Query 021654
Match_columns 309
No_of_seqs 418 out of 2342
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 07:19:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021654.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021654hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3he8_A Ribose-5-phosphate isom 100.0 1.6E-58 5.5E-63 391.2 14.4 141 13-161 1-146 (149)
2 3ph3_A Ribose-5-phosphate isom 100.0 3.2E-58 1.1E-62 395.3 14.6 147 7-161 15-166 (169)
3 3s5p_A Ribose 5-phosphate isom 100.0 1.6E-58 5.6E-63 395.6 12.5 143 7-157 16-163 (166)
4 3sgw_A Ribose 5-phosphate isom 100.0 4.5E-58 1.5E-62 398.3 13.8 150 6-162 22-180 (184)
5 2vvr_A Ribose-5-phosphate isom 100.0 6.1E-58 2.1E-62 387.9 14.0 140 13-160 2-146 (149)
6 3k7p_A Ribose 5-phosphate isom 100.0 2.2E-57 7.5E-62 392.5 12.5 145 10-161 20-171 (179)
7 2vvp_A Ribose-5-phosphate isom 100.0 3.4E-57 1.2E-61 387.9 12.6 143 12-161 3-151 (162)
8 1o1x_A Ribose-5-phosphate isom 100.0 1.3E-56 4.3E-61 380.8 14.9 137 11-155 11-152 (155)
9 4em8_A Ribose 5-phosphate isom 100.0 1.8E-56 6.3E-61 377.5 13.0 133 12-154 7-145 (148)
10 2ppw_A Conserved domain protei 100.0 1E-54 3.5E-59 387.0 10.9 150 12-171 3-169 (216)
11 3ono_A Ribose/galactose isomer 100.0 2.8E-54 9.7E-59 383.7 11.4 152 11-172 2-169 (214)
12 3c5y_A Ribose/galactose isomer 100.0 2.7E-51 9.2E-56 366.7 10.5 152 11-171 20-185 (231)
13 2fqp_A Hypothetical protein BP 99.5 3.1E-13 1.1E-17 105.1 10.8 83 201-285 4-91 (97)
14 2pfw_A Cupin 2, conserved barr 99.5 1E-12 3.5E-17 104.4 13.7 102 190-293 9-112 (116)
15 4e2g_A Cupin 2 conserved barre 99.4 1E-12 3.4E-17 106.1 12.2 96 189-286 16-113 (126)
16 3fjs_A Uncharacterized protein 99.4 1.5E-12 5.2E-17 104.6 12.1 67 216-284 39-105 (114)
17 2b8m_A Hypothetical protein MJ 99.3 1.9E-11 6.4E-16 97.6 13.2 67 216-284 30-97 (117)
18 3ht1_A REMF protein; cupin fol 99.3 3.4E-12 1.2E-16 105.0 9.0 70 216-285 42-111 (145)
19 1yhf_A Hypothetical protein SP 99.3 1.5E-11 5.2E-16 97.4 12.3 78 203-282 28-107 (115)
20 3h8u_A Uncharacterized conserv 99.3 1.3E-11 4.3E-16 99.6 11.2 68 216-284 42-110 (125)
21 1v70_A Probable antibiotics sy 99.3 2.4E-11 8.2E-16 93.4 11.4 68 216-285 31-99 (105)
22 3ibm_A Cupin 2, conserved barr 99.3 3.3E-11 1.1E-15 103.4 13.3 69 216-286 59-128 (167)
23 3kgz_A Cupin 2 conserved barre 99.3 1.2E-11 4.2E-16 105.2 10.0 69 216-286 47-115 (156)
24 4i4a_A Similar to unknown prot 99.3 5.1E-11 1.7E-15 96.2 13.1 75 216-297 37-111 (128)
25 2o1q_A Putative acetyl/propion 99.3 9.8E-12 3.4E-16 104.4 8.9 93 201-296 28-127 (145)
26 3jzv_A Uncharacterized protein 99.3 1.5E-11 5E-16 105.8 9.7 69 216-286 56-124 (166)
27 2bnm_A Epoxidase; oxidoreducta 99.3 4.6E-11 1.6E-15 103.8 12.8 141 130-286 39-196 (198)
28 2gu9_A Tetracenomycin polyketi 99.3 2.3E-11 7.8E-16 95.3 9.5 69 216-286 24-95 (113)
29 1lr5_A Auxin binding protein 1 99.3 4.6E-11 1.6E-15 101.2 11.9 67 216-284 44-120 (163)
30 1o4t_A Putative oxalate decarb 99.2 5.2E-11 1.8E-15 97.8 11.5 97 188-286 19-129 (133)
31 3h7j_A Bacilysin biosynthesis 99.2 3E-11 1E-15 109.3 10.8 85 201-287 21-107 (243)
32 2q30_A Uncharacterized protein 99.2 1.3E-10 4.4E-15 90.8 12.8 67 216-284 36-105 (110)
33 2ozj_A Cupin 2, conserved barr 99.2 5.3E-11 1.8E-15 94.5 10.0 65 216-282 41-105 (114)
34 3l2h_A Putative sugar phosphat 99.2 5E-11 1.7E-15 100.8 10.2 70 216-287 49-121 (162)
35 3bal_A Acetylacetone-cleaving 99.2 6.8E-11 2.3E-15 100.5 10.2 106 188-296 12-129 (153)
36 1vj2_A Novel manganese-contain 99.2 5.5E-11 1.9E-15 96.6 8.8 67 216-284 51-117 (126)
37 4h7l_A Uncharacterized protein 99.2 1.9E-10 6.5E-15 98.1 11.9 108 185-296 15-130 (157)
38 2oa2_A BH2720 protein; 1017534 99.2 1.2E-10 4E-15 97.4 10.4 68 216-285 46-120 (148)
39 3es1_A Cupin 2, conserved barr 99.2 5.1E-11 1.8E-15 103.2 8.4 69 216-286 82-150 (172)
40 3i7d_A Sugar phosphate isomera 99.2 1.5E-10 5E-15 98.8 10.3 70 216-287 46-119 (163)
41 3ebr_A Uncharacterized RMLC-li 99.2 1.1E-10 3.8E-15 99.7 9.4 102 190-296 12-124 (159)
42 3cew_A Uncharacterized cupin p 99.1 2.3E-10 7.8E-15 92.4 10.3 65 216-282 29-95 (125)
43 3h7j_A Bacilysin biosynthesis 99.1 8.5E-11 2.9E-15 106.3 8.5 67 216-284 148-215 (243)
44 3rns_A Cupin 2 conserved barre 99.1 3.4E-10 1.2E-14 101.4 12.4 73 216-290 40-112 (227)
45 3lag_A Uncharacterized protein 99.1 4.9E-11 1.7E-15 93.7 5.9 79 206-284 8-90 (98)
46 2vpv_A Protein MIF2, MIF2P; nu 99.1 2.2E-10 7.5E-15 98.7 10.2 69 216-286 91-161 (166)
47 2f4p_A Hypothetical protein TM 99.1 2.2E-10 7.4E-15 96.0 10.0 67 216-284 51-118 (147)
48 2o8q_A Hypothetical protein; c 99.1 1.9E-10 6.4E-15 93.8 9.1 58 221-280 51-110 (134)
49 1y9q_A Transcriptional regulat 99.1 2.4E-10 8.1E-15 99.1 9.6 67 216-285 107-175 (192)
50 3rns_A Cupin 2 conserved barre 99.1 4.7E-10 1.6E-14 100.5 11.4 67 216-284 156-223 (227)
51 1sfn_A Conserved hypothetical 99.1 4.8E-10 1.6E-14 101.7 11.1 68 216-285 168-236 (246)
52 1sef_A Conserved hypothetical 99.1 1.3E-09 4.3E-14 100.3 13.6 93 188-282 150-251 (274)
53 1dgw_A Canavalin; duplicated s 99.1 5E-10 1.7E-14 97.0 10.2 71 216-286 44-117 (178)
54 1fi2_A Oxalate oxidase, germin 99.1 5.7E-10 1.9E-14 98.2 10.5 69 216-284 75-150 (201)
55 2ozi_A Hypothetical protein RP 99.1 2.2E-10 7.6E-15 90.1 6.4 68 216-284 20-90 (98)
56 3cjx_A Protein of unknown func 99.0 7E-10 2.4E-14 95.4 10.0 104 189-296 12-126 (165)
57 3lwc_A Uncharacterized protein 99.0 6.3E-10 2.1E-14 90.4 9.1 59 216-277 43-101 (119)
58 2i45_A Hypothetical protein; n 99.0 2.9E-10 9.8E-15 89.3 6.8 59 217-278 32-92 (107)
59 4b29_A Dimethylsulfoniopropion 99.0 6.5E-10 2.2E-14 99.2 8.9 72 216-289 135-208 (217)
60 4e2q_A Ureidoglycine aminohydr 99.0 1.7E-09 5.8E-14 99.6 11.1 66 216-283 189-255 (266)
61 2xlg_A SLL1785 protein, CUCA; 99.0 4.9E-10 1.7E-14 101.8 7.1 68 216-283 46-132 (239)
62 1y3t_A Hypothetical protein YX 99.0 1.7E-09 5.7E-14 101.0 10.5 89 188-279 16-111 (337)
63 1x82_A Glucose-6-phosphate iso 99.0 1.6E-09 5.3E-14 94.8 9.6 69 216-286 70-152 (190)
64 3d82_A Cupin 2, conserved barr 99.0 1.8E-09 6.1E-14 83.1 8.8 56 224-281 40-96 (102)
65 1sq4_A GLXB, glyoxylate-induce 99.0 8.5E-10 2.9E-14 102.0 8.0 70 216-287 71-142 (278)
66 2opk_A Hypothetical protein; p 99.0 5.9E-09 2E-13 83.3 11.5 57 221-279 38-99 (112)
67 1rc6_A Hypothetical protein YL 99.0 2E-09 6.7E-14 98.2 9.4 68 216-285 182-251 (261)
68 1o5u_A Novel thermotoga mariti 99.0 1.9E-09 6.5E-14 85.2 8.1 64 216-283 34-98 (101)
69 1rc6_A Hypothetical protein YL 98.9 1.6E-09 5.5E-14 98.8 8.5 70 216-287 62-133 (261)
70 1j58_A YVRK protein; cupin, de 98.9 4.8E-09 1.6E-13 100.4 11.9 99 189-288 227-336 (385)
71 4axo_A EUTQ, ethanolamine util 98.9 5.8E-09 2E-13 88.4 10.7 98 185-288 25-135 (151)
72 4e2q_A Ureidoglycine aminohydr 98.9 2.4E-09 8.2E-14 98.6 8.1 69 216-288 73-142 (266)
73 2vqa_A SLL1358 protein, MNCA; 98.9 9E-09 3.1E-13 97.5 12.3 71 216-286 237-311 (361)
74 2cav_A Protein (canavalin); vi 98.9 6.2E-09 2.1E-13 102.4 11.4 97 189-285 50-161 (445)
75 1sq4_A GLXB, glyoxylate-induce 98.9 3.8E-09 1.3E-13 97.7 9.1 66 216-283 194-260 (278)
76 1y3t_A Hypothetical protein YX 98.9 1.1E-08 3.6E-13 95.5 12.3 98 188-289 188-292 (337)
77 2vqa_A SLL1358 protein, MNCA; 98.9 5.3E-09 1.8E-13 99.1 9.7 86 201-286 33-129 (361)
78 1sef_A Conserved hypothetical 98.9 3.5E-09 1.2E-13 97.3 7.9 70 216-287 65-136 (274)
79 1juh_A Quercetin 2,3-dioxygena 98.8 1.9E-08 6.5E-13 95.8 11.6 91 188-280 17-121 (350)
80 2pyt_A Ethanolamine utilizatio 98.8 1.3E-08 4.3E-13 84.3 8.7 95 185-286 20-124 (133)
81 2d40_A Z3393, putative gentisa 98.8 6E-09 2E-13 99.6 7.5 68 216-284 103-170 (354)
82 2q1z_B Anti-sigma factor CHRR, 98.8 2.1E-08 7.2E-13 88.1 10.1 84 195-284 105-192 (195)
83 2ea7_A 7S globulin-1; beta bar 98.7 4.4E-08 1.5E-12 96.1 11.2 95 189-283 24-134 (434)
84 3bcw_A Uncharacterized protein 98.7 4.4E-08 1.5E-12 80.0 9.3 64 216-281 52-115 (123)
85 1uij_A Beta subunit of beta co 98.7 4.2E-08 1.4E-12 95.7 10.8 91 192-282 16-121 (416)
86 3bu7_A Gentisate 1,2-dioxygena 98.7 4.8E-08 1.6E-12 94.7 10.9 65 216-282 297-362 (394)
87 1sfn_A Conserved hypothetical 98.7 7.5E-08 2.6E-12 87.2 11.6 65 216-286 53-117 (246)
88 1fxz_A Glycinin G1; proglycini 98.7 8.1E-08 2.8E-12 95.2 12.4 84 197-281 313-410 (476)
89 1j58_A YVRK protein; cupin, de 98.7 3.7E-08 1.3E-12 94.2 9.5 79 200-278 59-147 (385)
90 3c3v_A Arachin ARAH3 isoform; 98.7 1E-07 3.5E-12 95.0 12.7 84 197-281 347-444 (510)
91 3nw4_A Gentisate 1,2-dioxygena 98.7 3.5E-08 1.2E-12 94.7 8.2 66 216-283 106-172 (368)
92 3o14_A Anti-ecfsigma factor, C 98.7 1.2E-07 4.2E-12 85.1 11.2 91 189-285 13-109 (223)
93 3bu7_A Gentisate 1,2-dioxygena 98.6 8.9E-08 3E-12 92.8 10.4 68 216-284 126-194 (394)
94 2e9q_A 11S globulin subunit be 98.6 7.2E-08 2.5E-12 95.1 9.2 69 216-284 66-158 (459)
95 1fxz_A Glycinin G1; proglycini 98.6 1.1E-07 3.7E-12 94.3 9.8 69 216-284 51-144 (476)
96 1yfu_A 3-hydroxyanthranilate-3 98.6 2.2E-07 7.5E-12 80.0 10.3 63 220-282 42-107 (174)
97 2d40_A Z3393, putative gentisa 98.6 1.7E-07 5.8E-12 89.5 10.4 61 216-278 271-331 (354)
98 2d5f_A Glycinin A3B4 subunit; 98.6 2.5E-07 8.5E-12 92.0 11.5 81 197-277 342-436 (493)
99 2d5f_A Glycinin A3B4 subunit; 98.6 1.6E-07 5.5E-12 93.4 9.9 69 216-284 48-144 (493)
100 3qac_A 11S globulin SEED stora 98.5 2.1E-07 7.2E-12 91.8 9.0 84 201-284 30-161 (465)
101 1vr3_A Acireductone dioxygenas 98.5 6.2E-07 2.1E-11 78.7 10.7 66 216-281 77-155 (191)
102 1juh_A Quercetin 2,3-dioxygena 98.5 4.1E-07 1.4E-11 86.5 10.0 68 217-286 253-324 (350)
103 2phl_A Phaseolin; plant SEED s 98.5 3.1E-07 1E-11 89.1 8.9 96 189-284 15-132 (397)
104 3c3v_A Arachin ARAH3 isoform; 98.5 3.5E-07 1.2E-11 91.2 9.3 69 216-284 51-157 (510)
105 2e9q_A 11S globulin subunit be 98.5 8E-07 2.7E-11 87.7 11.7 85 196-281 296-394 (459)
106 3fz3_A Prunin; TREE NUT allerg 98.5 1.1E-06 3.6E-11 87.7 12.4 89 197-285 369-471 (531)
107 1zvf_A 3-hydroxyanthranilate 3 98.5 7.7E-07 2.6E-11 76.5 9.7 63 221-283 42-110 (176)
108 2y0o_A Probable D-lyxose ketol 98.4 1.9E-06 6.4E-11 74.6 11.4 60 216-277 56-143 (175)
109 2phl_A Phaseolin; plant SEED s 98.4 2.2E-06 7.4E-11 83.1 12.4 86 197-282 220-319 (397)
110 2arc_A ARAC, arabinose operon 98.4 1.7E-06 5.9E-11 71.4 10.2 49 227-277 32-80 (164)
111 1uij_A Beta subunit of beta co 98.4 2.6E-06 8.8E-11 83.1 12.2 89 194-282 221-336 (416)
112 1zrr_A E-2/E-2' protein; nicke 98.3 2.2E-07 7.4E-12 80.8 3.6 53 226-278 93-147 (179)
113 3ksc_A LEGA class, prolegumin; 98.3 4.9E-06 1.7E-10 82.6 13.7 82 196-277 332-427 (496)
114 2ea7_A 7S globulin-1; beta bar 98.3 2.6E-06 9.1E-11 83.4 11.5 88 194-281 238-351 (434)
115 3ksc_A LEGA class, prolegumin; 98.3 1.3E-06 4.5E-11 86.7 9.1 70 216-285 49-142 (496)
116 3kgl_A Cruciferin; 11S SEED gl 98.3 2.8E-06 9.4E-11 83.9 11.2 83 198-281 299-395 (466)
117 3nw4_A Gentisate 1,2-dioxygena 98.2 5.7E-06 2E-10 79.4 11.4 65 216-282 282-346 (368)
118 3kgl_A Cruciferin; 11S SEED gl 98.2 3.9E-06 1.3E-10 82.8 9.0 70 216-285 46-177 (466)
119 3qac_A 11S globulin SEED stora 98.2 9.2E-06 3.1E-10 80.1 11.3 85 196-281 297-395 (465)
120 2cav_A Protein (canavalin); vi 98.1 1.5E-05 5.1E-10 78.3 12.1 85 194-278 253-361 (445)
121 3eqe_A Putative cystein deoxyg 98.1 3.9E-05 1.3E-09 66.0 13.2 78 205-282 59-146 (171)
122 3s7i_A Allergen ARA H 1, clone 98.1 1E-05 3.6E-10 78.8 10.5 95 189-283 8-117 (418)
123 3fz3_A Prunin; TREE NUT allerg 98.0 1.2E-05 4.1E-10 80.2 8.8 72 216-287 51-206 (531)
124 2gm6_A Cysteine dioxygenase ty 98.0 6.3E-05 2.2E-09 66.6 12.3 66 216-281 82-159 (208)
125 3s7i_A Allergen ARA H 1, clone 98.0 3.9E-05 1.3E-09 74.8 11.6 86 193-278 233-357 (418)
126 3d0j_A Uncharacterized protein 97.9 3.3E-05 1.1E-09 64.2 7.8 62 224-285 40-108 (140)
127 3st7_A Capsular polysaccharide 97.7 8.1E-05 2.8E-09 69.7 9.0 72 216-287 275-354 (369)
128 2qnk_A 3-hydroxyanthranilate 3 97.7 0.00025 8.5E-09 65.3 11.8 61 222-283 40-103 (286)
129 3es4_A Uncharacterized protein 97.6 0.00081 2.8E-08 54.2 11.6 63 216-280 45-107 (116)
130 3gbg_A TCP pilus virulence reg 97.6 0.0001 3.4E-09 66.5 6.9 48 226-276 22-72 (276)
131 3eln_A Cysteine dioxygenase ty 97.5 0.00032 1.1E-08 61.7 8.9 66 216-281 73-151 (200)
132 3o14_A Anti-ecfsigma factor, C 97.5 0.00036 1.2E-08 62.3 9.3 82 202-291 133-217 (223)
133 3myx_A Uncharacterized protein 97.5 0.0004 1.4E-08 62.7 9.0 67 216-286 50-117 (238)
134 3uss_A Putative uncharacterize 97.4 0.0016 5.6E-08 57.7 12.2 76 206-281 62-153 (211)
135 2pa7_A DTDP-6-deoxy-3,4-keto-h 97.4 0.0013 4.5E-08 54.7 10.8 72 218-289 40-116 (141)
136 3myx_A Uncharacterized protein 97.2 0.0036 1.2E-07 56.5 12.7 63 216-280 170-232 (238)
137 3kmh_A D-lyxose isomerase; cup 96.9 0.0033 1.1E-07 56.4 9.0 63 216-278 109-197 (246)
138 2vec_A YHAK, pirin-like protei 96.9 0.0041 1.4E-07 56.7 9.5 60 218-278 69-131 (256)
139 3ejk_A DTDP sugar isomerase; Y 96.8 0.0087 3E-07 51.4 10.3 64 219-282 59-136 (174)
140 4gjz_A Lysine-specific demethy 96.7 0.0053 1.8E-07 53.4 8.6 61 221-281 132-229 (235)
141 2qdr_A Uncharacterized protein 96.6 0.0096 3.3E-07 54.1 9.7 77 204-286 79-159 (303)
142 1tq5_A Protein YHHW; bicupin, 96.5 0.009 3.1E-07 53.9 9.1 59 218-277 46-107 (242)
143 2qnk_A 3-hydroxyanthranilate 3 96.5 0.0074 2.5E-07 55.5 8.2 47 234-282 227-273 (286)
144 1vrb_A Putative asparaginyl hy 96.4 0.021 7.1E-07 53.9 11.2 65 222-286 150-252 (342)
145 3bb6_A Uncharacterized protein 96.4 0.0063 2.2E-07 49.7 6.5 71 222-298 23-105 (127)
146 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 96.1 0.015 5.1E-07 51.0 7.8 62 221-282 68-138 (197)
147 3ryk_A DTDP-4-dehydrorhamnose 96.1 0.021 7.3E-07 50.3 8.7 65 221-285 78-157 (205)
148 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 95.9 0.038 1.3E-06 47.9 9.2 65 221-285 56-134 (185)
149 1dgw_X Canavalin; duplicated s 95.8 0.0094 3.2E-07 44.6 4.4 34 216-249 39-73 (79)
150 2ixk_A DTDP-4-dehydrorhamnose 95.7 0.046 1.6E-06 47.3 9.2 65 221-285 57-135 (184)
151 3al5_A HTYW5, JMJC domain-cont 95.7 0.048 1.6E-06 51.2 10.0 82 221-302 175-297 (338)
152 1wlt_A 176AA long hypothetical 95.6 0.06 2E-06 47.1 9.5 66 221-286 73-153 (196)
153 2p17_A Pirin-like protein; GK1 95.6 0.048 1.6E-06 50.0 9.3 61 219-280 45-108 (277)
154 1dzr_A DTDP-4-dehydrorhamnose 95.4 0.075 2.6E-06 45.9 9.4 64 222-285 56-134 (183)
155 2c0z_A NOVW; isomerase, epimer 95.1 0.065 2.2E-06 47.5 8.2 65 221-285 63-142 (216)
156 2xdv_A MYC-induced nuclear ant 95.0 0.13 4.6E-06 50.1 10.8 56 222-277 148-223 (442)
157 2qdr_A Uncharacterized protein 94.9 0.12 4E-06 47.1 9.2 73 205-290 206-290 (303)
158 1oi6_A PCZA361.16; epimerase, 94.9 0.13 4.5E-06 45.2 9.5 64 221-284 55-133 (205)
159 1upi_A DTDP-4-dehydrorhamnose 94.9 0.15 5E-06 45.5 9.8 65 221-285 74-153 (225)
160 3dl3_A Tellurite resistance pr 94.8 0.1 3.5E-06 42.0 7.8 57 229-285 32-96 (119)
161 3d8c_A Hypoxia-inducible facto 94.3 0.12 4.1E-06 48.7 8.2 58 220-277 190-285 (349)
162 3iwt_A 178AA long hypothetical 93.8 0.11 3.7E-06 44.0 6.3 50 28-81 43-94 (178)
163 4diq_A Lysine-specific demethy 93.6 0.17 5.9E-06 50.0 8.0 53 226-278 178-253 (489)
164 4hn1_A Putative 3-epimerase in 93.4 0.42 1.4E-05 41.8 9.5 61 221-282 52-128 (201)
165 1j1l_A Pirin; beta sandwich, c 93.3 0.19 6.6E-06 46.3 7.6 62 218-280 45-110 (290)
166 1yud_A Hypothetical protein SO 93.2 0.7 2.4E-05 39.3 10.3 74 215-288 51-135 (170)
167 3rcq_A Aspartyl/asparaginyl be 92.5 0.38 1.3E-05 42.0 7.8 79 216-300 105-189 (197)
168 2qjv_A Uncharacterized IOLB-li 92.0 0.79 2.7E-05 41.8 9.7 69 216-286 32-110 (270)
169 3kv4_A PHD finger protein 8; e 92.0 0.49 1.7E-05 46.3 8.8 64 218-281 236-329 (447)
170 3kv5_D JMJC domain-containing 92.0 0.41 1.4E-05 47.3 8.3 65 217-281 270-364 (488)
171 3k3o_A PHF8, PHD finger protei 91.7 0.45 1.5E-05 45.4 8.0 29 253-281 217-245 (371)
172 3k2o_A Bifunctional arginine d 91.6 0.78 2.7E-05 43.0 9.5 28 254-281 257-284 (336)
173 2yu1_A JMJC domain-containing 90.9 0.84 2.9E-05 44.6 9.1 64 218-281 201-294 (451)
174 2oyz_A UPF0345 protein VPA0057 90.6 0.99 3.4E-05 34.7 7.4 50 233-282 41-90 (94)
175 3kv9_A JMJC domain-containing 90.2 0.73 2.5E-05 44.3 7.9 61 221-281 183-273 (397)
176 3pua_A GRC5, PHD finger protei 90.1 0.76 2.6E-05 44.1 7.9 61 221-281 182-272 (392)
177 3hqx_A UPF0345 protein aciad03 89.4 1.7 5.7E-05 34.4 8.0 64 218-282 42-106 (111)
178 1uuy_A CNX1, molybdopterin bio 88.7 0.56 1.9E-05 39.3 5.3 65 11-81 4-84 (167)
179 1ywk_A 4-deoxy-L-threo-5-hexos 88.6 1.2 4.2E-05 40.9 7.8 71 213-285 57-133 (289)
180 1mkz_A Molybdenum cofactor bio 88.6 0.99 3.4E-05 38.0 6.7 125 10-138 8-158 (172)
181 2ypd_A Probable JMJC domain-co 87.4 0.9 3.1E-05 43.5 6.2 30 252-281 292-321 (392)
182 1eyb_A Homogentisate 1,2-dioxy 87.2 1.5 5.1E-05 42.9 7.8 52 231-284 176-227 (471)
183 2qjv_A Uncharacterized IOLB-li 86.9 2.1 7.1E-05 39.0 8.2 77 219-296 158-259 (270)
184 1y5e_A Molybdenum cofactor bio 86.7 0.97 3.3E-05 37.9 5.5 69 9-81 10-85 (169)
185 1qwr_A Mannose-6-phosphate iso 86.4 2.7 9.3E-05 38.9 9.0 36 232-269 268-303 (319)
186 1ccw_A Protein (glutamate muta 86.0 3.4 0.00012 33.2 8.3 110 13-145 4-119 (137)
187 2pbq_A Molybdenum cofactor bio 85.6 1.2 4E-05 37.8 5.5 48 29-81 29-81 (178)
188 3pur_A Lysine-specific demethy 84.8 2.4 8.3E-05 42.1 8.0 28 254-281 367-394 (528)
189 2vec_A YHAK, pirin-like protei 84.3 4.6 0.00016 36.3 9.1 65 216-282 185-250 (256)
190 2l2q_A PTS system, cellobiose- 84.1 0.23 7.8E-06 38.8 0.3 48 71-123 6-63 (109)
191 2is8_A Molybdopterin biosynthe 83.8 1.5 5.1E-05 36.5 5.3 50 28-81 24-75 (164)
192 4fyk_A Deoxyribonucleoside 5'- 83.7 3.4 0.00012 34.4 7.4 119 11-139 1-144 (152)
193 1zx5_A Mannosephosphate isomer 83.2 0.73 2.5E-05 42.5 3.4 22 253-274 158-179 (300)
194 1e5r_A Proline oxidase; oxidor 83.0 0.71 2.4E-05 42.6 3.2 69 218-287 96-175 (290)
195 1tq5_A Protein YHHW; bicupin, 82.5 6.2 0.00021 35.1 9.2 63 216-284 163-226 (242)
196 2p17_A Pirin-like protein; GK1 82.4 3.7 0.00013 37.3 7.8 63 216-282 170-238 (277)
197 3eo6_A Protein of unknown func 82.3 3.3 0.00011 32.5 6.3 47 233-279 54-100 (106)
198 1qwr_A Mannose-6-phosphate iso 82.0 0.87 3E-05 42.3 3.4 21 253-273 158-178 (319)
199 1e2b_A Enzyme IIB-cellobiose; 81.6 0.43 1.5E-05 37.2 1.0 20 71-90 5-24 (106)
200 1pmi_A PMI, phosphomannose iso 80.1 6.4 0.00022 38.2 9.0 45 230-276 376-423 (440)
201 2wfp_A Mannose-6-phosphate iso 80.0 3 0.0001 39.9 6.5 38 230-269 339-376 (394)
202 1xru_A 4-deoxy-L-threo-5-hexos 79.6 4.2 0.00014 37.2 7.0 52 232-285 77-133 (282)
203 1tvm_A PTS system, galactitol- 79.1 0.53 1.8E-05 37.0 0.8 23 68-90 20-43 (113)
204 2wfp_A Mannose-6-phosphate iso 78.2 1.5 5E-05 42.1 3.7 22 253-274 240-261 (394)
205 3g7d_A PHPD; non heme Fe(II) d 77.7 18 0.00062 34.0 10.7 73 216-290 337-412 (443)
206 2pjk_A 178AA long hypothetical 77.1 2.7 9.2E-05 35.6 4.7 51 28-82 43-95 (178)
207 2g2c_A Putative molybdenum cof 76.4 1.2 4.2E-05 37.1 2.4 57 20-81 24-82 (167)
208 1di6_A MOGA, molybdenum cofact 76.1 4 0.00014 35.1 5.6 49 29-81 27-79 (195)
209 1zx5_A Mannosephosphate isomer 75.7 3.2 0.00011 38.1 5.2 36 232-270 246-282 (300)
210 3i3w_A Phosphoglucosamine muta 73.2 5.2 0.00018 38.6 6.2 43 14-56 43-87 (443)
211 1ft9_A Carbon monoxide oxidati 72.9 22 0.00074 29.6 9.5 64 218-283 26-92 (222)
212 3pdk_A Phosphoglucosamine muta 72.8 6.4 0.00022 38.3 6.8 46 12-57 61-108 (469)
213 1pmi_A PMI, phosphomannose iso 72.7 2.9 9.8E-05 40.7 4.2 22 254-275 267-288 (440)
214 3lkv_A Uncharacterized conserv 72.5 23 0.00078 31.5 10.1 119 10-135 6-137 (302)
215 3hdv_A Response regulator; PSI 72.0 28 0.00097 25.9 10.5 35 8-44 3-37 (136)
216 1vkr_A Mannitol-specific PTS s 71.8 0.76 2.6E-05 36.9 -0.1 20 70-89 14-34 (125)
217 3czc_A RMPB; alpha/beta sandwi 71.6 4.8 0.00017 31.1 4.6 32 8-40 14-49 (110)
218 1b78_A Pyrophosphatase; struct 70.3 1.6 5.6E-05 37.7 1.7 81 11-107 7-94 (193)
219 3cg4_A Response regulator rece 70.0 32 0.0011 25.8 9.5 35 7-43 2-36 (142)
220 1v7r_A Hypothetical protein PH 69.9 5 0.00017 34.5 4.6 78 13-106 1-85 (186)
221 2fmy_A COOA, carbon monoxide o 69.5 23 0.0008 29.3 8.9 65 218-284 30-97 (220)
222 3tqu_A Non-canonical purine NT 68.3 1.6 5.3E-05 38.2 1.1 75 12-94 4-88 (203)
223 3ezx_A MMCP 1, monomethylamine 67.8 24 0.00081 30.5 8.7 40 10-50 90-132 (215)
224 2rg4_A Uncharacterized protein 66.5 10 0.00035 32.9 6.1 66 218-285 108-203 (216)
225 3mdp_A Cyclic nucleotide-bindi 65.2 19 0.00066 27.2 7.0 68 217-284 31-110 (142)
226 3czc_A RMPB; alpha/beta sandwi 64.7 1.7 5.9E-05 33.7 0.6 20 68-87 17-36 (110)
227 1jlj_A Gephyrin; globular alph 64.6 7.1 0.00024 33.3 4.6 66 8-81 10-91 (189)
228 3uw2_A Phosphoglucomutase/phos 64.1 12 0.00042 36.5 6.7 43 13-55 63-107 (485)
229 3rfq_A Pterin-4-alpha-carbinol 64.0 6.4 0.00022 33.6 4.1 117 8-131 26-170 (185)
230 3dv8_A Transcriptional regulat 63.9 23 0.00078 29.1 7.7 67 217-283 28-105 (220)
231 2khz_A C-MYC-responsive protei 63.6 23 0.00077 29.3 7.5 34 8-42 7-44 (165)
232 3bpz_A Potassium/sodium hyperp 62.9 9.6 0.00033 31.5 5.1 66 218-284 98-168 (202)
233 3eod_A Protein HNR; response r 62.6 31 0.0011 25.4 7.7 35 7-43 2-36 (130)
234 3pzy_A MOG; ssgcid, seattle st 62.5 6.7 0.00023 32.6 3.9 49 28-82 30-80 (164)
235 3gt7_A Sensor protein; structu 62.0 52 0.0018 25.3 9.1 34 9-44 4-37 (154)
236 2f7l_A 455AA long hypothetical 60.9 16 0.00054 35.1 6.8 46 13-58 38-85 (455)
237 2z69_A DNR protein; beta barre 59.8 20 0.0007 27.5 6.2 67 218-284 38-114 (154)
238 1j1l_A Pirin; beta sandwich, c 59.3 29 0.00098 31.6 7.9 88 216-305 172-272 (290)
239 1wqa_A Phospho-sugar mutase; a 58.2 19 0.00064 34.6 6.8 45 13-57 42-88 (455)
240 2yxb_A Coenzyme B12-dependent 57.9 12 0.00041 30.8 4.7 60 10-78 16-78 (161)
241 1p5d_X PMM, phosphomannomutase 57.7 17 0.00059 34.9 6.5 45 13-57 49-95 (463)
242 2d93_A RAP guanine nucleotide 57.0 9.7 0.00033 29.0 3.8 29 234-263 59-87 (134)
243 2ptm_A Hyperpolarization-activ 56.6 18 0.00063 29.6 5.7 66 218-283 97-167 (198)
244 1vp6_A CNBD, cyclic-nucleotide 56.5 17 0.00059 27.4 5.2 64 218-284 37-105 (138)
245 3idb_B CAMP-dependent protein 56.2 30 0.001 27.1 6.8 65 218-282 64-136 (161)
246 2car_A Inosine triphosphate py 55.9 6 0.00021 34.2 2.6 79 13-107 10-95 (196)
247 3kbq_A Protein TA0487; structu 55.6 11 0.00038 31.7 4.2 80 28-136 26-107 (172)
248 3nbm_A PTS system, lactose-spe 55.1 13 0.00045 28.8 4.2 36 8-43 2-39 (108)
249 3e6c_C CPRK, cyclic nucleotide 54.9 51 0.0017 27.8 8.5 67 217-283 34-106 (250)
250 4ev0_A Transcription regulator 54.7 28 0.00096 28.5 6.6 68 217-284 24-100 (216)
251 1y80_A Predicted cobalamin bin 54.7 94 0.0032 26.0 10.1 35 12-47 88-125 (210)
252 3hdg_A Uncharacterized protein 54.5 63 0.0022 23.9 8.8 37 7-45 2-38 (137)
253 3ryp_A Catabolite gene activat 53.8 47 0.0016 26.9 7.9 69 216-284 20-98 (210)
254 1xru_A 4-deoxy-L-threo-5-hexos 53.6 59 0.002 29.6 8.8 59 216-274 183-251 (282)
255 3pna_A CAMP-dependent protein 53.5 25 0.00084 27.4 5.8 64 218-282 64-132 (154)
256 3cg0_A Response regulator rece 53.3 60 0.0021 24.0 7.9 35 7-43 4-38 (140)
257 1wv2_A Thiazole moeity, thiazo 52.9 22 0.00075 32.2 5.8 101 11-123 104-221 (265)
258 2oz6_A Virulence factor regula 52.7 53 0.0018 26.5 8.0 68 217-284 15-95 (207)
259 3ocp_A PRKG1 protein; serine/t 52.3 27 0.00092 26.5 5.7 63 219-282 50-117 (139)
260 4f8a_A Potassium voltage-gated 52.2 27 0.00091 27.0 5.8 65 219-284 54-125 (160)
261 3hv2_A Response regulator/HD d 51.6 26 0.00088 27.0 5.6 37 6-44 8-44 (153)
262 2xxz_A Lysine-specific demethy 51.5 13 0.00046 34.7 4.3 26 254-279 280-305 (332)
263 3kcc_A Catabolite gene activat 51.2 50 0.0017 28.3 7.9 69 216-284 70-148 (260)
264 3b02_A Transcriptional regulat 50.1 32 0.0011 27.9 6.2 64 219-282 3-74 (195)
265 3rpe_A MDAB, modulator of drug 50.0 48 0.0016 28.7 7.5 43 3-45 16-69 (218)
266 3e97_A Transcriptional regulat 49.4 65 0.0022 26.6 8.2 67 216-282 30-105 (231)
267 4hjh_A Phosphomannomutase; str 49.1 30 0.001 33.5 6.6 46 12-57 49-96 (481)
268 3d0s_A Transcriptional regulat 49.0 60 0.0021 26.7 7.9 67 218-284 32-107 (227)
269 3fx3_A Cyclic nucleotide-bindi 47.9 68 0.0023 26.6 8.1 68 217-284 36-112 (237)
270 3mtq_A Putative phosphoenolpyr 47.7 54 0.0019 27.0 7.1 49 13-62 22-73 (159)
271 1yll_A PA5104, conserved hypot 47.1 27 0.00093 30.1 5.3 39 231-270 138-176 (200)
272 2qcs_B CAMP-dependent protein 46.5 48 0.0016 28.6 7.1 64 219-283 66-134 (291)
273 2lci_A Protein OR36; structura 46.1 13 0.00045 28.6 2.7 114 13-136 1-122 (134)
274 3of1_A CAMP-dependent protein 46.1 25 0.00086 29.3 5.0 64 219-283 34-102 (246)
275 2pqq_A Putative transcriptiona 46.0 37 0.0013 25.7 5.6 69 217-285 30-107 (149)
276 1o5l_A Transcriptional regulat 45.8 35 0.0012 28.2 5.8 69 216-284 23-101 (213)
277 2qr3_A Two-component system re 45.7 88 0.003 23.0 9.6 30 12-43 3-32 (140)
278 2fts_A Gephyrin; gephyrin, neu 45.5 18 0.0006 34.7 4.3 48 28-81 211-260 (419)
279 1zyb_A Transcription regulator 44.7 70 0.0024 26.6 7.7 68 218-285 46-123 (232)
280 1tvm_A PTS system, galactitol- 44.7 32 0.0011 26.4 5.0 34 8-41 17-53 (113)
281 3ukn_A Novel protein similar t 44.5 39 0.0013 27.9 5.9 67 217-284 100-173 (212)
282 3ixl_A Amdase, arylmalonate de 44.4 68 0.0023 27.9 7.7 65 13-83 118-194 (240)
283 3of1_A CAMP-dependent protein 44.1 35 0.0012 28.4 5.6 53 232-284 165-222 (246)
284 3nbm_A PTS system, lactose-spe 44.1 8.5 0.00029 29.9 1.5 23 68-90 5-27 (108)
285 3fro_A GLGA glycogen synthase; 43.7 24 0.00083 31.9 4.8 35 11-45 1-42 (439)
286 3gx1_A LIN1832 protein; APC633 43.5 60 0.0021 25.7 6.6 65 11-79 3-71 (130)
287 3hzh_A Chemotaxis response reg 43.1 26 0.00088 27.3 4.3 33 8-42 32-64 (157)
288 1g8l_A Molybdopterin biosynthe 42.5 17 0.00058 34.8 3.6 48 28-81 207-256 (411)
289 1tuo_A Putative phosphomannomu 41.3 46 0.0016 32.0 6.6 45 13-57 49-96 (464)
290 3avr_A Lysine-specific demethy 41.0 23 0.00078 35.2 4.3 35 254-289 339-373 (531)
291 1dgw_Y Canavalin; duplicated s 40.9 48 0.0016 25.0 5.3 25 254-278 7-31 (93)
292 2lpm_A Two-component response 40.5 23 0.00077 27.8 3.5 33 9-43 5-37 (123)
293 3ihk_A Thiamin pyrophosphokina 40.2 81 0.0028 27.2 7.4 62 14-79 20-99 (218)
294 4b4k_A N5-carboxyaminoimidazol 39.9 37 0.0013 28.9 4.9 123 8-137 16-154 (181)
295 1kfi_A Phosphoglucomutase 1; p 39.8 61 0.0021 32.0 7.3 46 14-59 60-110 (572)
296 3dn7_A Cyclic nucleotide bindi 39.8 47 0.0016 26.7 5.6 67 218-284 33-109 (194)
297 3gyd_A CNMP-BD protein, cyclic 39.4 65 0.0022 26.1 6.4 67 217-283 64-139 (187)
298 1uz5_A MOEA protein, 402AA lon 39.4 20 0.00069 34.1 3.6 93 29-137 211-321 (402)
299 2i2x_B MTAC, methyltransferase 39.2 34 0.0012 30.2 4.9 36 11-47 122-160 (258)
300 2l2q_A PTS system, cellobiose- 38.6 22 0.00075 27.1 3.1 31 11-41 3-35 (109)
301 4ava_A Lysine acetyltransferas 38.5 74 0.0025 28.1 7.1 65 218-282 39-111 (333)
302 3i42_A Response regulator rece 37.8 80 0.0027 22.9 6.3 31 12-44 3-33 (127)
303 4fle_A Esterase; structural ge 37.5 45 0.0015 26.7 5.1 100 28-132 21-161 (202)
304 3h5i_A Response regulator/sens 37.3 1.3E+02 0.0043 22.4 8.1 31 11-43 4-34 (140)
305 3c48_A Predicted glycosyltrans 36.6 33 0.0011 31.3 4.5 40 6-45 14-66 (438)
306 4gi5_A Quinone reductase; prot 36.5 34 0.0012 30.9 4.4 36 11-46 21-63 (280)
307 4ask_A Lysine-specific demethy 36.4 86 0.0029 30.9 7.5 33 254-287 314-346 (510)
308 2zay_A Response regulator rece 36.4 65 0.0022 24.2 5.6 33 9-43 5-37 (147)
309 2z0f_A Putative phosphoglucomu 36.4 58 0.002 31.7 6.5 45 14-58 64-113 (524)
310 2qxy_A Response regulator; reg 36.1 1.1E+02 0.0036 22.8 6.8 31 11-43 3-33 (142)
311 2iuy_A Avigt4, glycosyltransfe 36.0 35 0.0012 30.1 4.5 36 12-47 3-56 (342)
312 3shr_A CGMP-dependent protein 36.0 46 0.0016 28.9 5.2 63 219-282 66-133 (299)
313 1wu2_A MOEA protein, molybdopt 35.2 19 0.00064 34.3 2.6 47 28-80 214-262 (396)
314 4grd_A N5-CAIR mutase, phospho 35.1 87 0.003 26.4 6.4 80 13-100 15-101 (173)
315 3p0r_A Azoreductase; structura 34.9 56 0.0019 27.6 5.4 100 11-139 3-123 (211)
316 3s99_A Basic membrane lipoprot 34.8 1.7E+02 0.006 26.8 9.3 100 7-120 21-131 (356)
317 2qs9_A Retinoblastoma-binding 34.7 1.4E+02 0.0048 23.4 7.7 107 26-139 23-157 (194)
318 2gek_A Phosphatidylinositol ma 34.7 36 0.0012 30.5 4.4 38 9-46 17-60 (406)
319 3to5_A CHEY homolog; alpha(5)b 34.6 73 0.0025 25.0 5.8 32 10-43 10-41 (134)
320 2pln_A HP1043, response regula 33.4 1.4E+02 0.0049 21.9 8.8 34 8-43 14-47 (137)
321 3iwz_A CAP-like, catabolite ac 33.1 89 0.003 25.6 6.4 69 216-284 35-113 (230)
322 3r0j_A Possible two component 33.0 66 0.0022 27.2 5.6 33 10-44 21-53 (250)
323 2zcw_A TTHA1359, transcription 33.0 63 0.0022 26.2 5.3 67 218-284 8-84 (202)
324 3tnp_B CAMP-dependent protein 32.7 1.6E+02 0.0053 27.5 8.7 66 217-282 170-243 (416)
325 3m6m_D Sensory/regulatory prot 32.6 1E+02 0.0034 23.3 6.2 33 10-44 12-44 (143)
326 3p9z_A Uroporphyrinogen III co 32.5 1.4E+02 0.0047 25.3 7.7 103 15-130 114-221 (229)
327 2xed_A Putative maleate isomer 32.4 1.1E+02 0.0038 27.0 7.2 65 13-82 147-221 (273)
328 3ilh_A Two component response 32.3 1.5E+02 0.0051 21.8 10.3 34 9-44 6-41 (146)
329 2jba_A Phosphate regulon trans 32.2 67 0.0023 23.3 4.9 30 12-43 2-31 (127)
330 2htm_A Thiazole biosynthesis p 32.1 28 0.00096 31.5 3.1 80 34-123 120-212 (268)
331 2gau_A Transcriptional regulat 32.0 90 0.0031 25.7 6.3 68 216-283 34-110 (232)
332 3bul_A Methionine synthase; tr 32.0 33 0.0011 34.4 3.8 36 11-47 97-135 (579)
333 2rjn_A Response regulator rece 31.9 1.6E+02 0.0056 22.1 11.1 36 6-43 1-36 (154)
334 2fqx_A Membrane lipoprotein TM 31.9 2.5E+02 0.0086 24.7 9.6 81 12-98 4-93 (318)
335 2vzf_A NADH-dependent FMN redu 31.7 1.1E+02 0.0038 25.1 6.7 35 12-46 2-44 (197)
336 3q9s_A DNA-binding response re 31.5 2.3E+02 0.008 23.8 9.0 30 12-43 37-66 (249)
337 3kp1_A D-ornithine aminomutase 31.5 20 0.00069 36.7 2.2 40 11-50 601-646 (763)
338 3f6c_A Positive transcription 31.4 46 0.0016 24.6 3.9 29 12-42 1-29 (134)
339 1ys7_A Transcriptional regulat 31.0 66 0.0023 26.5 5.2 32 10-43 5-36 (233)
340 1o7f_A CAMP-dependent RAP1 gua 31.0 52 0.0018 30.7 5.0 64 219-282 365-434 (469)
341 1k7k_A Hypothetical protein YG 30.8 31 0.001 30.3 3.0 74 13-94 24-107 (221)
342 3lfh_A Manxa, phosphotransfera 30.5 70 0.0024 25.7 5.0 49 13-62 4-56 (144)
343 2qcs_B CAMP-dependent protein 30.4 94 0.0032 26.6 6.3 64 219-282 184-257 (291)
344 3lte_A Response regulator; str 30.1 80 0.0027 23.1 5.1 32 11-44 5-36 (132)
345 1tmy_A CHEY protein, TMY; chem 29.9 68 0.0023 23.0 4.6 29 12-42 2-30 (120)
346 1vkr_A Mannitol-specific PTS s 29.8 42 0.0014 26.5 3.4 29 10-39 11-43 (125)
347 3pmg_A Alpha-D-glucose-1,6-bis 29.6 1E+02 0.0034 30.5 7.0 46 13-58 54-104 (561)
348 2rdm_A Response regulator rece 29.4 92 0.0031 22.6 5.3 30 12-43 5-34 (132)
349 1su1_A Hypothetical protein YF 29.3 50 0.0017 27.8 4.1 37 9-45 22-60 (208)
350 3gl9_A Response regulator; bet 29.2 1.6E+02 0.0056 21.2 6.9 30 13-44 3-32 (122)
351 1wgp_A Probable cyclic nucleot 29.0 12 0.0004 28.4 0.0 50 233-282 47-115 (137)
352 3la7_A Global nitrogen regulat 28.9 1.1E+02 0.0038 25.6 6.4 68 217-284 45-123 (243)
353 3kto_A Response regulator rece 28.2 73 0.0025 23.7 4.6 33 11-45 5-37 (136)
354 3o8m_A Hexokinase; rnaseh-like 28.0 36 0.0012 33.3 3.3 63 19-87 180-242 (485)
355 3gh1_A Predicted nucleotide-bi 28.0 27 0.00091 34.0 2.3 56 26-88 127-194 (462)
356 4a6d_A Hydroxyindole O-methylt 27.8 28 0.00096 31.9 2.4 40 72-111 184-223 (353)
357 1uf3_A Hypothetical protein TT 27.7 53 0.0018 26.9 4.0 35 11-45 4-40 (228)
358 2gkg_A Response regulator homo 27.6 1.6E+02 0.0056 20.8 9.1 29 13-43 6-34 (127)
359 2xij_A Methylmalonyl-COA mutas 27.6 67 0.0023 33.3 5.3 60 11-78 603-664 (762)
360 2oqr_A Sensory transduction pr 27.5 2.5E+02 0.0084 22.8 8.7 31 11-43 3-33 (230)
361 1e2b_A Enzyme IIB-cellobiose; 27.4 63 0.0022 24.5 4.0 30 12-41 3-34 (106)
362 1jbe_A Chemotaxis protein CHEY 27.4 1.1E+02 0.0036 22.2 5.3 31 10-42 2-33 (128)
363 1bdg_A Hexokinase; phosphotran 27.3 35 0.0012 32.9 3.1 62 20-87 168-229 (451)
364 3lua_A Response regulator rece 27.1 1.1E+02 0.0036 22.7 5.4 32 11-44 3-35 (140)
365 3otg_A CALG1; calicheamicin, T 27.0 63 0.0022 29.1 4.7 40 8-47 16-57 (412)
366 2r60_A Glycosyl transferase, g 26.9 57 0.0019 30.6 4.5 34 11-44 6-56 (499)
367 3oti_A CALG3; calicheamicin, T 26.5 48 0.0016 30.1 3.8 37 10-46 18-56 (398)
368 3dkw_A DNR protein; CRP-FNR, H 26.5 40 0.0014 27.7 3.0 67 218-284 35-111 (227)
369 3ipr_A PTS system, IIA compone 26.4 79 0.0027 25.5 4.7 49 13-62 2-54 (150)
370 3f6p_A Transcriptional regulat 26.2 1.8E+02 0.0062 20.8 7.3 29 13-43 3-31 (120)
371 3snk_A Response regulator CHEY 26.0 68 0.0023 23.8 4.0 34 10-45 12-46 (135)
372 3sqn_A Conserved domain protei 26.0 26 0.00089 34.0 1.9 19 67-85 396-414 (485)
373 1wek_A Hypothetical protein TT 26.0 45 0.0015 28.9 3.3 48 34-88 32-86 (217)
374 1f0k_A MURG, UDP-N-acetylgluco 25.8 61 0.0021 28.6 4.3 35 12-46 6-42 (364)
375 1o7f_A CAMP-dependent RAP1 gua 25.6 1.6E+02 0.0055 27.3 7.4 65 219-283 69-143 (469)
376 1req_A Methylmalonyl-COA mutas 25.3 61 0.0021 33.4 4.6 58 11-78 595-656 (727)
377 2j48_A Two-component sensor ki 25.3 1.2E+02 0.0041 21.1 5.1 30 13-44 2-31 (119)
378 3mel_A Thiamin pyrophosphokina 25.2 1E+02 0.0036 26.6 5.5 62 14-79 24-103 (222)
379 4fzr_A SSFS6; structural genom 25.1 58 0.002 29.5 4.0 38 8-45 11-50 (398)
380 2hqb_A Transcriptional activat 25.1 2.9E+02 0.01 23.9 8.7 81 12-98 5-94 (296)
381 3bq9_A Predicted rossmann fold 25.0 68 0.0023 31.2 4.5 58 24-88 123-192 (460)
382 2q62_A ARSH; alpha/beta, flavo 25.0 3.3E+02 0.011 23.6 8.9 54 9-62 31-98 (247)
383 1zh2_A KDP operon transcriptio 24.9 1.1E+02 0.0039 21.6 5.0 29 13-43 2-30 (121)
384 4din_B CAMP-dependent protein 24.4 90 0.0031 28.7 5.3 88 219-306 275-372 (381)
385 3f4w_A Putative hexulose 6 pho 24.3 78 0.0027 26.3 4.4 49 13-62 1-49 (211)
386 1qkk_A DCTD, C4-dicarboxylate 24.2 1.1E+02 0.0038 23.2 5.1 31 11-43 2-32 (155)
387 1s8n_A Putative antiterminator 24.1 96 0.0033 25.0 4.9 32 9-42 10-41 (205)
388 3crn_A Response regulator rece 24.1 97 0.0033 22.8 4.6 30 12-43 3-32 (132)
389 2hqr_A Putative transcriptiona 23.9 2.2E+02 0.0076 23.0 7.2 29 13-43 1-29 (223)
390 3t6k_A Response regulator rece 23.9 2.2E+02 0.0075 21.0 6.9 30 12-43 4-33 (136)
391 1p99_A Hypothetical protein PG 23.8 2.2E+02 0.0074 25.4 7.6 53 11-73 39-91 (295)
392 3j21_Z 50S ribosomal protein L 23.4 1.2E+02 0.004 22.5 4.8 32 14-46 34-66 (99)
393 1k66_A Phytochrome response re 23.3 2.2E+02 0.0076 20.8 8.6 32 10-43 4-37 (149)
394 3jte_A Response regulator rece 23.2 2.2E+02 0.0077 20.8 9.0 30 12-43 3-32 (143)
395 1s4c_A Protein HI0227; double- 23.0 87 0.003 25.3 4.3 24 253-276 112-135 (155)
396 1iow_A DD-ligase, DDLB, D-ALA\ 22.9 1.3E+02 0.0044 26.0 5.8 38 12-49 2-45 (306)
397 3kws_A Putative sugar isomeras 22.7 1.1E+02 0.0039 26.2 5.4 51 11-62 24-75 (287)
398 3ajx_A 3-hexulose-6-phosphate 22.7 50 0.0017 27.4 2.8 49 13-62 1-49 (207)
399 1k68_A Phytochrome response re 22.7 1.4E+02 0.0047 21.7 5.2 30 12-43 2-33 (140)
400 3lm8_A Thiamine pyrophosphokin 22.4 1.7E+02 0.0059 25.1 6.4 61 14-79 26-104 (222)
401 1yua_A Topoisomerase I; gene-r 22.4 29 0.00098 27.4 1.1 25 69-94 24-48 (122)
402 2dgd_A 223AA long hypothetical 22.3 1.3E+02 0.0045 25.3 5.6 35 13-48 109-143 (223)
403 3rqi_A Response regulator prot 22.3 2.5E+02 0.0086 22.1 7.1 31 11-43 6-36 (184)
404 3egl_A DEGV family protein; al 22.3 72 0.0025 28.5 4.0 101 11-134 2-114 (277)
405 3na5_A Phosphoglucomutase; iso 22.1 1.6E+02 0.0054 29.1 6.8 45 14-58 104-153 (570)
406 4db3_A Glcnac kinase, N-acetyl 22.0 59 0.002 29.3 3.4 59 22-88 108-166 (327)
407 1mvo_A PHOP response regulator 21.9 1.5E+02 0.0052 21.5 5.3 30 12-43 3-32 (136)
408 3tsa_A SPNG, NDP-rhamnosyltran 21.8 72 0.0025 28.6 3.9 35 12-46 1-37 (391)
409 2pl1_A Transcriptional regulat 21.7 1.5E+02 0.005 21.1 5.1 29 13-43 1-29 (121)
410 3k94_A Thiamin pyrophosphokina 21.7 1.8E+02 0.0061 25.1 6.3 61 14-79 25-103 (223)
411 3kuu_A Phosphoribosylaminoimid 21.7 1.6E+02 0.0055 24.8 5.7 77 15-99 17-100 (174)
412 2b4a_A BH3024; flavodoxin-like 21.6 1.5E+02 0.0053 21.7 5.3 33 9-43 12-44 (138)
413 3td9_A Branched chain amino ac 21.6 1.9E+02 0.0063 25.5 6.7 62 13-80 150-215 (366)
414 1o2d_A Alcohol dehydrogenase, 21.6 2.2E+02 0.0074 26.2 7.3 61 13-77 41-107 (371)
415 3shr_A CGMP-dependent protein 21.4 1.4E+02 0.0048 25.7 5.7 50 233-282 198-257 (299)
416 2yvt_A Hypothetical protein AQ 21.4 67 0.0023 27.1 3.5 35 11-45 4-40 (260)
417 3esg_A HUTD, putative uncharac 21.4 1.1E+02 0.0038 26.1 4.8 36 229-270 139-174 (193)
418 3gdw_A Sigma-54 interaction do 21.3 2.3E+02 0.0078 22.5 6.5 66 12-79 4-73 (139)
419 1srr_A SPO0F, sporulation resp 21.1 1.5E+02 0.0052 21.2 5.1 29 13-43 4-32 (124)
420 3grc_A Sensor protein, kinase; 21.1 2.5E+02 0.0084 20.5 12.0 32 11-44 5-36 (140)
421 2gwr_A DNA-binding response re 21.1 1.5E+02 0.0051 24.6 5.6 33 11-45 4-36 (238)
422 2bgc_A PRFA; bacterial infecti 21.0 1.2E+02 0.0043 25.1 5.1 63 218-281 21-95 (238)
423 2qv7_A Diacylglycerol kinase D 21.0 2.6E+02 0.0087 25.1 7.6 45 15-60 28-76 (337)
424 3epq_A Putative fructokinase; 20.9 65 0.0022 28.8 3.4 59 22-88 85-143 (302)
425 1t5b_A Acyl carrier protein ph 20.9 2.4E+02 0.0081 22.6 6.7 38 13-50 2-49 (201)
426 1req_B Methylmalonyl-COA mutas 20.8 66 0.0023 32.6 3.7 60 11-79 508-570 (637)
427 1dcf_A ETR1 protein; beta-alph 20.6 2.1E+02 0.007 20.9 5.9 31 11-43 6-36 (136)
428 4f7z_A RAP guanine nucleotide 20.6 95 0.0032 32.5 5.0 62 221-282 367-434 (999)
429 3d8t_A Uroporphyrinogen-III sy 20.3 3.2E+02 0.011 23.7 8.0 107 14-132 158-279 (286)
430 3a10_A Response regulator; pho 20.3 1.7E+02 0.0059 20.5 5.2 29 13-43 2-30 (116)
431 3hjn_A DTMP kinase, thymidylat 20.2 1.9E+02 0.0067 23.8 6.1 27 18-44 7-34 (197)
432 2yhx_A Hexokinase B; transfera 20.0 29 0.001 33.6 0.9 107 25-141 164-304 (457)
No 1
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=100.00 E-value=1.6e-58 Score=391.18 Aligned_cols=141 Identities=35% Similarity=0.547 Sum_probs=133.9
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCC-----CCcchhHHHHHHhhcCCCCCCCceEEEEecCchhhhhhhc
Q 021654 13 LKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTS-----DYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGVAIFAN 87 (309)
Q Consensus 13 mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~G~~-----~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~~iaaN 87 (309)
|||+|||||+||+||+.|++||+++||||+|+|++ |||++|.+||++|.+ |+++|||||||||+||||+||
T Consensus 1 MkI~igsDhaG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~V~~----g~~d~GIliCGTGiG~siaAN 76 (149)
T 3he8_A 1 MKIGIGSDHGGYNLKREIADFLKKRGYEVIDFGTHGNESVDYPDFGLKVAEAVKS----GECDRGIVICGTGLGISIAAN 76 (149)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHT----TSSSEEEEEESSSHHHHHHHH
T ss_pred CEEEEEECchhHHHHHHHHHHHHHCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHc----CCCCEEEEEcCCcHHHHHHhh
Confidence 89999999999999999999999999999999986 599999999999999 999999999999999999999
Q ss_pred CCCceEEEEeCCHHHHHHhHhhcCceEeEeccccCCHHHHHHHHHHHHcCCCCCCCCCCCCChhhhhhhhhhhh
Q 021654 88 KNPGVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEILDTWLKTPFKAPCPASGFKPWEENISCFFDK 161 (309)
Q Consensus 88 K~~giraa~~~~~~~A~~~r~hN~aNvl~lg~~~~~~~~a~~i~~~~l~~~f~~~~p~~~~~~~~~~I~~fl~~ 161 (309)
|+||||||+|+|+++|+|+|+||||||||||+|++|+++|++|+++||+|+|++| +++++.+.|.+++.+
T Consensus 77 Kv~GIRAAl~~d~~sA~~ar~hNnaNVl~lG~rvig~~~A~~iv~~fL~t~F~gg----rh~~Rv~ki~~~e~~ 146 (149)
T 3he8_A 77 KVPGIRAAVCTNSYMARMSREHNDANILALGERVVGLDLALDIVDTWLKAEFQGG----RHATRVGKIGEIEKK 146 (149)
T ss_dssp TSTTCCEEECSSHHHHHHHHHTTCCSEEEEETTTSCHHHHHHHHHHHHHCCCCCT----HHHHHHHHHHHHHHH
T ss_pred cCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCHHHHHHHHHHHHcCCCCCc----chHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999984 667777777766543
No 2
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=100.00 E-value=3.2e-58 Score=395.28 Aligned_cols=147 Identities=34% Similarity=0.518 Sum_probs=134.1
Q ss_pred CCCCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCC-----CCcchhHHHHHHhhcCCCCCCCceEEEEecCchh
Q 021654 7 AAAPHPLKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTS-----DYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVG 81 (309)
Q Consensus 7 ~~~~~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~G~~-----~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G 81 (309)
+...++|||+|||||+||+||+.|++||+++||||+|||++ |||++|.+||++|.+ |+++|||||||||+|
T Consensus 15 ~~~~~~MkIaIgsDhaG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~V~~----g~~d~GIliCGTGiG 90 (169)
T 3ph3_A 15 VPRGSHMKIGIGSDHGGYNLKREIADFLKKRGYEVIDFGTHGNESVDYPDFGLKVAEAVKS----GECDRGIVICGTGLG 90 (169)
T ss_dssp ------CEEEEEECGGGHHHHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHT----TSSSEEEEEESSSHH
T ss_pred cccCCCCEEEEEeCchHHHHHHHHHHHHHHCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHc----CCCCEEEEEcCCcHH
Confidence 45567899999999999999999999999999999999985 599999999999999 999999999999999
Q ss_pred hhhhhcCCCceEEEEeCCHHHHHHhHhhcCceEeEeccccCCHHHHHHHHHHHHcCCCCCCCCCCCCChhhhhhhhhhhh
Q 021654 82 VAIFANKNPGVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEILDTWLKTPFKAPCPASGFKPWEENISCFFDK 161 (309)
Q Consensus 82 ~~iaaNK~~giraa~~~~~~~A~~~r~hN~aNvl~lg~~~~~~~~a~~i~~~~l~~~f~~~~p~~~~~~~~~~I~~fl~~ 161 (309)
|||+|||+||||||+|+|+++|+|+|+||||||||||+|++|+++|++||++||+|+|++| +++++++.|.+++.+
T Consensus 91 ~sIaANKv~GIRAAlc~d~~sA~~aR~hNnANVL~lG~Rvig~~lA~~Iv~~fL~t~F~gg----Rh~~Rv~kI~~~e~~ 166 (169)
T 3ph3_A 91 ISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERVVGLDLALDIVDTWLKAEFQGG----RHATRVGKIGEIEKK 166 (169)
T ss_dssp HHHHHTTSTTCCEEECSSHHHHHHHHHTTCCSEEEEETTTSCHHHHHHHHHHHHHCCCCCT----HHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCHHHHHHHHHHHHcCCCCCC----chHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999984 667777777766543
No 3
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=100.00 E-value=1.6e-58 Score=395.61 Aligned_cols=143 Identities=32% Similarity=0.443 Sum_probs=127.3
Q ss_pred CCCCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCC-----CCcchhHHHHHHhhcCCCCCCCceEEEEecCchh
Q 021654 7 AAAPHPLKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTS-----DYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVG 81 (309)
Q Consensus 7 ~~~~~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~G~~-----~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G 81 (309)
.+.+.+|||+|||||+||+||+.|++||+++||||+|||++ |||+||.+||++|.+ |+++|||||||||+|
T Consensus 16 ~~~~~~MkIaIgsDhaG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYPd~a~~va~~V~~----g~~d~GIliCGTGiG 91 (166)
T 3s5p_A 16 TQGPGSMKVAFASDHGGRDLRMFLQQRASAHGYEVMDLGTESDASVDYPDFAKIGCEAVTS----GRADCCILVCGTGIG 91 (166)
T ss_dssp ---CTTCEEEEEECGGGHHHHHHHHHHHHHTTCEEEEEEC--------CHHHHHHHHHHHT----TSCSEEEEEESSSHH
T ss_pred CCCCCceEEEEEECchHHHHHHHHHHHHHHCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHc----CCCcEEEEEcCCcHH
Confidence 34556699999999999999999999999999999999986 599999999999999 999999999999999
Q ss_pred hhhhhcCCCceEEEEeCCHHHHHHhHhhcCceEeEeccccCCHHHHHHHHHHHHcCCCCCCCCCCCCChhhhhhhh
Q 021654 82 VAIFANKNPGVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEILDTWLKTPFKAPCPASGFKPWEENISC 157 (309)
Q Consensus 82 ~~iaaNK~~giraa~~~~~~~A~~~r~hN~aNvl~lg~~~~~~~~a~~i~~~~l~~~f~~~~p~~~~~~~~~~I~~ 157 (309)
|||+|||+||||||+|+|+++|+|+|+||||||||||+|++|+++|++|+++||+|+|++| +++++++.|..
T Consensus 92 ~sIaANKv~GIRAAlc~d~~sA~laR~hNnANVL~lG~Rvig~~lA~~Iv~~fL~t~F~gg----RH~~RV~kI~~ 163 (166)
T 3s5p_A 92 ISIAANKMKGIRCALCSTEYDAEMARKHNNANALALGGRTTGPEVAASILSRFLSTNFEGG----RHAARIAKISA 163 (166)
T ss_dssp HHHHHHTSTTCCEEECSSHHHHHHHHHTTCCCEEEEETTTSCHHHHHHHHHHHHHCCCCHH----HHHTCCCC---
T ss_pred HHHHhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCHHHHHHHHHHHHcCCCCCc----chHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999985 44444444443
No 4
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=100.00 E-value=4.5e-58 Score=398.33 Aligned_cols=150 Identities=29% Similarity=0.420 Sum_probs=137.6
Q ss_pred cCCCC-CCcEEEEEeCcccHHHHHHHHHHHHhCC--CcEEEecCC------CCcchhHHHHHHhhcCCCCCCCceEEEEe
Q 021654 6 AAAAP-HPLKIIAGADSFGAELKDALVSHLRSLN--IDVEDLGTS------DYYSIGAEVGRRVSSSDSSDTTTRGLVAC 76 (309)
Q Consensus 6 ~~~~~-~~mki~i~~D~~g~~lk~~l~~~l~~~g--~ev~d~G~~------~y~~~a~~va~~v~~~~~~~~~~~gi~~C 76 (309)
|++.+ ++|||+|||||+||+||+.|++||+++| |||+|||++ |||+||.+||++|.+ |+++||||||
T Consensus 22 ~~~~~~~~MkIaIgsDHaG~~LK~~i~~~L~~~G~g~eV~D~G~~s~~e~~DYPd~a~~vA~~V~~----ge~d~GIliC 97 (184)
T 3sgw_A 22 MAATPLPPLRLAIACDDAGVSYKEALKAHLSDNPLVSSITDVGVTSTTDKTAYPHVAIQAAQLIKD----GKVDRALMIC 97 (184)
T ss_dssp -----CCCEEEEEEECGGGHHHHHHHHHHHTTCTTEEEEEECSCCSTTCCCCHHHHHHHHHHHHHT----TSCSEEEEEE
T ss_pred cCCCCCCCcEEEEEECchhHHHHHHHHHHHHhCCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHc----CCCcEEEEEc
Confidence 45555 8899999999999999999999999999 799999986 599999999999999 9999999999
Q ss_pred cCchhhhhhhcCCCceEEEEeCCHHHHHHhHhhcCceEeEeccccCCHHHHHHHHHHHHcCCCCCCCCCCCCChhhhhhh
Q 021654 77 GTGVGVAIFANKNPGVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEILDTWLKTPFKAPCPASGFKPWEENIS 156 (309)
Q Consensus 77 gtG~G~~iaaNK~~giraa~~~~~~~A~~~r~hN~aNvl~lg~~~~~~~~a~~i~~~~l~~~f~~~~p~~~~~~~~~~I~ 156 (309)
|||+||||+|||+||||||+|+|+++|+|+|+||||||||||+|++|+++|++||++||+|+|++ .++++++++.|.
T Consensus 98 GTGiG~sIaANKv~GIRAAlc~d~~sA~laR~HNnANVL~lG~Rvig~elA~~Ivd~fL~t~Feg---ggRH~~RV~kI~ 174 (184)
T 3sgw_A 98 GTGLGVAISANKVPGIRAVTAHDTFSVERAILSNDAQVLCFGQRVIGIELAKRLAGEWLTYRFDQ---KSASAQKVQAIS 174 (184)
T ss_dssp SSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHTTCCSEEEEETTTSCHHHHHHHHHHHTTCCCCT---TSHHHHHHHHHH
T ss_pred CCcHHHhhhhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEchhhcCHHHHHHHHHHHHcCCCCC---CchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999996 357788888888
Q ss_pred hhhhhc
Q 021654 157 CFFDKS 162 (309)
Q Consensus 157 ~fl~~s 162 (309)
+++.+.
T Consensus 175 ~~E~~~ 180 (184)
T 3sgw_A 175 DYEKKF 180 (184)
T ss_dssp HHHTTC
T ss_pred HHHHhh
Confidence 776553
No 5
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=100.00 E-value=6.1e-58 Score=387.93 Aligned_cols=140 Identities=34% Similarity=0.495 Sum_probs=133.1
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCC-----CCcchhHHHHHHhhcCCCCCCCceEEEEecCchhhhhhhc
Q 021654 13 LKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTS-----DYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGVAIFAN 87 (309)
Q Consensus 13 mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~G~~-----~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~~iaaN 87 (309)
|||+|||||+||+||+.|++||+++||||+|+|++ |||++|.+||++|.+ |+++|||||||||+||||+||
T Consensus 2 MkIaigsDhaG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~V~~----g~~d~GIliCGTGiG~siaAN 77 (149)
T 2vvr_A 2 KKIAFGCDHVGFILKHEIVAHLVERGVEVIDKGTWSSERTDYPHYASQVALAVAG----GEVDGGILICGTGVGISIAAN 77 (149)
T ss_dssp CEEEEEECTTGGGGHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHT----TSSSEEEEEESSSHHHHHHHH
T ss_pred cEEEEEeCchhHHHHHHHHHHHHHCCCEEEEeCCCCCCCCChHHHHHHHHHHHHc----CCCceEEEEeCCcHHHHHHHh
Confidence 89999999999999999999999999999999985 599999999999999 999999999999999999999
Q ss_pred CCCceEEEEeCCHHHHHHhHhhcCceEeEeccccCCHHHHHHHHHHHHcCCCCCCCCCCCCChhhhhhhhhhh
Q 021654 88 KNPGVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEILDTWLKTPFKAPCPASGFKPWEENISCFFD 160 (309)
Q Consensus 88 K~~giraa~~~~~~~A~~~r~hN~aNvl~lg~~~~~~~~a~~i~~~~l~~~f~~~~p~~~~~~~~~~I~~fl~ 160 (309)
|+||||||+|+|+++|+|+|+||||||||||+|++|+++|++|+++||+|+|++| +++++++.|..++.
T Consensus 78 Kv~GIRAal~~d~~sA~~ar~hNnaNVl~lG~rvig~ela~~iv~~fL~t~f~gg----rh~~Rv~ki~~~e~ 146 (149)
T 2vvr_A 78 KFAGIRAVVCSEPYSAQLSRQNNDTNVLAFGSRVVGLELAKMIVDAWLGAQYEGG----RHQQRVEAITAIEQ 146 (149)
T ss_dssp TSTTCCEEECSSHHHHHHHHHHHCCCEEEEETTTBCHHHHHHHHHHHHHCCCCCT----THHHHHHHHHHHHT
T ss_pred cCCCeEEEEeCCHHHHHHHHHhCCCcEEEECccccCHHHHHHHHHHHHcCCCCCc----cHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999974 77777777766654
No 6
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=100.00 E-value=2.2e-57 Score=392.47 Aligned_cols=145 Identities=26% Similarity=0.359 Sum_probs=135.3
Q ss_pred CCCcEEEEEeCcccHHHHHHHHHHHHh--CCCcEEEecCC-----CCcchhHHHHHHhhcCCCCCCCceEEEEecCchhh
Q 021654 10 PHPLKIIAGADSFGAELKDALVSHLRS--LNIDVEDLGTS-----DYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGV 82 (309)
Q Consensus 10 ~~~mki~i~~D~~g~~lk~~l~~~l~~--~g~ev~d~G~~-----~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~ 82 (309)
++.|||+|||||+||+||+.|++||++ +||||+|||++ |||+||.+||++|.+ |++||||||||||+||
T Consensus 20 ~M~MkIaIgsDhaG~~lK~~i~~~L~~~~~G~eV~D~G~~s~~s~DYPd~a~~vA~~V~~----g~~d~GIliCGTGiG~ 95 (179)
T 3k7p_A 20 HMTRRVAIGTDHPAFAIHENLILYVKEAGDEFVPVYCGPKTAESVDYPDFASRVAEMVAR----KEVEFGVLAAGSGIGM 95 (179)
T ss_dssp -CCEEEEEEECTGGGGGHHHHHHHHHHTCTTEEEEECSCSSSSCCCHHHHHHHHHHHHHT----TSSSEEEEEESSSHHH
T ss_pred cCceEEEEEECchHHHHHHHHHHHHHhcCCCCeEEEcCCCCCCCCCHHHHHHHHHHHHHc----CCCCEEEEEccCcHHH
Confidence 456999999999999999999999999 99999999985 599999999999999 9999999999999999
Q ss_pred hhhhcCCCceEEEEeCCHHHHHHhHhhcCceEeEeccccCCHHHHHHHHHHHHcCCCCCCCCCCCCChhhhhhhhhhhh
Q 021654 83 AIFANKNPGVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEILDTWLKTPFKAPCPASGFKPWEENISCFFDK 161 (309)
Q Consensus 83 ~iaaNK~~giraa~~~~~~~A~~~r~hN~aNvl~lg~~~~~~~~a~~i~~~~l~~~f~~~~p~~~~~~~~~~I~~fl~~ 161 (309)
||+|||+||||||+|+|+++|+|+|+||||||||||+|++|+++|++|+++||+|+|++ .++++++++.|..++.+
T Consensus 96 sIaANKv~GIRAAlc~d~~sA~laR~HNnANVL~lG~Rvig~elA~~Ivd~fL~t~Feg---~gRH~~RV~kI~~~E~~ 171 (179)
T 3k7p_A 96 SIAANKVPGVRAALCHDHYTAAMSRIHNDANIVCVGERTTGVEVIREIIITFLQTPFSG---EERHVRRIEKIRAIEAS 171 (179)
T ss_dssp HHHHHTSTTCCEEECCSHHHHHHHHHTTCCSEEEEETTTSCHHHHHHHHHHHHHCCCCC---CHHHHHHHHHHHHHHHH
T ss_pred hhHhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCHHHHHHHHHHHHcCCCCC---CCchHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999997 34667777777766554
No 7
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=100.00 E-value=3.4e-57 Score=387.88 Aligned_cols=143 Identities=25% Similarity=0.399 Sum_probs=135.0
Q ss_pred CcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCC------CCcchhHHHHHHhhcCCCCCCCceEEEEecCchhhhhh
Q 021654 12 PLKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTS------DYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGVAIF 85 (309)
Q Consensus 12 ~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~G~~------~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~~ia 85 (309)
+|||+|||||+||+||+.|++||+++||||+|+|++ |||++|.+||++|.+ |+++|||||||||+||||+
T Consensus 3 ~MkIaigsDhaG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~~dYpd~a~~va~~V~~----g~~d~GIliCGTGiG~sia 78 (162)
T 2vvp_A 3 GMRVYLGADHAGYELKQRIIEHLKQTGHEPIDCGALRYDADDDYPAFCIAAATRTVA----DPGSLGIVLGGSGNGEQIA 78 (162)
T ss_dssp CCEEEEEECHHHHHHHHHHHHHHHHTTCEEEECSCCSCCTTCCHHHHHHHHHHHHHH----STTCEEEEEESSSHHHHHH
T ss_pred CCEEEEEeCchhHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCChHHHHHHHHHHHHc----CCCceEEEEeCCcHHHHHH
Confidence 389999999999999999999999999999999974 599999999999999 9999999999999999999
Q ss_pred hcCCCceEEEEeCCHHHHHHhHhhcCceEeEeccccCCHHHHHHHHHHHHcCCCCCCCCCCCCChhhhhhhhhhhh
Q 021654 86 ANKNPGVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEILDTWLKTPFKAPCPASGFKPWEENISCFFDK 161 (309)
Q Consensus 86 aNK~~giraa~~~~~~~A~~~r~hN~aNvl~lg~~~~~~~~a~~i~~~~l~~~f~~~~p~~~~~~~~~~I~~fl~~ 161 (309)
|||+||||||+|+|+++|+|+|+||||||||||+|++|+++|++|+++||+|+|++| ++++++.+.|..++.+
T Consensus 79 ANKv~GIRAAl~~d~~sA~~ar~hNnaNVL~lG~rvig~elA~~iv~~fL~t~F~gg---~rh~~Rv~ki~~~e~~ 151 (162)
T 2vvp_A 79 ANKVPGARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAFVTTPWSKA---QRHQRRIDILAEYERT 151 (162)
T ss_dssp HHTSTTCCEEECCSHHHHHHHHHTTCCSEEEEEGGGSCHHHHHHHHHHHHHSCCCCC---HHHHHHHHHHHHHHHH
T ss_pred HhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCHHHHHHHHHHHHcCCCCCC---hhHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999973 4777888878777654
No 8
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=100.00 E-value=1.3e-56 Score=380.82 Aligned_cols=137 Identities=36% Similarity=0.513 Sum_probs=129.0
Q ss_pred CCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCC-----CCcchhHHHHHHhhcCCCCCCCceEEEEecCchhhhhh
Q 021654 11 HPLKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTS-----DYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGVAIF 85 (309)
Q Consensus 11 ~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~G~~-----~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~~ia 85 (309)
...||+|||||+||+||+.|++||+++||||+|+|++ |||++|.+||++|.+ |+++|||||||||+||||+
T Consensus 11 ~~~~i~igsDhaG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~V~~----g~~d~GIliCGTGiG~sia 86 (155)
T 1o1x_A 11 HHVKIAIASDHAAFELKEKVKNYLLGKGIEVEDHGTYSEESVDYPDYAKKVVQSILS----NEADFGILLCGTGLGMSIA 86 (155)
T ss_dssp CCCEEEEEECSTTHHHHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHT----TSCSEEEEEESSSHHHHHH
T ss_pred cceeEEEeeCchHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCChHHHHHHHHHHHHc----CCCceEEEEcCCcHHHHHH
Confidence 3479999999999999999999999999999999984 599999999999999 9999999999999999999
Q ss_pred hcCCCceEEEEeCCHHHHHHhHhhcCceEeEeccccCCHHHHHHHHHHHHcCCCCCCCCCCCCChhhhhh
Q 021654 86 ANKNPGVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEILDTWLKTPFKAPCPASGFKPWEENI 155 (309)
Q Consensus 86 aNK~~giraa~~~~~~~A~~~r~hN~aNvl~lg~~~~~~~~a~~i~~~~l~~~f~~~~p~~~~~~~~~~I 155 (309)
|||+||||||+|+|+++|+|+|+||||||||||+|++|+++|++|+++||+|+|++| +++++.+.|
T Consensus 87 ANKv~GIRAAl~~d~~sA~~ar~hNnANVL~lG~rvig~elA~~Iv~~fL~t~F~gg----Rh~~RV~ki 152 (155)
T 1o1x_A 87 ANRYRGIRAALCLFPDMARLARSHNNANILVLPGRLIGAELAFWIVDTFLSTPFDGG----RHERRIRKI 152 (155)
T ss_dssp HTTSTTCCEEECSSHHHHHHHHHTTCCSEEEEETTTSCHHHHHHHHHHHHHCCCCCT----THHHHHHHH
T ss_pred hhcCCCeEEEEeCCHHHHHHHHHcCCCcEEEECCcccCHHHHHHHHHHHHcCCCCCc----cHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999973 555555544
No 9
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=100.00 E-value=1.8e-56 Score=377.52 Aligned_cols=133 Identities=30% Similarity=0.421 Sum_probs=124.4
Q ss_pred CcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCC------CCcchhHHHHHHhhcCCCCCCCceEEEEecCchhhhhh
Q 021654 12 PLKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTS------DYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGVAIF 85 (309)
Q Consensus 12 ~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~G~~------~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~~ia 85 (309)
+|||+|||||+||+||+.|++||+++||||+|+|++ |||++|.+||++|. +++|||||||||+||||+
T Consensus 7 ~mkI~igsDhaG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~~dYpd~a~~va~~V~------~~d~GIliCGTGiG~sia 80 (148)
T 4em8_A 7 VKRVFLSSDHAGVELRLFLSAYLRDLGCEVFDCGCDPKEHSVDYPDYVHDVVREVS------DTSFGVLICGTGIGMSIA 80 (148)
T ss_dssp CSEEEEEECGGGHHHHHHHHHHHHHTTCEEEECCCCTTCSCCCGGGGTHHHHTTCB------TTBEEEEEESSSHHHHHH
T ss_pred eeEEEEEECchhHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCChHHHHHHHHHHHH------HhCeEEEEccCcHHHHHH
Confidence 489999999999999999999999999999999974 49999999999998 379999999999999999
Q ss_pred hcCCCceEEEEeCCHHHHHHhHhhcCceEeEeccccCCHHHHHHHHHHHHcCCCCCCCCCCCCChhhhh
Q 021654 86 ANKNPGVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEILDTWLKTPFKAPCPASGFKPWEEN 154 (309)
Q Consensus 86 aNK~~giraa~~~~~~~A~~~r~hN~aNvl~lg~~~~~~~~a~~i~~~~l~~~f~~~~p~~~~~~~~~~ 154 (309)
|||+||||||+|+|+++|+|+|+||||||||||+|++|+++|++|+++||+|+|++| +++++.+.
T Consensus 81 ANKv~GIRAAl~~d~~sA~~ar~hNnANVL~lG~rvig~~lA~~iv~~fL~t~F~gg----rh~~Rv~k 145 (148)
T 4em8_A 81 ANRHKNIRAALCSSTMLAKLSREHNDANVLCFGSRYIDPDTAQSVLYTFMTTAFLGG----RHAVRVQK 145 (148)
T ss_dssp HTTSTTCCEEECSSHHHHHHHHHHHCCCEEEEETTTSCHHHHHHHHHHHHHCCCCCT----HHHHHHHH
T ss_pred HhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEchhhhCHHHHHHHHHHHHcCCCCCC----chHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999985 44444443
No 10
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=100.00 E-value=1e-54 Score=387.01 Aligned_cols=150 Identities=20% Similarity=0.263 Sum_probs=139.3
Q ss_pred CcEEEEEeCcccHHHH-----HHHHHHHHhCCCcEEEecCC--------CCcchhHHHHHHhhcCCCCCCCceEEEEecC
Q 021654 12 PLKIIAGADSFGAELK-----DALVSHLRSLNIDVEDLGTS--------DYYSIGAEVGRRVSSSDSSDTTTRGLVACGT 78 (309)
Q Consensus 12 ~mki~i~~D~~g~~lk-----~~l~~~l~~~g~ev~d~G~~--------~y~~~a~~va~~v~~~~~~~~~~~gi~~Cgt 78 (309)
.|||+|||||+ ++|| +.|++||+++||||+|+|++ |||++|.+||++|.+ |+++|||+||||
T Consensus 3 ~MkIaIgsDha-~~lKn~ilk~~i~~~L~~~G~eV~D~G~~s~~d~~s~DYPd~a~~vA~~V~~----g~~d~GIliCGT 77 (216)
T 2ppw_A 3 AMKIALINENS-QASKNHIIYDSLKEATDKKGYQLFNYGMRGEEGESQLTYVQNGLMAAILLNT----KAVDFVVTGCGT 77 (216)
T ss_dssp CCEEEECCCTT-TGGGHHHHHHHHHHHHHHHTCEEEECSCCSCTTCCCCCHHHHHHHHHHHHHT----TSCSEEEEEESS
T ss_pred CcEEEEEcCCh-HhhhhhhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHc----CCCCeEEEEcCC
Confidence 59999999999 8988 89999999999999999985 399999999999999 999999999999
Q ss_pred chhhhhhhcCCCceEEEEeCCHHHHHHhHhhcCceEeEecc-ccC--CHHHH-HHHHHHHHcCCCCCCCCCCCCChhhhh
Q 021654 79 GVGVAIFANKNPGVFATTCLTPADALNTRSINNCNVLAVSG-MST--SKESA-VEILDTWLKTPFKAPCPASGFKPWEEN 154 (309)
Q Consensus 79 G~G~~iaaNK~~giraa~~~~~~~A~~~r~hN~aNvl~lg~-~~~--~~~~a-~~i~~~~l~~~f~~~~p~~~~~~~~~~ 154 (309)
|+||||+|||+||||||+|+|+++|+|+|+||||||||||+ |++ |+++| ++|+++||+|+|+||||+++.+|..+
T Consensus 78 GiG~sIAANKv~GIRAAlc~d~~sA~laR~HNnANVL~lG~~rvi~~g~ela~~~Iv~~fL~t~F~gG~~~~R~~~~~r- 156 (216)
T 2ppw_A 78 GVGAMLALNSFPGVVCGLAVDPTDAYLYSQINGGNALSIPYAKGFGWGAELTLKLMFERLFAEEMGGGYPRERVIPEQR- 156 (216)
T ss_dssp SHHHHHHHTTSTTCCEEECSSHHHHHHHHHHTCCSEEEEESSTTCCTTHHHHHHHHHHHHHSSCTTCCSSGGGHHHHHH-
T ss_pred cHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhcCceEEEeCCceecccCHHHHHHHHHHHHHcCCcCCCCChHHHhHHHH-
Confidence 99999999999999999999999999999999999999999 988 99999 69999999999999999999998876
Q ss_pred hhhhhhhcccccccccc
Q 021654 155 ISCFFDKSMTEMPLIGK 171 (309)
Q Consensus 155 I~~fl~~sl~el~~i~~ 171 (309)
..+.|+++..+..
T Consensus 157 ----n~~~l~~~~~~~~ 169 (216)
T 2ppw_A 157 ----NARILNEVKQITH 169 (216)
T ss_dssp ----HHHHHHHHHHHHS
T ss_pred ----hHHHHHHHHHHhh
Confidence 3555666665553
No 11
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=100.00 E-value=2.8e-54 Score=383.68 Aligned_cols=152 Identities=23% Similarity=0.300 Sum_probs=142.4
Q ss_pred CCcEEEEEeCcccHHHHH-----HHHHHHHhCCCcEEEecC--C-----CCcchhHHHHHHhhcCCCCCCCceEEEEecC
Q 021654 11 HPLKIIAGADSFGAELKD-----ALVSHLRSLNIDVEDLGT--S-----DYYSIGAEVGRRVSSSDSSDTTTRGLVACGT 78 (309)
Q Consensus 11 ~~mki~i~~D~~g~~lk~-----~l~~~l~~~g~ev~d~G~--~-----~y~~~a~~va~~v~~~~~~~~~~~gi~~Cgt 78 (309)
+.|||+|||||+ ++||+ .|++||+++||||+|+|+ + |||++|.+||++|.+ |+++|||+||||
T Consensus 2 ~~MkIaigsDha-~~lK~~~i~~~l~~~L~~~G~eV~D~G~~~~~~~~~dYpd~a~~vA~~V~~----g~~d~GIliCGT 76 (214)
T 3ono_A 2 NAMKIALMMENS-QAAKNAMVAGELNSVAGGLGHDVFNVGMTDENDHHLTYIHLGIMASILLNS----KAVDFVVTGCGT 76 (214)
T ss_dssp CCCEEEECCCGG-GGGGHHHHHHHHHHHHHHTTCEEEECSCSSTTSSCCCHHHHHHHHHHHHHT----TSCSEEEEEESS
T ss_pred CccEEEEECCCc-HHHHChhHHHHHHHHHHHCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHHc----CCCCEEEEEcCC
Confidence 569999999999 99999 999999999999999993 3 699999999999999 999999999999
Q ss_pred chhhhhhhcCCCceEEEEeCCHHHHHHhHhhcCceEeEeccc---cCCHHHHHH-HHHHHHcCCCCCCCCCCCCChhhhh
Q 021654 79 GVGVAIFANKNPGVFATTCLTPADALNTRSINNCNVLAVSGM---STSKESAVE-ILDTWLKTPFKAPCPASGFKPWEEN 154 (309)
Q Consensus 79 G~G~~iaaNK~~giraa~~~~~~~A~~~r~hN~aNvl~lg~~---~~~~~~a~~-i~~~~l~~~f~~~~p~~~~~~~~~~ 154 (309)
|+||||+|||+||||||+|+|+++|+|+|+||||||||||+| ++|+++|.+ |+++||+++|+||||.++.+|..+
T Consensus 77 GiG~siaANKv~GIRAAlc~d~~sA~laR~hNnANVL~lG~rr~~~ig~elA~~~Ivd~fL~t~F~gGr~~~R~~~~~r- 155 (214)
T 3ono_A 77 GQGALMSCNLHPGVVCGYCLEPSDAFLFNQINNGNAISLAFAKGFGWAGELNVRYIFEKAFTGKRGEGYPIERAAPQQA- 155 (214)
T ss_dssp SHHHHHHHHTSTTCCEEECSSHHHHHHHHHHTCCSEEEEESSTTCCTTHHHHHHHHHHHHSSSCCCCCSSGGGHHHHHH-
T ss_pred cHHHHHHHhcCCCeEEEEeCCHHHHHHHHHHcCCcEEEecCcccccccHHHHHHHHHHHHHcCCcCCCCChhHHHHHHH-
Confidence 999999999999999999999999999999999999999996 799999985 999999999999999999998888
Q ss_pred hhhhhhhccccccccccC
Q 021654 155 ISCFFDKSMTEMPLIGKN 172 (309)
Q Consensus 155 I~~fl~~sl~el~~i~~~ 172 (309)
..+.|+++.++++.
T Consensus 156 ----~~~il~~v~~~~~~ 169 (214)
T 3ono_A 156 ----NAAILNNVKAAVAK 169 (214)
T ss_dssp ----HHHHHHHHHHHHSC
T ss_pred ----HHHHHHHHHHHhcC
Confidence 57777777777653
No 12
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=2.7e-51 Score=366.68 Aligned_cols=152 Identities=20% Similarity=0.248 Sum_probs=138.9
Q ss_pred CCcEEEEEeCcccH--HHHHHHHHHHHhCCCcEEEecCC--------CCcchhHHHHHHhhcCCCCCCCceEEEEecCch
Q 021654 11 HPLKIIAGADSFGA--ELKDALVSHLRSLNIDVEDLGTS--------DYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGV 80 (309)
Q Consensus 11 ~~mki~i~~D~~g~--~lk~~l~~~l~~~g~ev~d~G~~--------~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~ 80 (309)
|+.+|++++|.+|. .||+.|++||+++||||+|+|++ |||++|.+||++|.+ |+++|||+|||||+
T Consensus 20 mkiali~~~sqa~kN~~lKe~i~~~L~~~G~eV~D~G~~s~~d~~svDYPd~a~~vA~~V~~----g~~d~GIliCGTGi 95 (231)
T 3c5y_A 20 MKIALIIENSQAAKNAVVHEALTTVAEPLGHKVFNYGMYTAEDKASLTYVMNGLLAGILLNS----GAADFVVTGCGTGM 95 (231)
T ss_dssp CEEEECCCGGGGGGHHHHHHHHHHHHGGGTCEEEECCCCSTTCSSCCCHHHHHHHHHHHHHH----TSCSEEEEEESSSH
T ss_pred ceEEEEecCCHhhhHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHc----CCCCeEEEEcCCcH
Confidence 44456678999999 89999999999999999999985 499999999999999 99999999999999
Q ss_pred hhhhhhcCCCceEEEEeCCHHHHHHhHhhcCceEeEecc-ccC--CHHHH-HHHHHHHHcCCCCCCCCCCCCChhhhhhh
Q 021654 81 GVAIFANKNPGVFATTCLTPADALNTRSINNCNVLAVSG-MST--SKESA-VEILDTWLKTPFKAPCPASGFKPWEENIS 156 (309)
Q Consensus 81 G~~iaaNK~~giraa~~~~~~~A~~~r~hN~aNvl~lg~-~~~--~~~~a-~~i~~~~l~~~f~~~~p~~~~~~~~~~I~ 156 (309)
||||+|||+||||||+|+|+++|+|+|+||||||||||+ |++ |+++| ++|+++||+|+|+||||+++.+|..+
T Consensus 96 G~sIAANKv~GIRAAlc~d~~sA~laR~HNnANVL~lGa~rvig~g~elA~~~Ivd~fL~teFeGGypq~R~~~~~r--- 172 (231)
T 3c5y_A 96 GSMLAANAMPGVFCGLVIDPTDAFLFGQINDGNAISMPYSKGFGWAAELNLQDVYRKLFDGERGLGYPRERAEIMRK--- 172 (231)
T ss_dssp HHHHHHHTSTTCCEEECCSHHHHHHHHHHTCCSEEEEESSTTCCTTHHHHHHHHHHHHHSSCCCCCSSGGGHHHHHH---
T ss_pred HHHHHHhcCCCeEEEEeCCHHHHHHHHHhcCccEEEECCceecccCHHHHHHHHHHHHHcCCcCCCCCchhhhHHHH---
Confidence 999999999999999999999999999999999999999 988 99999 69999999999999999999998877
Q ss_pred hhhhhcccccccccc
Q 021654 157 CFFDKSMTEMPLIGK 171 (309)
Q Consensus 157 ~fl~~sl~el~~i~~ 171 (309)
..+.|+++..+..
T Consensus 173 --n~~iL~~~k~~~~ 185 (231)
T 3c5y_A 173 --NRGILRELKDASC 185 (231)
T ss_dssp --HHHHHHHHHHHHB
T ss_pred --HHHHHHHHHHHhc
Confidence 4556666666653
No 13
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.47 E-value=3.1e-13 Score=105.14 Aligned_cols=83 Identities=22% Similarity=0.196 Sum_probs=70.1
Q ss_pred cCCceEEEeeeCCCe--EEEEEcCCCcCCCeecCCce-EEEEEecEEEEEEeeCC--eEEEecCCcEEEECCCCeEEEEE
Q 021654 201 IPGGSMKIIRESPTS--AIVRFKAGSVEPAHHHTFGH-DLVVLQGKKSVWNLTKG--ERFDLTVGDYLFTPAGDVHRVKY 275 (309)
Q Consensus 201 ~pgg~~~il~~~~~~--~~~~l~pG~~~p~H~H~~~e-~vyVlsG~l~v~i~~~~--~~~~L~pGD~v~IP~g~~H~~~n 275 (309)
+|++..+++...... ..++++||...++|.|+..+ ++||++|++++++ ++ +.+.|++||++|+|++++|+++|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~--~~g~~~~~l~~Gd~~~~p~~~~H~~~N 81 (97)
T 2fqp_A 4 RPGAIPTVQIDNERVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLET--PEGSVTSQLTRGVSYTRPEGVEHNVIN 81 (97)
T ss_dssp CCBCEEEEEEESSSEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEE--TTEEEEEEECTTCCEEECTTCEEEEEC
T ss_pred cCCCceeEEEcCCeEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEe--CCCCEEEEEcCCCEEEeCCCCcccCEe
Confidence 567777777665543 67889999999999999975 7999999999964 46 78999999999999999999999
Q ss_pred cCCceEEEEE
Q 021654 276 YEETEFFIKW 285 (309)
Q Consensus 276 ~gd~~~~i~~ 285 (309)
.+++++.+++
T Consensus 82 ~g~~~~~~l~ 91 (97)
T 2fqp_A 82 PSDTEFVFVE 91 (97)
T ss_dssp CSSSCEEEEE
T ss_pred CCCCcEEEEE
Confidence 9988876544
No 14
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.46 E-value=1e-12 Score=104.36 Aligned_cols=102 Identities=17% Similarity=0.151 Sum_probs=76.7
Q ss_pred eecCCCCCeeecCCceEEEeeeCCC--eEEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECC
Q 021654 190 VKNRELNPVEMIPGGSMKIIRESPT--SAIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPA 267 (309)
Q Consensus 190 ~~~~e~~~~~~~pgg~~~il~~~~~--~~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~ 267 (309)
++..+.......+|...+++..... ...+++.||...++|+|+..|++||++|++++. ++++.+.|++||++++|+
T Consensus 9 ~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~--~~~~~~~l~~Gd~~~ip~ 86 (116)
T 2pfw_A 9 SFGEQTEIEDIGGGLKRQMLGFNHELMAVKIWFDKGAEGYVHAHRHSQVSYVVEGEFHVN--VDGVIKVLTAGDSFFVPP 86 (116)
T ss_dssp ECTTTSCCEECSTTEEEEEEEEETTEEEEEEEECTTEEEEEECCSSEEEEEEEEECEEEE--ETTEEEEECTTCEEEECT
T ss_pred ecccCceeeeCCCCeEEEEEecCCceEEEEEEECCCCcCCcEECCcceEEEEEeeEEEEE--ECCEEEEeCCCCEEEECc
Confidence 3444444444455656666643333 266789999999999999999999999999995 469999999999999999
Q ss_pred CCeEEEEEcCCceEEEEEcCcccccc
Q 021654 268 GDVHRVKYYEETEFFIKWDGRWDMFF 293 (309)
Q Consensus 268 g~~H~~~n~gd~~~~i~~~~~~~i~~ 293 (309)
+++|+++|.++..++..+......|+
T Consensus 87 ~~~H~~~~~~~~~~l~v~~p~~~d~~ 112 (116)
T 2pfw_A 87 HVDHGAVCPTGGILIDTFSPAREDFV 112 (116)
T ss_dssp TCCEEEEESSCEEEEEEEESCCGGGC
T ss_pred CCceeeEeCCCcEEEEEECCchhhhh
Confidence 99999999987766555444333343
No 15
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.44 E-value=1e-12 Score=106.10 Aligned_cols=96 Identities=23% Similarity=0.296 Sum_probs=75.2
Q ss_pred EeecCCCCCeeecCCceEEEeeeCCCe-EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECC
Q 021654 189 LVKNRELNPVEMIPGGSMKIIRESPTS-AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPA 267 (309)
Q Consensus 189 v~~~~e~~~~~~~pgg~~~il~~~~~~-~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~ 267 (309)
+.+....+.....+|...+++...... ..+++.||...++|+|+..|++||++|+++++ ++++.+.|++||++++|+
T Consensus 16 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~--~~~~~~~l~~Gd~~~ip~ 93 (126)
T 4e2g_A 16 FYDLTEVRSFSPLPGFAMQAIQGKNLMLNWVRIEPNTEMPAHEHPHEQAGVMLEGTLELT--IGEETRVLRPGMAYTIPG 93 (126)
T ss_dssp EEEGGGSCCBCSSTTEEEEEEECSSCEEEEEEECTTCEEEEECCSSEEEEEEEEECEEEE--ETTEEEEECTTEEEEECT
T ss_pred hhhcccceecccCCCeEEEEEeCCCeEEEEEEECCCCcCCCccCCCceEEEEEEeEEEEE--ECCEEEEeCCCCEEEECC
Confidence 344444454545567777776554333 67899999999999999999999999999995 468999999999999999
Q ss_pred CCeEEEEEcCC-ceEEEEEc
Q 021654 268 GDVHRVKYYEE-TEFFIKWD 286 (309)
Q Consensus 268 g~~H~~~n~gd-~~~~i~~~ 286 (309)
|++|+++|.++ ..++..+.
T Consensus 94 ~~~H~~~~~~~~~~~l~v~~ 113 (126)
T 4e2g_A 94 GVRHRARTFEDGCLVLDIFS 113 (126)
T ss_dssp TCCEEEECCTTCEEEEEEEE
T ss_pred CCcEEeEECCCCEEEEEEEC
Confidence 99999999988 44443333
No 16
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.42 E-value=1.5e-12 Score=104.58 Aligned_cols=67 Identities=22% Similarity=0.321 Sum_probs=61.6
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEEE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~ 284 (309)
..++++||...++|+|+..|++||++|+++++ ++++++.|++||++++|++++|+++|.++..++++
T Consensus 39 ~~~~l~~G~~~~~H~H~~~e~~~Vl~G~~~~~--i~~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~ 105 (114)
T 3fjs_A 39 MRMVLPAGKQVGSHSVAGPSTIQCLEGEVEIG--VDGAQRRLHQGDLLYLGAGAAHDVNAITNTSLLVT 105 (114)
T ss_dssp EEEEECTTCEEEEECCSSCEEEEEEESCEEEE--ETTEEEEECTTEEEEECTTCCEEEEESSSEEEEEE
T ss_pred EEEEECCCCccCceeCCCcEEEEEEECEEEEE--ECCEEEEECCCCEEEECCCCcEEEEeCCCcEEEEE
Confidence 67899999999999999999999999999995 46999999999999999999999999998887643
No 17
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.33 E-value=1.9e-11 Score=97.55 Aligned_cols=67 Identities=10% Similarity=0.173 Sum_probs=59.4
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEE-EecCCcEEEECCCCeEEEEEcCCceEEEE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERF-DLTVGDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~-~L~pGD~v~IP~g~~H~~~n~gd~~~~i~ 284 (309)
..+++.||...++|+|+..|++||++|++++. .+++.+ .|++||++++|+|++|+++|.++.++.+.
T Consensus 30 ~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~--i~~~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l 97 (117)
T 2b8m_A 30 NHIVLPRGEQMPKHYSNSYVHLIIIKGEMTLT--LEDQEPHNYKEGNIVYVPFNVKMLIQNINSDILEFF 97 (117)
T ss_dssp EEEEEETTCBCCCEECSSCEEEEEEESEEEEE--ETTSCCEEEETTCEEEECTTCEEEEECCSSSEEEEE
T ss_pred EEEEECCCCcCCCEeCCCcEEEEEEeCEEEEE--ECCEEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEE
Confidence 56788999999999999999999999999995 468888 99999999999999999999988765433
No 18
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.33 E-value=3.4e-12 Score=104.96 Aligned_cols=70 Identities=19% Similarity=0.313 Sum_probs=61.2
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEEEE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~ 285 (309)
..+++.||...++|+|+..|++||++|+++++...+++++.+++||++++|+|++|+++|.++.++.+++
T Consensus 42 ~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~ 111 (145)
T 3ht1_A 42 TEFEVSPNGSTPPHFHEWEHEIYVLEGSMGLVLPDQGRTEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLV 111 (145)
T ss_dssp EEEEEEEEEECCCEECSSCEEEEEEEECEEEEEGGGTEEEEECTTCEEEECTTCCBEEECCTTCCEEEEE
T ss_pred EEEEECCCCcCCCccCCCceEEEEEEeEEEEEEeECCEEEEECCCCEEEECCCCeEEeEcCCCCCEEEEE
Confidence 5678899999999999999999999999999511679999999999999999999999999877655443
No 19
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.33 E-value=1.5e-11 Score=97.38 Aligned_cols=78 Identities=14% Similarity=0.192 Sum_probs=64.3
Q ss_pred CceEEEeeeCCCe--EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCce
Q 021654 203 GGSMKIIRESPTS--AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETE 280 (309)
Q Consensus 203 gg~~~il~~~~~~--~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~ 280 (309)
|...+.+...... ..+++.||...++|+|+..|++||++|+++++ .+++.+.+++||++++|+|++|+++|.++..
T Consensus 28 ~~~~~~l~~~~~~~~~~~~~~~g~~~~~H~H~~~e~~~vl~G~~~~~--~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~ 105 (115)
T 1yhf_A 28 QMLSRTLVQRQDLGITVFSLDKGQEIGRHSSPGDAMVTILSGLAEIT--IDQETYRVAEGQTIVMPAGIPHALYAVEAFQ 105 (115)
T ss_dssp CEEEEEEEEETTEEEEEEEECTTCEEEEECCSSEEEEEEEESEEEEE--ETTEEEEEETTCEEEECTTSCEEEEESSCEE
T ss_pred CeEEEEEEeCCceEEEEEEECCCCccCCEECCCcEEEEEEeCEEEEE--ECCEEEEECCCCEEEECCCCCEEEEECCCce
Confidence 3444444433332 56789999999999999999999999999995 4689999999999999999999999998766
Q ss_pred EE
Q 021654 281 FF 282 (309)
Q Consensus 281 ~~ 282 (309)
++
T Consensus 106 ~~ 107 (115)
T 1yhf_A 106 ML 107 (115)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 20
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.31 E-value=1.3e-11 Score=99.56 Aligned_cols=68 Identities=19% Similarity=0.278 Sum_probs=58.4
Q ss_pred EEEEEcCCCcCCCeecCC-ceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEEE
Q 021654 216 AIVRFKAGSVEPAHHHTF-GHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~-~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~ 284 (309)
..+++.||...++|+|+. .|.+||++|++++++ .+++++.|++||++++|+|++|++.|.++.++.++
T Consensus 42 ~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~-~~~~~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l 110 (125)
T 3h8u_A 42 VVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQ-GNGIVTHLKAGDIAIAKPGQVHGAMNSGPEPFIFV 110 (125)
T ss_dssp EEEEECTTCEECCC-CTTCEEEEEEEECEEEEEC-STTCEEEEETTEEEEECTTCCCEEEECSSSCEEEE
T ss_pred EEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEE-CCCeEEEeCCCCEEEECCCCEEEeEeCCCCCEEEE
Confidence 568899999999999996 566889999999953 16899999999999999999999999988776544
No 21
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.29 E-value=2.4e-11 Score=93.45 Aligned_cols=68 Identities=22% Similarity=0.247 Sum_probs=59.7
Q ss_pred EEEEEcCCCcCCCeecCC-ceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEEEE
Q 021654 216 AIVRFKAGSVEPAHHHTF-GHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~-~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~ 285 (309)
..+++.||...++|+|+. .|++||++|+++++ .+++.+.+++||++++|+|++|+++|.++.++.+++
T Consensus 31 ~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~--~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~ 99 (105)
T 1v70_A 31 DLYALLPGQAQKVHVHEGSDKVYYALEGEVVVR--VGEEEALLAPGMAAFAPAGAPHGVRNESASPALLLV 99 (105)
T ss_dssp EEEEECTTCEEEEECCSSCEEEEEEEESCEEEE--ETTEEEEECTTCEEEECTTSCEEEECCSSSCEEEEE
T ss_pred EEEEECCCCcCCccCCCCCcEEEEEEeCEEEEE--ECCEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 567899999999999996 56799999999995 468999999999999999999999999877765544
No 22
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.29 E-value=3.3e-11 Score=103.41 Aligned_cols=69 Identities=14% Similarity=0.146 Sum_probs=61.6
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcC-CceEEEEEc
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYE-ETEFFIKWD 286 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~g-d~~~~i~~~ 286 (309)
..+++.||...++|+|+..|++||++|+++++ ++++++.|++||++++|++++|+++|.+ +.++.+++.
T Consensus 59 ~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~--i~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i 128 (167)
T 3ibm_A 59 RYFEVEPGGYTTLERHEHTHVVMVVRGHAEVV--LDDRVEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCI 128 (167)
T ss_dssp EEEEECTTCBCCCBBCSSCEEEEEEESEEEEE--ETTEEEEECTTCEEEECTTCCEEEEEESSSCCEEEEEE
T ss_pred EEEEECCCCCCCCccCCCcEEEEEEeCEEEEE--ECCEEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEE
Confidence 56789999999999999999999999999995 5699999999999999999999999998 777654443
No 23
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.28 E-value=1.2e-11 Score=105.16 Aligned_cols=69 Identities=14% Similarity=0.201 Sum_probs=61.6
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEEEEc
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWD 286 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~~ 286 (309)
..+++.||...++|+|+..|++||++|+++++ ++++++.|++||++++|++++|+++|.+++++.+++.
T Consensus 47 ~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~v~--v~g~~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i 115 (156)
T 3kgz_A 47 RYFEVDEGGYSTLERHAHVHAVMIHRGHGQCL--VGETISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCV 115 (156)
T ss_dssp EEEEEEEEEECCCBBCSSCEEEEEEEEEEEEE--ETTEEEEEETTCEEEECTTCCEEEECCSSSCEEEEEE
T ss_pred EEEEECCCCccCceeCCCcEEEEEEeCEEEEE--ECCEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 46788999999999999999999999999995 5699999999999999999999999999877654443
No 24
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.28 E-value=5.1e-11 Score=96.22 Aligned_cols=75 Identities=21% Similarity=0.393 Sum_probs=64.4
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEEEEcCccccccch
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWDGRWDMFFDE 295 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~~~~~~i~~~e 295 (309)
...++.||...++|+|+..|++||++|+++++ ++++.+.+++||++++|+|++|++.|.++.++.+ +.+++++
T Consensus 37 ~~~~~~pg~~~~~H~H~~~Ei~~v~~G~~~~~--i~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~-----~~i~f~~ 109 (128)
T 4i4a_A 37 AWCIVRPETKSFRHSHNEYELFIVIQGNAIIR--INDEDFPVTKGDLIIIPLDSEHHVINNNQEDFHF-----YTIWWDK 109 (128)
T ss_dssp EEEEECTTEECCCBCCSSEEEEEEEESEEEEE--ETTEEEEEETTCEEEECTTCCEEEEECSSSCEEE-----EEEEECH
T ss_pred EEEEECCCCccCCEecCCeEEEEEEeCEEEEE--ECCEEEEECCCcEEEECCCCcEEeEeCCCCCEEE-----EEEEECH
Confidence 56788999999999999999999999999995 4699999999999999999999999988776543 2456666
Q ss_pred hH
Q 021654 296 DL 297 (309)
Q Consensus 296 ~~ 297 (309)
++
T Consensus 110 ~~ 111 (128)
T 4i4a_A 110 ES 111 (128)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 25
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=99.27 E-value=9.8e-12 Score=104.44 Aligned_cols=93 Identities=25% Similarity=0.318 Sum_probs=77.9
Q ss_pred cCCceEEEeeeCCC----eEEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeE--EEecCCcEEEECCCCeEE-E
Q 021654 201 IPGGSMKIIRESPT----SAIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGER--FDLTVGDYLFTPAGDVHR-V 273 (309)
Q Consensus 201 ~pgg~~~il~~~~~----~~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~--~~L~pGD~v~IP~g~~H~-~ 273 (309)
.+|.+.+++..++. ..+++++||...|.|+|+..|++|||+|++++ ..++.. +.+++||++++|+|..|. .
T Consensus 28 ~~Gv~~~~L~~~~~~g~~~~~~~~~pG~~~p~H~H~~~ee~~VL~G~~~~--~~g~~~~~~~~~~Gd~~~~p~g~~H~p~ 105 (145)
T 2o1q_A 28 TGGIRWKLLHVSPEMGSWTAIFDCPAGSSFAAHVHVGPGEYFLTKGKMDV--RGGKAAGGDTAIAPGYGYESANARHDKT 105 (145)
T ss_dssp ESCCEEEEEEEETTTTEEEEEEEECTTEEECCEEESSCEEEEEEEEEEEE--TTCGGGTSEEEESSEEEEECTTCEESCC
T ss_pred CCCcEEEEeeECCCcccEEEEEEECCCCCCCccCCCCCEEEEEEEeEEEE--cCCCEecceEeCCCEEEEECcCCccCCe
Confidence 57777887765543 37899999999999999999999999999998 444555 899999999999999999 7
Q ss_pred EEcCCceEEEEEcCccccccchh
Q 021654 274 KYYEETEFFIKWDGRWDMFFDED 296 (309)
Q Consensus 274 ~n~gd~~~~i~~~~~~~i~~~e~ 296 (309)
.+.+++.+++.+.+.+ .|++++
T Consensus 106 ~~~e~~~~l~~~~gp~-~f~~~~ 127 (145)
T 2o1q_A 106 EFPVASEFYMSFLGPL-TFVKPD 127 (145)
T ss_dssp EEEEEEEEEEEEESCE-EEECTT
T ss_pred ECCCCeEEEEEECCcc-eecCCC
Confidence 7677888899999998 566654
No 26
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.27 E-value=1.5e-11 Score=105.81 Aligned_cols=69 Identities=12% Similarity=0.145 Sum_probs=61.7
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEEEEc
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWD 286 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~~ 286 (309)
.++++.||...++|+|+..|++||++|+++++ ++++++.|++||++++|++++|+++|.++.++.+.+.
T Consensus 56 ~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~--v~g~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i 124 (166)
T 3jzv_A 56 RYFEVGPGGHSTLERHQHAHGVMILKGRGHAM--VGRAVSAVAPYDLVTIPGWSWHQFRAPADEALGFLCM 124 (166)
T ss_dssp EEEEEEEEEECCCBBCSSCEEEEEEEECEEEE--ETTEEEEECTTCEEEECTTCCEEEECCTTSCEEEEEE
T ss_pred EEEEECCCCccCceeCCCcEEEEEEeCEEEEE--ECCEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 56789999999999999999999999999995 5699999999999999999999999999877654443
No 27
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.26 E-value=4.6e-11 Score=103.82 Aligned_cols=141 Identities=13% Similarity=0.032 Sum_probs=92.1
Q ss_pred HHHHHHcCCCCCCCCCCCCChhhhhhhhhhhhccccccccccCCCCCCCCCCCccceeEEeecCCCCC---e-eecCCce
Q 021654 130 ILDTWLKTPFKAPCPASGFKPWEENISCFFDKSMTEMPLIGKNDKLDSDSSSSTCSICCLVKNRELNP---V-EMIPGGS 205 (309)
Q Consensus 130 i~~~~l~~~f~~~~p~~~~~~~~~~I~~fl~~sl~el~~i~~~~~~~~~~~~~~~~~~~v~~~~e~~~---~-~~~pgg~ 205 (309)
.+..|.+..-. .-.......|+++++.++..|..-..++. ...+ .+++..+... . ....+..
T Consensus 39 ~ls~~e~g~~~-----~p~~~~l~~ia~~l~~~~~~l~~~~~~~~--~~~~-------~~~~~~e~~~~~~~~~~~~~~~ 104 (198)
T 2bnm_A 39 TVAAWENGEGG-----ELTLTQLGRIAHVLGTSIGALTPPAGNDL--DDGV-------IIQMPDERPILKGVRDNVDYYV 104 (198)
T ss_dssp HHHHHHTTTCT-----TCBHHHHHHHHHHTTSCTGGGSCCCCCCC--BTTB-------CCCCGGGCCEECCSTTCSTTEE
T ss_pred HHHHHHcCCCC-----CCCHHHHHHHHHHhCCCHHHEEccCCCCc--ccCc-------eEEeecccccccccccCCCceE
Confidence 36666654331 11234567789999998888765332100 0111 2334333322 1 1122333
Q ss_pred EEEeeeCC-C----eEEEEEcCCCcCC---CeecCCceEEEEEecEEEEEEeeCC----eEEEecCCcEEEECCCCeEEE
Q 021654 206 MKIIRESP-T----SAIVRFKAGSVEP---AHHHTFGHDLVVLQGKKSVWNLTKG----ERFDLTVGDYLFTPAGDVHRV 273 (309)
Q Consensus 206 ~~il~~~~-~----~~~~~l~pG~~~p---~H~H~~~e~vyVlsG~l~v~i~~~~----~~~~L~pGD~v~IP~g~~H~~ 273 (309)
...+.... . ...++++||...+ +|+|+..|++||++|++++++ ++ +.+.|++||++++|++++|++
T Consensus 105 ~~~l~~~~~~~~~~~~~~~~~pg~~~~~~~~h~h~~~E~~~Vl~G~~~~~~--~~~~~~~~~~l~~GD~~~~~~~~~H~~ 182 (198)
T 2bnm_A 105 YNCLVRTKRAPSLVPLVVDVLTDNPDDAKFNSGHAGNEFLFVLEGEIHMKW--GDKENPKEALLPTGASMFVEEHVPHAF 182 (198)
T ss_dssp EEECCCCTTSTTCEEEEEEECCCCGGGCCCCCCCSSCEEEEEEESCEEEEE--SCTTSCEEEEECTTCEEEECTTCCEEE
T ss_pred EEeeccCCCCCcceEEEEEEcCCCCCcccccccCCCeEEEEEEeeeEEEEE--CCcCCcccEEECCCCEEEeCCCCceEE
Confidence 44443321 1 2667899998876 799999999999999999965 57 999999999999999999999
Q ss_pred EEc-CCceEEEEEc
Q 021654 274 KYY-EETEFFIKWD 286 (309)
Q Consensus 274 ~n~-gd~~~~i~~~ 286 (309)
+|. ++.++.++|.
T Consensus 183 ~n~~~~~~~~~l~v 196 (198)
T 2bnm_A 183 TAAKGTGSAKLIAV 196 (198)
T ss_dssp EESTTSCCEEEEEE
T ss_pred EecCCCCCeEEEEE
Confidence 999 8877765543
No 28
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.26 E-value=2.3e-11 Score=95.31 Aligned_cols=69 Identities=19% Similarity=0.214 Sum_probs=60.1
Q ss_pred EEEEEcCCCcCCCe--ecC-CceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEEEEc
Q 021654 216 AIVRFKAGSVEPAH--HHT-FGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWD 286 (309)
Q Consensus 216 ~~~~l~pG~~~p~H--~H~-~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~~ 286 (309)
..+++.||...++| +|+ ..|++||++|+++++ ++++.+.|++||++++|++++|+++|.++.++.+.+.
T Consensus 24 ~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~--~~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v 95 (113)
T 2gu9_A 24 AEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAI--VDGHTQALQAGSLIAIERGQAHEIRNTGDTPLKTVNF 95 (113)
T ss_dssp EEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEE--ETTEEEEECTTEEEEECTTCCEEEECCSSSCEEEEEE
T ss_pred EEEEECCCCccCCcccccCCCcEEEEEEeCEEEEE--ECCEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEE
Confidence 55688999998888 999 788899999999995 4699999999999999999999999998776655444
No 29
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.25 E-value=4.6e-11 Score=101.21 Aligned_cols=67 Identities=18% Similarity=0.294 Sum_probs=59.5
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCC---------eEEEecCCcEEEECCCCeEEEEEcC-CceEEEE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKG---------ERFDLTVGDYLFTPAGDVHRVKYYE-ETEFFIK 284 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~---------~~~~L~pGD~v~IP~g~~H~~~n~g-d~~~~i~ 284 (309)
..++++||...++|+|+..|++||++|++++++ ++ +++.|++||++++|+|++|+++|.+ +.++.++
T Consensus 44 ~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~--~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l 120 (163)
T 1lr5_A 44 WLQTISPGQRTPIHRHSCEEVFTVLKGKGTLLM--GSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVL 120 (163)
T ss_dssp EEEEECTTCBCCEEEESSCEEEEEEECCEEEEE--CCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEEEE
T ss_pred EEEEECCCCcCCCeECCCCeEEEEEeCEEEEEE--CCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEEEE
Confidence 567899999999999999999999999999965 46 8999999999999999999999998 6665443
No 30
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.24 E-value=5.2e-11 Score=97.84 Aligned_cols=97 Identities=21% Similarity=0.330 Sum_probs=74.0
Q ss_pred EEeecCCCCCeeec-----CCce-EE-EeeeC--CC-e---EEEEEcCCCcCCCeecC-CceEEEEEecEEEEEEeeCCe
Q 021654 188 CLVKNRELNPVEMI-----PGGS-MK-IIRES--PT-S---AIVRFKAGSVEPAHHHT-FGHDLVVLQGKKSVWNLTKGE 253 (309)
Q Consensus 188 ~v~~~~e~~~~~~~-----pgg~-~~-il~~~--~~-~---~~~~l~pG~~~p~H~H~-~~e~vyVlsG~l~v~i~~~~~ 253 (309)
.|+|+.+....... .|+. ++ ++... +. . ..++++||...++|+|+ ..|++||++|+++++ ++++
T Consensus 19 ~v~r~~~~~~~~~~~~~~~~g~~~~~~ll~p~~~~~~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~--i~~~ 96 (133)
T 1o4t_A 19 MVVRSSEITPERISNMRGGKGEVEMAHLLSKEAMHNKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFH--DNGK 96 (133)
T ss_dssp CEEEGGGSCCEEEESGGGCSSEEEEEECSCTTTTTTSEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEE--ETTE
T ss_pred EEEEhhhCCEEEecCccCCCCeEEEEEccChhhCCCceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEE--ECCE
Confidence 47888887766543 2222 23 33322 11 1 46789999999999998 578899999999995 4699
Q ss_pred EEEecCCcEEEECCCCeEEEEEcCCceEEEEEc
Q 021654 254 RFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWD 286 (309)
Q Consensus 254 ~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~~ 286 (309)
++.|++||++++|++++|++.|.++.++.++|.
T Consensus 97 ~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l~v 129 (133)
T 1o4t_A 97 DVPIKAGDVCFTDSGESHSIENTGNTDLEFLAV 129 (133)
T ss_dssp EEEEETTEEEEECTTCEEEEECCSSSCEEEEEE
T ss_pred EEEeCCCcEEEECCCCcEEeEECCCCCEEEEEE
Confidence 999999999999999999999999887765543
No 31
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.24 E-value=3e-11 Score=109.31 Aligned_cols=85 Identities=12% Similarity=-0.007 Sum_probs=69.9
Q ss_pred cCCceEEEeeeCCCe-EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEE-ECCCCeEEEEEcCC
Q 021654 201 IPGGSMKIIRESPTS-AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLF-TPAGDVHRVKYYEE 278 (309)
Q Consensus 201 ~pgg~~~il~~~~~~-~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~-IP~g~~H~~~n~gd 278 (309)
.+|...+++...... .+++++||...++|+|+..|++||++|+++++ ++++++.|+|||++| +|+|++|+++|.++
T Consensus 21 ~~Gv~~~~l~~~~~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~--~~~~~~~l~~Gd~i~~ip~~~~H~~~n~~~ 98 (243)
T 3h7j_A 21 ENGVRQYSTVRGDTEVLMSYVPPHTNVEPHQHKEVQIGMVVSGELMMT--VGDVTRKMTALESAYIAPPHVPHGARNDTD 98 (243)
T ss_dssp TTSCEEEEEEETTEEEEEEEECTTEEEEEECCSSEEEEEEEESEEEEE--ETTEEEEEETTTCEEEECTTCCEEEEECSS
T ss_pred CCCeEEEEEECCCCEEEEEEECCCCccCCEECCCcEEEEEEEeEEEEE--ECCEEEEECCCCEEEEcCCCCcEeeEeCCC
Confidence 345555555443332 56679999999999999999999999999995 469999999999997 99999999999999
Q ss_pred ceEEEEEcC
Q 021654 279 TEFFIKWDG 287 (309)
Q Consensus 279 ~~~~i~~~~ 287 (309)
.+++++++-
T Consensus 99 ~~~~~l~i~ 107 (243)
T 3h7j_A 99 QEVIAIDIK 107 (243)
T ss_dssp SCEEEEEEE
T ss_pred CcEEEEEEe
Confidence 888766653
No 32
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.23 E-value=1.3e-10 Score=90.83 Aligned_cols=67 Identities=25% Similarity=0.414 Sum_probs=58.7
Q ss_pred EEEEEcCCCcCCCeecCC-ceE-EEEEecEEEEEEeeC-CeEEEecCCcEEEECCCCeEEEEEcCCceEEEE
Q 021654 216 AIVRFKAGSVEPAHHHTF-GHD-LVVLQGKKSVWNLTK-GERFDLTVGDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~-~e~-vyVlsG~l~v~i~~~-~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~ 284 (309)
..+++.||...++|+|+. .|. +||++|++++. .+ ++.+.|++||++++|+|++|+++|.++..+++.
T Consensus 36 ~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~--~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l~~ 105 (110)
T 2q30_A 36 VSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFV--GDGDAVIPAPRGAVLVAPISTPHGVRAVTDMKVLVT 105 (110)
T ss_dssp EEEEECTTCEEEEECCSSSCEEEEEEEESCEEEE--CGGGCEEEECTTEEEEEETTSCEEEEESSSEEEEEE
T ss_pred EEEEECCCCcCCcccCCCCccEEEEEEeCEEEEE--eCCCEEEEECCCCEEEeCCCCcEEEEEcCCcEEEEE
Confidence 567889999999999996 687 79999999995 45 689999999999999999999999988766543
No 33
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.22 E-value=5.3e-11 Score=94.48 Aligned_cols=65 Identities=18% Similarity=0.281 Sum_probs=57.5
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~ 282 (309)
.++.+.||...+.|+|+..|++||++|+++++ .+++.+.|++||++++|++++|+++|.++..++
T Consensus 41 ~~~~~~~g~~~~~H~h~~~e~~~vl~G~~~~~--i~~~~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~ 105 (114)
T 2ozj_A 41 SLFSFADGESVSEEEYFGDTLYLILQGEAVIT--FDDQKIDLVPEDVLMVPAHKIHAIAGKGRFKML 105 (114)
T ss_dssp EEEEEETTSSCCCBCCSSCEEEEEEEEEEEEE--ETTEEEEECTTCEEEECTTCCBEEEEEEEEEEE
T ss_pred EEEEECCCCccccEECCCCeEEEEEeCEEEEE--ECCEEEEecCCCEEEECCCCcEEEEeCCCcEEE
Confidence 45678899999999999999999999999995 469999999999999999999999997654443
No 34
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.21 E-value=5e-11 Score=100.78 Aligned_cols=70 Identities=17% Similarity=0.305 Sum_probs=61.1
Q ss_pred EEEEEcCCC-cCCCeec-CCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCC-CeEEEEEcCCceEEEEEcC
Q 021654 216 AIVRFKAGS-VEPAHHH-TFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAG-DVHRVKYYEETEFFIKWDG 287 (309)
Q Consensus 216 ~~~~l~pG~-~~p~H~H-~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g-~~H~~~n~gd~~~~i~~~~ 287 (309)
..++++||. ..++|+| ...|++||++|+++++ ++++++.|++||++++|++ ++|++.|.+++++.+++..
T Consensus 49 ~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~--~~~~~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l~v~ 121 (162)
T 3l2h_A 49 HLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLT--MENDQYPIAPGDFVGFPCHAAAHSISNDGTETLVCLVIG 121 (162)
T ss_dssp EEEEECTTCBSSSSBEESSCCEEEEEEESCEEEE--ETTEEEEECTTCEEEECTTSCCEEEECCSSSCEEEEEEE
T ss_pred EEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEE--ECCEEEEeCCCCEEEECCCCceEEeEeCCCCCEEEEEEE
Confidence 567899999 5899999 6788899999999995 4699999999999999998 9999999998877655544
No 35
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=99.20 E-value=6.8e-11 Score=100.46 Aligned_cols=106 Identities=25% Similarity=0.326 Sum_probs=87.2
Q ss_pred EEeecCCCCCeee-----cCCceEEEeeeCCCe----EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCC--eEEE
Q 021654 188 CLVKNRELNPVEM-----IPGGSMKIIRESPTS----AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKG--ERFD 256 (309)
Q Consensus 188 ~v~~~~e~~~~~~-----~pgg~~~il~~~~~~----~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~--~~~~ 256 (309)
.++...+...+.. .+|-+++.|+.++.. .+++++||..+|.|+|+..++++||+|++.. ..++ ..+.
T Consensus 12 ~~v~~d~~~W~p~P~~l~~~Gv~~k~L~~~~e~g~~t~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~--~~Gd~~~~~~ 89 (153)
T 3bal_A 12 EYVKISDNNYVPFPEAFSDGGITWQLLHSSPETSSWTAIFNCPAGSSFASHIHAGPGEYFLTKGKMEV--RGGEQEGGST 89 (153)
T ss_dssp EEEECCGGGCEECCGGGEESCCEEEEEEEETTTTEEEEEEEECTTEEECCEEESSCEEEEEEESEEEE--TTCGGGTSEE
T ss_pred eEEccccCceecCCCccCCCCeEEEEEEECCccceEEEEEEeCCCCCccCccCCCCEEEEEEEEEEEe--cCccccCccc
Confidence 4667777777766 678889988777653 7899999999999999999999999999998 4333 3488
Q ss_pred ecCCcEEEECCCCeEE-EEEcCCceEEEEEcCccccccchh
Q 021654 257 LTVGDYLFTPAGDVHR-VKYYEETEFFIKWDGRWDMFFDED 296 (309)
Q Consensus 257 L~pGD~v~IP~g~~H~-~~n~gd~~~~i~~~~~~~i~~~e~ 296 (309)
+.+|++++.|+|..|. +...+++++++...|.+ .|++++
T Consensus 90 ~~aGsYv~ePpGs~H~p~~~~~~~~~~~~~~Gp~-~y~d~~ 129 (153)
T 3bal_A 90 AYAPSYGFESSGALHGKTFFPVESQFYMTFLGPL-NFIDDN 129 (153)
T ss_dssp EESSEEEEECTTCEESCCEESSCEEEEEEEESCE-EEECTT
T ss_pred cCCCeEEEcCCCCcccceeCCCCeEEEEEEECCe-EEECCC
Confidence 8999999999999998 45566788888888887 688775
No 36
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.19 E-value=5.5e-11 Score=96.61 Aligned_cols=67 Identities=21% Similarity=0.417 Sum_probs=59.9
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEEE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~ 284 (309)
..++++||...++|+|+..|++||++|+++++ .+++++.|++||++++|++++|++.|.+++++.+.
T Consensus 51 ~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~--i~~~~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l 117 (126)
T 1vj2_A 51 RLFTVEPGGLIDRHSHPWEHEIFVLKGKLTVL--KEQGEETVEEGFYIFVEPNEIHGFRNDTDSEVEFL 117 (126)
T ss_dssp EEEEEEEEEEEEEECCSSCEEEEEEESEEEEE--CSSCEEEEETTEEEEECTTCCEEEECCSSSCEEEE
T ss_pred EEEEECCCCcCCceeCCCcEEEEEEEeEEEEE--ECCEEEEECCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 56788999999999999999999999999995 56899999999999999999999999987666543
No 37
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=99.17 E-value=1.9e-10 Score=98.06 Aligned_cols=108 Identities=17% Similarity=0.174 Sum_probs=79.8
Q ss_pred ceeEEeecCCCCCeeecCCceEEEeeeCCCe--EEEEEcCCCcCCCeecCC-ceEEEEEe--cEEEEEEeeCCeEEEecC
Q 021654 185 SICCLVKNRELNPVEMIPGGSMKIIRESPTS--AIVRFKAGSVEPAHHHTF-GHDLVVLQ--GKKSVWNLTKGERFDLTV 259 (309)
Q Consensus 185 ~~~~v~~~~e~~~~~~~pgg~~~il~~~~~~--~~~~l~pG~~~p~H~H~~-~e~vyVls--G~l~v~i~~~~~~~~L~p 259 (309)
....++.-.+..+...++|.+++++...... .+..+.++...++|+|+. .|++|||+ |++++++ +++.+.|++
T Consensus 15 ~~~~iv~~~ei~~~~~~~G~srR~l~~~~~fp~sv~~v~~g~~~~~H~H~~~~E~~yVLe~~G~g~v~i--dge~~~l~~ 92 (157)
T 4h7l_A 15 AMPQMISLSEIEAVACPCGWAQRAFGHDAGTSVSVHYTQITKAARTHYHREHQEIYVVLDHAAHATIEL--NGQSYPLTK 92 (157)
T ss_dssp TSCEEEETTTSCCEEETTEEEEEESCGGGCCSCEEEEEEECSCCCCBBCSSCEEEEEEEEECTTCEEEE--TTEEEECCT
T ss_pred cCceEEEhhhCCCccCCCCeeeEEeEcCCCCcEEEEEEeCCCCccceECCCCcEEEEEEecCcEEEEEE--CCEEEEeCC
Confidence 4457888888888888888888877655432 344456677789999975 56799999 9999954 699999999
Q ss_pred CcEEEECCCCeEEEEEcCCceEEEEEcCcc---ccccchh
Q 021654 260 GDYLFTPAGDVHRVKYYEETEFFIKWDGRW---DMFFDED 296 (309)
Q Consensus 260 GD~v~IP~g~~H~~~n~gd~~~~i~~~~~~---~i~~~e~ 296 (309)
||+++||+|++|++. ++..++......+ +-|++|+
T Consensus 93 GD~v~IPpg~~H~i~--g~l~~L~I~~Pp~~~eD~~f~e~ 130 (157)
T 4h7l_A 93 LLAISIPPLVRHRIV--GEATIINIVSPPFDPADEWFDSS 130 (157)
T ss_dssp TEEEEECTTCCEEEE--SCEEEEEEEESSCCTTCCBC---
T ss_pred CCEEEECCCCeEeeE--CCEEEEEEECCCCCCCcceEccc
Confidence 999999999999997 4555555555543 3555553
No 38
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.17 E-value=1.2e-10 Score=97.37 Aligned_cols=68 Identities=16% Similarity=0.104 Sum_probs=58.6
Q ss_pred EEEEEcCCCcCCCeecCCc-eEEEEEecEEEEEEeeCCeE------EEecCCcEEEECCCCeEEEEEcCCceEEEEE
Q 021654 216 AIVRFKAGSVEPAHHHTFG-HDLVVLQGKKSVWNLTKGER------FDLTVGDYLFTPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~-e~vyVlsG~l~v~i~~~~~~------~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~ 285 (309)
..+++.||...++|+|+.. |++||++|++++++. ++. +.|++||++++|+|++|+++|.++.++.+++
T Consensus 46 ~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~--~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~ 120 (148)
T 2oa2_A 46 TLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMG--HRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYS 120 (148)
T ss_dssp EEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEE--SBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEE
T ss_pred EEEEECCCCccCceECCCCcEEEEEEeCEEEEEEC--CccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEE
Confidence 5678999999999999865 779999999999654 666 9999999999999999999999877664433
No 39
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.17 E-value=5.1e-11 Score=103.18 Aligned_cols=69 Identities=17% Similarity=0.195 Sum_probs=61.2
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEEEEc
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWD 286 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~~ 286 (309)
.+++++||...++|.|...|++|||+|++++++. +++++.|++||++ +|++++|+++|.+++++.++|.
T Consensus 82 ~~v~l~PG~~~~~H~H~~eE~~~VLeGel~l~ld-~ge~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V 150 (172)
T 3es1_A 82 RVVDMLPGKESPMHRTNSIDYGIVLEGEIELELD-DGAKRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFI 150 (172)
T ss_dssp EEEEECTTCBCCCBCCSEEEEEEEEESCEEEECG-GGCEEEECTTCEE-EECSCCBEEECCSSSCEEEEEE
T ss_pred EEEEECCCCCCCCeecCceEEEEEEeCEEEEEEC-CCeEEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEE
Confidence 5678999999999999999999999999999642 2689999999999 9999999999999888776664
No 40
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.15 E-value=1.5e-10 Score=98.79 Aligned_cols=70 Identities=20% Similarity=0.235 Sum_probs=61.1
Q ss_pred EEEEEcCCCcC-CCeecCC-ceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCC--CeEEEEEcCCceEEEEEcC
Q 021654 216 AIVRFKAGSVE-PAHHHTF-GHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAG--DVHRVKYYEETEFFIKWDG 287 (309)
Q Consensus 216 ~~~~l~pG~~~-p~H~H~~-~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g--~~H~~~n~gd~~~~i~~~~ 287 (309)
.+++++||... ++|+|+. .|++||++|+++++ ++++++.|++||++++|++ ++|+++|.++.++.+++..
T Consensus 46 ~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~--~~~~~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~l~v~ 119 (163)
T 3i7d_A 46 NLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLV--DDQGEHPMVPGDCAAFPAGDPNGHQFVNRTDAPATFLVVG 119 (163)
T ss_dssp EEEEECTTCBSSSSEEESSCCEEEEEEESCEEEE--ETTEEEEECTTCEEEECTTCCCCBEEECCSSSCEEEEEEE
T ss_pred EEEEECCCCcCCCCccCCCCcEEEEEEECEEEEE--ECCEEEEeCCCCEEEECCCCCcceEEEECCCCCEEEEEEE
Confidence 67899999966 8999998 58899999999995 4699999999999999999 9999999998777655543
No 41
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=99.15 E-value=1.1e-10 Score=99.74 Aligned_cols=102 Identities=17% Similarity=0.196 Sum_probs=79.4
Q ss_pred eecCCCCCee---ecCCceEEEeeeCCC----eEEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcE
Q 021654 190 VKNRELNPVE---MIPGGSMKIIRESPT----SAIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDY 262 (309)
Q Consensus 190 ~~~~e~~~~~---~~pgg~~~il~~~~~----~~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~ 262 (309)
+...+..+.. ..+|-+++.+..++. ..+++++||...|.|.|+..|++|||+|++++ . +..+.+++||+
T Consensus 12 v~~~~~~W~~~~~~~~Gv~~~~L~~d~~~g~~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~--~--e~~~~~~~Gd~ 87 (159)
T 3ebr_A 12 LDGNDTPWMPFAPYSNDVMVKYFKIDPVRGETITLLKAPAGMEMPRHHHTGTVIVYTVQGSWRY--K--EHDWVAHAGSV 87 (159)
T ss_dssp CCGGGSCCEECTTTCSSSEEEEEEEETTTTEEEEEEEECSSCBCCCEEESSCEEEEEEESCEEE--T--TSSCCBCTTCE
T ss_pred EcCCcCCcEeCCCCCCCEEEEEeeEcCCCCeEEEEEEECCCCCcccccCCCCEEEEEEEeEEEE--e--CCCeEECCCeE
Confidence 3444555555 456777777754422 37899999999999999999999999999997 3 22358999999
Q ss_pred EEECCCCeEEEEEc----CCceEEEEEcCccccccchh
Q 021654 263 LFTPAGDVHRVKYY----EETEFFIKWDGRWDMFFDED 296 (309)
Q Consensus 263 v~IP~g~~H~~~n~----gd~~~~i~~~~~~~i~~~e~ 296 (309)
++.|+|..|+..+. +++.+++.++|++. |++++
T Consensus 88 ~~~P~g~~H~~~~~~~~~e~~~~~~~~~G~l~-~~~~~ 124 (159)
T 3ebr_A 88 VYETASTRHTPQSAYAEGPDIITFNIVAGELL-YLDDK 124 (159)
T ss_dssp EEECSSEEECEEESSSSSSCEEEEEEEESCEE-EECTT
T ss_pred EEECCCCcceeEeCCCCCCCEEEEEEecCccE-ecCCC
Confidence 99999999999998 45667788899984 66554
No 42
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.14 E-value=2.3e-10 Score=92.36 Aligned_cols=65 Identities=23% Similarity=0.415 Sum_probs=57.1
Q ss_pred EEEEEcCCCcCC-CeecCCceEEE-EEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEE
Q 021654 216 AIVRFKAGSVEP-AHHHTFGHDLV-VLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 216 ~~~~l~pG~~~p-~H~H~~~e~vy-VlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~ 282 (309)
.++++.||...+ +|+|+..+++| |++|+++++ ++++.+.|++||++++|++++|+++|.++.++.
T Consensus 29 ~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~--i~~~~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~ 95 (125)
T 3cew_A 29 SINHLPAGAGVPFVHSHKQNEEIYGILSGKGFIT--IDGEKIELQAGDWLRIAPDGKRQISAASDSPIG 95 (125)
T ss_dssp EEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEE--ETTEEEEEETTEEEEECTTCCEEEEEBTTBCEE
T ss_pred EEEEECCCCCCCCCccCCCceEEEEEEeCEEEEE--ECCEEEEeCCCCEEEECCCCcEEEEcCCCCCEE
Confidence 567889999988 89999988765 999999995 469999999999999999999999999876554
No 43
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.14 E-value=8.5e-11 Score=106.28 Aligned_cols=67 Identities=16% Similarity=0.200 Sum_probs=59.7
Q ss_pred EEEEEcC-CCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEEE
Q 021654 216 AIVRFKA-GSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 216 ~~~~l~p-G~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~ 284 (309)
.+++++| |...++|+|+..|++||++|+++++ ++++++.|++||++|+|++++|+++|.++.++.++
T Consensus 148 ~~~~~~p~g~~~~~H~H~~~e~~~Vl~G~~~~~--i~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l 215 (243)
T 3h7j_A 148 MLAKIPGNGGEMPFHKHRNEQIGICIGGGYDMT--VEGCTVEMKFGTAYFCEPREDHGAINRSEKESKSI 215 (243)
T ss_dssp EEEEECTTTEEEEEECCSSEEEEEECSSCEEEE--ETTEEEEECTTCEEEECTTCCEEEEECSSSCEEEE
T ss_pred EEEEECCCCCcCCCEeCCCcEEEEEEECEEEEE--ECCEEEEECCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 4668999 8889999999999999999999995 56999999999999999999999999987665443
No 44
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.14 E-value=3.4e-10 Score=101.39 Aligned_cols=73 Identities=10% Similarity=0.101 Sum_probs=64.4
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEEEEcCccc
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWDGRWD 290 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~~~~~~ 290 (309)
.++.+.||...+.|.|+..+++||++|++++++ +++++.|++||++++|+|++|++++.++..++..+....+
T Consensus 40 ~~~~~~~G~~~~~h~h~~~~~~~Vl~G~~~~~i--~~~~~~l~~Gd~~~~p~~~~H~~~a~~~~~~l~i~~~~~~ 112 (227)
T 3rns_A 40 SLFSLAKDEEITAEAMLGNRYYYCFNGNGEIFI--ENNKKTISNGDFLEITANHNYSIEARDNLKLIEIGEKIGD 112 (227)
T ss_dssp EEEEECTTCEEEECSCSSCEEEEEEESEEEEEE--SSCEEEEETTEEEEECSSCCEEEEESSSEEEEEEEECC--
T ss_pred EEEEECCCCccCccccCCCEEEEEEeCEEEEEE--CCEEEEECCCCEEEECCCCCEEEEECCCcEEEEEEeeccc
Confidence 678999999999999999999999999999954 6999999999999999999999999988777756566553
No 45
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=99.13 E-value=4.9e-11 Score=93.65 Aligned_cols=79 Identities=18% Similarity=0.171 Sum_probs=60.8
Q ss_pred EEEeeeCCCe--EEEEEcCCCcCCCeecCCceE-EEEEecEEEEEEeeCC-eEEEecCCcEEEECCCCeEEEEEcCCceE
Q 021654 206 MKIIRESPTS--AIVRFKAGSVEPAHHHTFGHD-LVVLQGKKSVWNLTKG-ERFDLTVGDYLFTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 206 ~~il~~~~~~--~~~~l~pG~~~p~H~H~~~e~-vyVlsG~l~v~i~~~~-~~~~L~pGD~v~IP~g~~H~~~n~gd~~~ 281 (309)
.+++.++... ..++++||...++|+|+...+ ++|++|+++++...+. +...+++||++|+|+|+.|++.|.++.++
T Consensus 8 ~~V~ien~~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl 87 (98)
T 3lag_A 8 SEIQIDNDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEI 87 (98)
T ss_dssp EEEEEESSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEBCCSSSCE
T ss_pred eeEEEcCCeEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEeCCCceEEEEecCCcEEEEcCCCcEECEECCCCeE
Confidence 3444444443 568999999999999998766 6678999999643111 34678999999999999999999999998
Q ss_pred EEE
Q 021654 282 FIK 284 (309)
Q Consensus 282 ~i~ 284 (309)
.++
T Consensus 88 ~~I 90 (98)
T 3lag_A 88 VFL 90 (98)
T ss_dssp EEE
T ss_pred EEE
Confidence 643
No 46
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.13 E-value=2.2e-10 Score=98.65 Aligned_cols=69 Identities=16% Similarity=0.080 Sum_probs=60.0
Q ss_pred EEEEEcC-CCcCCC-eecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEEEEc
Q 021654 216 AIVRFKA-GSVEPA-HHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWD 286 (309)
Q Consensus 216 ~~~~l~p-G~~~p~-H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~~ 286 (309)
.+++++| |+..+. |.|...+++|||+|++++++ +++++.|.+||++++|++.+|+++|.++.++.++|.
T Consensus 91 ~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl--~g~~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~V 161 (166)
T 2vpv_A 91 GILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTV--CKNKFLSVKGSTFQIPAFNEYAIANRGNDEAKMFFV 161 (166)
T ss_dssp EEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEE--TTEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred EEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEE--CCEEEEEcCCCEEEECCCCCEEEEECCCCCEEEEEE
Confidence 5789999 765544 56777777999999999954 699999999999999999999999999999888876
No 47
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.13 E-value=2.2e-10 Score=95.97 Aligned_cols=67 Identities=27% Similarity=0.250 Sum_probs=59.8
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeE-EEecCCcEEEECCCCeEEEEEcCCceEEEE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGER-FDLTVGDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~-~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~ 284 (309)
..+++.||...++|+|+..|++||++|+++++ ++++. +.|++||++++|++++|++.|.++.++.++
T Consensus 51 ~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~--~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l 118 (147)
T 2f4p_A 51 YDVVFEPGARTHWHSHPGGQILIVTRGKGFYQ--ERGKPARILKKGDVVEIPPNVVHWHGAAPDEELVHI 118 (147)
T ss_dssp EEEEECTTCEECSEECTTCEEEEEEEEEEEEE--ETTSCCEEEETTCEEEECTTCCEEEEEBTTBCEEEE
T ss_pred EEEEECCCCccCceECCCceEEEEEeCEEEEE--ECCEEEEEECCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 56789999999999999999999999999995 45787 999999999999999999999988766443
No 48
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.12 E-value=1.9e-10 Score=93.83 Aligned_cols=58 Identities=22% Similarity=0.170 Sum_probs=48.0
Q ss_pred cCCCcCCCeecCC-ceEEEEEecEEEEEEeeCC-eEEEecCCcEEEECCCCeEEEEEcCCce
Q 021654 221 KAGSVEPAHHHTF-GHDLVVLQGKKSVWNLTKG-ERFDLTVGDYLFTPAGDVHRVKYYEETE 280 (309)
Q Consensus 221 ~pG~~~p~H~H~~-~e~vyVlsG~l~v~i~~~~-~~~~L~pGD~v~IP~g~~H~~~n~gd~~ 280 (309)
+||...++|+|+. .|++||++|++++++ ++ +.+.|++||++++|+|++|++.|.++..
T Consensus 51 ~~g~~~~~H~H~~~~E~~~vl~G~~~~~~--~~~~~~~l~~Gd~~~ip~g~~H~~~~~~~~~ 110 (134)
T 2o8q_A 51 GKEAKPTWHTHTVGFQLFYVLRGWVEFEY--EDIGAVMLEAGGSAFQPPGVRHRELRHSDDL 110 (134)
T ss_dssp -----CCCEEECCSCEEEEEEESEEEEEE--TTTEEEEEETTCEEECCTTCCEEEEEECTTC
T ss_pred CCCCCCCCEECCCCcEEEEEEeCEEEEEE--CCcEEEEecCCCEEEECCCCcEEeEeCCCCe
Confidence 4788889999998 889999999999964 57 9999999999999999999999976543
No 49
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.11 E-value=2.4e-10 Score=99.08 Aligned_cols=67 Identities=13% Similarity=0.082 Sum_probs=58.9
Q ss_pred EEEEEcCCCcCC--CeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEEEE
Q 021654 216 AIVRFKAGSVEP--AHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 216 ~~~~l~pG~~~p--~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~ 285 (309)
..++++||...+ +|+|+..|++||++|+++++ ++++.+.|.+||++++|++++|+++|.++.++ ++|
T Consensus 107 ~~~~~~pg~~~~~~~H~h~~~E~~~Vl~G~~~~~--~~~~~~~l~~GD~i~i~~~~~H~~~n~~~~~~-~l~ 175 (192)
T 1y9q_A 107 FEITLLDHHQQMSSPHALGVIEYIHVLEGIMKVF--FDEQWHELQQGEHIRFFSDQPHGYAAVTEKAV-FQN 175 (192)
T ss_dssp EEEEECTTCEEEECCCSTTCEEEEEEEESCEEEE--ETTEEEEECTTCEEEEECSSSEEEEESSSCEE-EEE
T ss_pred EEEEECCCCCccCCCCCCCCEEEEEEEEeEEEEE--ECCEEEEeCCCCEEEEcCCCCeEeECCCCCcE-EEE
Confidence 567899998765 78888889999999999995 46999999999999999999999999998777 554
No 50
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.10 E-value=4.7e-10 Score=100.47 Aligned_cols=67 Identities=22% Similarity=0.310 Sum_probs=60.6
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEE-cCCceEEEE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKY-YEETEFFIK 284 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n-~gd~~~~i~ 284 (309)
.+++++||...++|+|+..+.+||++|+++++ .+++++.|++||++|+|++++|+++| .++..++++
T Consensus 156 ~~~~~~~G~~~~~H~H~~~e~~~Vl~G~~~~~--i~g~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~ll~ 223 (227)
T 3rns_A 156 TIMSFWKGESLDPHKAPGDALVTVLDGEGKYY--VDGKPFIVKKGESAVLPANIPHAVEAETENFKMLLI 223 (227)
T ss_dssp EEEEECTTCEEEEECCSSEEEEEEEEEEEEEE--ETTEEEEEETTEEEEECTTSCEEEECCSSCEEEEEE
T ss_pred EEEEECCCCccCCEECCCcEEEEEEeEEEEEE--ECCEEEEECCCCEEEECCCCcEEEEeCCCCEEEEEE
Confidence 67899999999999999999999999999995 46999999999999999999999999 777776644
No 51
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.09 E-value=4.8e-10 Score=101.73 Aligned_cols=68 Identities=18% Similarity=0.197 Sum_probs=61.3
Q ss_pred EEEEEcCCCcCCC-eecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEEEE
Q 021654 216 AIVRFKAGSVEPA-HHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 216 ~~~~l~pG~~~p~-H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~ 285 (309)
.+++++||+..+. |+|..+|.+|||+|+++++ .+++++.|++||++|++++.+|+++|.+++++.+++
T Consensus 168 ~~~tl~PG~~~~~~~~h~~ee~~~vLeG~~~~~--~~~~~~~l~~GD~~~~~~~~pH~~~n~g~~~~~yl~ 236 (246)
T 1sfn_A 168 STMSFAPGASLPYAEVHYMEHGLLMLEGEGLYK--LEENYYPVTAGDIIWMGAHCPQWYGALGRNWSKYLL 236 (246)
T ss_dssp EEEEECTTCBCSSCBCCSSCEEEEEEECEEEEE--ETTEEEEEETTCEEEECTTCCEEEEEESSSCEEEEE
T ss_pred EEEEECCCCccCcccCCCceEEEEEEECEEEEE--ECCEEEEcCCCCEEEECCCCCEEEEcCCCCCEEEEE
Confidence 6789999999986 6788888899999999995 569999999999999999999999999998886554
No 52
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.08 E-value=1.3e-09 Score=100.32 Aligned_cols=93 Identities=15% Similarity=0.189 Sum_probs=71.2
Q ss_pred EEeecCCCCCeeec--CCceEEEeeeCC---C--eEEEEEcCCCcCCC-eecCCceEEEEEecEEEEEEeeCCeEEEecC
Q 021654 188 CLVKNRELNPVEMI--PGGSMKIIRESP---T--SAIVRFKAGSVEPA-HHHTFGHDLVVLQGKKSVWNLTKGERFDLTV 259 (309)
Q Consensus 188 ~v~~~~e~~~~~~~--pgg~~~il~~~~---~--~~~~~l~pG~~~p~-H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~p 259 (309)
.+.+..+..+..+. .|...+.+.... . ..+++++||...+. |+|+..|++||++|+++++ ++++.+.|++
T Consensus 150 ~v~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~l~pg~~~~~~H~H~~~E~~yVl~G~~~~~--i~~~~~~l~~ 227 (274)
T 1sef_A 150 VVGSIHDQQPEEYEGMTDVLLWSLLPKEFDFDMNMHILSFEPGASHAYIETHVQEHGAYLISGQGMYN--LDNEWYPVEK 227 (274)
T ss_dssp EEEEGGGSCCEEGGGCTTEEEEECSCSSTTCSEEEEEEEECTTCBCSSCBCCSCCEEEEEEECEEEEE--ETTEEEEEET
T ss_pred eeCChHHCCccccCCCCCeEEEEeCCcccCCCEEEEEEEECCCCccCcceeccCeEEEEEEeCEEEEE--ECCEEEEECC
Confidence 34555555554432 344455543321 1 25678999999998 9999999999999999995 4699999999
Q ss_pred CcEEEECCCCeEEEEEcCC-ceEE
Q 021654 260 GDYLFTPAGDVHRVKYYEE-TEFF 282 (309)
Q Consensus 260 GD~v~IP~g~~H~~~n~gd-~~~~ 282 (309)
||++++|++++|+++|.++ .++.
T Consensus 228 GD~i~i~~~~~H~~~n~~~~~~~~ 251 (274)
T 1sef_A 228 GDYIFMSAYVPQAAYAVGREEPLM 251 (274)
T ss_dssp TCEEEECTTCCEEEEEECSSSCEE
T ss_pred CCEEEECCCCCEEEEeCCCCCCEE
Confidence 9999999999999999988 6654
No 53
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.07 E-value=5e-10 Score=96.97 Aligned_cols=71 Identities=17% Similarity=0.130 Sum_probs=59.2
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEee--CCeEEEecCCcEEEECCCCeEEEEEcCCc-eEEEEEc
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLT--KGERFDLTVGDYLFTPAGDVHRVKYYEET-EFFIKWD 286 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~--~~~~~~L~pGD~v~IP~g~~H~~~n~gd~-~~~i~~~ 286 (309)
..++++||+..++|+|...|++||++|++++.+.. +++++.|++||++++|+|.+|++.|.++. ++.+.+.
T Consensus 44 ~~~~l~pg~~~~pHh~~a~E~~yVl~G~~~v~v~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v 117 (178)
T 1dgw_A 44 LEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKF 117 (178)
T ss_dssp EEEEECTTEEEEEEEESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEE
T ss_pred EEEEecCCcEecCcCCCCCEEEEEEeEEEEEEEEeCCCcEEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEE
Confidence 56789999999999455678899999999996531 25789999999999999999999999875 6655554
No 54
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=99.07 E-value=5.7e-10 Score=98.20 Aligned_cols=69 Identities=23% Similarity=0.273 Sum_probs=59.3
Q ss_pred EEEEEcCCCcCCCeecCC-ceEEEEEecEEEEEEeeC----Ce--EEEecCCcEEEECCCCeEEEEEcCCceEEEE
Q 021654 216 AIVRFKAGSVEPAHHHTF-GHDLVVLQGKKSVWNLTK----GE--RFDLTVGDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~-~e~vyVlsG~l~v~i~~~----~~--~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~ 284 (309)
..+++.||...++|+|+. .|++||++|++++++..+ ++ ++.|++||++++|+|.+|+++|.+++++.++
T Consensus 75 ~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l 150 (201)
T 1fi2_A 75 NRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMV 150 (201)
T ss_dssp EEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEE
T ss_pred EEEEECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEE
Confidence 567899999999999996 588999999999976422 45 8999999999999999999999987666543
No 55
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.05 E-value=2.2e-10 Score=90.11 Aligned_cols=68 Identities=21% Similarity=0.236 Sum_probs=55.8
Q ss_pred EEEEEcCCCcCCCeecCCceE-EEEEecEEEEEEeeCCe--EEEecCCcEEEECCCCeEEEEEcCCceEEEE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHD-LVVLQGKKSVWNLTKGE--RFDLTVGDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~-vyVlsG~l~v~i~~~~~--~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~ 284 (309)
..++++||...++|.|+...+ +++++|++++... +++ ...+++||++++|+|++|++.|.+++++.++
T Consensus 20 ~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~~-dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi 90 (98)
T 2ozi_A 20 TEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAP-DGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFL 90 (98)
T ss_dssp EEEEECTTEECCSEECCSCEEEEESSCBC-CEECT-TSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEE
T ss_pred EEEEECCCCccCcEeCCCCEEEEEEeeEEEEEEeC-CCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEE
Confidence 568999999999999997754 5568999998532 443 5799999999999999999999999887643
No 56
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=99.05 E-value=7e-10 Score=95.38 Aligned_cols=104 Identities=21% Similarity=0.254 Sum_probs=77.6
Q ss_pred EeecCCCCCeeec---CCceEEEeeeCCC----eEEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCc
Q 021654 189 LVKNRELNPVEMI---PGGSMKIIRESPT----SAIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGD 261 (309)
Q Consensus 189 v~~~~e~~~~~~~---pgg~~~il~~~~~----~~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD 261 (309)
.+...+..+.... +|-+++.+..++. ..+++++||...|.|+|+..|++|||+|++.. . ++..+.+++||
T Consensus 12 ~v~~~~~~W~~~~~~~~GV~~~~L~~~~~~g~~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~f~~--~-~~~~~~~~aGd 88 (165)
T 3cjx_A 12 TVDTTAHPFLKALGGHEGTDIFPLFMDPYNGLMVMRASFAPGLTLPLHFHTGTVHMYTISGCWYY--T-EYPGQKQTAGC 88 (165)
T ss_dssp EEETTSSCCBCSGGGCTTEEEEEEEEETTTTEEEEEEEECTTCBCCEEEESSCEEEEEEESEEEE--T-TCTTSCEETTE
T ss_pred EEccccCCcEECCCCCCCEEEEEeEeCCCCCcEEEEEEECCCCcCCcccCCCCEEEEEEEEEEEE--C-CCceEEECCCe
Confidence 3455555554443 3666776654433 37899999999999999999999999999998 3 22257889999
Q ss_pred EEEECCCCeEEEEEcC----CceEEEEEcCccccccchh
Q 021654 262 YLFTPAGDVHRVKYYE----ETEFFIKWDGRWDMFFDED 296 (309)
Q Consensus 262 ~v~IP~g~~H~~~n~g----d~~~~i~~~~~~~i~~~e~ 296 (309)
+++.|+|..|...+.. ++.+++...|++. |++++
T Consensus 89 ~~~~P~g~~H~~~a~~~~~~gci~l~v~~GpL~-~~~~~ 126 (165)
T 3cjx_A 89 YLYEPGGSIHQFNTPRDNEGQTEVIFMLSGCNV-NFTQD 126 (165)
T ss_dssp EEEECTTCEECEECCTTCSSCEEEEEEEESCEE-EECTT
T ss_pred EEEeCCCCceeeEeCCCCCCCcEEEEEEeccce-ecCCC
Confidence 9999999999999976 4446666688774 55543
No 57
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.05 E-value=6.3e-10 Score=90.38 Aligned_cols=59 Identities=22% Similarity=0.408 Sum_probs=53.1
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcC
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYE 277 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~g 277 (309)
.+++++||...++|. +.+|++|||+|++++++ +++++.|++||++++|+|++|++.|.+
T Consensus 43 ~~~~~~pG~~~~~H~-~~~E~~~Vl~G~~~~~~--~g~~~~l~~GD~v~ip~g~~H~~~~~~ 101 (119)
T 3lwc_A 43 GYGRYAPGQSLTETM-AVDDVMIVLEGRLSVST--DGETVTAGPGEIVYMPKGETVTIRSHE 101 (119)
T ss_dssp EEEEECTTCEEEEEC-SSEEEEEEEEEEEEEEE--TTEEEEECTTCEEEECTTCEEEEEEEE
T ss_pred EEEEECCCCCcCccC-CCCEEEEEEeCEEEEEE--CCEEEEECCCCEEEECCCCEEEEEcCC
Confidence 678999999888775 77788999999999964 699999999999999999999999975
No 58
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.04 E-value=2.9e-10 Score=89.31 Aligned_cols=59 Identities=17% Similarity=0.189 Sum_probs=48.5
Q ss_pred EEEEcCCCcCCCeecCC-ceEEEEEecEEEEEEeeCC-eEEEecCCcEEEECCCCeEEEEEcCC
Q 021654 217 IVRFKAGSVEPAHHHTF-GHDLVVLQGKKSVWNLTKG-ERFDLTVGDYLFTPAGDVHRVKYYEE 278 (309)
Q Consensus 217 ~~~l~pG~~~p~H~H~~-~e~vyVlsG~l~v~i~~~~-~~~~L~pGD~v~IP~g~~H~~~n~gd 278 (309)
.+.+.||. .++|+|+. .|++||++|++++++ ++ +.+.|++||++++|+|++|+++|.++
T Consensus 32 ~~~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~~~--~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~ 92 (107)
T 2i45_A 32 HLVKLLGD-YGWHTHGYSDKVLFAVEGDMAVDF--ADGGSMTIREGEMAVVPKSVSHRPRSENG 92 (107)
T ss_dssp EEEEEEEE-CCCBCC--CCEEEEESSSCEEEEE--TTSCEEEECTTEEEEECTTCCEEEEEEEE
T ss_pred EEEECCCC-CcceeCCCCCEEEEEEeCEEEEEE--CCCcEEEECCCCEEEECCCCcEeeEeCCC
Confidence 34556665 56999998 888999999999964 57 99999999999999999999999644
No 59
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=99.02 E-value=6.5e-10 Score=99.18 Aligned_cols=72 Identities=18% Similarity=0.210 Sum_probs=63.3
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceE--EEEEcCcc
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEF--FIKWDGRW 289 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~--~i~~~~~~ 289 (309)
.++.+.||...|+|.|+.+|.+|||+|.+++.+. +++.+.+.|||++++|+|++|++++ +++++ +++|.|..
T Consensus 135 G~v~l~PG~~yP~HsHp~EEiy~VLsG~~e~~v~-~g~~~~l~pGd~v~ipsgv~Ha~rt-~dePllalwvW~G~~ 208 (217)
T 4b29_A 135 TVGYWGPGLDYGWHEHLPEELYSVVSGRALFHLR-NAPDLMLEPGQTRFHPANAPHAMTT-LTDPILTLVLWRGAG 208 (217)
T ss_dssp EEEEECSSCEEEEEECSSEEEEEEEEECEEEEET-TSCCEEECTTCEEEECTTCCEEEEC-CSSCEEEEEEEESTT
T ss_pred EEEEECCCCcCCCCCCCCceEEEEEeCCEEEEEC-CCCEEecCCCCEEEcCCCCceeEEE-CCccEEEEEEEeCCC
Confidence 6789999999999999999999999999999642 4889999999999999999999995 77887 67777754
No 60
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.00 E-value=1.7e-09 Score=99.63 Aligned_cols=66 Identities=15% Similarity=0.178 Sum_probs=60.4
Q ss_pred EEEEEcCCCcCCC-eecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEE
Q 021654 216 AIVRFKAGSVEPA-HHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 216 ~~~~l~pG~~~p~-H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i 283 (309)
.++++.||..+|. |+|.+++.+|||+|++.+. ++++.+.+++||++|++++++|.+.|.+++++.+
T Consensus 189 ~~~t~~PG~~~p~~e~H~~eh~~~vL~G~g~y~--l~~~~~~V~~GD~i~~~~~~~h~~~n~G~e~~~y 255 (266)
T 4e2q_A 189 HTMDFQPGEFLNVKEVHYNQHGLLLLEGQGIYR--LGDNWYPVQAGDVIWMAPFVPQWYAALGKTRSRY 255 (266)
T ss_dssp EEEEECTTCBCSSCCCCSCCEEEEEEECEEEEE--ETTEEEEEETTCEEEECTTCCEEEEEESSSCEEE
T ss_pred EEEEECCCcCcCCceEcccceEEEEEeceEEEE--ECCEEEEecCCCEEEECCCCcEEEEeCCCCCEEE
Confidence 6789999999996 7888889999999999995 5699999999999999999999999999888753
No 61
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=98.99 E-value=4.9e-10 Score=101.79 Aligned_cols=68 Identities=13% Similarity=0.148 Sum_probs=57.9
Q ss_pred EEEEEcCCCcCCCeecC-CceEEEEEecEEEEEEee------CCe------------EEEecCCcEEEECCCCeEEEEEc
Q 021654 216 AIVRFKAGSVEPAHHHT-FGHDLVVLQGKKSVWNLT------KGE------------RFDLTVGDYLFTPAGDVHRVKYY 276 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~-~~e~vyVlsG~l~v~i~~------~~~------------~~~L~pGD~v~IP~g~~H~~~n~ 276 (309)
..++++||...++|+|+ ..|++||++|++++++.+ +++ .+.+.|||++++|+|++|+++|.
T Consensus 46 ~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~ 125 (239)
T 2xlg_A 46 AHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNP 125 (239)
T ss_dssp EEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEECC
T ss_pred EEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCCEEEEeC
Confidence 45688999999999999 556699999999997611 566 99999999999999999999999
Q ss_pred CCceEEE
Q 021654 277 EETEFFI 283 (309)
Q Consensus 277 gd~~~~i 283 (309)
++.++.+
T Consensus 126 ~~~~~~~ 132 (239)
T 2xlg_A 126 TDKTLPI 132 (239)
T ss_dssp SSSCEEE
T ss_pred CCCCEEE
Confidence 9876543
No 62
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.98 E-value=1.7e-09 Score=101.04 Aligned_cols=89 Identities=24% Similarity=0.323 Sum_probs=70.3
Q ss_pred EEeecCCCCCeeecCCceEEEeeeC----CC--eEEEEEcCCCcCCCeecC-CceEEEEEecEEEEEEeeCCeEEEecCC
Q 021654 188 CLVKNRELNPVEMIPGGSMKIIRES----PT--SAIVRFKAGSVEPAHHHT-FGHDLVVLQGKKSVWNLTKGERFDLTVG 260 (309)
Q Consensus 188 ~v~~~~e~~~~~~~pgg~~~il~~~----~~--~~~~~l~pG~~~p~H~H~-~~e~vyVlsG~l~v~i~~~~~~~~L~pG 260 (309)
.+++..+...+. ..|...+++... .. ...+++.||...++|+|+ ..|++||++|++++++ +++.+.|++|
T Consensus 16 ~v~r~~~~~~~~-~~g~~~~~l~~~~~~~~~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~--~~~~~~l~~G 92 (337)
T 1y3t_A 16 YLLRSGEGERYL-FGRQVATVMANGRSTGDLFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTL--DGERYLLISG 92 (337)
T ss_dssp EEECTTCSEEEE-ETTEEEEEEECHHHHTSSEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEE--TTEEEEECTT
T ss_pred EEecCCCccEEE-ECCeEEEEEeecCCCCCeEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEE--CCEEEEECCC
Confidence 466777665443 355555655422 11 156789999999999999 7888999999999964 6999999999
Q ss_pred cEEEECCCCeEEEEEcCCc
Q 021654 261 DYLFTPAGDVHRVKYYEET 279 (309)
Q Consensus 261 D~v~IP~g~~H~~~n~gd~ 279 (309)
|++++|+|++|+++|.++.
T Consensus 93 d~~~~p~~~~H~~~n~~~~ 111 (337)
T 1y3t_A 93 DYANIPAGTPHSYRMQSHR 111 (337)
T ss_dssp CEEEECTTCCEEEEECSTT
T ss_pred CEEEECCCCcEEEEECCCC
Confidence 9999999999999999873
No 63
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=98.98 E-value=1.6e-09 Score=94.77 Aligned_cols=69 Identities=20% Similarity=0.251 Sum_probs=58.1
Q ss_pred EEEEEcCCCc------CCCeecCC---ceEEEEEecEEEEEEeeCCeE-----EEecCCcEEEECCCCeEEEEEcCCceE
Q 021654 216 AIVRFKAGSV------EPAHHHTF---GHDLVVLQGKKSVWNLTKGER-----FDLTVGDYLFTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 216 ~~~~l~pG~~------~p~H~H~~---~e~vyVlsG~l~v~i~~~~~~-----~~L~pGD~v~IP~g~~H~~~n~gd~~~ 281 (309)
.+++++||.. .+.|+|+. .|.+||++|++++++. ++. +.|++||++++|++++|++.|.+++++
T Consensus 70 ~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~--~~~g~~~~~~l~~GD~v~ip~g~~H~~~N~g~~~~ 147 (190)
T 1x82_A 70 ATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQ--TPEGDAKWISMEPGTVVYVPPYWAHRTVNIGDEPF 147 (190)
T ss_dssp EEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEE--CTTCCEEEEEECTTCEEEECTTCEEEEEECSSSCE
T ss_pred EEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEc--CcCCcEEEEEECCCcEEEECCCCeEEEEECCcccE
Confidence 5568999988 78999975 5889999999999765 544 999999999999999999999998776
Q ss_pred EEEEc
Q 021654 282 FIKWD 286 (309)
Q Consensus 282 ~i~~~ 286 (309)
.+++.
T Consensus 148 ~~l~v 152 (190)
T 1x82_A 148 IFLAI 152 (190)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 54433
No 64
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=98.98 E-value=1.8e-09 Score=83.09 Aligned_cols=56 Identities=20% Similarity=0.287 Sum_probs=49.3
Q ss_pred CcCCCeecCC-ceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceE
Q 021654 224 SVEPAHHHTF-GHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 224 ~~~p~H~H~~-~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~ 281 (309)
...++|+|+. .|++||++|+++++ .+++.+.+++||++++|+|++|++.|.++..+
T Consensus 40 ~~~~~H~H~~~~e~~~v~~G~~~~~--~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~ 96 (102)
T 3d82_A 40 GEFVWHEHADTDEVFIVMEGTLQIA--FRDQNITLQAGEMYVIPKGVEHKPMAKEECKI 96 (102)
T ss_dssp EECCCBCCTTCCEEEEEEESEEEEE--CSSCEEEEETTEEEEECTTCCBEEEEEEEEEE
T ss_pred CCCCceeCCCCcEEEEEEeCEEEEE--ECCEEEEEcCCCEEEECCCCeEeeEcCCCCEE
Confidence 3578999998 89999999999995 46899999999999999999999999864444
No 65
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.97 E-value=8.5e-10 Score=102.04 Aligned_cols=70 Identities=21% Similarity=0.330 Sum_probs=61.0
Q ss_pred EEEEEcCCCcC--CCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEEEEcC
Q 021654 216 AIVRFKAGSVE--PAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWDG 287 (309)
Q Consensus 216 ~~~~l~pG~~~--p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~~~ 287 (309)
.+++++||... +.|.|...|++||++|++++++ +++++.|++||++++|++++|+++|.++.++.++|..
T Consensus 71 ~~~~l~PG~~~~~~~h~H~~eE~~~Vl~G~l~v~v--~g~~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l~v~ 142 (278)
T 1sq4_A 71 YIVELAPNGGSDKPEQDPNAEAVLFVVEGELSLTL--QGQVHAMQPGGYAFIPPGADYKVRNTTGQHTRFHWIR 142 (278)
T ss_dssp EEEEEEEEEEESSCCCCTTEEEEEEEEESCEEEEE--SSCEEEECTTEEEEECTTCCEEEECCSSSCEEEEEEE
T ss_pred EEEEECCCCccCCCCcCCCceEEEEEEeCEEEEEE--CCEEEEECCCCEEEECCCCcEEEEECCCCCEEEEEEE
Confidence 56789999876 6688988888999999999964 5899999999999999999999999998887666654
No 66
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=98.96 E-value=5.9e-09 Score=83.31 Aligned_cols=57 Identities=23% Similarity=0.367 Sum_probs=48.2
Q ss_pred cCCCcCCC---eecCCceEEEEEecEEEEEEeeCCeE--EEecCCcEEEECCCCeEEEEEcCCc
Q 021654 221 KAGSVEPA---HHHTFGHDLVVLQGKKSVWNLTKGER--FDLTVGDYLFTPAGDVHRVKYYEET 279 (309)
Q Consensus 221 ~pG~~~p~---H~H~~~e~vyVlsG~l~v~i~~~~~~--~~L~pGD~v~IP~g~~H~~~n~gd~ 279 (309)
.+|...+. |.|+..|++||++|++++++ +++. +.|++||++++|++++|++.|.++.
T Consensus 38 ~~g~~~~~~~~~~~~~~E~~~Vl~G~~~l~~--~~~~~~~~l~~Gd~i~ipa~~~H~~~n~~~~ 99 (112)
T 2opk_A 38 SNGQASPPGFWYDSPQDEWVMVVSGSAGIEC--EGDTAPRVMRPGDWLHVPAHCRHRVAWTDGG 99 (112)
T ss_dssp ESSCCCCTTCCBCCSSEEEEEEEESCEEEEE--TTCSSCEEECTTEEEEECTTCCEEEEEECSS
T ss_pred eCCccCCCCccccCCccEEEEEEeCeEEEEE--CCEEEEEEECCCCEEEECCCCcEEEEeCCCC
Confidence 45555443 77888899999999999964 5777 9999999999999999999999865
No 67
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=98.95 E-value=2e-09 Score=98.20 Aligned_cols=68 Identities=18% Similarity=0.215 Sum_probs=57.3
Q ss_pred EEEEEcCCCcCCCeecC-CceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCC-ceEEEEE
Q 021654 216 AIVRFKAGSVEPAHHHT-FGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEE-TEFFIKW 285 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~-~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd-~~~~i~~ 285 (309)
.+++++||...+.|+|+ ..|++||++|+++++ ++++.+.|++||++++|++++|+++|.++ .++.+++
T Consensus 182 ~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~--i~~~~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l~ 251 (261)
T 1rc6_A 182 HILSFAPGASHGYIETHVQEHGAYILSGQGVYN--LDNNWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIY 251 (261)
T ss_dssp EEEEECTTCCBEEEEEESSCEEEEEEESEEEEE--SSSCEEEEETTCEEEECSSEEEEEEEC----CEEEEE
T ss_pred EEEEECCCCccCcccCCCceEEEEEEEeEEEEE--ECCEEEEeCCCCEEEECCCCcEEeEeCCCCcCEEEEE
Confidence 67899999999999996 567799999999995 56999999999999999999999999988 7765443
No 68
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.95 E-value=1.9e-09 Score=85.19 Aligned_cols=64 Identities=22% Similarity=0.217 Sum_probs=53.2
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeC-CeEEEecCCcEEEECCCCeEEEEEcCCceEEE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTK-GERFDLTVGDYLFTPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~-~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i 283 (309)
.+.++.||.. ++| |+..|++||++|+++++ .+ ++.+.|+|||++++|+|++|+++|.++...++
T Consensus 34 ~~~~~~pg~~-~~h-H~~~E~~~Vl~G~~~~~--i~~g~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~y 98 (101)
T 1o5u_A 34 PIWEKEVSEF-DWY-YDTNETCYILEGKVEVT--TEDGKKYVIEKGDLVTFPKGLRCRWKVLEPVRKHY 98 (101)
T ss_dssp CEEEECSEEE-EEE-CSSCEEEEEEEEEEEEE--ETTCCEEEEETTCEEEECTTCEEEEEEEEEEEEEE
T ss_pred EEEEeCCCcc-ccc-CCceEEEEEEeCEEEEE--ECCCCEEEECCCCEEEECCCCcEEEEeCCCeeEEE
Confidence 3556677653 456 88899999999999995 45 88999999999999999999999988766553
No 69
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=98.94 E-value=1.6e-09 Score=98.76 Aligned_cols=70 Identities=19% Similarity=0.269 Sum_probs=59.0
Q ss_pred EEEEEcCCCcCCCeec--CCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEEEEcC
Q 021654 216 AIVRFKAGSVEPAHHH--TFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWDG 287 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H--~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~~~ 287 (309)
.+++++||+..+.|.| ..+|++||++|+++++ .+++++.|.+||++++|++.+|+++|.++.++.++|..
T Consensus 62 ~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~--~~~~~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~v~ 133 (261)
T 1rc6_A 62 YLVTLHQNGGNQQGFGGEGIETFLYVISGNITAK--AEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYK 133 (261)
T ss_dssp EEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEE--ETTEEEEEETTEEEEECTTCCCEEEECSSSCEEEEEEE
T ss_pred EEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEE--ECCEEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEE
Confidence 5788999987765543 3456799999999996 46999999999999999999999999998888777665
No 70
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.93 E-value=4.8e-09 Score=100.44 Aligned_cols=99 Identities=20% Similarity=0.245 Sum_probs=73.0
Q ss_pred EeecCCCCCeeecCCceEEEeeeC--C---C--eEEEEEcCCCcCCCeecCC-ceEEEEEecEEEEEEee-C--CeEEEe
Q 021654 189 LVKNRELNPVEMIPGGSMKIIRES--P---T--SAIVRFKAGSVEPAHHHTF-GHDLVVLQGKKSVWNLT-K--GERFDL 257 (309)
Q Consensus 189 v~~~~e~~~~~~~pgg~~~il~~~--~---~--~~~~~l~pG~~~p~H~H~~-~e~vyVlsG~l~v~i~~-~--~~~~~L 257 (309)
+.+..+..+. ..+++..+.+... + . ...++++||...++|+|+. .|++||++|++++++.. + ++++.|
T Consensus 227 v~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l 305 (385)
T 1j58_A 227 TYRLLEQEPI-ESEGGKVYIADSTNFKVSKTIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDGHARTFNY 305 (385)
T ss_dssp EEEGGGSCCE-ECSSEEEEEESTTTSTTCCSCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEETTEEEEEEE
T ss_pred eeecccCCCe-eCCCceEEEeecccCCcccceEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCCCcEEEEEE
Confidence 3444444443 3456665544222 1 1 2678999999999999998 88899999999996531 1 578999
Q ss_pred cCCcEEEECCCCeEEEEEcCCceEEEEEcCc
Q 021654 258 TVGDYLFTPAGDVHRVKYYEETEFFIKWDGR 288 (309)
Q Consensus 258 ~pGD~v~IP~g~~H~~~n~gd~~~~i~~~~~ 288 (309)
.+||++++|++.+|++.|.++.++.+++...
T Consensus 306 ~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~ 336 (385)
T 1j58_A 306 QAGDVGYVPFAMGHYVENIGDEPLVFLEIFK 336 (385)
T ss_dssp ESSCEEEECTTCBEEEEECSSSCEEEEEEES
T ss_pred cCCCEEEECCCCeEEEEECCCCCEEEEEEEC
Confidence 9999999999999999999887765554433
No 71
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=98.93 E-value=5.8e-09 Score=88.42 Aligned_cols=98 Identities=11% Similarity=0.119 Sum_probs=65.6
Q ss_pred ceeEEeecCCCCC-----ee-ecCCceEEE--eeeCCC-----eEEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeC
Q 021654 185 SICCLVKNRELNP-----VE-MIPGGSMKI--IRESPT-----SAIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTK 251 (309)
Q Consensus 185 ~~~~v~~~~e~~~-----~~-~~pgg~~~i--l~~~~~-----~~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~ 251 (309)
++..++|..++.. +. ..|+....+ +...+. ..++++. +...++| |+.+|..|||+|++++++ +
T Consensus 25 ~gi~~vk~~~v~~~~~er~~~G~p~~~v~i~~l~s~~~~~~~s~g~~~~e-~~~~~~~-~~~eE~~yVLeG~~~l~i--~ 100 (151)
T 4axo_A 25 SGITSIKLPTVKVSESDRLDTGNPSDVVYTKDLFTLEESPRLGCGMMEMK-ETTFDWT-LNYDEIDYVIDGTLDIII--D 100 (151)
T ss_dssp TSCEEECGGGCCCCGGGBCCCSCTTCCEEEEECSCTTTCSSCEEEEEEEE-EEEEEEE-CSSEEEEEEEEEEEEEEE--T
T ss_pred CCeEEEECCcEEccchhccccCCCCCCEEEEEeecCCCCCcEEEEEEEEc-CccccEe-CCCcEEEEEEEeEEEEEE--C
Confidence 5567777766653 11 234444433 333221 2566776 4444433 456677999999999964 6
Q ss_pred CeEEEecCCcEEEECCCCeEEEEEcCCceEEEEEcCc
Q 021654 252 GERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWDGR 288 (309)
Q Consensus 252 ~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~~~~ 288 (309)
++++.|+|||+++||+|++|++.|.+ ++.+.|+..
T Consensus 101 g~~~~l~~GD~i~iP~G~~h~~~n~~--~a~~l~V~~ 135 (151)
T 4axo_A 101 GRKVSASSGELIFIPKGSKIQFSVPD--YARFIYVTY 135 (151)
T ss_dssp TEEEEEETTCEEEECTTCEEEEEEEE--EEEEEEEEE
T ss_pred CEEEEEcCCCEEEECCCCEEEEEeCC--CEEEEEEEC
Confidence 99999999999999999999999983 444444433
No 72
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.90 E-value=2.4e-09 Score=98.65 Aligned_cols=69 Identities=16% Similarity=0.167 Sum_probs=59.8
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeC-CeEEEecCCcEEEECCCCeEEEEEcCCceEEEEEcCc
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTK-GERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWDGR 288 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~-~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~~~~ 288 (309)
.++++.||+..+.|.|..+|++||++|+++++ .+ ++++.|++||++|+|++.+|+++|. .++.++|+..
T Consensus 73 ~lv~l~PGg~s~~~~h~~EEfiyVleG~l~l~--l~~g~~~~L~~Gds~y~p~~~~H~~~N~--~~Ar~l~V~k 142 (266)
T 4e2q_A 73 YLAKMKEMSSSGLPPQDIERLIFVVEGAVTLT--NTSSSSKKLTVDSYAYLPPNFHHSLDCV--ESATLVVFER 142 (266)
T ss_dssp EEEEECSSEECCCCCTTEEEEEEEEEECEEEE--C--CCCEEECTTEEEEECTTCCCEEEES--SCEEEEEEEE
T ss_pred EEEEECcCCcCCCCCCCCeEEEEEEEEEEEEE--ECCCcEEEEcCCCEEEECCCCCEEEEeC--CCEEEEEEEe
Confidence 78899999999889999999999999999995 56 8999999999999999999999996 4566666643
No 73
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.90 E-value=9e-09 Score=97.51 Aligned_cols=71 Identities=21% Similarity=0.303 Sum_probs=60.8
Q ss_pred EEEEEcCCCcCCCeecCC-ceEEEEEecEEEEEEee-CCe--EEEecCCcEEEECCCCeEEEEEcCCceEEEEEc
Q 021654 216 AIVRFKAGSVEPAHHHTF-GHDLVVLQGKKSVWNLT-KGE--RFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWD 286 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~-~e~vyVlsG~l~v~i~~-~~~--~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~~ 286 (309)
..++++||...++|+|+. .|.+||++|++++++.. +++ ++.|++||++++|++.+|.+.|.+++++.+++.
T Consensus 237 ~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~ 311 (361)
T 2vqa_A 237 ALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTVFASEGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVV 311 (361)
T ss_dssp EEEEECTTCEEEEEECSSCCEEEEEEESCEEEEEECSTTCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEE
T ss_pred EEEEECCCcccccccCCCCCEEEEEEeCEEEEEEEcCCCcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEE
Confidence 678999999999999998 78899999999997521 465 899999999999999999999998776654444
No 74
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=98.90 E-value=6.2e-09 Score=102.40 Aligned_cols=97 Identities=15% Similarity=0.178 Sum_probs=74.2
Q ss_pred EeecCCCCCeeecCCceEEEeee------C----C-C-eEEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCC--eE
Q 021654 189 LVKNRELNPVEMIPGGSMKIIRE------S----P-T-SAIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKG--ER 254 (309)
Q Consensus 189 v~~~~e~~~~~~~pgg~~~il~~------~----~-~-~~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~--~~ 254 (309)
+.+..++.+.....+|.++++.. . . . ...++++||+..++|+|...|++||++|++++.+...+ ++
T Consensus 50 vf~~~~~~~~i~~e~G~i~~l~~~~~~~~~l~~~g~~s~~~~~l~Pgg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~~ 129 (445)
T 2cav_A 50 LFRSNKFLTLFKNQHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRDT 129 (445)
T ss_dssp EECGGGEEEEEEETTEEEEEECCTTSSCSTTGGGTTEEEEEEEECSSEEEEEEEESSEEEEEEEESEEEEEEEETTEEEE
T ss_pred EEchhhcCceEEcCCEEEEEEeccCcccccccccCcEEEEEEEECCCcCccCcCCCCceEEEEEeCEEEEEEEeCCCCEE
Confidence 45555554333346777777643 1 1 1 15689999999999988888889999999999764333 78
Q ss_pred EEecCCcEEEECCCCeEEEEEcC-CceEEEEE
Q 021654 255 FDLTVGDYLFTPAGDVHRVKYYE-ETEFFIKW 285 (309)
Q Consensus 255 ~~L~pGD~v~IP~g~~H~~~n~g-d~~~~i~~ 285 (309)
+.|++||++++|+|++|.+.|.+ ++++.+++
T Consensus 130 ~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~ 161 (445)
T 2cav_A 130 YKLDQGDAIKIQAGTPFYLINPDNNQNLRILK 161 (445)
T ss_dssp EEEETTEEEEECTTCCEEEEECCSSCCEEEEE
T ss_pred EEecCCCEEEECCCCcEEEEECCCCCCEEEEE
Confidence 99999999999999999999998 77876653
No 75
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.89 E-value=3.8e-09 Score=97.69 Aligned_cols=66 Identities=26% Similarity=0.356 Sum_probs=58.6
Q ss_pred EEEEEcCCCcCCC-eecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEE
Q 021654 216 AIVRFKAGSVEPA-HHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 216 ~~~~l~pG~~~p~-H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i 283 (309)
.+++++||...+. |+|...|.+|||+|++.++ .+++++.|++||++|++++.+|++.|.+++++.+
T Consensus 194 ~~~~l~pG~~i~~~~~h~~e~~~~il~G~~~~~--~~~~~~~v~~GD~~~~~~~~~h~~~n~g~~~~~y 260 (278)
T 1sq4_A 194 NIVNFEPGGVIPFAETHVMEHGLYVLEGKAVYR--LNQDWVEVEAGDFMWLRAFCPQACYSGGPGRFRY 260 (278)
T ss_dssp EEEEECSSSEESCCCCCSEEEEEEEEECEEEEE--ETTEEEEEETTCEEEEEESCCEEEECCSSSCEEE
T ss_pred EEEEECCCCCcCCCCCCCccEEEEEEeCEEEEE--ECCEEEEeCCCCEEEECCCCCEEEEcCCCCCEEE
Confidence 6789999999997 5677777799999999995 5699999999999999999999999999887643
No 76
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.89 E-value=1.1e-08 Score=95.55 Aligned_cols=98 Identities=17% Similarity=0.233 Sum_probs=70.0
Q ss_pred EEeecCCCCCeeecCCceEEEeeeCC---C--eEEEEEcC-CCcCCCeecC-CceEEEEEecEEEEEEeeCCeEEEecCC
Q 021654 188 CLVKNRELNPVEMIPGGSMKIIRESP---T--SAIVRFKA-GSVEPAHHHT-FGHDLVVLQGKKSVWNLTKGERFDLTVG 260 (309)
Q Consensus 188 ~v~~~~e~~~~~~~pgg~~~il~~~~---~--~~~~~l~p-G~~~p~H~H~-~~e~vyVlsG~l~v~i~~~~~~~~L~pG 260 (309)
.+++..+..... ..|..++.+.... . ....++.| |...++|+|+ ..|++||++|++++++ +++++.|.+|
T Consensus 188 ~v~r~~~~~~~~-~~g~~~~~l~~~~~~~~~~~~~~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i--~~~~~~l~~G 264 (337)
T 1y3t_A 188 YVLESGEGDRLL-TGDQLHRIVAAQKNTDGQFIVVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWT--DGQEIQLNPG 264 (337)
T ss_dssp EEECTTCSEEEE-ETTEEEEEEECGGGTTTSCEEEEEEECSCCCCCCEECSSCEEEEEEEESCEEEEE--TTEEEEECTT
T ss_pred EEECCCCcCEEE-ECCcEEEEEecccccCCcEEEEEEEcCCCCCCCCcCCCCCcEEEEEEeCEEEEEE--CCEEEEECCC
Confidence 345555544333 2455556554211 1 24556656 6778899999 5888999999999964 6899999999
Q ss_pred cEEEECCCCeEEEEEcCCceEEEEEcCcc
Q 021654 261 DYLFTPAGDVHRVKYYEETEFFIKWDGRW 289 (309)
Q Consensus 261 D~v~IP~g~~H~~~n~gd~~~~i~~~~~~ 289 (309)
|++++|++.+|++.|.++ ++.++|....
T Consensus 265 D~~~ip~~~~H~~~n~~~-~~~~l~v~~~ 292 (337)
T 1y3t_A 265 DFLHVPANTVHSYRLDSH-YTKMVGVLVP 292 (337)
T ss_dssp CEEEECTTCCEEEEECSS-SEEEEEEEES
T ss_pred CEEEECCCCeEEEEECCC-CeEEEEEEcC
Confidence 999999999999999987 5555554333
No 77
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.88 E-value=5.3e-09 Score=99.10 Aligned_cols=86 Identities=19% Similarity=0.280 Sum_probs=67.2
Q ss_pred cCCceEEEeeeC--CC-----eEEEEEcCCCcCCCeecC-CceEEEEEecEEEEEEee-CC--eEEEecCCcEEEECCCC
Q 021654 201 IPGGSMKIIRES--PT-----SAIVRFKAGSVEPAHHHT-FGHDLVVLQGKKSVWNLT-KG--ERFDLTVGDYLFTPAGD 269 (309)
Q Consensus 201 ~pgg~~~il~~~--~~-----~~~~~l~pG~~~p~H~H~-~~e~vyVlsG~l~v~i~~-~~--~~~~L~pGD~v~IP~g~ 269 (309)
..+|..+.+... |. ...+++.||...++|||+ ..|++||++|++++++.. ++ +.+.|++||++++|+|+
T Consensus 33 ~~~G~~~~~~~~~~p~~~~~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~g~ 112 (361)
T 2vqa_A 33 YDGGTTKQVGTYNFPVSKGMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVEIADVDKGGLWYFPRGW 112 (361)
T ss_dssp ETTEEEEEESTTTCTTCCSCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCEEEEEEETTEEEEECTTC
T ss_pred cCCceEEEeChhhCccccceeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEEEEEEcCCCEEEECCCC
Confidence 356666655322 11 257789999998999999 888899999999997632 23 57999999999999999
Q ss_pred eEEEEEcCCceEEEEEc
Q 021654 270 VHRVKYYEETEFFIKWD 286 (309)
Q Consensus 270 ~H~~~n~gd~~~~i~~~ 286 (309)
+|++.|.+++++.+++.
T Consensus 113 ~H~~~n~~~~~~~~l~v 129 (361)
T 2vqa_A 113 GHSIEGIGPDTAKFLLV 129 (361)
T ss_dssp EEEEEECSSSCEEEEEE
T ss_pred eEEEEeCCCCCEEEEEE
Confidence 99999998766655444
No 78
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=98.86 E-value=3.5e-09 Score=97.31 Aligned_cols=70 Identities=14% Similarity=0.138 Sum_probs=58.5
Q ss_pred EEEEEcCCCcCCCeec--CCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEEEEcC
Q 021654 216 AIVRFKAGSVEPAHHH--TFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWDG 287 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H--~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~~~ 287 (309)
.+++++||.....|.| ..+|++||++|+++++ .+++++.|.+||++++|++++|+++|.++.++.++|..
T Consensus 65 ~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~--~~~~~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l~v~ 136 (274)
T 1sef_A 65 YIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVS--DGQETHELEAGGYAYFTPEMKMYLANAQEADTEVFLYK 136 (274)
T ss_dssp EEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEE--CSSCEEEEETTEEEEECTTSCCEEEESSSSCEEEEEEE
T ss_pred EEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEE--ECCEEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEE
Confidence 5678999887655433 3456799999999995 46999999999999999999999999998888777665
No 79
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.82 E-value=1.9e-08 Score=95.83 Aligned_cols=91 Identities=12% Similarity=0.128 Sum_probs=65.0
Q ss_pred EEeecCCCCCeeecCCceEEEeeeC----C-CeEEEEEcCCCc-CC--CeecC-CceEEEEEecEEEEEEeeCC-----e
Q 021654 188 CLVKNRELNPVEMIPGGSMKIIRES----P-TSAIVRFKAGSV-EP--AHHHT-FGHDLVVLQGKKSVWNLTKG-----E 253 (309)
Q Consensus 188 ~v~~~~e~~~~~~~pgg~~~il~~~----~-~~~~~~l~pG~~-~p--~H~H~-~~e~vyVlsG~l~v~i~~~~-----~ 253 (309)
.+++..+...+.......++++... . ......+.|+.. .+ +|+|+ ..|.+||++|+++++++ + +
T Consensus 17 ~vvr~~e~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~--~~~g~~~ 94 (350)
T 1juh_A 17 YVIRHYSHARAVTVDTQLYRFYVTGPSSGYAFTLMGTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQ--SGNETQQ 94 (350)
T ss_dssp EEECTTCCTTCEEETTEEEEEEECHHHHTTSCEEEEEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEE--ETTSCCE
T ss_pred EEECCCCCceEEecCCceEEEEecCCCCCCcEEEEEEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEEC--CcCCceE
Confidence 4567766665543322334443221 1 123355666654 45 89998 67779999999999765 5 8
Q ss_pred EEEecCCcEEEECCCCeEEEEEcCCce
Q 021654 254 RFDLTVGDYLFTPAGDVHRVKYYEETE 280 (309)
Q Consensus 254 ~~~L~pGD~v~IP~g~~H~~~n~gd~~ 280 (309)
.+.|.+||++++|++++|+++|.++..
T Consensus 95 ~~~L~~GD~v~ip~g~~H~~~n~~~~~ 121 (350)
T 1juh_A 95 TRVLSSGDYGSVPRNVTHTFQIQDPDT 121 (350)
T ss_dssp EEEEETTCEEEECTTEEEEEEECSTTE
T ss_pred EEEECCCCEEEECCCCcEEEEeCCCCC
Confidence 999999999999999999999998765
No 80
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=98.81 E-value=1.3e-08 Score=84.27 Aligned_cols=95 Identities=14% Similarity=0.205 Sum_probs=63.7
Q ss_pred ceeEEeecCCCCCee---ecCCce--EEEeeeCC-C---eEEEEEcCCCcCCCeec-CCceEEEEEecEEEEEEeeCCeE
Q 021654 185 SICCLVKNRELNPVE---MIPGGS--MKIIRESP-T---SAIVRFKAGSVEPAHHH-TFGHDLVVLQGKKSVWNLTKGER 254 (309)
Q Consensus 185 ~~~~v~~~~e~~~~~---~~pgg~--~~il~~~~-~---~~~~~l~pG~~~p~H~H-~~~e~vyVlsG~l~v~i~~~~~~ 254 (309)
+...++|..+..+-. ..|+.. ...+.... . ..++++.|| . .|+| +..|++|||+|++++++ +++.
T Consensus 20 ~g~~vvr~~~~~~e~~~~g~p~~~~~~~~L~~~~~~~~~~~~~~~~pG-~--~~~h~~~~E~~~VLeG~~~l~~--~g~~ 94 (133)
T 2pyt_A 20 GGVKVIDGSSVKFGRFDGAEPHCVGLTDLVTEQDGSSMAAGFMQWDNA-F--FPWTLNYDEIDMVLEGELHVRH--EGET 94 (133)
T ss_dssp TSCEEECGGGCBCEECGGGTTSCCEEEEEECGGGTCSSEEEEEEEEEE-E--EEEECSSEEEEEEEEEEEEEEE--TTEE
T ss_pred CceEEEeCCccCcccccCCCCCceEEEEEEecCCCCcEEEEEEEECCC-C--ccccCCCCEEEEEEECEEEEEE--CCEE
Confidence 446677776663222 233332 22222211 1 367889999 3 3444 46777999999999954 5999
Q ss_pred EEecCCcEEEECCCCeEEEEEcCCceEEEEEc
Q 021654 255 FDLTVGDYLFTPAGDVHRVKYYEETEFFIKWD 286 (309)
Q Consensus 255 ~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~~ 286 (309)
+.|++||++++|+|.+|++.+.+ ++.++|.
T Consensus 95 ~~l~~GD~i~~p~g~~h~~~~~~--~~~~l~v 124 (133)
T 2pyt_A 95 MIAKAGDVMFIPKGSSIEFGTPT--SVRFLYV 124 (133)
T ss_dssp EEEETTCEEEECTTCEEEEEEEE--EEEEEEE
T ss_pred EEECCCcEEEECCCCEEEEEeCC--CEEEEEE
Confidence 99999999999999999999854 4444443
No 81
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=98.80 E-value=6e-09 Score=99.56 Aligned_cols=68 Identities=22% Similarity=0.339 Sum_probs=60.4
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEEE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~ 284 (309)
..+++.||...++|+|+..|++||++|+++++ .++++++.+++||++++|+|++|++.|.+++++.++
T Consensus 103 ~~~~l~PG~~~~~H~H~~~e~~yVl~G~g~~t-~v~g~~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l 170 (354)
T 2d40_A 103 GLQLIMPGEVAPSHRHNQSALRFIVEGKGAFT-AVDGERTPMNEGDFILTPQWRWHDHGNPGDEPVIWL 170 (354)
T ss_dssp EEEEECTTCEEEEEEESSCEEEEEEECSSCEE-EETTEEEECCTTCEEEECTTSCEEEECCSSSCEEEE
T ss_pred EEEEECCCCCcCCeecCcceEEEEEEEEEEEE-EECCEEEEEcCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 67889999999999999999999999999873 246899999999999999999999999988776543
No 82
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.79 E-value=2.1e-08 Score=88.13 Aligned_cols=84 Identities=17% Similarity=0.084 Sum_probs=64.4
Q ss_pred CCCeeecCCceEEEeeeCCC--eEEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEE
Q 021654 195 LNPVEMIPGGSMKIIRESPT--SAIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHR 272 (309)
Q Consensus 195 ~~~~~~~pgg~~~il~~~~~--~~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~ 272 (309)
..+....+|-+++.+..+.. ..++++.||...|.|+|+..|++|||+|.+. ++...+++||++++|+|..|+
T Consensus 105 ~~W~~~~~Gv~~~~L~~~~~~~v~l~~~~pG~~~p~H~H~g~E~~~VL~G~f~------de~~~~~~Gd~~~~p~g~~H~ 178 (195)
T 2q1z_B 105 VRWRTLGGGVRQAILPTGGEAIARLLWIPGGQAVPDHGHRGLELTLVLQGAFR------DETDRFGAGDIEIADQELEHT 178 (195)
T ss_dssp SCCEECSSSCEEEEECCSSSSEEEEEEECTTCBCCCCCCSSCEEEEEEESEEE------CSSSEEETTCEEEECSSCCCC
T ss_pred cCceecCCCeEEEEEecCCCcEEEEEEECCCCCCCCcCCCCeEEEEEEEEEEE------CCcEEECCCeEEEeCcCCccC
Confidence 34444557777777744332 3789999999999999999999999999855 344589999999999999999
Q ss_pred EEEc--CCceEEEE
Q 021654 273 VKYY--EETEFFIK 284 (309)
Q Consensus 273 ~~n~--gd~~~~i~ 284 (309)
..+. +++.+++.
T Consensus 179 p~a~~~~gc~~l~~ 192 (195)
T 2q1z_B 179 PVAERGLDCICLAA 192 (195)
T ss_dssp CEECSSSCEEEEEE
T ss_pred CEeCCCCCEEEEEE
Confidence 9994 44444433
No 83
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=98.73 E-value=4.4e-08 Score=96.06 Aligned_cols=95 Identities=16% Similarity=0.189 Sum_probs=72.1
Q ss_pred EeecCC-CCCeeecCCceEEEeee---C-------C-C-eEEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeC--Ce
Q 021654 189 LVKNRE-LNPVEMIPGGSMKIIRE---S-------P-T-SAIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTK--GE 253 (309)
Q Consensus 189 v~~~~e-~~~~~~~pgg~~~il~~---~-------~-~-~~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~--~~ 253 (309)
+.+... +.+.....+|.++++.. . . . ...+++.||+..++|+|...|++||++|++++.+... ..
T Consensus 24 ~f~~~~~~~~~~~se~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pHh~~a~Ei~yVl~G~g~v~~v~~~~~~ 103 (434)
T 2ea7_A 24 YFNSDRWFRTLYRNEWGHIRVLQRFDQRSKQMQNLENYRVVEFKSKPNTLLLPHHADADFLLVVLNGTAVLTLVNPDSRD 103 (434)
T ss_dssp EECTTTSEEEEEEETTEEEEEECCSTTTCGGGGGGTTCEEEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEE
T ss_pred EEeccccccceEEcCCEEEEEEeccCCcccccCccccEEEEEEEecCCcCccCccCCCceEEEEEecEEEEEEEeCCCCE
Confidence 334444 44444557788777532 0 1 1 2678999999999997778888999999999965323 46
Q ss_pred EEEecCCcEEEECCCCeEEEEEcC-CceEEE
Q 021654 254 RFDLTVGDYLFTPAGDVHRVKYYE-ETEFFI 283 (309)
Q Consensus 254 ~~~L~pGD~v~IP~g~~H~~~n~g-d~~~~i 283 (309)
++.|++||++++|+|.+|.+.|.+ ++++.+
T Consensus 104 ~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~~ 134 (434)
T 2ea7_A 104 SYILEQGHAQKIPAGTTFFLVNPDDNENLRI 134 (434)
T ss_dssp EEEEETTEEEEECTTCEEEEEECCSSCCEEE
T ss_pred EEEeCCCCEEEECCCccEEEEeCCCCCCeEE
Confidence 899999999999999999999998 667543
No 84
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.73 E-value=4.4e-08 Score=80.05 Aligned_cols=64 Identities=14% Similarity=0.240 Sum_probs=52.8
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~ 281 (309)
.+.+..||... +|.|...|++|||+|++++++. +++.+.|++||++++|+|.+|++.|.++..-
T Consensus 52 g~w~~~pG~~~-~~~~~~~E~~~Vl~G~~~l~~~-~g~~~~l~~GD~~~ip~g~~h~~~~~~~~rK 115 (123)
T 3bcw_A 52 GVWESTSGSFQ-SNTTGYIEYCHIIEGEARLVDP-DGTVHAVKAGDAFIMPEGYTGRWEVDRHVKK 115 (123)
T ss_dssp EEEEEEEEEEE-CCCTTEEEEEEEEEEEEEEECT-TCCEEEEETTCEEEECTTCCCEEEEEEEEEE
T ss_pred EEEEECCCcee-eEcCCCcEEEEEEEEEEEEEEC-CCeEEEECCCCEEEECCCCeEEEEECCceeE
Confidence 56778887654 5777657889999999999642 6889999999999999999999999876543
No 85
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=98.73 E-value=4.2e-08 Score=95.69 Aligned_cols=91 Identities=15% Similarity=0.205 Sum_probs=69.8
Q ss_pred cCCCCCeeecCCceEEEeee----------CC-C-eEEEEEcCCCcCCCeecCCceEEEEEecEEEEEEee--CCeEEEe
Q 021654 192 NRELNPVEMIPGGSMKIIRE----------SP-T-SAIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLT--KGERFDL 257 (309)
Q Consensus 192 ~~e~~~~~~~pgg~~~il~~----------~~-~-~~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~--~~~~~~L 257 (309)
..++.+.....+|.++++.. .. . ...+++.||+..++|+|...|++||++|++++.+.. +++++.|
T Consensus 16 ~~~~~~~~~~e~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~~~~l 95 (416)
T 1uij_A 16 SNSFQTLFENQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPHHADADFLLFVLSGRAILTLVNNDDRDSYNL 95 (416)
T ss_dssp GGSEEEEEECSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEEEESEEEEEEEEESCEEEEEECSSCEEEEEE
T ss_pred cccccceEEcCCEEEEEEeccCCccccccCcccEEEEEEEeccCcCcccccCCCceEEEEEeeEEEEEEEECCCCeEEEe
Confidence 33444444456777776522 01 1 267899999999999888888899999999996532 3578999
Q ss_pred cCCcEEEECCCCeEEEEEcC-CceEE
Q 021654 258 TVGDYLFTPAGDVHRVKYYE-ETEFF 282 (309)
Q Consensus 258 ~pGD~v~IP~g~~H~~~n~g-d~~~~ 282 (309)
++||++++|+|.+|.+.|.+ ++++.
T Consensus 96 ~~GDv~~iP~G~~H~~~N~gg~e~l~ 121 (416)
T 1uij_A 96 HPGDAQRIPAGTTYYLVNPHDHQNLK 121 (416)
T ss_dssp CTTEEEEECTTCEEEEEECCSSCCEE
T ss_pred cCCCEEEECCCCeEEEEecCCCCCEE
Confidence 99999999999999999994 77764
No 86
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.72 E-value=4.8e-08 Score=94.65 Aligned_cols=65 Identities=23% Similarity=0.255 Sum_probs=59.4
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcC-CceEE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYE-ETEFF 282 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~g-d~~~~ 282 (309)
.+.+++||...+.|.|...+.+||++|++.+. ++++++.+++||++++|++..|.+.|.+ +++++
T Consensus 297 ~~~~l~PG~~~~~HrH~~~~v~~VleG~G~~~--V~ge~~~~~~GD~~~iP~g~~H~~~N~g~~e~~~ 362 (394)
T 3bu7_A 297 SMQMLRPGEHTKAHRHTGNVIYNVAKGQGYSI--VGGKRFDWSEHDIFCVPAWTWHEHCNTQERDDAC 362 (394)
T ss_dssp EEEEECTTCBCCCEEESSCEEEEEEECCEEEE--ETTEEEEECTTCEEEECTTCCEEEEECCSSCCEE
T ss_pred EEEEECCCCcCCCcccCCcEEEEEEeCeEEEE--ECCEEEEEeCCCEEEECCCCeEEeEeCCCCCCeE
Confidence 67899999999999999999999999999884 5799999999999999999999999998 56654
No 87
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.72 E-value=7.5e-08 Score=87.16 Aligned_cols=65 Identities=25% Similarity=0.285 Sum_probs=54.5
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEEEEc
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWD 286 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~~ 286 (309)
.+++++||+..+.|. .+|++||++|+++++ .+++++.|.+||++++|++.+|+++|. .++.++|.
T Consensus 53 ~~~~l~Pg~~~~~~~--~ee~~~Vl~G~~~~~--~~~~~~~l~~Gd~~~~p~~~~H~~~n~--~~~~~l~v 117 (246)
T 1sfn_A 53 FTAEMPAGAQATESV--YQRFAFVLSGEVDVA--VGGETRTLREYDYVYLPAGEKHMLTAK--TDARVSVF 117 (246)
T ss_dssp EEEEECTTCEEECCS--SEEEEEEEEEEEEEE--CSSCEEEECTTEEEEECTTCCCEEEEE--EEEEEEEE
T ss_pred EEEEECCCCcCCCCc--eeEEEEEEECEEEEE--ECCEEEEECCCCEEEECCCCCEEEEeC--CCEEEEEE
Confidence 568999998887774 666799999999995 569999999999999999999999998 44444443
No 88
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=98.71 E-value=8.1e-08 Score=95.17 Aligned_cols=84 Identities=17% Similarity=0.225 Sum_probs=64.0
Q ss_pred CeeecCCceEEEeeeC--C-------CeEEEEEcCCCcCCCeecCC-ceEEEEEecEEEEEEeeC--CeEEE--ecCCcE
Q 021654 197 PVEMIPGGSMKIIRES--P-------TSAIVRFKAGSVEPAHHHTF-GHDLVVLQGKKSVWNLTK--GERFD--LTVGDY 262 (309)
Q Consensus 197 ~~~~~pgg~~~il~~~--~-------~~~~~~l~pG~~~p~H~H~~-~e~vyVlsG~l~v~i~~~--~~~~~--L~pGD~ 262 (309)
++....||.++.+... | ....+++.||+..++|||+. .|++||++|++++++... .+.+. |.+||+
T Consensus 313 ~~~~~~gG~v~~~~~~~~P~L~~l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv 392 (476)
T 1fxz_A 313 DIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRV 392 (476)
T ss_dssp SEEETTTEEEEEECTTTSGGGTTTTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCE
T ss_pred CcccCCCeEEEEeccccCcccccCcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCE
Confidence 3445667777765332 1 12788999999999999995 577999999999987532 24444 999999
Q ss_pred EEECCCCeEEEEEcCCceE
Q 021654 263 LFTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 263 v~IP~g~~H~~~n~gd~~~ 281 (309)
++||+|.+|...| ++..+
T Consensus 393 ~viP~G~~H~~~n-g~~~l 410 (476)
T 1fxz_A 393 LIVPQNFVVAARS-QSDNF 410 (476)
T ss_dssp EEECTTCEEEEEE-CSTTE
T ss_pred EEECCCCeEEEEe-CCCCE
Confidence 9999999999999 54443
No 89
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.70 E-value=3.7e-08 Score=94.24 Aligned_cols=79 Identities=27% Similarity=0.391 Sum_probs=63.0
Q ss_pred ecCCceEEEeeeC--CC-----eEEEEEcCCCcCCCeecCCceEEEEEecEEEEEEee-CCe--EEEecCCcEEEECCCC
Q 021654 200 MIPGGSMKIIRES--PT-----SAIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLT-KGE--RFDLTVGDYLFTPAGD 269 (309)
Q Consensus 200 ~~pgg~~~il~~~--~~-----~~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~-~~~--~~~L~pGD~v~IP~g~ 269 (309)
...+|..+.+... +. ...+++.||...++|||+..|++||++|++++++.. +++ .+.|++||++++|+|+
T Consensus 59 ~~~~G~~~~~~~~~lp~~~~~~~~~~~l~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g~~~~~~l~~GD~~~ip~g~ 138 (385)
T 1j58_A 59 LEKGGYAREVTVRELPISENLASVNMRLKPGAIRELHWHKEAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGL 138 (385)
T ss_dssp EETTEEEEEECTTTCTTCSSCEEEEEEECTTCEEEEEEESSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTC
T ss_pred ccCCcEEEEeccccCcccCceEEEEEEECCCCCCCCccCChheEEEEEeeeEEEEEEeCCCcEEEEEeCCCCEEEECCCC
Confidence 3456666654321 11 267889999999999999999999999999997642 355 6699999999999999
Q ss_pred eEEEEEcCC
Q 021654 270 VHRVKYYEE 278 (309)
Q Consensus 270 ~H~~~n~gd 278 (309)
+|++.|.++
T Consensus 139 ~H~~~n~~~ 147 (385)
T 1j58_A 139 PHSIQALEE 147 (385)
T ss_dssp CEEEEEEEE
T ss_pred eEEEEECCC
Confidence 999999874
No 90
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=98.70 E-value=1e-07 Score=95.04 Aligned_cols=84 Identities=19% Similarity=0.188 Sum_probs=64.5
Q ss_pred CeeecCCceEEEeeeC--CC-------eEEEEEcCCCcCCCeecCC-ceEEEEEecEEEEEEeeC--CeEEE--ecCCcE
Q 021654 197 PVEMIPGGSMKIIRES--PT-------SAIVRFKAGSVEPAHHHTF-GHDLVVLQGKKSVWNLTK--GERFD--LTVGDY 262 (309)
Q Consensus 197 ~~~~~pgg~~~il~~~--~~-------~~~~~l~pG~~~p~H~H~~-~e~vyVlsG~l~v~i~~~--~~~~~--L~pGD~ 262 (309)
++....||.++.+... |. ...+++.||+..++|||+. .|++||++|++++++... .+.+. |.+||+
T Consensus 347 ~~~~~~gG~v~~~~~~~fP~L~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv 426 (510)
T 3c3v_A 347 DIYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHV 426 (510)
T ss_dssp SEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCE
T ss_pred CcccCCCeEEEEeccccCcccccceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcE
Confidence 3445667777765332 21 2678999999999999995 577999999999987532 24444 999999
Q ss_pred EEECCCCeEEEEEcCCceE
Q 021654 263 LFTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 263 v~IP~g~~H~~~n~gd~~~ 281 (309)
++||+|.+|.+.| ++..+
T Consensus 427 ~viP~G~~H~~~N-g~e~l 444 (510)
T 3c3v_A 427 LVVPQNFAVAGKS-QSDNF 444 (510)
T ss_dssp EEECTTCEEEEEE-CSSEE
T ss_pred EEECCCCeEEEEe-CCCCE
Confidence 9999999999999 65544
No 91
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.67 E-value=3.5e-08 Score=94.71 Aligned_cols=66 Identities=21% Similarity=0.300 Sum_probs=60.7
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEE-EEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKS-VWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~-v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i 283 (309)
.+..+.||...+.|.|...+..||++|++. + .++++++.+++||++++|+|..|...|.+++++++
T Consensus 106 ~~~~l~PG~~~~~HrH~~~ev~~VleG~G~~~--~vdG~~~~~~~GD~v~iP~g~~H~~~N~gde~l~~ 172 (368)
T 3nw4_A 106 AIQYLGPRETAPEHRHSQNAFRFVVEGEGVWT--VVNGDPVRMSRGDLLLTPGWCFHGHMNDTDQPMAW 172 (368)
T ss_dssp EEEEECTTCEEEEEEESSCEEEECSSCEEEEE--EETTEEEEEETTCEEEECTTCCEEEEECSSSCEEE
T ss_pred EEEEECCCCccCceecccceEEEEEecceEEE--EECCEEEEEeCCCEEEECCCCcEEeEeCCCCCeEE
Confidence 677999999999999999999999999996 5 45799999999999999999999999999988764
No 92
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=98.67 E-value=1.2e-07 Score=85.07 Aligned_cols=91 Identities=25% Similarity=0.373 Sum_probs=70.5
Q ss_pred EeecCCCCCeee-cCCceEEEeeeCC-C----eEEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcE
Q 021654 189 LVKNRELNPVEM-IPGGSMKIIRESP-T----SAIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDY 262 (309)
Q Consensus 189 v~~~~e~~~~~~-~pgg~~~il~~~~-~----~~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~ 262 (309)
++...+..+... .+|-+.+.+..+. . ..+++++||...|.|.|+..|++|||+|++.- +...+++||+
T Consensus 13 ~i~~~~~~W~~~~~~Gv~~~~L~~~~~e~g~~~~lvr~~pG~~~p~H~H~g~Ee~~VL~G~f~d------~~~~~~~Gd~ 86 (223)
T 3o14_A 13 VIDTDQLEWRPSPMKGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQD------EHGDYPAGTY 86 (223)
T ss_dssp EEEGGGSCCEECSSTTEEEEEEEEESSSSCEEEEEEEECTTEECCCEECTTCEEEEEEEEEEEE------TTEEEETTEE
T ss_pred EeeCccCCceeCCCCCEEEEEeecCCCccccEEEEEEECCCCCcccccCCCCEEEEEEEeEEEE------CCeEECCCeE
Confidence 346666666655 4677777774432 2 36899999999999999999999999999764 2348889999
Q ss_pred EEECCCCeEEEEEcCCceEEEEE
Q 021654 263 LFTPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 263 v~IP~g~~H~~~n~gd~~~~i~~ 285 (309)
++.|+|..|......++.++++.
T Consensus 87 ~~~P~g~~H~p~a~~gc~~~vk~ 109 (223)
T 3o14_A 87 VRNPPTTSHVPGSAEGCTIFVKL 109 (223)
T ss_dssp EEECTTCEECCEESSCEEEEEEE
T ss_pred EEeCCCCccccEeCCCCEEEEEe
Confidence 99999999999886666666554
No 93
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.65 E-value=8.9e-08 Score=92.76 Aligned_cols=68 Identities=25% Similarity=0.401 Sum_probs=61.4
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEE-cCCceEEEE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKY-YEETEFFIK 284 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n-~gd~~~~i~ 284 (309)
.+.+++||...+.|.|...+..||++|+..+. .++++++.+++||++++|+|..|...| .++++++++
T Consensus 126 ~~~~l~PG~~~~~HrH~~~ev~~IleG~G~~t-~v~G~~~~~~~GD~i~~P~g~~H~~~N~~gde~l~~l 194 (394)
T 3bu7_A 126 GIQTMKAGERAGAHRHAASALRFIMEGSGAYT-IVDGHKVELGANDFVLTPNGTWHEHGILESGTECIWQ 194 (394)
T ss_dssp EEEEECTTCBCCCEEESSCEEEEEEECSCEEE-EETTEEEEECTTCEEEECTTCCEEEEECTTCCCEEEE
T ss_pred EEEEECCCCCcCCccCCcceEEEEEEeeEEEE-EECCEEEEEcCCCEEEECcCCCEEEEcCCCCCCEEEE
Confidence 67899999999999999999999999999763 357999999999999999999999999 998887644
No 94
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=98.63 E-value=7.2e-08 Score=95.12 Aligned_cols=69 Identities=16% Similarity=0.106 Sum_probs=60.1
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCC------------------------eEEEecCCcEEEECCCCeE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKG------------------------ERFDLTVGDYLFTPAGDVH 271 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~------------------------~~~~L~pGD~v~IP~g~~H 271 (309)
..+++.||+..++|+|+..+++||++|++.+.+...+ +.+.|++||++++|+|++|
T Consensus 66 ~r~~i~pggl~~Ph~h~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~q~~~~l~~GDv~~iPaG~~H 145 (459)
T 2e9q_A 66 IRHTIRPKGLLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRPFREGDLLVVPAGVSH 145 (459)
T ss_dssp EEEEECTTEEEEEEEESSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEECCCEEEETTEEEEECTTCCE
T ss_pred EEEEEcCCCEecceecCCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccccccceeEEecCCCEEEECCCCCE
Confidence 5689999999999999999999999999999764232 2569999999999999999
Q ss_pred EEEEcCCceEEEE
Q 021654 272 RVKYYEETEFFIK 284 (309)
Q Consensus 272 ~~~n~gd~~~~i~ 284 (309)
.+.|.+++++.++
T Consensus 146 ~~~N~g~~~l~~l 158 (459)
T 2e9q_A 146 WMYNRGQSDLVLI 158 (459)
T ss_dssp EEEECSSSCEEEE
T ss_pred EEEeCCCCCEEEE
Confidence 9999998877654
No 95
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=98.61 E-value=1.1e-07 Score=94.29 Aligned_cols=69 Identities=14% Similarity=0.207 Sum_probs=60.6
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCC-------------------------eEEEecCCcEEEECCCCe
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKG-------------------------ERFDLTVGDYLFTPAGDV 270 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~-------------------------~~~~L~pGD~v~IP~g~~ 270 (309)
..+++.||+..++|+|+..+++||++|++.+.+...+ +.+.|++||++++|+|++
T Consensus 51 ~r~~l~Pggl~~Ph~~~a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~d~~qk~~~l~~GDvi~iPaG~~ 130 (476)
T 1fxz_A 51 SRCTLNRNALRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRPQDRHQKIYNFREGDLIAVPTGVA 130 (476)
T ss_dssp EEEEECTTEEEEEEEESSCEEEEEEECCEEEEEECTTCCCC------------------CCCCEEEECTTEEEEECTTCE
T ss_pred EEEEEcCCCEecceecCCceEEEEEecEEEEEEEcCCCcchhhccccccccccccccccccceEEEEeCCCEEEECCCCc
Confidence 5789999999999999999999999999999765321 378999999999999999
Q ss_pred EEEEEcCCceEEEE
Q 021654 271 HRVKYYEETEFFIK 284 (309)
Q Consensus 271 H~~~n~gd~~~~i~ 284 (309)
|.+.|.+++++.++
T Consensus 131 h~~~N~G~~~l~~i 144 (476)
T 1fxz_A 131 WWMYNNEDTPVVAV 144 (476)
T ss_dssp EEEEECSSSCEEEE
T ss_pred EEEEeCCCCCEEEE
Confidence 99999998877553
No 96
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.60 E-value=2.2e-07 Score=79.97 Aligned_cols=63 Identities=21% Similarity=0.207 Sum_probs=52.6
Q ss_pred EcCCCcCCCeecCCceEEEEEecEEEEEEeeCC--eEEEecCCcEEEECCCCeEEEEEcC-CceEE
Q 021654 220 FKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKG--ERFDLTVGDYLFTPAGDVHRVKYYE-ETEFF 282 (309)
Q Consensus 220 l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~--~~~~L~pGD~v~IP~g~~H~~~n~g-d~~~~ 282 (309)
-.|++...+|.|+.+|++||++|.+.+.+..++ +...|++||.+.+|+|++|+....+ ++..+
T Consensus 42 ~Gpn~r~d~H~h~~dE~FyvlkG~m~i~v~d~g~~~~v~l~eGE~f~lP~gvpH~P~r~~~e~~~l 107 (174)
T 1yfu_A 42 GGPNHRTDYHDDPLEEFFYQLRGNAYLNLWVDGRRERADLKEGDIFLLPPHVRHSPQRPEAGSACL 107 (174)
T ss_dssp CSCBCCCCEEECSSCEEEEEEESCEEEEEEETTEEEEEEECTTCEEEECTTCCEEEEBCCTTCEEE
T ss_pred cCCCcCccCcCCCCceEEEEEeeEEEEEEEcCCceeeEEECCCCEEEeCCCCCcCccccCCCCEEE
Confidence 346778999999999999999999999876433 5899999999999999999997766 54443
No 97
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=98.59 E-value=1.7e-07 Score=89.47 Aligned_cols=61 Identities=15% Similarity=0.136 Sum_probs=56.4
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCC
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEE 278 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd 278 (309)
.+.+++||...++|+|+..+.+||++|++++++ +++++.+.+||.++||++..|++.|.++
T Consensus 271 ~~~~l~pG~~~~~H~h~~~ev~~v~~G~g~~~v--~~~~~~~~~GD~~~vP~~~~H~~~n~e~ 331 (354)
T 2d40_A 271 FLQLLPKGFASRVARTTDSTIYHVVEGSGQVII--GNETFSFSAKDIFVVPTWHGVSFQTTQD 331 (354)
T ss_dssp EEEEECTTCBCCCBEESSCEEEEEEEEEEEEEE--TTEEEEEETTCEEEECTTCCEEEEEEEE
T ss_pred EEEEECCCCCCCceecCCcEEEEEEeCeEEEEE--CCEEEEEcCCCEEEECCCCeEEEEeCCC
Confidence 678999999999999999999999999999965 6899999999999999999999999543
No 98
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=98.58 E-value=2.5e-07 Score=92.03 Aligned_cols=81 Identities=17% Similarity=0.149 Sum_probs=62.4
Q ss_pred CeeecCCceEEEeeeC--CC-------eEEEEEcCCCcCCCeecCC-ceEEEEEecEEEEEEeeC--CeE--EEecCCcE
Q 021654 197 PVEMIPGGSMKIIRES--PT-------SAIVRFKAGSVEPAHHHTF-GHDLVVLQGKKSVWNLTK--GER--FDLTVGDY 262 (309)
Q Consensus 197 ~~~~~pgg~~~il~~~--~~-------~~~~~l~pG~~~p~H~H~~-~e~vyVlsG~l~v~i~~~--~~~--~~L~pGD~ 262 (309)
++....||.++.+... |. ...+++.||+..++|||+. .|++||++|++++++... .+. ..|.+||+
T Consensus 342 ~~~~~~gG~v~~~~~~~~P~L~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv 421 (493)
T 2d5f_A 342 DFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQL 421 (493)
T ss_dssp SEEETTTEEEEEESTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCE
T ss_pred CcccCCCeEEEEeccccCccccccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCE
Confidence 3444567777766432 21 2678999999999999995 577999999999987532 233 35999999
Q ss_pred EEECCCCeEEEEEcC
Q 021654 263 LFTPAGDVHRVKYYE 277 (309)
Q Consensus 263 v~IP~g~~H~~~n~g 277 (309)
++||+|.+|...|.+
T Consensus 422 ~vvP~G~~H~~~n~~ 436 (493)
T 2d5f_A 422 LVVPQNFVVAEQGGE 436 (493)
T ss_dssp EEECTTCEEEEEEEE
T ss_pred EEECCCCeEeeeeCC
Confidence 999999999999854
No 99
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=98.57 E-value=1.6e-07 Score=93.39 Aligned_cols=69 Identities=13% Similarity=0.115 Sum_probs=60.8
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeC----------------------------CeEEEecCCcEEEECC
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTK----------------------------GERFDLTVGDYLFTPA 267 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~----------------------------~~~~~L~pGD~v~IP~ 267 (309)
..+++.||+..++|+|+..+++||++|++.+.+... .+.+.|.+||+++||+
T Consensus 48 ~r~~i~pggl~~Ph~~~~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~~~~~d~~qkv~~l~~GDvi~iPa 127 (493)
T 2d5f_A 48 SKRTLNRNGLHLPSYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQQLQDSHQKIRHFNEGDVLVIPP 127 (493)
T ss_dssp EEEEECTTEEEEEEECSSCEEEEEEECEEEEEECCTTCCCCEEECC-------------CSEEESCEEEEETTEEEEECT
T ss_pred EEEEeCCCcEeCceecCCCeEEEEEeCEEEEEEEeCCCccccccccccccccccccccccccccceEEEecCCCEEEECC
Confidence 678999999999999999999999999999976421 1478999999999999
Q ss_pred CCeEEEEEcCCceEEEE
Q 021654 268 GDVHRVKYYEETEFFIK 284 (309)
Q Consensus 268 g~~H~~~n~gd~~~~i~ 284 (309)
|++|.+.|.+++++.++
T Consensus 128 G~~h~~~N~g~~~l~~v 144 (493)
T 2d5f_A 128 GVPYWTYNTGDEPVVAI 144 (493)
T ss_dssp TCCEEEEECSSSCEEEE
T ss_pred CCcEEEEeCCCCCEEEE
Confidence 99999999998887654
No 100
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=98.52 E-value=2.1e-07 Score=91.77 Aligned_cols=84 Identities=14% Similarity=0.099 Sum_probs=67.5
Q ss_pred cCCceEEEeeeCCC--------eEEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCC--e-----------------
Q 021654 201 IPGGSMKIIRESPT--------SAIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKG--E----------------- 253 (309)
Q Consensus 201 ~pgg~~~il~~~~~--------~~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~--~----------------- 253 (309)
..+|.++++..... ...+++.||+..++|+|...+++||++|++.+.+...+ +
T Consensus 30 se~G~~e~~d~~~~~l~~~gvs~~R~~i~P~gl~~Ph~h~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~~~ 109 (465)
T 3qac_A 30 AERGLTEVWDSNEQEFRCAGVSVIRRTIEPHGLLLPSFTSAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDERI 109 (465)
T ss_dssp ETTEEEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEEECTTCCCCC---------------
T ss_pred CCCcEEEEECCCChhhcccceEEEEEEEcCCcCcccEEcCCCEEEEEEECcEEEEEecCCCCceeecchhcccccccccc
Confidence 35667776643321 15789999999999999999999999999999754332 2
Q ss_pred ---------------------EEEecCCcEEEECCCCeEEEEEcCCceEEEE
Q 021654 254 ---------------------RFDLTVGDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 254 ---------------------~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~ 284 (309)
...+++||++++|+|+.|.+.|.+++++.++
T Consensus 110 ~~~~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v 161 (465)
T 3qac_A 110 REQGSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAV 161 (465)
T ss_dssp ---------------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEE
T ss_pred ccccccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEE
Confidence 4589999999999999999999999887654
No 101
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.50 E-value=6.2e-07 Score=78.68 Aligned_cols=66 Identities=23% Similarity=0.235 Sum_probs=52.7
Q ss_pred EEEEEcCCC----------cCCCeecCCceEEEEEecEEEEEEeeC-Ce--EEEecCCcEEEECCCCeEEEEEcCCceE
Q 021654 216 AIVRFKAGS----------VEPAHHHTFGHDLVVLQGKKSVWNLTK-GE--RFDLTVGDYLFTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 216 ~~~~l~pG~----------~~p~H~H~~~e~vyVlsG~l~v~i~~~-~~--~~~L~pGD~v~IP~g~~H~~~n~gd~~~ 281 (309)
-++++.++. ..++|.|+..|.+||++|++.+.+..+ ++ ...+++||.++||+|++|++.+..+..+
T Consensus 77 D~v~~~p~~~p~~~~k~~~~~~~H~H~~~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~~~~ 155 (191)
T 1vr3_A 77 DIITICKDTLPNYEEKIKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKNYV 155 (191)
T ss_dssp EEEEESTTTSTTHHHHHHHHHSCEECSSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTTCCE
T ss_pred eEEEECCCcCcchhhhhccCCcceECCcceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCCCCE
Confidence 345666664 248999999999999999999977532 33 4599999999999999999998776544
No 102
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.49 E-value=4.1e-07 Score=86.52 Aligned_cols=68 Identities=15% Similarity=0.102 Sum_probs=56.5
Q ss_pred EEEEcC---CCcCCCeecCCceEEEEEecEEEEEEeeCC-eEEEecCCcEEEECCCCeEEEEEcCCceEEEEEc
Q 021654 217 IVRFKA---GSVEPAHHHTFGHDLVVLQGKKSVWNLTKG-ERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWD 286 (309)
Q Consensus 217 ~~~l~p---G~~~p~H~H~~~e~vyVlsG~l~v~i~~~~-~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~~ 286 (309)
.+++++ |...+.|.|+..+.+|||+|++++++ ++ +.+.|++||+++||+|.+|++.+.++...++++.
T Consensus 253 ~i~~~~~~~g~~~~~h~~~~~~~~~vleG~~~i~i--~g~~~~~l~~Gd~~~iPag~~h~~~~~~~~~~~l~~~ 324 (350)
T 1juh_A 253 TISMSTTPSTVTVPTWSFPGACAFQVQEGRVVVQI--GDYAATELGSGDVAFIPGGVEFKYYSEAYFSKVLFVS 324 (350)
T ss_dssp EEEECCCCTTSCCCCBCCSSCEEEEEEESCEEEEE--TTSCCEEECTTCEEEECTTCCEEEEESSSSEEEEEEE
T ss_pred EEeeccccCCCCCCcccCCCcEEEEEEeeEEEEEE--CCeEEEEeCCCCEEEECCCCCEEEEecCCeEEEEEEe
Confidence 445555 55789999999999999999999965 47 8999999999999999999999988755544443
No 103
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=98.48 E-value=3.1e-07 Score=89.10 Aligned_cols=96 Identities=14% Similarity=0.123 Sum_probs=74.5
Q ss_pred EeecCC-CCCeeecCCceEEEe---eeC-------C-C-eEEEEEcCCCcCCCeecCCceEEEEEecEEEEEEee--CCe
Q 021654 189 LVKNRE-LNPVEMIPGGSMKII---RES-------P-T-SAIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLT--KGE 253 (309)
Q Consensus 189 v~~~~e-~~~~~~~pgg~~~il---~~~-------~-~-~~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~--~~~ 253 (309)
+.+... +.+..-..+|.++.+ ... . . ...+++.||+..++|||+..+++||++|++++.+.. +..
T Consensus 15 ~f~~~~~~~~~~~~e~G~i~~l~~~~~~~~~l~~~~~~s~~~~~l~pgg~~~ph~~~a~ei~yVl~G~~~v~~v~~~~~~ 94 (397)
T 2phl_A 15 YFNSDNSWNTLFKNQYGHIRVLQRFDQQSKRLQNLEDYRLVEFRSKPETLLLPQQADAELLLVVRSGSAILVLVKPDDRR 94 (397)
T ss_dssp EECGGGTEEEEEEETTEEEEEECCHHHHCGGGGGGTTCEEEEEEECSSEEEEEEEESEEEEEEEEESEEEEEEEETTTEE
T ss_pred EeccchhccceEEcCCEEEEEecccCCCChhhcccccEEEEEEEECCCcCccCEecCCCeEEEEEeeeEEEEEEeCCCcE
Confidence 445555 655555677888875 221 1 1 267899999999999999999999999999997531 346
Q ss_pred EEEecCCcE------EEECCCCeEEEEEcC-CceEEEE
Q 021654 254 RFDLTVGDY------LFTPAGDVHRVKYYE-ETEFFIK 284 (309)
Q Consensus 254 ~~~L~pGD~------v~IP~g~~H~~~n~g-d~~~~i~ 284 (309)
++.|++||. +++|+|++|.+.|.+ ++++.++
T Consensus 95 ~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l~~i 132 (397)
T 2phl_A 95 EYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKEDLRII 132 (397)
T ss_dssp EEEEEESSCTTSCSEEEECTTCEEEEEECCSSCCEEEE
T ss_pred EEEECCCCcccccceEEECCCCcEEEEeCCCCCCeEEE
Confidence 899999999 999999999999998 6666543
No 104
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=98.47 E-value=3.5e-07 Score=91.16 Aligned_cols=69 Identities=12% Similarity=0.194 Sum_probs=60.4
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCC--------------------------------------eEEEe
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKG--------------------------------------ERFDL 257 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~--------------------------------------~~~~L 257 (309)
..+++.||+..++|+|+..+++||++|++.+.+...+ +.+.|
T Consensus 51 ~r~~i~p~gl~lPh~~~a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~qkv~~v 130 (510)
T 3c3v_A 51 SRLVLRRNALRRPFYSNAPQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRPPRRLQEEDQSQQQQDSHQKVHRF 130 (510)
T ss_dssp EEEEECTTEEEEEEECSSCEEEEEEECCEEEEEECTTCCCCEEEECCC--------------------CEEEEESCCEEE
T ss_pred EEEEECCCCCccceecCCCeEEEEEeCEEEEEEEeCCCccccccccccccccccccccccccccccccccccccceEEEe
Confidence 6789999999999999999999999999999765422 24789
Q ss_pred cCCcEEEECCCCeEEEEEcCCceEEEE
Q 021654 258 TVGDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 258 ~pGD~v~IP~g~~H~~~n~gd~~~~i~ 284 (309)
.+||+++||+|++|++.|.+++++.++
T Consensus 131 ~~GDvi~iPaG~~hw~~N~g~~~l~~v 157 (510)
T 3c3v_A 131 NEGDLIAVPTGVAFWLYNDHDTDVVAV 157 (510)
T ss_dssp CTTEEEEECTTCEEEEEECSSSCEEEE
T ss_pred cCCCEEEECCCCCEEEEeCCCCCEEEE
Confidence 999999999999999999998887653
No 105
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=98.47 E-value=8e-07 Score=87.67 Aligned_cols=85 Identities=16% Similarity=0.179 Sum_probs=65.3
Q ss_pred CCeeecCCceEEEeeeC--CC-------eEEEEEcCCCcCCCeecCCc-eEEEEEecEEEEEEeeC--CeEEE--ecCCc
Q 021654 196 NPVEMIPGGSMKIIRES--PT-------SAIVRFKAGSVEPAHHHTFG-HDLVVLQGKKSVWNLTK--GERFD--LTVGD 261 (309)
Q Consensus 196 ~~~~~~pgg~~~il~~~--~~-------~~~~~l~pG~~~p~H~H~~~-e~vyVlsG~l~v~i~~~--~~~~~--L~pGD 261 (309)
.+.....||.++.+... |. ...+.+.||+..++|||+.. |++||++|++++.+... .+.+. |.+||
T Consensus 296 ~~~~~~~gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GD 375 (459)
T 2e9q_A 296 ADVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQ 375 (459)
T ss_dssp CSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTC
T ss_pred CCcccCCCeeEEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCc
Confidence 34445667777766432 22 26789999999999999965 67999999999987532 35554 99999
Q ss_pred EEEECCCCeEEEEEcCCceE
Q 021654 262 YLFTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 262 ~v~IP~g~~H~~~n~gd~~~ 281 (309)
+++||+|.+|...| ++..+
T Consensus 376 v~v~P~G~~H~~~n-g~~~~ 394 (459)
T 2e9q_A 376 VLMIPQNFVVIKRA-SDRGF 394 (459)
T ss_dssp EEEECTTCEEEEEE-EEEEE
T ss_pred EEEECCCCEEEEEe-CCCCe
Confidence 99999999999999 54444
No 106
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=98.46 E-value=1.1e-06 Score=87.74 Aligned_cols=89 Identities=10% Similarity=0.134 Sum_probs=64.7
Q ss_pred CeeecCCceEEEeeeC--CC-------eEEEEEcCCCcCCCeecCC-ceEEEEEecEEEEEEeeCC--e--EEEecCCcE
Q 021654 197 PVEMIPGGSMKIIRES--PT-------SAIVRFKAGSVEPAHHHTF-GHDLVVLQGKKSVWNLTKG--E--RFDLTVGDY 262 (309)
Q Consensus 197 ~~~~~pgg~~~il~~~--~~-------~~~~~l~pG~~~p~H~H~~-~e~vyVlsG~l~v~i~~~~--~--~~~L~pGD~ 262 (309)
++.-..||.++.+... |. ...+++.||+..++|||+. .|++||++|++++.+.... . +..|.+||+
T Consensus 369 d~~n~~GG~v~~a~~~~fP~L~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV 448 (531)
T 3fz3_A 369 DIFSPRAGRISTLNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQL 448 (531)
T ss_dssp SEEETTTEEEEEESTTTCTHHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCE
T ss_pred CcccCCCeEEEEeccccCCccccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeE
Confidence 3444557777765332 21 2678999999999999996 6779999999999875332 2 578999999
Q ss_pred EEECCCCeEEEEEcCCceEEEEE
Q 021654 263 LFTPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 263 v~IP~g~~H~~~n~gd~~~~i~~ 285 (309)
++||+|.+|...+..+.-.++.|
T Consensus 449 ~v~P~G~~H~~~ag~e~l~flaF 471 (531)
T 3fz3_A 449 FIVPQNHGVIQQAGNQGFEYFAF 471 (531)
T ss_dssp EEECTTCEEEEEEEEEEEEEEEE
T ss_pred EEECCCCeEEEecCCCCEEEEEE
Confidence 99999999976644233334445
No 107
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.45 E-value=7.7e-07 Score=76.55 Aligned_cols=63 Identities=11% Similarity=0.048 Sum_probs=52.6
Q ss_pred cCCCcCCCeecCCceEEEEEecEEEEEEeeCC------eEEEecCCcEEEECCCCeEEEEEcCCceEEE
Q 021654 221 KAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKG------ERFDLTVGDYLFTPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 221 ~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~------~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i 283 (309)
.|+....+|+|+.+|++|+++|.+.+.+..++ +...|++||.+.+|+|++|+-....++..++
T Consensus 42 GPn~r~D~H~~~~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~~e~v~lv 110 (176)
T 1zvf_A 42 GPNERTDYHINPTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSPVRFADTVGIV 110 (176)
T ss_dssp SSBCCSCEEECSSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEEEECTTCEEEE
T ss_pred CCCcCCcCcCCCCceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCCcccCCcEEEE
Confidence 35577999999999999999999999876534 4899999999999999999996666555443
No 108
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.42 E-value=1.9e-06 Score=74.58 Aligned_cols=60 Identities=22% Similarity=0.295 Sum_probs=50.8
Q ss_pred EEEEEcCCCcCCCeecCC------ceE-EEEEecEEEEEEeeCCeE---------------------EEecCCcEEEECC
Q 021654 216 AIVRFKAGSVEPAHHHTF------GHD-LVVLQGKKSVWNLTKGER---------------------FDLTVGDYLFTPA 267 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~------~e~-vyVlsG~l~v~i~~~~~~---------------------~~L~pGD~v~IP~ 267 (309)
.++.+.||+..|.|.|+. .++ ++|++|.+++++. ++. ..|+|||++.|||
T Consensus 56 K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~--g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIpp 133 (175)
T 2y0o_A 56 KELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVE--GEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIPP 133 (175)
T ss_dssp EEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEES--SSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEECT
T ss_pred EEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEEC--CccccCcceeccCCceeeecCCcEEEECCCCEEEECC
Confidence 567889999999999997 444 7799999999763 433 5999999999999
Q ss_pred CCeEEEEEcC
Q 021654 268 GDVHRVKYYE 277 (309)
Q Consensus 268 g~~H~~~n~g 277 (309)
|++|++++..
T Consensus 134 g~~H~f~age 143 (175)
T 2y0o_A 134 NTKHWFQAGE 143 (175)
T ss_dssp TCCEEEEEEE
T ss_pred CCcEEEEeCC
Confidence 9999999943
No 109
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=98.39 E-value=2.2e-06 Score=83.12 Aligned_cols=86 Identities=17% Similarity=0.120 Sum_probs=65.8
Q ss_pred CeeecCCceEEEeeeCCC---eEEEEEcCCCcCCCeecCCc-eEEEEEecEEEEEEeeC-------Ce---EEEecCCcE
Q 021654 197 PVEMIPGGSMKIIRESPT---SAIVRFKAGSVEPAHHHTFG-HDLVVLQGKKSVWNLTK-------GE---RFDLTVGDY 262 (309)
Q Consensus 197 ~~~~~pgg~~~il~~~~~---~~~~~l~pG~~~p~H~H~~~-e~vyVlsG~l~v~i~~~-------~~---~~~L~pGD~ 262 (309)
+....++|+.+.+..... ...+.+.||+..++|||+.. |++||++|++++.+... +. +..|++||.
T Consensus 220 p~~~n~~G~~~~v~~~~l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~GDV 299 (397)
T 2phl_A 220 NTIGNEFGNLTERTDNSLNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKDDV 299 (397)
T ss_dssp CEEEETTEEEEEEEETTTTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETTCE
T ss_pred CcccCCCCeEEEEeeccCCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecCCCE
Confidence 344456677665543322 26789999999999999965 55999999999987643 21 578999999
Q ss_pred EEECCCCeEEEEEcCCceEE
Q 021654 263 LFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 263 v~IP~g~~H~~~n~gd~~~~ 282 (309)
++||+|.+|...|.++..++
T Consensus 300 ~vvP~G~~h~~~n~~~l~~l 319 (397)
T 2phl_A 300 FVIPAAYPVAIKATSNVNFT 319 (397)
T ss_dssp EEECTTCCEEEEESSSEEEE
T ss_pred EEECCCCeEEEEeCCCeEEE
Confidence 99999999999999855543
No 110
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.39 E-value=1.7e-06 Score=71.40 Aligned_cols=49 Identities=20% Similarity=0.227 Sum_probs=44.8
Q ss_pred CCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcC
Q 021654 227 PAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYE 277 (309)
Q Consensus 227 p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~g 277 (309)
.+|.|+..+++||++|++++. ++++++.+++||.+++|||++|++.+.+
T Consensus 32 ~p~~h~~~~i~~v~~G~~~~~--i~~~~~~l~~Gd~~~i~p~~~H~~~~~~ 80 (164)
T 2arc_A 32 RPLGMKGYILNLTIRGQGVVK--NQGREFVCRPGDILLFPPGEIHHYGRHP 80 (164)
T ss_dssp ETTCCSSEEEEEEEEECEEEE--ETTEEEEECTTCEEEECTTCCEEEEECT
T ss_pred cccCCCceEEEEEEEeEEEEE--ECCEEEEecCCeEEEEcCCCCEEEEeCC
Confidence 378899999999999999995 4699999999999999999999999875
No 111
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=98.36 E-value=2.6e-06 Score=83.07 Aligned_cols=89 Identities=19% Similarity=0.222 Sum_probs=67.0
Q ss_pred CCCCeeecCCceEEEeeeCCC---------eEEEEEcCCCcCCCeecCCc-eEEEEEecEEEEEEeeCC-----------
Q 021654 194 ELNPVEMIPGGSMKIIRESPT---------SAIVRFKAGSVEPAHHHTFG-HDLVVLQGKKSVWNLTKG----------- 252 (309)
Q Consensus 194 e~~~~~~~pgg~~~il~~~~~---------~~~~~l~pG~~~p~H~H~~~-e~vyVlsG~l~v~i~~~~----------- 252 (309)
+..+....++|+++.+....- ...+.+.||+..++|||+.. |++||++|++++++...+
T Consensus 221 ~~~p~~~~~~G~~~~~~~~~~P~L~~l~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~ 300 (416)
T 1uij_A 221 SRNPIYSNNFGKFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIKEQQQKQKQEEE 300 (416)
T ss_dssp SSCCSEECSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC-----------
T ss_pred ccCCCccCCCceEEEEChHHCccchhcCcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCCCcccccccccc
Confidence 444555566777665533221 15789999999999999965 559999999999775332
Q ss_pred ----eEE--EecCCcEEEECCCCeEEEEEcCCceEE
Q 021654 253 ----ERF--DLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 253 ----~~~--~L~pGD~v~IP~g~~H~~~n~gd~~~~ 282 (309)
+.+ .|.+||.++||+|.+|...|.++..++
T Consensus 301 ~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~~~~~~l 336 (416)
T 1uij_A 301 PLEVQRYRAELSEDDVFVIPAAYPFVVNATSNLNFL 336 (416)
T ss_dssp -CCEEEEEEEEETTCEEEECTTCCEEEEESSSEEEE
T ss_pred ccceEEEEEEecCCcEEEECCCCeEEEEcCCCeEEE
Confidence 356 899999999999999999999554443
No 112
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.34 E-value=2.2e-07 Score=80.82 Aligned_cols=53 Identities=17% Similarity=0.056 Sum_probs=45.6
Q ss_pred CCCeecCCceEEEEEecEEEEEEeeCCeE--EEecCCcEEEECCCCeEEEEEcCC
Q 021654 226 EPAHHHTFGHDLVVLQGKKSVWNLTKGER--FDLTVGDYLFTPAGDVHRVKYYEE 278 (309)
Q Consensus 226 ~p~H~H~~~e~vyVlsG~l~v~i~~~~~~--~~L~pGD~v~IP~g~~H~~~n~gd 278 (309)
.++|.|+..|..||++|++.+.+..+++. ..+++||.++||+|++|++.+.++
T Consensus 93 ~~~H~H~~~Ei~~Vl~G~g~~~i~~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~ 147 (179)
T 1zrr_A 93 LNEHTHGEDEVRFFVEGAGLFCLHIGDEVFQVLCEKNDLISVPAHTPHWFDMGSE 147 (179)
T ss_dssp HSCBEESSCEEEEEEESCCCCCEECSSCEEEEECCCSCEEEECTTCCBCCCCSSC
T ss_pred ccceECChheEEEEEcceEEEEEEeCCEEEEEEECCCCEEEECCCCeEeeecCCC
Confidence 57999999999999999999965435665 559999999999999999988665
No 113
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=98.34 E-value=4.9e-06 Score=82.64 Aligned_cols=82 Identities=15% Similarity=0.168 Sum_probs=63.1
Q ss_pred CCeeecCCceEEEeeeC--CC-------eEEEEEcCCCcCCCeecCCc-eEEEEEecEEEEEEeeC--CeEE--EecCCc
Q 021654 196 NPVEMIPGGSMKIIRES--PT-------SAIVRFKAGSVEPAHHHTFG-HDLVVLQGKKSVWNLTK--GERF--DLTVGD 261 (309)
Q Consensus 196 ~~~~~~pgg~~~il~~~--~~-------~~~~~l~pG~~~p~H~H~~~-e~vyVlsG~l~v~i~~~--~~~~--~L~pGD 261 (309)
.++....||.++.+... |. ...+.+.||+..++|||+.. |++||++|++++.+... .+.+ .|.+||
T Consensus 332 ~di~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GD 411 (496)
T 3ksc_A 332 PDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGR 411 (496)
T ss_dssp CSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTC
T ss_pred CCcccCCCeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecCCe
Confidence 34555568887766432 22 26789999999999999865 66999999999987543 2444 499999
Q ss_pred EEEECCCCeEEEEEcC
Q 021654 262 YLFTPAGDVHRVKYYE 277 (309)
Q Consensus 262 ~v~IP~g~~H~~~n~g 277 (309)
+++||.|.+|...|.+
T Consensus 412 V~v~P~G~~H~~~a~~ 427 (496)
T 3ksc_A 412 ALTVPQNYAVAAKSLS 427 (496)
T ss_dssp EEEECTTCEEEEEECS
T ss_pred EEEECCCCEEEEEeCC
Confidence 9999999999887764
No 114
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=98.33 E-value=2.6e-06 Score=83.42 Aligned_cols=88 Identities=16% Similarity=0.194 Sum_probs=66.5
Q ss_pred CCCCeeecCCceEEEeeeCCC---------eEEEEEcCCCcCCCeecCCc-eEEEEEecEEEEEEeeCC-----------
Q 021654 194 ELNPVEMIPGGSMKIIRESPT---------SAIVRFKAGSVEPAHHHTFG-HDLVVLQGKKSVWNLTKG----------- 252 (309)
Q Consensus 194 e~~~~~~~pgg~~~il~~~~~---------~~~~~l~pG~~~p~H~H~~~-e~vyVlsG~l~v~i~~~~----------- 252 (309)
+-.+.....+|.++.+..... ...+.+.||+..++|||+.. |++||++|++++++...+
T Consensus 238 ~~~p~~~~~gG~v~~~~~~~~P~L~~l~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~ 317 (434)
T 2ea7_A 238 NSKPIYSNKFGRWYEMTPEKNPQLKDLDVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEES 317 (434)
T ss_dssp SSCCSEEETTEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCC
T ss_pred cCCCceeCCCcEEEEEChhhCccccccCcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEecCccccccccccC
Confidence 444554567777766533211 15789999999999999965 559999999999775332
Q ss_pred ---eEE--EecCCcEEEECCCCeEEEEEcCCceE
Q 021654 253 ---ERF--DLTVGDYLFTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 253 ---~~~--~L~pGD~v~IP~g~~H~~~n~gd~~~ 281 (309)
+.+ .|.+||.++||+|.+|...|.++..+
T Consensus 318 ~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~~~~~~ 351 (434)
T 2ea7_A 318 LEVQRYRAELSEDDVFVIPAAYPVAINATSNLNF 351 (434)
T ss_dssp EEEEEEEEEECTTCEEEECTTCCEEEEESSSEEE
T ss_pred cceEEEEEEecCCcEEEECCCCeEEEEcCCCeEE
Confidence 156 89999999999999999999955443
No 115
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=98.31 E-value=1.3e-06 Score=86.74 Aligned_cols=70 Identities=14% Similarity=0.147 Sum_probs=60.6
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCC--e----------------------EEEecCCcEEEECCCCeE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKG--E----------------------RFDLTVGDYLFTPAGDVH 271 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~--~----------------------~~~L~pGD~v~IP~g~~H 271 (309)
..+++.||+..++|+|...+++||++|++.+.+...+ + .+.|++||++.||+|++|
T Consensus 49 ~R~~i~pggl~lPh~~~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~viPaG~~h 128 (496)
T 3ksc_A 49 SRATLQRNALRRPYYSNAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRHQKVNRFREGDIIAVPTGIVF 128 (496)
T ss_dssp EEEEECTTEEEEEEEESSCEEEEEEECCEEEEEECTTCCCC---------------CCCCCCEEEECTTEEEEECTTCEE
T ss_pred EEEEecCCCEeCceEcCCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccccccchheeeccCCCCEEEECCCCcE
Confidence 6789999999999999989999999999999764332 3 359999999999999999
Q ss_pred EEEEcCCceEEEEE
Q 021654 272 RVKYYEETEFFIKW 285 (309)
Q Consensus 272 ~~~n~gd~~~~i~~ 285 (309)
.+.|.++.+++++.
T Consensus 129 ~~~N~G~~~lv~v~ 142 (496)
T 3ksc_A 129 WMYNDQDTPVIAVS 142 (496)
T ss_dssp EEEECSSSCEEEEE
T ss_pred EEEcCCCCCEEEEE
Confidence 99999998887654
No 116
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=98.31 E-value=2.8e-06 Score=83.86 Aligned_cols=83 Identities=16% Similarity=0.155 Sum_probs=62.5
Q ss_pred eeecCCceEEEeeeC--CC-------eEEEEEcCCCcCCCeecCCc-eEEEEEecEEEEEEeeC--CeEE--EecCCcEE
Q 021654 198 VEMIPGGSMKIIRES--PT-------SAIVRFKAGSVEPAHHHTFG-HDLVVLQGKKSVWNLTK--GERF--DLTVGDYL 263 (309)
Q Consensus 198 ~~~~pgg~~~il~~~--~~-------~~~~~l~pG~~~p~H~H~~~-e~vyVlsG~l~v~i~~~--~~~~--~L~pGD~v 263 (309)
+....||+++.+... |. ...+.+.||+..++|||+.. |++||++|++++.+... .+.+ .|.+||.+
T Consensus 299 ~~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~ 378 (466)
T 3kgl_A 299 VYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLL 378 (466)
T ss_dssp EEETTTEEEEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEE
T ss_pred cccCCCceEEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEE
Confidence 444557777765432 22 26789999999999999765 67999999999987543 2334 59999999
Q ss_pred EECCCCeEEEEEcCCceE
Q 021654 264 FTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 264 ~IP~g~~H~~~n~gd~~~ 281 (309)
+||.|.+|.. +.+++.+
T Consensus 379 v~P~G~~H~~-~ag~e~~ 395 (466)
T 3kgl_A 379 SIPQGFSVVK-RATSEQF 395 (466)
T ss_dssp EECTTCEEEE-EECSSEE
T ss_pred EECCCCeEEE-EcCCCCE
Confidence 9999999987 5565544
No 117
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.24 E-value=5.7e-06 Score=79.35 Aligned_cols=65 Identities=20% Similarity=0.304 Sum_probs=58.9
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~ 282 (309)
....+.||...+.|.|...+.++|++|++++. ++++++.+.+||.+++|++.+|+..|.++..++
T Consensus 282 ~~~~L~pG~~t~~hRht~s~Vy~V~eG~G~~~--I~~~~~~w~~gD~fvvP~w~~h~~~n~~~a~Lf 346 (368)
T 3nw4_A 282 EFHRLRAGTETATRNEVGSTVFQVFEGAGAVV--MNGETTKLEKGDMFVVPSWVPWSLQAETQFDLF 346 (368)
T ss_dssp EEEEECTTCBCCCEEESSCEEEEEEESCEEEE--ETTEEEEECTTCEEEECTTCCEEEEESSSEEEE
T ss_pred heEEECCCCccCCeeccccEEEEEEeCcEEEE--ECCEEEEecCCCEEEECCCCcEEEEeCCCEEEE
Confidence 56789999999999999999999999999995 469999999999999999999999998665554
No 118
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=98.18 E-value=3.9e-06 Score=82.79 Aligned_cols=70 Identities=11% Similarity=0.049 Sum_probs=59.5
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCC-------------------------------------------
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKG------------------------------------------- 252 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~------------------------------------------- 252 (309)
..+++.|++..++|+|+..+.+||++|++.+.+...+
T Consensus 46 ~r~~i~p~Gl~lPh~~~a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (466)
T 3kgl_A 46 VRYIIESKGLYLPSFFSTAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSPFGEGQGQGQQGQGQGHQGQGQGQQG 125 (466)
T ss_dssp EEEEECTTEEEEEEEESSCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC----------------------------
T ss_pred EEEEECCCCEeCCeeCCCCeEEEEEeCeEEEEEecCCCcchhhccccccccccccccccccccccccccccccccccccc
Confidence 5789999999999999999999999999998654220
Q ss_pred -------------------eEEEecCCcEEEECCCCeEEEEEcCCceEEEEE
Q 021654 253 -------------------ERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 253 -------------------~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~ 285 (309)
+.+.|++||.++||+|++|.+.|.+++++.++.
T Consensus 126 ~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~ 177 (466)
T 3kgl_A 126 QQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVS 177 (466)
T ss_dssp -------------CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEEEE
T ss_pred cccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCCCcEEEEE
Confidence 125899999999999999999999988876543
No 119
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=98.17 E-value=9.2e-06 Score=80.11 Aligned_cols=85 Identities=14% Similarity=0.176 Sum_probs=63.4
Q ss_pred CCeeecCCceEEEeeeC--CC-------eEEEEEcCCCcCCCeecCCc-eEEEEEecEEEEEEeeC--CeEE--EecCCc
Q 021654 196 NPVEMIPGGSMKIIRES--PT-------SAIVRFKAGSVEPAHHHTFG-HDLVVLQGKKSVWNLTK--GERF--DLTVGD 261 (309)
Q Consensus 196 ~~~~~~pgg~~~il~~~--~~-------~~~~~l~pG~~~p~H~H~~~-e~vyVlsG~l~v~i~~~--~~~~--~L~pGD 261 (309)
.++....||.+..+... |. ...+.+.||+..++|||+.. |++||++|++++.+... .+.+ .|.+||
T Consensus 297 ~dv~~~~gG~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GD 376 (465)
T 3qac_A 297 ADVYTPEAGRLTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQ 376 (465)
T ss_dssp CSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTC
T ss_pred CCcccCCCceEEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCe
Confidence 34555567777766432 21 26789999999999999865 66999999999987543 2344 499999
Q ss_pred EEEECCCCeEEEEEcCCceE
Q 021654 262 YLFTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 262 ~v~IP~g~~H~~~n~gd~~~ 281 (309)
+++||.|.+|...+ +++.+
T Consensus 377 VfvvP~g~~h~~~a-g~e~~ 395 (465)
T 3qac_A 377 LVVVPQNFAIVKQA-FEDGF 395 (465)
T ss_dssp EEEECTTCEEEEEE-EEEEE
T ss_pred EEEECCCcEEEEEc-CCCCe
Confidence 99999999998764 44444
No 120
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=98.14 E-value=1.5e-05 Score=78.32 Aligned_cols=85 Identities=16% Similarity=0.168 Sum_probs=64.4
Q ss_pred CCCCeeecCCceEEEeeeCCC---------eEEEEEcCCCcCCCeecCCceE-EEEEecEEEEEEeeCC----------e
Q 021654 194 ELNPVEMIPGGSMKIIRESPT---------SAIVRFKAGSVEPAHHHTFGHD-LVVLQGKKSVWNLTKG----------E 253 (309)
Q Consensus 194 e~~~~~~~pgg~~~il~~~~~---------~~~~~l~pG~~~p~H~H~~~e~-vyVlsG~l~v~i~~~~----------~ 253 (309)
+-.+..-..+|.+..+....- ...+.+.||+..++|||+...+ +||++|++++.+...+ +
T Consensus 253 ~~~p~~~~~~G~v~~~~~~~fP~L~~l~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~~~~~g~~ 332 (445)
T 2cav_A 253 SRDPIYSNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQQQQGLESMQ 332 (445)
T ss_dssp SSCCSEESSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC-----------C
T ss_pred ccCCCccCCCceEEEeChHHCcccccCCCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeCCCcccccccCcc
Confidence 434444456776665533221 2678999999999999987655 9999999999875432 2
Q ss_pred ----EEEecCCcEEEECCCCeEEEEEcCC
Q 021654 254 ----RFDLTVGDYLFTPAGDVHRVKYYEE 278 (309)
Q Consensus 254 ----~~~L~pGD~v~IP~g~~H~~~n~gd 278 (309)
...|++||.+++|.|.+|...|.++
T Consensus 333 ~~~~~~~l~~GdV~vvP~g~~h~~~n~~~ 361 (445)
T 2cav_A 333 LRRYAATLSEGDIIVIPSSFPVALKAASD 361 (445)
T ss_dssp CEEEEEEECTTCEEEECTTCCEEEEESSS
T ss_pred eEEEEeEecCCcEEEEcCCcEEEEEcCCC
Confidence 5669999999999999999999854
No 121
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=98.13 E-value=3.9e-05 Score=66.04 Aligned_cols=78 Identities=15% Similarity=0.194 Sum_probs=61.0
Q ss_pred eEEEeeeCCCe--EEEEEcCCCcCCCeecCCce-EEEEEecEEEEEEe--eCC-----eEEEecCCcEEEECCCCeEEEE
Q 021654 205 SMKIIRESPTS--AIVRFKAGSVEPAHHHTFGH-DLVVLQGKKSVWNL--TKG-----ERFDLTVGDYLFTPAGDVHRVK 274 (309)
Q Consensus 205 ~~~il~~~~~~--~~~~l~pG~~~p~H~H~~~e-~vyVlsG~l~v~i~--~~~-----~~~~L~pGD~v~IP~g~~H~~~ 274 (309)
.+.++..++.. .++.+.||+.++.|-|.... .+.||+|+++.+.. .++ ++..+.+||+++.|++.+|++.
T Consensus 59 tR~ll~~~~~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~ 138 (171)
T 3eqe_A 59 GRNAIYRNNELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMS 138 (171)
T ss_dssp EEEEEEECSSCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEE
T ss_pred EEEEEecCCCeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEE
Confidence 34455544332 67899999999999999754 47799999997542 133 4788999999999999999999
Q ss_pred EcCCceEE
Q 021654 275 YYEETEFF 282 (309)
Q Consensus 275 n~gd~~~~ 282 (309)
|.++.+.+
T Consensus 139 N~~~~~aV 146 (171)
T 3eqe_A 139 NPTSERMV 146 (171)
T ss_dssp CCSSSCEE
T ss_pred CCCCCCEE
Confidence 99987664
No 122
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=98.12 E-value=1e-05 Score=78.83 Aligned_cols=95 Identities=17% Similarity=0.249 Sum_probs=69.2
Q ss_pred EeecCCCCCeeecCCceEEEeee----C---C---C--eEEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeC--CeE
Q 021654 189 LVKNRELNPVEMIPGGSMKIIRE----S---P---T--SAIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTK--GER 254 (309)
Q Consensus 189 v~~~~e~~~~~~~pgg~~~il~~----~---~---~--~~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~--~~~ 254 (309)
+.+.+.|....-...|.++++.. . + . -..+++.|++..++|+....+.+||++|++.+.+... ..+
T Consensus 8 ~f~~~~f~~~~~se~G~i~~l~~f~~~s~~l~~l~~~~l~~~~l~p~gl~~Phh~~A~ei~yV~~G~g~~g~V~~~~~~~ 87 (418)
T 3s7i_A 8 YFPSRRFSTRYGNQNGRIRVLQRFDQRSRQFQNLQNHRIVQIEAKPNTLVLPKHADADNILVIQQGQATVTVANGNNRKS 87 (418)
T ss_dssp EECGGGEEEEEECSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEEE
T ss_pred ccccccccceEEcCCcEEEEecccCCcchhcccccceEEEEEEecCCceeeeeeCCCCeEEEEEEeeEEEEEEecCCEEE
Confidence 44555566555566777877631 1 1 1 1567899999999994455555999999999965322 357
Q ss_pred EEecCCcEEEECCCCeEEEEEcCCc-eEEE
Q 021654 255 FDLTVGDYLFTPAGDVHRVKYYEET-EFFI 283 (309)
Q Consensus 255 ~~L~pGD~v~IP~g~~H~~~n~gd~-~~~i 283 (309)
+.|++||.+++|+|.+|.+.|.++. .+.+
T Consensus 88 ~~l~~GDv~~~P~G~~h~~~N~g~~~~l~i 117 (418)
T 3s7i_A 88 FNLDEGHALRIPSGFISYILNRHDNQNLRV 117 (418)
T ss_dssp EEEETTEEEEECTTCEEEEEECCSSCCEEE
T ss_pred EEecCCCEEEECCCCeEEEEecCCCccEEE
Confidence 9999999999999999999998754 4443
No 123
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=98.02 E-value=1.2e-05 Score=80.18 Aligned_cols=72 Identities=11% Similarity=0.052 Sum_probs=61.5
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeC--------------------------------------------
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTK-------------------------------------------- 251 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~-------------------------------------------- 251 (309)
..+++.|++..++|+|+..+++||++|++.+-+...
T Consensus 51 ~R~~i~p~Gl~lPh~~~a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (531)
T 3fz3_A 51 SRITIQRNGLHLPSYSNAPQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQGRQQEQEQERQQQQQGEQGRQQGQQEQQQ 130 (531)
T ss_dssp EEEEECTTEEEEEEEESSCEEEEEEECEEEEEECCTTCCCCEECCCC---------------------------------
T ss_pred EEEEecCCCEeCCccCCCCeEEEEEECcEEEEEEcCCCcccccccccccccccccccccccccccccccccccccccccc
Confidence 568999999999999999999999999998855321
Q ss_pred ----------------------------------------CeEEEecCCcEEEECCCCeEEEEEcCCceEEEEEcC
Q 021654 252 ----------------------------------------GERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWDG 287 (309)
Q Consensus 252 ----------------------------------------~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~~~ 287 (309)
.+.+.+++||++.||+|+.|++.|.+++++++++..
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~vr~GDviaiPaG~~~w~yN~G~~~l~iv~~~ 206 (531)
T 3fz3_A 131 ERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKTRRIREGDVVAIPAGVAYWSYNDGDQELVAVNLF 206 (531)
T ss_dssp ----------------------------------CCSCEESCCEEEETTEEEEECTTCCEEEECCSSSCEEEEEEE
T ss_pred ccccccccchhccccccccccccccccccccccccccccceeeecccCCcEEEECCCCeEEEEeCCCceEEEEEEE
Confidence 124788999999999999999999999998776643
No 124
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=98.00 E-value=6.3e-05 Score=66.63 Aligned_cols=66 Identities=24% Similarity=0.319 Sum_probs=55.1
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEee---------CCeEEEecCCcEEEECC--CCeEEEEEc-CCceE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLT---------KGERFDLTVGDYLFTPA--GDVHRVKYY-EETEF 281 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~---------~~~~~~L~pGD~v~IP~--g~~H~~~n~-gd~~~ 281 (309)
.++.+.||+..|.|.|.....+.||+|+++.++.. .+++..+.+|+..++++ |.+|++.|. ++.+.
T Consensus 82 ~~l~w~PGq~spiHdH~~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~~~a 159 (208)
T 2gm6_A 82 VSFVWGPGQRTPIHDHTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDDRVS 159 (208)
T ss_dssp EEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSSCE
T ss_pred EEEEeCCCcccCcccCCcceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCCCcE
Confidence 67889999999999999877799999999875421 13468999999999999 999999998 45544
No 125
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=97.98 E-value=3.9e-05 Score=74.78 Aligned_cols=86 Identities=20% Similarity=0.170 Sum_probs=63.5
Q ss_pred CCCCCeeecCCceEEEeeeCCC----------eEEEEEcCCCcCCCeecC-CceEEEEEecEEEEEEeeCC---------
Q 021654 193 RELNPVEMIPGGSMKIIRESPT----------SAIVRFKAGSVEPAHHHT-FGHDLVVLQGKKSVWNLTKG--------- 252 (309)
Q Consensus 193 ~e~~~~~~~pgg~~~il~~~~~----------~~~~~l~pG~~~p~H~H~-~~e~vyVlsG~l~v~i~~~~--------- 252 (309)
.+-.+.....+|+...+..... ...+++.||+..++|||+ ..+++||++|++++.+...+
T Consensus 233 ~~~~p~~~n~~G~~~~~~~~~~~p~L~~~gis~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~~~ 312 (418)
T 3s7i_A 233 REGEPDLSNNFGKLFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRKEQQQRGRR 312 (418)
T ss_dssp TCSCCSEEETTEEEEEECSBTTBHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEEC-------
T ss_pred ccCCCceeCCCCeEEEechHHcchhhccCCeeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCCcccccccc
Confidence 3344443456777665533211 267899999999999996 55669999999999764322
Q ss_pred ------------------e-EEEecCCcEEEECCCCeEEEEEcCC
Q 021654 253 ------------------E-RFDLTVGDYLFTPAGDVHRVKYYEE 278 (309)
Q Consensus 253 ------------------~-~~~L~pGD~v~IP~g~~H~~~n~gd 278 (309)
. ...|++||.+++|+|.+|...|.++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~~~~ 357 (418)
T 3s7i_A 313 EEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINASSE 357 (418)
T ss_dssp ------------CCEEEEEEEEEECTTCEEEECTTCCEEEEESSC
T ss_pred ccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEECCCC
Confidence 1 4778999999999999999988765
No 126
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=97.89 E-value=3.3e-05 Score=64.19 Aligned_cols=62 Identities=15% Similarity=0.074 Sum_probs=49.8
Q ss_pred CcCCCeecCC-ceEEEEEecEEEEEEeeC------CeEEEecCCcEEEECCCCeEEEEEcCCceEEEEE
Q 021654 224 SVEPAHHHTF-GHDLVVLQGKKSVWNLTK------GERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 224 ~~~p~H~H~~-~e~vyVlsG~l~v~i~~~------~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~ 285 (309)
....+|.|+. +|.++|++|++++.+..+ ++...|+||+.+.||.|+.|+.....++.+++.=
T Consensus 40 ~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~e~~vLLiE 108 (140)
T 3d0j_A 40 GIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQKDTKMMYVQ 108 (140)
T ss_dssp TCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECTTCEEEEEE
T ss_pred cCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCCCceEEEEEE
Confidence 3446798875 556999999999976521 4579999999999999999999998888776543
No 127
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=97.74 E-value=8.1e-05 Score=69.70 Aligned_cols=72 Identities=22% Similarity=0.371 Sum_probs=57.3
Q ss_pred EEEEEcCCCcCCCeecCCc-eEEEEEecEEEEEEe--eCCeEEEecC-C---cEEEECCCCeEEEEEcCCceE-EEEEcC
Q 021654 216 AIVRFKAGSVEPAHHHTFG-HDLVVLQGKKSVWNL--TKGERFDLTV-G---DYLFTPAGDVHRVKYYEETEF-FIKWDG 287 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~-e~vyVlsG~l~v~i~--~~~~~~~L~p-G---D~v~IP~g~~H~~~n~gd~~~-~i~~~~ 287 (309)
.+.+.+||....+|+|... |.++|++|+..+.+. +.++.+.+.. | +.++||+|..|.+.|.+++++ ++.|..
T Consensus 275 ~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~~~~~ 354 (369)
T 3st7_A 275 SVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIMWVN 354 (369)
T ss_dssp EEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCCCCEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEEEEES
T ss_pred EEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCCCcEEEEEecCCcceEEEeCCCceEEeEEcCCCcEEEEEecC
Confidence 5678899999999999865 559999999998442 3467788887 8 899999999999999995444 444443
No 128
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=97.74 E-value=0.00025 Score=65.26 Aligned_cols=61 Identities=16% Similarity=0.208 Sum_probs=49.3
Q ss_pred CCCcCCCeecC-CceEEEEEecEEEEEEeeCC--eEEEecCCcEEEECCCCeEEEEEcCCceEEE
Q 021654 222 AGSVEPAHHHT-FGHDLVVLQGKKSVWNLTKG--ERFDLTVGDYLFTPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 222 pG~~~p~H~H~-~~e~vyVlsG~l~v~i~~~~--~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i 283 (309)
|+....+| |+ .+|++|+++|.+.+.+..++ +...|++|+.+++|+|++|+-....++..++
T Consensus 40 pN~R~d~H-~~~~dE~FyqlkG~m~l~~~d~g~~~~V~i~eGemfllP~gv~HsP~r~~et~gLv 103 (286)
T 2qnk_A 40 PNTRKDYH-IEEGEEVFYQLEGDMVLRVLEQGKHRDVVIRQGEIFLLPARVPHSPQRFANTVGLV 103 (286)
T ss_dssp CBCCCCEE-ECSSCEEEEEEESCEEEEEEETTEEEEEEECTTEEEEECTTCCEEEEECTTCEEEE
T ss_pred CCcCccCc-CCCCCeEEEEEeCeEEEEEEeCCceeeEEECCCeEEEeCCCCCcCCcccCCeEEEE
Confidence 45568899 65 45669999999999876433 3799999999999999999998877766554
No 129
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.60 E-value=0.00081 Score=54.22 Aligned_cols=63 Identities=13% Similarity=0.174 Sum_probs=49.3
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCce
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETE 280 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~ 280 (309)
.+....||... ++.+...|+.|+|+|+++++. .+++...+.+||.+++|+|..-.+.-.+...
T Consensus 45 GvWe~tPG~~~-~~~~~~~E~~~iLeG~~~lt~-ddG~~~~l~aGD~~~~P~G~~gtWev~e~vr 107 (116)
T 3es4_A 45 AVWMAEPGIYN-YAGRDLEETFVVVEGEALYSQ-ADADPVKIGPGSIVSIAKGVPSRLEILSSFR 107 (116)
T ss_dssp EEEEECSEEEE-ECCCSEEEEEEEEECCEEEEE-TTCCCEEECTTEEEEECTTCCEEEEECSCEE
T ss_pred EEEecCCceeE-CeeCCCcEEEEEEEeEEEEEe-CCCeEEEECCCCEEEECCCCeEEEEEeEEEe
Confidence 55667777533 344555688999999999974 4678899999999999999999998876544
No 130
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.59 E-value=0.0001 Score=66.47 Aligned_cols=48 Identities=4% Similarity=-0.038 Sum_probs=44.1
Q ss_pred CCCeecCCceEEEEEecEEEEEEeeCCe---EEEecCCcEEEECCCCeEEEEEc
Q 021654 226 EPAHHHTFGHDLVVLQGKKSVWNLTKGE---RFDLTVGDYLFTPAGDVHRVKYY 276 (309)
Q Consensus 226 ~p~H~H~~~e~vyVlsG~l~v~i~~~~~---~~~L~pGD~v~IP~g~~H~~~n~ 276 (309)
.+.|+|+..+++||++|+++ .++ ++ .+.+.+||.+++|||.+|.+...
T Consensus 22 ~~~~~~~~~~i~~v~~G~~~-~i~--~~~~~~~~l~~g~l~~i~p~~~h~~~~~ 72 (276)
T 3gbg_A 22 FNNLYINDYKMFWIDSGIAK-LID--KNCLVSYEINSSSIILLKKNSIQRFSLT 72 (276)
T ss_dssp EEEEECSSCEEEEESSSCEE-EEE--TTTTEEEEECTTEEEEECTTCEEEEEEE
T ss_pred ccHhhhcceEEEEEecCceE-EEC--CccceeEEEcCCCEEEEcCCCceeeccc
Confidence 47899999999999999999 765 77 99999999999999999999876
No 131
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=97.51 E-value=0.00032 Score=61.68 Aligned_cols=66 Identities=21% Similarity=0.177 Sum_probs=54.0
Q ss_pred EEEEEcCCCcCCCeecCC-ceEEEEEecEEEEEEee---C-------CeEEEecCCcEEEE-CCCCeEEEEEcC-CceE
Q 021654 216 AIVRFKAGSVEPAHHHTF-GHDLVVLQGKKSVWNLT---K-------GERFDLTVGDYLFT-PAGDVHRVKYYE-ETEF 281 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~-~e~vyVlsG~l~v~i~~---~-------~~~~~L~pGD~v~I-P~g~~H~~~n~g-d~~~ 281 (309)
.++.+.||..+|.|-|.. ...+.||+|+++-+... + .....+.+|++.++ |++-.|++.|.+ +.+.
T Consensus 73 ~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~~~a 151 (200)
T 3eln_A 73 MILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHTEPA 151 (200)
T ss_dssp EEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSSCCE
T ss_pred EEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCCCCE
Confidence 568999999999999995 56699999999975421 1 23689999999999 888899999998 4444
No 132
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.51 E-value=0.00036 Score=62.33 Aligned_cols=82 Identities=18% Similarity=0.273 Sum_probs=63.4
Q ss_pred CCceEEEeeeCCC--eEEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEE-cCC
Q 021654 202 PGGSMKIIRESPT--SAIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKY-YEE 278 (309)
Q Consensus 202 pgg~~~il~~~~~--~~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n-~gd 278 (309)
+|.+...|..... ..+++++||...+.|.| ..++++||+|++.- ++ -.+++|+.+..|++..|...+ ...
T Consensus 133 ~Gv~~~~L~~~~~E~v~l~r~~~G~~~~~~~h-gG~EilVL~G~~~d----~~--~~~~~GsWlR~P~gs~h~~~ag~~g 205 (223)
T 3o14_A 133 EGISTSLLHEDERETVTHRKLEPGANLTSEAA-GGIEVLVLDGDVTV----ND--EVLGRNAWLRLPEGEALSATAGARG 205 (223)
T ss_dssp TTEEEEEEEECSSCEEEEEEECTTCEEEECCS-SCEEEEEEEEEEEE----TT--EEECTTEEEEECTTCCEEEEEEEEE
T ss_pred CCeEEEEEecCCCcEEEEEEECCCCccCCCCC-CcEEEEEEEeEEEE----CC--ceECCCeEEEeCCCCccCcEECCCC
Confidence 5666666665542 37899999999999999 78888999999775 23 488999999999999999988 445
Q ss_pred ceEEEEEcCcccc
Q 021654 279 TEFFIKWDGRWDM 291 (309)
Q Consensus 279 ~~~~i~~~~~~~i 291 (309)
+.++++- |++..
T Consensus 206 ~~i~~k~-ghl~~ 217 (223)
T 3o14_A 206 AKIWMKT-GHLRF 217 (223)
T ss_dssp EEEEEEE-SGGGG
T ss_pred eEEEEEe-cCCCC
Confidence 5555554 66643
No 133
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.46 E-value=0.0004 Score=62.71 Aligned_cols=67 Identities=16% Similarity=0.223 Sum_probs=52.0
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEE-EEEc
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFF-IKWD 286 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~-i~~~ 286 (309)
.++.+ .|.... -.+++.|..|||+|+++++. +++.+.++|||+++||.|..|++...+....+ +.+.
T Consensus 50 G~~~~-~g~~~v-~~~p~dE~~~VleG~~~lt~--~g~~~~~~~Gd~~~ip~G~~~~w~~~~~~~~~y~~~~ 117 (238)
T 3myx_A 50 GIVEF-GTALSV-EAYPYTEMLVMHRGSVTLTS--GTDSVTLSTGESAVIGRGTQVRIDAQPESLWAFCAST 117 (238)
T ss_dssp EEEEE-CSEEEE-SSCSSEEEEEEEESEEEEEE--TTEEEEEETTCEEEECTTCCEEEEECTTEEEEEEEEC
T ss_pred EEEEe-cccccc-ccCCCcEEEEEEEeEEEEEC--CCeEEEEcCCCEEEECCCCEEEEEecCCeEEEEEecc
Confidence 56677 554433 22445789999999999964 69999999999999999999999998876543 4444
No 134
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=97.41 E-value=0.0016 Score=57.70 Aligned_cols=76 Identities=18% Similarity=0.219 Sum_probs=58.3
Q ss_pred EEEeeeCCC----eEEEEEcCCCcCCCeecCCceEEEEEecEEEEEEe--e-CC------eEEEecCCcEEEECCC--Ce
Q 021654 206 MKIIRESPT----SAIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNL--T-KG------ERFDLTVGDYLFTPAG--DV 270 (309)
Q Consensus 206 ~~il~~~~~----~~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~--~-~~------~~~~L~pGD~v~IP~g--~~ 270 (309)
..++..++. -.++.+.||..+|.|-|.....+.|++|+++-+.. . ++ +...+.+|++.+++++ .+
T Consensus 62 r~lL~~dp~~~f~v~~l~W~PGq~spiHDH~swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~I 141 (211)
T 3uss_A 62 QYLLHVDSRQRFSVVSFVWGPGQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDV 141 (211)
T ss_dssp EEEEEECTTSSCEEEEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCC
T ss_pred EEEEecCCCCCEEEEEEEECCCCcCCCCCCCeeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCE
Confidence 345555442 26789999999999999977779999999987542 1 12 2488999999999998 89
Q ss_pred EEEEEcC-CceE
Q 021654 271 HRVKYYE-ETEF 281 (309)
Q Consensus 271 H~~~n~g-d~~~ 281 (309)
|++.|.. +.+.
T Consensus 142 H~V~N~~~d~~a 153 (211)
T 3uss_A 142 HQVSNAFSDRTS 153 (211)
T ss_dssp EEEEESCSSSCE
T ss_pred EEEccCCCCCCE
Confidence 9999985 5543
No 135
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=97.40 E-value=0.0013 Score=54.73 Aligned_cols=72 Identities=15% Similarity=0.120 Sum_probs=52.7
Q ss_pred EEEcCCCcCCCeecCCceE-EEEEecEEEEEEeeCC--eEEEecCCc-EEEECCCCeEEEEEcCC-ceEEEEEcCcc
Q 021654 218 VRFKAGSVEPAHHHTFGHD-LVVLQGKKSVWNLTKG--ERFDLTVGD-YLFTPAGDVHRVKYYEE-TEFFIKWDGRW 289 (309)
Q Consensus 218 ~~l~pG~~~p~H~H~~~e~-vyVlsG~l~v~i~~~~--~~~~L~pGD-~v~IP~g~~H~~~n~gd-~~~~i~~~~~~ 289 (309)
..++||....+|.|...++ +++++|+..+.+..+. +++.|...+ .++|||++.|.+.+.++ +.++++-.+..
T Consensus 40 ~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg~~~~~~~L~~~~~gL~IppgvWh~~~~~s~~avllvlas~~Y 116 (141)
T 2pa7_A 40 FDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDGNIIQEITLDSPAVGLYVGPAVWHEMHDFSSDCVMMVLASDYY 116 (141)
T ss_dssp ESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECSSCEEEEEECCTTEEEEECTTCEEEEECCCTTCEEEEEESSCC
T ss_pred EecCCCCEECcCcCCCceEEEEEEccEEEEEEECCcEEEEEEECCCCcEEEeCCCEEEEEEEcCCCeEEEEECCCCc
Confidence 3455888899999976554 9999999999775332 356666554 69999999999999875 44555544444
No 136
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.25 E-value=0.0036 Score=56.47 Aligned_cols=63 Identities=11% Similarity=0.140 Sum_probs=50.8
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCce
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETE 280 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~ 280 (309)
.+....||...+++ |+..|+.|||+|+++++. .+++.+.+++||.+++|+|..=.|.-.+...
T Consensus 170 GiW~~tpG~~~~~~-~~~~E~~~ILeG~v~lt~-~~G~~~~~~aGD~~~~P~G~~~tWev~e~vr 232 (238)
T 3myx_A 170 GVWDSTPYERISRP-HKIHELMNLIEGRVVLSL-ENGSSLTVNTGDTVFVAQGAPCKWTSTGYVR 232 (238)
T ss_dssp EEEEECCEEBCCEE-CSSCEEEEEEECCEEEEE-TTSCEEEECTTCEEEECTTCEEEEEESSCEE
T ss_pred eEEEeCCCEEECCc-CCCCEEEEEEEeEEEEEe-CCCCEEEECCCCEEEECCCCEEEEEECccEE
Confidence 67778888755543 456789999999999963 4678899999999999999999888776433
No 137
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=96.92 E-value=0.0033 Score=56.45 Aligned_cols=63 Identities=22% Similarity=0.409 Sum_probs=49.4
Q ss_pred EEEEEcCCCcCCCeecCCceE-EEEEec---EEEEEEee--------------C--------CeEEEecCCcEEEECCCC
Q 021654 216 AIVRFKAGSVEPAHHHTFGHD-LVVLQG---KKSVWNLT--------------K--------GERFDLTVGDYLFTPAGD 269 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~-vyVlsG---~l~v~i~~--------------~--------~~~~~L~pGD~v~IP~g~ 269 (309)
.++.+.+|+..|.|.|+.-++ +++.-| .++++... + +....|.||+++.++||+
T Consensus 109 K~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~Pg~ 188 (246)
T 3kmh_A 109 KIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICLPPGL 188 (246)
T ss_dssp EEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEECTTE
T ss_pred eEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEecCCCC
Confidence 567889999999999988776 777777 44544321 1 244688999999999999
Q ss_pred eEEEEEcCC
Q 021654 270 VHRVKYYEE 278 (309)
Q Consensus 270 ~H~~~n~gd 278 (309)
.|+|+..++
T Consensus 189 ~H~F~ae~g 197 (246)
T 3kmh_A 189 YHSFWAEAG 197 (246)
T ss_dssp EEEEEECTT
T ss_pred EEEEEecCC
Confidence 999999876
No 138
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=96.88 E-value=0.0041 Score=56.67 Aligned_cols=60 Identities=13% Similarity=0.133 Sum_probs=51.5
Q ss_pred EEEcCCCcCCCeecCCceE-EEEEecEEEEEEeeCCeEEEecCCcEEEECC--CCeEEEEEcCC
Q 021654 218 VRFKAGSVEPAHHHTFGHD-LVVLQGKKSVWNLTKGERFDLTVGDYLFTPA--GDVHRVKYYEE 278 (309)
Q Consensus 218 ~~l~pG~~~p~H~H~~~e~-vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~--g~~H~~~n~gd 278 (309)
.++.||..+++|.|...|. .||++|+++-. +.-+..-.+.|||+-|+.+ |+.|+-.|..+
T Consensus 69 ~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~-DS~Gn~~~i~~GdvQ~MtAG~GI~HsE~n~~~ 131 (256)
T 2vec_A 69 EVLAPGAAFQPRTYPKVDILNVILDGEAEYR-DSEGNHVQASAGEALLLSTQPGVSYSEHNLSK 131 (256)
T ss_dssp EEECTTCEEEEECCSSEEEEEEEEESEEEEE-ETTSCEEEEETTEEEEECCCTTCCEEEEECCS
T ss_pred cccCCCCccCCcCCCCcEEEEEEEeeEEEEE-eCCCCEEEECCCeEEEEECCCCeEEEEEECCC
Confidence 4788999999999999997 89999999985 4447889999999999955 57999999753
No 139
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=96.78 E-value=0.0087 Score=51.45 Aligned_cols=64 Identities=13% Similarity=0.004 Sum_probs=49.4
Q ss_pred EEcCCCcCCCeecC-CceEEEEEecEEEEEEeeCC---------eEEEec---CCcEEEECCCCeEEEEEcCC-ceEE
Q 021654 219 RFKAGSVEPAHHHT-FGHDLVVLQGKKSVWNLTKG---------ERFDLT---VGDYLFTPAGDVHRVKYYEE-TEFF 282 (309)
Q Consensus 219 ~l~pG~~~p~H~H~-~~e~vyVlsG~l~v~i~~~~---------~~~~L~---pGD~v~IP~g~~H~~~n~gd-~~~~ 282 (309)
...+|....+|.|. ..+.++|++|++.+.+.... ..+.|. +...+|||+|..|.+.+.++ ...+
T Consensus 59 ~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~ 136 (174)
T 3ejk_A 59 EVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALV 136 (174)
T ss_dssp EECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEE
T ss_pred ECCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEE
Confidence 34678888999986 56669999999998653222 367787 56799999999999999987 3443
No 140
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=96.71 E-value=0.0053 Score=53.38 Aligned_cols=61 Identities=23% Similarity=0.266 Sum_probs=47.1
Q ss_pred cCCCcCCCeecCCceEEEEEecEEEEEEeeC-------------------------------------CeEEEecCCcEE
Q 021654 221 KAGSVEPAHHHTFGHDLVVLQGKKSVWNLTK-------------------------------------GERFDLTVGDYL 263 (309)
Q Consensus 221 ~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~-------------------------------------~~~~~L~pGD~v 263 (309)
.+|+..+.|..+..-++.++.|+-++.+.-. .-+.+|+|||.+
T Consensus 132 ~~gs~t~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~L 211 (235)
T 4gjz_A 132 PQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEIL 211 (235)
T ss_dssp CTTCEEEEECCSSEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEECTTCEE
T ss_pred CCCCCceeeeccccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEECCCCEE
Confidence 3466677787777667888999999876311 125789999999
Q ss_pred EECCCCeEEEEEcCCceE
Q 021654 264 FTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 264 ~IP~g~~H~~~n~gd~~~ 281 (309)
|||+|-.|.++|.+++..
T Consensus 212 yiP~gW~H~V~~l~~sis 229 (235)
T 4gjz_A 212 FIPVKYWHYVRALDLSFS 229 (235)
T ss_dssp EECTTCEEEEEESSSEEE
T ss_pred EeCCCCcEEEEECCCEEE
Confidence 999999999999986544
No 141
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=96.62 E-value=0.0096 Score=54.14 Aligned_cols=77 Identities=22% Similarity=0.278 Sum_probs=58.0
Q ss_pred ceEEEeeeCC---CeEEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeE-EEEEcCCc
Q 021654 204 GSMKIIRESP---TSAIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVH-RVKYYEET 279 (309)
Q Consensus 204 g~~~il~~~~---~~~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H-~~~n~gd~ 279 (309)
|+.|++.-.. .+..+.|+|+...|.=.|...-++|||+|++.+ + .+.|.++.+.++|+|+.- .++..++.
T Consensus 79 gs~RlLs~~d~GaSTl~V~fpp~~~~P~Gi~~ad~E~fVL~G~i~~--G----~~~l~~h~Y~f~PaGV~~~~~kv~~~~ 152 (303)
T 2qdr_A 79 GSRRLLTWHDSGASTSRVVLPPKFEAPSGIFTADLEIFVIKGAIQL--G----EWQLNKHSYSFIPAGVRIGSWKVLGGE 152 (303)
T ss_dssp EEEEEEEECTTSCEEEEEEECTTCEECCBEESSCEEEEEEESEEEE--T----TEEECTTEEEEECTTCCBCCEEEETTS
T ss_pred cceeecccCCCCcceEEEEecCCCCCCCcccccceEEEEEEeEEEe--C----CEEecCCceEEecCCCccCceeecCCC
Confidence 4555543321 237899999999999888888889999999999 2 468999999999999976 45665655
Q ss_pred eEEEEEc
Q 021654 280 EFFIKWD 286 (309)
Q Consensus 280 ~~~i~~~ 286 (309)
.+.++|-
T Consensus 153 g~~iL~f 159 (303)
T 2qdr_A 153 EAEILWM 159 (303)
T ss_dssp CEEEEEE
T ss_pred CcEEEEE
Confidence 5554444
No 142
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=96.54 E-value=0.009 Score=53.87 Aligned_cols=59 Identities=20% Similarity=0.142 Sum_probs=50.7
Q ss_pred EEEcCCCcCCCeecCCceE-EEEEecEEEEEEeeCCeEEEecCCcEEEECC--CCeEEEEEcC
Q 021654 218 VRFKAGSVEPAHHHTFGHD-LVVLQGKKSVWNLTKGERFDLTVGDYLFTPA--GDVHRVKYYE 277 (309)
Q Consensus 218 ~~l~pG~~~p~H~H~~~e~-vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~--g~~H~~~n~g 277 (309)
..+.||...++|.|...|. .||++|+++-. +.-+..-.+.|||+-|+.+ |+.|+-.|..
T Consensus 46 d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~-DS~Gn~~~i~~GdvQ~MtAG~GI~HsE~~~~ 107 (242)
T 1tq5_A 46 DVIEAGQGFGTHPHKDMEILTYVLEGTVEHQ-DSMGNKEQVPAGEFQIMSAGTGIRHSEYNPS 107 (242)
T ss_dssp EEECTTCEEEEEEECSCEEEEEEEESEEEEE-ESSSCEEEEETTCEEEEECTTCEEEEEECCC
T ss_pred ceeCCCCcCCCcCCCCcEEEEEEEEeEEEEE-eCCCCcEEECCCcEEEEECCCCcEEEEEcCC
Confidence 4678999999999999997 89999999985 4447889999999999955 5899999865
No 143
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=96.50 E-value=0.0074 Score=55.48 Aligned_cols=47 Identities=23% Similarity=0.189 Sum_probs=42.0
Q ss_pred ceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEE
Q 021654 234 GHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 234 ~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~ 282 (309)
+-++++|+|+..|+ .+++++.|++||++.||+++.|.+....++.++
T Consensus 227 d~wiWqLEGss~Vt--~~~q~~~L~~~DsLLIpa~~~y~~~r~~gsv~L 273 (286)
T 2qnk_A 227 DVWLWQLEGSSVVT--MGGRRLSLAPDDSLLVLAGTSYAWERTQGSVAL 273 (286)
T ss_dssp CEEEEEEESCEEEE--ETTEEEEECTTEEEEECTTCCEEEEECTTCEEE
T ss_pred cEEEEEEcCceEEE--ECCeEEeccCCCEEEecCCCeEEEEecCCeEEE
Confidence 67799999999984 569999999999999999999999987777764
No 144
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=96.42 E-value=0.021 Score=53.92 Aligned_cols=65 Identities=25% Similarity=0.313 Sum_probs=49.1
Q ss_pred CCCcCCCeecCCceEEEEEecEEEEEEe-e------------------------------------CCeEEEecCCcEEE
Q 021654 222 AGSVEPAHHHTFGHDLVVLQGKKSVWNL-T------------------------------------KGERFDLTVGDYLF 264 (309)
Q Consensus 222 pG~~~p~H~H~~~e~vyVlsG~l~v~i~-~------------------------------------~~~~~~L~pGD~v~ 264 (309)
.|+.+++|+.+..-++..+.|+-++++. - .....+|+|||.+|
T Consensus 150 ~g~~~~~H~D~~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~pGD~Ly 229 (342)
T 1vrb_A 150 NGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLY 229 (342)
T ss_dssp SSCCCCSEECSSEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEECTTCEEE
T ss_pred CCCCCCCeECChhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEECCCcEEE
Confidence 3777888888777778888888887665 1 12467999999999
Q ss_pred ECCCCeEEEEEcCC-ceEEEEEc
Q 021654 265 TPAGDVHRVKYYEE-TEFFIKWD 286 (309)
Q Consensus 265 IP~g~~H~~~n~gd-~~~~i~~~ 286 (309)
||+|-.|.+.+.++ ..+-+.+.
T Consensus 230 iP~gwwH~v~s~~~~~slsvsi~ 252 (342)
T 1vrb_A 230 LPRGLWHSTKSDQATLALNITFG 252 (342)
T ss_dssp ECTTCEEEEECSSCEEEEEEEEC
T ss_pred eCCCccEEEEECCCCceEEEEEC
Confidence 99999999999854 34444433
No 145
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=96.40 E-value=0.0063 Score=49.66 Aligned_cols=71 Identities=17% Similarity=0.278 Sum_probs=49.7
Q ss_pred CCCcCCCe---e-cCCc-eEEEEEecEEEEEEeeC------CeEEEecCCcEEEECCCCeEEEEEc-CCceEEEEEcCcc
Q 021654 222 AGSVEPAH---H-HTFG-HDLVVLQGKKSVWNLTK------GERFDLTVGDYLFTPAGDVHRVKYY-EETEFFIKWDGRW 289 (309)
Q Consensus 222 pG~~~p~H---~-H~~~-e~vyVlsG~l~v~i~~~------~~~~~L~pGD~v~IP~g~~H~~~n~-gd~~~~i~~~~~~ 289 (309)
|+...+.| . |... ..+.|++|++++....+ .+...+++|+..++||+..|++... +|..+.|
T Consensus 23 P~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsdd~~f~l------ 96 (127)
T 3bb6_A 23 PAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNI------ 96 (127)
T ss_dssp CGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESSTTCEEEE------
T ss_pred hHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCCCEEEEE------
Confidence 34455667 3 5432 33899999999864222 3557789999999999999999984 5666654
Q ss_pred ccccchhHH
Q 021654 290 DMFFDEDLE 298 (309)
Q Consensus 290 ~i~~~e~~~ 298 (309)
++|.+++-+
T Consensus 97 eFyc~~~dy 105 (127)
T 3bb6_A 97 DFFVAPEVL 105 (127)
T ss_dssp EEEECHHHH
T ss_pred EEEeCCchh
Confidence 566666543
No 146
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=96.12 E-value=0.015 Score=50.96 Aligned_cols=62 Identities=15% Similarity=0.304 Sum_probs=49.5
Q ss_pred cCCCcCCCeecCCceEEEEEe-cEE-EEEEeeC-----C--eEEEecCCcEEEECCCCeEEEEEcCCceEE
Q 021654 221 KAGSVEPAHHHTFGHDLVVLQ-GKK-SVWNLTK-----G--ERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 221 ~pG~~~p~H~H~~~e~vyVls-G~l-~v~i~~~-----~--~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~ 282 (309)
.+|....+|.|.+.+.++|++ |++ .+.+... + ..+.|..+..+|||+|..|.+.+.++...+
T Consensus 68 ~~GvlRGlH~h~q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~a~~ 138 (197)
T 1nxm_A 68 RKNVLRGLHAEPWDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDFVAY 138 (197)
T ss_dssp ETTBEEEEEECSSCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSEEEE
T ss_pred CCCCcceeeecccceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCCeEE
Confidence 567788999999999999999 995 4444332 1 457888899999999999999999875543
No 147
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=96.10 E-value=0.021 Score=50.27 Aligned_cols=65 Identities=17% Similarity=0.150 Sum_probs=48.1
Q ss_pred cCCCcCCCeecC----CceEEEEEecEEEE-EEe--eCC------eEEEecC--CcEEEECCCCeEEEEEcCCceEEEEE
Q 021654 221 KAGSVEPAHHHT----FGHDLVVLQGKKSV-WNL--TKG------ERFDLTV--GDYLFTPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 221 ~pG~~~p~H~H~----~~e~vyVlsG~l~v-~i~--~~~------~~~~L~p--GD~v~IP~g~~H~~~n~gd~~~~i~~ 285 (309)
.+|....+|.|. +.+.++|++|++.. .+. .+. ..+.|.+ +..+|||+|..|.+.+.++...++.+
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~a~~~Y~ 157 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPHTIVMYK 157 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSSEEEEEE
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCCEEEEEE
Confidence 578888999984 67789999999643 222 121 3467775 78999999999999999876554443
No 148
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=95.89 E-value=0.038 Score=47.85 Aligned_cols=65 Identities=17% Similarity=0.123 Sum_probs=47.6
Q ss_pred cCCCcCCCeec---CCceEEEEEecEEE-EEEeeCC--------eEEEecC--CcEEEECCCCeEEEEEcCCceEEEEE
Q 021654 221 KAGSVEPAHHH---TFGHDLVVLQGKKS-VWNLTKG--------ERFDLTV--GDYLFTPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 221 ~pG~~~p~H~H---~~~e~vyVlsG~l~-v~i~~~~--------~~~~L~p--GD~v~IP~g~~H~~~n~gd~~~~i~~ 285 (309)
.+|....+|.| .+.+.++|++|++. +.+.... ..+.|.+ +..+|||+|..|.+.+.++...++.+
T Consensus 56 ~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~ 134 (185)
T 1ep0_A 56 VRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDECIVNYK 134 (185)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEE
T ss_pred cCCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEEe
Confidence 36888899988 67778999999974 3333211 2366654 57999999999999999976554443
No 149
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=95.82 E-value=0.0094 Score=44.62 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=29.5
Q ss_pred EEEEEcCCCcCCCeecCCceE-EEEEecEEEEEEe
Q 021654 216 AIVRFKAGSVEPAHHHTFGHD-LVVLQGKKSVWNL 249 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~-vyVlsG~l~v~i~ 249 (309)
..+.+.+|+..++|||+...+ +||++|++.+++.
T Consensus 39 ~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~V 73 (79)
T 1dgw_X 39 NCLQMNEGALFVPHYNSRATVILVANEGRAEVELV 73 (79)
T ss_dssp EEEEECTTCEEEEEEESSCEEEEEEEESCEEEEEE
T ss_pred EEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEEe
Confidence 567899999999999997755 9999999999653
No 150
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=95.75 E-value=0.046 Score=47.29 Aligned_cols=65 Identities=18% Similarity=0.117 Sum_probs=47.5
Q ss_pred cCCCcCCCeec---CCceEEEEEecEEE-EEEeeCC--------eEEEecC--CcEEEECCCCeEEEEEcCCceEEEEE
Q 021654 221 KAGSVEPAHHH---TFGHDLVVLQGKKS-VWNLTKG--------ERFDLTV--GDYLFTPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 221 ~pG~~~p~H~H---~~~e~vyVlsG~l~-v~i~~~~--------~~~~L~p--GD~v~IP~g~~H~~~n~gd~~~~i~~ 285 (309)
.+|....+|.| .+.+.++|++|++. +.+.... ..+.|.+ +..+|||+|..|.+.+.++...++.+
T Consensus 57 ~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~ 135 (184)
T 2ixk_A 57 ARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFLYK 135 (184)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEE
T ss_pred CCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCCEEEEEe
Confidence 36888899988 67778999999974 3333211 2356665 57999999999999999976554443
No 151
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=95.72 E-value=0.048 Score=51.18 Aligned_cols=82 Identities=28% Similarity=0.247 Sum_probs=55.8
Q ss_pred cCCCcCCCeecCCceEEEEEecEEEEEEeeC---------------------------------CeEEEecCCcEEEECC
Q 021654 221 KAGSVEPAHHHTFGHDLVVLQGKKSVWNLTK---------------------------------GERFDLTVGDYLFTPA 267 (309)
Q Consensus 221 ~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~---------------------------------~~~~~L~pGD~v~IP~ 267 (309)
.+|+..+.|..+..-++.++.|+-++.+.-. ..+.+|.|||.+|||+
T Consensus 175 ~~g~~~~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD~LyiP~ 254 (338)
T 3al5_A 175 SPGLQLWTHYDVMDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIPA 254 (338)
T ss_dssp CTTCEEEEECCSSEEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTCEEEECT
T ss_pred CCCCCccceECCcccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCCEEEECC
Confidence 4566677787777666777888888764310 2468999999999999
Q ss_pred CCeEEEEEcCCceEE-EEEcCcc-------ccccchhHHHHHH
Q 021654 268 GDVHRVKYYEETEFF-IKWDGRW-------DMFFDEDLEAAKK 302 (309)
Q Consensus 268 g~~H~~~n~gd~~~~-i~~~~~~-------~i~~~e~~~~~~~ 302 (309)
|-.|.+.+.+.+..+ +.|.... ++|-++|+..+.+
T Consensus 255 gWwH~v~~l~~sisvn~~~~~~~~~~~~~~~~y~~~dl~~~~~ 297 (338)
T 3al5_A 255 LWFHNVISEEFGVGVNIFWKHLPSECYDKTDTYGNKDPTAASR 297 (338)
T ss_dssp TCEEEEEESSCEEEEEEEECSSCGGGSCTTCSSSCSCCHHHHH
T ss_pred CCeEEEeeCCCEEEEEEEecCCccccCCcccccccCCchHHHH
Confidence 999999999765543 3454332 3455555544433
No 152
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=95.62 E-value=0.06 Score=47.06 Aligned_cols=66 Identities=20% Similarity=0.219 Sum_probs=48.3
Q ss_pred cCCCcCCCeecC----CceEEEEEecEEE-EEEeeC-C-------eEEEecC--CcEEEECCCCeEEEEEcCCceEEEEE
Q 021654 221 KAGSVEPAHHHT----FGHDLVVLQGKKS-VWNLTK-G-------ERFDLTV--GDYLFTPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 221 ~pG~~~p~H~H~----~~e~vyVlsG~l~-v~i~~~-~-------~~~~L~p--GD~v~IP~g~~H~~~n~gd~~~~i~~ 285 (309)
.+|....+|.|. +.+.++|++|++. +.+... + ..+.|.+ +..+|||+|..|.+.+.++...++.+
T Consensus 73 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~a~~ly~ 152 (196)
T 1wlt_A 73 RKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDSIVIYFI 152 (196)
T ss_dssp CTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSEEEEEEE
T ss_pred CCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEEE
Confidence 467778899886 5677999999994 333211 1 3466664 68999999999999999986655554
Q ss_pred c
Q 021654 286 D 286 (309)
Q Consensus 286 ~ 286 (309)
.
T Consensus 153 ~ 153 (196)
T 1wlt_A 153 T 153 (196)
T ss_dssp E
T ss_pred e
Confidence 4
No 153
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=95.61 E-value=0.048 Score=50.02 Aligned_cols=61 Identities=20% Similarity=0.158 Sum_probs=51.1
Q ss_pred EEcCCCcCCCeecCCceE-EEEEecEEEEEEeeCCeEEEecCCcEEEECCC--CeEEEEEcCCce
Q 021654 219 RFKAGSVEPAHHHTFGHD-LVVLQGKKSVWNLTKGERFDLTVGDYLFTPAG--DVHRVKYYEETE 280 (309)
Q Consensus 219 ~l~pG~~~p~H~H~~~e~-vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g--~~H~~~n~gd~~ 280 (309)
...++..+++|.|...|. .|+++|.++-. +.-+..-.+.|||+-|+-+| +.|+-.|..+.+
T Consensus 45 ~~~~~~gf~~HPHrg~EtVTyvl~G~~~H~-DS~Gn~~~i~~GdvQwMtAG~GI~HsE~~~~~~~ 108 (277)
T 2p17_A 45 DIFERGTFDVHPHRGIETVTYVISGELEHF-DSKAGHSTLGPGDVQWMTAGRGVVHKEDPASGST 108 (277)
T ss_dssp EEECTTCCCCEEECSEEEEEEEEESCEEEE-ETTTEEEEECTTCEEEEECTTCEEEEEEECTTCC
T ss_pred CCCCCCCCCCCCCCCcEEEEEEEEeEEEEe-eCCCCceEECCCeEEEEeCCCCEEEEeecCCCCC
Confidence 446788899999999997 89999999985 55578899999999999885 579999976543
No 154
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=95.43 E-value=0.075 Score=45.87 Aligned_cols=64 Identities=17% Similarity=0.129 Sum_probs=46.7
Q ss_pred CCCcCCCeec----CCceEEEEEecEEE-EEEeeC-C-------eEEEecC--CcEEEECCCCeEEEEEcCCceEEEEE
Q 021654 222 AGSVEPAHHH----TFGHDLVVLQGKKS-VWNLTK-G-------ERFDLTV--GDYLFTPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 222 pG~~~p~H~H----~~~e~vyVlsG~l~-v~i~~~-~-------~~~~L~p--GD~v~IP~g~~H~~~n~gd~~~~i~~ 285 (309)
+|....+|.| .+.+.++|++|++. +.+... + ..+.|.+ +..+|||+|..|.+.+.++...++.+
T Consensus 56 ~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~ 134 (183)
T 1dzr_A 56 KNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEYAEFLYK 134 (183)
T ss_dssp TTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEE
T ss_pred CCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEEE
Confidence 6888889988 56777999999974 333321 1 3366665 57999999999999999976554443
No 155
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=95.14 E-value=0.065 Score=47.51 Aligned_cols=65 Identities=14% Similarity=0.006 Sum_probs=47.2
Q ss_pred cCCCcCCCeecC----CceEEEEEecEEE-EEEee--C------CeEEEecC--CcEEEECCCCeEEEEEcCCceEEEEE
Q 021654 221 KAGSVEPAHHHT----FGHDLVVLQGKKS-VWNLT--K------GERFDLTV--GDYLFTPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 221 ~pG~~~p~H~H~----~~e~vyVlsG~l~-v~i~~--~------~~~~~L~p--GD~v~IP~g~~H~~~n~gd~~~~i~~ 285 (309)
.+|....+|.|. +.+.++|++|++. +.+.. + -..+.|.+ +..+|||+|..|.+.+.++...++.+
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a~~ly~ 142 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDEATLCYL 142 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCCeEEEEe
Confidence 467778899886 5788999999974 33221 1 13366665 47999999999999999976655443
No 156
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=95.00 E-value=0.13 Score=50.12 Aligned_cols=56 Identities=29% Similarity=0.389 Sum_probs=44.8
Q ss_pred CCCc-CCCeecCCceEEEEEecEEEEEEeeC-------------------CeEEEecCCcEEEECCCCeEEEEEcC
Q 021654 222 AGSV-EPAHHHTFGHDLVVLQGKKSVWNLTK-------------------GERFDLTVGDYLFTPAGDVHRVKYYE 277 (309)
Q Consensus 222 pG~~-~p~H~H~~~e~vyVlsG~l~v~i~~~-------------------~~~~~L~pGD~v~IP~g~~H~~~n~g 277 (309)
+|+. .++|+....-++..+.|+-++++... ....+|.|||.+|||+|..|..++.+
T Consensus 148 ~g~~g~~~H~D~~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~ 223 (442)
T 2xdv_A 148 AGSQGLPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADTPA 223 (442)
T ss_dssp TTCBCSCSEECSSEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEECCS
T ss_pred CCCCCccceECCcceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEecC
Confidence 4444 37999887778888999998875322 23689999999999999999999875
No 157
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=94.93 E-value=0.12 Score=47.10 Aligned_cols=73 Identities=15% Similarity=0.111 Sum_probs=57.2
Q ss_pred eEEEeeeCCCe---EEEEEcCCCcC-CCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEE--------
Q 021654 205 SMKIIRESPTS---AIVRFKAGSVE-PAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHR-------- 272 (309)
Q Consensus 205 ~~~il~~~~~~---~~~~l~pG~~~-p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~-------- 272 (309)
..++++.++.. .++++.||... ..-.|+..|++|+|+|.+ ..|++.+-|++++|.
T Consensus 206 ~~K~Lr~D~~G~~TrLlr~~Pg~dt~~v~iHdy~EEvY~LeG~~-------------d~G~Y~~RPpg~~HGps~~~~pp 272 (303)
T 2qdr_A 206 NKKWLRKDINGGGVWLLAILPHFDNKYQMIQPYNEEGYCLTGYC-------------DVGDYRIVKDHYWYCPSFSTLPR 272 (303)
T ss_dssp EEEEEEECTTSCEEEEEEECSSEECCSEEEECSCEEEEEEEEEE-------------EETTEEEETTEEEEECTTEEECC
T ss_pred HHHHhhcCCCCCeEEEEEECCCCCCCCceeeccceeEEEEeeec-------------cCceeeEcCCCCccCccccCCCC
Confidence 56677766543 78899999765 445699999999999977 349999999999998
Q ss_pred EEEcCCceEEEEEcCccc
Q 021654 273 VKYYEETEFFIKWDGRWD 290 (309)
Q Consensus 273 ~~n~gd~~~~i~~~~~~~ 290 (309)
+.....+.+++..++.++
T Consensus 273 f~Se~G~l~fvR~DgdLs 290 (303)
T 2qdr_A 273 HITDDGGLFFVRVDRDLS 290 (303)
T ss_dssp EEESSCEEEEEEESSCTT
T ss_pred cCcCCceEEEEEeCcccc
Confidence 555566777888887765
No 158
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=94.93 E-value=0.13 Score=45.17 Aligned_cols=64 Identities=17% Similarity=0.188 Sum_probs=46.3
Q ss_pred cCCCcCCCeecC----CceEEEEEecEEE-EEEeeC-C-------eEEEecC--CcEEEECCCCeEEEEEcCCceEEEE
Q 021654 221 KAGSVEPAHHHT----FGHDLVVLQGKKS-VWNLTK-G-------ERFDLTV--GDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 221 ~pG~~~p~H~H~----~~e~vyVlsG~l~-v~i~~~-~-------~~~~L~p--GD~v~IP~g~~H~~~n~gd~~~~i~ 284 (309)
.+|....+|.|. +.+.++|++|++. +.+... + ..+.|.+ +..+|||+|..|.+.+.++...++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y 133 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDDTVMSY 133 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTTEEEEE
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCCeEEEE
Confidence 467777899885 5778999999974 332211 1 3466665 4789999999999999987654443
No 159
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=94.91 E-value=0.15 Score=45.53 Aligned_cols=65 Identities=14% Similarity=0.149 Sum_probs=46.9
Q ss_pred cCCCcCCCeecC----CceEEEEEecEEE-EEEeeC-C-------eEEEecC--CcEEEECCCCeEEEEEcCCceEEEEE
Q 021654 221 KAGSVEPAHHHT----FGHDLVVLQGKKS-VWNLTK-G-------ERFDLTV--GDYLFTPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 221 ~pG~~~p~H~H~----~~e~vyVlsG~l~-v~i~~~-~-------~~~~L~p--GD~v~IP~g~~H~~~n~gd~~~~i~~ 285 (309)
.+|....+|.|. +.+.++|++|++. +.+... + ..+.|.+ +..+|||+|..|.+.+.++...++.+
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a~vly~ 153 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYL 153 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSSEEEEEE
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCCEEEEEe
Confidence 467777899885 5778999999974 332211 1 3366665 47999999999999999976554443
No 160
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=94.83 E-value=0.1 Score=42.04 Aligned_cols=57 Identities=16% Similarity=0.402 Sum_probs=44.0
Q ss_pred eecCCceE--EEEEecEEEEEEeeC------CeEEEecCCcEEEECCCCeEEEEEcCCceEEEEE
Q 021654 229 HHHTFGHD--LVVLQGKKSVWNLTK------GERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 229 H~H~~~e~--vyVlsG~l~v~i~~~------~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~ 285 (309)
|.=..+-+ +.|++|++++....+ .+...+.+|+..++||...|++...+|..+.|-|
T Consensus 32 HnTK~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sdD~~f~leF 96 (119)
T 3dl3_A 32 HNTAVDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSDDAQFNINF 96 (119)
T ss_dssp BCCCTTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECTTCEEEEEE
T ss_pred cCCCCcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECCCeEEEEEE
Confidence 43344555 889999999974321 2567899999999999999999977788887533
No 161
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=94.28 E-value=0.12 Score=48.75 Aligned_cols=58 Identities=22% Similarity=0.207 Sum_probs=46.9
Q ss_pred EcCCCcCCCeecCCceEEEEEecEEEEEEee--------------------------------------CCeEEEecCCc
Q 021654 220 FKAGSVEPAHHHTFGHDLVVLQGKKSVWNLT--------------------------------------KGERFDLTVGD 261 (309)
Q Consensus 220 l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~--------------------------------------~~~~~~L~pGD 261 (309)
-.+|+.++.|..+..-++.++.|+-++.+.- .....+|+|||
T Consensus 190 G~~gs~t~~H~D~~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD 269 (349)
T 3d8c_A 190 GMEGNVTPAHYGEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGD 269 (349)
T ss_dssp ECTTCEEEEECCSEEEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEECTTC
T ss_pred ECCCCCccceECChhcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEECCCC
Confidence 3467778889887777788899998886521 12468999999
Q ss_pred EEEECCCCeEEEEEcC
Q 021654 262 YLFTPAGDVHRVKYYE 277 (309)
Q Consensus 262 ~v~IP~g~~H~~~n~g 277 (309)
.+|||+|-.|.+.+.+
T Consensus 270 ~LyiP~gWwH~V~~l~ 285 (349)
T 3d8c_A 270 VLYIPMYWWHHIESLL 285 (349)
T ss_dssp EEEECTTCEEEEEECT
T ss_pred EEEECCCCcEEEEEcC
Confidence 9999999999999997
No 162
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=93.84 E-value=0.11 Score=44.02 Aligned_cols=50 Identities=18% Similarity=0.108 Sum_probs=36.3
Q ss_pred HHHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCCceEEEEecCchh
Q 021654 28 DALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVG 81 (309)
Q Consensus 28 ~~l~~~l~~~g~ev~d~G~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G 81 (309)
..|.+.|++.|++|++++. ++...+..++.+.... ..+|.-|+--|+|.|
T Consensus 43 ~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~----~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 43 DIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSI----DEVDVIISTGGTGYS 94 (178)
T ss_dssp HHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTC----TTCCEEEEESCCSSS
T ss_pred HHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhc----CCCCEEEecCCcccC
Confidence 4688889999999999996 3455566666666655 567777766677665
No 163
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=93.57 E-value=0.17 Score=49.95 Aligned_cols=53 Identities=21% Similarity=0.241 Sum_probs=42.7
Q ss_pred CCCeecCCceEEEEEecEEEEEEeeC-----------------------CeEEEecCCcEEEECCCCeEEEEEcCC
Q 021654 226 EPAHHHTFGHDLVVLQGKKSVWNLTK-----------------------GERFDLTVGDYLFTPAGDVHRVKYYEE 278 (309)
Q Consensus 226 ~p~H~H~~~e~vyVlsG~l~v~i~~~-----------------------~~~~~L~pGD~v~IP~g~~H~~~n~gd 278 (309)
.++|+-+..-++.-+.|+-++.+... ...+.|+|||.+|||+|.+|...+.++
T Consensus 178 ~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H~~~s~~~ 253 (489)
T 4diq_A 178 FAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIHQAECQDG 253 (489)
T ss_dssp SCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEEEEEBCSS
T ss_pred ccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCceEEEecCC
Confidence 47888888777888888888766321 126899999999999999999999864
No 164
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=93.43 E-value=0.42 Score=41.82 Aligned_cols=61 Identities=10% Similarity=0.038 Sum_probs=45.4
Q ss_pred cCCCcCCCeecC----CceEEEEEecEEEEEEeeCC----------eEEEecC--CcEEEECCCCeEEEEEcCCceEE
Q 021654 221 KAGSVEPAHHHT----FGHDLVVLQGKKSVWNLTKG----------ERFDLTV--GDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 221 ~pG~~~p~H~H~----~~e~vyVlsG~l~v~i~~~~----------~~~~L~p--GD~v~IP~g~~H~~~n~gd~~~~ 282 (309)
.+|....+|.|. +...++|++|++.-.+ +|- ....|.+ +..+|||+|..|.+.+.++...+
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~-VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~a~~ 128 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDVV-VDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDDATL 128 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEEE-ECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTTEEE
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEEE-EECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCCeEE
Confidence 467777899874 6777999999975432 221 2456765 67999999999999999875543
No 165
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=93.35 E-value=0.19 Score=46.29 Aligned_cols=62 Identities=19% Similarity=0.074 Sum_probs=51.4
Q ss_pred EEEcCCCcCCCeecCCceE-EEEE-ecEEEEEEeeCCeEEEecCCcEEEECCC--CeEEEEEcCCce
Q 021654 218 VRFKAGSVEPAHHHTFGHD-LVVL-QGKKSVWNLTKGERFDLTVGDYLFTPAG--DVHRVKYYEETE 280 (309)
Q Consensus 218 ~~l~pG~~~p~H~H~~~e~-vyVl-sG~l~v~i~~~~~~~~L~pGD~v~IP~g--~~H~~~n~gd~~ 280 (309)
+.+.++..+++|.|...|. .|++ +|.++-. +.-+..-.+.|||+-|+-+| +.|+-.|..+.+
T Consensus 45 ~~~~~~~Gf~~HPHrg~EtVTyvl~~G~~~H~-DS~Gn~~~i~~GdvQwMtAG~GI~HsE~~~~~~~ 110 (290)
T 1j1l_A 45 FKGGRPGGFPDHPHRGFETVSYLLEGGSMAHE-DFCGHTGKMNPGDLQWMTAGRGILHAEMPCSEEP 110 (290)
T ss_dssp EEECTTCBEEEEEEBSEEEEEEECSSSCEEEE-ETTSCEEEECTTCEEEEECTTCEEEEEEECSSSC
T ss_pred cccCCCCCCCCCCCCCeEEEEEECcceEEEEe-eCCCCceEECCCcEEEEeCCCCEEEEeEcCCCCC
Confidence 4577888899999999997 8999 9999985 55577899999999999875 579998875433
No 166
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=93.18 E-value=0.7 Score=39.34 Aligned_cols=74 Identities=16% Similarity=0.238 Sum_probs=53.4
Q ss_pred eEEEEEcCCCcCCCeecCCceEEEEEecEE-EEEEee-CCeE--EE----ecCCcE--EEECCCCeEEEEEc-CCceEEE
Q 021654 215 SAIVRFKAGSVEPAHHHTFGHDLVVLQGKK-SVWNLT-KGER--FD----LTVGDY--LFTPAGDVHRVKYY-EETEFFI 283 (309)
Q Consensus 215 ~~~~~l~pG~~~p~H~H~~~e~vyVlsG~l-~v~i~~-~~~~--~~----L~pGD~--v~IP~g~~H~~~n~-gd~~~~i 283 (309)
..++-+.+|..+.+|....+|..+...|.. ++.+.. +++. .. +..|+. ++||+|..+..++. ++-.++-
T Consensus 51 ~IYfLL~~g~~S~~HRv~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~Ge~pQ~vVP~G~wqaa~~~~g~~~LV~ 130 (170)
T 1yud_A 51 SIYFLLRTGEVSHFHRLTADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAGERPQFLVPKGCIFGSAMNQDGFSLVG 130 (170)
T ss_dssp EEEEEEETTCCEEEEECSSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTTEESCEEECTTCEEEEEESSSSEEEEE
T ss_pred EEEEEECCCCCCeeEEcCCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccCceeEEEECCCCEEEEEECCCCcEEEE
Confidence 367889999988899988888888899974 665422 3433 33 556888 99999999999988 5444444
Q ss_pred EEcCc
Q 021654 284 KWDGR 288 (309)
Q Consensus 284 ~~~~~ 288 (309)
+.+.+
T Consensus 131 C~VaP 135 (170)
T 1yud_A 131 CMVSP 135 (170)
T ss_dssp EEESS
T ss_pred EEECC
Confidence 44443
No 167
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=92.51 E-value=0.38 Score=41.95 Aligned_cols=79 Identities=13% Similarity=-0.010 Sum_probs=56.4
Q ss_pred EEEEEcCCCcCCCeecCCceE---EEEEe--c-EEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEEEEcCcc
Q 021654 216 AIVRFKAGSVEPAHHHTFGHD---LVVLQ--G-KKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWDGRW 289 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~---vyVls--G-~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~~~~~ 289 (309)
.+..+.||+.+++|..+..-. -+.|. . ...+ .++++++..++|.++++.-..+|..+|.++..-++++.-
T Consensus 105 ~fs~L~pG~~I~pH~g~~n~~lR~HL~L~~p~~~~~i--~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~RvvL~~D-- 180 (197)
T 3rcq_A 105 KYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKI--RCANETKTWEEGKVLIFDDSFEHEVWQDASSFRLIFIVD-- 180 (197)
T ss_dssp EEEEECTTEEEEEECCSCTTEEEEEEEEECCSSSEEE--EETTEEECCCBTCEEEECTTSCEEEEECSSSCEEEEEEE--
T ss_pred EEEEeCCCCCcCCeeCCCCCeEEEEEEEEeCCCCcEE--EECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEEEEEEe--
Confidence 556899999999998875433 12222 2 3444 567999999999999999999999999997765554333
Q ss_pred ccccchhHHHH
Q 021654 290 DMFFDEDLEAA 300 (309)
Q Consensus 290 ~i~~~e~~~~~ 300 (309)
+..+++-.+
T Consensus 181 --~~rPdl~~~ 189 (197)
T 3rcq_A 181 --VWHPELTPQ 189 (197)
T ss_dssp --EECTTSCHH
T ss_pred --eeCCCCCHH
Confidence 335655433
No 168
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=92.04 E-value=0.79 Score=41.83 Aligned_cols=69 Identities=16% Similarity=0.092 Sum_probs=52.3
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEe-cC---------CcEEEECCCCeEEEEEcCCceEEEEE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDL-TV---------GDYLFTPAGDVHRVKYYEETEFFIKW 285 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L-~p---------GD~v~IP~g~~H~~~n~gd~~~~i~~ 285 (309)
.++++++|.......-..+--++.|.|+.++. ++++++.+ .. .|++|+|.|..=.+.+.++.++.++.
T Consensus 32 ~~~~L~~Ge~~~~~~~~~E~~iv~l~G~~~V~--~~g~~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~a~~~~~~~v~s 109 (270)
T 2qjv_A 32 DVWQLXAGESITLPSDERERCLVLVAGLASVX--AADSFFYRIGQRMSPFERIPAYSVYLPHHTEAXVTAETDLELAVCS 109 (270)
T ss_dssp EEEEECTTCEEEECCSSEEEEEEEEESCEEEE--ETTEEEEEECCCSSGGGCSCCCEEEECSSCCEEEEESSSEEEEEEE
T ss_pred EEEEecCCCEEEecCCCcEEEEEEecceEEEE--ECCEEEeccccccccccCCCCcEEEECCCCEEEEEecCCceEEEEe
Confidence 46788888876655444333388999999994 56888877 32 48999999998889988888877665
Q ss_pred c
Q 021654 286 D 286 (309)
Q Consensus 286 ~ 286 (309)
.
T Consensus 110 A 110 (270)
T 2qjv_A 110 A 110 (270)
T ss_dssp E
T ss_pred e
Confidence 4
No 169
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=92.03 E-value=0.49 Score=46.27 Aligned_cols=64 Identities=23% Similarity=0.199 Sum_probs=48.7
Q ss_pred EEEcCCCcCCCeecCCce--EEEEEecEEEEEEee----------------------------CCeEEEecCCcEEEECC
Q 021654 218 VRFKAGSVEPAHHHTFGH--DLVVLQGKKSVWNLT----------------------------KGERFDLTVGDYLFTPA 267 (309)
Q Consensus 218 ~~l~pG~~~p~H~H~~~e--~vyVlsG~l~v~i~~----------------------------~~~~~~L~pGD~v~IP~ 267 (309)
+--++|+.++.|...... +..+++|+-++.+.- ..-..++.|||.+|||+
T Consensus 236 ~mG~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIPs 315 (447)
T 3kv4_A 236 LMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPT 315 (447)
T ss_dssp EEECTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEECT
T ss_pred EEeCCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecCC
Confidence 344567777888777666 467888888876521 12368999999999999
Q ss_pred CCeEEEEEcCCceE
Q 021654 268 GDVHRVKYYEETEF 281 (309)
Q Consensus 268 g~~H~~~n~gd~~~ 281 (309)
|-.|.+.|..++..
T Consensus 316 GWwH~V~nledsIa 329 (447)
T 3kv4_A 316 GWIHAVLTPVDCLA 329 (447)
T ss_dssp TCEEEEEESSCEEE
T ss_pred CCeEEEecCCCEEE
Confidence 99999999987654
No 170
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=92.02 E-value=0.41 Score=47.31 Aligned_cols=65 Identities=22% Similarity=0.152 Sum_probs=50.0
Q ss_pred EEEEcCCCcCCCeecCCce--EEEEEecEEEEEEeeC----------------------------CeEEEecCCcEEEEC
Q 021654 217 IVRFKAGSVEPAHHHTFGH--DLVVLQGKKSVWNLTK----------------------------GERFDLTVGDYLFTP 266 (309)
Q Consensus 217 ~~~l~pG~~~p~H~H~~~e--~vyVlsG~l~v~i~~~----------------------------~~~~~L~pGD~v~IP 266 (309)
++--.+|+.++.|.++... +..++.|+-++.+.-. .-..++.|||.+|||
T Consensus 270 ~~mG~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIP 349 (488)
T 3kv5_D 270 CLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVP 349 (488)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEEC
T ss_pred EEEcCCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeC
Confidence 3344567888888887776 4688899888866311 236789999999999
Q ss_pred CCCeEEEEEcCCceE
Q 021654 267 AGDVHRVKYYEETEF 281 (309)
Q Consensus 267 ~g~~H~~~n~gd~~~ 281 (309)
+|-.|.+.|..++..
T Consensus 350 sGWwH~V~nledsIa 364 (488)
T 3kv5_D 350 TGWIHAVLTSQDCMA 364 (488)
T ss_dssp TTCEEEEEEEEEEEE
T ss_pred CCceEEeeCCCCeEE
Confidence 999999999976554
No 171
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=91.75 E-value=0.45 Score=45.41 Aligned_cols=29 Identities=24% Similarity=0.297 Sum_probs=25.5
Q ss_pred eEEEecCCcEEEECCCCeEEEEEcCCceE
Q 021654 253 ERFDLTVGDYLFTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 253 ~~~~L~pGD~v~IP~g~~H~~~n~gd~~~ 281 (309)
-+.++.|||.+|||+|-.|.+.|..++..
T Consensus 217 ~ev~l~pGEtLfIPsGWwH~V~nledSIa 245 (371)
T 3k3o_A 217 YKCSVKQGQTLFIPTGWIHAVLTPVDCLA 245 (371)
T ss_dssp EEEEEETTCEEEECTTCEEEEEEEEEEEE
T ss_pred EEEEECCCcEEEeCCCCeEEEecCCCeEE
Confidence 46899999999999999999999876554
No 172
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=91.61 E-value=0.78 Score=43.05 Aligned_cols=28 Identities=25% Similarity=0.254 Sum_probs=25.2
Q ss_pred EEEecCCcEEEECCCCeEEEEEcCCceE
Q 021654 254 RFDLTVGDYLFTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 254 ~~~L~pGD~v~IP~g~~H~~~n~gd~~~ 281 (309)
..+|.|||.+|||+|-.|.+.+.+++..
T Consensus 257 ~~~l~pGd~l~iP~gw~H~v~~~~~sis 284 (336)
T 3k2o_A 257 EILQKPGETVFVPGGWWHVVLNLDTTIA 284 (336)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSCEEE
T ss_pred EEEECCCCEEEeCCCCcEEEecCCCeEE
Confidence 5789999999999999999999987554
No 173
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=90.86 E-value=0.84 Score=44.61 Aligned_cols=64 Identities=23% Similarity=0.269 Sum_probs=47.5
Q ss_pred EEEcCCCcCCCeecCCce--EEEEEecEEEEEEee----------------------------CCeEEEecCCcEEEECC
Q 021654 218 VRFKAGSVEPAHHHTFGH--DLVVLQGKKSVWNLT----------------------------KGERFDLTVGDYLFTPA 267 (309)
Q Consensus 218 ~~l~pG~~~p~H~H~~~e--~vyVlsG~l~v~i~~----------------------------~~~~~~L~pGD~v~IP~ 267 (309)
+--++|+.++.|..+... +..+++|+-++.+.- .....++.|||.+|||+
T Consensus 201 ~mGp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfIPs 280 (451)
T 2yu1_A 201 LMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVIPS 280 (451)
T ss_dssp EEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEECT
T ss_pred EEccCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEeCC
Confidence 334567777888777553 467888888775420 23468899999999999
Q ss_pred CCeEEEEEcCCceE
Q 021654 268 GDVHRVKYYEETEF 281 (309)
Q Consensus 268 g~~H~~~n~gd~~~ 281 (309)
|=.|.+.|..++..
T Consensus 281 GWwH~V~nledsIa 294 (451)
T 2yu1_A 281 GWIHAVYTPTDTLV 294 (451)
T ss_dssp TCEEEEECSSCEEE
T ss_pred CceEEEecCCCeEE
Confidence 99999999987654
No 174
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=90.57 E-value=0.99 Score=34.72 Aligned_cols=50 Identities=10% Similarity=0.191 Sum_probs=40.9
Q ss_pred CceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEE
Q 021654 233 FGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 233 ~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~ 282 (309)
..|..-|++|.+++.+...++.....+|+.+.+|++..-.++....+..+
T Consensus 41 ~~E~M~vvsG~~~V~lpg~~ew~~~~aGesF~Vpans~F~l~v~~~~~Yl 90 (94)
T 2oyz_A 41 APERMTVVKGALVVKRVGEADWTTYSSGESFDVEGNSSFELQVKDATAYL 90 (94)
T ss_dssp SCEEEEEEESEEEEEETTCSSCEEEETTCEEEECSSEEEEEEESSCEEEE
T ss_pred CeEEEEEEEeEEEEEcCCCCcCEEECCCCEEEECCCCEEEEEEcccEeEE
Confidence 56779999999999765344678999999999999999998887665543
No 175
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=90.19 E-value=0.73 Score=44.34 Aligned_cols=61 Identities=25% Similarity=0.217 Sum_probs=42.7
Q ss_pred cCCCcCCCeecCCce--EEEEEecEEEEEEee----------------------------CCeEEEecCCcEEEECCCCe
Q 021654 221 KAGSVEPAHHHTFGH--DLVVLQGKKSVWNLT----------------------------KGERFDLTVGDYLFTPAGDV 270 (309)
Q Consensus 221 ~pG~~~p~H~H~~~e--~vyVlsG~l~v~i~~----------------------------~~~~~~L~pGD~v~IP~g~~ 270 (309)
++|+.++.|..+... +..++.|+-++.+.- ..-...+.|||.+|||+|-.
T Consensus 183 p~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIPsGW~ 262 (397)
T 3kv9_A 183 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWI 262 (397)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeCCCCe
Confidence 445666666665554 356666666665421 12457899999999999999
Q ss_pred EEEEEcCCceE
Q 021654 271 HRVKYYEETEF 281 (309)
Q Consensus 271 H~~~n~gd~~~ 281 (309)
|.+.|..++..
T Consensus 263 H~V~nledSIa 273 (397)
T 3kv9_A 263 HAVLTSQDCMA 273 (397)
T ss_dssp EEEEEEEEEEE
T ss_pred EEccCCcCeEE
Confidence 99999976544
No 176
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=90.06 E-value=0.76 Score=44.13 Aligned_cols=61 Identities=21% Similarity=0.177 Sum_probs=43.0
Q ss_pred cCCCcCCCeecCCce--EEEEEecEEEEEEe----------------------------eCCeEEEecCCcEEEECCCCe
Q 021654 221 KAGSVEPAHHHTFGH--DLVVLQGKKSVWNL----------------------------TKGERFDLTVGDYLFTPAGDV 270 (309)
Q Consensus 221 ~pG~~~p~H~H~~~e--~vyVlsG~l~v~i~----------------------------~~~~~~~L~pGD~v~IP~g~~ 270 (309)
++|+.++.|...... +..+++|+-.+.+. ...-...+.|||.+|||+|-.
T Consensus 182 p~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIPsGWw 261 (392)
T 3pua_A 182 VKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSGWI 261 (392)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeCCCce
Confidence 445666666655544 35667776666542 012468999999999999999
Q ss_pred EEEEEcCCceE
Q 021654 271 HRVKYYEETEF 281 (309)
Q Consensus 271 H~~~n~gd~~~ 281 (309)
|.+.|..++..
T Consensus 262 H~V~nledSIa 272 (392)
T 3pua_A 262 YATLTPVDCLA 272 (392)
T ss_dssp EEEEEEEEEEE
T ss_pred EEEecCCCEEE
Confidence 99999977654
No 177
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=89.39 E-value=1.7 Score=34.44 Aligned_cols=64 Identities=11% Similarity=0.197 Sum_probs=46.7
Q ss_pred EEEcCCCcCCCeec-CCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEE
Q 021654 218 VRFKAGSVEPAHHH-TFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 218 ~~l~pG~~~p~H~H-~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~ 282 (309)
=.+.||. -|.+.. ...|..-|++|.+++.+-...+.....+|+.+.+|++..-.++.......+
T Consensus 42 GVm~PGe-~~YtF~T~~~E~MevvsG~l~V~Lpg~~eW~~~~aGesF~VpanssF~lkv~~~~~Y~ 106 (111)
T 3hqx_A 42 GVILPTE-QPLTFETHVPERMEIISGECRVKIADSTESELFRAGQSFYVPGNSLFKIETDEVLDYV 106 (111)
T ss_dssp EEECCCS-SCEEEECSSCEEEEEEESEEEEEETTCSSCEEEETTCEEEECTTCEEEEECSSCEEEE
T ss_pred EEEeccc-cceEEcCCCcEEEEEEEeEEEEEcCCcccCEEeCCCCEEEECCCCcEEEEECcceeEE
Confidence 3455663 123332 245679999999999775445678899999999999999999887655554
No 178
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=88.73 E-value=0.56 Score=39.27 Aligned_cols=65 Identities=17% Similarity=0.088 Sum_probs=42.9
Q ss_pred CCcEEEEEeCcccHHHH---------HHHHHHHHhC-----CCcEEEecC--CCCcchhHHHHHHhhcCCCCCCCceEEE
Q 021654 11 HPLKIIAGADSFGAELK---------DALVSHLRSL-----NIDVEDLGT--SDYYSIGAEVGRRVSSSDSSDTTTRGLV 74 (309)
Q Consensus 11 ~~mki~i~~D~~g~~lk---------~~l~~~l~~~-----g~ev~d~G~--~~y~~~a~~va~~v~~~~~~~~~~~gi~ 74 (309)
+++||+|-+ .|-++- ..|.+.|++. |++|.+++. ++...+..++.+.+.. ..+|.-|+
T Consensus 4 ~~~rv~Iis--tGde~~~G~~~d~n~~~l~~~l~~~~~~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~----~~~DlVit 77 (167)
T 1uuy_A 4 PEYKVAILT--VSDTVSAGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQKWSDV----DEMDLILT 77 (167)
T ss_dssp CSEEEEEEE--ECHHHHTTSSCCSHHHHHHHHHHHTTTTTTSEEEEEEEEECSCHHHHHHHHHHHHHT----SCCSEEEE
T ss_pred CCcEEEEEE--ECCcccCCCCccCcHHHHHHHHHhccccCCCcEEeEEEEcCCCHHHHHHHHHHHHhc----CCCCEEEE
Confidence 457777765 233321 2455566666 999999985 4566777777777653 35787777
Q ss_pred EecCchh
Q 021654 75 ACGTGVG 81 (309)
Q Consensus 75 ~CgtG~G 81 (309)
--|+|.|
T Consensus 78 tGG~g~g 84 (167)
T 1uuy_A 78 LGGTGFT 84 (167)
T ss_dssp ESCCSSS
T ss_pred CCCCCCC
Confidence 7788776
No 179
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=88.58 E-value=1.2 Score=40.91 Aligned_cols=71 Identities=13% Similarity=0.126 Sum_probs=48.6
Q ss_pred CCeEEEEEcCCCcCCCee-cCCceE-EEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeE-EEEE---cCCceEEEEE
Q 021654 213 PTSAIVRFKAGSVEPAHH-HTFGHD-LVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVH-RVKY---YEETEFFIKW 285 (309)
Q Consensus 213 ~~~~~~~l~pG~~~p~H~-H~~~e~-vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H-~~~n---~gd~~~~i~~ 285 (309)
|....+++++|....... =...|. ++.|.|..++. +++++|.|.+.|++|+|.|..- .+.. .++..+.++.
T Consensus 57 p~~~~l~L~~~~~~~~~~fl~~rE~~iV~lgG~~~V~--vdg~~f~lg~~dalYVp~G~~~v~~as~d~~~~a~fav~s 133 (289)
T 1ywk_A 57 PTTEELEIILDKELGVDYFLERRELGVINIGGPGFIE--IDGAKETMKKQDGYYIGKETKHVRFSSENPDNPAKFYISC 133 (289)
T ss_dssp CSSSCEECCCSGGGTSSSTTTTEEEEEEECSSCEEEE--ETTEEEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEEE
T ss_pred ECCceEEcCCCceecccccCCCcEEEEEEccCeEEEE--ECCEEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEEc
Confidence 334556777775554442 244555 88899999994 5699999999999999999874 4443 2335665543
No 180
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=88.57 E-value=0.99 Score=38.01 Aligned_cols=125 Identities=22% Similarity=0.261 Sum_probs=71.5
Q ss_pred CCCcEEEEE--eCcccHH---HHHHHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCCceEEEEecCchhh
Q 021654 10 PHPLKIIAG--ADSFGAE---LKDALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGV 82 (309)
Q Consensus 10 ~~~mki~i~--~D~~g~~---lk~~l~~~l~~~g~ev~d~G~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~ 82 (309)
.++||++|- +|-.|.- =-..|.+.|++.|++|.+.+. ++...+...+.+++.+ +.+|.-|+--|+|.|-
T Consensus 8 ~~~~~v~Ii~tGdE~g~i~D~n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~----~~~DlVittGG~g~~~ 83 (172)
T 1mkz_A 8 FIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIAS----DDVQVVLITGGTGLTE 83 (172)
T ss_dssp CCCCEEEEEEECSSCCGGGCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHS----SSCCEEEEESCCSSST
T ss_pred CCCCEEEEEEEeCCCCcccCccHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhc----CCCCEEEeCCCCCCCC
Confidence 455776554 4555422 114677888899999999885 4566777777777664 4578888878887762
Q ss_pred -----hhhhc----CCCceEE---EEeCCH--HHHHHhHh----hcCceEeEeccccCCHHHHHH-HHHHHHcCC
Q 021654 83 -----AIFAN----KNPGVFA---TTCLTP--ADALNTRS----INNCNVLAVSGMSTSKESAVE-ILDTWLKTP 138 (309)
Q Consensus 83 -----~iaaN----K~~gira---a~~~~~--~~A~~~r~----hN~aNvl~lg~~~~~~~~a~~-i~~~~l~~~ 138 (309)
...+. +++|..- .+...+ ..+.++|. .++..|++|++--.......+ ++.-+|..-
T Consensus 84 ~D~t~ea~~~~~~~~l~g~~~~~~~i~~~p~G~~~~~a~~~~G~~~~~~v~~LPG~P~~~~~~~~~~v~p~L~~~ 158 (172)
T 1mkz_A 84 GDQAPEALLPLFDREVEGFGEVFRMLSFEEIGTSTLQSRAVAGVANKTLILAMPGSTKACRTAWENIIAPQLDAR 158 (172)
T ss_dssp TCCHHHHHGGGCSEECHHHHHHHHHHHHHHHGGGGGGCCCEEEEETTEEEEEECSSHHHHHHHHHHTHHHHHCTT
T ss_pred CCCHHHHHHHHhcccCCccHHHHHHHhhcccCcceecccccceeECCEEEEECCCCHHHHHHHHHHHHHHHHhhh
Confidence 11111 1112100 000000 11233331 578899999998666555544 456666543
No 181
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=87.38 E-value=0.9 Score=43.46 Aligned_cols=30 Identities=23% Similarity=0.352 Sum_probs=25.8
Q ss_pred CeEEEecCCcEEEECCCCeEEEEEcCCceE
Q 021654 252 GERFDLTVGDYLFTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 252 ~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~ 281 (309)
.-++.-.+||.|+||+|.+|+++|..++.-
T Consensus 292 ~~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~ 321 (392)
T 2ypd_A 292 TCTLIQFLGDAIVLPAGALHQVQNFHSCIQ 321 (392)
T ss_dssp CEEEEEETTCEEEECTTCEEEEEESSEEEE
T ss_pred eEEEEEcCCCEEEecCCCHHHHhcccchhh
Confidence 456788899999999999999999986553
No 182
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=87.22 E-value=1.5 Score=42.92 Aligned_cols=52 Identities=15% Similarity=0.128 Sum_probs=41.0
Q ss_pred cCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEEE
Q 021654 231 HTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 231 H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~ 284 (309)
...++++++-+|++.+ .+.=....+.|||+++||.|+.+++.-.+....+|+
T Consensus 176 aDGD~Livpq~G~l~i--~TEfG~L~v~pgei~VIPRGi~frv~l~~p~Rgyi~ 227 (471)
T 1eyb_A 176 SDGDFLIVPQKGNLLI--YTEFGKMLVQPNEICVIQRGMRFSIDVFEETRGYIL 227 (471)
T ss_dssp SSEEEEEEEEESCEEE--EETTEEEEECTTEEEEECTTCCEEEECSSSEEEEEE
T ss_pred CCCCEEEEEEeCCEEE--EEecccEEeccCCEEEECCccEEEEeeCCCceEEEE
Confidence 3445559999999999 455678999999999999999999987664444443
No 183
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=86.88 E-value=2.1 Score=39.03 Aligned_cols=77 Identities=17% Similarity=0.202 Sum_probs=49.9
Q ss_pred EEcCCCc---CCCeecCCc---------eEEE--EEe--cEEEEEEe----eCCeEEEecCCcEEEECCCCeEEEEEcCC
Q 021654 219 RFKAGSV---EPAHHHTFG---------HDLV--VLQ--GKKSVWNL----TKGERFDLTVGDYLFTPAGDVHRVKYYEE 278 (309)
Q Consensus 219 ~l~pG~~---~p~H~H~~~---------e~vy--Vls--G~l~v~i~----~~~~~~~L~pGD~v~IP~g~~H~~~n~gd 278 (309)
++.||+. .|+|.|+.. |..| +-. |.+--.+. ..++++.+.-||.+.+|+|- |..-....
T Consensus 158 v~tpgG~WSSyPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~de~~~V~~~d~VlvP~Gy-Hp~~a~pG 236 (270)
T 2qjv_A 158 VYTNAGATSSWPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLDECMAVYNRDVVXVPXGY-HPVATIAG 236 (270)
T ss_dssp EEECTTCEESCSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSSEEEEEEETTCEEEESSSB-CCEEECTT
T ss_pred EEcCCCccccCCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCCceEEEEECCCEEecCCCc-CCCcCCCC
Confidence 4667643 499999974 5543 332 33332221 14678999999999999999 99776656
Q ss_pred ceEEEEEc-----Cccccccchh
Q 021654 279 TEFFIKWD-----GRWDMFFDED 296 (309)
Q Consensus 279 ~~~~i~~~-----~~~~i~~~e~ 296 (309)
..++++|. ..|-+..+|+
T Consensus 237 y~~YylwvMaG~~r~~~~~~dP~ 259 (270)
T 2qjv_A 237 YDNYYLNVMAGPLRXWRFTWEEN 259 (270)
T ss_dssp CEEEEEEEEECSSCCCCCEECGG
T ss_pred cccEEEEEEECCCccccccCCCc
Confidence 66666664 3455555554
No 184
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=86.69 E-value=0.97 Score=37.89 Aligned_cols=69 Identities=22% Similarity=0.173 Sum_probs=44.5
Q ss_pred CCCCcEEEEEe--CcccHH---HHHHHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCCceEEEEecCchh
Q 021654 9 APHPLKIIAGA--DSFGAE---LKDALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVG 81 (309)
Q Consensus 9 ~~~~mki~i~~--D~~g~~---lk~~l~~~l~~~g~ev~d~G~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G 81 (309)
..++||++|-+ |-.|.- =-..|.+.|++.|++|.+.+. ++...+...+.+.+.. ..+|.-|+--|+|.|
T Consensus 10 v~~~~rv~Ii~tGdElg~i~Dsn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~----~~~DlVittGG~g~g 85 (169)
T 1y5e_A 10 APKEVRCKIVTISDTRTEETDKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHK----EDVDVVLTNGGTGIT 85 (169)
T ss_dssp --CCCEEEEEEECSSCCTTTCHHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTC----TTCSEEEEECCCSSS
T ss_pred cccCCEEEEEEEcCccCeeccChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhc----CCCCEEEEcCCCCCC
Confidence 34567866654 443310 113567778888999999885 4566677777777653 357877777778776
No 185
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=86.41 E-value=2.7 Score=38.92 Aligned_cols=36 Identities=19% Similarity=0.109 Sum_probs=31.1
Q ss_pred CCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCC
Q 021654 232 TFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGD 269 (309)
Q Consensus 232 ~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~ 269 (309)
.....+.|++|++++. .+++.+.|++||+++||++.
T Consensus 268 ~~~~il~v~~G~~~l~--~~~~~~~l~~G~~~~vpa~~ 303 (319)
T 1qwr_A 268 ESFLICSVIEGSGLLK--YEDKTCPLKKGDHFILPAQM 303 (319)
T ss_dssp SSCEEEEEEEEEEEEE--ETTEEEEEETTCEEEECTTC
T ss_pred CccEEEEEEcCeEEEE--ECCEEEEEcCCcEEEEeCCC
Confidence 4566799999999994 35788999999999999987
No 186
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=86.01 E-value=3.4 Score=33.22 Aligned_cols=110 Identities=8% Similarity=0.088 Sum_probs=57.4
Q ss_pred cEEEEEe---CcccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCCceEEEEecC-chhhhhhhcC
Q 021654 13 LKIIAGA---DSFGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSDTTTRGLVACGT-GVGVAIFANK 88 (309)
Q Consensus 13 mki~i~~---D~~g~~lk~~l~~~l~~~g~ev~d~G~~~y~~~a~~va~~v~~~~~~~~~~~gi~~Cgt-G~G~~iaaNK 88 (309)
-||++++ |.--.- |+.+...|+..||+|+|+|.+--++ .+.+.+.+ ...+ .|.+|.+ +..+..+
T Consensus 4 ~~vvla~~~~d~HdiG-~~~v~~~l~~~G~~Vi~lG~~~p~e---~~v~~a~~----~~~d-~v~lS~~~~~~~~~~--- 71 (137)
T 1ccw_A 4 KTIVLGVIGSDCHAVG-NKILDHAFTNAGFNVVNIGVLSPQE---LFIKAAIE----TKAD-AILVSSLYGQGEIDC--- 71 (137)
T ss_dssp CEEEEEEETTCCCCHH-HHHHHHHHHHTTCEEEEEEEEECHH---HHHHHHHH----HTCS-EEEEEECSSTHHHHH---
T ss_pred CEEEEEeCCCchhHHH-HHHHHHHHHHCCCEEEECCCCCCHH---HHHHHHHh----cCCC-EEEEEecCcCcHHHH---
Confidence 3677775 432333 4578888999999999999843332 23333332 2233 4555543 3333211
Q ss_pred CCceEEEEeCCHHHHHHhHh--hcCceEeEeccccCCHHHHHHHHHHHHcCCCCCCCCC
Q 021654 89 NPGVFATTCLTPADALNTRS--INNCNVLAVSGMSTSKESAVEILDTWLKTPFKAPCPA 145 (309)
Q Consensus 89 ~~giraa~~~~~~~A~~~r~--hN~aNvl~lg~~~~~~~~a~~i~~~~l~~~f~~~~p~ 145 (309)
.+ ..+..|+ .++.-|++=|..++.++...+.-+.+-...++.-++.
T Consensus 72 ---------~~--~i~~l~~~g~~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~d~~~~~ 119 (137)
T 1ccw_A 72 ---------KG--LRQKCDEAGLEGILLYVGGNIVVGKQHWPDVEKRFKDMGYDRVYAP 119 (137)
T ss_dssp ---------TT--HHHHHHHTTCTTCEEEEEESCSSSSCCHHHHHHHHHHTTCSEECCT
T ss_pred ---------HH--HHHHHHhcCCCCCEEEEECCCcCchHhhhhhHHHHHHCCCCEEECC
Confidence 11 2223333 2355565544446665544444555656666655533
No 187
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=85.63 E-value=1.2 Score=37.78 Aligned_cols=48 Identities=17% Similarity=0.171 Sum_probs=34.8
Q ss_pred HHHHHHH---hCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCCceEEEEecCchh
Q 021654 29 ALVSHLR---SLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVG 81 (309)
Q Consensus 29 ~l~~~l~---~~g~ev~d~G~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G 81 (309)
.|.+.|+ +.|++| +++. ++...+...+.+.+.+ ..+|.-|+--|+|.|
T Consensus 29 ~l~~~l~~l~~~G~~v-~~~iv~Dd~~~I~~~l~~~~~~----~~~DlVittGG~g~g 81 (178)
T 2pbq_A 29 AIIDYLKDVIITPFEV-EYRVIPDERDLIEKTLIELADE----KGCSLILTTGGTGPA 81 (178)
T ss_dssp HHHHHHHHHBCSCCEE-EEEEECSCHHHHHHHHHHHHHT----SCCSEEEEESCCSSS
T ss_pred HHHHHHHHHHhCCCEE-EEEEcCCCHHHHHHHHHHHHhc----CCCCEEEECCCCCCC
Confidence 5566566 899999 8884 4566677777777653 357888888888877
No 188
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=84.76 E-value=2.4 Score=42.11 Aligned_cols=28 Identities=29% Similarity=0.355 Sum_probs=25.0
Q ss_pred EEEecCCcEEEECCCCeEEEEEcCCceE
Q 021654 254 RFDLTVGDYLFTPAGDVHRVKYYEETEF 281 (309)
Q Consensus 254 ~~~L~pGD~v~IP~g~~H~~~n~gd~~~ 281 (309)
..++.||+.+|||+|-.|.+.|+.++.+
T Consensus 367 ~v~l~pGEtlfIPsGW~HaV~tleDSIa 394 (528)
T 3pur_A 367 RVVIKEGQTLLIPAGWIHAVLTPVDSLV 394 (528)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEEEEEE
T ss_pred EEEECCCCEEEecCCceEEEecCCCeEE
Confidence 5789999999999999999999977644
No 189
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=84.28 E-value=4.6 Score=36.32 Aligned_cols=65 Identities=20% Similarity=0.136 Sum_probs=44.8
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEee-CCeEEEecCCcEEEECCCCeEEEEEcCCceEE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLT-KGERFDLTVGDYLFTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~-~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~ 282 (309)
..+++++|...........-.+||++|++++ +. +++...|.+||.+.+..+..=.+.+.++..++
T Consensus 185 ~~~~L~~g~~~~~~~~~~~~~l~v~~G~v~v--~g~~~~~~~l~~gd~~~l~~~~~l~l~a~~~a~~L 250 (256)
T 2vec_A 185 HHIVLDKGESANFQLHGPRAYLQSIHGKFHA--LTHHEEKAALTCGDGAFIRDEANITLVADSPLRAL 250 (256)
T ss_dssp EEEEECTTCEEEEECSSSEEEEEEEESCEEE--EETTEEEEEECTTCEEEEESCSEEEEEESSSEEEE
T ss_pred EEEEECCCCEEEEecCCCeEEEEEEECEEEE--CCccccceEECCCCEEEECCCCeEEEEeCCCCEEE
Confidence 4467888877644433323669999999998 31 12346799999999988776677776555554
No 190
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=84.08 E-value=0.23 Score=38.79 Aligned_cols=48 Identities=15% Similarity=0.292 Sum_probs=31.9
Q ss_pred eEEEEecCchhhhhhhcCCCc----------eEEEEeCCHHHHHHhHhhcCceEeEeccccCC
Q 021654 71 RGLVACGTGVGVAIFANKNPG----------VFATTCLTPADALNTRSINNCNVLAVSGMSTS 123 (309)
Q Consensus 71 ~gi~~CgtG~G~~iaaNK~~g----------iraa~~~~~~~A~~~r~hN~aNvl~lg~~~~~ 123 (309)
+-+++||+|+|.||.++|++- |.+.-..+... ...++.++.++..+-.
T Consensus 6 kIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~~~~~~~~-----~~~~~D~Ii~t~~l~~ 63 (109)
T 2l2q_A 6 NILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAIAETRLSE-----VVDRFDVVLLAPQSRF 63 (109)
T ss_dssp EEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEECSTTHHH-----HTTTCSEEEECSCCSS
T ss_pred EEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEecHHHHHh-----hcCCCCEEEECCccHH
Confidence 579999999999999998864 22222222221 2467788877776643
No 191
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=83.78 E-value=1.5 Score=36.55 Aligned_cols=50 Identities=16% Similarity=0.052 Sum_probs=37.6
Q ss_pred HHHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCCceEEEEecCchh
Q 021654 28 DALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVG 81 (309)
Q Consensus 28 ~~l~~~l~~~g~ev~d~G~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G 81 (309)
..|.+.|++.|++|.+++. ++...+...+.+.+.. ..+|.-|+--|||.|
T Consensus 24 ~~l~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~----~~~DlVittGG~g~g 75 (164)
T 2is8_A 24 LAIREVLAGGPFEVAAYELVPDEPPMIKKVLRLWADR----EGLDLILTNGGTGLA 75 (164)
T ss_dssp HHHHHHHTTSSEEEEEEEEECSCHHHHHHHHHHHHHT----SCCSEEEEESCCSSS
T ss_pred HHHHHHHHHCCCeEeEEEEcCCCHHHHHHHHHHHHhc----CCCCEEEEcCCCCCC
Confidence 3577778899999999885 4566677777777663 357888888888876
No 192
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=83.67 E-value=3.4 Score=34.37 Aligned_cols=119 Identities=11% Similarity=0.042 Sum_probs=67.2
Q ss_pred CCcEEEEEeCccc----HHHHHHHHHHHHhCCCcEEEe--cC--------CCCcc---hhHHHHHHhhcCCCCCCCceEE
Q 021654 11 HPLKIIAGADSFG----AELKDALVSHLRSLNIDVEDL--GT--------SDYYS---IGAEVGRRVSSSDSSDTTTRGL 73 (309)
Q Consensus 11 ~~mki~i~~D~~g----~~lk~~l~~~l~~~g~ev~d~--G~--------~~y~~---~a~~va~~v~~~~~~~~~~~gi 73 (309)
++|||.+++=-.| ..+-+.|++.|++.| +|.+. +. ..+.. +...=-+.|.+ +|-.|
T Consensus 1 m~mkIYlAGP~f~~~e~~~~~~~i~~~L~~~G-~Vl~~hv~~~~l~~~g~~~~~~~~~i~~~d~~~i~~------aD~vv 73 (152)
T 4fyk_A 1 MRRSVYFCGSIRGGREDQALYARIVSRLRRYG-KVLTEHVADAELEPLGEEAAGGDQFIHEQNLNWLQQ------ADVVV 73 (152)
T ss_dssp --CEEEEECCSTTCCTTHHHHHHHHHHHTTTS-EECCCC-------------CCCHHHHHHHHHHHHHH------CSEEE
T ss_pred CCceEEEECCCCCcHHHHHHHHHHHHHHHHcC-cccccccCchhhhhccccccCCHHHHHHHHHHHHHH------CCEEE
Confidence 4689999976555 357789999999999 77531 21 10111 22222333443 56777
Q ss_pred EE-----ecCchhhhhhhcCCCceEEEEeCC---HHHHHHhHhhcCceEeEeccccCCHHHHHHHHHHHHcCCC
Q 021654 74 VA-----CGTGVGVAIFANKNPGVFATTCLT---PADALNTRSINNCNVLAVSGMSTSKESAVEILDTWLKTPF 139 (309)
Q Consensus 74 ~~-----CgtG~G~~iaaNK~~giraa~~~~---~~~A~~~r~hN~aNvl~lg~~~~~~~~a~~i~~~~l~~~f 139 (309)
.+ +||+.=+..|.-+=+=|.+-...+ ..+|.+.-.++..|+-+.--.- +...+|++.||.+..
T Consensus 74 A~l~~~d~Gt~~EiG~A~algkPV~~l~~~~~~~~ls~mi~G~~~~~~~~~~~Y~~---~el~~il~~f~~~~~ 144 (152)
T 4fyk_A 74 AEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAE---GEVETMLDRYFEAYL 144 (152)
T ss_dssp EECSSCCHHHHHHHHHHHHTTCCEEEEECGGGSCCCCHHHHHHCCSSSEEEEECCT---TCHHHHHHHHHC---
T ss_pred EeCCCCCCCHHHHHHHHHHcCCeEEEEEeCCccchhHHHHcCCCCCCeEEEEEecH---HHHHHHHHHHHHhhH
Confidence 76 455533333333333454444322 2355555556558888876663 888999999998754
No 193
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=83.25 E-value=0.73 Score=42.50 Aligned_cols=22 Identities=23% Similarity=0.211 Sum_probs=19.7
Q ss_pred eEEEecCCcEEEECCCCeEEEE
Q 021654 253 ERFDLTVGDYLFTPAGDVHRVK 274 (309)
Q Consensus 253 ~~~~L~pGD~v~IP~g~~H~~~ 274 (309)
..+.|+|||++|+|+|++|.+-
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~ 179 (300)
T 1zx5_A 158 NTFETTPYDTFVIRPGIPHAGE 179 (300)
T ss_dssp EEEECCTTCEEEECTTCCEEEE
T ss_pred ceeECCCCCEEEcCCCCceEcC
Confidence 4688999999999999999874
No 194
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=82.99 E-value=0.71 Score=42.57 Aligned_cols=69 Identities=13% Similarity=0.067 Sum_probs=44.1
Q ss_pred EEEcCCCcCCCeecCCceEEEEEecEEEE----------EEeeCCeEEEecCCcEEEECCCCeEEEEEcCCce-EEEEEc
Q 021654 218 VRFKAGSVEPAHHHTFGHDLVVLQGKKSV----------WNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETE-FFIKWD 286 (309)
Q Consensus 218 ~~l~pG~~~p~H~H~~~e~vyVlsG~l~v----------~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~-~~i~~~ 286 (309)
+++.||+.+.+|.-+.. .....+|..++ .+.++++.+.+++|++.++....+|++.|.++.. +.++++
T Consensus 96 lrL~PG~~I~~HrD~~~-l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~GE~w~~d~~~~H~v~N~g~~~RIhLv~D 174 (290)
T 1e5r_A 96 SRNLKNAIVIPHRDFVE-LDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRPGEIWFLDAATVHSAVNFSEISRQSLCVD 174 (290)
T ss_dssp EEEEESEEEEEECCC---------CBCCEEEECSCCTTEEEEETTEEECCCTTEEEECCTTSCEEEEESSSSCCCEEEEE
T ss_pred EEeCCCCEeeCccCccc-cccccCCceEEEeeEecCCCcEEEECCEEEecCCCCEEEEcCCCeeEEEcCCCCCeEEEEEE
Confidence 37788888777755411 01011222222 2246799999999999999999999999998643 444443
Q ss_pred C
Q 021654 287 G 287 (309)
Q Consensus 287 ~ 287 (309)
.
T Consensus 175 ~ 175 (290)
T 1e5r_A 175 F 175 (290)
T ss_dssp E
T ss_pred e
Confidence 3
No 195
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=82.52 E-value=6.2 Score=35.09 Aligned_cols=63 Identities=10% Similarity=-0.001 Sum_probs=44.5
Q ss_pred EEEEEcCCCcCCCeecC-CceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCceEEEE
Q 021654 216 AIVRFKAGSVEPAHHHT-FGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~-~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~ 284 (309)
..+++++|........+ ..-++||++|++++ + ++ .|.+||.+.+..+..=.+.+.++..+++.
T Consensus 163 ~~~~l~~g~~~~~~~~~~~~~~~~v~~G~v~v--~--g~--~l~~gd~~~~~~~~~l~l~a~~~a~~Ll~ 226 (242)
T 1tq5_A 163 YRWALLKDEQSVHQIAAERRVWIQVVKGNVTI--N--GV--KASTSDGLAIWDEQAISIHADSDSEVLLF 226 (242)
T ss_dssp EEEEECTTCEEEECCCTTCEEEEEEEESEEEE--T--TE--EEETTCEEEEESCSCEEEEESSSEEEEEE
T ss_pred EEEEECCCCEEEeecCCCcEEEEEEccCcEEE--C--CE--EeCCCCEEEECCCCeEEEEeCCCCEEEEE
Confidence 45678888776333322 34459999999998 3 43 69999999998877667777666655443
No 196
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=82.38 E-value=3.7 Score=37.31 Aligned_cols=63 Identities=14% Similarity=0.169 Sum_probs=43.6
Q ss_pred EEEEEcCCCcCCCeecC-CceEEEEEecEEEEEEeeCCeEEEecCCcEEEECC-C----CeEEEEEcCCceEE
Q 021654 216 AIVRFKAGSVEPAHHHT-FGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPA-G----DVHRVKYYEETEFF 282 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~-~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~-g----~~H~~~n~gd~~~~ 282 (309)
..+++++|........+ ..-++||++|.+++ + +....|.+||.+++.. + ..-.+.+.++..++
T Consensus 170 ~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v--~--g~~~~l~~~d~~~~~~~~~~~~~~l~l~a~~~a~~L 238 (277)
T 2p17_A 170 VEMIVEPGTTVVQDLPGHYNGFLYILEGSGVF--G--ADNIEGKAGQALFFSRHNRGEETELNVTAREKLRLL 238 (277)
T ss_dssp EEEEECTTCEEEEEEETTCEEEEEEEESEEEE--T--TTTEEEETTEEEEECCCCTTCEEEEEEEESSSEEEE
T ss_pred EEEEECCCCEEEeccCCCCEEEEEEEeCeEEE--C--CCceEeCCCcEEEEcCCCCCccceEEEEeCCCcEEE
Confidence 45688898877544432 34569999999988 4 4224699999999986 6 44566776665544
No 197
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=82.28 E-value=3.3 Score=32.49 Aligned_cols=47 Identities=21% Similarity=0.277 Sum_probs=38.0
Q ss_pred CceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcCCc
Q 021654 233 FGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEET 279 (309)
Q Consensus 233 ~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~gd~ 279 (309)
..|..-|++|.+++.+-...+.....+|+.+.+|++..-.++....+
T Consensus 54 ~~E~MevvsG~l~V~LpG~~eW~~~~aGesF~VpanssF~lkv~~~t 100 (106)
T 3eo6_A 54 VAETIRVLSGMAYYHAEGANDVQELHAGDSMVIPANQSYRLEVMEPL 100 (106)
T ss_dssp SCEEEEEEEEEEEEECTTCSSCEEEETTCEEEECSSSCEEEEEEEEE
T ss_pred CcEEEEEEEeEEEEECCCCccCEEECCCCEEEECCCCcEEEEECceE
Confidence 45678999999999765334678999999999999999888876433
No 198
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=82.01 E-value=0.87 Score=42.33 Aligned_cols=21 Identities=29% Similarity=0.849 Sum_probs=19.6
Q ss_pred eEEEecCCcEEEECCCCeEEE
Q 021654 253 ERFDLTVGDYLFTPAGDVHRV 273 (309)
Q Consensus 253 ~~~~L~pGD~v~IP~g~~H~~ 273 (309)
..+.|+|||++|+|+|++|.+
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~ 178 (319)
T 1qwr_A 158 RRIKIKPGDFYYVPSGTLHAL 178 (319)
T ss_dssp EEEECCTTCEEEECTTCCEEE
T ss_pred eEEEcCCCCEEEcCCCCceEe
Confidence 679999999999999999985
No 199
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=81.55 E-value=0.43 Score=37.22 Aligned_cols=20 Identities=10% Similarity=0.207 Sum_probs=18.2
Q ss_pred eEEEEecCchhhhhhhcCCC
Q 021654 71 RGLVACGTGVGVAIFANKNP 90 (309)
Q Consensus 71 ~gi~~CgtG~G~~iaaNK~~ 90 (309)
+-+++||+|++.|+.++|++
T Consensus 5 kIll~Cg~G~sTS~l~~k~~ 24 (106)
T 1e2b_A 5 HIYLFSSAGMSTSLLVSKMR 24 (106)
T ss_dssp EEEEECSSSTTTHHHHHHHH
T ss_pred EEEEECCCchhHHHHHHHHH
Confidence 57899999999999999875
No 200
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=80.05 E-value=6.4 Score=38.18 Aligned_cols=45 Identities=13% Similarity=0.165 Sum_probs=34.7
Q ss_pred ecCCceEEEEEecEEEEEEeeCCe-E--EEecCCcEEEECCCCeEEEEEc
Q 021654 230 HHTFGHDLVVLQGKKSVWNLTKGE-R--FDLTVGDYLFTPAGDVHRVKYY 276 (309)
Q Consensus 230 ~H~~~e~vyVlsG~l~v~i~~~~~-~--~~L~pGD~v~IP~g~~H~~~n~ 276 (309)
.+.....++|++|++++.. ++. . ..|++|+++|||++..-.+.+.
T Consensus 376 ~~~~~~illv~~G~g~i~~--~~~~~~~~~l~~G~~~fvpa~~~~~i~g~ 423 (440)
T 1pmi_A 376 GLNGPSIVIATNGKGTIQI--TGDDSTKQKIDTGYVFFVAPGSSIELTAD 423 (440)
T ss_dssp CCSSCEEEEEEESEEEEEE--TTCGGGCEEEETTCEEEECTTCCEEEEEC
T ss_pred cCCCcEEEEEEeCeEEEEe--CCcccceEEeccCCEEEEeCCCcEEEEEe
Confidence 3456778999999999953 333 3 7999999999999966566654
No 201
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=80.01 E-value=3 Score=39.91 Aligned_cols=38 Identities=18% Similarity=0.270 Sum_probs=31.8
Q ss_pred ecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCC
Q 021654 230 HHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGD 269 (309)
Q Consensus 230 ~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~ 269 (309)
.+.....+.|++|++++. .++++..|++|+++|||++.
T Consensus 339 ~~~~~~il~v~~G~~~l~--~~~~~~~l~~G~~~fvpa~~ 376 (394)
T 2wfp_A 339 GQHSAAILFCVEGEAVLR--KDEQRLVLKPGESAFIGADE 376 (394)
T ss_dssp CCSSCEEEEEEEEEEEEE--ETTEEEEECTTCEEEECGGG
T ss_pred cCCCcEEEEEEeceEEEE--ECCeEEEEccCcEEEEeCCC
Confidence 455667899999999984 45678999999999999985
No 202
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=79.62 E-value=4.2 Score=37.23 Aligned_cols=52 Identities=13% Similarity=0.222 Sum_probs=38.4
Q ss_pred CCceE-EEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEcC----CceEEEEE
Q 021654 232 TFGHD-LVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYE----ETEFFIKW 285 (309)
Q Consensus 232 ~~~e~-vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~g----d~~~~i~~ 285 (309)
...|. ++.+.|..++. +++++|.|.+-|++|+|.|......... +..+.++.
T Consensus 77 ~~rE~~iV~l~G~~~V~--vdG~~f~lg~~dalYVp~g~~~v~~as~da~~~a~fav~s 133 (282)
T 1xru_A 77 ERRELGVINIGGAGTIT--VDGQCYEIGHRDALYVGKGAKEVVFASIDTGTPAKFYYNC 133 (282)
T ss_dssp TTEEEEEEECSSCEEEE--ETTEEEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEEE
T ss_pred CCcEEEEEEccCeEEEE--ECCEEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEEc
Confidence 44555 88899999994 5689999999999999999974444433 35555443
No 203
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=79.13 E-value=0.53 Score=36.99 Aligned_cols=23 Identities=26% Similarity=0.420 Sum_probs=18.2
Q ss_pred CCceEEEEecCchhhhh-hhcCCC
Q 021654 68 TTTRGLVACGTGVGVAI-FANKNP 90 (309)
Q Consensus 68 ~~~~gi~~CgtG~G~~i-aaNK~~ 90 (309)
.--+.+++||+|+|.|. +++|++
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~ 43 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIK 43 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHH
T ss_pred cccEEEEECCCCHHHHHHHHHHHH
Confidence 34579999999999988 577663
No 204
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=78.25 E-value=1.5 Score=42.09 Aligned_cols=22 Identities=23% Similarity=0.244 Sum_probs=19.7
Q ss_pred eEEEecCCcEEEECCCCeEEEE
Q 021654 253 ERFDLTVGDYLFTPAGDVHRVK 274 (309)
Q Consensus 253 ~~~~L~pGD~v~IP~g~~H~~~ 274 (309)
..+.|+|||++|+|+|++|.+-
T Consensus 240 n~v~l~pGd~~fipAG~~HAy~ 261 (394)
T 2wfp_A 240 NVVKLNPGEAMFLFAETPHAYL 261 (394)
T ss_dssp EEEEECTTCEEEECTTCCEEEE
T ss_pred eEEECCCCCEEEcCCCCceEcC
Confidence 3679999999999999999864
No 205
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=77.72 E-value=18 Score=34.01 Aligned_cols=73 Identities=15% Similarity=0.055 Sum_probs=44.1
Q ss_pred EEEEEcCCCcC-CCeecCCceEEEEEecEEEEEEeeCCe--EEEecCCcEEEECCCCeEEEEEcCCceEEEEEcCccc
Q 021654 216 AIVRFKAGSVE-PAHHHTFGHDLVVLQGKKSVWNLTKGE--RFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWDGRWD 290 (309)
Q Consensus 216 ~~~~l~pG~~~-p~H~H~~~e~vyVlsG~l~v~i~~~~~--~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~~~~~~ 290 (309)
..+++..+... ..-.|. ...+.|++|.++++-+..++ ...|+|+|+.|+.|-++|+|... .+.+.+-..+++.
T Consensus 337 ~~l~Vd~~d~~~DL~d~g-e~hY~v~~G~lTL~W~~~dGt~~a~L~PDgSAwv~PFV~H~w~G~-GtVlkLgsG~hl~ 412 (443)
T 3g7d_A 337 SFLRVDADGRGADLIDHA-ENHYVVTEGRLTLEWDGPDGPASVELEPDGSAWTGPFVRHRWHGT-GTVLKFGSGAHLG 412 (443)
T ss_dssp EEEEEC------CBCCSS-EEEEEEEESCEEEEEEETTEEEEEEECTTCEEEECTTCCEEEESS-EEEEEEEECSTTC
T ss_pred EEEEecCCCcchhhhhcc-cceEEEecCceEEEecCCCCccceEECCCCceeecccccccccCC-ceEEEeccCCccc
Confidence 45566543221 222232 33366899999994343333 47899999999999999999832 2344455555554
No 206
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=77.14 E-value=2.7 Score=35.58 Aligned_cols=51 Identities=18% Similarity=0.094 Sum_probs=37.8
Q ss_pred HHHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCCceEEEEecCchhh
Q 021654 28 DALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGV 82 (309)
Q Consensus 28 ~~l~~~l~~~g~ev~d~G~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~ 82 (309)
..|.+.|++.|++|.+++. +++..+...+.+.+.+ ..+|.-|+--|||.|-
T Consensus 43 ~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~----~~~DlVittGG~s~g~ 95 (178)
T 2pjk_A 43 DIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSI----DEVDVIISTGGTGYSP 95 (178)
T ss_dssp HHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTC----TTCCEEEEESCCSSST
T ss_pred HHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhc----CCCCEEEECCCCCCCC
Confidence 3677888999999999985 4566677777776654 3478777777777764
No 207
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=76.42 E-value=1.2 Score=37.14 Aligned_cols=57 Identities=12% Similarity=0.156 Sum_probs=35.8
Q ss_pred CcccHHHHHHHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCCceEEEEecCchh
Q 021654 20 DSFGAELKDALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVG 81 (309)
Q Consensus 20 D~~g~~lk~~l~~~l~~~g~ev~d~G~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G 81 (309)
|..+.-|++.+...|++.|++|..++. ++...+...+.+.+.+ .+|.-|+--|+|.|
T Consensus 24 D~n~~~l~~~~~~~l~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~-----~~DlVittGG~g~~ 82 (167)
T 2g2c_A 24 NKALPLLQRLMSDELQDYSYELISEVVVPEGYDTVVEAIATALKQ-----GARFIITAGGTGIR 82 (167)
T ss_dssp CCHHHHHHHHHCC----CEEEEEEEEEECSSHHHHHHHHHHHHHT-----TCSEEEEESCCSSS
T ss_pred ccHHHHHHHhHHhHHHHCCCEEeEEEEeCCCHHHHHHHHHHHHhC-----CCCEEEECCCCCCC
Confidence 444444444433338999999999885 4566677777776653 37877777788776
No 208
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=76.06 E-value=4 Score=35.14 Aligned_cols=49 Identities=20% Similarity=0.079 Sum_probs=36.1
Q ss_pred HHHHHHHhCCCc--EEEecC--CCCcchhHHHHHHhhcCCCCCCCceEEEEecCchh
Q 021654 29 ALVSHLRSLNID--VEDLGT--SDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVG 81 (309)
Q Consensus 29 ~l~~~l~~~g~e--v~d~G~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G 81 (309)
.|.+.|++.|++ +.+.+. ++...+...+.+.+.. ..+|.-|+--|||.|
T Consensus 27 ~L~~~L~~~G~~~~v~~~~iV~Dd~~~I~~al~~a~~~----~~~DlVitTGGtg~g 79 (195)
T 1di6_A 27 ALEEWLTSALTTPFELETRLIPDEQAIIEQTLCELVDE----MSCHLVLTTGGTGPA 79 (195)
T ss_dssp HHHHHHHHHBCSCEEEEEEEEESCHHHHHHHHHHHHHT----SCCSEEEEESCCSSS
T ss_pred HHHHHHHHcCCCCceEEEEEeCCCHHHHHHHHHHHHhc----CCCCEEEECCCCCCC
Confidence 566777888998 777775 4566677777777664 467888888888877
No 209
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=75.71 E-value=3.2 Score=38.10 Aligned_cols=36 Identities=22% Similarity=0.099 Sum_probs=30.2
Q ss_pred CCc-eEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCe
Q 021654 232 TFG-HDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDV 270 (309)
Q Consensus 232 ~~~-e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~ 270 (309)
... ..+.|++| +++. .+++...|++|+++++|++..
T Consensus 246 ~~~~~il~v~~G-~~i~--~~~~~~~l~~G~~~~ipa~~~ 282 (300)
T 1zx5_A 246 GGVMNILYAAEG-YFIL--RGKETADLHRGYSCLVPASTD 282 (300)
T ss_dssp CSBCEEEEEEES-CEEE--ESSSEEEECTTCEEEECTTCC
T ss_pred CCceEEEEEccc-EEEE--eCCeEEEEccceEEEEeCCCc
Confidence 455 78899999 9884 357788999999999999884
No 210
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp}
Probab=73.15 E-value=5.2 Score=38.61 Aligned_cols=43 Identities=40% Similarity=0.397 Sum_probs=36.0
Q ss_pred EEEEEeCc--ccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHH
Q 021654 14 KIIAGADS--FGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEV 56 (309)
Q Consensus 14 ki~i~~D~--~g~~lk~~l~~~l~~~g~ev~d~G~~~y~~~a~~v 56 (309)
+|+||.|. ++..|++++.+-|.+.|.+|+|+|.-.-|.++..+
T Consensus 43 ~VvVG~D~R~ss~~l~~a~~~gl~s~G~~V~~~g~~pTP~~~~av 87 (443)
T 3i3w_A 43 FVIVGQDTRSSGGFLKFALVSGLNAAGIDVLDLGVVPTPVVAFMT 87 (443)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHHHHHTCEEEEEEECCHHHHHHHH
T ss_pred eEEEEeCCCcCHHHHHHHHHHHHHHCCCeEEEeCCCCHHHHHHHH
Confidence 79999994 57789999999999999999999976666555544
No 211
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=72.92 E-value=22 Score=29.61 Aligned_cols=64 Identities=23% Similarity=0.200 Sum_probs=42.0
Q ss_pred EEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeE---EEecCCcEEEECCCCeEEEEEcCCceEEE
Q 021654 218 VRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGER---FDLTVGDYLFTPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 218 ~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~---~~L~pGD~v~IP~g~~H~~~n~gd~~~~i 283 (309)
.++++|...-..-.+....++|++|.+.+....+|+. ..+.|||++= ....+.+.+.+++.++.
T Consensus 26 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~fG--~~~~~~~~A~~~~~v~~ 92 (222)
T 1ft9_A 26 KIHAKGSLVCTGEGDENGVFVVVDGRLRVYLVGEEREISLFYLTSGDMFC--MHSGCLVEATERTEVRF 92 (222)
T ss_dssp EEECTTCEEECTTCCCCCEEEEEESEEEEEEEETTEEEEEEEEETTCEEE--SCSSCEEEESSCEEEEE
T ss_pred EEECCCCEEECCCCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEec--CCCCEEEEEccceEEEE
Confidence 4555665543333345567899999999854444554 5678999877 44556778877777653
No 212
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis}
Probab=72.81 E-value=6.4 Score=38.33 Aligned_cols=46 Identities=30% Similarity=0.286 Sum_probs=37.7
Q ss_pred CcEEEEEeC--cccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHH
Q 021654 12 PLKIIAGAD--SFGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVG 57 (309)
Q Consensus 12 ~mki~i~~D--~~g~~lk~~l~~~l~~~g~ev~d~G~~~y~~~a~~va 57 (309)
.-+|+||.| +++-.+++.+.+-|.+.|.+|+|+|.-.-|-++..+-
T Consensus 61 ~~~VvIG~D~R~ss~~~~~a~a~gl~s~Gi~V~~~g~~pTP~l~fav~ 108 (469)
T 3pdk_A 61 RPKVIIGRDTRISGHMLEGALVAGLLSTGAEVMRLGVISTPGVAYLTK 108 (469)
T ss_dssp SCEEEEEECSCTTHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHHHH
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHHCCCEEEEeCCCChHHHHHHHH
Confidence 347999999 4677899999999999999999999766666555543
No 213
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=72.73 E-value=2.9 Score=40.68 Aligned_cols=22 Identities=27% Similarity=0.357 Sum_probs=19.6
Q ss_pred EEEecCCcEEEECCCCeEEEEE
Q 021654 254 RFDLTVGDYLFTPAGDVHRVKY 275 (309)
Q Consensus 254 ~~~L~pGD~v~IP~g~~H~~~n 275 (309)
...|+|||++|+|+|++|.+..
T Consensus 267 ~v~L~pGea~flpAg~~HAYl~ 288 (440)
T 1pmi_A 267 HVGLNKGEAMFLQAKDPHAYIS 288 (440)
T ss_dssp EEEECTTCEEEECTTCCEEEEE
T ss_pred eEecCCCCEEecCCCCccccCC
Confidence 6789999999999999998654
No 214
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=72.48 E-value=23 Score=31.51 Aligned_cols=119 Identities=18% Similarity=0.252 Sum_probs=71.2
Q ss_pred CCCcEEEEEe--CcccHH-HHHHHHHHHHhCCCc------EEEecCCCCcchhHHHHHHhhcCCCCCCCceEEEEecCch
Q 021654 10 PHPLKIIAGA--DSFGAE-LKDALVSHLRSLNID------VEDLGTSDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGV 80 (309)
Q Consensus 10 ~~~mki~i~~--D~~g~~-lk~~l~~~l~~~g~e------v~d~G~~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~ 80 (309)
.+..||.|.. +|-.++ .++-+++.|++.||. +.-.-...-+......++.+.+ ...| .|+..+|-.
T Consensus 6 ~~~~~igi~q~~~hp~ld~~~~G~~~~L~~~G~~~g~nv~~~~~~a~gd~~~~~~~~~~l~~----~~~D-lIiai~t~a 80 (302)
T 3lkv_A 6 AKTAKVAVSQIVEHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQFVG----ENPD-VLVGIATPT 80 (302)
T ss_dssp -CCEEEEEEESCCCHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHHHT----TCCS-EEEEESHHH
T ss_pred cCCceEEEEEeecChhHHHHHHHHHHHHHhhCcccCCcEEEEEEeCCCCHHHHHHHHHHHHh----cCCc-EEEEcCCHH
Confidence 3557899885 998886 788899999999974 2222233334456667777776 5566 355555543
Q ss_pred hhhh--hhcCCCceEEEEeCCHHHHHHhHh--hcCceEeEeccccCCHHHHHHHHHHHH
Q 021654 81 GVAI--FANKNPGVFATTCLTPADALNTRS--INNCNVLAVSGMSTSKESAVEILDTWL 135 (309)
Q Consensus 81 G~~i--aaNK~~giraa~~~~~~~A~~~r~--hN~aNvl~lg~~~~~~~~a~~i~~~~l 135 (309)
-.++ +..++|=|.+ -+.|+..+.+... +++.||-...... ..+.-.+++...+
T Consensus 81 a~a~~~~~~~iPVVf~-~v~dp~~~~l~~~~~~~g~nvtGv~~~~-~~~~~l~l~~~l~ 137 (302)
T 3lkv_A 81 AQALVSATKTIPIVFT-AVTDPVGAKLVKQLEQPGKNVTGLSDLS-PVEQHVELIKEIL 137 (302)
T ss_dssp HHHHHHHCSSSCEEEE-EESCTTTTTSCSCSSSCCSSEEEEECCC-CHHHHHHHHHHHS
T ss_pred HHHHHhhcCCCCeEEE-ecCCcchhhhcccccCCCCcEEEEECCc-CHHHHHHHHHHhC
Confidence 3333 2335665554 4578887776554 4567776654433 2334445555544
No 215
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=71.96 E-value=28 Score=25.94 Aligned_cols=35 Identities=20% Similarity=0.168 Sum_probs=25.9
Q ss_pred CCCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEe
Q 021654 8 AAPHPLKIIAGADSFGAELKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 8 ~~~~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~ 44 (309)
...+++||.|..|+. ...+.+++.|++.||+|.-+
T Consensus 3 ~~~~~~~ilivdd~~--~~~~~l~~~L~~~g~~v~~~ 37 (136)
T 3hdv_A 3 LVAARPLVLVVDDNA--VNREALILYLKSRGIDAVGA 37 (136)
T ss_dssp ----CCEEEEECSCH--HHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCeEEEECCCH--HHHHHHHHHHHHcCceEEEe
Confidence 344567999999985 46788999999999999753
No 216
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=71.78 E-value=0.76 Score=36.92 Aligned_cols=20 Identities=25% Similarity=0.513 Sum_probs=16.4
Q ss_pred ceEEEEecCchhhhhhh-cCC
Q 021654 70 TRGLVACGTGVGVAIFA-NKN 89 (309)
Q Consensus 70 ~~gi~~CgtG~G~~iaa-NK~ 89 (309)
-+.+++||+|+|.|+.+ +|+
T Consensus 14 kkIlvVC~sGmgTS~ml~~kl 34 (125)
T 1vkr_A 14 RKIIVACDAGMGSSAMGAGVL 34 (125)
T ss_dssp CEEEECCSSSSHHHHHHHHHH
T ss_pred cEEEEECCCcHHHHHHHHHHH
Confidence 47899999999999884 444
No 217
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=71.61 E-value=4.8 Score=31.09 Aligned_cols=32 Identities=16% Similarity=0.231 Sum_probs=23.7
Q ss_pred CCCCCcEEEEEeCcccHH----HHHHHHHHHHhCCCc
Q 021654 8 AAPHPLKIIAGADSFGAE----LKDALVSHLRSLNID 40 (309)
Q Consensus 8 ~~~~~mki~i~~D~~g~~----lk~~l~~~l~~~g~e 40 (309)
...+++||++.|+.. .. ++..|++.+++.|++
T Consensus 14 ~~~~~~kIlvvC~sG-~gTS~m~~~kl~~~~~~~gi~ 49 (110)
T 3czc_A 14 GRGSMVKVLTACGNG-MGSSMVIKMKVENALRQLGVS 49 (110)
T ss_dssp ----CEEEEEECCCC-HHHHHHHHHHHHHHHHHTTCC
T ss_pred cccCCcEEEEECCCc-HHHHHHHHHHHHHHHHHcCCC
Confidence 444567899999984 43 888999999999987
No 218
>1b78_A Pyrophosphatase; structural genomics, hyperthermal protein; 2.20A {Methanocaldococcus jannaschii} SCOP: c.51.4.1 PDB: 2mjp_A*
Probab=70.32 E-value=1.6 Score=37.74 Aligned_cols=81 Identities=15% Similarity=0.181 Sum_probs=53.1
Q ss_pred CCcEEEEEeCcccHHHHHHHHHHHHhCC-CcEEEecCC------CCcchhHHHHHHhhcCCCCCCCceEEEEecCchhhh
Q 021654 11 HPLKIIAGADSFGAELKDALVSHLRSLN-IDVEDLGTS------DYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGVA 83 (309)
Q Consensus 11 ~~mki~i~~D~~g~~lk~~l~~~l~~~g-~ev~d~G~~------~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~~ 83 (309)
.+|||++++-..+ .+ +++++.|...| ++|+.+... ++.+.|..=|+.+.+ ....-++.+-||+=+.
T Consensus 7 ~~m~iv~aT~N~~-K~-~E~~~iL~~~~~i~v~~~~~~~~E~~~tf~enA~~KA~~a~~-----~~g~p~laDDSGL~vd 79 (193)
T 1b78_A 7 EIMKIYFATGNPN-KI-KEANIILKDLKDVEIEQIKISYPEIQGTLEEVAEFGAKWVYN-----ILKKPVIVEDSGFFVE 79 (193)
T ss_dssp ---CEEEECSCHH-HH-HHHHHHTTTCTTCCEEEECCCCCCBSSCHHHHHHHHHHHHHH-----HHCSCEEEEEEEEEEG
T ss_pred CccEEEEEcCCHH-HH-HHHHHHhcccCCeEEEECCCCCCCCCCCHHHHHHHHHHHHHH-----HHCCCEEEEcCEEEEh
Confidence 4589999998876 44 46778888876 999876531 355566666666654 1223478888876554
Q ss_pred hhhcCCCceEEEEeCCHHHHHHhH
Q 021654 84 IFANKNPGVFATTCLTPADALNTR 107 (309)
Q Consensus 84 iaaNK~~giraa~~~~~~~A~~~r 107 (309)
|.|-.||| |+|+.+.
T Consensus 80 -AL~G~PGv--------ySar~~~ 94 (193)
T 1b78_A 80 -ALNGFPGT--------YSKFVQE 94 (193)
T ss_dssp -GGTTCEET--------THHHHHH
T ss_pred -hcCCCCcc--------cchHHHH
Confidence 45999998 6777753
No 219
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=70.02 E-value=32 Score=25.77 Aligned_cols=35 Identities=14% Similarity=0.155 Sum_probs=25.9
Q ss_pred CCCCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 7 AAAPHPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 7 ~~~~~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
+...+++||.|..|+. ...+.+.+.|+..||+|.-
T Consensus 2 ~~~~~~~~iLivdd~~--~~~~~l~~~L~~~g~~v~~ 36 (142)
T 3cg4_A 2 SLAEHKGDVMIVDDDA--HVRIAVKTILSDAGFHIIS 36 (142)
T ss_dssp ----CCCEEEEECSCH--HHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCeEEEEcCCH--HHHHHHHHHHHHCCeEEEE
Confidence 3445678999999884 5678899999999998764
No 220
>1v7r_A Hypothetical protein PH1917; ntpase, structural genomics, riken structural genomics/prote initiative, RSGI, hydrolase; HET: CIT; 1.40A {Pyrococcus horikoshii} SCOP: c.51.4.1 PDB: 2dvn_A* 2dvo_A* 2dvp_A 2ehk_A 2zti_A 2e5x_A*
Probab=69.92 E-value=5 Score=34.46 Aligned_cols=78 Identities=13% Similarity=0.138 Sum_probs=55.1
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecC-------CCCcchhHHHHHHhhcCCCCCCCceEEEEecCchhhhhh
Q 021654 13 LKIIAGADSFGAELKDALVSHLRSLNIDVEDLGT-------SDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGVAIF 85 (309)
Q Consensus 13 mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~G~-------~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~~ia 85 (309)
|||++++-..| .+ +++++.|...|++|+.... .++.+.|..=|+.+.+ ....-++..-||+=+. |
T Consensus 1 mkiv~aT~N~~-K~-~E~~~il~~~~i~v~~~~~~~~e~~g~tf~enA~~KA~~~~~-----~~g~p~laDDSGL~vd-A 72 (186)
T 1v7r_A 1 MKIFFITSNPG-KV-REVANFLGTFGIEIVQLKHEYPEIQAEKLEDVVDFGISWLKG-----KVPEPFMIEDSGLFIE-S 72 (186)
T ss_dssp CEEEEECSCHH-HH-HHHHHHHHTTTCEEEEECCCCCCCCCSSHHHHHHHHHHHHTT-----TSCSSEEEEEEEEEEG-G
T ss_pred CeEEEEcCCHH-HH-HHHHHHhhhcCcEEEECCCCCCCCCCCCHHHHHHHHHHHHHH-----HHCCCeEecCcEEEEe-e
Confidence 68999998876 44 4578888888999886431 1456677777777765 2334578888876554 4
Q ss_pred hcCCCceEEEEeCCHHHHHHh
Q 021654 86 ANKNPGVFATTCLTPADALNT 106 (309)
Q Consensus 86 aNK~~giraa~~~~~~~A~~~ 106 (309)
.|-.||| |+|+.+
T Consensus 73 L~G~PGv--------ySar~~ 85 (186)
T 1v7r_A 73 LKGFPGV--------YSSYVY 85 (186)
T ss_dssp GTTTBGG--------GHHHHH
T ss_pred cCCCCcc--------hhHHHH
Confidence 4999998 677775
No 221
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=69.45 E-value=23 Score=29.27 Aligned_cols=65 Identities=15% Similarity=0.171 Sum_probs=42.0
Q ss_pred EEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeE---EEecCCcEEEECCCCeEEEEEcCCceEEEE
Q 021654 218 VRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGER---FDLTVGDYLFTPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 218 ~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~---~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~ 284 (309)
.++++|...-..-.+....++|++|.+.+....+|+. ..+.|||++=. ...+.+.+.+++.++..
T Consensus 30 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~~G~--~~~~~~~A~~~~~v~~i 97 (220)
T 2fmy_A 30 QRYSKKAILYTPNTERNLVFLVKSGRVRVYLAYEDKEFTLAILEAGDIFCT--HTRAFIQAMEDTTILYT 97 (220)
T ss_dssp EEECTTCEEECTTCSSCEEEEEEESEEEEEEECSSCEEEEEEEETTCEEES--CSSSEEEESSSEEEEEE
T ss_pred eEeCCCCEEECCCCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEeCC--ccceEEEEcCcEEEEEE
Confidence 4555665543322345567899999999853334443 57789998765 34567788888777543
No 222
>3tqu_A Non-canonical purine NTP pyrophosphatase; HAM1 protein, hydrolase; HET: MSE; 1.90A {Coxiella burnetii}
Probab=68.32 E-value=1.6 Score=38.19 Aligned_cols=75 Identities=23% Similarity=0.344 Sum_probs=52.0
Q ss_pred CcEEEEEeCcccHHHHHHHHHHHHhCCCcEE---EecCC-------CCcchhHHHHHHhhcCCCCCCCceEEEEecCchh
Q 021654 12 PLKIIAGADSFGAELKDALVSHLRSLNIDVE---DLGTS-------DYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVG 81 (309)
Q Consensus 12 ~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~---d~G~~-------~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G 81 (309)
+|||++++-..| .+ +++++.|...|++|+ |++.. +|.+.|..=|+.+.+ ....-++.+-||+=
T Consensus 4 M~~iv~aT~N~~-K~-~E~~~iL~~~~i~v~~~~~~~~~ei~E~g~tf~eNA~~KA~~~~~-----~~g~pvlaDDSGL~ 76 (203)
T 3tqu_A 4 MLEIVLASQNSS-KL-AEMQELLRDLEIKFIPQTEFSVPDIEETGSTFVENAIIKARHAAK-----QTGLPALADDSGLT 76 (203)
T ss_dssp CEEEEECCCCHH-HH-HHHHHHTTTSSEEEEEGGGGTCCCCCCCCSSHHHHHHHHHHHHHH-----HHSSCEEEEEEEEE
T ss_pred CCEEEEEECCHH-HH-HHHHHHhhhcCcEEEEhhhcCCCCCCCCCCCHHHHHHHHHHHHHH-----HHCcCEEEeccEEE
Confidence 458999998876 34 467888888899998 44421 355566666666654 22345788888876
Q ss_pred hhhhhcCCCceEE
Q 021654 82 VAIFANKNPGVFA 94 (309)
Q Consensus 82 ~~iaaNK~~gira 94 (309)
+. |.|-.|||+.
T Consensus 77 vd-AL~G~PGvyS 88 (203)
T 3tqu_A 77 IA-ALNSAPGVFS 88 (203)
T ss_dssp EG-GGTTCBGGGT
T ss_pred Eh-hhCCCCccee
Confidence 66 7799999853
No 223
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=67.84 E-value=24 Score=30.47 Aligned_cols=40 Identities=15% Similarity=0.093 Sum_probs=28.2
Q ss_pred CCCcEEEEEe---CcccHHHHHHHHHHHHhCCCcEEEecCCCCc
Q 021654 10 PHPLKIIAGA---DSFGAELKDALVSHLRSLNIDVEDLGTSDYY 50 (309)
Q Consensus 10 ~~~mki~i~~---D~~g~~lk~~l~~~l~~~g~ev~d~G~~~y~ 50 (309)
..+-||++++ |.--.- |+.+...|+..||+|+|+|.+--+
T Consensus 90 ~~~~~vll~~v~gd~HdiG-~~iv~~~l~~~G~~Vi~LG~~vp~ 132 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIG-HRLVTTMLGANGFQIVDLGVDVLN 132 (215)
T ss_dssp --CCEEEEEECTTCCCCHH-HHHHHHHHHHTSCEEEECCSSCCH
T ss_pred CCCCeEEEEeCCCChhHHH-HHHHHHHHHHCCCeEEEcCCCCCH
Confidence 3445899996 433333 467888899999999999986433
No 224
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=66.47 E-value=10 Score=32.85 Aligned_cols=66 Identities=15% Similarity=0.102 Sum_probs=43.3
Q ss_pred EEEcCCCcCCCeecCCceE--EEEE-----ecEEEEEEeeC-------------------Ce--EEEecCCcEEEECCCC
Q 021654 218 VRFKAGSVEPAHHHTFGHD--LVVL-----QGKKSVWNLTK-------------------GE--RFDLTVGDYLFTPAGD 269 (309)
Q Consensus 218 ~~l~pG~~~p~H~H~~~e~--vyVl-----sG~l~v~i~~~-------------------~~--~~~L~pGD~v~IP~g~ 269 (309)
...++|.....|.|+...+ +|-| .|.+.++ .. +. ...-.+|+.+++|+..
T Consensus 108 ~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~--~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS~l 185 (216)
T 2rg4_A 108 NILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLE--DPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESWL 185 (216)
T ss_dssp EEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEE--CTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEETTS
T ss_pred EEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEEe--CCccccccccCcccccCcccCCCeeEecCCCCeEEEECCCC
Confidence 4567888888999987666 2222 4566663 11 11 3456799999999999
Q ss_pred eEEEEEcCC--ceEEEEE
Q 021654 270 VHRVKYYEE--TEFFIKW 285 (309)
Q Consensus 270 ~H~~~n~gd--~~~~i~~ 285 (309)
+|.+.-... ..+-|.|
T Consensus 186 ~H~V~p~~~~~~RiSIsF 203 (216)
T 2rg4_A 186 RHEVPMNMAEEDRISVSF 203 (216)
T ss_dssp CEEECCCCSSSCEEEEEE
T ss_pred EEeccCCCCCCCEEEEEE
Confidence 999865332 4444443
No 225
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=65.25 E-value=19 Score=27.16 Aligned_cols=68 Identities=10% Similarity=0.035 Sum_probs=40.0
Q ss_pred EEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeC-Ce------EEEecCCcEEEEC---CCCeE--EEEEcCCceEEEE
Q 021654 217 IVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTK-GE------RFDLTVGDYLFTP---AGDVH--RVKYYEETEFFIK 284 (309)
Q Consensus 217 ~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~-~~------~~~L~pGD~v~IP---~g~~H--~~~n~gd~~~~i~ 284 (309)
...+++|...-..-.+....++|++|.+.+..... ++ ...+.|||++=.. .+.++ .+.+.+++.++..
T Consensus 31 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG~~~~~~~~~~~~~~~a~~~~~~~~i 110 (142)
T 3mdp_A 31 EKSFPTGSVIFKENSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFGVSSLIKPYHYTSSARATKPVRVVDI 110 (142)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESCEEEECC---------CEEEEECTTCEECGGGSSTTCBCSSEEEESSCEEEEEE
T ss_pred EEecCCCCEEEeCCCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEechHHHcCCCCceEEEEECCcEEEEEE
Confidence 34566666543222334567899999999853222 21 4568999976422 34444 6777777776533
No 226
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=64.72 E-value=1.7 Score=33.70 Aligned_cols=20 Identities=30% Similarity=0.713 Sum_probs=16.4
Q ss_pred CCceEEEEecCchhhhhhhc
Q 021654 68 TTTRGLVACGTGVGVAIFAN 87 (309)
Q Consensus 68 ~~~~gi~~CgtG~G~~iaaN 87 (309)
.--+.+++|++|+|.|..+.
T Consensus 17 ~~~kIlvvC~sG~gTS~m~~ 36 (110)
T 3czc_A 17 SMVKVLTACGNGMGSSMVIK 36 (110)
T ss_dssp -CEEEEEECCCCHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHH
Confidence 34578999999999998776
No 227
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=64.60 E-value=7.1 Score=33.28 Aligned_cols=66 Identities=15% Similarity=0.129 Sum_probs=44.3
Q ss_pred CCCCCcEEEEEe-----------CcccHHHHHHHHHHHHh---CCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCCce
Q 021654 8 AAPHPLKIIAGA-----------DSFGAELKDALVSHLRS---LNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSDTTTR 71 (309)
Q Consensus 8 ~~~~~mki~i~~-----------D~~g~~lk~~l~~~l~~---~g~ev~d~G~--~~y~~~a~~va~~v~~~~~~~~~~~ 71 (309)
...++||++|.+ |..+ ..|.+.|++ .|+++.+++. ++...+...+.+.+.+ ..+|.
T Consensus 10 ~v~~~~rv~IistGdEl~~g~~~D~n~----~~L~~~L~~~~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~----~~~Dl 81 (189)
T 1jlj_A 10 NHDHQIRVGVLTVSDSCFRNLAEDRSG----INLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDE----KELNL 81 (189)
T ss_dssp ---CCCEEEEEEECHHHHTTSSCCHHH----HHHHHHHHCTTTTCCEEEEEEEECSCHHHHHHHHHHHHHT----SCCSE
T ss_pred cccCCCEEEEEEECCccCCCcccchHH----HHHHHHHhchhcCCcEEEEEEEeCCCHHHHHHHHHHHhhc----CCCCE
Confidence 345667877664 2222 356777777 7999999885 4566677777777664 45788
Q ss_pred EEEEecCchh
Q 021654 72 GLVACGTGVG 81 (309)
Q Consensus 72 gi~~CgtG~G 81 (309)
-|+--|||.|
T Consensus 82 VIttGGtg~g 91 (189)
T 1jlj_A 82 ILTTGGTGFA 91 (189)
T ss_dssp EEEESCCSSS
T ss_pred EEEcCCCCCC
Confidence 8888888876
No 228
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis}
Probab=64.07 E-value=12 Score=36.49 Aligned_cols=43 Identities=28% Similarity=0.272 Sum_probs=34.5
Q ss_pred cEEEEEeCc--ccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHH
Q 021654 13 LKIIAGADS--FGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAE 55 (309)
Q Consensus 13 mki~i~~D~--~g~~lk~~l~~~l~~~g~ev~d~G~~~y~~~a~~ 55 (309)
-+|+||.|. ++-.+++.+.+-|.+.|.+|+|+|.-.-|-++..
T Consensus 63 ~~VvVG~D~R~ss~~~~~a~a~gl~a~Gi~V~~~g~~pTP~l~~a 107 (485)
T 3uw2_A 63 DAVVVARDGRLSGPELVGALADGLRAAGVDVVDVGMVPTPVGYFA 107 (485)
T ss_dssp CEEEEEECSCTTHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHH
T ss_pred CEEEEEECCCcCHHHHHHHHHHHHHHCCCEEEEeCCCChHHHHHH
Confidence 479999996 4567999999999999999999996555544433
No 229
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=63.96 E-value=6.4 Score=33.61 Aligned_cols=117 Identities=15% Similarity=0.070 Sum_probs=65.5
Q ss_pred CCCCCcEEEEEeCcccHHHH--------HHHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCCceEEEEec
Q 021654 8 AAPHPLKIIAGADSFGAELK--------DALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSDTTTRGLVACG 77 (309)
Q Consensus 8 ~~~~~mki~i~~D~~g~~lk--------~~l~~~l~~~g~ev~d~G~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~Cg 77 (309)
...+++||+|-+ .|-++. ..|.+.|++.|++|.+++. +++..+...+.+.+.+ .+|.-|+--|
T Consensus 26 ~~~~~~rvaIis--tGdEl~~G~~Dsn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~-----~~DlVIttGG 98 (185)
T 3rfq_A 26 AELVVGRALVVV--VDDRTAHGDEDHSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIG-----GVDLVVSVGG 98 (185)
T ss_dssp ---CCEEEEEEE--ECHHHHTTCCCSHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHT-----TCSEEEEESC
T ss_pred cCCCCCEEEEEE--ECcccCCCCcCcHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhC-----CCCEEEECCC
Confidence 444667776653 122221 4677788889999999985 4566677777776643 4787777777
Q ss_pred Cchhhh------hh--hc-CCCceEE-----EEeCCHHHHHHhH----hhcCceEeEeccccCCHHHHHHHH
Q 021654 78 TGVGVA------IF--AN-KNPGVFA-----TTCLTPADALNTR----SINNCNVLAVSGMSTSKESAVEIL 131 (309)
Q Consensus 78 tG~G~~------ia--aN-K~~gira-----a~~~~~~~A~~~r----~hN~aNvl~lg~~~~~~~~a~~i~ 131 (309)
||.|-- +. .. .+||+-- ++-.-.-.|.++| ..++.=|++|++--.+...+.+.+
T Consensus 99 ts~g~~D~t~eal~~l~~~~l~G~~~~f~~v~~kpG~p~a~lsR~~~G~~~~~~V~~LPGnP~aa~~~~~~l 170 (185)
T 3rfq_A 99 TGVTPRDVTPESTREILDREILGIAEAIRASGLSAGIIDAGLSRGLAGVSGSTLVVNLAGSRYAVRDGMATL 170 (185)
T ss_dssp CSSSTTCCHHHHHHTTCSEECHHHHHHHHHHHHHTTCHHHHTCCCCEEEETTEEEEEECSSHHHHHHHHHHH
T ss_pred CCCCCcccHHHHHHHHhcccCccHHHHHHHHhcCCCCCceeeeehhhcccCCeEEEECCCCHHHHHHHHHHH
Confidence 887742 11 11 1233200 0000012333333 246788999999866555554443
No 230
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=63.91 E-value=23 Score=29.14 Aligned_cols=67 Identities=16% Similarity=0.202 Sum_probs=41.6
Q ss_pred EEEEcCCCcCCCeecCCceEEEEEecEEEEEEee-CCeE---EEecCCcEEEE-------CCCCeEEEEEcCCceEEE
Q 021654 217 IVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLT-KGER---FDLTVGDYLFT-------PAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 217 ~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~-~~~~---~~L~pGD~v~I-------P~g~~H~~~n~gd~~~~i 283 (309)
...+++|...-..-.+....++|++|.+.+.... +|+. ..+.|||++.+ +....+.+.+.+++.++.
T Consensus 28 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~a~~~~~~~~ 105 (220)
T 3dv8_A 28 TQHVKKGTIIHNGNMDCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLLSASCIMRSIQFEVTIEAEKDTDLWI 105 (220)
T ss_dssp EEEECTTCEEEEGGGCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESGGGGGGCTTCCCCCEEEESSCEEEEE
T ss_pred eEEeCCCCEEECCCCCcceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeehhHHHHhCCCCCceEEEEeeeeEEEE
Confidence 4456666665433344566799999999985432 3333 66789998521 222345677777777653
No 231
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=63.61 E-value=23 Score=29.27 Aligned_cols=34 Identities=24% Similarity=0.269 Sum_probs=25.4
Q ss_pred CCCCCcEEEEEeCcccHH----HHHHHHHHHHhCCCcEE
Q 021654 8 AAPHPLKIIAGADSFGAE----LKDALVSHLRSLNIDVE 42 (309)
Q Consensus 8 ~~~~~mki~i~~D~~g~~----lk~~l~~~l~~~g~ev~ 42 (309)
...++|||.|++--.++. ..+.+++.|++.| +|.
T Consensus 7 ~~~~~~kVYLAGp~~~~~~~~~~~~~i~~~l~~~G-~V~ 44 (165)
T 2khz_A 7 GEQAPCSVYFCGSIRGGREDQALYARIVSRLRRYG-KVL 44 (165)
T ss_dssp SSCCCCEEEEECCCSSCSHHHHHHHHHHHHHHHHS-EES
T ss_pred CCCCCeEEEEECCCCCcHHHHHHHHHHHHHHHhcC-Ccc
Confidence 445568999997666542 4588999999999 884
No 232
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=62.94 E-value=9.6 Score=31.55 Aligned_cols=66 Identities=15% Similarity=0.125 Sum_probs=41.6
Q ss_pred EEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEE-----ECCCCeEEEEEcCCceEEEE
Q 021654 218 VRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLF-----TPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 218 ~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~-----IP~g~~H~~~n~gd~~~~i~ 284 (309)
..+.||..+-..-.+....++|++|.+.+.. .+++...+.+||++= ........+.+.+++.++..
T Consensus 98 ~~~~~ge~I~~~g~~~~~ly~I~~G~v~v~~-~~g~~~~l~~G~~fGe~~~~~~~~~~~~v~a~~~~~l~~i 168 (202)
T 3bpz_A 98 EVFQPGDYIIREGTIGKKMYFIQHGVVSVLT-KGNKEMKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSL 168 (202)
T ss_dssp EEECTTCEEECTTSBCCEEEEEEECEEEEEC-TTSCCEEEETTCEECHHHHHHCSBCSSEEEESSCEEEEEE
T ss_pred eEECCCCEEEECCCcCCeEEEEeccEEEEEE-CCCeEEEEcCCCEeccHHHhcCCCcccEEEEeeEEEEEEE
Confidence 4555665543222334567899999999953 456677899999762 12223456777777776533
No 233
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=62.59 E-value=31 Score=25.43 Aligned_cols=35 Identities=17% Similarity=0.055 Sum_probs=27.5
Q ss_pred CCCCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 7 AAAPHPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 7 ~~~~~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
+...+++||.|..|+. ...+.+.+.|++.||+|.-
T Consensus 2 ~~~~~~~~ilivdd~~--~~~~~l~~~L~~~g~~v~~ 36 (130)
T 3eod_A 2 TQPLVGKQILIVEDEQ--VFRSLLDSWFSSLGATTVL 36 (130)
T ss_dssp -CTTTTCEEEEECSCH--HHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCeEEEEeCCH--HHHHHHHHHHHhCCceEEE
Confidence 3445668999999985 4678899999999999874
No 234
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=62.48 E-value=6.7 Score=32.62 Aligned_cols=49 Identities=12% Similarity=0.215 Sum_probs=35.5
Q ss_pred HHHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCCceEEEEecCchhh
Q 021654 28 DALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGV 82 (309)
Q Consensus 28 ~~l~~~l~~~g~ev~d~G~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~ 82 (309)
..|.+.|++.|++|.+++. ++ ..+...+.+.+.+ .+|.-|+--|||.|-
T Consensus 30 ~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~-----~~DlVittGG~s~g~ 80 (164)
T 3pzy_A 30 PIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDD-----DVDVILTSGGTGIAP 80 (164)
T ss_dssp HHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHT-----TCSEEEEESCCSSST
T ss_pred HHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhC-----CCCEEEECCCCCCCC
Confidence 3677888889999999885 56 6666666666642 467777777777764
No 235
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=61.99 E-value=52 Score=25.31 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=26.0
Q ss_pred CCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEe
Q 021654 9 APHPLKIIAGADSFGAELKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 9 ~~~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~ 44 (309)
..+++||.|..|+. ...+.+++.|++.||+|.-+
T Consensus 4 ~~~~~~ILivdd~~--~~~~~l~~~L~~~g~~v~~~ 37 (154)
T 3gt7_A 4 SNRAGEILIVEDSP--TQAEHLKHILEETGYQTEHV 37 (154)
T ss_dssp ---CCEEEEECSCH--HHHHHHHHHHHTTTCEEEEE
T ss_pred ccCCCcEEEEeCCH--HHHHHHHHHHHHCCCEEEEe
Confidence 44568999999985 56788999999999988643
No 236
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii}
Probab=60.94 E-value=16 Score=35.13 Aligned_cols=46 Identities=26% Similarity=0.255 Sum_probs=38.1
Q ss_pred cEEEEEeCc--ccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHH
Q 021654 13 LKIIAGADS--FGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGR 58 (309)
Q Consensus 13 mki~i~~D~--~g~~lk~~l~~~l~~~g~ev~d~G~~~y~~~a~~va~ 58 (309)
-+|+||.|. .+-.+++.+.+-|.+.|.+|+|+|.-.-|.++..+-.
T Consensus 38 ~~VvIG~D~R~ss~~~~~a~a~gl~~~G~~V~~~g~~pTP~~~~av~~ 85 (455)
T 2f7l_A 38 SKILVGRDVRAGGDMLVKIVEGGLLSVGVEVYDGGMAPTPALQYAVKT 85 (455)
T ss_dssp CEEEEEECSCTTHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHHHHH
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHCCCcEEEcCCCCcHHHHHHHHh
Confidence 379999996 4777999999999999999999997766666665544
No 237
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=59.76 E-value=20 Score=27.45 Aligned_cols=67 Identities=12% Similarity=0.073 Sum_probs=39.3
Q ss_pred EEEcCCCcCCCeecCCceEEEEEecEEEEEEee-CCe---EEEecCCcEEEE-----CCC-CeEEEEEcCCceEEEE
Q 021654 218 VRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLT-KGE---RFDLTVGDYLFT-----PAG-DVHRVKYYEETEFFIK 284 (309)
Q Consensus 218 ~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~-~~~---~~~L~pGD~v~I-----P~g-~~H~~~n~gd~~~~i~ 284 (309)
.++++|...-..-.+....++|++|.+.+.... +++ ...+.+||++=. ... ..+.+.+.+++.++..
T Consensus 38 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~a~~~~~~~~i 114 (154)
T 2z69_A 38 VNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAVVPSQLFRF 114 (154)
T ss_dssp EEECTTCEEECTTSBCCEEEEEEESCEEEECCCC-----CCEEECTTEEESGGGGGSSCSBCSSEEEESSSEEEEEE
T ss_pred EEecCCCEEecCCCccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCeeccHhhccCCCCCceEEEEccceEEEEE
Confidence 345555544332234456789999999985321 232 368889997621 212 4567788887776543
No 238
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=59.34 E-value=29 Score=31.60 Aligned_cols=88 Identities=11% Similarity=0.142 Sum_probs=46.3
Q ss_pred EEEEEcCCCcCCCeecC-CceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCeEEEEEc--CCceEE----------
Q 021654 216 AIVRFKAGSVEPAHHHT-FGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYY--EETEFF---------- 282 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~-~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~H~~~n~--gd~~~~---------- 282 (309)
..+++++|........+ ..-++||++|.+++ +..+....+.++..++..+|..=.+.+. ++..++
T Consensus 172 ~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v--~g~~~~~~~~~~~~~~l~~gd~~~i~~~a~~~a~~LLl~G~Pl~ep 249 (290)
T 1j1l_A 172 LDFKLDPGAKHSQPIPKGWTSFIYTISGDVYI--GPDDAQQKIEPHHTAVLGEGDSVQVENKDPKRSHFVLIAGEPLREP 249 (290)
T ss_dssp EEEEECTTCEEEEECCTTCEEEEEEEESCEEE--SCTTSCEEECTTEEEEECSCSEEEEECCSSSCEEEEEEEECCCCSC
T ss_pred EEEEECCCCEEEeecCCCCEEEEEEEeCeEEE--CCcccceeccCceEEEecCCCEEEEEEcCCCCcEEEEEEcccCCCC
Confidence 44678888876433322 34569999999998 4111113344455555555544444432 223332
Q ss_pred EEEcCccccccchhHHHHHHHHh
Q 021654 283 IKWDGRWDMFFDEDLEAAKKAVE 305 (309)
Q Consensus 283 i~~~~~~~i~~~e~~~~~~~~~~ 305 (309)
+.+-|+...--.+++..|.+..+
T Consensus 250 i~~~gpFVmnt~eeI~qA~~d~~ 272 (290)
T 1j1l_A 250 VIQHGPFVMNTNEEISQAILDFR 272 (290)
T ss_dssp CEEETTEEESSHHHHHHHHHHHH
T ss_pred EEecCCeeeCCHHHHHHHHHHHH
Confidence 22334444445566666666543
No 239
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii}
Probab=58.19 E-value=19 Score=34.63 Aligned_cols=45 Identities=31% Similarity=0.394 Sum_probs=37.3
Q ss_pred cEEEEEeCc--ccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHH
Q 021654 13 LKIIAGADS--FGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVG 57 (309)
Q Consensus 13 mki~i~~D~--~g~~lk~~l~~~l~~~g~ev~d~G~~~y~~~a~~va 57 (309)
.+|+||.|. .+-.+++.+.+-|.+.|.+|+|+|.-.-|.++..+-
T Consensus 42 ~~VvIG~D~R~ss~~l~~a~~~gl~~~G~~V~~~g~~pTP~l~~~v~ 88 (455)
T 1wqa_A 42 PLVVVGRDTRVSGEMLKEALISGLLSVGCDVIDVGIAPTPAVQWATK 88 (455)
T ss_dssp CEEEEEECSCTTHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHHHH
T ss_pred CeEEEEeCCCcCHHHHHHHHHHHHHHcCCeEEEeCCCChHHHHHHHH
Confidence 479999996 477799999999999999999999766666655553
No 240
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=57.94 E-value=12 Score=30.82 Aligned_cols=60 Identities=12% Similarity=0.111 Sum_probs=37.0
Q ss_pred CCCcEEEEEe---CcccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCCceEEEEecC
Q 021654 10 PHPLKIIAGA---DSFGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSDTTTRGLVACGT 78 (309)
Q Consensus 10 ~~~mki~i~~---D~~g~~lk~~l~~~l~~~g~ev~d~G~~~y~~~a~~va~~v~~~~~~~~~~~gi~~Cgt 78 (309)
.++-||++++ |.--.- ++.+...|+..||+|+|+|.+.-++ .+.+.+.+ ...+ .|.+|.+
T Consensus 16 ~~~~~vlla~~~gd~HdiG-~~~va~~l~~~G~eVi~lG~~~p~e---~lv~aa~~----~~~d-iV~lS~~ 78 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRG-AKVVARALRDAGFEVVYTGLRQTPE---QVAMAAVQ----EDVD-VIGVSIL 78 (161)
T ss_dssp CCSCEEEEEEESSSSCCHH-HHHHHHHHHHTTCEEECCCSBCCHH---HHHHHHHH----TTCS-EEEEEES
T ss_pred CCCCEEEEEeCCCCccHHH-HHHHHHHHHHCCCEEEECCCCCCHH---HHHHHHHh----cCCC-EEEEEee
Confidence 3456888885 433333 4677888999999999999864332 33344443 2333 5555554
No 241
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3rsm_A 3bkq_X* 3c04_A* 2fkm_X*
Probab=57.67 E-value=17 Score=34.94 Aligned_cols=45 Identities=22% Similarity=0.234 Sum_probs=37.0
Q ss_pred cEEEEEeCc--ccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHH
Q 021654 13 LKIIAGADS--FGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVG 57 (309)
Q Consensus 13 mki~i~~D~--~g~~lk~~l~~~l~~~g~ev~d~G~~~y~~~a~~va 57 (309)
-+|+||.|. ++-.|++.+.+-|.+.|.+|+|+|.-.-|.++..+-
T Consensus 49 ~~VvVG~D~R~ss~~l~~a~~~gl~a~G~~V~~~g~~pTP~l~~av~ 95 (463)
T 1p5d_X 49 PCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAAN 95 (463)
T ss_dssp CEEEEEECSCTTHHHHHHHHHHHHHTBTCEEEEEEECCHHHHHHHHH
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEeCCCChHHHHHHHH
Confidence 379999996 577799999999999999999999766665555553
No 242
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=57.01 E-value=9.7 Score=29.03 Aligned_cols=29 Identities=21% Similarity=0.336 Sum_probs=22.8
Q ss_pred ceEEEEEecEEEEEEeeCCeEEEecCCcEE
Q 021654 234 GHDLVVLQGKKSVWNLTKGERFDLTVGDYL 263 (309)
Q Consensus 234 ~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v 263 (309)
..+++|++|.+.+.. .+++...+.+||++
T Consensus 59 ~~~y~i~~G~v~~~~-~~g~~~~l~~G~~f 87 (134)
T 2d93_A 59 DSWYVILNGTVEISH-PDGKVENLFMGNSF 87 (134)
T ss_dssp CEEEECCBSCEEEEC-SSSCEEEECTTCEE
T ss_pred CeEEEEEeCEEEEEc-CCCcEEEecCCCcc
Confidence 446889999999863 35666889999976
No 243
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=56.59 E-value=18 Score=29.56 Aligned_cols=66 Identities=17% Similarity=0.055 Sum_probs=40.7
Q ss_pred EEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEE-----ECCCCeEEEEEcCCceEEE
Q 021654 218 VRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLF-----TPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 218 ~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~-----IP~g~~H~~~n~gd~~~~i 283 (309)
..+.||..+-..-.+....++|++|.+.+....+.....+.+||++= ........+.+.+++.++.
T Consensus 97 ~~~~~ge~I~~~G~~~~~ly~I~~G~v~~~~~~g~~~~~l~~G~~fGe~~~~~~~~~~~~~~a~~~~~l~~ 167 (198)
T 2ptm_A 97 EVFQPADYVIQEGTFGDRMFFIQQGIVDIIMSDGVIATSLSDGSYFGEICLLTRERRVASVKCETYCTLFS 167 (198)
T ss_dssp EEECTTCEEECTTSCCSEEEEEEECCEEEECTTSCEEEEECTTCEESCHHHHHSSCCSSEEEESSCEEEEE
T ss_pred eeeCCCCEEEECCCcCcEEEEEEeCEEEEEecCCeEEEEecCCCEechHHHcCCCccceEEEEeeEEEEEE
Confidence 45556655432223445678999999999542233467899999762 1223345677777777653
No 244
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=56.54 E-value=17 Score=27.44 Aligned_cols=64 Identities=16% Similarity=0.080 Sum_probs=39.9
Q ss_pred EEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEE-----CCCCeEEEEEcCCceEEEE
Q 021654 218 VRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFT-----PAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 218 ~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~I-----P~g~~H~~~n~gd~~~~i~ 284 (309)
.++++|...-..-.+....++|++|.+.+.. .+ ...+.|||++=. .....+.+.+.+++.++..
T Consensus 37 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~--~~-~~~~~~G~~~G~~~~~~~~~~~~~~~a~~~~~~~~i 105 (138)
T 1vp6_A 37 RTVPAGAVICRIGEPGDRMFFVVEGSVSVAT--PN-PVELGPGAFFGEMALISGEPRSATVSAATTVSLLSL 105 (138)
T ss_dssp EEECTTCEEECTTSCCCEEEEEEESCEEECS--SS-CEEECTTCEECHHHHHHCCCCSSCEEESSSEEEEEE
T ss_pred EEeCCCCEEEeCCCCcceEEEEEeeEEEEEe--CC-cceECCCCEeeehHhccCCCceeEEEECCCEEEEEE
Confidence 4555665543333345567899999999942 23 468899997522 1223456777777776533
No 245
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=56.25 E-value=30 Score=27.08 Aligned_cols=65 Identities=8% Similarity=-0.025 Sum_probs=38.1
Q ss_pred EEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeE---EEecCCcEEEE-----CCCCeEEEEEcCCceEE
Q 021654 218 VRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGER---FDLTVGDYLFT-----PAGDVHRVKYYEETEFF 282 (309)
Q Consensus 218 ~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~---~~L~pGD~v~I-----P~g~~H~~~n~gd~~~~ 282 (309)
..+++|..+-..--+...+++|++|.+.+....+++. ..+.+||++=. .....+.+.+.+++.++
T Consensus 64 ~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~g~~~~~~~~~~G~~fGe~~~~~~~~~~~~v~A~~~~~~~ 136 (161)
T 3idb_B 64 KLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFGELALMYNTPRAATITATSPGALW 136 (161)
T ss_dssp EEECTTCEEECTTSCCCEEEEEEESEEEEEEEETTEEEEEEEEESCCEECGGGGTCCCCCSSEEEESSSEEEE
T ss_pred eEeCCCCEEEeCCCCCcEEEEEEeCEEEEEEcCCCCeEEEEEcCCCCEechHHHHcCCCcccEEEECCCeEEE
Confidence 3455555443222345567899999999965444443 45789995521 12223456777776654
No 246
>2car_A Inosine triphosphate pyrophosphatase; hydrolase, inosine triphosphate pyrophosphohydrolase, inosine triphosphatase deficiency, ITP, IMP; 1.09A {Homo sapiens} SCOP: c.51.4.1 PDB: 2j4e_A* 2i5d_A
Probab=55.91 E-value=6 Score=34.21 Aligned_cols=79 Identities=11% Similarity=0.019 Sum_probs=53.1
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHh-CCCcEEEecCC------CCcchhHHHHHHhhcCCCCCCCceEEEEecCchhhhhh
Q 021654 13 LKIIAGADSFGAELKDALVSHLRS-LNIDVEDLGTS------DYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGVAIF 85 (309)
Q Consensus 13 mki~i~~D~~g~~lk~~l~~~l~~-~g~ev~d~G~~------~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~~ia 85 (309)
+||++++-..+ .+ +++++.|.. .|++|+....+ ++.+.|..=|+.+.+ ....-++..-||+=+. |
T Consensus 10 ~~iv~aT~N~~-K~-~E~~~iL~~~~~i~v~~~~~~~~E~~~tf~enA~~KA~~a~~-----~~g~pvlaDDSGL~vd-A 81 (196)
T 2car_A 10 KKIVFVTGNAK-KL-EEVVQILGDKFPCTLVAQKIDLPEYQGEPDEISIQKCQEAVR-----QVQGPVLVEDTCLCFN-A 81 (196)
T ss_dssp CEEEEECSCHH-HH-HHHHHHHCTTCCSEEEEECCCCCCBCSCHHHHHHHHHHHHHH-----HHSSCEEEEEEEEEEG-G
T ss_pred ceEEEEcCCHH-HH-HHHHHHcCCCCCcEEEECCCCCCCCCCCHHHHHHHHHHHHHH-----HHCCCEEeeccEEEEe-c
Confidence 47999998876 44 457778876 57888875421 355666666666654 2234478888876554 4
Q ss_pred hcCCCceEEEEeCCHHHHHHhH
Q 021654 86 ANKNPGVFATTCLTPADALNTR 107 (309)
Q Consensus 86 aNK~~giraa~~~~~~~A~~~r 107 (309)
.|-.||| |+|+.+.
T Consensus 82 L~G~PGv--------ySar~~~ 95 (196)
T 2car_A 82 LGGLPGP--------YIKWFLE 95 (196)
T ss_dssp GTTCEET--------THHHHHH
T ss_pred cCCCCcc--------hhhHhhh
Confidence 5999996 6777763
No 247
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=55.58 E-value=11 Score=31.71 Aligned_cols=80 Identities=11% Similarity=0.027 Sum_probs=52.9
Q ss_pred HHHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCCceEEEEecCchhhhhhhcCCCceEEEEeCCHHHHHH
Q 021654 28 DALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGVAIFANKNPGVFATTCLTPADALN 105 (309)
Q Consensus 28 ~~l~~~l~~~g~ev~d~G~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~~iaaNK~~giraa~~~~~~~A~~ 105 (309)
..|.+.|++.|++|...+. ++...+...+.+.+.. +|.-|+--|+|.| .+-.+..-
T Consensus 26 ~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~------~DlVittGG~g~~----------------~~D~T~ea 83 (172)
T 3kbq_A 26 AFIGNFLTYHGYQVRRGFVVMDDLDEIGWAFRVALEV------SDLVVSSGGLGPT----------------FDDMTVEG 83 (172)
T ss_dssp HHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHH------CSEEEEESCCSSS----------------TTCCHHHH
T ss_pred HHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhc------CCEEEEcCCCcCC----------------cccchHHH
Confidence 3677888999999999885 4555666666666543 5666665566654 33344443
Q ss_pred hHhhcCceEeEeccccCCHHHHHHHHHHHHc
Q 021654 106 TRSINNCNVLAVSGMSTSKESAVEILDTWLK 136 (309)
Q Consensus 106 ~r~hN~aNvl~lg~~~~~~~~a~~i~~~~l~ 136 (309)
.++ ++|..+..-+.+.+.++.|+.
T Consensus 84 ~a~-------~~~~~l~~~~e~~~~i~~~~~ 107 (172)
T 3kbq_A 84 FAK-------CIGQDLRIDEDALAMIKKKYG 107 (172)
T ss_dssp HHH-------HHTCCCEECHHHHHHHHHHHC
T ss_pred HHH-------HcCCCeeeCHHHHHHHHHHHc
Confidence 333 245667777888888888876
No 248
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=55.06 E-value=13 Score=28.78 Aligned_cols=36 Identities=19% Similarity=0.224 Sum_probs=27.4
Q ss_pred CCCCCcEEEEEeCcccHH--HHHHHHHHHHhCCCcEEE
Q 021654 8 AAPHPLKIIAGADSFGAE--LKDALVSHLRSLNIDVED 43 (309)
Q Consensus 8 ~~~~~mki~i~~D~~g~~--lk~~l~~~l~~~g~ev~d 43 (309)
+..++|||.+.|..+.-. |-+.++++.+++|++|.=
T Consensus 2 ~~~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i 39 (108)
T 3nbm_A 2 NASKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIA 39 (108)
T ss_dssp ---CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEE
T ss_pred CcccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEE
Confidence 456789999999876544 888999999999988664
No 249
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=54.94 E-value=51 Score=27.84 Aligned_cols=67 Identities=16% Similarity=0.148 Sum_probs=41.7
Q ss_pred EEEEcCCCcCCCeecCCceEEEEEecEEEEEEe-eCCeE---EEecCCcEEE--ECCCCeEEEEEcCCceEEE
Q 021654 217 IVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNL-TKGER---FDLTVGDYLF--TPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 217 ~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~-~~~~~---~~L~pGD~v~--IP~g~~H~~~n~gd~~~~i 283 (309)
..++++|...-..-.+....++|++|.+.+... .+|+. ..+.|||++- +.....+.+.+.+++.++.
T Consensus 34 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~l~~~~~~~~~A~~~~~v~~ 106 (250)
T 3e6c_C 34 IRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATAMEPTRTCW 106 (250)
T ss_dssp EEEECTTCEEECTTCCCCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECCCSCCSCCEEEEESSSEEEEE
T ss_pred EEEECCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEeeecCCCCceEEEEcccEEEEE
Confidence 445666665533333455678999999998543 23333 5678999773 2222566777777777653
No 250
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=54.71 E-value=28 Score=28.47 Aligned_cols=68 Identities=15% Similarity=0.043 Sum_probs=42.2
Q ss_pred EEEEcCCCcCCCeecCCceEEEEEecEEEEEEe-eCCe---EEEecCCcEEEE-----CCCCeEEEEEcCCceEEEE
Q 021654 217 IVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNL-TKGE---RFDLTVGDYLFT-----PAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 217 ~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~-~~~~---~~~L~pGD~v~I-----P~g~~H~~~n~gd~~~~i~ 284 (309)
...+++|...-..-.+....++|++|.+.+... .+|+ ...+.|||++=. .....+.+.+.+++.++..
T Consensus 24 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~v~~i 100 (216)
T 4ev0_A 24 RRLYPQGKPIFYQGDLGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERSASAVAVEDTELLAL 100 (216)
T ss_dssp EEEECTTCEEECTTCBCCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCSSEEEESSSEEEEEE
T ss_pred EEEeCCCCEEEeCCCCCCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcceEEEEcCCEEEEEE
Confidence 345666665533333455678999999998643 2343 367889997732 2223456777777776533
No 251
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=54.71 E-value=94 Score=26.02 Aligned_cols=35 Identities=29% Similarity=0.307 Sum_probs=26.1
Q ss_pred CcEEEEEe---CcccHHHHHHHHHHHHhCCCcEEEecCC
Q 021654 12 PLKIIAGA---DSFGAELKDALVSHLRSLNIDVEDLGTS 47 (309)
Q Consensus 12 ~mki~i~~---D~~g~~lk~~l~~~l~~~g~ev~d~G~~ 47 (309)
+-||++++ |.--+. |+.+...|+..||+|+|+|.+
T Consensus 88 ~~~vll~~~~gd~H~iG-~~~va~~l~~~G~~v~~LG~~ 125 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIG-KNLVAMMLESGGFTVYNLGVD 125 (210)
T ss_dssp CCEEEEEEBTTCCCCHH-HHHHHHHHHHTTCEEEECCSS
T ss_pred CCEEEEEeCCCcccHHH-HHHHHHHHHHCCCEEEECCCC
Confidence 34788886 332222 477888899999999999975
No 252
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=54.52 E-value=63 Score=23.92 Aligned_cols=37 Identities=19% Similarity=0.175 Sum_probs=26.0
Q ss_pred CCCCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEec
Q 021654 7 AAAPHPLKIIAGADSFGAELKDALVSHLRSLNIDVEDLG 45 (309)
Q Consensus 7 ~~~~~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~G 45 (309)
+...++|||.|..|+. ...+.+.+.|++.|++|.-+.
T Consensus 2 s~~~~~~~ilivdd~~--~~~~~l~~~L~~~~~~v~~~~ 38 (137)
T 3hdg_A 2 SLREVALKILIVEDDT--DAREWLSTIISNHFPEVWSAG 38 (137)
T ss_dssp -----CCCEEEECSCH--HHHHHHHHHHHTTCSCEEEES
T ss_pred CccccccEEEEEeCCH--HHHHHHHHHHHhcCcEEEEEC
Confidence 3445678999999985 567888999998888887543
No 253
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=53.80 E-value=47 Score=26.88 Aligned_cols=69 Identities=14% Similarity=0.077 Sum_probs=42.3
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEe-eCCe---EEEecCCcEEEEC----C--CCeEEEEEcCCceEEEE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNL-TKGE---RFDLTVGDYLFTP----A--GDVHRVKYYEETEFFIK 284 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~-~~~~---~~~L~pGD~v~IP----~--g~~H~~~n~gd~~~~i~ 284 (309)
...++++|...-..-.+....++|++|.+.+... .+|+ ...+.|||++=.. . ...+.+.+.+++.++..
T Consensus 20 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~~~~v~~i 98 (210)
T 3ryp_A 20 HIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEI 98 (210)
T ss_dssp EEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCSSEEEESSCEEEEEE
T ss_pred EEEEeCCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHHhcCCCCceEEEEECCcEEEEEE
Confidence 3456666665533333455679999999998543 2343 3567899987321 2 23456777777776543
No 254
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=53.55 E-value=59 Score=29.61 Aligned_cols=59 Identities=12% Similarity=0.142 Sum_probs=35.0
Q ss_pred EEEEEcCCC---cCCCeecCCceE-EEEEe----cEEEEEEeeCCeE--EEecCCcEEEECCCCeEEEE
Q 021654 216 AIVRFKAGS---VEPAHHHTFGHD-LVVLQ----GKKSVWNLTKGER--FDLTVGDYLFTPAGDVHRVK 274 (309)
Q Consensus 216 ~~~~l~pG~---~~p~H~H~~~e~-vyVls----G~l~v~i~~~~~~--~~L~pGD~v~IP~g~~H~~~ 274 (309)
....+.||+ ..|+|.|...-+ +|--+ |.+-=.+...+++ ..+.-||.+.+|++-+|..-
T Consensus 183 g~evltpgg~WSSyPpHkHDrr~EeyyYF~l~~~gfv~q~~g~p~Etrhi~V~n~daVlvP~wh~h~~~ 251 (282)
T 1xru_A 183 GLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVFHMMGQPQETRHIVMHNEQAVISPSWSIHSGV 251 (282)
T ss_dssp EEEEECTTCCEESCSEEECTTEEEEEEEESCCTTCCEEEEEEETTEEEEEEECSSEEEEECTTCEEEEE
T ss_pred EEEEEeCCCCcCCCCCccCCCCceEEEEEEeCCCCEEEEEeCCCCCeeEEEEECCCEEEeCCCCCCCCC
Confidence 345666764 359999985333 33221 2111112344444 56799999999987788744
No 255
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=53.50 E-value=25 Score=27.41 Aligned_cols=64 Identities=17% Similarity=0.117 Sum_probs=39.0
Q ss_pred EEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEE-----CCCCeEEEEEcCCceEE
Q 021654 218 VRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFT-----PAGDVHRVKYYEETEFF 282 (309)
Q Consensus 218 ~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~I-----P~g~~H~~~n~gd~~~~ 282 (309)
..+++|..+-..-.+...+++|++|.+.+.. .+.....+.+||++=. .....+.+.+.+++.++
T Consensus 64 ~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~-~~~~~~~~~~G~~fGe~~~~~~~~~~~~v~A~~~~~~~ 132 (154)
T 3pna_A 64 VSFIAGETVIQQGDEGDNFYVIDQGEMDVYV-NNEWATSVGEGGSFGELALIYGTPRAATVKAKTNVKLW 132 (154)
T ss_dssp EEECTTCEEECTTSCCCEEEEEEESCEEEEE-TTEEEEEECTTCEECCHHHHHCCCCSSEEEESSCEEEE
T ss_pred EEECCCCEEEeCCCCCCeEEEEEecEEEEEE-CCEEEEEecCCCEeeehHhhcCCCcceEEEECcceEEE
Confidence 3445555442222345567899999999964 2345577999997532 22234467777776664
No 256
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=53.32 E-value=60 Score=24.00 Aligned_cols=35 Identities=23% Similarity=0.143 Sum_probs=25.7
Q ss_pred CCCCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 7 AAAPHPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 7 ~~~~~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
.....++||.|..|+. ...+.++..|+..||+|+.
T Consensus 4 ~~~~~~~~iLivdd~~--~~~~~l~~~L~~~g~~v~~ 38 (140)
T 3cg0_A 4 TASDDLPGVLIVEDGR--LAAATLRIQLESLGYDVLG 38 (140)
T ss_dssp ----CCCEEEEECCBH--HHHHHHHHHHHHHTCEEEE
T ss_pred ccCCCCceEEEEECCH--HHHHHHHHHHHHCCCeeEE
Confidence 3445668999999985 5678888999988999874
No 257
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=52.89 E-value=22 Score=32.17 Aligned_cols=101 Identities=18% Similarity=0.237 Sum_probs=64.4
Q ss_pred CCcEEEEEeCccc-----HHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCCceEEEE----ecCchh
Q 021654 11 HPLKIIAGADSFG-----AELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSDTTTRGLVA----CGTGVG 81 (309)
Q Consensus 11 ~~mki~i~~D~~g-----~~lk~~l~~~l~~~g~ev~d~G~~~y~~~a~~va~~v~~~~~~~~~~~gi~~----CgtG~G 81 (309)
+-.|+=|.+|+-= .++. +..+.|.+.|+.|+-+-++| ..+|+++.+. |. + .|.- =|||+|
T Consensus 104 ~~iKlEv~~d~~~llpD~~~tv-~aa~~L~~~Gf~Vlpy~~dd-----~~~akrl~~~---G~-~-aVmPlg~pIGsG~G 172 (265)
T 1wv2_A 104 NLVKLEVLADQKTLFPNVVETL-KAAEQLVKDGFDVMVYTSDD-----PIIARQLAEI---GC-I-AVMPLAGLIGSGLG 172 (265)
T ss_dssp CEEEECCBSCTTTCCBCHHHHH-HHHHHHHTTTCEEEEEECSC-----HHHHHHHHHS---CC-S-EEEECSSSTTCCCC
T ss_pred CeEEEEeecCccccCcCHHHHH-HHHHHHHHCCCEEEEEeCCC-----HHHHHHHHHh---CC-C-EEEeCCccCCCCCC
Confidence 3467777777641 1122 23345667799999754433 3445555441 32 2 3333 278887
Q ss_pred hhh-------hh-cCCCceEEEEeCCHHHHHHhHhhcCceEeEeccccCC
Q 021654 82 VAI-------FA-NKNPGVFATTCLTPADALNTRSINNCNVLAVSGMSTS 123 (309)
Q Consensus 82 ~~i-------aa-NK~~giraa~~~~~~~A~~~r~hN~aNvl~lg~~~~~ 123 (309)
++- .. -++|=|-.|=+.++.+|..+-+. .+.-+.+|..++.
T Consensus 173 i~~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~AmeL-GAdgVlVgSAI~~ 221 (265)
T 1wv2_A 173 ICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMEL-GCEAVLMNTAIAH 221 (265)
T ss_dssp CSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHH-TCSEEEESHHHHT
T ss_pred cCCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHHc-CCCEEEEChHHhC
Confidence 732 22 38888888889999999999886 8888888988887
No 258
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=52.71 E-value=53 Score=26.53 Aligned_cols=68 Identities=16% Similarity=0.064 Sum_probs=41.1
Q ss_pred EEEEcCCCcCCCeecCCceEEEEEecEEEEEEee-CCe---EEEecCCcEEEEC----C-----CCeEEEEEcCCceEEE
Q 021654 217 IVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLT-KGE---RFDLTVGDYLFTP----A-----GDVHRVKYYEETEFFI 283 (309)
Q Consensus 217 ~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~-~~~---~~~L~pGD~v~IP----~-----g~~H~~~n~gd~~~~i 283 (309)
..++++|...-..--+....++|++|.+.+.... +|+ ...+.|||++=.. . ...+.+.+.+++.++.
T Consensus 15 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~A~~~~~v~~ 94 (207)
T 2oz6_A 15 RRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAKVECEVAE 94 (207)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEESCTTTCC-----CBCCSEEEESSCEEEEE
T ss_pred eEEECCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcccHHHhcCCCCCCCcceEEEECCcEEEEE
Confidence 3456666655332233455789999999985432 233 3577899987322 1 2345677777777654
Q ss_pred E
Q 021654 284 K 284 (309)
Q Consensus 284 ~ 284 (309)
.
T Consensus 95 i 95 (207)
T 2oz6_A 95 I 95 (207)
T ss_dssp E
T ss_pred E
Confidence 3
No 259
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=52.33 E-value=27 Score=26.52 Aligned_cols=63 Identities=13% Similarity=0.037 Sum_probs=37.1
Q ss_pred EEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEE-----CCCCeEEEEEcCCceEE
Q 021654 219 RFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFT-----PAGDVHRVKYYEETEFF 282 (309)
Q Consensus 219 ~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~I-----P~g~~H~~~n~gd~~~~ 282 (309)
.+++|...-..-.+....++|++|.+++.. .+.....+.+||++=. .....+.+.+.+++.++
T Consensus 50 ~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~-~g~~~~~~~~G~~fGe~~~l~~~~~~~~~~a~~~~~v~ 117 (139)
T 3ocp_A 50 EYGKDSCIIKEGDVGSLVYVMEDGKVEVTK-EGVKLCTMGPGKVFGELAILYNCTRTATVKTLVNVKLW 117 (139)
T ss_dssp EECSSCEEECTTSCCCEEEEEEECCEEEEE-TTEEEEEECTTCEESCHHHHHCCCCSSEEEESSCEEEE
T ss_pred ecCCCCEEEeCCCcCCEEEEEEeCEEEEEE-CCEEEEEeCCCCEeccHHHHCCCCcceEEEECcceEEE
Confidence 344444332222334567899999999943 2334578899997631 22334466777776664
No 260
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=52.24 E-value=27 Score=27.02 Aligned_cols=65 Identities=14% Similarity=0.066 Sum_probs=39.6
Q ss_pred EEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEEC-------CCCeEEEEEcCCceEEEE
Q 021654 219 RFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTP-------AGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 219 ~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP-------~g~~H~~~n~gd~~~~i~ 284 (309)
.+++|...-..--+....++|++|.+++.. .+.....+.|||++=.. ....+.+.+.+++.++..
T Consensus 54 ~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~-~~~~~~~~~~G~~fG~~~~~~~~~~~~~~~~~a~~~~~v~~i 125 (160)
T 4f8a_A 54 HCAPGDLIYHAGESVDSLCFVVSGSLEVIQ-DDEVVAILGKGDVFGDVFWKEATLAQSCANVRALTYCDLHVI 125 (160)
T ss_dssp EECTTCEEECTTSBCCEEEEEEESEEEEEE-TTEEEEEEETTCEEECCTTTCSSCCBCSSEEEESSCEEEEEE
T ss_pred eeCCCCEEEeCCCCccEEEEEEeeEEEEEE-CCEEEEEecCCCEeCcHHHhcCcccceEEEEEECCceEEEEE
Confidence 344444332222234567999999999953 23455789999987542 123446777777776533
No 261
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=51.65 E-value=26 Score=27.00 Aligned_cols=37 Identities=14% Similarity=0.036 Sum_probs=28.9
Q ss_pred cCCCCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEe
Q 021654 6 AAAAPHPLKIIAGADSFGAELKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 6 ~~~~~~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~ 44 (309)
+....+++||.|..|+. ...+.+.+.|++.||+|.-+
T Consensus 8 ~~~~~~~~~ILivdd~~--~~~~~l~~~L~~~g~~v~~~ 44 (153)
T 3hv2_A 8 VATVTRRPEILLVDSQE--VILQRLQQLLSPLPYTLHFA 44 (153)
T ss_dssp CCCCCSCCEEEEECSCH--HHHHHHHHHHTTSSCEEEEE
T ss_pred hhhccCCceEEEECCCH--HHHHHHHHHhcccCcEEEEE
Confidence 44455668999999985 56788999999999988743
No 262
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=51.48 E-value=13 Score=34.67 Aligned_cols=26 Identities=35% Similarity=0.417 Sum_probs=23.6
Q ss_pred EEEecCCcEEEECCCCeEEEEEcCCc
Q 021654 254 RFDLTVGDYLFTPAGDVHRVKYYEET 279 (309)
Q Consensus 254 ~~~L~pGD~v~IP~g~~H~~~n~gd~ 279 (309)
+++=+|||+|+++||..|...|.|-+
T Consensus 280 r~~QkpGd~Vi~~PgayH~v~n~G~~ 305 (332)
T 2xxz_A 280 RFVQRPGDLVWINAGTVHWVQATGWC 305 (332)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSSE
T ss_pred EEEECCCCEEEECCCceEEEEeccee
Confidence 67888999999999999999999853
No 263
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=51.16 E-value=50 Score=28.30 Aligned_cols=69 Identities=14% Similarity=0.077 Sum_probs=42.7
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEe-eCCe---EEEecCCcEEEEC----C--CCeEEEEEcCCceEEEE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNL-TKGE---RFDLTVGDYLFTP----A--GDVHRVKYYEETEFFIK 284 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~-~~~~---~~~L~pGD~v~IP----~--g~~H~~~n~gd~~~~i~ 284 (309)
...++++|...-..--+...+++|++|.+.+... .+|+ ...+.|||++=.. . .....+.+.+++.++..
T Consensus 70 ~~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~Ge~~~~~~~~~~~~~~~A~~~~~l~~i 148 (260)
T 3kcc_A 70 HIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEI 148 (260)
T ss_dssp EEEEECTTCEEECTTCBCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCCSEEEESSCEEEEEE
T ss_pred EEEEECCCCEEECCCCcCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehHHhCCCCCCceEEEECCCeEEEEE
Confidence 3456677766533333455679999999999643 2333 4667899987322 1 23456777777776543
No 264
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=50.06 E-value=32 Score=27.91 Aligned_cols=64 Identities=16% Similarity=0.046 Sum_probs=37.4
Q ss_pred EEcCCCcCCCeecCCceEEEEEecEEEEEEee-CCe---EEEecCCcEEEE---C-CCCeEEEEEcCCceEE
Q 021654 219 RFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLT-KGE---RFDLTVGDYLFT---P-AGDVHRVKYYEETEFF 282 (309)
Q Consensus 219 ~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~-~~~---~~~L~pGD~v~I---P-~g~~H~~~n~gd~~~~ 282 (309)
++++|...-..-.+....++|++|.+.+.... +++ ...+.|||++=. . ....+.+.+.+++.++
T Consensus 3 ~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~Ge~~~~~~~~~~~~~A~~~~~v~ 74 (195)
T 3b02_A 3 RFARKETIYLRGEEARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGEEALEGKAYRYTAEAMTEAVVQ 74 (195)
T ss_dssp EECTTCEEECTTSBCCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEECGGGGTCSBCSSEEEESSSEEEE
T ss_pred EcCCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEechhhhCCCCceeEEEECCcEEEE
Confidence 34555544322233455789999999985432 333 357889997732 1 1234466777766654
No 265
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=50.03 E-value=48 Score=28.71 Aligned_cols=43 Identities=14% Similarity=0.068 Sum_probs=26.7
Q ss_pred ccccCCCCCCcEEEEEeCccc---------HHHHHHHHHHHHhCCCcEE--Eec
Q 021654 3 ENAAAAAPHPLKIIAGADSFG---------AELKDALVSHLRSLNIDVE--DLG 45 (309)
Q Consensus 3 ~~~~~~~~~~mki~i~~D~~g---------~~lk~~l~~~l~~~g~ev~--d~G 45 (309)
|+-|.+...+|||.|..-|-- ..|-+.+++.|++.|++|. |+.
T Consensus 16 ~~~~~~~~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL~ 69 (218)
T 3rpe_A 16 ENLYFQSNAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTVD 69 (218)
T ss_dssp ---C----CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEGG
T ss_pred cccccccccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEECC
Confidence 344667777789888877752 3477888899998897765 554
No 266
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=49.42 E-value=65 Score=26.61 Aligned_cols=67 Identities=10% Similarity=0.004 Sum_probs=41.4
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEee-CCe---EEEecCCcEEEEC-----CCCeEEEEEcCCceEE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLT-KGE---RFDLTVGDYLFTP-----AGDVHRVKYYEETEFF 282 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~-~~~---~~~L~pGD~v~IP-----~g~~H~~~n~gd~~~~ 282 (309)
....+++|...-..-.+....++|++|.+.+.... +|+ ...+.|||++=.. ....+.+.+.+++.++
T Consensus 30 ~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~v~ 105 (231)
T 3e97_A 30 TERNFQPDELVVEQDAEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVGETAVLAHQERSASVRALTPVRTL 105 (231)
T ss_dssp EEEEECTTCBCCCTTCTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEESTTTTTCCCCCCEEEEESSCEEEE
T ss_pred EEEEECCCCEEEeCCCCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEeeHHHhCCCCceEEEEECCcEEEE
Confidence 34567777766444445667899999999986432 233 3678899976321 2234456666666654
No 267
>4hjh_A Phosphomannomutase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: SEP G6Q; 2.10A {Brucella melitensis BV}
Probab=49.10 E-value=30 Score=33.50 Aligned_cols=46 Identities=9% Similarity=0.057 Sum_probs=37.7
Q ss_pred CcEEEEEeCc--ccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHH
Q 021654 12 PLKIIAGADS--FGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVG 57 (309)
Q Consensus 12 ~mki~i~~D~--~g~~lk~~l~~~l~~~g~ev~d~G~~~y~~~a~~va 57 (309)
..+|+||.|. .+-.+++.+.+-|.+.|.+|+|+|.-.-|-++..+-
T Consensus 49 ~~~VvVG~D~R~ss~~~~~a~~~gl~a~Gi~V~~~g~~pTP~l~fav~ 96 (481)
T 4hjh_A 49 GDKVFVGRDLRPSSPDIAALAMGAIEDAGFTPVNCGVLPTPALSYYAM 96 (481)
T ss_dssp TCEEEEEECSSTTHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHHHH
T ss_pred CCeEEEeecCCcCHHHHHHHHHHHHHHCCCEEEEeCCcCcHHHHHHHH
Confidence 3579999995 566799999999999999999999766666655553
No 268
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=48.98 E-value=60 Score=26.71 Aligned_cols=67 Identities=15% Similarity=0.119 Sum_probs=40.2
Q ss_pred EEEcCCCcCCCeecCCceEEEEEecEEEEEEee-CCeE---EEecCCcEEEE-----CCCCeEEEEEcCCceEEEE
Q 021654 218 VRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLT-KGER---FDLTVGDYLFT-----PAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 218 ~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~-~~~~---~~L~pGD~v~I-----P~g~~H~~~n~gd~~~~i~ 284 (309)
..+++|...-..-.+....++|++|.+.+.... +++. ..+.|||++=. .....+.+.+.+++.++..
T Consensus 32 ~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~~~~~v~~i 107 (227)
T 3d0s_A 32 VDFPRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVRAVSM 107 (227)
T ss_dssp EEECTTCEEECTTCCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCHHHHSCSCCSSEEEESSCEEEEEE
T ss_pred EEeCCCCEEEcCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeHHHcCCCCceeEEEEcccEEEEEE
Confidence 345555544322233456789999999985432 3433 57889997631 2234456777777776543
No 269
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=47.88 E-value=68 Score=26.57 Aligned_cols=68 Identities=12% Similarity=0.041 Sum_probs=41.4
Q ss_pred EEEEcCCCcCCCeecCCceEEEEEecEEEEEEe-eCCe---EEEecCCcEEEE-----CCCCeEEEEEcCCceEEEE
Q 021654 217 IVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNL-TKGE---RFDLTVGDYLFT-----PAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 217 ~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~-~~~~---~~~L~pGD~v~I-----P~g~~H~~~n~gd~~~~i~ 284 (309)
..++++|...-..-.+....++|++|.+.+... .+|+ ...+.|||++=. .....+.+.+.+++.++..
T Consensus 36 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~a~~~~~v~~i 112 (237)
T 3fx3_A 36 WRSYDRGETLFLQEEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESFGEAVALRNTPYPVSAEAVTPCEVMHI 112 (237)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEECHHHHHHTCCCSSEEEESSSEEEEEE
T ss_pred EEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEechHHHhcCCCCCceEEECCceEEEEE
Confidence 345566655433333455679999999998643 2333 356789997732 2233456777777776543
No 270
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=47.70 E-value=54 Score=27.02 Aligned_cols=49 Identities=12% Similarity=-0.014 Sum_probs=34.0
Q ss_pred cEEEEEeCcccHH--HHHHHHHHHHh-CCCcEEEecCCCCcchhHHHHHHhhc
Q 021654 13 LKIIAGADSFGAE--LKDALVSHLRS-LNIDVEDLGTSDYYSIGAEVGRRVSS 62 (309)
Q Consensus 13 mki~i~~D~~g~~--lk~~l~~~l~~-~g~ev~d~G~~~y~~~a~~va~~v~~ 62 (309)
.+|+|.| |..+. |++.+...+-+ ..+..+|+-..+-.++..++.+.+.+
T Consensus 22 ~~iII~s-HG~~A~gl~~s~~~i~G~~~~v~av~~~~~~~~~~~~~~~~~i~~ 73 (159)
T 3mtq_A 22 RHYIFAS-HGSFANGLLNSVELILGKQPDIHTLCAYVEEEVDLTQQVEALVAR 73 (159)
T ss_dssp EEEEEEE-ETTHHHHHHHHHHHHHCCCTTEEEEEETSCSSSCHHHHHHHHHHT
T ss_pred ceEEEEe-CcHHHHHHHHHHHHHcCCCCCeEEEECCCCCHHHHHHHHHHHHHh
Confidence 4566655 65554 88887777755 36778887665434788888888876
No 271
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=47.12 E-value=27 Score=30.11 Aligned_cols=39 Identities=15% Similarity=-0.068 Sum_probs=29.8
Q ss_pred cCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCe
Q 021654 231 HTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDV 270 (309)
Q Consensus 231 H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~ 270 (309)
+....++|+++|.+++.+. +++.+.|.+||.+++.....
T Consensus 138 ~~~~~~v~~l~G~~~v~~~-~~~~~~L~~~d~l~~~~~~~ 176 (200)
T 1yll_A 138 TASTLLLFAQQDGVAISLQ-GQPRGQLAAHDCLCAEGLQG 176 (200)
T ss_dssp CCSEEEEEESSSCEEEEET-TEEEEEECTTCEEEEESCCS
T ss_pred CCCEEEEEEccCcEEEEcC-CCceeecCCCCEEEEeCCCc
Confidence 3445569999999998532 35789999999999976643
No 272
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=46.47 E-value=48 Score=28.56 Aligned_cols=64 Identities=17% Similarity=0.102 Sum_probs=38.9
Q ss_pred EEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEEC---CCC--eEEEEEcCCceEEE
Q 021654 219 RFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTP---AGD--VHRVKYYEETEFFI 283 (309)
Q Consensus 219 ~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP---~g~--~H~~~n~gd~~~~i 283 (309)
.+++|..+-..-.+...+++|++|.+.+.. .+.....+.+||++=-- .+. .+.+.+.+++.++.
T Consensus 66 ~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~-~g~~~~~l~~G~~fGe~~l~~~~~~~~tv~a~~~~~~~~ 134 (291)
T 2qcs_B 66 SFIAGETVIQQGDEGDNFYVIDQGEMDVYV-NNEWATSVGEGGSFGELALIYGTPRAATVKAKTNVKLWG 134 (291)
T ss_dssp EECTTCEEECTTSBCCEEEEEEECCEEEEE-TTEEEEEECTTCEECGGGGTCCCBCSSEEEESSCEEEEE
T ss_pred EECCCCEEEeCCCCCceEEEEeeeEEEEEE-CCeEEEEcCCCCccchHHHhcCCCCceEEEECCCEEEEE
Confidence 444554442222344567899999999964 23456889999976311 122 34667777766653
No 273
>2lci_A Protein OR36; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=46.12 E-value=13 Score=28.60 Aligned_cols=114 Identities=14% Similarity=0.184 Sum_probs=58.4
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCCceEEEEecCchh---hhhhhcC-
Q 021654 13 LKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVG---VAIFANK- 88 (309)
Q Consensus 13 mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~G~~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G---~~iaaNK- 88 (309)
|||.|--....-+|-..+++..+.+||+|-|+... .+.-..+ +.++.+ ...+.-++|..--+= |-=...|
T Consensus 1 mkililintnndelikkikkevenqgyqvrdvnds--delkkem-kklaee---knfekiliisndkqllkemleliskl 74 (134)
T 2lci_A 1 MKILILINTNNDELIKKIKKEVENQGYQVRDVNDS--DELKKEM-KKLAEE---KNFEKILIISNDKQLLKEMLELISKL 74 (134)
T ss_dssp CCCEEEEECSCHHHHHHHHHHTTTTTCEEEEECSH--HHHHHHH-HHHHHC---CSCCCEEEEESCHHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCcHHHHHHHHHHHHccCeeeeecCch--HHHHHHH-HHHHhh---cCcceEEEEcCcHHHHHHHHHHHHHh
Confidence 56665555556688889999999999999998643 2222222 223331 444444444332211 1111112
Q ss_pred -CCceEEEEeCCHHHHHHhHh-h--cCceEeEeccccCCHHHHHHHHHHHHc
Q 021654 89 -NPGVFATTCLTPADALNTRS-I--NNCNVLAVSGMSTSKESAVEILDTWLK 136 (309)
Q Consensus 89 -~~giraa~~~~~~~A~~~r~-h--N~aNvl~lg~~~~~~~~a~~i~~~~l~ 136 (309)
++--.--.-.|+..-.-+++ + -.-.| -+++..+.|..|++.|+.
T Consensus 75 gykvflllqdqdeneleefkrkiesqgyev----rkvtddeealkivrefmq 122 (134)
T 2lci_A 75 GYKVFLLLQDQDENELEEFKRKIESQGYEV----RKVTDDEEALKIVREFMQ 122 (134)
T ss_dssp TCCEEEEEECSCHHHHHHHHHHHHTTTCEE----EEECCHHHHHHHHHHHHH
T ss_pred CceeEEEeecCchhHHHHHHHHHHhCCeee----eecCChHHHHHHHHHHHH
Confidence 11112222244433333322 2 11111 137889999999999874
No 274
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=46.06 E-value=25 Score=29.31 Aligned_cols=64 Identities=9% Similarity=-0.024 Sum_probs=40.5
Q ss_pred EEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEE-----ECCCCeEEEEEcCCceEEE
Q 021654 219 RFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLF-----TPAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 219 ~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~-----IP~g~~H~~~n~gd~~~~i 283 (309)
.+++|...-..-.+...+++|++|.+.+.. .+.....+.|||++= ........+.+.+++.++.
T Consensus 34 ~~~~g~~i~~~G~~~~~~y~i~~G~v~v~~-~~~~~~~~~~g~~fGe~~l~~~~~~~~tv~a~~~~~~~~ 102 (246)
T 3of1_A 34 SVPKGATIIKQGDQGDYFYVVEKGTVDFYV-NDNKVNSSGPGSSFGELALMYNSPRAATVVATSDCLLWA 102 (246)
T ss_dssp EECTTCEEECTTCCCCEEEEEEECCEEEES-TTSCCEEECTTCEECHHHHHHTCCCSSEEEESSCEEEEE
T ss_pred EECCCCEEEecCCCCCEEEEEEeeEEEEEE-CCEEEEecCCCCeeehhHHhcCCCCCcEEEECCCeEEEE
Confidence 444554443223445677999999999964 345668899999763 1222334677777776653
No 275
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=45.99 E-value=37 Score=25.65 Aligned_cols=69 Identities=12% Similarity=0.001 Sum_probs=39.6
Q ss_pred EEEEcCCCcCCCeecCCceEEEEEecEEEEEEee-CCe---EEEecCCcEEEEC---CC--CeEEEEEcCCceEEEEE
Q 021654 217 IVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLT-KGE---RFDLTVGDYLFTP---AG--DVHRVKYYEETEFFIKW 285 (309)
Q Consensus 217 ~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~-~~~---~~~L~pGD~v~IP---~g--~~H~~~n~gd~~~~i~~ 285 (309)
..++++|...-..-.+....++|++|.+.+.... +++ ...+.|||++=.. .+ ..+.+.+.+++.++..-
T Consensus 30 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~~~~i~ 107 (149)
T 2pqq_A 30 EVTLARGDTLFHEGDPGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIGELSLFDPGPRTATGTALTEVKLLALG 107 (149)
T ss_dssp EEEECTTCEEECTTSEECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEESGGGGTSCEECSSEEEESSCEEEEEEE
T ss_pred EEEeCCCCEEECCCCCCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEechHHhcCCCCcceEEEEccceEEEEEe
Confidence 3455566554322223445789999999985432 233 3578899976221 12 23456777776665443
No 276
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=45.80 E-value=35 Score=28.18 Aligned_cols=69 Identities=12% Similarity=0.169 Sum_probs=43.0
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEe-eCCeE---EEecCCcEEE----ECC--CCeEEEEEcCCceEEEE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNL-TKGER---FDLTVGDYLF----TPA--GDVHRVKYYEETEFFIK 284 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~-~~~~~---~~L~pGD~v~----IP~--g~~H~~~n~gd~~~~i~ 284 (309)
...++++|...-..-.+....++|++|.+.+... .+|+. ..+.|||++- +.. ...+.+.+.+++.++..
T Consensus 23 ~~~~~~~g~~i~~~G~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~A~~~~~v~~i 101 (213)
T 1o5l_A 23 KVIVFRKGEIVKHQDDPIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQIIASGFIFSSEPRFPVNVVAGENSKILSI 101 (213)
T ss_dssp EEEEECTTCEEECTTCBCCEEEEEEESCEEEEEECTTSCEEEEEEECSSEESSGGGTTSSSCBCSSEEEESSSEEEEEE
T ss_pred EEEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEeeeHHHhcCCCCceEEEEEccceEEEEE
Confidence 3456677766543333455678999999998543 23443 5688999762 111 24557788887776543
No 277
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=45.72 E-value=88 Score=23.03 Aligned_cols=30 Identities=20% Similarity=-0.010 Sum_probs=24.9
Q ss_pred CcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 12 PLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 12 ~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
++||.|..|+. ...+.+++.|+..||+|.-
T Consensus 3 ~~~ilivdd~~--~~~~~l~~~L~~~g~~v~~ 32 (140)
T 2qr3_A 3 LGTIIIVDDNK--GVLTAVQLLLKNHFSKVIT 32 (140)
T ss_dssp CCEEEEECSCH--HHHHHHHHHHTTTSSEEEE
T ss_pred CceEEEEeCCH--HHHHHHHHHHHhCCcEEEE
Confidence 47899998884 5678899999999998874
No 278
>2fts_A Gephyrin; gephyrin, neuroreceptor anchoring, structu protein; 2.41A {Rattus norvegicus} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 2fu3_A 1t3e_A
Probab=45.50 E-value=18 Score=34.71 Aligned_cols=48 Identities=13% Similarity=0.225 Sum_probs=35.4
Q ss_pred HHHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCCceEEEEecCchh
Q 021654 28 DALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVG 81 (309)
Q Consensus 28 ~~l~~~l~~~g~ev~d~G~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G 81 (309)
..|...|++.|++++++|. ++...+...+.+++.+ +|.-|+--|+|.|
T Consensus 211 ~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~------~DlVittGG~s~g 260 (419)
T 2fts_A 211 STLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISR------ADVIITSGGVSMG 260 (419)
T ss_dssp HHHHHHHHTTTCCEEEEEEECSSHHHHHHHHHHHHHH------CSEEEEESCCSSS
T ss_pred HHHHHHHHHCCCEEEEEeecCCCHHHHHHHHHHHHhc------CCEEEEcCCCcCC
Confidence 3577788899999999996 4566676767666543 6777777777776
No 279
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=44.74 E-value=70 Score=26.64 Aligned_cols=68 Identities=10% Similarity=-0.038 Sum_probs=40.6
Q ss_pred EEEcCCCcCCCeecCCceEEEEEecEEEEEEe-eCCe---EEEecCCcEEEE----CC-C-CeEEEEEcCCceEEEEE
Q 021654 218 VRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNL-TKGE---RFDLTVGDYLFT----PA-G-DVHRVKYYEETEFFIKW 285 (309)
Q Consensus 218 ~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~-~~~~---~~~L~pGD~v~I----P~-g-~~H~~~n~gd~~~~i~~ 285 (309)
.++++|...-..-.+....++|++|.+.+... .+|+ ...+.|||++=. .. . ..+.+.+.+++.++..-
T Consensus 46 ~~~~~ge~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG~~~~~~~~~~~~~~~~A~~~~~v~~i~ 123 (232)
T 1zyb_A 46 IKHKAGETIIKSGNPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAHTEVHTVCIS 123 (232)
T ss_dssp EEECTTCEEECTTSBCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEECGGGGSSSCCBCSSEEEESSCEEEEEEE
T ss_pred EEECCCCEEECCCCcccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeeeehHHhCCCCCCceEEEEccceEEEEEE
Confidence 34555554433223445678999999998532 2232 357789997622 22 2 45677888887776443
No 280
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=44.73 E-value=32 Score=26.43 Aligned_cols=34 Identities=21% Similarity=0.100 Sum_probs=26.0
Q ss_pred CCCCCcEEEEEeCccc-H--HHHHHHHHHHHhCCCcE
Q 021654 8 AAPHPLKIIAGADSFG-A--ELKDALVSHLRSLNIDV 41 (309)
Q Consensus 8 ~~~~~mki~i~~D~~g-~--~lk~~l~~~l~~~g~ev 41 (309)
...+++||++.|...- . =|++.|++.+++.|+++
T Consensus 17 ~~~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~ 53 (113)
T 1tvm_A 17 FQGSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPV 53 (113)
T ss_dssp CSCSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCE
T ss_pred hcccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 3445578999999752 2 26999999999999874
No 281
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=44.46 E-value=39 Score=27.86 Aligned_cols=67 Identities=13% Similarity=0.006 Sum_probs=42.3
Q ss_pred EEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEEC----C---CCeEEEEEcCCceEEEE
Q 021654 217 IVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTP----A---GDVHRVKYYEETEFFIK 284 (309)
Q Consensus 217 ~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP----~---g~~H~~~n~gd~~~~i~ 284 (309)
...+.||..+-..--+....++|++|.+.+.. .+.....+.+||++=-. . .....+.+.+++.++..
T Consensus 100 ~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~-~~~~~~~l~~G~~fGe~~~~~~~~~~~~~~v~a~~~~~l~~i 173 (212)
T 3ukn_A 100 TSFCAPGEFLIRQGDALQAIYFVCSGSMEVLK-DNTVLAILGKGDLIGSDSLTKEQVIKTNANVKALTYCDLQYI 173 (212)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEECCEEEES-SSCEEEEECTTCEEECSCCSSSSCCBBCSEEEESSCEEEEEE
T ss_pred eEEeCCCCEEEECCCcccEEEEEEecEEEEEE-CCeEEEEecCCCCcCcHHhccCCCCCcceEEEEcccEEEEEE
Confidence 44666776553322335567999999999953 34456789999977422 1 22345677777776533
No 282
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=44.38 E-value=68 Score=27.93 Aligned_cols=65 Identities=8% Similarity=0.079 Sum_probs=42.3
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCCC----------CcchhHHHHHH-h-hcCCCCCCCceEEEEecCch
Q 021654 13 LKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTSD----------YYSIGAEVGRR-V-SSSDSSDTTTRGLVACGTGV 80 (309)
Q Consensus 13 mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~G~~~----------y~~~a~~va~~-v-~~~~~~~~~~~gi~~CgtG~ 80 (309)
-||+|.+- ..-++-+.++++|++.|++|++..... -++.-..+++. + .. ..+|--|+.| |.+
T Consensus 118 ~rvglltp-y~~~~~~~~~~~l~~~Giev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~adaivL~C-T~l 191 (240)
T 3ixl_A 118 RRVALATA-YIDDVNERLAAFLAEESLVPTGCRSLGITGVEAMARVDTATLVDLCVRAFEAA----PDSDGILLSS-GGL 191 (240)
T ss_dssp SEEEEEES-SCHHHHHHHHHHHHHTTCEEEEEEECCCCCHHHHHTCCHHHHHHHHHHHHHTS----TTCSEEEEEC-TTS
T ss_pred CEEEEEeC-ChHHHHHHHHHHHHHCCCEEeccccCCCCCcchhhcCCHHHHHHHHHHHhhcC----CCCCEEEEeC-CCC
Confidence 48999986 456788899999999999999865432 12233444555 5 43 4455555555 776
Q ss_pred hhh
Q 021654 81 GVA 83 (309)
Q Consensus 81 G~~ 83 (309)
...
T Consensus 192 ~~l 194 (240)
T 3ixl_A 192 LTL 194 (240)
T ss_dssp CCT
T ss_pred chh
Confidence 554
No 283
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=44.08 E-value=35 Score=28.36 Aligned_cols=53 Identities=15% Similarity=-0.009 Sum_probs=33.4
Q ss_pred CCceEEEEEecEEEEEEeeCCeEEEecCCcEEE-----ECCCCeEEEEEcCCceEEEE
Q 021654 232 TFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLF-----TPAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 232 ~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~-----IP~g~~H~~~n~gd~~~~i~ 284 (309)
+...+++|++|.+++....++....+.+||++= -.......+.+.+++.++..
T Consensus 165 ~~~~~y~I~~G~v~v~~~~~~~~~~l~~g~~fGe~~~~~~~~~~~~v~a~~~~~~~~i 222 (246)
T 3of1_A 165 QGENFYLIEYGAVDVSKKGQGVINKLKDHDYFGEVALLNDLPRQATVTATKRTKVATL 222 (246)
T ss_dssp BCCEEEEEEECEEEEEETTTEEEEEEETTCEECHHHHHHTCBCSSEEEESSCEEEEEE
T ss_pred cCCEEEEEEecEEEEEEcCCceEEEcCCCCcccHHHHhCCCCcccEEEECCCEEEEEE
Confidence 345668999999999643222568899999762 11112235677777666533
No 284
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=44.07 E-value=8.5 Score=29.90 Aligned_cols=23 Identities=26% Similarity=0.216 Sum_probs=19.9
Q ss_pred CCceEEEEecCchhhhhhhcCCC
Q 021654 68 TTTRGLVACGTGVGVAIFANKNP 90 (309)
Q Consensus 68 ~~~~gi~~CgtG~G~~iaaNK~~ 90 (309)
+.-+-+|+|+.|...||.+||.+
T Consensus 5 ~~mkIlL~C~aGmSTsllv~km~ 27 (108)
T 3nbm_A 5 KELKVLVLCAGSGTSAQLANAIN 27 (108)
T ss_dssp CCEEEEEEESSSSHHHHHHHHHH
T ss_pred cCceEEEECCCCCCHHHHHHHHH
Confidence 34578999999999999999985
No 285
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=43.72 E-value=24 Score=31.93 Aligned_cols=35 Identities=20% Similarity=0.113 Sum_probs=27.1
Q ss_pred CCcEEEEEeCc------ccHH-HHHHHHHHHHhCCCcEEEec
Q 021654 11 HPLKIIAGADS------FGAE-LKDALVSHLRSLNIDVEDLG 45 (309)
Q Consensus 11 ~~mki~i~~D~------~g~~-lk~~l~~~l~~~g~ev~d~G 45 (309)
++|||.+-+++ .|.+ .-..|.+.|.++||+|.=+.
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~ 42 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFT 42 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEe
Confidence 57999998854 5655 34578899999999998665
No 286
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=43.54 E-value=60 Score=25.65 Aligned_cols=65 Identities=9% Similarity=0.028 Sum_probs=44.1
Q ss_pred CCcEEEEEeCccc---HHHHHHHHHHHHhCCCcEEEecCCC-CcchhHHHHHHhhcCCCCCCCceEEEEecCc
Q 021654 11 HPLKIIAGADSFG---AELKDALVSHLRSLNIDVEDLGTSD-YYSIGAEVGRRVSSSDSSDTTTRGLVACGTG 79 (309)
Q Consensus 11 ~~mki~i~~D~~g---~~lk~~l~~~l~~~g~ev~d~G~~~-y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG 79 (309)
++..|+|.+ |.. -.+++.+...+.+..++.+|+...+ ..++-.++.+.+.+- +..+-.|+++--|
T Consensus 3 ~~igiiivs-HG~~~A~~l~~~a~~i~G~~~~~aid~~~~~~~~~~~~~i~~~i~~~---d~~~GVLiL~DmG 71 (130)
T 3gx1_A 3 AQVEVIVMM-HGRSTATSMVETVQELLSIESGIALDMPLTVEVKAMYEKLKQTVVKL---NPVKGVLILSDMG 71 (130)
T ss_dssp SSCEEEEEE-ESSSHHHHHHHHHHHHHTCCCCEEEEECTTSCHHHHHHHHHHHHHTS---CCTTCEEEEECSG
T ss_pred CceEEEEEc-CCHHHHHHHHHHHHHHcCccCEEEEEecCCCCHHHHHHHHHHHHHhh---CCCCCEEEEEeCC
Confidence 345676665 554 5599988888877789999998864 446778888888762 2334455555554
No 287
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=43.07 E-value=26 Score=27.26 Aligned_cols=33 Identities=15% Similarity=0.164 Sum_probs=26.7
Q ss_pred CCCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEE
Q 021654 8 AAPHPLKIIAGADSFGAELKDALVSHLRSLNIDVE 42 (309)
Q Consensus 8 ~~~~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~ 42 (309)
...++|||.|..|+. ...+.|++.|++.||+|+
T Consensus 32 ~~~~~~~Ilivdd~~--~~~~~l~~~L~~~g~~v~ 64 (157)
T 3hzh_A 32 DTGIPFNVLIVDDSV--FTVKQLTQIFTSEGFNII 64 (157)
T ss_dssp TTTEECEEEEECSCH--HHHHHHHHHHHHTTCEEE
T ss_pred CCCCceEEEEEeCCH--HHHHHHHHHHHhCCCeEE
Confidence 334557999999985 577889999999999986
No 288
>1g8l_A Molybdopterin biosynthesis MOEA protein; molybdenum cofactor biosynthesis, metal binding protein; 1.95A {Escherichia coli} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1fc5_A 1g8r_A 2nqu_A 2nro_A 2nqq_A 2nqk_A 2nqr_A 2nqm_A 2nqs_A 2nrp_A 2nqv_A 2nrs_A 2nqn_A
Probab=42.54 E-value=17 Score=34.77 Aligned_cols=48 Identities=25% Similarity=0.221 Sum_probs=33.4
Q ss_pred HHHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCCceEEEEecCchh
Q 021654 28 DALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVG 81 (309)
Q Consensus 28 ~~l~~~l~~~g~ev~d~G~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G 81 (309)
..|...|++.|++++++|. ++...+..++.+.+.. +|.-|+.-|+|.|
T Consensus 207 ~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~al~~a~~~------~DlvittGG~s~g 256 (411)
T 1g8l_A 207 LAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQ------ADVVISSGGVSVG 256 (411)
T ss_dssp HHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHH------CSEEEECSSSCSS
T ss_pred HHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHhhc------CCEEEECCCCCCC
Confidence 3567778889999999996 4566676666666543 5666666666655
No 289
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus}
Probab=41.34 E-value=46 Score=31.97 Aligned_cols=45 Identities=20% Similarity=0.247 Sum_probs=36.5
Q ss_pred cEEEEEeCc--ccHHHHHHHHHHHHhCCCcE-EEecCCCCcchhHHHH
Q 021654 13 LKIIAGADS--FGAELKDALVSHLRSLNIDV-EDLGTSDYYSIGAEVG 57 (309)
Q Consensus 13 mki~i~~D~--~g~~lk~~l~~~l~~~g~ev-~d~G~~~y~~~a~~va 57 (309)
-+|+||.|. .+-.+++.+.+-|.+.|.+| +|.|.-.-|-++..+-
T Consensus 49 ~~VvVG~D~R~ss~~~~~a~a~gl~~~G~~V~~~~g~~pTP~~~~av~ 96 (464)
T 1tuo_A 49 GLVVVGHDTRFLADAFARALSGHLAGMGLKVVLLKGPVPTPLLSFAVR 96 (464)
T ss_dssp CEEEEEECSSTTHHHHHHHHHHHHHHHTCEEEEESSSCCHHHHHHHHH
T ss_pred CeEEEeeCCCCCHHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHH
Confidence 479999996 47779999999999999999 5889766666655553
No 290
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=40.99 E-value=23 Score=35.21 Aligned_cols=35 Identities=31% Similarity=0.332 Sum_probs=27.3
Q ss_pred EEEecCCcEEEECCCCeEEEEEcCCceEEEEEcCcc
Q 021654 254 RFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWDGRW 289 (309)
Q Consensus 254 ~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~~~~~ 289 (309)
.++-+|||+|+++||..|...|.|- ..-+.|....
T Consensus 339 r~vQkpGd~Vi~~PgayH~v~n~G~-~~n~awN~a~ 373 (531)
T 3avr_A 339 RFIQRPGDLVWINAGTVHWVQAIGW-CNNIAWNVGP 373 (531)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSS-EEEEEEEECC
T ss_pred EEEECCCCEEEECCCceEEEEecce-eeeeEEEecc
Confidence 5788899999999999999999995 3334444433
No 291
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=40.89 E-value=48 Score=25.01 Aligned_cols=25 Identities=20% Similarity=0.232 Sum_probs=22.2
Q ss_pred EEEecCCcEEEECCCCeEEEEEcCC
Q 021654 254 RFDLTVGDYLFTPAGDVHRVKYYEE 278 (309)
Q Consensus 254 ~~~L~pGD~v~IP~g~~H~~~n~gd 278 (309)
.-.|++||.++||+|-+-...+..+
T Consensus 7 ~~~l~~G~v~vVPq~~~v~~~A~~~ 31 (93)
T 1dgw_Y 7 AATLSEGDIIVIPSSFPVALKAASD 31 (93)
T ss_dssp EEEECTTCEEEECTTCCEEEEESSS
T ss_pred hceecCCcEEEECCCCceeEEecCC
Confidence 4689999999999999999988764
No 292
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=40.54 E-value=23 Score=27.76 Aligned_cols=33 Identities=15% Similarity=0.190 Sum_probs=26.9
Q ss_pred CCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 9 APHPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 9 ~~~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
.+++|||.|.=|.. .+.+.+...|++.||+|++
T Consensus 5 ~~r~~rILiVdD~~--~~~~~l~~~L~~~G~~v~~ 37 (123)
T 2lpm_A 5 TERRLRVLVVEDES--MIAMLIEDTLCELGHEVAA 37 (123)
T ss_dssp CCCCCCEEEESSST--TTSHHHHHHHHHHCCCCCB
T ss_pred CCCCCEEEEEeCCH--HHHHHHHHHHHHCCCEEEE
Confidence 34678999999986 4668899999999999864
No 293
>3ihk_A Thiamin pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, SMR83; HET: TPP; 3.00A {Streptococcus mutans}
Probab=40.15 E-value=81 Score=27.17 Aligned_cols=62 Identities=8% Similarity=-0.037 Sum_probs=45.5
Q ss_pred EEEEEeCcccHHHH-----------------HHHHHHHHhCCCcEEEecCC-CCcchhHHHHHHhhcCCCCCCCceEEEE
Q 021654 14 KIIAGADSFGAELK-----------------DALVSHLRSLNIDVEDLGTS-DYYSIGAEVGRRVSSSDSSDTTTRGLVA 75 (309)
Q Consensus 14 ki~i~~D~~g~~lk-----------------~~l~~~l~~~g~ev~d~G~~-~y~~~a~~va~~v~~~~~~~~~~~gi~~ 75 (309)
.+.||+|.+.-.|. +..+++++++|.+++-+=++ |+.|+-.++-.++.. ...+.-+++
T Consensus 20 ~~~i~~DgGa~~l~~~g~~Pd~ivGDfDSi~~~~~~~~~~~~~~i~~~~~eKD~TD~e~Al~~a~~~----~~~~~I~i~ 95 (218)
T 3ihk_A 20 DYFVGIDKGSSFLLKNQLPLDLAIGDFDSVSAEEFKQIKAKAKKLVMAPAEKNDTDTELALKTIFDC----FGRVEIIVF 95 (218)
T ss_dssp SEEEEETHHHHHHHHTTCCCSEEEECCTTSCHHHHHHHHTTCSSEEECCSSCSSCHHHHHHHHHHHH----TSSCEEEEE
T ss_pred CEEEEEcHHHHHHHHcCCCCCEEEeCcccCCHHHHHHHHhcCCeEEECCCCCCCCHHHHHHHHHHHh----CCCCEEEEE
Confidence 47788888766554 47788899999999987664 788877766666554 345677778
Q ss_pred ecCc
Q 021654 76 CGTG 79 (309)
Q Consensus 76 CgtG 79 (309)
+++|
T Consensus 96 Ga~G 99 (218)
T 3ihk_A 96 GAFG 99 (218)
T ss_dssp SCSS
T ss_pred CCCC
Confidence 8887
No 294
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=39.92 E-value=37 Score=28.90 Aligned_cols=123 Identities=17% Similarity=0.083 Sum_probs=68.5
Q ss_pred CCCCCcE----EEEEeCcccHHHHHHHHHHHHhCCCc--EEEecCCCCcchhHHHHHHhhcCCCCCCCceEEEEecCch-
Q 021654 8 AAPHPLK----IIAGADSFGAELKDALVSHLRSLNID--VEDLGTSDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGV- 80 (309)
Q Consensus 8 ~~~~~mk----i~i~~D~~g~~lk~~l~~~l~~~g~e--v~d~G~~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~- 80 (309)
+...+|| |+.|||.. ++.-+...+.|++.|++ +-=.+.+.-|+--.+.++...+ ...-|+|+|.|.
T Consensus 16 p~~~~mkp~V~IimGS~SD-~~v~~~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~a~~------~g~~ViIa~AG~a 88 (181)
T 4b4k_A 16 PRGSHMKSLVGVIMGSTSD-WETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARE------RGLKVIIAGAGGA 88 (181)
T ss_dssp ------CCSEEEEESSGGG-HHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTT------TTCCEEEEEECSS
T ss_pred cCCCCCCccEEEEECCHhH-HHHHHHHHHHHHHcCCCeeEEEEccccChHHHHHHHHHHHh------cCceEEEEecccc
Confidence 3344566 88899885 57777888899999955 4444555567665666665443 234577777763
Q ss_pred ---hhhhhhcCCCceEEEEeCCH----HHHHHhHhh--cCceEeEeccccCCHHHHHHHHHHHHcC
Q 021654 81 ---GVAIFANKNPGVFATTCLTP----ADALNTRSI--NNCNVLAVSGMSTSKESAVEILDTWLKT 137 (309)
Q Consensus 81 ---G~~iaaNK~~giraa~~~~~----~~A~~~r~h--N~aNvl~lg~~~~~~~~a~~i~~~~l~~ 137 (309)
.-.++++-..=|.+.-+... .++-++-.- .+.-|.+++-..-|..+|--+.-.-|..
T Consensus 89 ahLpGvvAa~T~~PVIGVPv~s~~l~G~DsLlSivQMP~GvpVaTvaig~~ga~NAallA~qILa~ 154 (181)
T 4b4k_A 89 AHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQILGS 154 (181)
T ss_dssp CCHHHHHHTTCCSCEEEEECCCTTTTTHHHHHHHHTCCTTCCCEECCSSHHHHHHHHHHHHHHHTT
T ss_pred ccchhhHHhcCCCCEEEEecCCCCccchhhHHHHHhCCCCCceEEEecCCccHHHHHHHHHHHHcc
Confidence 23456666656666666432 344444332 2334455544444555555555555554
No 295
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A
Probab=39.85 E-value=61 Score=32.04 Aligned_cols=46 Identities=11% Similarity=0.137 Sum_probs=37.7
Q ss_pred EEEEEeCc--ccHHHHHHHHHHHHhCCCcEEEe---cCCCCcchhHHHHHH
Q 021654 14 KIIAGADS--FGAELKDALVSHLRSLNIDVEDL---GTSDYYSIGAEVGRR 59 (309)
Q Consensus 14 ki~i~~D~--~g~~lk~~l~~~l~~~g~ev~d~---G~~~y~~~a~~va~~ 59 (309)
+|+||.|. .+-.+++.+.+-|.+.|.+|+|+ |.-.-|.++..+-..
T Consensus 60 ~VvIG~D~R~sS~~~a~~~a~~l~a~Gi~V~~~~~~G~~pTP~l~fav~~~ 110 (572)
T 1kfi_A 60 VLFVGGDGRYFNRQAIFSIIRLAYANDISEVHVGQAGLMSTPASSHYIRKV 110 (572)
T ss_dssp EEEEEECCCTTHHHHHHHHHHHHHHTTCSEEEEEGGGCBCHHHHHHHHHHH
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHHCCCEEEEecCCCCCChHHHHHHHHHh
Confidence 79999996 56679999999999999999999 766666666666544
No 296
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=39.83 E-value=47 Score=26.68 Aligned_cols=67 Identities=10% Similarity=0.014 Sum_probs=40.4
Q ss_pred EEEcCCCcCCCeecCCceEEEEEecEEEEEEe-eCCeE---EEecCCcEEE-EC---CC--CeEEEEEcCCceEEEE
Q 021654 218 VRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNL-TKGER---FDLTVGDYLF-TP---AG--DVHRVKYYEETEFFIK 284 (309)
Q Consensus 218 ~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~-~~~~~---~~L~pGD~v~-IP---~g--~~H~~~n~gd~~~~i~ 284 (309)
..+++|...-..-.+....++|++|.+++... .+|+. ..+.|||++- +. .+ .++.+.+.+++.++..
T Consensus 33 ~~~~~g~~l~~~G~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~ge~~~~~~~~~~~~~~~a~~~~~v~~i 109 (194)
T 3dn7_A 33 KKVRKKETLLKTGEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLSDYMAFQKQQPADFYIQSVENCELLSI 109 (194)
T ss_dssp EEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEECCHHHHHHTCBCSSEEEESSCEEEEEE
T ss_pred EEEcCCCEEECCCCeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEeehHHHhcCCCCceEEEEECCEEEEEE
Confidence 34555554422223345678999999998543 23433 4578999875 21 12 3456777777777543
No 297
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=39.42 E-value=65 Score=26.05 Aligned_cols=67 Identities=10% Similarity=-0.047 Sum_probs=39.4
Q ss_pred EEEEcCCCcCCCeecCCceEEEEEecEEEEEEee-CCe---EEEecCCcEEEE-----CCCCeEEEEEcCCceEEE
Q 021654 217 IVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLT-KGE---RFDLTVGDYLFT-----PAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 217 ~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~-~~~---~~~L~pGD~v~I-----P~g~~H~~~n~gd~~~~i 283 (309)
..++++|...-..--+....++|++|.+++.... +++ ...+.|||++=. .......+.+.+++.++.
T Consensus 64 ~~~~~~ge~i~~~G~~~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~fGe~~~l~~~~~~~~v~A~~~~~v~~ 139 (187)
T 3gyd_A 64 CYAAPRDCQLLTEGDPGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAIIGEMSMIDGMPRSASCVASLPTDFAV 139 (187)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEESHHHHHHCCCCSSEEEEEEEEEEEE
T ss_pred EEEeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCeeeeHHHhCCCCeeEEEEECCCeEEEE
Confidence 3455666554333334556799999999986443 232 357889997621 222334566666666543
No 298
>1uz5_A MOEA protein, 402AA long hypothetical molybdopterin biosynthesis MOEA protein; MOEA molybdopterin, MOCF biosynthesis; 2.05A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2
Probab=39.41 E-value=20 Score=34.14 Aligned_cols=93 Identities=19% Similarity=0.180 Sum_probs=53.7
Q ss_pred HHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCCceEEEEecCchhh------h------hhhcCC---Cc
Q 021654 29 ALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGV------A------IFANKN---PG 91 (309)
Q Consensus 29 ~l~~~l~~~g~ev~d~G~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~------~------iaaNK~---~g 91 (309)
.|...|++.|++++++|. ++...+...+.+.+.+ +|.-|+--|+|.|- . +...++ ||
T Consensus 211 ~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~------~DlVittGG~s~g~~D~t~~al~~~G~~~f~~va~~PG 284 (402)
T 1uz5_A 211 ALCDAINELGGEGIFMGVARDDKESLKALIEKAVNV------GDVVVISGGASGGTKDLTASVIEELGEVKVHGIAIQPG 284 (402)
T ss_dssp HHHHHHHHHTSEEEEEEEECSSHHHHHHHHHHHHHH------CSEEEEECCC-----CHHHHHHHHHSEEEEECBSEESC
T ss_pred HHHHHHHhCCCeEEEEEEeCCCHHHHHHHHHHHhhC------CCEEEEcCCCCCCCcccHHHHHHhhCCEEEeeEeecCC
Confidence 566777888999999996 4566676666666543 67777777777662 1 112221 11
Q ss_pred eEEEEeCCHHHHHHhHhhcCceEeEeccccCCHHHHHH-HHHHHHcC
Q 021654 92 VFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVE-ILDTWLKT 137 (309)
Q Consensus 92 iraa~~~~~~~A~~~r~hN~aNvl~lg~~~~~~~~a~~-i~~~~l~~ 137 (309)
=. .++-..++.-|++|++--.......+ ++.-+|..
T Consensus 285 ~p----------~~~g~~~~~~v~~LPG~P~sa~~~~~~~v~P~L~~ 321 (402)
T 1uz5_A 285 KP----------TIIGVIKGKPVFGLPGYPTSCLTNFTLLVVPLLLR 321 (402)
T ss_dssp TT----------CEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CC----------EEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHH
Confidence 11 11123467889999998666555544 34445543
No 299
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=39.20 E-value=34 Score=30.19 Aligned_cols=36 Identities=19% Similarity=0.267 Sum_probs=26.3
Q ss_pred CCcEEEEEeC---cccHHHHHHHHHHHHhCCCcEEEecCC
Q 021654 11 HPLKIIAGAD---SFGAELKDALVSHLRSLNIDVEDLGTS 47 (309)
Q Consensus 11 ~~mki~i~~D---~~g~~lk~~l~~~l~~~g~ev~d~G~~ 47 (309)
.+-||++++= .--.. |+.+...|+..||+|+|+|..
T Consensus 122 ~~~~vlla~~~gd~HdiG-~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIG-KNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp CSCEEEEEECTTCCCCHH-HHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCeEEEEeCCCCccHHH-HHHHHHHHHHCCCEEEECCCC
Confidence 3457888863 22222 467888899999999999974
No 300
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=38.63 E-value=22 Score=27.12 Aligned_cols=31 Identities=16% Similarity=0.111 Sum_probs=24.0
Q ss_pred CCcEEEEEeCcccH--HHHHHHHHHHHhCCCcE
Q 021654 11 HPLKIIAGADSFGA--ELKDALVSHLRSLNIDV 41 (309)
Q Consensus 11 ~~mki~i~~D~~g~--~lk~~l~~~l~~~g~ev 41 (309)
+.|||.+.|+..-- =|.+.|++.+++.|+++
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~ 35 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNINA 35 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSE
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCCe
Confidence 34899999987321 37889999999999864
No 301
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=38.48 E-value=74 Score=28.10 Aligned_cols=65 Identities=15% Similarity=0.047 Sum_probs=39.0
Q ss_pred EEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCC---eEEEecCCcEE-----EECCCCeEEEEEcCCceEE
Q 021654 218 VRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKG---ERFDLTVGDYL-----FTPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 218 ~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~---~~~~L~pGD~v-----~IP~g~~H~~~n~gd~~~~ 282 (309)
..+++|..+-.--.+...+++|++|.+++.....+ ....+.+||++ +-..-..+.+.+.+++.++
T Consensus 39 ~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~fGe~~l~~~~~~~~~v~A~~~~~~~ 111 (333)
T 4ava_A 39 LRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIVGEIALLRDSPRSATVTTIEPLTGW 111 (333)
T ss_dssp EEECTTCEEECTTSBCCCEEEEEECCEEEEEECTTCCEEEEEECTTCEESHHHHHHTCBCSSEEEESSCEEEE
T ss_pred EEECCCCEEEeCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEeeHHHhcCCCCceEEEEEecCEEEE
Confidence 34555544322222345578999999998643222 35778999976 1122234567777777765
No 302
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=37.77 E-value=80 Score=22.93 Aligned_cols=31 Identities=10% Similarity=0.079 Sum_probs=25.1
Q ss_pred CcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEe
Q 021654 12 PLKIIAGADSFGAELKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 12 ~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~ 44 (309)
++||.|..|+. ...+.+++.|++.||+|.-+
T Consensus 3 ~~~ilivdd~~--~~~~~l~~~L~~~g~~v~~~ 33 (127)
T 3i42_A 3 LQQALIVEDYQ--AAAETFKELLEMLGFQADYV 33 (127)
T ss_dssp CEEEEEECSCH--HHHHHHHHHHHHTTEEEEEE
T ss_pred cceEEEEcCCH--HHHHHHHHHHHHcCCCEEEE
Confidence 46899998885 46788999999999987753
No 303
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=37.48 E-value=45 Score=26.72 Aligned_cols=100 Identities=9% Similarity=-0.018 Sum_probs=51.7
Q ss_pred HHHHHHHHhCC--CcEEEecCCCCcc-hhHHHHHHhhcCCCCCCCceEEEEecCchhhh---hhhcCCCceEEEEeCCHH
Q 021654 28 DALVSHLRSLN--IDVEDLGTSDYYS-IGAEVGRRVSSSDSSDTTTRGLVACGTGVGVA---IFANKNPGVFATTCLTPA 101 (309)
Q Consensus 28 ~~l~~~l~~~g--~ev~d~G~~~y~~-~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~~---iaaNK~~giraa~~~~~~ 101 (309)
..+.++|++.| |+|+-+.-..++. .+..+...+.. -..++ |.+.|.-+|=. ++|.+.|.....++....
T Consensus 21 ~~l~~~~~~~~~~~~v~~pdl~~~g~~~~~~l~~~~~~----~~~~~-i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~ 95 (202)
T 4fle_A 21 TTFKSWLQQHHPHIEMQIPQLPPYPAEAAEMLESIVMD----KAGQS-IGIVGSSLGGYFATWLSQRFSIPAVVVNPAVR 95 (202)
T ss_dssp HHHHHHHHHHCTTSEEECCCCCSSHHHHHHHHHHHHHH----HTTSC-EEEEEETHHHHHHHHHHHHTTCCEEEESCCSS
T ss_pred HHHHHHHHHcCCCcEEEEeCCCCCHHHHHHHHHHHHHh----cCCCc-EEEEEEChhhHHHHHHHHHhcccchheeeccc
Confidence 45777887765 7777432222222 22222222322 12233 44555555533 447778877777765433
Q ss_pred HHHHhHh--------------------------------hcCceEeEeccc---cCCHHHHHHHHH
Q 021654 102 DALNTRS--------------------------------INNCNVLAVSGM---STSKESAVEILD 132 (309)
Q Consensus 102 ~A~~~r~--------------------------------hN~aNvl~lg~~---~~~~~~a~~i~~ 132 (309)
....... ..++.+|.+=+. ++..+.++++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~LiihG~~D~~Vp~~~s~~l~~ 161 (202)
T 4fle_A 96 PFELLSDYLGENQNPYTGQKYVLESRHIYDLKAMQIEKLESPDLLWLLQQTGDEVLDYRQAVAYYT 161 (202)
T ss_dssp HHHHGGGGCEEEECTTTCCEEEECHHHHHHHHTTCCSSCSCGGGEEEEEETTCSSSCHHHHHHHTT
T ss_pred hHHHHHHhhhhhccccccccccchHHHHHHHHhhhhhhhccCceEEEEEeCCCCCCCHHHHHHHhh
Confidence 3222221 234567777554 788888877643
No 304
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=37.26 E-value=1.3e+02 Score=22.41 Aligned_cols=31 Identities=23% Similarity=0.125 Sum_probs=24.6
Q ss_pred CCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 11 HPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 11 ~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
+++||.|..|+. ...+.+.+.|++.||+|.-
T Consensus 4 ~~~~ilivdd~~--~~~~~l~~~L~~~g~~v~~ 34 (140)
T 3h5i_A 4 KDKKILIVEDSK--FQAKTIANILNKYGYTVEI 34 (140)
T ss_dssp --CEEEEECSCH--HHHHHHHHHHHHTTCEEEE
T ss_pred CCcEEEEEeCCH--HHHHHHHHHHHHcCCEEEE
Confidence 347899999986 4678899999999999874
No 305
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=36.59 E-value=33 Score=31.33 Aligned_cols=40 Identities=10% Similarity=0.048 Sum_probs=26.0
Q ss_pred cCCCCCCcEEEEEeCc------------ccHHH-HHHHHHHHHhCCCcEEEec
Q 021654 6 AAAAPHPLKIIAGADS------------FGAEL-KDALVSHLRSLNIDVEDLG 45 (309)
Q Consensus 6 ~~~~~~~mki~i~~D~------------~g~~l-k~~l~~~l~~~g~ev~d~G 45 (309)
..+..++|||++.+++ .|.+. -..|.++|.+.||+|.=+.
T Consensus 14 ~~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~ 66 (438)
T 3c48_A 14 LVPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYT 66 (438)
T ss_dssp -----CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEe
Confidence 3455677999999964 46553 3577888999999997553
No 306
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=36.46 E-value=34 Score=30.92 Aligned_cols=36 Identities=22% Similarity=0.291 Sum_probs=26.2
Q ss_pred CCcEEEEEeCcc-----cHHHHHHHHHHHHhCCCcE--EEecC
Q 021654 11 HPLKIIAGADSF-----GAELKDALVSHLRSLNIDV--EDLGT 46 (309)
Q Consensus 11 ~~mki~i~~D~~-----g~~lk~~l~~~l~~~g~ev--~d~G~ 46 (309)
++|||.|..-|- -..|.+..++.|++.|+|| +|+..
T Consensus 21 ~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~DLy~ 63 (280)
T 4gi5_A 21 QSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSDLYA 63 (280)
T ss_dssp -CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEETTT
T ss_pred hCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEEccc
Confidence 458988887663 2458889999999999765 47653
No 307
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=36.44 E-value=86 Score=30.90 Aligned_cols=33 Identities=33% Similarity=0.475 Sum_probs=26.6
Q ss_pred EEEecCCcEEEECCCCeEEEEEcCCceEEEEEcC
Q 021654 254 RFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWDG 287 (309)
Q Consensus 254 ~~~L~pGD~v~IP~g~~H~~~n~gd~~~~i~~~~ 287 (309)
.++=+|||+++++||..|.+.+.|-+. -+.|..
T Consensus 314 r~iQkPGdfVit~PgtyH~Vqs~Gf~~-niaWNv 346 (510)
T 4ask_A 314 RFVQRPGDLVWINAGTVHWVQATGWCN-NIAWNV 346 (510)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSSEE-EEEEEE
T ss_pred EEEECCCCEEEECCCceEEEEecCeee-eeEEEe
Confidence 678889999999999999999998643 344443
No 308
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=36.41 E-value=65 Score=24.18 Aligned_cols=33 Identities=15% Similarity=0.084 Sum_probs=23.6
Q ss_pred CCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 9 APHPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 9 ~~~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
..+++||.|..|+.. ..+.+...|+..||+|.-
T Consensus 5 ~~~~~~iLivd~~~~--~~~~l~~~L~~~g~~v~~ 37 (147)
T 2zay_A 5 EGKWWRIMLVDTQLP--ALAASISALSQEGFDIIQ 37 (147)
T ss_dssp ---CEEEEEECTTGG--GGHHHHHHHHHHTEEEEE
T ss_pred cCCCceEEEEeCCHH--HHHHHHHHHHHcCCeEEE
Confidence 345689999988854 557778888888998873
No 309
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus}
Probab=36.38 E-value=58 Score=31.72 Aligned_cols=45 Identities=9% Similarity=0.029 Sum_probs=35.9
Q ss_pred EEEEEeCcc--cHHHHHHHHHHHHhCCCcEEEe---cCCCCcchhHHHHH
Q 021654 14 KIIAGADSF--GAELKDALVSHLRSLNIDVEDL---GTSDYYSIGAEVGR 58 (309)
Q Consensus 14 ki~i~~D~~--g~~lk~~l~~~l~~~g~ev~d~---G~~~y~~~a~~va~ 58 (309)
+|+||.|.. +-.+++.+.+-|.+.|.+|+++ |.-.-|.++..+-.
T Consensus 64 ~VvIG~D~R~~S~~~~~~~~~gl~a~Gi~V~~~~~~G~~pTP~l~~av~~ 113 (524)
T 2z0f_A 64 PLFLAKDTHALSEPAWATALSVFAAHGIEVRVEADGDYTPTPLVSLAILE 113 (524)
T ss_dssp CEEEEECSCTTHHHHHHHHHHHHHHTTCCEEEESSSSCCCHHHHHHHHHH
T ss_pred eEEEEeCCCcchHHHHHHHHHHHHHCCCEEEEeCCCCccCcHHHHHHHHH
Confidence 699999987 5679999999999999999986 66555665555543
No 310
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=36.14 E-value=1.1e+02 Score=22.75 Aligned_cols=31 Identities=13% Similarity=-0.097 Sum_probs=25.4
Q ss_pred CCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 11 HPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 11 ~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
+++||.|..|+. ...+.+++.|+..||+|.-
T Consensus 3 ~~~~iLivdd~~--~~~~~l~~~L~~~g~~v~~ 33 (142)
T 2qxy_A 3 LTPTVMVVDESR--ITFLAVKNALEKDGFNVIW 33 (142)
T ss_dssp CCCEEEEECSCH--HHHHHHHHHHGGGTCEEEE
T ss_pred CCCeEEEEeCCH--HHHHHHHHHHHhCCCEEEE
Confidence 457899998884 5678899999999999874
No 311
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=36.05 E-value=35 Score=30.11 Aligned_cols=36 Identities=28% Similarity=0.274 Sum_probs=27.4
Q ss_pred CcEEEEEeCc-----------------ccHH-HHHHHHHHHHhCCCcEEEecCC
Q 021654 12 PLKIIAGADS-----------------FGAE-LKDALVSHLRSLNIDVEDLGTS 47 (309)
Q Consensus 12 ~mki~i~~D~-----------------~g~~-lk~~l~~~l~~~g~ev~d~G~~ 47 (309)
+|||++-++. .|.+ .-..+.+.|.++||+|.=+...
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~ 56 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAP 56 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCT
T ss_pred ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 5899999887 4544 3356788899999999877653
No 312
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=35.98 E-value=46 Score=28.92 Aligned_cols=63 Identities=13% Similarity=0.008 Sum_probs=38.5
Q ss_pred EEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEEC---CCC--eEEEEEcCCceEE
Q 021654 219 RFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTP---AGD--VHRVKYYEETEFF 282 (309)
Q Consensus 219 ~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP---~g~--~H~~~n~gd~~~~ 282 (309)
.+++|..+-..-.+...+++|++|.+++.. .+.....+.|||++=-- .+. .+.+.+.+++.++
T Consensus 66 ~~~~g~~i~~~G~~~~~~yiI~~G~v~v~~-~g~~~~~~~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~ 133 (299)
T 3shr_A 66 EYGKDSCIIKEGDVGSLVYVMEDGKVEVTK-EGVKLCTMGPGKVFGELAILYNCTRTATVKTLVNVKLW 133 (299)
T ss_dssp EECTTCEEECTTCBCCCEEEEEESCEEEEE-TTEEEEEECTTCEESCSGGGTTTBCCSEEEESSCEEEE
T ss_pred EECCCCEEEcCCCcCceEEEEEEEEEEEEE-CCEEEEEeCCCCeeeHhHHhcCCCCCcEEEEcCCeEEE
Confidence 444444432222345567899999999953 23455789999976321 122 3467777777665
No 313
>1wu2_A MOEA protein, molybdopterin biosynthesis MOEA protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.30A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1xi8_A
Probab=35.24 E-value=19 Score=34.30 Aligned_cols=47 Identities=13% Similarity=0.047 Sum_probs=29.0
Q ss_pred HHHHHHHHhCCCcEEEecC--CCCcchhHHHHHHhhcCCCCCCCceEEEEecCch
Q 021654 28 DALVSHLRSLNIDVEDLGT--SDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGV 80 (309)
Q Consensus 28 ~~l~~~l~~~g~ev~d~G~--~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~ 80 (309)
..|...|++.|++++++|. ++...+...+.+.+.+ +|.-|+--|+|.
T Consensus 214 ~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~------~DlvittGG~s~ 262 (396)
T 1wu2_A 214 IMLQGLVEKFFGEPILYGVLPDDESIIKETLEKAKNE------CDIVLITGGSAF 262 (396)
T ss_dssp HHHHHHHHHTTCEEEEEEEECSCHHHHTTHHHHHHHC------SEEEECC-----
T ss_pred HHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHhhC------CCEEEEeCCCCC
Confidence 3678888999999999996 4555666666666543 554444444443
No 314
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=35.08 E-value=87 Score=26.43 Aligned_cols=80 Identities=10% Similarity=0.102 Sum_probs=49.4
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecC---CCCcchhHHHHHHhhcCCCCCCCceEEEEecCch----hhhhh
Q 021654 13 LKIIAGADSFGAELKDALVSHLRSLNIDVEDLGT---SDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGV----GVAIF 85 (309)
Q Consensus 13 mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~G~---~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~----G~~ia 85 (309)
.-|+.||+.. ++.-++..+.|++.|+++ |+|. +.-|+--.+.++...+ . ..-++|++.|. .-.++
T Consensus 15 V~IimGS~SD-~~v~~~a~~~l~~~gi~~-ev~V~saHR~p~~l~~~~~~a~~----~--g~~ViIa~AG~aahLpgvvA 86 (173)
T 4grd_A 15 VGVLMGSSSD-WDVMKHAVAILQEFGVPY-EAKVVSAHRMPDEMFDYAEKARE----R--GLRAIIAGAGGAAHLPGMLA 86 (173)
T ss_dssp EEEEESSGGG-HHHHHHHHHHHHHTTCCE-EEEECCTTTSHHHHHHHHHHHTT----T--TCSEEEEEEESSCCHHHHHH
T ss_pred EEEEeCcHhH-HHHHHHHHHHHHHcCCCE-EEEEEccccCHHHHHHHHHHHHh----c--CCeEEEEeccccccchhhhe
Confidence 4577788774 677778888999999663 4544 4566666666666543 1 22367777773 23355
Q ss_pred hcCCCceEEEEeCCH
Q 021654 86 ANKNPGVFATTCLTP 100 (309)
Q Consensus 86 aNK~~giraa~~~~~ 100 (309)
++--.=|.+.-+..-
T Consensus 87 ~~t~~PVIgVPv~~~ 101 (173)
T 4grd_A 87 AKTTVPVLGVPVASK 101 (173)
T ss_dssp HHCCSCEEEEEECCT
T ss_pred ecCCCCEEEEEcCCC
Confidence 555555666666543
No 315
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=34.94 E-value=56 Score=27.61 Aligned_cols=100 Identities=12% Similarity=0.044 Sum_probs=56.2
Q ss_pred CCcEEEEEeCcc-----c--HHHHHHHHHHHHhC--CCcE--EEecCCCCcchhHHHHHHhhcCCCCCCCceEEEEecCc
Q 021654 11 HPLKIIAGADSF-----G--AELKDALVSHLRSL--NIDV--EDLGTSDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTG 79 (309)
Q Consensus 11 ~~mki~i~~D~~-----g--~~lk~~l~~~l~~~--g~ev--~d~G~~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG 79 (309)
++|||.+.+-|. + ..|-+.+.+.|++. |++| +|+...+.|.+.......-.. .. . |
T Consensus 3 mM~kiLiI~gSpr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~dL~~~~~P~~~~~~~~~~~~----~~--~-------~ 69 (211)
T 3p0r_A 3 AMTKVLFVKANNRPAEQAVSVKLYEAFLASYKEAHPNDTVVELDLYKEELPYVGVDMINGTFK----AG--K-------G 69 (211)
T ss_dssp -CCEEEEEECCCSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEEGGGSCCCCCCHHHHHHHHH----HH--H-------T
T ss_pred ccCEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEECCCCCCCcCCHHHHHhhhc----cC--c-------c
Confidence 457876654442 2 34778888888876 7655 788877777665443322111 00 0 0
Q ss_pred hhhhhhhcCCCceEEEEeCC-------HHHHHHhHhhcCceEeEeccc--cC-CHHHHHHHHHHHHcCCC
Q 021654 80 VGVAIFANKNPGVFATTCLT-------PADALNTRSINNCNVLAVSGM--ST-SKESAVEILDTWLKTPF 139 (309)
Q Consensus 80 ~G~~iaaNK~~giraa~~~~-------~~~A~~~r~hN~aNvl~lg~~--~~-~~~~a~~i~~~~l~~~f 139 (309)
.+.+ .....+..+...|..|.++.= +- =+...+..+|..+...+
T Consensus 70 ----------------~~~~~~~~~~~~~~~~~~~~~~~aD~iv~~~P~y~~~~p~~lK~~iD~~~~~~~ 123 (211)
T 3p0r_A 70 ----------------FDLTEEEAKAVAVADKYLNQFLEADKVVFGFPLWNLTIPAVLHTYIDYLNRAGK 123 (211)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHHHHHCSEEEEEEECBTTBCCHHHHHHHHHHCCBTT
T ss_pred ----------------ccCCHHHHhhHHHHHHHHHHHHhCCEEEEEcChhcccCCHHHHHHHHHHhccCc
Confidence 0111 234556666777777766654 32 36666777777765544
No 316
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=34.83 E-value=1.7e+02 Score=26.81 Aligned_cols=100 Identities=16% Similarity=0.030 Sum_probs=57.6
Q ss_pred CCCCCCcEEEEEeCc----ccHH--HHHHHHHHHHhCC--CcEEEecCCC-CcchhHHHHHHhhcCCCCCCCceEEEEec
Q 021654 7 AAAPHPLKIIAGADS----FGAE--LKDALVSHLRSLN--IDVEDLGTSD-YYSIGAEVGRRVSSSDSSDTTTRGLVACG 77 (309)
Q Consensus 7 ~~~~~~mki~i~~D~----~g~~--lk~~l~~~l~~~g--~ev~d~G~~~-y~~~a~~va~~v~~~~~~~~~~~gi~~Cg 77 (309)
+...++.||++...- .+|. +.+-+.+..++.| ++++-+-..+ -.++...+-+.+.+ .+| +|++.|
T Consensus 21 ~~~~~~~kIglv~~g~i~D~~f~~~~~~G~~~~~~~~G~~~~~~~~e~~~~~~d~~~~l~~l~~~-----g~d-~Ii~~g 94 (356)
T 3s99_A 21 SMAEEKLKVGFIYIGPPGDFGWTYQHDQARKELVEALGDKVETTFLENVAEGADAERSIKRIARA-----GNK-LIFTTS 94 (356)
T ss_dssp -----CEEEEEECSSCGGGSSHHHHHHHHHHHHHHHHTTTEEEEEECSCCTTHHHHHHHHHHHHT-----TCS-EEEECS
T ss_pred cccCCCCEEEEEEccCCCchhHHHHHHHHHHHHHHHhCCceEEEEEecCCCHHHHHHHHHHHHHC-----CCC-EEEECC
Confidence 344566788887642 1333 6778888888888 8877554332 23443334444443 455 777766
Q ss_pred Cchhhhh--hhcCCCceEEEEeCCHHHHHHhHhhcCceEeEeccc
Q 021654 78 TGVGVAI--FANKNPGVFATTCLTPADALNTRSINNCNVLAVSGM 120 (309)
Q Consensus 78 tG~G~~i--aaNK~~giraa~~~~~~~A~~~r~hN~aNvl~lg~~ 120 (309)
.+..-.+ +|.++|.|.-.+|... .+..||.++-.+
T Consensus 95 ~~~~~~~~~vA~~~Pdv~fv~id~~--------~~~~Nv~sv~~~ 131 (356)
T 3s99_A 95 FGYMDPTVKVAKKFPDVKFEHATGY--------KTADNMSAYNAR 131 (356)
T ss_dssp GGGHHHHHHHHTTCTTSEEEEESCC--------CCBTTEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEecc--------ccCCcEEEEEec
Confidence 6655443 4788999998888642 133566665554
No 317
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=34.72 E-value=1.4e+02 Score=23.36 Aligned_cols=107 Identities=9% Similarity=0.020 Sum_probs=59.9
Q ss_pred HHHHHHHHHHhC-CCcEEEec--CCCCcchhHHHHHHhhcCCCCCCCceEEEEecCchhhhhh---hcCCCceEEEEeCC
Q 021654 26 LKDALVSHLRSL-NIDVEDLG--TSDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGVAIF---ANKNPGVFATTCLT 99 (309)
Q Consensus 26 lk~~l~~~l~~~-g~ev~d~G--~~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~~ia---aNK~~giraa~~~~ 99 (309)
....+.+.|.+. ||.|+=+- -.+.++++..+...+..- +. +.-+.+.|...|-.++ |-+.| |++.+..+
T Consensus 23 ~~~~~~~~l~~~~g~~vi~~d~~g~~~~~~~~~~~~~~~~l---~~-~~~~~lvG~S~Gg~ia~~~a~~~p-v~~lvl~~ 97 (194)
T 2qs9_A 23 WYGWVKKELEKIPGFQCLAKNMPDPITARESIWLPFMETEL---HC-DEKTIIIGHSSGAIAAMRYAETHR-VYAIVLVS 97 (194)
T ss_dssp THHHHHHHHTTSTTCCEEECCCSSTTTCCHHHHHHHHHHTS---CC-CTTEEEEEETHHHHHHHHHHHHSC-CSEEEEES
T ss_pred HHHHHHHHHhhccCceEEEeeCCCCCcccHHHHHHHHHHHh---Cc-CCCEEEEEcCcHHHHHHHHHHhCC-CCEEEEEc
Confidence 344477888887 99998432 122334544444444431 22 1224455555554443 55677 77776655
Q ss_pred HHHH-------------------HHhHhhcCceEeEeccc---cCCHHHHHHHHHHHHcCCC
Q 021654 100 PADA-------------------LNTRSINNCNVLAVSGM---STSKESAVEILDTWLKTPF 139 (309)
Q Consensus 100 ~~~A-------------------~~~r~hN~aNvl~lg~~---~~~~~~a~~i~~~~l~~~f 139 (309)
+... ... ..+...+|.+.+. ++..+.++++.+.+ +.++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~lii~G~~D~~vp~~~~~~~~~~~-~~~~ 157 (194)
T 2qs9_A 98 AYTSDLGDENERASGYFTRPWQWEKI-KANCPYIVQFGSTDDPFLPWKEQQEVADRL-ETKL 157 (194)
T ss_dssp CCSSCTTCHHHHHTSTTSSCCCHHHH-HHHCSEEEEEEETTCSSSCHHHHHHHHHHH-TCEE
T ss_pred CCccccchhhhHHHhhhcccccHHHH-HhhCCCEEEEEeCCCCcCCHHHHHHHHHhc-CCeE
Confidence 4210 000 1134457777665 78899999888887 7655
No 318
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=34.71 E-value=36 Score=30.54 Aligned_cols=38 Identities=18% Similarity=0.066 Sum_probs=25.6
Q ss_pred CCCCcEEEEEeCc-----ccHH-HHHHHHHHHHhCCCcEEEecC
Q 021654 9 APHPLKIIAGADS-----FGAE-LKDALVSHLRSLNIDVEDLGT 46 (309)
Q Consensus 9 ~~~~mki~i~~D~-----~g~~-lk~~l~~~l~~~g~ev~d~G~ 46 (309)
..++|||.+-++. .|.+ .-..+.+.|.+.||+|.=+..
T Consensus 17 ~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~ 60 (406)
T 2gek_A 17 RGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAP 60 (406)
T ss_dssp ----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEec
Confidence 3467999999865 4543 345788889999999986654
No 319
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=34.55 E-value=73 Score=24.98 Aligned_cols=32 Identities=19% Similarity=0.263 Sum_probs=26.3
Q ss_pred CCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 10 PHPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 10 ~~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
++.|||.|.=|+. ...+.++..|++.||++++
T Consensus 10 ~k~~rILiVDD~~--~~r~~l~~~L~~~G~~~v~ 41 (134)
T 3to5_A 10 NKNMKILIVDDFS--TMRRIVKNLLRDLGFNNTQ 41 (134)
T ss_dssp CTTCCEEEECSCH--HHHHHHHHHHHHTTCCCEE
T ss_pred CCCCEEEEEeCCH--HHHHHHHHHHHHcCCcEEE
Confidence 4568999998885 5678999999999998664
No 320
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=33.37 E-value=1.4e+02 Score=21.87 Aligned_cols=34 Identities=6% Similarity=0.032 Sum_probs=26.5
Q ss_pred CCCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 8 AAPHPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 8 ~~~~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
...+++||.|..|+. ...+.+++.|+..||+|.-
T Consensus 14 ~~~~~~~ilivdd~~--~~~~~l~~~L~~~g~~v~~ 47 (137)
T 2pln_A 14 VPRGSMRVLLIEKNS--VLGGEIEKGLNVKGFMADV 47 (137)
T ss_dssp -CTTCSEEEEECSCH--HHHHHHHHHHHHTTCEEEE
T ss_pred cCCCCCeEEEEeCCH--HHHHHHHHHHHHcCcEEEE
Confidence 344557999998885 5678899999999998874
No 321
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=33.08 E-value=89 Score=25.57 Aligned_cols=69 Identities=10% Similarity=-0.008 Sum_probs=42.5
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEee-CCe---EEEecCCcEEEEC----CC--CeEEEEEcCCceEEEE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLT-KGE---RFDLTVGDYLFTP----AG--DVHRVKYYEETEFFIK 284 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~-~~~---~~~L~pGD~v~IP----~g--~~H~~~n~gd~~~~i~ 284 (309)
...++++|...-..-.+....++|++|.+.+.... +|+ ...+.|||++-.. .+ ..+.+.+.+++.++..
T Consensus 35 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~~~~v~~i 113 (230)
T 3iwz_A 35 HRRRYPTRTDVFRPGDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVGEMGLFIESDTREVILRTRTQCELAEI 113 (230)
T ss_dssp EEEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCGGGTSCCSBCCSEEEESSCEEEEEE
T ss_pred eEEEeCCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEEehhhhcCCCCceeEEEEcCcEEEEEE
Confidence 44567777665333334556789999999985422 333 3568899987422 22 3345677777776543
No 322
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=32.98 E-value=66 Score=27.17 Aligned_cols=33 Identities=12% Similarity=0.166 Sum_probs=26.8
Q ss_pred CCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEe
Q 021654 10 PHPLKIIAGADSFGAELKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 10 ~~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~ 44 (309)
.++|||.|.-|+. .+.+.+...|+..||+|.-+
T Consensus 21 ~~~~~ILivdd~~--~~~~~l~~~L~~~g~~v~~~ 53 (250)
T 3r0j_A 21 TPEARVLVVDDEA--NIVELLSVSLKFQGFEVYTA 53 (250)
T ss_dssp CSSCEEEEECSCH--HHHHHHHHHHHHTTCEEEEE
T ss_pred CCCceEEEEECCH--HHHHHHHHHHHHCCCEEEEE
Confidence 3468999999995 46788999999999998743
No 323
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=32.95 E-value=63 Score=26.16 Aligned_cols=67 Identities=16% Similarity=0.081 Sum_probs=40.2
Q ss_pred EEEcCCCcCCCeecCC--ceEEEEEecEEEEEEee-CCeE---EEecCCcEEEE----CCCCeEEEEEcCCceEEEE
Q 021654 218 VRFKAGSVEPAHHHTF--GHDLVVLQGKKSVWNLT-KGER---FDLTVGDYLFT----PAGDVHRVKYYEETEFFIK 284 (309)
Q Consensus 218 ~~l~pG~~~p~H~H~~--~e~vyVlsG~l~v~i~~-~~~~---~~L~pGD~v~I----P~g~~H~~~n~gd~~~~i~ 284 (309)
.++++|...-..-.+. ...++|++|.+.+.... +|+. ..+.|||++=. .....+.+.+.+++.++..
T Consensus 8 ~~~~~g~~i~~~g~~~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A~~~~~v~~i 84 (202)
T 2zcw_A 8 VSFKAGDVILYPGVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEAATDVRLEPL 84 (202)
T ss_dssp EEECTTCEEECSBSCCTTCCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEESSCEEEEEC
T ss_pred EEECCCCEEECCCCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEEcccEEEEEE
Confidence 3556666543333344 56789999999985432 3433 56889997632 2223456777777666533
No 324
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=32.70 E-value=1.6e+02 Score=27.49 Aligned_cols=66 Identities=8% Similarity=-0.048 Sum_probs=41.2
Q ss_pred EEEEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCe---EEEecCCcEEE-----ECCCCeEEEEEcCCceEE
Q 021654 217 IVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGE---RFDLTVGDYLF-----TPAGDVHRVKYYEETEFF 282 (309)
Q Consensus 217 ~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~---~~~L~pGD~v~-----IP~g~~H~~~n~gd~~~~ 282 (309)
...+++|..+-..-.....+++|++|.+.+....+++ ...+.+||++= ...-..+.+.+.+++.++
T Consensus 170 ~~~~~~Ge~I~~qGd~~d~~YiI~sG~v~v~~~~~G~~~~v~~l~~G~~fGe~all~~~pr~atv~A~~d~~l~ 243 (416)
T 3tnp_B 170 EKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFGELALMYNTPKAATITATSPGALW 243 (416)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEECEEEEEEECSSCEEEEEEEESCCEECGGGGTSCCCCSSEEEESSSEEEE
T ss_pred EEEeCCCCEEEeCCCCCceEEEEEeeEEEEEEecCCCEEEEEEecCCCEEeeHHHhcCCCcccEEEEccCeEEE
Confidence 3455666655433344567799999999996543443 35688999653 122234467777777664
No 325
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=32.62 E-value=1e+02 Score=23.28 Aligned_cols=33 Identities=12% Similarity=0.096 Sum_probs=23.2
Q ss_pred CCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEe
Q 021654 10 PHPLKIIAGADSFGAELKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 10 ~~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~ 44 (309)
.+.|||.|.-|+. ...+.+.+.|++.||+|.-+
T Consensus 12 ~~~~~iLivdd~~--~~~~~l~~~L~~~g~~v~~~ 44 (143)
T 3m6m_D 12 VRSMRMLVADDHE--ANRMVLQRLLEKAGHKVLCV 44 (143)
T ss_dssp ---CEEEEECSSH--HHHHHHHHHHHC--CEEEEE
T ss_pred cccceEEEEeCCH--HHHHHHHHHHHHcCCeEEEe
Confidence 3558999999985 46788999999999998743
No 326
>3p9z_A Uroporphyrinogen III cosynthase (HEMD); MCSG, PSI2, structural genomics, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.10A {Helicobacter pylori}
Probab=32.49 E-value=1.4e+02 Score=25.32 Aligned_cols=103 Identities=9% Similarity=0.007 Sum_probs=59.0
Q ss_pred EEEEeCcccHHHHHHHHHHHHhCCCcEEEecCCC--CcchhHHHHHHhhcCCCCCCCceEEEEecCchhhhhhhc--C-C
Q 021654 15 IIAGADSFGAELKDALVSHLRSLNIDVEDLGTSD--YYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGVAIFAN--K-N 89 (309)
Q Consensus 15 i~i~~D~~g~~lk~~l~~~l~~~g~ev~d~G~~~--y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~~iaaN--K-~ 89 (309)
+++.+++.. +.|.+.|++.|++|..+=.+. .++......+.+.. +..|- ++-.|..++--... + .
T Consensus 114 L~~rg~~~~----~~L~~~L~~~G~~v~~~~vY~~~~~~~~~~~~~~l~~----~~~d~--v~ftS~s~v~~~~~~~~~~ 183 (229)
T 3p9z_A 114 LYLRAKEIV----SSLDTILLEHGIDFKQAVVYENKLKHLTLSEQNALKP----KEKSI--LIFTAISHAKAFLHYFEFL 183 (229)
T ss_dssp EEEEESSCS----SCHHHHHHHTTCEEEEEEEEEEEECCCCHHHHHHHSC----CTTCE--EEECSHHHHHHHHHHSCCC
T ss_pred EEECCccch----HHHHHHHHHCCCeEEEEEEEEeeCCCccHHHHHHHhc----CCCeE--EEEECHHHHHHHHHHhCcc
Confidence 344555554 566777888999999887653 22222334445554 55554 33344444443333 2 2
Q ss_pred CceEEEEeCCHHHHHHhHhhcCceEeEeccccCCHHHHHHH
Q 021654 90 PGVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEI 130 (309)
Q Consensus 90 ~giraa~~~~~~~A~~~r~hN~aNvl~lg~~~~~~~~a~~i 130 (309)
.+++.+ |-.+.+|+.++++ +-+|. +..+-....+...+
T Consensus 184 ~~~~~~-aIG~~Ta~~l~~~-G~~v~-va~~~~~e~ll~~l 221 (229)
T 3p9z_A 184 ENYTAI-SIGNTTALYLQEQ-GIPSY-IAKKPSLEACLELA 221 (229)
T ss_dssp TTCEEE-ESSHHHHHHHHHT-TCCEE-ECSSSSHHHHHHHH
T ss_pred cCCEEE-EECHHHHHHHHHc-CCCce-eCCCCCHHHHHHHH
Confidence 355544 7888888888887 34564 56665544444433
No 327
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=32.43 E-value=1.1e+02 Score=27.03 Aligned_cols=65 Identities=9% Similarity=0.156 Sum_probs=40.7
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCCCCcc----------hhHHHHHHhhcCCCCCCCceEEEEecCchhh
Q 021654 13 LKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTSDYYS----------IGAEVGRRVSSSDSSDTTTRGLVACGTGVGV 82 (309)
Q Consensus 13 mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~G~~~y~~----------~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~ 82 (309)
-||+|.+ -..-.+-+.++++|++.|++|++.....+++ .-..+++.+.. ..+|--||.+.|++..
T Consensus 147 ~rvgvlt-p~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~g~~~~~~l~~~~~~l~~----~gadaIvLg~CT~l~~ 221 (273)
T 2xed_A 147 QRVALVT-PYMRPLAEKVVAYLEAEGFTISDWRALEVADNTEVGCIPGEQVMAAARSLDL----SEVDALVISCAVQMPS 221 (273)
T ss_dssp CEEEEEE-CSCHHHHHHHHHHHHHTTCEEEEEEECCCCBHHHHHTCCHHHHHHHHHHSCC----TTCSEEEEESSSSSCC
T ss_pred CeEEEEc-CChhhhHHHHHHHHHHCCCEEeccccCCCccchhhcccCHHHHHHHHHHHhh----CCCCEEEEcCCCCcch
Confidence 3899998 4455666799999999999998775543321 12334444433 3455555551566655
No 328
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=32.27 E-value=1.5e+02 Score=21.78 Aligned_cols=34 Identities=6% Similarity=-0.014 Sum_probs=25.9
Q ss_pred CCCCcEEEEEeCcccHHHHHHHHHHHHhCCC--cEEEe
Q 021654 9 APHPLKIIAGADSFGAELKDALVSHLRSLNI--DVEDL 44 (309)
Q Consensus 9 ~~~~mki~i~~D~~g~~lk~~l~~~l~~~g~--ev~d~ 44 (309)
..+++||.|..|+. ...+.++..|+..|+ +|.-+
T Consensus 6 ~~~~~~iLivdd~~--~~~~~l~~~l~~~~~~~~v~~~ 41 (146)
T 3ilh_A 6 TRKIDSVLLIDDDD--IVNFLNTTIIRMTHRVEEIQSV 41 (146)
T ss_dssp -CCEEEEEEECSCH--HHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCccceEEEEeCCH--HHHHHHHHHHHhcCCCeeeeec
Confidence 34567999999985 567889999999998 66543
No 329
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=32.23 E-value=67 Score=23.26 Aligned_cols=30 Identities=10% Similarity=0.156 Sum_probs=24.5
Q ss_pred CcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 12 PLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 12 ~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
++||.|..|+. ...+.++..|+..||+|.-
T Consensus 2 ~~~ilivdd~~--~~~~~l~~~l~~~g~~v~~ 31 (127)
T 2jba_A 2 ARRILVVEDEA--PIREMVCFVLEQNGFQPVE 31 (127)
T ss_dssp CCEEEEECSCH--HHHHHHHHHHHHTTCEEEE
T ss_pred CcEEEEEcCCH--HHHHHHHHHHHHCCceEEE
Confidence 46899999986 5678888999999998874
No 330
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=32.07 E-value=28 Score=31.51 Aligned_cols=80 Identities=19% Similarity=0.179 Sum_probs=49.9
Q ss_pred HHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCCceEEEE---ecCchhh------hh-hh-c-C-CCceEEEEeCCH
Q 021654 34 LRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSDTTTRGLVA---CGTGVGV------AI-FA-N-K-NPGVFATTCLTP 100 (309)
Q Consensus 34 l~~~g~ev~d~G~~~y~~~a~~va~~v~~~~~~~~~~~gi~~---CgtG~G~------~i-aa-N-K-~~giraa~~~~~ 100 (309)
|.+.|++|+.+-+.|. .+|+++.+. |..-. .-+ =|||.|+ .+ .. + + +|=|-+|=+.++
T Consensus 120 L~k~Gf~Vlpy~~~D~-----~~ak~l~~~---G~~aV-mPlg~pIGsG~Gi~~~~~L~~i~~~~~~~vPVI~~GGI~tp 190 (268)
T 2htm_A 120 LIEEDFLVLPYMGPDL-----VLAKRLAAL---GTATV-MPLAAPIGSGWGVRTRALLELFAREKASLPPVVVDAGLGLP 190 (268)
T ss_dssp HHHTTCEECCEECSCH-----HHHHHHHHH---TCSCB-EEBSSSTTTCCCSTTHHHHHHHHHTTTTSSCBEEESCCCSH
T ss_pred HHHCCCEEeeccCCCH-----HHHHHHHhc---CCCEE-EecCccCcCCcccCCHHHHHHHHHhcCCCCeEEEeCCCCCH
Confidence 4455888875443222 333443331 32211 221 2788887 22 33 2 5 888888889999
Q ss_pred HHHHHhHhhcCceEeEeccccCC
Q 021654 101 ADALNTRSINNCNVLAVSGMSTS 123 (309)
Q Consensus 101 ~~A~~~r~hN~aNvl~lg~~~~~ 123 (309)
.+|..+-+ -.|.-+.+|..++.
T Consensus 191 sDAa~Ame-LGAdgVlVgSAI~~ 212 (268)
T 2htm_A 191 SHAAEVME-LGLDAVLVNTAIAE 212 (268)
T ss_dssp HHHHHHHH-TTCCEEEESHHHHT
T ss_pred HHHHHHHH-cCCCEEEEChHHhC
Confidence 99999988 57777778888877
No 331
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=32.02 E-value=90 Score=25.70 Aligned_cols=68 Identities=10% Similarity=0.021 Sum_probs=41.8
Q ss_pred EEEEEcCCCcCCCeecCCceEEEEEecEEEEEEee-CCe---EEEecCCcEEEE-----CCCCeEEEEEcCCceEEE
Q 021654 216 AIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLT-KGE---RFDLTVGDYLFT-----PAGDVHRVKYYEETEFFI 283 (309)
Q Consensus 216 ~~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~-~~~---~~~L~pGD~v~I-----P~g~~H~~~n~gd~~~~i 283 (309)
...++++|...-..-.+....++|++|.+.+.... +|+ ...+.|||++=. .....+.+.+.+++.++.
T Consensus 34 ~~~~~~~g~~i~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~~~~~v~~ 110 (232)
T 2gau_A 34 QPFPCKKASTVFSEGDIPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGMRPYFAEETCSSTAIAVENSKVLA 110 (232)
T ss_dssp EEEEECTTCEEECTTCCCCEEEEEEESCEEEEC-----CCCEEEEECTTCEESHHHHHHTSCCSSEEEESSCEEEEE
T ss_pred eEEEECCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeeeehhhCCCCcceEEEEecceEEEE
Confidence 44567777765433334556789999999985321 222 468899997622 223455777777777653
No 332
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=31.99 E-value=33 Score=34.44 Aligned_cols=36 Identities=22% Similarity=0.272 Sum_probs=27.1
Q ss_pred CCcEEEEEe---CcccHHHHHHHHHHHHhCCCcEEEecCC
Q 021654 11 HPLKIIAGA---DSFGAELKDALVSHLRSLNIDVEDLGTS 47 (309)
Q Consensus 11 ~~mki~i~~---D~~g~~lk~~l~~~l~~~g~ev~d~G~~ 47 (309)
.+-||++++ |.--+. |+.+...|+..||+|+|+|..
T Consensus 97 ~~~kVLlatv~GD~HdiG-~~iva~~L~~~G~eVi~LG~~ 135 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIG-KNIVGVVLQCNNYEIVDLGVM 135 (579)
T ss_dssp CSCEEEEEEBTTCCCCHH-HHHHHHHHHTTTCEEEECCSS
T ss_pred CCCeEEEEECCCCCchHH-HHHHHHHHHHCCCEEEECCCC
Confidence 356899997 332222 477888899999999999985
No 333
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=31.92 E-value=1.6e+02 Score=22.11 Aligned_cols=36 Identities=8% Similarity=0.128 Sum_probs=27.0
Q ss_pred cCCCCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 6 AAAAPHPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 6 ~~~~~~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
|+...+++||.|..|+. ...+.+...|+..||+|.-
T Consensus 1 Ms~~~~~~~iLivdd~~--~~~~~l~~~L~~~g~~v~~ 36 (154)
T 2rjn_A 1 MSLNYKNYTVMLVDDEQ--PILNSLKRLIKRLGCNIIT 36 (154)
T ss_dssp ---CCSCCEEEEECSCH--HHHHHHHHHHHTTTCEEEE
T ss_pred CCCCCCCCeEEEEcCCH--HHHHHHHHHHHHcCCeEEE
Confidence 34445678999999885 5678899999999999874
No 334
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=31.91 E-value=2.5e+02 Score=24.67 Aligned_cols=81 Identities=11% Similarity=0.021 Sum_probs=47.1
Q ss_pred CcEEEEEeC--c-----ccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCCceEEEEecCchhh--
Q 021654 12 PLKIIAGAD--S-----FGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGV-- 82 (309)
Q Consensus 12 ~mki~i~~D--~-----~g~~lk~~l~~~l~~~g~ev~d~G~~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~-- 82 (309)
+.+|++..+ . .-..+-+-+.+.+++.||+++-+-+.+-.+.. ..-+.+.+ ..+ -||++++....-
T Consensus 4 ~~~Ig~v~~~g~~~d~~f~~~~~~Gi~~~~~~~g~~~~~~~~~~~~~~~-~~l~~l~~----~~~-dgIi~~~~~~~~~~ 77 (318)
T 2fqx_A 4 DFVVGMVTDSGDIDDKSFNQQVWEGISRFAQENNAKCKYVTASTDAEYV-PSLSAFAD----ENM-GLVVACGSFLVEAV 77 (318)
T ss_dssp CCEEEEEESSSCTTSSSHHHHHHHHHHHHHHHTTCEEEEEECCSGGGHH-HHHHHHHH----TTC-SEEEEESTTTHHHH
T ss_pred CcEEEEEEcCCCCCCccHHHHHHHHHHHHHHHhCCeEEEEeCCCHHHHH-HHHHHHHH----cCC-CEEEECChhHHHHH
Confidence 457777654 1 22236678888999999998766554334443 33344443 334 478877765432
Q ss_pred hhhhcCCCceEEEEeC
Q 021654 83 AIFANKNPGVFATTCL 98 (309)
Q Consensus 83 ~iaaNK~~giraa~~~ 98 (309)
.-++.++|++.-.++.
T Consensus 78 ~~~a~~~p~~p~v~id 93 (318)
T 2fqx_A 78 IETSARFPKQKFLVID 93 (318)
T ss_dssp HHHHHHCTTSCEEEES
T ss_pred HHHHHHCCCCEEEEEc
Confidence 2234556666666664
No 335
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=31.73 E-value=1.1e+02 Score=25.14 Aligned_cols=35 Identities=17% Similarity=0.120 Sum_probs=23.6
Q ss_pred CcEEEEEeCc---ccHH--HHHHHHHH-HHhCCC--cEEEecC
Q 021654 12 PLKIIAGADS---FGAE--LKDALVSH-LRSLNI--DVEDLGT 46 (309)
Q Consensus 12 ~mki~i~~D~---~g~~--lk~~l~~~-l~~~g~--ev~d~G~ 46 (309)
+|||.+.+.+ .|.. +-+.+.+. |++.|+ +++|+..
T Consensus 2 Mmkilii~gS~r~~g~t~~la~~i~~~~l~~~g~~v~~~dl~~ 44 (197)
T 2vzf_A 2 TYSIVAISGSPSRNSTTAKLAEYALAHVLARSDSQGRHIHVID 44 (197)
T ss_dssp CEEEEEEECCSSTTCHHHHHHHHHHHHHHHHSSEEEEEEEGGG
T ss_pred CceEEEEECCCCCCChHHHHHHHHHHHHHHHCCCeEEEEEccc
Confidence 4788777766 3544 66788888 888886 4556543
No 336
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=31.53 E-value=2.3e+02 Score=23.78 Aligned_cols=30 Identities=17% Similarity=0.256 Sum_probs=24.5
Q ss_pred CcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 12 PLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 12 ~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
++||.|.-|+. .+.+.|+..|+..||+|.-
T Consensus 37 ~~~ILivdd~~--~~~~~l~~~L~~~g~~v~~ 66 (249)
T 3q9s_A 37 EQRILVIEDDH--DIANVLRMDLTDAGYVVDH 66 (249)
T ss_dssp CCEEEEECSCH--HHHHHHHHHHHTTTCEEEE
T ss_pred CCEEEEEECCH--HHHHHHHHHHHHCCCEEEE
Confidence 36899999985 4678899999999997764
No 337
>3kp1_A D-ornithine aminomutase E component; 5 aminomutase (OAM), metal binding protein; HET: PLP B12 5AD; 2.01A {Clostridium sticklandii} PDB: 3kow_A* 3koy_A* 3koz_A* 3kp0_A* 3kox_A*
Probab=31.46 E-value=20 Score=36.67 Aligned_cols=40 Identities=33% Similarity=0.449 Sum_probs=28.4
Q ss_pred CCcEEEEEe---CcccHHHH---HHHHHHHHhCCCcEEEecCCCCc
Q 021654 11 HPLKIIAGA---DSFGAELK---DALVSHLRSLNIDVEDLGTSDYY 50 (309)
Q Consensus 11 ~~mki~i~~---D~~g~~lk---~~l~~~l~~~g~ev~d~G~~~y~ 50 (309)
++.||++|+ |-=-.-.| +.+...|+..||+|+|+|.+--+
T Consensus 601 ~kGKVVIATVgGD~HDIGKklVaNIVa~~LE~aGFEVIDLGvdVPp 646 (763)
T 3kp1_A 601 TPLKIVAATVGEDEHSVGLREVIDIKHGGIEKYGVEVHYLGTSVPV 646 (763)
T ss_dssp SCCEEEEEEBTTCCCCHHHHHTTSTTTTCGGGGTCEEEECCSSBCH
T ss_pred cCCEEEEEeCCCChhhhhhHHHHHHHHHHHHhCCCEEEECCCCCCH
Confidence 457899996 64444454 23357899999999999986433
No 338
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=31.38 E-value=46 Score=24.57 Aligned_cols=29 Identities=21% Similarity=0.085 Sum_probs=24.7
Q ss_pred CcEEEEEeCcccHHHHHHHHHHHHhCCCcEE
Q 021654 12 PLKIIAGADSFGAELKDALVSHLRSLNIDVE 42 (309)
Q Consensus 12 ~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~ 42 (309)
+|||.|..|+. ...+.+++.|++.||+|+
T Consensus 1 ~~~ilivdd~~--~~~~~l~~~L~~~g~~v~ 29 (134)
T 3f6c_A 1 SLNAIIIDDHP--LAIAAIRNLLIKNDIEIL 29 (134)
T ss_dssp CEEEEEECCCH--HHHHHHHHHHHHTTEEEE
T ss_pred CeEEEEEcCCH--HHHHHHHHHHhhCCcEEE
Confidence 47999999985 567889999999999887
No 339
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=30.97 E-value=66 Score=26.46 Aligned_cols=32 Identities=16% Similarity=0.202 Sum_probs=25.2
Q ss_pred CCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 10 PHPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 10 ~~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
..+|||.|..|+. .+.+.+...|+..||+|.-
T Consensus 5 ~~~~~ilivdd~~--~~~~~l~~~L~~~g~~v~~ 36 (233)
T 1ys7_A 5 VTSPRVLVVDDDS--DVLASLERGLRLSGFEVAT 36 (233)
T ss_dssp --CCEEEEECSCH--HHHHHHHHHHHHTTCEEEE
T ss_pred CCCCeEEEEeCCH--HHHHHHHHHHHhCCCEEEE
Confidence 3468999999996 5668888999989999874
No 340
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=30.97 E-value=52 Score=30.75 Aligned_cols=64 Identities=20% Similarity=0.164 Sum_probs=40.1
Q ss_pred EEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEEC---CC--CeEEEEEcC-CceEE
Q 021654 219 RFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTP---AG--DVHRVKYYE-ETEFF 282 (309)
Q Consensus 219 ~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP---~g--~~H~~~n~g-d~~~~ 282 (309)
.+++|..+-..-.+...+++|++|.+.+.....+....+.+||++=-- .+ ....+.+.+ ++.++
T Consensus 365 ~~~~g~~i~~~G~~~~~~yiI~~G~v~v~~~~~~~~~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~~~~ 434 (469)
T 1o7f_A 365 HAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFL 434 (469)
T ss_dssp ECSTTCEEECTTSCCCEEEEEEESEEEEEETTTEEEEEEETTCEECGGGGTCCSCCSSEEEESSSSEEEE
T ss_pred EecCCCEEEeCCCcCCeEEEEEEeEEEEEEcCCeeEEEecCCCEEEEehhhcCCCceEEEEEecCCEEEE
Confidence 677777664444456677999999999964322257889999976211 12 233456655 45554
No 341
>1k7k_A Hypothetical protein YGGV; MAD, His-TAG, large groove, disordered Se-Met, structural genomics, putative ribosomal protein, PSI; HET: MSE; 1.50A {Escherichia coli} SCOP: c.51.4.1 PDB: 2q16_A* 2pyu_A*
Probab=30.78 E-value=31 Score=30.32 Aligned_cols=74 Identities=18% Similarity=0.327 Sum_probs=49.7
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCC----------CCcchhHHHHHHhhcCCCCCCCceEEEEecCchhh
Q 021654 13 LKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTS----------DYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGV 82 (309)
Q Consensus 13 mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~G~~----------~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~ 82 (309)
+||++++-..+ .+ +++++.|...|++|+.+... +|.+.|..=|+.+.+ ....-++..-||+=+
T Consensus 24 ~~iv~AT~N~~-Kl-~E~~~iL~~~~iev~~~~d~~~~ei~E~g~Tf~eNA~~KA~~aa~-----~~g~pvlaDDSGL~V 96 (221)
T 1k7k_A 24 QKVVLATGNVG-KV-RELASLLSDFGLDIVAQTDLGVDSAEETGLTFIENAILKARHAAK-----VTALPAIADDSGLAV 96 (221)
T ss_dssp EEEEESCCCHH-HH-HHHHHHHGGGTEEEEETTTTTCCCCCCCCSSHHHHHHHHHHHHHH-----HHSSCEEEEEEEEEE
T ss_pred cEEEEEcCCHH-HH-HHHHHHhhhcCeEEEEhhhcCCCCcccCCCCHHHHHHHHHHHHHH-----HHCCCEEeeccEEEE
Confidence 47999998876 44 46778888888998865421 345566666666654 123347888887654
Q ss_pred hhhhcCCCceEE
Q 021654 83 AIFANKNPGVFA 94 (309)
Q Consensus 83 ~iaaNK~~gira 94 (309)
. |.|-.|||+.
T Consensus 97 d-AL~G~PGvyS 107 (221)
T 1k7k_A 97 D-VLGGAPGIYS 107 (221)
T ss_dssp G-GGTTCBGGGS
T ss_pred e-ecCCCCccee
Confidence 4 4599999864
No 342
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=30.45 E-value=70 Score=25.73 Aligned_cols=49 Identities=12% Similarity=0.030 Sum_probs=32.6
Q ss_pred cEEEEEeCcccHH--HHHHHHHHHHh-CCCcEEEecCCC-CcchhHHHHHHhhc
Q 021654 13 LKIIAGADSFGAE--LKDALVSHLRS-LNIDVEDLGTSD-YYSIGAEVGRRVSS 62 (309)
Q Consensus 13 mki~i~~D~~g~~--lk~~l~~~l~~-~g~ev~d~G~~~-y~~~a~~va~~v~~ 62 (309)
.+|+|.| |..+. +++.+...+-+ .....+|+-..+ ..++..++.+.+.+
T Consensus 4 igiii~s-HG~~A~gl~~~~~~i~G~~~~v~av~~~~~~~~~~~~~~i~~~i~~ 56 (144)
T 3lfh_A 4 KFVLIIT-HGDFGKGLLSGAEVIIGKQENVHTVGLNLGDNIEVVRKEVEKIIKE 56 (144)
T ss_dssp EEEEEEE-ETTHHHHHHHHHHHHHCCCSSEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred ceEEEEe-CcHHHHHHHHHHHHHcCCCCcEEEEEccCCCCHHHHHHHHHHHHHH
Confidence 3566665 55444 88877777755 367888887654 44677777777764
No 343
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=30.41 E-value=94 Score=26.61 Aligned_cols=64 Identities=16% Similarity=0.124 Sum_probs=34.9
Q ss_pred EEcCCCcCCCeecCCceEEEEEecEEEEEEee-CC----eEEEecCCcEEEEC---CCC--eEEEEEcCCceEE
Q 021654 219 RFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLT-KG----ERFDLTVGDYLFTP---AGD--VHRVKYYEETEFF 282 (309)
Q Consensus 219 ~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~-~~----~~~~L~pGD~v~IP---~g~--~H~~~n~gd~~~~ 282 (309)
.+.+|...-..-.+...+++|++|++.+.... ++ ....+.|||++=-. .+. ...+.+.+++.++
T Consensus 184 ~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~~~ 257 (291)
T 2qcs_B 184 QFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFGEIALLMNRPKAATVVARGPLKCV 257 (291)
T ss_dssp EECTTCEEECTTSCCCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEECSGGGTCCCCCSSEEEEEEEEEEE
T ss_pred EECCCCEEEeCCccCCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEecHHHHcCCCCcceEEEECCcEEEE
Confidence 34444433222233456789999999985322 22 25788999977321 122 2345555554443
No 344
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=30.08 E-value=80 Score=23.07 Aligned_cols=32 Identities=19% Similarity=0.170 Sum_probs=24.8
Q ss_pred CCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEe
Q 021654 11 HPLKIIAGADSFGAELKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 11 ~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~ 44 (309)
+++||.|..|+. ...+.+++.|++.||+|.-+
T Consensus 5 ~~~~ilivdd~~--~~~~~l~~~L~~~g~~v~~~ 36 (132)
T 3lte_A 5 QSKRILVVDDDQ--AMAAAIERVLKRDHWQVEIA 36 (132)
T ss_dssp --CEEEEECSCH--HHHHHHHHHHHHTTCEEEEE
T ss_pred CCccEEEEECCH--HHHHHHHHHHHHCCcEEEEe
Confidence 457899999985 56788899999999988743
No 345
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=29.90 E-value=68 Score=23.00 Aligned_cols=29 Identities=10% Similarity=0.115 Sum_probs=23.5
Q ss_pred CcEEEEEeCcccHHHHHHHHHHHHhCCCcEE
Q 021654 12 PLKIIAGADSFGAELKDALVSHLRSLNIDVE 42 (309)
Q Consensus 12 ~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~ 42 (309)
++||.|..|+. ...+.+++.|+..||+|+
T Consensus 2 ~~~ilivdd~~--~~~~~l~~~l~~~g~~vv 30 (120)
T 1tmy_A 2 GKRVLIVDDAA--FMRMMLKDIITKAGYEVA 30 (120)
T ss_dssp CCEEEEECSCH--HHHHHHHHHHHHTTCEEE
T ss_pred CceEEEEcCcH--HHHHHHHHHHhhcCcEEE
Confidence 46899998874 567888899999999965
No 346
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=29.81 E-value=42 Score=26.46 Aligned_cols=29 Identities=21% Similarity=0.217 Sum_probs=23.4
Q ss_pred CCCcEEEEEeCcccHH----HHHHHHHHHHhCCC
Q 021654 10 PHPLKIIAGADSFGAE----LKDALVSHLRSLNI 39 (309)
Q Consensus 10 ~~~mki~i~~D~~g~~----lk~~l~~~l~~~g~ 39 (309)
.+++||++.|+.. .. ++..|++.|++.|+
T Consensus 11 ~~~kkIlvVC~sG-mgTS~ml~~klkk~~~e~gi 43 (125)
T 1vkr_A 11 SHVRKIIVACDAG-MGSSAMGAGVLRKKIQDAGL 43 (125)
T ss_dssp CCCCEEEECCSSS-SHHHHHHHHHHHHHHHHTTC
T ss_pred ccccEEEEECCCc-HHHHHHHHHHHHHHHHHCCC
Confidence 3457899999984 43 68999999999998
No 347
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A*
Probab=29.61 E-value=1e+02 Score=30.50 Aligned_cols=46 Identities=13% Similarity=0.120 Sum_probs=35.0
Q ss_pred cEEEEEeCcc--cHHHHHHHHHHHHhCCCcEEEe---cCCCCcchhHHHHH
Q 021654 13 LKIIAGADSF--GAELKDALVSHLRSLNIDVEDL---GTSDYYSIGAEVGR 58 (309)
Q Consensus 13 mki~i~~D~~--g~~lk~~l~~~l~~~g~ev~d~---G~~~y~~~a~~va~ 58 (309)
-+|+||.|.. +-.+++.+.+-|.+.|.+|+++ |.-.-|-++..+-.
T Consensus 54 ~~VvVG~D~R~~s~~~~~~~a~~l~a~Gv~V~~~~~~g~~pTP~vs~av~~ 104 (561)
T 3pmg_A 54 ATLVVGGDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCIIRK 104 (561)
T ss_dssp CEEEEEECCCTTHHHHHHHHHHHHHHTTCCEEEEEEEEECCHHHHHHHHHH
T ss_pred CEEEEEeCCCccHHHHHHHHHHHHHHCCCEEEEecCCCccCHHHHHHHHHH
Confidence 4799999975 4458889999999999999999 65555555555533
No 348
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=29.40 E-value=92 Score=22.64 Aligned_cols=30 Identities=20% Similarity=0.124 Sum_probs=24.7
Q ss_pred CcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 12 PLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 12 ~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
++||.|..|+. ...+.++..|+..||+|.-
T Consensus 5 ~~~ilivdd~~--~~~~~l~~~L~~~g~~v~~ 34 (132)
T 2rdm_A 5 AVTILLADDEA--ILLLDFESTLTDAGFLVTA 34 (132)
T ss_dssp SCEEEEECSSH--HHHHHHHHHHHHTTCEEEE
T ss_pred CceEEEEcCcH--HHHHHHHHHHHHcCCEEEE
Confidence 47899998885 5668888999999999874
No 349
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=29.32 E-value=50 Score=27.79 Aligned_cols=37 Identities=11% Similarity=0.084 Sum_probs=21.6
Q ss_pred CCCCcEEEEEeC-cccHHHHHHHHHHHHhCCC-cEEEec
Q 021654 9 APHPLKIIAGAD-SFGAELKDALVSHLRSLNI-DVEDLG 45 (309)
Q Consensus 9 ~~~~mki~i~~D-~~g~~lk~~l~~~l~~~g~-ev~d~G 45 (309)
..++|||++.|| |..++.-+++.+.+++.+. .|+-.|
T Consensus 22 ~~~mmki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~G 60 (208)
T 1su1_A 22 SNAMMKLMFASDIHGSLPATERVLELFAQSGAQWLVILG 60 (208)
T ss_dssp ---CCEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECS
T ss_pred ccccEEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 344589999999 5555544566666654443 344455
No 350
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=29.18 E-value=1.6e+02 Score=21.24 Aligned_cols=30 Identities=20% Similarity=0.214 Sum_probs=24.4
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEEe
Q 021654 13 LKIIAGADSFGAELKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 13 mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~ 44 (309)
+||.|.-|+. ...+.++..|++.||+|.-+
T Consensus 3 ~~ILivdd~~--~~~~~l~~~l~~~g~~v~~~ 32 (122)
T 3gl9_A 3 KKVLLVDDSA--VLRKIVSFNLKKEGYEVIEA 32 (122)
T ss_dssp CEEEEECSCH--HHHHHHHHHHHHTTCEEEEE
T ss_pred ceEEEEeCCH--HHHHHHHHHHHHCCcEEEEe
Confidence 5899988885 46678899999999999743
No 351
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=28.98 E-value=12 Score=28.44 Aligned_cols=50 Identities=22% Similarity=0.250 Sum_probs=32.2
Q ss_pred CceEEEEEecEEEEEEeeCCeE---E--EecCCcEEE-------ECCC-------CeEEEEEcCCceEE
Q 021654 233 FGHDLVVLQGKKSVWNLTKGER---F--DLTVGDYLF-------TPAG-------DVHRVKYYEETEFF 282 (309)
Q Consensus 233 ~~e~vyVlsG~l~v~i~~~~~~---~--~L~pGD~v~-------IP~g-------~~H~~~n~gd~~~~ 282 (309)
....++|++|.+++....+++. . .+.|||++= +... ....+.+.+++.++
T Consensus 47 ~~~~y~i~~G~v~~~~~~~g~~~~~~~~~l~~G~~fGe~~l~~~~~~~~~~~~~~~~~~~~A~~~~~~~ 115 (137)
T 1wgp_A 47 VNEMLFIIRGRLESVTTDGGRSGFYNRSLLKEGDFCGDELLTWALDPKSGSNLPSSTRTVKALTEVEAF 115 (137)
T ss_dssp CSEEEEEEECCCEEECCSSCSSSSSCEEECCTTCBSSTHHHHHHHCSSCCSSSCBCSSEEEESSCBEEE
T ss_pred CCeEEEEEeeEEEEEEcCCCcceeeeeeeecCCCEecHHHHHHHhccccccccccceeEEEEeEEEEEE
Confidence 3456899999999753333333 3 888999652 3322 23577888877765
No 352
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=28.92 E-value=1.1e+02 Score=25.60 Aligned_cols=68 Identities=12% Similarity=0.077 Sum_probs=40.8
Q ss_pred EEEEcCCCcCCCeecCCceEEEEEecEEEEEEee-CCe---EEEecCCcEEEEC---CCC----eEEEEEcCCceEEEE
Q 021654 217 IVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLT-KGE---RFDLTVGDYLFTP---AGD----VHRVKYYEETEFFIK 284 (309)
Q Consensus 217 ~~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~-~~~---~~~L~pGD~v~IP---~g~----~H~~~n~gd~~~~i~ 284 (309)
..++++|...-..--+....++|++|.+.+.... +|+ ...+.|||++=.. .+. ...+.+.+++.++..
T Consensus 45 ~~~~~~ge~i~~~G~~~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G~~~~~~~~~~~~~~~~~A~~~~~v~~i 123 (243)
T 3la7_A 45 VETFERNKTIFFPGDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFGVLSLLTGNKSDRFYHAVAFTPVELLSA 123 (243)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEESCHHHHSSCCSBCCEEEEESSSEEEEEE
T ss_pred eEEECCCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEcchHHhCCCCCcceEEEEEccceEEEEE
Confidence 4566666665333334456789999999985432 333 3567899976221 122 256677777776543
No 353
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=28.18 E-value=73 Score=23.70 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=25.6
Q ss_pred CCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEec
Q 021654 11 HPLKIIAGADSFGAELKDALVSHLRSLNIDVEDLG 45 (309)
Q Consensus 11 ~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~G 45 (309)
+++||.|..|+. ...+.+++.|++.||+|.-+.
T Consensus 5 ~~~~ilivdd~~--~~~~~l~~~L~~~g~~v~~~~ 37 (136)
T 3kto_A 5 HHPIIYLVDHQK--DARAALSKLLSPLDVTIQCFA 37 (136)
T ss_dssp --CEEEEECSCH--HHHHHHHHHHTTSSSEEEEES
T ss_pred CCCeEEEEcCCH--HHHHHHHHHHHHCCcEEEEeC
Confidence 347899999985 567889999999999988543
No 354
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=28.03 E-value=36 Score=33.31 Aligned_cols=63 Identities=21% Similarity=0.223 Sum_probs=42.8
Q ss_pred eCcccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCCceEEEEecCchhhhhhhc
Q 021654 19 ADSFGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGVAIFAN 87 (309)
Q Consensus 19 ~D~~g~~lk~~l~~~l~~~g~ev~d~G~~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~~iaaN 87 (309)
+|--|.++++.|.+.|+.+|..| ++-.-.-...|-.++..-.. ....-=+|+|||.+.++.-|
T Consensus 180 ~~~~G~dv~~~L~~al~r~gl~v-~v~aivNDtv~tll~~~y~~-----~~~~iglIlGTG~N~~y~e~ 242 (485)
T 3o8m_A 180 EGVEGHDVVPMLQEQIEKLNIPI-NVVALINDTTGTLVASLYTD-----PQTKMGIIIGTGVNGAYYDV 242 (485)
T ss_dssp BTCTTSBHHHHHHHHHHHTTCCE-EEEEEECHHHHHHHHHHHHC-----TTEEEEEEESSSEEEEEEEE
T ss_pred CCcCCccHHHHHHHHHHhcCCCc-eEEEEEEcHHHHHHHHhhCC-----CCcEEEEEEecCcceEEEee
Confidence 45568899999999999998764 21111123456666666554 33455579999999998764
No 355
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A
Probab=28.00 E-value=27 Score=34.02 Aligned_cols=56 Identities=21% Similarity=0.181 Sum_probs=37.9
Q ss_pred HHHHHHHHHHh-------C-CCcEEEecCC----CCcchhHHHHHHhhcCCCCCCCceEEEEecCchhhhhhhcC
Q 021654 26 LKDALVSHLRS-------L-NIDVEDLGTS----DYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGVAIFANK 88 (309)
Q Consensus 26 lk~~l~~~l~~-------~-g~ev~d~G~~----~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~~iaaNK 88 (309)
+-+.+-..|+. . .--|+=+|.. .|++.|.++++.++. . .. .|+||.|.|++-++||
T Consensus 127 it~~vf~~Lrna~~~~p~r~~~IvV~cGSs~~~p~yye~A~eLGr~LA~----~--G~-~LVtGGG~GLMeAa~a 194 (462)
T 3gh1_A 127 ITNLVFGILRNAGALIPGATPNLVVCWGGHSINEVEYQYTREVGHELGL----R--EL-NICTGCGPGAMEGPMK 194 (462)
T ss_dssp HHHHHHHHHHHTTCCCTTCCSCEEEEECCSSCCHHHHHHHHHHHHHHHH----T--TC-EEEECCSSGGGTHHHH
T ss_pred HHHHHHHHHhhccccCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH----C--CC-EEEeCCcHHHHHHHHH
Confidence 44666777775 1 2334567765 388899999999986 1 12 4788888998866554
No 356
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=27.76 E-value=28 Score=31.92 Aligned_cols=40 Identities=15% Similarity=0.066 Sum_probs=32.4
Q ss_pred EEEEecCchhhhhhhcCCCceEEEEeCCHHHHHHhHhhcC
Q 021654 72 GLVACGTGVGVAIFANKNPGVFATTCLTPADALNTRSINN 111 (309)
Q Consensus 72 gi~~CgtG~G~~iaaNK~~giraa~~~~~~~A~~~r~hN~ 111 (309)
.=+.||+|.=..-.+.++|++|+.+..-|.....+|++-.
T Consensus 184 ~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~ 223 (353)
T 4a6d_A 184 CDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFS 223 (353)
T ss_dssp EEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSC
T ss_pred EeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhh
Confidence 3456788877778899999999998888888888887643
No 357
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=27.69 E-value=53 Score=26.91 Aligned_cols=35 Identities=17% Similarity=0.076 Sum_probs=22.7
Q ss_pred CCcEEEEEeC-cccHHHHHHHHHHHHhCCCcEE-Eec
Q 021654 11 HPLKIIAGAD-SFGAELKDALVSHLRSLNIDVE-DLG 45 (309)
Q Consensus 11 ~~mki~i~~D-~~g~~lk~~l~~~l~~~g~ev~-d~G 45 (309)
++|||++.|| |.++..-+.+.+.+++.+.+++ -.|
T Consensus 4 ~~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~G 40 (228)
T 1uf3_A 4 TVRYILATSNPMGDLEALEKFVKLAPDTGADAIALIG 40 (228)
T ss_dssp CCCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEES
T ss_pred ceEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECC
Confidence 4689999999 5666544566666665455544 445
No 358
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=27.65 E-value=1.6e+02 Score=20.79 Aligned_cols=29 Identities=24% Similarity=0.268 Sum_probs=23.8
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 13 LKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 13 mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
+||.|..|+. ...+.+.+.|+..||+|.-
T Consensus 6 ~~ilivdd~~--~~~~~l~~~L~~~g~~v~~ 34 (127)
T 2gkg_A 6 KKILIVESDT--ALSATLRSALEGRGFTVDE 34 (127)
T ss_dssp CEEEEECSCH--HHHHHHHHHHHHHTCEEEE
T ss_pred CeEEEEeCCH--HHHHHHHHHHHhcCceEEE
Confidence 5899998885 5678888999989998873
No 359
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=27.61 E-value=67 Score=33.30 Aligned_cols=60 Identities=10% Similarity=0.086 Sum_probs=37.3
Q ss_pred CCcEEEEEeCcc-cHH-HHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCCceEEEEecC
Q 021654 11 HPLKIIAGADSF-GAE-LKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSDTTTRGLVACGT 78 (309)
Q Consensus 11 ~~mki~i~~D~~-g~~-lk~~l~~~l~~~g~ev~d~G~~~y~~~a~~va~~v~~~~~~~~~~~gi~~Cgt 78 (309)
++.||++++=-. +.+ =|+.+...|+..||||+|+|.+.-|+ .+++++.+ .. -..|.+|++
T Consensus 603 ~r~kVvlatvg~D~HdiG~~iVa~~l~~~GfeVi~lG~~v~~e---eiv~aA~e----~~-adiVglSsl 664 (762)
T 2xij_A 603 RRPRLLVAKMGQDGHDRGAKVIATGFADLGFDVDIGPLFQTPR---EVAQQAVD----AD-VHAVGVSTL 664 (762)
T ss_dssp SCCEEEEECCSSCCCCHHHHHHHHHHHHTTCEEEECCTTCCHH---HHHHHHHH----TT-CSEEEEEEC
T ss_pred CCCEEEEEecCcchhhHHHHHHHHHHHhCCeEEeeCCCCCCHH---HHHHHHHH----cC-CCEEEEeee
Confidence 456888874111 333 35677788999999999999864333 33344433 22 247777864
No 360
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=27.54 E-value=2.5e+02 Score=22.78 Aligned_cols=31 Identities=19% Similarity=0.174 Sum_probs=24.9
Q ss_pred CCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 11 HPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 11 ~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
++|||.|..|+. .+.+.+...|+..||+|.-
T Consensus 3 M~~~ilivdd~~--~~~~~l~~~L~~~g~~v~~ 33 (230)
T 2oqr_A 3 MATSVLIVEDEE--SLADPLAFLLRKEGFEATV 33 (230)
T ss_dssp -CCEEEEECSCH--HHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEEeCCH--HHHHHHHHHHHHCCCEEEE
Confidence 357999999985 5678889999989999874
No 361
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=27.43 E-value=63 Score=24.52 Aligned_cols=30 Identities=10% Similarity=0.017 Sum_probs=22.5
Q ss_pred CcEEEEEeCcccHH--HHHHHHHHHHhCCCcE
Q 021654 12 PLKIIAGADSFGAE--LKDALVSHLRSLNIDV 41 (309)
Q Consensus 12 ~mki~i~~D~~g~~--lk~~l~~~l~~~g~ev 41 (309)
+|||.+.|-..--. +-+.+++.++++|+++
T Consensus 3 mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~ 34 (106)
T 1e2b_A 3 KKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPV 34 (106)
T ss_dssp CEEEEEECSSSTTTHHHHHHHHHHHHHSCCSE
T ss_pred CcEEEEECCCchhHHHHHHHHHHHHHHCCCCe
Confidence 35799988763221 6679999999999875
No 362
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=27.40 E-value=1.1e+02 Score=22.21 Aligned_cols=31 Identities=23% Similarity=0.330 Sum_probs=24.1
Q ss_pred CCCcEEEEEeCcccHHHHHHHHHHHHhCCC-cEE
Q 021654 10 PHPLKIIAGADSFGAELKDALVSHLRSLNI-DVE 42 (309)
Q Consensus 10 ~~~mki~i~~D~~g~~lk~~l~~~l~~~g~-ev~ 42 (309)
.+.|||.|..|+. ...+.++..|+..|| .|.
T Consensus 2 ~~~~~ilivdd~~--~~~~~l~~~l~~~~~~~v~ 33 (128)
T 1jbe_A 2 DKELKFLVVDDFS--TMRRIVRNLLKELGFNNVE 33 (128)
T ss_dssp CTTCCEEEECSCH--HHHHHHHHHHHHTTCCCEE
T ss_pred CCccEEEEECCCH--HHHHHHHHHHHHcCCcEEE
Confidence 4568999999885 466888889998898 454
No 363
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=27.32 E-value=35 Score=32.90 Aligned_cols=62 Identities=16% Similarity=0.190 Sum_probs=42.2
Q ss_pred CcccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCCceEEEEecCchhhhhhhc
Q 021654 20 DSFGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGVAIFAN 87 (309)
Q Consensus 20 D~~g~~lk~~l~~~l~~~g~ev~d~G~~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~~iaaN 87 (309)
+--|.++++.|.+.|+.+|..|. +-.-.-.-.+-.++..-.. ....-=+|.|||+|.++..|
T Consensus 168 ~~~g~dv~~~L~~al~r~~l~v~-v~al~NDtv~tlla~~y~~-----~~~~iglIlGTG~na~yve~ 229 (451)
T 1bdg_A 168 GVEGHNVAELLQTELDKRELNVK-CVAVVNDTVGTLASCALED-----PKCAVGLIVGTGTNVAYIED 229 (451)
T ss_dssp TCTTSBHHHHHHHHHHTTTCCEE-EEEEECHHHHHHHHHHTTC-----TTEEEEEEESSSEEEEEEEE
T ss_pred CCCCCcHHHHHHHHHHHcCCCcc-eEEEEEchHHHHHHhcccC-----CCcEEEEEEeCCcceEEEEc
Confidence 55578999999999998887642 1110112355556666553 34566678899999999987
No 364
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=27.15 E-value=1.1e+02 Score=22.74 Aligned_cols=32 Identities=3% Similarity=-0.195 Sum_probs=25.9
Q ss_pred CCcEEEEEeCcccHHHHHHHHHHHHh-CCCcEEEe
Q 021654 11 HPLKIIAGADSFGAELKDALVSHLRS-LNIDVEDL 44 (309)
Q Consensus 11 ~~mki~i~~D~~g~~lk~~l~~~l~~-~g~ev~d~ 44 (309)
+++||.|..|+. ...+.|+..|++ .||+|.-+
T Consensus 3 ~~~~ilivdd~~--~~~~~l~~~L~~~~~~~v~~~ 35 (140)
T 3lua_A 3 LDGTVLLIDYFE--YEREKTKIIFDNIGEYDFIEV 35 (140)
T ss_dssp CCCEEEEECSCH--HHHHHHHHHHHHHCCCEEEEE
T ss_pred CCCeEEEEeCCH--HHHHHHHHHHHhccCccEEEE
Confidence 357999999985 467888999998 99999843
No 365
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=26.96 E-value=63 Score=29.14 Aligned_cols=40 Identities=8% Similarity=-0.005 Sum_probs=28.1
Q ss_pred CCCCCcEEEEEeCcccHHHH--HHHHHHHHhCCCcEEEecCC
Q 021654 8 AAPHPLKIIAGADSFGAELK--DALVSHLRSLNIDVEDLGTS 47 (309)
Q Consensus 8 ~~~~~mki~i~~D~~g~~lk--~~l~~~l~~~g~ev~d~G~~ 47 (309)
....+|||++.+-..+=.+. -.|.+.|+++||+|.=++..
T Consensus 16 ~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~ 57 (412)
T 3otg_A 16 IEGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGE 57 (412)
T ss_dssp --CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECG
T ss_pred cccceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccH
Confidence 34567999988855443433 36788899999999977754
No 366
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=26.92 E-value=57 Score=30.60 Aligned_cols=34 Identities=9% Similarity=0.025 Sum_probs=25.3
Q ss_pred CCcEEEEEeCc----------------ccHH-HHHHHHHHHHhCCCcEEEe
Q 021654 11 HPLKIIAGADS----------------FGAE-LKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 11 ~~mki~i~~D~----------------~g~~-lk~~l~~~l~~~g~ev~d~ 44 (309)
++|||.+.+++ .|.+ .-..|.++|.+.||+|.=+
T Consensus 6 ~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~ 56 (499)
T 2r60_A 6 RIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDII 56 (499)
T ss_dssp -CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred ccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEE
Confidence 35999999985 5554 3357888899999998754
No 367
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=26.48 E-value=48 Score=30.10 Aligned_cols=37 Identities=14% Similarity=-0.035 Sum_probs=25.3
Q ss_pred CCCcEEEEEeCcccHHHH--HHHHHHHHhCCCcEEEecC
Q 021654 10 PHPLKIIAGADSFGAELK--DALVSHLRSLNIDVEDLGT 46 (309)
Q Consensus 10 ~~~mki~i~~D~~g~~lk--~~l~~~l~~~g~ev~d~G~ 46 (309)
.++|||++.+....=.+. -.|.+.|++.||||.=+..
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~ 56 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA 56 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc
Confidence 445999999875332221 3677889999999986554
No 368
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=26.45 E-value=40 Score=27.73 Aligned_cols=67 Identities=12% Similarity=0.080 Sum_probs=39.4
Q ss_pred EEEcCCCcCCCeecCCceEEEEEecEEEEEEee-CCe---EEEecCCcEEEECC---C---CeEEEEEcCCceEEEE
Q 021654 218 VRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLT-KGE---RFDLTVGDYLFTPA---G---DVHRVKYYEETEFFIK 284 (309)
Q Consensus 218 ~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~-~~~---~~~L~pGD~v~IP~---g---~~H~~~n~gd~~~~i~ 284 (309)
.++++|...-..-.+....++|++|.+.+.... +|+ ...+.|||++=..+ + ..+.+.+.+++.++..
T Consensus 35 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~~~~v~~i 111 (227)
T 3dkw_A 35 VNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAVVPSQLFRF 111 (227)
T ss_dssp EECCTTEEEECTTSBCCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEESCTTTTTTCSBCSSCEEESSCCEEEEE
T ss_pred EEECCCCEEEcCCCccceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHhcCCCCCCceEEEEcCcEEEEEE
Confidence 344555544332234456799999999984321 222 35678999764221 2 3456777777777544
No 369
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=26.41 E-value=79 Score=25.50 Aligned_cols=49 Identities=20% Similarity=0.316 Sum_probs=32.4
Q ss_pred cEEEEEeCcccHH--HHHHHHHHHHh-CCCcEEEecCCC-CcchhHHHHHHhhc
Q 021654 13 LKIIAGADSFGAE--LKDALVSHLRS-LNIDVEDLGTSD-YYSIGAEVGRRVSS 62 (309)
Q Consensus 13 mki~i~~D~~g~~--lk~~l~~~l~~-~g~ev~d~G~~~-y~~~a~~va~~v~~ 62 (309)
.+|+|.| |..+. +++.+...+-+ ..+..+|+-..+ ..++..++.+.+.+
T Consensus 2 igiii~s-Hg~~A~gl~~~~~~i~G~~~~i~av~~~~~~~~~~~~~~i~~~i~~ 54 (150)
T 3ipr_A 2 LGIVIAT-HGALSDGAKDAATVIMGATENIETVNLNSGDDVQALGGQIKTAIEN 54 (150)
T ss_dssp CEEEEEE-ETTHHHHHHHHHHHHHSCCCSEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred CEEEEEE-CcHHHHHHHHHHHHHcCCCCCEEEEEecCCCCHHHHHHHHHHHHHh
Confidence 3566665 55544 77777766654 367788887654 44577888777765
No 370
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=26.22 E-value=1.8e+02 Score=20.83 Aligned_cols=29 Identities=28% Similarity=0.247 Sum_probs=24.1
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 13 LKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 13 mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
.||.|.-|+. ...+.+...|+..||+|.-
T Consensus 3 ~~ilivdd~~--~~~~~l~~~L~~~g~~v~~ 31 (120)
T 3f6p_A 3 KKILVVDDEK--PIADILEFNLRKEGYEVHC 31 (120)
T ss_dssp CEEEEECSCH--HHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEEECCH--HHHHHHHHHHHhCCEEEEE
Confidence 5899999985 5678889999999999874
No 371
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=26.00 E-value=68 Score=23.79 Aligned_cols=34 Identities=15% Similarity=0.133 Sum_probs=26.4
Q ss_pred CCCcEEEEEeCcccHHHHHHHHHHHHhCC-CcEEEec
Q 021654 10 PHPLKIIAGADSFGAELKDALVSHLRSLN-IDVEDLG 45 (309)
Q Consensus 10 ~~~mki~i~~D~~g~~lk~~l~~~l~~~g-~ev~d~G 45 (309)
.+++||.|..|+. ...+.+++.|++.| |+|.-+.
T Consensus 12 ~~~~~ilivdd~~--~~~~~l~~~L~~~g~~~v~~~~ 46 (135)
T 3snk_A 12 TKRKQVALFSSDP--NFKRDVATRLDALAIYDVRVSE 46 (135)
T ss_dssp -CCEEEEEECSCH--HHHHHHHHHHHHTSSEEEEEEC
T ss_pred CCCcEEEEEcCCH--HHHHHHHHHHhhcCCeEEEEec
Confidence 3456899999985 56788999999999 9988443
No 372
>3sqn_A Conserved domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MGA family; 2.31A {Enterococcus faecalis}
Probab=25.98 E-value=26 Score=34.04 Aligned_cols=19 Identities=11% Similarity=-0.015 Sum_probs=16.0
Q ss_pred CCCceEEEEecCchhhhhh
Q 021654 67 DTTTRGLVACGTGVGVAIF 85 (309)
Q Consensus 67 ~~~~~gi~~CgtG~G~~ia 85 (309)
...-++|++|.+|+|.|..
T Consensus 396 ~~~~~~~vVC~~GigtS~l 414 (485)
T 3sqn_A 396 AQTMTAYFLFQGEPAWKAF 414 (485)
T ss_dssp CCSEEEEEECCSCHHHHHH
T ss_pred cccceEEEECCCchhHHHH
Confidence 4556899999999999875
No 373
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=25.97 E-value=45 Score=28.92 Aligned_cols=48 Identities=29% Similarity=0.369 Sum_probs=32.2
Q ss_pred HHhCC-CcEEEecCC------CCcchhHHHHHHhhcCCCCCCCceEEEEecCchhhhhhhcC
Q 021654 34 LRSLN-IDVEDLGTS------DYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGVAIFANK 88 (309)
Q Consensus 34 l~~~g-~ev~d~G~~------~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~~iaaNK 88 (309)
|...| -.|-=||.. .|.+.|.++++.+++ .--.+++|-|.|++=++||
T Consensus 32 l~~~~~~~VaV~Gss~~~~~~~~~~~A~~lg~~La~-------~g~~lVsGGg~GiM~aa~~ 86 (217)
T 1wek_A 32 LSELQVPLVSVFGSARFGEGHPAYEAGYRLGRALAE-------AGFGVVTGGGPGVMEAVNR 86 (217)
T ss_dssp HHHCCSCEEEEECCSSCCTTSHHHHHHHHHHHHHHH-------HTCEEEECSCSHHHHHHHH
T ss_pred HhhcCCCEEEEEeCCCCCCCcHHHHHHHHHHHHHHH-------CCCEEEeCChhhHHHHHHH
Confidence 44455 456667753 266788888888876 1245677888888888765
No 374
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=25.85 E-value=61 Score=28.61 Aligned_cols=35 Identities=26% Similarity=0.256 Sum_probs=25.0
Q ss_pred CcEEEEEeCcccHHHH--HHHHHHHHhCCCcEEEecC
Q 021654 12 PLKIIAGADSFGAELK--DALVSHLRSLNIDVEDLGT 46 (309)
Q Consensus 12 ~mki~i~~D~~g~~lk--~~l~~~l~~~g~ev~d~G~ 46 (309)
+|||.+.+...|=... ..|.+.|.++||+|.=++.
T Consensus 6 ~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~ 42 (364)
T 1f0k_A 6 GKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGT 42 (364)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEec
Confidence 4899988766543333 3788899999999986653
No 375
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=25.62 E-value=1.6e+02 Score=27.27 Aligned_cols=65 Identities=14% Similarity=0.036 Sum_probs=38.1
Q ss_pred EEcCCCcCCCeecCCceEEEEEecEEEEEEeeC-C-----eEEEecCCcEEEEC----CCCeEEEEEcCCceEEE
Q 021654 219 RFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTK-G-----ERFDLTVGDYLFTP----AGDVHRVKYYEETEFFI 283 (309)
Q Consensus 219 ~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~-~-----~~~~L~pGD~v~IP----~g~~H~~~n~gd~~~~i 283 (309)
.+++|..+-..-.+...+++|++|.+.+..... + ....+.|||++=-. ....+.+.+.+++.++.
T Consensus 69 ~~~~g~~i~~~Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe~~l~~~~~~~tv~A~~~~~l~~ 143 (469)
T 1o7f_A 69 NLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGESILDNTPRHATIVTRESSELLR 143 (469)
T ss_dssp EECTTCEEECTTSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECGGGGGTCBCSSEEEESSSEEEEE
T ss_pred EECCCCEEEeCCCCCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcchhhhCCCCccceEEEccceeEEE
Confidence 344444432222234567899999999964322 2 34688899977332 22344677777777653
No 376
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=25.31 E-value=61 Score=33.38 Aligned_cols=58 Identities=14% Similarity=0.139 Sum_probs=37.3
Q ss_pred CCcEEEEEe---CcccHH-HHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCCceEEEEecC
Q 021654 11 HPLKIIAGA---DSFGAE-LKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSDTTTRGLVACGT 78 (309)
Q Consensus 11 ~~mki~i~~---D~~g~~-lk~~l~~~l~~~g~ev~d~G~~~y~~~a~~va~~v~~~~~~~~~~~gi~~Cgt 78 (309)
++.||++++ | +.+ =|+.+...|+..||||+|+|.+--++ .+++++.+ .. -..|.+|++
T Consensus 595 ~r~kVvlatvg~D--~HdiG~~iVa~~l~~~GfeVi~lG~~v~~e---eiv~aA~e----~~-adiVglSsl 656 (727)
T 1req_A 595 RRPRILLAKMGQD--GHDRGQKVIATAYADLGFDVDVGPLFQTPE---ETARQAVE----AD-VHVVGVSSL 656 (727)
T ss_dssp SCCEEEEECBTTC--CCCHHHHHHHHHHHHHTCEEEECCTTBCHH---HHHHHHHH----TT-CSEEEEEEC
T ss_pred CCCEEEEEeCCcc--hhHHHHHHHHHHHHhCCeEEEeCCCCCCHH---HHHHHHHH----cC-CCEEEEeee
Confidence 456888874 5 333 35677778999999999999864333 33344433 22 247777774
No 377
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=25.26 E-value=1.2e+02 Score=21.09 Aligned_cols=30 Identities=17% Similarity=0.044 Sum_probs=24.3
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEEe
Q 021654 13 LKIIAGADSFGAELKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 13 mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~ 44 (309)
+||.|..|+. ...+.+.+.|+..||+|.-+
T Consensus 2 ~~iliv~~~~--~~~~~l~~~l~~~g~~v~~~ 31 (119)
T 2j48_A 2 GHILLLEEED--EAATVVCEMLTAAGFKVIWL 31 (119)
T ss_dssp CEEEEECCCH--HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEEeCCH--HHHHHHHHHHHhCCcEEEEe
Confidence 5888888884 56788999999999988753
No 378
>3mel_A Thiamin pyrophosphokinase family protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium; HET: TPP; 2.79A {Enterococcus faecalis}
Probab=25.18 E-value=1e+02 Score=26.56 Aligned_cols=62 Identities=10% Similarity=0.005 Sum_probs=43.1
Q ss_pred EEEEEeCcccHHHH-----------------HHHHHHHHhCCCcEEEecCC-CCcchhHHHHHHhhcCCCCCCCceEEEE
Q 021654 14 KIIAGADSFGAELK-----------------DALVSHLRSLNIDVEDLGTS-DYYSIGAEVGRRVSSSDSSDTTTRGLVA 75 (309)
Q Consensus 14 ki~i~~D~~g~~lk-----------------~~l~~~l~~~g~ev~d~G~~-~y~~~a~~va~~v~~~~~~~~~~~gi~~ 75 (309)
.+.||+|.+.-.|. ...+++++++|.+++-+=+. |+.|+-.++-.+... +....-+++
T Consensus 24 ~~~I~aDgGa~~l~~~g~~Pd~ivGDfDSi~~~~~~~~~~~~~~~~~~~~eKD~TD~e~Al~~~~~~----~~~~~I~i~ 99 (222)
T 3mel_A 24 DYFVGIDRGCLHLLEADLPLQLAVGDFDSLSREEYHFVQETTETLIQAPAEKDDTDTQLALQEALQR----FPQAEMTII 99 (222)
T ss_dssp SCEEEETTHHHHHHTTTCCCCEEEECCTTSCTTHHHHHHHHCSSEEECCSSCSSCHHHHHHHHHHHH----CTTSEEEEE
T ss_pred CEEEEEcHHHHHHHHCCCCCCEEEeCcccCCHHHHHHHHhcCCcEEECCccCCCCHHHHHHHHHHHh----CCCceEEEE
Confidence 36788888765544 36778888889888887654 688866666555555 444467788
Q ss_pred ecCc
Q 021654 76 CGTG 79 (309)
Q Consensus 76 CgtG 79 (309)
+++|
T Consensus 100 Ga~G 103 (222)
T 3mel_A 100 GATG 103 (222)
T ss_dssp CCCS
T ss_pred ccCC
Confidence 8887
No 379
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=25.11 E-value=58 Score=29.49 Aligned_cols=38 Identities=16% Similarity=0.033 Sum_probs=24.3
Q ss_pred CCCCCcEEEEEeCcccHHHH--HHHHHHHHhCCCcEEEec
Q 021654 8 AAPHPLKIIAGADSFGAELK--DALVSHLRSLNIDVEDLG 45 (309)
Q Consensus 8 ~~~~~mki~i~~D~~g~~lk--~~l~~~l~~~g~ev~d~G 45 (309)
....+|||.+.+....=.+. -.|.+.|++.||+|.=+.
T Consensus 11 ~~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~ 50 (398)
T 4fzr_A 11 PRGSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAA 50 (398)
T ss_dssp ----CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEE
T ss_pred CCCCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEc
Confidence 44566999998765433322 367888999999998554
No 380
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=25.10 E-value=2.9e+02 Score=23.89 Aligned_cols=81 Identities=10% Similarity=0.033 Sum_probs=45.2
Q ss_pred CcEEEEEeC------cccHHHHHHHHHHHHhCCCcEEEecCCCC-cchhHHHHHHhhcCCCCCCCceEEEEecCchhhh-
Q 021654 12 PLKIIAGAD------SFGAELKDALVSHLRSLNIDVEDLGTSDY-YSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGVA- 83 (309)
Q Consensus 12 ~mki~i~~D------~~g~~lk~~l~~~l~~~g~ev~d~G~~~y-~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~~- 83 (309)
..+|++..+ ..-..+-+.+.+.+++.||+++-+-+.+. .+.. ..-+.+.+ ..+ -||++++.+..-.
T Consensus 5 ~~~Ig~v~~~~~~d~~f~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~-~~l~~l~~----~~v-dgIi~~~~~~~~~~ 78 (296)
T 2hqb_A 5 GGMVGLLVEDTIDDQGWNRKAYEGLLNIHSNLDVDVVLEEGVNSEQKAH-RRIKELVD----GGV-NLIFGHGHAFAEYF 78 (296)
T ss_dssp -CEEEEECCCC----CCTHHHHHHHHHHHHHSCCEEEEECCCCSHHHHH-HHHHHHHH----TTC-CEEEECSTHHHHHH
T ss_pred CcEEEEEECCCCCCCcHHHHHHHHHHHHHHHhCCeEEEEeCCCCHHHHH-HHHHHHHH----CCC-CEEEEcCHhHHHHH
Confidence 356766543 23334778889999999999875543322 2232 33333443 333 4788887654322
Q ss_pred -hhhcCCCceEEEEeC
Q 021654 84 -IFANKNPGVFATTCL 98 (309)
Q Consensus 84 -iaaNK~~giraa~~~ 98 (309)
-++.++|+|.-.++.
T Consensus 79 ~~~~~~~p~~p~v~id 94 (296)
T 2hqb_A 79 STIHNQYPDVHFVSFN 94 (296)
T ss_dssp HTTTTSCTTSEEEEES
T ss_pred HHHHHHCCCCEEEEEe
Confidence 234556666655553
No 381
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=25.01 E-value=68 Score=31.23 Aligned_cols=58 Identities=22% Similarity=0.201 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHhCC--------CcEEEecCCC----CcchhHHHHHHhhcCCCCCCCceEEEEecCchhhhhhhcC
Q 021654 24 AELKDALVSHLRSLN--------IDVEDLGTSD----YYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGVAIFANK 88 (309)
Q Consensus 24 ~~lk~~l~~~l~~~g--------~ev~d~G~~~----y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~~iaaNK 88 (309)
..+.+.|...|++.+ --|+=+|... |++.|.++++.++. . --.|+||.|-|++-+||+
T Consensus 123 ~~It~~v~~~lrna~~f~p~~~~~ivVv~GSs~~~~~~Ye~A~eLGr~LA~----~---G~~LVtGGG~GlMEaa~a 192 (460)
T 3bq9_A 123 ATLTHVVFDILRNARTLRPQEEPNMVVCWGGHSINEIEYKYTKDVGYHIGL----R---GLNICTGCGPGAMKGPMK 192 (460)
T ss_dssp HHHHHHHHHHHHHTTCCCTTCCSCEEEEECCSSCCHHHHHHHHHHHHHHHH----T---TCEEEECCSSGGGTHHHH
T ss_pred HHHHHHHHHhhhccccccCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHHHH----C---CCEEEeCCcHHHhhHHHh
Confidence 357788888887632 2345567642 55899999999986 1 234566666688856654
No 382
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=25.01 E-value=3.3e+02 Score=23.57 Aligned_cols=54 Identities=15% Similarity=0.023 Sum_probs=32.9
Q ss_pred CCCCcEEEEEeCcc---cH--HHHHHHHHHHHhCCCcEE--EecCCC-------CcchhHHHHHHhhc
Q 021654 9 APHPLKIIAGADSF---GA--ELKDALVSHLRSLNIDVE--DLGTSD-------YYSIGAEVGRRVSS 62 (309)
Q Consensus 9 ~~~~mki~i~~D~~---g~--~lk~~l~~~l~~~g~ev~--d~G~~~-------y~~~a~~va~~v~~ 62 (309)
...+|||++.+-+. |. .|-+.+.+.|++.|++|. |+.... .++-...+.++|.+
T Consensus 31 ~~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL~~~pl~~~d~~~~d~~~~l~~~i~~ 98 (247)
T 2q62_A 31 STHRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDPSGLPLPDAAPVSHPKVQELRELSIW 98 (247)
T ss_dssp CCSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCCTTCCCTTSSCTTSHHHHHHHHHHHH
T ss_pred cCCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEhhcCCCCcCCCCCCHHHHHHHHHHHH
Confidence 34568887776663 44 366788888888887654 554321 12224556666665
No 383
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=24.88 E-value=1.1e+02 Score=21.64 Aligned_cols=29 Identities=14% Similarity=0.172 Sum_probs=23.6
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 13 LKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 13 mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
|||.|..|+. ...+.+++.|+..||+|.-
T Consensus 2 ~~ilivdd~~--~~~~~l~~~l~~~~~~v~~ 30 (121)
T 1zh2_A 2 TNVLIVEDEQ--AIRRFLRTALEGDGMRVFE 30 (121)
T ss_dssp CEEEEECSCH--HHHHHHHHHHHTTTCEEEE
T ss_pred cEEEEEeCCH--HHHHHHHHHHhcCCCEEEE
Confidence 6899988885 4667888999989998864
No 384
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=24.43 E-value=90 Score=28.67 Aligned_cols=88 Identities=14% Similarity=0.102 Sum_probs=0.0
Q ss_pred EEcCCCcCCCeecCCceEEEEEecEEEEEEeeCCe-----EEEecCCcEE-----EECCCCeEEEEEcCCceEEEEEcCc
Q 021654 219 RFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGE-----RFDLTVGDYL-----FTPAGDVHRVKYYEETEFFIKWDGR 288 (309)
Q Consensus 219 ~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~-----~~~L~pGD~v-----~IP~g~~H~~~n~gd~~~~i~~~~~ 288 (309)
.+.+|..+-.--.+...+++|++|.+.+.....+. ...+.+||++ +-..-....+.+.+++.++.+-...
T Consensus 275 ~~~~ge~I~~eGd~~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~fGe~all~~~~r~~tv~A~~~~~ll~i~~~~ 354 (381)
T 4din_B 275 QFEDGEKIVVQGEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYFGEIALLLNRPRAATVVARGPLKCVKLDRPR 354 (381)
T ss_dssp CBCSSCBSSCTTSBCCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEECTTGGGSCCBCSSEEEESSCBEEEEEEHHH
T ss_pred cCCCCCEEEeCCCcCCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEechHHHhCCCCceeEEEEcCCEEEEEEeHHH
Q ss_pred cccccchhHHHHHHHHhh
Q 021654 289 WDMFFDEDLEAAKKAVEK 306 (309)
Q Consensus 289 ~~i~~~e~~~~~~~~~~~ 306 (309)
+.-.+.+.....++.++.
T Consensus 355 f~~ll~~~~~i~~~~~~~ 372 (381)
T 4din_B 355 FERVLGPCSEILKRNIQR 372 (381)
T ss_dssp HHHHHCCHHHHHHTTHHH
T ss_pred HHHHHhhhHHHHHHHHHH
No 385
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=24.27 E-value=78 Score=26.27 Aligned_cols=49 Identities=12% Similarity=0.196 Sum_probs=34.2
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhc
Q 021654 13 LKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSS 62 (309)
Q Consensus 13 mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~G~~~y~~~a~~va~~v~~ 62 (309)
||+.++.|....+-.-.+.+.|. .|.+++..|..-+..++..+.+.+++
T Consensus 1 m~li~a~D~~~~~~~~~~~~~~~-~~~diie~G~p~~~~~g~~~i~~ir~ 49 (211)
T 3f4w_A 1 MKLQLALDELTLPEAMVFMDKVV-DDVDIIEVGTPFLIREGVNAIKAIKE 49 (211)
T ss_dssp CEEEEEECSCCHHHHHHHHHHHG-GGCSEEEECHHHHHHHTTHHHHHHHH
T ss_pred CcEEEEeCCCCHHHHHHHHHHhh-cCccEEEeCcHHHHhccHHHHHHHHH
Confidence 89999999987776556666675 48899998961113455566666654
No 386
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=24.19 E-value=1.1e+02 Score=23.17 Aligned_cols=31 Identities=16% Similarity=0.190 Sum_probs=24.3
Q ss_pred CCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 11 HPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 11 ~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
.+|||.|..|+. ...+.+...|+..||+|.-
T Consensus 2 ~~~~ILivdd~~--~~~~~l~~~L~~~g~~v~~ 32 (155)
T 1qkk_A 2 AAPSVFLIDDDR--DLRKAMQQTLELAGFTVSS 32 (155)
T ss_dssp --CEEEEECSCH--HHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEEeCCH--HHHHHHHHHHHHcCcEEEE
Confidence 357899999885 5668889999999999874
No 387
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=24.10 E-value=96 Score=25.01 Aligned_cols=32 Identities=19% Similarity=0.305 Sum_probs=25.5
Q ss_pred CCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEE
Q 021654 9 APHPLKIIAGADSFGAELKDALVSHLRSLNIDVE 42 (309)
Q Consensus 9 ~~~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~ 42 (309)
..+++||.|..|+. ...+.+...|+..||+|+
T Consensus 10 ~~m~~~iLivdd~~--~~~~~l~~~L~~~g~~v~ 41 (205)
T 1s8n_A 10 AAVPRRVLIAEDEA--LIRMDLAEMLREEGYEIV 41 (205)
T ss_dssp -CCCCEEEEECSSH--HHHHHHHHHHHHTTCEEE
T ss_pred cCCCccEEEEECCH--HHHHHHHHHHHHCCCEEE
Confidence 34457899999985 566888899998999987
No 388
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=24.08 E-value=97 Score=22.82 Aligned_cols=30 Identities=20% Similarity=0.109 Sum_probs=24.1
Q ss_pred CcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 12 PLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 12 ~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
++||.|..|+. ...+.++..|+..||+|.-
T Consensus 3 ~~~Ilivdd~~--~~~~~l~~~L~~~g~~v~~ 32 (132)
T 3crn_A 3 LKRILIVDDDT--AILDSTKQILEFEGYEVEI 32 (132)
T ss_dssp CCEEEEECSCH--HHHHHHHHHHHHTTCEEEE
T ss_pred ccEEEEEeCCH--HHHHHHHHHHHHCCceEEE
Confidence 46899998885 4667888899989998873
No 389
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=23.92 E-value=2.2e+02 Score=23.01 Aligned_cols=29 Identities=7% Similarity=0.054 Sum_probs=24.3
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 13 LKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 13 mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
|||.|..|+. .+.+.+...|+..||+|.-
T Consensus 1 m~ilivdd~~--~~~~~l~~~L~~~g~~v~~ 29 (223)
T 2hqr_A 1 MRVLLIEKNS--VLGGEIEKGLNVKGFMADV 29 (223)
T ss_dssp CCEEEECSCH--HHHHHHHHHHGGGTCCEEE
T ss_pred CEEEEEcCCH--HHHHHHHHHHHHCCcEEEE
Confidence 6899999985 5678899999999999874
No 390
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=23.88 E-value=2.2e+02 Score=20.95 Aligned_cols=30 Identities=20% Similarity=0.255 Sum_probs=24.5
Q ss_pred CcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 12 PLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 12 ~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
+++|.|.-|+. ...+.+...|++.||+|.-
T Consensus 4 ~~~iLivdd~~--~~~~~l~~~L~~~g~~v~~ 33 (136)
T 3t6k_A 4 PHTLLIVDDDD--TVAEMLELVLRGAGYEVRR 33 (136)
T ss_dssp CCEEEEECSCH--HHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEeCCH--HHHHHHHHHHHHCCCEEEE
Confidence 46899998885 4678899999999999874
No 391
>1p99_A Hypothetical protein PG110; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.70A {Staphylococcus aureus subsp} SCOP: c.94.1.1
Probab=23.80 E-value=2.2e+02 Score=25.41 Aligned_cols=53 Identities=15% Similarity=0.116 Sum_probs=33.8
Q ss_pred CCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCCceEE
Q 021654 11 HPLKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSDTTTRGL 73 (309)
Q Consensus 11 ~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~G~~~y~~~a~~va~~v~~~~~~~~~~~gi 73 (309)
+..||..-..|+ ++-+.++++|+++|++|.=.-..+|++. -+++.+ |+.|.+.
T Consensus 39 ~~i~IG~~~~~~--~~~~~~~~~~~~~G~~Ve~~~f~~~~~~----~~AL~~----G~iD~~~ 91 (295)
T 1p99_A 39 KKVTIGVASNDT--KAWEKVKELAKKDDIDVEIKHFSDYNLP----NKALND----GDIDMNA 91 (295)
T ss_dssp -CEEEEESSSCC--HHHHHHHHHHGGGTCCEEEEECSSTTSH----HHHHHT----TSSSEEE
T ss_pred CeEEEEEeCCcH--HHHHHHHHHHHHcCCeEEEEEeCChHHH----HHHHHc----CCCCEEc
Confidence 346666554443 4456678899999998864433456554 345666 8899865
No 392
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=23.37 E-value=1.2e+02 Score=22.54 Aligned_cols=32 Identities=28% Similarity=0.344 Sum_probs=26.4
Q ss_pred EEEEEeCcccHHHHHHHHHHHHhCCCcEEEe-cC
Q 021654 14 KIIAGADSFGAELKDALVSHLRSLNIDVEDL-GT 46 (309)
Q Consensus 14 ki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~-G~ 46 (309)
-|+|++| +.-+.+..|..+-+..+..++.+ ++
T Consensus 34 lViiA~D-~~~~~~~~i~~~c~~~~ip~~~~~~s 66 (99)
T 3j21_Z 34 LIIVAKN-APKEIKDDIYYYAKLSDIPVYEFEGT 66 (99)
T ss_dssp EEEEECC-CCHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred EEEEeCC-CCHHHHHHHHHHHHHcCCCEEEeCCC
Confidence 3888888 77889999999989999998766 54
No 393
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=23.26 E-value=2.2e+02 Score=20.79 Aligned_cols=32 Identities=13% Similarity=0.025 Sum_probs=25.2
Q ss_pred CCCcEEEEEeCcccHHHHHHHHHHHHhCCC--cEEE
Q 021654 10 PHPLKIIAGADSFGAELKDALVSHLRSLNI--DVED 43 (309)
Q Consensus 10 ~~~mki~i~~D~~g~~lk~~l~~~l~~~g~--ev~d 43 (309)
.+++||.|..|+. ...+.+++.|+..|+ +|.-
T Consensus 4 ~~~~~iLivdd~~--~~~~~l~~~L~~~g~~~~v~~ 37 (149)
T 1k66_A 4 NATQPLLVVEDSD--EDFSTFQRLLQREGVVNPIYR 37 (149)
T ss_dssp CTTSCEEEECCCH--HHHHHHHHHHHHTTBCSCEEE
T ss_pred CCCccEEEEECCH--HHHHHHHHHHHHcCCCceEEE
Confidence 4567899998885 567889999999998 6654
No 394
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=23.20 E-value=2.2e+02 Score=20.82 Aligned_cols=30 Identities=17% Similarity=0.014 Sum_probs=24.7
Q ss_pred CcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 12 PLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 12 ~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
++||.|..|+. ...+.+...|+..||+|.-
T Consensus 3 ~~~ilivdd~~--~~~~~l~~~l~~~g~~v~~ 32 (143)
T 3jte_A 3 LAKILVIDDES--TILQNIKFLLEIDGNEVLT 32 (143)
T ss_dssp CCEEEEECSCH--HHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEcCCH--HHHHHHHHHHHhCCceEEE
Confidence 46899998885 5678899999999998874
No 395
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=23.01 E-value=87 Score=25.30 Aligned_cols=24 Identities=4% Similarity=-0.117 Sum_probs=20.6
Q ss_pred eEEEecCCcEEEECCCCeEEEEEc
Q 021654 253 ERFDLTVGDYLFTPAGDVHRVKYY 276 (309)
Q Consensus 253 ~~~~L~pGD~v~IP~g~~H~~~n~ 276 (309)
....|.||+++.+-|+.+|+....
T Consensus 112 ~~v~l~~G~FaiFfP~d~H~p~~~ 135 (155)
T 1s4c_A 112 FTVTMKPKMFAVFYPYEPHKPCCV 135 (155)
T ss_dssp EEEEECTTEEEEECTTCCEEEEEC
T ss_pred EEEEeCCCEEEEECCCcccccccc
Confidence 456889999999999999998664
No 396
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=22.91 E-value=1.3e+02 Score=25.96 Aligned_cols=38 Identities=21% Similarity=0.179 Sum_probs=27.3
Q ss_pred CcEEEEEeCccc----HHHH--HHHHHHHHhCCCcEEEecCCCC
Q 021654 12 PLKIIAGADSFG----AELK--DALVSHLRSLNIDVEDLGTSDY 49 (309)
Q Consensus 12 ~mki~i~~D~~g----~~lk--~~l~~~l~~~g~ev~d~G~~~y 49 (309)
+|||+|-.+... +.|+ ..+.+.|++.||+|+=+...+.
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~~~ 45 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEV 45 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTS
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecCch
Confidence 578888876432 2232 6788999999999988776654
No 397
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=22.72 E-value=1.1e+02 Score=26.21 Aligned_cols=51 Identities=12% Similarity=0.074 Sum_probs=35.8
Q ss_pred CCcEEEEEeCccc-HHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhc
Q 021654 11 HPLKIIAGADSFG-AELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSS 62 (309)
Q Consensus 11 ~~mki~i~~D~~g-~~lk~~l~~~l~~~g~ev~d~G~~~y~~~a~~va~~v~~ 62 (309)
++|||.+.+-... .++. ...+.+++.||+-+.+....|......+.+.+.+
T Consensus 24 m~mklg~~~~~~~~~~~~-~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~ 75 (287)
T 3kws_A 24 LELKLSFQEGIAPGESLN-EKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNG 75 (287)
T ss_dssp CCCEEEEETTSSCCSSHH-HHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTT
T ss_pred ceeeEEEEecccCCCCHH-HHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHH
Confidence 3578888764433 3454 4566678899999999887776666777776654
No 398
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=22.68 E-value=50 Score=27.44 Aligned_cols=49 Identities=22% Similarity=0.265 Sum_probs=32.5
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhc
Q 021654 13 LKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSS 62 (309)
Q Consensus 13 mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~G~~~y~~~a~~va~~v~~ 62 (309)
||+.++.|....+--..+.+.|.. |.+++++|..-|..++..+.+.+.+
T Consensus 1 ~~li~a~d~~~~~~~~~~~~~~~~-~v~~iev~~~~~~~~g~~~i~~l~~ 49 (207)
T 3ajx_A 1 MKLQVAIDLLSTEAALELAGKVAE-YVDIIELGTPLIKAEGLSVITAVKK 49 (207)
T ss_dssp CEEEEEECCSCHHHHHHHHHHHGG-GCSEEEECHHHHHHHCTHHHHHHHH
T ss_pred CeEEEEeCCCCHHHHHHHHHHhhc-cCCEEEECcHHHHhhCHHHHHHHHH
Confidence 789999998766554555666666 7788888764334455555555554
No 399
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=22.65 E-value=1.4e+02 Score=21.70 Aligned_cols=30 Identities=17% Similarity=0.068 Sum_probs=24.4
Q ss_pred CcEEEEEeCcccHHHHHHHHHHHHhCCC--cEEE
Q 021654 12 PLKIIAGADSFGAELKDALVSHLRSLNI--DVED 43 (309)
Q Consensus 12 ~mki~i~~D~~g~~lk~~l~~~l~~~g~--ev~d 43 (309)
+|||.|..|+. ...+.+.+.|+..|+ +|.-
T Consensus 2 ~~~ilivdd~~--~~~~~l~~~L~~~~~~~~v~~ 33 (140)
T 1k68_A 2 HKKIFLVEDNK--ADIRLIQEALANSTVPHEVVT 33 (140)
T ss_dssp CCEEEEECCCH--HHHHHHHHHHHTCSSCCEEEE
T ss_pred CCeEEEEeCCH--HHHHHHHHHHHhcCCCceEEE
Confidence 57899999985 567889999999998 6653
No 400
>3lm8_A Thiamine pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: VIB; 2.60A {Bacillus subtilis}
Probab=22.41 E-value=1.7e+02 Score=25.13 Aligned_cols=61 Identities=10% Similarity=0.022 Sum_probs=44.9
Q ss_pred EEEEEeCcccHHHH-----------------HHHHHHHHhCCCcEEEecC-CCCcchhHHHHHHhhcCCCCCCCceEEEE
Q 021654 14 KIIAGADSFGAELK-----------------DALVSHLRSLNIDVEDLGT-SDYYSIGAEVGRRVSSSDSSDTTTRGLVA 75 (309)
Q Consensus 14 ki~i~~D~~g~~lk-----------------~~l~~~l~~~g~ev~d~G~-~~y~~~a~~va~~v~~~~~~~~~~~gi~~ 75 (309)
.+.||+|.+...|. +..+++++++|.+++-+=+ .|+.|+-.++-.+... ..+.-+++
T Consensus 26 ~~~i~~DgGa~~l~~~g~~Pd~ivGDfDSi~~~~~~~~~~~~~~i~~~p~eKD~TD~e~Al~~a~~~-----g~~~I~i~ 100 (222)
T 3lm8_A 26 TLWIGVDKGTVTLLDAGIIPVEAFGDFDSITEQERRRIEKAAPALHVYQAEKDQTDLDLALDWALEK-----QPDIIQIF 100 (222)
T ss_dssp EEEEEETHHHHHHHHHTCCCSEEESCSTTSCHHHHHHHHHHCTTCEEECCCSSSCHHHHHHHHHHHH-----CCSEEEEE
T ss_pred CEEEEECHHHHHHHHcCCCCcEEEeCcccCCHHHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHHc-----CCCEEEEE
Confidence 58899998876654 4677888888988988864 4788876666655554 34677777
Q ss_pred ecCc
Q 021654 76 CGTG 79 (309)
Q Consensus 76 CgtG 79 (309)
+++|
T Consensus 101 Ga~G 104 (222)
T 3lm8_A 101 GITG 104 (222)
T ss_dssp SCCC
T ss_pred cCCC
Confidence 7777
No 401
>1yua_A Topoisomerase I; gene-regulating protein, DNA binding protein; NMR {Escherichia coli} SCOP: g.41.3.3 g.41.3.3
Probab=22.41 E-value=29 Score=27.38 Aligned_cols=25 Identities=24% Similarity=0.199 Sum_probs=18.6
Q ss_pred CceEEEEecCchhhhhhhcCCCceEE
Q 021654 69 TTRGLVACGTGVGVAIFANKNPGVFA 94 (309)
Q Consensus 69 ~~~gi~~CgtG~G~~iaaNK~~gira 94 (309)
.+.=||=.|.- |+.+|||+||-.|=
T Consensus 24 d~~fVLRDGAs-GlFlAAs~FPK~RE 48 (122)
T 1yua_A 24 DAYFVLRDGAA-GVFLAANTFPKSRE 48 (122)
T ss_dssp SCEEEEECCSS-SCEEEETTTTSCCC
T ss_pred CCEEEeeCCch-hhhhhhccCCcccc
Confidence 34556666654 99999999998874
No 402
>2dgd_A 223AA long hypothetical arylmalonate decarboxylas; octamer, alpha/beta structure, lyase; 2.90A {Sulfolobus tokodaii}
Probab=22.32 E-value=1.3e+02 Score=25.27 Aligned_cols=35 Identities=14% Similarity=0.114 Sum_probs=27.2
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecCCC
Q 021654 13 LKIIAGADSFGAELKDALVSHLRSLNIDVEDLGTSD 48 (309)
Q Consensus 13 mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~G~~~ 48 (309)
-||.|-+ -..-.+-+..+++|++.|++|+.....+
T Consensus 109 ~rvgvlt-~~~~~~~~~~~~~l~~~G~~v~~~~~~~ 143 (223)
T 2dgd_A 109 RKLWIGT-PYIKERTLEEVEWWRNKGFEIVGYDGLG 143 (223)
T ss_dssp CEEEEEE-SSCHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred CeEEEEe-CCchHHHHHHHHHHHhCCcEEecccCCC
Confidence 3899998 5556667789999999999998765443
No 403
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=22.29 E-value=2.5e+02 Score=22.06 Aligned_cols=31 Identities=13% Similarity=0.084 Sum_probs=24.8
Q ss_pred CCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 11 HPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 11 ~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
+++||.|.-|+. ...+.+...|+..||+|.-
T Consensus 6 ~~~~iLivdd~~--~~~~~l~~~L~~~g~~v~~ 36 (184)
T 3rqi_A 6 SDKNFLVIDDNE--VFAGTLARGLERRGYAVRQ 36 (184)
T ss_dssp -CCEEEEECSCH--HHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEEcCCH--HHHHHHHHHHHHCCCEEEE
Confidence 346899999985 5678899999999998853
No 404
>3egl_A DEGV family protein; alpha-beta-alpha sandwich, methylated lysines, structural GE PSI-2, protein structure initiative; HET: MLY MSE PLM; 2.41A {Corynebacterium glutamicum}
Probab=22.25 E-value=72 Score=28.55 Aligned_cols=101 Identities=15% Similarity=0.079 Sum_probs=61.9
Q ss_pred CCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEecC----C----C---CcchhHHHHHHhhcCCCCCCCceEEEEecCc
Q 021654 11 HPLKIIAGADSFGAELKDALVSHLRSLNIDVEDLGT----S----D---YYSIGAEVGRRVSSSDSSDTTTRGLVACGTG 79 (309)
Q Consensus 11 ~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~G~----~----~---y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG 79 (309)
+.|||+|-+|.+. +|-+. .+++.|+.|+-+-. . + ..+|....-+.+.+ +.++..|.||=|.
T Consensus 2 ~~Mki~IvtDSt~-dL~~e---~~~~~~I~vvPL~v~~~~~~p~TSqps~~~~~~~f~~~~~~----~~~d~Ii~I~iSs 73 (277)
T 3egl_A 2 NAMPVRVIVDSSA-CLPTH---VAEDLDITVINLHVMNNGEERSTSGLSSLELAASYARQLER----GGDDGVLALHISX 73 (277)
T ss_dssp -CCCCEEEEEGGG-CCCHH---HHHHTTEEEECCEEEECSSCEEEECCCHHHHHHHHHHHHHH----TTTSCEEEECSCT
T ss_pred CCCcEEEEEECCC-CCCHH---HHHHCCeEEEEEEEEECCcccccCCcCHHHHHHHHHHHHHh----CCCCcEEEEEeCc
Confidence 4589999999976 44433 44567888875532 1 1 22343334445554 5566677777544
Q ss_pred hhhhhhhcCCCceEEEEeCCHHHHHHhHhhc-CceEeEeccccCCHHHHHHHHHHH
Q 021654 80 VGVAIFANKNPGVFATTCLTPADALNTRSIN-NCNVLAVSGMSTSKESAVEILDTW 134 (309)
Q Consensus 80 ~G~~iaaNK~~giraa~~~~~~~A~~~r~hN-~aNvl~lg~~~~~~~~a~~i~~~~ 134 (309)
| +.-+-++|.++++.- +.||-.+=.+.++..+..-.+++-
T Consensus 74 -~--------------LSGTy~sA~~aa~~~~~~~I~ViDS~~~s~g~g~~v~~Aa 114 (277)
T 3egl_A 74 -E--------------LSSTWSAAVTAAAVFDDDSVRVVDTSSLGMAVGAAAMAAA 114 (277)
T ss_dssp -T--------------TCSHHHHHHHHHTTSSTTSEEEECCSCCTHHHHHHHHHHH
T ss_pred -c--------------hhhhhHHHHHHHHhCCCCCEEEECCCchhHHHHHHHHHHH
Confidence 1 223456777777654 668999999988777665554443
No 405
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A*
Probab=22.08 E-value=1.6e+02 Score=29.13 Aligned_cols=45 Identities=13% Similarity=0.131 Sum_probs=33.4
Q ss_pred EEEEEeCc--ccHHHHHHHHHHHHhCCCcEE---EecCCCCcchhHHHHH
Q 021654 14 KIIAGADS--FGAELKDALVSHLRSLNIDVE---DLGTSDYYSIGAEVGR 58 (309)
Q Consensus 14 ki~i~~D~--~g~~lk~~l~~~l~~~g~ev~---d~G~~~y~~~a~~va~ 58 (309)
+|+||.|. .+-.+.+...+-|.+.|.+|+ |+|.-.-|-++..+-.
T Consensus 104 ~VvVG~D~R~~S~~~~~~a~~~L~a~Gi~V~~~~d~g~~PTP~vsfav~~ 153 (570)
T 3na5_A 104 PCYVGKDTHALSEPAFISVLEVLAANGVDVIVQENNGFTPTPAVSNAILV 153 (570)
T ss_dssp CEEEEECSSTTHHHHHHHHHHHHHHTTCCEEEEGGGCCCCHHHHHHHHHH
T ss_pred eEEEEeCCCcccHHHHHHHHHHHHHCCCEEEEeCCCCccChHHHHHHHHH
Confidence 69999996 455566777789999999999 5677665655555533
No 406
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=22.03 E-value=59 Score=29.33 Aligned_cols=59 Identities=15% Similarity=0.185 Sum_probs=36.3
Q ss_pred ccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCCceEEEEecCchhhhhhhcC
Q 021654 22 FGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGVAIFANK 88 (309)
Q Consensus 22 ~g~~lk~~l~~~l~~~g~ev~d~G~~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~~iaaNK 88 (309)
.+++|++.|.+.+. ...-|+| .--+..+++..... ..+..++..+..|||+|..+..|.
T Consensus 108 ~~~~l~~~l~~~~~-~pV~v~N------Da~aaalgE~~~g~-~~~~~~~~~l~~GtGiG~gii~~G 166 (327)
T 4db3_A 108 KGKPLRADLEAKIG-RSVKIEN------DANCFALSEAWDEE-LQDAPSVMGLILGTGFGGGLIYEG 166 (327)
T ss_dssp TTSCHHHHHHHHHS-SCCEEEE------HHHHHHHHHHTSTT-TTTCSEEEEEEESSSEEEEEEETT
T ss_pred cCCCHHHHHHHHHC-CCEEEec------chhHHHHHHHHhCC-CCCCCcEEEEEeCccceEEEEECC
Confidence 34678888888772 1222222 12345566654320 113456788899999999999885
No 407
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=21.93 E-value=1.5e+02 Score=21.54 Aligned_cols=30 Identities=23% Similarity=0.153 Sum_probs=24.1
Q ss_pred CcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 12 PLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 12 ~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
.+||.|..|+. ...+.+...|+..||+|.-
T Consensus 3 ~~~ilivdd~~--~~~~~l~~~L~~~g~~v~~ 32 (136)
T 1mvo_A 3 NKKILVVDDEE--SIVTLLQYNLERSGYDVIT 32 (136)
T ss_dssp CCEEEEECSCH--HHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEECCH--HHHHHHHHHHHHCCcEEEE
Confidence 45899999985 4667888899989998764
No 408
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=21.80 E-value=72 Score=28.65 Aligned_cols=35 Identities=11% Similarity=0.096 Sum_probs=24.7
Q ss_pred CcEEEEEeCcccHHHH--HHHHHHHHhCCCcEEEecC
Q 021654 12 PLKIIAGADSFGAELK--DALVSHLRSLNIDVEDLGT 46 (309)
Q Consensus 12 ~mki~i~~D~~g~~lk--~~l~~~l~~~g~ev~d~G~ 46 (309)
+|||.+.+....=.+. -.|.+.|++.||+|.=++.
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~ 37 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAP 37 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEEC
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecC
Confidence 4899888865443332 2477889999999986653
No 409
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=21.69 E-value=1.5e+02 Score=21.06 Aligned_cols=29 Identities=17% Similarity=0.358 Sum_probs=23.5
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 13 LKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 13 mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
|||.|..|+. ...+.+.+.|+..||+|.-
T Consensus 1 ~~ilivdd~~--~~~~~l~~~l~~~g~~v~~ 29 (121)
T 2pl1_A 1 MRVLVVEDNA--LLRHHLKVQIQDAGHQVDD 29 (121)
T ss_dssp CEEEEECSCH--HHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEEeCcH--HHHHHHHHHHhhcCCEEEE
Confidence 6888988885 5677888999999998763
No 410
>3k94_A Thiamin pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.10A {Geobacillus thermodenitrificans}
Probab=21.67 E-value=1.8e+02 Score=25.14 Aligned_cols=61 Identities=18% Similarity=0.059 Sum_probs=44.6
Q ss_pred EEEEEeCcccHHHH-----------------HHHHHHHHhCCCcEEEecC-CCCcchhHHHHHHhhcCCCCCCCceEEEE
Q 021654 14 KIIAGADSFGAELK-----------------DALVSHLRSLNIDVEDLGT-SDYYSIGAEVGRRVSSSDSSDTTTRGLVA 75 (309)
Q Consensus 14 ki~i~~D~~g~~lk-----------------~~l~~~l~~~g~ev~d~G~-~~y~~~a~~va~~v~~~~~~~~~~~gi~~ 75 (309)
.+.||+|.+...|. +..+++++++|.+++-+=+ .|+.|+-.++-.++.. ..+.-+++
T Consensus 25 ~~~i~~Dgga~~l~~~g~~Pd~ivGD~DSi~~~~~~~~~~~~~~i~~~p~eKD~TD~e~Al~~a~~~-----g~~~I~i~ 99 (223)
T 3k94_A 25 VCWVGVDRGTMTLLEAGFRPVRAFGDFDSLPAEDVVKLQQAFPDLDVWPAEKDKTDMEIALDWAVEQ-----TARCIRLF 99 (223)
T ss_dssp EEEEEETTHHHHHHHHTCCCSEEESCGGGSCHHHHHHHHHHCTTCCEECCBTTBCHHHHHHHHHHTT-----CCSEEEEE
T ss_pred CEEEEECHHHHHHHHcCCCCCEEEeCcccCCHHHHHHHHhcCCeEEECCCcCCCCHHHHHHHHHHHc-----CCCEEEEE
Confidence 58999999876654 3677888888888888754 4788886666655554 45677777
Q ss_pred ecCc
Q 021654 76 CGTG 79 (309)
Q Consensus 76 CgtG 79 (309)
+++|
T Consensus 100 Ga~G 103 (223)
T 3k94_A 100 GATG 103 (223)
T ss_dssp SCSS
T ss_pred cCCC
Confidence 8877
No 411
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=21.66 E-value=1.6e+02 Score=24.78 Aligned_cols=77 Identities=13% Similarity=0.116 Sum_probs=49.2
Q ss_pred EEEEeCcccHHHHHHHHHHHHhCCCcEEEecC---CCCcchhHHHHHHhhcCCCCCCCceEEEEecCc----hhhhhhhc
Q 021654 15 IIAGADSFGAELKDALVSHLRSLNIDVEDLGT---SDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTG----VGVAIFAN 87 (309)
Q Consensus 15 i~i~~D~~g~~lk~~l~~~l~~~g~ev~d~G~---~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG----~G~~iaaN 87 (309)
|+.||+.. .+.-++..+.|++.|.+. |++. +.-|+--.+.++...+ ...+ ++|++.| +.-.+++|
T Consensus 17 IimGS~SD-~~v~~~a~~~L~~~Gi~~-ev~V~SaHR~p~~~~~~~~~a~~----~g~~--ViIa~AG~aa~LpgvvA~~ 88 (174)
T 3kuu_A 17 IVMGSKSD-WATMQFAADVLTTLNVPF-HVEVVSAHRTPDRLFSFAEQAEA----NGLH--VIIAGNGGAAHLPGMLAAK 88 (174)
T ss_dssp EEESSGGG-HHHHHHHHHHHHHTTCCE-EEEECCTTTCHHHHHHHHHHTTT----TTCS--EEEEEEESSCCHHHHHHHT
T ss_pred EEECcHHH-HHHHHHHHHHHHHcCCCE-EEEEEcccCCHHHHHHHHHHHHh----CCCc--EEEEECChhhhhHHHHHhc
Confidence 66667664 677788889999999763 5655 4466666666665443 2232 7777776 34566677
Q ss_pred CCCceEEEEeCC
Q 021654 88 KNPGVFATTCLT 99 (309)
Q Consensus 88 K~~giraa~~~~ 99 (309)
--.=|.+.-+..
T Consensus 89 t~~PVIgVP~~~ 100 (174)
T 3kuu_A 89 TLVPVLGVPVQS 100 (174)
T ss_dssp CSSCEEEEEECC
T ss_pred cCCCEEEeeCCC
Confidence 655566665543
No 412
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=21.65 E-value=1.5e+02 Score=21.70 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=24.9
Q ss_pred CCCCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 9 APHPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 9 ~~~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
....+||.|.-|+. ...+.+...|+..||+|.-
T Consensus 12 ~~~~~~ilivdd~~--~~~~~l~~~L~~~g~~v~~ 44 (138)
T 2b4a_A 12 HMQPFRVTLVEDEP--SHATLIQYHLNQLGAEVTV 44 (138)
T ss_dssp --CCCEEEEECSCH--HHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCeEEEECCCH--HHHHHHHHHHHHcCCEEEE
Confidence 34557899988885 5668889999999998764
No 413
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=21.65 E-value=1.9e+02 Score=25.46 Aligned_cols=62 Identities=11% Similarity=0.143 Sum_probs=38.9
Q ss_pred cEEEEE---eCcccHHHHHHHHHHHHhCCCcEEEecC-CCCcchhHHHHHHhhcCCCCCCCceEEEEecCch
Q 021654 13 LKIIAG---ADSFGAELKDALVSHLRSLNIDVEDLGT-SDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGV 80 (309)
Q Consensus 13 mki~i~---~D~~g~~lk~~l~~~l~~~g~ev~d~G~-~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~ 80 (309)
.||++- .|..|..+.+.+++.|++.|.+|+..-. .+..++...+.+.... + ..+|++++++.
T Consensus 150 ~~iaii~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~d~~~~~~~l~~~----~--~d~v~~~~~~~ 215 (366)
T 3td9_A 150 KRVVVFTDVEQDYSVGLSNFFINKFTELGGQVKRVFFRSGDQDFSAQLSVAMSF----N--PDAIYITGYYP 215 (366)
T ss_dssp CEEEEEEETTCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCCCHHHHHHHHHT----C--CSEEEECSCHH
T ss_pred cEEEEEEeCCCcHHHHHHHHHHHHHHHCCCEEEEEEeCCCCccHHHHHHHHHhc----C--CCEEEEccchh
Confidence 477776 3556777889999999999998875431 1234554444444333 2 34677767754
No 414
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=21.63 E-value=2.2e+02 Score=26.21 Aligned_cols=61 Identities=13% Similarity=0.023 Sum_probs=39.6
Q ss_pred cEEEEEeCcccHH---HHHHHHHHHHhCCCcEEEec-CCCCc--chhHHHHHHhhcCCCCCCCceEEEEec
Q 021654 13 LKIIAGADSFGAE---LKDALVSHLRSLNIDVEDLG-TSDYY--SIGAEVGRRVSSSDSSDTTTRGLVACG 77 (309)
Q Consensus 13 mki~i~~D~~g~~---lk~~l~~~l~~~g~ev~d~G-~~~y~--~~a~~va~~v~~~~~~~~~~~gi~~Cg 77 (309)
-|+.|-+|...+. +-+.+.+.|++.|+++.-|. ....| +...++.+.+.+ ..+|.-|.+-|
T Consensus 41 ~~~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~----~~~d~IIavGG 107 (371)
T 1o2d_A 41 KRALVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAVERYRN----DSFDFVVGLGG 107 (371)
T ss_dssp SEEEEEEESSGGGTSSHHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHHHHHTT----SCCSEEEEEES
T ss_pred CEEEEEECchHHhhccHHHHHHHHHHHcCCeEEEeCCccCCCCHHHHHHHHHHHHh----cCCCEEEEeCC
Confidence 3788888875544 67899999999998876553 12223 344666666665 55665554433
No 415
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=21.43 E-value=1.4e+02 Score=25.66 Aligned_cols=50 Identities=18% Similarity=0.089 Sum_probs=30.4
Q ss_pred CceEEEEEecEEEEEEee--CC---eEEEecCCcEEEEC---CCC--eEEEEEcCCceEE
Q 021654 233 FGHDLVVLQGKKSVWNLT--KG---ERFDLTVGDYLFTP---AGD--VHRVKYYEETEFF 282 (309)
Q Consensus 233 ~~e~vyVlsG~l~v~i~~--~~---~~~~L~pGD~v~IP---~g~--~H~~~n~gd~~~~ 282 (309)
...+++|++|.+.+.... ++ ....+.+||++=-- .+. ...+.+.+++.++
T Consensus 198 ~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~ 257 (299)
T 3shr_A 198 GDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWFGEKALQGEDVRTANVIAAEAVTCL 257 (299)
T ss_dssp ECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEECGGGGSSSEECSSEEEESSSEEEE
T ss_pred CCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEeChHHHhCCCCcceEEEECCCEEEE
Confidence 345688999999996442 22 24678999976211 122 2345666666654
No 416
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=21.35 E-value=67 Score=27.11 Aligned_cols=35 Identities=20% Similarity=0.182 Sum_probs=21.8
Q ss_pred CCcEEEEEeC-cccHHHHHHHHHHHHhCCCcEE-Eec
Q 021654 11 HPLKIIAGAD-SFGAELKDALVSHLRSLNIDVE-DLG 45 (309)
Q Consensus 11 ~~mki~i~~D-~~g~~lk~~l~~~l~~~g~ev~-d~G 45 (309)
++|||++.|| |.+.+.-+.+.+.++..+.+++ -.|
T Consensus 4 ~~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~G 40 (260)
T 2yvt_A 4 MPRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVG 40 (260)
T ss_dssp CCCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEES
T ss_pred ceEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECC
Confidence 4689999999 4555544555566654455544 444
No 417
>3esg_A HUTD, putative uncharacterized protein; beta barrel, unknown function; 1.80A {Pseudomonas fluorescens} SCOP: b.82.1.0
Probab=21.35 E-value=1.1e+02 Score=26.11 Aligned_cols=36 Identities=17% Similarity=0.047 Sum_probs=27.5
Q ss_pred eecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEEECCCCe
Q 021654 229 HHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDV 270 (309)
Q Consensus 229 H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~IP~g~~ 270 (309)
+.+....++|+++|.+++ . . ..|.+||.+++.....
T Consensus 139 ~~~a~~~lv~~~~G~~~v--~--~--~~L~~~D~L~~~~~~~ 174 (193)
T 3esg_A 139 FSTAQTVLVFSVADEVKV--L--G--EKLGHHDCLQVDGNAG 174 (193)
T ss_dssp EECCSEEEEEECSSCEEE--T--T--EEECTTCEEEECSCCS
T ss_pred cCCCCEEEEEEeeCCEEE--E--E--EecCCCCEEEEeCCcc
Confidence 344445569999999998 3 2 7999999999986554
No 418
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=21.32 E-value=2.3e+02 Score=22.48 Aligned_cols=66 Identities=6% Similarity=-0.017 Sum_probs=42.7
Q ss_pred CcEEEEEeCccc---HHHHHHHHHHHHhCCCcEEEecCCC-CcchhHHHHHHhhcCCCCCCCceEEEEecCc
Q 021654 12 PLKIIAGADSFG---AELKDALVSHLRSLNIDVEDLGTSD-YYSIGAEVGRRVSSSDSSDTTTRGLVACGTG 79 (309)
Q Consensus 12 ~mki~i~~D~~g---~~lk~~l~~~l~~~g~ev~d~G~~~-y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG 79 (309)
+..|+|.+ |.. -.|++.+...+.+..++.+|+...+ ..++-.++.+.+.+. .-...+-.|+++--|
T Consensus 4 ~igiiIvt-HG~s~A~~l~~~a~~i~G~~~~~aid~~~~~~~~~~~~~i~~~i~~~-~~d~g~GVLiL~DmG 73 (139)
T 3gdw_A 4 NVGVFVLM-HGDSTASSMLKTAQELLGTSIGTAMNMPLTMEVQTMYEQLRNQVITQ-KESLNNGILLLTDMG 73 (139)
T ss_dssp CCEEEEEE-ESSSHHHHHHHHHHHHHTCCCCEEEEECTTSCHHHHHHHHHHHHHTS-TGGGTTCEEEEECSG
T ss_pred ceeEEEEc-CCHHHHHHHHHHHHHHcCcccEEEEEccCCCCHHHHHHHHHHHHHhh-cCCCCCCEEEEEeCC
Confidence 34566655 544 5699988888877789999998864 446777888877640 001234455566554
No 419
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=21.07 E-value=1.5e+02 Score=21.17 Aligned_cols=29 Identities=14% Similarity=0.023 Sum_probs=23.7
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 13 LKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 13 mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
+||.|..|+. ...+.++..|+..||+|.-
T Consensus 4 ~~ilivdd~~--~~~~~l~~~l~~~~~~v~~ 32 (124)
T 1srr_A 4 EKILIVDDQS--GIRILLNEVFNKEGYQTFQ 32 (124)
T ss_dssp CEEEEECSCH--HHHHHHHHHHHTTTCEEEE
T ss_pred ceEEEEeCCH--HHHHHHHHHHHHCCcEEEE
Confidence 5899998885 5678888999989998863
No 420
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=21.06 E-value=2.5e+02 Score=20.49 Aligned_cols=32 Identities=16% Similarity=0.132 Sum_probs=25.6
Q ss_pred CCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEe
Q 021654 11 HPLKIIAGADSFGAELKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 11 ~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~ 44 (309)
.++||.|..|+. ...+.+++.|++.||+|.-+
T Consensus 5 ~~~~iLivdd~~--~~~~~l~~~l~~~g~~v~~~ 36 (140)
T 3grc_A 5 PRPRILICEDDP--DIARLLNLMLEKGGFDSDMV 36 (140)
T ss_dssp CCSEEEEECSCH--HHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCEEEEcCCH--HHHHHHHHHHHHCCCeEEEE
Confidence 347999999985 56788999999999997643
No 421
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=21.06 E-value=1.5e+02 Score=24.57 Aligned_cols=33 Identities=24% Similarity=0.305 Sum_probs=26.3
Q ss_pred CCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEEec
Q 021654 11 HPLKIIAGADSFGAELKDALVSHLRSLNIDVEDLG 45 (309)
Q Consensus 11 ~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d~G 45 (309)
++|||.|..|+. .+.+.|...|+..||+|.-+.
T Consensus 4 m~~~ILivdd~~--~~~~~l~~~L~~~g~~v~~~~ 36 (238)
T 2gwr_A 4 MRQRILVVDDDA--SLAEMLTIVLRGEGFDTAVIG 36 (238)
T ss_dssp CCCEEEEECSCH--HHHHHHHHHHHHTTCEEEEEC
T ss_pred ccCeEEEEeCCH--HHHHHHHHHHHHCCCEEEEEC
Confidence 346899999985 567889999999999987543
No 422
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=21.02 E-value=1.2e+02 Score=25.13 Aligned_cols=63 Identities=6% Similarity=0.091 Sum_probs=35.5
Q ss_pred EEEcCCCcCCCeecCCceEEEEEecEEEEEEee-CCeE---EEecCCcEEEECC----CC---eEEEEEcC-CceE
Q 021654 218 VRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLT-KGER---FDLTVGDYLFTPA----GD---VHRVKYYE-ETEF 281 (309)
Q Consensus 218 ~~l~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~-~~~~---~~L~pGD~v~IP~----g~---~H~~~n~g-d~~~ 281 (309)
.++++|...-..--+....++|++|.+.+.... +|+. ..+ |||++-..+ .. ++...... ++.+
T Consensus 21 ~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~~~~~v 95 (238)
T 2bgc_A 21 KQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVISEQATA 95 (238)
T ss_dssp EEEETTCEEECTTCCCCEEEEEEESEEEEEEECTTSCEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECSSEEEE
T ss_pred EEECCCCEEEeCCCCCceEEEEEecEEEEEEECCCCCEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEEcceEE
Confidence 345555554222223455788999999985432 2332 445 899874432 22 46777764 4444
No 423
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=21.01 E-value=2.6e+02 Score=25.11 Aligned_cols=45 Identities=11% Similarity=0.016 Sum_probs=27.3
Q ss_pred EEEEeCcccH----HHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHh
Q 021654 15 IIAGADSFGA----ELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRV 60 (309)
Q Consensus 15 i~i~~D~~g~----~lk~~l~~~l~~~g~ev~d~G~~~y~~~a~~va~~v 60 (309)
.+|.+-.+|- .+-+.+.++|++.|+++.-+-+ .++.-+...++..
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t-~~~~~a~~~~~~~ 76 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYAT-EKIGDATLEAERA 76 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEEC-CSTTHHHHHHHHH
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEe-cCcchHHHHHHHH
Confidence 4566666662 4557899999999988775533 2333333444433
No 424
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=20.89 E-value=65 Score=28.82 Aligned_cols=59 Identities=14% Similarity=0.146 Sum_probs=38.2
Q ss_pred ccHHHHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCCceEEEEecCchhhhhhhcC
Q 021654 22 FGAELKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGVAIFANK 88 (309)
Q Consensus 22 ~g~~lk~~l~~~l~~~g~ev~d~G~~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~~iaaNK 88 (309)
.+++|++.|.+.+ |..|.= +-.--+.++++...-. ..+..++..+..|||+|..|..|.
T Consensus 85 ~~~~l~~~l~~~~---~~pV~v----~NDanaaalaE~~~G~-~~~~~~~~~l~~GtGiG~gii~~G 143 (302)
T 3epq_A 85 RHYPFLQTVXNEM---XIPVGF----STDVNAAALGEFLFGE-AXGLDSCLYITIGTGIGAGAIVEG 143 (302)
T ss_dssp BTCCHHHHHHHHH---CSCEEE----EEHHHHHHHHHHHHST-TTTCSCEEEEEESSSEEEEEEETT
T ss_pred cCCChHHHHHHHh---CCCEEE----echhHHHHHHHHHhCC-CCCCCcEEEEEECCceEEEEEECC
Confidence 4678898888877 444430 0112445666665320 124567888999999999999984
No 425
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=20.86 E-value=2.4e+02 Score=22.60 Aligned_cols=38 Identities=21% Similarity=0.253 Sum_probs=23.2
Q ss_pred cEEEEEeCcc----cHH--HHHHHHHHHHhCC--C--cEEEecCCCCc
Q 021654 13 LKIIAGADSF----GAE--LKDALVSHLRSLN--I--DVEDLGTSDYY 50 (309)
Q Consensus 13 mki~i~~D~~----g~~--lk~~l~~~l~~~g--~--ev~d~G~~~y~ 50 (309)
|||.+..-|. |.. |-+.+.+.|++.| + +++|+...++|
T Consensus 2 mkilii~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl~~~~~p 49 (201)
T 1t5b_A 2 SKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDLAANPVP 49 (201)
T ss_dssp CEEEEEECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEETTTSCCC
T ss_pred CeEEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCCC
Confidence 6765554432 444 5578888888765 4 55677654443
No 426
>1req_B Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 1e1c_B* 2req_B* 3req_B* 4req_B* 5req_B* 6req_B* 7req_B*
Probab=20.75 E-value=66 Score=32.61 Aligned_cols=60 Identities=10% Similarity=0.052 Sum_probs=36.1
Q ss_pred CCcEEEEEe--CcccHH-HHHHHHHHHHhCCCcEEEecCCCCcchhHHHHHHhhcCCCCCCCceEEEEecCc
Q 021654 11 HPLKIIAGA--DSFGAE-LKDALVSHLRSLNIDVEDLGTSDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTG 79 (309)
Q Consensus 11 ~~mki~i~~--D~~g~~-lk~~l~~~l~~~g~ev~d~G~~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG 79 (309)
.+.|++|+. ..++.+ =|+.+...|+..|+||+|.|.+ .+ ..+++++.+ ..+ ..|.+|++=
T Consensus 508 ~~~kvvLatLg~Da~Hd~ga~~va~~l~~aGfeVi~~g~~--~t--ee~v~aa~e----~~a-div~lSsl~ 570 (637)
T 1req_B 508 ERPKVFLACLGTRRDFGGREGFSSPVWHIAGIDTPQVEGG--TT--AEIVEAFKK----SGA-QVADLCSSA 570 (637)
T ss_dssp SCCBCEEEECSCHHHHHHHHHHHHHHHHHTTCBCCEEECC--CH--HHHHHHHHH----HTC-SEEEEECCH
T ss_pred chhhhhHhhhCCchhhhhhHHHHHHHHHhCCeeEEeCCCC--CC--HHHHHHHHh----cCC-CEEEEeccc
Confidence 344666663 222333 3566777899999999999763 22 555555544 222 367777664
No 427
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=20.64 E-value=2.1e+02 Score=20.89 Aligned_cols=31 Identities=16% Similarity=0.091 Sum_probs=24.8
Q ss_pred CCcEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 11 HPLKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 11 ~~mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
+.+||.|.-|+. ...+.+...|+..|++|.-
T Consensus 6 ~~~~ILivdd~~--~~~~~l~~~L~~~g~~v~~ 36 (136)
T 1dcf_A 6 TGLKVLVMDENG--VSRMVTKGLLVHLGCEVTT 36 (136)
T ss_dssp TTCEEEEECSCH--HHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEEeCCH--HHHHHHHHHHHHcCCeEEE
Confidence 457999998885 4567888999999998863
No 428
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=20.61 E-value=95 Score=32.54 Aligned_cols=62 Identities=21% Similarity=0.169 Sum_probs=37.5
Q ss_pred cCCCcCCCeecCCceEEEEEecEEEEEEeeCCeEEEecCCcEEE---ECCCCeEE--EEEcC-CceEE
Q 021654 221 KAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLF---TPAGDVHR--VKYYE-ETEFF 282 (309)
Q Consensus 221 ~pG~~~p~H~H~~~e~vyVlsG~l~v~i~~~~~~~~L~pGD~v~---IP~g~~H~--~~n~g-d~~~~ 282 (309)
++|..+-..--....+++|++|.+.+....++....|++||++= +--+.|+. +++.. ++.++
T Consensus 367 kaGtvI~rQGE~gds~YIIlsG~V~V~~~~~~~v~~L~~Gd~FGElALL~~~PR~aTV~a~~d~c~fl 434 (999)
T 4f7z_A 367 KGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFL 434 (999)
T ss_dssp STTCEEECTTSBCCEEEEEEESEEEEEETTTEEEEEEETTCEECGGGGTCSCBCSSEEEESSSSEEEE
T ss_pred cCCCEEEeCCCcCCeEEEEEeeEEEEEEcCCcceEEecCCCcccchhhccCCCeeEEEEEecCceEEE
Confidence 34555433333456678899999998543334578899999862 22345653 45544 35553
No 429
>3d8t_A Uroporphyrinogen-III synthase; heme biosynthesis, lyase; 1.60A {Thermus thermophilus} PDB: 3d8r_A 3d8s_A 3d8n_A
Probab=20.33 E-value=3.2e+02 Score=23.71 Aligned_cols=107 Identities=10% Similarity=-0.086 Sum_probs=59.6
Q ss_pred EEEEEe-CcccHHHHHHHHHHHHhCCCcEEEecCCCC-cch--hHHHHHHhhcCCCCCCCceEEEEecCchhhhhhhcCC
Q 021654 14 KIIAGA-DSFGAELKDALVSHLRSLNIDVEDLGTSDY-YSI--GAEVGRRVSSSDSSDTTTRGLVACGTGVGVAIFANKN 89 (309)
Q Consensus 14 ki~i~~-D~~g~~lk~~l~~~l~~~g~ev~d~G~~~y-~~~--a~~va~~v~~~~~~~~~~~gi~~CgtG~G~~iaaNK~ 89 (309)
||.+-. +.. .+.|.+.|++.|++|..+=.+.. ++. ...+.+.+.. +..| +++-.|..++......+
T Consensus 158 ~vLi~r~~~~----~~~L~~~L~~~G~~v~~~~~Y~~~~~~~~~~~~~~~l~~----~~~d--~v~FtS~~~v~~~~~~~ 227 (286)
T 3d8t_A 158 VAALQLYGKP----LPLLENALAERGYRVLPLMPYRHLPDPEGILRLEEAVLR----GEVD--ALAFVAAIQVEFLFEGA 227 (286)
T ss_dssp EEEEECSSSC----CHHHHHHHHHTTCEEEEECSEEEEECHHHHHHHHHHHHT----TCCS--EEEESSHHHHHHHHHHC
T ss_pred eEEEEccCcc----cHHHHHHHHHCCCEEEEEEEEEEecCcccHHHHHHHHHc----CCCC--EEEEECHHHHHHHHHHH
Confidence 676654 433 35688889999999999887531 222 2445556665 5555 44445555554433222
Q ss_pred ----------C-ceEEEEeCCHHHHHHhHhhcCceEeEeccccCCHHHHHHHHH
Q 021654 90 ----------P-GVFATTCLTPADALNTRSINNCNVLAVSGMSTSKESAVEILD 132 (309)
Q Consensus 90 ----------~-giraa~~~~~~~A~~~r~hN~aNvl~lg~~~~~~~~a~~i~~ 132 (309)
. +++ ..|-.+.+|+.++++. -++.....+.....++..|.+
T Consensus 228 ~~~~~~~~~l~~~~~-i~aIG~~TA~al~~~G-~~~~~~a~~~~~~~L~~~l~~ 279 (286)
T 3d8t_A 228 KDPKALREALNTRVK-ALAVGRVTADALREWG-VKPFYVDETERLGSLLQGFKR 279 (286)
T ss_dssp SCHHHHHHHHTTTSE-EEEESHHHHHHHHHTT-CCCSEEECSSCHHHHHHHHHH
T ss_pred HhccchhhHhhcCCE-EEEECHHHHHHHHHcC-CCceEEeCCCCHHHHHHHHHH
Confidence 2 443 4555667777776653 333344445444444444443
No 430
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=20.28 E-value=1.7e+02 Score=20.52 Aligned_cols=29 Identities=14% Similarity=0.311 Sum_probs=23.4
Q ss_pred cEEEEEeCcccHHHHHHHHHHHHhCCCcEEE
Q 021654 13 LKIIAGADSFGAELKDALVSHLRSLNIDVED 43 (309)
Q Consensus 13 mki~i~~D~~g~~lk~~l~~~l~~~g~ev~d 43 (309)
+||.|..|+. ...+.+...|+..||+|.-
T Consensus 2 ~~ilivdd~~--~~~~~l~~~l~~~~~~v~~ 30 (116)
T 3a10_A 2 KRILVVDDEP--NIRELLKEELQEEGYEIDT 30 (116)
T ss_dssp CEEEEECSCH--HHHHHHHHHHHHTTCEEEE
T ss_pred cEEEEEeCCH--HHHHHHHHHHHHCCCEEEE
Confidence 5799988885 4667888899989998873
No 431
>3hjn_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynth nucleotide-binding, transferase, structural genomics; HET: ADP TYD; 2.10A {Thermotoga maritima}
Probab=20.17 E-value=1.9e+02 Score=23.84 Aligned_cols=27 Identities=22% Similarity=0.105 Sum_probs=22.9
Q ss_pred EeCcccHH-HHHHHHHHHHhCCCcEEEe
Q 021654 18 GADSFGAE-LKDALVSHLRSLNIDVEDL 44 (309)
Q Consensus 18 ~~D~~g~~-lk~~l~~~l~~~g~ev~d~ 44 (309)
|.|-+|-. +-+.|.++|+++|++|+-.
T Consensus 7 G~DGsGKsTq~~~L~~~L~~~g~~v~~t 34 (197)
T 3hjn_A 7 GIDGSGKSTQIQLLAQYLEKRGKKVILK 34 (197)
T ss_dssp CSTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCcEEEE
Confidence 88999976 5578999999999999854
No 432
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=20.04 E-value=29 Score=33.58 Aligned_cols=107 Identities=12% Similarity=0.041 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHhCCCcE--EEecCCCCcchhHHHHHHhhcCCCCCCCceEEEEecCchhhhhhhc-----CC--------
Q 021654 25 ELKDALVSHLRSLNIDV--EDLGTSDYYSIGAEVGRRVSSSDSSDTTTRGLVACGTGVGVAIFAN-----KN-------- 89 (309)
Q Consensus 25 ~lk~~l~~~l~~~g~ev--~d~G~~~y~~~a~~va~~v~~~~~~~~~~~gi~~CgtG~G~~iaaN-----K~-------- 89 (309)
++++.|.+.|+++|..| +=+. -.-.+..+++.-. +....--++.|||+|.++..| |+
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~---NDa~~tll~e~~~-----~~~~~iglilGTGvgg~~i~~~~~i~kl~~~~~~~~ 235 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADI---XDSHGILXXVNYT-----DAXIKMGIIFGSGVNAAYWCDSTXIGDAADGGXXGG 235 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEE---CHHHHHHHHHHHH-----CTTEEEEEEESSSEEEEEEECGGGSSCTTSCSSSCS
T ss_pred HHHHHHHHhHhhcCCcceeEEEE---ecchhhccchhhc-----CCccEEEEEECcEEEEEEEECCCccccccccccccc
Confidence 88899999997766552 2221 1235666777664 455677778899999999999 66
Q ss_pred CceEEEEe-------------CCHHHHHHhHhhcCceEeEe----ccccCCHHHHHHHHHHHHcCC--CCC
Q 021654 90 PGVFATTC-------------LTPADALNTRSINNCNVLAV----SGMSTSKESAVEILDTWLKTP--FKA 141 (309)
Q Consensus 90 ~giraa~~-------------~~~~~A~~~r~hN~aNvl~l----g~~~~~~~~a~~i~~~~l~~~--f~~ 141 (309)
.|-.+..+ .++++-.+=+...|+. =|+ +++.+| ++++.++..+.... |.+
T Consensus 236 ~g~~~in~EwG~f~~~~~~lp~t~~D~~lD~~s~~pG-q~fEkm~SG~yLG-el~R~il~~~~~~~~lf~~ 304 (457)
T 2yhx_A 236 AGXMXICCDQSSFRKAFPSLPQIXYLXTLNXXSPXAX-KTFXKNSXAKNXG-QSLRDVLMXFKXXGQXHXX 304 (457)
T ss_dssp SCCEEEECCCTTTTTTCSSSCCCHHHHHHHHHSSCSC-CHHHHHHCGGGHH-HHHHHHHHHHHHTTSSSSS
T ss_pred CCceEEEEEcccCCCCCCcCCccccccccccccCchH-HHHHHHhhhcCcH-HHHHHHHHHHhcccccccc
Confidence 23333333 3566666666666665 354 555666 45555665554432 654
Done!