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (352)
T cd06174 134 LGALLGPLLGGLLAESLGWRWLFLILAILGLLLALL 169 (352)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999889999998877766555433
No 59
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.63 E-value=2.2e-14 Score=138.25 Aligned_cols=176 Identities=16% Similarity=0.129 Sum_probs=125.5
Q ss_pred ccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCH--HH--HHH--HHHHHHHHHHhHHHHHHHHHHhccchHHHHHH
Q 021653 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPL--TK--AAN--TLTNFGGTGSLTPLIGAFVADAYAGRFWTITI 94 (309)
Q Consensus 21 ~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~--~~--~~~--~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i 94 (309)
++......+..+++.+.+. +......++.++++.+. .. .+. +.++..++..+++++.|+++||+ |||+++.+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFG-VYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence 3444444455666665544 34445567777775332 21 111 24667788889999999999996 99999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhh
Q 021653 95 ASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKT 174 (309)
Q Consensus 95 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r 174 (309)
+.+++.++.++++++.+...+ .-....++++.|+++|+|.|+..+....+++|.+|++ +|
T Consensus 93 ~~~l~~i~~~~~a~~~~~~~~--------------g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~------~R 152 (490)
T PRK10642 93 TIVIMSISTFCIGLIPSYATI--------------GIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDR------KR 152 (490)
T ss_pred HHHHHHHHHHHHHhcccHHHH--------------HHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCC------CC
Confidence 999999999998876610000 0001124789999999999999999999999999987 68
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhh--------ccccchhhhhHHHHHHHH
Q 021653 175 WKYFNWYYFVMGAAILVAVTVLVYIQ--------DNIGWGWGLGIPTFAMFL 218 (309)
Q Consensus 175 ~~~~~~~~~~~~iG~~l~~~~~~~i~--------~~~gw~~~f~i~~~~~~~ 218 (309)
+...++...+..+|..+++.+...+. ..+|||+.|++.++..++
T Consensus 153 g~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~ 204 (490)
T PRK10642 153 GFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII 204 (490)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH
Confidence 99888888887888877765543332 367999999987654443
No 60
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.63 E-value=3.6e-15 Score=142.79 Aligned_cols=153 Identities=10% Similarity=0.025 Sum_probs=125.3
Q ss_pred HHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccc
Q 021653 46 ISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQV 125 (309)
Q Consensus 46 ~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 125 (309)
.+.+.+++|++..+.+++.+.+..++.++.+++|+++||+ |||+++.++.++..++..+.....
T Consensus 52 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~--------------- 115 (467)
T PRK09556 52 QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASL--------------- 115 (467)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHH---------------
Confidence 4567789999999999999999999999999999999996 999999988888777766665431
Q ss_pred cccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccc--
Q 021653 126 CQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNI-- 203 (309)
Q Consensus 126 ~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~-- 203 (309)
|. ...+.+.+++.|++.|++.|...+....+++|++|++ +|++..+++..+.++|..+++.+..++.+..
T Consensus 116 ~~--~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~------~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~ 187 (467)
T PRK09556 116 GS--GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRR------KRGRFLGFWNISHNLGGAGAGGVALWGANYFFD 187 (467)
T ss_pred hc--ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCcc------ceeeeEEeeecccchhhhHHHHHHHHHHHhhcc
Confidence 00 0127888999999999999999999999999999987 7999999999999999999988877665542
Q ss_pred -cchhhhhHHHHHHHHHHHH
Q 021653 204 -GWGWGLGIPTFAMFLSIIA 222 (309)
Q Consensus 204 -gw~~~f~i~~~~~~~~~~~ 222 (309)
+|+..|.+.+++.++..++
T Consensus 188 ~~~~~~f~~~g~~~~~~~i~ 207 (467)
T PRK09556 188 GHVIGMFIFPSIIALIIGFI 207 (467)
T ss_pred CcchhHHHHHHHHHHHHHHH
Confidence 5888887776665544333
No 61
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.63 E-value=4.8e-15 Score=136.35 Aligned_cols=150 Identities=14% Similarity=0.167 Sum_probs=131.9
Q ss_pred HHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcc
Q 021653 45 MISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQ 124 (309)
Q Consensus 45 l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 124 (309)
..+++.+++|++..+.+.+.+...++..++.++.|+++||+ |||+.+.++.++..++.+++..+.
T Consensus 17 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~-------------- 81 (379)
T TIGR00881 17 AMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFST-------------- 81 (379)
T ss_pred hhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHhh--------------
Confidence 34577889999999999999999999999999999999996 999999999999999998888776
Q ss_pred ccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHH-HHHHHhhccc
Q 021653 125 VCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAV-TVLVYIQDNI 203 (309)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~-~~~~~i~~~~ 203 (309)
+.+.++++|++.|++.+...+...++++|.+|++ +|++..++.+.+.++|..+++ .+...+.+..
T Consensus 82 --------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 147 (379)
T TIGR00881 82 --------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRS------ERGTWVSFWNCSHNVGGGLLPPLVLFGIAELY 147 (379)
T ss_pred --------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHh------hheeeEeehhccchhHHHHHHHHHHHHHHhcC
Confidence 7888999999999999999999999999999987 699999999999999999999 5666777788
Q ss_pred cchhhhhHHHHHHHHHHHHH
Q 021653 204 GWGWGLGIPTFAMFLSIIAF 223 (309)
Q Consensus 204 gw~~~f~i~~~~~~~~~~~~ 223 (309)
+|++.|++.+++.++..++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~ 167 (379)
T TIGR00881 148 SWHWVFIVPGIIAIIVSLIC 167 (379)
T ss_pred CchhHHHHHHHHHHHHHHHH
Confidence 99999988777665544333
No 62
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.63 E-value=6.8e-14 Score=131.95 Aligned_cols=173 Identities=12% Similarity=0.041 Sum_probs=136.2
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Q 021653 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (309)
Q Consensus 24 ~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~ 103 (309)
.+.+....++..+.. ++...+.+.+++++|++..+.+.+.+.+.++..+++++.|++.||+ |||+++.++.+++.+|.
T Consensus 5 ~~~~~~~f~~~G~~~-~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFAN-DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHH-HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 333444444444433 4444555677899999999999999999999999999999999996 99999999999999998
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHH
Q 021653 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (309)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~ 183 (309)
+++..+.. ..+.+.+++++++.|+|.|...+...+++.+..|++ ++++..+..+.
T Consensus 83 ~l~~~~~~-------------------~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 137 (410)
T TIGR00885 83 FLFWPAAE-------------------IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPES------TATRRLNLAQS 137 (410)
T ss_pred HHHHHHHh-------------------hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHh------HHHHHHHHHHH
Confidence 87655431 126788899999999999999999999999988876 57777888888
Q ss_pred HHHHHHHHHHHHHHHhhc--------------------------cccchhhhhHHHHHHHHHHHHH
Q 021653 184 VMGAAILVAVTVLVYIQD--------------------------NIGWGWGLGIPTFAMFLSIIAF 223 (309)
Q Consensus 184 ~~~iG~~l~~~~~~~i~~--------------------------~~gw~~~f~i~~~~~~~~~~~~ 223 (309)
..++|..+++.+.+.+.. ..+||++|++.+++.++..+++
T Consensus 138 ~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 138 FNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred HHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999888776532 2369999988777665544333
No 63
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.62 E-value=8.1e-14 Score=130.66 Aligned_cols=162 Identities=17% Similarity=0.116 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Q 021653 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (309)
Q Consensus 24 ~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~ 103 (309)
.+.++...++..++.......++. +.+++|.+..+.+++.+.+.+...++.+++|+++||+ |||++++++.++..++.
T Consensus 5 f~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~~~ 82 (393)
T PRK11195 5 FYAIMAAQFFSALADNALLFAAIA-LLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLLGC 82 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHHHH
Confidence 344555666666654444444444 3578999999999999999999999999999999996 99999999999998887
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHH
Q 021653 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (309)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~ 183 (309)
+.+.... +. ++.|+++|++.+...|...+++.|.+|++ +|++..++...
T Consensus 83 ~~~~~~~----------------------~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~------~~~~a~~~~~~ 131 (393)
T PRK11195 83 LLMLFGI----------------------HP---LLAYGLVGIGAAAYSPAKYGILTELLPGE------KLVKANGWMEG 131 (393)
T ss_pred HHHHHHH----------------------HH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHH------HHHHHHHHHHH
Confidence 7766544 32 67889999999999999999999999987 79999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHH
Q 021653 184 VMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLS 219 (309)
Q Consensus 184 ~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~ 219 (309)
..++|..+||.+++++.+. .|+..+.+.+.+.+++
T Consensus 132 ~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~ 166 (393)
T PRK11195 132 STIAAILLGTVLGGALADP-HAEAALAVCALIYLLA 166 (393)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 9999999999999998774 3776666665544443
No 64
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.62 E-value=2e-14 Score=137.42 Aligned_cols=145 Identities=10% Similarity=0.124 Sum_probs=126.9
Q ss_pred hcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccc
Q 021653 52 QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANK 131 (309)
Q Consensus 52 ~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (309)
+++++..+.+.+.+.+..+..++.+++|+++||+ |||+++.++.++..++.++...+. .
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~--------------------~ 128 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAA--------------------G 128 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHH--------------------H
Confidence 6889999999999999999999999999999996 999999999998888877765443 0
Q ss_pred hhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchhhhh
Q 021653 132 GQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN-IGWGWGLG 210 (309)
Q Consensus 132 ~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~-~gw~~~f~ 210 (309)
.+...+++.|++.|++.+...+....+++|.+|++ +|++..++++.+.++|..+++.+.+++.+. .||+..|+
T Consensus 129 ~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~ 202 (465)
T TIGR00894 129 GGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPK------ERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFY 202 (465)
T ss_pred cCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehh
Confidence 14567889999999999999999999999999987 799999999999999999999999999888 49999999
Q ss_pred HHHHHHHHHHHHH
Q 021653 211 IPTFAMFLSIIAF 223 (309)
Q Consensus 211 i~~~~~~~~~~~~ 223 (309)
+.++..++..++.
T Consensus 203 i~~~~~~~~~~~~ 215 (465)
T TIGR00894 203 VFGIVGCAWSLLW 215 (465)
T ss_pred hhhHHHHHHHHHH
Confidence 9887665554443
No 65
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.61 E-value=2.3e-14 Score=135.12 Aligned_cols=170 Identities=14% Similarity=0.171 Sum_probs=132.9
Q ss_pred HHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Q 021653 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTI 108 (309)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~ 108 (309)
...++..+........+|.+. ++++.+..+.+.+.+...++..+++++.|+++||+ |||+.+.++.++..++.+++..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~~~~~~ 101 (417)
T PRK10489 24 IARFISIFGLGLLGVAVPVQI-QMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGFIGLAL 101 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHHHHHHH
Confidence 334455555444444555554 56788999999999999999999999999999996 9999999988877777666553
Q ss_pred HhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHH
Q 021653 109 SAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAA 188 (309)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG 188 (309)
..... ..+.+.+++.+++.|++.+...+....++.|..|++ +|++..++.+...++|
T Consensus 102 ~~~~~-----------------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g 158 (417)
T PRK10489 102 NAFLP-----------------EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRE------NLMQAGAITMLTVRLG 158 (417)
T ss_pred HHHcC-----------------CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHH------HHHHHHHHHHHHHhHH
Confidence 22110 115677888899999998888888888899998876 6889999999999999
Q ss_pred HHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHH
Q 021653 189 ILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAF 223 (309)
Q Consensus 189 ~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~ 223 (309)
..+++.+++.+.+..+|++.|++.++..++..++.
T Consensus 159 ~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (417)
T PRK10489 159 SVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPL 193 (417)
T ss_pred HHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999888899999988777666554443
No 66
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.59 E-value=3e-14 Score=134.91 Aligned_cols=157 Identities=14% Similarity=0.170 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHH
Q 021653 60 AANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYV 139 (309)
Q Consensus 60 ~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (309)
.+.+++++.++..+|+.++|+++||+ |||.+++++.++.+++.+++.++... ....++.+
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~-------------------~~~e~li~ 121 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSA-------------------PSFEMLIL 121 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHh-------------------hhHHHHHH
Confidence 46678899999999999999999997 99999999999999998888877622 26788999
Q ss_pred HHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHH-HHhh-ccccchhhhhHHHHHHH
Q 021653 140 SLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVL-VYIQ-DNIGWGWGLGIPTFAMF 217 (309)
Q Consensus 140 ~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~-~~i~-~~~gw~~~f~i~~~~~~ 217 (309)
+|++.|+..|......+.|+.|..|.+ .||........+.++|.+++..++ ..+- +...|.+.+....+..+
T Consensus 122 GR~i~Gl~~gl~~~~~pmyl~E~sP~~------~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~ 195 (485)
T KOG0569|consen 122 GRLIVGLACGLSTGLVPMYLTEISPKN------LRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPAL 195 (485)
T ss_pred HHHHHHHHhHHHHHHHHHHHhhcChhh------hccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHH
Confidence 999999999999999999999999998 799999999999999999996553 3443 44569988888777655
Q ss_pred HHH--HHHHHhCcceecc-CCCCChhHH
Q 021653 218 LSI--IAFLIGYPLYRNL-DPAGSPFTR 242 (309)
Q Consensus 218 ~~~--~~~~~~~~~~~~~-~~~~~~~~~ 242 (309)
+.+ +.+.+++|+|.-- +.+.+++++
T Consensus 196 ~~l~~l~~~PESPk~Ll~~k~~~~~A~~ 223 (485)
T KOG0569|consen 196 LQLALLPFLPESPKYLLIKKGDEEEARK 223 (485)
T ss_pred HHHHHHhcCCCCcchHHHHcCCHHHHHH
Confidence 544 4566788988644 444444443
No 67
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.59 E-value=2.8e-13 Score=126.86 Aligned_cols=174 Identities=14% Similarity=0.100 Sum_probs=128.7
Q ss_pred ccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHH
Q 021653 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (309)
Q Consensus 21 ~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~ 100 (309)
++..+..+....+....++....++|.|+++++|++..+++.+.+...+...++.+++|+++||+ |||+.+..+.+...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~~ 293 (393)
T PRK15011 215 RRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAGV 293 (393)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHH
Confidence 33333333333333344445566789999999999999998888877777788899999999996 99998877765555
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHH
Q 021653 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (309)
Q Consensus 101 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 180 (309)
+....+.... +...+.+.+++.+++.|...+..+.+..|.+|+ ++++..++
T Consensus 294 ~~~~~~~~~~----------------------~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-------~~g~~~~~ 344 (393)
T PRK15011 294 CFYAGMLMAH----------------------SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-------QAGSATTL 344 (393)
T ss_pred HHHHHHHHHh----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-------CcchHHHH
Confidence 4433333222 445556667777777776666677778898885 47888888
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHH
Q 021653 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFL 224 (309)
Q Consensus 181 ~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~ 224 (309)
++...++|..+++.+.+.+.+..||+..|++..++.++++++.+
T Consensus 345 ~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK15011 345 YTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLL 388 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999988999999887777776665544
No 68
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.59 E-value=9.2e-14 Score=132.57 Aligned_cols=153 Identities=14% Similarity=0.105 Sum_probs=121.5
Q ss_pred HHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCc
Q 021653 44 NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGE 123 (309)
Q Consensus 44 ~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 123 (309)
...+|+.++ |++..+.+.+.+.+.++..++++++|+++||+ |||++++++.++..++.+++.+...
T Consensus 50 ~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~------------ 115 (452)
T PRK11273 50 LAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPW------------ 115 (452)
T ss_pred HhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhc------------
Confidence 344577777 99999999999999999999999999999996 9999999999988888877776430
Q ss_pred cccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHH-HHHHHHHHhhcc
Q 021653 124 QVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAIL-VAVTVLVYIQDN 202 (309)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~-l~~~~~~~i~~~ 202 (309)
...+...+++.+++.|++.|...+.......|++|++ +|++..++++.+.++|+. .++.....+...
T Consensus 116 ------~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 183 (452)
T PRK11273 116 ------ATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQK------ERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF 183 (452)
T ss_pred ------ccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChH------HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh
Confidence 0115667788899999999988888888889999876 799999999999998864 455543333334
Q ss_pred ccchhhhhHHHHHHHHHHHH
Q 021653 203 IGWGWGLGIPTFAMFLSIIA 222 (309)
Q Consensus 203 ~gw~~~f~i~~~~~~~~~~~ 222 (309)
.+||+.|++.+++.++..++
T Consensus 184 ~gw~~~f~i~~~~~~~~~~l 203 (452)
T PRK11273 184 NDWHAALYMPAFAAILVALF 203 (452)
T ss_pred ccHHHHHHHHHHHHHHHHHH
Confidence 59999999877765554333
No 69
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.59 E-value=1.6e-14 Score=143.00 Aligned_cols=196 Identities=14% Similarity=0.173 Sum_probs=148.0
Q ss_pred ccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHH
Q 021653 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (309)
Q Consensus 21 ~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~ 100 (309)
++.+.+.+....+......+........++++++++..+.+.+.+.+.++..++.++.|+++||+ ||++.+.++++++.
T Consensus 31 ~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ll~~ 109 (633)
T TIGR00805 31 IKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCAIMG 109 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHHHHH
Confidence 44444444444455555555666666778889999999999999999999999999999999996 99999999999999
Q ss_pred HHHHHHHHHhhcCCC----------------CCCCCCCc-----------ccccccc--chhHHHHHHHHHHHHHhhhcc
Q 021653 101 IGMICLTISAILPQL----------------RPPPCEGE-----------QVCQEAN--KGQVAILYVSLLLAALGSGGI 151 (309)
Q Consensus 101 ~g~~~~~~~~~~~~~----------------~~~~~~~~-----------~~~~~~~--~~~~~~~~~~~~l~gig~g~~ 151 (309)
+|.++.++..++..- ....|... ..|...+ +....+++++|+++|+|.+..
T Consensus 110 lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~ 189 (633)
T TIGR00805 110 LGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPI 189 (633)
T ss_pred HHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcc
Confidence 999998876532110 01123110 0222222 124567889999999999999
Q ss_pred hhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccc----------------------cchhhh
Q 021653 152 RPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNI----------------------GWGWGL 209 (309)
Q Consensus 152 ~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~----------------------gw~~~f 209 (309)
.+...+++.|.+|++ +|+...++++.+..+|..+|+++++++.+.+ +|+.+|
T Consensus 190 ~~~~~~~i~d~~~~~------~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~F 263 (633)
T TIGR00805 190 FPLGISYIDDFAKSK------NSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGF 263 (633)
T ss_pred hhcCchhhhccCCcc------ccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHH
Confidence 999999999999987 7999999999999999999999988876532 277778
Q ss_pred hHHHHHHHHHHHHH
Q 021653 210 GIPTFAMFLSIIAF 223 (309)
Q Consensus 210 ~i~~~~~~~~~~~~ 223 (309)
++.+++.++..+.+
T Consensus 264 li~g~l~~l~~v~l 277 (633)
T TIGR00805 264 LICGGVALLTSIPF 277 (633)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777665554443
No 70
>TIGR00898 2A0119 cation transport protein.
Probab=99.59 E-value=4.4e-14 Score=136.32 Aligned_cols=152 Identities=16% Similarity=0.236 Sum_probs=128.6
Q ss_pred HhHHhcCCC---HHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcc
Q 021653 48 YLTTQLHMP---LTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQ 124 (309)
Q Consensus 48 yl~~~~~~s---~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 124 (309)
.+.++++++ ..+.+...+++.++..+++++.|+++||+ |||++++++.++..++.++..++.
T Consensus 114 ~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~~-------------- 178 (505)
T TIGR00898 114 TIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFSP-------------- 178 (505)
T ss_pred cEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHcc--------------
Confidence 456788998 88999999999999999999999999996 999999999999999888887766
Q ss_pred ccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 021653 125 VCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIG 204 (309)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~g 204 (309)
+.+.+++.|++.|++.++..+....++.|.+|++ +|+...+.+..+..+|.++++.+...+.+
T Consensus 179 --------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~~~~--- 241 (505)
T TIGR00898 179 --------NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKK------QRAIVGTLIQVFFSLGLVLLPLVAYFIPD--- 241 (505)
T ss_pred --------cHHHHHHHHHHHHhhccchHHHHHHHhheecChh------hhHHHHHHHHHHHHHHHHHHHHHHHHhhH---
Confidence 7888999999999999999999999999999987 68888888888899999998888766654
Q ss_pred chhhhhHHHHHHHHHHHHHH--HhCccee
Q 021653 205 WGWGLGIPTFAMFLSIIAFL--IGYPLYR 231 (309)
Q Consensus 205 w~~~f~i~~~~~~~~~~~~~--~~~~~~~ 231 (309)
||+.|++.++..++..+..+ +++|++.
T Consensus 242 wr~~~~~~~i~~~~~~~~~~~~~esp~~l 270 (505)
T TIGR00898 242 WRWLQLAVSLPTFLFFLLSWFVPESPRWL 270 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChHHH
Confidence 99999887776655544332 3444444
No 71
>PRK15075 citrate-proton symporter; Provisional
Probab=99.59 E-value=1.3e-13 Score=130.90 Aligned_cols=173 Identities=14% Similarity=0.101 Sum_probs=121.7
Q ss_pred CccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHH-HHHHHH-----HHHhHHHHHHHHHHhccchHHHHH
Q 021653 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANT-LTNFGG-----TGSLTPLIGAFVADAYAGRFWTIT 93 (309)
Q Consensus 20 ~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~-~~~~~~-----~~~~~~l~~G~laD~~~GR~~~i~ 93 (309)
+|++..-+.+..+++.+....+. .+.+.+.++++.+..+.+.. .+.... ...+++++.|+++||+ |||+.++
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~ 90 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFG-FYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKGLI 90 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHHHH
Confidence 35554445555555555554444 44457778898877664433 222222 2236788999999996 9999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhh
Q 021653 94 IASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATK 173 (309)
Q Consensus 94 i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~ 173 (309)
.+.+++.++.+++.++.....+ .......++++|++.|++.|...+....+.+|.+|++ +
T Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~--------------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~------~ 150 (434)
T PRK15075 91 VTLSIMASGTLLIAFVPGYATI--------------GLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPG------R 150 (434)
T ss_pred HHHHHHHHHHHHHHhCCcHHHH--------------HHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcc------c
Confidence 9999999999888876510000 0000125688999999999999998999999999987 7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHh--------hccccchhhhhHHHH
Q 021653 174 TWKYFNWYYFVMGAAILVAVTVLVYI--------QDNIGWGWGLGIPTF 214 (309)
Q Consensus 174 r~~~~~~~~~~~~iG~~l~~~~~~~i--------~~~~gw~~~f~i~~~ 214 (309)
|++..+++....++|..+++.+++.+ .+..|||+.|++..+
T Consensus 151 rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 151 KGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 99999988888777777776665554 356799999987544
No 72
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.58 E-value=1.2e-13 Score=131.87 Aligned_cols=148 Identities=12% Similarity=0.070 Sum_probs=124.6
Q ss_pred HHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccc
Q 021653 47 SYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVC 126 (309)
Q Consensus 47 ~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 126 (309)
..+.+++|++..+.+.+.+.+..+..++.+++|+++||+ |||++++.+.++..++.+++..+.
T Consensus 43 ~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~---------------- 105 (455)
T TIGR00892 43 KELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFSS---------------- 105 (455)
T ss_pred HHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHhh----------------
Confidence 445679999999999999999999999999999999996 999999999999988888877765
Q ss_pred ccccchhHHHHHH-HHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 021653 127 QEANKGQVAILYV-SLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGW 205 (309)
Q Consensus 127 ~~~~~~~~~~~~~-~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~gw 205 (309)
+.+.+++ .|++.|++.|...+....++.+.++ + +|++..++++.+.++|..+++.+.+++.+..||
T Consensus 106 ------~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~------~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gw 172 (455)
T TIGR00892 106 ------NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-R------RRPLANGLAMAGSPVFLSTLAPLNQYLFESFGW 172 (455)
T ss_pred ------hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-h------hHHHHHHHHHhcccHHHHHHHHHHHHHHHHhCh
Confidence 5566654 4688899998766666677788885 3 699999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHH
Q 021653 206 GWGLGIPTFAMFLSIIAFL 224 (309)
Q Consensus 206 ~~~f~i~~~~~~~~~~~~~ 224 (309)
|++|++.+++.++..+..+
T Consensus 173 r~~f~~~~~~~~~~~v~~~ 191 (455)
T TIGR00892 173 RGSFLILGGLLLHCCVCGA 191 (455)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999998887765554433
No 73
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.58 E-value=2.8e-13 Score=128.47 Aligned_cols=179 Identities=13% Similarity=-0.003 Sum_probs=128.6
Q ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHhHH-hcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHH
Q 021653 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTT-QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (309)
Q Consensus 22 ~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~-~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~ 100 (309)
|++++..+..++.....+. .+.+...+.+ ++|++..+.+++.++..++..++.++.|++.||+ |.|+++.++.++..
T Consensus 34 r~l~~s~~~f~~~F~~w~~-~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~ 111 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWML-FSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 5555544444444444443 4444555544 8999999999999999999999999999999997 99999999999998
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHH
Q 021653 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (309)
Q Consensus 101 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 180 (309)
+.++++.++... ...++..+++.|++.|++ |...+.....++++||++ +||+..++
T Consensus 112 i~~~~~~~a~~~-----------------~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~------~rG~A~Gi 167 (462)
T PRK15034 112 IPCVWLGIAVQN-----------------PNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKA------KQGSALGI 167 (462)
T ss_pred HHHHHHHHHHcc-----------------cCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHh------HhHHHHHH
Confidence 888888765200 011788999999999998 667888899999999987 79999999
Q ss_pred HHHHHHHHHHHHHHHHHHhh-----c-------------cccchhhhhHHHHHHHHHHHHHHHh
Q 021653 181 YYFVMGAAILVAVTVLVYIQ-----D-------------NIGWGWGLGIPTFAMFLSIIAFLIG 226 (309)
Q Consensus 181 ~~~~~~iG~~l~~~~~~~i~-----~-------------~~gw~~~f~i~~~~~~~~~~~~~~~ 226 (309)
+....++|..+++.+...+. . ..+|+...++..++.++..++.++.
T Consensus 168 ~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 168 NGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 87667777766554433221 2 2346666656555555554444443
No 74
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.58 E-value=2.9e-13 Score=127.19 Aligned_cols=171 Identities=7% Similarity=0.016 Sum_probs=139.4
Q ss_pred CCccHHHHHH-HHHHHHHHHHHhhHHHHHHHhHHhcCCCHHH-HHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHH
Q 021653 19 GGMITMPFIF-SNEVCEKLAVVGFNTNMISYLTTQLHMPLTK-AANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIAS 96 (309)
Q Consensus 19 ~~~~~~~~i~-~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~-~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~ 96 (309)
+.|+...+++ +-.++..+=. ..+....|+.+++|++..+ .+.+.+.+..++.++.+++|+++||+ |.|+++.++.
T Consensus 23 ~~W~~~~~~lC~fGF~~e~R~--n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~ 99 (511)
T TIGR00806 23 KSWRVLVLYLCFYGFMAQFRP--GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQA 99 (511)
T ss_pred cchhHHHHHHHHHHHHHHhhc--hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHH
Confidence 4576555433 3333333321 2344567899999999999 99999999999999999999999996 9999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhH
Q 021653 97 IIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWK 176 (309)
Q Consensus 97 ~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~ 176 (309)
+...+..+++.++. +...+.+.|++.|++.|+.. ....+++.++|++ +|++
T Consensus 100 l~Wsl~t~L~~fa~----------------------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~k------ER~r 150 (511)
T TIGR00806 100 LSFVCVWLLLLLGT----------------------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPS------RYQR 150 (511)
T ss_pred HHHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHH------HHHH
Confidence 99999999999887 78889999999999999999 9999999999987 7999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccchhhhh---HHHHHHHHHHHH
Q 021653 177 YFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLG---IPTFAMFLSIIA 222 (309)
Q Consensus 177 ~~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~---i~~~~~~~~~~~ 222 (309)
..+++..+..+|.++++.+++++ ..+||+.-+. +......+++++
T Consensus 151 atsi~~sg~~vG~~Ia~~L~qll-~s~gWr~y~~Ln~Isl~s~~~a~~~ 198 (511)
T TIGR00806 151 AAAYSRAAVLLGVFLSSVLGQLL-VTLGWISYSTLNIISLVFMTFSVFL 198 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HhcCchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999884 4679986543 334444444433
No 75
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.57 E-value=6.1e-13 Score=124.56 Aligned_cols=174 Identities=10% Similarity=0.091 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHH-HHHhHHHHHHHHHHhccchHHHHH-HHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGG-TGSLTPLIGAFVADAYAGRFWTIT-IASIIYQ 100 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~-~~~~~~l~~G~laD~~~GR~~~i~-i~~~l~~ 100 (309)
..+..++..++.++....+...++.|+.+++|.+.++.+.+.+.... +..++++++|+ +||+ ||||.++ .+.++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~~~ 93 (393)
T PRK15011 16 TSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLLGV 93 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHHHH
Confidence 34555566778888877788889999999999999999998776545 55556666666 9997 9998755 4445444
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHH-HHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHH
Q 021653 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSL-LLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (309)
Q Consensus 101 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~ 179 (309)
++..+..++. +.+.+++.+ ++.+.+ +...+....+..|..+++. +..+.+.+
T Consensus 94 ~~~~~~~~~~----------------------~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 146 (393)
T PRK15011 94 LACTLFAWNR----------------------NYFVLLFVGVFLSSFG-STANPQMFALAREHADKTG----REAVMFSS 146 (393)
T ss_pred HHHHHHHHhh----------------------HHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhhcc----chHHHHHH
Confidence 5555555544 555555444 444443 4556666777777655431 01244456
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHH
Q 021653 180 WYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (309)
Q Consensus 180 ~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~ 225 (309)
+.+.+.++|..++|.+++++.+..|||..|++.++..++..++.+.
T Consensus 147 ~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 147 FLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 7888899999999999999998899999999888766655544443
No 76
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.56 E-value=2.8e-13 Score=129.79 Aligned_cols=175 Identities=13% Similarity=0.002 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g 102 (309)
..+.+.+..++....+++...++|.|+++++|++..+++.......++..++.+++|+++||+ |||+.+.+...+..++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~~ 337 (467)
T PRK09556 259 VIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALII 337 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHHH
Confidence 456666666677777778888999999999999999999999989999999999999999996 9998776655444433
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHH
Q 021653 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (309)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~ 182 (309)
..+..... ..+....++.+++.|++..+..........|.+|++ .+++..+..+
T Consensus 338 ~~~~~~~~--------------------~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~------~~g~a~gi~~ 391 (467)
T PRK09556 338 FTLGVYQH--------------------ATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKK------AIGVANGIKG 391 (467)
T ss_pred HHHHHHHh--------------------cCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchh------hHHHHHHHHH
Confidence 32222211 013444556666666544343333345667999987 7999999999
Q ss_pred HHHHH-HHHHHHHHHHHhhc------------cccchhhhhHHHHHHHHHHHHHH
Q 021653 183 FVMGA-AILVAVTVLVYIQD------------NIGWGWGLGIPTFAMFLSIIAFL 224 (309)
Q Consensus 183 ~~~~i-G~~l~~~~~~~i~~------------~~gw~~~f~i~~~~~~~~~~~~~ 224 (309)
...++ |+.++|.+.|++.+ ..+|+..|++..++.+++.+..+
T Consensus 392 ~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 392 TFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred HHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 88886 77899999999988 56899999888777777655544
No 77
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.56 E-value=1.2e-13 Score=126.57 Aligned_cols=179 Identities=17% Similarity=0.171 Sum_probs=143.4
Q ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhcc-chHHHHH-HHHHHH
Q 021653 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYA-GRFWTIT-IASIIY 99 (309)
Q Consensus 22 ~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~-GR~~~i~-i~~~l~ 99 (309)
|.+|++.+..++..+.-|++..+.|.|+.+..|+|..+++...+.+..+...+++++||+|||++ |||...- ++++..
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 67888999999999999999999999999999999999999999999999999999999999998 7775443 333333
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHH
Q 021653 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (309)
Q Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~ 179 (309)
.++.+....+. +.+..+..+..+++|+-.-+..-.+-....|..|++ .-|+..+
T Consensus 332 ~~~~~~~w~~~--------------------~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~------AaGtA~G 385 (448)
T COG2271 332 TASLVLYWLAP--------------------NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKK------AAGTATG 385 (448)
T ss_pred HHHHHHHHcCC--------------------CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHh------hccchhc
Confidence 34444333332 225677777778888877777777777778988877 6788888
Q ss_pred HHHHHHHH-HHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHh
Q 021653 180 WYYFVMGA-AILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIG 226 (309)
Q Consensus 180 ~~~~~~~i-G~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~ 226 (309)
...+...+ |+.++....+++.|.+||...|.+..+..+++.+++.+.
T Consensus 386 f~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~ 433 (448)
T COG2271 386 FVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPV 433 (448)
T ss_pred hhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHH
Confidence 87777777 888898999999998999999988777777666555443
No 78
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.56 E-value=1.1e-13 Score=131.49 Aligned_cols=154 Identities=12% Similarity=0.091 Sum_probs=124.9
Q ss_pred HHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcc
Q 021653 45 MISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQ 124 (309)
Q Consensus 45 l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 124 (309)
..+++++ +|++..+.+++.+.+.++..++.++.|+++||+ |||+.+.++.++..++.++.......
T Consensus 49 ~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~------------ 114 (438)
T TIGR00712 49 AMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPWA------------ 114 (438)
T ss_pred hhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhccccc------------
Confidence 3456665 599999999999999999999999999999996 99999999988888887766543200
Q ss_pred ccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH-hhccc
Q 021653 125 VCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVY-IQDNI 203 (309)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~-i~~~~ 203 (309)
..+...+++.|++.|++.|...+.....+.|.+|++ +|++..++++.+.++|+.+++.+.+. +....
T Consensus 115 ------~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~------~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 182 (438)
T TIGR00712 115 ------TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQS------ERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFN 182 (438)
T ss_pred ------cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcc------cchhHHHHHHHHHHhHhHHHHHHHHHHHHHhh
Confidence 014566778899999999998888889999999987 79999999999999999998877665 44457
Q ss_pred cchhhhhHHHHHHHHHHHHHH
Q 021653 204 GWGWGLGIPTFAMFLSIIAFL 224 (309)
Q Consensus 204 gw~~~f~i~~~~~~~~~~~~~ 224 (309)
+||..|++.+++.++..++.+
T Consensus 183 ~w~~~f~~~~~~~~i~~~~~~ 203 (438)
T TIGR00712 183 DWHAALYFPAICAIIVALFAF 203 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHH
Confidence 999999998777666544433
No 79
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.55 E-value=5.7e-13 Score=124.74 Aligned_cols=178 Identities=7% Similarity=-0.095 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g 102 (309)
..|.+....++...+...+...++.|+++++|++..+.+.+.+...++..+++++.|+++||+ |||+.++.+.....++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~ 81 (396)
T TIGR00882 3 NFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLVL 81 (396)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 355566667777777777788999999999999999999999999999999999999999996 9999998877666554
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHH
Q 021653 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (309)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~ 182 (309)
..........+.. .......+.+++++.+++.+...+....+..|..+ +++..++...
T Consensus 82 ~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~~g~~~ 139 (396)
T TIGR00882 82 FAPFFIYVFGPLL--------------QSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--------NSNFEYGKAR 139 (396)
T ss_pred HHHHHHHHhhhHH--------------HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--------hcccccchhh
Confidence 4332211100000 00023345666788888888888887777666422 2334556666
Q ss_pred HHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHH
Q 021653 183 FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFL 224 (309)
Q Consensus 183 ~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~ 224 (309)
...++|..+++.+++.+.+ .+|+..|++.+++.++..++.+
T Consensus 140 ~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~ 180 (396)
T TIGR00882 140 MFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLM 180 (396)
T ss_pred hhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHH
Confidence 7788999999999888765 5999999888776665544433
No 80
>PRK03699 putative transporter; Provisional
Probab=99.55 E-value=6.7e-13 Score=124.27 Aligned_cols=170 Identities=16% Similarity=0.128 Sum_probs=130.6
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g 102 (309)
..+.+.+..++.....+++..++|.|+++.+|++..+++.+.+.+.++..++.+++|+++||+ |||+.+.....+..++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~~ 284 (394)
T PRK03699 206 GVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALVL 284 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHHH
Confidence 344444555555666677888999999999999999999999999999999999999999996 9999888777665555
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHH
Q 021653 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (309)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~ 182 (309)
..+..... +...+.+..++.|++.++..+....+..|..|.+ ++...++.+
T Consensus 285 ~~~~~~~~----------------------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~ 335 (394)
T PRK03699 285 MYLFVNTD----------------------DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-------SPKLVNFIL 335 (394)
T ss_pred HHHHHHcC----------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-------CHHHHHHHH
Confidence 44443322 3334455566778888877788777888877654 344567777
Q ss_pred HHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHH
Q 021653 183 FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (309)
Q Consensus 183 ~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~ 222 (309)
...++|..++|.+.+++.+..|++..+++.+++.+++.++
T Consensus 336 ~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 375 (394)
T PRK03699 336 TCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVM 375 (394)
T ss_pred HhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHH
Confidence 7889999999999999999999999988877776665443
No 81
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.54 E-value=1.3e-13 Score=133.82 Aligned_cols=156 Identities=15% Similarity=0.048 Sum_probs=133.9
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccc
Q 021653 51 TQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEAN 130 (309)
Q Consensus 51 ~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (309)
+.++.+........+++.++..+|+++.|.++|+ +|||++++++.++.+++.++.+++.
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~-~GRk~~~~~~~~~~~i~~~~~a~a~-------------------- 169 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDR-FGRKPVLLVSLLLFIIFGILTAFAP-------------------- 169 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhh-cccHHHHHHHHHHHHHHHHHHHHhC--------------------
Confidence 5667788888999999999999999999999999 5999999999999999999999888
Q ss_pred chhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhh
Q 021653 131 KGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLG 210 (309)
Q Consensus 131 ~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~ 210 (309)
+...+.+.|++.|++.++...+...+.+|.++++ .|+...++ ......|+.+++.+++++.. +||+.++
T Consensus 170 --~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~------~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~ 238 (521)
T KOG0255|consen 170 --NYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPK------QRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFW 238 (521)
T ss_pred --cHHHHHHHHHHHHhhccchhHHhHhhheeecCcc------hhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHH
Confidence 8999999999999999999999999999999998 68888888 77777788888888888877 8999999
Q ss_pred HHHHHHHHHHHH-HHH-hCcceeccCCCCC
Q 021653 211 IPTFAMFLSIIA-FLI-GYPLYRNLDPAGS 238 (309)
Q Consensus 211 i~~~~~~~~~~~-~~~-~~~~~~~~~~~~~ 238 (309)
+..+..++.++. ++. ++|||+..+.+.+
T Consensus 239 ~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~ 268 (521)
T KOG0255|consen 239 IISIPSGLFLLLWFLPPESPRWLLSKGRID 268 (521)
T ss_pred HHHHHHHHHHHHHHccCcChHHHHHcCchH
Confidence 877776655444 333 6777776555443
No 82
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.54 E-value=2e-13 Score=125.73 Aligned_cols=147 Identities=12% Similarity=0.174 Sum_probs=121.8
Q ss_pred HHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 021653 43 TNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEG 122 (309)
Q Consensus 43 ~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 122 (309)
..+.+.+.+++|++..+.+.+.+.+.++..++.++.|+++||+ |||+++.++.++..++.+.. ...
T Consensus 20 ~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~~------------ 85 (355)
T TIGR00896 20 GPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SAP------------ 85 (355)
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hhc------------
Confidence 3344567789999999999999999999999999999999996 99999999998887777665 333
Q ss_pred ccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 021653 123 EQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN 202 (309)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~ 202 (309)
+...+++.|++.|+|.+...+..+....|.+++ +|++..+.++.+.++|..+++.+.+.+.+.
T Consensus 86 ----------~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~ 148 (355)
T TIGR00896 86 ----------GTALLFAGTALIGVGIAIINVLLPSLIKRDFPQ-------RVGLMTGLYSMALMGGAALAAAATVPLAQH 148 (355)
T ss_pred ----------cHHHHHHHHHHHHHHHHHHhccchHHHHHhCcc-------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567788999999999999888888888888863 589999999999999999999988888765
Q ss_pred c--cchhhhhHHHHHHHHHH
Q 021653 203 I--GWGWGLGIPTFAMFLSI 220 (309)
Q Consensus 203 ~--gw~~~f~i~~~~~~~~~ 220 (309)
. +||..|.+.+++.++..
T Consensus 149 ~~~~w~~~f~~~~~~~~~~~ 168 (355)
T TIGR00896 149 SGGHWQQALAWWALPALLAL 168 (355)
T ss_pred hhhhHHHHHHHHHHHHHHHH
Confidence 4 38988877665544443
No 83
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.54 E-value=8.5e-13 Score=123.47 Aligned_cols=167 Identities=12% Similarity=0.098 Sum_probs=128.9
Q ss_pred HHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhc
Q 021653 33 CEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAIL 112 (309)
Q Consensus 33 ~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~ 112 (309)
+..+.+.....+++.|+.+ .|++ +.+...+.+.++..++.++.|+++||+ |||+.+.++.++..++.+++....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~-- 300 (399)
T PRK05122 227 LASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLAP-- 300 (399)
T ss_pred HHHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhc--
Confidence 3444555566777888753 4553 344556667777888899999999996 999999888888777776666544
Q ss_pred CCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHH
Q 021653 113 PQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVA 192 (309)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~ 192 (309)
+...+++..++.|+|.+...+.......|.+|++ +|++..++++...++|..++
T Consensus 301 --------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~~~~~~~g~~~~ 354 (399)
T PRK05122 301 --------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQ------NRGAALGAYSVFLDLSLGIT 354 (399)
T ss_pred --------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHHHHHHHHHH
Confidence 4556677788899999988887777788888766 79999999999999999999
Q ss_pred HHHHHHhhccccchhhhhHHHHHHHHHHHHHHHhCccee
Q 021653 193 VTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYR 231 (309)
Q Consensus 193 ~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~ 231 (309)
+.+.+++.+..||+..|++.+++.+++++..+...++.+
T Consensus 355 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (399)
T PRK05122 355 GPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAP 393 (399)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 999999999899999999888877777665554444333
No 84
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.53 E-value=1.6e-12 Score=118.08 Aligned_cols=168 Identities=20% Similarity=0.254 Sum_probs=145.0
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHH-HHHHHHHHHHHHHHH
Q 021653 27 IFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFW-TITIASIIYQIGMIC 105 (309)
Q Consensus 27 i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~-~i~i~~~l~~~g~~~ 105 (309)
.....++..........+++.|+.+.+|.+..+.+........+..++.++.|+++||+ |||+ .+.++..+..++.++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~ 258 (352)
T cd06174 180 LALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAALGLLL 258 (352)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHH
Confidence 33444555566666677788888877899999999999999999999999999999996 9999 999999988888887
Q ss_pred HHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHH
Q 021653 106 LTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM 185 (309)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~ 185 (309)
..... +...+++..++.|++.+...+....+..|..|++ +|++..+.++...
T Consensus 259 ~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 310 (352)
T cd06174 259 LALAP----------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPE------ARGTASGLFNTFG 310 (352)
T ss_pred HHHhc----------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHH------HHHHHHHHHHHHH
Confidence 77655 5667788889999999999999999999999976 7999999999999
Q ss_pred HHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHH
Q 021653 186 GAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAF 223 (309)
Q Consensus 186 ~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~ 223 (309)
++|..+++.+.+++.+..+|+..+.+.+++.+++.+..
T Consensus 311 ~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 311 SLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 99999999999999998999999999888877766544
No 85
>PRK09952 shikimate transporter; Provisional
Probab=99.52 E-value=2.3e-12 Score=122.51 Aligned_cols=179 Identities=15% Similarity=0.114 Sum_probs=126.5
Q ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHH
Q 021653 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (309)
Q Consensus 22 ~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~ 101 (309)
+....++...++..+.+|....+++.|+++.+|++......+.........++.++.|+++||+ |||+++..+.++..+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~~~~ 328 (438)
T PRK09952 250 GAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALIGTL 328 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHH
Confidence 3333334456666777888888999999999999987665555556666778888999999996 999998888766555
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHH
Q 021653 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (309)
Q Consensus 102 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~ 181 (309)
+.+.+..... .......+.+..++.+++.+...+...++.+|.+|.+ .|++..++.
T Consensus 329 ~~~~~~~~~~------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~------~r~tg~g~~ 384 (438)
T PRK09952 329 SAFPFFMALE------------------AQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGAS------YRYSGAGVG 384 (438)
T ss_pred HHHHHHHHHH------------------cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcc------hhHHHHhHH
Confidence 4433332210 0012333444556667888888888899999999987 688777774
Q ss_pred -HHHHHHHHHHHHHHHHHhhccc--cchhhhhHHHHHHHHHHHHHHH
Q 021653 182 -YFVMGAAILVAVTVLVYIQDNI--GWGWGLGIPTFAMFLSIIAFLI 225 (309)
Q Consensus 182 -~~~~~iG~~l~~~~~~~i~~~~--gw~~~f~i~~~~~~~~~~~~~~ 225 (309)
..+..+|+.++|.+.+++.+.. +|..++.+.+++.+++.+..+.
T Consensus 385 ~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 431 (438)
T PRK09952 385 YQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALL 431 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 4455689999999999987744 4777777776666666555443
No 86
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.51 E-value=6.4e-13 Score=126.58 Aligned_cols=148 Identities=15% Similarity=0.170 Sum_probs=133.9
Q ss_pred hcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccc
Q 021653 52 QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANK 131 (309)
Q Consensus 52 ~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (309)
++.++..+.+.+.+.+..++.++.+.+|+++||+ |-|+++..+.++..+++++...+..
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~-------------------- 125 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAAS-------------------- 125 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 5789999999999999999999999999999997 9999999999999999999998872
Q ss_pred hhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchhhhh
Q 021653 132 GQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN-IGWGWGLG 210 (309)
Q Consensus 132 ~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~-~gw~~~f~ 210 (309)
...+.+.+.|+++|++.|...+++..+.+.+.|.+ +|+++.+..+.+..+|.+++..+.|++.+. .||+..|+
T Consensus 126 ~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~------Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY 199 (466)
T KOG2532|consen 126 IGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPN------ERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFY 199 (466)
T ss_pred hcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHH------HHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHH
Confidence 13446789999999999999999999999999988 799999999999999999999999999888 99999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 021653 211 IPTFAMFLSIIAFLIG 226 (309)
Q Consensus 211 i~~~~~~~~~~~~~~~ 226 (309)
+.+++.++..++++..
T Consensus 200 ~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 200 VFGIVGLIWFILWFLF 215 (466)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999887766665544
No 87
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.51 E-value=2.6e-12 Score=118.60 Aligned_cols=156 Identities=12% Similarity=0.077 Sum_probs=123.9
Q ss_pred HHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021653 38 VVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRP 117 (309)
Q Consensus 38 ~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~ 117 (309)
......+++.|+++++|.++.+.+.+.....+...++.+++|+++||+ |||+.+.++.++..++.+......
T Consensus 215 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~------- 286 (375)
T TIGR00899 215 NILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFYTGLAADN------- 286 (375)
T ss_pred HHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHHHHHHHHH-------
Confidence 344456688899889999999998887777777777889999999996 999998887766555544444333
Q ss_pred CCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 021653 118 PPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLV 197 (309)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~ 197 (309)
+.+.+++...+.|++.|...+....+..|..|++ +++..+.++...++|..+++.+.+
T Consensus 287 ---------------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~g~~~~g 344 (375)
T TIGR00899 287 ---------------SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-------AGAATTLYTNTGRVGWIIAGSVGG 344 (375)
T ss_pred ---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-------hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666777888888888888888888988753 568889999999999999999999
Q ss_pred HhhccccchhhhhHHHHHHHHHHHHH
Q 021653 198 YIQDNIGWGWGLGIPTFAMFLSIIAF 223 (309)
Q Consensus 198 ~i~~~~gw~~~f~i~~~~~~~~~~~~ 223 (309)
++.+..||+..|++.+++.+++.++.
T Consensus 345 ~~~~~~g~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 345 ILAERWSYHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred HHHHhccchhHHHHHHHHHHHHHHHH
Confidence 99998999999998888777666554
No 88
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.51 E-value=1.2e-12 Score=123.60 Aligned_cols=181 Identities=5% Similarity=-0.118 Sum_probs=117.8
Q ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHH
Q 021653 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (309)
Q Consensus 22 ~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~ 101 (309)
+..+.+....++..+++..+...++.|+++++|++..+.+.+.+.+.++..+++++.|+++||+ |||++++++..+..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLLV 88 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHH
Confidence 3456666666777777777889999999999999999999999999999999999999999996 999999887666554
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHH
Q 021653 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (309)
Q Consensus 102 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~ 181 (309)
+..........+. .......+.++.++..|...........+..+.. .++++..++..
T Consensus 89 ~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~g~~ 146 (420)
T PRK09528 89 LFGPFFIYVFAPL------------------LQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERV----SRRSGFEYGRA 146 (420)
T ss_pred HHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHH----Hhhccccchhh
Confidence 4432221110000 0000111222223322322222222222222211 11456666777
Q ss_pred HHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHh
Q 021653 182 YFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIG 226 (309)
Q Consensus 182 ~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~ 226 (309)
....++|..+++.+.+++.+ .+|+..|++.+++.++..++.+..
T Consensus 147 ~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~ 190 (420)
T PRK09528 147 RMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFA 190 (420)
T ss_pred HHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcc
Confidence 77789999999999998876 489999988777766655554443
No 89
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.50 E-value=2.7e-12 Score=135.38 Aligned_cols=154 Identities=11% Similarity=0.045 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCH--HHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPL--TKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~--~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~ 100 (309)
....+++..++.++...+....+..++...++.+. ...+++.+++.+...++++++|+++||+ |||++++++.++.+
T Consensus 10 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~~~ 88 (1146)
T PRK08633 10 GFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLFEV 88 (1146)
T ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHHHH
Confidence 34444455555555554445555666666666654 3467888899999999999999999996 99999999988777
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHH
Q 021653 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (309)
Q Consensus 101 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 180 (309)
++.++..+... ..+.+.++++|++.|++.+...+...++++|.+|++ +|+..+++
T Consensus 89 ~~~~~~~~~~~-------------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~ 143 (1146)
T PRK08633 89 GLTLLIVLAYY-------------------LGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKE------NLSRANGL 143 (1146)
T ss_pred HHHHHHHHHHH-------------------HccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcc------cchhhhhH
Confidence 66665554431 115788999999999999999999999999999987 79999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcc
Q 021653 181 YYFVMGAAILVAVTVLVYIQDN 202 (309)
Q Consensus 181 ~~~~~~iG~~l~~~~~~~i~~~ 202 (309)
+..+.++|.++++.+++++.+.
T Consensus 144 ~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 144 LEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999988765
No 90
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.50 E-value=1.6e-12 Score=119.36 Aligned_cols=168 Identities=12% Similarity=0.067 Sum_probs=130.5
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Q 021653 25 PFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMI 104 (309)
Q Consensus 25 ~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~ 104 (309)
+.+....++..+........++.|. +++|.+..+.+.+.+...++..++.++.|+++||+ |||+.+.++.++..++.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~ 285 (377)
T TIGR00890 208 WVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAVGMA 285 (377)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHHHH
Confidence 3333334444444444455566665 56899998889999999999999999999999996 999999998888888776
Q ss_pred HHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHH
Q 021653 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 184 (309)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~ 184 (309)
++.... ......++...++.+++.|...+..+.+.+|.+|++ +|++..++++..
T Consensus 286 ~~~~~~--------------------~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~ 339 (377)
T TIGR00890 286 AMLFIP--------------------MLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPA------NSAANYGFLYTA 339 (377)
T ss_pred HHHHcc--------------------cchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhh------hhhhHhHHHHHH
Confidence 665433 012233445567778888888888888999999987 799999999999
Q ss_pred HHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHH
Q 021653 185 MGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSI 220 (309)
Q Consensus 185 ~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~ 220 (309)
.++|..+++.+.+++.+..||+..|.+.+++.++++
T Consensus 340 ~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 340 KAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 999999999999999999999999988877666543
No 91
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.50 E-value=9.5e-13 Score=121.68 Aligned_cols=168 Identities=14% Similarity=0.030 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g 102 (309)
..+......++.....+....+++.|+++++|++..+.+.+.....++..++.+++|+++||+ |||+.+.++..+..+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~ 298 (394)
T TIGR00883 220 PFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLAALL 298 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHH
Confidence 355556666777777778888899999889999999999988889999999999999999996 9999887665544433
Q ss_pred H-HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHH-
Q 021653 103 M-ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW- 180 (309)
Q Consensus 103 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~- 180 (309)
. .+..... ...+...++...++.+++.+...++...+.+|.+|++ .|++..+.
T Consensus 299 ~~~~~~~~~-------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~~~~~~~~ 353 (394)
T TIGR00883 299 AVPLLMALL-------------------DSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTE------VRYTGASLA 353 (394)
T ss_pred HHHHHHHHh-------------------cCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCcc------ceeeEeeeh
Confidence 2 2222111 0114455666677888888888899999999999987 57777776
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccc-chhhhhHHHHHH
Q 021653 181 YYFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAM 216 (309)
Q Consensus 181 ~~~~~~iG~~l~~~~~~~i~~~~g-w~~~f~i~~~~~ 216 (309)
+..+..+|+.++|.+.+++.+..| |+..++..++..
T Consensus 354 ~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 354 YNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred hHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 455667889899999999998888 877666555443
No 92
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.49 E-value=2e-12 Score=118.62 Aligned_cols=184 Identities=14% Similarity=0.052 Sum_probs=149.6
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHH
Q 021653 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI 97 (309)
Q Consensus 18 ~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~ 97 (309)
+.++|+.++.......... ...+.+.+.+++.+++|+|+.|.++++++..+...+..++-|++.||+ |.|++..++++
T Consensus 10 ~~~~~~L~~S~~af~v~F~-VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~~ 87 (417)
T COG2223 10 RIARRNLWLSTLAFDVGFM-VWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSML 87 (417)
T ss_pred cchhHHHHHHHHHHHHHHH-HHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHHH
Confidence 5556666665554444444 444566677888899999999999999999999999999999999996 99999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHH
Q 021653 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (309)
Q Consensus 98 l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 177 (309)
+..+-.+.++++... .+.+.+++...++|++.|- .+...++.+..||++ ++|..
T Consensus 88 l~~IP~~~~~~a~~~-------------------~~~~~ll~~gll~G~~Gas-Fav~m~~~s~~fP~~------~qG~A 141 (417)
T COG2223 88 LLLIPCLGLAFAVTY-------------------PSTWQLLVIGLLLGLAGAS-FAVGMPNASFFFPKE------KQGLA 141 (417)
T ss_pred HHHHHHHHHHHHccC-------------------CchHHHHHHHHHHhcccce-ehcccccccccCChh------hhhHH
Confidence 999988888888722 2457888888888886554 456678899999998 79999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccc---chhhhhHHHHHHHHHHHHHHHhCcce
Q 021653 178 FNWYYFVMGAAILVAVTVLVYIQDNIG---WGWGLGIPTFAMFLSIIAFLIGYPLY 230 (309)
Q Consensus 178 ~~~~~~~~~iG~~l~~~~~~~i~~~~g---w~~~f~i~~~~~~~~~~~~~~~~~~~ 230 (309)
.+++- ..|+|..+...+...+....| |+....+..+..++..+.+++.....
T Consensus 142 lGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~ 196 (417)
T COG2223 142 LGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDV 196 (417)
T ss_pred HHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99988 899999999999999888888 99888888888877777777665443
No 93
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.48 E-value=1.1e-11 Score=119.52 Aligned_cols=175 Identities=13% Similarity=0.095 Sum_probs=133.9
Q ss_pred CccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhc----cchHHH-HHH
Q 021653 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY----AGRFWT-ITI 94 (309)
Q Consensus 20 ~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~----~GR~~~-i~i 94 (309)
.||....++...+......+.....++.+++ +.|.+..+.+...... ..+++.++.|+++||+ +|||+. +.+
T Consensus 10 ~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~-~~g~~~~~ig~~~~~~--~~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~ 86 (491)
T PRK11010 10 QQPNSAILLILGFASGLPLALTSGTLQAWMT-VENIDLKTIGFFSLVG--QAYVFKFLWSPLMDRYTPPFLGRRRGWLLA 86 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHH--HHHHHHHHHHHHHHcccccCCCCchHHHHH
Confidence 4555666777777777777767777888875 5589988888763222 2236889999999993 299986 556
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhh
Q 021653 95 ASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKT 174 (309)
Q Consensus 95 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r 174 (309)
+.+...++.+++++.. +..+.+.+.+.+++.+++.+...+...++..|.+|++ +|
T Consensus 87 ~~i~~~~~~~~~a~~~-------------------~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~------~r 141 (491)
T PRK11010 87 TQLLLLVAIAAMGFLE-------------------PGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE------ER 141 (491)
T ss_pred HHHHHHHHHHHHHHcC-------------------CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh------hh
Confidence 6666666666665543 1126777888888999999999999999999999976 79
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhc-cccchhhhhHHHHHHHHHHHH
Q 021653 175 WKYFNWYYFVMGAAILVAVTVLVYIQD-NIGWGWGLGIPTFAMFLSIIA 222 (309)
Q Consensus 175 ~~~~~~~~~~~~iG~~l~~~~~~~i~~-~~gw~~~f~i~~~~~~~~~~~ 222 (309)
++..++...+..+|..+++.+..++.+ ..|||..|++.+++.++..+.
T Consensus 142 g~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~ 190 (491)
T PRK11010 142 GAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIA 190 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888888 579999999988776655443
No 94
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.48 E-value=2.5e-13 Score=123.35 Aligned_cols=165 Identities=16% Similarity=0.103 Sum_probs=142.4
Q ss_pred hcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccc
Q 021653 52 QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANK 131 (309)
Q Consensus 52 ~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (309)
.++-++++.+.+.+.......+..++.|.+.||+ |+|-.+++|..+....++++++..
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg~--------------------- 157 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFGN--------------------- 157 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHcc---------------------
Confidence 3456778899999999999999999999999995 999999999999999999999988
Q ss_pred hhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhhH
Q 021653 132 GQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGI 211 (309)
Q Consensus 132 ~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i 211 (309)
++++++++|.++|+|.++..++..++++|.||++. +|++.++.....+.+|-++||.++|.+-+..|.+.+|++
T Consensus 158 -sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~-----er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlV 231 (464)
T KOG3764|consen 158 -SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDN-----ERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLV 231 (464)
T ss_pred -hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccch-----hhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHH
Confidence 88899999999999999999999999999999986 799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hCcceec--cCCCCChhHHHH
Q 021653 212 PTFAMFLSIIAFLI-GYPLYRN--LDPAGSPFTRLL 244 (309)
Q Consensus 212 ~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~ 244 (309)
.++++++...+-++ ..|.-.. ..+++.+..++.
T Consensus 232 L~~v~Lld~~L~l~vi~p~~~~~~~~~~~~~~~~Ll 267 (464)
T KOG3764|consen 232 LAIVLLLDGALQLLVIEPTEMDPDSTEQGTPMWSLL 267 (464)
T ss_pred HHHHHHHHHHHHHheeCccccCccccccCccHHHHH
Confidence 99998886655443 3343222 234454555553
No 95
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.48 E-value=4.2e-12 Score=127.09 Aligned_cols=131 Identities=11% Similarity=0.017 Sum_probs=105.0
Q ss_pred HHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHH
Q 021653 64 LTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLL 143 (309)
Q Consensus 64 ~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 143 (309)
..+..++..++.+++|+++||+ |||++++++.++..++.+++.+.. +...+++.+++
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~~----------------------s~~~ll~~~~l 657 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFGN----------------------SESAMIALLCL 657 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHc----------------------cHHHHHHHHHH
Confidence 4455677788999999999996 999999999888888877777655 44456666677
Q ss_pred HHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHH
Q 021653 144 AALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAF 223 (309)
Q Consensus 144 ~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~ 223 (309)
.+++.++..+...++++|.+|++ .|++.+++.+....+|++++|.+++.+.+. +...+|++.+++.+++.++.
T Consensus 658 ~g~~~~~~~~~~~a~~aEl~Pt~------~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~ 730 (742)
T TIGR01299 658 FGGLSIAAWNALDVLTVELYPSD------KRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLA 730 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHH
Confidence 78877888888999999999987 799999999999999999999999877653 45567777766666655443
Q ss_pred H
Q 021653 224 L 224 (309)
Q Consensus 224 ~ 224 (309)
+
T Consensus 731 ~ 731 (742)
T TIGR01299 731 L 731 (742)
T ss_pred H
Confidence 3
No 96
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.48 E-value=1.2e-11 Score=116.14 Aligned_cols=166 Identities=13% Similarity=0.092 Sum_probs=125.9
Q ss_pred HHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhc----cchHH-HHHHHHHHHHHHH
Q 021653 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY----AGRFW-TITIASIIYQIGM 103 (309)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~----~GR~~-~i~i~~~l~~~g~ 103 (309)
...+.+...+.....-+|.|+++ .|++..+.+.+...... .+..++.|+++||+ +|||| .+.++.++..++.
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~ 82 (402)
T PRK11902 6 LLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASI 82 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHH
Confidence 34455555555566778999975 59999999988666554 68899999999995 27776 6777777776666
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHH
Q 021653 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (309)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~ 183 (309)
..+.+.. ...+.+.+++..++.++..+...+...++.+|.+|++ +|++..++...
T Consensus 83 ~~l~~~~-------------------~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~------~r~~~~~~~~~ 137 (402)
T PRK11902 83 AAMAFCP-------------------PHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPE------ERGAGAAVKVL 137 (402)
T ss_pred HHHHhcC-------------------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh------hhhHHHHHHHH
Confidence 6665432 1125566666666678888888899999999999877 69999999998
Q ss_pred HHHHHHHHHHHHHHHhhcc-ccchhhhhHHHHHHHHHHHH
Q 021653 184 VMGAAILVAVTVLVYIQDN-IGWGWGLGIPTFAMFLSIIA 222 (309)
Q Consensus 184 ~~~iG~~l~~~~~~~i~~~-~gw~~~f~i~~~~~~~~~~~ 222 (309)
+.++|..+++.+..++.+. .|||..|++.+++.++..+.
T Consensus 138 g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 138 GYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 9999999998888888775 59999999988766554443
No 97
>PTZ00207 hypothetical protein; Provisional
Probab=99.47 E-value=1.1e-11 Score=120.81 Aligned_cols=175 Identities=13% Similarity=0.057 Sum_probs=126.6
Q ss_pred CCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHH
Q 021653 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (309)
Q Consensus 19 ~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l 98 (309)
++|......+.++.+... .|++.. ....+.+++|++..+.+.+.++.. ...++.+++|+++||+ |||+++.++.++
T Consensus 25 ~Rw~~lva~~~~~~~~g~-~y~fsv-~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~-G~R~vllig~ll 100 (591)
T PTZ00207 25 RRFALLVLGAFCSICTSF-MYAFNL-ISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYL-GPRPIFVLSMTV 100 (591)
T ss_pred chHHHHHHHHHHHHHHHH-HHHHHH-HHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHh-CcHHHHHHHHHH
Confidence 345444433344433333 234443 345678899999999988877643 3345667789999996 999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHH
Q 021653 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (309)
Q Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~ 178 (309)
+.+|.++++++.. . .. ..+.+.+++.|++.|+|.+...+.....+.++||. +||...
T Consensus 101 ~~iG~ll~ala~~-~-~i--------------~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~-------~RG~a~ 157 (591)
T PTZ00207 101 FCLGTLLFALTFQ-E-VI--------------EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPS-------NRGAVV 157 (591)
T ss_pred HHHHHHHHHHHhc-c-cc--------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChh-------hhHHHH
Confidence 9999999988630 0 00 12788899999999999999988888899999984 589999
Q ss_pred HHHHHHHHHHHHH-HHHHHHHhhccccchhhhhHHHHHHHHHHHH
Q 021653 179 NWYYFVMGAAILV-AVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (309)
Q Consensus 179 ~~~~~~~~iG~~l-~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~ 222 (309)
++...+.++|+.+ +++..+++.+ +|+..|++.+++.++..++
T Consensus 158 Gi~~~~~gLGsaI~~~l~~~l~~~--~~~~~fl~l~vl~~vv~ll 200 (591)
T PTZ00207 158 AIMKTFTGLGSAILGSIQLAFFSD--NTSAYFFFLMSFALVVGIL 200 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHH
Confidence 9999999999975 5555556553 5776776666655544433
No 98
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.47 E-value=1.1e-11 Score=116.17 Aligned_cols=175 Identities=11% Similarity=0.022 Sum_probs=132.2
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Q 021653 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (309)
Q Consensus 24 ~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~ 103 (309)
.+.+.....+..+.++++..+++.|+++ +|++..+++...+.+.++..++.++.|+++||+ |||+.+.++..+..++.
T Consensus 207 ~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~~~ 284 (393)
T PRK09705 207 AWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLVGF 284 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHHH
Confidence 4444445555667777888899999975 899999999999999999999999999999996 99999998887777776
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHH
Q 021653 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (309)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~ 183 (309)
+++.... . +...+. ..+.|+|.+...+.......+.+++++ .+++.+++.+.
T Consensus 285 ~~~~~~~---~------------------~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~-----~~g~~~g~~~~ 336 (393)
T PRK09705 285 CGFIWLP---L------------------QLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPA-----IAGKLVAFMQG 336 (393)
T ss_pred HHHHHcc---c------------------hHHHHH--HHHHHHhccchHHHHHHHHHhhcCCHH-----HHHHHHHHHHH
Confidence 6544222 0 111121 245678888877777667777775432 68999999999
Q ss_pred HHHHHHHHHHHHHHHhhcccc-chhhhhHHHHHHHHHHHHHHHhCc
Q 021653 184 VMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAFLIGYP 228 (309)
Q Consensus 184 ~~~iG~~l~~~~~~~i~~~~g-w~~~f~i~~~~~~~~~~~~~~~~~ 228 (309)
..++++.++|.+.+++.+..| |+..|.+.+++.++..+..+...|
T Consensus 337 ~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (393)
T PRK09705 337 IGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAP 382 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999876 778888877776666555444443
No 99
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.47 E-value=6.4e-12 Score=115.74 Aligned_cols=154 Identities=13% Similarity=0.120 Sum_probs=114.4
Q ss_pred HHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhc----cchHHHH-HHHHHHHHHHHHHHHHHhhcCCCCCC
Q 021653 44 NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY----AGRFWTI-TIASIIYQIGMICLTISAILPQLRPP 118 (309)
Q Consensus 44 ~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~----~GR~~~i-~i~~~l~~~g~~~~~~~~~~~~~~~~ 118 (309)
...+.+.+++|+|..+.+..... ..... ..++.|+++||+ +||||.+ +.+.++..+....+.+..
T Consensus 9 ~~~~~~~~~~g~s~~~~g~~~~~-~~~~~-~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~-------- 78 (356)
T TIGR00901 9 NTLPYWLRSKNVSLKTIGFFSLV-GLPYS-LKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV-------- 78 (356)
T ss_pred hHHHHHHHHcCCCHHHHHHHHHH-HHHHH-HHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC--------
Confidence 33444456889999999988644 33333 388999999996 4999975 555655555555554432
Q ss_pred CCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 021653 119 PCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVY 198 (309)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~ 198 (309)
+..+.+.++...++.+++.+...+...++++|.+|++ +|+...++...+.++|.++++.+.+.
T Consensus 79 -----------~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~------~r~~~~~~~~~~~~~G~~~~~~l~~~ 141 (356)
T TIGR00901 79 -----------PSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDE------ELGYGSTIYIVGYRAGMLLSGSLALV 141 (356)
T ss_pred -----------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh------hhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 1124555565566778888888899999999999876 79999999999999999999999988
Q ss_pred hhcccc--------chhhhhHHHHHHHHHHHHHH
Q 021653 199 IQDNIG--------WGWGLGIPTFAMFLSIIAFL 224 (309)
Q Consensus 199 i~~~~g--------w~~~f~i~~~~~~~~~~~~~ 224 (309)
+.+..+ ||..|++.+++.++..+..+
T Consensus 142 l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~ 175 (356)
T TIGR00901 142 LASPEFANTGLITLWGYIFFWTALLILPGLLVTL 175 (356)
T ss_pred HhhhcccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 887777 99999988887766554433
No 100
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.47 E-value=3.4e-12 Score=122.79 Aligned_cols=150 Identities=19% Similarity=0.182 Sum_probs=114.3
Q ss_pred hhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 021653 40 GFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPP 119 (309)
Q Consensus 40 ~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~ 119 (309)
....++|.|+++++|++..+++.+.+...++..++.+++|+++||+ |||+++.++.++..++.++.....
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~--------- 362 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAIG--------- 362 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhcc---------
Confidence 4567889999889999999999999999999999999999999996 999998887766555544333221
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 021653 120 CEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI 199 (309)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i 199 (309)
..+.+.+.+..++.+....+..+..+.+..|.+|++ +|++.+++++...++|+.++|.+.+++
T Consensus 363 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~g~~lgp~l~g~l 425 (496)
T PRK03893 363 -----------GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTE------QRAAGLGFTYNVGALGGALAPILGALI 425 (496)
T ss_pred -----------ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHH------HhhcccchhhhhhhHHHHHHHHHHHHH
Confidence 113333333334333333344567778889999976 799999999999999999999999999
Q ss_pred hccccchhhhhHHHHHH
Q 021653 200 QDNIGWGWGLGIPTFAM 216 (309)
Q Consensus 200 ~~~~gw~~~f~i~~~~~ 216 (309)
.+..||+..+...+...
T Consensus 426 ~~~~g~~~~~~~~~~~~ 442 (496)
T PRK03893 426 AQRLDLGTALASLSFSL 442 (496)
T ss_pred hccCChHHHHHHHHHHH
Confidence 99999987776554433
No 101
>PRK12382 putative transporter; Provisional
Probab=99.45 E-value=6.7e-12 Score=117.19 Aligned_cols=160 Identities=16% Similarity=0.183 Sum_probs=126.0
Q ss_pred HHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcC
Q 021653 34 EKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILP 113 (309)
Q Consensus 34 ~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~ 113 (309)
.......+..+++.|+++ .|++. .+.....+..+..++.++.|++.||+ |||+.+.++..+..++.+++....
T Consensus 228 ~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~--- 300 (392)
T PRK12382 228 QGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLAP--- 300 (392)
T ss_pred HHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHcc---
Confidence 344455556667778754 56654 34455566677788899999999996 999999998888888776655443
Q ss_pred CCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHH
Q 021653 114 QLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAV 193 (309)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~ 193 (309)
+...+++..++.|++.+...+.......|.+|++ +|++..++++...++|..+++
T Consensus 301 -------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~~~~~~~g~~ig~ 355 (392)
T PRK12382 301 -------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQ------VRGTALGGYAAFQDIAYGVSG 355 (392)
T ss_pred -------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 4556667788889998888888888888888876 799999999999999999999
Q ss_pred HHHHHhhccccchhhhhHHHHHHHHHHHHHHH
Q 021653 194 TVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (309)
Q Consensus 194 ~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~ 225 (309)
.+.+++.+..||+..|.+.+++.+++.++.+.
T Consensus 356 ~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 356 PLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999988877777665543
No 102
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.44 E-value=6.3e-16 Score=146.91 Aligned_cols=157 Identities=18% Similarity=0.199 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHH
Q 021653 58 TKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAIL 137 (309)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (309)
...++..+...++..+|++++|+++||+ |||++++++.++.++|.++..++.. ..+...+
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~-------------------~~~~~~~ 105 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPS-------------------YNNFWML 105 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccc-ccccccccccccccccccccccccc-------------------ccccccc
Confidence 3467888999999999999999999996 9999999999999999988887651 1256788
Q ss_pred HHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc---cccchhhhhHHHH
Q 021653 138 YVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD---NIGWGWGLGIPTF 214 (309)
Q Consensus 138 ~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~---~~gw~~~f~i~~~ 214 (309)
.++|++.|+|.|+..+..+.++.|..|++ .|+.+..+++.+..+|.+++..+...+.+ ..+||..+.+.++
T Consensus 106 ~~~R~~~G~~~g~~~~~~~~~~~E~~~~~------~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~ 179 (451)
T PF00083_consen 106 LIGRFLIGFGIGGAYVVSPIYISEIAPPK------HRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAI 179 (451)
T ss_pred ccccccccccccccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999987 68999999999889998888766443332 3459988887776
Q ss_pred HHHHH--HHHHHHhCcceeccCCCCChh
Q 021653 215 AMFLS--IIAFLIGYPLYRNLDPAGSPF 240 (309)
Q Consensus 215 ~~~~~--~~~~~~~~~~~~~~~~~~~~~ 240 (309)
..++. ...+.+++|+|...+.+.++.
T Consensus 180 ~~l~~~~~~~~~pESP~wL~~~~~~~~A 207 (451)
T PF00083_consen 180 PSLLVLLLRFFLPESPRWLLSKGRDEEA 207 (451)
T ss_pred ccccccccccccccccceeccccccccc
Confidence 65332 335678889987665554443
No 103
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.44 E-value=1.1e-11 Score=114.15 Aligned_cols=179 Identities=13% Similarity=0.035 Sum_probs=126.3
Q ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHH-HHHHHHHHH
Q 021653 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWT-ITIASIIYQ 100 (309)
Q Consensus 22 ~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~-i~i~~~l~~ 100 (309)
+..+......++.....+....+++.|+++.+|.+..+.+.+.+...++..++.+++|+++||+ |||+. +........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHH
Confidence 3455566667777777778888899999999999999999999999999999999999999996 98861 111111122
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHH
Q 021653 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (309)
Q Consensus 101 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 180 (309)
++.+.......... .............+.+.+.+ ..+....+.+|.+|++ .|++..++
T Consensus 294 ~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~g~~~~~ 351 (399)
T TIGR00893 294 IAGLVLSLLMFATN---------------YVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGN------IAGLTGGL 351 (399)
T ss_pred HHHHHHHHHHHHhc---------------cchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChh------HHHHHHHH
Confidence 22111111110000 00022222222333333443 6788899999999987 79999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccc-chhhhhHHHHHHHHHHHHH
Q 021653 181 YYFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAF 223 (309)
Q Consensus 181 ~~~~~~iG~~l~~~~~~~i~~~~g-w~~~f~i~~~~~~~~~~~~ 223 (309)
++...++|..+++.+.+++.+..| |+..|.+.+++.+++.+..
T Consensus 352 ~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 352 INSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888 9999888877776665544
No 104
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.44 E-value=1.8e-11 Score=111.83 Aligned_cols=137 Identities=14% Similarity=0.102 Sum_probs=118.9
Q ss_pred HhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 021653 39 VGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPP 118 (309)
Q Consensus 39 ~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~ 118 (309)
+.....+.+.+++.++++..+++.+...+.+++.++++..|++.+|+ |+|+.+++|..++.+|+.+..-++
T Consensus 29 ~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~lF~pAa-------- 99 (422)
T COG0738 29 TCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAALFWPAA-------- 99 (422)
T ss_pred hhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhhhh--------
Confidence 44566788899999999999999999999999999999999999996 999999999999999999987655
Q ss_pred CCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 021653 119 PCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVY 198 (309)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~ 198 (309)
+...+.+|.+++++.+.|.|...+...++++...+++ .-..-.+..+....+|+.++|+++++
T Consensus 100 -----------~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~------~a~~rlnl~q~fn~lGa~~gp~~g~~ 162 (422)
T COG0738 100 -----------SSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPE------SAAFRLNLAQAFNGLGAILGPLLGSS 162 (422)
T ss_pred -----------hhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCch------hHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 2347889999999999999999999999999999975 23444556666788899999998877
Q ss_pred hhc
Q 021653 199 IQD 201 (309)
Q Consensus 199 i~~ 201 (309)
+..
T Consensus 163 lil 165 (422)
T COG0738 163 LIL 165 (422)
T ss_pred HHH
Confidence 654
No 105
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.44 E-value=8.9e-12 Score=117.84 Aligned_cols=173 Identities=9% Similarity=0.003 Sum_probs=129.7
Q ss_pred HHHHHHHHHHHhhHHHHHHHhHHhcCCC--------HHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHH
Q 021653 29 SNEVCEKLAVVGFNTNMISYLTTQLHMP--------LTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (309)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s--------~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~ 100 (309)
+..++..........+++.|+. +.+.+ ....+.+.+...+...++.++.|+++||+ |||+++.++.++..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~~~~~ 292 (418)
T TIGR00889 215 FFSMLLGAPLQITNIFGNGFLH-EFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSLVAWA 292 (418)
T ss_pred HHHHHHHhHHHHHHHhHHHHHH-HhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHH
Confidence 3333433333344456677775 34433 35668888888888889999999999996 99999999999888
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHH
Q 021653 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (309)
Q Consensus 101 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 180 (309)
++..++..... +......+++..++.|++.+...+....+++|.+|++ .|++..++
T Consensus 293 v~~~l~~~~~~------------------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~------~~g~~~g~ 348 (418)
T TIGR00889 293 LRFGFFAYGDP------------------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVH------IRASAQGL 348 (418)
T ss_pred HHHHHHHHcCc------------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH------HHHHHHHH
Confidence 87666654320 0113456677888999999988888899999999987 79999999
Q ss_pred HH-HHHHHHHHHHHHHHHHhhcc------ccchhhhhHHHHHHHHHHHHHHHhC
Q 021653 181 YY-FVMGAAILVAVTVLVYIQDN------IGWGWGLGIPTFAMFLSIIAFLIGY 227 (309)
Q Consensus 181 ~~-~~~~iG~~l~~~~~~~i~~~------~gw~~~f~i~~~~~~~~~~~~~~~~ 227 (309)
++ ...++|..++|.+.+++.+. .||+..|.+.+++.++..++++...
T Consensus 349 ~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~ 402 (418)
T TIGR00889 349 FTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFF 402 (418)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 97 56789999999999998876 4699999888777666655554443
No 106
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.44 E-value=1.4e-12 Score=102.65 Aligned_cols=131 Identities=11% Similarity=0.178 Sum_probs=111.1
Q ss_pred HHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHH
Q 021653 66 NFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAA 145 (309)
Q Consensus 66 ~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 145 (309)
.+.++..++.++.|+++||+ |||+.+..+..+..++.+...... +.+.+.+.+++.|
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~g 62 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALSS----------------------NITVLIIARFLQG 62 (141)
T ss_pred eehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHhc----------------------cHHHHHHHHHHHH
Confidence 45567778899999999996 999999999888888877766554 6677888889999
Q ss_pred HhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHH
Q 021653 146 LGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (309)
Q Consensus 146 ig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~ 225 (309)
++.+...+....+..|.+|++ +|++..+..+...++|..+++.+.+++.+..+|++.+++.++..++..+....
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 63 FGAAFALVAGAALIADIYPPE------ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAF 136 (141)
T ss_pred HHHHHHHHhHHHHHHHHCChh------hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999987 69999999999999999999999999988889999998877766665544433
No 107
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.44 E-value=1.1e-11 Score=115.86 Aligned_cols=163 Identities=11% Similarity=0.018 Sum_probs=124.3
Q ss_pred HHHHHHhhHHHHHHHhHHhcCCCHH---HHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHh
Q 021653 34 EKLAVVGFNTNMISYLTTQLHMPLT---KAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISA 110 (309)
Q Consensus 34 ~~~~~~~~~~~l~~yl~~~~~~s~~---~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~ 110 (309)
..+....+...++.|+.+..+.... ..+.+.+...++..++.++.|+++||+ |||+.+.++..+..++.+.+....
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~ 309 (408)
T PRK09874 231 IQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPMSFVQ 309 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHHHHhc
Confidence 3334344556677777765443221 234445556667778888999999996 999999988887776666555443
Q ss_pred hcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHH
Q 021653 111 ILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAIL 190 (309)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~ 190 (309)
+.+.+++.+++.|++.+...+.......+..|++ ++++.+++++...++|..
T Consensus 310 ----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~g~~ 361 (408)
T PRK09874 310 ----------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQ------IAGRIFSYNQSFRDIGNV 361 (408)
T ss_pred ----------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcc------cceeeehHHHHHHHHHHH
Confidence 5566777888899999999888888888887766 689999999999999999
Q ss_pred HHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHH
Q 021653 191 VAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (309)
Q Consensus 191 l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~ 225 (309)
++|.+.+.+.+..||+..|++.+++.+++.+..+.
T Consensus 362 ~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 362 TGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred hhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988887777665544
No 108
>PRK03545 putative arabinose transporter; Provisional
Probab=99.44 E-value=3.1e-11 Score=112.73 Aligned_cols=170 Identities=11% Similarity=-0.003 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Q 021653 27 IFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICL 106 (309)
Q Consensus 27 i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~ 106 (309)
.....++.....+....+++.|+.+.+|++..+++.+.+...++..++.++.|+++||+ |||+. .++..+..++..++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~-~~~~~~~~~~~~~l 287 (390)
T PRK03545 210 LYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFL-LIAIALLLVCLLLL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHH-HHHHHHHHHHHHHH
Confidence 33344444455555667788888888999999999999999999999999999999996 98764 44444444443333
Q ss_pred HHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHH
Q 021653 107 TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 186 (309)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~ 186 (309)
.... .+...+++..++.|++.+...+.....+.+..|+ .+++..++++...+
T Consensus 288 ~~~~---------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~ 339 (390)
T PRK03545 288 LPAA---------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPD-------ATDVAMALFSGIFN 339 (390)
T ss_pred HHHh---------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCC-------cHHHHHHHHHHHHH
Confidence 2211 1455666777788888877777777777777664 47888898888899
Q ss_pred HHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHh
Q 021653 187 AAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIG 226 (309)
Q Consensus 187 iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~ 226 (309)
+|..+|+.+.+++.+..|++..|++.+++.+++++..+..
T Consensus 340 ~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 340 IGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred HHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999888887777665443
No 109
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.44 E-value=9.8e-12 Score=118.62 Aligned_cols=176 Identities=15% Similarity=0.110 Sum_probs=119.9
Q ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhcc-chHHHH-HHHHHHH
Q 021653 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYA-GRFWTI-TIASIIY 99 (309)
Q Consensus 22 ~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~-GR~~~i-~i~~~l~ 99 (309)
+..+...+..++.....++...++|.|++++.|++..+++.....+.++..++.+++|+++||+. |||+.. .+...+.
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~ 332 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLV 332 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHH
Confidence 34555556666666777888889999999999999999888888888888899999999999951 444432 2222333
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHH
Q 021653 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (309)
Q Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~ 179 (309)
.++.+++.... ..+....++..++.|.+..+.......+..|.+|++ .||+..+
T Consensus 333 ~~~~~~~~~~~--------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~g~~~g 386 (452)
T PRK11273 333 TIATIVYWLNP--------------------AGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKK------AAGTAAG 386 (452)
T ss_pred HHHHHHHHHhc--------------------ccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChh------hhhhHHH
Confidence 33333322211 002333334444444433332233344567889887 7999999
Q ss_pred HHHHHHHHHHHH-HHHHHHHhhccccchhhhhHHHHHHHHHHHHH
Q 021653 180 WYYFVMGAAILV-AVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAF 223 (309)
Q Consensus 180 ~~~~~~~iG~~l-~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~ 223 (309)
+.+...++|+.+ +|.+.+++.+..||+..|++.++..+++++..
T Consensus 387 ~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~ 431 (452)
T PRK11273 387 FTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILL 431 (452)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 998888888655 79999999999999999988887766665443
No 110
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.43 E-value=6.7e-12 Score=116.80 Aligned_cols=157 Identities=15% Similarity=0.119 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Q 021653 27 IFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICL 106 (309)
Q Consensus 27 i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~ 106 (309)
++....+..+..+....+++.|+.+++|++..+.+.+.+...++..++.++.|+++||+ |||+.+.++.++..+..+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~ 321 (405)
T TIGR00891 243 LVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLIIPV 321 (405)
T ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHHHHH
Confidence 33444444555556677889999999999999999999999999999999999999996 99999888776543322221
Q ss_pred HHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHH
Q 021653 107 TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 186 (309)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~ 186 (309)
.... .+.+.+.++.++.++..++..+..+.++.|.+|++ .|++..+..+...+
T Consensus 322 ~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~~~ 374 (405)
T TIGR00891 322 FAIG---------------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTD------QRAAGLGFTYQLGN 374 (405)
T ss_pred HHhC---------------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcc------hhHHHhhHHHHHHH
Confidence 1111 13445556666677777777788889999999987 79999999999999
Q ss_pred HHHHHHHHHHHHhhcccc-chhhhhH
Q 021653 187 AAILVAVTVLVYIQDNIG-WGWGLGI 211 (309)
Q Consensus 187 iG~~l~~~~~~~i~~~~g-w~~~f~i 211 (309)
+|+.++|.+.+++.+..| |+..+..
T Consensus 375 ~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 375 LGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHHHHhccccchhHHh
Confidence 999999999999999888 7665544
No 111
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.43 E-value=1.5e-11 Score=114.67 Aligned_cols=157 Identities=12% Similarity=-0.061 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHH----HHHHHHHHH
Q 021653 27 IFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTIT----IASIIYQIG 102 (309)
Q Consensus 27 i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~----i~~~l~~~g 102 (309)
+.+..++...++.....++|.|+ +++|+|..+.+.+.+.+.+...+++++.|.++||+ ||++... ++..+..+
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l-~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~~~- 85 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWL-KGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIFAA- 85 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHH-
Confidence 33334444444444556677887 47899999999999999999999999999999996 9854332 22211111
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHH
Q 021653 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (309)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~ 182 (309)
.+...+. +.+.+++.+.+.+.+.+...+...++..|. + + +|+..++...
T Consensus 86 -~~~~~~~----------------------~~~~l~~~~~l~~~~~~~~~p~~~al~~~~-~-~------~~~~~~g~~~ 134 (382)
T TIGR00902 86 -AFSAGAH----------------------NAWLLFIAIGLFALFFSAGMPIGDALANTW-Q-K------QFGLDYGKVR 134 (382)
T ss_pred -HHHHhhh----------------------hHHHHHHHHHHHHHHHccchhHHHHHHHHH-H-H------HcCCCccHHH
Confidence 1122222 678888889989988888877777775442 2 2 5777888888
Q ss_pred HHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHH
Q 021653 183 FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMF 217 (309)
Q Consensus 183 ~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~ 217 (309)
...++|..++|.+++++.+..||+..|++..++.+
T Consensus 135 ~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~ 169 (382)
T TIGR00902 135 LIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLA 169 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHH
Confidence 89999999999999999999999999887665533
No 112
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.43 E-value=1.8e-11 Score=114.62 Aligned_cols=164 Identities=10% Similarity=-0.040 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Q 021653 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTI 108 (309)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~ 108 (309)
...++.....+....++|.|+. +.|++..+.+.+.....++..++.++.|+++||+ |||+.+.++.+...++.+.+..
T Consensus 227 ~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~ 304 (406)
T PRK11551 227 ISYFFTLIVLYFLLNWLPSLLV-GQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLAALAA 304 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHh
Confidence 3334444556667777888886 4799999999999999999999999999999996 9999988866655555444433
Q ss_pred HhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHH
Q 021653 109 SAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAA 188 (309)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG 188 (309)
.. +...+++..++.|++.++..+....+..|.+|++ .|++..++++....+|
T Consensus 305 ~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~g~~~g~~~~~~~~g 356 (406)
T PRK11551 305 AP----------------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQ------VRGTGVGAAVAVGRLG 356 (406)
T ss_pred cC----------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchh------hhhhhhhHHHHhhhHH
Confidence 22 3444555666778888778888889999999987 7999999999999999
Q ss_pred HHHHHHHHHHhhcccc-chhhhhHHHHHHHHHHHH
Q 021653 189 ILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIA 222 (309)
Q Consensus 189 ~~l~~~~~~~i~~~~g-w~~~f~i~~~~~~~~~~~ 222 (309)
..++|.+.+++.+..+ |...+++...+.+++.+.
T Consensus 357 ~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 391 (406)
T PRK11551 357 SMAGPLLAGQLLALGRSTVGVIGASIPVILVAALA 391 (406)
T ss_pred HHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHH
Confidence 9999999999887654 455555554444444433
No 113
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.43 E-value=1.4e-11 Score=116.04 Aligned_cols=160 Identities=7% Similarity=-0.060 Sum_probs=129.0
Q ss_pred HHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021653 38 VVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRP 117 (309)
Q Consensus 38 ~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~ 117 (309)
.+++..++|.|+++.+|++....+.+.+...++..++.++.++++||. ++++.+..+.++..++.+++....
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~------- 310 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLMP------- 310 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHccc-------
Confidence 345666788999888999999999999999999999999999999995 888888888777777766555433
Q ss_pred CCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 021653 118 PPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLV 197 (309)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~ 197 (309)
+.....+..++.|++.+...+...+++.|.+|++ .|++..++++...++|..+++.+.+
T Consensus 311 ---------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~g~~~g~~~~~~~~g~~~g~~l~G 369 (417)
T PRK10489 311 ---------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDE------MLGRINGLWTAQNVTGDAIGAALLG 369 (417)
T ss_pred ---------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHH------HHHHHHHHHHHHHhhhHhHHHHHHH
Confidence 4555666777888888877777778889999976 7999999999999999999999999
Q ss_pred HhhccccchhhhhHHHHHHHHHHHHHHHh
Q 021653 198 YIQDNIGWGWGLGIPTFAMFLSIIAFLIG 226 (309)
Q Consensus 198 ~i~~~~gw~~~f~i~~~~~~~~~~~~~~~ 226 (309)
++.+..|++..+++.+++.++..++.+..
T Consensus 370 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 370 GLGAMMTPVASASASGFGLLIIGVLLLLV 398 (417)
T ss_pred HHHHHhchhhHHHHHHHHHHHHHHHHHHh
Confidence 99999998888877776655544444443
No 114
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.42 E-value=6.7e-12 Score=118.67 Aligned_cols=174 Identities=14% Similarity=0.145 Sum_probs=126.1
Q ss_pred HHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhc---cchHH-HHHHHHHHHHHHHHHHH
Q 021653 32 VCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY---AGRFW-TITIASIIYQIGMICLT 107 (309)
Q Consensus 32 ~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~---~GR~~-~i~i~~~l~~~g~~~~~ 107 (309)
+..++.+..+..+++.|+++++|+++.+++.+.++..+...+..++.|+++||. +|||| .++++.+...++.+++.
T Consensus 9 ~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~ 88 (437)
T TIGR00792 9 FGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLF 88 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHH
Confidence 344555566677899999999999999999999999999999999999999983 58855 56677777777766665
Q ss_pred HHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHH
Q 021653 108 ISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGA 187 (309)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~i 187 (309)
... ... .......+++.+++.+++.+....+..++.+|..++.+ +|++..++.+...++
T Consensus 89 ~~~---~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-----~R~~~~~~~~~~~~~ 147 (437)
T TIGR00792 89 TTP---DFS-------------ATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPR-----ERESLSTFRRFGATL 147 (437)
T ss_pred hCC---CCC-------------cchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHH-----HHHHHHHHHHHHHHH
Confidence 432 110 11234556666777888888888788888888875432 688888888888888
Q ss_pred HHHHHHHHHHHhh-------ccccchhhhhHHHHHHHHHHHHHHHh
Q 021653 188 AILVAVTVLVYIQ-------DNIGWGWGLGIPTFAMFLSIIAFLIG 226 (309)
Q Consensus 188 G~~l~~~~~~~i~-------~~~gw~~~f~i~~~~~~~~~~~~~~~ 226 (309)
|+.++..+.+.+. +..+|+..+.+.+++.++..++....
T Consensus 148 g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~ 193 (437)
T TIGR00792 148 GGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFG 193 (437)
T ss_pred HHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcC
Confidence 8877666544433 24589988888777666555444333
No 115
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.42 E-value=1.1e-11 Score=118.54 Aligned_cols=174 Identities=10% Similarity=0.038 Sum_probs=131.9
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhc-cchHHHHHHHHHHH--
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY-AGRFWTITIASIIY-- 99 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~-~GR~~~i~i~~~l~-- 99 (309)
..+..+...++..+.++....+++.|++ ++|++..+++.+.+...++..++.+++|+++||. +++++...++..+.
T Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 320 (455)
T TIGR00892 242 GFLVYLSGNVIMFLGFFAPIIFLVPYAK-DKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFN 320 (455)
T ss_pred hHHHHHHHHHHHHHHccchHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHH
Confidence 3444555556666677777788899986 4799999999999999999999999999999983 24444444333222
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHH
Q 021653 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (309)
Q Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~ 179 (309)
.++.++..... +.+.+++.+++.|++.+...++...+..|.+|++ ++++..+
T Consensus 321 ~l~~ll~~~~~----------------------~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~------~~g~~~g 372 (455)
T TIGR00892 321 GLTHLLCALAG----------------------DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQ------RFSSAVG 372 (455)
T ss_pred HHHHHHHHHhc----------------------hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHH------HHhhHHh
Confidence 23333333322 5566777888999999999999999999999876 7999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccc-cchhhhhHHHHHHHHHHHHHHH
Q 021653 180 WYYFVMGAAILVAVTVLVYIQDNI-GWGWGLGIPTFAMFLSIIAFLI 225 (309)
Q Consensus 180 ~~~~~~~iG~~l~~~~~~~i~~~~-gw~~~f~i~~~~~~~~~~~~~~ 225 (309)
.++...++|..++|.+.+++.+.. +|+..|++.+++.+++.+...+
T Consensus 373 ~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~~~ 419 (455)
T TIGR00892 373 LVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFLAI 419 (455)
T ss_pred HHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHHHH
Confidence 999999999999999999998877 5999999888877666544333
No 116
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.42 E-value=3.8e-11 Score=111.88 Aligned_cols=154 Identities=14% Similarity=0.165 Sum_probs=118.6
Q ss_pred HHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 021653 38 VVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRP 117 (309)
Q Consensus 38 ~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~ 117 (309)
+.....++|.|+++ .|.+..+.+.+.+...++..++.++.|+++||+ |||+.+..+.++..++.+... .
T Consensus 216 ~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~--~------- 284 (381)
T PRK03633 216 LGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML--S------- 284 (381)
T ss_pred HHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh--h-------
Confidence 33344567888864 699999999999999999999999999999996 999999888877777655433 1
Q ss_pred CCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 021653 118 PPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLV 197 (309)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~ 197 (309)
. ..+.....+.|++.+...+.......|..|++ +++...+.++...++|..++|.+.+
T Consensus 285 ---------------~-~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~------~~~~~~~~~~~~~~lG~~igp~~~G 342 (381)
T PRK03633 285 ---------------Q-AAMAPALFILGAAGFTLYPVAMAWACEKVEHH------ELVAMNQALLLSYTVGSLLGPSFTA 342 (381)
T ss_pred ---------------h-HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHH------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11234556667776777788888888888765 4666777777888999999999999
Q ss_pred HhhccccchhhhhHHHHHHHHHHHHHH
Q 021653 198 YIQDNIGWGWGLGIPTFAMFLSIIAFL 224 (309)
Q Consensus 198 ~i~~~~gw~~~f~i~~~~~~~~~~~~~ 224 (309)
++.+..||++.|.+.+.+.++..+..+
T Consensus 343 ~l~~~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 343 MLMQNYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 999999999999887777765544433
No 117
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.42 E-value=5.9e-12 Score=118.82 Aligned_cols=158 Identities=13% Similarity=0.060 Sum_probs=124.2
Q ss_pred HHhhHHHHHHHhHHhc---CCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 021653 38 VVGFNTNMISYLTTQL---HMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQ 114 (309)
Q Consensus 38 ~~~~~~~l~~yl~~~~---~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~ 114 (309)
+......++.|+.+.+ +.+..+.+.+.+...+...++.+++|+++||+ |||+.+.++.++..++.++..++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~~~~~---- 313 (420)
T PRK09528 239 YDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGSGFAT---- 313 (420)
T ss_pred HHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHHHhcc----
Confidence 3334445777776543 56666778888888888889999999999996 999999998888888877776654
Q ss_pred CCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHH-HHHHHHHHHHHHH
Q 021653 115 LRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW-YYFVMGAAILVAV 193 (309)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~-~~~~~~iG~~l~~ 193 (309)
+.+.+++.+.+.+++.+...+....++.|.+|++ .+++..+. ++...++|..+++
T Consensus 314 ------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~a~~~~~~~~~~~~lg~~ig~ 369 (420)
T PRK09528 314 ------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVR------LSATIYLVGFQFAKQLGAVFLS 369 (420)
T ss_pred ------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc------ceeeeeeehHHHHHHHHHHHHH
Confidence 5667777888889888888777888889999876 56666544 6677889999999
Q ss_pred HHHHHhhccccchhhhhHHHHHHHHHHHHHH
Q 021653 194 TVLVYIQDNIGWGWGLGIPTFAMFLSIIAFL 224 (309)
Q Consensus 194 ~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~ 224 (309)
.+.+++.+..||+..|.+.+++.++..++.+
T Consensus 370 ~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 400 (420)
T PRK09528 370 TLAGNLYDSIGFQGTYLILGGIVLLFTLISV 400 (420)
T ss_pred HHHHHHHHhhCchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987777665554433
No 118
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.41 E-value=2.2e-11 Score=128.62 Aligned_cols=141 Identities=13% Similarity=-0.004 Sum_probs=108.4
Q ss_pred HhcCCCH-HHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHH--HHHHHHHHHHHH-hhcCCCCCCCCCCcccc
Q 021653 51 TQLHMPL-TKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI--IYQIGMICLTIS-AILPQLRPPPCEGEQVC 126 (309)
Q Consensus 51 ~~~~~s~-~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~--l~~~g~~~~~~~-~~~~~~~~~~~~~~~~~ 126 (309)
...+.+. ...++..+++.+...++++++|+++||+ |||+++..... +.+.+..+..+. .
T Consensus 44 ~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~~~---------------- 106 (1140)
T PRK06814 44 GALGAYNNALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFHLN---------------- 106 (1140)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHHHh----------------
Confidence 3344433 3456677788899999999999999996 99997643222 222222222222 2
Q ss_pred ccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccccch
Q 021653 127 QEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWG 206 (309)
Q Consensus 127 ~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~gw~ 206 (309)
+.+.++++|+++|++.+...+...+++.|.++++ +++.+.++.+.+.++|.++||.+++++.+..+|+
T Consensus 107 ------s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~------~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~ 174 (1140)
T PRK06814 107 ------SVPLLFAALFLMGIHSALFGPIKYSILPDHLNKD------ELLGANALVEAGTFIAILLGTIIGGLATISGNFV 174 (1140)
T ss_pred ------hHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCcc------ccchhhHHHHHHHHHHHHHHHHHHHHHHhccccH
Confidence 7888999999999999999999999999999987 7999999999999999999999999999989999
Q ss_pred hhhhHHHHHHHHHH
Q 021653 207 WGLGIPTFAMFLSI 220 (309)
Q Consensus 207 ~~f~i~~~~~~~~~ 220 (309)
+.|....++.++++
T Consensus 175 ~~~~~~~~~~~~~~ 188 (1140)
T PRK06814 175 ILVALLMGIAVLGW 188 (1140)
T ss_pred HHHHHHHHHHHHHH
Confidence 88844444444333
No 119
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.41 E-value=2.3e-11 Score=115.47 Aligned_cols=177 Identities=11% Similarity=-0.011 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccc--hHHHHHHHHHHHHH
Q 021653 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAG--RFWTITIASIIYQI 101 (309)
Q Consensus 24 ~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~G--R~~~i~i~~~l~~~ 101 (309)
.+.+.+..++.....+++..++|.|+.+++|++..+++...+.+.++..++.+++|+++||+.+ |++......+...+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~ 324 (434)
T PRK11663 245 IWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILL 324 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHH
Confidence 4444444555556666777889999988899999999999999999999999999999999522 23322222111111
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHH
Q 021653 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (309)
Q Consensus 102 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~ 181 (309)
+.+.+.... . .+.....+..+..|++..+.........+|.+|++ .|++..++.
T Consensus 325 ~~~~~~~~~---~-----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~ 378 (434)
T PRK11663 325 SVGSLWLMP---F-----------------ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKE------AAGAATGFV 378 (434)
T ss_pred HHHHHHHcc---c-----------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHh------hHHhHHHHH
Confidence 111111111 0 02222222233334333222233345668888766 799999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHh
Q 021653 182 YFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIG 226 (309)
Q Consensus 182 ~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~ 226 (309)
+...++|..++|.+.+++.+..||+..|++.+++.+++.+..++.
T Consensus 379 ~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 423 (434)
T PRK11663 379 GLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPF 423 (434)
T ss_pred HHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988888877766555443
No 120
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.41 E-value=1.3e-11 Score=119.94 Aligned_cols=149 Identities=11% Similarity=0.143 Sum_probs=113.8
Q ss_pred HHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 021653 43 TNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEG 122 (309)
Q Consensus 43 ~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 122 (309)
.....+..+++|-+ ....++.+.+.+...+..++.|.++|.+ |||+.++++.++.++|.++.+.+.
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA~------------ 129 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATAQ------------ 129 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcCC------------
Confidence 34556777888776 4566778889999999999999999995 999999999999999999999877
Q ss_pred ccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 021653 123 EQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN 202 (309)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~ 202 (309)
+...+.++..+.|+|.|... .....++|..|.+ .|.....+.....-+....++.+...+..+
T Consensus 130 ----------~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k------~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~ 192 (599)
T PF06609_consen 130 ----------NMNTFIAGMVLYGVGAGVQE-LAALAISELVPNK------WRGLGLAIASIPFIITTWISPLIAQLFAAH 192 (599)
T ss_pred ----------cHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccc------hhhhHhHHHHHHHHhhhcccHHHHHHhccC
Confidence 78889999999999987766 4456689999976 465554444433333333455555555556
Q ss_pred ccchhhhhHHHHHHHHHHHH
Q 021653 203 IGWGWGLGIPTFAMFLSIIA 222 (309)
Q Consensus 203 ~gw~~~f~i~~~~~~~~~~~ 222 (309)
.+|||.|++.++...++++.
T Consensus 193 ~~WRw~~~~~~i~~~i~~vl 212 (599)
T PF06609_consen 193 SGWRWIFYIFIIWSGIALVL 212 (599)
T ss_pred CCcchHHHHHHHHHHHHHHH
Confidence 68999999988877666544
No 121
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.40 E-value=1.4e-11 Score=113.81 Aligned_cols=157 Identities=14% Similarity=0.135 Sum_probs=112.7
Q ss_pred HHHHHhHHhcC--CCHHHHHHHHHH--H---HHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 021653 44 NMISYLTTQLH--MPLTKAANTLTN--F---GGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLR 116 (309)
Q Consensus 44 ~l~~yl~~~~~--~s~~~~~~~~~~--~---~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~ 116 (309)
.+..++.+++. .++.+.+.+.+. + .+...+++++.|+++||+ |||+++.++.++..++.+++.++...+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~- 91 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLLPSYATI- 91 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhCCChhhh-
Confidence 34455555543 334444443332 2 233346789999999996 99999999999999988888765511000
Q ss_pred CCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 021653 117 PPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVL 196 (309)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~ 196 (309)
.......++++|++.|+|.+...+..+.+++|.+|++ +|+...++.+.+..+|..+++.+.
T Consensus 92 -------------~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~G~~i~~~~~ 152 (394)
T TIGR00883 92 -------------GIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPG------KRGFYGSFQQVGAPVGLLLAALTV 152 (394)
T ss_pred -------------HHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcc------cchHHHHHHHHHHHHHHHHHHHHH
Confidence 0001246788999999999999999999999999987 799999999999999999988776
Q ss_pred HHhh--------ccccchhhhhHHHHHHHHHHH
Q 021653 197 VYIQ--------DNIGWGWGLGIPTFAMFLSII 221 (309)
Q Consensus 197 ~~i~--------~~~gw~~~f~i~~~~~~~~~~ 221 (309)
..+. +..+||+.|.+.+++.++..+
T Consensus 153 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 185 (394)
T TIGR00883 153 LLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLY 185 (394)
T ss_pred HHHHHhcCHHHhhccchHHHHHHHHHHHHHHHH
Confidence 5543 356899999887766555443
No 122
>PRK15075 citrate-proton symporter; Provisional
Probab=99.40 E-value=3.5e-11 Score=114.23 Aligned_cols=152 Identities=11% Similarity=0.027 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHH-HHH
Q 021653 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMI-CLT 107 (309)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~-~~~ 107 (309)
...++....++.+..++|.|+++.+|++..+++.......++..++.+++|+++||+ |||+.+.++..+..+... ...
T Consensus 245 ~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~ 323 (434)
T PRK15075 245 LMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPALS 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHH
Confidence 334445566777888899999988999999888888888888889999999999996 999988776544332211 111
Q ss_pred HHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHH-HHH
Q 021653 108 ISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF-VMG 186 (309)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~-~~~ 186 (309)
... . ........+..++.+++.|...+....+..|.+|++ .|++..++.+. +..
T Consensus 324 ~~~--~-----------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~------~rg~~~g~~~~~~~~ 378 (434)
T PRK15075 324 WLV--A-----------------APSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAE------VRTAGFSLAYSLATA 378 (434)
T ss_pred HHH--c-----------------CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCC------ccchheeHHHHHHHH
Confidence 111 0 002223334445556667766666778889999988 68888887544 444
Q ss_pred HHHHHHHHHHHHhhccccch
Q 021653 187 AAILVAVTVLVYIQDNIGWG 206 (309)
Q Consensus 187 iG~~l~~~~~~~i~~~~gw~ 206 (309)
+++.++|.+.+++.+..|+.
T Consensus 379 ~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 379 IFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHhhhHHHHHHHHHHhcCCc
Confidence 45778999999999888864
No 123
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.39 E-value=3e-11 Score=112.63 Aligned_cols=152 Identities=12% Similarity=-0.041 Sum_probs=111.6
Q ss_pred HHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchH----HHHHHHHHHHHHHHHHHHHHh
Q 021653 35 KLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRF----WTITIASIIYQIGMICLTISA 110 (309)
Q Consensus 35 ~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~----~~i~i~~~l~~~g~~~~~~~~ 110 (309)
.++.......++.|++ ++|.|..+.+.+.+.+.+...+++++.|.++||+ ||+ +.+.++..+. +........
T Consensus 17 ~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~--~~~~~~~~~ 92 (382)
T PRK11128 17 FFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLF--AVAFWFGAH 92 (382)
T ss_pred HHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHH--HHHHHHhcc
Confidence 3344445567788884 6899999999999999999999999999999996 984 3332222111 111111112
Q ss_pred hcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHH
Q 021653 111 ILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAIL 190 (309)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~ 190 (309)
+.+.+++.|.+.|++.+...+...++..+..+ +|+..++......++|..
T Consensus 93 ----------------------~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~~--------~~~~a~~~~~~~~~lg~~ 142 (382)
T PRK11128 93 ----------------------SFWLLFVAIGLFNLFFSPLVPLTDALANTWQK--------QIGLDYGKVRLWGSIAFV 142 (382)
T ss_pred ----------------------cHHHHHHHHHHHHHHHcccccHHHHHHHHHHh--------hccCCcchHHHHHHHHHH
Confidence 67788889999999988888887777776522 356666667777789999
Q ss_pred HHHHHHHHhhccccchhhhhHHHHHHHHHH
Q 021653 191 VAVTVLVYIQDNIGWGWGLGIPTFAMFLSI 220 (309)
Q Consensus 191 l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~ 220 (309)
++|.+++++.+.+||+..|++.++..++..
T Consensus 143 igp~lgg~l~~~~g~~~~f~~~~~~~~~~~ 172 (382)
T PRK11128 143 IGSALTGKLVSWFGEQAILWILTAGVASML 172 (382)
T ss_pred HHHHHHHHHHHHcChhHHHHHHHHHHHHHH
Confidence 999999999999999999987776544443
No 124
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.39 E-value=8.8e-11 Score=109.57 Aligned_cols=169 Identities=8% Similarity=-0.044 Sum_probs=139.4
Q ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHH
Q 021653 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (309)
Q Consensus 22 ~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~ 101 (309)
|..+..++..++.....+...++.+.|++ ++|.+....+.+.+...+...++.++.+.+.||+ |+|+.+.++.+...+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~-~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQ-AAGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHH
Confidence 44555556666666777777788899996 4899999999998888888888999999999996 999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHH
Q 021653 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (309)
Q Consensus 102 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~ 181 (309)
+.+++.+.. +.+.+++...+.|+..|...+....++.+. |++ .+++..+.+
T Consensus 283 ~~~~~~~~~----------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~------~~~~~q~~~ 333 (382)
T TIGR00902 283 RWAIIGAIE----------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGS------EIAKLQALY 333 (382)
T ss_pred HHHHHHhHh----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHh------hHHHHHHHH
Confidence 988887665 778888889999999999999999999987 765 578888887
Q ss_pred H-HHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHH
Q 021653 182 Y-FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (309)
Q Consensus 182 ~-~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~ 222 (309)
+ ....+|..+++.++|++.+..|+ ..|++.+++.++++++
T Consensus 334 ~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 334 NALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 6 46789999999999999999886 5677777766665543
No 125
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.38 E-value=8.4e-11 Score=110.42 Aligned_cols=176 Identities=13% Similarity=0.055 Sum_probs=126.5
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHH-HHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTIT-IASIIYQI 101 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~-i~~~l~~~ 101 (309)
..+...+..++....+++...++|.|++ ++|++..+.+.+.+...++..++.++.|+++||+ |||+.+. .+.+...+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~~ 300 (402)
T TIGR00897 223 NVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCGI 300 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHH
Confidence 3445555566677777888888998885 5899999998888888999999999999999996 9988764 23333333
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHH
Q 021653 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (309)
Q Consensus 102 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~ 181 (309)
+.+.+.... .. ...+.+..++..++.|++.+...+ ......|..|+ +|++..+++
T Consensus 301 ~~~~l~~~~---~~--------------~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~-------~~g~~~g~~ 355 (402)
T TIGR00897 301 FTLALYYIP---QH--------------FGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAPK-------HKGAAMSVL 355 (402)
T ss_pred HHHHHHHHH---Hc--------------cCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCcc-------hhHHHHHHH
Confidence 322222211 00 001344555666777877776544 34555665443 599999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHH
Q 021653 182 YFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (309)
Q Consensus 182 ~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~ 225 (309)
+...++|+.++|.+.+.+.+..||...+++.+++.+++.++.++
T Consensus 356 ~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 356 NLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888877776655443
No 126
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.38 E-value=7.2e-11 Score=113.13 Aligned_cols=185 Identities=15% Similarity=0.123 Sum_probs=148.9
Q ss_pred ccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchH--HHHHHHHHH
Q 021653 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRF--WTITIASII 98 (309)
Q Consensus 21 ~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~--~~i~i~~~l 98 (309)
.|.....++..++-+-+...+......|.++++|++..+...+..+..+.+.++++++|++.||+ |.| ++++++.++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~~ 358 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLIL 358 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHH
Confidence 45666666677777777777888889999999999999999999999999999999999999996 999 888887776
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHH
Q 021653 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (309)
Q Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~ 178 (309)
+.+..+.-.+.. .+... .-.+.+.|++.-++.|+..|+.++..-++.+|..|++ +.+.+|
T Consensus 359 ~~~i~~~g~~G~-~~~~~-------------g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g------~e~efF 418 (477)
T PF11700_consen 359 WIIIPLYGLFGF-WPSFF-------------GLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPG------REAEFF 418 (477)
T ss_pred HHHHHHHHHHHh-hhccc-------------CcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCc------hhhHHH
Confidence 644333322211 11100 0126677888888999999999999999999999997 789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccc-chhhhhHHHHHHHHHHHHHHHh
Q 021653 179 NWYYFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAFLIG 226 (309)
Q Consensus 179 ~~~~~~~~iG~~l~~~~~~~i~~~~g-w~~~f~i~~~~~~~~~~~~~~~ 226 (309)
+.|.+..-..+.+||.+.+.+.+..| -|.++....++.++++++++..
T Consensus 419 gly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 419 GLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999988876 7888888888888887666443
No 127
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.36 E-value=1.7e-10 Score=111.38 Aligned_cols=172 Identities=12% Similarity=0.038 Sum_probs=121.9
Q ss_pred HHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHH-HHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH
Q 021653 31 EVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLT-NFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTIS 109 (309)
Q Consensus 31 ~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~-~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~ 109 (309)
.++.....+....+.++|+.+++|++..+.+.+.. ...++..++.+++|+++||+ |||+.+.++.++..++.+.....
T Consensus 231 ~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~~l~~~~l 309 (491)
T PRK11010 231 IVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVSNAGYWLL 309 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555667788888889999999998874 55678899999999999996 99998877666555544333221
Q ss_pred hhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHH
Q 021653 110 AILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAI 189 (309)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~ 189 (309)
... ..+...+.+..++..+..|...+...++..+..+++ ..++.++.++...++|.
T Consensus 310 ~~~------------------~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~------~~~t~~gl~~s~~~lg~ 365 (491)
T PRK11010 310 SIT------------------DKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKS------FSATQFALLSALSAVGR 365 (491)
T ss_pred Hhc------------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC------CcHHHHHHHHHHHHHHH
Confidence 100 013333344445544444544455667777888876 56777888888889999
Q ss_pred HHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHhC
Q 021653 190 LVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGY 227 (309)
Q Consensus 190 ~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~ 227 (309)
.+++.+.|++.+..||+..|.+.+++.+.++++....+
T Consensus 366 ~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 366 VYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999988888887766655443
No 128
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.35 E-value=6.8e-11 Score=111.95 Aligned_cols=163 Identities=15% Similarity=0.034 Sum_probs=114.7
Q ss_pred HHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCc
Q 021653 44 NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGE 123 (309)
Q Consensus 44 ~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 123 (309)
+...++.+++|++..+++.......++..++.+++|+++||+ |||+.+.++.++..++.+++........ ..
T Consensus 305 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------ 376 (481)
T TIGR00879 305 YYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLGILGASFV-TG------ 376 (481)
T ss_pred HHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHhhccc-CC------
Confidence 334455567899998888888888889999999999999996 9999999988877777766653221000 00
Q ss_pred cccccccchhHHHHHHHHHHHHHhhh-cchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 021653 124 QVCQEANKGQVAILYVSLLLAALGSG-GIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN 202 (309)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~gig~g-~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~ 202 (309)
.+............+.+.+.+ +..+....+.+|.+|++ .|++..+..+...++|+.+++.+.+++.+.
T Consensus 377 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~------~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~ 445 (481)
T TIGR00879 377 -----SSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLS------LRPKGISIAVAANWLANFIVGFLFPTMLES 445 (481)
T ss_pred -----cccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 000012222222222222222 23355666779999987 699999999999999999999999999888
Q ss_pred ccchhhhhHHHHHHHHHHHHHHH
Q 021653 203 IGWGWGLGIPTFAMFLSIIAFLI 225 (309)
Q Consensus 203 ~gw~~~f~i~~~~~~~~~~~~~~ 225 (309)
.+|++.|++.+++.+++.++...
T Consensus 446 ~~~~~~f~~~~~~~~~~~i~~~~ 468 (481)
T TIGR00879 446 IGVGGVFIFFGGLNVLGLIFVYF 468 (481)
T ss_pred cCccceehhHHHHHHHHHHHHhe
Confidence 89999998888777666655443
No 129
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.35 E-value=3.7e-11 Score=115.51 Aligned_cols=173 Identities=8% Similarity=0.031 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHH-----HHHHHHHHH
Q 021653 25 PFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFW-----TITIASIIY 99 (309)
Q Consensus 25 ~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~-----~i~i~~~l~ 99 (309)
+.+.+..++.....+.+..+++.|+.+++|++..+++.+.+...++..++.+++|+++||+ |||+ .........
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~~~ 333 (476)
T PLN00028 255 WILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIVQT 333 (476)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHHHH
Confidence 3333333334444455667789999888999999999999999999999999999999996 8762 222111111
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHH
Q 021653 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (309)
Q Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~ 179 (309)
+.+..+..+.. ..+.....+..++.+++.+...+...++..+..|+ .++...+
T Consensus 334 l~~i~~~~~~~--------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~g 386 (476)
T PLN00028 334 LGGVFCIWLGR--------------------ANSLGAAIVVMILFSIFVQAACGATFGIVPFVSRR-------SLGVISG 386 (476)
T ss_pred HHHHHHHHhcc--------------------cchHHHHHHHHHHHHHHHHHhhhhhcccCcccChh-------hchhhhh
Confidence 12211121111 01333344445555666555555555555565443 5888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHh
Q 021653 180 WYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIG 226 (309)
Q Consensus 180 ~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~ 226 (309)
+.+...++|+.+++.+.+ ..+..+|+.+|.+.+++.+++.++.+..
T Consensus 387 ~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 387 LTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred hhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 887777888887776643 2334579999998888777776665544
No 130
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.35 E-value=1.3e-10 Score=111.10 Aligned_cols=194 Identities=13% Similarity=0.083 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHh---ccchHHHHHHH-HHHHH
Q 021653 25 PFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADA---YAGRFWTITIA-SIIYQ 100 (309)
Q Consensus 25 ~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~---~~GR~~~i~i~-~~l~~ 100 (309)
+.+....+..++.+-....+++.|+ +++|.+....+.+..+..+...+.+++.|+++|| .+|||+.++++ .+...
T Consensus 7 i~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~ 85 (477)
T TIGR01301 7 LRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVA 85 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHH
Confidence 3344445555666655566666665 6899999999999999999999999999999995 24999998875 55555
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHH
Q 021653 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (309)
Q Consensus 101 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 180 (309)
++.+++..+.....+... ...+.........+.++..+..++.....++..++++|..|++++ +++...++
T Consensus 86 ~~l~ll~~~~~~~~~~~~-----~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~----~~~~a~~~ 156 (477)
T TIGR01301 86 FAVILIGFAADIGHLFGD-----NLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDAR----RTRIANAY 156 (477)
T ss_pred HHHHHHHhCchhhhhccc-----cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhH----HHHHHHHH
Confidence 555665554311100000 000000011123445556666778888888899999999998741 23678889
Q ss_pred HHHHHHHHHHHHHHHHHHh--hccc-------------cchhhhhHHHHHHHHHHHHHHHhCc
Q 021653 181 YYFVMGAAILVAVTVLVYI--QDNI-------------GWGWGLGIPTFAMFLSIIAFLIGYP 228 (309)
Q Consensus 181 ~~~~~~iG~~l~~~~~~~i--~~~~-------------gw~~~f~i~~~~~~~~~~~~~~~~~ 228 (309)
.....++|+.+++.++++. .+.. +.+..|.+.+++.++..++.....+
T Consensus 157 ~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~ 219 (477)
T TIGR01301 157 FSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVK 219 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeee
Confidence 9999999999999887764 1111 4567888877777666655444333
No 131
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.34 E-value=2e-10 Score=108.92 Aligned_cols=167 Identities=14% Similarity=-0.038 Sum_probs=106.9
Q ss_pred HHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH-Hh
Q 021653 32 VCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTI-SA 110 (309)
Q Consensus 32 ~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~-~~ 110 (309)
++....+|++..++|.|+.+++|++..+.+...+....+..++.++.|+++||+ |||+.+.++.++..+..+.... ..
T Consensus 253 ~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~~ 331 (432)
T PRK10406 253 AAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALFTVPILSALQ 331 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHH
Confidence 334667888889999999989999998888888887777888888999999996 9999887766544333221211 11
Q ss_pred hcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHH-HH
Q 021653 111 ILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGA-AI 189 (309)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~i-G~ 189 (309)
. ..+....+....+..++.+...+....+.+|.+|++ .|++..++.+...++ ++
T Consensus 332 ~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~------~r~t~~g~~~~~g~~~~g 386 (432)
T PRK10406 332 N-------------------VSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQ------VRALGVGLSYAVANALFG 386 (432)
T ss_pred c-------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC------ccchhhhHHHHHHHHHHH
Confidence 0 001121111122222333344456677889999988 699999987765443 34
Q ss_pred HHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHH
Q 021653 190 LVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFL 224 (309)
Q Consensus 190 ~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~ 224 (309)
..+|.+.+.+.....|...+++.++..+++.+..+
T Consensus 387 ~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~ 421 (432)
T PRK10406 387 GSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSL 421 (432)
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHH
Confidence 45777777665432355555555555555544433
No 132
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.30 E-value=2.6e-10 Score=103.63 Aligned_cols=162 Identities=11% Similarity=0.072 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHh--cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQ--LHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~--~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~ 100 (309)
..++..+..++....-.++..+++.|+.+. +|+++.+++...+.+.++..++.+++++++||+ |+++.+.++..+.+
T Consensus 141 ~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l~~ 219 (310)
T TIGR01272 141 HLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFLAV 219 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHH
Confidence 344333333333334456677899999854 799999999999999999999999999999996 99999988887777
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHH
Q 021653 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (309)
Q Consensus 101 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 180 (309)
++.++..... .... ..+..+.|++.+...|...+...+.+|++. .+++ +.
T Consensus 220 ~~~~l~~~~~----------------------~~~~-~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~-----~~as--ai 269 (310)
T TIGR01272 220 LLSIGAALTH----------------------GYVA-MWFVLALGLFNSIMFPTIFSLALNALGRHT-----SQGS--GI 269 (310)
T ss_pred HHHHHHHHcC----------------------CHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-----hhhH--HH
Confidence 7664444322 1111 235567899999999999988888888652 2333 33
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHH
Q 021653 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAM 216 (309)
Q Consensus 181 ~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~ 216 (309)
. ....+|+.+.|.+.|.+.|..|.+.+|+++.++.
T Consensus 270 ~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~~ 304 (310)
T TIGR01272 270 L-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPCY 304 (310)
T ss_pred H-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 3 4567899999999999999889888887665543
No 133
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.29 E-value=1.4e-10 Score=109.47 Aligned_cols=164 Identities=8% Similarity=-0.035 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHH-hcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHH-HHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTT-QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWT-ITIASIIYQ 100 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~-~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~-i~i~~~l~~ 100 (309)
..+......++....++++..++|.|+++ ..+.+..+++.......++..++.+++|+++||+ |||+. +.+..++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~~ 321 (412)
T TIGR02332 243 AIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFAA 321 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHHH
Confidence 34455566667777788899999999976 3477888888888999999999999999999996 87764 344333333
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHH
Q 021653 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (309)
Q Consensus 101 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 180 (309)
++.++..... +....+.+..+.++|.....+.......|.+|++ +|+...++
T Consensus 322 ~~~~~~~~~~----------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~~~~a~g~ 373 (412)
T TIGR02332 322 AGWLLASATD----------------------HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQ------ARAIAIAV 373 (412)
T ss_pred HHHHHHHhcC----------------------CHHHHHHHHHHHHHHhhhhhhHHHhhcccccchH------HHHHHHHH
Confidence 3322221111 1111222222333343333333444446677766 79999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccc-chhhhhHHHHH
Q 021653 181 YYFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFA 215 (309)
Q Consensus 181 ~~~~~~iG~~l~~~~~~~i~~~~g-w~~~f~i~~~~ 215 (309)
.+...++|+.++|.+.+.+.+..| |+.+|++.+++
T Consensus 374 ~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 374 INATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 999999999999999999988775 99888876654
No 134
>PRK10504 putative transporter; Provisional
Probab=99.29 E-value=3.5e-10 Score=108.21 Aligned_cols=156 Identities=10% Similarity=0.039 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Q 021653 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (309)
Q Consensus 24 ~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~ 103 (309)
....+...++..+.+.......+.|++..+|.++.+++.......++..++.++.|+++||+ |||+++.++..+..++.
T Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~ 341 (471)
T PRK10504 263 FSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLALVS 341 (471)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHH
Confidence 34444555555555544455677788878999999999888888888888889999999996 99999998888777766
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHH
Q 021653 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (309)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~ 183 (309)
.++.... .......+.+..++.|+|.+...+....+..+..|++ .++..+++++.
T Consensus 342 ~~~~~~~-------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~ 396 (471)
T PRK10504 342 LLFMLVA-------------------LLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDN------LASSGNSLLSM 396 (471)
T ss_pred HHHHhcc-------------------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH------hccchHHHHHH
Confidence 6555432 0113333445566778888888888888888888876 68999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccc
Q 021653 184 VMGAAILVAVTVLVYIQDNIGW 205 (309)
Q Consensus 184 ~~~iG~~l~~~~~~~i~~~~gw 205 (309)
...+|..+|+.+.+.+.+..|+
T Consensus 397 ~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 397 IMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999988877655444
No 135
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.28 E-value=2.8e-10 Score=104.13 Aligned_cols=154 Identities=13% Similarity=0.102 Sum_probs=122.5
Q ss_pred HHHHHHHHHHHHHHHHHhhH-HHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFN-TNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~-~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~ 101 (309)
..+......++..+..++.. ..+|.|.++.+|.+..+.+.+.....++..++.++.|++.||+ ||++.+..+..+..+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 289 (365)
T TIGR00900 211 LLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIGL 289 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHH
Confidence 34444444555555555555 5677777777999999999999999999999999999999996 999998888766666
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHH
Q 021653 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (309)
Q Consensus 102 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~ 181 (309)
+..+..... + +.+.+++..++.|++.+...+....+..|.+|++ .|++..+.+
T Consensus 290 ~~~~~~~~~--------------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~ 342 (365)
T TIGR00900 290 AILVVGLTP--------------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAE------LLGRVFGAQ 342 (365)
T ss_pred HHHHHHhhc--------------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH------HHHHHHHHH
Confidence 655555433 1 2566777888899999999999999999999976 799999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccc
Q 021653 182 YFVMGAAILVAVTVLVYIQDNIG 204 (309)
Q Consensus 182 ~~~~~iG~~l~~~~~~~i~~~~g 204 (309)
+...++|..+++.+.+++.+..|
T Consensus 343 ~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 343 FSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999887643
No 136
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.28 E-value=1.1e-10 Score=107.31 Aligned_cols=187 Identities=13% Similarity=0.054 Sum_probs=137.8
Q ss_pred ccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHH
Q 021653 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (309)
Q Consensus 21 ~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~ 100 (309)
-+..|.+.+..+...-++-++..+++.|++++|+.++.+++.+...+.....+..+++|++|||+ |.+|++.+.....+
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~ 295 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMA 295 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHH
Confidence 34567777777777777888899999999999999999999999999999999999999999997 99888888877777
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHH
Q 021653 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (309)
Q Consensus 101 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 180 (309)
++...+.... +.. ..+.+...+++..+.+++..|.-...+..++...+|+ +-|...++
T Consensus 296 ~~~~~l~~~~--~~~-------------~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-------~~G~v~G~ 353 (417)
T COG2223 296 LAAALLSLFL--TGF-------------GHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-------ETGAVTGI 353 (417)
T ss_pred HHHHHHHccc--ccc-------------ccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-------hhhHHHHH
Confidence 7766666433 000 0011333444434444444444444455555566665 47778888
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccc-chhhhhHHHHHHHHHHHHHHHhCcce
Q 021653 181 YYFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAFLIGYPLY 230 (309)
Q Consensus 181 ~~~~~~iG~~l~~~~~~~i~~~~g-w~~~f~i~~~~~~~~~~~~~~~~~~~ 230 (309)
.....++|++.-|...+...+..| +..+|++.....+++.++.+....|.
T Consensus 354 vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 354 VGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred HHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 888889999888888888888777 88899988888887777665554443
No 137
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.27 E-value=2.2e-10 Score=108.87 Aligned_cols=175 Identities=13% Similarity=0.104 Sum_probs=116.1
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHH-
Q 021653 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG- 102 (309)
Q Consensus 24 ~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g- 102 (309)
.+.+.+..++.....+++..++|.|+++..|++..+++.....+.+...++.+++|+++||+ |+++....+..+..+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~~ 331 (438)
T TIGR00712 253 LWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTLVT 331 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHHHH
Confidence 44444555555666678888999999988999999999988889999999999999999996 7543223333222221
Q ss_pred --HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHH
Q 021653 103 --MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (309)
Q Consensus 103 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 180 (309)
.+.+.... ..+........+..|++..+..........|.+|++ .|++..++
T Consensus 332 ~~~~~~~~~~--------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~ 385 (438)
T TIGR00712 332 IAVIVYWMNP--------------------AGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKK------AAGTAAGF 385 (438)
T ss_pred HHHHHHHhcC--------------------CCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChh------heeeehhh
Confidence 11111110 002222333334444443332222234567888876 69999999
Q ss_pred HHHHHHHHH-HHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHH
Q 021653 181 YYFVMGAAI-LVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (309)
Q Consensus 181 ~~~~~~iG~-~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~ 225 (309)
++...++|+ .++|.+.+.+.+..||..+|++.+++.+++.+..+.
T Consensus 386 ~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 431 (438)
T TIGR00712 386 TGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV 431 (438)
T ss_pred hchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 988878775 689999999999889999988877766666555443
No 138
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.27 E-value=1.6e-09 Score=101.67 Aligned_cols=168 Identities=10% Similarity=-0.112 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Q 021653 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (309)
Q Consensus 24 ~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~ 103 (309)
.+.......+.....+......|.|+.+++|+++.+.+.......++..++.++.|+++||+ |||+.+.++.++..+|.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g~ 295 (406)
T PRK15402 217 FVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAGL 295 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 34333444444444455556678888888999999888877777778888999999999996 99999999988888887
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHH
Q 021653 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (309)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~ 183 (309)
++....... .+.+...++++.++.|+|.+...+..........| + ++++..+.+++
T Consensus 296 ~~~~~~~~~-----------------~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~-~------~~g~~~~~~~~ 351 (406)
T PRK15402 296 LLAALATVI-----------------SSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFSSD-V------SKGTVSAAMGM 351 (406)
T ss_pred HHHHHHHHc-----------------ccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhhcc-c------cccHHHHHHHH
Confidence 777654311 01145556777888899988877666555444333 3 68999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccchhhhhHHHHHH
Q 021653 184 VMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAM 216 (309)
Q Consensus 184 ~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~ 216 (309)
...+|..+|+.+.+++-+..++....+...+..
T Consensus 352 ~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 384 (406)
T PRK15402 352 LSMLIFTVGIELSKHAYLGGGNGLFNLFNLANG 384 (406)
T ss_pred HHHHHHHHHHHHHHhcccCCchHHHHHHHHHHH
Confidence 999999999999999887777665444444333
No 139
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.26 E-value=6.2e-10 Score=105.25 Aligned_cols=161 Identities=17% Similarity=0.111 Sum_probs=117.9
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g 102 (309)
..+.+++..++.....+......+.|.+..++ +....+.+.....+...++.++.++++||+ |||+++.++.++..++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~~ 300 (437)
T TIGR00792 223 QLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVLG 300 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 44445555555556555544444555554555 455666677777888889999999999996 9999999998888887
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChh-hhhhhhHHHHHH
Q 021653 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPK-QATKTWKYFNWY 181 (309)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~-~~~~r~~~~~~~ 181 (309)
.+++.+.. .+...+++..++.+++.+...+...++.+|..|.++-+ .++++|..++.+
T Consensus 301 ~~~~~~~~---------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 359 (437)
T TIGR00792 301 YLIFFFAG---------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVR 359 (437)
T ss_pred HHHHHHcc---------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHH
Confidence 76665432 14455666677889999998999999999988743211 122579999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccch
Q 021653 182 YFVMGAAILVAVTVLVYIQDNIGWG 206 (309)
Q Consensus 182 ~~~~~iG~~l~~~~~~~i~~~~gw~ 206 (309)
++...+|..+++.+.+++.+..||.
T Consensus 360 ~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 360 TFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999888776663
No 140
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.26 E-value=1.1e-09 Score=102.02 Aligned_cols=166 Identities=8% Similarity=-0.020 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g 102 (309)
..+.++...++...........++.|++ +.|++..+.+.+.+....+..+..++.|++.||+ |+++.+.++.++..++
T Consensus 206 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~~ 283 (382)
T PRK11128 206 TVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVVR 283 (382)
T ss_pred hHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHH
Confidence 3444444455555555556677888885 5899999999888888888888889999999996 9999999988888777
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHH
Q 021653 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (309)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~ 182 (309)
.++..... +.+.+++..++.|++.+...+....+..++ +++ ++++..+.+.
T Consensus 284 ~~~~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~ 334 (382)
T PRK11128 284 WGLMGSTT----------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGS------EVIRLQALYS 334 (382)
T ss_pred HHHHHhhh----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHh------hhHHHHHHHH
Confidence 76665544 677778888889999988888888887776 333 4577777765
Q ss_pred -HHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHH
Q 021653 183 -FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSI 220 (309)
Q Consensus 183 -~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~ 220 (309)
....+|..+++.+.|++.+.+|+ ..|+..+++.++++
T Consensus 335 ~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 335 ALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 45677888999999999998887 35555555544443
No 141
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.25 E-value=2.8e-10 Score=110.20 Aligned_cols=168 Identities=14% Similarity=0.128 Sum_probs=138.2
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Q 021653 27 IFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICL 106 (309)
Q Consensus 27 i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~ 106 (309)
++...++.++....+...+|.+..+.+|.+....|.+.+.+.++..+++++.+.+.+++ ++++.+..+.+++.++.+.+
T Consensus 223 ~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~~~~l 301 (524)
T PF05977_consen 223 VLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALALLLL 301 (524)
T ss_pred HHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHHHHHH
Confidence 33333444444444556678888899999999999999999999999999999999995 99999888888888877777
Q ss_pred HHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHH
Q 021653 107 TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 186 (309)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~ 186 (309)
.++. +.+...+..++.|++.....+......-+..|++ .||+.++.++....
T Consensus 302 al~~----------------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~------~~GRv~si~~~~~~ 353 (524)
T PF05977_consen 302 ALSP----------------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDW------VRGRVFSIYQMVFF 353 (524)
T ss_pred hcch----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH------HHhHHHHHHHHHHH
Confidence 7665 6677777888889988888888888888888887 79999999999999
Q ss_pred HHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHH
Q 021653 187 AAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAF 223 (309)
Q Consensus 187 iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~ 223 (309)
.+..+|.++.|.+.+..|-+..+.+.++..+++.++.
T Consensus 354 g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 354 GGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888888777665555443
No 142
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.25 E-value=3.4e-10 Score=99.00 Aligned_cols=168 Identities=14% Similarity=0.043 Sum_probs=131.8
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHH-H
Q 021653 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIA-S 96 (309)
Q Consensus 18 ~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~-~ 96 (309)
+...+..|.+..+.++-..+.+-+.+.-+.++++.+|+|+.+++.+.+...+...+.+++.|.++|++ ||+-..+.+ +
T Consensus 260 ~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv~~a~ 338 (459)
T KOG4686|consen 260 NTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWVASAC 338 (459)
T ss_pred cccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhHHHHH
Confidence 44567788888888888888877777788999999999999999999999999999999999999998 998665554 4
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhH
Q 021653 97 IIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWK 176 (309)
Q Consensus 97 ~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~ 176 (309)
+...++-.+++++. ..-+.+..+.|+..........+.++-..|++ +.|+
T Consensus 339 ~~tl~~H~~l~Ft~------------------------lsPy~~m~~lGLsysllAcslWP~va~~vpE~------qLGT 388 (459)
T KOG4686|consen 339 ILTLLGHSGLFFTF------------------------LSPYTSMTFLGLSYSLLACSLWPCVASLVPEE------QLGT 388 (459)
T ss_pred HHHHHHhhhHHhhh------------------------ccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHH------Hhcc
Confidence 45555666666654 22356667778777776666777778888887 8999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccc---chhhhhHHHHHH
Q 021653 177 YFNWYYFVMGAAILVAVTVLVYIQDNIG---WGWGLGIPTFAM 216 (309)
Q Consensus 177 ~~~~~~~~~~iG~~l~~~~~~~i~~~~g---w~~~f~i~~~~~ 216 (309)
.++..+...|+|-.+.|++++.+.+.-| |--.|.+....+
T Consensus 389 aygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~ 431 (459)
T KOG4686|consen 389 AYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLM 431 (459)
T ss_pred hHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHH
Confidence 9999999999999999999999987654 444454444433
No 143
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.25 E-value=1.4e-09 Score=105.44 Aligned_cols=178 Identities=14% Similarity=0.074 Sum_probs=137.5
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Q 021653 25 PFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMI 104 (309)
Q Consensus 25 ~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~ 104 (309)
..++...++.+++......-++-+++ ++.-|+...+.+.....+-..+.++++|.++||+ .||+.++.+-++..+..+
T Consensus 13 r~lw~a~~iS~lG~~~~~va~~wlv~-~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~~~~ 90 (524)
T PF05977_consen 13 RRLWIAQLISNLGDWMQTVALAWLVT-QLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRALVAL 90 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHHH
Confidence 33345555555554433333444443 5567888888888888999999999999999996 999999999988877666
Q ss_pred HHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHH
Q 021653 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 184 (309)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~ 184 (309)
.+++.... ...+.+.+++..++.|++.+...|...+++.|..|++ +...+.++....
T Consensus 91 ~L~~l~~~-----------------~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~------~L~~A~al~s~~ 147 (524)
T PF05977_consen 91 LLAVLAFF-----------------GLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKE------DLPAANALNSIS 147 (524)
T ss_pred HHHHHHHh-----------------CcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHh------hHHHHHHHHHHH
Confidence 65544311 1226788888889999999999999999999999987 688888999999
Q ss_pred HHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHhC
Q 021653 185 MGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGY 227 (309)
Q Consensus 185 ~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~ 227 (309)
.|+...+||.++|.+....|-.+.|.+-++..++.++.+...+
T Consensus 148 ~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~ 190 (524)
T PF05977_consen 148 FNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWK 190 (524)
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999999998888888889888877766555444433
No 144
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.23 E-value=3.7e-10 Score=108.14 Aligned_cols=156 Identities=13% Similarity=0.084 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g 102 (309)
..+......++..+.+++....+|.|+++.+|+++.+++.......++..++.+++|++.||+ |||+.+.++..+..++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~~ 334 (485)
T TIGR00711 256 NFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAVG 334 (485)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHHH
Confidence 344445555666677777788899999999999999999999999999999999999999996 9999999988888777
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHH
Q 021653 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (309)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~ 182 (309)
..++.... . ...+...+....++.|+|.|...++......+..|++ .++...+.++
T Consensus 335 ~~~~~~~~-~-----------------~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~ 390 (485)
T TIGR00711 335 FYWRAFTF-T-----------------PDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPH------KIARGSSLSN 390 (485)
T ss_pred HHHHhccC-C-----------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH------HHhHHHHHHH
Confidence 77665321 0 1114455666678889999988877777777888866 7999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccc
Q 021653 183 FVMGAAILVAVTVLVYIQDNI 203 (309)
Q Consensus 183 ~~~~iG~~l~~~~~~~i~~~~ 203 (309)
...++|+.+++.+.+.+.++.
T Consensus 391 ~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 391 FTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999888776543
No 145
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.23 E-value=2.5e-10 Score=109.32 Aligned_cols=147 Identities=13% Similarity=0.104 Sum_probs=120.8
Q ss_pred HHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccc
Q 021653 50 TTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEA 129 (309)
Q Consensus 50 ~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (309)
.++.|+...+-+.+.+++.+++.++.+++|.+.||+ .-.+.+....++..+-.++.....
T Consensus 73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~~------------------- 132 (495)
T KOG2533|consen 73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAVH------------------- 132 (495)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHh-------------------
Confidence 367788888999999999999999999999999996 866666665555544443444333
Q ss_pred cchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh------ccc
Q 021653 130 NKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQ------DNI 203 (309)
Q Consensus 130 ~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~------~~~ 203 (309)
+.+.+++.|+++|+..++.+|+...+++.+|.++ +|+.-+++++.+.++|+++|.++...+. ...
T Consensus 133 ---s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~------e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~ 203 (495)
T KOG2533|consen 133 ---SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKS------ERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLA 203 (495)
T ss_pred ---hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChh------hhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcC
Confidence 7888999999999999999999999999999987 7999999999999999999988877653 356
Q ss_pred cchhhhhHHHHHHHHHHHHHHH
Q 021653 204 GWGWGLGIPTFAMFLSIIAFLI 225 (309)
Q Consensus 204 gw~~~f~i~~~~~~~~~~~~~~ 225 (309)
|||+.|++.+++.++..++.++
T Consensus 204 gW~~~FiI~G~i~~~~gi~~f~ 225 (495)
T KOG2533|consen 204 GWRWLFIIEGVITLVLGIVVFF 225 (495)
T ss_pred CceeehhHHHHHHHHHHheEEE
Confidence 8999999999887765544433
No 146
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.23 E-value=1.7e-09 Score=99.94 Aligned_cols=178 Identities=13% Similarity=0.105 Sum_probs=138.4
Q ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHH
Q 021653 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (309)
Q Consensus 22 ~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~ 101 (309)
+..+..+...++...+.|...+++-+|+++..|+|....+++...+.++..++.+++|.++|| +.++++.....+..+
T Consensus 211 p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~ 288 (394)
T COG2814 211 PGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLAL 288 (394)
T ss_pred chHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHH
Confidence 456666677777777788888999999999999999999999999999999999999999999 788888888777777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHH
Q 021653 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (309)
Q Consensus 102 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~ 181 (309)
..+.+.+.. .+.....+..++.|++.+........-.++..|+ .+....+++
T Consensus 289 ~~l~l~~~~---------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~-------~~~~a~sl~ 340 (394)
T COG2814 289 ALLALTFTG---------------------ASPALALALLFLWGFAFSPALQGLQTRLARLAPD-------AADLAGSLN 340 (394)
T ss_pred HHHHHHHhc---------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCC-------chHHHHHHH
Confidence 777666544 1444445555555665555444444444453333 477788888
Q ss_pred HHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHhCcc
Q 021653 182 YFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPL 229 (309)
Q Consensus 182 ~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~ 229 (309)
....|+|..+|.++++.+.+++|+....++.+++.++++++.+...+.
T Consensus 341 ~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 341 VAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 889999999999999999999999999999999888887776655443
No 147
>TIGR00895 2A0115 benzoate transport.
Probab=99.23 E-value=6.4e-10 Score=102.96 Aligned_cols=147 Identities=14% Similarity=0.062 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g 102 (309)
..+.+....++....++....+++ ++.+++|++..+.+.+.+...++..++.+++|+++||+ |||+.+....+..+.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~ 328 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLGAVFA 328 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHHH
Confidence 334444445556666666677777 66678999999999999999999999999999999996 9995554444333333
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHH
Q 021653 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (309)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~ 182 (309)
.++..... +...+++..++.|++.++..+....+.+|.+|++ .|++..++++
T Consensus 329 ~~~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~~ 380 (398)
T TIGR00895 329 VLVGSTLF----------------------SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTA------IRATGVGWAI 380 (398)
T ss_pred HHHHHHhh----------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHH------HHHHHHHHHH
Confidence 22222122 4455667778889999999999999999999977 7999999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 021653 183 FVMGAAILVAVTVLVYI 199 (309)
Q Consensus 183 ~~~~iG~~l~~~~~~~i 199 (309)
....+|..++|.+.+++
T Consensus 381 ~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 381 GIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHhHHhc
Confidence 99999999999998865
No 148
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.23 E-value=1.1e-09 Score=105.05 Aligned_cols=168 Identities=13% Similarity=0.104 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccc-----hHHHHHHHHHHH
Q 021653 25 PFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAG-----RFWTITIASIIY 99 (309)
Q Consensus 25 ~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~G-----R~~~i~i~~~l~ 99 (309)
..+....+.+... +.+...++.++.+++|+++++.+...+...+...+-++ .|+++|++ + ||+.++++.++.
T Consensus 29 ~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~~~~l~ 105 (468)
T TIGR00788 29 AIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVLSGLLG 105 (468)
T ss_pred HHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHHHHHHH
Confidence 3344466667776 66777788899999999999999888888888888666 99999996 7 778777777665
Q ss_pred H-HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHH
Q 021653 100 Q-IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (309)
Q Consensus 100 ~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~ 178 (309)
. ++...+.... .......+.+++.+++.+......-++..|..+ +++ +.++...
T Consensus 106 ~~~~~~~l~~~~---------------------~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~---~~~~~~~ 160 (468)
T TIGR00788 106 SAILYGLLPGKV---------------------SSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESP---SAGPSLV 160 (468)
T ss_pred HHHHHHhccccc---------------------chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCC---CcCCCee
Confidence 2 2222221111 122333346788899999999999999999998 421 2445566
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHH
Q 021653 179 NWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSI 220 (309)
Q Consensus 179 ~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~ 220 (309)
++.+.+.++|..+++.+++++.+..+|+..|++.+++.++..
T Consensus 161 s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~ 202 (468)
T TIGR00788 161 SWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQL 202 (468)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHH
Confidence 677777889999999999999999999999998887776654
No 149
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.23 E-value=1.7e-10 Score=104.60 Aligned_cols=116 Identities=14% Similarity=0.127 Sum_probs=103.2
Q ss_pred CHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHH
Q 021653 56 PLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVA 135 (309)
Q Consensus 56 s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (309)
+..-++.+-+.+.++.++.++..|.+||+| |||++++++++...+...+.+.+. +..
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S~----------------------~F~ 122 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALSR----------------------NFA 122 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHHH----------------------HHH
Confidence 334578888999999999999999999998 999999999999999888888877 777
Q ss_pred HHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 021653 136 ILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD 201 (309)
Q Consensus 136 ~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~ 201 (309)
.|.++|++.|+.-|-. ++..++++|.++++ .|+..++....+..+|..+||.+++++..
T Consensus 123 afv~aR~l~Gi~kgnl-~v~rAiisdV~sek------~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 123 AFVLARFLGGIFKGNL-SVIRAIISDVVSEK------YRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHhhhhccCch-HHHHHHHHhhcChh------hccceeeeeehhhhcchhhcchhhhHHHh
Confidence 7788899999988765 46788999999987 69999999999999999999999999877
No 150
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.22 E-value=5.3e-10 Score=102.74 Aligned_cols=161 Identities=13% Similarity=0.112 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHH--HHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI--IYQ 100 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~--l~~ 100 (309)
..+.+.+..++.....+++..+++.|+.+.+|++..+++...+...++..++.++.|+++||..+||+....... ...
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~ 296 (379)
T TIGR00881 217 VLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALII 296 (379)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHH
Confidence 445555556666666677788899999999999999999999999999999999999999985344433222111 111
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHH
Q 021653 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (309)
Q Consensus 101 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 180 (309)
++........ ..+...+.+..++.|+..++..+....+..|.+|++ .|++..++
T Consensus 297 ~~~~~~~~~~--------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~ 350 (379)
T TIGR00881 297 VSLLVYWLNP--------------------AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKK------AAGTAAGF 350 (379)
T ss_pred HHHHHHhcCc--------------------chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcc------hhHHHHHH
Confidence 1111111100 113334444455566655555566677889999987 79999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccchhhh
Q 021653 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGL 209 (309)
Q Consensus 181 ~~~~~~iG~~l~~~~~~~i~~~~gw~~~f 209 (309)
++...++|+.+++.+.+.+.+..||+..|
T Consensus 351 ~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 351 VGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 99999999999999999999999998754
No 151
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.22 E-value=8.6e-10 Score=105.47 Aligned_cols=178 Identities=16% Similarity=-0.003 Sum_probs=118.8
Q ss_pred ccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHH--------H
Q 021653 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWT--------I 92 (309)
Q Consensus 21 ~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~--------i 92 (309)
++..+.+.+..++..+.++.+..++|.|+.+.+|++..+.+...+...++..++.+++|+++||+ ++|+. +
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~ 338 (465)
T TIGR00894 260 SLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKI 338 (465)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHH
Confidence 34567777777888888888899999999999999999999999999999999999999999995 64421 1
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhh
Q 021653 93 TIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQAT 172 (309)
Q Consensus 93 ~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~ 172 (309)
..+......+..+..... .. .+.....+...+.+.+.++..+.......|..|.
T Consensus 339 ~~~~~~~~~~~~~~~~~~-~~------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------- 392 (465)
T TIGR00894 339 FNGIGGLGPGIFAYALPY-LS------------------AAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR------- 392 (465)
T ss_pred HHHHHHHHHHHHHHHHHH-cC------------------CchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-------
Confidence 111111111111111111 00 0223333334444444444444444444455543
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhccc---cchhhhhHHHHHHHHHHHHHHH
Q 021653 173 KTWKYFNWYYFVMGAAILVAVTVLVYIQDNI---GWGWGLGIPTFAMFLSIIAFLI 225 (309)
Q Consensus 173 ~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~---gw~~~f~i~~~~~~~~~~~~~~ 225 (309)
.+|...+..+...++|+.++|.+.+++.+.. +|+..|.+.++..+++.++...
T Consensus 393 ~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 393 FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 5899999999999999999999999887643 4788888887777766655443
No 152
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.22 E-value=2.6e-09 Score=102.26 Aligned_cols=153 Identities=13% Similarity=0.044 Sum_probs=107.4
Q ss_pred HhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccc
Q 021653 48 YLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQ 127 (309)
Q Consensus 48 yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (309)
++.++.|++............+...++.+++|+++||+ |||+.++.+.++..++.+++......+
T Consensus 296 ~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~~~-------------- 360 (479)
T PRK10077 296 EIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFYTQ-------------- 360 (479)
T ss_pred HHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHhcC--------------
Confidence 33457888877666666667777888999999999996 999999999998888887776443100
Q ss_pred cccchhHHHHHHHHHHHHHhhhcc-hhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHH------Hhh
Q 021653 128 EANKGQVAILYVSLLLAALGSGGI-RPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLV------YIQ 200 (309)
Q Consensus 128 ~~~~~~~~~~~~~~~l~gig~g~~-~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~------~i~ 200 (309)
........+.++.+.+.+.. .+....+.+|.+|++ .|+...++.+...++|..+++.+.+ ++.
T Consensus 361 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~------~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~ 430 (479)
T PRK10077 361 ----APGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNA------IRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLV 430 (479)
T ss_pred ----cccHHHHHHHHHHHHHHhccccchhHHHhHhhCChh------HHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchh
Confidence 01112233344444444432 366788999999977 7999999998888888888766554 344
Q ss_pred ccccchhhhhHHHHHHHHHHHHHHH
Q 021653 201 DNIGWGWGLGIPTFAMFLSIIAFLI 225 (309)
Q Consensus 201 ~~~gw~~~f~i~~~~~~~~~~~~~~ 225 (309)
+..+|+..|++.+++.+++.++.+.
T Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (479)
T PRK10077 431 AHFHNGFSYWIYGCMGVLAALFMWK 455 (479)
T ss_pred hhccCccHHHHHHHHHHHHHHHHHh
Confidence 5778888888877666655554433
No 153
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.22 E-value=1.4e-09 Score=102.53 Aligned_cols=142 Identities=15% Similarity=0.047 Sum_probs=103.5
Q ss_pred HhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 021653 39 VGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPP 118 (309)
Q Consensus 39 ~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~ 118 (309)
+.+..+++.|+++ .|++..+.+...+...++..++.+++|+++||+ |||+.+..+.++..++.+.+.... .
T Consensus 248 ~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~---~---- 318 (426)
T PRK12307 248 WPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRIP---Q---- 318 (426)
T ss_pred HHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHc---c----
Confidence 3456678888875 699998888888888889999999999999996 999999888877665544443222 0
Q ss_pred CCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 021653 119 PCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVY 198 (309)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~ 198 (309)
.....+.+..+..+.+..+..+..+.++.|.+|++ .|++..+..+...++|+.++|.+.++
T Consensus 319 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~------~~g~~~g~~~~~~~~~~~~gp~~~g~ 379 (426)
T PRK12307 319 -------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLE------VRGLGTGLIYNLAATSGTFNSMAATW 379 (426)
T ss_pred -------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHH------HHhhhhhHHHHHHhHHHHHHHHHHHH
Confidence 01111112122222233334456778889999987 79999999998999999999999999
Q ss_pred hhccccchhh
Q 021653 199 IQDNIGWGWG 208 (309)
Q Consensus 199 i~~~~gw~~~ 208 (309)
+.+..|+...
T Consensus 380 l~~~~g~~~~ 389 (426)
T PRK12307 380 LGITMGLGAA 389 (426)
T ss_pred HHHcccHHHH
Confidence 9988876543
No 154
>PRK09669 putative symporter YagG; Provisional
Probab=99.22 E-value=5e-10 Score=106.61 Aligned_cols=170 Identities=11% Similarity=0.127 Sum_probs=117.2
Q ss_pred HHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhc---cchHHH-HHHHHHHHHHHHHH
Q 021653 30 NEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY---AGRFWT-ITIASIIYQIGMIC 105 (309)
Q Consensus 30 ~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~---~GR~~~-i~i~~~l~~~g~~~ 105 (309)
..+..+..+..+..+++.|+++.+|++...++.+..+..+...+..++.|+++||. +||||. ++.+.+...+..++
T Consensus 17 g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l 96 (444)
T PRK09669 17 GDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLL 96 (444)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHH
Confidence 34555555666678899999999999999999999999999999999999999993 488554 54565655555544
Q ss_pred HHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHH
Q 021653 106 LTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM 185 (309)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~ 185 (309)
+... |... .......+++..++.+++..+...+..++.+|+.++.+ +|++..++.....
T Consensus 97 ~f~~---p~~~-------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~-----eR~~l~~~r~~~~ 155 (444)
T PRK09669 97 TFYT---PDFG-------------ATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPR-----ERHSLQSWRFALS 155 (444)
T ss_pred HHhC---CCCC-------------cchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHH-----HHHHHHHHHHHHH
Confidence 3322 2110 11234555555566677777777788889999875532 6888888888888
Q ss_pred HHHHHHHHHHHHHhhc-------cccchhhhhHHHHHHHHHH
Q 021653 186 GAAILVAVTVLVYIQD-------NIGWGWGLGIPTFAMFLSI 220 (309)
Q Consensus 186 ~iG~~l~~~~~~~i~~-------~~gw~~~f~i~~~~~~~~~ 220 (309)
++|+.+++.+...+.. ..+|+..+.+.+++..+..
T Consensus 156 ~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~ 197 (444)
T PRK09669 156 FIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLF 197 (444)
T ss_pred HHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH
Confidence 8888777654433222 2467766666666554443
No 155
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.22 E-value=2.7e-10 Score=109.94 Aligned_cols=174 Identities=16% Similarity=0.135 Sum_probs=142.0
Q ss_pred HHHHHHHHHHHHHHHhhHH---HHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHH
Q 021653 25 PFIFSNEVCEKLAVVGFNT---NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (309)
Q Consensus 25 ~~i~~~~~~~~~~~~~~~~---~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~ 101 (309)
|.+.+..++.+...+++.. .+-..++++++.+..+.+++.++......+..++.+.+.||+ |.|.++++|.++..+
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHH
Confidence 3344444455554444443 244556788999999999999999999999999999999996 999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHH-HHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHH
Q 021653 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSL-LLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (309)
Q Consensus 102 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 180 (309)
|.++..+++ +.+.+++.. ++.|+|.|..+.+....+...|++ +|+.+.+.
T Consensus 124 g~~lssF~~----------------------~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~k-------kR~lA~Gi 174 (509)
T KOG2504|consen 124 GLLLSSFAT----------------------SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEK-------KRALATGI 174 (509)
T ss_pred HHHHHHHHh----------------------hHHHHHHHHHHHhhccchhhhcchhhhhhhHhHH-------HHHHHHhh
Confidence 999999998 788888776 677999999998888888877775 58888888
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHhCc
Q 021653 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (309)
Q Consensus 181 ~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~~ 228 (309)
-..+..+|.++=|.+..++.+.+|||..+++.+.+.+-.++.....+|
T Consensus 175 a~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 175 AVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred hhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 777888888888888889999999999999988887665555555555
No 156
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.21 E-value=9.7e-10 Score=102.88 Aligned_cols=165 Identities=13% Similarity=0.096 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHhhHHHHHHHhHHhc---CCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Q 021653 29 SNEVCEKLAVVGFNTNMISYLTTQL---HMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMIC 105 (309)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~---~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~ 105 (309)
...++....+......++.|+.+.+ +.+....+.+.+...+...++.+..|++.||+ |||+.+.++.++..++..+
T Consensus 222 l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~~l~~~~ 300 (396)
T TIGR00882 222 LYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIMSVRIIG 300 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHHHHHHH
Confidence 3333334444444456778887665 45556677777777888888889999999996 9999999988888887766
Q ss_pred HHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHH-HHHH
Q 021653 106 LTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW-YYFV 184 (309)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~-~~~~ 184 (309)
..... +.+.+++...+.|++..........+..+..+++ .+++..+. ++..
T Consensus 301 ~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~at~~~~~~~~~ 352 (396)
T TIGR00882 301 SSFAT----------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVR------LSATIYLIGFQFA 352 (396)
T ss_pred HHhcC----------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc------eEEEeehHHHHHH
Confidence 55443 5566677778888887666656666677777765 45665554 5678
Q ss_pred HHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHH
Q 021653 185 MGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (309)
Q Consensus 185 ~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~ 222 (309)
..+|+.+++.+.+++.+..||+.+|.+.+++.++..++
T Consensus 353 ~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 353 KQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999888776665544
No 157
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.21 E-value=2.3e-09 Score=99.97 Aligned_cols=168 Identities=8% Similarity=0.020 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Q 021653 25 PFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMI 104 (309)
Q Consensus 25 ~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~ 104 (309)
+......++.....+....++++|+.+.+|+++.+.+.+.+...++..++.++.|+++||+ |+++.+.++..+..++.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~~ 280 (382)
T PRK10091 202 WLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLALL 280 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHHH
Confidence 3333333344444445556678888888999999999999999999999999999999996 999999988887777765
Q ss_pred HHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhh-cccCCCChhhhhhhhHHHHHHHH
Q 021653 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGA-DQFDETDPKQATKTWKYFNWYYF 183 (309)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~a-d~~~~~~~~~~~~r~~~~~~~~~ 183 (309)
+...... +.....+..++.++|.++..+....... +..+.+ .++... .+.
T Consensus 281 ~~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~~--~~~ 331 (382)
T PRK10091 281 MLFFFGG---------------------MKTASLIFAFICCAGLFALSAPLQILLLQNAKGGE------LLGAAG--GQI 331 (382)
T ss_pred HHHHHHh---------------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcch------HHHHHH--HHH
Confidence 5543220 2333444455556665554444333333 333322 344332 355
Q ss_pred HHHHHHHHHHHHHHHhhcc-ccchhhhhHHHHHHHHHHHH
Q 021653 184 VMGAAILVAVTVLVYIQDN-IGWGWGLGIPTFAMFLSIIA 222 (309)
Q Consensus 184 ~~~iG~~l~~~~~~~i~~~-~gw~~~f~i~~~~~~~~~~~ 222 (309)
..++|..+||.+.+++.+. .+|+..+.+.+++.++....
T Consensus 332 ~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 371 (382)
T PRK10091 332 AFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSS 371 (382)
T ss_pred HHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHH
Confidence 6789999999999998874 68998888877666554433
No 158
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.21 E-value=8.4e-10 Score=106.63 Aligned_cols=152 Identities=9% Similarity=-0.025 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Q 021653 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (309)
Q Consensus 24 ~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~ 103 (309)
........++..+.+++...+++.|+++.+|+++.+++.......++..++.+++|++.||+ |||+.+..+.++..++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~~~ 339 (495)
T PRK14995 261 ILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSALSF 339 (495)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHH
Confidence 33344455555666677777889999999999999999999999999999999999999996 99999988888887777
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHH
Q 021653 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (309)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~ 183 (309)
+++.... ...+.+......++.|+|.|...+.......+..|++ +++...+.++.
T Consensus 340 ~~l~~~~-------------------~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~------~~g~~~~~~~~ 394 (495)
T PRK14995 340 YGLAMTD-------------------FSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPE------KAAAAGAIETM 394 (495)
T ss_pred HHHHHhc-------------------CCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHH------hcchHHHHHHH
Confidence 6655432 0113344556678889999998888888888888876 68899999999
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 021653 184 VMGAAILVAVTVLVYIQD 201 (309)
Q Consensus 184 ~~~iG~~l~~~~~~~i~~ 201 (309)
..++|+.+|+.+.+.+.+
T Consensus 395 ~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 395 AYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999988877754
No 159
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.20 E-value=3.9e-09 Score=97.70 Aligned_cols=159 Identities=11% Similarity=0.088 Sum_probs=112.1
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Q 021653 28 FSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLT 107 (309)
Q Consensus 28 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~ 107 (309)
.+...+....++....+.+.|+++++|+++.+.+.+.....++..++.++.|+++||+ |||+.+.++..+..++.+++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~ 290 (385)
T TIGR00710 212 ALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVSAVLLE 290 (385)
T ss_pred HHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHH
Confidence 3333444445556666778888889999999999999999999999999999999996 999999988888777776665
Q ss_pred HHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHH
Q 021653 108 ISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGA 187 (309)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~i 187 (309)
.....+ ......++....+.|+|.+...+.......|.+|+ ++++..+.++.....
T Consensus 291 ~~~~~~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~~~ 346 (385)
T TIGR00710 291 ITAILG-----------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPH-------VAGTASALFGTLRLV 346 (385)
T ss_pred HHHHhc-----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-------cchHHHHHHHHHHHH
Confidence 543100 01334455556778899998888888888888764 478888887766655
Q ss_pred HHHHHHHHHHHhhccccchhhhhH
Q 021653 188 AILVAVTVLVYIQDNIGWGWGLGI 211 (309)
Q Consensus 188 G~~l~~~~~~~i~~~~gw~~~f~i 211 (309)
++.+.+.+.+.+.+..+|...+..
T Consensus 347 ~g~i~~~~~~~~~~~~~~~~~~~~ 370 (385)
T TIGR00710 347 LGAIVGYLVSLIHGNTAWPMSLSC 370 (385)
T ss_pred HHHHHHHHHHhccccChHHHHHHH
Confidence 444444444555555555544433
No 160
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.19 E-value=2e-09 Score=99.14 Aligned_cols=153 Identities=10% Similarity=-0.002 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g 102 (309)
..+.+.....+....++....++|.|++ +.|++..+.+.+.+...++..++.++.|+++||+-+||+.+.++.++..++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 276 (355)
T TIGR00896 198 LAWQVTVFFGLQSGLYYSLIGWLPAILI-SHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVG 276 (355)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHH
Confidence 3444444455556677777888999986 479999999999999999999999999999999524666777777777777
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHH
Q 021653 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (309)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~ 182 (309)
.+.+.... +.... ...++.|+|.|...+.......+..++++ +++...+..+
T Consensus 277 ~~~~~~~~----------------------~~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~ 328 (355)
T TIGR00896 277 LCGLLFAP----------------------MHGLW-AWALVLGLGQGGAFPLALTLIGLRSRQAA-----QAAALSAMAQ 328 (355)
T ss_pred HHHHHHhh----------------------hhHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHH-----HHHHHHHHHH
Confidence 66665433 11111 13457789998888877776666555432 5778888878
Q ss_pred HHHHHHHHHHHHHHHHhhcccc
Q 021653 183 FVMGAAILVAVTVLVYIQDNIG 204 (309)
Q Consensus 183 ~~~~iG~~l~~~~~~~i~~~~g 204 (309)
...++|..++|.+.+++.+..|
T Consensus 329 ~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 329 SIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 7888899999999999988765
No 161
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.17 E-value=7.6e-09 Score=97.11 Aligned_cols=153 Identities=10% Similarity=0.170 Sum_probs=104.9
Q ss_pred HHHHHhHHhcCCCHHHHHHHHHHHH-HHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 021653 44 NMISYLTTQLHMPLTKAANTLTNFG-GTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEG 122 (309)
Q Consensus 44 ~l~~yl~~~~~~s~~~~~~~~~~~~-~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 122 (309)
..+.|+.+++|++..+.+.+..... ++..++.+++|++.||+ |||+.+.++.++..+..+........+
T Consensus 231 ~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~~l~~~~~~~~~--------- 300 (402)
T PRK11902 231 LSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVSNLGYWVLAVTP--------- 300 (402)
T ss_pred HHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHhcC---------
Confidence 3455777789999999988876554 45788899999999996 999988877776655544333222111
Q ss_pred ccccccccchhHHHHHHHH----HHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 021653 123 EQVCQEANKGQVAILYVSL----LLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVY 198 (309)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~----~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~ 198 (309)
.+.+.++... +..+++.+...+....+..+.+|.+ .++ .+....++|..++..+++.
T Consensus 301 ---------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~----~~~~~~~l~~~~~~~~~G~ 361 (402)
T PRK11902 301 ---------KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSAT------QYA----LLSALASVGRVYVGPTSGY 361 (402)
T ss_pred ---------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHH------HHH----HHHHHHHHHHHHHHHHHHH
Confidence 0333333333 3456667777788888888887754 333 3333445676666668899
Q ss_pred hhccccchhhhhHHHHHHHHHHHHHHH
Q 021653 199 IQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (309)
Q Consensus 199 i~~~~gw~~~f~i~~~~~~~~~~~~~~ 225 (309)
+.+..||+..|.+.+++.+++.++.+.
T Consensus 362 l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 362 LVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988887777655433
No 162
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.17 E-value=5.8e-09 Score=97.44 Aligned_cols=174 Identities=15% Similarity=0.045 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHH-HHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Q 021653 25 PFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGG-TGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (309)
Q Consensus 25 ~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~-~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~ 103 (309)
+..+...++..........+.+.|+.+ .|+++.+.+.+...... ...++.+++|++.||+ |+++.+.++..+..+..
T Consensus 211 ~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~~ 288 (390)
T TIGR02718 211 WSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGSLA 288 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHH
Confidence 333334444445455555667788864 79999999988877654 5567788999999996 99999988776653333
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHH
Q 021653 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (309)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~ 183 (309)
+.......... .......+....+.+++.|...+.......+..++++ .+++.++.++.
T Consensus 289 ~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~ 347 (390)
T TIGR02718 289 LLWFAQAAFWL----------------APGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGD-----QAGTDVTAVQS 347 (390)
T ss_pred HHHHHHHHccc----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc-----chHHHHHHHHH
Confidence 32222110000 0022233333444556666666666677666665522 68999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHH
Q 021653 184 VMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSII 221 (309)
Q Consensus 184 ~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~ 221 (309)
..++|..+++.+.+++.+..||+..|.+.+++.+++.+
T Consensus 348 ~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 348 TRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 99999999999999999989999888887776666543
No 163
>PRK10133 L-fucose transporter; Provisional
Probab=99.17 E-value=3e-09 Score=101.23 Aligned_cols=161 Identities=14% Similarity=0.096 Sum_probs=117.0
Q ss_pred HHHHHHHHHHHhhHHHHHHHh-HHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Q 021653 29 SNEVCEKLAVVGFNTNMISYL-TTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLT 107 (309)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl-~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~ 107 (309)
+..++.....++...+++.|+ ++.+|+++.+++.....+.++..++.+++|++.||+ |||+++..+.++..++..+..
T Consensus 265 l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~~~~ 343 (438)
T PRK10133 265 LAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMALCLISA 343 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHH
Confidence 333444455555566788886 567899999999999999999999999999999996 999999888777666554443
Q ss_pred HHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHH
Q 021653 108 ISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGA 187 (309)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~i 187 (309)
+.. +. .-+.+..+.|+|.+...|.......|.++++ .+...+.... ..+
T Consensus 344 ~~~----------------------~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-------~~~as~l~~~-~~~ 392 (438)
T PRK10133 344 FAG----------------------GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-------TKYGSSFIVM-TII 392 (438)
T ss_pred HcC----------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchh-------hccchhHHhH-Hhc
Confidence 322 11 1244567789999999999999999998764 2222222222 335
Q ss_pred HHHHHHHHHHHhhcccc-chhhhhHHHHHHHHHHH
Q 021653 188 AILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSII 221 (309)
Q Consensus 188 G~~l~~~~~~~i~~~~g-w~~~f~i~~~~~~~~~~ 221 (309)
|+.+++.+.+.+.+..| -+..|+++.+..+....
T Consensus 393 g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~ 427 (438)
T PRK10133 393 GGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFI 427 (438)
T ss_pred cchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 77788888999988887 67888877665554443
No 164
>PRK09848 glucuronide transporter; Provisional
Probab=99.16 E-value=2e-09 Score=102.53 Aligned_cols=162 Identities=12% Similarity=0.121 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g 102 (309)
......+..++....++......+.|+++.+|.+....+........+..++.++.++++||+ |+|+++.++.++..++
T Consensus 229 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i~ 307 (448)
T PRK09848 229 PLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTCG 307 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 344444555555565555566667777777887766555444444566777889999999996 9999999999888888
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChh-hhhhhhHHHHHH
Q 021653 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPK-QATKTWKYFNWY 181 (309)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~-~~~~r~~~~~~~ 181 (309)
.+++.+.. ..+.+.+++..++.++|.+...+...++.+|..|.++-+ .+++.|..++.+
T Consensus 308 ~~~~~~~~--------------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~ 367 (448)
T PRK09848 308 YLLFFWVS--------------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLF 367 (448)
T ss_pred HHHHHHcC--------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHH
Confidence 77766432 114555667778889999999999999999988865311 122468888999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccc
Q 021653 182 YFVMGAAILVAVTVLVYIQDNIGW 205 (309)
Q Consensus 182 ~~~~~iG~~l~~~~~~~i~~~~gw 205 (309)
++...+|..+++.+.+.+.+..|+
T Consensus 368 ~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 368 SFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999888776555554
No 165
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.16 E-value=1e-08 Score=96.16 Aligned_cols=165 Identities=12% Similarity=0.031 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHH-
Q 021653 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG- 102 (309)
Q Consensus 24 ~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g- 102 (309)
.+..+...++.....++...++++++.+++|++..+.+.+.....++..++.++.|++.||. +|+..+. +.++..+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~~l~~-~~~~~~~~~ 295 (394)
T PRK10213 218 VMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKLALAG-APLVLAVSA 295 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHH-HHHHHHHHH
Confidence 34433444444445555556665555568899999999988888889999999999999994 5544344 33333333
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHH
Q 021653 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (309)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~ 182 (309)
.++..... +.+.+.+..++.|++.+...+....++.+..|++ +++..+.++
T Consensus 296 ~~l~~~~~----------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 346 (394)
T PRK10213 296 LVLTLWGS----------------------DKIVATGVAIIWGLTFALVPVGWSTWITRSLADQ-------AEKAGSIQV 346 (394)
T ss_pred HHHHHHhh----------------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCccc-------HHHHHHHHH
Confidence 33333222 4556667778889999999988888888887743 445556666
Q ss_pred HHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHH
Q 021653 183 FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLS 219 (309)
Q Consensus 183 ~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~ 219 (309)
...++|..+|+.+.|++.+..|++..+...+++.++.
T Consensus 347 ~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 347 AVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHH
Confidence 6778999999999999999889888887766554433
No 166
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.16 E-value=3.8e-09 Score=100.48 Aligned_cols=185 Identities=11% Similarity=0.049 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g 102 (309)
..|.+.+..++....+.+...++|.|+++.+. ............+...+..+++|+++||+ |+++++.++.++..++
T Consensus 253 ~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~--~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i~ 329 (462)
T PRK15034 253 HLWLLSLLYLATFGSFIGFSAGFAMLAKTQFP--DVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAIF 329 (462)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHHH
Confidence 35666666666666666677789999887663 33333334445677788889999999996 9999999988877766
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCC------C----C-----
Q 021653 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDE------T----D----- 167 (309)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~------~----~----- 167 (309)
........ |.- ...+...+.++.+.+.++.|.-...+..++.+.||+ + +
T Consensus 330 ~~~~~l~l--p~~--------------~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~ 393 (462)
T PRK15034 330 SALLFLTL--PGT--------------GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQ 393 (462)
T ss_pred HHHHHHHh--ccc--------------cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHh
Confidence 54433322 210 112455566655555555555555666666666663 0 0
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccc-cchhhhhHHHHHHHHHHHHHHHh
Q 021653 168 PKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNI-GWGWGLGIPTFAMFLSIIAFLIG 226 (309)
Q Consensus 168 ~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~-gw~~~f~i~~~~~~~~~~~~~~~ 226 (309)
...+++-|...++......+|+++-|.+.+...+.. ++..+|+...+..++..++-|..
T Consensus 394 ~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 394 REAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 111235677888888888898999898877665554 47788888777777766665543
No 167
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.16 E-value=2e-09 Score=113.81 Aligned_cols=162 Identities=10% Similarity=0.022 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHH-HHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Q 021653 25 PFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLT-KAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (309)
Q Consensus 25 ~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~-~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~ 103 (309)
+..++..++..+..+.+..+++.|+.+.+|++.. ..+.+.+...++..++.+++|+++||+ ++++.+.++.++..++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~~~ 313 (1146)
T PRK08633 235 WLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLALSL 313 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHHHHH
Confidence 3333444444445555677889999999999998 899999999999999999999999996 99998888888777777
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHH
Q 021653 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (309)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~ 183 (309)
+++.... +.+.+++..++.|++.++..+...+++.+..|++ .|++.++.+++
T Consensus 314 ~~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~rg~~~~~~~~ 365 (1146)
T PRK08633 314 FLLPTAP----------------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEK------ELGKVLAANNF 365 (1146)
T ss_pred HHHHHhh----------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCcc------chhhhhHHHHH
Confidence 6666544 5566777778889999998888899999999987 69999999999
Q ss_pred HHHHHHHHHHHHHHHhhc-cccchhhhhHHHHH
Q 021653 184 VMGAAILVAVTVLVYIQD-NIGWGWGLGIPTFA 215 (309)
Q Consensus 184 ~~~iG~~l~~~~~~~i~~-~~gw~~~f~i~~~~ 215 (309)
..++|..+++.+.+.+.. .+++...|++.+.+
T Consensus 366 ~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 398 (1146)
T PRK08633 366 LQNVGMLLFLALTTLFSGLGLSPAGLFYLIALV 398 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 999998887776665543 23444455444433
No 168
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.14 E-value=8.4e-09 Score=97.61 Aligned_cols=156 Identities=12% Similarity=0.056 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccch-HHHHHHHHHHHHHHHHHHH
Q 021653 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGR-FWTITIASIIYQIGMICLT 107 (309)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR-~~~i~i~~~l~~~g~~~~~ 107 (309)
+..++....+-.....++.|+++++|++..+.+++.+.+.++..+++++.|.++||+ || |+++.++.++..++..+..
T Consensus 9 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~~~~~~~~ 87 (418)
T TIGR00889 9 FMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGALLLFFAA 87 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHHH
Confidence 334444444444567889999999999999999999999999999999999999996 65 7788877777666666555
Q ss_pred HHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhh----h----cccCCCChhhhhhhhHHHH
Q 021653 108 ISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFG----A----DQFDETDPKQATKTWKYFN 179 (309)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~----a----d~~~~~~~~~~~~r~~~~~ 179 (309)
+.. +.+.+++.+.+.+++.+...+...+.. + |..... .|.+.++
T Consensus 88 ~~~----------------------~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~------~~~r~~G 139 (418)
T TIGR00889 88 QVT----------------------TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDF------PPIRVMG 139 (418)
T ss_pred Hhc----------------------CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcC------CCeeeeh
Confidence 544 566777788888887666555444332 1 211111 2333333
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHH
Q 021653 180 WYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSI 220 (309)
Q Consensus 180 ~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~ 220 (309)
.+|..+++.+.+.+.....|. +|++.+++.++..
T Consensus 140 ------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~ 173 (418)
T TIGR00889 140 ------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLG 173 (418)
T ss_pred ------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHH
Confidence 367888888888774333344 4555555444433
No 169
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.14 E-value=1.6e-09 Score=104.76 Aligned_cols=165 Identities=17% Similarity=0.107 Sum_probs=104.9
Q ss_pred HHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHH------------HHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHH
Q 021653 31 EVCEKLAVVGFNTNMISYLTTQLHMPLTKAAN------------TLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (309)
Q Consensus 31 ~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~------------~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l 98 (309)
.++..+.+|++..++|.+++ +.|++..+++. .......+..++.+++++++||+ |||++++++..+
T Consensus 297 ~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~~~~ 374 (502)
T TIGR00887 297 WFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMGFFI 374 (502)
T ss_pred HHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHHHHH
Confidence 34455677888888888885 56775432111 12223345556778899999996 999999888877
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHH
Q 021653 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (309)
Q Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~ 178 (309)
..++..++...... .. +...+....+...++..+..+....+.+|.+|.+ .|++..
T Consensus 375 ~~~~~~~l~~~~~~-----------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~------~R~~~~ 430 (502)
T TIGR00887 375 LTVLFFVLGFAYNH-----------------LS-THGFLAIYVLAQFFANFGPNATTFIVPGEVFPTR------YRSTAH 430 (502)
T ss_pred HHHHHHHHHHHHHh-----------------cc-hhHHHHHHHHHHHHHhcCCCchhhhhhhccCchh------HHHHHH
Confidence 77666555543200 00 1111111111122222233445667789999998 799999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcc----------ccchhhhhHHHHHHHHHHH
Q 021653 179 NWYYFVMGAAILVAVTVLVYIQDN----------IGWGWGLGIPTFAMFLSII 221 (309)
Q Consensus 179 ~~~~~~~~iG~~l~~~~~~~i~~~----------~gw~~~f~i~~~~~~~~~~ 221 (309)
++.+....+|+++++.+.+++.+. .++...|++.+++.+++.+
T Consensus 431 g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i 483 (502)
T TIGR00887 431 GISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGIL 483 (502)
T ss_pred HHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHH
Confidence 999999999999999999988763 3344566666666555543
No 170
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.14 E-value=2.7e-09 Score=101.07 Aligned_cols=163 Identities=17% Similarity=0.155 Sum_probs=131.2
Q ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHH
Q 021653 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (309)
Q Consensus 22 ~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~ 101 (309)
|....+++..++..++.......++.|.+..+|.+ ...+.+..+..+...++.++.++++||+ |||+++..+.++.++
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAAL 302 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHH
Confidence 55666667777777777767777778888778877 4556667778888899999999999996 999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChh-hhhhhhHHHHH
Q 021653 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPK-QATKTWKYFNW 180 (309)
Q Consensus 102 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~-~~~~r~~~~~~ 180 (309)
+.+++.+.. ..+.+.+++..++.|+|.|.......++.+|..+.++.+ ++++.|..++.
T Consensus 303 ~~~~~~~~~--------------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~ 362 (428)
T PF13347_consen 303 GFLLLFFLG--------------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSV 362 (428)
T ss_pred HHHHHHHHH--------------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHh
Confidence 988887764 126788888889999999999999999999999865322 23457888999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccch
Q 021653 181 YYFVMGAAILVAVTVLVYIQDNIGWG 206 (309)
Q Consensus 181 ~~~~~~iG~~l~~~~~~~i~~~~gw~ 206 (309)
+.+...+|..++..+.+.+.+..|+.
T Consensus 363 ~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 363 NSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 99999999999998888776554443
No 171
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.13 E-value=2.8e-09 Score=102.42 Aligned_cols=169 Identities=9% Similarity=0.034 Sum_probs=113.7
Q ss_pred HHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHH----hccch-HHHHHHHHHHHHHHHH
Q 021653 30 NEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVAD----AYAGR-FWTITIASIIYQIGMI 104 (309)
Q Consensus 30 ~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD----~~~GR-~~~i~i~~~l~~~g~~ 104 (309)
..+..++.+..+..+++.|+++.+|+++..++.+..+..+.-.+..++.|+++| | +|| |+-++++.+...++..
T Consensus 14 g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr-~Grrrp~il~g~i~~~i~~~ 92 (473)
T PRK10429 14 GAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSR-WGKFKPWILIGTLANSVVLF 92 (473)
T ss_pred chhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCC-CCCcchhHhhhhHHHHHHHH
Confidence 345556666677788999999999999999999999999999999999999999 5 498 5556666666666655
Q ss_pred HHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHH
Q 021653 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 184 (309)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~ 184 (309)
++... |.. +.......+++..++.+++......+..++.+|..++.+ +|.+..++-...
T Consensus 93 llf~~---p~~-------------~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~-----eR~~l~~~~~~~ 151 (473)
T PRK10429 93 LLFSA---HLF-------------EGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKR-----EREQLVPYPRFF 151 (473)
T ss_pred HHHcC---CCC-------------CccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHH-----HHHHHHHHHHHH
Confidence 55321 110 011133344455556678888888888899999875443 788888876666
Q ss_pred HHHHHHHHHHHHHHhhc-------cccchhhhhHHHHHHHHHH
Q 021653 185 MGAAILVAVTVLVYIQD-------NIGWGWGLGIPTFAMFLSI 220 (309)
Q Consensus 185 ~~iG~~l~~~~~~~i~~-------~~gw~~~f~i~~~~~~~~~ 220 (309)
.++|+.+.+.+...+.+ ..+|+....+.+++.++..
T Consensus 152 ~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~ 194 (473)
T PRK10429 152 ASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVST 194 (473)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH
Confidence 77776665444332211 1245554445544444433
No 172
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.12 E-value=1.9e-09 Score=99.36 Aligned_cols=172 Identities=14% Similarity=0.150 Sum_probs=140.7
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g 102 (309)
.+...++..++-+=....+.+....|..+++|++..+...+....+..+.++++++|+|.||+ |-|+++.++.+++.+.
T Consensus 253 ~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~~ 331 (438)
T COG2270 253 NLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSIA 331 (438)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHHH
Confidence 555555555555555556677778899999999999999999999999999999999999995 9999999999988877
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHH
Q 021653 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (309)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~ 182 (309)
.+...+.. ....+.+.-++.|+..|+.++..=.+.++..|++ +-+++|+.|.
T Consensus 332 ~~~~~~~~----------------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~------k~~~fFglya 383 (438)
T COG2270 332 ALYLIFLE----------------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPKG------KEGRFFGLYA 383 (438)
T ss_pred HHHHHHcc----------------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCc------cccceeehhh
Confidence 76666544 3444556667889999999999999999999988 7899999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccc-chhhhhHHHHHHHHHHHHH
Q 021653 183 FVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAF 223 (309)
Q Consensus 183 ~~~~iG~~l~~~~~~~i~~~~g-w~~~f~i~~~~~~~~~~~~ 223 (309)
+.....+.+||+..+.+.+..| -|.++....++..++++++
T Consensus 384 ltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L 425 (438)
T COG2270 384 LTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLL 425 (438)
T ss_pred hhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhE
Confidence 9999999999999888877655 6677776666666666554
No 173
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.11 E-value=3.9e-09 Score=95.49 Aligned_cols=168 Identities=14% Similarity=0.110 Sum_probs=117.8
Q ss_pred hhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 021653 40 GFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPP 119 (309)
Q Consensus 40 ~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~ 119 (309)
.....+.+-+....+++..++..+......+..+++...|.++|+. |||+...+..+..++...+-..+.
T Consensus 95 m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~~sp--------- 164 (528)
T KOG0253|consen 95 MLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISGASP--------- 164 (528)
T ss_pred HHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhcCCC---------
Confidence 3344444555667788889999999999999999999999999996 999988877665544433333332
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 021653 120 CEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI 199 (309)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i 199 (309)
+...+.+.|.+.|+|.|+ .|...++-.|-.|.. +|....-.. ....+|......+.-.+
T Consensus 165 -------------nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~------~r~~~~V~~-~~waig~v~ea~law~v 223 (528)
T KOG0253|consen 165 -------------NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSS------HRWLLTVMS-FFWAIGQVFEALLAWGV 223 (528)
T ss_pred -------------CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCc------CCCcchhHH-HHHHHHHHHHHHHHHHH
Confidence 677788999999999999 777778888988876 344433332 44567777776666666
Q ss_pred hccccchhhhhHHHHHHHHH-HH-HHHHhCcceeccCCCCC
Q 021653 200 QDNIGWGWGLGIPTFAMFLS-II-AFLIGYPLYRNLDPAGS 238 (309)
Q Consensus 200 ~~~~gw~~~f~i~~~~~~~~-~~-~~~~~~~~~~~~~~~~~ 238 (309)
..+.|||+-+........+. .. ....++|||..-+.+..
T Consensus 224 m~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~ 264 (528)
T KOG0253|consen 224 MSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDY 264 (528)
T ss_pred HHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChH
Confidence 67889998766655433332 22 23456778765544433
No 174
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.10 E-value=6.6e-09 Score=97.66 Aligned_cols=153 Identities=8% Similarity=-0.043 Sum_probs=107.8
Q ss_pred hHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 021653 41 FNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPC 120 (309)
Q Consensus 41 ~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~ 120 (309)
....+|.|+++..+ ++.+.+.+.+....+...+....+++.|+.++.++.+..+.++..++.+++....
T Consensus 227 ~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~---------- 295 (400)
T PRK11646 227 VMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS---------- 295 (400)
T ss_pred HHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh----------
Confidence 34567888876555 6677777766666555545555566666544767777777777777766665544
Q ss_pred CCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 021653 121 EGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQ 200 (309)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~ 200 (309)
+...+.+...+.++|.+...+....+..|..|++ +|++..+.++...++|..+||.+.+++.
T Consensus 296 ------------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~------~~g~~~g~~~~~~~~g~~ig~~l~G~l~ 357 (400)
T PRK11646 296 ------------NLQQLFTLICLFYIGSIIAEPARETLSASLADAR------ARGSYMGFSRLGLALGGAIGYIGGGWLF 357 (400)
T ss_pred ------------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcc------cchhhhhHHHHHHHHHHHhcccchHHHH
Confidence 4455556667778888888888889999999987 7999999999999999999999999988
Q ss_pred ccc---c-chhhhhHHHHHHHHHHHH
Q 021653 201 DNI---G-WGWGLGIPTFAMFLSIIA 222 (309)
Q Consensus 201 ~~~---g-w~~~f~i~~~~~~~~~~~ 222 (309)
+.. + ....+++..++.+++.+.
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 358 DLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 764 2 234555544444444433
No 175
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.10 E-value=2.1e-08 Score=93.72 Aligned_cols=176 Identities=11% Similarity=-0.064 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHH--HHHHHHHHhHHHHH-HHHHHhccchHHHHHHHHHHHHH
Q 021653 25 PFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTL--TNFGGTGSLTPLIG-AFVADAYAGRFWTITIASIIYQI 101 (309)
Q Consensus 25 ~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~--~~~~~~~~~~~l~~-G~laD~~~GR~~~i~i~~~l~~~ 101 (309)
..+....+.+.+.+......+|.|++ +.|+|..+.+... ......-.+.+++. ++.+||+ ||||.+++.+.+...
T Consensus 4 ~~~~~ly~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~~ 81 (390)
T TIGR02718 4 ITLGLLYLSQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLVS 81 (390)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHHH
Confidence 34445566666666666677888875 6699999999863 44566665556555 6688985 999997666533222
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHH
Q 021653 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (309)
Q Consensus 102 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~ 181 (309)
. .+...+...+. ......+.....+.++..+...+....+..|..+++ +++...+..
T Consensus 82 ~-~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~------~~~~~~~~~ 138 (390)
T TIGR02718 82 A-CLASLALVGPD----------------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNGR------TLAKGNAVQ 138 (390)
T ss_pred H-HHHHHHcCCcc----------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh------hhhHHHHHH
Confidence 1 12222110010 012223333344455666666666776777776654 567777777
Q ss_pred HHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHH
Q 021653 182 YFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (309)
Q Consensus 182 ~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~ 225 (309)
.++..+|..++..+.+++.+..||+..|++.+++.++..+..+.
T Consensus 139 ~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~ 182 (390)
T TIGR02718 139 IAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLW 182 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 77888999999988889999999999999988877665554433
No 176
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.10 E-value=3.1e-09 Score=112.43 Aligned_cols=182 Identities=10% Similarity=-0.010 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g 102 (309)
.++.+++..++..+..+.+..++|.|+++.+|.+....+.+.+.+.++..++.++.|+++|++ ++++.+..+.++..++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~~ 304 (1140)
T PRK06814 226 RIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGLF 304 (1140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHHH
Confidence 445555555566666667778899999999999999999999999999999999999999986 6666555555544444
Q ss_pred HHHHHHHhhcCCCCCCC--CCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHH
Q 021653 103 MICLTISAILPQLRPPP--CEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (309)
Q Consensus 103 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 180 (309)
.+.+.+.. ........ +.....+ ...+.+.++++.++.|++.+...+...+++.+..|++ .+|+.++.
T Consensus 305 ~~~l~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~G~v~g~ 374 (1140)
T PRK06814 305 GLDLAFAS-SSVPAEPAQLKSILVFL---SKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPA------HRARVIAA 374 (1140)
T ss_pred HHHHHhcc-cccccccccccchhhhh---cccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcc------cceeeeHH
Confidence 44333320 00000000 0000000 0014456677788889999999999999999999988 79999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhc-cccchhhhhHHHHH
Q 021653 181 YYFVMGAAILVAVTVLVYIQD-NIGWGWGLGIPTFA 215 (309)
Q Consensus 181 ~~~~~~iG~~l~~~~~~~i~~-~~gw~~~f~i~~~~ 215 (309)
++...++|..+++++.+.+.+ ..++...+++.+++
T Consensus 375 ~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 375 NNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 999999999999999888863 44555555544443
No 177
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.10 E-value=6.6e-09 Score=99.86 Aligned_cols=165 Identities=14% Similarity=0.076 Sum_probs=114.9
Q ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHH
Q 021653 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (309)
Q Consensus 22 ~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~ 101 (309)
|....+++..++.....+......+.|++..++ +....+.+.+...+...++.++.++++||+ |||+++.++.++.++
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 555556666666666655555555444443333 445555566666677888889999999996 999999988887777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCC-hhhhhhhhHHHHH
Q 021653 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETD-PKQATKTWKYFNW 180 (309)
Q Consensus 102 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~-~~~~~~r~~~~~~ 180 (309)
+.+........+ ..+.+.+++..++.+++.+...+...++++|..|.++ +.++++.|..++.
T Consensus 309 ~~~~~~~~~~~~-----------------~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~ 371 (473)
T PRK10429 309 SCGVLLLMGLAA-----------------PHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSV 371 (473)
T ss_pred HHHHHHHHhccC-----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHH
Confidence 766554432111 1145566667778899999999999999999988542 1223356778889
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccc
Q 021653 181 YYFVMGAAILVAVTVLVYIQDNIGW 205 (309)
Q Consensus 181 ~~~~~~iG~~l~~~~~~~i~~~~gw 205 (309)
+.+...+|..+++.+.+++.+..|+
T Consensus 372 ~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 372 QTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999988887665555
No 178
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.09 E-value=4e-10 Score=104.39 Aligned_cols=176 Identities=14% Similarity=0.052 Sum_probs=119.2
Q ss_pred CccHHHHHHHHHHHHHHHH---HhhHHHHHHHhHHh-------cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchH
Q 021653 20 GMITMPFIFSNEVCEKLAV---VGFNTNMISYLTTQ-------LHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRF 89 (309)
Q Consensus 20 ~~~~~~~i~~~~~~~~~~~---~~~~~~l~~yl~~~-------~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~ 89 (309)
+|+-+..+++..+....-. +.+....+.+-.-- =|+++...+.+..+..++..+++++.||++|++ |||
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK 114 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRK 114 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cch
Confidence 7887777666544433322 22222222221111 136777888889999999999999999999996 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChh
Q 021653 90 WTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPK 169 (309)
Q Consensus 90 ~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~ 169 (309)
+++...+++.+++.+++.++. |..+...-...+...|+++|+|.|+-+|...+..+|..-.+
T Consensus 115 ~vYG~~liImIi~t~~~~~s~---------------~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~--- 176 (538)
T KOG0252|consen 115 KVYGKELIIMIICSALSGLSV---------------GTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKK--- 176 (538)
T ss_pred hhhhHHHHHHHHHHHHhccCC---------------CCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhc---
Confidence 999999999999998555433 22223346677889999999999999999999999987776
Q ss_pred hhhhhhHHHHHHHHH----HHHHHHHHHHHHHHhhcc-----------ccchhhhhHHHHHHH
Q 021653 170 QATKTWKYFNWYYFV----MGAAILVAVTVLVYIQDN-----------IGWGWGLGIPTFAMF 217 (309)
Q Consensus 170 ~~~~r~~~~~~~~~~----~~iG~~l~~~~~~~i~~~-----------~gw~~~f~i~~~~~~ 217 (309)
+||.+.++.... +-.|+.++.++..-.... .-||..|.+.++..+
T Consensus 177 ---~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~ 236 (538)
T KOG0252|consen 177 ---TRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPAL 236 (538)
T ss_pred ---cccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 687777654444 444444444443333221 238877776655443
No 179
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.08 E-value=5.2e-10 Score=106.00 Aligned_cols=178 Identities=12% Similarity=0.104 Sum_probs=126.4
Q ss_pred HHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHH----hccchHHHHH-HHHHHHHHHHHHH
Q 021653 32 VCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVAD----AYAGRFWTIT-IASIIYQIGMICL 106 (309)
Q Consensus 32 ~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD----~~~GR~~~i~-i~~~l~~~g~~~~ 106 (309)
+..++.+.....+++.|+++.+|+++...+.+..+..+...+..|+.|.++| | +||||..+ ++.++..++.+++
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr-~Grrrp~~l~g~i~~~~~~~ll 89 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTR-WGRRRPWILIGAILLALSFFLL 89 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeeccc-ccccceEeehhhHHHHHHHHHh
Confidence 4455555556678899999999999999999999999999999999999999 6 49776544 6777777777666
Q ss_pred HHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHH
Q 021653 107 TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 186 (309)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~ 186 (309)
.... |. +.+.......+.+..++..++......+..++.+|..++.+ +|.+..++-.....
T Consensus 90 f~~~--p~------------~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~-----~R~~l~~~~~~~~~ 150 (428)
T PF13347_consen 90 FSPP--PA------------GLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPD-----ERTRLSSWRMIFSM 150 (428)
T ss_pred hccc--cc------------hhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHh-----hhhhHHHHHHHHHH
Confidence 6431 10 00111133344566667789999999999999999988654 78888888888888
Q ss_pred HHHHHHHHHHHHhhccc-------cchhhhhHHHHHHHHHHHHHHHhCcc
Q 021653 187 AAILVAVTVLVYIQDNI-------GWGWGLGIPTFAMFLSIIAFLIGYPL 229 (309)
Q Consensus 187 iG~~l~~~~~~~i~~~~-------gw~~~f~i~~~~~~~~~~~~~~~~~~ 229 (309)
+|.++...+.+.+.+.. +|++...+.+++.++..++.....++
T Consensus 151 ~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 151 IGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 88876555544433211 57777777777666655555444444
No 180
>PRK10054 putative transporter; Provisional
Probab=99.08 E-value=5.8e-09 Score=97.91 Aligned_cols=172 Identities=11% Similarity=-0.001 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhHHh--cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHH
Q 021653 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQ--LHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (309)
Q Consensus 24 ~~~i~~~~~~~~~~~~~~~~~l~~yl~~~--~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~ 101 (309)
.+...+..++..+.......+++.|+... .+.+....+.+............++.|.+.||+ |+|+.+.++.++..+
T Consensus 208 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~~~ 286 (395)
T PRK10054 208 LLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCFVI 286 (395)
T ss_pred ehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHHHH
Confidence 34444444555544444445666666543 345555666666666666666778889999996 999999999888888
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHH
Q 021653 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (309)
Q Consensus 102 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~ 181 (309)
+.+.+.... .+.+.+.+...+.++|.+...+....++.+..|++ .+++.++.+
T Consensus 287 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~------~~~~~~~~~ 339 (395)
T PRK10054 287 GLVGFIFSG---------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPG------MKASYFSAQ 339 (395)
T ss_pred HHHHHHHcc---------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcc------cceehHhHH
Confidence 877665432 14455666778889998888888888888988876 677777765
Q ss_pred HHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHH
Q 021653 182 YFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFL 224 (309)
Q Consensus 182 ~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~ 224 (309)
+ ...+|..++|.+.+++.+..|....|++.++...++.++..
T Consensus 340 ~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 340 S-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred H-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 4 56689999999999999999888888776666555544433
No 181
>PRK11462 putative transporter; Provisional
Probab=99.06 E-value=1.7e-08 Score=96.64 Aligned_cols=171 Identities=12% Similarity=0.208 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHh---ccchHHHHH-HHHHHHHHHHH
Q 021653 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADA---YAGRFWTIT-IASIIYQIGMI 104 (309)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~---~~GR~~~i~-i~~~l~~~g~~ 104 (309)
...+..++.+..+..++..|+++.+|+++..++.+..+.-+.-.+.-|+.|.++|| .+||||..+ ++.+...++.+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence 34455566666677789999999999999999999999999999999999999997 369876555 45566666655
Q ss_pred HHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHH
Q 021653 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 184 (309)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~ 184 (309)
++... |.. +.......+++.-++..++..+...+..++.+|..++.+ +|++..++...+
T Consensus 96 llf~~---p~~-------------s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~-----eRt~l~s~r~~~ 154 (460)
T PRK11462 96 LAYST---PDL-------------SMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPT-----QRISLQSWRFVL 154 (460)
T ss_pred HHHhC---CCC-------------CcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHH-----HHHHHHHHHHHH
Confidence 54422 211 011123344455566688888888888899999987644 799999999888
Q ss_pred HHHHHHHHHHHHHHhhcc-------ccchhhhhHHHHHHHHHH
Q 021653 185 MGAAILVAVTVLVYIQDN-------IGWGWGLGIPTFAMFLSI 220 (309)
Q Consensus 185 ~~iG~~l~~~~~~~i~~~-------~gw~~~f~i~~~~~~~~~ 220 (309)
.++|..+++.+...+... .+|+....+.+++.++..
T Consensus 155 ~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~ 197 (460)
T PRK11462 155 ATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMML 197 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH
Confidence 888887776664433322 246655555555444433
No 182
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.06 E-value=3.4e-08 Score=89.69 Aligned_cols=151 Identities=13% Similarity=0.126 Sum_probs=104.7
Q ss_pred hHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccc
Q 021653 49 LTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQE 128 (309)
Q Consensus 49 l~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (309)
+.+++|++..+.+.+...-.+...+...+.|.++||+ |||+..++.++++.++.+... +.
T Consensus 60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~-~~------------------ 119 (354)
T PF05631_consen 60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKH-SS------------------ 119 (354)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHh-cc------------------
Confidence 3367999999999999999999999999999999997 999999999999988876433 22
Q ss_pred ccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHH-HHHHHHHHHHHHHHHHhhccccc--
Q 021653 129 ANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY-FVMGAAILVAVTVLVYIQDNIGW-- 205 (309)
Q Consensus 129 ~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~-~~~~iG~~l~~~~~~~i~~~~gw-- 205 (309)
++..++++|++.|+++....++--+.......+++- .+...+..++... +...+-++++-+++.++.+..+.
T Consensus 120 ----~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~-~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~ 194 (354)
T PF05631_consen 120 ----NYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGF-PQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGP 194 (354)
T ss_pred ----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCC
Confidence 678899999999999999988877766444333221 1113344443322 22222233333444455555554
Q ss_pred hhhhhHHHHHHHHHHHHHH
Q 021653 206 GWGLGIPTFAMFLSIIAFL 224 (309)
Q Consensus 206 ~~~f~i~~~~~~~~~~~~~ 224 (309)
..+|.....+.+++.++..
T Consensus 195 vaPF~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 195 VAPFDAAIVLLAVAAVLIL 213 (354)
T ss_pred cchHHHHHHHHHHHHHHHH
Confidence 5788877777766665543
No 183
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.06 E-value=7.7e-09 Score=95.21 Aligned_cols=144 Identities=13% Similarity=0.055 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHH-HHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHH
Q 021653 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFG-GTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (309)
Q Consensus 24 ~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~-~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g 102 (309)
.+.+++..++..+.++.....++.|+++ +|++..+.+.+.+... ....++.+++|+++||+ |||+.+.+++++..++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 288 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQALT 288 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHH
Confidence 5555555666677778888889999986 9999999888777655 56778899999999996 9999999888877776
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHH
Q 021653 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (309)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~ 182 (309)
..+.....+.... .+ ....+.+.+....++.+++.+...+...++..|.+|++ +||+.++.++
T Consensus 289 ~~~~~~~~~~~~~---------~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~------~~g~~~g~~~ 351 (356)
T TIGR00901 289 NAGFVWLASNGHH---------DG--ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPK------FGATQMALLS 351 (356)
T ss_pred HHHHHHHHhcCcc---------cc--cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCC------ccHHHHHHHH
Confidence 6655443200000 00 00014455666777889999999999999999999998 7999999876
Q ss_pred HHHH
Q 021653 183 FVMG 186 (309)
Q Consensus 183 ~~~~ 186 (309)
...+
T Consensus 352 ~~~~ 355 (356)
T TIGR00901 352 SLSA 355 (356)
T ss_pred HHHh
Confidence 6544
No 184
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.05 E-value=2.4e-08 Score=90.33 Aligned_cols=155 Identities=17% Similarity=0.219 Sum_probs=135.5
Q ss_pred HHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCc
Q 021653 44 NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGE 123 (309)
Q Consensus 44 ~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 123 (309)
.+..-.++++|+|.+.++.+++.-.++..+.+++..+++.|+ |-.+.+..+.++..+|.++-...
T Consensus 33 PLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~G~~iR~~~-------------- 97 (395)
T COG2807 33 PLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAAGILIRSLG-------------- 97 (395)
T ss_pred hhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHHHHHHHhcc--------------
Confidence 455667789999999999999999999999999999999995 99999999999988888776643
Q ss_pred cccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 021653 124 QVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNI 203 (309)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~ 203 (309)
+...++.+-.+.|.|.+......|..+-+-||++ -+...+.|..+.++|+.+++.+...+.++.
T Consensus 98 ---------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-------~~~mtglYs~sl~~~aaLaa~lavpla~~~ 161 (395)
T COG2807 98 ---------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-------VGLMTGLYSTSLGAGAALAAALAVPLAQHS 161 (395)
T ss_pred ---------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-------hhhHHhHHHHHHHHHHHHHhhhhhHHHHhh
Confidence 4566888899999999999999999999999974 888999999999999999999988887766
Q ss_pred -cchhhhhHHHHHHHHHHHHHHHhCcc
Q 021653 204 -GWGWGLGIPTFAMFLSIIAFLIGYPL 229 (309)
Q Consensus 204 -gw~~~f~i~~~~~~~~~~~~~~~~~~ 229 (309)
||+.....-+...++++++.++-..|
T Consensus 162 ~gW~~aL~~WAl~allAl~~WlPq~~r 188 (395)
T COG2807 162 GGWRGALGFWALLALLALLIWLPQALR 188 (395)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 79999999888888888777765333
No 185
>PRK09848 glucuronide transporter; Provisional
Probab=99.02 E-value=2.8e-08 Score=94.70 Aligned_cols=149 Identities=12% Similarity=0.066 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhc---cchHHHH-HHHHHHHHHHHH
Q 021653 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY---AGRFWTI-TIASIIYQIGMI 104 (309)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~---~GR~~~i-~i~~~l~~~g~~ 104 (309)
+..+..+..+..+..+++.|+++.+|++..+++.+.....+...+..++.|+++||. +|||+.+ .++.+...+..+
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~ 94 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSV 94 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHH
Confidence 345556666666677788899999999999999999999999999999999999994 4777755 455554444333
Q ss_pred HHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHH
Q 021653 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 184 (309)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~ 184 (309)
++.. . |. ..+.......+++...+.+++.+...++..++..+..++.+ +|....++-.++
T Consensus 95 ~~~~-~--~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-----~r~~~~~~r~~~ 154 (448)
T PRK09848 95 LVFW-V--PT------------DWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQ-----SRARLGAARGIA 154 (448)
T ss_pred HHHh-C--cC------------CCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHH-----HHHHHHHHHHHH
Confidence 3321 1 10 00011123334445567788888888777777777665532 566665555443
Q ss_pred H-----HHHHHHHHHHHH
Q 021653 185 M-----GAAILVAVTVLV 197 (309)
Q Consensus 185 ~-----~iG~~l~~~~~~ 197 (309)
. .+|..++|.+.+
T Consensus 155 ~~~~~~~~~~~~~p~i~~ 172 (448)
T PRK09848 155 ASLTFVCLAFLIGPSIKN 172 (448)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 3 344445555544
No 186
>TIGR00898 2A0119 cation transport protein.
Probab=99.00 E-value=1.1e-08 Score=98.69 Aligned_cols=141 Identities=11% Similarity=0.012 Sum_probs=98.6
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccc
Q 021653 51 TQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEAN 130 (309)
Q Consensus 51 ~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (309)
..++.+..... ....+....+.+++++++||+ |||+.+.++.++..++.+++.... .
T Consensus 351 ~~~~~~~~~~~---~~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~~---~---------------- 407 (505)
T TIGR00898 351 GNLGGNIYLDL---FISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFVP---V---------------- 407 (505)
T ss_pred cccCCChHHHH---HHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHcC---C----------------
Confidence 34555543322 234455667788999999996 999999999888777766655433 0
Q ss_pred chhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhh
Q 021653 131 KGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLG 210 (309)
Q Consensus 131 ~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~ 210 (309)
.......+..++.+++.++..+....+.+|.+|++ .|+...++.+....+|+.++|.+.+ +. ..++..++.
T Consensus 408 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~------~r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~ 478 (505)
T TIGR00898 408 -DLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTV------VRNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLV 478 (505)
T ss_pred -CchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHH------HHhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHH
Confidence 01233334445566677777788889999999987 7999999999999999999999888 43 345666777
Q ss_pred HHHHHHHHHHHHH
Q 021653 211 IPTFAMFLSIIAF 223 (309)
Q Consensus 211 i~~~~~~~~~~~~ 223 (309)
+.+++.+++.++.
T Consensus 479 ~~~~~~~~~~~~~ 491 (505)
T TIGR00898 479 LFGGLALLAGILT 491 (505)
T ss_pred HHHHHHHHHHHHH
Confidence 7666655554433
No 187
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.99 E-value=7e-08 Score=90.52 Aligned_cols=154 Identities=10% Similarity=0.037 Sum_probs=111.4
Q ss_pred HHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 021653 37 AVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLR 116 (309)
Q Consensus 37 ~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~ 116 (309)
........++.|+++.+|.++.+.+.+.....++..+++++.+++.|++ ++++.+..+..+ .+....+....
T Consensus 220 ~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~~-~~~~~~~~~~~------ 291 (393)
T PRK11195 220 AGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGILM-GLVVLLMALQH------ 291 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHHH-HHHHHHHHHHh------
Confidence 3344445567788888999999999999999999999999999999996 999888777533 22222233222
Q ss_pred CCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 021653 117 PPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVL 196 (309)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~ 196 (309)
+.+...+..++.|++.+...++......+..|++. .+|+.++..++..++|..++..+.
T Consensus 292 ----------------~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~-----~~g~~~a~~~~~~~~~~~~~~~~~ 350 (393)
T PRK11195 292 ----------------SLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLV-----GAGHSIAVQNFNENLAMLLMLGLY 350 (393)
T ss_pred ----------------HHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccc-----cchhHHHHHhHHHHHHHHHHHHHH
Confidence 44555566678889888888777777777655431 378999999999999999998887
Q ss_pred HHhhccccchhhhhHHHHHHHHHH
Q 021653 197 VYIQDNIGWGWGLGIPTFAMFLSI 220 (309)
Q Consensus 197 ~~i~~~~gw~~~f~i~~~~~~~~~ 220 (309)
+.+ +..|-+..+.+..+..++.+
T Consensus 351 ~~~-~~~~~~~~~~~~~~~~~~~~ 373 (393)
T PRK11195 351 SLL-VKLGVPVVAVIVGFGLLVAL 373 (393)
T ss_pred HHH-HHcCCCHHHHHHHHHHHHHH
Confidence 755 45676666665554444433
No 188
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.99 E-value=1.2e-08 Score=92.88 Aligned_cols=141 Identities=17% Similarity=0.248 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhHHhcCCC-HHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Q 021653 27 IFSNEVCEKLAVVGFNTNMISYLTTQLHMP-LTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMIC 105 (309)
Q Consensus 27 i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s-~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~ 105 (309)
++...++..+.++....+++.|+.+.+|++ ..+.+.+.+...+...++.++.|+++||+ |+++.+.+......++.+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~ 289 (352)
T PF07690_consen 211 LLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILGALG 289 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHH
Confidence 334444445566667888999989999999 78999999999999999999999999996 9988888777777666665
Q ss_pred HHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHH
Q 021653 106 LTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM 185 (309)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~ 185 (309)
+..... ..+....++..++.|++.+...+....+..|.+|++ ++++..+.++...
T Consensus 290 ~~~~~~-------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~~~~~ 344 (352)
T PF07690_consen 290 LLLLPF-------------------SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPE------YRGTAFGLFNSIG 344 (352)
T ss_dssp HCCSHH-------------------HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTC------HHHHHHHHHHHHH
T ss_pred HHHHHH-------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHHH
Confidence 554331 114556666778899999999999999999999887 7999999999999
Q ss_pred HHHHHHHH
Q 021653 186 GAAILVAV 193 (309)
Q Consensus 186 ~iG~~l~~ 193 (309)
++|+.++|
T Consensus 345 ~~~~~igP 352 (352)
T PF07690_consen 345 SLGGIIGP 352 (352)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHCC
Confidence 99999886
No 189
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.99 E-value=9.2e-08 Score=86.65 Aligned_cols=169 Identities=16% Similarity=0.108 Sum_probs=134.2
Q ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHH
Q 021653 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (309)
Q Consensus 22 ~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~ 101 (309)
+..|.+.+..-++++.+|.+..++|.++. +.|+|..+++..++..........+.+-.+++|.-.+|+.....+..+.+
T Consensus 208 ~~aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~ 286 (395)
T COG2807 208 PLAWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLV 286 (395)
T ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 34677777788899999999999999986 77999999999999999999999999999999766889988888888888
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHH
Q 021653 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (309)
Q Consensus 102 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~ 181 (309)
|.+.+.+.. . +...+. .+++|+|.|+..+....++.+..++.+ +-++..+.-
T Consensus 287 G~~G~~~~P---~------------------~~~~lw--~~llG~G~G~~F~laL~li~~rs~~a~-----~Aa~LSgma 338 (395)
T COG2807 287 GLVGLLLAP---G------------------QLPILW--ALLLGLGQGGAFPLALTLILLRSSDAA-----IAAALSGMA 338 (395)
T ss_pred HHHHHHHhh---h------------------hHHHHH--HHHHhCccchHHHHHHHHHHhhcCChH-----HHHHHHHHh
Confidence 888777544 1 222222 488999999999999999988776543 566666666
Q ss_pred HHHHHHHHHHHHHHHHHhhcccc-chhhhhHHHHHHHHH
Q 021653 182 YFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLS 219 (309)
Q Consensus 182 ~~~~~iG~~l~~~~~~~i~~~~g-w~~~f~i~~~~~~~~ 219 (309)
+....+=+..||++.|++-|..| |+..+...+.+.++.
T Consensus 339 Qg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m 377 (395)
T COG2807 339 QGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLM 377 (395)
T ss_pred hhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHH
Confidence 66666667789999999988764 877766655544433
No 190
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.98 E-value=4.8e-08 Score=90.95 Aligned_cols=165 Identities=10% Similarity=-0.062 Sum_probs=107.1
Q ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchH---HHHHH-HHH
Q 021653 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRF---WTITI-ASI 97 (309)
Q Consensus 22 ~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~---~~i~i-~~~ 97 (309)
+..+.+....++....+|++..++|.|++ +.|++.. .+........... +..++++||. .|| +.... ..+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~-~~g~s~~-~~~~~~l~~~~g~---~g~~~~~d~~-~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALR-PAGLEDI-AGDAVALAILAGL---IGVAVIPDRV-ARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCChH-HHHHHHHHHHHHH---HHHHHhhHHh-hhhhhHHHHHHHHHH
Confidence 44566767788888889999999999996 4678764 4444444444333 4457888885 543 33222 222
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHH
Q 021653 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (309)
Q Consensus 98 l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 177 (309)
+..++........ +.....+...+.+++.+...+...++.+|.+|++ .|++.
T Consensus 266 ~~a~~~~~~~~~~----------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~------~rgt~ 317 (368)
T TIGR00903 266 LIAAFFLALAFEL----------------------NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKE------LHGKA 317 (368)
T ss_pred HHHHHHHHHHHcc----------------------ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchh------hcCcc
Confidence 2222222222221 2222333445556667777777888999999998 79999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHH
Q 021653 178 FNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (309)
Q Consensus 178 ~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~ 222 (309)
.++.+...++|+..+|.+.+.+.. +-...|.+.++..+++.+.
T Consensus 318 ~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~ 360 (368)
T TIGR00903 318 AGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAI 360 (368)
T ss_pred cchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988877663 5555666666555554444
No 191
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.98 E-value=1.5e-07 Score=87.19 Aligned_cols=142 Identities=13% Similarity=-0.050 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Q 021653 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTI 108 (309)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~ 108 (309)
+...+.....+....+.+.++.+.+|+++.+.+.......++..++.+++|+++||+ |||+.+.++..+..+..+.+..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~ 279 (377)
T PRK11102 201 LASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIMGIWLVV 279 (377)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444455555667788888999999999999999999999999999999996 9999999888765544333332
Q ss_pred HhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHH-HHH
Q 021653 109 SAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV-MGA 187 (309)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~-~~i 187 (309)
.... +...+.+.++..+.+.+.+...+....+..|..|+ .+++..+.+... ..+
T Consensus 280 ~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~~~~ 334 (377)
T PRK11102 280 SALL------------------DLGFWALVVGVAAFVGCVSMISSNAMAVILDEFPH-------MAGTASSLAGTLRFGI 334 (377)
T ss_pred HHHH------------------hhhHHHHHHHHHHHHHHHHHhhHHHHHHHhccccc-------cchHHHHHHHHHHHHH
Confidence 2200 01333344444444555555555556667777663 467777665443 345
Q ss_pred HHHHHHHHH
Q 021653 188 AILVAVTVL 196 (309)
Q Consensus 188 G~~l~~~~~ 196 (309)
|+.+++.+.
T Consensus 335 g~~~g~~~~ 343 (377)
T PRK11102 335 GAIVGALLS 343 (377)
T ss_pred HHHHHHHHH
Confidence 666665543
No 192
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.95 E-value=1.8e-08 Score=97.33 Aligned_cols=176 Identities=16% Similarity=0.155 Sum_probs=141.9
Q ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccc--hHHHHHHHHHHH
Q 021653 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAG--RFWTITIASIIY 99 (309)
Q Consensus 22 ~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~G--R~~~i~i~~~l~ 99 (309)
+..+++.+...+..++++.....++.|.. ..+++..+++.+.++..+...++.++.|+++|+. . ++....++.++.
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 45555556666677777777777888876 8999999999999999999999999999999996 6 334444444454
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHH
Q 021653 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (309)
Q Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~ 179 (309)
.++...+.+.. +++.+...-++.|+..|...+..+..+.|..+.+ +....++
T Consensus 376 gl~~~~~p~~~----------------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~------~l~~a~G 427 (509)
T KOG2504|consen 376 GLARLFLPFAT----------------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLE------KLSNAYG 427 (509)
T ss_pred HHHHHHHHHhc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChh------hcchHHH
Confidence 45554555544 6677777778899999999998888999999987 7899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccc-chhhhhHHHHHHHHHHHHHHHhC
Q 021653 180 WYYFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAFLIGY 227 (309)
Q Consensus 180 ~~~~~~~iG~~l~~~~~~~i~~~~g-w~~~f~i~~~~~~~~~~~~~~~~ 227 (309)
+......++.+++|.+.+++.|..| |...|...++..+++.+..++..
T Consensus 428 l~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 428 LLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 9999999999999999999988887 99999999988888776655543
No 193
>PRK11043 putative transporter; Provisional
Probab=98.92 E-value=3.8e-07 Score=85.39 Aligned_cols=144 Identities=13% Similarity=0.079 Sum_probs=100.9
Q ss_pred HHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcC
Q 021653 34 EKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILP 113 (309)
Q Consensus 34 ~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~ 113 (309)
....++....++|.|++ ++|++..+.+........+..++.++++++.||+ |+|+.+....++..++.+.+......+
T Consensus 215 ~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (401)
T PRK11043 215 CSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLASLLS 292 (401)
T ss_pred HHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33444555566777775 5899999988877777788888999999999996 999977666655555544333222100
Q ss_pred CCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHH
Q 021653 114 QLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAV 193 (309)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~ 193 (309)
..+...+.++..+.+++.+...+.......|..|+ .+++..++++.....++..++
T Consensus 293 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~g~~~~~~~~~~~~~~ 348 (401)
T PRK11043 293 -----------------HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQ-------ATGKAAALQNTLQLGLCFLAS 348 (401)
T ss_pred -----------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc-------cChHHHHHHHHHHHHHHHHHH
Confidence 01334445556677888888888887777777764 488888888887777888888
Q ss_pred HHHHHhhccc
Q 021653 194 TVLVYIQDNI 203 (309)
Q Consensus 194 ~~~~~i~~~~ 203 (309)
.+.+.+.+..
T Consensus 349 ~~~g~l~~~~ 358 (401)
T PRK11043 349 LLVSALISTP 358 (401)
T ss_pred HHHHHccCCC
Confidence 8888776543
No 194
>PRK09669 putative symporter YagG; Provisional
Probab=98.91 E-value=1.3e-07 Score=90.10 Aligned_cols=125 Identities=12% Similarity=0.099 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHH
Q 021653 60 AANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYV 139 (309)
Q Consensus 60 ~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (309)
.+.+.....+...++.++.++++||+ |||+.+.++.++..++.+...+.. ..+.+.+++
T Consensus 266 ~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~ 324 (444)
T PRK09669 266 ATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVILSALIFFIP--------------------PSNVWLIFA 324 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHhC--------------------cchHHHHHH
Confidence 33444455566677888999999996 999999988766654433333221 115566777
Q ss_pred HHHHHHHhhhcchhhhhhhhhcccCCCChh-hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 021653 140 SLLLAALGSGGIRPCVVAFGADQFDETDPK-QATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGW 205 (309)
Q Consensus 140 ~~~l~gig~g~~~~~~~~~~ad~~~~~~~~-~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~gw 205 (309)
..++.|+|.+...+...++++|..|.++.+ ++++.|..++.+.+...+|..+++.+.+.+.+..|+
T Consensus 325 ~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 325 LNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 778899999999999999999998854321 233567788899999999999999998887776665
No 195
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.90 E-value=3.2e-07 Score=85.61 Aligned_cols=69 Identities=13% Similarity=0.142 Sum_probs=58.6
Q ss_pred hHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHh
Q 021653 41 FNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISA 110 (309)
Q Consensus 41 ~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~ 110 (309)
.....+.|+++++|++..+.+.+.....++..++.++.|++.||+ |||+.+.++..+..++.+++.+..
T Consensus 222 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~ 290 (392)
T PRK10473 222 FVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALSP 290 (392)
T ss_pred HHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344456778888999999999888888999999999999999996 999999999988888887777654
No 196
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.89 E-value=9.3e-08 Score=90.36 Aligned_cols=170 Identities=14% Similarity=0.130 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhc---cchHHHHH-HHHHHHHHHHH
Q 021653 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY---AGRFWTIT-IASIIYQIGMI 104 (309)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~---~GR~~~i~-i~~~l~~~g~~ 104 (309)
...+..++.+-.+..++..|+++.+|+++..++.+..+.-+.-++.-|+.|.+.||. +||+|-.+ .+.+-..+...
T Consensus 19 ~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~ 98 (467)
T COG2211 19 LGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAV 98 (467)
T ss_pred chhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHH
Confidence 345556666667788899999999999999999999999999999999999999983 68876554 44455555555
Q ss_pred HHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHH
Q 021653 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 184 (309)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~ 184 (309)
++..+.. ...+.+....++.-++.+++...+..+..++.+|+-++.. +|.+..+|-...
T Consensus 99 l~F~~p~----------------~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~-----ER~~l~s~R~~~ 157 (467)
T COG2211 99 LLFITPD----------------FSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQ-----ERASLTSWRMVF 157 (467)
T ss_pred HHHcCCC----------------cccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHH-----HHHHHHHHHHHH
Confidence 5554331 0012244445566678899999999999999999877654 899999999999
Q ss_pred HHHHHHHHHHHHHHhhcc-------ccchhhhhHHHHHHHHH
Q 021653 185 MGAAILVAVTVLVYIQDN-------IGWGWGLGIPTFAMFLS 219 (309)
Q Consensus 185 ~~iG~~l~~~~~~~i~~~-------~gw~~~f~i~~~~~~~~ 219 (309)
.++|.++...+...+... .||+...++.+++..+.
T Consensus 158 ~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~ 199 (467)
T COG2211 158 ASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVIL 199 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHH
Confidence 999988876665555432 35555544444444333
No 197
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.83 E-value=6.6e-07 Score=85.32 Aligned_cols=190 Identities=12% Similarity=0.061 Sum_probs=121.6
Q ss_pred ccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHH
Q 021653 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (309)
Q Consensus 21 ~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~ 100 (309)
.+.....+...+++.+.-........+.+-.+-|++..++............+..+++.++-||+ |||+.+++++.++.
T Consensus 268 R~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~~~ 346 (485)
T KOG0569|consen 268 RRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSLMA 346 (485)
T ss_pred hHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHH
Confidence 34455555666666665432333333444457799999999999999999999999999999996 99999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcc-hhhhhhhhhcccCCCChhhhhhhhHHHH
Q 021653 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGI-RPCVVAFGADQFDETDPKQATKTWKYFN 179 (309)
Q Consensus 101 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~-~~~~~~~~ad~~~~~~~~~~~~r~~~~~ 179 (309)
+..+++.....+... ....-.+..+++.++..++.+.- -|...-+.+|.+|.. .|..+.+
T Consensus 347 ~~~~~~~~~~~l~~~-------------~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~------~R~aa~s 407 (485)
T KOG0569|consen 347 VALLLMSIALFLSNS-------------FGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQS------ARSAAQS 407 (485)
T ss_pred HHHHHHHHHHHHHHH-------------hhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCcc------chHHHHH
Confidence 888877765522110 00000111223333333222222 345566779999988 5888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHhCccee
Q 021653 180 WYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYR 231 (309)
Q Consensus 180 ~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~ 231 (309)
+-.....+..++.......+.+..|= ..|.+..+..++..+..+...|..+
T Consensus 408 ~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 408 VATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETK 458 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccC
Confidence 77777667777666666777776664 4455555555555555555555543
No 198
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.82 E-value=3.6e-07 Score=86.30 Aligned_cols=158 Identities=11% Similarity=-0.056 Sum_probs=110.2
Q ss_pred HHHHHHHHHHhhHHHHHHHhHHh-cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Q 021653 30 NEVCEKLAVVGFNTNMISYLTTQ-LHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTI 108 (309)
Q Consensus 30 ~~~~~~~~~~~~~~~l~~yl~~~-~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~ 108 (309)
..++......++.++++.|+.+. .+.+...++...+.+..+..++.+++|+++||+ ++|+.+.+..++..+..++...
T Consensus 240 ~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~~~ll~~~ 318 (410)
T TIGR00885 240 AQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMALCLGSIF 318 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333345567788888643 255555566667777788899999999999996 9999988887777766666655
Q ss_pred HhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHH
Q 021653 109 SAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAA 188 (309)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG 188 (309)
.. ... ......+.|+..+.++|.+.....+..+++. .........+ .+|
T Consensus 319 ~~----------------------~~~-~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~-------~~~s~~l~~~-~~G 367 (410)
T TIGR00885 319 AG----------------------GHV-GLYCLTLCSAFMSLMFPTIYGIALKGLGQDT-------KYGAAGLVMA-IIG 367 (410)
T ss_pred cC----------------------ChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-------hhhHHHHHHH-Hhc
Confidence 33 211 2455677788888999999999999998652 2222222223 389
Q ss_pred HHHHHHHHHHhhccc------cchhhhhHHHHHHHHH
Q 021653 189 ILVAVTVLVYIQDNI------GWGWGLGIPTFAMFLS 219 (309)
Q Consensus 189 ~~l~~~~~~~i~~~~------gw~~~f~i~~~~~~~~ 219 (309)
+.+.|.+.|++.|.. +.+.+|.++.++.+..
T Consensus 368 ga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 404 (410)
T TIGR00885 368 GGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAVI 404 (410)
T ss_pred cchHHHHHHHHHHHhcccccCccchHHHHHHHHHHHH
Confidence 999999999999853 4778888877665443
No 199
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.81 E-value=1.1e-07 Score=90.07 Aligned_cols=190 Identities=15% Similarity=0.126 Sum_probs=138.5
Q ss_pred ccccCCCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHH-hcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccch-HHH
Q 021653 14 VKRQKGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTT-QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGR-FWT 91 (309)
Q Consensus 14 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~-~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR-~~~ 91 (309)
.+..+.+||.+++..++.++..+.++-....+-.|+++ +.+-+.+-.|++++...++..++.+..|+.+.|. |+ |+-
T Consensus 26 ~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~P 104 (488)
T KOG2325|consen 26 LDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKKP 104 (488)
T ss_pred ccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcccC
Confidence 34557899999999999999888776666667788864 4667777889999999999999999999999996 75 777
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhh
Q 021653 92 ITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQA 171 (309)
Q Consensus 92 i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~ 171 (309)
++.|.++.++|.++-......|. ...++++++|++.|+|.|.. +..-.|+++....+
T Consensus 105 li~s~ii~~~g~llY~~l~~~~~-----------------~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~----- 161 (488)
T KOG2325|consen 105 LIVSFLIAIIGNLLYLALAYVPN-----------------GVKYLMLVARILTGVGVGNF-AVLRAYIADASTVE----- 161 (488)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-----------------chHHHHHHHHHHcCcCcccH-HHHHHHHHhccCcc-----
Confidence 88899999999998844443332 26788999999999998765 56678888876655
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHH----hhcc------c---cchhhhhHHHHHHHHHHHHHHHhCc
Q 021653 172 TKTWKYFNWYYFVMGAAILVAVTVLVY----IQDN------I---GWGWGLGIPTFAMFLSIIAFLIGYP 228 (309)
Q Consensus 172 ~~r~~~~~~~~~~~~iG~~l~~~~~~~----i~~~------~---gw~~~f~i~~~~~~~~~~~~~~~~~ 228 (309)
.|.++++....+..+|..+||.+... .++. . .+..+-|+.+++.++.++++.+..+
T Consensus 162 -dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~ 230 (488)
T KOG2325|consen 162 -DRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFK 230 (488)
T ss_pred -chHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhhee
Confidence 47777776666666666666665332 2221 1 1334556677766666655554433
No 200
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.81 E-value=4.8e-07 Score=85.56 Aligned_cols=161 Identities=19% Similarity=0.205 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g 102 (309)
....+++..++...++.-..+.++.|.+..++.+................++.++...+++|+ |||+++.++.++.+++
T Consensus 237 p~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i~ 315 (467)
T COG2211 237 PLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAVG 315 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHHH
Confidence 334444444444444444444556666667777777777777777777777789999999996 9999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChh-hhhhhhHHHHHH
Q 021653 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPK-QATKTWKYFNWY 181 (309)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~-~~~~r~~~~~~~ 181 (309)
.+++.+.. ..+.+++++..++.++|.+...+...++++|..+-.+-+ ++++-|..++.+
T Consensus 316 ~~~~~f~~--------------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~ 375 (467)
T COG2211 316 YLLLYFTP--------------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGM 375 (467)
T ss_pred HHHHHhhc--------------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHH
Confidence 99888765 226788888889999999999999999999988754321 123457777777
Q ss_pred HHHHHHHHHHHHHHHHHhhcccc
Q 021653 182 YFVMGAAILVAVTVLVYIQDNIG 204 (309)
Q Consensus 182 ~~~~~iG~~l~~~~~~~i~~~~g 204 (309)
.+..-+|..++..+.+++-+..|
T Consensus 376 tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 376 TFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC
Confidence 77888888877766666544333
No 201
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.81 E-value=6.3e-08 Score=89.11 Aligned_cols=139 Identities=13% Similarity=0.082 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Q 021653 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (309)
Q Consensus 24 ~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~ 103 (309)
.+.+....++.....+.+..+++.|+++.+|++..+++.+.+...+...++.+++|+++||+ |||+.+..+..+...+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 305 (366)
T TIGR00886 227 TWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMGA 305 (366)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHHH
Confidence 33444444444555667778899999999999999999888888888999999999999996 99988887776666665
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHH
Q 021653 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (309)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~ 183 (309)
.++..... ++.+...+.+..++.+++.|...+...++.+|.+|. .+|+..+..+.
T Consensus 306 ~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~g~~~g~~~~ 360 (366)
T TIGR00886 306 FLVVLGLV------------------SPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRR-------ATGAVSGLVGA 360 (366)
T ss_pred HHHHhcCC------------------CcchHHHHHHHHHHHHHHhccccchhhhcchhhchh-------hcccHHHHHHH
Confidence 55554320 000344445555556666666666677777888774 58888888776
Q ss_pred HHHHH
Q 021653 184 VMGAA 188 (309)
Q Consensus 184 ~~~iG 188 (309)
..++|
T Consensus 361 ~~~~g 365 (366)
T TIGR00886 361 IGNLG 365 (366)
T ss_pred hccCC
Confidence 66654
No 202
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.80 E-value=1.4e-06 Score=81.30 Aligned_cols=138 Identities=9% Similarity=-0.040 Sum_probs=95.3
Q ss_pred HHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 021653 42 NTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCE 121 (309)
Q Consensus 42 ~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~ 121 (309)
....+.|+++.+|+++.+.+........+..++.++.+++.||+ ||+... +.....++.++.......
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~--------- 294 (394)
T PRK11652 227 EACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQ--SVICCLLAGLLMWIPGWF--------- 294 (394)
T ss_pred HHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHHHh---------
Confidence 34456788878999999988888777778888888888888886 743322 222233332222221100
Q ss_pred CccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 021653 122 GEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD 201 (309)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~ 201 (309)
...+.+.+.++..+.++|.+...+....+..|.+|+ .++...+.++...++|+.+++.+.+.+..
T Consensus 295 --------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 295 --------GVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPY-------LAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred --------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-------cchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 001345566777888999999889999988898874 46778888888889999999998888766
Q ss_pred cccch
Q 021653 202 NIGWG 206 (309)
Q Consensus 202 ~~gw~ 206 (309)
...+.
T Consensus 360 ~~~~~ 364 (394)
T PRK11652 360 TGQFS 364 (394)
T ss_pred CchHH
Confidence 54343
No 203
>PRK11462 putative transporter; Provisional
Probab=98.75 E-value=1.6e-06 Score=83.16 Aligned_cols=154 Identities=13% Similarity=0.087 Sum_probs=91.0
Q ss_pred HHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH
Q 021653 30 NEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTIS 109 (309)
Q Consensus 30 ~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~ 109 (309)
..++..............|.+..++.. ...+.+...+.+...++.+++++++||+ |||+.+..+..+..+..++..+.
T Consensus 236 ~~~~~~~~~~~~~~~~~y~~~y~~g~~-~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~~~~~~~~ 313 (460)
T PRK11462 236 LTIFNILAVCVRGGAMMYYVTWILGTP-EVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVISLAMFFV 313 (460)
T ss_pred HHHHHHHHHHHHHhHhhhhhhhhcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHh
Confidence 333333333333334444444444433 3344556667777888899999999996 99988775555444433333222
Q ss_pred hhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhh-hhhhhHHHHHHHHHHHHH
Q 021653 110 AILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQ-ATKTWKYFNWYYFVMGAA 188 (309)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~-~~~r~~~~~~~~~~~~iG 188 (309)
. ..+...+++..++.|++.+...+...++++|..+.++-+. +++-|..++.+.+...+|
T Consensus 314 ~--------------------~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg 373 (460)
T PRK11462 314 P--------------------MQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLG 373 (460)
T ss_pred c--------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHH
Confidence 1 0123334444566677777777777788888877442111 223455567777788888
Q ss_pred HHHHHHHHHHhhccccc
Q 021653 189 ILVAVTVLVYIQDNIGW 205 (309)
Q Consensus 189 ~~l~~~~~~~i~~~~gw 205 (309)
..+++.+.+.+.+..|+
T Consensus 374 ~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 374 LAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 88888877766544444
No 204
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.73 E-value=3.1e-07 Score=87.77 Aligned_cols=178 Identities=13% Similarity=0.046 Sum_probs=119.2
Q ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccc-------hHHHHHH
Q 021653 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAG-------RFWTITI 94 (309)
Q Consensus 22 ~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~G-------R~~~i~i 94 (309)
+.+|.+++..++.+++++.+..++|.|+.+.+|++..+.|...++..+...+..+++|.++|+... +||.+-
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn- 336 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFN- 336 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHH-
Confidence 467888899999999999999999999999999999999999999999999999999999999622 112111
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhh
Q 021653 95 ASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKT 174 (309)
Q Consensus 95 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r 174 (309)
+......+..+..+ .+.+.. +.......+.++..+.|+..++...+ ..|..|. .-
T Consensus 337 ~i~~~~~ai~l~~l-~~~~~~-------------~~~~a~~~l~~~~~~~g~~~~Gf~~~----~~~~apq-------~a 391 (466)
T KOG2532|consen 337 TIAFGGPAVFLLVL-AFTSDE-------------HRLLAVILLTIAIGLSGFNISGFYKN----HQDIAPQ-------HA 391 (466)
T ss_pred hHHHHHHHHHHHee-eecCCC-------------cchHHHHHHHHHHHHcccchhhhHhh----hhhccch-------HH
Confidence 11111112122221 111110 00012222222333333333333222 2233454 47
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcc---ccchhhhhHHHHHHHHHHHHHHH
Q 021653 175 WKYFNWYYFVMGAAILVAVTVLVYIQDN---IGWGWGLGIPTFAMFLSIIAFLI 225 (309)
Q Consensus 175 ~~~~~~~~~~~~iG~~l~~~~~~~i~~~---~gw~~~f~i~~~~~~~~~~~~~~ 225 (309)
+..++..++..++.++++|.+.+.+..+ -.|+..|++.+++.+++-+++..
T Consensus 392 ~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~ 445 (466)
T KOG2532|consen 392 GFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLF 445 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeE
Confidence 8888899999999999999999887732 37999999999988887765543
No 205
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.70 E-value=1.8e-06 Score=80.79 Aligned_cols=178 Identities=13% Similarity=0.105 Sum_probs=134.7
Q ss_pred ccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcC---CCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHH
Q 021653 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLH---MPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI 97 (309)
Q Consensus 21 ~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~---~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~ 97 (309)
-|..|.+++........++..-.-.+.|++..++ .++...+.+.+.-...-.+.-.+..++-+|+ |.|+.++++..
T Consensus 219 ~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag~ 297 (412)
T PF01306_consen 219 MRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAGV 297 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHHH
Confidence 3556665555555555555555557888876554 3445566677777777778888899999995 99999999998
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHH
Q 021653 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (309)
Q Consensus 98 l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 177 (309)
+..+=.+.+++++ +++.+.+...+.++-.+.......-|+++.+|++ ..++.
T Consensus 298 i~~iRi~~~~~~~----------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~r------lsAt~ 349 (412)
T PF01306_consen 298 IMAIRIIGSGFAT----------------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKR------LSATL 349 (412)
T ss_dssp HHHHHHHHHHT------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GG------GHHHH
T ss_pred HHHHHHHHHhhhc----------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh------HHHHH
Confidence 8888777777766 7888889999999999999999999999999976 45666
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHhC
Q 021653 178 FNW-YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGY 227 (309)
Q Consensus 178 ~~~-~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~ 227 (309)
... ++.+..+|..+.+.+.|++.|+.|.+..|++.+.+++...++..+..
T Consensus 350 y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l 400 (412)
T PF01306_consen 350 YLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTL 400 (412)
T ss_dssp HHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeee
Confidence 665 46788899999999999999999999999888887766655544433
No 206
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.70 E-value=7.9e-07 Score=85.58 Aligned_cols=182 Identities=9% Similarity=0.025 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHH----HHHHHHHHHHHHHhHHHHHH----HHHHhccchHHH--HHHHHH
Q 021653 28 FSNEVCEKLAVVGFNTNMISYLTTQLHMPLTK----AANTLTNFGGTGSLTPLIGA----FVADAYAGRFWT--ITIASI 97 (309)
Q Consensus 28 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~----~~~~~~~~~~~~~~~~l~~G----~laD~~~GR~~~--i~i~~~ 97 (309)
++...+....+.-..+.++.|..+..+.+... .+.+.+.-.+...+.+++.. .+.||..+.+.. +.+|++
T Consensus 278 ~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~ 357 (475)
T TIGR00924 278 FLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGML 357 (475)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHH
Confidence 33334444455555566777776654433211 44445544444444544433 445542133333 367888
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHH
Q 021653 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (309)
Q Consensus 98 l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 177 (309)
+..++.+.+.+...... .+...+.+.+.+..++.++|.....|....+.++..|++ .||+.
T Consensus 358 l~~~~~~~~~~~~~~~~-------------~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~------~~g~~ 418 (475)
T TIGR00924 358 FCGASFLTFAASIWFAD-------------AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQR------LMGQM 418 (475)
T ss_pred HHHHHHHHHHHHHhhcC-------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHH------HHHHH
Confidence 88888777765431100 011237788889999999999999999999999999987 79999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHhCc
Q 021653 178 FNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (309)
Q Consensus 178 ~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~~ 228 (309)
.+.++....+|..++..+.....+..+|...|...+++.++..++++...|
T Consensus 419 ~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 419 LGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999888877766667887777777766665555555444
No 207
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.67 E-value=5.8e-07 Score=81.70 Aligned_cols=170 Identities=10% Similarity=0.060 Sum_probs=110.5
Q ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHhHHh--cCC-----------------CHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 021653 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQ--LHM-----------------PLTKAANTLTNFGGTGSLTPLIGAFVA 82 (309)
Q Consensus 22 ~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~--~~~-----------------s~~~~~~~~~~~~~~~~~~~l~~G~la 82 (309)
|.-+.++..-+..++.+|+..-.....++.. .|. +...--.=..+....-+-|.++.+++-
T Consensus 326 kttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iv 405 (528)
T KOG0253|consen 326 KTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIV 405 (528)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHH
Confidence 4445566677778889988765443333321 111 111111112334556678889999999
Q ss_pred HhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcc
Q 021653 83 DAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQ 162 (309)
Q Consensus 83 D~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~ 162 (309)
||+ |||+++..+.+++.+..+++.... + .+....+++.+|+++..+. .+++.|..|.
T Consensus 406 erl-GRKkTMal~l~~f~iflfll~~c~-----------------~-rn~~tvllf~arafisg~f----qvaYvYtPEV 462 (528)
T KOG0253|consen 406 ERL-GRKKTMALSLILFGIFLFLLTTCK-----------------T-RNAYTVLLFTARAFISGAF----QVAYVYTPEV 462 (528)
T ss_pred HHh-cchhHHHHHHHHHHHHHHHHHHhc-----------------C-cchhHHHHHHHHHHHhchh----eEEEEecCcc
Confidence 995 999999999998888777766543 1 1123455667777765444 4567888999
Q ss_pred cCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHH
Q 021653 163 FDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (309)
Q Consensus 163 ~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~ 222 (309)
+|+. .|+...+.-.-..-+|+++.|.++ +....+-..+..+...+.+++.+.
T Consensus 463 yPTa------vRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIa 514 (528)
T KOG0253|consen 463 YPTA------VRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIA 514 (528)
T ss_pred cchh------hhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHH
Confidence 9998 699999888888999999999888 332333334555555555555443
No 208
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.67 E-value=2.2e-06 Score=75.10 Aligned_cols=127 Identities=11% Similarity=0.086 Sum_probs=95.7
Q ss_pred HHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcc
Q 021653 45 MISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQ 124 (309)
Q Consensus 45 l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 124 (309)
....+.+.+|+|..+...+...-.++.+++ ++.|.+.|++ |.+.++.+|.+...+|+.++..+..-.
T Consensus 24 yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~-gp~~~l~iG~~~~~~GY~~~~l~~~~~----------- 90 (250)
T PF06813_consen 24 YSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF-GPWVVLLIGAVLGFVGYGLLWLAVSGR----------- 90 (250)
T ss_pred hhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCc-----------
Confidence 345677899999999999999999999875 8899999996 999999999999999999888765100
Q ss_pred ccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 021653 125 VCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTV 195 (309)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~ 195 (309)
-.....+.+.+...+.+.|.+...+.......+.||.+ ||...+..-....+++.+=..+
T Consensus 91 ----i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~-------RG~vvgilk~~~GLSaai~t~i 150 (250)
T PF06813_consen 91 ----IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRS-------RGTVVGILKGFFGLSAAIFTQI 150 (250)
T ss_pred ----cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccc-------cCceehhhhHHHHhHHHHHHHH
Confidence 01125566666666777777666666666667899964 8888888766666666553333
No 209
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.63 E-value=6.6e-06 Score=77.44 Aligned_cols=176 Identities=12% Similarity=0.050 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Q 021653 26 FIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMIC 105 (309)
Q Consensus 26 ~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~ 105 (309)
..++..++.....-....+...|+++.-+.+....+.+.+...+.-.+.-.+.+++-.|+ |-++.+.++.+.+++=..+
T Consensus 211 ~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR~~l 289 (400)
T PF03825_consen 211 VFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVRWLL 289 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHH
Confidence 333444444544444556778888754447777767666666666667777889999996 9999999999888877676
Q ss_pred HHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHH-H
Q 021653 106 LTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF-V 184 (309)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~-~ 184 (309)
.+.... | ..........+..+.|+..|........|+.+..|++ .|++.-+++.. .
T Consensus 290 ~a~~~~-~----------------~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~------~~at~Q~l~~~~~ 346 (400)
T PF03825_consen 290 YAYFSD-P----------------WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPE------LRATAQGLYSALS 346 (400)
T ss_pred HHHhcC-C----------------cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcc------chHHHHHHHHHHH
Confidence 666530 0 0001222334456789999999999999999999988 68888888776 4
Q ss_pred HHHHHHHHHHHHHHhhccccch------hhhhHHHHHHHHHHHHHHH
Q 021653 185 MGAAILVAVTVLVYIQDNIGWG------WGLGIPTFAMFLSIIAFLI 225 (309)
Q Consensus 185 ~~iG~~l~~~~~~~i~~~~gw~------~~f~i~~~~~~~~~~~~~~ 225 (309)
..+|..+|..++|++.+.+|-+ ..+.+.+++.++..++++.
T Consensus 347 ~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~ 393 (400)
T PF03825_consen 347 FGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVI 393 (400)
T ss_pred hhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 6789999999999999877644 3445555555555545444
No 210
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.62 E-value=1.2e-05 Score=75.60 Aligned_cols=113 Identities=15% Similarity=0.096 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Q 021653 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTI 108 (309)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~ 108 (309)
...++..+.+-....+++.|++ +.|+|..+.+.+.++..+...+++++.|+++||+..+++.+.+..++..+.......
T Consensus 9 ~~~f~~f~~~G~~~p~~~~~L~-~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~ 87 (400)
T PF03825_consen 9 LMYFLYFFAYGAFLPYLPLYLE-SRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAF 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444445677888886 578999999999999999999999999999999744667666655554444333333
Q ss_pred HhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccC
Q 021653 109 SAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFD 164 (309)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~ 164 (309)
.. +.+.+++..++..+......|...++.-+...
T Consensus 88 ~~----------------------~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~ 121 (400)
T PF03825_consen 88 SS----------------------SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG 121 (400)
T ss_pred hc----------------------cHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 32 44555555566666666666666666555544
No 211
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.62 E-value=6.9e-06 Score=77.59 Aligned_cols=170 Identities=15% Similarity=-0.021 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g 102 (309)
..+...+...+....++.....+|.++++.+|++..+.+.......++..++..+.+.+.++. ++++.+.....+..+|
T Consensus 219 ~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~ig 297 (413)
T PRK15403 219 LFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLVG 297 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHHH
Confidence 344444445555666666677788999989999999999887777777777777777765443 4444444444455555
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHH
Q 021653 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (309)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~ 182 (309)
.+++....... ..+...++++.++.++|.+...++.....-.+... .+|+..+.+.
T Consensus 298 ~~l~~~~~~~~-----------------~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~~-------~~G~a~a~~~ 353 (413)
T PRK15403 298 LALLIVGNLLW-----------------PHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNL-------PKGTVSASLN 353 (413)
T ss_pred HHHHHHHHHHc-----------------cccHHHHHHHHHHHHHHHHHHhHHHHHHHhccCCC-------CCcHHHHHHH
Confidence 55444332000 01333456777888889888887777533222221 2556666666
Q ss_pred HHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHH
Q 021653 183 FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFL 218 (309)
Q Consensus 183 ~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~ 218 (309)
.....+..+++.+.+++.+. +-..+|....++..+
T Consensus 354 ~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~ 388 (413)
T PRK15403 354 MVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGV 388 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHH
Confidence 66666777777777777654 445566555544433
No 212
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.58 E-value=7e-09 Score=100.90 Aligned_cols=184 Identities=13% Similarity=0.233 Sum_probs=3.0
Q ss_pred HHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 021653 36 LAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQL 115 (309)
Q Consensus 36 ~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~ 115 (309)
...++.......-++++|+++.++++.+.+.+.++..+..++..++++|. -|-|.+-+|+++..+|.++.++-.++..-
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~lPhf~~~~ 94 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFALPHFLSGP 94 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhccHhhcCC
Confidence 55556666666778899999999999999999999999999999999995 67778888899999999988865433111
Q ss_pred CC------CCCC---Ccccc-------------------ccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCC
Q 021653 116 RP------PPCE---GEQVC-------------------QEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETD 167 (309)
Q Consensus 116 ~~------~~~~---~~~~~-------------------~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~ 167 (309)
.. ..|. ....| +........+|+++.++.|+|....++...+|+=|..+++
T Consensus 95 y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~- 173 (539)
T PF03137_consen 95 YSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKK- 173 (539)
T ss_dssp ---------------------------------------------------------SSS--------------------
T ss_pred CccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccc-
Confidence 10 0000 00112 1111123567889999999999999999999999988876
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc---------------------ccc-chhhhhHHHHHHHHHHHHHHH
Q 021653 168 PKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD---------------------NIG-WGWGLGIPTFAMFLSIIAFLI 225 (309)
Q Consensus 168 ~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~---------------------~~g-w~~~f~i~~~~~~~~~~~~~~ 225 (309)
.-+...+.++....+|..+|..+++...+ ..| |+.+|.+.+++.++..+.+..
T Consensus 174 -----~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~ 248 (539)
T PF03137_consen 174 -----NSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFF 248 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----cCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 57788888888889999888877665321 123 888888888777665555444
Q ss_pred h
Q 021653 226 G 226 (309)
Q Consensus 226 ~ 226 (309)
.
T Consensus 249 F 249 (539)
T PF03137_consen 249 F 249 (539)
T ss_dssp -
T ss_pred C
Confidence 3
No 213
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.57 E-value=7.5e-07 Score=83.31 Aligned_cols=178 Identities=11% Similarity=0.021 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHH--H
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY--Q 100 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~--~ 100 (309)
..+......+...+++-...++++.+++++.|++..+.|.+.++..+...+.+++.|.++||+ |.||-++....+. .
T Consensus 8 ~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~~l 86 (412)
T PF01306_consen 8 NYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILLLL 86 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHHHH
Confidence 344444445555555555667889999988999999999999999999999999999999996 9666544333222 2
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHH
Q 021653 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (309)
Q Consensus 101 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 180 (309)
.|-.....-. |.+ ..-++++.++.++..+.......+. .|.+-++. +++.+-=++-
T Consensus 87 ~~pff~~v~~--pll------------------~~n~~lg~iig~i~l~~~f~~~~~~-~Ea~~er~---sr~~~feYG~ 142 (412)
T PF01306_consen 87 FGPFFIYVFG--PLL------------------QSNFWLGAIIGGIYLGLVFNAGVPL-SEAYAERV---SRRNGFEYGR 142 (412)
T ss_dssp CHHHHHHTHH--HHH------------------HTT-HHHHHHTTTTTTTTTTTHHHH-HHHHHHHH---HHHHSS-HHH
T ss_pred HHHHHHHHHH--HHH------------------HHHHHHHHHHHHHHHHHHHcccchH-HHHHHHHH---HHHhcCCcch
Confidence 2332222111 110 0113334344344444333222222 13333221 1122222333
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHh
Q 021653 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIG 226 (309)
Q Consensus 181 ~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~ 226 (309)
.-...++|..++..++|++.+. +-...||+..+..++..++.+..
T Consensus 143 ~R~wGSig~ai~s~~~G~L~~i-~p~~~fwi~s~~~~il~lll~~~ 187 (412)
T PF01306_consen 143 ARMWGSIGFAIASLLAGILFNI-NPNIIFWIASAAAIILLLLLLLL 187 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHhhHHHHHHHHHhheeeee-CccHHHHHHHHHHHHHHHHHHHc
Confidence 3345677888888888887652 33456776655544444343333
No 214
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.56 E-value=8.2e-06 Score=75.51 Aligned_cols=157 Identities=11% Similarity=0.168 Sum_probs=123.1
Q ss_pred HHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 021653 43 TNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEG 122 (309)
Q Consensus 43 ~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 122 (309)
..+-+|--+.||++..+...++..+.++..++-.+.|++..+..|++++..+++.+..++..++.++..
T Consensus 229 ~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~----------- 297 (403)
T PF03209_consen 229 VILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGP----------- 297 (403)
T ss_pred HHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHh-----------
Confidence 334577777899999999999999999999999999999987679999999999999999988888772
Q ss_pred ccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc-
Q 021653 123 EQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD- 201 (309)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~- 201 (309)
..+.+.|..+.++.|+|.|.........+-|...++ +.|.+.+.+-....+...++..+++.+.|
T Consensus 298 --------~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~------~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~ 363 (403)
T PF03209_consen 298 --------LGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAG------RAGLFMGAWGAAQAIARGLGTFLGGALRDL 363 (403)
T ss_pred --------cccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCc------chhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 226788999999999999999888888888887766 57888888877777776666666555433
Q ss_pred ---------cccchhhhhHHHHHHHHHHHHHH
Q 021653 202 ---------NIGWGWGLGIPTFAMFLSIIAFL 224 (309)
Q Consensus 202 ---------~~gw~~~f~i~~~~~~~~~~~~~ 224 (309)
..+|...|.+-++..++++++..
T Consensus 364 ~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 364 VRALFGNSPALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred HHHhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 23456666666666665554443
No 215
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.55 E-value=1e-05 Score=70.73 Aligned_cols=140 Identities=19% Similarity=0.255 Sum_probs=103.7
Q ss_pred HhcCCCH--HHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccc
Q 021653 51 TQLHMPL--TKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQE 128 (309)
Q Consensus 51 ~~~~~s~--~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (309)
..++.+. ...+...+.+.....++.++.|.++||+ |||+.+..+.....++.++..+...
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~----------------- 91 (338)
T COG0477 30 STLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPN----------------- 91 (338)
T ss_pred HHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCcc-----------------
Confidence 4555554 4778888888888888889999999997 9998888887765556455554440
Q ss_pred ccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHH-HHHHHHHHHHHHHHHhhc--cccc
Q 021653 129 ANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF-VMGAAILVAVTVLVYIQD--NIGW 205 (309)
Q Consensus 129 ~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~-~~~iG~~l~~~~~~~i~~--~~gw 205 (309)
.....+.+.+...|++.|...+....+.+|.+|. . .+|+...+.... ...+|..+++.+.+.+.. ..+|
T Consensus 92 ---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T COG0477 92 ---VGLALLLILRLLQGLGGGGLLPVASALLSEWFPE-A----TERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGW 163 (338)
T ss_pred ---chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc-h----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 2577788888889999999999999999999996 1 157887777777 577777787766555543 3578
Q ss_pred hhhhhHHHHHH
Q 021653 206 GWGLGIPTFAM 216 (309)
Q Consensus 206 ~~~f~i~~~~~ 216 (309)
+..|.+.....
T Consensus 164 ~~~~~~~~~~~ 174 (338)
T COG0477 164 RAAFLLAALLG 174 (338)
T ss_pred HHHHHHHHHHH
Confidence 88555554443
No 216
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.44 E-value=9e-06 Score=77.38 Aligned_cols=156 Identities=15% Similarity=0.113 Sum_probs=115.0
Q ss_pred HHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhc--cc--hHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 021653 44 NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY--AG--RFWTITIASIIYQIGMICLTISAILPQLRPPP 119 (309)
Q Consensus 44 ~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~--~G--R~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~ 119 (309)
....|+.+++|+++++.....+....-.. .-++.|.++|.+ +| ||+=++++.++..++.+.+.... .
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~---~----- 81 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLP---A----- 81 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcc---c-----
Confidence 35568889999999998876666555554 457789999995 45 55556667766655555555432 1
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 021653 120 CEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI 199 (309)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i 199 (309)
...+.....+..++..+|......+.-+..+|....+.. .++...++.+....+|++++..+.|++
T Consensus 82 ----------~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~----~~g~lqS~~~~~~~~G~lv~~~l~G~l 147 (433)
T PF03092_consen 82 ----------SESSAAIAVVLLFLASFGYAFADVAADALVVELARREPE----SRGDLQSFVWGVRSVGSLVGSLLSGPL 147 (433)
T ss_pred ----------ccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCc----hhHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 011334445566778899999999999999999876642 478888899999999999999999999
Q ss_pred hccccchhhhhHHHHHHHHHHHH
Q 021653 200 QDNIGWGWGLGIPTFAMFLSIIA 222 (309)
Q Consensus 200 ~~~~gw~~~f~i~~~~~~~~~~~ 222 (309)
.+..+++..|.+.+++..+..+.
T Consensus 148 ~~~~~~~~~f~i~~~~~~l~~~~ 170 (433)
T PF03092_consen 148 LDSFGPQGVFLISAALPLLMLIV 170 (433)
T ss_pred hhcCCCeEEehHHHHHHHHHHHH
Confidence 99999999998887766555433
No 217
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.42 E-value=1.2e-05 Score=76.80 Aligned_cols=171 Identities=18% Similarity=0.132 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHHHhhH---HHHHHHhHHhcCCCHHH-HHHHHHH----HHHHHHhHHHHHHHHHHhccchHHHHHHHHHH
Q 021653 27 IFSNEVCEKLAVVGFN---TNMISYLTTQLHMPLTK-AANTLTN----FGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (309)
Q Consensus 27 i~~~~~~~~~~~~~~~---~~l~~yl~~~~~~s~~~-~~~~~~~----~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l 98 (309)
+....++..++++... .+...+.....+.+..+ ....... ......+.+++-|.++|+| |||..+.+..+.
T Consensus 23 ~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~ 101 (463)
T KOG2816|consen 23 LEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLLLPLFG 101 (463)
T ss_pred HHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHHHHHHH
Confidence 3344444555544444 44555555444433322 2222222 2466678889999999997 999999999888
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHH
Q 021653 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (309)
Q Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~ 178 (309)
.++..+.+.+.. +.+++ ..-..-|.+...+...++++|....+ .|...+
T Consensus 102 ~~l~~~~~~~~~------------------------~~~~~-~~~l~g~~~~~~s~~~a~vadis~~~------~R~~~~ 150 (463)
T KOG2816|consen 102 TILPALCLLFQG------------------------YWFFL-LLGLSGGFSAIFSVGFAYVADISSEE------ERSSSI 150 (463)
T ss_pred HHHhHHHHHHHH------------------------HHHhh-hcccccchhhhhhhhhhheeeccchh------HHHHHH
Confidence 888777766543 22222 11112234456678888899988876 799999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHhCcc
Q 021653 179 NWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPL 229 (309)
Q Consensus 179 ~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~ 229 (309)
+..+.....+..++|..++++....|....|.+.++..+++.+......|+
T Consensus 151 gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~E 201 (463)
T KOG2816|consen 151 GLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPE 201 (463)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccc
Confidence 998888888999999999999998999999999998888877665555443
No 218
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.42 E-value=1.3e-05 Score=73.92 Aligned_cols=140 Identities=14% Similarity=0.121 Sum_probs=108.0
Q ss_pred hhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 021653 40 GFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPP 119 (309)
Q Consensus 40 ~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~ 119 (309)
.+.++++.|+.+..+++..+++..++.+.++..+|..++-++-.|+ ...|.+.+.+++.++-++...++.
T Consensus 254 a~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~ill~~~~~l~~--------- 323 (422)
T COG0738 254 AIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAILLLLAVALIG--------- 323 (422)
T ss_pred HHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHhc---------
Confidence 3567889999888999999999999999999999999999999885 888888877665554444444433
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 021653 120 CEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI 199 (309)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i 199 (309)
+ ..-..+.+++|+..+.++|++.+...+..|++. +.++.. -....+|+.+.|.+.|++
T Consensus 324 -------------g-~v~~~~l~~ig~F~simfPTIfslal~~l~~~t-----s~~s~~---l~maivGGAiiP~l~G~i 381 (422)
T COG0738 324 -------------G-VVALYALFLIGLFNSIMFPTIFSLALKNLGEHT-----SVGSGL---LVMAIVGGAIIPPLQGVI 381 (422)
T ss_pred -------------C-hHHHHHHHHHHHHhHHHHHHHHHHHHhccCccc-----ccccee---eeeheecchHHHHHHHHH
Confidence 3 223345678899999999999999999999765 333332 224567888999999999
Q ss_pred hccccchhhhhH
Q 021653 200 QDNIGWGWGLGI 211 (309)
Q Consensus 200 ~~~~gw~~~f~i 211 (309)
.|..|-...+.+
T Consensus 382 ~d~~g~~~~~~~ 393 (422)
T COG0738 382 ADMFGIQLTFLI 393 (422)
T ss_pred HHhhhhHHHHHH
Confidence 999988777663
No 219
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.41 E-value=1.9e-05 Score=73.65 Aligned_cols=134 Identities=13% Similarity=0.031 Sum_probs=95.7
Q ss_pred HHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcc
Q 021653 45 MISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQ 124 (309)
Q Consensus 45 l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 124 (309)
+..|..+-++ +...+.+..-+|+..+....+.+-|+.|++ |=|.+.++++.+.++|..+-..+. .|.+.+.
T Consensus 67 i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~iGa~Ir~iss-~p~v~~~------ 137 (480)
T KOG2563|consen 67 INNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGIGAWIRLISS-LPFVPPL------ 137 (480)
T ss_pred HHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHHHHHHhhhcc-Ccccccc------
Confidence 3455666667 666777788889999999999999999996 999999999999999999888776 4433221
Q ss_pred ccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 021653 125 VCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQ 200 (309)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~ 200 (309)
-.....+.|-.+.+...-.+...-+-..+-+|+++ +|..+...-.++..+|..++.++...+.
T Consensus 138 -------f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~------qra~A~~~~v~~n~LGvavg~llppilV 200 (480)
T KOG2563|consen 138 -------FRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPD------QRAIATVLGVMGNPLGVAVGFLLPPILV 200 (480)
T ss_pred -------chhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcc------hhhhhhhHHHhcchHHHHHHhhccceec
Confidence 01125556666666665555444445556778877 6888777766677777777766655443
No 220
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.37 E-value=1.3e-05 Score=77.48 Aligned_cols=146 Identities=12% Similarity=0.071 Sum_probs=97.6
Q ss_pred HHHHHHhhHHHHHHHhHHhcCCCHH----HHHHHHHHHHHHHHhHHHHHHHHHHhccchHHH-------HHHHHHHHHHH
Q 021653 34 EKLAVVGFNTNMISYLTTQLHMPLT----KAANTLTNFGGTGSLTPLIGAFVADAYAGRFWT-------ITIASIIYQIG 102 (309)
Q Consensus 34 ~~~~~~~~~~~l~~yl~~~~~~s~~----~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~-------i~i~~~l~~~g 102 (309)
....+......++.|.++..+.+.. ..+.+.+...+...+..++.|++.||+ |||+. +.+|.++..++
T Consensus 281 f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~~l~~~~ 359 (489)
T PRK10207 281 FYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGMFLCSLG 359 (489)
T ss_pred HHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHHHHHHHH
Confidence 3334444446677777643332211 123344444455667777889999996 98873 66777777777
Q ss_pred HHHHHHHhh-cCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHH
Q 021653 103 MICLTISAI-LPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (309)
Q Consensus 103 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~ 181 (309)
.+.++.... ... .....+.+.+....++.|+|.++..++...+..+..|++ .++...+.+
T Consensus 360 ~~~~~~~~~~~~~-------------~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~------~~g~~~g~~ 420 (489)
T PRK10207 360 FLTAAAAGMWFAD-------------AQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQH------LMGFILGMW 420 (489)
T ss_pred HHHHHHHHHhhcC-------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHH------HHHHHHHHH
Confidence 655443220 000 001124566667778999999999999999999999987 799999999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 021653 182 YFVMGAAILVAVTVLVYI 199 (309)
Q Consensus 182 ~~~~~iG~~l~~~~~~~i 199 (309)
++..++|+.++..+....
T Consensus 421 ~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 421 FLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999987776544
No 221
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.37 E-value=4.6e-06 Score=80.26 Aligned_cols=165 Identities=16% Similarity=0.118 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhc---cchHHHHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY---AGRFWTITIASIIY 99 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~---~GR~~~i~i~~~l~ 99 (309)
.+|...+..++.....|++..++|.|+++..|++..++..+...+.++..++.+++|+++||. +.+|.....+..++
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~ 353 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLY 353 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 455566677778888889999999999986779999999999999999999999999999993 26666655555444
Q ss_pred H-HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHH
Q 021653 100 Q-IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (309)
Q Consensus 100 ~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~ 178 (309)
. +|.+.+.... .....+.+.+....+.+...++......+....+. ++-+..
T Consensus 354 ~~~g~~~l~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~-----k~~~~~ 406 (495)
T KOG2533|consen 354 AIIGAISLLAAA----------------------VLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNT-----KALTTV 406 (495)
T ss_pred HHHHHHHHHhhc----------------------cchHHhHHHHhcchhhHHHHHHHHhhccccccchH-----HhHHHH
Confidence 3 3334333332 22223333333444444555566666666665543 455555
Q ss_pred HHHHHHHHHHHHHHH-HHHHHhhccccchhhhhHHHH
Q 021653 179 NWYYFVMGAAILVAV-TVLVYIQDNIGWGWGLGIPTF 214 (309)
Q Consensus 179 ~~~~~~~~iG~~l~~-~~~~~i~~~~gw~~~f~i~~~ 214 (309)
+.+..+.+.++.+++ +..+.....++|...|.....
T Consensus 407 ~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~~ 443 (495)
T KOG2533|consen 407 SAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLVA 443 (495)
T ss_pred hhhhcchhHHHHhhhhhcccccCcchhhhhHHHHHHH
Confidence 555555555555444 445556666788888844333
No 222
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.35 E-value=2.8e-05 Score=75.43 Aligned_cols=176 Identities=14% Similarity=0.035 Sum_probs=108.6
Q ss_pred HHHHHHHhhHHHHHHHhHH--hcCCCHH------HHHHHHHHHHHHHHhHHHHH----HHHHHhccchHHHHHHHHHHHH
Q 021653 33 CEKLAVVGFNTNMISYLTT--QLHMPLT------KAANTLTNFGGTGSLTPLIG----AFVADAYAGRFWTITIASIIYQ 100 (309)
Q Consensus 33 ~~~~~~~~~~~~l~~yl~~--~~~~s~~------~~~~~~~~~~~~~~~~~l~~----G~laD~~~GR~~~i~i~~~l~~ 100 (309)
+....+|.+...++.++.. ..+.+.. ..+++.+...+...++.++. +++.||+ +..+.+.+|.++..
T Consensus 283 ~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~~l~~ 361 (500)
T PRK09584 283 LEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGMVLCS 361 (500)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHHHHHH
Confidence 4444555555555555442 1111111 13334444444444454555 5555553 66688888999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHH
Q 021653 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (309)
Q Consensus 101 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 180 (309)
+|.+.+......+. .....+.+.+....++.++|.++..|....++.+..|++ .||+.++.
T Consensus 362 l~f~~l~~~~~~~~-------------~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~------~rg~~~g~ 422 (500)
T PRK09584 362 GAFLVLPLGAKFAN-------------DAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQR------LMGFIMGS 422 (500)
T ss_pred HHHHHHHHHHHhcC-------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHH------HHHHHHHH
Confidence 99888777652111 001235667788889999999999999999999999988 79999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhc----------cccchhhhhHHHHHHHHHHHHHHHhCc
Q 021653 181 YYFVMGAAILVAVTVLVYIQD----------NIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (309)
Q Consensus 181 ~~~~~~iG~~l~~~~~~~i~~----------~~gw~~~f~i~~~~~~~~~~~~~~~~~ 228 (309)
++++..+|..++..+.+.... ..+....|...+++.++..++++...|
T Consensus 423 ~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~ 480 (500)
T PRK09584 423 WFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAP 480 (500)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988888888777666543211 112456666666554433333333333
No 223
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.34 E-value=5.4e-05 Score=70.19 Aligned_cols=141 Identities=16% Similarity=0.064 Sum_probs=98.2
Q ss_pred HHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccc-----hH-HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCc
Q 021653 50 TTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAG-----RF-WTITIASIIYQIGMICLTISAILPQLRPPPCEGE 123 (309)
Q Consensus 50 ~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~G-----R~-~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 123 (309)
..+++++....+..++....... ..+..|+.||+. + || +-++.|.++...|..+...+...-.- ..
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~------~~ 78 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAE------SG 78 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcc------cc
Confidence 45788888888888877776665 578899999997 6 55 44556666777766666655422110 00
Q ss_pred cccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 021653 124 QVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNI 203 (309)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~ 203 (309)
+....+.........+...+.|+|.+...++..++.+|..|++ +|++..+..|...-+|..++..+.+.+-+.+
T Consensus 79 ~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~------~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~ 152 (403)
T PF03209_consen 79 QQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEE------RRPRVVAIVWVMLIVGIIVSAIVFGRLLDPF 152 (403)
T ss_pred cccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHh------hhhhhHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 0001111112233345556779999999999999999999988 7999999999999999999999888766655
Q ss_pred c
Q 021653 204 G 204 (309)
Q Consensus 204 g 204 (309)
+
T Consensus 153 s 153 (403)
T PF03209_consen 153 S 153 (403)
T ss_pred C
Confidence 4
No 224
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.23 E-value=1.9e-05 Score=78.30 Aligned_cols=200 Identities=12% Similarity=0.196 Sum_probs=143.1
Q ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHH
Q 021653 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (309)
Q Consensus 22 ~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~ 101 (309)
+.++.++....+......+......+-+.+.++++..+.+.+.+.+.++..+...+..+.+-|. =|-+.+-+|++++.+
T Consensus 96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMGL 174 (735)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHHH
Confidence 3444444444444433336666667778889999999999999999999999999999999995 677788889999999
Q ss_pred HHHHHHHHhhcCCC-------------CC-------------CCCC-Cccccc--cccch-hHHHHHHHHHHHHHhhhcc
Q 021653 102 GMICLTISAILPQL-------------RP-------------PPCE-GEQVCQ--EANKG-QVAILYVSLLLAALGSGGI 151 (309)
Q Consensus 102 g~~~~~~~~~~~~~-------------~~-------------~~~~-~~~~~~--~~~~~-~~~~~~~~~~l~gig~g~~ 151 (309)
|.++.++-.++..- .+ ..|. ..+.|. ..++. -..+|+++.++.|+|....
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626|consen 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCC
Confidence 99988865322100 00 1111 112222 12222 3446788999999999999
Q ss_pred hhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcc------------------c-cchhhhhHH
Q 021653 152 RPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN------------------I-GWGWGLGIP 212 (309)
Q Consensus 152 ~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~------------------~-gw~~~f~i~ 212 (309)
++...+|+=|-..++ .....++..+....+|.++|.++++++... . .|+.+|++.
T Consensus 255 ~tlGisYiDDnvk~~------~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~ 328 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKK------NSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLIC 328 (735)
T ss_pred ccCCCcccccccccc------CCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHH
Confidence 999999987766655 678888999999999999999888875321 1 388999999
Q ss_pred HHHHHHHHHHHHHhCc
Q 021653 213 TFAMFLSIIAFLIGYP 228 (309)
Q Consensus 213 ~~~~~~~~~~~~~~~~ 228 (309)
+.+.++..+.+++..+
T Consensus 329 g~~~~~~a~p~f~fPk 344 (735)
T KOG3626|consen 329 GALLLFSAVPLFFFPK 344 (735)
T ss_pred HHHHHHHHHHHHhCcc
Confidence 8888877766655443
No 225
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.22 E-value=6.3e-06 Score=79.21 Aligned_cols=146 Identities=8% Similarity=-0.145 Sum_probs=109.9
Q ss_pred HHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccc
Q 021653 50 TTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEA 129 (309)
Q Consensus 50 ~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (309)
++.+|+++...+.+.....++..++..+.+.+.+|+ +.|+++.++.++..++.+.......-..+.
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~------------- 345 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRWNLA------------- 345 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeeccccc-------------
Confidence 457899999999999999999999999999999985 999999999988888775543211000000
Q ss_pred cc-hhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcccc----
Q 021653 130 NK-GQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIG---- 204 (309)
Q Consensus 130 ~~-~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~g---- 204 (309)
.. .....+....++.+++.+....+...++.+..|++ .+++.++++....++|..+++.+++++.+..|
T Consensus 346 ~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~------~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~ 419 (468)
T TIGR00788 346 FGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSG------CESSVFALLASILHLGSSVSGFLGVLLMETIGITCD 419 (468)
T ss_pred cCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCC------ceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 00 02223344456778888888888899999999988 69999999999999999999999999988777
Q ss_pred -chhhhhHHHHH
Q 021653 205 -WGWGLGIPTFA 215 (309)
Q Consensus 205 -w~~~f~i~~~~ 215 (309)
++.-+....+.
T Consensus 420 ~~~~~~~~i~i~ 431 (468)
T TIGR00788 420 NSNNLWLLILGH 431 (468)
T ss_pred cccchHHHHHHH
Confidence 55555443333
No 226
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.20 E-value=4.8e-06 Score=76.51 Aligned_cols=163 Identities=10% Similarity=0.054 Sum_probs=114.6
Q ss_pred HHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccc--hHHHHHHHHHHHHHHHHHHHHHhh
Q 021653 34 EKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAG--RFWTITIASIIYQIGMICLTISAI 111 (309)
Q Consensus 34 ~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~G--R~~~i~i~~~l~~~g~~~~~~~~~ 111 (309)
.+...-..-..++.++.+.+.-+.-+.+....-..+...++..+.|.++||+ + |......+.+..........+..
T Consensus 282 ~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~-~~~~wl~~~~gl~~~G~~~~~iP~~~- 359 (464)
T KOG3764|consen 282 SNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKY-PHLRWLLSLGGLATVGVSSGPIPFAT- 359 (464)
T ss_pred ccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhc-CchhHHHHHHHHHHHHHHhchhHhhh-
Confidence 3333333445567777777774444777777777888899999999999997 9 53333333332222222222222
Q ss_pred cCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHH
Q 021653 112 LPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILV 191 (309)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l 191 (309)
++..+++-+...+++.+...+...+......+.+...+-...|...++...+.++|..+
T Consensus 360 ---------------------~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~ 418 (464)
T KOG3764|consen 360 ---------------------SIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAI 418 (464)
T ss_pred ---------------------hHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhc
Confidence 67778888888899999988888888888877653221115788889999999999999
Q ss_pred HHHHHHHhhccccchhhhhHHHHHHHHH
Q 021653 192 AVTVLVYIQDNIGWGWGLGIPTFAMFLS 219 (309)
Q Consensus 192 ~~~~~~~i~~~~gw~~~f~i~~~~~~~~ 219 (309)
||.+++.+.+..|+.|...+.++..++-
T Consensus 419 GP~~gg~iv~~iGF~wl~~iig~~n~iy 446 (464)
T KOG3764|consen 419 GPTFGGSLVEAIGFEWLMTIIGILNLIY 446 (464)
T ss_pred cccccchheeehhHHHHHHHHHHHHHHH
Confidence 9999999999999988777766665543
No 227
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.12 E-value=0.00043 Score=66.54 Aligned_cols=205 Identities=11% Similarity=-0.014 Sum_probs=134.2
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHH-hcCCCHH------HH---HH-HHHHHHHHHHhHHHHHHHHHHhcc
Q 021653 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTT-QLHMPLT------KA---AN-TLTNFGGTGSLTPLIGAFVADAYA 86 (309)
Q Consensus 18 ~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~-~~~~s~~------~~---~~-~~~~~~~~~~~~~l~~G~laD~~~ 86 (309)
+.-.+.++.++.++++.-++++.+..+...|..+ .+|-++. +. +. ....+.+...+.+++--++.+++
T Consensus 254 ~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~- 332 (477)
T TIGR01301 254 KYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGW- 332 (477)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 3445788888899999988888888888888764 4543221 11 22 22334444456666777888885
Q ss_pred ch-HHHHHHHHHHHHHHHHHHHHHhhcCCC-CCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccC
Q 021653 87 GR-FWTITIASIIYQIGMICLTISAILPQL-RPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFD 164 (309)
Q Consensus 87 GR-~~~i~i~~~l~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~ 164 (309)
|+ |++..++.++..++++...+..+++.- ++ .+..+.--.++.......++...+.|+..+...+.-.+++++..+
T Consensus 333 g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~ 410 (477)
T TIGR01301 333 GAGKRLWGIVNIILAICLAATVLVTYVAKNSRY--YDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSS 410 (477)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhhhcccc--ccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHcc
Confidence 95 677788888888887777655422110 00 000000001112224556666678899999888888899999888
Q ss_pred CCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcccc--chhhhhHHHHHHHHHHHHHHHhCcc
Q 021653 165 ETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIG--WGWGLGIPTFAMFLSIIAFLIGYPL 229 (309)
Q Consensus 165 ~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~g--w~~~f~i~~~~~~~~~~~~~~~~~~ 229 (309)
+++ ++.|..++.++.++.+...+..+..+.+.+..| -.+.+.+.++..+++.+..+...|+
T Consensus 411 ~~~----~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 411 NLG----AGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred ccC----CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 532 167999999999999999999888777665555 3456777777777776666555554
No 228
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.10 E-value=4.4e-05 Score=54.40 Aligned_cols=61 Identities=21% Similarity=0.207 Sum_probs=50.9
Q ss_pred HHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHH
Q 021653 37 AVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (309)
Q Consensus 37 ~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~ 99 (309)
+.-.+..+++.|+. +.|+|..+.+.+.++......+++++.|+++||+ ||++.++....+.
T Consensus 15 ~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 15 ALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHHH
Confidence 33445567777876 5899999999999999999999999999999997 9998887765543
No 229
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.03 E-value=0.00026 Score=68.81 Aligned_cols=90 Identities=10% Similarity=0.104 Sum_probs=58.4
Q ss_pred CCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHH
Q 021653 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (309)
Q Consensus 19 ~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l 98 (309)
..++.....+....++++..+....+....+.+..+.+... .....+......++..++.++.||+ |||+.++.+.+.
T Consensus 291 ~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~~ 368 (513)
T KOG0254|consen 291 KVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAAG 368 (513)
T ss_pred chHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHHH
Confidence 34555555556666666544333333333333455555432 3334445555666677779999996 999999999999
Q ss_pred HHHHHHHHHHHh
Q 021653 99 YQIGMICLTISA 110 (309)
Q Consensus 99 ~~~g~~~~~~~~ 110 (309)
+.++.+++....
T Consensus 369 m~~~~~~~~~~~ 380 (513)
T KOG0254|consen 369 MSICLVILAVVG 380 (513)
T ss_pred HHHHHHHHHHHH
Confidence 999998888765
No 230
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.02 E-value=0.0013 Score=63.41 Aligned_cols=137 Identities=14% Similarity=0.014 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhccchHHHHH-HHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHH
Q 021653 61 ANTLTNFGGTGSLTPLIGAFVADAYAGRFWTIT-IASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYV 139 (309)
Q Consensus 61 ~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~-i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (309)
+...++..+...+..++.|.++|.. |+||-++ +.+.+..+...++.+.. +.+.....+
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~~-~~Rk~~l~~~~~~~~~~~~~l~~v~--------------------~~~~~~~~~ 131 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADYG-GRRKRFLLIFTLLGVLATALLWFVS--------------------PGQWWLALV 131 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhC--------------------cchHHHHHH
Confidence 4567777888888889999999986 7666554 44445555555555543 113333333
Q ss_pred HHHHHHHhhhcchhhhhhhhhcccCCCChhh--------------------hhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 021653 140 SLLLAALGSGGIRPCVVAFGADQFDETDPKQ--------------------ATKTWKYFNWYYFVMGAAILVAVTVLVYI 199 (309)
Q Consensus 140 ~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~--------------------~~~r~~~~~~~~~~~~iG~~l~~~~~~~i 199 (309)
..++..++.+.......+++.|..++++..+ ...|++..++-+...++|+++...+.-.+
T Consensus 132 l~iia~v~~~~~~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~ 211 (477)
T PF11700_consen 132 LFIIANVGYEASNVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLL 211 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445567777788888899999888774200 00127777777778888888876654333
Q ss_pred hcc--------ccchhhhhHHHHHHHH
Q 021653 200 QDN--------IGWGWGLGIPTFAMFL 218 (309)
Q Consensus 200 ~~~--------~gw~~~f~i~~~~~~~ 218 (309)
... ..-|..+.+.++-.++
T Consensus 212 ~~~~~~~~~~~~~~r~~~~~~a~ww~v 238 (477)
T PF11700_consen 212 VISPGSTASNTWAIRVAFLIVALWWLV 238 (477)
T ss_pred HHcCCCccccchhhhHHHHHHHHHHHH
Confidence 211 2235566665555433
No 231
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.98 E-value=0.00022 Score=71.11 Aligned_cols=174 Identities=13% Similarity=0.129 Sum_probs=113.1
Q ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHH-HHHhHHHHHHHHHHhccc--hHHHHHHHHHH
Q 021653 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGG-TGSLTPLIGAFVADAYAG--RFWTITIASII 98 (309)
Q Consensus 22 ~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~-~~~~~~l~~G~laD~~~G--R~~~i~i~~~l 98 (309)
+..+...+..++....++++..++|.|+++++|++..+++.+.+...+ +..++.+++|+++||+ + .|+.+.++.++
T Consensus 330 ~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~-~~~~~~~~~~~~~~ 408 (633)
T TIGR00805 330 PIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKF-KLNVKKAAYFAICL 408 (633)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeee-cccHHHHHHHHHHH
Confidence 355556677778888889999999999999999999999999887665 5678999999999996 7 45677777766
Q ss_pred HHHHHHHHHHHhhc------------C-------CCCCCCCCCccc----------------------------------
Q 021653 99 YQIGMICLTISAIL------------P-------QLRPPPCEGEQV---------------------------------- 125 (309)
Q Consensus 99 ~~~g~~~~~~~~~~------------~-------~~~~~~~~~~~~---------------------------------- 125 (309)
.+++.++....-++ | .....+|..+..
T Consensus 409 ~~~~~~~~~~~~~~~C~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~ 488 (633)
T TIGR00805 409 STLSYLLCSPLFLIGCESAPVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSN 488 (633)
T ss_pred HHHHHHHHHHHHeecCCCCccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCc
Confidence 66665443311000 0 000112321111
Q ss_pred ---------------------cccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHH
Q 021653 126 ---------------------CQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 184 (309)
Q Consensus 126 ---------------------~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~ 184 (309)
|+..=+.....|++..++..+..+....+.....-...|++ +|..+.+..++.
T Consensus 489 ~~y~~CsCi~~~~~~~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~~~------~rs~alg~~~~~ 562 (633)
T TIGR00805 489 MVYTNCSCVQTPGNSSAKKGLCNPPCATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNPE------EKSLAIGLQWLC 562 (633)
T ss_pred ceecccccccCCCCCCCcCCCCCcccchhHHHHHHHHHHHHHHHHhccCchheEEeeccCcc------cchHHhhHHHHH
Confidence 11000011334444445555555555555555566777777 688888887765
Q ss_pred H-HHHHHHHHHHHHHhhcc
Q 021653 185 M-GAAILVAVTVLVYIQDN 202 (309)
Q Consensus 185 ~-~iG~~l~~~~~~~i~~~ 202 (309)
+ -+|.+-+|++.|++.|.
T Consensus 563 ~rllg~iP~pi~fG~~iD~ 581 (633)
T TIGR00805 563 MRVFATIPAPILFGLLIDV 581 (633)
T ss_pred HHHhcCCChhHHHhhhhhc
Confidence 5 55778899999988774
No 232
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.79 E-value=0.0017 Score=52.87 Aligned_cols=104 Identities=13% Similarity=0.229 Sum_probs=75.8
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHH
Q 021653 63 TLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLL 142 (309)
Q Consensus 63 ~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (309)
-.++......+..+++..+-++. |.|+++++|.+.+.+=.+... -. +.+.++.+-.
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~l-g~K~sm~lg~~~y~~y~~~~~-~~----------------------~~~~l~~~s~ 97 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKL-GPKWSMILGSLGYAIYIASFF-YP----------------------NSYTLYPASA 97 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHH-hhHHHHHHHHHHHHHHHHHHH-hh----------------------hHHHHHHHHH
Confidence 34555666677777888888885 999999999887764332221 11 5677888889
Q ss_pred HHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 021653 143 LAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVL 196 (309)
Q Consensus 143 l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~ 196 (309)
+.|+|.+..++....++.+..+++ .+++-.++++...+.+.++|..+.
T Consensus 98 l~G~~~a~lW~aqg~ylt~~s~~~------~~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 98 LLGFGAALLWTAQGTYLTSYSTEE------TIGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred HHhhhhHHhhHhhhHHHHHcCCHH------HHhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999877655 567777766666666666655443
No 233
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.77 E-value=0.00018 Score=68.62 Aligned_cols=149 Identities=7% Similarity=-0.042 Sum_probs=110.1
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccc
Q 021653 51 TQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEAN 130 (309)
Q Consensus 51 ~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (309)
++++-.+..-+.....-..+-.+.-++.+++-.++ |+-+++.++.....+=.+..+...
T Consensus 399 ed~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~S~L~-------------------- 457 (618)
T KOG3762|consen 399 EDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYYSYLQ-------------------- 457 (618)
T ss_pred hhcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHHHHhc--------------------
Confidence 45554444334333333444456667888999996 999999999887777777777666
Q ss_pred chhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHH-HHHHHHHHHHHHHHHhhccccchhhh
Q 021653 131 KGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF-VMGAAILVAVTVLVYIQDNIGWGWGL 209 (309)
Q Consensus 131 ~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~-~~~iG~~l~~~~~~~i~~~~gw~~~f 209 (309)
++|+....-+++|+-.+.++.++.+|+++..|++ .+.++-+.... ...+|-.+|.++++.+.+.+|-+..|
T Consensus 458 --n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~------l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf 529 (618)
T KOG3762|consen 458 --NPWMVLPIEILQGITHALIWAAIISYASHVAPPG------LRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTF 529 (618)
T ss_pred --CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCc------chHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHH
Confidence 7788888889999999999999999999999998 45555555433 34556666777788888888988899
Q ss_pred hHHHHHHHHHHHHHHHhCc
Q 021653 210 GIPTFAMFLSIIAFLIGYP 228 (309)
Q Consensus 210 ~i~~~~~~~~~~~~~~~~~ 228 (309)
.+.++.+++.++.+....+
T Consensus 530 ~~~giAcl~~l~~~~~iq~ 548 (618)
T KOG3762|consen 530 RIFGIACLVTLALFISIQL 548 (618)
T ss_pred HHHHHHHHHHHHHHHHhhh
Confidence 9888888777766655443
No 234
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.76 E-value=7.4e-08 Score=91.57 Aligned_cols=183 Identities=15% Similarity=0.090 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g 102 (309)
.....+....+..+..+....+...++.+..+.++. -.......+...++.+++.++.||+ |||+.++++.++..++
T Consensus 253 ~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~~ 329 (451)
T PF00083_consen 253 RLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAIC 329 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-cccccccccccccccc
Confidence 344444444444444333333444445556666665 1222233445556677778999996 9999999998887777
Q ss_pred HHHHH-HHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhh-cchhhhhhhhhcccCCCChhhhhhhhHHHHH
Q 021653 103 MICLT-ISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSG-GIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (309)
Q Consensus 103 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g-~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 180 (309)
.+.+. .....+. .++..+... .+...+...+.+ +..+....+.+|.||++ .|++..+.
T Consensus 330 ~~~~~~~~~~~~~-------------~~~~~~~~~-i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~------~R~~~~~~ 389 (451)
T PF00083_consen 330 SLILGIIFFLGVS-------------SSSWWSILS-IVFLALFFAFFSLGWGPLPWIYTAELFPTK------VRSTGIGL 389 (451)
T ss_pred ccccccccccccc-------------ccccccccc-ceeeeecccccccccccccccccccccccc------cccccccc
Confidence 66664 1110000 000001111 111111212222 23345557889999998 68888888
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHhCc
Q 021653 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (309)
Q Consensus 181 ~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~~ 228 (309)
.+....+++.+++.+..++.+..+-...+.+.+++.++..+..+...|
T Consensus 390 ~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lp 437 (451)
T PF00083_consen 390 SYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLP 437 (451)
T ss_pred ccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEe
Confidence 888888888888888777777666334455555544444444333333
No 235
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.71 E-value=2.3e-06 Score=75.37 Aligned_cols=136 Identities=12% Similarity=0.134 Sum_probs=110.1
Q ss_pred HHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 021653 43 TNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEG 122 (309)
Q Consensus 43 ~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 122 (309)
.-+..++..+.+++.++..++.++++.-..+.+.++|++.||.+|-|+.-++-+.+..+|.+..+....
T Consensus 64 ~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi----------- 132 (459)
T KOG4686|consen 64 GALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGI----------- 132 (459)
T ss_pred hhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchH-----------
Confidence 335566666666776777788888888889999999999999999998888888888888888775441
Q ss_pred ccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 021653 123 EQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN 202 (309)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~ 202 (309)
....+++..+|++.|+|.-........|..-+|..+ +.+..++.+.-..-+|+.+-.++.+++.+.
T Consensus 133 --------~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGK------ELn~vfGlqlSvAR~GstvNf~lm~~ly~~ 198 (459)
T KOG4686|consen 133 --------SHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGK------ELNFVFGLQLSVARLGSTVNFLLMPFLYDT 198 (459)
T ss_pred --------HHHHHHHHhhheeeccCchhhhhhhcceeEEEecCc------cccchhhHHHHHHHhhceeeeeecHHHHHH
Confidence 127888999999999998888888889999999987 699999998888888888777777777664
Q ss_pred c
Q 021653 203 I 203 (309)
Q Consensus 203 ~ 203 (309)
.
T Consensus 199 ~ 199 (459)
T KOG4686|consen 199 M 199 (459)
T ss_pred H
Confidence 4
No 236
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.65 E-value=0.0017 Score=63.89 Aligned_cols=150 Identities=8% Similarity=0.000 Sum_probs=101.1
Q ss_pred ccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHH---HHHHHHHHHHHHHHhHHHHHHHHHHhccchHH-HHHHHH
Q 021653 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLT---KAANTLTNFGGTGSLTPLIGAFVADAYAGRFW-TITIAS 96 (309)
Q Consensus 21 ~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~---~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~-~i~i~~ 96 (309)
.|.+...+++.++..+.+|++....|......++-+.. ..+........+..++.++.|.+.-+. ||.| .+++++
T Consensus 309 ~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~i-r~~Kw~li~~~ 387 (599)
T PF06609_consen 309 RRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKI-RHIKWQLIFGS 387 (599)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHc-cchhHHHHHHH
Confidence 45666666777788888888887788777777766553 456666677777888888888888774 7755 445666
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhH
Q 021653 97 IIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWK 176 (309)
Q Consensus 97 ~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~ 176 (309)
+++.++..+++... | + +....+...++.|+|.|...........-..|++ ..+.
T Consensus 388 ~~~ta~~Gama~~~--~----------------~--n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~------~ig~ 441 (599)
T PF06609_consen 388 VLMTAFCGAMAAVR--P----------------D--NKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDE------DIGT 441 (599)
T ss_pred HHHHHHHHHHHHcc--C----------------C--CcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCch------HHHH
Confidence 66665555555433 1 1 2223345567888888887655555444444543 6888
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 021653 177 YFNWYYFVMGAAILVAVTVLV 197 (309)
Q Consensus 177 ~~~~~~~~~~iG~~l~~~~~~ 197 (309)
..+.......+|+.++..+..
T Consensus 442 a~gL~~s~R~~GGsIg~aIy~ 462 (599)
T PF06609_consen 442 ATGLTGSIRSIGGSIGYAIYN 462 (599)
T ss_pred HHHHHHHHHHHhhHHHHHHHH
Confidence 888888888888888876643
No 237
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.64 E-value=0.00011 Score=69.03 Aligned_cols=169 Identities=15% Similarity=0.078 Sum_probs=106.7
Q ss_pred HHHHHHHHHHhhHHHHHHHhHHhcCCCHHH--------HHHHHHHHHHHHHh-HHHHHHHHHHhccchHHHHHHHHHHHH
Q 021653 30 NEVCEKLAVVGFNTNMISYLTTQLHMPLTK--------AANTLTNFGGTGSL-TPLIGAFVADAYAGRFWTITIASIIYQ 100 (309)
Q Consensus 30 ~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~--------~~~~~~~~~~~~~~-~~l~~G~laD~~~GR~~~i~i~~~l~~ 100 (309)
.-++...++|+...+...-++ ..++.+.+ .+....+...+..+ +..++..+.|+. ||++..+.+.+++.
T Consensus 312 ~WFllDiafy~~nL~~s~I~~-~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~i-GRk~iq~~GF~~~~ 389 (538)
T KOG0252|consen 312 TWFLLDIAFYGQNLFQSVIFS-AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDII-GRKYIQLMGFFIMT 389 (538)
T ss_pred HHHhhhhhhhccccHHHHHHH-hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehh-hhHHHHHhhHHHHH
Confidence 334445566666555554443 33433322 22223333333333 667788889995 99999999888777
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHH
Q 021653 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (309)
Q Consensus 101 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 180 (309)
+-.+.++...+ + ... ..+.+...-+.+-++.-+-.+....+-+|.||++ -|+...++
T Consensus 390 i~~~~~~~~y~----------~-----~~~--~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FPar------vR~t~hGI 446 (538)
T KOG0252|consen 390 IFFFVIAGPYN----------Q-----LEN--TIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPAR------VRSTCHGI 446 (538)
T ss_pred HHHHHHcCCcc----------c-----ccc--cCceeehHHHHHHHHhcCCCceeEEeehhhchHH------HhhhhhhH
Confidence 65555554331 0 001 1111222222233333333444455557999998 79999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhc-----cccchhhhhHHHHHHHHHHHHH
Q 021653 181 YYFVMGAAILVAVTVLVYIQD-----NIGWGWGLGIPTFAMFLSIIAF 223 (309)
Q Consensus 181 ~~~~~~iG~~l~~~~~~~i~~-----~~gw~~~f~i~~~~~~~~~~~~ 223 (309)
.-.+.-+|++++.....++++ ..+.++.|++.+.+..++.+..
T Consensus 447 sAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T 494 (538)
T KOG0252|consen 447 SAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFT 494 (538)
T ss_pred HHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHhee
Confidence 999999999999999999998 7789999999999888776543
No 238
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.64 E-value=0.00031 Score=63.82 Aligned_cols=84 Identities=8% Similarity=-0.168 Sum_probs=69.6
Q ss_pred hHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcc----------
Q 021653 133 QVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN---------- 202 (309)
Q Consensus 133 ~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~---------- 202 (309)
++..+.++.++.|.|.+..++..++++++..+++ ++.+..++.+....+|+.++|.+.+.+...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~------~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~ 82 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIE------TAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVA 82 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcc------hHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhh
Confidence 7888999999999999999999999999998876 588888999999999999999998876632
Q ss_pred ------ccchhhhhHHHHHHHHHHHH
Q 021653 203 ------IGWGWGLGIPTFAMFLSIIA 222 (309)
Q Consensus 203 ------~gw~~~f~i~~~~~~~~~~~ 222 (309)
..|+++|++.+++..+..++
T Consensus 83 ~~~~~~~~~~~~yl~ia~~~~~~~i~ 108 (310)
T TIGR01272 83 TANAEAAKVHTPYLLLAGALAVLAII 108 (310)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36888888666554443333
No 239
>PTZ00207 hypothetical protein; Provisional
Probab=97.61 E-value=0.001 Score=65.53 Aligned_cols=177 Identities=14% Similarity=0.063 Sum_probs=115.4
Q ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhc-CCCHHH--HHHHHHHHHHHHHhHHHHHHHHHHhccchHH--------
Q 021653 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQL-HMPLTK--AANTLTNFGGTGSLTPLIGAFVADAYAGRFW-------- 90 (309)
Q Consensus 22 ~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~-~~s~~~--~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~-------- 90 (309)
..+|++....+|..-.-..+..|+- +.-+.+ |.+... ....++.+.++.++|-+.+|.++.. .-||+
T Consensus 353 ~d~Wll~~~~~cg~g~gl~~~~N~~-qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~-~~~~~~~~r~prt 430 (591)
T PTZ00207 353 ARLWCLLWSIFCCVGAHFVIIFNAR-FIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIW-SQKRRAEDRVPIT 430 (591)
T ss_pred hhHHHHHHHHHHhhCchheeeecHH-HHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHH-HHhhccccccchh
Confidence 3566666666665544444445553 444556 663322 2237899999999999999999832 23332
Q ss_pred -HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChh
Q 021653 91 -TITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPK 169 (309)
Q Consensus 91 -~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~ 169 (309)
.+.+..+ ..++.+++++.. ....++++-++.|++.|..+++.++..+|.|- +
T Consensus 431 ~~l~~~~~-~~~~~lll~~~~----------------------p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k--- 483 (591)
T PTZ00207 431 IALFIPSV-CIITMLTLFLTL----------------------PKAALPLPYFIAAFANGFMAATIALVTRTIFA-K--- 483 (591)
T ss_pred HHHHHHHH-HHHHHHHHHHHC----------------------CccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-c---
Confidence 2333333 555556555543 22568999999999999999999999999999 5
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHH-HHHHHHhhcc-------------ccchhhhhHHHHHHHHHHHHHHHhCcce
Q 021653 170 QATKTWKYFNWYYFVMGAAILVA-VTVLVYIQDN-------------IGWGWGLGIPTFAMFLSIIAFLIGYPLY 230 (309)
Q Consensus 170 ~~~~r~~~~~~~~~~~~iG~~l~-~~~~~~i~~~-------------~gw~~~f~i~~~~~~~~~~~~~~~~~~~ 230 (309)
.-|..++..+.+.-+|+.+= -.+.|.+-|. .-++.+|.+.+.+.+++.++-....-|+
T Consensus 484 ---~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~ 555 (591)
T PTZ00207 484 ---DPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQY 555 (591)
T ss_pred ---chHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeeh
Confidence 37888888777777777653 3345544321 1267888888888777776654443333
No 240
>PRK03612 spermidine synthase; Provisional
Probab=97.56 E-value=0.02 Score=55.82 Aligned_cols=152 Identities=11% Similarity=0.036 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHH---HH
Q 021653 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM---IC 105 (309)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~---~~ 105 (309)
+..++..++.........-.+...+|-+....+.+++++.++..+|+.+++.++++. -|+.. .+-..+.+++. .+
T Consensus 21 ~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~~-~~e~~i~l~~~~~~~l 98 (521)
T PRK03612 21 AAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGFV-AVELLLALLGGLSALI 98 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHHH-HHHHHHHHHHHHHHHH
Confidence 334444444444445555556667888999999999999999999999999887553 23322 11111111111 11
Q ss_pred HHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHH
Q 021653 106 LTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM 185 (309)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~ 185 (309)
+.....+ .......++...++.++-.|+..|.+..+..+.... +-+...+..|...
T Consensus 99 l~~~~~~-----------------~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~-------~~g~~~g~ly~~n 154 (521)
T PRK03612 99 LYAAFAF-----------------QGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQ-------HLGHNVATVLAAD 154 (521)
T ss_pred HHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-------chhhhhhhhHhHH
Confidence 1111100 000112223334556777777766666655443221 2344556667778
Q ss_pred HHHHHHHHHHHHHh-hccccch
Q 021653 186 GAAILVAVTVLVYI-QDNIGWG 206 (309)
Q Consensus 186 ~iG~~l~~~~~~~i-~~~~gw~ 206 (309)
++|+++|.++.+++ ...+|-.
T Consensus 155 tlGa~~G~l~~~~vLlp~lG~~ 176 (521)
T PRK03612 155 YLGALVGGLAFPFLLLPRLGLI 176 (521)
T ss_pred hHHHHHHHHHHHHHHHHhcchH
Confidence 88888888887754 3456644
No 241
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.44 E-value=0.00023 Score=62.44 Aligned_cols=96 Identities=19% Similarity=0.160 Sum_probs=69.6
Q ss_pred HHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcc
Q 021653 45 MISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQ 124 (309)
Q Consensus 45 l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 124 (309)
...|+.+.+++...+.+.+.-.-.+...+...+.|-++|+. |||+..+..++ .+++..+..+.|
T Consensus 59 YvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracvtyci----tYiLsCiTKhSp----------- 122 (454)
T KOG4332|consen 59 YVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCI----TYILSCITKHSP----------- 122 (454)
T ss_pred eeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-ccccceeeehH----HHHHHHHhhcCC-----------
Confidence 34566678888888888887777777777788889999996 99997665544 444555554222
Q ss_pred ccccccchhHHHHHHHHHHHHHhhhcchhhhhhh-hhcccC
Q 021653 125 VCQEANKGQVAILYVSLLLAALGSGGIRPCVVAF-GADQFD 164 (309)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~-~ad~~~ 164 (309)
++-.+++||++-|+.++...+..-++ ++|.-+
T Consensus 123 --------qYkVLmVGR~LGGiaTsLLFSaFEsWliaEHne 155 (454)
T KOG4332|consen 123 --------QYKVLMVGRVLGGIATSLLFSAFESWLIAEHNE 155 (454)
T ss_pred --------ceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhh
Confidence 56678999999999999877665553 455543
No 242
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.38 E-value=0.006 Score=56.95 Aligned_cols=128 Identities=13% Similarity=-0.049 Sum_probs=86.4
Q ss_pred HHHHHHHhHHhcCC---CHH----HHHHHHHHHHHHHHhHHHHHHHHHHhccchHH-HHHHHHHHHHHHHHHHHHHhhcC
Q 021653 42 NTNMISYLTTQLHM---PLT----KAANTLTNFGGTGSLTPLIGAFVADAYAGRFW-TITIASIIYQIGMICLTISAILP 113 (309)
Q Consensus 42 ~~~l~~yl~~~~~~---s~~----~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~-~i~i~~~l~~~g~~~~~~~~~~~ 113 (309)
...+|+|+++..+- ++. -.+...++......+.+++-|-++|.. |+|| .+-....+.++.+.++.+..
T Consensus 35 t~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L~~i~--- 110 (438)
T COG2270 35 TFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLLWFIP--- 110 (438)
T ss_pred eehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHhC---
Confidence 34578999876654 332 345556677777788889999999997 8655 44455555566666666554
Q ss_pred CCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHH
Q 021653 114 QLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAV 193 (309)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~ 193 (309)
+........+...+..++..+......+++.|..+++ +.++..+.-+-...+|+.+..
T Consensus 111 ----------------~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~------~~~riS~lg~~~gylgs~i~l 168 (438)
T COG2270 111 ----------------PGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKD------NMGRISGLGWALGYLGSVILL 168 (438)
T ss_pred ----------------CCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCcc------ccCcccccccccccccchHHH
Confidence 1124455555667778999999999999999988876 345555555556677776654
Q ss_pred HH
Q 021653 194 TV 195 (309)
Q Consensus 194 ~~ 195 (309)
+.
T Consensus 169 i~ 170 (438)
T COG2270 169 IF 170 (438)
T ss_pred HH
Confidence 44
No 243
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.36 E-value=0.029 Score=54.57 Aligned_cols=122 Identities=8% Similarity=-0.003 Sum_probs=81.5
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccc
Q 021653 51 TQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEAN 130 (309)
Q Consensus 51 ~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (309)
..+|.+......+... .........+..-|+. |||.....+.++..++.++......
T Consensus 346 ~~lg~~~~~~~~~~~~---~~~p~~~~~~~~~~~~-gR~~~~~~~~~~~~~~~~~~~~~~~------------------- 402 (521)
T KOG0255|consen 346 SGLGGNIYLNFTLSGL---VELPAYFRNGLLLPEF-GRRPPLFLSLFLAGIGLLLFGWLPD------------------- 402 (521)
T ss_pred hhcCchHHHHHHHHHH---HHhhHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHhhc-------------------
Confidence 3455555444333333 3444445568899996 9999999999999888888887651
Q ss_pred chhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 021653 131 KGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD 201 (309)
Q Consensus 131 ~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~ 201 (309)
........+...+...+.+........+.+|.+|+. .|....+.......+|++++|.+......
T Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~------~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 403 DLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTV------VRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 111112223333334444555556688889999988 68999998888899999998877654443
No 244
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.29 E-value=0.024 Score=54.80 Aligned_cols=120 Identities=13% Similarity=-0.011 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhccchH-H------HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccch
Q 021653 60 AANTLTNFGGTGSLTPLIGAFVADAYAGRF-W------TITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKG 132 (309)
Q Consensus 60 ~~~~~~~~~~~~~~~~l~~G~laD~~~GR~-~------~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (309)
+++..+.-.+...+.+++.+++=.|. +|| + =+.+|+++..+|.+.+.++..... .....
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l-~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~-------------~~~~~ 375 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKES-VAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSA-------------MYGHS 375 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHH-hcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcC-------------CCCCc
Confidence 34455555555566666666665553 332 1 156677777888777776552111 00123
Q ss_pred hHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHH-HHHHHHHHHHHHHHh
Q 021653 133 QVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV-MGAAILVAVTVLVYI 199 (309)
Q Consensus 133 ~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~-~~iG~~l~~~~~~~i 199 (309)
+...+.+..++.++|.-+..|...+++++..|++ -+|.+++.+++. ..+|..++..+.+..
T Consensus 376 s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~------~~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 376 SLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPG------VTGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred CHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6666777888899999999999999999999987 799999988774 467777776665554
No 245
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.28 E-value=0.0019 Score=60.63 Aligned_cols=155 Identities=15% Similarity=0.126 Sum_probs=89.9
Q ss_pred hcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccc
Q 021653 52 QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFW-TITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEAN 130 (309)
Q Consensus 52 ~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~-~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (309)
.-|+++..+|.+.....+...++++++|.++||. ..++ ++++......++...+...+..+
T Consensus 295 ~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dkt-k~fk~~~~v~~~~~~v~~~~l~~~t~~~----------------- 356 (480)
T KOG2563|consen 295 PSGYEGVFAGYIGALMIVAGMLGALASGIIADKT-KKFKLTTLVLYLFALVGTLMLLTCTLFL----------------- 356 (480)
T ss_pred cccCCccccchhHHHHHHHHHHHHHHHHhhhhhh-hhHHHHHHHHHHHHHHHHHHHHHhhccC-----------------
Confidence 4577778899999999999999999999999996 5544 44444444444432222111111
Q ss_pred chhHHHHHHHHHHHHHhhhcchhhhhhhhhcc-cCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcccc----c
Q 021653 131 KGQVAILYVSLLLAALGSGGIRPCVVAFGADQ-FDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIG----W 205 (309)
Q Consensus 131 ~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~-~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~g----w 205 (309)
...+.++....+.|+...+..|.-.-+..|. +|..+ +.-.+..+...++-+.+-.+..+...+..+ |
T Consensus 357 -~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E-------~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~ 428 (480)
T KOG2563|consen 357 -GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAE-------GTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNT 428 (480)
T ss_pred -CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCC-------cccceeEEeehhHHHHHHHHHHHHHhhccCCCCCC
Confidence 1334455555667777777777777777666 55432 122233333344444444455555555555 4
Q ss_pred hhhhhHHHHHHHHHHHHHHHhCcceec
Q 021653 206 GWGLGIPTFAMFLSIIAFLIGYPLYRN 232 (309)
Q Consensus 206 ~~~f~i~~~~~~~~~~~~~~~~~~~~~ 232 (309)
...-+.......+..++.++.++.|++
T Consensus 429 ~~~~i~~~~~~~l~~~lva~~r~~y~R 455 (480)
T KOG2563|consen 429 FPANIFLTVSALLGAILVAFFRPDYRR 455 (480)
T ss_pred ccchhHhHHHHHHHHHHHhhhhhhHHh
Confidence 444444555555555566666666653
No 246
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.26 E-value=0.00029 Score=66.07 Aligned_cols=167 Identities=13% Similarity=0.102 Sum_probs=107.9
Q ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhc---cchHHHHH-HHHH
Q 021653 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY---AGRFWTIT-IASI 97 (309)
Q Consensus 22 ~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~---~GR~~~i~-i~~~ 97 (309)
+.+..+..+.+...+++-.=.+++++|++ .+|.+..-.+.+-..--+...+.+++.|..+||. +||||-.+ .+.+
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 34444444455555555444566777775 7788877766666666667778889999999984 69876554 4555
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHH
Q 021653 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (309)
Q Consensus 98 l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~ 177 (309)
...++..+...+..+-... |+....| .......++.++..+.=+..-..+.+.-++.+|....++ ++.+.
T Consensus 111 ~i~~~l~Lig~aaDig~~l---gd~~~~~--~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~-----~~~~A 180 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLL---GDNERKP--VKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDA-----KKTRA 180 (498)
T ss_pred HHHHHHhhhhhHhhhhHHh---cCCcccc--cchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChh-----hhhcc
Confidence 5666666666555221111 1111111 122356677788888888887888888999999987653 22227
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 021653 178 FNWYYFVMGAAILVAVTVLVYI 199 (309)
Q Consensus 178 ~~~~~~~~~iG~~l~~~~~~~i 199 (309)
.+++.+...+|+.+|....+|.
T Consensus 181 ns~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 181 NSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred chhHHHHHHhcceeeeeccccc
Confidence 7788888999998887776643
No 247
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.25 E-value=0.006 Score=44.09 Aligned_cols=73 Identities=7% Similarity=0.042 Sum_probs=62.0
Q ss_pred HHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHh
Q 021653 33 CEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISA 110 (309)
Q Consensus 33 ~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~ 110 (309)
+.||+| +.+.+.++++.++|..+++.+.+...+++.+|++...++.++. .+++.+..+.++..+.++.+.+..
T Consensus 6 igRFay----TplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 6 IGRFAY----TPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred hHHHHH----HhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455654 2355677899999999999999999999999999999999985 888999999988888888888765
No 248
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.21 E-value=0.0056 Score=56.49 Aligned_cols=151 Identities=12% Similarity=0.127 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHh-HHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHH-HHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYL-TTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITI-ASIIYQ 100 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl-~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i-~~~l~~ 100 (309)
..+.++....+.....|....+...++ .+.+++++.+.+.+.+....+..+.++.-+...|++.|.-+.... +..+..
T Consensus 261 ~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~v 340 (451)
T KOG2615|consen 261 SVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIV 340 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHH
Confidence 344455544444444455555555555 467999999999998888888888888888888987454444443 333333
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHH
Q 021653 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (309)
Q Consensus 101 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 180 (309)
-..+++.... ....++.+..+-.+..+...++...++....|.+ +||+..+.
T Consensus 341 P~~llls~~~----------------------~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~------qrG~~~Gi 392 (451)
T KOG2615|consen 341 PAFLLLSLAR----------------------TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQS------QRGTLNGI 392 (451)
T ss_pred HHHHHHhccc----------------------cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcc------cchHHHHH
Confidence 3334444333 4567888889999999999999999999988887 89999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhc
Q 021653 181 YYFVMGAAILVAVTVLVYIQD 201 (309)
Q Consensus 181 ~~~~~~iG~~l~~~~~~~i~~ 201 (309)
......++=.+||.+.|.+..
T Consensus 393 ~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 393 FRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HHHHHHHHHHhhhhhhheeEE
Confidence 988899999999999877654
No 249
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.10 E-value=0.077 Score=49.91 Aligned_cols=152 Identities=11% Similarity=0.033 Sum_probs=95.0
Q ss_pred hHHHHHHHhHHh-cCCCHHHHHH-HHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 021653 41 FNTNMISYLTTQ-LHMPLTKAAN-TLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPP 118 (309)
Q Consensus 41 ~~~~l~~yl~~~-~~~s~~~~~~-~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~ 118 (309)
.-.++..|+++. .|++..+... +.-++.-.....-++...++|.. |.|++++++.+..++...++.+..
T Consensus 22 sEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l-~Ykpviil~~~~~i~t~~lll~~~-------- 92 (412)
T PF01770_consen 22 SEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL-RYKPVIILQALSYIITWLLLLFGT-------- 92 (412)
T ss_pred CCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHC--------
Confidence 346678899887 8999887654 45555555666677889999985 999999999998888888877766
Q ss_pred CCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 021653 119 PCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVY 198 (309)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~ 198 (309)
+...+-+.-++-|++.+. .....+|+=-..|++ +..+..+....+.-+|-.++.+++-.
T Consensus 93 --------------sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~------~yq~vts~~raa~l~g~~~s~~lgQl 151 (412)
T PF01770_consen 93 --------------SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKE------HYQKVTSYTRAATLVGRFISSLLGQL 151 (412)
T ss_pred --------------cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666666766654 233344443333433 34444444444444555554444433
Q ss_pred hhc--cccchhhhhHHHHHHHHHHHH
Q 021653 199 IQD--NIGWGWGLGIPTFAMFLSIIA 222 (309)
Q Consensus 199 i~~--~~gw~~~f~i~~~~~~~~~~~ 222 (309)
+.. ..++.....+......+++++
T Consensus 152 lvs~~~~sy~~L~~isl~~~~~a~~~ 177 (412)
T PF01770_consen 152 LVSFGGVSYFQLNYISLASVSLALLI 177 (412)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 332 334555556666555555544
No 250
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.03 E-value=0.012 Score=56.45 Aligned_cols=127 Identities=14% Similarity=0.188 Sum_probs=104.5
Q ss_pred HHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCc
Q 021653 44 NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGE 123 (309)
Q Consensus 44 ~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 123 (309)
.+..|+...++++..+.+...+...+...++.++...+--+.+|-++++.+|.+...++..+.++++
T Consensus 263 ~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~------------- 329 (463)
T KOG2816|consen 263 VLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFAT------------- 329 (463)
T ss_pred EEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhc-------------
Confidence 4567778899999999999999999999999998874444446999999999999999999999988
Q ss_pred cccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 021653 124 QVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI 199 (309)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i 199 (309)
+.++++.+..+.++ .+...+...++.+.+.+.+ ++|+.+++......+.+++++.+-+.+
T Consensus 330 ---------~~w~~~~~~v~~~~-~~~~~pa~~s~~s~~v~~~------e~g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 330 ---------ETWMMFAAGVVVAL-AGIVFPAIRAFASILVSPE------EQGKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred ---------cchhhhHHHHHHHh-hcchhHHHHhHHHhhcccc------cccchhhHHHHHHHHhhhhhHHHHHHH
Confidence 77777777666554 3455677778888888877 799999999999999999998886655
No 251
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.01 E-value=0.065 Score=50.91 Aligned_cols=143 Identities=12% Similarity=0.020 Sum_probs=111.1
Q ss_pred HHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhc
Q 021653 33 CEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAIL 112 (309)
Q Consensus 33 ~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~ 112 (309)
+-.+..-+....+..|+..+ |+++...+..-+.-.+....+.++..++-+|+ |.-|+=+++.........+...+-+.
T Consensus 269 lLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v~~~~~ 346 (432)
T PF06963_consen 269 LLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCVVSFWA 346 (432)
T ss_pred HHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHHHHHhc
Confidence 33444445566678898866 99999999998888899999999999999996 99999999888877776666665544
Q ss_pred CCCCCCCCCCccccccc-cchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHH
Q 021653 113 PQLRPPPCEGEQVCQEA-NKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILV 191 (309)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l 191 (309)
|. +| +..+...++.+.++.=+|.=++.-++..++-|..|++ +||.+.+...-..++-.++
T Consensus 347 ~~-------------~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~------~Rg~v~gvq~sl~~lf~ll 407 (432)
T PF06963_consen 347 PG-------------SPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPES------ERGAVSGVQNSLQSLFELL 407 (432)
T ss_pred CC-------------CCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHH------HhhHHHHHHHHHHHHHHHH
Confidence 33 11 2346667777777777888888888999999988877 7999999988888888877
Q ss_pred HHHHH
Q 021653 192 AVTVL 196 (309)
Q Consensus 192 ~~~~~ 196 (309)
...+.
T Consensus 408 ~~~~~ 412 (432)
T PF06963_consen 408 SFVLT 412 (432)
T ss_pred HHHHH
Confidence 65553
No 252
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.71 E-value=0.031 Score=55.98 Aligned_cols=83 Identities=16% Similarity=0.251 Sum_probs=62.2
Q ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHH-HHHhHHHHHHHHHHhc-cchHHHHHHHHHHH
Q 021653 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGG-TGSLTPLIGAFVADAY-AGRFWTITIASIIY 99 (309)
Q Consensus 22 ~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~-~~~~~~l~~G~laD~~-~GR~~~i~i~~~l~ 99 (309)
+...+.++...++...+.+..+++|-|+.++|+.+.+.+..+.+...+ +..+|.+++|++.-|+ +.-|.+....++..
T Consensus 392 ~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~ 471 (735)
T KOG3626|consen 392 PIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCS 471 (735)
T ss_pred chHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHH
Confidence 345566678888999999999999999999999999999998866655 4467788999999885 34455554444444
Q ss_pred HHHHH
Q 021653 100 QIGMI 104 (309)
Q Consensus 100 ~~g~~ 104 (309)
++.++
T Consensus 472 ~l~l~ 476 (735)
T KOG3626|consen 472 VLSLL 476 (735)
T ss_pred HHHHH
Confidence 44333
No 253
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.55 E-value=0.66 Score=44.71 Aligned_cols=164 Identities=11% Similarity=0.027 Sum_probs=89.6
Q ss_pred ccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCH-----HHHHHHHHHHHHHHH-hHHHHHHHHHHhccchHHHHHH
Q 021653 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPL-----TKAANTLTNFGGTGS-LTPLIGAFVADAYAGRFWTITI 94 (309)
Q Consensus 21 ~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~-----~~~~~~~~~~~~~~~-~~~l~~G~laD~~~GR~~~i~i 94 (309)
++....+.+..++..+.++... -+.+.+.++. .....+-+.....+. +..++.+++++|+ +|++.+.+
T Consensus 6 ~~k~~~~~l~fF~il~~Y~iLR-----~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~~ 79 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTILR-----DTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFYT 79 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-----hhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHHH
Confidence 4455555555555555554322 2344555422 233444443333333 3367889999996 99998887
Q ss_pred HHHHHHHHHHHHHHHhhcCC---CCCC-CCCCcccccccc----------chhHHHHHHHHHHHHHhhhcchhhhhhhhh
Q 021653 95 ASIIYQIGMICLTISAILPQ---LRPP-PCEGEQVCQEAN----------KGQVAILYVSLLLAALGSGGIRPCVVAFGA 160 (309)
Q Consensus 95 ~~~l~~~g~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~----------~~~~~~~~~~~~l~gig~g~~~~~~~~~~a 160 (309)
....+..-.++.++.- .|. +++. .|+.... ..+. +.....||+..=+ .|.-..+-.-..+..
T Consensus 80 ~~~~F~~~f~lF~~vl-~p~~~~~~p~~~~~~~~~-~~~~~~~~~i~~~~~W~~~~FYv~~el--w~~~vvS~lFW~fan 155 (472)
T TIGR00769 80 VISPFLGFFALFAFVI-YPLSDLLHPTALADKLLS-LLPPGFMGFIAILRIWSFALFYVMAEL--WGSVVLSLLFWGFAN 155 (472)
T ss_pred HHHHHHHHHHHHHHHH-hcchhhcCCcHHHHHHHh-hcchhhHHHHHHHhhhhHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 6666655555554432 111 1110 0000000 0000 1122233332211 111122225677889
Q ss_pred cccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 021653 161 DQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQ 200 (309)
Q Consensus 161 d~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~ 200 (309)
|.+..+ +-.++++.+..+.|+|.++++.+..++.
T Consensus 156 di~t~~------qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 156 QITTID------EAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred hcCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999877 7899999999999999999998877765
No 254
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.18 E-value=0.0013 Score=64.40 Aligned_cols=174 Identities=11% Similarity=0.123 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHH-HHHhHHHHHHHHHHhc-cchHHHHHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGG-TGSLTPLIGAFVADAY-AGRFWTITIASIIYQ 100 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~-~~~~~~l~~G~laD~~-~GR~~~i~i~~~l~~ 100 (309)
...++.+...++.+...++.+++|-|++.+|++++++++.+.+...+ +..+|.+++|++..|+ ++.|..+....+..+
T Consensus 306 ~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~ 385 (539)
T PF03137_consen 306 VFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSI 385 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHH
Confidence 34444566777888888999999999999999999999998877655 6678889999999986 344555554444444
Q ss_pred HHHHHHHHH----hh---c-----CC----C------CCCCCC----------CccccccccchhHHHHHHHHHHHHHhh
Q 021653 101 IGMICLTIS----AI---L-----PQ----L------RPPPCE----------GEQVCQEANKGQVAILYVSLLLAALGS 148 (309)
Q Consensus 101 ~g~~~~~~~----~~---~-----~~----~------~~~~~~----------~~~~~~~~~~~~~~~~~~~~~l~gig~ 148 (309)
++.++.... .. + |. - ...+|. ..+.|...-......|.+..++..+..
T Consensus 386 v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~ 465 (539)
T PF03137_consen 386 VSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFT 465 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHH
Confidence 433331110 00 0 11 0 011121 013343331223455555555555555
Q ss_pred hcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHH-HHHHHHHHHHHHHHhhcc
Q 021653 149 GGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV-MGAAILVAVTVLVYIQDN 202 (309)
Q Consensus 149 g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~-~~iG~~l~~~~~~~i~~~ 202 (309)
+..........-...+++ +|+.+.+..... .-+|.+-+|++.|.+.|.
T Consensus 466 ~~~~~p~~~i~LR~V~~~------~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 466 FMSQVPSTLITLRCVPPE------QRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp -------------------------------------------------------
T ss_pred HhcccchheeeeccCChh------hcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 555555555556777776 688888877654 456778899999888875
No 255
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=95.97 E-value=0.014 Score=55.83 Aligned_cols=197 Identities=9% Similarity=-0.009 Sum_probs=122.4
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHH--HHHHHHHHhc--cchHHHHH
Q 021653 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTP--LIGAFVADAY--AGRFWTIT 93 (309)
Q Consensus 18 ~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~--l~~G~laD~~--~GR~~~i~ 93 (309)
+-.|+..+.++...+...+.+..+.+..+.+....++++..++....+.......+.+ +...+..-+. +.+|..++
T Consensus 258 ~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~ 337 (488)
T KOG2325|consen 258 KLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIIL 337 (488)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeee
Confidence 5578888888888888888887767767777777888888776555544433332222 1222223332 13345555
Q ss_pred HHHHHHHHHHHHHHHH-h--hcCCC----CCCCCC--CccccccccchhHHHHHHHH-HHHHHhhhcchhhhhhhhhccc
Q 021653 94 IASIIYQIGMICLTIS-A--ILPQL----RPPPCE--GEQVCQEANKGQVAILYVSL-LLAALGSGGIRPCVVAFGADQF 163 (309)
Q Consensus 94 i~~~l~~~g~~~~~~~-~--~~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~-~l~gig~g~~~~~~~~~~ad~~ 163 (309)
.++.+......+.... . +.|-. ....|. .+.=|......+...++.+. ++.|++.-.+.....+.-+++.
T Consensus 338 ~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiL 417 (488)
T KOG2325|consen 338 LGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKIL 417 (488)
T ss_pred ehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHh
Confidence 5433333322222211 0 01111 112232 23557777777777777665 4567777777888888899999
Q ss_pred CCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHH
Q 021653 164 DETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSI 220 (309)
Q Consensus 164 ~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~ 220 (309)
.+. ..+..-+++.....++..++|++...+-...|.++.+.+.+...++..
T Consensus 418 gp~------~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~ 468 (488)
T KOG2325|consen 418 GPR------DQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVA 468 (488)
T ss_pred CCc------cccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHH
Confidence 887 477777888888889999999988888777787776666555544433
No 256
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=95.78 E-value=0.33 Score=46.49 Aligned_cols=142 Identities=15% Similarity=0.029 Sum_probs=87.3
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhccchH-------HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHH
Q 021653 63 TLTNFGGTGSLTPLIGAFVADAYAGRF-------WTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVA 135 (309)
Q Consensus 63 ~~~~~~~~~~~~~l~~G~laD~~~GR~-------~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (309)
..+.-.+...+.+++..++--+. |++ .-+-++.+++..+.+++......- -+.+...+.+
T Consensus 329 fQslNp~~Iii~~pI~a~l~~~l-~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~------------~~~~~~~s~~ 395 (498)
T COG3104 329 FQSLNPFFIILFSPILAALWTKL-GRGNKQPSTPIKFALGLILAGLGFLILLLAGIWF------------GGPSGLVSVW 395 (498)
T ss_pred HHhhCHHHHHHHHHHHHHHHhHh-hcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhh------------cCCCCCcCHH
Confidence 34444444445555556665552 333 123345555555655555542000 0002334778
Q ss_pred HHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH------hhccccchhhh
Q 021653 136 ILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVY------IQDNIGWGWGL 209 (309)
Q Consensus 136 ~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~------i~~~~gw~~~f 209 (309)
+++.+.+++++|.=+.+++...+.+...|+. -.+..++.+.+....|..++-.+.+. ..+.......|
T Consensus 396 ~lil~y~l~s~gEL~iSpvGLs~~t~laP~~------~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F 469 (498)
T COG3104 396 WLVLSYVLQSFGELFISPVGLSMVTKLAPPA------LKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVF 469 (498)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHhChHH------HHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhH
Confidence 8888899999999999999999999999986 68888888888888888877666552 12223344556
Q ss_pred hHHHHHHHHHHHHH
Q 021653 210 GIPTFAMFLSIIAF 223 (309)
Q Consensus 210 ~i~~~~~~~~~~~~ 223 (309)
+..+...++..+.+
T Consensus 470 ~~~g~v~i~~~~~~ 483 (498)
T COG3104 470 GTIGVVAIVIGILL 483 (498)
T ss_pred HHHHHHHHHHHHHH
Confidence 66555544443333
No 257
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=95.48 E-value=0.036 Score=53.43 Aligned_cols=66 Identities=15% Similarity=0.217 Sum_probs=50.9
Q ss_pred hhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHH-HHHHHH
Q 021653 40 GFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI-GMICLT 107 (309)
Q Consensus 40 ~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~-g~~~~~ 107 (309)
.+...++.|+ .++|+++++.+.++.+--+..++++++.|++|||| -++|-++++..+..+ ..+++.
T Consensus 29 ~l~pll~vy~-kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~-r~~r~lllgsl~~~v~a~fll~ 95 (618)
T KOG3762|consen 29 SLFPLLAVYF-KQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRY-RKRRPLLLGSLLLSVTATFLLV 95 (618)
T ss_pred ccchHHHHHH-HHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHH-HhcCchhHHHHHHHHHHHHhee
Confidence 4556677777 58999999999999999999999999999999998 655555555554443 334443
No 258
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=95.47 E-value=0.31 Score=48.93 Aligned_cols=183 Identities=11% Similarity=-0.076 Sum_probs=124.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchh
Q 021653 54 HMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQ 133 (309)
Q Consensus 54 ~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (309)
+..........+++.....+..+.....+|-.-|+...+..-.+..+++.+...+.. ++. .+....
T Consensus 16 ~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~lla-i~a-------------~~~~~~ 81 (654)
T TIGR00926 16 NFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLS-FGA-------------IPSSGH 81 (654)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-hcc-------------Cccccc
Confidence 344456677888999999999999999999987677777777777777777776655 211 012122
Q ss_pred HHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcccc-chh-----
Q 021653 134 VAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIG-WGW----- 207 (309)
Q Consensus 134 ~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~g-w~~----- 207 (309)
.....++.+.+.++.++.-++.+.+.+++.+.-+ .+++.+..++|++..+.+.+. .+++..+..... +..
T Consensus 82 ~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~---~~~~~~~~s~F~~fY~~iNiG-Slis~~i~~~l~~~~~~fg~~ 157 (654)
T TIGR00926 82 PLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFE---ERQLSLRSRFFSFFYFAINAG-SLISTIITPILRGDVGCFGCQ 157 (654)
T ss_pred chHHHHHHHHHHHHHhhccccccCchhhhHhhcC---ccchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcccccC
Confidence 3445667778899999999999999999998752 445668999999999988765 556666665443 332
Q ss_pred -hhh-HHHHHHHHHHHHHHHhCcceeccCCCCChhHHHHHHHHHHHHcC
Q 021653 208 -GLG-IPTFAMFLSIIAFLIGYPLYRNLDPAGSPFTRLLQVCVAAFRKR 254 (309)
Q Consensus 208 -~f~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (309)
+|. ..++..++.++.+......++..++.+.....+.++........
T Consensus 158 ~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~ 206 (654)
T TIGR00926 158 DCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTAL 206 (654)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHH
Confidence 233 44445555555666666666666666655555666655554444
No 259
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.42 E-value=0.34 Score=46.35 Aligned_cols=99 Identities=10% Similarity=0.155 Sum_probs=72.8
Q ss_pred HHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHH
Q 021653 64 LTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLL 143 (309)
Q Consensus 64 ~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 143 (309)
.++......+..++++.+-|.. |.|+.+.++...+..-.+..... +.+.+|.+-.+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i-~~K~~lv~ga~~y~~f~~gfl~~-----------------------N~y~~yfssal 111 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFL-GPKWALVIGATCYAAFPLGFLFP-----------------------NSYYLYFSSAL 111 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHh-hHHHHHHHHhHHHHHHHHHHHhc-----------------------chHHHHHHHHH
Confidence 5566777778889999999995 99999999988776543333221 56778899999
Q ss_pred HHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHH
Q 021653 144 AALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVA 192 (309)
Q Consensus 144 ~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~ 192 (309)
.|+|.+..+.-.-.+++|....+ .+.+-.+..+...+.+.++|
T Consensus 112 lG~Gaallw~GqG~ylt~~st~~------tie~Nisi~Wai~~~~li~G 154 (461)
T KOG3098|consen 112 LGFGAALLWTGQGGYLTSNSTRE------TIERNISIFWAIGQSSLIIG 154 (461)
T ss_pred hhhhHHheecccceehhhcCChh------hHHHHHHHHHHHHHHHHHhh
Confidence 99999999988888888887766 45555555544444444444
No 260
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.41 E-value=0.96 Score=43.34 Aligned_cols=115 Identities=18% Similarity=0.126 Sum_probs=69.7
Q ss_pred HHHHHHhHHHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHH
Q 021653 67 FGGTGSLTPLIGAFVADAY--AGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLA 144 (309)
Q Consensus 67 ~~~~~~~~~l~~G~laD~~--~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 144 (309)
...+..++.++.+.+++|. +||++++.++..+..++.++..+.. |...|-.- . ..-+...+.+.....+--++.
T Consensus 288 ~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~--p~dap~~~-t-~~~~~~~~~~~~~~~ii~~l~ 363 (461)
T KOG3098|consen 288 IGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSF--PNDAPLRP-T-DSPPLLFTPSYYLALIIGFLL 363 (461)
T ss_pred HhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccc--cccCCCCC-C-cccccccccchhHHHHHHHHH
Confidence 3444455666677777552 5999999999999998888777654 21111000 0 000001111333444445788
Q ss_pred HHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHH
Q 021653 145 ALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVA 192 (309)
Q Consensus 145 gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~ 192 (309)
|+|-++..+....++++.+|.+ |...++.+-+-..+++.++
T Consensus 364 G~~D~~~~t~~~~ii~~~~~~~-------~~~~fsi~kfyq~~~s~v~ 404 (461)
T KOG3098|consen 364 GFGDACFNTQRYVIIALLYPDD-------RAQAFSLFKFYQSVASCVA 404 (461)
T ss_pred hhHHHHHHHHHHHHHHHHhcCc-------hHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999654 5555555544444444443
No 261
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=95.38 E-value=0.54 Score=43.81 Aligned_cols=158 Identities=14% Similarity=0.041 Sum_probs=93.0
Q ss_pred cCCCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHH-----hccchHHH
Q 021653 17 QKGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVAD-----AYAGRFWT 91 (309)
Q Consensus 17 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD-----~~~GR~~~ 91 (309)
.|+..+.+.++++..+++..- +|....+|..++ .-|.|-++.+..... .--+-.-++.+++-| | +||||.
T Consensus 26 ~~~d~~~illLl~LYllQGiP-~GL~~~iP~lL~-ak~vSyt~~a~fS~a--y~P~sLKllWaPiVDs~y~k~-~Grrks 100 (510)
T KOG3574|consen 26 LKGDRSSILLLLFLYLLQGIP-LGLIGAIPLLLQ-AKGVSYTSQAIFSFA--YWPFSLKLLWAPIVDSVYSKR-FGRRKS 100 (510)
T ss_pred hhhhhhhHHHHHHHHHHcCCc-hhHhhhhHHHhc-CCCcchhhhhhhhhh--hhHHHHHHHHHhhhHHHHHHh-hccccc
Confidence 466677888888887777654 455555555554 556666665433222 122334568888889 7 599998
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhh
Q 021653 92 ITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQA 171 (309)
Q Consensus 92 i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~ 171 (309)
.++=+ -+.+|..+..++...+.... ..+.. .+........++.-++.+.....+-...-.+..++
T Consensus 101 Wvvp~-q~llG~~mllLs~~v~~~~g-------~ng~~--p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e----- 165 (510)
T KOG3574|consen 101 WVVPC-QYLLGLFMLLLSYLVDRGLG-------GNGGL--PNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRE----- 165 (510)
T ss_pred eeeeh-HHHHHHHHHHHhhCCCcccc-------cCCCC--cchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHh-----
Confidence 87655 35667777777763332211 01111 12222323334555555555556666655555554
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHH
Q 021653 172 TKTWKYFNWYYFVMGAAILVAVTV 195 (309)
Q Consensus 172 ~~r~~~~~~~~~~~~iG~~l~~~~ 195 (309)
+.|-+......+.+.|.+++..+
T Consensus 166 -~lgyaST~q~Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 166 -NLGYASTCQSVGQTAGYFLGNVV 188 (510)
T ss_pred -hcCchhHHHHHHHhhhHHhhcce
Confidence 56666667777888888887665
No 262
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=93.94 E-value=0.58 Score=43.99 Aligned_cols=123 Identities=18% Similarity=0.190 Sum_probs=72.3
Q ss_pred HHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHh
Q 021653 68 GGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALG 147 (309)
Q Consensus 68 ~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig 147 (309)
.+-..+.-+++-+.-+|. --+.=+.+..++..+|.++.+++. +.++-++|.++.+++
T Consensus 69 i~P~l~~Kl~aP~fi~~v-~y~~Ri~~~~~l~~~g~l~va~~~----------------------~v~~~l~Gv~las~s 125 (402)
T PF02487_consen 69 ILPSLLVKLIAPFFIHRV-PYWIRILICVALSAAGMLLVAFSP----------------------SVWVRLLGVVLASLS 125 (402)
T ss_pred HHHHHHHHHHhHhhhhhc-cchHHHHHHHHHHHHHHhheeecc----------------------chhHHHHHHHHHhhh
Confidence 334445556667777774 322223444556777777777665 666777888999999
Q ss_pred hhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccccc--hhhhhHHHHHHHHHHHHHHH
Q 021653 148 SGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGW--GWGLGIPTFAMFLSIIAFLI 225 (309)
Q Consensus 148 ~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~gw--~~~f~i~~~~~~~~~~~~~~ 225 (309)
.|........+.+ -+++. ..+.|..+...++++|...-..+.+ .|+ |..+.+...+.++-.+.++.
T Consensus 126 sg~GE~tfL~lt~-~y~~~----------~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~ 193 (402)
T PF02487_consen 126 SGLGEVTFLSLTH-FYGKS----------SLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFF 193 (402)
T ss_pred hhhhHHHHHHHHH-hcCcc----------ccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 9998877777644 45543 1344555556666666554333333 444 55666655554443334433
No 263
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=93.85 E-value=6.3 Score=37.61 Aligned_cols=187 Identities=9% Similarity=-0.097 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Q 021653 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (309)
Q Consensus 24 ~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~ 103 (309)
.+.+....++.++..=.+.--.+.|+.+-+.-+.--.+.....-.+...++.+..|..-||. -|.+++..+.+..-+..
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~sv 82 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNLSV 82 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHHHH
Confidence 34455555665555544444567777766554554445445555666677778888999996 99998887766554433
Q ss_pred HHHHHH----hhcCCCCCCCCCCccccccccchhHHHHHH-HHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHH
Q 021653 104 ICLTIS----AILPQLRPPPCEGEQVCQEANKGQVAILYV-SLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (309)
Q Consensus 104 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~ 178 (309)
+..+.. -..+.. ...++.....+++ ..++.++.-=+......+.--|+...-..+++..+...-
T Consensus 83 ~~s~~~~~~l~~~~~~-----------~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~N 151 (432)
T PF06963_consen 83 AASCALFLLLLSYPSS-----------SSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMN 151 (432)
T ss_pred HHHHHHHHHHHhCCcc-----------ccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHH
Confidence 322211 100100 0000111222222 222222222111222222333443322111122344444
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHH
Q 021653 179 NWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (309)
Q Consensus 179 ~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~ 222 (309)
+..-=.=-+.-+++|++.|.+.+..+...+.++.++..++++.+
T Consensus 152 A~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 152 ATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFV 195 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHH
Confidence 43322223456788999999988888887777766666666554
No 264
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=93.72 E-value=0.32 Score=46.22 Aligned_cols=135 Identities=12% Similarity=0.019 Sum_probs=73.1
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchH----HHHHHHHHHHHHHHHHHHHHhh-cCCCCCCCCCCccc
Q 021653 51 TQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRF----WTITIASIIYQIGMICLTISAI-LPQLRPPPCEGEQV 125 (309)
Q Consensus 51 ~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~----~~i~i~~~l~~~g~~~~~~~~~-~~~~~~~~~~~~~~ 125 (309)
+-.|.+..+......++..+..+|.++||.++|++ -|. .+..+.-+....|.......-. +|.
T Consensus 276 ~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~-~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~----------- 343 (493)
T KOG1330|consen 276 ELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKL-SRIFPNSGTLRASQLSAALGAPLSIPFLFLFPA----------- 343 (493)
T ss_pred HHhCCccccchhhhhHHHhhchhhheehHHHHHHH-HHhcccccchhHHHHHHhhhhhHHHHHHHHHHh-----------
Confidence 33456777777788889999999999999999993 221 2222222222222211110000 000
Q ss_pred cccccchhHHHHHHHHHHHHHh-hhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHH-HHHHHHHHHHHHHhhccc
Q 021653 126 CQEANKGQVAILYVSLLLAALG-SGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM-GAAILVAVTVLVYIQDNI 203 (309)
Q Consensus 126 ~~~~~~~~~~~~~~~~~l~gig-~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~-~iG~~l~~~~~~~i~~~~ 203 (309)
.......+...+++.|+- .-..++.......|..|++ +|...+++..... .+|..-+|.+.|.+++..
T Consensus 344 ----~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~------~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l 413 (493)
T KOG1330|consen 344 ----FTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPS------RRTTAYALDTVFEHIFGDAASPYIVGILSDKL 413 (493)
T ss_pred ----hhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcc------cccHHHHHHHHHHHHhccCCCcceehhHHHHh
Confidence 000111122222223322 2223455556667888887 7888888876544 445555666778887753
Q ss_pred -cchh
Q 021653 204 -GWGW 207 (309)
Q Consensus 204 -gw~~ 207 (309)
||+.
T Consensus 414 ~g~~~ 418 (493)
T KOG1330|consen 414 RGYKP 418 (493)
T ss_pred hCCCc
Confidence 6663
No 265
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=93.69 E-value=1.4 Score=40.18 Aligned_cols=147 Identities=10% Similarity=0.053 Sum_probs=79.3
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHH
Q 021653 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI 97 (309)
Q Consensus 18 ~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~ 97 (309)
++-.|..+.+-. .++..+..|.-..++......+++.. ..+++- ......+++.+.+-.+ +|-|+++.++..
T Consensus 25 ~~~~knv~i~s~-~fl~~f~a~~gl~nlq~~vn~~lg~~--sl~~~y----~~l~~s~m~~~~~Ir~-~g~K~tm~lav~ 96 (390)
T KOG3097|consen 25 LGILKNVLILSI-AFLLTFTAYLGLQNLQTSVNYDLGTV--SLGALY----LSLIDSSMFMPLLIRF-LGTKWTMVLAVF 96 (390)
T ss_pred cchhhhhhHHHH-HHHHHHHHHHHHHHHHHHHhcCcccc--hhhhhh----HHHHHHHHHHHHHHHH-HhhHHHHHHHHH
Confidence 334455554444 44444555555566766655444322 222221 1222233444466666 599999988776
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhh-------
Q 021653 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQ------- 170 (309)
Q Consensus 98 l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~------- 170 (309)
.+..- ...+..| .+..++-+-.+.|+|.+..++.-..|+++.-..+.++.
T Consensus 97 ~Y~ly----iA~Nl~p-------------------r~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~~q~~~~ 153 (390)
T KOG3097|consen 97 PYALY----IAANLEP-------------------RYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRGEQAGDG 153 (390)
T ss_pred HHHHH----HHhhcch-------------------hHHhhccHHHhhccccccccccCcceecHHHHHHHHhhhhhccCc
Confidence 55432 2222111 44556666788899999999888888877665443211
Q ss_pred --hhhhhHHHHHHHHHHHHHHHHHHHH
Q 021653 171 --ATKTWKYFNWYYFVMGAAILVAVTV 195 (309)
Q Consensus 171 --~~~r~~~~~~~~~~~~iG~~l~~~~ 195 (309)
.+.-+-++.+++...-.|..++..+
T Consensus 154 ~~~~ffg~Ffii~~~~qv~gn~issli 180 (390)
T KOG3097|consen 154 MKVRFFGEFFIIFQCAQVWGNLISSLI 180 (390)
T ss_pred eeeeehhHHHHHHHHHHHHHHHHHHHH
Confidence 1122445555555555565555544
No 266
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=92.67 E-value=2.3 Score=38.00 Aligned_cols=140 Identities=10% Similarity=0.057 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhccch--HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHH
Q 021653 61 ANTLTNFGGTGSLTPLIGAFVADAYAGR--FWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILY 138 (309)
Q Consensus 61 ~~~~~~~~~~~~~~~l~~G~laD~~~GR--~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (309)
+.+.+.+.....+|+-+...+..+- .. ...+.+..++.+....+..+..+ .+|+..++..-+
T Consensus 285 GfiFatFMlASmLGSSla~Rl~s~s-~~~ve~ymqivf~vs~a~l~Lpilt~~---------------vsP~kes~~~s~ 348 (454)
T KOG4332|consen 285 GFIFATFMLASMLGSSLASRLLSRS-SPKVESYMQIVFLVSIAALLLPILTSS---------------VSPSKESPSESL 348 (454)
T ss_pred hhHHHHHHHHHHHhhHHHHHHHhcC-CcccchHHHHHHHHHHHHHHHHHHHhc---------------cCCCcCCchHHH
Confidence 6677777777777776666655542 11 12344444333333322222221 112334555557
Q ss_pred HHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHH
Q 021653 139 VSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFL 218 (309)
Q Consensus 139 ~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~ 218 (309)
++..+.-...|..+|.+.-+=....|++ .|++.++|+-.-.++-.-++......-....+-|..|.++.+...+
T Consensus 349 i~F~~~E~cvGlfwPSimkmRsqyIPEe------arstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~ 422 (454)
T KOG4332|consen 349 IGFCLFEACVGLFWPSIMKMRSQYIPEE------ARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFV 422 (454)
T ss_pred HHHHHHHHHHhhcchHHHHHHHhhCCHH------HHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHH
Confidence 7777888889999999988888888877 7999999987766655443322111111124567889888887776
Q ss_pred HHHH
Q 021653 219 SIIA 222 (309)
Q Consensus 219 ~~~~ 222 (309)
+.+.
T Consensus 423 a~i~ 426 (454)
T KOG4332|consen 423 ASIL 426 (454)
T ss_pred HHHH
Confidence 6544
No 267
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=89.78 E-value=10 Score=35.73 Aligned_cols=63 Identities=11% Similarity=0.010 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 021653 133 QVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD 201 (309)
Q Consensus 133 ~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~ 201 (309)
+.+..++..+..|+..|+.+.+....+.|..+++ +|....+....+-++|..++.+++-++++
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~------~REFslg~vsvsds~GI~lAgll~l~le~ 396 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPE------DREFSLGAVSVSDSLGILLAGLLGLPLEP 396 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHH------HHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 4566666677889999999999998888877765 67777787777888888777766655543
No 268
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=89.41 E-value=21 Score=34.46 Aligned_cols=71 Identities=10% Similarity=0.076 Sum_probs=53.8
Q ss_pred HHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHH
Q 021653 143 LAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFL 218 (309)
Q Consensus 143 l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~ 218 (309)
+.++........-...+.+++|... +|+.+++-++...++.+++...+.+.+.+..||..+-.+..++.++
T Consensus 275 ~y~~~~nlve~~~k~~v~~~~p~~~-----~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 275 AYGISINLVEVTWKSKLKAQYPSPN-----EYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3455556666777778888888654 7899999999888888877666668999999999777665555544
No 269
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=87.92 E-value=2.2 Score=40.61 Aligned_cols=57 Identities=9% Similarity=-0.022 Sum_probs=40.4
Q ss_pred HHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 021653 142 LLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIG 204 (309)
Q Consensus 142 ~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~g 204 (309)
++..+..+...-+...+.+|..|+. .-|+.++......|+|..++..++..+.+..+
T Consensus 326 ~l~~~~~~i~~mP~lvl~a~lcP~G------~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 326 ILEEVIGMIAFMPSLVLAARLCPKG------SEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCC------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3444444445556667889999987 57888888888888888888877777665443
No 270
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=81.23 E-value=20 Score=26.69 Aligned_cols=44 Identities=16% Similarity=0.117 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Q 021653 60 AANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMI 104 (309)
Q Consensus 60 ~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~ 104 (309)
.+........+..+++.+.|++.|.. |.+..+.+...+..++.+
T Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 132 (141)
T TIGR00880 89 LGLMSAGIALGPLLGPPLGGVLAQFL-GWRAPFLFLAILALAAFI 132 (141)
T ss_pred HHHHHHhHHHHHHHhHHhHHHHhccc-chHHHHHHHHHHHHHHHH
Confidence 34455566788888889999999985 877777666555544433
No 271
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=77.84 E-value=4.1 Score=38.93 Aligned_cols=87 Identities=8% Similarity=-0.086 Sum_probs=50.8
Q ss_pred CccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHh-cCCCH-----HHH-----------HHHHHHHHHHHHhHHHHHHHHH
Q 021653 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQ-LHMPL-----TKA-----------ANTLTNFGGTGSLTPLIGAFVA 82 (309)
Q Consensus 20 ~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~-~~~s~-----~~~-----------~~~~~~~~~~~~~~~l~~G~la 82 (309)
-.|.++.++...++..++++...-+...++-++ ++-++ +++ .+-..+......+.+.+.-++.
T Consensus 277 mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~ 356 (498)
T KOG0637|consen 277 MPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLS 356 (498)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 456778888888888887766555555554322 22111 111 2223445666677788899999
Q ss_pred HhccchHHHHHHHHHHHHHHHHHHH
Q 021653 83 DAYAGRFWTITIASIIYQIGMICLT 107 (309)
Q Consensus 83 D~~~GR~~~i~i~~~l~~~g~~~~~ 107 (309)
|++ |-|+.++.+...+.++..+..
T Consensus 357 ~~~-g~r~~y~~~~~~f~~~~~~~g 380 (498)
T KOG0637|consen 357 RKF-GTRKRYWGGVNAFGLATGLAG 380 (498)
T ss_pred Hhc-CcceEEeehhHHHHHHHHHHh
Confidence 996 855555555544444444333
No 272
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=77.09 E-value=4.6 Score=29.39 Aligned_cols=56 Identities=14% Similarity=0.229 Sum_probs=33.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHhCcceec
Q 021653 174 TWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYRN 232 (309)
Q Consensus 174 r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~ 232 (309)
....=.++++...+|+++|.+. |+.++.++|. ..+..+..++.+++.++-.|.|++
T Consensus 21 QkkaEr~~q~ilti~aiVg~i~-Gf~~Qqls~t--vy~vg~~~v~t~li~LPpwP~y~r 76 (101)
T KOG4112|consen 21 QKKAERFQQLILTIGAIVGFIY-GFAQQQLSVT--VYIVGAGFVFTLLITLPPWPWYRR 76 (101)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH--HHHHHHHHHHHHHhcCCCchhhhc
Confidence 4445567888899999988554 5555656664 333334444455555555566654
No 273
>PRK10263 DNA translocase FtsK; Provisional
Probab=76.19 E-value=17 Score=39.31 Aligned_cols=34 Identities=6% Similarity=-0.108 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHhhccccchhhhhHHHHHHHHHH
Q 021653 187 AAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSI 220 (309)
Q Consensus 187 iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~ 220 (309)
.|+++|..+...+...+|..-..++..++.++++
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~LILLlllLIGL 175 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGL 175 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4666666666666655555434444444443343
No 274
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=75.67 E-value=16 Score=34.39 Aligned_cols=107 Identities=8% Similarity=-0.003 Sum_probs=60.8
Q ss_pred HHHHHhHHhcCCC---HHHHHHHHHH-HHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 021653 44 NMISYLTTQLHMP---LTKAANTLTN-FGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPP 119 (309)
Q Consensus 44 ~l~~yl~~~~~~s---~~~~~~~~~~-~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~ 119 (309)
..|.+..+..+-. .--...++.. ++....+|.+...++-++ +||+..+.... -.+-.-+.......| .
T Consensus 265 iFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~i~v~l-R~lfiPlF~~cn~~~-~---- 336 (406)
T KOG1479|consen 265 IFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWP--DPRKLTIPVLL-RLLFIPLFLLCNYPP-L---- 336 (406)
T ss_pred ecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCC--CCceehHHHHH-HHHHHHHHHHhccCC-C----
Confidence 5677776554222 2223334444 777888887777777665 56655444333 221112222111111 0
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCC
Q 021653 120 CEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDET 166 (309)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~ 166 (309)
...-.+.+.+.....+.|+..|-..++...+..++.+++
T Consensus 337 --------~v~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~ 375 (406)
T KOG1479|consen 337 --------PVVFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPS 375 (406)
T ss_pred --------CceecCchHHHHHHHHHHhccchHhhheehhcCCCCChH
Confidence 001124566777778899999999999999988887766
No 275
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=75.22 E-value=76 Score=30.03 Aligned_cols=33 Identities=9% Similarity=0.182 Sum_probs=22.5
Q ss_pred hHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCC
Q 021653 133 QVAILYVSLLLAALGSGGIRPCVVAFGADQFDET 166 (309)
Q Consensus 133 ~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~ 166 (309)
......+..++.+.+.|..+.......++ +|.+
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ 148 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSE 148 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHH
Confidence 34444555677788888888888877666 5654
No 276
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=75.16 E-value=12 Score=36.99 Aligned_cols=96 Identities=11% Similarity=0.013 Sum_probs=67.9
Q ss_pred chhHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccc----cch
Q 021653 131 KGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNI----GWG 206 (309)
Q Consensus 131 ~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~----gw~ 206 (309)
+.+..+++--.+++|+|.........-+-=+|+|++ -|+...+++.....+|..++..+...+.... +|-
T Consensus 455 ~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~s------MkS~~~al~l~t~a~G~~lss~Lv~~v~~~t~~~~~w~ 528 (571)
T KOG1237|consen 455 PMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPES------MKSVATALWLLTVAVGNYLSSVLVSLVQFSTGKAAEWL 528 (571)
T ss_pred CeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccC
Confidence 346666666678889999998888888888999988 7999999999999999999988876555433 343
Q ss_pred h-----------hhhHHHHHHHHHHHHHHHhCcceec
Q 021653 207 W-----------GLGIPTFAMFLSIIAFLIGYPLYRN 232 (309)
Q Consensus 207 ~-----------~f~i~~~~~~~~~~~~~~~~~~~~~ 232 (309)
. -+|+.+....+....+.....+|..
T Consensus 529 ~~~~ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~y~~ 565 (571)
T KOG1237|consen 529 GFANLNKGRLDYFYWLLAVYSAVNFLYFLICAKRYDY 565 (571)
T ss_pred ChhHhhhhHHHHHHHHHHHHHhhhhhheEEEEEeeee
Confidence 2 2334444444445555555555543
No 277
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=74.54 E-value=16 Score=27.54 Aligned_cols=30 Identities=20% Similarity=0.077 Sum_probs=19.5
Q ss_pred HHHHhHHHHHHHHHHhccchHHHHHHHHHH
Q 021653 69 GTGSLTPLIGAFVADAYAGRFWTITIASII 98 (309)
Q Consensus 69 ~~~~~~~l~~G~laD~~~GR~~~i~i~~~l 98 (309)
+...+.....||+.|+|+|-.+--+|..++
T Consensus 53 IsGilVGa~iG~llD~~agTsPwglIv~ll 82 (116)
T COG5336 53 ISGILVGAGIGWLLDKFAGTSPWGLIVFLL 82 (116)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 333444466799999999988655444433
No 278
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=73.88 E-value=43 Score=32.62 Aligned_cols=93 Identities=17% Similarity=0.122 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHH
Q 021653 61 ANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVS 140 (309)
Q Consensus 61 ~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (309)
|..-++......+.++..|++-.++ .|.--+.++.+..+-|.+++..+. +.+.+.-|++
T Consensus 301 G~veA~~tllga~~a~~ag~~~~~w-~~~~~l~l~v~s~~~~gll~~m~~--------------------t~~Iw~~Y~~ 359 (511)
T TIGR00806 301 GAVDAASTLLGAITSFIAGFVNIRW-ARWSKLLIAVVSAIQAGLVFWMSQ--------------------SHDIWVLYVT 359 (511)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCCc-hhhHHHHHHHHHHHHHHHhhhhhc--------------------ccchHHHHHH
Confidence 3444556666777888899987774 554445555443333333322222 2388888999
Q ss_pred HHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHH
Q 021653 141 LLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (309)
Q Consensus 141 ~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 180 (309)
-++.+.......+....-++.....+ ..+..|++
T Consensus 360 yvlf~~~y~flitia~~~iA~~L~~~------~~aLvFGi 393 (511)
T TIGR00806 360 YVLFRGIYQFLVPIATFQIASSLSKE------LCALVFGI 393 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccc------ceEEEEec
Confidence 88888888888888777777777665 45666665
No 279
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=72.27 E-value=69 Score=30.62 Aligned_cols=57 Identities=11% Similarity=0.103 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 021653 133 QVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTV 195 (309)
Q Consensus 133 ~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~ 195 (309)
+-+..++..++.|+..|-..+....+..+..+++ +|.....+..++.++|-.+|..+
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~------e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPH------EREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455556678889999999988888888886654 44444445555555665555443
No 280
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=71.68 E-value=96 Score=29.64 Aligned_cols=33 Identities=12% Similarity=0.184 Sum_probs=23.8
Q ss_pred hHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCC
Q 021653 133 QVAILYVSLLLAALGSGGIRPCVVAFGADQFDET 166 (309)
Q Consensus 133 ~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~ 166 (309)
..+..++..++.|++.|..++...++.+ .+|++
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~ 137 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST 137 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH
Confidence 4555566667789999998888888766 56753
No 281
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=70.18 E-value=1.1e+02 Score=29.77 Aligned_cols=158 Identities=10% Similarity=0.214 Sum_probs=88.0
Q ss_pred CCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccch-----------HH--HH-HHHHHHHHHHHHHHHHHhhcC--CCCCC
Q 021653 55 MPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGR-----------FW--TI-TIASIIYQIGMICLTISAILP--QLRPP 118 (309)
Q Consensus 55 ~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR-----------~~--~i-~i~~~l~~~g~~~~~~~~~~~--~~~~~ 118 (309)
.+..|+.-....+..++.++.+++|.+.-.+ .+ .+ .+ ....++.+.|.+.+.....+. .+..+
T Consensus 173 tt~~eAKRfYpl~g~ganigli~sG~~~~~~-~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~ 251 (491)
T PF03219_consen 173 TTVEEAKRFYPLFGLGANIGLIFSGQLTSYF-SSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDP 251 (491)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcc
Confidence 4567888888899999999999888877553 54 01 11 112222233333333222111 11111
Q ss_pred CC-C-----Cccccccccch-------hHHHHHHHH--HHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHH
Q 021653 119 PC-E-----GEQVCQEANKG-------QVAILYVSL--LLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (309)
Q Consensus 119 ~~-~-----~~~~~~~~~~~-------~~~~~~~~~--~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~ 183 (309)
.+ . .+..-+..-.. +..+..++. +..++........--..+.+++|+.. .+..+++-++.
T Consensus 252 ~~~~~~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~-----~ysafmG~~~~ 326 (491)
T PF03219_consen 252 RFYPSAKKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPN-----DYSAFMGKFSS 326 (491)
T ss_pred ccchhhhcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCch-----HHHHHHHHHHH
Confidence 12 0 00000000001 122222222 33456666667777777788888764 68888888877
Q ss_pred HHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHH
Q 021653 184 VMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFL 218 (309)
Q Consensus 184 ~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~ 218 (309)
..++-+.+-..+++.+.+..||+.+-.+.-++.++
T Consensus 327 ~tGivtii~~~l~~~iir~~GW~~~AlitPiv~li 361 (491)
T PF03219_consen 327 WTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILI 361 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHH
Confidence 77776666667778888999999777665444443
No 282
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=69.95 E-value=1.1e+02 Score=29.72 Aligned_cols=169 Identities=10% Similarity=0.025 Sum_probs=93.2
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhhHHHHHHHhHHhcCCC---HHHHHHHHHHHHH-HHHhHHHHHHHHHHhccchHHHHH
Q 021653 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMP---LTKAANTLTNFGG-TGSLTPLIGAFVADAYAGRFWTIT 93 (309)
Q Consensus 18 ~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~yl~~~~~~s---~~~~~~~~~~~~~-~~~~~~l~~G~laD~~~GR~~~i~ 93 (309)
|.-|+....+.+..++-.+.++... -+.+.+-++ +.....+-+.... .+.+..++-+++.+++ -|.++..
T Consensus 23 r~E~~kflpl~Ll~f~I~~ny~~lR-----~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~vF~ 96 (509)
T COG3202 23 RYELKKFLPLALLFFCILFNYNLLR-----SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKVFY 96 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHHHH
Confidence 4456677766676666666543222 233444433 2333334444444 5667778899999996 9999888
Q ss_pred HHHHHHHHHHHHHHHHhhcCCC---CCCCCC-Cccccccc----------cchhHHHHHHHHHHHHHhhhcchhhhhhhh
Q 021653 94 IASIIYQIGMICLTISAILPQL---RPPPCE-GEQVCQEA----------NKGQVAILYVSLLLAALGSGGIRPCVVAFG 159 (309)
Q Consensus 94 i~~~l~~~g~~~~~~~~~~~~~---~~~~~~-~~~~~~~~----------~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ 159 (309)
+-+..+....+++++.- .|.- ++.+.- .+-....| +..+...+|+.-=+ .|.=..+-.-..+.
T Consensus 97 ~~~~~F~~fF~LFa~Vi-~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aEL--WgslV~S~lFw~fa 173 (509)
T COG3202 97 IILGFFLGFFALFAFVI-YPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAEL--WGSLVLSLLFWQFA 173 (509)
T ss_pred HHHHHHHHHHHHHHHHH-hccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHH--HHHHHHHHHHHHHH
Confidence 77776666666666544 2210 000000 00000001 11233333322111 11111112344566
Q ss_pred hcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 021653 160 ADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD 201 (309)
Q Consensus 160 ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~ 201 (309)
.|+...+ +-.+++..++...|++.+++..+..+...
T Consensus 174 Neitt~~------eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 174 NEITTIE------EAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHhhhHH------HhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7877766 78999999999999999998888877765
No 283
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=68.02 E-value=1.2e+02 Score=29.46 Aligned_cols=121 Identities=12% Similarity=0.125 Sum_probs=66.7
Q ss_pred HHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCC---CCCCCC-CCccccccccc----------hhHH
Q 021653 70 TGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQ---LRPPPC-EGEQVCQEANK----------GQVA 135 (309)
Q Consensus 70 ~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~----------~~~~ 135 (309)
.+.+..++-.+++|++ +|.+...+....+..-..+.++.- .|. +++++- +...... +.+ ....
T Consensus 71 ~a~~f~~~y~kl~n~~-s~~~lFy~~~~~F~~fF~~f~~vl-yP~~~~lhp~~~~~~~~~~~-~~~~~~~i~~~~~Wt~s 147 (491)
T PF03219_consen 71 VAILFTILYSKLSNRL-SREKLFYIIIIPFLGFFALFAFVL-YPNRDILHPDAFADKLLAIL-PPGFKGFIAMFRNWTFS 147 (491)
T ss_pred HHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHHHH-hhchhhcCCCHHHHHhhhhc-cchHHHHHHHHHHHHHH
Confidence 4455567789999996 999987766655554444444332 221 111100 0000000 000 1112
Q ss_pred HHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 021653 136 ILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD 201 (309)
Q Consensus 136 ~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~ 201 (309)
++|+.-=+ .|.-...-.-..+..|.+..+ +-.+++..+..+.|+|.+++..+..++.+
T Consensus 148 lfYv~aEl--wgsvvlSlLFW~fAN~itt~~------eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 148 LFYVMAEL--WGSVVLSLLFWGFANEITTVE------EAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHhcCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222111 111111223466778888876 78899999999999999998887776665
No 284
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=67.90 E-value=6.5 Score=34.95 Aligned_cols=60 Identities=15% Similarity=0.179 Sum_probs=44.3
Q ss_pred HHHHHHHHHhhHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHH---------HhccchHHHH
Q 021653 31 EVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVA---------DAYAGRFWTI 92 (309)
Q Consensus 31 ~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~la---------D~~~GR~~~i 92 (309)
.+........+.+++..|++ +.+.++.+.+.++..-..+-++..++.|..+ ||+ |||+..
T Consensus 26 HmlNDitAScWFTYlllflt-qiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~-G~~~~w 94 (412)
T KOG4830|consen 26 HMLNDITASCWFTYLLLFLT-QIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRI-GRRMSW 94 (412)
T ss_pred HHHhhHHHHHHHHHHHHHHH-HhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhh-cceeee
Confidence 44444444556678888887 5678888888888888888899989888654 674 998754
No 285
>PRK11469 hypothetical protein; Provisional
Probab=67.15 E-value=74 Score=26.59 Aligned_cols=52 Identities=17% Similarity=0.181 Sum_probs=31.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhHH-HHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Q 021653 54 HMPLTKAANTLTNFGGTGSLTP-LIGAFVADAYAGRFWTITIASIIYQIGMICL 106 (309)
Q Consensus 54 ~~s~~~~~~~~~~~~~~~~~~~-l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~ 106 (309)
+.+.......+........... .++..++++ +|||-.++-|.++..+|.-.+
T Consensus 130 g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~-~g~~a~~lgG~iLI~iGi~il 182 (188)
T PRK11469 130 QVNIIATALAIGCATLIMSTLGMMVGRFIGSI-IGKKAEILGGLVLIGIGVQIL 182 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 4444444445555444444333 355555665 599888888888888876544
No 286
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=62.24 E-value=1.3e+02 Score=27.84 Aligned_cols=54 Identities=15% Similarity=0.017 Sum_probs=36.6
Q ss_pred HHHHHhhhcchhhhhhhhhcccCCCChhh-hhhhhHHHHHHHHHHHHHHHHHHHH
Q 021653 142 LLAALGSGGIRPCVVAFGADQFDETDPKQ-ATKTWKYFNWYYFVMGAAILVAVTV 195 (309)
Q Consensus 142 ~l~gig~g~~~~~~~~~~ad~~~~~~~~~-~~~r~~~~~~~~~~~~iG~~l~~~~ 195 (309)
.++|+-..+..+....++-.+.|.-++++ .--.|..|+.+-.+..+|+.+-+.+
T Consensus 247 l~LG~~qslFE~smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~l 301 (354)
T PF05631_consen 247 LLLGLIQSLFEGSMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSRL 301 (354)
T ss_pred HHHHHHHHHHHHHHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 35577777788888888888777654321 1246788888777788887765433
No 287
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=59.20 E-value=34 Score=24.02 Aligned_cols=51 Identities=12% Similarity=0.393 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHHHhCcceec
Q 021653 179 NWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYRN 232 (309)
Q Consensus 179 ~~~~~~~~iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~ 232 (309)
.+++....++++++ .+.||+.++ .+..+++.++..++++++..+-.|.|.+
T Consensus 11 ~l~~~il~~~~iis-fi~Gy~~q~--~~~~~~~~~~g~~~~~lv~vP~Wp~y~r 61 (76)
T PF06645_consen 11 KLMQYILIISAIIS-FIVGYITQS--FSYTFYIYGAGVVLTLLVVVPPWPFYNR 61 (76)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHH--HHHHHHHHHHHHHHHHhheeCCcHhhcC
Confidence 34455566677666 455666554 3456666666555666555555555543
No 288
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=58.53 E-value=47 Score=21.42 Aligned_cols=30 Identities=13% Similarity=0.024 Sum_probs=19.5
Q ss_pred HHHHHHhHHHHHHHHHHhccchHHHHHHHH
Q 021653 67 FGGTGSLTPLIGAFVADAYAGRFWTITIAS 96 (309)
Q Consensus 67 ~~~~~~~~~l~~G~laD~~~GR~~~i~i~~ 96 (309)
......+.....|+..|+++|..+...+..
T Consensus 9 ~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g 38 (55)
T PF09527_consen 9 TMAAPILVGFFLGYWLDKWFGTSPWFTLIG 38 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHH
Confidence 344455566678889999889855444433
No 289
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=55.47 E-value=2.1e+02 Score=29.25 Aligned_cols=53 Identities=17% Similarity=0.229 Sum_probs=34.7
Q ss_pred HHHHHHh---ccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcc
Q 021653 78 GAFVADA---YAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGI 151 (309)
Q Consensus 78 ~G~laD~---~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~ 151 (309)
.+-++|. +-||.+-++++.+.+.++.+...+... .++.|..++.+.+++.++.
T Consensus 43 a~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~---------------------~p~lf~~~l~~~tf~~~ml 98 (704)
T TIGR01666 43 AAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFG---------------------KPWLFAVGLTVSTFGFIML 98 (704)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhc---------------------CcHHHHHHHHHHHHHHHHH
Confidence 3446654 557888888888887777766555441 4566777777777666554
No 290
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=55.35 E-value=1e+02 Score=24.91 Aligned_cols=50 Identities=24% Similarity=0.305 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHH
Q 021653 134 VAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVA 192 (309)
Q Consensus 134 ~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~ 192 (309)
...+.+..++.|+|.-++ .+.+++-.-+++ +-|++.+|-.+-.|++-+..
T Consensus 97 ~~~~~~S~~~Fg~gllGi---sYGilSaSWD~~------r~GSllG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 97 WAVLLVSLVFFGLGLLGI---SYGILSASWDPE------REGSLLGWEEFKRNWGRMWE 146 (153)
T ss_pred hHHHHHHHHHHHHHHHhh---hhhhcccccCCC------CCCCcccHHHHHHhHHHHHH
Confidence 334444444455544332 233334445555 68999999988888876643
No 291
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=52.67 E-value=2.1e+02 Score=27.17 Aligned_cols=94 Identities=11% Similarity=0.087 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHH
Q 021653 60 AANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYV 139 (309)
Q Consensus 60 ~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (309)
.|.+-.+..+...++++..|++..++ .+..-+.++.+-.+.|.+++..+. ..+.+..++
T Consensus 287 NG~VeA~~tllgA~~al~~g~v~~~w-~~~~~l~l~~~S~l~a~~L~lm~~--------------------t~~Iwv~Y~ 345 (412)
T PF01770_consen 287 NGAVEAASTLLGAIAALLAGYVKVNW-DRWGELALGVFSLLQAGLLFLMSF--------------------TGNIWVCYA 345 (412)
T ss_pred chHHHHHHHHHHHHHHHHHhHhhcch-HHHHHHHHHHHHHHHHHHHHHHHH--------------------hhHHHHHHH
Confidence 35566667777788889999997664 776655555554443333333222 127788888
Q ss_pred HHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHH
Q 021653 140 SLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (309)
Q Consensus 140 ~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 180 (309)
+-++.+.......+.+..-+|.....+ +.+..|+.
T Consensus 346 ~yIif~~~y~fliTiA~~qIA~~l~~e------~yaLVFGi 380 (412)
T PF01770_consen 346 GYIIFRSLYMFLITIASFQIAKNLSEE------RYALVFGI 380 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccc------ceeeeeee
Confidence 877776666666555555555555544 45666654
No 292
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=49.84 E-value=35 Score=33.23 Aligned_cols=252 Identities=10% Similarity=-0.021 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhHH---hcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHH
Q 021653 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTT---QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (309)
Q Consensus 23 ~~~~i~~~~~~~~~~~~~~~~~l~~yl~~---~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~ 99 (309)
.+.++++..+++..-.-.....+|..+++ ...++....-.+.+...-.=.+-+|+.--+-.+.+||||..++=. =+
T Consensus 1 n~~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~-Q~ 79 (544)
T PF13000_consen 1 NIALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPI-QY 79 (544)
T ss_pred CeeHHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhHH-HH
Q ss_pred HHHHHHHHHHhhc------------------CCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhc
Q 021653 100 QIGMICLTISAIL------------------PQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGAD 161 (309)
Q Consensus 100 ~~g~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad 161 (309)
+.|..++.++... ..+... +...+....+++-+-.+-..-++-...-.
T Consensus 80 l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~--------------~i~~Lt~~F~~L~fl~ATQDIAVDGWALT 145 (544)
T PF13000_consen 80 LSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNI--------------TIKFLTWFFFILVFLCATQDIAVDGWALT 145 (544)
T ss_pred HHHHHHHHHHhccchhhcccccchhhhcCCCCccccc--------------chhHHHHHHHHHHHHHccCCceeehhhhh
Q ss_pred ccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc------------------cccchhhhhHHHHHHHHHHHHH
Q 021653 162 QFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD------------------NIGWGWGLGIPTFAMFLSIIAF 223 (309)
Q Consensus 162 ~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~------------------~~gw~~~f~i~~~~~~~~~~~~ 223 (309)
+..++ .++-+......+.++|.+++.++.--+.+ ..+-..-||-...+..-..+.+
T Consensus 146 ~Ls~~------n~~~ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~ 219 (544)
T PF13000_consen 146 MLSPE------NVGYASTCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAF 219 (544)
T ss_pred hcChh------hcchHHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHhe
Q ss_pred HHhCcceeccCCCCChhHHHHHHHHHHHHcCCCCCCCCCcchhhhhhhhhhhhcCCcccCCcccccccccccc
Q 021653 224 LIGYPLYRNLDPAGSPFTRLLQVCVAAFRKRKLTMVTDPKLLYENEELDAAISLGGKLLHTKHMKDIYHRFNR 296 (309)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 296 (309)
.-..+......++.++.....+.-...--+.+......+++..++++....--+.-+++.-+.|- ++|+.-|
T Consensus 220 ~k~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li-~ilL~~K 291 (544)
T PF13000_consen 220 FKKEKPHSESLPKIEPINKSDGKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLI-IILLTAK 291 (544)
T ss_pred EeecccccccCccccccccccccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHH-HHHHHHH
No 293
>KOG2082 consensus K+/Cl- cotransporter KCC1 and related transporters [Inorganic ion transport and metabolism]
Probab=49.82 E-value=2.1e+02 Score=29.51 Aligned_cols=21 Identities=24% Similarity=0.482 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 021653 90 WTITIASIIYQIGMICLTISA 110 (309)
Q Consensus 90 ~~i~i~~~l~~~g~~~~~~~~ 110 (309)
|++.+|.++..+|..++.+..
T Consensus 497 wVi~IGsFlST~GAgLQsLtg 517 (1075)
T KOG2082|consen 497 WVIVIGSFLSTCGAGLQSLTG 517 (1075)
T ss_pred eeeehhHHHHHhHHHHhhhcC
Confidence 689999999999999988754
No 294
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=48.26 E-value=87 Score=23.33 Aligned_cols=26 Identities=8% Similarity=-0.156 Sum_probs=16.1
Q ss_pred HHHHHHhHHHHHHHHHHhccchHHHH
Q 021653 67 FGGTGSLTPLIGAFVADAYAGRFWTI 92 (309)
Q Consensus 67 ~~~~~~~~~l~~G~laD~~~GR~~~i 92 (309)
..++..+...+.|...|+.+|-.+..
T Consensus 51 ~~v~pil~G~~lG~WLD~~~~t~~~~ 76 (100)
T TIGR02230 51 SVAIPTLLGVAVGIWLDRHYPSPFSW 76 (100)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCcHH
Confidence 33444455566778888887865533
No 295
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=41.85 E-value=1.6e+02 Score=27.00 Aligned_cols=76 Identities=13% Similarity=0.208 Sum_probs=52.7
Q ss_pred HHHHHHHhhHHHHHHHhHHhcCCC-HHHHHHH----HHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Q 021653 33 CEKLAVVGFNTNMISYLTTQLHMP-LTKAANT----LTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLT 107 (309)
Q Consensus 33 ~~~~~~~~~~~~l~~yl~~~~~~s-~~~~~~~----~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~ 107 (309)
+..++.-++..|+..+..+++.-+ ..+.... ....+++..++..+.+++.|++ |-.....+..+..+++.+...
T Consensus 42 lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~-~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 42 LIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNY-GWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhcccc-chhhhhhHHHHHHHHHHHHHH
Confidence 455666678999999999988765 3443333 3444555556666678889996 998888888887777776665
Q ss_pred HH
Q 021653 108 IS 109 (309)
Q Consensus 108 ~~ 109 (309)
..
T Consensus 121 ~~ 122 (372)
T PF00854_consen 121 SG 122 (372)
T ss_dssp CC
T ss_pred hC
Confidence 43
No 296
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=40.36 E-value=4.3e+02 Score=27.12 Aligned_cols=53 Identities=17% Similarity=0.147 Sum_probs=35.2
Q ss_pred HHHHHH---hccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhhhcc
Q 021653 78 GAFVAD---AYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGI 151 (309)
Q Consensus 78 ~G~laD---~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~ 151 (309)
.+-++| ++-||.+-++++.+++.++.+...+... ..+.+..++.+.+++.++.
T Consensus 43 a~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~---------------------~p~~~~~~l~~~tf~~~ml 98 (701)
T TIGR01667 43 AAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFP---------------------KPWLFPFLLTLLTFGFILL 98 (701)
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhc---------------------chHHHHHHHHHHHHHHHHH
Confidence 344554 4557888999888888887776665441 4566667777776665553
No 297
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=38.92 E-value=1.2e+02 Score=24.32 Aligned_cols=39 Identities=26% Similarity=0.380 Sum_probs=25.7
Q ss_pred HHHhhccccchhhhhHHHHHHHHHHHHHHHhCcceeccC
Q 021653 196 LVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYRNLD 234 (309)
Q Consensus 196 ~~~i~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
.-+-...+||.+.++....+.+.+.++++=..|+|+.++
T Consensus 52 lm~~spy~G~~s~~~ftv~fv~m~~~llfDI~P~YrfED 90 (155)
T PF10777_consen 52 LMYYSPYFGLGSVWGFTVFFVVMAAFLLFDIKPRYRFED 90 (155)
T ss_pred HHHhcchhhhHHHHHHHHHHHHHHHHHHhhccceeeecc
Confidence 334456778777666666666666666666778887543
No 298
>COG3619 Predicted membrane protein [Function unknown]
Probab=38.88 E-value=2.6e+02 Score=24.19 Aligned_cols=24 Identities=13% Similarity=-0.168 Sum_probs=11.1
Q ss_pred HHHHHHHHHhHHHHHHHHHHhccch
Q 021653 64 LTNFGGTGSLTPLIGAFVADAYAGR 88 (309)
Q Consensus 64 ~~~~~~~~~~~~l~~G~laD~~~GR 88 (309)
.....+...++...+..+.-+. .|
T Consensus 61 ~~~pii~Fv~Gv~~~~~~~r~~-~~ 84 (226)
T COG3619 61 LLLPILAFVLGVAAAELISRRA-TR 84 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-cc
Confidence 3334444445544455555443 44
No 299
>PRK02237 hypothetical protein; Provisional
Probab=36.87 E-value=70 Score=24.15 Aligned_cols=49 Identities=18% Similarity=0.182 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Q 021653 58 TKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLT 107 (309)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~ 107 (309)
++++-+...+.+...+.+++.++..|.. -+-+-=.+|..++.+|..+..
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~-~Pd~~D~iGa~v~L~G~~iI~ 104 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGV-RPDRWDWIGAAICLVGMAVIM 104 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCc-CCChhHHHhHHHHHHhHHHhe
Confidence 4578889999999999999999999996 655666677777877776554
No 300
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=36.86 E-value=2.5e+02 Score=23.46 Aligned_cols=37 Identities=11% Similarity=-0.105 Sum_probs=17.6
Q ss_pred HHHHHHHHhHHHHHHHHHH---hccchHHHHHHHHHHHHHH
Q 021653 65 TNFGGTGSLTPLIGAFVAD---AYAGRFWTITIASIIYQIG 102 (309)
Q Consensus 65 ~~~~~~~~~~~l~~G~laD---~~~GR~~~i~i~~~l~~~g 102 (309)
....+...++..+++.+.+ +. .+++.......+..+.
T Consensus 53 ~~~i~~F~~G~~~~~~i~~~~~~~-~~~~~~~~~l~~~~~l 92 (209)
T PF06912_consen 53 LLAILSFILGAFLAGLIVRRSRRR-RRRRWYRILLLLEAIL 92 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccc-chhHHHHHHHHHHHHH
Confidence 3344455566666777732 22 3444444444444333
No 301
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=36.41 E-value=1.1e+02 Score=28.68 Aligned_cols=22 Identities=18% Similarity=0.471 Sum_probs=12.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHH
Q 021653 86 AGRFWTITIASIIYQIGMICLT 107 (309)
Q Consensus 86 ~GR~~~i~i~~~l~~~g~~~~~ 107 (309)
.|+.|++++-.....+|...+.
T Consensus 200 v~~~r~V~vNl~~~~l~l~tlv 221 (374)
T PF01528_consen 200 VGPFRAVVVNLVLSLLGLETLV 221 (374)
T ss_pred HhccHHHHHHHHHHHHHHHHHH
Confidence 5666777766655555544333
No 302
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=36.05 E-value=69 Score=24.10 Aligned_cols=50 Identities=14% Similarity=0.174 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Q 021653 58 TKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTI 108 (309)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~ 108 (309)
...+-+...+.+...+.+++.++..|+. -+-+-=.+|..++.+|..+..+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~-~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGV-RPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCc-CCChHHHHhHHHHHHhHHheEe
Confidence 5677888999999999999999999996 6666667788888887765543
No 303
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=35.57 E-value=4.3e+02 Score=25.83 Aligned_cols=76 Identities=12% Similarity=0.175 Sum_probs=53.6
Q ss_pred HHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHH-HHHHHHHHHHhhccccchhhhhHHHHHHHHHHHH
Q 021653 144 AALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAA-ILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (309)
Q Consensus 144 ~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG-~~l~~~~~~~i~~~~gw~~~f~i~~~~~~~~~~~ 222 (309)
.|++.....+.-..-+.+.+|... .+..+++-++...++- ..+....++.+....||-.+=.++-++++++.++
T Consensus 294 Y~v~inLvE~~wKs~ik~~~~~~~-----~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg~l 368 (509)
T COG3202 294 YGVSINLVEGVWKSGIKELYPTTN-----EYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITGVL 368 (509)
T ss_pred HHHHHHHHHHHHHHhHHHhcCChh-----HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 356666667777777788888875 5788888777766666 3344455777888899998777777777666555
Q ss_pred HH
Q 021653 223 FL 224 (309)
Q Consensus 223 ~~ 224 (309)
++
T Consensus 369 FF 370 (509)
T COG3202 369 FF 370 (509)
T ss_pred HH
Confidence 44
No 304
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=34.43 E-value=3.3e+02 Score=24.17 Aligned_cols=107 Identities=16% Similarity=0.140 Sum_probs=51.6
Q ss_pred HHHHHHHHHhHHHHHHHHHHhccchHHHHH----HHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHH
Q 021653 64 LTNFGGTGSLTPLIGAFVADAYAGRFWTIT----IASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYV 139 (309)
Q Consensus 64 ~~~~~~~~~~~~l~~G~laD~~~GR~~~i~----i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (309)
.-.+..+..+|+..-|...-.-.-||+-+. .+.+++++..++ ....-+ .+......+++
T Consensus 147 ~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~--~~~~g~---------------~~~~~~~~f~I 209 (267)
T PF07672_consen 147 QILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVV--VYFVGP---------------GNAAGFAFFYI 209 (267)
T ss_pred HHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHH--HHHhCc---------------chHHHHHHHHH
Confidence 334555566676777777655445665444 223333333332 111000 12224566777
Q ss_pred HHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHH
Q 021653 140 SLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILV 191 (309)
Q Consensus 140 ~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l 191 (309)
.-++.|+..=+++++.. .....++..+|+ +.|..++.......+.-.+
T Consensus 210 ~~Fl~G~f~WgiQ~ViL-~lPhEyK~~~pk---~ig~~Fg~iWGfGY~~yTi 257 (267)
T PF07672_consen 210 FGFLAGFFLWGIQGVIL-NLPHEYKGYNPK---KIGIQFGLIWGFGYIFYTI 257 (267)
T ss_pred HHHHHHHHHHhhhHHHh-cChhhhcCCCcc---eehhHHHHHHHHHHHHHHH
Confidence 66777665544554433 334444544432 5677776544433333333
No 305
>PF02659 DUF204: Domain of unknown function DUF; InterPro: IPR003810 Uncharacterised domain in proteins of unknown function.
Probab=33.90 E-value=1.5e+02 Score=19.86 Aligned_cols=42 Identities=19% Similarity=0.047 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHH-HhHHHHHHHHHHhccchHHHHHHHHHHHHH
Q 021653 59 KAANTLTNFGGTG-SLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (309)
Q Consensus 59 ~~~~~~~~~~~~~-~~~~l~~G~laD~~~GR~~~i~i~~~l~~~ 101 (309)
..+..++.+.... .++..++..+.++ ++++--.+.+.++..+
T Consensus 24 ~~~~~ig~~~~~~~~~G~~~G~~~~~~-~~~~~~~igg~iLi~i 66 (67)
T PF02659_consen 24 LIALIIGIFQFIMPLLGLLLGRRLGRF-IGSYAEWIGGIILIFI 66 (67)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 3344444443333 3444445555554 4766555555544443
No 306
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=32.70 E-value=2.3e+02 Score=22.67 Aligned_cols=44 Identities=14% Similarity=-0.098 Sum_probs=26.2
Q ss_pred cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHH
Q 021653 53 LHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI 97 (309)
Q Consensus 53 ~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~ 97 (309)
.|++..+.-.......+.-.++-+++++++|+. |+-..+.+..+
T Consensus 67 iGi~EkslL~sA~LvYi~PL~~l~v~~~La~~L-~~~e~~~~~~~ 110 (150)
T COG3086 67 LGIEEKSLLKSALLVYIFPLVGLFLGAILAQYL-FFSELIVIFGA 110 (150)
T ss_pred EccCcccHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHH
Confidence 455554433334445555566667888899985 77665554433
No 307
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=31.63 E-value=17 Score=32.73 Aligned_cols=55 Identities=9% Similarity=0.134 Sum_probs=3.7
Q ss_pred hHHHHHHHHHHHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHH
Q 021653 133 QVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAV 193 (309)
Q Consensus 133 ~~~~~~~~~~l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~ 193 (309)
+-+.+++..++.|+..|-..+....+..+..+++ +|...-....++.++|-.+|.
T Consensus 247 ~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~------e~e~aG~~~~~~L~~Gl~~Gs 301 (309)
T PF01733_consen 247 SDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPE------ERELAGSVMSFFLSFGLFIGS 301 (309)
T ss_dssp --------------------HHHH-------------------------------------
T ss_pred chHHHHHHHHHHHHccchhhhceeeeCCCcCCHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 3345566677889999999999999998887755 333333333444455554443
No 308
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=29.79 E-value=4.8e+02 Score=24.61 Aligned_cols=95 Identities=14% Similarity=0.162 Sum_probs=56.6
Q ss_pred HHHHhHHhcCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHH----HHH-HHHhhcCCCCCCC
Q 021653 45 MISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM----ICL-TISAILPQLRPPP 119 (309)
Q Consensus 45 l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~----~~~-~~~~~~~~~~~~~ 119 (309)
+..|+ +|-+..+.+.+++.+...+.+|+.+.-++.|.- -.-+.+..=.++-.+|- ++. .++. .
T Consensus 33 LatyL---lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~-~~~~Fv~vElllgligg~Sa~~ly~~FA~----~---- 100 (508)
T COG4262 33 LATYL---LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDA-ALARFVDVELLLGLIGGVSAAALYLLFAL----E---- 100 (508)
T ss_pred HHHHh---cCCceeehHHHHHHHHHHhchhhhhhccccCch-HHHHHHHHHHHHHHhccchHHHHHHHHHh----c----
Confidence 44444 566667778888888888888888877777653 22222222222222221 111 2222 0
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHhhhcchhhhhhhhhc
Q 021653 120 CEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGAD 161 (309)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~l~gig~g~~~~~~~~~~ad 161 (309)
+..+...++++-.++|.-+|.-.|....+...
T Consensus 101 ----------~~~~~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 101 ----------SAPSRLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred ----------cchHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 11156678888889999999988887776654
No 309
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=27.17 E-value=35 Score=26.53 Aligned_cols=10 Identities=20% Similarity=0.205 Sum_probs=4.0
Q ss_pred hhhhHHHHHH
Q 021653 207 WGLGIPTFAM 216 (309)
Q Consensus 207 ~~f~i~~~~~ 216 (309)
|.+++.++++
T Consensus 2 W~l~~iii~~ 11 (130)
T PF12273_consen 2 WVLFAIIIVA 11 (130)
T ss_pred eeeHHHHHHH
Confidence 4444433333
No 310
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=27.00 E-value=5.7e+02 Score=24.53 Aligned_cols=59 Identities=14% Similarity=0.015 Sum_probs=42.8
Q ss_pred HHHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccccchh
Q 021653 143 LAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGW 207 (309)
Q Consensus 143 l~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~~~~~~~iG~~l~~~~~~~i~~~~gw~~ 207 (309)
+.+.-.-.+.....++.+...|++ .-|+.++..+...|+|+..-..+..++.|..+|..
T Consensus 378 ~~~~~~ts~fv~~maf~aqisdp~------iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~~ 436 (510)
T KOG3574|consen 378 FHQVFVTSMFVSGMAFHAQISDPA------IGGTYMTLLNTLSNLGGNWPGTVALWLADGLTVKQ 436 (510)
T ss_pred HhhhHHHHHHHHHHHHHhhcCCcc------cCccHHHHHHHHHHhcCCcHHHHHHHhcccCceee
Confidence 333434444556677888888877 68888999999999998877777778777666543
No 311
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=26.53 E-value=5.5e+02 Score=24.22 Aligned_cols=90 Identities=9% Similarity=-0.003 Sum_probs=51.8
Q ss_pred HHHHHHHHHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHH
Q 021653 64 LTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLL 143 (309)
Q Consensus 64 ~~~~~~~~~~~~l~~G~laD~~~GR~~~i~i~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 143 (309)
=.+......++.+..|.+--.+ -|..-++++..-...+..+...+. +.+.+..|++-++
T Consensus 277 eAv~tlLGa~~~~~~g~l~i~w-~r~g~~ll~~~s~~~agllf~m~~--------------------t~~Iw~~Ya~yvl 335 (433)
T KOG3810|consen 277 EAVSTLLGAIAALAAGYLNINW-NRWGDLLLAVGSAVQAGLLFIMAQ--------------------TQHIWVCYAGYVL 335 (433)
T ss_pred HHHHHHHHHHHHHHHHheeecc-chhhHHHHHHHHHHhhhhhhhhhc--------------------ccceehhhhhHHH
Confidence 3445556667777888887653 565444444332222222222222 1256777777777
Q ss_pred HHHhhhcchhhhhhhhhcccCCCChhhhhhhhHHHHH
Q 021653 144 AALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (309)
Q Consensus 144 ~gig~g~~~~~~~~~~ad~~~~~~~~~~~~r~~~~~~ 180 (309)
...-.....+....-+|+....+ .-|..||.
T Consensus 336 fr~~y~l~itiA~~~iA~nL~~e------~~gLvFGi 366 (433)
T KOG3810|consen 336 FRVIYQLTITIATFQIARNLSSE------LFGLVFGI 366 (433)
T ss_pred HHhhHhhhhhHHHHHHHHhhhhh------hheeeeeh
Confidence 77667676666666677777765 45666654
No 312
>PHA02688 ORF059 IMV protein VP55; Provisional
Probab=24.17 E-value=2e+02 Score=26.10 Aligned_cols=38 Identities=29% Similarity=0.365 Sum_probs=24.4
Q ss_pred HHhHHHHHHHHHHhc--------------cchHHHHHHHHHHHHHHHHHHHH
Q 021653 71 GSLTPLIGAFVADAY--------------AGRFWTITIASIIYQIGMICLTI 108 (309)
Q Consensus 71 ~~~~~l~~G~laD~~--------------~GR~~~i~i~~~l~~~g~~~~~~ 108 (309)
..+.+.+++|++++| ||+.-+=+++.++.++-.+++.+
T Consensus 253 ~~lwsrl~~Wla~~~P~~~y~lttPLfSfFGlfDInv~gviiil~ii~l~IF 304 (323)
T PHA02688 253 NSLWSRLGTWLAKRYPGFYYFLTTPLFSFFGLFDINVIGVIIILFIIVLLIF 304 (323)
T ss_pred hhHHHHHHHHHHhhCCchheeecchHHHhhccchhHHHHHHHHHHHHHHHHh
Confidence 345678899999986 67776666666554444444443
No 313
>PF03213 Pox_P35: Poxvirus P35 protein; InterPro: IPR004900 The Poxvirus P35 protein is an immunodominant envelope protein. It binds to heparan sulphate on the cell surface to provide virion attachment to target cell [].; GO: 0019031 viral envelope
Probab=23.79 E-value=2e+02 Score=26.11 Aligned_cols=38 Identities=24% Similarity=0.311 Sum_probs=24.4
Q ss_pred HHhHHHHHHHHHHhc--------------cchHHHHHHHHHHHHHHHHHHHH
Q 021653 71 GSLTPLIGAFVADAY--------------AGRFWTITIASIIYQIGMICLTI 108 (309)
Q Consensus 71 ~~~~~l~~G~laD~~--------------~GR~~~i~i~~~l~~~g~~~~~~ 108 (309)
..+.+-++.|++++| ||+.-+-+++.++.++..+++.+
T Consensus 255 ~~~wsrl~~Wla~~~P~~~y~lttPLfSfFGlfDInv~g~~iil~ii~l~iF 306 (325)
T PF03213_consen 255 NSIWSRLGKWLAKRFPGAYYFLTTPLFSFFGLFDINVIGVIIILFIIILVIF 306 (325)
T ss_pred hhHHHHHHHHHHhhCCCchhhhhchHHHHcccchhHHHHHHHHHHHHHHHHh
Confidence 445677888888886 67776666666655544444443
No 314
>COG5547 Small integral membrane protein [Function unknown]
Probab=23.45 E-value=2.3e+02 Score=18.76 Aligned_cols=15 Identities=27% Similarity=0.264 Sum_probs=7.4
Q ss_pred HHHHHHHHHHhhhcc
Q 021653 137 LYVSLLLAALGSGGI 151 (309)
Q Consensus 137 ~~~~~~l~gig~g~~ 151 (309)
+.+-+.++|++.|.+
T Consensus 34 lviil~~lGv~iGl~ 48 (62)
T COG5547 34 LVIILILLGVYIGLY 48 (62)
T ss_pred HHHHHHHHHHHHHHH
Confidence 444445555555543
No 315
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=23.44 E-value=64 Score=28.58 Aligned_cols=54 Identities=15% Similarity=0.276 Sum_probs=33.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHh---hc--cccchhhhhHHHHHHHHHHHHHHHh
Q 021653 173 KTWKYFNWYYFVMGAAILVAVTVLVYI---QD--NIGWGWGLGIPTFAMFLSIIAFLIG 226 (309)
Q Consensus 173 ~r~~~~~~~~~~~~iG~~l~~~~~~~i---~~--~~gw~~~f~i~~~~~~~~~~~~~~~ 226 (309)
+|+.+..+-.++.++|++++....... .+ ...|+..+.+.+++.++-++++...
T Consensus 3 ~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 3 KKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred ccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456666666778889988764432211 11 2359988888877776655554443
No 316
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=22.74 E-value=3.6e+02 Score=21.49 Aligned_cols=24 Identities=21% Similarity=0.109 Sum_probs=18.3
Q ss_pred HHHHHHHHhHHHHHHHHHHhccchH
Q 021653 65 TNFGGTGSLTPLIGAFVADAYAGRF 89 (309)
Q Consensus 65 ~~~~~~~~~~~l~~G~laD~~~GR~ 89 (309)
.-+..+..+.+.+.|++.+|. .++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~-~~~ 83 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERL-KRS 83 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhc-ccc
Confidence 346777778888899999995 664
No 317
>PRK10692 hypothetical protein; Provisional
Probab=22.21 E-value=2.6e+02 Score=20.20 Aligned_cols=22 Identities=9% Similarity=0.369 Sum_probs=13.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHH
Q 021653 87 GRFWTITIASIIYQIGMICLTI 108 (309)
Q Consensus 87 GR~~~i~i~~~l~~~g~~~~~~ 108 (309)
-||.+.++|-+++.+|++.+..
T Consensus 2 KRk~a~~~GN~lMglGmv~Mv~ 23 (92)
T PRK10692 2 KRKNASLLGNVLMGLGLVVMVV 23 (92)
T ss_pred cchhhHHHhhHHHHHHHHHHHH
Confidence 3666666666666666655543
No 318
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=21.71 E-value=4.8e+02 Score=21.77 Aligned_cols=21 Identities=5% Similarity=-0.002 Sum_probs=17.4
Q ss_pred HHHHHHHHhHHHHHHHHHHhc
Q 021653 65 TNFGGTGSLTPLIGAFVADAY 85 (309)
Q Consensus 65 ~~~~~~~~~~~l~~G~laD~~ 85 (309)
.-|..+..+++.+.|+++||.
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~ 109 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKI 109 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhh
Confidence 346777788889999999996
No 319
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=21.33 E-value=3e+02 Score=19.24 Aligned_cols=26 Identities=8% Similarity=0.233 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhc
Q 021653 60 AANTLTNFGGTGSLTPLIGAFVADAY 85 (309)
Q Consensus 60 ~~~~~~~~~~~~~~~~l~~G~laD~~ 85 (309)
+..+.........+.+++.|++.+.+
T Consensus 9 ae~l~~~il~~~~iisfi~Gy~~q~~ 34 (76)
T PF06645_consen 9 AEKLMQYILIISAIISFIVGYITQSF 34 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455556666677778889999887
No 320
>PF04479 RTA1: RTA1 like protein; InterPro: IPR007568 This family is comprised of fungal proteins with multiple transmembrane regions. RTA1 (P53047 from SWISSPROT) is involved in resistance to 7-aminocholesterol [], while RTM1 (P40113 from SWISSPROT) confers resistance to an unknown toxic chemical in molasses []. These proteins may bind to the toxic substance, and thus prevent toxicity. They are not thought to be involved in the efflux of xenobiotics [].; GO: 0006950 response to stress, 0016021 integral to membrane
Probab=20.58 E-value=4.4e+02 Score=22.54 Aligned_cols=19 Identities=21% Similarity=0.384 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 021653 92 ITIASIIYQIGMICLTISA 110 (309)
Q Consensus 92 i~i~~~l~~~g~~~~~~~~ 110 (309)
+++|++..++|.+.-..+.
T Consensus 3 ~~~g~~~E~iGy~~R~~s~ 21 (226)
T PF04479_consen 3 FVLGGLLEVIGYIGRILSS 21 (226)
T ss_pred eeHHHHHHHHHHHHHHHHh
Confidence 4677888888888888766
No 321
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=20.54 E-value=3.7e+02 Score=20.02 Aligned_cols=24 Identities=13% Similarity=0.211 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHHhhccccc
Q 021653 182 YFVMGAAILVAVTVLVYIQDNIGW 205 (309)
Q Consensus 182 ~~~~~iG~~l~~~~~~~i~~~~gw 205 (309)
.+.+.+..+++..++-|+...++-
T Consensus 49 G~~~v~pil~G~~lG~WLD~~~~t 72 (100)
T TIGR02230 49 GWSVAIPTLLGVAVGIWLDRHYPS 72 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCC
Confidence 333444455555556677766653
No 322
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=20.25 E-value=2.4e+02 Score=17.73 Aligned_cols=30 Identities=20% Similarity=0.123 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHhhccccchhhhhHHHHHH
Q 021653 187 AAILVAVTVLVYIQDNIGWGWGLGIPTFAM 216 (309)
Q Consensus 187 iG~~l~~~~~~~i~~~~gw~~~f~i~~~~~ 216 (309)
+|++++.++.+.+....++.+.-++.+++.
T Consensus 6 iGa~vGg~l~~~lg~~~~~~~~~~i~aviG 35 (48)
T PF04226_consen 6 IGAFVGGWLFGLLGINGGGSWGSFIVAVIG 35 (48)
T ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHH
Confidence 455555555444433333344334444433
No 323
>PF06796 NapE: Periplasmic nitrate reductase protein NapE; InterPro: IPR010649 This family consists of several bacterial periplasmic nitrate reductase NapE proteins. Seven genes, napKEFDABC, encoding the periplasmic nitrate reductase system were cloned from the denitrifying phototrophic bacterium Rhodobacter sphaeroides. NapE is thought to be a transmembrane protein [].
Probab=20.01 E-value=1.5e+02 Score=19.59 Aligned_cols=29 Identities=14% Similarity=0.141 Sum_probs=14.2
Q ss_pred cCCCccHHHHHHHHH----HHHHHHHHhhHHHH
Q 021653 17 QKGGMITMPFIFSNE----VCEKLAVVGFNTNM 45 (309)
Q Consensus 17 ~~~~~~~~~~i~~~~----~~~~~~~~~~~~~l 45 (309)
++.-|+++.++.+.. .....+.||+..|+
T Consensus 14 k~~E~~~flfl~~~l~PiL~v~~Vg~YGF~VWm 46 (56)
T PF06796_consen 14 KRSELKAFLFLAVVLFPILAVAFVGGYGFIVWM 46 (56)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344467666555432 22334445555554
Done!